HHsearch results for GI: 254780170 and protein with PDBid: 1ryo_A
>1ryo_A Serotransferrin; iron transport, metal transport; 1.20A {Homo sapiens} SCOP: c.94.1.2 PDB: 1bp5_A 1btj_A 1n84_A 1oqg_A 2o84_X 1fqf_A 1fqe_A 1oqh_A 2o7u_B 1jqf_A 1n7x_A 3fgs_A 1a8e_A 1a8f_A 1suv_C 1dtg_A 1d3k_A 1d4n_A 1n7w_A 1b3e_A ...
Probab=94.48 E-value=0.069 Score=30.86 Aligned_cols=185 Identities=11% Similarity=0.168 Sum_probs=92.4
Q ss_pred HHHHHHHHHH----CCCCCEEEEEE-CCCCCCHHHHHCCCEEEEEECCC--CCC-CCHHCCCCCCC---------CCCCC
Q ss_conf 9999999996----79822025998-14310026774396279981243--253-20110278435---------32234
Q gi|254780170|r 62 DFCRALSSAI----FDDPSKIQYLP-LNAKERFLALQSKQIDILSRNTD--WTL-LREISLGLAFR---------PITYF 124 (342)
Q Consensus 62 Dl~raiAaal----~gd~~kVe~v~-~~~~~rf~aL~sG~vDil~~~~T--~T~-~Rd~~~~v~Fs---------~~~~~ 124 (342)
+=|+.++.+. .+....++-|. .+..+-+.+|..|++|+++-.-. +.. .|+..+..-.+ ..+||
T Consensus 17 ~KC~~l~~~~~a~~~~~~p~~~Cv~~~~~~~C~~~I~~G~AD~~~ld~~~~~~A~~~~~~L~pi~aE~~~~~~~~~~~Y~ 96 (327)
T 1ryo_A 17 TKCQSFRDHMKSVIPSDGPSVACVKKASYLDCIRAIAANEADAVTLDAGLVYDAYLAPNNLKPVVAEFYGSKEDPQTFYY 96 (327)
T ss_dssp HHHHHHHHHHHHHSCTTSCEEEEEEESSHHHHHHHHHTTSCCBEEECHHHHHHHHSTTTCCEEEEEEEEECSSSEESEEE
T ss_pred HHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHCCCCCEEEECHHHHHHHHCCCCCCEEEEEEEECCCCCCCEEEE
T ss_conf 99999999988632578986699957999999999977998889978699998753458977878872047778851799
Q ss_pred CCEEEEEECCCCCCCHHHHCCCCEEEEE-CCCHH--------------------HHHHHHHHHCCCC------CC-----
Q ss_conf 4023463021134753641786203431-34269--------------------9999999862998------50-----
Q gi|254780170|r 125 DGQGFIMHKKKGISSVSQLSGASICVQA-GTTTE--------------------LTLADYFKAHNMK------YH----- 172 (342)
Q Consensus 125 dgq~~lVrk~~~i~s~~dL~G~~I~v~~-GTT~e--------------------~~l~~~~~~~~~~------~~----- 172 (342)
...+|++++.+ ++.+|.||+.|-.- |.|.- ..+.+||...=.+ +.
T Consensus 97 --aVavVkk~s~~-~~~~LkGKksChtG~~~taGw~~Pv~~l~~~~~~~~~~~~~~v~~fF~~sC~pg~~~~~~~~lC~l 173 (327)
T 1ryo_A 97 --AVAVVKKDSGF-QMNQLRGKKSCHTGLGRSAGWNIPIGLLYCDLPEPRKPLEKAVANFFSGSCAPCADGTDFPQLCQL 173 (327)
T ss_dssp --EEEEEETTCCC-CGGGCTTCCEEESCTTCTTTTHHHHHHHGGGSCSCCCSHHHHHHHHSSSEECTTSCTTTCGGGGTT
T ss_pred --EEEEEECCCCC-CHHHHCCCCEECCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCC
T ss_conf --99999678744-465626995021588885211157889975258888750456787606654678677665421346
Q ss_pred --------EEEECCHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCHHHCCCCC-------------CCCCCCEEEECC
Q ss_conf --------78747989999998739602998250479999983678001002564-------------442371010002
Q gi|254780170|r 173 --------PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-------------IISKSPLAPAII 231 (342)
Q Consensus 173 --------~v~~~~~~~a~~al~~Gr~DA~~~D~s~La~~~~~~~~p~~~~il~e-------------~iskEPlg~avr 231 (342)
.-.|-.+..++.-|..|.-|.-....+.+.-.-....++++|.+|=. .+.+.|-..++-
T Consensus 174 C~~~~~~~~~~Y~G~~GAlrCL~eg~GDVAFv~~~~v~~~~~~~~~~~dy~llC~dg~~~~~~~~~~C~~~~~P~~~v~~ 253 (327)
T 1ryo_A 174 CPGCGCSTLNQYFGYSGAFKCLKDGAGDVAFVKHSTIFENLANKADRDQYELLCLDNTRKPVDEYKDCHLAQVPSHTVVA 253 (327)
T ss_dssp STTCCSSTTSTTCHHHHHHHHHHTTSCSEEEEETTHHHHHCCSHHHHTTEEEECTTSCEEEGGGGGGSCSEEEECCEEEE
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCHHHHHHCCCCCCCCHHEECCCCCCCCCCCCCCCCCCCCCCCEEEE
T ss_conf 77878898656648077899998589846998541154430354677534118899997455556667510577842798
Q ss_pred CCCHHHHHHHHHHHHHHHHHH
Q ss_conf 777579999887744331121
Q gi|254780170|r 232 QGDTEWYNIVSWTHYAMVTAE 252 (342)
Q Consensus 232 ~gD~~w~d~V~W~~~ali~Ae 252 (342)
+.|..+.+.|. ..|..+.
T Consensus 254 ~~~~~~~~~i~---~~L~~~~ 271 (327)
T 1ryo_A 254 RSMGGKEDLIW---ELLNQAQ 271 (327)
T ss_dssp CSSSCCHHHHH---HHHHHHH
T ss_pred CCCCCCHHHHH---HHHHHHH
T ss_conf 89855089999---9999999