HHsearch alignment for GI: 254780170 and conserved domain: TIGR02995
>TIGR02995 ectoine_ehuB ectoine/hydroxyectoine ABC transporter solute-binding protein; InterPro: IPR014337 Members of this entry are the extracellular solute-binding proteins of ABC transporters and they closely resemble amino acid transporters. The member from Sinorhizobium meliloti (Rhizobium meliloti) is involved in ectoine uptake, both for osmoprotection and for catabolism. All other members of the seed alignment are found associated with ectoine catabolic genes..
Probab=99.94 E-value=8.7e-26 Score=183.65 Aligned_cols=245 Identities=18% Similarity=0.236 Sum_probs=196.9
Q ss_pred HHHHHHHHHHCCCCCHHHHHHHHCCEEEEEEECCCCCCEEECCCCCEEEEHHHHHHHHHHHHCCCCCEEEEEECCCCCCH
Q ss_conf 99999998401244216899985794999871789883068898988015099999999996798220259981431002
Q gi|254780170|r 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 (342)
Q Consensus 10 l~l~~~~~~~~aa~a~tLd~Vk~rG~L~vGv~~~~ppfs~~d~~G~~~GfDVDl~raiAaal~gd~~kVe~v~~~~~~rf 89 (342)
T Consensus 10 al~aia~~~~~aa~a~~LeelKeQG~~Ria~ANE-~Pf~y~g~DGkv~G~~PdvA~aifK~lGi--~dVn~~~te~G~lI 86 (285)
T TIGR02995 10 ALAAIAAVAVAAADALTLEELKEQGFVRIAIANE-VPFAYVGADGKVAGAAPDVARAIFKRLGI--KDVNASVTEYGALI 86 (285)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC-CCCCCCCCCCCCCCCCHHHHHHHHHHCCC--EEEEEEECCCCCCC
T ss_conf 9999998757547552157552353047740067-86400268853136855789999985481--10000035640314
Q ss_pred HHHHCCCEEEEEECCCCCCCCHHCCCCCCCCCCCCCCEEEEEECCC--CCCCHHHHC---CCCEEEEECCCHHHHHHHHH
Q ss_conf 6774396279981243253201102784353223440234630211--347536417---86203431342699999999
Q gi|254780170|r 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLS---GASICVQAGTTTELTLADYF 164 (342)
Q Consensus 90 ~aL~sG~vDil~~~~T~T~~Rd~~~~v~Fs~~~~~dgq~~lVrk~~--~i~s~~dL~---G~~I~v~~GTT~e~~l~~~~ 164 (342)
T Consensus 87 PGL~AgRfDaiaAg~~i~PeR--CkqVaft~P~~~~~eallvkKGNPk~L~sY~DiAknP~~K~a~~~G~~e~~----~a 160 (285)
T TIGR02995 87 PGLKAGRFDAIAAGLFIKPER--CKQVAFTEPILSLAEALLVKKGNPKELKSYKDIAKNPEVKVAVVAGAVEVK----YA 160 (285)
T ss_pred CCCCCCHHHHHHHCCCCCHHH--HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCEEEECCCCHHHH----HH
T ss_conf 541010256886115788566--646440688644755211258788887752020068231276124723789----99
Q ss_pred HHCCCC-CCEEEECCHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCHHHCCCC---CCCCCCCE-----EEECCCCCH
Q ss_conf 862998-507874798999999873960299825047999998367800100256---44423710-----100027775
Q gi|254780170|r 165 KAHNMK-YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP---DIISKSPL-----APAIIQGDT 235 (342)
Q Consensus 165 ~~~~~~-~~~v~~~~~~~a~~al~~Gr~DA~~~D~s~La~~~~~~~~p~~~~il~---e~iskEPl-----g~avr~gD~ 235 (342)
T Consensus 161 r~~GVk~eqi~~vPd~~~~l~~vq~~RaDay~~t~Lt~~~La~K~gd~nVE~~~pfvdPvvkdaPv~i~ygg~AFRpeDk 240 (285)
T TIGR02995 161 REAGVKEEQIVVVPDTASALKAVQDKRADAYAATELTVKDLAKKAGDANVEVLAPFVDPVVKDAPVRINYGGLAFRPEDK 240 (285)
T ss_pred HHCCCCCCEEEEECCCHHHHHHHHHHCCCEECCCCCCHHHHHHHCCCCCCEECCCCCCCCCCCCCCEECCCCCCCCCCCH
T ss_conf 86589866078824871678887740342200332347889853389762000432153105887341167201166667
Q ss_pred HHHHHHHHHHHHHHHHHHH-------HCCHHHHHH
Q ss_conf 7999988774433112123-------301520898
Q gi|254780170|r 236 EWYNIVSWTHYAMVTAEEL-------GITQKNINQ 263 (342)
Q Consensus 236 ~w~d~V~W~~~ali~Aee~-------git~~nv~~ 263 (342)
T Consensus 241 eLRDafn~~L~k~~~s~e~~Ki~apyGfs~~~~~~ 275 (285)
T TIGR02995 241 ELRDAFNVELAKLKESDEFKKIVAPYGFSKKALAA 275 (285)
T ss_pred HHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHH
T ss_conf 77879989999862465401122136888889987