HHsearch results for GI: 254780170 and protein with PDBid: 2hpg_A
>2hpg_A ABC transporter, periplasmic substrate-binding protein; periplasmic binding protein, thermophilic proteins, trap- transport; HET: MSE; 1.90A {Thermotoga maritima}
Probab=97.26 E-value=0.0035 Score=39.05 Aligned_cols=175 Identities=13% Similarity=0.098 Sum_probs=99.0
Q ss_pred EEEEEEECCCCCCEEECCCCCEEE-EHHHHHHHHHHHHCCCCCEEEEEEC----CCCCCHHHHHCCCEEEEEECCCCCCC
Q ss_conf 499987178988306889898801-5099999999996798220259981----43100267743962799812432532
Q gi|254780170|r 35 FLKCGINTGLVGFAEVKANGDWKG-FDVDFCRALSSAIFDDPSKIQYLPL----NAKERFLALQSKQIDILSRNTDWTLL 109 (342)
Q Consensus 35 ~L~vGv~~~~ppfs~~d~~G~~~G-fDVDl~raiAaal~gd~~kVe~v~~----~~~~rf~aL~sG~vDil~~~~T~T~~ 109 (342)
+||.+. .+|| |.+.+ -...+++.|.++-.|. .+|++.+. ...+.+.++++|.+|+...+...-..
T Consensus 10 tlk~~~--~~p~-------~~~~~~~~~~fa~~v~e~s~G~-v~i~v~~~g~Lg~~~e~~~~v~~G~vd~~~~~~~~~~~ 79 (327)
T 2hpg_A 10 TLRFGH--VLAP-------GEPYHQAFLKWAKAVEEKTNGD-VRIEVFPSSQLGVEEDIIEQIRMGAPVGWNTDSARLGM 79 (327)
T ss_dssp EEEEEC--CCST-------TSHHHHHHHHHHHHHHHHTTTS-EEEEEECCCCSCCCCCHHHHHHHTCSEEEEEEHHHHTT
T ss_pred EEEEEC--CCCC-------CCHHHHHHHHHHHHHHHHCCCE-EEEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCHHHH
T ss_conf 999978--8899-------8989999999999999876992-99999668766887999999976997067324301212
Q ss_pred CHHC--------------------------------------------CCCCCCCCCCCCCEEEEEECCCCCCCHHHHCC
Q ss_conf 0110--------------------------------------------27843532234402346302113475364178
Q gi|254780170|r 110 REIS--------------------------------------------LGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 (342)
Q Consensus 110 Rd~~--------------------------------------------~~v~Fs~~~~~dgq~~lVrk~~~i~s~~dL~G 145 (342)
.... .++-+-..++..+..++.. +..|++++||+|
T Consensus 80 ~~p~~~~~~lPfl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~~-~~pi~s~~DlkG 158 (327)
T 2hpg_A 80 YVKDIGVMNLAYFIDFMGAKTPEEAIEVLKKIKQSPTMQKWLKELEQRFGIKVLSFYWVQGYRHFVT-NKPIRKPEDLNG 158 (327)
T ss_dssp TSGGGGGGGSTTHHHHTTCCSHHHHHHHHHHHHTSHHHHHHHHHHHHHHCEEEEEEEEEEEEEEEEE-SSCCSSGGGGTT
T ss_pred HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEC-CCCCCCHHHHCC
T ss_conf 5666320234200466555888999999999864989999999998862984231212576056765-888899799779
Q ss_pred CCEEEEECCCHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCHHHCCCCCCCCCCC
Q ss_conf 62034313426999999998629985078747989999998739602998250479999983678001002564442371
Q gi|254780170|r 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225 (342)
Q Consensus 146 ~~I~v~~GTT~e~~l~~~~~~~~~~~~~v~~~~~~~a~~al~~Gr~DA~~~D~s~La~~~~~~~~p~~~~il~e~iskEP 225 (342)
+||-+. |+.. ..++++.-|. ++|.. ...|.+.+|++|.+|+..+-.+.+...+ +..--+|.+.+. ...-+
T Consensus 159 ~kiR~~-g~~~---~~~~~~~~Ga--~pv~~-~~~ev~~aLqtG~iDg~~~~~~~~~~~~--~~e~~~~~t~~~-~~~~~ 228 (327)
T 2hpg_A 159 LRIRTP-GAPA---WQESIRSLGA--IPVAV-NFGEIYTAVQTRAVDGAELTYANVYNGG--LYEVLKYMSETG-HFLLI 228 (327)
T ss_dssp CEEECC-SSHH---HHHHHHHHTS--EEECC-CGGGHHHHHHTTSCSEEEECHHHHHHTT--GGGTCCEEEEEE-EEEEE
T ss_pred CEEEEC-CCHH---HHHHHHHCCC--CCCCC-CCCCHHHHHHCCCEEEEEECCCCCCCCC--CEEEECEEECCC-CCCCH
T ss_conf 859844-8747---8999997388--31046-7641667987586458972420001355--000204586289-75420
Q ss_pred EEEEC
Q ss_conf 01000
Q gi|254780170|r 226 LAPAI 230 (342)
Q Consensus 226 lg~av 230 (342)
...++
T Consensus 229 ~~~~~ 233 (327)
T 2hpg_A 229 NFEIV 233 (327)
T ss_dssp EEEEE
T ss_pred HHHHH
T ss_conf 58871