HHsearch results for GI: 254780170 and protein with PDBid: 2h9b_A
>2h9b_A HTH-type transcriptional regulator BENM; LTTR, transcriptional activator, LYSR-type transcriptional regulator; 1.80A {Acinetobacter SP} PDB: 2h99_A 3k1m_A 3k1n_A 3k1p_A 2f7a_A* 2f6p_A 2f78_A 2f6g_A* 2f8d_A 2f97_A*
Probab=91.45 E-value=0.73 Score=24.38 Aligned_cols=166 Identities=11% Similarity=0.029 Sum_probs=101.4
Q ss_pred HHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHCCCEEEEEECCCCCCCCHHCCCCCCCCCCCCCCEEEEEECCCC----
Q ss_conf 9999999999679822025998143100267743962799812432532011027843532234402346302113----
Q gi|254780170|r 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG---- 136 (342)
Q Consensus 61 VDl~raiAaal~gd~~kVe~v~~~~~~rf~aL~sG~vDil~~~~T~T~~Rd~~~~v~Fs~~~~~dgq~~lVrk~~~---- 136 (342)
..+..++.+.- ...++++...+..+.+..|.+|++|+.+...... ...+.+ .+.+.+...++++++..
T Consensus 106 ~~~l~~~~~~~--p~v~l~~~~~~~~~l~~~l~~g~~Dlai~~~~~~-----~~~~~~-~~l~~~~~~~~~~~~~~l~~~ 177 (312)
T 2h9b_A 106 PRIIHLYRQAH--PNLRIELYEMGTKAQTEALKEGRIDAGFGRLKIS-----DPAIKH-SLLRNERLMVAVHASHPLNQM 177 (312)
T ss_dssp HHHHHHHHHTC--TTCEEEEEECCHHHHHHHHHTTSCSEEEESSCCC-----CTTEEE-EEEEEEEEEEEEETTSGGGGG
T ss_pred HHHHHHHHHHC--CCCEEEECCCCCHHHHHHHHCCCCCEEEEECCCC-----CCCCEE-EEECCCEEEEEECCCCHHHHC
T ss_conf 99999999978--9977853135507799999769964799606889-----876179-981130599996378846653
Q ss_pred ---CCCHHHHCCCCEEEE---ECCCHHHHHHHHHHHCCCCCCEE-EECCHHHHHHHHHCCCEEEEEECCHHHHHHHHHCC
Q ss_conf ---475364178620343---13426999999998629985078-74798999999873960299825047999998367
Q gi|254780170|r 137 ---ISSVSQLSGASICVQ---AGTTTELTLADYFKAHNMKYHPI-VFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 (342)
Q Consensus 137 ---i~s~~dL~G~~I~v~---~GTT~e~~l~~~~~~~~~~~~~v-~~~~~~~a~~al~~Gr~DA~~~D~s~La~~~~~~~ 209 (342)
..+++||......+. .++.....+..++...+....++ .+++...+.+.+.+|.+=++.-... . ...
T Consensus 178 ~~~~~~~~dl~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~v~~g~gi~ilP~~~-~-----~~~ 251 (312)
T 2h9b_A 178 KDKGVHLNDLIDEKILLYPSSPKPNFSTHVMNIFSDHGLEPTKINEVREVQLALGLVAAGEGISLVPAST-Q-----SIQ 251 (312)
T ss_dssp TTTCBCGGGSTTSEEEECCCSSSSSHHHHHHHHHHTTTCCCSEEEECSSHHHHHHHHHTTSCBEEEEGGG-G-----GBC
T ss_pred CCCCCHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHCCCEEEEECHHH-H-----HHH
T ss_conf 3432025564379779842876651246666666650788614653167999999998399599920988-7-----453
Q ss_pred CCHHHCCC--CCCCCCCCEEEECCCCCHHHHHHHHH
Q ss_conf 80010025--64442371010002777579999887
Q gi|254780170|r 210 RPSEHVIL--PDIISKSPLAPAIIQGDTEWYNIVSW 243 (342)
Q Consensus 210 ~p~~~~il--~e~iskEPlg~avr~gD~~w~d~V~W 243 (342)
. .+.+.+ ++..-.-++.++.|++.. ...+++
T Consensus 252 ~-~~l~~~pl~~~~~~~~~~l~~r~~~~--~~~~~~ 284 (312)
T 2h9b_A 252 L-FNLSYVPLLDPDAITPIYIAVRNMEE--STYIYS 284 (312)
T ss_dssp C-TTEEEEEBCSTTCEEEEEEEEETTCC--CHHHHH
T ss_pred H-CCEEEEECCCCCCEEEEEEEEECCCC--CHHHHH
T ss_conf 3-88799985798863289999979999--989999