HHsearch results for GI: 254780170 and protein with PDBid: 1i6a_A
>1i6a_A OXYR, hydrogen peroxide-inducible genes activator; OXYR regulatory domain, oxidized form, transcription; 2.30A {Escherichia coli} SCOP: c.94.1.1 PDB: 1i69_A
Probab=92.00 E-value=0.13 Score=29.17 Aligned_cols=179 Identities=9% Similarity=0.057 Sum_probs=105.8
Q ss_pred CCEEEEEEECCCCCCEEECCCCCEEEEHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHCCCEEEEEECCCCCCCCHH
Q ss_conf 79499987178988306889898801509999999999679822025998143100267743962799812432532011
Q gi|254780170|r 33 RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 (342)
Q Consensus 33 rG~L~vGv~~~~ppfs~~d~~G~~~GfDVDl~raiAaal~gd~~kVe~v~~~~~~rf~aL~sG~vDil~~~~T~T~~Rd~ 112 (342)
+|.|++|+.+....+ +=.++.+.+.++- - ..++++...++.+.+..|.+|++|+.+..... .
T Consensus 4 ~G~lrIg~~~~~~~~-----------~lp~~l~~f~~~~-P-~v~i~i~~~~~~~l~~~l~~~~~d~~~~~~~~---~-- 65 (219)
T 1i6a_A 4 SGPLHIGLIPTVGPY-----------LLPHIIPMLHQTF-P-KLEMYLHEAQTHQLLAQLDSGKLDAVILALVK---E-- 65 (219)
T ss_dssp CEEEEEEECTTTHHH-----------HHHHHHHHHHHHC-T-TEEEEEEECCHHHHHHHHHHTSCSEEEEECCG---G--
T ss_pred EEEEEEEEEHHHHHH-----------HHHHHHHHHHHHC-C-CCEEEEEECCCHHHHHHHHCCCCHHHHCCCCC---C--
T ss_conf 189999837779999-----------9999999999988-8-96899998884888888753640101023553---2--
Q ss_pred CCCCCCCCCCCCCCEEEEEECCCC-----CCCHHHHCCCCEEEE-ECCCHHHHHHHHHHHCCCCCCEE-EECCHHHHHHH
Q ss_conf 027843532234402346302113-----475364178620343-13426999999998629985078-74798999999
Q gi|254780170|r 113 SLGLAFRPITYFDGQGFIMHKKKG-----ISSVSQLSGASICVQ-AGTTTELTLADYFKAHNMKYHPI-VFERVEEIDAA 185 (342)
Q Consensus 113 ~~~v~Fs~~~~~dgq~~lVrk~~~-----i~s~~dL~G~~I~v~-~GTT~e~~l~~~~~~~~~~~~~v-~~~~~~~a~~a 185 (342)
..++.+. +.+.+...++++++.. .-+++||....+... .+......+..++.+.+...+++ .+++...+...
T Consensus 66 ~~~~~~~-~l~~~~~~~v~~~~hpla~~~~i~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 144 (219)
T 1i6a_A 66 SEAFIEV-PLFDEPMLLAIYEDHPWANREAVPMADLAGEKLLMLEDGHCLRDQAMGFCFEAGADEDTHFRATSLETLRNM 144 (219)
T ss_dssp GTTSEEE-EEEEEEEEEEEETTSGGGGCSCEEGGGGTTSEEECCTTTTCSSCTTSSCSSCTTSEEECTTTTSCHHHHHHH
T ss_pred CCCCCCC-CCCCCCEEEEEECCCHHHCCCCCCHHHHHCCCEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCHHHHHHH
T ss_conf 3453234-344553699992597111699989899804768984587531567778999738998704774899999999
Q ss_pred HHCCCEEEEEECCHHHHHHHHHCCCCHHHCCCC--CCCCCCCEEEECCCCCH
Q ss_conf 873960299825047999998367800100256--44423710100027775
Q gi|254780170|r 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILP--DIISKSPLAPAIIQGDT 235 (342)
Q Consensus 186 l~~Gr~DA~~~D~s~La~~~~~~~~p~~~~il~--e~iskEPlg~avr~gD~ 235 (342)
..+|..=++.-+... . .....+..+.+| +..-+-+++.+.|++.+
T Consensus 145 v~~g~gi~~lp~~~~----~-~~~~~~~l~~l~~~~~~~~~~~~lv~~~~~~ 191 (219)
T 1i6a_A 145 VAAGSGITLLPALAV----P-PERKRDGVVYLPAIKPEPRRTIGLVYRPGSP 191 (219)
T ss_dssp HHTTSCBEEEEGGGS----C-SSSEETTEEEECEESSCCEEEEEEEECTTCT
T ss_pred HHHCCEEEEECHHHH----H-HHHHCCCEEEEECCCCCCEEEEEEEEECCCC
T ss_conf 980998999038999----7-5510798899988899853599999979196