HHsearch results for GI: 254780170 and protein with PDBid: 1zbm_A

>1zbm_A Hypothetical protein AF1704; alpha-beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Archaeoglobus fulgidus dsm 4304} SCOP: c.94.1.1
Probab=95.29  E-value=0.12  Score=29.35  Aligned_cols=252  Identities=17%  Similarity=0.115  Sum_probs=118.7

Q ss_pred             CCEEEEEEECCCCCCEEECCCCCEEEEHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHCCCEEEEEECCCCCCCCHH
Q ss_conf             79499987178988306889898801509999999999679822025998143100267743962799812432532011
Q gi|254780170|r   33 RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI  112 (342)
Q Consensus        33 rG~L~vGv~~~~ppfs~~d~~G~~~GfDVDl~raiAaal~gd~~kVe~v~~~~~~rf~aL~sG~vDil~~~~T~T~~Rd~  112 (342)
                      +-+||+|.+++ |             .|.=+--++..-.+.....++++..+..+.-..+.+|++|+...+ +...-|-.
T Consensus         9 ~~~i~ig~sp~-~-------------~d~~~f~al~~g~~~~~~~~e~~~~d~~~LN~~l~~G~lDv~~iS-s~~y~~~~   73 (280)
T 1zbm_A            9 SHKIRVAHTPD-A-------------DDAFMFYAMTHGKVDTWLEIEHVIEDIETLNRKAFNAEYEVTAIS-AHAYALLD   73 (280)
T ss_dssp             TCEEEEEECSS-H-------------HHHHHHHHHHTTCSCCSCEEEEEECCHHHHHHHGGGTCCSEEEEE-HHHHTTST
T ss_pred             CCEEEEEECCC-C-------------CHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHCCCCCEEEHH-HHHHHHCC
T ss_conf             64179997799-9-------------638887899839978998635864799999999986999997171-99999442


Q ss_pred             C-C-CCCCCCCCCCCCEEEEEECCCCCCCHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCC
Q ss_conf             0-2-7843532234402346302113475364178620343134269999999986299850787479899999987396
Q gi|254780170|r  113 S-L-GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR  190 (342)
Q Consensus       113 ~-~-~v~Fs~~~~~dgq~~lVrk~~~i~s~~dL~G~~I~v~~GTT~e~~l~~~~~~~~~~~~~v~~~~~~~a~~al~~Gr  190 (342)
                      . + -+... -..-+|.+.+|-.    ++..+|+|++|++..-+|+...|-..+-.   .+..+. ....+...++..|+
T Consensus        74 ~~y~lLp~~-s~~~~g~~~~v~~----~~~~~L~gk~ial~~~stTs~~Ll~ill~---~~~~~~-~~~~~~~~al~~g~  144 (280)
T 1zbm_A           74 DKYRILSAG-ASVGDGYGPVVVA----KSEISLDGKRIAVPGRYTTANLLLKLAVE---DFEPVE-MPFDRIIQAVLDEE  144 (280)
T ss_dssp             TTEEECSSC-CEEESSCCCEEEE----SSCCCCTTCEEEESCTTSHHHHHHHHHCS---SCEEEE-CCGGGHHHHHHTTS
T ss_pred             CCEEECCCE-EEEECCCEEEEEE----CCCCCCCCCEEEECCCCCHHHHHHHHHHH---CCCCCC-CCHHHCCCHHHCCC
T ss_conf             406687863-8840476148996----77667789879856987199999999985---167613-68653350544488


Q ss_pred             EEEE--EECCHHHHHHHHHCCCCHHHCCC--CC---CCCCCCE--E-EECCCC-CHHHHHHHHHHHHHHHHHHHHHCCHH
Q ss_conf             0299--82504799999836780010025--64---4423710--1-000277-75799998877443311212330152
Q gi|254780170|r  191 CDAY--TGDISALYALKLTNDRPSEHVIL--PD---IISKSPL--A-PAIIQG-DTEWYNIVSWTHYAMVTAEELGITQK  259 (342)
Q Consensus       191 ~DA~--~~D~s~La~~~~~~~~p~~~~il--~e---~iskEPl--g-~avr~g-D~~w~d~V~W~~~ali~Aee~git~~  259 (342)
                      +||.  +.|.. |..   .  ..+-+.+.  .+   ..+.-|+  | .++|++ +++..   .-+..++.+|-+++.  +
T Consensus       145 ~Da~llIgd~a-l~~---~--~~~~~~v~DLge~W~~~tglP~vfa~~~vrr~~~~~~~---~~~~~al~~s~~~~~--~  213 (280)
T 1zbm_A          145 VDAGLLIHEGQ-ITY---A--DYGLKCVLDLWDWWSEQVKLPLPLGLNAIRRDLSVEVQ---EEFLRAMRESIAFAI--E  213 (280)
T ss_dssp             SSEEEECSGGG-GTG---G--GGTCEEEEEHHHHHHTTCSSCEEEEEEEEETTSCHHHH---HHHHHHHHHHHHHHH--H
T ss_pred             CCCCEECCHHH-HCC---C--CCCCCEEEEHHHHHCCCCCCCEEEEEEEEECCCCHHHH---HHHHHHHHHHHHHHH--H
T ss_conf             87031557588-440---0--24990896626676357798716578875033799999---999999999999999--7


Q ss_pred             HHHHHHHCCCCHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCHHH---CCCCC
Q ss_conf             089886226717788762358876503337998679999999718699987886488899988755760342---89530
Q gi|254780170|r  260 NINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWS---KGGLM  336 (342)
Q Consensus       260 nv~~~~~~s~~p~i~r~lg~~~~~~~g~~lgl~~~~~~~~i~~vGNYgei~~rnlg~~s~l~~~r~~N~lw~---~gGl~  336 (342)
                      |.++...        ....        ...||+.....+-+   ..|=+.+.-+||+.    --+|++..|.   +=||+
T Consensus       214 ~~~e~~~--------~~~~--------~~~~l~~~~~~~y~---~~Y~~~~sy~l~~~----~~~gL~~f~~~a~~~Gli  270 (280)
T 1zbm_A          214 NPDEAIE--------YAMK--------YSRGLDRERAKRFA---MMYVNDYTYNMPES----VDAALKKLYEMAEAKGLI  270 (280)
T ss_dssp             SHHHHHH--------HHGG--------GCTTCCHHHHHHHH---HHHSSHHHHSCCHH----HHHHHHHHHHHHHTTTCC
T ss_pred             CHHHHHH--------HHHH--------HHCCCCHHHHHHHH---HHHHHHEEECCCHH----HHHHHHHHHHHHHHCCCC
T ss_conf             9899999--------9999--------81399999999999---99887716489999----999999999999987999


Q ss_pred             CCCCCC
Q ss_conf             378889
Q gi|254780170|r  337 YAPPIR  342 (342)
Q Consensus       337 y~pp~r  342 (342)
                      =.||++
T Consensus       271 ~~P~l~  276 (280)
T 1zbm_A          271 KMPKLD  276 (280)
T ss_dssp             ------
T ss_pred             CCCCCC
T ss_conf             999877