HHsearch results for GI: 254780170 and protein with PDBid: 2rin_A
>2rin_A Putative glycine betaine-binding ABC transporter protein; type II binding protein, aromatic BOX, acetylcholine, protein binding; HET: ACH; 1.80A {Rhizobium meliloti} PDB: 2rej_A 2rf1_A 2reg_A* 3hcq_A
Probab=96.53 E-value=0.0071 Score=37.13 Aligned_cols=132 Identities=14% Similarity=0.162 Sum_probs=77.6
Q ss_pred HHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHCCCEEEEEECCCCCCCCH-------HCCCCCCCCCCCCC-CEEEEEEC
Q ss_conf 99999999967982202599814310026774396279981243253201-------10278435322344-02346302
Q gi|254780170|r 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE-------ISLGLAFRPITYFD-GQGFIMHK 133 (342)
Q Consensus 62 Dl~raiAaal~gd~~kVe~v~~~~~~rf~aL~sG~vDil~~~~T~T~~Rd-------~~~~v~Fs~~~~~d-gq~~lVrk 133 (342)
.+.+.+-.++| -+|+.++.+....+.+|.+|+||+.... |.+... ....+.-..+.+.. .+++.|++
T Consensus 24 ~i~~~vLe~~G---y~Ve~~~~~~~~~~~al~~GdID~~~e~--W~p~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~ 98 (298)
T 2rin_A 24 ATATTILEALG---YETDVKVLSVPVTYTSLKNKDIDVFLGN--WMPTMEADIAPYREDKSVETVRENLAGAKYTLATNA 98 (298)
T ss_dssp HHHHHHHHHHT---CEEEEECCCHHHHHHHHHHTSCCEEEEE--EETTTHHHHHHHHTTTSEEEEEEEEEEEEEEEEEEH
T ss_pred HHHHHHHHHCC---CCEEEEECCHHHHHHHHHCCCCEEEEEC--CCCCCHHHHHHHHHHCCCEECCCCCCCCEEEEEECC
T ss_conf 99999999869---9248986870999999987998088404--664001667998861453111444568615887530
Q ss_pred C---CCCCCHHHHC-------CCCEEEEECCCHHHHHHHHHHHCCCCC--CEEEECCHH----HHHHHHHCCCEEEEEEC
Q ss_conf 1---1347536417-------862034313426999999998629985--078747989----99999873960299825
Q gi|254780170|r 134 K---KGISSVSQLS-------GASICVQAGTTTELTLADYFKAHNMKY--HPIVFERVE----EIDAAYRAHRCDAYTGD 197 (342)
Q Consensus 134 ~---~~i~s~~dL~-------G~~I~v~~GTT~e~~l~~~~~~~~~~~--~~v~~~~~~----~a~~al~~Gr~DA~~~D 197 (342)
. .+|++++||. +..++...|..............++.. ..+...+.. +...++.+|+++++..=
T Consensus 99 ~~a~~~i~sisDL~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~~a~l~~A~~~~~~~v~~~w 178 (298)
T 2rin_A 99 KGAELGIKDFKDIAAHKDELDGKIYGIEPGNDGNRLIIDMVEKGTFDLKGFEVVESSEQGMLAQVARAEKSGDPIVFLGW 178 (298)
T ss_dssp HHHHHTCCBGGGSGGGHHHHTSEEECCSTTCHHHHHHHHHHHHTGGGCTTCEEECCCHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred HHHHCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf 44442767477776535523774672256422243314566650268876542046467799999999846885799826
Q ss_pred C
Q ss_conf 0
Q gi|254780170|r 198 I 198 (342)
Q Consensus 198 ~ 198 (342)
.
T Consensus 179 ~ 179 (298)
T 2rin_A 179 E 179 (298)
T ss_dssp E
T ss_pred C
T ss_conf 8