HHsearch results for GI: 254780170 and protein with PDBid: 3k4u_A
>3k4u_A Binding component of ABC transporter; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: LYS; 2.62A {Wolinella succinogenes}
Probab=100.00 E-value=3.2e-31 Score=216.71 Aligned_cols=210 Identities=21% Similarity=0.281 Sum_probs=177.9
Q ss_pred HHCCEEEEEEECCCCCCEEECCCCCEEEEHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHCCCEEEEEECCCCCCCC
Q ss_conf 85794999871789883068898988015099999999996798220259981431002677439627998124325320
Q gi|254780170|r 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 (342)
Q Consensus 31 k~rG~L~vGv~~~~ppfs~~d~~G~~~GfDVDl~raiAaal~gd~~kVe~v~~~~~~rf~aL~sG~vDil~~~~T~T~~R 110 (342)
+.||+||||+..++|||+|.|++|+++||++|+++++++.++ .+++|++++|..++..+.+|++|++++++++|++|
T Consensus 2 ~~rg~lrvgv~~~~pP~~~~d~~g~~~G~~~Dl~~~i~~~lg---~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r 78 (245)
T 3k4u_A 2 SLRGELRVGLEPGYLPFEMKDKKGNVIGFDVDLAREMAKAMG---VKLKLVPTSWDGLIPGLVTEKFDIIISGMTISQER 78 (245)
T ss_dssp -CCSEEEEEECTTSTTTCEEETTTEEESHHHHHHHHHHHHHT---CEEEEEECCGGGHHHHHHTTSCSEECSSCBCCHHH
T ss_pred CCCCEEEEEECCCCCCCEEECCCCCEEEHHHHHHHHHHHHHC---CCEEEEECCHHHHHHHHHCCCCCEEEECCCCCHHH
T ss_conf 988789999828988936899999888729999999999949---96699733708889998669977898678568777
Q ss_pred HHCCCCCCCCCCCCCCEEEEEECCC--CCCCHHHHCCCC--EEEEECCCHHHHHHHHHHHCCCCCCEEEECCHHHHHHHH
Q ss_conf 1102784353223440234630211--347536417862--034313426999999998629985078747989999998
Q gi|254780170|r 111 EISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGAS--ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 (342)
Q Consensus 111 d~~~~v~Fs~~~~~dgq~~lVrk~~--~i~s~~dL~G~~--I~v~~GTT~e~~l~~~~~~~~~~~~~v~~~~~~~a~~al 186 (342)
+ ..++|+.|+++++..+++++++ .+.+..++.+++ +++..|++.+. +.+......+++.+++..+++.+|
T Consensus 79 ~--~~~~~s~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~~~~~~~l~~L 152 (245)
T 3k4u_A 79 N--LRVNFVEPYIVVGQSLLVKKGLEKGVKSYKDLDKPELTLVTKFGVSAEY----AAKRLFKNAKLKTYDTEAEAVQEV 152 (245)
T ss_dssp H--TTSEECSCSEEECEEEEEETTTTTTCCSGGGGCCSSCEEEEETTSHHHH----HHHHHCSSSEEEEESSHHHHHHHH
T ss_pred H--HHCCCCCCEECCCCCCHHCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHH----HHHHHCCCCEEEEEECCHHHHHHH
T ss_conf 7--5334678612044110001465444678778514554213477723789----999737786289984217899999
Q ss_pred HCCCEEEEEECCHHHHHHHHHCCCCHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHH
Q ss_conf 7396029982504799999836780010025644423710100027775799998877443311
Q gi|254780170|r 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 (342)
Q Consensus 187 ~~Gr~DA~~~D~s~La~~~~~~~~p~~~~il~e~iskEPlg~avr~gD~~w~d~V~W~~~ali~ 250 (342)
.+||||+++.|...+.......+ +....+++..++.+|+++++|++|++|.+.++..+..|.+
T Consensus 153 ~~GrvD~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~k~~~~l~~~in~~l~~l~~ 215 (245)
T 3k4u_A 153 LNGKADMFIFDLPFNVAFMAQKG-QGYLVHLDTSLTYEPLGWAIKKGDPDFLNWLNHFLAQIKH 215 (245)
T ss_dssp HSSSSEEEEEEHHHHHHHHHHTT-TTTEEEECCCCSCEEECCEECTTCHHHHHHHHHHHHHHHH
T ss_pred HCCCCCEEEECCHHHHHHHHHCC-CCCCCEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHH
T ss_conf 77996599973277779998648-7664212214777618999969999999999999999996