HHsearch results for GI: 254780170 and protein with PDBid: 3ksx_A

>3ksx_A Nitrate transport protein; SSUA, alkanesulfonate-binding protein, periplasmic-binding P transport protein; HET: MPO; 1.70A {Xanthomonas axonopodis PV} PDB: 3e4r_A* 3ksj_A*
Probab=99.46  E-value=1.4e-12  Score=98.61  Aligned_cols=203  Identities=17%  Similarity=0.175  Sum_probs=125.3

Q ss_pred             HCCEEEEEEECCCCCCEEECCCCCEEEEHHHHHHH--HHHHHCCCCCEEEEEECCC-CCCHHHHHCCCEEEEEECCC-CC
Q ss_conf             57949998717898830688989880150999999--9999679822025998143-10026774396279981243-25
Q gi|254780170|r   32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA--LSSAIFDDPSKIQYLPLNA-KERFLALQSKQIDILSRNTD-WT  107 (342)
Q Consensus        32 ~rG~L~vGv~~~~ppfs~~d~~G~~~GfDVDl~ra--iAaal~gd~~kVe~v~~~~-~~rf~aL~sG~vDil~~~~T-~T  107 (342)
                      +..+||+|+.+.+.|+-              +++.  +-+.-+.+ .+|+|+..+. .....+|.+|++|+...+.+ ..
T Consensus        27 ~~~~lrIg~~~~~~~~~--------------va~~~G~f~~~~~~-~~v~~~~~~~g~~~~~al~sG~~D~~~~~~~~~~   91 (324)
T 3ksx_A           27 EPAQLRIGYQKAVSSLV--------------LAKQHRLLEQRFPR-TKITWVEFPAGPQLLEALNVGSIDLGGAGDIPPL   91 (324)
T ss_dssp             CCSEEEEEEETTCHHHH--------------HHHHHTHHHHHCTT-SEEEEEEESSHHHHHHHHHTTSCSEEEEESHHHH
T ss_pred             CCCEEEEEEECCCCHHH--------------HHHHHCHHHHHCCC-CCEEEEECCCHHHHHHHHHCCCCCEEEECHHHHH
T ss_conf             99759999616865799--------------99984869783899-8279997897799999998499288964659999


Q ss_pred             CCCHHCCCCCCCC--CCCC--CCEEEEEECCCCCCCHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCC---CEEEECCHH
Q ss_conf             3201102784353--2234--40234630211347536417862034313426999999998629985---078747989
Q gi|254780170|r  108 LLREISLGLAFRP--ITYF--DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY---HPIVFERVE  180 (342)
Q Consensus       108 ~~Rd~~~~v~Fs~--~~~~--dgq~~lVrk~~~i~s~~dL~G~~I~v~~GTT~e~~l~~~~~~~~~~~---~~v~~~~~~  180 (342)
                      ..|  ..+.++..  .++.  .+..++++++++|++++||+||+|++..|++.+..+..++++.|++.   +++.. +..
T Consensus        92 ~~~--~~G~~~~~v~~~~~~~~~~~iv~~~~s~i~s~~DLkGK~v~v~~gs~~~~~l~~~L~~~Gl~~~dV~~v~~-~~~  168 (324)
T 3ksx_A           92 FAQ--AAGADLLYVGWVPPTPKAETILVPSKSALRTVADLKGKRIAFQKGSSAHNLLLRVLAKSGLSMRDITPLYL-SPA  168 (324)
T ss_dssp             HHH--HTTCCEEEEEEECCCGGGEEEEEETTCSCCSGGGGTTCEEEECTTSHHHHHHHHHHHHTTCCGGGSEEEEC-CHH
T ss_pred             HHH--HCCCCEEEEEEEECCCCCEEEEEECCCCCCCHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCEEEC-CHH
T ss_conf             999--87998599998963798428998089999997893899898756873067999999987997323540125-826


Q ss_pred             HHHHHHHCCCEEEEEECCHHHHHHHHHCCCCHHHCCCCCCCCCCCEEEECCCCC--HHHHHHHHHHHHHHHHHHHHH
Q ss_conf             999998739602998250479999983678001002564442371010002777--579999887744331121233
Q gi|254780170|r  181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD--TEWYNIVSWTHYAMVTAEELG  255 (342)
Q Consensus       181 ~a~~al~~Gr~DA~~~D~s~La~~~~~~~~p~~~~il~e~iskEPlg~avr~gD--~~w~d~V~W~~~ali~Aee~g  255 (342)
                      +...+|.+|++|+++.-.+.......   +...+++....-...|....+-..+  .+-.++|+-.+.++..|.++-
T Consensus       169 ~~~~al~~G~vDa~~~~~p~~~~~~~---~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~v~~fl~a~~~a~~~~  242 (324)
T 3ksx_A          169 NARAAFAAGQVDAWAIWDPWYSALTL---DGSARLLANGEGLGLTGGFFLSSRRYATAWGPFVQQVMGTLNQADGLL  242 (324)
T ss_dssp             HHHHHHHTTCCSEEEEETTHHHHHHH---TTSEEEEEESTTSCCCCEEEEEEHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHCCCCCEEEECCHHHHHHHH---CCCCEEEECCCCCCCCCCEEEECHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_conf             66666531350099981579999997---499489971444687664389858888679899999999999999999