HHsearch results for GI: 254780170 and protein with PDBid: 1ryo_A

>1ryo_A Serotransferrin; iron transport, metal transport; 1.20A {Homo sapiens} SCOP: c.94.1.2 PDB: 1bp5_A 1btj_A 1n84_A 1oqg_A 2o84_X 1fqf_A 1fqe_A 1oqh_A 2o7u_B 1jqf_A 1n7x_A 3fgs_A 1a8e_A 1a8f_A 1suv_C 1dtg_A 1d3k_A 1d4n_A 1n7w_A 1b3e_A ...
Probab=94.48  E-value=0.069  Score=30.86  Aligned_cols=185  Identities=11%  Similarity=0.168  Sum_probs=92.4

Q ss_pred             HHHHHHHHHH----CCCCCEEEEEE-CCCCCCHHHHHCCCEEEEEECCC--CCC-CCHHCCCCCCC---------CCCCC
Q ss_conf             9999999996----79822025998-14310026774396279981243--253-20110278435---------32234
Q gi|254780170|r   62 DFCRALSSAI----FDDPSKIQYLP-LNAKERFLALQSKQIDILSRNTD--WTL-LREISLGLAFR---------PITYF  124 (342)
Q Consensus        62 Dl~raiAaal----~gd~~kVe~v~-~~~~~rf~aL~sG~vDil~~~~T--~T~-~Rd~~~~v~Fs---------~~~~~  124 (342)
                      +=|+.++.+.    .+....++-|. .+..+-+.+|..|++|+++-.-.  +.. .|+..+..-.+         ..+||
T Consensus        17 ~KC~~l~~~~~a~~~~~~p~~~Cv~~~~~~~C~~~I~~G~AD~~~ld~~~~~~A~~~~~~L~pi~aE~~~~~~~~~~~Y~   96 (327)
T 1ryo_A           17 TKCQSFRDHMKSVIPSDGPSVACVKKASYLDCIRAIAANEADAVTLDAGLVYDAYLAPNNLKPVVAEFYGSKEDPQTFYY   96 (327)
T ss_dssp             HHHHHHHHHHHHHSCTTSCEEEEEEESSHHHHHHHHHTTSCCBEEECHHHHHHHHSTTTCCEEEEEEEEECSSSEESEEE
T ss_pred             HHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHCCCCCEEEECHHHHHHHHCCCCCCEEEEEEEECCCCCCCEEEE
T ss_conf             99999999988632578986699957999999999977998889978699998753458977878872047778851799


Q ss_pred             CCEEEEEECCCCCCCHHHHCCCCEEEEE-CCCHH--------------------HHHHHHHHHCCCC------CC-----
Q ss_conf             4023463021134753641786203431-34269--------------------9999999862998------50-----
Q gi|254780170|r  125 DGQGFIMHKKKGISSVSQLSGASICVQA-GTTTE--------------------LTLADYFKAHNMK------YH-----  172 (342)
Q Consensus       125 dgq~~lVrk~~~i~s~~dL~G~~I~v~~-GTT~e--------------------~~l~~~~~~~~~~------~~-----  172 (342)
                        ...+|++++.+ ++.+|.||+.|-.- |.|.-                    ..+.+||...=.+      +.     
T Consensus        97 --aVavVkk~s~~-~~~~LkGKksChtG~~~taGw~~Pv~~l~~~~~~~~~~~~~~v~~fF~~sC~pg~~~~~~~~lC~l  173 (327)
T 1ryo_A           97 --AVAVVKKDSGF-QMNQLRGKKSCHTGLGRSAGWNIPIGLLYCDLPEPRKPLEKAVANFFSGSCAPCADGTDFPQLCQL  173 (327)
T ss_dssp             --EEEEEETTCCC-CGGGCTTCCEEESCTTCTTTTHHHHHHHGGGSCSCCCSHHHHHHHHSSSEECTTSCTTTCGGGGTT
T ss_pred             --EEEEEECCCCC-CHHHHCCCCEECCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCC
T ss_conf             --99999678744-465626995021588885211157889975258888750456787606654678677665421346


Q ss_pred             --------EEEECCHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCHHHCCCCC-------------CCCCCCEEEECC
Q ss_conf             --------78747989999998739602998250479999983678001002564-------------442371010002
Q gi|254780170|r  173 --------PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-------------IISKSPLAPAII  231 (342)
Q Consensus       173 --------~v~~~~~~~a~~al~~Gr~DA~~~D~s~La~~~~~~~~p~~~~il~e-------------~iskEPlg~avr  231 (342)
                              .-.|-.+..++.-|..|.-|.-....+.+.-.-....++++|.+|=.             .+.+.|-..++-
T Consensus       174 C~~~~~~~~~~Y~G~~GAlrCL~eg~GDVAFv~~~~v~~~~~~~~~~~dy~llC~dg~~~~~~~~~~C~~~~~P~~~v~~  253 (327)
T 1ryo_A          174 CPGCGCSTLNQYFGYSGAFKCLKDGAGDVAFVKHSTIFENLANKADRDQYELLCLDNTRKPVDEYKDCHLAQVPSHTVVA  253 (327)
T ss_dssp             STTCCSSTTSTTCHHHHHHHHHHTTSCSEEEEETTHHHHHCCSHHHHTTEEEECTTSCEEEGGGGGGSCSEEEECCEEEE
T ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCHHHHHHCCCCCCCCHHEECCCCCCCCCCCCCCCCCCCCCCCEEEE
T ss_conf             77878898656648077899998589846998541154430354677534118899997455556667510577842798


Q ss_pred             CCCHHHHHHHHHHHHHHHHHH
Q ss_conf             777579999887744331121
Q gi|254780170|r  232 QGDTEWYNIVSWTHYAMVTAE  252 (342)
Q Consensus       232 ~gD~~w~d~V~W~~~ali~Ae  252 (342)
                      +.|..+.+.|.   ..|..+.
T Consensus       254 ~~~~~~~~~i~---~~L~~~~  271 (327)
T 1ryo_A          254 RSMGGKEDLIW---ELLNQAQ  271 (327)
T ss_dssp             CSSSCCHHHHH---HHHHHHH
T ss_pred             CCCCCCHHHHH---HHHHHHH
T ss_conf             89855089999---9999999