HHsearch results for GI: 254780170 and protein with PDBid: 1i6a_A

>1i6a_A OXYR, hydrogen peroxide-inducible genes activator; OXYR regulatory domain, oxidized form, transcription; 2.30A {Escherichia coli} SCOP: c.94.1.1 PDB: 1i69_A
Probab=92.00  E-value=0.13  Score=29.17  Aligned_cols=179  Identities=9%  Similarity=0.057  Sum_probs=105.8

Q ss_pred             CCEEEEEEECCCCCCEEECCCCCEEEEHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHCCCEEEEEECCCCCCCCHH
Q ss_conf             79499987178988306889898801509999999999679822025998143100267743962799812432532011
Q gi|254780170|r   33 RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI  112 (342)
Q Consensus        33 rG~L~vGv~~~~ppfs~~d~~G~~~GfDVDl~raiAaal~gd~~kVe~v~~~~~~rf~aL~sG~vDil~~~~T~T~~Rd~  112 (342)
                      +|.|++|+.+....+           +=.++.+.+.++- - ..++++...++.+.+..|.+|++|+.+.....   .  
T Consensus         4 ~G~lrIg~~~~~~~~-----------~lp~~l~~f~~~~-P-~v~i~i~~~~~~~l~~~l~~~~~d~~~~~~~~---~--   65 (219)
T 1i6a_A            4 SGPLHIGLIPTVGPY-----------LLPHIIPMLHQTF-P-KLEMYLHEAQTHQLLAQLDSGKLDAVILALVK---E--   65 (219)
T ss_dssp             CEEEEEEECTTTHHH-----------HHHHHHHHHHHHC-T-TEEEEEEECCHHHHHHHHHHTSCSEEEEECCG---G--
T ss_pred             EEEEEEEEEHHHHHH-----------HHHHHHHHHHHHC-C-CCEEEEEECCCHHHHHHHHCCCCHHHHCCCCC---C--
T ss_conf             189999837779999-----------9999999999988-8-96899998884888888753640101023553---2--


Q ss_pred             CCCCCCCCCCCCCCEEEEEECCCC-----CCCHHHHCCCCEEEE-ECCCHHHHHHHHHHHCCCCCCEE-EECCHHHHHHH
Q ss_conf             027843532234402346302113-----475364178620343-13426999999998629985078-74798999999
Q gi|254780170|r  113 SLGLAFRPITYFDGQGFIMHKKKG-----ISSVSQLSGASICVQ-AGTTTELTLADYFKAHNMKYHPI-VFERVEEIDAA  185 (342)
Q Consensus       113 ~~~v~Fs~~~~~dgq~~lVrk~~~-----i~s~~dL~G~~I~v~-~GTT~e~~l~~~~~~~~~~~~~v-~~~~~~~a~~a  185 (342)
                      ..++.+. +.+.+...++++++..     .-+++||....+... .+......+..++.+.+...+++ .+++...+...
T Consensus        66 ~~~~~~~-~l~~~~~~~v~~~~hpla~~~~i~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  144 (219)
T 1i6a_A           66 SEAFIEV-PLFDEPMLLAIYEDHPWANREAVPMADLAGEKLLMLEDGHCLRDQAMGFCFEAGADEDTHFRATSLETLRNM  144 (219)
T ss_dssp             GTTSEEE-EEEEEEEEEEEETTSGGGGCSCEEGGGGTTSEEECCTTTTCSSCTTSSCSSCTTSEEECTTTTSCHHHHHHH
T ss_pred             CCCCCCC-CCCCCCEEEEEECCCHHHCCCCCCHHHHHCCCEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCHHHHHHH
T ss_conf             3453234-344553699992597111699989899804768984587531567778999738998704774899999999


Q ss_pred             HHCCCEEEEEECCHHHHHHHHHCCCCHHHCCCC--CCCCCCCEEEECCCCCH
Q ss_conf             873960299825047999998367800100256--44423710100027775
Q gi|254780170|r  186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILP--DIISKSPLAPAIIQGDT  235 (342)
Q Consensus       186 l~~Gr~DA~~~D~s~La~~~~~~~~p~~~~il~--e~iskEPlg~avr~gD~  235 (342)
                      ..+|..=++.-+...    . .....+..+.+|  +..-+-+++.+.|++.+
T Consensus       145 v~~g~gi~~lp~~~~----~-~~~~~~~l~~l~~~~~~~~~~~~lv~~~~~~  191 (219)
T 1i6a_A          145 VAAGSGITLLPALAV----P-PERKRDGVVYLPAIKPEPRRTIGLVYRPGSP  191 (219)
T ss_dssp             HHTTSCBEEEEGGGS----C-SSSEETTEEEECEESSCCEEEEEEEECTTCT
T ss_pred             HHHCCEEEEECHHHH----H-HHHHCCCEEEEECCCCCCEEEEEEEEECCCC
T ss_conf             980998999038999----7-5510798899988899853599999979196