HHsearch results for GI: 254780170 and protein with PDBid: 3ksx_A
>3ksx_A Nitrate transport protein; SSUA, alkanesulfonate-binding protein, periplasmic-binding P transport protein; HET: MPO; 1.70A {Xanthomonas axonopodis PV} PDB: 3e4r_A* 3ksj_A*
Probab=99.46 E-value=1.4e-12 Score=98.61 Aligned_cols=203 Identities=17% Similarity=0.175 Sum_probs=125.3
Q ss_pred HCCEEEEEEECCCCCCEEECCCCCEEEEHHHHHHH--HHHHHCCCCCEEEEEECCC-CCCHHHHHCCCEEEEEECCC-CC
Q ss_conf 57949998717898830688989880150999999--9999679822025998143-10026774396279981243-25
Q gi|254780170|r 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA--LSSAIFDDPSKIQYLPLNA-KERFLALQSKQIDILSRNTD-WT 107 (342)
Q Consensus 32 ~rG~L~vGv~~~~ppfs~~d~~G~~~GfDVDl~ra--iAaal~gd~~kVe~v~~~~-~~rf~aL~sG~vDil~~~~T-~T 107 (342)
+..+||+|+.+.+.|+- +++. +-+.-+.+ .+|+|+..+. .....+|.+|++|+...+.+ ..
T Consensus 27 ~~~~lrIg~~~~~~~~~--------------va~~~G~f~~~~~~-~~v~~~~~~~g~~~~~al~sG~~D~~~~~~~~~~ 91 (324)
T 3ksx_A 27 EPAQLRIGYQKAVSSLV--------------LAKQHRLLEQRFPR-TKITWVEFPAGPQLLEALNVGSIDLGGAGDIPPL 91 (324)
T ss_dssp CCSEEEEEEETTCHHHH--------------HHHHHTHHHHHCTT-SEEEEEEESSHHHHHHHHHTTSCSEEEEESHHHH
T ss_pred CCCEEEEEEECCCCHHH--------------HHHHHCHHHHHCCC-CCEEEEECCCHHHHHHHHHCCCCCEEEECHHHHH
T ss_conf 99759999616865799--------------99984869783899-8279997897799999998499288964659999
Q ss_pred CCCHHCCCCCCCC--CCCC--CCEEEEEECCCCCCCHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCC---CEEEECCHH
Q ss_conf 3201102784353--2234--40234630211347536417862034313426999999998629985---078747989
Q gi|254780170|r 108 LLREISLGLAFRP--ITYF--DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY---HPIVFERVE 180 (342)
Q Consensus 108 ~~Rd~~~~v~Fs~--~~~~--dgq~~lVrk~~~i~s~~dL~G~~I~v~~GTT~e~~l~~~~~~~~~~~---~~v~~~~~~ 180 (342)
..| ..+.++.. .++. .+..++++++++|++++||+||+|++..|++.+..+..++++.|++. +++.. +..
T Consensus 92 ~~~--~~G~~~~~v~~~~~~~~~~~iv~~~~s~i~s~~DLkGK~v~v~~gs~~~~~l~~~L~~~Gl~~~dV~~v~~-~~~ 168 (324)
T 3ksx_A 92 FAQ--AAGADLLYVGWVPPTPKAETILVPSKSALRTVADLKGKRIAFQKGSSAHNLLLRVLAKSGLSMRDITPLYL-SPA 168 (324)
T ss_dssp HHH--HTTCCEEEEEEECCCGGGEEEEEETTCSCCSGGGGTTCEEEECTTSHHHHHHHHHHHHTTCCGGGSEEEEC-CHH
T ss_pred HHH--HCCCCEEEEEEEECCCCCEEEEEECCCCCCCHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCEEEC-CHH
T ss_conf 999--87998599998963798428998089999997893899898756873067999999987997323540125-826
Q ss_pred HHHHHHHCCCEEEEEECCHHHHHHHHHCCCCHHHCCCCCCCCCCCEEEECCCCC--HHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999998739602998250479999983678001002564442371010002777--579999887744331121233
Q gi|254780170|r 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD--TEWYNIVSWTHYAMVTAEELG 255 (342)
Q Consensus 181 ~a~~al~~Gr~DA~~~D~s~La~~~~~~~~p~~~~il~e~iskEPlg~avr~gD--~~w~d~V~W~~~ali~Aee~g 255 (342)
+...+|.+|++|+++.-.+....... +...+++....-...|....+-..+ .+-.++|+-.+.++..|.++-
T Consensus 169 ~~~~al~~G~vDa~~~~~p~~~~~~~---~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~v~~fl~a~~~a~~~~ 242 (324)
T 3ksx_A 169 NARAAFAAGQVDAWAIWDPWYSALTL---DGSARLLANGEGLGLTGGFFLSSRRYATAWGPFVQQVMGTLNQADGLL 242 (324)
T ss_dssp HHHHHHHTTCCSEEEEETTHHHHHHH---TTSEEEEEESTTSCCCCEEEEEEHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCEEEECCHHHHHHHH---CCCCEEEECCCCCCCCCCEEEECHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_conf 66666531350099981579999997---499489971444687664389858888679899999999999999999