HHsearch results for GI: 254780170 and protein with PDBid: 2rin_A

>2rin_A Putative glycine betaine-binding ABC transporter protein; type II binding protein, aromatic BOX, acetylcholine, protein binding; HET: ACH; 1.80A {Rhizobium meliloti} PDB: 2rej_A 2rf1_A 2reg_A* 3hcq_A
Probab=96.53  E-value=0.0071  Score=37.13  Aligned_cols=132  Identities=14%  Similarity=0.162  Sum_probs=77.6

Q ss_pred             HHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHCCCEEEEEECCCCCCCCH-------HCCCCCCCCCCCCC-CEEEEEEC
Q ss_conf             99999999967982202599814310026774396279981243253201-------10278435322344-02346302
Q gi|254780170|r   62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE-------ISLGLAFRPITYFD-GQGFIMHK  133 (342)
Q Consensus        62 Dl~raiAaal~gd~~kVe~v~~~~~~rf~aL~sG~vDil~~~~T~T~~Rd-------~~~~v~Fs~~~~~d-gq~~lVrk  133 (342)
                      .+.+.+-.++|   -+|+.++.+....+.+|.+|+||+....  |.+...       ....+.-..+.+.. .+++.|++
T Consensus        24 ~i~~~vLe~~G---y~Ve~~~~~~~~~~~al~~GdID~~~e~--W~p~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~   98 (298)
T 2rin_A           24 ATATTILEALG---YETDVKVLSVPVTYTSLKNKDIDVFLGN--WMPTMEADIAPYREDKSVETVRENLAGAKYTLATNA   98 (298)
T ss_dssp             HHHHHHHHHHT---CEEEEECCCHHHHHHHHHHTSCCEEEEE--EETTTHHHHHHHHTTTSEEEEEEEEEEEEEEEEEEH
T ss_pred             HHHHHHHHHCC---CCEEEEECCHHHHHHHHHCCCCEEEEEC--CCCCCHHHHHHHHHHCCCEECCCCCCCCEEEEEECC
T ss_conf             99999999869---9248986870999999987998088404--664001667998861453111444568615887530


Q ss_pred             C---CCCCCHHHHC-------CCCEEEEECCCHHHHHHHHHHHCCCCC--CEEEECCHH----HHHHHHHCCCEEEEEEC
Q ss_conf             1---1347536417-------862034313426999999998629985--078747989----99999873960299825
Q gi|254780170|r  134 K---KGISSVSQLS-------GASICVQAGTTTELTLADYFKAHNMKY--HPIVFERVE----EIDAAYRAHRCDAYTGD  197 (342)
Q Consensus       134 ~---~~i~s~~dL~-------G~~I~v~~GTT~e~~l~~~~~~~~~~~--~~v~~~~~~----~a~~al~~Gr~DA~~~D  197 (342)
                      .   .+|++++||.       +..++...|..............++..  ..+...+..    +...++.+|+++++..=
T Consensus        99 ~~a~~~i~sisDL~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~~a~l~~A~~~~~~~v~~~w  178 (298)
T 2rin_A           99 KGAELGIKDFKDIAAHKDELDGKIYGIEPGNDGNRLIIDMVEKGTFDLKGFEVVESSEQGMLAQVARAEKSGDPIVFLGW  178 (298)
T ss_dssp             HHHHHTCCBGGGSGGGHHHHTSEEECCSTTCHHHHHHHHHHHHTGGGCTTCEEECCCHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred             HHHHCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf             44442767477776535523774672256422243314566650268876542046467799999999846885799826


Q ss_pred             C
Q ss_conf             0
Q gi|254780170|r  198 I  198 (342)
Q Consensus       198 ~  198 (342)
                      .
T Consensus       179 ~  179 (298)
T 2rin_A          179 E  179 (298)
T ss_dssp             E
T ss_pred             C
T ss_conf             8