HHsearch results for GI: 254780170 and protein with PDBid: 2v3u_A
>2v3u_A Glutamate receptor delta-2 subunit; postsynaptic membrane, ionotropic glutamate receptors, transmembrane, membrane protein; 1.74A {Rattus norvegicus} PDB: 2v3t_A
Probab=99.93 E-value=8e-25 Score=176.17 Aligned_cols=207 Identities=15% Similarity=0.094 Sum_probs=156.2
Q ss_pred CEEEEEEECCCCCCEEECCC-----CCEEEEHHHHHHHHHHHHCCCCCEEEEEECC------------CCCCHHHHHCCC
Q ss_conf 94999871789883068898-----9880150999999999967982202599814------------310026774396
Q gi|254780170|r 34 GFLKCGINTGLVGFAEVKAN-----GDWKGFDVDFCRALSSAIFDDPSKIQYLPLN------------AKERFLALQSKQ 96 (342)
Q Consensus 34 G~L~vGv~~~~ppfs~~d~~-----G~~~GfDVDl~raiAaal~gd~~kVe~v~~~------------~~~rf~aL~sG~ 96 (342)
.+||||+.. .|||.|.+++ |+++||||||+++||+.++ .+++|+.+. |...+..+.+|+
T Consensus 3 ~~lrV~~~~-~pP~~~~~~~~~g~~~~~~G~~vdl~~~ia~~lg---~~~e~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 78 (265)
T 2v3u_A 3 VVLRVVTVL-EEPFVMVSENVLGKPKKYQGFSIDVLDALSNYLG---FNYEIYVAPDHKYGSPQEDGTWNGLVGELVFKR 78 (265)
T ss_dssp CEEEEEECC-BTTTBEEECCSTTCCCEEESHHHHHHHHHHHHHT---CEEEEEECTTCCCCCBCTTSCBCHHHHHHHTTS
T ss_pred CEEEEEECC-CCCCEEECCCCCCCCCCEEEEHHHHHHHHHHHHC---CCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCC
T ss_conf 689999855-5997798067789999788809999999999839---967999846753143126888899877760685
Q ss_pred EEEEEECCCCCCCCHHCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHCCCCEEEEECCCHHHHHHHHHHH----------
Q ss_conf 2799812432532011027843532234402346302113475364178620343134269999999986----------
Q gi|254780170|r 97 IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA---------- 166 (342)
Q Consensus 97 vDil~~~~T~T~~Rd~~~~v~Fs~~~~~dgq~~lVrk~~~i~s~~dL~G~~I~v~~GTT~e~~l~~~~~~---------- 166 (342)
+|++++++|+|++| ...++|+.|||.+++++++++........++.++. +...|++......+.+..
T Consensus 79 ~D~~~~~~~~t~~R--~~~~~fs~py~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (265)
T 2v3u_A 79 ADIGISALTITPDR--ENVVDFTTRYMDYSVGVLLRRGTSIQSLQDLSKQT-DIPYGTVLDSAVYQHVRMKGLNPFERDS 155 (265)
T ss_dssp CSEECSSCBCCHHH--HTTEEECSCSEEECEEEEEETTCCCCSHHHHHTCS-SSCEECBTTSHHHHHHHHHHTCTTCSCT
T ss_pred EEEEECCCCCCHHH--HHHEEECCCEEECCEEEEECCCCCCCCHHHHCCCE-EEEEEEEECHHHHHHHHHCCCCCCCCCH
T ss_conf 43660446546777--52152046436513344420235532256746862-5664013001799999863875211202
Q ss_pred ---------CCCCCCEEEECCHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCHHHCCCCCCCCCCCEEEECCCCCHHH
Q ss_conf ---------29985078747989999998739602998250479999983678001002564442371010002777579
Q gi|254780170|r 167 ---------HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 (342)
Q Consensus 167 ---------~~~~~~~v~~~~~~~a~~al~~Gr~DA~~~D~s~La~~~~~~~~p~~~~il~e~iskEPlg~avr~gD~~w 237 (342)
.....+++.+.+..+++.++..|+ |+++.|...+...... ..+.++.++++.++.+|++++++|++ +|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~-~~~i~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~K~s-~l 232 (265)
T 2v3u_A 156 MYSQMWRMINRSNGSENNVLESQAGIQKVKYGN-YAFVWDAAVLEYVAIN-DPDCSFYTVGNTVADRGYGIALQHGS-PY 232 (265)
T ss_dssp HHHHHHHHHCC-----CCBSSHHHHHHHHHHSS-CEEEEEHHHHHHHHHH-CTTCCEEEEC---CCEEECCEEETTC-TT
T ss_pred HHHHHHHHHHCCCCCCEECCCHHHHHHHHHCCC-EEEEECHHHHHHHHHH-CCCCCEEECCCCCCCCEEEEEEECCH-HH
T ss_conf 578999987315540011168999999997699-0999537999999985-78975898157777733899996981-99
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9998877443311
Q gi|254780170|r 238 YNIVSWTHYAMVT 250 (342)
Q Consensus 238 ~d~V~W~~~ali~ 250 (342)
++.++..+..|..
T Consensus 233 ~~~~n~~l~~~~~ 245 (265)
T 2v3u_A 233 RDVFSQRILELQQ 245 (265)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999999999997