HHsearch results for GI: 254780170 and protein with PDBid: 1zbm_A
>1zbm_A Hypothetical protein AF1704; alpha-beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Archaeoglobus fulgidus dsm 4304} SCOP: c.94.1.1
Probab=95.29 E-value=0.12 Score=29.35 Aligned_cols=252 Identities=17% Similarity=0.115 Sum_probs=118.7
Q ss_pred CCEEEEEEECCCCCCEEECCCCCEEEEHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHCCCEEEEEECCCCCCCCHH
Q ss_conf 79499987178988306889898801509999999999679822025998143100267743962799812432532011
Q gi|254780170|r 33 RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 (342)
Q Consensus 33 rG~L~vGv~~~~ppfs~~d~~G~~~GfDVDl~raiAaal~gd~~kVe~v~~~~~~rf~aL~sG~vDil~~~~T~T~~Rd~ 112 (342)
+-+||+|.+++ | .|.=+--++..-.+.....++++..+..+.-..+.+|++|+...+ +...-|-.
T Consensus 9 ~~~i~ig~sp~-~-------------~d~~~f~al~~g~~~~~~~~e~~~~d~~~LN~~l~~G~lDv~~iS-s~~y~~~~ 73 (280)
T 1zbm_A 9 SHKIRVAHTPD-A-------------DDAFMFYAMTHGKVDTWLEIEHVIEDIETLNRKAFNAEYEVTAIS-AHAYALLD 73 (280)
T ss_dssp TCEEEEEECSS-H-------------HHHHHHHHHHTTCSCCSCEEEEEECCHHHHHHHGGGTCCSEEEEE-HHHHTTST
T ss_pred CCEEEEEECCC-C-------------CHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHCCCCCEEEHH-HHHHHHCC
T ss_conf 64179997799-9-------------638887899839978998635864799999999986999997171-99999442
Q ss_pred C-C-CCCCCCCCCCCCEEEEEECCCCCCCHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCC
Q ss_conf 0-2-7843532234402346302113475364178620343134269999999986299850787479899999987396
Q gi|254780170|r 113 S-L-GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190 (342)
Q Consensus 113 ~-~-~v~Fs~~~~~dgq~~lVrk~~~i~s~~dL~G~~I~v~~GTT~e~~l~~~~~~~~~~~~~v~~~~~~~a~~al~~Gr 190 (342)
. + -+... -..-+|.+.+|-. ++..+|+|++|++..-+|+...|-..+-. .+..+. ....+...++..|+
T Consensus 74 ~~y~lLp~~-s~~~~g~~~~v~~----~~~~~L~gk~ial~~~stTs~~Ll~ill~---~~~~~~-~~~~~~~~al~~g~ 144 (280)
T 1zbm_A 74 DKYRILSAG-ASVGDGYGPVVVA----KSEISLDGKRIAVPGRYTTANLLLKLAVE---DFEPVE-MPFDRIIQAVLDEE 144 (280)
T ss_dssp TTEEECSSC-CEEESSCCCEEEE----SSCCCCTTCEEEESCTTSHHHHHHHHHCS---SCEEEE-CCGGGHHHHHHTTS
T ss_pred CCEEECCCE-EEEECCCEEEEEE----CCCCCCCCCEEEECCCCCHHHHHHHHHHH---CCCCCC-CCHHHCCCHHHCCC
T ss_conf 406687863-8840476148996----77667789879856987199999999985---167613-68653350544488
Q ss_pred EEEE--EECCHHHHHHHHHCCCCHHHCCC--CC---CCCCCCE--E-EECCCC-CHHHHHHHHHHHHHHHHHHHHHCCHH
Q ss_conf 0299--82504799999836780010025--64---4423710--1-000277-75799998877443311212330152
Q gi|254780170|r 191 CDAY--TGDISALYALKLTNDRPSEHVIL--PD---IISKSPL--A-PAIIQG-DTEWYNIVSWTHYAMVTAEELGITQK 259 (342)
Q Consensus 191 ~DA~--~~D~s~La~~~~~~~~p~~~~il--~e---~iskEPl--g-~avr~g-D~~w~d~V~W~~~ali~Aee~git~~ 259 (342)
+||. +.|.. |.. . ..+-+.+. .+ ..+.-|+ | .++|++ +++.. .-+..++.+|-+++. +
T Consensus 145 ~Da~llIgd~a-l~~---~--~~~~~~v~DLge~W~~~tglP~vfa~~~vrr~~~~~~~---~~~~~al~~s~~~~~--~ 213 (280)
T 1zbm_A 145 VDAGLLIHEGQ-ITY---A--DYGLKCVLDLWDWWSEQVKLPLPLGLNAIRRDLSVEVQ---EEFLRAMRESIAFAI--E 213 (280)
T ss_dssp SSEEEECSGGG-GTG---G--GGTCEEEEEHHHHHHTTCSSCEEEEEEEEETTSCHHHH---HHHHHHHHHHHHHHH--H
T ss_pred CCCCEECCHHH-HCC---C--CCCCCEEEEHHHHHCCCCCCCEEEEEEEEECCCCHHHH---HHHHHHHHHHHHHHH--H
T ss_conf 87031557588-440---0--24990896626676357798716578875033799999---999999999999999--7
Q ss_pred HHHHHHHCCCCHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCHHH---CCCCC
Q ss_conf 089886226717788762358876503337998679999999718699987886488899988755760342---89530
Q gi|254780170|r 260 NINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWS---KGGLM 336 (342)
Q Consensus 260 nv~~~~~~s~~p~i~r~lg~~~~~~~g~~lgl~~~~~~~~i~~vGNYgei~~rnlg~~s~l~~~r~~N~lw~---~gGl~ 336 (342)
|.++... .... ...||+.....+-+ ..|=+.+.-+||+. --+|++..|. +=||+
T Consensus 214 ~~~e~~~--------~~~~--------~~~~l~~~~~~~y~---~~Y~~~~sy~l~~~----~~~gL~~f~~~a~~~Gli 270 (280)
T 1zbm_A 214 NPDEAIE--------YAMK--------YSRGLDRERAKRFA---MMYVNDYTYNMPES----VDAALKKLYEMAEAKGLI 270 (280)
T ss_dssp SHHHHHH--------HHGG--------GCTTCCHHHHHHHH---HHHSSHHHHSCCHH----HHHHHHHHHHHHHTTTCC
T ss_pred CHHHHHH--------HHHH--------HHCCCCHHHHHHHH---HHHHHHEEECCCHH----HHHHHHHHHHHHHHCCCC
T ss_conf 9899999--------9999--------81399999999999---99887716489999----999999999999987999
Q ss_pred CCCCCC
Q ss_conf 378889
Q gi|254780170|r 337 YAPPIR 342 (342)
Q Consensus 337 y~pp~r 342 (342)
=.||++
T Consensus 271 ~~P~l~ 276 (280)
T 1zbm_A 271 KMPKLD 276 (280)
T ss_dssp ------
T ss_pred CCCCCC
T ss_conf 999877