HHsearch results for GI: 254780170 and protein with PDBid: 2pyy_A
>2pyy_A Ionotropic glutamate receptor bacterial homologue; GLUR0 ligand binding domain, transport protein; HET: GLU; 2.10A {Nostoc punctiforme pcc 73102}
Probab=99.96 E-value=4.8e-28 Score=196.58 Aligned_cols=202 Identities=16% Similarity=0.252 Sum_probs=167.8
Q ss_pred CEEEEEEECCCCCCEEECCCCCEEEEHHHHHHHHHHHHCCCCCEEEEEEC-CCCCCHHHHHCCCEEEEEECCCCCCCCHH
Q ss_conf 94999871789883068898988015099999999996798220259981-43100267743962799812432532011
Q gi|254780170|r 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL-NAKERFLALQSKQIDILSRNTDWTLLREI 112 (342)
Q Consensus 34 G~L~vGv~~~~ppfs~~d~~G~~~GfDVDl~raiAaal~gd~~kVe~v~~-~~~~rf~aL~sG~vDil~~~~T~T~~Rd~ 112 (342)
-.|++|+. .+|||+| +++|+++||++|+++++|+.++ .+++|++. +|..++.+|++|++|++++++++|++|+.
T Consensus 3 ~~l~v~~~-~~PPf~~-~~~g~~~G~~~di~~~i~~~lg---~~~~~v~~~~~~~~~~~l~~g~~Di~~~~~~~t~~r~~ 77 (228)
T 2pyy_A 3 QPLLVATR-VIPPFVL-SNKGELSGFSIDLWRSIATQIG---IESKLIEYSSVPELISAIKDNKVNLGIAAISITAEREQ 77 (228)
T ss_dssp -CEEEEEC-CBTTTBB-CC---CBSHHHHHHHHHHHHHT---CCEEEEECSSHHHHHHHHHTTSCSEECSSCBCCHHHHH
T ss_pred CCEEEEEC-CCCCEEE-CCCCEEEEEHHHHHHHHHHHHC---CCEEEEECCCHHHHHHHHHCCCCCEEEECCCCCHHHHH
T ss_conf 64899967-7198187-4499688859999999999969---97399967999999999985997667102557988985
Q ss_pred CCCCCCCCCCCCCCEEEEEECC----CCCCCHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHC
Q ss_conf 0278435322344023463021----134753641786203431342699999999862998507874798999999873
Q gi|254780170|r 113 SLGLAFRPITYFDGQGFIMHKK----KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 (342)
Q Consensus 113 ~~~v~Fs~~~~~dgq~~lVrk~----~~i~s~~dL~G~~I~v~~GTT~e~~l~~~~~~~~~~~~~v~~~~~~~a~~al~~ 188 (342)
. ++|+.|+|.++..++++++ ..+.++++|+|++|++..|++.+..++ .. ..+++.+++..+++.+|.+
T Consensus 78 ~--~~~s~p~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~i~~~~g~~~~~~l~----~~--~~~~~~~~~~~~~~~~l~~ 149 (228)
T 2pyy_A 78 N--FDFSLPIFASGLQIMVRNLESGTGDIRSIDDLPGKVVATTAGSTAATYLR----EH--HISVLEVPKIEEAYKALQT 149 (228)
T ss_dssp H--SEECSCSEEEEEEEEEEC-----CCCCSGGGCTTCEEEEETTSHHHHHHH----HT--TCEEEEESSHHHHHHHHHT
T ss_pred H--CCCCCCCCCCCCEEEEECCCCCCCCCCCHHHCCCCEEEECCCCHHHHHHH----HH--HCCCHHHHHHHHHHHHHHC
T ss_conf 3--44678721256136763144565345887882998898438968999998----75--2021113248888878645
Q ss_pred CCEEEEEECCHHHHHHHHHCCCCHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHH
Q ss_conf 96029982504799999836780010025644423710100027775799998877443311
Q gi|254780170|r 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 (342)
Q Consensus 189 Gr~DA~~~D~s~La~~~~~~~~p~~~~il~e~iskEPlg~avr~gD~~w~d~V~W~~~ali~ 250 (342)
||||+++.|...+......... ....++...+..+|++++.++ |+++.+.++..+..|..
T Consensus 150 gr~d~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~l~~~ln~~l~~l~~ 209 (228)
T 2pyy_A 150 KKADAVVFDAPVLLFYAANEGK-GKVEIVGSILREESYGIILPN-NSPYRKPINQALLNLKE 209 (228)
T ss_dssp TSSSEEEEEHHHHHHHHHTTTT-TTEEEEEEEEEEEEECCEECT-TCTTHHHHHHHHHHHHH
T ss_pred CCEEEEEECHHHHHHHHHHCCC-CCEEECCCCCCCCEEEEEECC-CHHHHHHHHHHHHHHHH
T ss_conf 9467999631888999984688-835883466766328999779-98999999999999997