HHsearch results for GI: 254780170 and protein with PDBid: 2h98_A
>2h98_A HTH-type transcriptional regulator CATM; BENM, LTTR; 1.80A {Acinetobacter SP} PDB: 2h9q_A* 2f7b_A 2f7c_A* 3glb_A*
Probab=90.96 E-value=0.82 Score=24.08 Aligned_cols=189 Identities=13% Similarity=0.072 Sum_probs=110.0
Q ss_pred HCCEEEEEEECCCCCCEEECCCCCEEEEHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHCCCEEEEEECCCCCCCCH
Q ss_conf 57949998717898830688989880150999999999967982202599814310026774396279981243253201
Q gi|254780170|r 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 (342)
Q Consensus 32 ~rG~L~vGv~~~~ppfs~~d~~G~~~GfDVDl~raiAaal~gd~~kVe~v~~~~~~rf~aL~sG~vDil~~~~T~T~~Rd 111 (342)
.+|.+++|+...+.. .+-.++.+++.+.- ....+++...++.+....|.+|++|+.+.....+..
T Consensus 88 ~~~~l~i~~~~~~~~-----------~~l~~~l~~~~~~~--P~v~i~i~~~~~~~~~~~l~~~~~Di~i~~~~~~~~-- 152 (313)
T 2h98_A 88 VSQTLRIGYVSSLLY-----------GLLPEIIYLFRQQN--PEIHIELIECGTKDQINALKQGKIDLGFGRLKITDP-- 152 (313)
T ss_dssp -CCEEEEEECGGGGG-----------TTHHHHHHHHHHHC--TTSEEEEEECCHHHHHHHHHHTSCSEEEESSCCCCT--
T ss_pred CCCEEEEEECHHHHH-----------HHHHHHHHHHHHHC--CCEEEEEECCCCHHHHHHHHCCCCCCEEEECCCCCC--
T ss_conf 662399986105678-----------89999999998629--933432112782789999742155513530356673--
Q ss_pred HCCCCCCCCCCCCCCEEEEEECCCC-------CCCHHHHCCCCEEE---EECCCHHHHHHHHHHHCCCCCCEE-EECCHH
Q ss_conf 1027843532234402346302113-------47536417862034---313426999999998629985078-747989
Q gi|254780170|r 112 ISLGLAFRPITYFDGQGFIMHKKKG-------ISSVSQLSGASICV---QAGTTTELTLADYFKAHNMKYHPI-VFERVE 180 (342)
Q Consensus 112 ~~~~v~Fs~~~~~dgq~~lVrk~~~-------i~s~~dL~G~~I~v---~~GTT~e~~l~~~~~~~~~~~~~v-~~~~~~ 180 (342)
++. ..+.+.+...++++++.. --+.++|....... ..+......+..+++..+....++ .+++..
T Consensus 153 ---~~~-~~~l~~~~~~~~~~~~~~l~~~~~~~i~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (313)
T 2h98_A 153 ---AIR-RIMLHKEQLKLAIHKHHHLNQFAATGVHLSQIIDEPMLLYPVSQKPNFATFIQSLFTELGLVPSKLTEIREIQ 228 (313)
T ss_dssp ---TEE-EEEEEEEEEEEEEETTSGGGGGTTSCBCGGGGTTSCEEECCCSSSSSHHHHHHHHHHHTTCCCSCEEECSCHH
T ss_pred ---HHH-HHHHHHHHHEEECCCCCHHHHCCCCCCCHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCEEECCCCHH
T ss_conf ---134-5543332203420477624433578758899808987984145676410256677886389874001349899
Q ss_pred HHHHHHHCCCEEEEEECCHHHHHHHHHCCCCHHHCCC--CCCCCCCCEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 9999987396029982504799999836780010025--6444237101000277757999988774433
Q gi|254780170|r 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL--PDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 (342)
Q Consensus 181 ~a~~al~~Gr~DA~~~D~s~La~~~~~~~~p~~~~il--~e~iskEPlg~avr~gD~~w~d~V~W~~~al 248 (342)
.+.....+|..=++..... + .. ..++.+.+ ++.--.-|++.+.|+++. ...++|.+..+
T Consensus 229 ~~~~~v~~g~gi~~lP~~~--~----~~-~~~~l~~~pl~~~~~~~~i~l~~r~~~~--~~~~~~f~~~~ 289 (313)
T 2h98_A 229 LALGLVAAGEGVCIVPASA--M----DI-GVKNLLYIPILDDDAYSPISLAVRNMDH--SNYIPKILACV 289 (313)
T ss_dssp HHHHHHHTTSCBEEEEGGG--G----GS-CCTTEEEEEBCSTTCEEEEEEEEETTCC--CTHHHHHHHHH
T ss_pred HHHHHHHHCCEEEEEHHHH--H----HH-HCCCEEEEECCCCCCCEEEEEEEECCCC--CHHHHHHHHHH
T ss_conf 9999999499699713889--8----44-3099899987899860079999989988--97999999999