HHsearch results for GI: 254780170 and protein with PDBid: 1p99_A

>1p99_A Hypothetical protein PG110; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.70A {Staphylococcus aureus subsp} SCOP: c.94.1.1
Probab=98.19  E-value=1.8e-05  Score=53.65  Aligned_cols=163  Identities=14%  Similarity=0.142  Sum_probs=87.5

Q ss_pred             CCEEEEEEECCCCCCEEECCCCCEEEEHHHHHHHHHHHHCCCCCEEEEEEC-CCCCCHHHHHCCCEEEEEECCCCCCCC-
Q ss_conf             794999871789883068898988015099999999996798220259981-431002677439627998124325320-
Q gi|254780170|r   33 RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL-NAKERFLALQSKQIDILSRNTDWTLLR-  110 (342)
Q Consensus        33 rG~L~vGv~~~~ppfs~~d~~G~~~GfDVDl~raiAaal~gd~~kVe~v~~-~~~~rf~aL~sG~vDil~~~~T~T~~R-  110 (342)
                      ..++++|+.+. +       ...|     +..+..++..+   .+||+++. ++.....||.+|++|+...+....+.- 
T Consensus        38 ~k~i~IG~~~~-~-------~~~~-----~~~~~~~kk~G---l~Ve~~~F~d~~~~~~AL~~G~ID~~~~~~~p~l~~~  101 (295)
T 1p99_A           38 DKKVTIGVASN-D-------TKAW-----EKVKELAKKDD---IDVEIKHFSDYNLPNKALNDGDIDMNAFQHFAFLDQY  101 (295)
T ss_dssp             --CEEEEESSS-C-------CHHH-----HHHHHHHGGGT---CCEEEEECSSTTSHHHHHHTTSSSEEEEEEHHHHHHH
T ss_pred             CCEEEEEECCC-C-------HHHH-----HHHHHHHHHCC---CEEEEEEECCCHHHHHHHHCCCCCEEECCCHHHHHHH
T ss_conf             96499996798-3-------8999-----99999999759---8899998178277999997599676751789999999


Q ss_pred             H-HCCCCCC--CCCCCCCCEEEEEECCCCCCCHHH-HCCCCEEEEECCCHHHHHHHHHHHCCC-CC-----------CE-
Q ss_conf             1-1027843--532234402346302113475364-178620343134269999999986299-85-----------07-
Q gi|254780170|r  111 E-ISLGLAF--RPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNM-KY-----------HP-  173 (342)
Q Consensus       111 d-~~~~v~F--s~~~~~dgq~~lVrk~~~i~s~~d-L~G~~I~v~~GTT~e~~l~~~~~~~~~-~~-----------~~-  173 (342)
                      . ...+.++  ..+.+....++  . ...+.++.| ++|++|++..+++++..+-..+...++ +.           .+ 
T Consensus       102 ~k~~~g~~l~~v~~~~~~~~~~--~-~~~~~~i~d~~~Gk~Ia~p~~~s~~~~~l~~l~~~gli~l~~~~~~~~t~~DI~  178 (295)
T 1p99_A          102 KKAHKGTKISALSTTVLAPLGI--Y-SDKIKDVKKVKDGAKVVIPNDVSNQARALKLLEAAGLIKLKKDFGLAGTVKDIT  178 (295)
T ss_dssp             HHHCTTCCEEEEEEEEECCCEE--E-CSSCSCGGGCCTTCEEEEECSHHHHHHHHHHHHHTTSCEECTTCCTTCCGGGEE
T ss_pred             HHHCCCCEEEEECCCCCCCCCC--C-CCCCCCHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCEEECCCCCCCCCHHHHH
T ss_conf             9767995599944521123101--2-656663211258985783368728999999998669277458888777876665


Q ss_pred             -----EEECCHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCHHHCCC
Q ss_conf             -----87479899999987396029982504799999836780010025
Q gi|254780170|r  174 -----IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL  217 (342)
Q Consensus       174 -----v~~~~~~~a~~al~~Gr~DA~~~D~s~La~~~~~~~~p~~~~il  217 (342)
                           +.+-..+.+..+...|.+||.+.-.+.+  .+... .|....|+
T Consensus       179 ~n~~~~~~~~~~~a~~a~a~~~vDaa~i~~p~~--~~a~~-~~~~~~l~  224 (295)
T 1p99_A          179 SNPKHLKITAVDAQQTARALSDVDIAVINNGVA--TKAGK-DPKNDPIF  224 (295)
T ss_dssp             ECTTCCEEEEECGGGTTGGGGTSSEEEECHHHH--HHTTC-CTTTSCSE
T ss_pred             HCCCCCCCCCCCHHHHHHHCCCCCEEEECCHHH--HHHCC-CCCCCEEE
T ss_conf             444444545640667787327764899554399--98278-86666588