HHsearch results for GI: 254780170 and protein with PDBid: 2hpg_A

>2hpg_A ABC transporter, periplasmic substrate-binding protein; periplasmic binding protein, thermophilic proteins, trap- transport; HET: MSE; 1.90A {Thermotoga maritima}
Probab=97.26  E-value=0.0035  Score=39.05  Aligned_cols=175  Identities=13%  Similarity=0.098  Sum_probs=99.0

Q ss_pred             EEEEEEECCCCCCEEECCCCCEEE-EHHHHHHHHHHHHCCCCCEEEEEEC----CCCCCHHHHHCCCEEEEEECCCCCCC
Q ss_conf             499987178988306889898801-5099999999996798220259981----43100267743962799812432532
Q gi|254780170|r   35 FLKCGINTGLVGFAEVKANGDWKG-FDVDFCRALSSAIFDDPSKIQYLPL----NAKERFLALQSKQIDILSRNTDWTLL  109 (342)
Q Consensus        35 ~L~vGv~~~~ppfs~~d~~G~~~G-fDVDl~raiAaal~gd~~kVe~v~~----~~~~rf~aL~sG~vDil~~~~T~T~~  109 (342)
                      +||.+.  .+||       |.+.+ -...+++.|.++-.|. .+|++.+.    ...+.+.++++|.+|+...+...-..
T Consensus        10 tlk~~~--~~p~-------~~~~~~~~~~fa~~v~e~s~G~-v~i~v~~~g~Lg~~~e~~~~v~~G~vd~~~~~~~~~~~   79 (327)
T 2hpg_A           10 TLRFGH--VLAP-------GEPYHQAFLKWAKAVEEKTNGD-VRIEVFPSSQLGVEEDIIEQIRMGAPVGWNTDSARLGM   79 (327)
T ss_dssp             EEEEEC--CCST-------TSHHHHHHHHHHHHHHHHTTTS-EEEEEECCCCSCCCCCHHHHHHHTCSEEEEEEHHHHTT
T ss_pred             EEEEEC--CCCC-------CCHHHHHHHHHHHHHHHHCCCE-EEEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCHHHH
T ss_conf             999978--8899-------8989999999999999876992-99999668766887999999976997067324301212


Q ss_pred             CHHC--------------------------------------------CCCCCCCCCCCCCEEEEEECCCCCCCHHHHCC
Q ss_conf             0110--------------------------------------------27843532234402346302113475364178
Q gi|254780170|r  110 REIS--------------------------------------------LGLAFRPITYFDGQGFIMHKKKGISSVSQLSG  145 (342)
Q Consensus       110 Rd~~--------------------------------------------~~v~Fs~~~~~dgq~~lVrk~~~i~s~~dL~G  145 (342)
                      ....                                            .++-+-..++..+..++.. +..|++++||+|
T Consensus        80 ~~p~~~~~~lPfl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~~-~~pi~s~~DlkG  158 (327)
T 2hpg_A           80 YVKDIGVMNLAYFIDFMGAKTPEEAIEVLKKIKQSPTMQKWLKELEQRFGIKVLSFYWVQGYRHFVT-NKPIRKPEDLNG  158 (327)
T ss_dssp             TSGGGGGGGSTTHHHHTTCCSHHHHHHHHHHHHTSHHHHHHHHHHHHHHCEEEEEEEEEEEEEEEEE-SSCCSSGGGGTT
T ss_pred             HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEC-CCCCCCHHHHCC
T ss_conf             5666320234200466555888999999999864989999999998862984231212576056765-888899799779


Q ss_pred             CCEEEEECCCHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCHHHCCCCCCCCCCC
Q ss_conf             62034313426999999998629985078747989999998739602998250479999983678001002564442371
Q gi|254780170|r  146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP  225 (342)
Q Consensus       146 ~~I~v~~GTT~e~~l~~~~~~~~~~~~~v~~~~~~~a~~al~~Gr~DA~~~D~s~La~~~~~~~~p~~~~il~e~iskEP  225 (342)
                      +||-+. |+..   ..++++.-|.  ++|.. ...|.+.+|++|.+|+..+-.+.+...+  +..--+|.+.+. ...-+
T Consensus       159 ~kiR~~-g~~~---~~~~~~~~Ga--~pv~~-~~~ev~~aLqtG~iDg~~~~~~~~~~~~--~~e~~~~~t~~~-~~~~~  228 (327)
T 2hpg_A          159 LRIRTP-GAPA---WQESIRSLGA--IPVAV-NFGEIYTAVQTRAVDGAELTYANVYNGG--LYEVLKYMSETG-HFLLI  228 (327)
T ss_dssp             CEEECC-SSHH---HHHHHHHHTS--EEECC-CGGGHHHHHHTTSCSEEEECHHHHHHTT--GGGTCCEEEEEE-EEEEE
T ss_pred             CEEEEC-CCHH---HHHHHHHCCC--CCCCC-CCCCHHHHHHCCCEEEEEECCCCCCCCC--CEEEECEEECCC-CCCCH
T ss_conf             859844-8747---8999997388--31046-7641667987586458972420001355--000204586289-75420


Q ss_pred             EEEEC
Q ss_conf             01000
Q gi|254780170|r  226 LAPAI  230 (342)
Q Consensus       226 lg~av  230 (342)
                      ...++
T Consensus       229 ~~~~~  233 (327)
T 2hpg_A          229 NFEIV  233 (327)
T ss_dssp             EEEEE
T ss_pred             HHHHH
T ss_conf             58871