HHsearch results for GI: 254780170 and protein with PDBid: 1p99_A
>1p99_A Hypothetical protein PG110; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.70A {Staphylococcus aureus subsp} SCOP: c.94.1.1
Probab=98.19 E-value=1.8e-05 Score=53.65 Aligned_cols=163 Identities=14% Similarity=0.142 Sum_probs=87.5
Q ss_pred CCEEEEEEECCCCCCEEECCCCCEEEEHHHHHHHHHHHHCCCCCEEEEEEC-CCCCCHHHHHCCCEEEEEECCCCCCCC-
Q ss_conf 794999871789883068898988015099999999996798220259981-431002677439627998124325320-
Q gi|254780170|r 33 RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL-NAKERFLALQSKQIDILSRNTDWTLLR- 110 (342)
Q Consensus 33 rG~L~vGv~~~~ppfs~~d~~G~~~GfDVDl~raiAaal~gd~~kVe~v~~-~~~~rf~aL~sG~vDil~~~~T~T~~R- 110 (342)
..++++|+.+. + ...| +..+..++..+ .+||+++. ++.....||.+|++|+...+....+.-
T Consensus 38 ~k~i~IG~~~~-~-------~~~~-----~~~~~~~kk~G---l~Ve~~~F~d~~~~~~AL~~G~ID~~~~~~~p~l~~~ 101 (295)
T 1p99_A 38 DKKVTIGVASN-D-------TKAW-----EKVKELAKKDD---IDVEIKHFSDYNLPNKALNDGDIDMNAFQHFAFLDQY 101 (295)
T ss_dssp --CEEEEESSS-C-------CHHH-----HHHHHHHGGGT---CCEEEEECSSTTSHHHHHHTTSSSEEEEEEHHHHHHH
T ss_pred CCEEEEEECCC-C-------HHHH-----HHHHHHHHHCC---CEEEEEEECCCHHHHHHHHCCCCCEEECCCHHHHHHH
T ss_conf 96499996798-3-------8999-----99999999759---8899998178277999997599676751789999999
Q ss_pred H-HCCCCCC--CCCCCCCCEEEEEECCCCCCCHHH-HCCCCEEEEECCCHHHHHHHHHHHCCC-CC-----------CE-
Q ss_conf 1-1027843--532234402346302113475364-178620343134269999999986299-85-----------07-
Q gi|254780170|r 111 E-ISLGLAF--RPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNM-KY-----------HP- 173 (342)
Q Consensus 111 d-~~~~v~F--s~~~~~dgq~~lVrk~~~i~s~~d-L~G~~I~v~~GTT~e~~l~~~~~~~~~-~~-----------~~- 173 (342)
. ...+.++ ..+.+....++ . ...+.++.| ++|++|++..+++++..+-..+...++ +. .+
T Consensus 102 ~k~~~g~~l~~v~~~~~~~~~~--~-~~~~~~i~d~~~Gk~Ia~p~~~s~~~~~l~~l~~~gli~l~~~~~~~~t~~DI~ 178 (295)
T 1p99_A 102 KKAHKGTKISALSTTVLAPLGI--Y-SDKIKDVKKVKDGAKVVIPNDVSNQARALKLLEAAGLIKLKKDFGLAGTVKDIT 178 (295)
T ss_dssp HHHCTTCCEEEEEEEEECCCEE--E-CSSCSCGGGCCTTCEEEEECSHHHHHHHHHHHHHTTSCEECTTCCTTCCGGGEE
T ss_pred HHHCCCCEEEEECCCCCCCCCC--C-CCCCCCHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCEEECCCCCCCCCHHHHH
T ss_conf 9767995599944521123101--2-656663211258985783368728999999998669277458888777876665
Q ss_pred -----EEECCHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCHHHCCC
Q ss_conf -----87479899999987396029982504799999836780010025
Q gi|254780170|r 174 -----IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 (342)
Q Consensus 174 -----v~~~~~~~a~~al~~Gr~DA~~~D~s~La~~~~~~~~p~~~~il 217 (342)
+.+-..+.+..+...|.+||.+.-.+.+ .+... .|....|+
T Consensus 179 ~n~~~~~~~~~~~a~~a~a~~~vDaa~i~~p~~--~~a~~-~~~~~~l~ 224 (295)
T 1p99_A 179 SNPKHLKITAVDAQQTARALSDVDIAVINNGVA--TKAGK-DPKNDPIF 224 (295)
T ss_dssp ECTTCCEEEEECGGGTTGGGGTSSEEEECHHHH--HHTTC-CTTTSCSE
T ss_pred HCCCCCCCCCCCHHHHHHHCCCCCEEEECCHHH--HHHCC-CCCCCEEE
T ss_conf 444444545640667787327764899554399--98278-86666588