HHsearch results for GI: 254780170 and protein with PDBid: 1lst_A
>1lst_A Lysine, arginine, ornithine-binding protein; amino-acid binding protein; HET: LYS; 1.80A {Salmonella typhimurium} SCOP: c.94.1.1 PDB: 2lao_A 1lag_E* 1lah_E 1laf_E 1hsl_A* 1hpb_P*
Probab=99.97 E-value=1.1e-29 Score=206.90 Aligned_cols=210 Identities=19% Similarity=0.215 Sum_probs=175.0
Q ss_pred CEEEEEEECCCCCCEEECCCCCEEEEHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHCCCEEEEEECCCCCCCCHHC
Q ss_conf 94999871789883068898988015099999999996798220259981431002677439627998124325320110
Q gi|254780170|r 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 (342)
Q Consensus 34 G~L~vGv~~~~ppfs~~d~~G~~~GfDVDl~raiAaal~gd~~kVe~v~~~~~~rf~aL~sG~vDil~~~~T~T~~Rd~~ 113 (342)
.+||||+..++|||+|.|++|+++||++|+++++|+.++ .+++|++.+|..++.++.+|++|+++++.++|.+|..
T Consensus 4 ~tirv~~~~~~pP~~~~d~~g~~~G~~~Dl~~~ia~~lg---~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~eR~~- 79 (239)
T 1lst_A 4 QTVRIGTDTTYAPFSSKDAKGEFIGFDIDLGNEMCKRMQ---VKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQ- 79 (239)
T ss_dssp SEEEEEECSCBTTTBEECTTCCEESHHHHHHHHHHHHHT---CEEEEEECCGGGHHHHHHTTSCSEECSSCBCCHHHHH-
T ss_pred CEEEEEECCCCCCCEEECCCCCEEEHHHHHHHHHHHHHC---CCEEEEEECCHHHHHHHHCCCCCEEEECCCCCHHHHH-
T ss_conf 869999899978925899999888709999999999959---9689998030767899866876789967879978985-
Q ss_pred CCCCCCCCCCCCCEEEEEECCCC-CCCHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCCEE
Q ss_conf 27843532234402346302113-47536417862034313426999999998629985078747989999998739602
Q gi|254780170|r 114 LGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 (342)
Q Consensus 114 ~~v~Fs~~~~~dgq~~lVrk~~~-i~s~~dL~G~~I~v~~GTT~e~~l~~~~~~~~~~~~~v~~~~~~~a~~al~~Gr~D 192 (342)
.+.|+.||++....+++++++. +++++||+|++||+..|++.+..+...+... .++++.+++..+++.++.+|++|
T Consensus 80 -~~~~s~p~~~~~~~~~~~~~~~~~~~~~dL~~~~i~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~g~vD 156 (239)
T 1lst_A 80 -EIAFSDKLYAADSRLIAAKGSPIQPTLESLKGKHVGVLQGSTQEAYANDNWRTK--GVDVVAYANQDLIYSDLTAGRLD 156 (239)
T ss_dssp -HCEECSCSBCCCEEEEEETTCCCCSSHHHHTTCEEEEETTSHHHHHHHHHTGGG--TCEEEEESSHHHHHHHHHTTSCS
T ss_pred -HCCCCCCEEECCCCCCCCCCCCCCCCHHHHCCCEEEEECCCHHHHHHHHHHCCC--EEEEEEECCHHHHHHHHHCCCEE
T ss_conf -201357457414311001588767997896899899985752776666541331--02356308989999999849713
Q ss_pred EEEECCHHHHHHHHHCCCCHHHCCC-----CCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHH
Q ss_conf 9982504799999836780010025-----644423710100027775799998877443311
Q gi|254780170|r 193 AYTGDISALYALKLTNDRPSEHVIL-----PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 (342)
Q Consensus 193 A~~~D~s~La~~~~~~~~p~~~~il-----~e~iskEPlg~avr~gD~~w~d~V~W~~~ali~ 250 (342)
+++.+...+.......+........ ++.+...+++++++++|++|...++..+..|..
T Consensus 157 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~l~~~in~~l~~~~~ 219 (239)
T 1lst_A 157 AALQDEVAASEGFLKQPAGKEYAFAGPSVKDKKYFGDGTGVGLRKDDTELKAAFDKALTELRQ 219 (239)
T ss_dssp EEEEEHHHHHHHTTTSGGGTTEEECSSCBCCHHHHCSSBCCEECTTCHHHHHHHHHHHHHHHH
T ss_pred EEEECHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHH
T ss_conf 999438999999996756665234166444542356407999908999999999999999997