HHsearch alignment for GI: 254780170 and conserved domain: TIGR02285
>TIGR02285 TIGR02285 conserved hypothetical protein; InterPro: IPR011972 Members of this family are found in several Proteobacteria, including Pseudomonas putida (strain KT2440), Bdellovibrio bacteriovorus HD100 (three members), Aeromonas hydrophila, and Chromobacterium violaceum ATCC 12472. The function is unknown..
Probab=92.86 E-value=0.82 Score=25.44 Aligned_cols=202 Identities=14% Similarity=0.084 Sum_probs=114.5
Q ss_pred EEEEEEECCCCCCEEECCC------CCEEEEHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHCCCEEEEEECCCCCC
Q ss_conf 4999871789883068898------9880150999999999967982202599814310026774396279981243253
Q gi|254780170|r 35 FLKCGINTGLVGFAEVKAN------GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 (342)
Q Consensus 35 ~L~vGv~~~~ppfs~~d~~------G~~~GfDVDl~raiAaal~gd~~kVe~v~~~~~~rf~aL~sG~vDil~~~~T~T~ 108 (342)
T Consensus 20 ~I~W-~~~D~PPf~I~~G~Gmmvdi~~grG~~D~~~~~i~r~-lP~-Y~H~~~~~~~aR~~~~~Q~~~~~~C~~~ll~TP 96 (293)
T TIGR02285 20 AITW-IVSDLPPFFIFDGPGMMVDIKKGRGVLDVVLKLIRRK-LPE-YEHRIVRVSVARSLKMLQQGKAVVCDVNLLKTP 96 (293)
T ss_pred CCEE-EEECCCCEEEEECCCEEEEECCCCCCCHHHHHHHHHH-CCC-CCCEEEEEEHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 1115-1114787268708802897316887203367999983-654-751389986678999986388602155144786
Q ss_pred CCHHCCCCCCC--CCCCCC-CEEEEEECCCC--CC--------CHHHH---CCCCEEEEECCCHHHHHHHHHHHCCCC--
Q ss_conf 20110278435--322344-02346302113--47--------53641---786203431342699999999862998--
Q gi|254780170|r 109 LREISLGLAFR--PITYFD-GQGFIMHKKKG--IS--------SVSQL---SGASICVQAGTTTELTLADYFKAHNMK-- 170 (342)
Q Consensus 109 ~Rd~~~~v~Fs--~~~~~d-gq~~lVrk~~~--i~--------s~~dL---~G~~I~v~~GTT~e~~l~~~~~~~~~~-- 170 (342)
T Consensus 97 EReK~--~~Fstf~~~~~~~p~glv~~~~~~~~~~~~~~G~~VdL~~Ll~~~~~~~~~~a~RsYg~~ID~~L~~~~~~~~ 174 (293)
T TIGR02285 97 EREKF--LIFSTFDPTLVVLPVGLVLRKELAAEVRDLADGDDVDLKKLLASKKLRLGVIASRSYGAQIDDILKDKKDKKN 174 (293)
T ss_pred CHHHH--EECCHHHHHHHHCCCCEEECCCCCCCCCHHCCCCCHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHCCCCCC
T ss_conf 15432--0001247898647842365222232351120676101788731888644788630115789999973689624
Q ss_pred CCEEEECCHHH-HHHHHHCCCEEEEEECCHHHHH-HH-------------HHCCCCHHHCCCCCCCCCCCEEEECCCCCH
Q ss_conf 50787479899-9999873960299825047999-99-------------836780010025644423710100027775
Q gi|254780170|r 171 YHPIVFERVEE-IDAAYRAHRCDAYTGDISALYA-LK-------------LTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 (342)
Q Consensus 171 ~~~v~~~~~~~-a~~al~~Gr~DA~~~D~s~La~-~~-------------~~~~~p~~~~il~e~iskEPlg~avr~gD~ 235 (342)
T Consensus 175 ~~~~~n~~~~nGl~~mL~~~R~~~tL~Y~~E~~Yy~~skfGyGsstvsdl~~~~~~~~~~~lpv~g~~~~i~v~vaCpkt 254 (293)
T TIGR02285 175 SRVIGNAASGNGLFKMLEKGRVQYTLAYPPEVVYYEESKFGYGSSTVSDLQKKGALAPLKFLPVAGVAAEISVVVACPKT 254 (293)
T ss_pred CCEECCCCCHHHHHHHHHCCCCCEEECCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEEECCC
T ss_conf 22205553035799997524333031452332444431145551468888724577881264004777677899840888
Q ss_pred HHHHHH
Q ss_conf 799998
Q gi|254780170|r 236 EWYNIV 241 (342)
Q Consensus 236 ~w~d~V 241 (342)
T Consensus 255 ~wG~~~ 260 (293)
T TIGR02285 255 EWGRKV 260 (293)
T ss_pred HHHHHH
T ss_conf 778999