BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780170|ref|YP_003064583.1| cationic amino acid ABC transporter, periplasmic binding protein [Candidatus Liberibacter asiaticus str. psy62] (342 letters) Database: nr 13,984,884 sequences; 4,792,584,752 total letters Searching..................................................done Results from round 1 >gi|254780170|ref|YP_003064583.1| cationic amino acid ABC transporter, periplasmic binding protein [Candidatus Liberibacter asiaticus str. psy62] gi|254039847|gb|ACT56643.1| cationic amino acid ABC transporter, periplasmic binding protein [Candidatus Liberibacter asiaticus str. psy62] Length = 342 Score = 712 bits (1837), Expect = 0.0, Method: Compositional matrix adjust. Identities = 342/342 (100%), Positives = 342/342 (100%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD Sbjct: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP Sbjct: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE Sbjct: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI Sbjct: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII Sbjct: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR Sbjct: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 >gi|315122673|ref|YP_004063162.1| cationic amino acid ABC transporter, periplasmic binding protein [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313496075|gb|ADR52674.1| cationic amino acid ABC transporter, periplasmic binding protein [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 342 Score = 592 bits (1525), Expect = e-167, Method: Compositional matrix adjust. Identities = 274/342 (80%), Positives = 310/342 (90%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 MY++FF+SILCLI L FT+F T ASIL +IKKRGFLKCGINTGL GF+E++ANGDWKGFD Sbjct: 1 MYRNFFISILCLIGLTFTNFPTYASILQNIKKRGFLKCGINTGLTGFSEIQANGDWKGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDFC+ALS+AIFDD SK+QYLPLNAKERF++LQSKQIDILSRNTDWTLLRE LGLAFRP Sbjct: 61 VDFCKALSAAIFDDSSKVQYLPLNAKERFISLQSKQIDILSRNTDWTLLRETKLGLAFRP 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 ITYFDGQG +M+KK G+SS QLS ASICVQAGTTTE TLADYFKAHNMKYHPIVFERVE Sbjct: 121 ITYFDGQGLMMYKKSGVSSALQLSDASICVQAGTTTEKTLADYFKAHNMKYHPIVFERVE 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 EIDAAYR+HRCD YTGD SALYAL+L+ D P+EHVIL DIISKSPL PAI+QGD+EW NI Sbjct: 181 EIDAAYRSHRCDVYTGDKSALYALRLSTDNPNEHVILKDIISKSPLGPAILQGDSEWSNI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 VSWTHYA+V AEELGITQ N++Q T +PD++RFLGIDKS+NIGE+LGL+KDW Y+II Sbjct: 241 VSWTHYALVNAEELGITQSNVDQKRLTTNDPDMKRFLGIDKSANIGESLGLSKDWAYQII 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +HMGNYGE+FDRNLG+QS LKIPR YNALWSKGG+MYAPPIR Sbjct: 301 KHMGNYGEIFDRNLGSQSALKIPREYNALWSKGGIMYAPPIR 342 >gi|150396327|ref|YP_001326794.1| cationic amino acid ABC transporter periplasmic binding protein [Sinorhizobium medicae WSM419] gi|150027842|gb|ABR59959.1| cationic amino acid ABC transporter, periplasmic binding protein [Sinorhizobium medicae WSM419] Length = 341 Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust. Identities = 188/342 (54%), Positives = 267/342 (78%), Gaps = 1/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + +++ ++ S++ +A+ L D+K +GF++CG+NTGL GFA A+GDW GFD Sbjct: 1 MARTILTALVSAAVMGVGSYAASAATLDDVKAKGFVQCGVNTGLAGFAAPNASGDWSGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+C+A+++A+F D +K++Y PL+AKERF ALQS ++D+L+RNT W++ R+ +LG FRP Sbjct: 61 VDYCKAIAAAVFGDATKVKYTPLSAKERFPALQSGEVDVLARNTTWSINRDTALGFNFRP 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K+ + S +LSGA++CVQ GTTTEL LADYFKA+N++Y+P+VFE++E Sbjct: 121 VNYYDGQGFMVRKELDVKSALELSGAAVCVQTGTTTELNLADYFKANNLQYNPVVFEKLE 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E++AAY A RCD YT D S LY+L+LT +P +H++LP+IISK PLAPA+ QGD +W++I Sbjct: 181 EVNAAYDAGRCDVYTTDQSGLYSLRLTLSKPDDHIVLPEIISKEPLAPAVRQGDDQWFDI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 VSW HYA+V AEE G+TQ N+ ++ K + NPDVQRFLG++ S IG LGLT +W I+ Sbjct: 241 VSWVHYALVQAEEFGVTQANVEEMKK-SANPDVQRFLGVEADSKIGTDLGLTNEWAVNIV 299 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+FDRN+G S LKI RG NALW+KGGL YAPP+R Sbjct: 300 KAVGNYGEVFDRNIGAGSPLKIERGLNALWNKGGLQYAPPVR 341 >gi|15965231|ref|NP_385584.1| general L-amino acid-binding periplasmic ABC transporter protein [Sinorhizobium meliloti 1021] gi|307316996|ref|ZP_07596437.1| cationic amino acid ABC transporter, periplasmic binding protein [Sinorhizobium meliloti AK83] gi|15074411|emb|CAC46057.1| Probable general L-amino acid-binding periplasmic ABC transporter [Sinorhizobium meliloti 1021] gi|306897084|gb|EFN27829.1| cationic amino acid ABC transporter, periplasmic binding protein [Sinorhizobium meliloti AK83] Length = 341 Score = 439 bits (1128), Expect = e-121, Method: Compositional matrix adjust. Identities = 189/342 (55%), Positives = 267/342 (78%), Gaps = 1/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + +++ ++ + + +A+ L D+K +GF++CG+NTGL GFA A+G+W GFD Sbjct: 1 MARRILTALVGAAVVGIGTHAASAATLDDVKAKGFVQCGVNTGLAGFAAPDASGNWSGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+C+A+++AIF D SK++Y PL+AKERF ALQS ++D+L+RNT W++ R+ +LG FRP Sbjct: 61 VDYCKAIAAAIFGDGSKVKYTPLSAKERFPALQSGEVDVLARNTTWSINRDTALGFNFRP 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K+ + S +LSGA++CVQ GTTTEL LADYFKA+N++Y+P+VFE++E Sbjct: 121 VNYYDGQGFMVRKELDVKSALELSGAAVCVQTGTTTELNLADYFKANNLQYNPVVFEKLE 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E++AAY A RCD YT D S LY+L+LT +P +H++LP+IISK PLAPA+ QGD +W++I Sbjct: 181 EVNAAYDAGRCDVYTTDQSGLYSLRLTLSKPDDHIVLPEIISKEPLAPAVRQGDDQWFDI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 VSW HYA+V AEE G+TQ N+ ++ K +TNPDVQRFLG++ S IG LGLT +W I+ Sbjct: 241 VSWVHYALVQAEEFGVTQANLEEMKK-STNPDVQRFLGVEADSKIGTDLGLTNEWAVNIV 299 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+FDRN+G S LKI RG NALW+KGGL YAPP+R Sbjct: 300 KAVGNYGEVFDRNIGAGSPLKIERGLNALWNKGGLQYAPPVR 341 >gi|209549162|ref|YP_002281079.1| cationic amino acid ABC transporter periplasmic binding protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209534918|gb|ACI54853.1| cationic amino acid ABC transporter, periplasmic binding protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 341 Score = 438 bits (1127), Expect = e-121, Method: Compositional matrix adjust. Identities = 191/342 (55%), Positives = 262/342 (76%), Gaps = 1/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M +++ + + + +A+ LGD+K +GF++CG+NTGL GFA A+G+W GFD Sbjct: 1 MKNKLLSAVIGAAVFALGTSAASATTLGDVKAKGFVQCGVNTGLTGFAAPDASGNWAGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDFC+A++SA+F DP+K++Y P NAKERF ALQS +ID+LSRNT WT+ R+ +LG FRP Sbjct: 61 VDFCKAVASAVFGDPTKVKYTPTNAKERFTALQSGEIDVLSRNTTWTINRDTALGFNFRP 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DGQGF++ K + S +LSGA+ICVQ+GTTTEL LADYFK +N++Y+P+VFE + Sbjct: 121 VTYYDGQGFMVRKSLNVKSALELSGAAICVQSGTTTELNLADYFKTNNLQYNPVVFENLP 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E++AAY A RCD YT D S LY+L+LT P EHVILP+IISK PL PA+ QGD +W++I Sbjct: 181 EVNAAYDAGRCDVYTTDQSGLYSLRLTLKNPDEHVILPEIISKEPLGPAVRQGDDQWFDI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 VSWT YA++ AEE GITQ N++++ K++ NPD++RFLG + + IG LGLT DW +I Sbjct: 241 VSWTAYALINAEEFGITQANVDEM-KNSPNPDIKRFLGSETDTKIGTDLGLTNDWAANVI 299 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F+RN+G S LKI RG NALW+KGG+ YAPP+R Sbjct: 300 KGVGNYGEIFERNIGQGSPLKIARGLNALWNKGGIQYAPPVR 341 >gi|307309254|ref|ZP_07588922.1| cationic amino acid ABC transporter, periplasmic binding protein [Sinorhizobium meliloti BL225C] gi|306900255|gb|EFN30872.1| cationic amino acid ABC transporter, periplasmic binding protein [Sinorhizobium meliloti BL225C] Length = 341 Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust. Identities = 188/342 (54%), Positives = 267/342 (78%), Gaps = 1/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + +++ ++ + + +A+ L D+K +GF++CG+NTGL GFA A+G+W GFD Sbjct: 1 MARRILTALVGAAVVGIGTHAASAATLDDVKAKGFVQCGVNTGLAGFAAPDASGNWSGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+C+A+++AIF D SK++Y PL+AKERF ALQS ++D+L+RNT W++ R+ +LG FRP Sbjct: 61 VDYCKAIAAAIFGDGSKVKYTPLSAKERFPALQSGEVDVLARNTTWSINRDTALGFNFRP 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K+ + S +LSGA++CVQ GTTTEL LADYFKA+N++Y+P+VFE++E Sbjct: 121 VNYYDGQGFMVRKELDVKSALELSGAAVCVQTGTTTELNLADYFKANNLQYNPVVFEKLE 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E++AAY A RCD YT D S LY+L+LT +P +H++LP+IISK PLAPA+ QGD +W++I Sbjct: 181 EVNAAYDAGRCDVYTTDQSGLYSLRLTLSKPDDHIVLPEIISKEPLAPAVRQGDDQWFDI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 VSW HYA+V AEE G+T+ N+ ++ K +TNPDVQRFLG++ S IG LGLT +W I+ Sbjct: 241 VSWVHYALVQAEEFGVTRANLEEMKK-STNPDVQRFLGVEADSKIGTDLGLTNEWAVNIV 299 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+FDRN+G S LKI RG NALW+KGGL YAPP+R Sbjct: 300 KAVGNYGEVFDRNIGAGSPLKIERGLNALWNKGGLQYAPPVR 341 >gi|241204488|ref|YP_002975584.1| cationic amino acid ABC transporter periplasmic-binding protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858378|gb|ACS56045.1| cationic amino acid ABC transporter, periplasmic binding protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 341 Score = 435 bits (1119), Expect = e-120, Method: Compositional matrix adjust. Identities = 191/342 (55%), Positives = 261/342 (76%), Gaps = 1/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + +L + + +A+ L D+K +GF++CG+NTGL GFA A+G+W GFD Sbjct: 1 MKNKLLSAAIGAAVLAVGASAASATTLSDVKAKGFVQCGVNTGLTGFAAPDASGNWAGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDFC+A++SA+F DP+K++Y P NAKERF ALQS +ID+LSRNT WT+ R+ +LG FRP Sbjct: 61 VDFCKAVASAVFGDPTKVKYTPTNAKERFTALQSGEIDVLSRNTTWTINRDTALGFNFRP 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DGQGF++ K + S +LSGA+ICVQ+GTTTEL LADYFK +N++Y+P+VFE + Sbjct: 121 VTYYDGQGFMVRKGLNVKSALELSGAAICVQSGTTTELNLADYFKTNNLQYNPVVFENLP 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E++AAY A RCD YT D S LY+L+LT P EHVILP+IISK PL PA+ QGD +W++I Sbjct: 181 EVNAAYDAGRCDVYTTDQSGLYSLRLTLKNPDEHVILPEIISKEPLGPAVRQGDDQWFDI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 VSWT YA++ AEE GITQ N++++ K++ NPD++RFLG + + IG LGLT DW +I Sbjct: 241 VSWTAYALINAEEFGITQANVDEM-KNSPNPDIKRFLGSETDTKIGTDLGLTNDWAANVI 299 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F+RN+G S LKI RG NALW+KGG+ YAPP+R Sbjct: 300 KGVGNYGEIFERNIGQGSPLKIARGLNALWNKGGIQYAPPVR 341 >gi|116251960|ref|YP_767798.1| general L-amino acid substrate binding protein [Rhizobium leguminosarum bv. viciae 3841] gi|3182887|sp|Q52812|AAPJ_RHIL3 RecName: Full=General L-amino acid-binding periplasmic protein AapJ; Flags: Precursor gi|1154894|emb|CAA57933.1| general amino acid ABC type transporter [Rhizobium leguminosarum] gi|115256608|emb|CAK07696.1| General L-amino acid substrate binding protein [Rhizobium leguminosarum bv. viciae 3841] Length = 341 Score = 434 bits (1116), Expect = e-120, Method: Compositional matrix adjust. Identities = 190/342 (55%), Positives = 261/342 (76%), Gaps = 1/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + +L + + +A+ L D+K +GF++CG+NTGL GFA A+G+W GFD Sbjct: 1 MKNKLLSAAIGAAVLAVGASAASATTLSDVKAKGFVQCGVNTGLTGFAAPDASGNWAGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDFC+A++SA+F DP+K++Y P NAKERF ALQS +ID+LSRNT WT+ R+ +LG FRP Sbjct: 61 VDFCKAVASAVFGDPTKVKYTPTNAKERFTALQSGEIDVLSRNTTWTINRDTALGFNFRP 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DGQGF++ K + S +LSGA+ICVQ+GTTTEL LADYFK +N++Y+P+VFE + Sbjct: 121 VTYYDGQGFMVRKGLNVKSALELSGAAICVQSGTTTELNLADYFKTNNLQYNPVVFENLP 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E++AAY A RCD YT D S LY+L+LT P EH+ILP+IISK PL PA+ QGD +W++I Sbjct: 181 EVNAAYDAGRCDVYTTDQSGLYSLRLTLKNPDEHIILPEIISKEPLGPAVRQGDDQWFDI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 VSWT YA++ AEE GITQ N++++ K++ NPD++RFLG + + IG LGLT DW +I Sbjct: 241 VSWTAYALINAEEFGITQANVDEM-KNSPNPDIKRFLGSETDTKIGTDLGLTNDWAANVI 299 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F+RN+G S LKI RG NALW+KGG+ YAPP+R Sbjct: 300 KGVGNYGEIFERNIGQGSPLKIARGLNALWNKGGIQYAPPVR 341 >gi|86357519|ref|YP_469411.1| general L-amino acid ABC transporter, substrate-binding protein [Rhizobium etli CFN 42] gi|86281621|gb|ABC90684.1| general L-amino acid ABC transporter, substrate-binding protein [Rhizobium etli CFN 42] Length = 348 Score = 432 bits (1111), Expect = e-119, Method: Compositional matrix adjust. Identities = 187/342 (54%), Positives = 263/342 (76%), Gaps = 1/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + + + + +A+ LGD+K +GF++CG+NTGL GFA A+G+W GFD Sbjct: 8 MKNKLLSAAIGAAVFALGASAASATTLGDVKAKGFIQCGVNTGLAGFAAPDASGNWAGFD 67 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDFC+A++SA+F DP+K+++ PL+A RF ALQS +ID+L+RNT W++ R+ +LGL FR Sbjct: 68 VDFCKAVASAVFGDPTKVKFTPLSAANRFPALQSGEIDVLARNTTWSINRDTALGLNFRF 127 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K + S +LSGAS+CVQ+GTTTEL LADYFKA+N++Y+P+VFE+++ Sbjct: 128 VNYYDGQGFMVRKSLNVKSALELSGASVCVQSGTTTELNLADYFKANNLQYNPVVFEKLD 187 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E++AAY A RCD YT D S LY+L+LT P EH ILP+IISK PLAPA+ QGD +W++I Sbjct: 188 EVNAAYDAGRCDVYTTDQSGLYSLRLTLKNPDEHAILPEIISKEPLAPAVRQGDDQWFDI 247 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 VSW YAM+ AEE GITQ N++ + K++ NPD++RFLG++ + IG LGLT +W Y I+ Sbjct: 248 VSWVGYAMINAEEFGITQANVDDM-KNSPNPDIKRFLGVEADTKIGTDLGLTNEWAYNIV 306 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +++GNYGE+F+RN+G S LKI RG NALWSKGG+ YAPP+R Sbjct: 307 KNVGNYGEVFERNIGQGSPLKIARGLNALWSKGGIQYAPPVR 348 >gi|327190790|gb|EGE57858.1| general L-amino acid ABC transporter, substrate-binding protein [Rhizobium etli CNPAF512] Length = 341 Score = 432 bits (1110), Expect = e-119, Method: Compositional matrix adjust. Identities = 188/342 (54%), Positives = 264/342 (77%), Gaps = 1/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + +L + + +A+ LGD+K +GF++CG+NTGL GFA A+G+W GFD Sbjct: 1 MKNKLLSAAIGAAVLALGAPAASATTLGDVKAKGFVQCGVNTGLAGFAAPDASGNWAGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDFC+A++SA+F DP+K+++ PL+A RF ALQS +ID+L+RNT W++ R+ +LGL FR Sbjct: 61 VDFCKAVASAVFGDPTKVKFTPLSAANRFPALQSGEIDVLARNTTWSINRDTALGLNFRF 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K + S +LSGAS+CVQ+GTTTEL LADYFKA+N++Y+P+VFE+++ Sbjct: 121 VNYYDGQGFMVRKSLNVKSALELSGASVCVQSGTTTELNLADYFKANNLQYNPVVFEKLD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E++AAY A RCD YT D S LY+L+LT P EH ILP+IISK PLAPA+ QGD +W++I Sbjct: 181 EVNAAYDAGRCDVYTTDQSGLYSLRLTLKNPDEHAILPEIISKEPLAPAVRQGDDQWFDI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 VSW YAM+ AEE GITQ N++ + K++ NPD++RFLG++ + IG LGLT +W Y II Sbjct: 241 VSWVGYAMINAEEFGITQANVDDM-KNSPNPDIKRFLGVEADTKIGTDLGLTNEWAYNII 299 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +++GNYGE+F+RN+G S LKI RG NALW+KGG+ YAPP+R Sbjct: 300 KNVGNYGEVFERNIGQGSPLKIARGLNALWNKGGIQYAPPVR 341 >gi|190891587|ref|YP_001978129.1| general L-amino acid ABC transporter, substrate-binding protein [Rhizobium etli CIAT 652] gi|190696866|gb|ACE90951.1| general L-amino acid ABC transporter, substrate-binding protein [Rhizobium etli CIAT 652] Length = 341 Score = 431 bits (1109), Expect = e-119, Method: Compositional matrix adjust. Identities = 187/342 (54%), Positives = 264/342 (77%), Gaps = 1/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + +L + + +A+ LGD+K +GF++CG+NTGL GFA A+G+W GFD Sbjct: 1 MKNKLLSAAIGAAVLALGAPAASATTLGDVKAKGFVQCGVNTGLAGFAAPDASGNWAGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDFC+A++SA+F DP+K+++ PL+A RF ALQS +ID+L+RNT W++ R+ +LGL FR Sbjct: 61 VDFCKAVASAVFGDPTKVKFTPLSAANRFPALQSGEIDVLARNTTWSINRDTALGLNFRF 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K + S +LSGAS+CVQ+GTTTEL LADYFKA+N++Y+P+VFE+++ Sbjct: 121 VNYYDGQGFMVRKSLNVKSALELSGASVCVQSGTTTELNLADYFKANNLQYNPVVFEKLD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E++AAY A RCD YT D S LY+L+LT P EH ILP+IISK PLAPA+ QGD +W++I Sbjct: 181 EVNAAYDAGRCDVYTTDQSGLYSLRLTLKNPDEHAILPEIISKEPLAPAVRQGDDQWFDI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 VSW YAM+ AEE GITQ N++ + K++ NPD++RFLG++ + IG LGLT +W Y I+ Sbjct: 241 VSWVGYAMINAEEFGITQANVDDM-KNSPNPDIKRFLGVEADTKIGTDLGLTNEWAYNIV 299 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +++GNYGE+F+RN+G S LKI RG NALW+KGG+ YAPP+R Sbjct: 300 KNVGNYGEVFERNIGQGSPLKIARGLNALWNKGGIQYAPPVR 341 >gi|227821880|ref|YP_002825850.1| hypothetical protein NGR_c13170 [Sinorhizobium fredii NGR234] gi|227340879|gb|ACP25097.1| hypothetical protein NGR_c13170 [Sinorhizobium fredii NGR234] Length = 341 Score = 428 bits (1101), Expect = e-118, Method: Compositional matrix adjust. Identities = 182/342 (53%), Positives = 261/342 (76%), Gaps = 1/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + ++ ++ + + +A+ L D+K +GF++CG+NTGL GFA A+G+W GFD Sbjct: 1 MARRILTALFGAAVMGIGAQAASAATLDDVKAKGFVQCGVNTGLAGFAAPDASGNWSGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+C+A+++A+F D +K++Y P +AKERF ALQS ++D+L+RNT WT+ R+ +LG FRP Sbjct: 61 VDYCKAIAAAVFGDATKVKYTPTSAKERFPALQSGEVDVLARNTTWTINRDTALGFNFRP 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K + S +LSGA++CVQ GTTTEL LADYFK +N++Y+P+VFE++E Sbjct: 121 VNYYDGQGFMVRKSLNVKSALELSGAAVCVQTGTTTELNLADYFKTNNLQYNPVVFEKLE 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E++AAY A RCD YT D S LY+L+LT +P +H+ILP+IISK PL PA+ QGD +W++I Sbjct: 181 EVNAAYDAGRCDVYTTDQSGLYSLRLTLSKPDDHMILPEIISKEPLGPAVRQGDDQWFDI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V+W HYA++ AEE G+TQ N+ ++ K + NPDVQRFLG++ S IG LGLT +W +I Sbjct: 241 VTWVHYALIQAEEFGVTQANVEEMKK-SPNPDVQRFLGVEADSKIGTDLGLTNEWAVNVI 299 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+FDRN+G S LKI RG NALW+KGG+ YAPP+R Sbjct: 300 KAVGNYGEVFDRNIGAGSPLKIERGLNALWNKGGIQYAPPVR 341 >gi|222085840|ref|YP_002544371.1| general L-amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221723288|gb|ACM26444.1| general L-amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 344 Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust. Identities = 183/342 (53%), Positives = 267/342 (78%), Gaps = 1/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L L ++ +AS L D+K +GF++CG+NT L+GF++ A+G++ GFD Sbjct: 4 MKKIALSAFLGAAALAYSVSGASASTLSDVKAKGFVQCGVNTALLGFSQPDASGNYSGFD 63 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD C+A+++A+F D +K++Y L++K+RF ALQS +ID+LSRNT WTL R+ +LGL FRP Sbjct: 64 VDMCKAVAAAVFGDVTKVKYTALSSKDRFTALQSGEIDLLSRNTTWTLNRDTALGLNFRP 123 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DGQGF++ K+ + S +LSGA++CVQ+GTTTEL LADYFK++N++Y+P+VF+++E Sbjct: 124 VTYYDGQGFMVRKELNVKSALELSGAAVCVQSGTTTELNLADYFKSNNLQYNPVVFDKLE 183 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E++AAY + RCD YT D S LY+L+LT P ++V+LP+IISK PL PA+ QGD +W++I Sbjct: 184 EVNAAYDSGRCDVYTTDQSGLYSLRLTLKNPDDNVVLPEIISKEPLGPAVRQGDDQWFDI 243 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V+WT YA++ AEE GITQKN++++ K + NPD++RFLG ++ S +G +GLT DW Y +I Sbjct: 244 VTWTAYALINAEEFGITQKNVDEM-KSSANPDIKRFLGAEQGSTLGTDMGLTNDWAYNVI 302 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+FDRN+G S LKI RG NALW+KGG+ YAPP+R Sbjct: 303 KGVGNYGEVFDRNIGAGSPLKIARGLNALWNKGGIQYAPPVR 344 >gi|13476741|ref|NP_108310.1| ABC transporter, amino acid binding protein [Mesorhizobium loti MAFF303099] gi|14027502|dbj|BAB53771.1| ABC transporter, amino acid binding protein [Mesorhizobium loti MAFF303099] Length = 342 Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust. Identities = 185/342 (54%), Positives = 263/342 (76%), Gaps = 3/342 (0%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K + IL L F + + +A+ L +K +GF++CG++TGL GF+ GDW+G D D Sbjct: 2 KHIAIGILGAATLGFMASAASATTLDTVKAKGFIQCGVSTGLAGFSAPDDKGDWQGIDAD 61 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 FCRA+++A+F D +K+++ PL+AKERF ALQS ++DILSRNT WT+ R+ +LGL F T Sbjct: 62 FCRAVAAAVFGDGTKVKFTPLSAKERFTALQSGEVDILSRNTTWTINRDTALGLNFVGTT 121 Query: 123 YFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+DGQGF+++ KK G++S QLSGA++CVQ+GTTTEL LADYFKA+ M+Y+P+VFE++E Sbjct: 122 YYDGQGFMINAKKLPGVNSALQLSGAAVCVQSGTTTELNLADYFKANKMEYNPVVFEKLE 181 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E++AAY A RCD YT D S LY ++LT P++HV+LP+IISK PL PA+ QGD +WY+I Sbjct: 182 EVNAAYDAGRCDVYTTDQSGLYGIRLTLGSPADHVVLPEIISKEPLGPAVRQGDDQWYHI 241 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT++A++ AEELGIT+ N++++ K++ +P+++R LG + + IG LG++ DW I+ Sbjct: 242 VKWTYFALLDAEELGITKANVDEM-KNSASPEIKRVLGQEADTKIGADLGVSNDWVVNIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGEMFDRN+G+ S LKI RG NALW+KGGL YAPPIR Sbjct: 301 KAVGNYGEMFDRNVGSGSPLKIARGINALWTKGGLQYAPPIR 342 >gi|153009884|ref|YP_001371099.1| cationic amino acid ABC transporter periplasmic-binding protein [Ochrobactrum anthropi ATCC 49188] gi|151561772|gb|ABS15270.1| cationic amino acid ABC transporter, periplasmic binding protein [Ochrobactrum anthropi ATCC 49188] Length = 343 Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust. Identities = 187/344 (54%), Positives = 253/344 (73%), Gaps = 3/344 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L LF + +A L D+K +GFL+CG+NTGL+GFA G+W GFD Sbjct: 1 MKKTLMTGVLGAAALFSVASGASADTLSDVKAKGFLQCGVNTGLLGFASPNDKGEWSGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+CRA++SAIF DP+K+++ PLNAKERF ALQS ++D+L RNT WT+ R+ +LGL F Sbjct: 61 VDYCRAVASAIFGDPTKVKFTPLNAKERFTALQSGEVDVLIRNTTWTISRDTALGLDFAG 120 Query: 121 ITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I YFDGQGF+++ KK GI+S QLSGASICVQAGTTTEL +ADYF+A+ M+Y+P+VFE+ Sbjct: 121 INYFDGQGFMINSKKLSGINSALQLSGASICVQAGTTTELNMADYFRANKMEYNPVVFEK 180 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +EE +AAY + RCDAYT D S+LY ++L P +HVILP+IISK P + QGD++W Sbjct: 181 IEEANAAYDSGRCDAYTTDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDSKWA 240 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298 ++V WTH A++ AEE GITQ N+ ++ K + NPD++R LG++ + IG LGL DW + Sbjct: 241 DVVRWTHNALLNAEEYGITQANVEEMKK-SDNPDIKRLLGVEADTKIGTDLGLDNDWVVK 299 Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I++ +GNYGE+F+RN+G S LKI RG NA W+KGGL Y P+R Sbjct: 300 IVKGVGNYGEIFERNIGASSPLKIARGINAQWNKGGLQYGVPVR 343 >gi|319784340|ref|YP_004143816.1| cationic amino acid ABC transporter periplasmic binding protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170228|gb|ADV13766.1| cationic amino acid ABC transporter, periplasmic binding protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 342 Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust. Identities = 184/342 (53%), Positives = 263/342 (76%), Gaps = 3/342 (0%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K + IL L + + +A+ L +K +GF++CG++TGL GF+ GDW+G D D Sbjct: 2 KHIAIGILGAATLGLMASAASAATLDTVKAKGFIQCGVSTGLAGFSAPDDKGDWQGIDAD 61 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 FCRA+++A+F D S++++ PL+AKERF ALQS +IDILSRNT WT+ R+ +LGL F +T Sbjct: 62 FCRAVAAAVFGDGSRVKFTPLSAKERFTALQSGEIDILSRNTTWTINRDTALGLNFIGVT 121 Query: 123 YFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+DGQGF+++ KK G++S QLSGA++CVQ+GTTTEL LADYFKA+ M+Y+P+VFE++E Sbjct: 122 YYDGQGFMINAKKLPGVNSALQLSGAAVCVQSGTTTELNLADYFKANKMEYNPVVFEKLE 181 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E++AAY A RCD YT D S LY ++LT P++HV+LP+IISK PL PA+ QGD +WY+I Sbjct: 182 EVNAAYDAGRCDVYTTDQSGLYGIRLTLGSPADHVVLPEIISKEPLGPAVRQGDDQWYHI 241 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT++A++ AEELGIT+ N++++ K++ +P+++R LG + + IG LG++ DW I+ Sbjct: 242 VKWTYFALLQAEELGITKANVDEM-KNSASPEIKRVLGQEADTKIGTDLGVSNDWVVNIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGEMF+RN+G+ S LKI RG NALW+KGGL YAPPIR Sbjct: 301 KAVGNYGEMFERNVGSGSPLKIARGINALWTKGGLQYAPPIR 342 >gi|260463341|ref|ZP_05811542.1| cationic amino acid ABC transporter, periplasmic binding protein [Mesorhizobium opportunistum WSM2075] gi|259030931|gb|EEW32206.1| cationic amino acid ABC transporter, periplasmic binding protein [Mesorhizobium opportunistum WSM2075] Length = 430 Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust. Identities = 184/344 (53%), Positives = 264/344 (76%), Gaps = 3/344 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + K + IL L + + +A+ L +K +GF++CG++TGL GF+ GDW+G D Sbjct: 88 VMKHIAIGILGAAALGLMASAASATTLDTVKAKGFIQCGVSTGLAGFSAPDDKGDWQGID 147 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 DFCRA+++A+F D +K+++ PL+AKERF ALQS ++DILSRNT WT+ R+ +LGL F Sbjct: 148 ADFCRAVAAAVFGDGTKVKFTPLSAKERFTALQSGEVDILSRNTTWTINRDTALGLNFIG 207 Query: 121 ITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 +TY+DGQGF+++ KK G++S QLSGA++CVQ+GTTTEL LADYFKA+ M+Y+P+VFE+ Sbjct: 208 VTYYDGQGFMINAKKLPGVNSALQLSGAAVCVQSGTTTELNLADYFKANKMEYNPVVFEK 267 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +EE++AAY A RCD YT D S LY ++LT P++HV+LP+IISK PL PA+ QGD +WY Sbjct: 268 LEEVNAAYDAGRCDVYTTDQSGLYGIRLTLGSPADHVVLPEIISKEPLGPAVRQGDDQWY 327 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298 +IV WT++A++ AEELGIT+ N++++ K++ +P+++R LG + + IG LG++ DW Sbjct: 328 HIVKWTYFALLDAEELGITKANVDEM-KNSASPEIKRVLGQEADTKIGTDLGVSNDWVVN 386 Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I++ +GNYGEMFDRN+G+ S LKI RG NALW+KGGL YAPPIR Sbjct: 387 IVKAVGNYGEMFDRNVGSGSPLKIARGINALWTKGGLQYAPPIR 430 >gi|254709861|ref|ZP_05171672.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella pinnipedialis B2/94] gi|256031353|ref|ZP_05444967.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella pinnipedialis M292/94/1] gi|261317400|ref|ZP_05956597.1| cationic amino acid ABC transporter [Brucella pinnipedialis B2/94] gi|265988437|ref|ZP_06100994.1| cationic amino acid ABC transporter [Brucella pinnipedialis M292/94/1] gi|261296623|gb|EEY00120.1| cationic amino acid ABC transporter [Brucella pinnipedialis B2/94] gi|264660634|gb|EEZ30895.1| cationic amino acid ABC transporter [Brucella pinnipedialis M292/94/1] Length = 343 Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust. Identities = 189/344 (54%), Positives = 252/344 (73%), Gaps = 3/344 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L LF + +A L D+K +GFL+CG+NTGL+GFA G+W GFD Sbjct: 1 MKKTLMTGVLGAAALFGIASGASADTLSDVKAKGFLQCGVNTGLLGFASPNNKGEWSGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+CRA++SAIF DP+K+++ PLNAKERF ALQS ++D+L RNT WT+ R+ SLGL F Sbjct: 61 VDYCRAVASAIFGDPTKVKFTPLNAKERFTALQSGEVDVLIRNTTWTISRDTSLGLDFAG 120 Query: 121 ITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I Y+DGQGF+++ KK GI+S QLSGASICVQAGTTTEL +ADYF+A+ M+Y+P+VFE+ Sbjct: 121 INYYDGQGFMINSKKLAGINSALQLSGASICVQAGTTTELNMADYFRANKMEYNPVVFEK 180 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +EE +AAY + RCDAYT D S+LY ++L P +HVILP+IISK P + QGD W Sbjct: 181 IEEANAAYDSGRCDAYTTDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDARWA 240 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298 ++V WTH A++ AEE GITQ N+ ++ K + NPD++R LG + + IG LGL KDW + Sbjct: 241 DVVRWTHNALLNAEEYGITQANVEEMKK-SDNPDIKRLLGAEADTKIGTDLGLDKDWVVK 299 Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 II+ +GNYGE+F+RN+G+ S LKI RG NA W+KGGL Y P+R Sbjct: 300 IIKGVGNYGEIFERNIGSGSPLKIARGLNAQWNKGGLQYGIPVR 343 >gi|23501628|ref|NP_697755.1| amino acid ABC transporter periplasmic amino acid-binding protein [Brucella suis 1330] gi|148560716|ref|YP_001258723.1| amino acid ABC transporter periplasmic amino acid-binding protein [Brucella ovis ATCC 25840] gi|161618711|ref|YP_001592598.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella canis ATCC 23365] gi|163843013|ref|YP_001627417.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella suis ATCC 23445] gi|225627243|ref|ZP_03785280.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella ceti str. Cudo] gi|254704068|ref|ZP_05165896.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella suis bv. 3 str. 686] gi|254718861|ref|ZP_05180672.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella sp. 83/13] gi|256060862|ref|ZP_05451022.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella neotomae 5K33] gi|256369174|ref|YP_003106682.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella microti CCM 4915] gi|260168486|ref|ZP_05755297.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella sp. F5/99] gi|260566684|ref|ZP_05837154.1| cationic amino acid ABC transporter [Brucella suis bv. 4 str. 40] gi|261324858|ref|ZP_05964055.1| cationic amino acid ABC transporter [Brucella neotomae 5K33] gi|261754726|ref|ZP_05998435.1| cationic amino acid ABC transporter [Brucella suis bv. 3 str. 686] gi|261757954|ref|ZP_06001663.1| cationic amino acid ABC transporter [Brucella sp. F5/99] gi|265983846|ref|ZP_06096581.1| cationic amino acid ABC transporter [Brucella sp. 83/13] gi|306837636|ref|ZP_07470506.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella sp. NF 2653] gi|306842009|ref|ZP_07474682.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella sp. BO2] gi|306843688|ref|ZP_07476288.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella sp. BO1] gi|23347545|gb|AAN29670.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella suis 1330] gi|148371973|gb|ABQ61952.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella ovis ATCC 25840] gi|161335522|gb|ABX61827.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella canis ATCC 23365] gi|163673736|gb|ABY37847.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella suis ATCC 23445] gi|225617248|gb|EEH14293.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella ceti str. Cudo] gi|255999334|gb|ACU47733.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella microti CCM 4915] gi|260156202|gb|EEW91282.1| cationic amino acid ABC transporter [Brucella suis bv. 4 str. 40] gi|261300838|gb|EEY04335.1| cationic amino acid ABC transporter [Brucella neotomae 5K33] gi|261737938|gb|EEY25934.1| cationic amino acid ABC transporter [Brucella sp. F5/99] gi|261744479|gb|EEY32405.1| cationic amino acid ABC transporter [Brucella suis bv. 3 str. 686] gi|264662438|gb|EEZ32699.1| cationic amino acid ABC transporter [Brucella sp. 83/13] gi|306275998|gb|EFM57707.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella sp. BO1] gi|306287850|gb|EFM59270.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella sp. BO2] gi|306407285|gb|EFM63494.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella sp. NF 2653] Length = 343 Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust. Identities = 189/344 (54%), Positives = 252/344 (73%), Gaps = 3/344 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L LF + +A L D+K +GFL+CG+NTGL+GFA G+W GFD Sbjct: 1 MKKTLMTGVLGAAALFGIASGASADTLSDVKAKGFLQCGVNTGLLGFASPNDKGEWSGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+CRA++SAIF DP+K+++ PLNAKERF ALQS ++D+L RNT WT+ R+ SLGL F Sbjct: 61 VDYCRAVASAIFGDPTKVKFTPLNAKERFTALQSGEVDVLIRNTTWTISRDTSLGLDFAG 120 Query: 121 ITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I Y+DGQGF+++ KK GI+S QLSGASICVQAGTTTEL +ADYF+A+ M+Y+P+VFE+ Sbjct: 121 INYYDGQGFMINSKKLAGINSALQLSGASICVQAGTTTELNMADYFRANKMEYNPVVFEK 180 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +EE +AAY + RCDAYT D S+LY ++L P +HVILP+IISK P + QGD W Sbjct: 181 IEEANAAYDSGRCDAYTTDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDARWA 240 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298 ++V WTH A++ AEE GITQ N+ ++ K + NPD++R LG + + IG LGL KDW + Sbjct: 241 DVVRWTHNALLNAEEYGITQANVEEMKK-SDNPDIKRLLGAEADTKIGTDLGLDKDWVVK 299 Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 II+ +GNYGE+F+RN+G+ S LKI RG NA W+KGGL Y P+R Sbjct: 300 IIKGVGNYGEIFERNIGSGSPLKIARGLNAQWNKGGLQYGIPVR 343 >gi|239831564|ref|ZP_04679893.1| lysine-arginine-ornithine-binding periplasmic protein [Ochrobactrum intermedium LMG 3301] gi|239823831|gb|EEQ95399.1| lysine-arginine-ornithine-binding periplasmic protein [Ochrobactrum intermedium LMG 3301] Length = 360 Score = 411 bits (1057), Expect = e-113, Method: Compositional matrix adjust. Identities = 186/344 (54%), Positives = 253/344 (73%), Gaps = 3/344 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L LF + +A L D+K +GFL+CG+NTGL+GF+ G+W GFD Sbjct: 18 MKKTLMTGVLGAAALFCVASGASADTLSDVKAKGFLQCGVNTGLLGFSSPNDKGEWSGFD 77 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+CRA++SAIF DP+K+++ PLNAKERF ALQS +ID+L RNT WT+ R+ +LGL F Sbjct: 78 VDYCRAVASAIFGDPAKVKFTPLNAKERFTALQSGEIDVLIRNTTWTISRDTALGLDFAG 137 Query: 121 ITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I YFDGQGF+++ KK GI+S QLSGASICVQAGTTTE+ +ADYF+A+ M+Y+P+VFE+ Sbjct: 138 INYFDGQGFMINSKKLSGINSALQLSGASICVQAGTTTEMNMADYFRANKMEYNPVVFEK 197 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +EE +AAY + RCDAYT D S+LY ++L P +HVILP+IISK P + QGD++W Sbjct: 198 IEEANAAYDSGRCDAYTTDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDSKWT 257 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298 ++V W H A++ AEE GITQ N+ ++ K + NPD++R LG++ + IG LGL DW + Sbjct: 258 DVVRWVHNALLNAEEYGITQANVEEMKK-SDNPDIKRLLGVEADTKIGTDLGLENDWVVK 316 Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 II+ +GNYGE+F+RN+G+ S LKI RG NA W+KGGL Y P+R Sbjct: 317 IIKGVGNYGEIFERNIGSGSPLKIARGINAQWNKGGLQYGIPVR 360 >gi|17987494|ref|NP_540128.1| general L-amino acid-binding periplasmic protein AAPJ precursor [Brucella melitensis bv. 1 str. 16M] gi|254689006|ref|ZP_05152260.1| general L-amino acid-binding periplasmic protein AAPJ precursor [Brucella abortus bv. 6 str. 870] gi|254693490|ref|ZP_05155318.1| general L-amino acid-binding periplasmic protein AAPJ precursor [Brucella abortus bv. 3 str. Tulya] gi|256044431|ref|ZP_05447335.1| general L-amino acid-binding periplasmic protein AAPJ precursor [Brucella melitensis bv. 1 str. Rev.1] gi|256113275|ref|ZP_05454143.1| general L-amino acid-binding periplasmic protein AAPJ precursor [Brucella melitensis bv. 3 str. Ether] gi|256257256|ref|ZP_05462792.1| general L-amino acid-binding periplasmic protein AAPJ precursor [Brucella abortus bv. 9 str. C68] gi|260563783|ref|ZP_05834269.1| cationic amino acid ABC transporter [Brucella melitensis bv. 1 str. 16M] gi|260754500|ref|ZP_05866848.1| cationic amino acid ABC transporter [Brucella abortus bv. 6 str. 870] gi|260883528|ref|ZP_05895142.1| cationic amino acid ABC transporter [Brucella abortus bv. 9 str. C68] gi|261213748|ref|ZP_05928029.1| cationic amino acid ABC transporter [Brucella abortus bv. 3 str. Tulya] gi|265990852|ref|ZP_06103409.1| cationic amino acid ABC transporter [Brucella melitensis bv. 1 str. Rev.1] gi|265994687|ref|ZP_06107244.1| cationic amino acid ABC transporter [Brucella melitensis bv. 3 str. Ether] gi|297248104|ref|ZP_06931822.1| general L-amino acid transport system substrate-binding protein [Brucella abortus bv. 5 str. B3196] gi|17983192|gb|AAL52392.1| general l-amino acid-binding periplasmic protein aapj precursor [Brucella melitensis bv. 1 str. 16M] gi|260153799|gb|EEW88891.1| cationic amino acid ABC transporter [Brucella melitensis bv. 1 str. 16M] gi|260674608|gb|EEX61429.1| cationic amino acid ABC transporter [Brucella abortus bv. 6 str. 870] gi|260873056|gb|EEX80125.1| cationic amino acid ABC transporter [Brucella abortus bv. 9 str. C68] gi|260915355|gb|EEX82216.1| cationic amino acid ABC transporter [Brucella abortus bv. 3 str. Tulya] gi|262765800|gb|EEZ11589.1| cationic amino acid ABC transporter [Brucella melitensis bv. 3 str. Ether] gi|263001636|gb|EEZ14211.1| cationic amino acid ABC transporter [Brucella melitensis bv. 1 str. Rev.1] gi|297175273|gb|EFH34620.1| general L-amino acid transport system substrate-binding protein [Brucella abortus bv. 5 str. B3196] Length = 343 Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust. Identities = 188/344 (54%), Positives = 251/344 (72%), Gaps = 3/344 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L LF + +A L D+K +GFL+CG+NTGL+GFA G+W GFD Sbjct: 1 MKKTLMTGVLGAAALFGIASGASADTLSDVKAKGFLQCGVNTGLLGFASPNDKGEWSGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+CRA++SAIF DP+K+++ PLNAKERF A QS ++D+L RNT WT+ R+ SLGL F Sbjct: 61 VDYCRAVASAIFGDPTKVKFTPLNAKERFTAFQSGEVDVLIRNTTWTISRDTSLGLDFAG 120 Query: 121 ITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I Y+DGQGF+++ KK GI+S QLSGASICVQAGTTTEL +ADYF+A+ M+Y+P+VFE+ Sbjct: 121 INYYDGQGFMINSKKLAGINSALQLSGASICVQAGTTTELNMADYFRANKMEYNPVVFEK 180 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +EE +AAY + RCDAYT D S+LY ++L P +HVILP+IISK P + QGD W Sbjct: 181 IEEANAAYDSGRCDAYTTDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDARWA 240 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298 ++V WTH A++ AEE GITQ N+ ++ K + NPD++R LG + + IG LGL KDW + Sbjct: 241 DVVRWTHNALLNAEEYGITQANVEEMKK-SDNPDIKRLLGAEADTKIGTDLGLDKDWVVK 299 Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 II+ +GNYGE+F+RN+G+ S LKI RG NA W+KGGL Y P+R Sbjct: 300 IIKGVGNYGEIFERNIGSGSPLKIARGLNAQWNKGGLQYGIPVR 343 >gi|254713861|ref|ZP_05175672.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella ceti M644/93/1] gi|254717082|ref|ZP_05178893.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella ceti M13/05/1] gi|261218893|ref|ZP_05933174.1| cationic amino acid ABC transporter [Brucella ceti M13/05/1] gi|261321608|ref|ZP_05960805.1| cationic amino acid ABC transporter [Brucella ceti M644/93/1] gi|260923982|gb|EEX90550.1| cationic amino acid ABC transporter [Brucella ceti M13/05/1] gi|261294298|gb|EEX97794.1| cationic amino acid ABC transporter [Brucella ceti M644/93/1] Length = 343 Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust. Identities = 188/344 (54%), Positives = 251/344 (72%), Gaps = 3/344 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L LF + +A L D+K +GFL+CG+NTGL+GFA G+W GFD Sbjct: 1 MKKTLMTGVLGAAALFGIASGASADTLSDVKAKGFLQCGVNTGLLGFASPNDKGEWSGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+CRA++SAIF DP+K+++ PLNAKERF ALQS ++D+L RNT WT+ R+ SLGL F Sbjct: 61 VDYCRAVASAIFGDPTKVKFTPLNAKERFTALQSGEVDVLIRNTTWTISRDTSLGLDFAG 120 Query: 121 ITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I Y+DGQGF+++ KK GI+S QLSGASICVQ GTTTEL +ADYF+A+ M+Y+P+VFE+ Sbjct: 121 INYYDGQGFMINSKKLAGINSALQLSGASICVQVGTTTELNMADYFRANKMEYNPVVFEK 180 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +EE +AAY + RCDAYT D S+LY ++L P +HVILP+IISK P + QGD W Sbjct: 181 IEEANAAYDSGRCDAYTTDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDARWA 240 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298 ++V WTH A++ AEE GITQ N+ ++ K + NPD++R LG + + IG LGL KDW + Sbjct: 241 DVVRWTHNALLNAEEYGITQANVEEMKK-SDNPDIKRLLGAEADTKIGTDLGLDKDWVVK 299 Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 II+ +GNYGE+F+RN+G+ S LKI RG NA W+KGGL Y P+R Sbjct: 300 IIKGVGNYGEIFERNIGSGSPLKIARGLNAEWNKGGLQYGIPVR 343 >gi|225852259|ref|YP_002732492.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella melitensis ATCC 23457] gi|256264234|ref|ZP_05466766.1| cationic amino acid ABC transporter [Brucella melitensis bv. 2 str. 63/9] gi|225640624|gb|ACO00538.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella melitensis ATCC 23457] gi|263094479|gb|EEZ18301.1| cationic amino acid ABC transporter [Brucella melitensis bv. 2 str. 63/9] Length = 343 Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust. Identities = 188/344 (54%), Positives = 250/344 (72%), Gaps = 3/344 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L LF + +A L D+K +GFL+CG+NTGL+GFA G+W GFD Sbjct: 1 MKKTLMTGVLGAAALFGIASGASADTLSDVKAKGFLQCGVNTGLLGFASPNDKGEWSGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+CRA++SAIF DP+K+++ PLNAKERF A QS ++D+L RNT WT+ R+ SLGL F Sbjct: 61 VDYCRAVASAIFGDPTKVKFTPLNAKERFTAFQSGEVDVLIRNTTWTISRDTSLGLDFAG 120 Query: 121 ITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I Y+DGQGF+++ KK GI+S QLSGASICVQAGTTTEL +ADYF+A+ M+Y+P VFE+ Sbjct: 121 INYYDGQGFMINSKKLAGINSALQLSGASICVQAGTTTELNMADYFRANKMEYNPAVFEK 180 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +EE +AAY + RCDAYT D S+LY ++L P +HVILP+IISK P + QGD W Sbjct: 181 IEEANAAYDSGRCDAYTTDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDARWA 240 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298 ++V WTH A++ AEE GITQ N+ ++ K + NPD++R LG + + IG LGL KDW + Sbjct: 241 DVVRWTHNALLNAEEYGITQANVEEMKK-SDNPDIKRLLGAEADTKIGTDLGLDKDWVVK 299 Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 II+ +GNYGE+F+RN+G+ S LKI RG NA W+KGGL Y P+R Sbjct: 300 IIKGVGNYGEIFERNIGSGSPLKIARGLNAQWNKGGLQYGIPVR 343 >gi|294852106|ref|ZP_06792779.1| general L-amino acid transport system substrate-binding protein [Brucella sp. NVSL 07-0026] gi|294820695|gb|EFG37694.1| general L-amino acid transport system substrate-binding protein [Brucella sp. NVSL 07-0026] Length = 338 Score = 407 bits (1047), Expect = e-112, Method: Compositional matrix adjust. Identities = 186/339 (54%), Positives = 249/339 (73%), Gaps = 3/339 (0%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 +L LF + +A L D+K +GFL+CG+NTGL+GFA G+W GFDVD+CR Sbjct: 1 MTGVLGAAALFGIASGASADTLSDVKAKGFLQCGVNTGLLGFASPNDKGEWSGFDVDYCR 60 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 A++SAIF DP+K+++ PLNAKERF ALQS ++D+L RNT WT+ R+ SLGL F I Y+D Sbjct: 61 AVASAIFGDPTKVKFTPLNAKERFTALQSGEVDVLIRNTTWTISRDTSLGLDFAGINYYD 120 Query: 126 GQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 GQGF+++ KK GI+S QLSGASICVQAGTTTEL +ADYF+A+ M+Y+P+VFE++EE + Sbjct: 121 GQGFMINSKKLAGINSALQLSGASICVQAGTTTELNMADYFRANKMEYNPVVFEKIEEAN 180 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 AAY + RCDAYT D S+LY ++L P +HVILP+IISK P + QGD W ++V W Sbjct: 181 AAYDSGRCDAYTTDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDARWADVVRW 240 Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHM 303 TH A++ AEE GITQ N+ ++ K + NPD++R LG + + IG LGL KDW +II+ + Sbjct: 241 THNALLNAEEYGITQANVEEMKK-SDNPDIKRLLGAEADTKIGTDLGLDKDWVVKIIKGV 299 Query: 304 GNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F+RN+G+ S LKI RG N W+KGGL Y P+R Sbjct: 300 GNYGEIFERNIGSGSPLKIARGLNVQWNKGGLQYGIPVR 338 >gi|256159474|ref|ZP_05457242.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella ceti M490/95/1] gi|256254760|ref|ZP_05460296.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella ceti B1/94] gi|261221938|ref|ZP_05936219.1| cationic amino acid ABC transporter [Brucella ceti B1/94] gi|265997901|ref|ZP_06110458.1| cationic amino acid ABC transporter [Brucella ceti M490/95/1] gi|260920522|gb|EEX87175.1| cationic amino acid ABC transporter [Brucella ceti B1/94] gi|262552369|gb|EEZ08359.1| cationic amino acid ABC transporter [Brucella ceti M490/95/1] Length = 343 Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust. Identities = 187/344 (54%), Positives = 250/344 (72%), Gaps = 3/344 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L LF + +A L D+K +GFL+CG+NTGL+GFA G+W GFD Sbjct: 1 MKKTLMTGVLGAAALFGIASGASADTLSDVKAKGFLQCGVNTGLLGFASPNDKGEWSGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD CRA++SAIF DP+K+++ PLNAKERF ALQS ++D+L RNT WT+ R+ SLGL F Sbjct: 61 VDSCRAVASAIFGDPTKVKFTPLNAKERFTALQSGEVDVLIRNTTWTISRDTSLGLDFAG 120 Query: 121 ITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I Y+DGQGF+++ KK I+S QLSGASICVQAG+TTEL +ADYF+A+ M+Y+P+VFE+ Sbjct: 121 INYYDGQGFMINSKKLADINSALQLSGASICVQAGSTTELNMADYFRANKMEYNPVVFEK 180 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +EE +AAY + RCDAYT D S+LY ++L P +HVILP+IISK P + QGD W Sbjct: 181 IEEANAAYDSGRCDAYTTDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDARWA 240 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298 ++V WTH A++ AEE GITQ N+ ++ K + NPD++R LG + + IG LGL KDW + Sbjct: 241 DVVRWTHNALLNAEEYGITQANVEEMKK-SDNPDIKRLLGAEADTKIGTDLGLDKDWVVK 299 Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 II+ +GNYGE+F+RN+G+ S LKI RG NA W+KGGL Y P+R Sbjct: 300 IIKGVGNYGEIFERNIGSGSPLKIARGLNAQWNKGGLQYGIPVR 343 >gi|326408764|gb|ADZ65829.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella melitensis M28] gi|326538482|gb|ADZ86697.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella melitensis M5-90] Length = 338 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 186/339 (54%), Positives = 248/339 (73%), Gaps = 3/339 (0%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 +L LF + +A L D+K +GFL+CG+NTGL+GFA G+W GFDVD+CR Sbjct: 1 MTGVLGAAALFGIASGASADTLSDVKAKGFLQCGVNTGLLGFASPNDKGEWSGFDVDYCR 60 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 A++SAIF DP+K+++ PLNAKERF A QS ++D+L RNT WT+ R+ SLGL F I Y+D Sbjct: 61 AVASAIFGDPTKVKFTPLNAKERFTAFQSGEVDVLIRNTTWTISRDTSLGLDFAGINYYD 120 Query: 126 GQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 GQGF+++ KK GI+S QLSGASICVQAGTTTEL +ADYF+A+ M+Y+P VFE++EE + Sbjct: 121 GQGFMINSKKLAGINSALQLSGASICVQAGTTTELNMADYFRANKMEYNPAVFEKIEEAN 180 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 AAY + RCDAYT D S+LY ++L P +HVILP+IISK P + QGD W ++V W Sbjct: 181 AAYDSGRCDAYTTDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDARWADVVRW 240 Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHM 303 TH A++ AEE GITQ N+ ++ K + NPD++R LG + + IG LGL KDW +II+ + Sbjct: 241 THNALLNAEEYGITQANVEEMKK-SDNPDIKRLLGAEADTKIGTDLGLDKDWVVKIIKGV 299 Query: 304 GNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F+RN+G+ S LKI RG NA W+KGGL Y P+R Sbjct: 300 GNYGEIFERNIGSGSPLKIARGLNAQWNKGGLQYGIPVR 338 >gi|220926164|ref|YP_002501466.1| family 3 extracellular solute-binding protein [Methylobacterium nodulans ORS 2060] gi|219950771|gb|ACL61163.1| extracellular solute-binding protein family 3 [Methylobacterium nodulans ORS 2060] Length = 337 Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust. Identities = 179/333 (53%), Positives = 240/333 (72%), Gaps = 2/333 (0%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 L L + + + + L IK++GF+ CG N GL GF A G W G DVDFCRAL++ Sbjct: 7 LSLSVCLLSGAAQAQATLASIKQKGFIACGSNPGLAGFGVPDAQGRWTGLDVDFCRALAA 66 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 AIF+D ++++++PL+AK+RF ALQS ++D+LSRNT WT+ R+ SLGL F + ++DGQGF Sbjct: 67 AIFNDTTRVRFIPLSAKDRFTALQSGEVDVLSRNTTWTMSRDTSLGLDFPSVNFYDGQGF 126 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 ++ KK G++S QL GASIC Q GTTTEL LADYF+A+ +KY + F +E AY + Sbjct: 127 MVKKKLGVTSAKQLDGASICTQQGTTTELNLADYFRANKLKYEAVAFATADETFKAYDSG 186 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 RCDA+T D S LYA +L P ++V+LP++ISK PL PA+ GD++W +IV WTH+AM+ Sbjct: 187 RCDAFTTDASGLYAERLRASNPDDNVVLPEVISKEPLGPAVRHGDSQWADIVRWTHFAML 246 Query: 250 TAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEM 309 AEE GITQ N++Q+ K T NPDV+R LG + GE +GLT DW YRII+ +GNYGE+ Sbjct: 247 NAEEAGITQANVDQMLKSTDNPDVKRILGTE--GKFGEGIGLTNDWAYRIIKLVGNYGEV 304 Query: 310 FDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 F+RN+G S+LKI RG NALWSKGGL Y PPIR Sbjct: 305 FERNVGQGSQLKIQRGVNALWSKGGLQYGPPIR 337 >gi|325292970|ref|YP_004278834.1| general L-amino acid-binding periplasmic protein AapJ precursor [Agrobacterium sp. H13-3] gi|325060823|gb|ADY64514.1| general L-amino acid-binding periplasmic protein AapJ precursor [Agrobacterium sp. H13-3] Length = 340 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 172/342 (50%), Positives = 251/342 (73%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ +L S ++ A+ L D+K +GF+ CG++ G+ GF+ G+W G D Sbjct: 1 MKKAILSAVIGAAVLGGASVAS-AATLQDVKSKGFVTCGVSAGIPGFSNPDDKGEWSGID 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+CR +++A+F DP+K +++ L++K+RF ALQS ++D+L+RNT WT+ R+ SLG FR Sbjct: 60 VDYCRGIATAVFGDPTKAKFVALSSKDRFPALQSGEVDVLTRNTTWTISRDTSLGFNFRT 119 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGFI K + S +LSGA++CVQ GTTTEL LADYFK +N++Y+P+VFE+ Sbjct: 120 VNYYDGQGFIAKKGLNVKSALELSGAAVCVQTGTTTELNLADYFKTNNLQYNPVVFEKES 179 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + +AY + RCD YT D S LYA++L P ++++LP++ISK PL PA+ QGD +W++I Sbjct: 180 DATSAYDSGRCDVYTTDQSGLYAIRLKLKNPDDNIVLPEVISKEPLGPAVRQGDDQWFDI 239 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V+W HYAMV AEELGIT KN+++ K++ NPD++R LG ++ + IG LG+T DW Y I+ Sbjct: 240 VTWVHYAMVNAEELGITSKNVDE-QKNSANPDIKRLLGTEEGTKIGTDLGVTNDWAYNIV 298 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+FDRN+G S LKI RG NALW+KGGL YAPP+R Sbjct: 299 KKVGNYGEVFDRNVGAGSPLKIERGQNALWTKGGLQYAPPVR 340 >gi|163760315|ref|ZP_02167398.1| ABC transporter, amino acid binding protein [Hoeflea phototrophica DFL-43] gi|162282714|gb|EDQ33002.1| ABC transporter, amino acid binding protein [Hoeflea phototrophica DFL-43] Length = 340 Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust. Identities = 170/316 (53%), Positives = 238/316 (75%), Gaps = 3/316 (0%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L D+K +GF++CG++TGL GF+ G+W G DVD CR +++A+F D S +++ PL+AK Sbjct: 28 LDDVKAKGFVQCGVSTGLAGFSAPNDAGEWSGIDVDLCRGVAAAVFGDASAVKFSPLSAK 87 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 ERF ALQS +ID+LSRNT WT+ R+ LGL F + Y+DGQGF++ K G++S QLSGA Sbjct: 88 ERFTALQSGEIDVLSRNTTWTMSRDTQLGLNFAGVNYYDGQGFMVRKSLGVTSALQLSGA 147 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 S+CVQ GTTTEL L DYFKA++M Y+P+VFE++EE++AAY A+RCD YT D S LY+++L Sbjct: 148 SVCVQTGTTTELNLTDYFKANDMTYNPVVFEKLEEVNAAYDANRCDVYTTDQSGLYSIRL 207 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 P EH++LP++ISK PL P + QGD +W+NIV W H AM+ AEE+GIT N+++++ Sbjct: 208 GLSAPDEHMVLPEVISKEPLGPVVRQGDDQWFNIVKWVHNAMLNAEEMGITSANVDEMAA 267 Query: 267 DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGY 326 + +P+V R LG K GE +G++ DW Y++++ +GNYGE+F+RN+G + L I RG Sbjct: 268 -SADPNVMRLLG--KEGTFGEGIGVSNDWAYQVVKQVGNYGEVFERNVGASTPLAIDRGV 324 Query: 327 NALWSKGGLMYAPPIR 342 NALWSKGGL YAPPIR Sbjct: 325 NALWSKGGLQYAPPIR 340 >gi|222148880|ref|YP_002549837.1| ABC transporter substrate binding protein (amino acid) [Agrobacterium vitis S4] gi|221735866|gb|ACM36829.1| ABC transporter substrate binding protein (amino acid) [Agrobacterium vitis S4] Length = 341 Score = 391 bits (1005), Expect = e-107, Method: Compositional matrix adjust. Identities = 172/316 (54%), Positives = 234/316 (74%), Gaps = 1/316 (0%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L D+K +GF++CG++ G+ GF+ GDW G DVD+CR +++A+F D SK ++ P++AK Sbjct: 27 LSDVKAKGFVQCGVSQGIPGFSAPNDKGDWSGLDVDYCRGIAAAVFGDASKAKFTPVSAK 86 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 +RF ALQS +ID+L+RNT WT+ R+ SLG FR + Y+DGQGF+ K + S +LSGA Sbjct: 87 DRFPALQSGEIDVLTRNTTWTISRDTSLGFNFRTVNYYDGQGFMAKKSLNVKSALELSGA 146 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 ++CVQ GTTTEL LADYFKA+ +KY+P+VFE+ ++ AAY A RCD YT D S LYA++L Sbjct: 147 AVCVQTGTTTELNLADYFKANGLKYNPVVFEKEDDATAAYDAGRCDVYTTDQSGLYAIRL 206 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 P ++V+LP++ISK PL PA+ QGD +W+++VSW HYAMV AEE G+T KNI+ + K Sbjct: 207 KLKNPDDNVVLPEVISKEPLGPAVRQGDDKWFDVVSWVHYAMVNAEEAGVTSKNIDDL-K 265 Query: 267 DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGY 326 PD++R LG + S +G LGL +DW Y +I+ +GNYGE+FDRN+G S LKI RG Sbjct: 266 ANGGPDIKRMLGAEAGSKLGTDLGLKEDWAYNVIKLVGNYGEVFDRNVGVGSPLKIARGV 325 Query: 327 NALWSKGGLMYAPPIR 342 NALWSKGGL Y PPIR Sbjct: 326 NALWSKGGLQYGPPIR 341 >gi|170743936|ref|YP_001772591.1| cationic amino acid ABC transporter periplasmic binding protein [Methylobacterium sp. 4-46] gi|168198210|gb|ACA20157.1| cationic amino acid ABC transporter, periplasmic binding protein [Methylobacterium sp. 4-46] Length = 340 Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust. Identities = 174/313 (55%), Positives = 232/313 (74%), Gaps = 2/313 (0%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 IK++GF+ CG N GL GF A G W G DVDFCRAL++A+F+D +K++++PL+AK+RF Sbjct: 30 IKQKGFIACGSNPGLAGFGVPDAQGRWTGLDVDFCRALAAAVFNDTTKVRFIPLSAKDRF 89 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 ALQS ++D+LSRNT WT+ R+ +LGL F + ++DGQGF++ KK G++S QL GASIC Sbjct: 90 TALQSGEVDVLSRNTTWTMSRDTALGLDFPAVNFYDGQGFMVKKKLGVTSAKQLDGASIC 149 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 Q GTTTEL LADYF+A+ +KY + F +E AY + RCDA+T D S LYA +L Sbjct: 150 TQQGTTTELNLADYFRANKLKYEVVAFATSDETFKAYDSGRCDAFTTDASGLYAERLRAA 209 Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 P ++++LP++ISK PL PA+ GD++W +IV WTHYAM+ AEE GITQ N++Q+ K T Sbjct: 210 NPDDNIVLPEVISKEPLGPAVRHGDSQWADIVRWTHYAMLNAEEAGITQANVDQMVKATD 269 Query: 270 NPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNAL 329 NPDV+R LG + GE +GL+ DW YRII+ +GNYGE+F+RN+G S LKI RG NAL Sbjct: 270 NPDVKRILGTE--GKFGEGIGLSNDWAYRIIKLVGNYGEVFERNVGQGSPLKIQRGVNAL 327 Query: 330 WSKGGLMYAPPIR 342 WSKGGL Y PPIR Sbjct: 328 WSKGGLQYGPPIR 340 >gi|182678577|ref|YP_001832723.1| cationic amino acid ABC transporter, periplasmic binding protein [Beijerinckia indica subsp. indica ATCC 9039] gi|182634460|gb|ACB95234.1| cationic amino acid ABC transporter, periplasmic binding protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 336 Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust. Identities = 178/319 (55%), Positives = 234/319 (73%), Gaps = 3/319 (0%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 A L ++K RGFL CG N GL GF G W GFD+DFCRA+++AIFDDP+K+++LPL Sbjct: 21 AGTLDEVKGRGFLNCGSNPGLAGFGLPDDKGQWVGFDIDFCRAVAAAIFDDPTKVKFLPL 80 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 + K+RF ALQS +IDILSRNT WT RE+ G F ITY+DGQGF+ H+K ++S +L Sbjct: 81 SGKDRFTALQSGEIDILSRNTTWTQSREVGQGFLFTGITYYDGQGFMTHRKLNLTSALEL 140 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 +GASICVQ GTTTEL LAD+F+A+N++Y P+ F +E AY RCDA T D S LYA Sbjct: 141 AGASICVQQGTTTELNLADFFRANNLQYEPVNFATGDEALKAYDTGRCDALTTDASGLYA 200 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 + P +HV+LP+IISK PL P + QGD +W+N+V W H+A + AEE G+T KN+++ Sbjct: 201 QRAKLANPDDHVVLPEIISKEPLGPLVRQGDDQWFNLVKWVHFAWLNAEEDGVTSKNLDE 260 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 +K + +P+++R LG + N GE LGLT+DW YRII+H+GNYGE+FDRNLG S+LKI Sbjct: 261 KTK-SESPEIKRLLGFE--GNFGEGLGLTRDWIYRIIKHVGNYGEVFDRNLGEGSKLKIK 317 Query: 324 RGYNALWSKGGLMYAPPIR 342 RG N LW+KGGL YAPP+R Sbjct: 318 RGINNLWTKGGLHYAPPVR 336 >gi|217977867|ref|YP_002362014.1| cationic amino acid ABC transporter, periplasmic binding protein [Methylocella silvestris BL2] gi|217503243|gb|ACK50652.1| cationic amino acid ABC transporter, periplasmic binding protein [Methylocella silvestris BL2] Length = 340 Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust. Identities = 180/335 (53%), Positives = 239/335 (71%), Gaps = 3/335 (0%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 ++ L ++ + A +L ++KRG++ CG N G+ GF G W GFDVDFCRA+ Sbjct: 9 TLFALGLMIGCAQGAQAGLLDQVQKRGYVICGSNPGVPGFGLPDDKGGWTGFDVDFCRAV 68 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 ++AIF+DP+K++++ L+AK+RF ALQS ++D+LSRNT WTL RE G F ITY+DGQ Sbjct: 69 AAAIFNDPTKVKFIALSAKDRFTALQSGEVDLLSRNTTWTLSRETGQGFLFAGITYYDGQ 128 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 GF++ KK +SS +LSGASICVQ GTTTEL LAD+F+ +NMKY P+ F EE A+ Sbjct: 129 GFLVRKKLNLSSALELSGASICVQQGTTTELNLADFFRGNNMKYEPVNFANAEEAVRAFE 188 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 RCDAYT D S LY + P + V+LP+IISK PL PA+ QGD W+N+V WT +A Sbjct: 189 GGRCDAYTTDASGLYVERQRLADPEDSVVLPEIISKEPLGPAVRQGDDGWFNVVKWTLFA 248 Query: 248 MVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYG 307 +V AEELG+T KN+++ +K + P+V+R LG + N GE LGL DW YRI++H+GNYG Sbjct: 249 LVNAEELGVTSKNVDEKAK-SDRPEVRRLLGFE--GNFGEPLGLDADWAYRIVKHVGNYG 305 Query: 308 EMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 E+FDRNLG+ S LKI RG NALW+KGGL YAPPIR Sbjct: 306 EIFDRNLGDSSPLKIKRGINALWTKGGLQYAPPIR 340 >gi|90419549|ref|ZP_01227459.1| lysine-arginine-ornithine-binding periplasmic protein [Aurantimonas manganoxydans SI85-9A1] gi|90336486|gb|EAS50227.1| lysine-arginine-ornithine-binding periplasmic protein [Aurantimonas manganoxydans SI85-9A1] Length = 334 Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust. Identities = 170/337 (50%), Positives = 244/337 (72%), Gaps = 3/337 (0%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 ++L L + +A L +K RG L+CG+NTGL GFA G W+G D+D+C+ Sbjct: 1 MTAVLGLTVAGVAVSGASAQTLQTVKDRGVLRCGVNTGLPGFASQNDQGAWQGLDIDYCK 60 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 A+++A+F DPSK++Y PL+A +RF ALQ+ ++D+L+RNT WT+ R+ +LGL F + Y+D Sbjct: 61 AIAAAVFGDPSKVEYSPLSAVQRFPALQNNEVDVLARNTTWTMDRDTTLGLTFAGVNYYD 120 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 GQGF++ K G++S +LSGA++CVQ+GTTTEL LADYF+ +NM+Y+P+V E ++++A Sbjct: 121 GQGFMVKKDLGVNSALELSGATVCVQSGTTTELNLADYFRTNNMEYNPVVIESQSDVNSA 180 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 Y + RCD T D S L A +L EH ILP+IISK PL PA+ QGDTEW+N+V WTH Sbjct: 181 YDSGRCDVLTTDASGLAASRLEMGNADEHTILPEIISKEPLGPAVRQGDTEWFNVVKWTH 240 Query: 246 YAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGN 305 A++ AEELG+TQ+N+ + K + NP+++R LG DK N GE++GL++DW II+ +GN Sbjct: 241 NALLNAEELGVTQENVEDM-KTSENPEIRRLLGEDK--NFGESIGLSQDWAVNIIKAVGN 297 Query: 306 YGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 YGE+F+RN+G + L+I RG NALW+KGGL Y PIR Sbjct: 298 YGEIFERNIGVDTPLEIARGQNALWTKGGLQYGMPIR 334 >gi|110633466|ref|YP_673674.1| cationic amino acid ABC transporter, periplasmic binding protein [Mesorhizobium sp. BNC1] gi|110284450|gb|ABG62509.1| general L-amino acid-binding protein [Chelativorans sp. BNC1] Length = 340 Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust. Identities = 166/336 (49%), Positives = 246/336 (73%), Gaps = 3/336 (0%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 ++L +++ +A+ L D+K RG L+CG+NTGL GFA GDW+G DVD+C+A+ Sbjct: 7 ALLGTVVIASAVIPASAATLDDVKNRGALRCGVNTGLPGFAFQNDQGDWQGLDVDYCKAV 66 Query: 68 SSAIFD-DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 ++A+F+ D +K+QY PL+A +RF ALQ+ ++D+L+RNT WT+ R+ +LGL F + Y+DG Sbjct: 67 AAAVFEGDATKVQYSPLSAVQRFPALQNNEVDLLARNTTWTMNRDTALGLNFVGVNYYDG 126 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 QGF++ + ++S QLSGA++CVQ+GTTTEL L DYF+A+NM+++P+V E+ ++++AY Sbjct: 127 QGFMVRQDLNVTSALQLSGATVCVQSGTTTELNLTDYFRANNMEFNPVVIEQQSDVNSAY 186 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 RCD T D S LYA +L P +HV+LP+IISK PL P + QGD +W++IV W H+ Sbjct: 187 EQGRCDVLTTDASGLYASRLELSNPDDHVVLPEIISKEPLGPVVRQGDEQWFDIVKWVHF 246 Query: 247 AMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNY 306 ++ AEELG+TQ N+ ++ ++ NPDV+R LG D + G+ +GLT DW +I+ +GNY Sbjct: 247 GLINAEELGVTQDNVEDMAANSENPDVRRLLGADGT--FGQDVGLTNDWMVNVIKAVGNY 304 Query: 307 GEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GE+FDRN+G + LKI RG NALW+KGGL YAPP+R Sbjct: 305 GEIFDRNVGPNTPLKIQRGLNALWTKGGLQYAPPVR 340 >gi|159184823|ref|NP_354575.2| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|159140108|gb|AAK87360.2| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 312 Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust. Identities = 166/313 (53%), Positives = 235/313 (75%), Gaps = 1/313 (0%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 +K +GF+ CG++ G+ GF+ G+W G DVD+CR +++A+F DPSK +++ L++K+RF Sbjct: 1 MKGKGFVTCGVSAGIPGFSNPDDKGEWSGIDVDYCRGIATAVFGDPSKAKFVALSSKDRF 60 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 ALQS ++D+L+RNT WT+ R+ SLG FR + Y+DGQGFI K + S +LSGA++C Sbjct: 61 PALQSGEVDVLTRNTTWTISRDTSLGFNFRTVNYYDGQGFIAKKGLNVKSALELSGAAVC 120 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 VQ GTTTEL LADYFK +N++Y+P+VFE+ + +AY + RCD YT D S LYA++L Sbjct: 121 VQTGTTTELNLADYFKTNNLQYNPVVFEKESDATSAYDSGRCDVYTTDQSGLYAIRLKLK 180 Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 P ++++LP++ISK PL PA+ QGD +W++IV+W HYAMV AEELGIT KN+++ K + Sbjct: 181 NPDDNIVLPEVISKEPLGPAVRQGDDQWFDIVTWVHYAMVNAEELGITSKNVDE-QKTSA 239 Query: 270 NPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNAL 329 NPDV+R LG ++ + IG LG+ DW Y I++ +GNYGE+FDRN+G S LKI RG NAL Sbjct: 240 NPDVKRLLGTEEGTKIGTDLGVGNDWAYNIVKLVGNYGEVFDRNVGAGSPLKIERGQNAL 299 Query: 330 WSKGGLMYAPPIR 342 W+KGGL YAPP+R Sbjct: 300 WTKGGLQYAPPVR 312 >gi|330504740|ref|YP_004381609.1| extracellular solute-binding protein [Pseudomonas mendocina NK-01] gi|328919026|gb|AEB59857.1| extracellular solute-binding protein [Pseudomonas mendocina NK-01] Length = 342 Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust. Identities = 172/342 (50%), Positives = 240/342 (70%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + +L + F+ + L ++K+GF++CGI+ GL GF+ G++ G D Sbjct: 3 MVKSTLAVLTTAAVLGVSGFAQAGATLDAVQKKGFVQCGISDGLPGFSYADEKGNYLGLD 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD CRA+++A+F D +K++Y PL AKERF ALQS ++DILSRNT WT R+ +LGL F Sbjct: 63 VDVCRAVAAAVFGDATKVKYSPLTAKERFTALQSGEVDILSRNTTWTSSRDAALGLNFTG 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DGQGF+++KK G+SS +L GA++C+QAGTTTEL L+DYF+A+ MKY PI ++ + Sbjct: 123 VTYYDGQGFLVNKKLGVSSAKELDGATVCIQAGTTTELNLSDYFRANGMKYTPITYDTSD 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + A RCD T D S LYA ++ P ++V+LP++ISK PL P++ QGD EW++I Sbjct: 183 ESAKSVEAGRCDVLTSDQSQLYAQRIKLANPDDYVVLPEVISKEPLGPSVRQGDEEWFDI 242 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEELG+T N+ + +K T NPDV R LG + G+ L L KDW +I+ Sbjct: 243 VRWTLFAMLNAEELGVTSANVEETAKTTKNPDVARLLGAE--GEFGKDLKLPKDWAVQIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE FDRN+G SELKI RG NALW+KGGL YAPP+R Sbjct: 301 KQVGNYGESFDRNVGAGSELKIERGLNALWNKGGLQYAPPVR 342 >gi|307942366|ref|ZP_07657717.1| general L-amino acid-binding periplasmic protein AapJ [Roseibium sp. TrichSKD4] gi|307774652|gb|EFO33862.1| general L-amino acid-binding periplasmic protein AapJ [Roseibium sp. TrichSKD4] Length = 371 Score = 382 bits (980), Expect = e-104, Method: Compositional matrix adjust. Identities = 170/316 (53%), Positives = 232/316 (73%), Gaps = 3/316 (0%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L D+K +GF++CG++ GL GF+ + G+W G DVD CRA+++AIFDD + +++ PL+AK Sbjct: 59 LDDVKAKGFVQCGVSQGLPGFSNPDSQGNWTGLDVDVCRAMAAAIFDDVNAVKFTPLSAK 118 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 ERF ALQS +ID+LSRNT WT+ R+ SLGL F + Y+DGQGF++ K G++S +LSGA Sbjct: 119 ERFTALQSGEIDVLSRNTTWTMTRDTSLGLNFAGVNYYDGQGFMVRKDLGVTSALELSGA 178 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 S+C GTTTEL +ADYF+A+NM Y + FE+ +E+ AAY A RCD YT D S LYA +L Sbjct: 179 SVCTNTGTTTELNVADYFRANNMPYEIVAFEKADEVVAAYDAGRCDVYTTDASGLYAQRL 238 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 P +H++LP+IISK PL P + QGD +W+N+V WT AM+ AEELG+T N++ + K Sbjct: 239 KLTNPGDHMVLPEIISKEPLGPVVRQGDDQWFNLVKWTLNAMINAEELGVTSANVDDM-K 297 Query: 267 DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGY 326 + NP V+R LG + + GE +GLT DW RII+H+GNYGE FD N+G + L I RG Sbjct: 298 GSDNPSVKRLLGTEGA--YGENIGLTNDWAARIIKHVGNYGESFDANVGPDTPLGIARGV 355 Query: 327 NALWSKGGLMYAPPIR 342 NALWSKGG++YAPP+R Sbjct: 356 NALWSKGGVLYAPPVR 371 >gi|316934242|ref|YP_004109224.1| cationic amino acid ABC transporter periplasmic-binding protein [Rhodopseudomonas palustris DX-1] gi|315601956|gb|ADU44491.1| cationic amino acid ABC transporter, periplasmic binding protein [Rhodopseudomonas palustris DX-1] Length = 338 Score = 381 bits (979), Expect = e-104, Method: Compositional matrix adjust. Identities = 171/322 (53%), Positives = 235/322 (72%), Gaps = 3/322 (0%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 S +A L +K RG L CG++ GL GF+ G+W G DVD CRA+++AIFDDPSK+++ Sbjct: 20 SADAQTLKTVKDRGMLSCGVSQGLPGFSSPDDKGNWTGLDVDVCRAIAAAIFDDPSKVKF 79 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +PL+AK+RF ALQS +ID+LSRNT WTL R+ SLG+ F I+Y+DGQGF+ K ++S Sbjct: 80 VPLSAKDRFTALQSGEIDVLSRNTTWTLSRDTSLGVNFAGISYYDGQGFMAKKALKVNSA 139 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 +L+GASICVQ GTT E +ADYFK +NMKY I F +E AY RCD +T D+S Sbjct: 140 LELNGASICVQTGTTNEQNVADYFKGNNMKYEVIAFANADEAVKAYETGRCDVFTSDVSQ 199 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 LYA +L P++H++LP++ISK PL P + GD +W++IV WT + ++ AEELG+TQKN Sbjct: 200 LYAQRLKLATPADHIVLPEVISKEPLGPLVRHGDDQWFDIVKWTLFGLINAEELGVTQKN 259 Query: 261 INQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSEL 320 +++++K + P+++R G D N+GE LGLTKDW RII+ GNYGE F+RN+G+ S+L Sbjct: 260 VDEMAK-SDKPELKRVFGTD--GNLGEQLGLTKDWVARIIKATGNYGESFERNVGSGSKL 316 Query: 321 KIPRGYNALWSKGGLMYAPPIR 342 +I RG N LW+KGG+MYAPPIR Sbjct: 317 EIARGLNKLWNKGGIMYAPPIR 338 >gi|146340850|ref|YP_001205898.1| putative amino-acid ABC transporter substrate-binding protein [Bradyrhizobium sp. ORS278] gi|146193656|emb|CAL77673.1| putative amino-acid ABC transporter, substrate-binding protein [Bradyrhizobium sp. ORS278] Length = 338 Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust. Identities = 171/326 (52%), Positives = 235/326 (72%), Gaps = 3/326 (0%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 S A L +K RG L CG++ GL GF+ G+W G DVD CRA+++AIF+DP+ Sbjct: 16 LASVGAQAETLKTVKDRGMLACGVSQGLPGFSNPDDKGNWTGLDVDVCRAIAAAIFNDPT 75 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 K++Y+PL+AK+RF ALQS ++D+LSRNT WTL R+ SLG F ITY+DGQGF++ K Sbjct: 76 KVKYVPLSAKDRFTALQSGEVDVLSRNTTWTLSRDTSLGANFAGITYYDGQGFMVKKALK 135 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 ++S +L+ AS+CVQ GTTTE LADYFKA+ MKY I F +E AY + RCD +T Sbjct: 136 VNSALELNSASVCVQTGTTTEQNLADYFKANKMKYEVIAFAGADETVKAYESGRCDVFTT 195 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 D+S LYA +L P++HV+LP++ISK PL P + GD +W++IV WT + ++TAEE+G+ Sbjct: 196 DVSGLYAERLKLANPADHVVLPEVISKEPLGPMVRHGDDQWFDIVKWTLFGLITAEEMGV 255 Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316 TQ N+++++K + PD +R G D N+GE LGLTKDW RI++ +GNYGEM+DRN+G+ Sbjct: 256 TQANVDEMAK-SDKPDFKRAFGTD--GNLGEQLGLTKDWFSRIVKAVGNYGEMYDRNVGS 312 Query: 317 QSELKIPRGYNALWSKGGLMYAPPIR 342 S+L+I RG N LW+KGGL YAPPIR Sbjct: 313 GSKLQIARGLNQLWNKGGLQYAPPIR 338 >gi|146308575|ref|YP_001189040.1| extracellular solute-binding protein [Pseudomonas mendocina ymp] gi|145576776|gb|ABP86308.1| amino acid ABC transporter substrate-binding protein, PAAT family [Pseudomonas mendocina ymp] Length = 342 Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust. Identities = 171/342 (50%), Positives = 237/342 (69%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + +L + F+ + L ++K+GF++CGI+ GL GF+ G++ G D Sbjct: 3 MVKSTLAVLTTAAVLGVSGFAQAGATLDAVQKKGFVQCGISDGLPGFSYADEKGNYLGLD 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD CRA+++A+F D +K++Y PL AKERF ALQS ++DILSRNT WT R+ LGL F Sbjct: 63 VDVCRAVAAAVFGDATKVKYSPLTAKERFTALQSGEVDILSRNTTWTSSRDSGLGLNFAG 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF+++KK G+SS +L GA++C+QAGTTTEL L+DYF+A+ +KY PI ++ + Sbjct: 123 VNYYDGQGFLVNKKLGVSSAKELDGATVCIQAGTTTELNLSDYFRANGLKYTPITYDTSD 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + A RCD T D S LYA ++ P ++V+LP++ISK PL P + QGD EW+NI Sbjct: 183 ESAKSVEAGRCDVLTSDQSQLYAQRIKLANPDDYVVLPEVISKEPLGPVVRQGDDEWFNI 242 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V W+ +AMV AEELG+T N+ + +K T NPDV R LG + G+ L L KDW +I+ Sbjct: 243 VRWSLFAMVNAEELGVTSANVEETAKTTKNPDVARLLGAE--GEFGKDLKLPKDWAVQIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE FDRN+G SELKI RG NALW+KGGL YAPP+R Sbjct: 301 KQVGNYGESFDRNVGAGSELKIERGLNALWNKGGLQYAPPVR 342 >gi|91977030|ref|YP_569689.1| lysine-arginine-ornithine-binding periplasmic protein [Rhodopseudomonas palustris BisB5] gi|91683486|gb|ABE39788.1| Lysine-arginine-ornithine-binding periplasmic protein [Rhodopseudomonas palustris BisB5] Length = 338 Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust. Identities = 171/330 (51%), Positives = 236/330 (71%), Gaps = 3/330 (0%) Query: 13 IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72 I F + S A L +K RG L CG++ GL GF+ G+W G DVD CRA+++AIF Sbjct: 12 ITACFAAQSAGAQTLKTVKDRGLLSCGVSQGLPGFSAPDDKGNWTGLDVDLCRAVAAAIF 71 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 DDPSK++++PL+AK+RF ALQS +ID+LSRNT WT+ R+ SLG+ F ++Y+DGQGF++ Sbjct: 72 DDPSKVKFVPLSAKDRFTALQSGEIDVLSRNTTWTVSRDTSLGVNFAGVSYYDGQGFLVK 131 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 K ++S +L+ ASICVQ GTT E +ADYFK +NMKY I F +E AY + RCD Sbjct: 132 KALKVNSALELNSASICVQTGTTNEQNVADYFKGNNMKYEVIAFANADEAIKAYESGRCD 191 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 +T D+S LYA +L P++HV+LP++ISK PL P + GD +W++IV WT +A+V AE Sbjct: 192 VFTSDVSQLYAQRLKVTTPADHVVLPEVISKEPLGPLVRHGDDQWFDIVKWTLFALVNAE 251 Query: 253 ELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDR 312 ELG+TQ N+ +++K + P+++R G D N+GE LGLTKDW RI++ GNYGE F+R Sbjct: 252 ELGVTQSNVGEMAK-SDKPELKRVFGSD--GNLGEQLGLTKDWVARIVKATGNYGESFER 308 Query: 313 NLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 N+G S+L+I RG N LW+KGG+MYAPPIR Sbjct: 309 NVGTGSKLEIARGLNKLWNKGGIMYAPPIR 338 >gi|39935626|ref|NP_947902.1| ABC transporter periplasmic amino acid binding protein aapJ-1 [Rhodopseudomonas palustris CGA009] gi|39649479|emb|CAE28001.1| ABC transporter, periplasmic amino acid binding protein aapJ-1 [Rhodopseudomonas palustris CGA009] Length = 338 Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust. Identities = 169/320 (52%), Positives = 235/320 (73%), Gaps = 3/320 (0%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 +A L +K RG L CG++ GL GF+ G+W G DVD CRA+++A+FDDPSK++++P Sbjct: 22 DAQTLKTVKDRGMLSCGVSQGLPGFSAPDDKGNWAGLDVDVCRAIAAAVFDDPSKVKFVP 81 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 L+AK+RF ALQS +ID+LSRNT WTL R+ SLG+ F ++Y+DGQGF+ K ++S + Sbjct: 82 LSAKDRFTALQSGEIDVLSRNTTWTLSRDTSLGVNFAGVSYYDGQGFMAKKSLKVNSALE 141 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+GASICVQ GTT E +ADYFK +NMKY I F +E AY + RCD +T D+S LY Sbjct: 142 LNGASICVQTGTTNEQNVADYFKGNNMKYEVIAFANADEAVKAYESGRCDVFTSDVSQLY 201 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 A +L P++H +LP++ISK PL P + GD +W++IV WT +A+V AEELG+TQKN++ Sbjct: 202 AQRLKLATPADHAVLPEVISKEPLGPLVRHGDDQWFDIVKWTLFALVNAEELGVTQKNVD 261 Query: 263 QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKI 322 +++K + P+++R G D N+GE LGLTKDW RI++ GNYGE F+RN+G+ S+L+I Sbjct: 262 EMAK-SDKPELKRVFGTD--GNLGEQLGLTKDWVARIVKATGNYGESFERNVGSGSKLEI 318 Query: 323 PRGYNALWSKGGLMYAPPIR 342 RG N LW+KGG+MYAPPIR Sbjct: 319 ARGLNKLWNKGGIMYAPPIR 338 >gi|158423209|ref|YP_001524501.1| extracellular solute-binding protein [Azorhizobium caulinodans ORS 571] gi|158330098|dbj|BAF87583.1| extracellular solute-binding protein [Azorhizobium caulinodans ORS 571] Length = 336 Score = 378 bits (970), Expect = e-103, Method: Compositional matrix adjust. Identities = 172/329 (52%), Positives = 236/329 (71%), Gaps = 3/329 (0%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 +L T+ + A L D+K RG L CG++ GL GF+ G+WKG DVDFCRA+++AIF+ Sbjct: 11 VLALTAGAAKAGTLDDVKARGALNCGVSQGLPGFSSPDDKGNWKGLDVDFCRAVAAAIFN 70 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 DP+K+++ PL+AK+RF ALQS ID+LSRNT WT+ R+ +LG F + Y+DGQGFI+ K Sbjct: 71 DPNKVRFTPLSAKDRFTALQSGAIDLLSRNTTWTMSRDTTLGFNFAGVMYYDGQGFIVRK 130 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 I S +L+GASICVQAGTTTEL L D+F+A+NMKY I F +E AY + RCD+ Sbjct: 131 SLNIKSAKELNGASICVQAGTTTELNLGDFFRANNMKYEVITFSTEDETVKAYESGRCDS 190 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 +T D S +YA+KL ++HV+LP++ISK PL P + GD +W+++V WT+YA++ +EE Sbjct: 191 FTSDQSQIYAIKLKLTNAADHVVLPELISKEPLGPLVRHGDDQWFDLVKWTYYALLNSEE 250 Query: 254 LGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRN 313 LG++QK ++Q S +TNP+++R LG D GE +GLT DW RII+ +GNYGE+FDRN Sbjct: 251 LGVSQKTLDQ-SMTSTNPEIKRLLGTD--GKFGEGIGLTNDWVVRIIKAVGNYGEIFDRN 307 Query: 314 LGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +G S L I RG N LW+KGGL Y PIR Sbjct: 308 VGTGSPLGIDRGENKLWNKGGLQYGMPIR 336 >gi|83648448|ref|YP_436883.1| amino acid ABC transporter periplasmic protein [Hahella chejuensis KCTC 2396] gi|83636491|gb|ABC32458.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Hahella chejuensis KCTC 2396] Length = 339 Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust. Identities = 170/342 (49%), Positives = 236/342 (69%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F ++ L + T + L +KK+GF++CG++TGL GF+ G+W G D Sbjct: 1 MKKTFVSAVAALGFMTATGAAMADGTLDAVKKKGFVQCGVSTGLPGFSNPDDKGNWMGLD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD CRA+++A D SK++Y+PL AKERF ALQS +ID+LSRNT WTL R+ SLGL F Sbjct: 61 VDLCRAVAAATLGDASKVKYIPLTAKERFTALQSGEIDLLSRNTTWTLTRDGSLGLNFAG 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K G+ S +L GA++C+QAGTTTEL LADYF+ MKY P+VF+ + Sbjct: 121 VNYYDGQGFLVSKDLGVKSAKELDGAAVCIQAGTTTELNLADYFREFGMKYQPVVFDTSD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + + A RCD T D S LYAL++ P + ++LP++ISK PL P + QGD +W+NI Sbjct: 181 QTVKGFEAGRCDVLTSDQSQLYALRIQLSNPDKAMVLPEVISKEPLGPVVRQGDDQWFNI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V W+ +A +TAEELG++ N++++ K +TNP+VQR LG + G+ LGL W + I+ Sbjct: 241 VKWSLFAAITAEELGVSSDNVDKM-KSSTNPNVQRLLGAEAGQ--GKNLGLDDTWAFNIV 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGEMF+RN+G S L I RG NALW+KGGL YAPPIR Sbjct: 298 KQVGNYGEMFERNVGKSSPLGIERGLNALWTKGGLQYAPPIR 339 >gi|192291210|ref|YP_001991815.1| extracellular solute-binding protein family 3 [Rhodopseudomonas palustris TIE-1] gi|192284959|gb|ACF01340.1| extracellular solute-binding protein family 3 [Rhodopseudomonas palustris TIE-1] Length = 353 Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust. Identities = 165/313 (52%), Positives = 233/313 (74%), Gaps = 3/313 (0%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 +++ G L CG++ GL GF+ G+W G DVD CRA+++A+FDDPSK++++PL+AK+RF Sbjct: 44 VRENGALSCGVSQGLPGFSAPDDKGNWAGLDVDVCRAIAAAVFDDPSKVKFVPLSAKDRF 103 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 ALQS +ID+LSRNT WTL R+ SLG++F ++Y+DGQGF+ K ++S +L+GASIC Sbjct: 104 TALQSGEIDVLSRNTTWTLSRDTSLGVSFAGVSYYDGQGFMAKKSLKVNSALELNGASIC 163 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 VQ GTT E +ADYFK +NMKY I F +E AY + RCD +T D+S LYA +L Sbjct: 164 VQTGTTNEQNVADYFKGNNMKYEVIAFANADEAVKAYESGRCDVFTSDVSQLYAQRLKLA 223 Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 P++H +LP++ISK PL P + GD +W++IV WT +A+V AEELG+TQKN+++++K + Sbjct: 224 TPADHAVLPEVISKEPLGPLVRHGDDQWFDIVKWTLFALVNAEELGVTQKNVDEMAK-SD 282 Query: 270 NPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNAL 329 P+++R G D N+GE LGLTKDW RI++ GNYGE F+RN+G+ S+L+I RG N L Sbjct: 283 KPELKRVFGTD--GNLGEQLGLTKDWVARIVKATGNYGESFERNVGSGSKLEIARGLNKL 340 Query: 330 WSKGGLMYAPPIR 342 W+KGG+MYAPPIR Sbjct: 341 WNKGGIMYAPPIR 353 >gi|148255314|ref|YP_001239899.1| putative amino-acid ABC transporter substrate-binding protein [Bradyrhizobium sp. BTAi1] gi|146407487|gb|ABQ35993.1| general L-amino acid-binding protein [Bradyrhizobium sp. BTAi1] Length = 338 Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust. Identities = 172/327 (52%), Positives = 235/327 (71%), Gaps = 3/327 (0%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 S A L +K RG L CG++ GL GF+ G+W G DVD CRA+++AIF+DP Sbjct: 15 ILASVGAQADTLKTVKDRGMLACGVSQGLPGFSSPDDKGNWTGIDVDVCRAVAAAIFNDP 74 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 +KI+++PL+AK+RF ALQS +ID+LSRNT WTL R+ SLG F +TY+DGQGF++ K Sbjct: 75 TKIKFVPLSAKDRFTALQSGEIDVLSRNTTWTLSRDTSLGANFAGVTYYDGQGFMVKKAL 134 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 ++S +L+ AS+CVQ GTTTE LADYFKA+ MKY I F +E AY + RCD YT Sbjct: 135 KVNSALELNSASVCVQTGTTTEQNLADYFKANKMKYEVIAFAGADETVKAYESGRCDVYT 194 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D+S LYA +L P++HV+LP++ISK PL P + GD +W++IV WT +A+VTAEELG Sbjct: 195 TDVSGLYAERLKLANPADHVVLPEVISKEPLGPMVRHGDDQWFDIVKWTLFALVTAEELG 254 Query: 256 ITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLG 315 +TQ N+++++K + P+ +R G D N+GE LGLTKDW RI++ +GNYGE+++RN+G Sbjct: 255 VTQANVDEMAK-SDKPEFKRAFGTD--GNLGEQLGLTKDWFSRIVKAVGNYGEVYERNVG 311 Query: 316 NQSELKIPRGYNALWSKGGLMYAPPIR 342 S+L+I RG N LW+KGGL YAPPIR Sbjct: 312 AGSKLQIARGLNQLWNKGGLQYAPPIR 338 >gi|288958131|ref|YP_003448472.1| general L-amino acid transport system substrate-binding protein [Azospirillum sp. B510] gi|288910439|dbj|BAI71928.1| general L-amino acid transport system substrate-binding protein [Azospirillum sp. B510] Length = 339 Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust. Identities = 169/317 (53%), Positives = 237/317 (74%), Gaps = 4/317 (1%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L +K+RGF++CG+N GL GF + G+W G DVD+CRA++ AIF D +K+++ PL+A+ Sbjct: 26 LDTVKQRGFVQCGVNAGLPGFGNPDSAGNWTGLDVDYCRAVAVAIFGDANKVKFTPLSAQ 85 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 +RF A+QS ++D+LSRNT TL R+ S+GL F P+TY+DGQGF++ KK G+ S +L+GA Sbjct: 86 QRFPAIQSGEVDLLSRNTTVTLTRDTSVGLNFAPVTYYDGQGFMVPKKLGVKSAKELNGA 145 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 ++CVQ+GTTTEL LADYF+A+NM Y+P+V E +E++AAY A RCD T D+S L + Sbjct: 146 TVCVQSGTTTELNLADYFRANNMTYNPVVIESNDEVNAAYFAGRCDVLTTDVSGLAGTRA 205 Query: 207 -TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 P +HVILP++ISK PLAPA+ GD +W++IV WT YA + AEE GIT KNI++ + Sbjct: 206 GVAPVPDDHVILPEVISKEPLAPAVRHGDDQWFDIVKWTVYATIQAEEFGITSKNIDEFA 265 Query: 266 KDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRG 325 ++ NPD+QRFLG S +G+A+GL + W Y I++ +GNY E+FDRN+G + LK+ RG Sbjct: 266 -NSKNPDIQRFLGT--SPGMGKAMGLDEKWAYNIVKKVGNYAEIFDRNVGPATPLKLERG 322 Query: 326 YNALWSKGGLMYAPPIR 342 NALW+KGGLMYA P R Sbjct: 323 LNALWTKGGLMYAQPFR 339 >gi|118589034|ref|ZP_01546441.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Stappia aggregata IAM 12614] gi|118438363|gb|EAV44997.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Stappia aggregata IAM 12614] Length = 326 Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust. Identities = 165/316 (52%), Positives = 230/316 (72%), Gaps = 3/316 (0%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L D+K +GF++CG++ GL GF+ A G+W G DVD+CRA+++A+F D S ++Y PL+AK Sbjct: 14 LEDVKAKGFIQCGVSQGLPGFSNPDAQGNWTGIDVDYCRAMAAAVFGDASAVKYTPLSAK 73 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 ERF ALQS ++D+LSRNT WT+ R+ LGL F + Y+DGQGF++ K G++S +LSGA Sbjct: 74 ERFTALQSGEVDVLSRNTTWTMSRDTQLGLNFAGVNYYDGQGFMVRKDLGVTSALELSGA 133 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 S+C GTTTEL +ADYF+A+NM Y + FE+ +E+ AAY A RCD YT D S LYA +L Sbjct: 134 SVCTNTGTTTELNVADYFRANNMPYEIVAFEKADEVVAAYDAGRCDVYTTDASGLYAQRL 193 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 P +H++LP+IISK PL P + QGD EW+NI WT AM+ AEELG+T +N++++ K Sbjct: 194 KLTNPGDHMVLPEIISKEPLGPVVRQGDDEWFNIAKWTLNAMLNAEELGVTSENVDEM-K 252 Query: 267 DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGY 326 + NP ++R LG++ + GEA+GL DW Y II+++GNY E F+ N+G + L I RG Sbjct: 253 SSDNPSIKRLLGVEGA--FGEAIGLPNDWAYAIIKNVGNYEESFNANVGPDTPLGISRGV 310 Query: 327 NALWSKGGLMYAPPIR 342 NALW+ GG MYAPP+R Sbjct: 311 NALWNDGGFMYAPPVR 326 >gi|299133835|ref|ZP_07027029.1| cationic amino acid ABC transporter, periplasmic binding protein [Afipia sp. 1NLS2] gi|298591671|gb|EFI51872.1| cationic amino acid ABC transporter, periplasmic binding protein [Afipia sp. 1NLS2] Length = 339 Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust. Identities = 170/335 (50%), Positives = 238/335 (71%), Gaps = 5/335 (1%) Query: 10 LCLIILFFTSFS-TNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 + + +F S S NA + L +++RG L CG++ GL GF+ G W G DVDFCRAL Sbjct: 8 IVMTSVFLGSLSPVNAQATLKAVQERGVLSCGVSQGLPGFSAPDDTGKWSGLDVDFCRAL 67 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 ++ + +DP K++++PL+AK+RF ALQS +ID+LSRNT W+L R+ SLGL F + Y+DGQ Sbjct: 68 AAVVLNDPLKVKFVPLSAKDRFTALQSGEIDVLSRNTTWSLSRDTSLGLNFTAVMYYDGQ 127 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 GF++ K ++S +L+GAS+CVQ GTT E LADYF+A+NMKY + F +E AY Sbjct: 128 GFLVRKALKVNSALELNGASVCVQTGTTNEQNLADYFRANNMKYEVVAFSTADETIKAYE 187 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 + RCD +T D+S LYA +L P +HV+LP+IISK PL P + GD +W++IV WT +A Sbjct: 188 SGRCDVFTSDVSQLYAERLKLTVPDDHVVLPEIISKEPLGPVVRHGDDQWFDIVKWTLFA 247 Query: 248 MVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYG 307 M+ AEEL +TQKN+ +++K + P++ R LG D N+GE LGLTKDW RI++ +GNYG Sbjct: 248 MINAEELNVTQKNVGEMTK-SNKPEIARLLGTD--GNLGEQLGLTKDWVVRIVKAVGNYG 304 Query: 308 EMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 E FDRN+G S+L+I RG N LW++GG+ YAPPIR Sbjct: 305 ESFDRNVGAGSKLRISRGLNKLWNQGGIQYAPPIR 339 >gi|327479738|gb|AEA83048.1| extracellular solute-binding protein [Pseudomonas stutzeri DSM 4166] Length = 342 Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust. Identities = 165/326 (50%), Positives = 236/326 (72%), Gaps = 2/326 (0%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 + + + L ++K+GF++CGI+ GL GF+ A G ++G DVD CRA+++A+F D + Sbjct: 19 ISGLAQAGATLDAVQKKGFVQCGISDGLPGFSFADAKGQFQGIDVDVCRAVAAAVFGDAT 78 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 K++Y PL AKERF ALQS ++D+LSRNT WT R+ ++GL F +TY+DGQGF+++K+ G Sbjct: 79 KVKYSPLTAKERFTALQSGEVDVLSRNTTWTSSRDAAMGLNFTGVTYYDGQGFLVNKELG 138 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 +SS +L GA++C+QAGTTTEL L+DYF+A+ KY PI ++ +E + + RCD T Sbjct: 139 VSSAKELDGATVCIQAGTTTELNLSDYFRANGHKYTPITYDTSDESAKSLESGRCDVLTS 198 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 D S LYA ++ +P ++V+LP++ISK PL PA+ QGD EW++IV WT +AM+ AEELG+ Sbjct: 199 DQSQLYAQRIKLAKPDDYVVLPEVISKEPLGPAVRQGDEEWFDIVRWTLFAMLNAEELGV 258 Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316 T N+ ++K T NPDV R LG + G+ L L KDW +I++ +GNYGE+FDRN+G Sbjct: 259 TSANVEDMAKSTKNPDVARLLGAE--GEYGKDLRLPKDWAVQIVKQVGNYGEIFDRNVGA 316 Query: 317 QSELKIPRGYNALWSKGGLMYAPPIR 342 SELKI RG NALW+KGGL YAPP+R Sbjct: 317 GSELKIERGLNALWNKGGLQYAPPVR 342 >gi|92117599|ref|YP_577328.1| extracellular solute-binding protein [Nitrobacter hamburgensis X14] gi|91800493|gb|ABE62868.1| amino acid ABC transporter substrate-binding protein, PAAT family [Nitrobacter hamburgensis X14] Length = 344 Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust. Identities = 165/318 (51%), Positives = 232/318 (72%), Gaps = 3/318 (0%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 + L +K RG L CG++ GL GF+ G+W G DVD CRA+++ +F+DP+K++++PL+ Sbjct: 30 TTLEAVKTRGMLSCGVSQGLPGFSAPDDKGNWTGLDVDVCRAIAAVVFNDPTKVKFVPLS 89 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 AK+RF+ALQS +ID+LSRNT WTL R+ SLG F +TY+DGQGF++ K ++S +L+ Sbjct: 90 AKDRFIALQSGEIDVLSRNTTWTLSRDTSLGANFTGVTYYDGQGFLVRKSLKVNSALELN 149 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 AS+CVQ GTTTE LADYFK++ MKY I F +E AY + RCD +T DIS LYA Sbjct: 150 SASVCVQTGTTTEQNLADYFKSNKMKYEVIAFSTADETIKAYESGRCDVFTSDISQLYAE 209 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 +L P++H +LP++ISK PL P + GD +W+++V WT +AM+ AEELGITQKN++++ Sbjct: 210 RLKLSNPADHAVLPEVISKEPLGPMVRHGDDQWFDLVKWTLFAMIDAEELGITQKNVDEM 269 Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324 +K + NP+++R G D N GE LG+TKDW RI++ +GNYGE FDRN+G S+L I R Sbjct: 270 AK-SNNPELKRVFGTD--GNFGEQLGVTKDWVSRIVKAVGNYGESFDRNVGAGSKLGIAR 326 Query: 325 GYNALWSKGGLMYAPPIR 342 G N LW++GG+ YAPPIR Sbjct: 327 GLNRLWNQGGIQYAPPIR 344 >gi|86750029|ref|YP_486525.1| extracellular solute-binding protein [Rhodopseudomonas palustris HaA2] gi|86573057|gb|ABD07614.1| extracellular solute-binding protein, family 3 [Rhodopseudomonas palustris HaA2] Length = 337 Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust. Identities = 167/322 (51%), Positives = 231/322 (71%), Gaps = 3/322 (0%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 S A L +K RG L CG++ GL GF+ G+W G DVD CR +++AIFDDPSK+++ Sbjct: 19 SAGAQTLKTVKDRGILSCGVSQGLPGFSAPDDKGNWTGLDVDVCRGIAAAIFDDPSKVKF 78 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +PL+AK+RF ALQS +ID+LSRNT WTL R+ SLG+ F ++Y+DGQGF++ K ++S Sbjct: 79 VPLSAKDRFTALQSGEIDVLSRNTTWTLSRDTSLGVNFAGVSYYDGQGFLVKKALKVNSA 138 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 +L+ AS+CVQ GTT E +ADYFK +NMKY I F +E AY + RCD +T D+S Sbjct: 139 LELNSASVCVQTGTTNEQNVADYFKGNNMKYEVIAFANADEAIKAYESGRCDVFTSDVSQ 198 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 LYA +L P++HV+LP++ISK PL P + GD +W+++V WT +AM+ AEELG+TQ N Sbjct: 199 LYAQRLKLATPADHVVLPEVISKEPLGPLVRHGDDQWFDVVKWTLFAMINAEELGVTQSN 258 Query: 261 INQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSEL 320 + +++K + P+++R G D N+GE LGLTKDW RII+ GNYGE F+RN+G S+L Sbjct: 259 VAEMAK-SDKPELRRVFGTD--GNLGEQLGLTKDWVARIIKATGNYGESFERNVGAGSKL 315 Query: 321 KIPRGYNALWSKGGLMYAPPIR 342 +I RG N W+KGG+MYAPPIR Sbjct: 316 EIARGLNKPWNKGGIMYAPPIR 337 >gi|209885181|ref|YP_002289038.1| general L-amino acid-binding periplasmic protein AapJ [Oligotropha carboxidovorans OM5] gi|209873377|gb|ACI93173.1| general L-amino acid-binding periplasmic protein AapJ [Oligotropha carboxidovorans OM5] Length = 338 Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust. Identities = 169/320 (52%), Positives = 228/320 (71%), Gaps = 3/320 (0%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 +A L IK RG L CG++ GL GF+ G W G DVDFCRALS+AIF+DP K++++P Sbjct: 22 SAQTLKTIKDRGVLSCGVSQGLPGFSAPDDTGKWSGLDVDFCRALSAAIFNDPLKVKFVP 81 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 L+AK+RF ALQS +ID+LSRNT W++ R+ SLGL F + Y+DGQGF++ K ++S + Sbjct: 82 LSAKDRFTALQSGEIDVLSRNTTWSMSRDTSLGLNFTAVMYYDGQGFLVRKSLKVNSALE 141 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+GAS+CVQ GTT E LADYF+A+ MKY + F +E AY + RCDA+T D+S LY Sbjct: 142 LNGASVCVQTGTTNEQNLADYFRANGMKYEVVAFATADETMKAYESGRCDAFTSDVSQLY 201 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 A +L P +H +LPDIISK PL P + GD +W++IV WT +A++ AEEL +TQKN+ Sbjct: 202 AERLKLTVPDDHAVLPDIISKEPLGPVVRHGDDQWFDIVKWTLFALLNAEELAVTQKNVG 261 Query: 263 QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKI 322 + K + P++ R LG D N GE LGLTKDW RI++ +GNYGE FDRN+G S+L+I Sbjct: 262 DMVK-SNKPEIARLLGSD--GNFGEQLGLTKDWVVRIVKAVGNYGESFDRNVGAGSKLRI 318 Query: 323 PRGYNALWSKGGLMYAPPIR 342 RG N LW++GG+ YAPP+R Sbjct: 319 SRGLNKLWNQGGIQYAPPVR 338 >gi|89092424|ref|ZP_01165378.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Oceanospirillum sp. MED92] gi|89083512|gb|EAR62730.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Oceanospirillum sp. MED92] Length = 354 Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust. Identities = 168/337 (49%), Positives = 230/337 (68%), Gaps = 3/337 (0%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 S++ + SF A L D++KRG + CG++TGL GF++ NG W G DVD CR Sbjct: 21 LTSVIATGLALGLSFGAQAGTLEDVQKRGSVSCGVSTGLAGFSQKDENGTWSGLDVDVCR 80 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++++A+ D SK+QY PL AKERF ALQS +IDILSRNT WT R+ SLGL F + Y+D Sbjct: 81 SVAAAVLGDASKVQYKPLTAKERFTALQSGEIDILSRNTTWTHTRDTSLGLNFAGVNYYD 140 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 GQGF++ K G+SS L GA++C+QAGTTTEL LADYF+A+ + Y+ I F+ ++ A Sbjct: 141 GQGFMVSKDLGVSSALDLDGAAVCIQAGTTTELNLADYFRANGITYNAITFDTSDQTRAG 200 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + + RCD T D S LYAL++ PS ++LP++ISK PL P + QGD +W+NIV W+ Sbjct: 201 FESGRCDVLTSDQSQLYALRIGLKDPSSAMVLPEVISKEPLGPVVRQGDDQWFNIVKWSV 260 Query: 246 YAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGN 305 YAMV AE +GI N +Q +K NP QR +G+D S GE +G++ DW Y I++ +GN Sbjct: 261 YAMVEAEFMGINSANADQ-AKSQGNPGQQRLMGVDTDS--GEKMGISNDWAYNIVKQVGN 317 Query: 306 YGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 YGE F+RN+G S LKI RG NA W+KGG+MY+ P+R Sbjct: 318 YGESFERNVGQGSPLKISRGLNAQWNKGGIMYSSPVR 354 >gi|254504024|ref|ZP_05116175.1| lysine-arginine-ornithine-binding periplasmic protein [Labrenzia alexandrii DFL-11] gi|222440095|gb|EEE46774.1| lysine-arginine-ornithine-binding periplasmic protein [Labrenzia alexandrii DFL-11] Length = 325 Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust. Identities = 163/316 (51%), Positives = 228/316 (72%), Gaps = 3/316 (0%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L D+K +GF++CG++ GL GF+ A G+W G DVD CRA+++A+F D S +++ PL+AK Sbjct: 13 LEDVKGKGFIQCGVSQGLPGFSNPDAQGNWTGLDVDLCRAMAAAVFGDASAVKFTPLSAK 72 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 ERF ALQS ++D+LSRNT WT+ R+ LGL F + Y+DGQGF++ K G++S ++SGA Sbjct: 73 ERFTALQSGEVDVLSRNTTWTMSRDTQLGLNFAGVNYYDGQGFMVRKDLGVTSALEMSGA 132 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 S+C GTTTEL +ADYF+A+NM Y + FE+ +E+ AAY A RCD YT D S LYA +L Sbjct: 133 SVCTNTGTTTELNVADYFRANNMPYEIVAFEKADEVVAAYDAGRCDVYTTDASGLYAQRL 192 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 P +H++LP+IISK PL P + QGD EW+NI WT AM+ AEELG+T N++++ K Sbjct: 193 KLTNPGDHMVLPEIISKEPLGPVVRQGDDEWFNIAKWTLNAMINAEELGVTSANVDEM-K 251 Query: 267 DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGY 326 + NP V+R LG + + GEA+GL+ DW Y I++++GNY E F+ N+G + L I RG Sbjct: 252 ASDNPSVKRLLGAEGA--FGEAIGLSNDWAYNIVKNVGNYEESFNANVGPDTPLGISRGV 309 Query: 327 NALWSKGGLMYAPPIR 342 NALWS GG +YAPP+R Sbjct: 310 NALWSNGGFLYAPPVR 325 >gi|89093226|ref|ZP_01166176.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Oceanospirillum sp. MED92] gi|89082522|gb|EAR61744.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Oceanospirillum sp. MED92] Length = 337 Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust. Identities = 168/337 (49%), Positives = 230/337 (68%), Gaps = 3/337 (0%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 S++ + SF A L D++KRG + CG++TGL GF++ NG W G DVD CR Sbjct: 4 LTSVIATGLALGLSFGAQAGTLEDVQKRGSVSCGVSTGLAGFSQKDENGTWSGLDVDVCR 63 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++++A+ D SK+QY PL AKERF ALQS +IDILSRNT WT R+ SLGL F + Y+D Sbjct: 64 SVAAAVLGDASKVQYKPLTAKERFTALQSGEIDILSRNTTWTHTRDTSLGLNFAGVNYYD 123 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 GQGF++ K G+SS L GA++C+QAGTTTEL LADYF+A+ + Y+ I F+ ++ A Sbjct: 124 GQGFMVSKDLGVSSALDLDGAAVCIQAGTTTELNLADYFRANGITYNAITFDTSDQTRAG 183 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + + RCD T D S LYAL++ PS ++LP++ISK PL P + QGD +W+NIV W+ Sbjct: 184 FESGRCDVLTSDQSQLYALRIGLKDPSSAMVLPEVISKEPLGPVVRQGDDQWFNIVKWSV 243 Query: 246 YAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGN 305 YAMV AE +GI N +Q +K NP QR +G+D S GE +G++ DW Y I++ +GN Sbjct: 244 YAMVEAEFMGINSANADQ-AKSQGNPGQQRLMGVDTDS--GEKMGISNDWAYNIVKQVGN 300 Query: 306 YGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 YGE F+RN+G S LKI RG NA W+KGG+MY+ P+R Sbjct: 301 YGESFERNVGQGSPLKISRGLNAQWNKGGIMYSSPVR 337 >gi|75677073|ref|YP_319494.1| extracellular solute-binding protein [Nitrobacter winogradskyi Nb-255] gi|74421943|gb|ABA06142.1| amino acid ABC transporter substrate-binding protein, PAAT family [Nitrobacter winogradskyi Nb-255] Length = 345 Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust. Identities = 167/311 (53%), Positives = 225/311 (72%), Gaps = 3/311 (0%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 +R + CG+NTGL GF+ G+W GFDVDFCRA+++AIFDDPSK++++PL A ERF Sbjct: 38 RRDAVLCGVNTGLPGFSSSDEKGNWSGFDVDFCRAVAAAIFDDPSKVKFVPLAADERFKE 97 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151 LQS+++DIL+RN+ W++ RE + L F + Y+DG+GF++ + S L ICVQ Sbjct: 98 LQSRKVDILARNSTWSMSRETNFNLYFPAVAYYDGEGFMVRTSRKADSALDLGDTKICVQ 157 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 + TTT+L LADYF+A+N+KY I FE++E++ AY RCD T D+S LYAL+L +P Sbjct: 158 SATTTQLNLADYFRANNLKYEEIRFEKLEDVLRAYDEARCDVVTADVSQLYALRLRLTKP 217 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 +E ILPD+ISK PLAP + Q D +W I+ WT YAM+ AEELG+T KNI++ K +T P Sbjct: 218 NESFILPDVISKEPLAPVVRQRDDDWMMIIKWTLYAMINAEELGVTSKNIDEAMK-STKP 276 Query: 272 DVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWS 331 DV R +G + GEALGLTKDW RIIRH+GNYGE++DRN+G +S LKIPRG N W+ Sbjct: 277 DVMRLVGTE--GQYGEALGLTKDWAARIIRHVGNYGEVYDRNIGTESRLKIPRGLNQPWN 334 Query: 332 KGGLMYAPPIR 342 GG+MYAPP+R Sbjct: 335 AGGIMYAPPLR 345 >gi|126668363|ref|ZP_01739321.1| Lysine-arginine-ornithine-binding periplasmic protein [Marinobacter sp. ELB17] gi|126627179|gb|EAZ97818.1| Lysine-arginine-ornithine-binding periplasmic protein [Marinobacter sp. ELB17] Length = 340 Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust. Identities = 170/338 (50%), Positives = 236/338 (69%), Gaps = 3/338 (0%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 V+I + + S A+ L D+K RG ++CG+ +GL GF++ NG+W G DVD C Sbjct: 6 LLVAIATTLGGTLMAGSVQAATLDDVKSRGHVQCGVTSGLPGFSQPDENGNWTGIDVDTC 65 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 RA+++A+F K+Q+ PL AKERF ALQS +IDILSRNT WTL R+ SLGL F Y+ Sbjct: 66 RAVAAAVFGSADKVQFTPLTAKERFTALQSGEIDILSRNTTWTLTRDASLGLNFAGTNYY 125 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 DGQGF++ K G+ + QL GA+IC+QAGTTTEL LADYF+ MK++P+VF+ E+ + Sbjct: 126 DGQGFLVSKSLGVDNAEQLDGATICIQAGTTTELNLADYFRTKGMKFNPLVFDTSEQTVS 185 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + A RCD T D S L AL+ + PS VILP+IISK PL P + QGD +W+NIV WT Sbjct: 186 GFAAGRCDVLTSDRSQLAALRSKLEDPSSAVILPNIISKEPLGPVVRQGDDQWFNIVKWT 245 Query: 245 HYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMG 304 + + AEELG+TQ N++ + K +TNP++QR LG + ++GE LG+ D+ +RII+ +G Sbjct: 246 LFVQINAEELGVTQANVSDM-KSSTNPEIQRLLGT--TGDMGEKLGVPADFGFRIIQTVG 302 Query: 305 NYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 NYGEM++RN+G + L + RG NALW+ GG+MYAPP+R Sbjct: 303 NYGEMYERNVGPDTPLGLDRGLNALWNNGGIMYAPPVR 340 >gi|92119138|ref|YP_578867.1| extracellular solute-binding protein [Nitrobacter hamburgensis X14] gi|91802032|gb|ABE64407.1| amino acid ABC transporter substrate-binding protein, PAAT family [Nitrobacter hamburgensis X14] Length = 345 Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust. Identities = 168/311 (54%), Positives = 227/311 (72%), Gaps = 3/311 (0%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 +R + CG+NTGL GF+ V G+W GFDVDFCRA+++AIFDDP+K++++PL A ERF Sbjct: 38 RRDAVLCGVNTGLPGFSNVDEKGNWSGFDVDFCRAVAAAIFDDPAKVKFVPLAADERFKE 97 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151 LQS+++DIL+RN+ W++ RE + L F + Y+DG+GF++ + +S L G ICVQ Sbjct: 98 LQSRKVDILARNSTWSMSRETNFDLYFPAVAYYDGEGFMVRTSRKAASALDLGGTKICVQ 157 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 GTTT+L LADYFKA+N+ Y I F ++E++ AY +CD T D++ LYA++L +P Sbjct: 158 DGTTTKLNLADYFKANNLTYEEIKFGKLEDMLKAYDEAKCDVVTSDVAQLYAMRLRLTKP 217 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 SE ILPD+ISK PLAP + Q D +W IV WT YAMV AEELG+T KNI++ K + P Sbjct: 218 SESFILPDVISKEPLAPVVRQRDDDWMMIVKWTLYAMVNAEELGVTSKNIDEAMK-SKKP 276 Query: 272 DVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWS 331 DV R +G + + GEALGLTKDW RIIRH+GNYGE++DRN+G S+LKIPRG N LW+ Sbjct: 277 DVMRLVGTEGA--YGEALGLTKDWAARIIRHVGNYGEVYDRNVGADSKLKIPRGLNQLWN 334 Query: 332 KGGLMYAPPIR 342 GG+MYAPP+R Sbjct: 335 AGGIMYAPPLR 345 >gi|262404012|ref|ZP_06080567.1| amino acid ABC transporter amino acid-binding protein [Vibrio sp. RC586] gi|262349044|gb|EEY98182.1| amino acid ABC transporter amino acid-binding protein [Vibrio sp. RC586] Length = 342 Score = 371 bits (953), Expect = e-101, Method: Compositional matrix adjust. Identities = 169/328 (51%), Positives = 231/328 (70%), Gaps = 3/328 (0%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 L S S S L + +GF+ CG++TGL GF+ A GDW+G DV++C+AL++A+ D Sbjct: 18 LMTYSASAAESTLDKVLSQGFITCGVSTGLPGFSNPNAKGDWEGIDVEYCQALAAAVLGD 77 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 +K++++PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F + Y+DGQGF++ K Sbjct: 78 KTKVKFVPLTAKERFTALQSGEIDVLSRNTTWTLQRDSALGLNFVGVNYYDGQGFMVKKD 137 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 GI S +L GAS+CVQ+GTTTEL LADYF+ + MKY P+VF+ + + A RCD Sbjct: 138 LGIKSAKELDGASVCVQSGTTTELNLADYFRNNGMKYKPVVFDTSAQTSKGFDAGRCDVL 197 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 T D S LYAL+L ++P V+LP+IISK PL P + Q D +W+N+ W YAMV AEE Sbjct: 198 TTDQSGLYALRLNLEKPDAAVVLPEIISKEPLGPVVRQDDDKWFNVAKWVLYAMVNAEEY 257 Query: 255 GITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNL 314 GIT KN++++ K + NP+V+R LG+D G LG+ DW+Y+I++ +GNYGE F+R + Sbjct: 258 GITSKNVDEMMK-SENPEVKRILGLDGPKGTG--LGIRDDWSYQIVKQVGNYGESFERTV 314 Query: 315 GNQSELKIPRGYNALWSKGGLMYAPPIR 342 G+ S LKI RG NALW+ GG MYAPPIR Sbjct: 315 GSGSPLKIDRGVNALWNAGGFMYAPPIR 342 >gi|330446205|ref|ZP_08309857.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328490396|dbj|GAA04354.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 342 Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust. Identities = 163/337 (48%), Positives = 237/337 (70%), Gaps = 3/337 (0%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 F ++ LF + + A+ L + K+G+++CG++ GL GF+ A G W+G DV+FC+ Sbjct: 9 FAALASSTALFAANVNAEAT-LDKVMKQGYVQCGVSAGLPGFSNPNAKGQWEGLDVEFCQ 67 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 A+++A D SK++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F + Y+D Sbjct: 68 AIAAATIGDKSKVKYIPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFTGVNYYD 127 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 GQGF++ K GI S +L GA++CVQ+GTTTEL LADYF+ + M+Y P+VF+ + Sbjct: 128 GQGFMVKKDMGIKSAKELDGAAVCVQSGTTTELNLADYFRVNGMEYKPVVFDTAPQTSKG 187 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + + RCD T D S LYAL+L P+ V+LP+IISK PL P + QGD +W+NIV WT Sbjct: 188 FDSGRCDVLTTDQSGLYALRLNLKDPNSAVVLPEIISKEPLGPVVRQGDDQWFNIVRWTL 247 Query: 246 YAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGN 305 + M+ AEE G+T N+++++K++ +P+++R +G+D G+ LGL DW Y+II+ +GN Sbjct: 248 FTMINAEEFGVTAANVDKLAKESKDPNIRRLIGLDGPK--GKGLGLKDDWGYQIIKQVGN 305 Query: 306 YGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 YGE F+R +G S LKI RG NALW++GG+ YAPPIR Sbjct: 306 YGESFERTVGEGSPLKIKRGLNALWTQGGIQYAPPIR 342 >gi|312115908|ref|YP_004013504.1| extracellular solute-binding protein family 3 [Rhodomicrobium vannielii ATCC 17100] gi|311221037|gb|ADP72405.1| extracellular solute-binding protein family 3 [Rhodomicrobium vannielii ATCC 17100] Length = 338 Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust. Identities = 164/337 (48%), Positives = 234/337 (69%), Gaps = 2/337 (0%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 + ++ C + L A L D+K RG L CG+ GL GF+ A+G+W G DVDFCR Sbjct: 4 YGTLYCALALMLFCAGARAGTLDDVKARGKLNCGVTQGLAGFSSADASGNWAGLDVDFCR 63 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 A+++AIFDDPSK+ ++PL++K+RF ALQS +ID+LSR + WT+ + +LG++F + Y D Sbjct: 64 AVAAAIFDDPSKVNFVPLSSKQRFTALQSGEIDVLSRVSTWTMQNDTALGISFVGVIYHD 123 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 GQG ++ KK + S +LSGA +C GTTTEL +AD+F++ +M Y + FE+ +E A Sbjct: 124 GQGLMVRKKLEVQSALELSGAEVCTNTGTTTELNIADFFRSRSMPYRIVAFEKSDEALKA 183 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 Y A RCD Y+ D S+L A ++ +P EHVILPD+ISK PLAPA+ Q D +W ++V WT Sbjct: 184 YEAERCDVYSTDASSLSAQRVKLAQPDEHVILPDLISKEPLAPAVRQNDPQWESLVRWTL 243 Query: 246 YAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGN 305 +A++ AEEL +T+ N +++S+ P V+R LG + S+ G ALGL KDW + IR +GN Sbjct: 244 FALINAEELAVTKANADKLSRTDAAPGVRRLLGAE--SDYGRALGLDKDWALKAIRAVGN 301 Query: 306 YGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 YGE+FDRNLG QS LKI RG N LW+ GG+++APP+R Sbjct: 302 YGEIFDRNLGQQSPLKIERGLNKLWNNGGILFAPPVR 338 >gi|260768536|ref|ZP_05877470.1| amino acid ABC transporter amino acid-binding protein [Vibrio furnissii CIP 102972] gi|260616566|gb|EEX41751.1| amino acid ABC transporter amino acid-binding protein [Vibrio furnissii CIP 102972] gi|315180248|gb|ADT87162.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio furnissii NCTC 11218] Length = 342 Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust. Identities = 169/328 (51%), Positives = 230/328 (70%), Gaps = 3/328 (0%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 L S S S L + +GFL CG++TGL GF+ A G+W+G DV++C+AL++A+ D Sbjct: 18 LMANSASAADSTLDKVLSQGFLTCGVSTGLPGFSNPNAKGEWEGIDVEYCQALAAAVLGD 77 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F + Y+DGQGF++ K Sbjct: 78 KTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDSALGLNFVGVNYYDGQGFMVKKD 137 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 GISS +L GAS+CVQ+GTTTEL LADYF+ + M Y P+VF+ + + A RCD Sbjct: 138 LGISSAKELDGASVCVQSGTTTELNLADYFRNNGMSYKPVVFDTAAQTSKGFDAGRCDVL 197 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 T D S LYAL+L ++P V+LP+IISK PL P + Q D +W+N+ WT +AMV AEE Sbjct: 198 TTDQSGLYALRLNLEKPDSAVVLPEIISKEPLGPVVRQDDDKWFNVAKWTLFAMVNAEEY 257 Query: 255 GITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNL 314 GIT KN +++ K + NP+V+R LG+D G+ LG+ DW Y+I++ +GNYGE F+R + Sbjct: 258 GITSKNADEMLK-SDNPEVKRILGVDGPK--GKGLGIRDDWGYQIVKQVGNYGESFERTV 314 Query: 315 GNQSELKIPRGYNALWSKGGLMYAPPIR 342 G S L+I RG NALW+ GG MYAPPIR Sbjct: 315 GKGSPLQISRGVNALWNAGGFMYAPPIR 342 >gi|115524735|ref|YP_781646.1| cationic amino acid ABC transporter, periplasmic binding protein [Rhodopseudomonas palustris BisA53] gi|115518682|gb|ABJ06666.1| cationic amino acid ABC transporter, periplasmic binding protein [Rhodopseudomonas palustris BisA53] Length = 337 Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust. Identities = 166/316 (52%), Positives = 228/316 (72%), Gaps = 3/316 (0%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L I+ RG L CG++ GL GF+ G+W G DVD CRA+++A+F+DP+K++++PL+AK Sbjct: 25 LKTIQDRGVLSCGVSQGLPGFSTPDDKGNWTGLDVDICRAIAAAVFNDPTKVKFVPLSAK 84 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 +RF ALQS +ID+LSRNT WT+ R+ SLG+ F +TY+DGQGF++ K ++S +L+GA Sbjct: 85 DRFTALQSGEIDVLSRNTTWTISRDTSLGVNFTGVTYYDGQGFLVKKALKVNSALELNGA 144 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 SICVQ GTT E +ADYFK +NMKY I F +E AY A RCD +T D+S LYAL+L Sbjct: 145 SICVQTGTTNEQNVADYFKGNNMKYEVIAFSTADEALKAYEAGRCDVFTSDVSQLYALRL 204 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 ++H +LP++ISK PL P + GD +W++IV WT +AM+ AEE G+TQKN+ +K Sbjct: 205 KLAAVADHAVLPEVISKEPLGPLVRHGDDQWFDIVKWTLFAMINAEEFGVTQKNVEDQAK 264 Query: 267 DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGY 326 PD++R G D N+GE LGLTKDW RI++ GNYGE+F+RN+G+ S+L I RG Sbjct: 265 -LDKPDLKRMFGTD--GNLGEQLGLTKDWVIRIVKATGNYGEVFERNVGSGSKLGIARGL 321 Query: 327 NALWSKGGLMYAPPIR 342 N LW+KGG+ YAPPIR Sbjct: 322 NQLWNKGGIQYAPPIR 337 >gi|27379557|ref|NP_771086.1| ABC transporter amino acid-binding protein [Bradyrhizobium japonicum USDA 110] gi|27352709|dbj|BAC49711.1| ABC transporter amino acid-binding protein [Bradyrhizobium japonicum USDA 110] Length = 338 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 171/320 (53%), Positives = 231/320 (72%), Gaps = 3/320 (0%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 +A L +K RG L CG++ GL GF+ G+W G DVD CRA+++AIF+DP+K++++P Sbjct: 22 DAQTLKTVKDRGTLSCGVSQGLPGFSAPDDKGNWTGLDVDVCRAIAAAIFNDPTKVKFVP 81 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 +AK+RF ALQS +ID+LSRNT WT+ R+ SLG F +TY+DGQGF++ K ++S + Sbjct: 82 TSAKDRFTALQSGEIDVLSRNTTWTISRDTSLGANFTGVTYYDGQGFMVKKSLKVNSALE 141 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+ AS+CVQ GTTTE LADYFKA+NMKY I F +E AY A RCD +T D S LY Sbjct: 142 LNSASVCVQTGTTTEQNLADYFKANNMKYEVIAFGTNDETVKAYEAGRCDVFTTDQSGLY 201 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 A +L P++H++LP+IISK PL P + GD +W++IV WT +A+VT EELG+T KN++ Sbjct: 202 ANRLKLANPNDHMVLPEIISKEPLGPMVRHGDDQWFDIVKWTLFALVTTEELGVTSKNVD 261 Query: 263 QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKI 322 + +K +P+++R LG D N GE LGLTKDW RI++ +GNYGE+FDRN+G S L I Sbjct: 262 EKAK-LESPELKRVLGSD--GNFGEQLGLTKDWVVRIVKAVGNYGEVFDRNVGAGSPLAI 318 Query: 323 PRGYNALWSKGGLMYAPPIR 342 RG N LW+KGGL YAPPIR Sbjct: 319 NRGLNNLWNKGGLQYAPPIR 338 >gi|90424048|ref|YP_532418.1| lysine-arginine-ornithine-binding periplasmic protein [Rhodopseudomonas palustris BisB18] gi|90106062|gb|ABD88099.1| Lysine-arginine-ornithine-binding periplasmic protein [Rhodopseudomonas palustris BisB18] Length = 350 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 165/326 (50%), Positives = 232/326 (71%), Gaps = 3/326 (0%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 F + + A L ++ RG L CG++ GL GF+ G+W G DVD CRA+++A+F+DP+ Sbjct: 28 FLTQAAGAQTLKTVQDRGVLSCGVSQGLPGFSAPDDKGNWTGIDVDVCRAIAAAVFNDPT 87 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 K++++PL+AK+RF ALQS +ID+LSRNT WT+ R+ SLG+ F +TY+DGQGF++ K Sbjct: 88 KVKFVPLSAKDRFTALQSGEIDVLSRNTTWTVSRDTSLGVNFTGVTYYDGQGFLVRKALK 147 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 ++S +L+ ASICVQ GTT E +ADYFK +NMKY I F +E AY + RCD +T Sbjct: 148 VNSALELNSASICVQTGTTNEQNVADYFKGNNMKYEVIAFGTADEAVKAYESGRCDVFTS 207 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 D+S LYAL+L P++H +LP++ISK PL P + GD +W++IV WT +A++ AEELG+ Sbjct: 208 DVSQLYALRLKLATPADHAVLPEVISKEPLGPLVRHGDDQWFDIVKWTLFALLNAEELGV 267 Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316 QKN++ +K P+++R G D N+GE LGLTKDW RI++ GNYGE+FDRN+G Sbjct: 268 NQKNVDDQAK-LDKPELKRVFGTD--GNLGEQLGLTKDWVIRIVKATGNYGEIFDRNVGA 324 Query: 317 QSELKIPRGYNALWSKGGLMYAPPIR 342 S+L I RG N LW+KGG+ YAPPIR Sbjct: 325 GSKLGIARGLNQLWNKGGIQYAPPIR 350 >gi|261210913|ref|ZP_05925203.1| amino acid ABC transporter amino acid-binding protein [Vibrio sp. RC341] gi|260839888|gb|EEX66488.1| amino acid ABC transporter amino acid-binding protein [Vibrio sp. RC341] Length = 342 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 165/318 (51%), Positives = 227/318 (71%), Gaps = 3/318 (0%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L + +GF+ CG++TGL GF+ A GDW+G DV++C+AL++A+ D +K++++PL Sbjct: 28 STLDKVLSQGFITCGVSTGLPGFSNPNAKGDWEGIDVEYCQALAAAVLGDKTKVKFVPLT 87 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 AKERF ALQS +ID+LSRNT WTL R+ +LGL F + Y+DGQGF++ K G+ S +L Sbjct: 88 AKERFTALQSGEIDVLSRNTTWTLQRDSALGLNFVGVNYYDGQGFMVKKDLGVKSAKELD 147 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 GAS+CVQ+GTTTEL LADYF+ MKY P+VF+ + + A RCD T D S LYAL Sbjct: 148 GASVCVQSGTTTELNLADYFRNSGMKYKPVVFDTAAQTSKGFDAGRCDVLTTDQSGLYAL 207 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 +L ++P V+LP+IISK PL P + Q D +W+N+ WT YAMV AEE GIT KN++++ Sbjct: 208 RLNLEKPDSAVVLPEIISKEPLGPVVRQDDDKWFNVAKWTLYAMVNAEEYGITSKNVDEM 267 Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324 K + NP+V+R LG+D G LG+ DW+Y+I++ +GNYGE F+R +G S L+I R Sbjct: 268 MK-SENPEVKRILGLDGPK--GTGLGIRDDWSYQIVKQVGNYGESFERTVGKGSPLQIDR 324 Query: 325 GYNALWSKGGLMYAPPIR 342 G NALW+ GG MYAPPIR Sbjct: 325 GVNALWNAGGFMYAPPIR 342 >gi|85716216|ref|ZP_01047190.1| extracellular solute-binding protein, family 3 [Nitrobacter sp. Nb-311A] gi|85696888|gb|EAQ34772.1| extracellular solute-binding protein, family 3 [Nitrobacter sp. Nb-311A] Length = 344 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 166/313 (53%), Positives = 229/313 (73%), Gaps = 3/313 (0%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 +K+RG L CG+ GL GF+ G+W G DVD CRA+++ +F+DPSK++++PL+AK+RF Sbjct: 35 VKERGVLSCGVTQGLPGFSTPDDKGNWTGLDVDICRAIAAVVFNDPSKVKFVPLSAKDRF 94 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 +ALQ +ID+LSR+T WTL R+ SLG F +TY+DGQGF++ K ++S +L+ AS+C Sbjct: 95 IALQWGEIDVLSRDTSWTLSRDTSLGGNFTGVTYYDGQGFLVRKSLKVNSALELNSASVC 154 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 VQ GTT+E LADYFK++ MKY I F +E AY + RCD +T DIS LYA +L Sbjct: 155 VQTGTTSEQNLADYFKSNKMKYEVIAFGTADETLKAYESGRCDVFTSDISQLYAQRLKLL 214 Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 P++H +LP++ISK PL P + QGD +W++IV WT +AM+ AEELGITQKN+++ +K + Sbjct: 215 NPADHAVLPEVISKEPLGPMVRQGDDQWFDIVKWTLFAMINAEELGITQKNVDEKAK-SE 273 Query: 270 NPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNAL 329 NP+++R LG D N GE LG+TKDW RII+ +GNYGE FDRN+G S L I RG N L Sbjct: 274 NPEIKRVLGTD--GNFGEQLGVTKDWVSRIIKAVGNYGEAFDRNVGAGSPLGITRGLNRL 331 Query: 330 WSKGGLMYAPPIR 342 W++GG+ YAPPIR Sbjct: 332 WNQGGIQYAPPIR 344 >gi|260778552|ref|ZP_05887444.1| amino acid ABC transporter amino acid-binding protein [Vibrio coralliilyticus ATCC BAA-450] gi|260604716|gb|EEX31011.1| amino acid ABC transporter amino acid-binding protein [Vibrio coralliilyticus ATCC BAA-450] Length = 342 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 170/328 (51%), Positives = 229/328 (69%), Gaps = 3/328 (0%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 L TS S S L + K+GFL CG++TGL GF+ + G+W+G DV++C+AL+SA+ D Sbjct: 18 LMSTSASAADSTLDKVTKQGFLTCGVSTGLPGFSNPNSKGEWEGIDVEYCQALASAVLGD 77 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 SK++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F + Y+DGQGF++ K Sbjct: 78 KSKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVGVNYYDGQGFMVKKD 137 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 G+ S +L GAS+CVQ+GTTTEL LADYF+ + M Y P+VF+ + + A RCD Sbjct: 138 LGLKSAKELDGASVCVQSGTTTELNLADYFRNNGMSYKPVVFDTAAQTSKGFDAGRCDVL 197 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 T D S LYAL+L PS +LP+IISK PL P + QGD +W+NI WT AMV AEE Sbjct: 198 TTDQSGLYALRLNLQDPSSAEVLPEIISKEPLGPVVRQGDDQWFNIAKWTLSAMVNAEEY 257 Query: 255 GITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNL 314 GI+ KN +++ K + +P+V+R LG+D G+ LG+ DW Y++I+ +GNYGE F+R + Sbjct: 258 GISSKNADEMLK-SKDPNVKRILGVDGPK--GKGLGIRDDWGYQVIKQVGNYGESFERTV 314 Query: 315 GNQSELKIPRGYNALWSKGGLMYAPPIR 342 G S L+I RG NALW+ GG MYAPPIR Sbjct: 315 GKGSPLQISRGVNALWNAGGFMYAPPIR 342 >gi|271498820|ref|YP_003331845.1| family 3 extracellular solute-binding protein [Dickeya dadantii Ech586] gi|270342375|gb|ACZ75140.1| extracellular solute-binding protein family 3 [Dickeya dadantii Ech586] Length = 343 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 167/343 (48%), Positives = 237/343 (69%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILF-FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K +++ LF F + + + L I+K+GF++CGI+ GL GF+ ANG + G Sbjct: 3 MKKVIMSTLVASASLFAFINQAHAGATLDAIQKKGFVQCGISDGLPGFSYADANGKYSGI 62 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++AIF D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ S+GL F Sbjct: 63 DVDVCRGVAAAIFGDANKVKYTPLTAKERFTALQSGEVDVLSRNTTWTSSRDGSMGLLFT 122 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFK HNMKY P+ F+R Sbjct: 123 GVTYYDGIGFLAHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKTHNMKYTPVTFDRS 182 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ +P++ V+LP++ISK PL P + +GD +W+ Sbjct: 183 DESAKALDSGRCDTLASDQSQLYALRIKLGKPADFVVLPEVISKEPLGPVVRRGDEDWFA 242 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+G+T +N++Q++ T PD+ LG K N G+ L L DW Y+I Sbjct: 243 IVRWTLFAMLDAEEMGVTSQNVDQMAAKPTTPDMAHLLG--KEGNFGKDLKLPNDWAYKI 300 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++ +GNYGE+F+RN+G SELKI RG N LW+KGG+ YAP +R Sbjct: 301 VKQVGNYGEVFERNVGQGSELKIKRGLNELWNKGGIQYAPAVR 343 >gi|296272121|ref|YP_003654752.1| cationic amino acid ABC transporter periplasmic binding protein [Arcobacter nitrofigilis DSM 7299] gi|296096296|gb|ADG92246.1| cationic amino acid ABC transporter, periplasmic binding protein [Arcobacter nitrofigilis DSM 7299] Length = 338 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 172/333 (51%), Positives = 227/333 (68%), Gaps = 3/333 (0%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 L + L S ++A L K G L CG+NTGL GFA ++G WKG DVD CRA+++ Sbjct: 9 LSIAALAIASTVSSADTLDTTIKNGKLSCGLNTGLPGFAAPDSDGVWKGIDVDVCRAVAA 68 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 A+ D +K++Y LNAKERF ALQS +ID+L+RNT WT R+ SLGL F + Y+DGQGF Sbjct: 69 AVLGDATKVKYAHLNAKERFTALQSGEIDVLARNTTWTATRDTSLGLNFTGVNYYDGQGF 128 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 ++ KK G+ S +L GA+ C+QAGTTTEL L DYFK+HNMKY PI ++ + + Sbjct: 129 LVSKKLGVKSAKELDGATFCIQAGTTTELNLTDYFKSHNMKYTPITYDTSAQTIQGFEEG 188 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 RCDA T D S LYAL+ PS ++LP+IISK PL P + QGD +W+NIV WT AM+ Sbjct: 189 RCDALTSDSSQLYALRTQLKNPSSAIVLPEIISKEPLGPVVRQGDDKWFNIVKWTEIAML 248 Query: 250 TAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEM 309 AE+LG+ KN++++ K +TNP++QR LG+ + +IG+ LGL W Y II+ +GNYGE Sbjct: 249 NAEDLGVNSKNVDEMLK-STNPNIQRLLGV--TGDIGKNLGLDPKWAYNIIKQVGNYGES 305 Query: 310 FDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 F+RN+G S LKI RG NALW GGL Y PIR Sbjct: 306 FERNVGQGSPLKIERGLNALWKNGGLQYGAPIR 338 >gi|298291387|ref|YP_003693326.1| cationic amino acid ABC transporter periplasmic protein [Starkeya novella DSM 506] gi|296927898|gb|ADH88707.1| cationic amino acid ABC transporter, periplasmic binding protein [Starkeya novella DSM 506] Length = 339 Score = 369 bits (946), Expect = e-100, Method: Compositional matrix adjust. Identities = 167/326 (51%), Positives = 231/326 (70%), Gaps = 6/326 (1%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 + S A+ L +K +GF++CG++ GL GF+ G+W G DVDFCRA+++A+F+DP+K+ Sbjct: 18 AVSAQAAKLDQVKSKGFIQCGVSQGLPGFSTPDDKGNWTGLDVDFCRAVAAAVFNDPTKV 77 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 ++ PL+AK+RF ALQS IDILSRNT WT+ R+ SLGL F +TY+DGQGF++ K K ++ Sbjct: 78 KFTPLSAKDRFTALQSGDIDILSRNTTWTITRDTSLGLNFTGVTYYDGQGFMIRKDKKVN 137 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 S +LSGAS+C Q GTTTE LADYF+A+NM Y I F +E+ AY A RCD T D Sbjct: 138 SALELSGASVCTQTGTTTEQNLADYFRANNMTYEVIAFATNDEVVKAYDAGRCDVLTTDR 197 Query: 199 SALYA--LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 S L LKLTN P +HV+LP+IISK PL P + GD +W++IV W +A + AEELG+ Sbjct: 198 SGLAGERLKLTN--PDDHVVLPEIISKEPLGPVVAHGDDQWFDIVKWVLFAQINAEELGV 255 Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316 T KN+++ K TNP+++R +G + GE +G+ DW Y++I+ +GNYGEM+DRN+G Sbjct: 256 TSKNVDEQLKSATNPEIKRLVGTE--GKFGEGMGIGNDWAYQVIKGVGNYGEMYDRNVGP 313 Query: 317 QSELKIPRGYNALWSKGGLMYAPPIR 342 + LK+ RG NALW+KGG Y PIR Sbjct: 314 ATPLKLERGANALWTKGGQQYGMPIR 339 >gi|89073072|ref|ZP_01159619.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Photobacterium sp. SKA34] gi|89051290|gb|EAR56746.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Photobacterium sp. SKA34] Length = 342 Score = 369 bits (946), Expect = e-100, Method: Compositional matrix adjust. Identities = 163/337 (48%), Positives = 235/337 (69%), Gaps = 3/337 (0%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 F ++ LF + + A+ L + K+G+++CG++ GL GF+ A G W+G DV+FC+ Sbjct: 9 FAALASSTALFAANANAEAT-LDKVMKQGYVQCGVSAGLPGFSNPNAKGQWEGLDVEFCQ 67 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 A+++A D SK++Y+PL AKERF ALQS +ID+LSRNT WTL R+ SLGL F + Y+D Sbjct: 68 AIAAATIGDKSKVKYIPLTAKERFTALQSGEIDVLSRNTTWTLHRDTSLGLNFTGVNYYD 127 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 GQGF++ K GI+S +L GA++CVQ+GTTTEL LADYF+ + M Y P+VF+ + Sbjct: 128 GQGFMVKKDMGITSAKELDGAAVCVQSGTTTELNLADYFRVNGMTYKPVVFDTAPQTSKG 187 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + + RCD T D S LYAL+L PS V+LP+IISK PL P + QGD +W+N+V WT Sbjct: 188 FDSGRCDVLTTDQSGLYALRLNLKDPSSAVVLPEIISKEPLGPVVRQGDDQWFNVVRWTL 247 Query: 246 YAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGN 305 + M+ AEE +T N+++++K++ +P+++R +G+D G+ LGL DW Y+II+ +GN Sbjct: 248 FTMINAEEFNVTSANVDKLAKESKDPNIRRLIGLDGPK--GKGLGLKDDWGYQIIKQVGN 305 Query: 306 YGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 YGE F+R +G S LKI RG NALW+ GG+ YAPPIR Sbjct: 306 YGESFERTVGEGSPLKIKRGLNALWTNGGIQYAPPIR 342 >gi|114706424|ref|ZP_01439326.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Fulvimarina pelagi HTCC2506] gi|114538285|gb|EAU41407.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Fulvimarina pelagi HTCC2506] Length = 339 Score = 369 bits (946), Expect = e-100, Method: Compositional matrix adjust. Identities = 168/342 (49%), Positives = 238/342 (69%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M F + L L + + A G +K+RG L+CG+NTGL GFA G+W+G D Sbjct: 1 MTIKFLTAALGLSVAALATAGAQAQTAGTVKERGSLRCGVNTGLPGFASQNDQGEWQGLD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+CRA+++A+ DP + + PL+A +RF ALQ+ +ID+L+RNT WT+ R+ +LGL F Sbjct: 61 VDYCRAVATAVLGDPQAVTFSPLSAVQRFPALQNNEIDLLARNTTWTMDRDTALGLDFAG 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ G++S +LSGA++CVQ+GTTTEL LADYF+A++M Y+P+V E Sbjct: 121 VNYYDGQGFMVKNDLGVNSALELSGATVCVQSGTTTELNLADYFEANDMDYNPVVIESQS 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 ++++AY + RCD T D S L A +L P H ILP+IISK PL PA+ QGD +W +I Sbjct: 181 DVNSAYDSGRCDVLTTDASGLAASRLEMSNPDNHTILPEIISKEPLGPAVRQGDDQWADI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WTHYA++ AEELG+ Q N+ ++ K++ NPD++R LG D SN GE LGL +DW ++I Sbjct: 241 VRWTHYALLNAEELGVNQGNVEEM-KNSDNPDIRRLLGQD--SNFGEPLGLPQDWAAQVI 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGE+F+RN+G + LKI RG NALW+ GGL Y P+R Sbjct: 298 SAVGNYGEIFERNIGVNTPLKIQRGQNALWTDGGLQYGMPVR 339 >gi|91227965|ref|ZP_01262075.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio alginolyticus 12G01] gi|91188286|gb|EAS74584.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio alginolyticus 12G01] Length = 342 Score = 369 bits (946), Expect = e-100, Method: Compositional matrix adjust. Identities = 166/328 (50%), Positives = 230/328 (70%), Gaps = 3/328 (0%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 + TS + L + K+GFL CG++TGL GF+ + G+W+G DV++C+AL++A+ D Sbjct: 18 MMATSAQAADTTLDKVTKQGFLTCGVSTGLPGFSNPNSKGEWEGIDVEYCQALAAAVLGD 77 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F + Y+DGQGF++ K+ Sbjct: 78 KTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVGVNYYDGQGFMVKKE 137 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 GISS +L GAS+CVQ+GTTTEL LADYF+ M Y P+VF+ + + A RCD Sbjct: 138 LGISSAKELDGASVCVQSGTTTELNLADYFRNQGMAYKPVVFDTAAQTSKGFDAGRCDVL 197 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 T D S LYAL+L PS +LP+IISK PL P + QGD +W+NI WT AM+ AEE Sbjct: 198 TTDQSGLYALRLNLKDPSSAAVLPEIISKEPLGPVVRQGDDQWFNIAKWTLSAMINAEEY 257 Query: 255 GITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNL 314 GI+ KN +++ K +T+P+++R LG+D G+ LG+ DW Y++I+ +GNYGE F+R + Sbjct: 258 GISSKNADEMLK-STDPNIKRILGVDGPK--GKGLGIRDDWGYQVIKQVGNYGESFERTV 314 Query: 315 GNQSELKIPRGYNALWSKGGLMYAPPIR 342 G S L+I RG NALW+ GG MYAPPIR Sbjct: 315 GTGSPLEISRGVNALWNAGGFMYAPPIR 342 >gi|269968795|ref|ZP_06182784.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio alginolyticus 40B] gi|269826607|gb|EEZ80952.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio alginolyticus 40B] Length = 350 Score = 368 bits (945), Expect = e-100, Method: Compositional matrix adjust. Identities = 166/328 (50%), Positives = 230/328 (70%), Gaps = 3/328 (0%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 + TS + L + K+GFL CG++TGL GF+ + G+W+G DV++C+AL++A+ D Sbjct: 26 MMATSAQAADTTLDKVTKQGFLTCGVSTGLPGFSNPNSKGEWEGIDVEYCQALAAAVLGD 85 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F + Y+DGQGF++ K+ Sbjct: 86 KTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVGVNYYDGQGFMVKKE 145 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 GISS +L GAS+CVQ+GTTTEL LADYF+ M Y P+VF+ + + A RCD Sbjct: 146 LGISSAKELDGASVCVQSGTTTELNLADYFRNQGMAYKPVVFDTAAQTSKGFDAGRCDVL 205 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 T D S LYAL+L PS +LP+IISK PL P + QGD +W+NI WT AM+ AEE Sbjct: 206 TTDQSGLYALRLNLKDPSSAAVLPEIISKEPLGPVVRQGDDQWFNIAKWTLSAMINAEEY 265 Query: 255 GITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNL 314 GI+ KN +++ K +T+P+++R LG+D G+ LG+ DW Y++I+ +GNYGE F+R + Sbjct: 266 GISSKNADEMLK-STDPNIKRILGVDGPK--GKGLGIRDDWGYQVIKQVGNYGESFERTV 322 Query: 315 GNQSELKIPRGYNALWSKGGLMYAPPIR 342 G S L+I RG NALW+ GG MYAPPIR Sbjct: 323 GTGSPLEISRGVNALWNAGGFMYAPPIR 350 >gi|153835228|ref|ZP_01987895.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio harveyi HY01] gi|148868294|gb|EDL67426.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio harveyi HY01] Length = 342 Score = 368 bits (945), Expect = e-100, Method: Compositional matrix adjust. Identities = 165/328 (50%), Positives = 229/328 (69%), Gaps = 3/328 (0%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 + TS + L + K+GF+ CG++TGL GF+ + G+W+G DV++C+AL++A+ D Sbjct: 18 MMATSAQAADTTLDKVTKQGFITCGVSTGLPGFSNPNSKGEWEGIDVEYCQALAAAVLGD 77 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F + Y+DGQGF++ K Sbjct: 78 KTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVGVNYYDGQGFMVKKD 137 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 G+SS +L GAS+CVQ+GTTTEL LADYF+ M Y P+VF+ + + A RCD Sbjct: 138 LGVSSAKELDGASVCVQSGTTTELNLADYFRNQGMAYKPVVFDTAAQTSKGFDAGRCDVL 197 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 T D S LYAL+L PS +LP+IISK PL P + QGD +W+NI WT +AMV AEE Sbjct: 198 TTDQSGLYALRLNLKDPSSATVLPEIISKEPLGPVVRQGDDQWFNIAKWTLFAMVNAEEY 257 Query: 255 GITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNL 314 GI+ KN +++ K + +P+++R LG+D G+ LG+ DW Y++I+ +GNYGE F+R + Sbjct: 258 GISSKNADEMLK-SKDPNIKRILGVDGPK--GKGLGIRDDWGYQVIKQVGNYGESFERTV 314 Query: 315 GNQSELKIPRGYNALWSKGGLMYAPPIR 342 G S LKI RG NALW+ GG MYAPPIR Sbjct: 315 GTGSPLKISRGVNALWNAGGFMYAPPIR 342 >gi|323492614|ref|ZP_08097758.1| amino acid ABC transporter periplasmic amino acid-binding protein [Vibrio brasiliensis LMG 20546] gi|323312989|gb|EGA66109.1| amino acid ABC transporter periplasmic amino acid-binding protein [Vibrio brasiliensis LMG 20546] Length = 342 Score = 367 bits (943), Expect = e-100, Method: Compositional matrix adjust. Identities = 168/328 (51%), Positives = 229/328 (69%), Gaps = 3/328 (0%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 L TS + S L + K+GFL CG++TGL GF+ + G+W+G DV++C+AL+SA+ D Sbjct: 18 LMSTSAAAADSTLDKVTKQGFLTCGVSTGLPGFSNPNSKGEWEGIDVEYCQALASAVLGD 77 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F + Y+DGQGF++ K Sbjct: 78 KTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVGVNYYDGQGFMVKKD 137 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 G++S +L GAS+CVQ+GTTTEL LADYF+ M Y P+VF+ + + A RCD Sbjct: 138 LGLTSAKELDGASVCVQSGTTTELNLADYFRNSGMSYKPVVFDTAAQTSKGFDAGRCDVL 197 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 T D S LYAL+L PS +LP+IISK PL P + QGD +W+NI WT AMV AEE Sbjct: 198 TTDQSGLYALRLNLQDPSSAQVLPEIISKEPLGPVVRQGDDQWFNIAKWTLAAMVNAEEY 257 Query: 255 GITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNL 314 GIT KN +++ K + +P+++R LG+D G+ LG+ DW Y++I+ +GNYGE F+R + Sbjct: 258 GITSKNADEMLK-SKDPNIKRILGVDGPK--GKGLGIRDDWGYQVIKQVGNYGESFERTV 314 Query: 315 GNQSELKIPRGYNALWSKGGLMYAPPIR 342 G S L+I RG NALW+ GG MYAPPIR Sbjct: 315 GEGSPLQISRGVNALWNAGGFMYAPPIR 342 >gi|307129011|ref|YP_003881027.1| amino acid ABC transporter periplasmic amino acid-binding protein [Dickeya dadantii 3937] gi|306526540|gb|ADM96470.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Dickeya dadantii 3937] Length = 341 Score = 367 bits (943), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 168/343 (48%), Positives = 236/343 (68%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILF-FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K +++ LF F + + + L I+K+GF++CGI+ GL GF+ ANG + G Sbjct: 1 MKKVIMSTLVASASLFAFINQAHAGATLDAIQKKGFVQCGISDGLPGFSYADANGKYSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++AIF D +K+++ PL AKERF ALQS ++D+LSRNT WT R+ +GL F Sbjct: 61 DVDVCRGVAAAIFGDANKVKFTPLTAKERFTALQSGEVDLLSRNTTWTSSRDGGMGLLFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFK HNMKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKTHNMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ +P++ V+LP++ISK PL P + +GD +WY Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPADFVVLPEVISKEPLGPVVRRGDEDWYA 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GIT +N++Q++ T PD+ LG K N G+ L L DW Y+I Sbjct: 241 IVRWTLFAMLNAEEMGITSQNVDQMAAKPTTPDMSHLLG--KEGNYGKDLKLPADWAYKI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++ +GNYGE+F+RN+G SELKI RG N LW+KGG+ YAP IR Sbjct: 299 VKQVGNYGEVFERNVGQGSELKIKRGLNELWNKGGIQYAPAIR 341 >gi|119946447|ref|YP_944127.1| ABC amino acid transporter extracellular solute-binding protein, family 3 [Psychromonas ingrahamii 37] gi|119865051|gb|ABM04528.1| ABC amino acid transporter extracellular solute-binding protein, family 3 [Psychromonas ingrahamii 37] Length = 337 Score = 367 bits (943), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 164/320 (51%), Positives = 229/320 (71%), Gaps = 3/320 (0%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 +AS L ++ K+G + CGI+TG+ GF+ + G W+G DVDFC+++++A+F D SK++Y+P Sbjct: 21 SASTLEEVVKKGDINCGISTGIAGFSSTDSKGVWEGLDVDFCKSVAAAVFGDASKVKYIP 80 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 L AKERF ALQS +ID+LSR T WT R+ SLGL F + Y+DGQGF+++KK GISS + Sbjct: 81 LTAKERFTALQSGEIDVLSRATTWTATRDTSLGLNFAGVNYYDGQGFLVNKKLGISSAKE 140 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 LSGA+ C+QAGTT+EL L DYF+++NM+Y + ++ + +++ RCD T D S LY Sbjct: 141 LSGATFCIQAGTTSELNLTDYFQSNNMEYRAVTYDTSGQTVNGFKSGRCDVITSDASQLY 200 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 LKL D P ++LP+IISK PL P + QGD EW+NIV WT +A + AEELG++ N++ Sbjct: 201 GLKLKLDDPDSAIVLPEIISKEPLGPVVRQGDDEWFNIVRWTMFATLEAEELGVSSANVD 260 Query: 263 QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKI 322 + K + NP + R LG KS GE LGL DW Y+I++ +GNYGEMFD+N+G S L I Sbjct: 261 AMLK-SENPSIMRLLG--KSGTAGENLGLKGDWVYQIVKQVGNYGEMFDKNVGKDSPLNI 317 Query: 323 PRGYNALWSKGGLMYAPPIR 342 RG N LW++GGLMY+ PIR Sbjct: 318 DRGLNKLWNQGGLMYSMPIR 337 >gi|156974643|ref|YP_001445550.1| hypothetical protein VIBHAR_02361 [Vibrio harveyi ATCC BAA-1116] gi|156526237|gb|ABU71323.1| hypothetical protein VIBHAR_02361 [Vibrio harveyi ATCC BAA-1116] Length = 350 Score = 367 bits (943), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 165/328 (50%), Positives = 229/328 (69%), Gaps = 3/328 (0%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 + TS + L + K+GF+ CG++TGL GF+ + G+W+G DV++C+AL++A+ D Sbjct: 26 MMATSAQAADTTLDKVTKQGFITCGVSTGLPGFSNPNSKGEWEGIDVEYCQALAAAVLGD 85 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F + Y+DGQGF++ K Sbjct: 86 KTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVGVNYYDGQGFMVKKD 145 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 G+SS +L GAS+CVQ+GTTTEL LADYF+ M Y P+VF+ + + A RCD Sbjct: 146 LGVSSAKELDGASVCVQSGTTTELNLADYFRNQGMAYKPVVFDTAAQTSKGFDAGRCDIL 205 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 T D S LYAL+L PS +LP+IISK PL P + QGD +W+NI WT +AMV AEE Sbjct: 206 TTDQSGLYALRLNLKDPSSATVLPEIISKEPLGPVVRQGDDQWFNIAKWTLFAMVNAEEY 265 Query: 255 GITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNL 314 GI+ KN +++ K + +P+++R LG+D G+ LG+ DW Y++I+ +GNYGE F+R + Sbjct: 266 GISSKNADEMLK-SKDPNIKRILGVDGPK--GKGLGIRDDWGYQVIKQVGNYGESFERTV 322 Query: 315 GNQSELKIPRGYNALWSKGGLMYAPPIR 342 G S LKI RG NALW+ GG MYAPPIR Sbjct: 323 GTGSPLKISRGVNALWNAGGFMYAPPIR 350 >gi|28898394|ref|NP_797999.1| amino acid ABC transporter periplasmic amino acid-binding protein [Vibrio parahaemolyticus RIMD 2210633] gi|153839329|ref|ZP_01991996.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio parahaemolyticus AQ3810] gi|260366020|ref|ZP_05778498.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio parahaemolyticus K5030] gi|260876625|ref|ZP_05888980.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio parahaemolyticus AN-5034] gi|260898001|ref|ZP_05906497.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio parahaemolyticus Peru-466] gi|260901584|ref|ZP_05909979.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio parahaemolyticus AQ4037] gi|28806611|dbj|BAC59883.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio parahaemolyticus RIMD 2210633] gi|149747161|gb|EDM58149.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio parahaemolyticus AQ3810] gi|308088041|gb|EFO37736.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio parahaemolyticus Peru-466] gi|308094322|gb|EFO44017.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio parahaemolyticus AN-5034] gi|308108540|gb|EFO46080.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio parahaemolyticus AQ4037] gi|308114193|gb|EFO51733.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio parahaemolyticus K5030] gi|328473628|gb|EGF44463.1| amino acid ABC transporter periplasmic amino acid-binding protein [Vibrio parahaemolyticus 10329] Length = 342 Score = 367 bits (941), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 166/328 (50%), Positives = 228/328 (69%), Gaps = 3/328 (0%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 + TS + L + K+GFL CG++TGL GF+ + G+W+G DV++C+AL++A+ D Sbjct: 18 MMATSAQAADTTLDKVTKQGFLTCGVSTGLPGFSNPNSKGEWEGIDVEYCQALAAAVLGD 77 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F + Y+DGQGF++ K Sbjct: 78 KTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVGVNYYDGQGFMVKKD 137 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 GISS +L GAS+CVQ+GTTTEL LADYF+ M Y P+VF+ + + A RCD Sbjct: 138 LGISSAKELDGASVCVQSGTTTELNLADYFRNSGMSYKPVVFDTAAQTSKGFDAGRCDVL 197 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 T D S LYAL+L PS +LP+IISK PL P + QGD +W+NI WT AMV AEE Sbjct: 198 TTDQSGLYALRLNLKDPSSAAVLPEIISKEPLGPVVRQGDDQWFNIAKWTLAAMVNAEEY 257 Query: 255 GITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNL 314 GIT KN +++ K + +P+++R LG+D G+ LG+ DW Y++++ +GNYGE F+R + Sbjct: 258 GITSKNADEMLK-SQDPNIKRILGVDGPK--GKGLGIRDDWGYQVVKQVGNYGESFERTV 314 Query: 315 GNQSELKIPRGYNALWSKGGLMYAPPIR 342 G S L+I RG NALW+ GG MYAPPIR Sbjct: 315 GKGSPLEIARGVNALWNAGGFMYAPPIR 342 >gi|90578887|ref|ZP_01234697.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio angustum S14] gi|90439720|gb|EAS64901.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio angustum S14] Length = 342 Score = 367 bits (941), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 162/337 (48%), Positives = 234/337 (69%), Gaps = 3/337 (0%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 F ++ LF + + A+ L + K+G+++CG++ GL GF+ A G W+G DV+FC+ Sbjct: 9 FAALASSTALFAANANAEAT-LDKVMKQGYVQCGVSAGLPGFSNPNAKGQWEGLDVEFCQ 67 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 A+++A D SK++Y+PL AKERF ALQS +ID+LSRNT WTL R+ SLGL F + Y+D Sbjct: 68 AIAAATIGDKSKVKYIPLTAKERFTALQSGEIDVLSRNTTWTLHRDTSLGLNFTGVNYYD 127 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 GQGF++ K GI S +L GA++CVQ+GTTTEL LADYF+ + M Y P+VF+ + Sbjct: 128 GQGFMVKKDMGIKSAKELDGAAVCVQSGTTTELNLADYFRVNGMTYKPVVFDTAPQTSKG 187 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + + RCD T D S LYAL+L P+ V+LP+IISK PL P + QGD +W+N+V WT Sbjct: 188 FDSGRCDVLTTDQSGLYALRLNLKDPNSAVVLPEIISKEPLGPVVRQGDDQWFNVVRWTL 247 Query: 246 YAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGN 305 + M+ AEE +T N+++++K++ +P+++R +G+D G+ LGL DW Y+II+ +GN Sbjct: 248 FTMINAEEFNVTSANVDKLAKESKDPNIRRLIGLDGPK--GKGLGLKDDWGYQIIKQVGN 305 Query: 306 YGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 YGE F+R +G S LKI RG NALW+ GG+ YAPPIR Sbjct: 306 YGESFERTVGEGSPLKIKRGLNALWTNGGIQYAPPIR 342 >gi|119946443|ref|YP_944123.1| ABC amino acid transporter extracellular solute-binding protein, family 3 [Psychromonas ingrahamii 37] gi|119865047|gb|ABM04524.1| ABC amino acid transporter extracellular solute-binding protein, family 3 [Psychromonas ingrahamii 37] Length = 337 Score = 366 bits (940), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 163/320 (50%), Positives = 229/320 (71%), Gaps = 3/320 (0%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 +AS L ++ K+G + CGI+TG+ GF+ + G W+G DVDFC+++++A+F D SK++Y+P Sbjct: 21 SASTLEEVVKKGDISCGISTGIAGFSSTDSKGVWEGLDVDFCKSVAAAVFGDASKVKYIP 80 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 L AKERF ALQS +ID+LSR T WT R+ SLGL F + Y+DGQGF+++KK G++S + Sbjct: 81 LTAKERFTALQSGEIDVLSRATTWTATRDTSLGLNFAGVNYYDGQGFLVNKKIGVTSAKE 140 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 LSGA+ C+QAGTT+EL L DYF+A+NM+Y + ++ + +++ RCD T D S LY Sbjct: 141 LSGATFCIQAGTTSELNLTDYFQANNMEYRAVTYDTSGQTINGFKSGRCDVITSDASQLY 200 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 LKL D P ++LP+IISK PL P + QGD EW+NIV WT +A + AEELG++ N++ Sbjct: 201 GLKLKLDDPDSAIVLPEIISKEPLGPVVRQGDDEWFNIVRWTMFATLEAEELGVSSANVD 260 Query: 263 QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKI 322 + K + NP + R LG KS GE LGL DW Y+I++ +GNYGEMFD+N+G S L I Sbjct: 261 AMLK-SENPSIMRLLG--KSGTAGENLGLKGDWVYQIVKQVGNYGEMFDKNVGKDSPLNI 317 Query: 323 PRGYNALWSKGGLMYAPPIR 342 RG N LW++GGLMY+ PIR Sbjct: 318 DRGLNKLWNQGGLMYSMPIR 337 >gi|15641374|ref|NP_231006.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121587999|ref|ZP_01677751.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae 2740-80] gi|121728530|ref|ZP_01681553.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae V52] gi|153212726|ref|ZP_01948383.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae 1587] gi|153819348|ref|ZP_01972015.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae NCTC 8457] gi|153821335|ref|ZP_01974002.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae B33] gi|153825294|ref|ZP_01977961.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae MZO-2] gi|153828770|ref|ZP_01981437.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae 623-39] gi|183179360|ref|ZP_02957571.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae MZO-3] gi|227081533|ref|YP_002810084.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae M66-2] gi|229505057|ref|ZP_04394567.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae BX 330286] gi|229511273|ref|ZP_04400752.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae B33] gi|229515734|ref|ZP_04405193.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae TMA 21] gi|229518391|ref|ZP_04407835.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae RC9] gi|229521468|ref|ZP_04410887.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae TM 11079-80] gi|229529562|ref|ZP_04418952.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae 12129(1)] gi|229608061|ref|YP_002878709.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae MJ-1236] gi|254225346|ref|ZP_04918958.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae V51] gi|254286186|ref|ZP_04961146.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae AM-19226] gi|254848484|ref|ZP_05237834.1| amino acid ABC transporter [Vibrio cholerae MO10] gi|255745749|ref|ZP_05419697.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholera CIRS 101] gi|262158973|ref|ZP_06030085.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae INDRE 91/1] gi|262192389|ref|ZP_06050542.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae CT 5369-93] gi|297578947|ref|ZP_06940875.1| amino acid ABC transporter [Vibrio cholerae RC385] gi|298498554|ref|ZP_07008361.1| amino acid ABC transporter [Vibrio cholerae MAK 757] gi|9655856|gb|AAF94520.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121547740|gb|EAX57831.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae 2740-80] gi|121629194|gb|EAX61634.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae V52] gi|124116376|gb|EAY35196.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae 1587] gi|125622187|gb|EAZ50509.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae V51] gi|126510093|gb|EAZ72687.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae NCTC 8457] gi|126521153|gb|EAZ78376.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae B33] gi|148875723|gb|EDL73858.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae 623-39] gi|149741122|gb|EDM55181.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae MZO-2] gi|150423855|gb|EDN15796.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae AM-19226] gi|183012771|gb|EDT88071.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae MZO-3] gi|227009421|gb|ACP05633.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae M66-2] gi|229333336|gb|EEN98822.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae 12129(1)] gi|229341566|gb|EEO06569.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae TM 11079-80] gi|229345106|gb|EEO10080.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae RC9] gi|229347503|gb|EEO12463.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae TMA 21] gi|229351238|gb|EEO16179.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae B33] gi|229357280|gb|EEO22197.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae BX 330286] gi|229370716|gb|ACQ61139.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae MJ-1236] gi|254844189|gb|EET22603.1| amino acid ABC transporter [Vibrio cholerae MO10] gi|255736824|gb|EET92221.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholera CIRS 101] gi|262029158|gb|EEY47810.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae INDRE 91/1] gi|262031742|gb|EEY50327.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae CT 5369-93] gi|297536541|gb|EFH75374.1| amino acid ABC transporter [Vibrio cholerae RC385] gi|297542887|gb|EFH78937.1| amino acid ABC transporter [Vibrio cholerae MAK 757] gi|327484032|gb|AEA78439.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Vibrio cholerae LMA3894-4] Length = 342 Score = 366 bits (940), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 163/318 (51%), Positives = 227/318 (71%), Gaps = 3/318 (0%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L + +GF+ CG++TGL GF+ A G+W+G DV++C+A+++A+ D +K++++PL Sbjct: 28 STLDKVLSQGFITCGVSTGLPGFSNPNAKGEWEGIDVEYCQAMAAAVLGDKTKVKFVPLT 87 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 AKERF ALQS +ID+LSRNT WTL R+ +LGL F + Y+DGQGF++ K G+ S +L+ Sbjct: 88 AKERFTALQSGEIDVLSRNTTWTLQRDSALGLNFVGVNYYDGQGFMVKKDLGVKSAKELN 147 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 GAS+CVQ+GTTTEL LADYF+ M Y P+VF+ + + A RCD T D S LYAL Sbjct: 148 GASVCVQSGTTTELNLADYFRNSGMTYKPVVFDTAAQTSKGFDAGRCDVLTTDQSGLYAL 207 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 +L ++P V+LP+IISK PL P + Q D +W+N+ W YAMV AEE GIT KN++++ Sbjct: 208 RLNLEKPDSAVVLPEIISKEPLGPVVRQDDDKWFNVAKWVLYAMVNAEEYGITSKNVDEM 267 Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324 K + NP+V+R LG+D G LG+ DW+Y+I++ +GNYGE FDR +G+ S LKI R Sbjct: 268 MK-SDNPEVKRILGLDGPK--GTGLGIRDDWSYQIVKQVGNYGESFDRTVGSGSPLKIDR 324 Query: 325 GYNALWSKGGLMYAPPIR 342 G NALW+ GG MYAPPIR Sbjct: 325 GVNALWNAGGFMYAPPIR 342 >gi|258621541|ref|ZP_05716574.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio mimicus VM573] gi|258627556|ref|ZP_05722333.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio mimicus VM603] gi|262171608|ref|ZP_06039286.1| amino acid ABC transporter amino acid-binding protein [Vibrio mimicus MB-451] gi|258580138|gb|EEW05110.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio mimicus VM603] gi|258586159|gb|EEW10875.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio mimicus VM573] gi|261892684|gb|EEY38670.1| amino acid ABC transporter amino acid-binding protein [Vibrio mimicus MB-451] Length = 342 Score = 366 bits (940), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 164/318 (51%), Positives = 227/318 (71%), Gaps = 3/318 (0%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L + +GF+ CG++TGL GF+ A GDW+G DV++C+AL++A+ D +K++++PL Sbjct: 28 STLDKVLAQGFITCGVSTGLPGFSNPNAKGDWEGIDVEYCQALAAAVLGDKTKVKFVPLT 87 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 AKERF ALQS +ID+LSRNT WTL R+ +LGL F + Y+DGQGF++ K GI S +L Sbjct: 88 AKERFTALQSGEIDVLSRNTTWTLQRDSALGLNFVGVNYYDGQGFMVKKDLGIKSAKELD 147 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 GAS+CVQ+GTTTEL LADYF+ MKY P+VF+ + + A RCD T D S LYAL Sbjct: 148 GASVCVQSGTTTELNLADYFRNSGMKYKPVVFDTAAQTSKGFDAGRCDVLTTDQSGLYAL 207 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 +L ++P ++LP+IISK PL P + Q D +W+N+ W YAMV AEE GIT KN++++ Sbjct: 208 RLNLEKPDSALVLPEIISKEPLGPVVRQDDDKWFNVAKWVLYAMVNAEEYGITSKNVDEM 267 Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324 K + NP+V+R LG+D G LG+ DW+Y+I++ +GNYGE F+R +G+ S L+I R Sbjct: 268 MK-SDNPEVKRILGLDGPK--GTGLGIRDDWSYQIVKQVGNYGESFERTVGSGSPLQIDR 324 Query: 325 GYNALWSKGGLMYAPPIR 342 G NALW+ GG MYAPPIR Sbjct: 325 GVNALWNAGGFMYAPPIR 342 >gi|149191354|ref|ZP_01869607.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio shilonii AK1] gi|148834833|gb|EDL51817.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio shilonii AK1] Length = 342 Score = 366 bits (940), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 168/328 (51%), Positives = 229/328 (69%), Gaps = 3/328 (0%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 + TS S L + K G L CG++TGL GF+ + G+W+G DV++C+AL++A+ D Sbjct: 18 MMSTSASAADGTLDKVTKAGVLTCGVSTGLPGFSNPNSKGEWEGIDVEYCQALAAAVLGD 77 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 SK++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F + Y+DGQGF++ K Sbjct: 78 KSKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDSALGLNFVGVNYYDGQGFMVKKD 137 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 G+SS +L GAS+CVQ+GTTTEL LADYF+ + M+Y P+VF+ + + + RCD Sbjct: 138 LGLSSAKELDGASVCVQSGTTTELNLADYFRNNGMEYKPVVFDTAAQTSKGFDSGRCDVL 197 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 T D S LYAL+L PS V+LP+IISK PL P + QGD +W+NI WT AMV AEE Sbjct: 198 TTDQSGLYALRLNLQDPSSAVVLPEIISKEPLGPVVRQGDDQWFNIAKWTLAAMVNAEEY 257 Query: 255 GITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNL 314 GIT KN +++ K + +P+++R LG+D G+ LG+ DW Y+II+ +GNYGE F+R + Sbjct: 258 GITSKNADEMLK-SKDPNIKRILGVDGPK--GKGLGIRDDWGYQIIKQVGNYGESFERTV 314 Query: 315 GNQSELKIPRGYNALWSKGGLMYAPPIR 342 G S L+I RG NALW+ GG MYAPPIR Sbjct: 315 GEGSPLQISRGVNALWNAGGFMYAPPIR 342 >gi|251791415|ref|YP_003006136.1| extracellular solute-binding protein family 3 [Dickeya zeae Ech1591] gi|247540036|gb|ACT08657.1| extracellular solute-binding protein family 3 [Dickeya zeae Ech1591] Length = 343 Score = 366 bits (939), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 166/343 (48%), Positives = 236/343 (68%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILF-FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K +++ LF F + + + L I+K+GF++CGI+ GL GF+ ANG + G Sbjct: 3 MKKVIMSTLVASASLFAFINQAHAGATLDAIQKKGFVQCGISDGLPGFSYADANGKYSGI 62 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++AIF D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +GL F Sbjct: 63 DVDVCRGVAAAIFGDANKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDGGMGLLFT 122 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFK HNMKY P+ F+R Sbjct: 123 GVTYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKTHNMKYTPVTFDRS 182 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ +P++ V+LP++ISK PL P + +GD +W+ Sbjct: 183 DESAKALDSGRCDTLASDQSQLYALRIKLGKPADFVVLPEVISKEPLGPVVRRGDEDWFA 242 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GIT +N++Q++ T PD+ LG K N G+ L L DW ++I Sbjct: 243 IVRWTLFAMLNAEEMGITSQNVDQMAAKPTTPDMAHLLG--KEGNFGKDLKLPADWAFKI 300 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++ +GNYGE+F+RN+G SELKI RG N LW+KGG+ YAP +R Sbjct: 301 VKQVGNYGEVFERNVGQGSELKIKRGLNELWNKGGIQYAPTVR 343 >gi|90410648|ref|ZP_01218664.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Photobacterium profundum 3TCK] gi|90328889|gb|EAS45173.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Photobacterium profundum 3TCK] Length = 342 Score = 366 bits (939), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 161/338 (47%), Positives = 237/338 (70%), Gaps = 3/338 (0%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F +I LF + S + L + K+G+++CG++ GL GF+ + G+W+G DV+FC Sbjct: 8 LFAAIATTSALFAVNASAANTTLEKVMKQGYVQCGVSAGLPGFSNPNSKGEWEGLDVEFC 67 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 +A+++A D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F ++Y+ Sbjct: 68 QAIAAATVGDKTKVKYIPLTAKERFTALQSGEIDVLSRNTTWTLHRDSALGLNFAGVSYY 127 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 DGQGF++ K+ G+SS +L GA++CVQ+GTTTEL LADYF+ + MKY P+VF+ + Sbjct: 128 DGQGFMVKKELGVSSAKELDGAAVCVQSGTTTELNLADYFRVNGMKYSPVVFDTAPQTSK 187 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + + RCD T D S LYAL+L P+ V+LP++ISK PL P + QGD +W+NIV WT Sbjct: 188 GFDSGRCDVLTTDQSGLYALRLNLAEPASAVVLPEVISKEPLGPVVRQGDDQWFNIVKWT 247 Query: 245 HYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMG 304 AM+ AEE G+T N++++ K++ +P+++R +G+D G+ LGL+ DW Y+I++ +G Sbjct: 248 LSAMLNAEEYGVTSANVDKM-KESKDPNIRRLIGLDGPK--GKGLGLSDDWGYQIVKQVG 304 Query: 305 NYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 NYGE F+R +G S LKI RG NALW GG+ YA PIR Sbjct: 305 NYGESFERTVGTGSPLKIERGLNALWKDGGIQYAAPIR 342 >gi|262394189|ref|YP_003286043.1| amino acid ABC transporter amino acid-binding protein [Vibrio sp. Ex25] gi|262337783|gb|ACY51578.1| amino acid ABC transporter amino acid-binding protein [Vibrio sp. Ex25] Length = 342 Score = 365 bits (937), Expect = 6e-99, Method: Compositional matrix adjust. Identities = 165/328 (50%), Positives = 228/328 (69%), Gaps = 3/328 (0%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 + TS + L + K+GFL CG++TGL GF+ + G+W+G DV++C+AL++A+ D Sbjct: 18 MMATSAQAADTTLDKVTKQGFLTCGVSTGLPGFSNPNSKGEWEGIDVEYCQALAAAVLGD 77 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F + Y+DGQGF++ K Sbjct: 78 KTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVGVNYYDGQGFMVKKD 137 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 GISS +L GAS+CVQ+GTTTEL LADYF+ M Y P+VF+ + + A RCD Sbjct: 138 LGISSAKELDGASVCVQSGTTTELNLADYFRNSGMSYKPVVFDTAAQTSKGFDAGRCDVL 197 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 T D S LYAL+L PS +LP+IISK PL P + QGD +W+NI WT AM+ AEE Sbjct: 198 TTDQSGLYALRLNLKDPSSAAVLPEIISKEPLGPVVRQGDDQWFNIAKWTLSAMINAEEY 257 Query: 255 GITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNL 314 GI+ KN +++ K + +P+++R LG+D G+ LG+ DW Y++I+ +GNYGE F+R + Sbjct: 258 GISSKNADEMLK-SKDPNIKRILGVDGPK--GKGLGIRDDWGYQVIKQVGNYGESFERTV 314 Query: 315 GNQSELKIPRGYNALWSKGGLMYAPPIR 342 G S L+I RG NALW+ GG MYAPPIR Sbjct: 315 GTGSPLEISRGVNALWNAGGFMYAPPIR 342 >gi|27365994|ref|NP_761522.1| amino acid ABC transporter periplasmic amino acid-binding protein [Vibrio vulnificus CMCP6] gi|320156509|ref|YP_004188888.1| glutamate aspartate periplasmic binding protein GltI [Vibrio vulnificus MO6-24/O] gi|27362194|gb|AAO11049.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio vulnificus CMCP6] gi|319931821|gb|ADV86685.1| glutamate Aspartate periplasmic binding protein precursor GltI [Vibrio vulnificus MO6-24/O] Length = 342 Score = 365 bits (937), Expect = 6e-99, Method: Compositional matrix adjust. Identities = 169/341 (49%), Positives = 236/341 (69%), Gaps = 8/341 (2%) Query: 7 VSILCLIILFFTS-FSTNA----SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 ++IL ++ T+ S+NA S L + K+GFL CG++TGL GF+ + G+W+G DV Sbjct: 5 LTILASLVAASTAMLSSNAFAAESTLDKVTKQGFLTCGVSTGLPGFSNPNSKGEWEGIDV 64 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 ++C+A+++A+ D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F + Sbjct: 65 EYCQAIAAAVLGDKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVGV 124 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y+DGQGF++ K GI S +L GAS+CVQ+GTTTEL LADYF+ M Y P+VF+ + Sbjct: 125 NYYDGQGFMVKKDLGIKSAKELDGASVCVQSGTTTELNLADYFRNSGMSYKPVVFDTAAQ 184 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + A RCD T D S LYAL+L P+ V+LP+IISK PL P + QGD +W+NI Sbjct: 185 TSKGFDAGRCDVLTTDQSGLYALRLNLQDPNSAVVLPEIISKEPLGPVVRQGDDQWFNIA 244 Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301 WT AM+ AEE GIT KN ++ K + +P+V+R LG+D G+ LG+ DW Y++++ Sbjct: 245 KWTLNAMINAEEYGITSKNAEEMLK-SNDPNVKRILGVDGPK--GKGLGIRDDWGYQVVK 301 Query: 302 HMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGE F+R +G S L+I RG NALW+ GG MYAPPIR Sbjct: 302 QVGNYGESFERTVGTGSPLQISRGVNALWNAGGFMYAPPIR 342 >gi|323498373|ref|ZP_08103373.1| amino acid ABC transporter amino acid-binding protein [Vibrio sinaloensis DSM 21326] gi|323316615|gb|EGA69626.1| amino acid ABC transporter amino acid-binding protein [Vibrio sinaloensis DSM 21326] Length = 342 Score = 365 bits (937), Expect = 6e-99, Method: Compositional matrix adjust. Identities = 167/339 (49%), Positives = 232/339 (68%), Gaps = 4/339 (1%) Query: 5 FFVSILCLIILFF-TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 S++ F TS S S L + K+GFL CG++TGL GF+ + G+W+G DV++ Sbjct: 7 LLASVVAASTAFMATSASAADSTLDKVTKQGFLTCGVSTGLPGFSNPNSKGEWEGIDVEY 66 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 C+AL++A+ D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F + Y Sbjct: 67 CQALAAAVLGDKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVGVNY 126 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 +DGQGF++ K G+ S ++L GAS+CVQ+GTTTEL LADYF+ M Y P+VF+ + Sbjct: 127 YDGQGFMVKKDLGLKSATELDGASVCVQSGTTTELNLADYFRNSGMSYKPVVFDTAAQTS 186 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 + A RCD T D S LYAL+L PS +LP+IISK PL P + QGD +W+NI W Sbjct: 187 KGFDAGRCDVLTTDQSGLYALRLNLQDPSSAQVLPEIISKEPLGPVVRQGDDQWFNIAKW 246 Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHM 303 T AM+ AEE GI+ KN +++ K + +P+++R LG+D G+ LG+ DW Y++I+ + Sbjct: 247 TLSAMINAEEYGISSKNADEMLK-SKDPNIKRILGVDGPK--GKGLGIRDDWGYQVIKQV 303 Query: 304 GNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE F+R +G S L+I RG NALW+ GG MYAPPIR Sbjct: 304 GNYGESFERTVGTGSPLQISRGVNALWNAGGFMYAPPIR 342 >gi|311277770|ref|YP_003940001.1| extracellular solute-binding protein family 3 [Enterobacter cloacae SCF1] gi|308746965|gb|ADO46717.1| extracellular solute-binding protein family 3 [Enterobacter cloacae SCF1] Length = 341 Score = 365 bits (936), Expect = 6e-99, Method: Compositional matrix adjust. Identities = 167/343 (48%), Positives = 233/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGD-IKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K S + +LF + +A D IKK+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKTTIASFVAAGVLFAIASQAHAGATFDAIKKKGFVQCGISDGLPGFSYADADGKFTGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D SK++Y PL AKERF ALQS ++D+LSRNT WT R+ +GL+F Sbjct: 61 DVDVCRGVAAAVFGDASKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGLSFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ +P+E V+LP++ISK PL P + +GD EW+ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSKPTEWVVLPEVISKEPLGPVVRRGDDEWFA 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GI KN+++ + + +NPD+ LG K + G+ L L W Y I Sbjct: 241 IVRWTLFAMLNAEEMGINSKNVDEKAANPSNPDMSHLLG--KEGDFGKDLKLDNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+FDRN+G S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 IKQVGNYAEIFDRNVGADSPLKIKRGQNNLWNNGGIQYAPPVR 341 >gi|83592340|ref|YP_426092.1| lysine-arginine-ornithine-binding periplasmic protein [Rhodospirillum rubrum ATCC 11170] gi|83575254|gb|ABC21805.1| Lysine-arginine-ornithine-binding periplasmic protein [Rhodospirillum rubrum ATCC 11170] Length = 340 Score = 365 bits (936), Expect = 8e-99, Method: Compositional matrix adjust. Identities = 166/319 (52%), Positives = 226/319 (70%), Gaps = 3/319 (0%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 AS L +K RG + CG+N GL GFA G W G DVD CRA+++A+F D K++++PL Sbjct: 25 ASTLDTVKSRGEVTCGVNNGLPGFALPDDKGHWTGIDVDICRAVAAAVFGDAKKVKFVPL 84 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 NAKERF ALQS +ID+LSRNT WT R+ SLGL F + Y+DGQGF++ K+ G+SS +L Sbjct: 85 NAKERFTALQSGEIDVLSRNTTWTQTRDASLGLIFAGVNYYDGQGFMVKKELGVSSAKEL 144 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 +GASIC+Q+GTTTEL LADYF+A+ M Y P+VF+ ++ + RCD T D S LYA Sbjct: 145 NGASICIQSGTTTELNLADYFRANAMTYSPVVFDTSDQTVQGFAGGRCDVLTSDQSQLYA 204 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 L++ + P ++LP++ISK PL P + QGD +W NIV W+ +A + AEELG+T N ++ Sbjct: 205 LRIKLEDPKSAIVLPEVISKEPLGPMVRQGDDQWLNIVRWSLFAQLNAEELGVTSANADE 264 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 V K T+ +V+R LG + +G+ LGL DW Y I++ +GNYGEMF+RN+G S L+I Sbjct: 265 V-KAGTDQNVKRLLGTE--GEMGKQLGLGNDWAYAIVKQVGNYGEMFERNIGKGSPLEIE 321 Query: 324 RGYNALWSKGGLMYAPPIR 342 RG NALW+KGG+ YAPPIR Sbjct: 322 RGLNALWNKGGIQYAPPIR 340 >gi|37679741|ref|NP_934350.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio vulnificus YJ016] gi|37198486|dbj|BAC94321.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio vulnificus YJ016] Length = 375 Score = 364 bits (935), Expect = 9e-99, Method: Compositional matrix adjust. Identities = 169/341 (49%), Positives = 236/341 (69%), Gaps = 8/341 (2%) Query: 7 VSILCLIILFFTS-FSTNA----SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 ++IL ++ T+ S+NA S L + K+GFL CG++TGL GF+ + G+W+G DV Sbjct: 38 LTILASLVAASTAMLSSNAFAAESTLDKVTKQGFLTCGVSTGLPGFSNPNSKGEWEGIDV 97 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 ++C+A+++A+ D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F + Sbjct: 98 EYCQAIAAAVLGDKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVGV 157 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y+DGQGF++ K GI S +L GAS+CVQ+GTTTEL LADYF+ M Y P+VF+ + Sbjct: 158 NYYDGQGFMVKKDLGIKSAKELDGASVCVQSGTTTELNLADYFRNSGMSYKPVVFDTAAQ 217 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + A RCD T D S LYAL+L P+ V+LP+IISK PL P + QGD +W+NI Sbjct: 218 TSKGFDAGRCDVLTTDQSGLYALRLNLQDPNSAVVLPEIISKEPLGPVVRQGDDQWFNIA 277 Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301 WT AM+ AEE GIT KN ++ K + +P+V+R LG+D G+ LG+ DW Y++++ Sbjct: 278 KWTLNAMINAEEYGITSKNAEEMLK-SNDPNVKRILGVDGPK--GKGLGIRDDWGYQVVK 334 Query: 302 HMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGE F+R +G S L+I RG NALW+ GG MYAPPIR Sbjct: 335 QVGNYGESFERTVGTGSPLQISRGVNALWNAGGFMYAPPIR 375 >gi|261342745|ref|ZP_05970603.1| general amino acid ABC transporter, periplasmic binding protein [Enterobacter cancerogenus ATCC 35316] gi|288315398|gb|EFC54336.1| general amino acid ABC transporter, periplasmic binding protein [Enterobacter cancerogenus ATCC 35316] Length = 341 Score = 364 bits (935), Expect = 9e-99, Method: Compositional matrix adjust. Identities = 162/343 (47%), Positives = 237/343 (69%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K S+ +LF + +A + L +KK+GF++CGI+ GL GF+ ANG + G Sbjct: 1 MKKTMIASLAAAGVLFAVASQAHAGTTLDAVKKKGFVQCGISDGLPGFSYADANGKFTGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D SK++Y PL AKERF ALQS ++D+LSRNT WT R+ +G++F Sbjct: 61 DVDVCRGVAAAVFGDDSKVKYTPLTAKERFTALQSGEVDMLSRNTTWTSSRDAGMGMSFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA++MKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANSMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + +GD +W++ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDEDWFS 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GIT KN+++ + + + PD+ LG K + G+ L L W Y I Sbjct: 241 IVRWTLFAMLNAEEMGITSKNVDEKAANPSTPDMSHLLG--KEGDFGKDLKLDNKWAYHI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++ +GNYGE+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 VKQVGNYGEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341 >gi|261252934|ref|ZP_05945507.1| amino acid ABC transporter amino acid-binding protein [Vibrio orientalis CIP 102891] gi|260936325|gb|EEX92314.1| amino acid ABC transporter amino acid-binding protein [Vibrio orientalis CIP 102891] Length = 342 Score = 364 bits (934), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 165/328 (50%), Positives = 228/328 (69%), Gaps = 3/328 (0%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 L TS S S L + K+GF+ CG++TGL GF+ + G+W+G DV++C+ L++A+ D Sbjct: 18 LMSTSASAADSTLDKVTKQGFITCGVSTGLPGFSNPNSKGEWEGIDVEYCQGLAAAVLGD 77 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F + Y+DGQGF++ K Sbjct: 78 KTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVGVNYYDGQGFMVKKD 137 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 G++S +L GAS+CVQ+GTTTEL LADYF+ M Y P+VF+ + + A RCD Sbjct: 138 LGLTSAKELDGASVCVQSGTTTELNLADYFRNSGMSYKPVVFDTAAQTSKGFDAGRCDVL 197 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 T D S LYAL+L PS +LP+IISK PL P + QGD +W+NI WT AMV AEE Sbjct: 198 TTDQSGLYALRLNLQDPSSAQVLPEIISKEPLGPVVRQGDDQWFNIAKWTLAAMVNAEEY 257 Query: 255 GITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNL 314 GI+ KN +++ K + +P+++R LG+D G+ LG+ DW Y++I+ +GNYGE F+R + Sbjct: 258 GISSKNADEMLK-SKDPNIKRILGVDGPK--GKGLGIRDDWGYQVIKQVGNYGESFERTV 314 Query: 315 GNQSELKIPRGYNALWSKGGLMYAPPIR 342 G S L+I RG NALW+ GG MYAPPIR Sbjct: 315 GEGSPLQISRGVNALWNAGGFMYAPPIR 342 >gi|254508781|ref|ZP_05120893.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio parahaemolyticus 16] gi|219548301|gb|EED25314.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio parahaemolyticus 16] Length = 342 Score = 363 bits (933), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 167/339 (49%), Positives = 231/339 (68%), Gaps = 4/339 (1%) Query: 5 FFVSILCLIILFF-TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 S++ F TS S S L + K+GF+ CG++TGL GF+ + G+W+G DV++ Sbjct: 7 LLASVVAASTAFMATSASAADSTLDKVTKQGFITCGVSTGLPGFSNPNSKGEWEGIDVEY 66 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 C+AL++A+ D SK++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F + Y Sbjct: 67 CQALAAAVLGDKSKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVGVNY 126 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 +DGQGF++ K G+ S +L GAS+CVQ+GTTTEL LADYF+ M Y P+VF+ + Sbjct: 127 YDGQGFMVKKDLGLKSAKELDGASVCVQSGTTTELNLADYFRNSGMSYKPVVFDTAAQTS 186 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 + A RCD T D S LYAL+L P+ +LP+IISK PL P + QGD +W+NI W Sbjct: 187 KGFDAGRCDVLTTDQSGLYALRLNLQDPASAQVLPEIISKEPLGPVVRQGDDQWFNIAKW 246 Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHM 303 T AM+ AEE GI+ KN +++ K + +P+V+R LG+D G+ LG+ DW Y++I+ + Sbjct: 247 TLNAMINAEEYGISSKNADEMLK-SKDPNVKRILGVDGPK--GKGLGIRDDWGYQVIKQV 303 Query: 304 GNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE F+R +G S L+I RG NALW+ GG MYAPPIR Sbjct: 304 GNYGESFERTVGTGSPLQISRGVNALWNAGGFMYAPPIR 342 >gi|260772752|ref|ZP_05881668.1| amino acid ABC transporter amino acid-binding protein [Vibrio metschnikovii CIP 69.14] gi|260611891|gb|EEX37094.1| amino acid ABC transporter amino acid-binding protein [Vibrio metschnikovii CIP 69.14] Length = 340 Score = 363 bits (933), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 170/339 (50%), Positives = 230/339 (67%), Gaps = 5/339 (1%) Query: 6 FVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 +++C + L T+ AS L + +G L CGI+TGL GF++ A G W+G DVD+ Sbjct: 5 LATLVCAVSLSLTTHLAFASPTTLDRVLTQGKLTCGISTGLAGFSDADAKGQWQGLDVDY 64 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 CRAL++A+ D +K++Y+PL A+ERF ALQS Q+D+LSRNT WT R+ ++GL F + + Sbjct: 65 CRALAAAVLGDKNKVEYVPLTARERFNALQSGQVDVLSRNTTWTFERDTTMGLNFVGVNF 124 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 +DGQGF++ KK I+ VSQL+ ICVQ+ TTT+L L DYF+ H M Y P+VF+ +I Sbjct: 125 YDGQGFMVTKKSAITQVSQLNNRPICVQSETTTKLNLDDYFRHHGMSYQPVVFDTAIQIA 184 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 A+ A RC A T D S LYAL+L +P +ILP+IISK PL P I +GD W NI W Sbjct: 185 RAFNAERCVAVTADKSGLYALRLNLAKPDSAIILPEIISKEPLGPVIREGDDRWLNITRW 244 Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHM 303 T AM+ AEELGIT N++Q K +TNP+++R LG++ IG LG+ DW Y+II+ + Sbjct: 245 TLAAMINAEELGITSANVDQQRK-STNPEIRRLLGVE--GEIGRPLGINNDWAYQIIKQV 301 Query: 304 GNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNY E F RN+G S L IPRG NALW+ GG+MYA PIR Sbjct: 302 GNYSESFQRNVGEDSPLAIPRGLNALWNAGGIMYATPIR 340 >gi|149908408|ref|ZP_01897071.1| general L-amino acid-binding protein [Moritella sp. PE36] gi|149808571|gb|EDM68506.1| general L-amino acid-binding protein [Moritella sp. PE36] Length = 337 Score = 363 bits (932), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 163/320 (50%), Positives = 224/320 (70%), Gaps = 3/320 (0%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 NA+ L + K+G L CG++TG+ GF+ + G WKG DVDFCR++++A+ D SK++Y+P Sbjct: 21 NAATLEQVMKKGVLNCGVSTGIPGFSATDSKGVWKGIDVDFCRSVAAAVLGDASKVKYIP 80 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 L AKERF ALQS +ID+LSR + WT R+ SLGL F + Y+DGQGF++ K+ G++S + Sbjct: 81 LTAKERFTALQSGEIDLLSRASTWTATRDTSLGLNFAGVNYYDGQGFLVKKEIGVTSAKE 140 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L GAS C+QAGTTTEL L DYFK++NM+Y + F+ + A++ RCDA T D S LY Sbjct: 141 LDGASFCIQAGTTTELNLTDYFKSNNMEYKAVTFDTSGQTIDAFKKGRCDAVTSDASQLY 200 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 L++ D P ++LPDIISK PL P + QGD W+N+V W+ +A + AEELG+T N++ Sbjct: 201 GLRIKLDDPKSAIVLPDIISKEPLGPVVRQGDDAWFNVVRWSLFATLEAEELGVTASNVD 260 Query: 263 QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKI 322 + K + NP V+R LG+ + GE LGL DW Y+I++ +GNY EMFD N+G S L I Sbjct: 261 KQLK-SNNPSVKRLLGV--TGKAGENLGLKSDWAYQIVKQVGNYEEMFDNNVGKNSPLNI 317 Query: 323 PRGYNALWSKGGLMYAPPIR 342 RG N LW+KGGLMYA PIR Sbjct: 318 DRGLNNLWNKGGLMYAMPIR 337 >gi|75675721|ref|YP_318142.1| extracellular solute-binding protein [Nitrobacter winogradskyi Nb-255] gi|74420591|gb|ABA04790.1| amino acid ABC transporter substrate-binding protein, PAAT family [Nitrobacter winogradskyi Nb-255] Length = 346 Score = 363 bits (931), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 162/318 (50%), Positives = 230/318 (72%), Gaps = 3/318 (0%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 + L +K RG L CG++ GL GF+ G+W G DVD CRA+++ +F+DP+K++++PL+ Sbjct: 32 TTLEAVKARGALSCGVSQGLPGFSAPDDKGNWTGLDVDICRAIAAVVFNDPTKVKFVPLS 91 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 AK+RF+ALQS +ID+LSR+T WTL R+ SLG F +TY+DGQGF++ K ++S +L+ Sbjct: 92 AKDRFIALQSGEIDVLSRDTTWTLSRDTSLGANFTGVTYYDGQGFLIRKSLKVNSALELN 151 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 AS+CVQ GTT E LADYFK++ MKY I F +E AY + RCD +T DIS LYA Sbjct: 152 SASVCVQTGTTNEQNLADYFKSNKMKYEVIAFSTADETIKAYESGRCDVFTSDISQLYAQ 211 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 +L P++H +LP++ISK P A + GD +W+++V WT +AM+ AEELGIT+KN++++ Sbjct: 212 RLKLINPADHAVLPEVISKEPHATMVRHGDDQWFDLVKWTLFAMINAEELGITKKNVDEM 271 Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324 ++ + NP+++R G D N GE LG+TKDW RII+ +GNYGE FDRN+G S L I R Sbjct: 272 AR-SENPELKRIFGTD--GNFGEQLGVTKDWVSRIIKAVGNYGESFDRNVGAGSPLGIAR 328 Query: 325 GYNALWSKGGLMYAPPIR 342 G N LW++GG+MYAPPIR Sbjct: 329 GLNKLWNQGGIMYAPPIR 346 >gi|163800832|ref|ZP_02194732.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio sp. AND4] gi|159175181|gb|EDP59978.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio sp. AND4] Length = 342 Score = 363 bits (931), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 165/334 (49%), Positives = 225/334 (67%), Gaps = 3/334 (0%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 I + T+ L + K+GFL CG++TGL GF+ A G+W+G DV++C+AL+ Sbjct: 12 IAASTTMLATTAHAADGTLEKVTKQGFLNCGVSTGLPGFSNPNAKGEWEGIDVEYCQALA 71 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 +A+ D SK++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F + Y+DGQG Sbjct: 72 AAVLGDKSKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVGVNYYDGQG 131 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 F++ K +SS L GAS+CVQ+GTTTEL LADYF+ M Y P+VF+ + + A Sbjct: 132 FMVKKDLEVSSAKDLDGASVCVQSGTTTELNLADYFRNQGMAYKPVVFDTAAQTSKGFDA 191 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 RCD T D S LYAL+L + PS +LP+IISK PL P + QGD W+NI WT M Sbjct: 192 GRCDVLTTDQSGLYALRLNLEDPSSATVLPEIISKEPLGPVVRQGDDRWFNIAKWTLATM 251 Query: 249 VTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGE 308 V AEE GI+ KN++++ K + +P+++R LG+D G+ LG+ DW Y++I+ +GNYGE Sbjct: 252 VNAEEYGISSKNVDEMKK-SKDPNIKRILGVDGPK--GKGLGIRDDWGYQVIKQVGNYGE 308 Query: 309 MFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 F+R +G S L I RG NALW+ GG MYAPPIR Sbjct: 309 SFERTVGTASPLNISRGVNALWNAGGFMYAPPIR 342 >gi|242241099|ref|YP_002989280.1| extracellular solute-binding protein family 3 [Dickeya dadantii Ech703] gi|242133156|gb|ACS87458.1| extracellular solute-binding protein family 3 [Dickeya dadantii Ech703] Length = 343 Score = 362 bits (930), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 166/343 (48%), Positives = 234/343 (68%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K +++ LF + +A + L I+K+GF++CGI+ GL GF+ A G + G Sbjct: 3 MKKVIMSTLVAGASLFALANQAHAGATLDAIQKKGFVQCGISDGLPGFSYADAGGKYTGI 62 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D +K++Y PL AKERF ALQS ++DILSRNT WT R+ +GL F Sbjct: 63 DVDVCRGVAAAVFGDANKVKYTPLTAKERFTALQSGEVDILSRNTTWTSSRDGGMGLLFT 122 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFK +NMKY P+ F+R Sbjct: 123 GVTYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKTNNMKYTPVTFDRS 182 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ +P+E V+LP++ISK PL P + +GD +W+ Sbjct: 183 DESAKALDSGRCDTLASDQSQLYALRIKLGKPTEFVVLPEVISKEPLGPVVRRGDEDWFA 242 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GIT KN++ ++ T PD+ LG K N G+ L L DW Y+I Sbjct: 243 IVRWTLFAMLNAEEMGITSKNVDALAAKPTTPDMAHLLG--KEGNFGKDLKLPNDWAYKI 300 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++ +GNYGE+F+RN+G SELKI RG N LW+KGG+ YAP +R Sbjct: 301 VKQVGNYGEVFERNVGQGSELKIKRGLNELWNKGGIQYAPAVR 343 >gi|54309363|ref|YP_130383.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Photobacterium profundum SS9] gi|46913799|emb|CAG20581.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Photobacterium profundum SS9] Length = 342 Score = 362 bits (928), Expect = 5e-98, Method: Compositional matrix adjust. Identities = 160/338 (47%), Positives = 235/338 (69%), Gaps = 3/338 (0%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 +I LF + S + L + K+G+++CG++ GL GF+ + G+W+G DV+FC Sbjct: 8 LLAAIATTSALFAVNASAANTTLEKVMKQGYVQCGVSAGLPGFSNPNSKGEWEGLDVEFC 67 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 +A+++A D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F ++Y+ Sbjct: 68 QAIAAATVGDKTKVKYIPLTAKERFTALQSGEIDVLSRNTTWTLHRDSALGLNFAGVSYY 127 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 DGQGF++ K+ G+SS +L GA++CVQ+GTTTEL LADYF+ + MKY P+VF+ + Sbjct: 128 DGQGFMVKKELGVSSAKELDGAAVCVQSGTTTELNLADYFRVNGMKYSPVVFDTAPQTSK 187 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + + RCD T D S LYAL+L P+ V+LP++ISK PL P + QGD +W+NIV WT Sbjct: 188 GFDSGRCDVLTTDQSGLYALRLNLADPASAVVLPEVISKEPLGPVVRQGDDQWFNIVKWT 247 Query: 245 HYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMG 304 AM+ AEE G+T N++++ K++ +P+++R +G+D G+ LGL DW Y+I++ +G Sbjct: 248 LSAMLNAEEYGVTSANVDKM-KESKDPNIRRLIGLDGPK--GKGLGLNDDWGYQIVKQVG 304 Query: 305 NYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 NYGE F+R +G S LKI RG NALW GG+ YA PIR Sbjct: 305 NYGESFERTVGTGSPLKIERGLNALWKDGGIQYAAPIR 342 >gi|147674492|ref|YP_001216921.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae O395] gi|262169332|ref|ZP_06037024.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae RC27] gi|146316375|gb|ABQ20914.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae O395] gi|227013279|gb|ACP09489.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae O395] gi|262022145|gb|EEY40854.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae RC27] Length = 342 Score = 362 bits (928), Expect = 6e-98, Method: Compositional matrix adjust. Identities = 162/318 (50%), Positives = 226/318 (71%), Gaps = 3/318 (0%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L + +GF+ CG++TGL GF+ A G+W+G DV++C+A+++A+ D +K++++PL Sbjct: 28 STLDKVLSQGFITCGVSTGLPGFSNPNAKGEWEGIDVEYCQAMAAAVLGDKTKVKFVPLT 87 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 AKERF ALQS +ID+LSRNT WTL R+ +LGL F + Y+DGQGF++ K G+ S +L+ Sbjct: 88 AKERFTALQSGEIDVLSRNTTWTLQRDSALGLNFVGVNYYDGQGFMVKKDLGVKSAKELN 147 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 GAS+CVQ+GTTTEL LADYF+ M Y P+VF+ + + A RCD T D S LYAL Sbjct: 148 GASVCVQSGTTTELNLADYFRNSGMTYKPVVFDTAAQTSKGFDAGRCDVLTTDQSGLYAL 207 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 +L ++P V+LP+IISK PL P + Q D +W+N+ W YAMV AEE GIT KN++++ Sbjct: 208 RLNLEKPDSAVVLPEIISKEPLGPVVRQDDDKWFNVAKWVLYAMVNAEEYGITSKNVDEM 267 Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324 K + NP+V+R LG+D G LG+ D +Y+I++ +GNYGE FDR +G+ S LKI R Sbjct: 268 MK-SDNPEVKRILGLDGPK--GTGLGIRDDCSYQIVKQVGNYGESFDRTVGSGSPLKIDR 324 Query: 325 GYNALWSKGGLMYAPPIR 342 G NALW+ GG MYAPPIR Sbjct: 325 GVNALWNAGGFMYAPPIR 342 >gi|306841324|ref|ZP_07474033.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella sp. BO2] gi|306288627|gb|EFM59963.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella sp. BO2] Length = 339 Score = 362 bits (928), Expect = 6e-98, Method: Compositional matrix adjust. Identities = 167/342 (48%), Positives = 228/342 (66%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++L A L +K+RG + CG++ G+ GF+ G W GFD Sbjct: 1 MKKTVWGALLAAGFALSVQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDQGKWTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS +D+LSR T WTL R+ +G+ F Sbjct: 61 IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVG 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+DGQGF++ K G+ S +L GASIC + GTTTE +ADYF AHN+KY P+V + + Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSAD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 I A+ RCD YT D SALYA +L P +++LP++ISK PL PA+ QGD +W+NI Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +A++ AEELGITQK + + D+ PDV+RFLG + + G+ LGL W Y I+ Sbjct: 241 VRWTLFALLEAEELGITQKTV-EADLDSRKPDVRRFLGSEGDN--GQQLGLEPKWAYNIV 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGEMF+R +G S LKI RG NALW+KGGLMYAPP++ Sbjct: 298 ASVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339 >gi|39937855|ref|NP_950131.1| ABC transporter amino acid binding protein [Rhodopseudomonas palustris CGA009] gi|39651715|emb|CAE30237.1| ABC transporter, amino acid binding protein [Rhodopseudomonas palustris CGA009] Length = 344 Score = 362 bits (928), Expect = 6e-98, Method: Compositional matrix adjust. Identities = 164/311 (52%), Positives = 226/311 (72%), Gaps = 6/311 (1%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 +R + CG+N GL GF+ G+W GFDVDFCRA+++AIFDDP+K+Q++PL+A ERF Sbjct: 40 RRDAVLCGVNKGLPGFSTPDDKGNWTGFDVDFCRAVAAAIFDDPTKVQFVPLDANERFKE 99 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151 LQS+++DILSRN+ W++ RE + L F + Y+DGQGF++ + I S +L G+ +CVQ Sbjct: 100 LQSRKVDILSRNSTWSMSRETNYDLYFPAVAYYDGQGFMVPASRKIDSAVELDGSKVCVQ 159 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 GTTT+L LADYF+A+NMKY + E+ +++ AY+ +CD +T D+S LYAL+ T ++ Sbjct: 160 NGTTTQLNLADYFRANNMKYQEVKSEKFDDVVKAYKDGQCDTFTADVSQLYALRKTFEKS 219 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 +H+ILPD+ISK PLAP + Q D +W IV WT YAM+ AEELGIT +NI + K + P Sbjct: 220 GDHIILPDVISKEPLAPVVRQRDDDWMMIVKWTLYAMINAEELGITSQNIGEALK-SKKP 278 Query: 272 DVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWS 331 DV R +G + + GE LGL+KDW RIIRH+GNYGE++DRN+G +L IPRG N LWS Sbjct: 279 DVMRLVGTEGA--FGEDLGLSKDWAARIIRHVGNYGEVYDRNVG---KLGIPRGLNQLWS 333 Query: 332 KGGLMYAPPIR 342 GG+ YAPPIR Sbjct: 334 NGGIQYAPPIR 344 >gi|260596110|ref|YP_003208681.1| putative amino-acid ABC transporter-binding protein yhdW [Cronobacter turicensis z3032] gi|260215287|emb|CBA27219.1| Putative amino-acid ABC transporter-binding protein yhdW [Cronobacter turicensis z3032] Length = 353 Score = 361 bits (927), Expect = 8e-98, Method: Compositional matrix adjust. Identities = 163/343 (47%), Positives = 233/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K ++ LF + +A + L +KK+GF++CGI+ GL GF+ A G + G Sbjct: 13 MKKMMIATLAAAGTLFAVANQAHAGATLDSVKKKGFVQCGISDGLPGFSYADAGGKFTGI 72 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D SK++Y PL AKERF ALQS ++D+LSRNT WT R+ +G++F Sbjct: 73 DVDVCRGVAAAVFGDASKVKYTPLTAKERFTALQSGEVDVLSRNTTWTSSRDAGMGMSFT 132 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R Sbjct: 133 GVTYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 192 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + +GD EW++ Sbjct: 193 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDEEWFS 252 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GI KN++ + + + PD+ LG K + G+ L L W Y I Sbjct: 253 IVRWTLFAMLNAEEMGIDSKNVDAKAANPSTPDMAHLLG--KEGDYGKDLKLDNKWAYNI 310 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNYGE+F+RN+G +S LKI RG N LW+KGG+ YAPP+R Sbjct: 311 IKQVGNYGEIFERNVGQESPLKIKRGQNNLWNKGGIQYAPPVR 353 >gi|50119205|ref|YP_048372.1| general L-amino ABC transporter binding protein [Pectobacterium atrosepticum SCRI1043] gi|227114001|ref|ZP_03827657.1| general L-amino ABC transporter binding protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] gi|253686635|ref|YP_003015825.1| extracellular solute-binding protein family 3 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|49609731|emb|CAG73165.1| general L-amino ABC transporter binding protein [Pectobacterium atrosepticum SCRI1043] gi|251753213|gb|ACT11289.1| extracellular solute-binding protein family 3 [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 341 Score = 361 bits (927), Expect = 8e-98, Method: Compositional matrix adjust. Identities = 158/319 (49%), Positives = 227/319 (71%), Gaps = 2/319 (0%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + L I+K+GF++CGI+ GL GF+ A+G + G DVD CR L++A+F D +K++Y PL Sbjct: 25 GATLDAIQKKGFVQCGISDGLPGFSYADASGKYSGIDVDVCRGLAAAVFGDANKVKYTPL 84 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 AKERF ALQS ++D+LSRNT WT R+ +G+ F +TY+DG GF+ H K G++S +L Sbjct: 85 TAKERFTALQSGEVDVLSRNTTWTSSRDGGMGMLFTGVTYYDGIGFLTHNKAGLTSAKEL 144 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 GA++C+QAGT TEL +ADYFK H M+Y P+ F+R +E A + RCD D S LYA Sbjct: 145 DGATVCIQAGTDTELNVADYFKTHKMQYTPVTFDRSDESAKALESGRCDTLASDQSQLYA 204 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 L++ +P+E ++LP++ISK PL P + +GD EW++IV WT +AM+ AEE+G+T KN++Q Sbjct: 205 LRIKLSKPAEFIVLPEVISKEPLGPVVRRGDEEWFSIVRWTLFAMLNAEEMGVTSKNVDQ 264 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 ++ T PD+ LG + S G+ L L DW ++II+ +GNYGE+F+RN+G SELKI Sbjct: 265 LAAKPTTPDMSHLLGHEGS--YGKDLKLPNDWAFKIIKQVGNYGEIFERNVGMGSELKIK 322 Query: 324 RGYNALWSKGGLMYAPPIR 342 RG N LW+KGG+ YAP +R Sbjct: 323 RGLNELWNKGGIQYAPAVR 341 >gi|306846158|ref|ZP_07478720.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella sp. BO1] gi|306273409|gb|EFM55270.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella sp. BO1] Length = 339 Score = 361 bits (926), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 167/342 (48%), Positives = 227/342 (66%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++L A L +K+RG + CG++ G+ GF+ G W GFD Sbjct: 1 MKKTVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDQGKWTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS +D+LSR T WTL R+ +G+ F Sbjct: 61 IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVG 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+DGQGF++ K G+ S +L GASIC + GTTTE +ADYF AHN+KY P+V + + Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSAD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 I A+ RCD YT D SALYA +L P +++LP++ISK PL PA+ QGD +W+NI Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +A++ AEELGITQK + D+ PDV+RFLG + + G+ LGL W Y I+ Sbjct: 241 VRWTLFALLEAEELGITQKTV-AADLDSRKPDVRRFLGSEGDN--GQQLGLEPKWAYNIV 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGEMF+R +G S LKI RG NALW+KGGLMYAPP++ Sbjct: 298 ASVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339 >gi|148252293|ref|YP_001236878.1| general L-amino acid-binding periplasmic protein [Bradyrhizobium sp. BTAi1] gi|146404466|gb|ABQ32972.1| amino acid ABC transporter substrate-binding protein, PAAT family [Bradyrhizobium sp. BTAi1] Length = 345 Score = 361 bits (926), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 162/311 (52%), Positives = 226/311 (72%), Gaps = 3/311 (0%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 +RG + CG+N GL GF+ G+W GFDVDFCRA+++AIFDDP K +++PL+A ERF Sbjct: 38 RRGEVLCGVNAGLPGFSIPDDKGNWTGFDVDFCRAVAAAIFDDPKKAKFVPLDANERFKE 97 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151 LQS+++DILSRNT W++ RE + L F + Y+DGQGF++ + + + + L+G+ +CVQ Sbjct: 98 LQSRKVDILSRNTTWSMAREQNYDLYFPAVAYYDGQGFMVPRSRKLETALDLNGSKVCVQ 157 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 TT L LADYF+A+NMKY I F +++++ AY + +CD +T D+S LYAL+L +P Sbjct: 158 DSTTNALNLADYFRANNMKYEEIKFLKLDDVLKAYDSGKCDTFTADVSQLYALRLVLTKP 217 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 ++H ILPD+ISK PLAP + Q D +W IV WT YAM+ AEELG+T KNI++ K + P Sbjct: 218 NDHDILPDMISKEPLAPVVRQRDDDWMMIVKWTLYAMINAEELGVTSKNIDEALK-SKKP 276 Query: 272 DVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWS 331 DV R +G G+ LGL KDW RIIRH+GNYGE+++RN+G++S+LKIPRG N LW+ Sbjct: 277 DVMRLVG--NEGTYGQDLGLAKDWAARIIRHVGNYGEVYERNIGSESKLKIPRGMNQLWN 334 Query: 332 KGGLMYAPPIR 342 GG+ YAPPIR Sbjct: 335 AGGIQYAPPIR 345 >gi|254720190|ref|ZP_05182001.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella sp. 83/13] gi|265985199|ref|ZP_06097934.1| extracellular solute-binding protein family 3 [Brucella sp. 83/13] gi|306838669|ref|ZP_07471505.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella sp. NF 2653] gi|264663791|gb|EEZ34052.1| extracellular solute-binding protein family 3 [Brucella sp. 83/13] gi|306406312|gb|EFM62555.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella sp. NF 2653] Length = 339 Score = 360 bits (925), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 168/342 (49%), Positives = 227/342 (66%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++L A L +K+RG + CG++ G+ GF+ G W GFD Sbjct: 1 MKKTVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDQGKWTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS +D+LSR T WTL R+ LG+ F Sbjct: 61 IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGLGIHFVG 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+DGQGF++ K G+ S +L GASIC + GTTTE +ADYF AHN+KY P+V + + Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSAD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 I A+ RCD YT D SALYA +L P +++LP++ISK PL PA+ QGD +W+NI Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPEAYMVLPEVISKEPLGPAVRQGDDKWFNI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +A++ AEELGITQK + D+ PDV+RFLG + + G+ LGL W Y I+ Sbjct: 241 VRWTLFALLEAEELGITQKTV-AADLDSRKPDVRRFLGSEGDN--GQQLGLEPKWAYNIV 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGEMF+R +G S LKI RG NALW+KGGLMYAPP++ Sbjct: 298 ALVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339 >gi|256111139|ref|ZP_05452175.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella melitensis bv. 3 str. Ether] gi|265992652|ref|ZP_06105209.1| extracellular solute-binding protein [Brucella melitensis bv. 3 str. Ether] gi|262763522|gb|EEZ09554.1| extracellular solute-binding protein [Brucella melitensis bv. 3 str. Ether] Length = 339 Score = 360 bits (925), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 167/342 (48%), Positives = 227/342 (66%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++L A L +K+RG + CGI+ G+ GF+ G W GFD Sbjct: 1 MKKTVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGISQGVAGFSSPDDQGKWTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS +D+LSR T WTL R+ +G+ F Sbjct: 61 IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVG 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+DGQGF++ K G+ S +L GASIC + GTTTE +ADYF AHN+KY P+V + + Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSAD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 I A+ RCD YT D SALYA +L P +++LP++ISK PL PA+ QGD +W+NI Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +A++ AEELGITQK + D+ PD++RFLG + + G+ LGL W Y I+ Sbjct: 241 VRWTLFALLEAEELGITQKTV-AADLDSRKPDIRRFLGSEGDN--GQQLGLEPKWAYNIV 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGEMF+R +G S LKI RG NALW+KGGLMYAPP++ Sbjct: 298 ASVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339 >gi|85714820|ref|ZP_01045806.1| extracellular solute-binding protein, family 3 [Nitrobacter sp. Nb-311A] gi|85698306|gb|EAQ36177.1| extracellular solute-binding protein, family 3 [Nitrobacter sp. Nb-311A] Length = 345 Score = 360 bits (925), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 161/311 (51%), Positives = 221/311 (71%), Gaps = 3/311 (0%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 +R + CG+N G+ GF+ G+W GFDVDFCRA+++AIFDDP+K++++PL + ERF Sbjct: 38 RRDAVLCGVNAGVPGFSNSDEKGNWSGFDVDFCRAVAAAIFDDPAKVKFVPLESDERFKE 97 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151 LQS+++DIL+RN+ W++ RE + L F + Y+DG+GF++ + S L ICVQ Sbjct: 98 LQSRKVDILARNSTWSMSRETNYNLYFPAVAYYDGEGFMVRTSRKADSALDLGDTKICVQ 157 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 TTT+L LADYFKA+N+KY I F ++E++ AY +CD T D+S LYAL+L +P Sbjct: 158 DSTTTKLNLADYFKANNLKYEEIKFGKLEDMLRAYDEAKCDVLTADVSHLYALRLRLTKP 217 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 +E ILPD+ISK PLAP + Q D +W I+ WT YAM+ AEELG+T KNI++ K + P Sbjct: 218 NESFILPDVISKEPLAPVVRQRDDDWMMIIKWTLYAMINAEELGVTSKNIDEAMK-SKKP 276 Query: 272 DVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWS 331 DV R +G D GE LGLTKDW RI+RH+GNYGE++DRN+G+ S LKIPRG N LW+ Sbjct: 277 DVMRLVGTD--GQYGEGLGLTKDWAARIVRHVGNYGEVYDRNIGSDSRLKIPRGLNQLWN 334 Query: 332 KGGLMYAPPIR 342 GG+MYAPP+R Sbjct: 335 AGGIMYAPPLR 345 >gi|146313341|ref|YP_001178415.1| extracellular solute-binding protein [Enterobacter sp. 638] gi|145320217|gb|ABP62364.1| amino acid ABC transporter substrate-binding protein, PAAT family [Enterobacter sp. 638] Length = 341 Score = 360 bits (925), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 163/343 (47%), Positives = 232/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K S+ +LF + +A + L +KK+GF++CGI+ GL GF+ ANG + G Sbjct: 1 MKKTMIASLAAAGMLFAVAGQAHAGATLDAVKKKGFVQCGISDGLPGFSYADANGKFSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +G+ F Sbjct: 61 DVDVCRGVAAALFGDDTKVKYTPLTAKERFTALQSGEVDVLSRNTTWTSSRDAGMGMTFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+ MKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + +GD EW + Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDEEWTS 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GI KN+++ + + PD+ LG K + G+ L L W Y I Sbjct: 241 IVKWTLFAMLNAEEMGINSKNVDEKAAAPSTPDMAHLLG--KEGDYGKDLKLDNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+H+GNYGE+F RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 IKHVGNYGEIFARNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341 >gi|328543624|ref|YP_004303733.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Polymorphum gilvum SL003B-26A1] gi|326413367|gb|ADZ70430.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Polymorphum gilvum SL003B-26A1] Length = 300 Score = 360 bits (925), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 161/303 (53%), Positives = 220/303 (72%), Gaps = 3/303 (0%) Query: 40 INTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99 ++ GL GF+ A G+W G DVD CRA+++A+F D S +++ PL+AKERF ALQS +IDI Sbjct: 1 MSQGLPGFSNPDAQGNWTGLDVDVCRAVAAAVFGDASAVKFTPLSAKERFTALQSGEIDI 60 Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELT 159 LSRNT WT+ R+ SLGL F +TY+DGQGF++ K G++S +LSGAS+C GTTTEL Sbjct: 61 LSRNTTWTMSRDTSLGLNFAGVTYYDGQGFMVRKALGVTSALELSGASVCTNTGTTTELN 120 Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219 +ADYF+ +NM Y + FE+ +E+ AY A RCD +T D S LYA +L P +H++LP+ Sbjct: 121 VADYFRTNNMPYEIVAFEKSDEVVQAYDAGRCDVFTTDASGLYAERLKLSNPGDHMVLPE 180 Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGI 279 IISK PL P + QGD +W+NI WT AM+ AEELG+T N++++ K + NP+++R LGI Sbjct: 181 IISKEPLGPVVRQGDDQWFNIARWTLNAMINAEELGVTSANVDEM-KSSENPEIKRLLGI 239 Query: 280 DKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAP 339 + + GE + L+ DW Y II+ +GNYGE FDRN+G + L I RG NALWSKGG++YAP Sbjct: 240 EGA--FGEGVSLSNDWAYNIIKQVGNYGEAFDRNVGPDTPLGIARGLNALWSKGGILYAP 297 Query: 340 PIR 342 PIR Sbjct: 298 PIR 300 >gi|229523536|ref|ZP_04412941.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae bv. albensis VL426] gi|229337117|gb|EEO02134.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae bv. albensis VL426] Length = 342 Score = 360 bits (925), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 162/318 (50%), Positives = 223/318 (70%), Gaps = 3/318 (0%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L + +GF+ CG++TGL GF+ A G+W+G DV++C+A+++A+ D +K++++PL Sbjct: 28 STLDKVLSQGFITCGVSTGLPGFSNPNAKGEWEGIDVEYCQAMAAAVLGDKTKVKFVPLT 87 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 AKERF ALQS +ID+LSRNT WTL R+ +LG F + Y+DGQGF++ K G+ S +L+ Sbjct: 88 AKERFTALQSGEIDVLSRNTTWTLQRDSALGRNFVGVNYYDGQGFMVKKDLGVKSAKELN 147 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 GAS+CVQ+GTTTEL LADYF+ M Y P+VF+ + + A RCD T D S LYAL Sbjct: 148 GASVCVQSGTTTELNLADYFRNSGMTYKPVVFDTAAQTSKGFDAGRCDVLTTDQSGLYAL 207 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 +L ++P V+LP+IISK PL P + Q D +W+N+ W YAMV AEE GIT KN++++ Sbjct: 208 RLNLEKPDSAVVLPEIISKEPLGPVVRQDDDKWFNVAKWVLYAMVNAEEYGITSKNVDEM 267 Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324 K + NP+V R LG D G LG+ DW+Y+I++ +GNYGE FDR +G S LKI R Sbjct: 268 MK-SDNPEVMRILGRDGPK--GTGLGIRDDWSYQIVKQVGNYGESFDRTVGAGSPLKIDR 324 Query: 325 GYNALWSKGGLMYAPPIR 342 G NALW+ GG MYAPPIR Sbjct: 325 GVNALWNAGGFMYAPPIR 342 >gi|296104983|ref|YP_003615129.1| general L-amino acid transport system substrate-binding protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059442|gb|ADF64180.1| general L-amino acid transport system substrate-binding protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 341 Score = 360 bits (924), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 161/343 (46%), Positives = 235/343 (68%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K S+ +LF + +A + L +KK+GF++CGI+ GL GF+ ANG + G Sbjct: 1 MKKTMIASLAAAGMLFAVAGQAHAGTTLDAVKKKGFVQCGISDGLPGFSYADANGKFTGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D SK++Y PL AKERF ALQS ++D+LSRNT WT R+ +G++F Sbjct: 61 DVDVCRGVAAAVFGDDSKVKYTPLTAKERFTALQSGEVDMLSRNTTWTSSRDAGMGMSFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + +GD +W++ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDEDWFS 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GI+ KN+++ + + PD+ LG + + G+ L L W Y I Sbjct: 241 IVRWTLFAMLNAEEMGISSKNVDEKAAKPSTPDMAHLLGTE--GDFGKDLKLDNKWAYHI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 IKQVGNYAEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341 >gi|148557994|ref|YP_001257868.1| amino acid ABC transporter periplasmic amino acid-binding protein [Brucella ovis ATCC 25840] gi|225629405|ref|ZP_03787438.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella ceti str. Cudo] gi|225686709|ref|YP_002734681.1| amino-acid ABC transporter-binding protein yhdW [Brucella melitensis ATCC 23457] gi|254705588|ref|ZP_05167416.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella pinnipedialis M163/99/10] gi|254710821|ref|ZP_05172632.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella pinnipedialis B2/94] gi|256015709|ref|YP_003105718.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella microti CCM 4915] gi|256043818|ref|ZP_05446739.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella melitensis bv. 1 str. Rev.1] gi|256058889|ref|ZP_05449103.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella neotomae 5K33] gi|256157396|ref|ZP_05455314.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella ceti M490/95/1] gi|256253625|ref|ZP_05459161.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella ceti B1/94] gi|256262158|ref|ZP_05464690.1| solute-binding protein/glutamate receptor [Brucella melitensis bv. 2 str. 63/9] gi|260167705|ref|ZP_05754516.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella sp. F5/99] gi|260564999|ref|ZP_05835484.1| solute-binding protein/glutamate receptor [Brucella melitensis bv. 1 str. 16M] gi|261220761|ref|ZP_05935042.1| extracellular solute-binding protein [Brucella ceti B1/94] gi|261312993|ref|ZP_05952190.1| extracellular solute-binding protein family 3 [Brucella pinnipedialis M163/99/10] gi|261318389|ref|ZP_05957586.1| extracellular solute-binding protein family 3 [Brucella pinnipedialis B2/94] gi|261322825|ref|ZP_05962022.1| extracellular solute-binding protein [Brucella neotomae 5K33] gi|261757141|ref|ZP_06000850.1| solute-binding protein/glutamate receptor [Brucella sp. F5/99] gi|265990242|ref|ZP_06102799.1| extracellular solute-binding protein family 3 [Brucella melitensis bv. 1 str. Rev.1] gi|265995884|ref|ZP_06108441.1| extracellular solute-binding protein [Brucella ceti M490/95/1] gi|294853902|ref|ZP_06794574.1| general L-amino acid transport system substrate-binding protein [Brucella sp. NVSL 07-0026] gi|148369279|gb|ABQ62151.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella ovis ATCC 25840] gi|225615901|gb|EEH12950.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella ceti str. Cudo] gi|225642814|gb|ACO02727.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella melitensis ATCC 23457] gi|255998369|gb|ACU50056.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella microti CCM 4915] gi|260152642|gb|EEW87735.1| solute-binding protein/glutamate receptor [Brucella melitensis bv. 1 str. 16M] gi|260919345|gb|EEX85998.1| extracellular solute-binding protein [Brucella ceti B1/94] gi|261297612|gb|EEY01109.1| extracellular solute-binding protein family 3 [Brucella pinnipedialis B2/94] gi|261298805|gb|EEY02302.1| extracellular solute-binding protein [Brucella neotomae 5K33] gi|261302019|gb|EEY05516.1| extracellular solute-binding protein family 3 [Brucella pinnipedialis M163/99/10] gi|261737125|gb|EEY25121.1| solute-binding protein/glutamate receptor [Brucella sp. F5/99] gi|262550181|gb|EEZ06342.1| extracellular solute-binding protein [Brucella ceti M490/95/1] gi|263000911|gb|EEZ13601.1| extracellular solute-binding protein family 3 [Brucella melitensis bv. 1 str. Rev.1] gi|263091858|gb|EEZ16180.1| solute-binding protein/glutamate receptor [Brucella melitensis bv. 2 str. 63/9] gi|294819557|gb|EFG36557.1| general L-amino acid transport system substrate-binding protein [Brucella sp. NVSL 07-0026] gi|326411105|gb|ADZ68169.1| amino-acid ABC transporter-binding protein yhdW [Brucella melitensis M28] gi|326554396|gb|ADZ89035.1| amino-acid ABC transporter-binding protein yhdW [Brucella melitensis M5-90] Length = 339 Score = 360 bits (924), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 166/342 (48%), Positives = 227/342 (66%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++L A L +K+RG + CG++ G+ GF+ G W GFD Sbjct: 1 MKKTVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDQGKWTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS +D+LSR T WTL R+ +G+ F Sbjct: 61 IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVG 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+DGQGF++ K G+ S +L GASIC + GTTTE +ADYF AHN+KY P+V + + Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSAD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 I A+ RCD YT D SALYA +L P +++LP++ISK PL PA+ QGD +W+NI Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +A++ AEELGITQK + D+ PD++RFLG + + G+ LGL W Y I+ Sbjct: 241 VRWTLFALLEAEELGITQKTV-AADLDSRKPDIRRFLGSEGDN--GQQLGLEPKWAYNIV 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGEMF+R +G S LKI RG NALW+KGGLMYAPP++ Sbjct: 298 ASVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339 >gi|254700150|ref|ZP_05161978.1| hypothetical protein Bsuib55_04721 [Brucella suis bv. 5 str. 513] gi|261750642|ref|ZP_05994351.1| extracellular solute-binding protein family 3 [Brucella suis bv. 5 str. 513] gi|261740395|gb|EEY28321.1| extracellular solute-binding protein family 3 [Brucella suis bv. 5 str. 513] Length = 339 Score = 360 bits (924), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 166/342 (48%), Positives = 227/342 (66%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++L A L +K+RG + CG++ G+ GF+ G W GFD Sbjct: 1 MKKAVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDQGKWTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS +D+LSR T WTL R+ +G+ F Sbjct: 61 IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGAVDLLSRQTTWTLSRDAGMGIHFVG 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+DGQGF++ K G+ S +L GASIC + GTTTE +ADYF AHN+KY P+V + + Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSAD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 I A+ RCD YT D SALYA +L P +++LP++ISK PL PA+ QGD +W+NI Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +A++ AEELGITQK + D+ PD++RFLG + + G+ LGL W Y I+ Sbjct: 241 VRWTLFALLEAEELGITQKTV-AADLDSRKPDIRRFLGSEGDN--GQQLGLEPKWAYNIV 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGEMF+R +G S LKI RG NALW+KGGLMYAPP++ Sbjct: 298 ASVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339 >gi|23500674|ref|NP_700114.1| amino acid ABC transporter periplasmic amino acid-binding protein [Brucella suis 1330] gi|163845062|ref|YP_001622717.1| hypothetical protein BSUIS_B0940 [Brucella suis ATCC 23445] gi|23464321|gb|AAN34119.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella suis 1330] gi|163675785|gb|ABY39895.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] Length = 339 Score = 360 bits (924), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 166/342 (48%), Positives = 227/342 (66%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++L A L +K+RG + CG++ G+ GF+ G W GFD Sbjct: 1 MKKAVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDQGKWTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS +D+LSR T WTL R+ +G+ F Sbjct: 61 IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVG 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+DGQGF++ K G+ S +L GASIC + GTTTE +ADYF AHN+KY P+V + + Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSAD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 I A+ RCD YT D SALYA +L P +++LP++ISK PL PA+ QGD +W+NI Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +A++ AEELGITQK + D+ PD++RFLG + + G+ LGL W Y I+ Sbjct: 241 VRWTLFALLEAEELGITQKTV-AADLDSRKPDIRRFLGSEGDN--GQQLGLEPKWAYNIV 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGEMF+R +G S LKI RG NALW+KGGLMYAPP++ Sbjct: 298 ASVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339 >gi|51245286|ref|YP_065170.1| amino acid ABC transporter, periplasmic substrate-binding protein [Desulfotalea psychrophila LSv54] gi|50876323|emb|CAG36163.1| probable amino acid ABC transporter, periplasmic substrate-binding protein [Desulfotalea psychrophila LSv54] Length = 339 Score = 360 bits (924), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 162/322 (50%), Positives = 231/322 (71%), Gaps = 3/322 (0%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + +A+ L +K++G++ G++ ++GF+ + G W+G DVDF RA++SAIFDDP+K ++ Sbjct: 21 TVSATTLDVVKEKGYVNAGVSGKVIGFSAPDSQGVWRGMDVDFVRAVASAIFDDPNKARF 80 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 P+ KE F ALQS +I+IL+RNT WT R+ LGL F ++DGQGF++HK G+ S Sbjct: 81 TPVAFKEAFAALQSGEIEILARNTTWTFQRDTKLGLEFVGPLFYDGQGFLVHKDLGVKSA 140 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 +L GAS+C Q+GTTTEL +ADYF +H M Y P+V+E +E Y RCD YT D SA Sbjct: 141 LELDGASVCTQSGTTTELNMADYFASHGMTYLPVVYESADEATVIYDTGRCDVYTTDSSA 200 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L A + P +H ILP+IISK PL PA+ QGD +W ++V WT +A++T EELGIT +N Sbjct: 201 LAARRTILSNPDDHEILPEIISKEPLGPAVRQGDQQWSDLVRWTLFALITGEELGITSEN 260 Query: 261 INQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSEL 320 ++Q+ + N +V+RFLG+D S+ G+ +GL+ DW YRII+H+GNY E+F+RN+G+Q+ L Sbjct: 261 VDQMLT-SENTEVKRFLGVD--SDFGQHIGLSHDWAYRIIKHVGNYSEVFERNVGSQTAL 317 Query: 321 KIPRGYNALWSKGGLMYAPPIR 342 + RG NALW+ GGLMYAPPIR Sbjct: 318 GLDRGLNALWTNGGLMYAPPIR 339 >gi|161621000|ref|YP_001594886.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella canis ATCC 23365] gi|260567799|ref|ZP_05838268.1| solute-binding protein/glutamate receptor [Brucella suis bv. 4 str. 40] gi|161337811|gb|ABX64115.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella canis ATCC 23365] gi|260154464|gb|EEW89545.1| solute-binding protein/glutamate receptor [Brucella suis bv. 4 str. 40] Length = 339 Score = 360 bits (923), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 166/342 (48%), Positives = 227/342 (66%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++L A L +K+RG + CG++ G+ GF+ G W GFD Sbjct: 1 MKKAVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDRGKWTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS +D+LSR T WTL R+ +G+ F Sbjct: 61 IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVG 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+DGQGF++ K G+ S +L GASIC + GTTTE +ADYF AHN+KY P+V + + Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSAD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 I A+ RCD YT D SALYA +L P +++LP++ISK PL PA+ QGD +W+NI Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +A++ AEELGITQK + D+ PD++RFLG + + G+ LGL W Y I+ Sbjct: 241 VRWTLFALLEAEELGITQKTV-AADLDSRKPDIRRFLGSEGDN--GQQLGLEPKWAYNIV 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGEMF+R +G S LKI RG NALW+KGGLMYAPP++ Sbjct: 298 ASVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339 >gi|192293640|ref|YP_001994245.1| extracellular solute-binding protein family 3 [Rhodopseudomonas palustris TIE-1] gi|192287389|gb|ACF03770.1| extracellular solute-binding protein family 3 [Rhodopseudomonas palustris TIE-1] Length = 344 Score = 360 bits (923), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 162/311 (52%), Positives = 225/311 (72%), Gaps = 6/311 (1%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 +R + CG+N GL GF+ G+W GFDVDFCRA+++AIFDDP+K+Q++PL+A ERF Sbjct: 40 RRDAVLCGVNKGLPGFSTPDDKGNWTGFDVDFCRAVAAAIFDDPTKVQFVPLDANERFKE 99 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151 LQS+++DILSRN+ W++ RE + L F + Y+DGQGF++ + I S +L G+ +CVQ Sbjct: 100 LQSRKVDILSRNSTWSMSRETNYDLYFPAVAYYDGQGFMVPASRKIDSAVELDGSKVCVQ 159 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 GTTT+L LADYF+ +NMKY + E+ +++ AY+ +CD +T D+S LYAL+ T ++ Sbjct: 160 NGTTTQLNLADYFRTNNMKYQEVKSEKFDDVVKAYKDGQCDTFTADVSQLYALRKTFEKS 219 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 +H+ILPD+ISK PLAP + Q D +W IV WT YAM+ AEELGIT +NI + K + P Sbjct: 220 GDHIILPDVISKEPLAPVVRQRDDDWMMIVKWTLYAMINAEELGITSQNIGEALK-SKKP 278 Query: 272 DVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWS 331 DV R +G + + GE LGL+KDW R+IRH+GNYGE++DRN+G +L IPRG N LWS Sbjct: 279 DVMRLVGTEGA--FGEDLGLSKDWAARVIRHVGNYGEVYDRNVG---KLGIPRGLNQLWS 333 Query: 332 KGGLMYAPPIR 342 GG+ YAPPIR Sbjct: 334 NGGIQYAPPIR 344 >gi|17988694|ref|NP_541327.1| general L-amino acid-binding periplasmic protein AAPJ precursor [Brucella melitensis bv. 1 str. 16M] gi|17984503|gb|AAL53591.1| general l-amino acid-binding periplasmic protein aapj precursor [Brucella melitensis bv. 1 str. 16M] Length = 331 Score = 359 bits (922), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 163/319 (51%), Positives = 221/319 (69%), Gaps = 3/319 (0%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 A L +K+RG + CG++ G+ GF+ G W GFD+DFCRA+S+A+F DP K+ ++PL Sbjct: 16 ADTLSTVKERGKVNCGVSQGVAGFSSPDDQGKWTGFDIDFCRAVSAAVFGDPDKVSFIPL 75 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 + KERF ALQS +D+LSR T WTL R+ +G+ F Y+DGQGF++ K G+ S +L Sbjct: 76 STKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVGTAYYDGQGFMIRKDLGVDSALKL 135 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 GASIC + GTTTE +ADYF AHN+KY P+V + + I A+ RCD YT D SALYA Sbjct: 136 DGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSADGILKAFETGRCDVYTTDASALYA 195 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 +L P +++LP++ISK PL PA+ QGD +W+NIV WT +A++ AEELGITQK + Sbjct: 196 QRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNIVRWTLFALLEAEELGITQKTV-A 254 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 D+ PD++RFLG + + G+ LGL W Y I+ +GNYGEMF+R +G S LKI Sbjct: 255 ADLDSRKPDIRRFLGSEGDN--GQQLGLEPKWAYNIVASVGNYGEMFERTIGEGSLLKIN 312 Query: 324 RGYNALWSKGGLMYAPPIR 342 RG NALW+KGGLMYAPP++ Sbjct: 313 RGINALWNKGGLMYAPPVK 331 >gi|156935788|ref|YP_001439704.1| hypothetical protein ESA_03659 [Cronobacter sakazakii ATCC BAA-894] gi|156534042|gb|ABU78868.1| hypothetical protein ESA_03659 [Cronobacter sakazakii ATCC BAA-894] Length = 341 Score = 359 bits (922), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 158/319 (49%), Positives = 224/319 (70%), Gaps = 2/319 (0%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + L +KK+GF++CGI+ GL GF+ A G + G DVD CR +++A+F D SK++Y PL Sbjct: 25 GATLDSVKKKGFVQCGISDGLPGFSYADAGGKFTGIDVDVCRGVAAAVFGDASKVKYTPL 84 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 AKERF ALQS ++D+LSRNT WT R+ +G++F +TY+DG GF+ H K G+ S +L Sbjct: 85 TAKERFTALQSGEVDVLSRNTTWTSSRDAGMGMSFTGVTYYDGIGFLTHNKAGLKSAKEL 144 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R +E A + RCD D S LYA Sbjct: 145 DGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYA 204 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 L++ P+E ++LP++ISK PL P + +GD EW++IV WT +AM+ AEE+GI KN++ Sbjct: 205 LRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGIDSKNVDA 264 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 + + + PD+ LG K + G+ L L W Y II+ +GNYGE+F+RN+G +S LKI Sbjct: 265 KAANPSTPDMAHLLG--KEGDYGKDLKLDNKWAYNIIKQVGNYGEIFERNVGQESPLKIK 322 Query: 324 RGYNALWSKGGLMYAPPIR 342 RG N LW+KGG+ YAPP+R Sbjct: 323 RGQNNLWNKGGIQYAPPVR 341 >gi|104783492|ref|YP_609990.1| general amino acid ABC transporter periplasmic binding protein [Pseudomonas entomophila L48] gi|95112479|emb|CAK17206.1| general amino acid ABC transporter, periplasmic binding protein [Pseudomonas entomophila L48] Length = 342 Score = 359 bits (921), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 161/324 (49%), Positives = 227/324 (70%), Gaps = 2/324 (0%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 SF+ + L +KK+GF++CG++ GL GF+ A G G D D CRA+++A+F D +K+ Sbjct: 21 SFAQAGATLDAVKKKGFVQCGVSDGLPGFSVPDAQGKIVGIDADVCRAVAAAVFGDATKV 80 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 ++ LNAKERF ALQS ++D+LSRNT WT R+ +GL F +TY+DG GF+ +KK G+S Sbjct: 81 KFSQLNAKERFTALQSGEVDVLSRNTTWTSSRDAGMGLVFAGVTYYDGVGFLANKKLGVS 140 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 S +L GA+IC+QAGTTTEL ++DYF+A+ +KY PI F+ +E + + RCD T D Sbjct: 141 SAKELDGATICIQAGTTTELNVSDYFRANGLKYTPITFDTSDESAKSLESGRCDVLTSDK 200 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 S L+A + P+E+V+LP+ ISK PL P + +GD EW++IV WT +AM+ AEE GIT Sbjct: 201 SQLFAQRSKLAAPTEYVVLPETISKEPLGPVVRKGDEEWFSIVKWTLFAMLNAEEAGITS 260 Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318 KN+ +K T NPDV R LG D G+ L L KDW +I++ +GNYGE+F++NLG + Sbjct: 261 KNVEAEAKSTKNPDVARLLGAD--GEYGKDLKLPKDWVVQIVKQVGNYGEVFEKNLGQST 318 Query: 319 ELKIPRGYNALWSKGGLMYAPPIR 342 +LKI RG NALW+ GG+ YAPP+R Sbjct: 319 DLKIDRGMNALWNNGGIQYAPPVR 342 >gi|254703267|ref|ZP_05165095.1| hypothetical protein Bsuib36_04929 [Brucella suis bv. 3 str. 686] gi|261753898|ref|ZP_05997607.1| extracellular solute-binding protein family 3 [Brucella suis bv. 3 str. 686] gi|261743651|gb|EEY31577.1| extracellular solute-binding protein family 3 [Brucella suis bv. 3 str. 686] Length = 339 Score = 359 bits (921), Expect = 4e-97, Method: Compositional matrix adjust. Identities = 166/342 (48%), Positives = 227/342 (66%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++L A L +K+RG + CG++ G+ GF+ G W GFD Sbjct: 1 MKKAVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDGWGKWTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS +D+LSR T WTL R+ +G+ F Sbjct: 61 IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVG 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+DGQGF++ K G+ S +L GASIC + GTTTE +ADYF AHN+KY P+V + + Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSAD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 I A+ RCD YT D SALYA +L P +++LP++ISK PL PA+ QGD +W+NI Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +A++ AEELGITQK + D+ PD++RFLG + + G+ LGL W Y I+ Sbjct: 241 VRWTLFALLEAEELGITQKTV-AADLDSRKPDIRRFLGSEGDN--GQQLGLEPKWAYNIV 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGEMF+R +G S LKI RG NALW+KGGLMYAPP++ Sbjct: 298 ASVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339 >gi|86751771|ref|YP_488267.1| extracellular solute-binding protein [Rhodopseudomonas palustris HaA2] gi|86574799|gb|ABD09356.1| extracellular solute-binding protein, family 3 [Rhodopseudomonas palustris HaA2] Length = 341 Score = 358 bits (920), Expect = 4e-97, Method: Compositional matrix adjust. Identities = 163/311 (52%), Positives = 226/311 (72%), Gaps = 6/311 (1%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 +R + CG+N GL GF+ G+W GFDVDFCRA+++AIF+DP+K++++PL+A ERF Sbjct: 37 RRDAVLCGVNKGLPGFSTPDEKGNWTGFDVDFCRAVAAAIFNDPNKVKFVPLDANERFKE 96 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151 LQS+++DILSRN+ W++ RE L F + Y+DG+GF++ + I + +L G+ +CVQ Sbjct: 97 LQSRKVDILSRNSTWSMSREAGYELYFPAVAYYDGEGFMVPSSRKIETALELDGSKVCVQ 156 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 AGTTT L LADYF+A+NMKY + F +++E+ AAY + +CD ++ D S LYAL+ T +P Sbjct: 157 AGTTTLLNLADYFRANNMKYQEVKFPKLDEVVAAYNSGQCDTFSADASQLYALRQTLAKP 216 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 +HVILPD+ISK PLAP + Q D EW IV W+ YAM+ AEELG+T NI++ K + P Sbjct: 217 GDHVILPDLISKEPLAPVVRQRDDEWMMIVKWSLYAMINAEELGVTSANIDEALK-SKKP 275 Query: 272 DVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWS 331 DV R +G + + GE LGL+KDW RIIRH+GNYGE++DRN+G +L IPRG N LWS Sbjct: 276 DVMRLVGTEGA--YGEELGLSKDWAARIIRHVGNYGEVYDRNVG---KLGIPRGLNQLWS 330 Query: 332 KGGLMYAPPIR 342 GG+ YAPPIR Sbjct: 331 AGGIQYAPPIR 341 >gi|254712708|ref|ZP_05174519.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella ceti M644/93/1] gi|254715778|ref|ZP_05177589.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella ceti M13/05/1] gi|261217539|ref|ZP_05931820.1| extracellular solute-binding protein family 3 [Brucella ceti M13/05/1] gi|261320414|ref|ZP_05959611.1| extracellular solute-binding protein family 3 [Brucella ceti M644/93/1] gi|260922628|gb|EEX89196.1| extracellular solute-binding protein family 3 [Brucella ceti M13/05/1] gi|261293104|gb|EEX96600.1| extracellular solute-binding protein family 3 [Brucella ceti M644/93/1] Length = 339 Score = 358 bits (920), Expect = 5e-97, Method: Compositional matrix adjust. Identities = 165/342 (48%), Positives = 226/342 (66%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++L A L +K+RG + CG++ G+ GF+ G W GFD Sbjct: 1 MKKTVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDQGKWTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS +D+LSR T WTL R+ +G+ F Sbjct: 61 IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVG 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+DGQGF++ K G+ S +L GASIC + GTTTE +ADYF AHN+KY P+V + + Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSAD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 I A+ RCD YT D SA YA +L P +++LP++ISK PL PA+ QGD +W+NI Sbjct: 181 GILKAFETGRCDVYTTDASAFYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +A++ AEELGITQK + D+ PD++RFLG + + G+ LGL W Y I+ Sbjct: 241 VRWTLFALLEAEELGITQKTV-AADLDSRKPDIRRFLGSEGDN--GQQLGLEPKWAYNIV 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGEMF+R +G S LKI RG NALW+KGGLMYAPP++ Sbjct: 298 ASVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339 >gi|316936277|ref|YP_004111259.1| family 3 extracellular solute-binding protein [Rhodopseudomonas palustris DX-1] gi|315603991|gb|ADU46526.1| extracellular solute-binding protein family 3 [Rhodopseudomonas palustris DX-1] Length = 344 Score = 358 bits (920), Expect = 5e-97, Method: Compositional matrix adjust. Identities = 164/311 (52%), Positives = 223/311 (71%), Gaps = 6/311 (1%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 +R + CG+N GL GFA G+W GFDVDFCRA+++AIFDDP+K+++LPL+A ERF Sbjct: 40 RRDAVLCGVNKGLPGFATPDDKGNWTGFDVDFCRAVAAAIFDDPTKVKFLPLDANERFKE 99 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151 LQS+++DILSRN+ W++ RE + L F + Y+DGQGF++ + I S +L G+ +CVQ Sbjct: 100 LQSRKVDILSRNSTWSMSRETNYELYFPAVAYYDGQGFMVPASRKIDSAVELDGSKVCVQ 159 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 GTTT+L LADYF+ +NM Y + E+ +++ AY+ +CD +T D+S LYAL+ T Sbjct: 160 NGTTTQLNLADYFRTNNMTYQEVKSEKFDDVVKAYKDGQCDTFTADVSQLYALRKTFANA 219 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 +HVILPD+ISK PLAP + Q D +W IV WT YAM+ AEELGIT +NI++ K + P Sbjct: 220 GDHVILPDVISKEPLAPVVRQRDDDWMMIVKWTLYAMINAEELGITSQNIDEALK-SKKP 278 Query: 272 DVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWS 331 DV R +G D + GE LGL+KDW RI+RH+GNYGE++DRN+G +L IPRG N LWS Sbjct: 279 DVMRLVGTDGA--FGEDLGLSKDWAARIVRHVGNYGEVYDRNVG---KLGIPRGLNQLWS 333 Query: 332 KGGLMYAPPIR 342 GG+ YAPPIR Sbjct: 334 NGGIQYAPPIR 344 >gi|312881587|ref|ZP_07741365.1| amino acid ABC transporter amino acid-binding protein [Vibrio caribbenthicus ATCC BAA-2122] gi|309370650|gb|EFP98124.1| amino acid ABC transporter amino acid-binding protein [Vibrio caribbenthicus ATCC BAA-2122] Length = 342 Score = 358 bits (920), Expect = 6e-97, Method: Compositional matrix adjust. Identities = 163/327 (49%), Positives = 228/327 (69%), Gaps = 7/327 (2%) Query: 20 FSTNASILGD----IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 +T+A GD + K+GF+ CG++TGL GF+ + G+W+G DV++C+AL+SA+ D Sbjct: 19 IATHAFAAGDTLDKVTKQGFITCGVSTGLPGFSNPNSKGEWEGIDVEYCQALASAVLGDK 78 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 K++Y+PL AKERF ALQS ++D+LSRNT WTL R+ +LGL F + Y+DGQGF++ K Sbjct: 79 KKVKYVPLTAKERFTALQSGEVDVLSRNTTWTLHRDTALGLNFVGVNYYDGQGFMVKKDL 138 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 G+ S +L GAS+CVQ+GTTTEL LADYF+ MKY P+VF+ + + A RCD T Sbjct: 139 GLKSAKELDGASVCVQSGTTTELNLADYFRNSGMKYRPVVFDTAAQTSKGFDAGRCDVLT 198 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D S LYAL+L P+ +LP+IISK PL P + QGD +W+NI WT AMV AEE G Sbjct: 199 TDQSGLYALRLNLQDPASAQVLPEIISKEPLGPVVRQGDDQWFNIAKWTLAAMVNAEEYG 258 Query: 256 ITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLG 315 I+ KN +++ K + +P+++R LG++ G+ LG+ DW Y+I++ +GNYGE F+R +G Sbjct: 259 ISSKNADEMLK-SKDPNIRRILGVEGPK--GKGLGIRDDWGYQIVKQVGNYGESFERTVG 315 Query: 316 NQSELKIPRGYNALWSKGGLMYAPPIR 342 S L+I RG NALW+ GG MYAPPIR Sbjct: 316 QGSPLQISRGVNALWNAGGFMYAPPIR 342 >gi|258544539|ref|ZP_05704773.1| general amino acid ABC superfamily ATP binding cassette transporter, periplasmic binding protein [Cardiobacterium hominis ATCC 15826] gi|258520221|gb|EEV89080.1| general amino acid ABC superfamily ATP binding cassette transporter, periplasmic binding protein [Cardiobacterium hominis ATCC 15826] Length = 350 Score = 358 bits (919), Expect = 6e-97, Method: Compositional matrix adjust. Identities = 163/353 (46%), Positives = 239/353 (67%), Gaps = 14/353 (3%) Query: 1 MYKDFFVSILCLII----LFFTSF-------STNASILGDIKKRGFLKCGINTGLVGFAE 49 M + F+S C I L FT+ +T A L D+KKRG L+CG+ L GF+ Sbjct: 1 MAQSTFLSTYCENIMKKSLLFTALGLATLVQTTQADTLDDVKKRGELRCGVTQALAGFSV 60 Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 +G W G DVD+CRAL+SAIFDDP K+ + P ++KERF LQS +ID+L+R T WT Sbjct: 61 ADDSGRWTGLDVDYCRALASAIFDDPEKVSFRPTSSKERFTVLQSGEIDVLARVTTWTTS 120 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 R++ + F + Y+DGQGF++ K GI SV +LSGASIC GT+TE +ADYFK++ M Sbjct: 121 RDVDMPFDFIGVNYYDGQGFMVRKDLGIKSVKELSGASICTNTGTSTETNMADYFKSNGM 180 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 +Y P++FE+ EE+ +AY A RCDAY+ D+S LY + +P +H+ILP++ISK PL P Sbjct: 181 EYKPVIFEKSEEVKSAYDAGRCDAYSSDVSGLYVQRKLLAKPDDHIILPEVISKEPLGPL 240 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEAL 289 + Q D + ++ +WTH+ MV AEE G+++ N+ ++ K + NP+++R LG++ +N + L Sbjct: 241 VRQEDPGFKDLAAWTHFCMVNAEEYGVSKANLEEMKK-SDNPNIRRLLGLE--ANGADKL 297 Query: 290 GLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 G+ D+ +II+H+GNYGE +DRN+G S L I RG N LW++GG+M+APP+R Sbjct: 298 GVGADFCAKIIKHVGNYGEAYDRNVGKDSPLNIERGLNRLWNQGGIMFAPPLR 350 >gi|256029203|ref|ZP_05442817.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella pinnipedialis M292/94/1] gi|265986189|ref|ZP_06098746.1| extracellular solute-binding protein family 3 [Brucella pinnipedialis M292/94/1] gi|264658386|gb|EEZ28647.1| extracellular solute-binding protein family 3 [Brucella pinnipedialis M292/94/1] Length = 339 Score = 358 bits (919), Expect = 6e-97, Method: Compositional matrix adjust. Identities = 165/342 (48%), Positives = 226/342 (66%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++L A L +K+RG + CG++ G+ GF+ G W GFD Sbjct: 1 MKKTVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDQGKWTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS +D+LSR T WTL R+ +G+ F Sbjct: 61 IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVG 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+DGQGF++ K G+ S +L GASIC + GTTTE +ADYF AHN+KY P+V + + Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSAD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 I A+ RCD YT D SALY +L P +++LP++ISK PL PA+ QGD +W+NI Sbjct: 181 GILKAFETGRCDVYTTDASALYVQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +A++ AEELGITQK + D+ PD++RFLG + + G+ LGL W Y I+ Sbjct: 241 VRWTLFALLEAEELGITQKTV-AADLDSRKPDIRRFLGSEGDN--GQQLGLEPKWAYNIV 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGEMF+R +G S LKI RG NALW+KGGLMYAPP++ Sbjct: 298 ASVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339 >gi|261819589|ref|YP_003257695.1| extracellular solute-binding protein family 3 [Pectobacterium wasabiae WPP163] gi|261603602|gb|ACX86088.1| extracellular solute-binding protein family 3 [Pectobacterium wasabiae WPP163] Length = 341 Score = 358 bits (918), Expect = 8e-97, Method: Compositional matrix adjust. Identities = 157/319 (49%), Positives = 225/319 (70%), Gaps = 2/319 (0%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + L I+K+GF++CGI+ GL GF+ ANG + G DVD CR +++A+F D +K++Y PL Sbjct: 25 GTTLDAIQKKGFVQCGISDGLPGFSYADANGKYSGIDVDVCRGIAAAVFGDANKVKYSPL 84 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 AKERF ALQS ++D+LSRNT WT R+ +G+ F +TY+DG GF+ H K G++S +L Sbjct: 85 TAKERFTALQSGEVDVLSRNTTWTSSRDGGMGMLFTGVTYYDGIGFLTHNKAGLTSAKEL 144 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 GA++C+QAGT TEL +ADYFK H M+Y P+ F+R +E A + RCD D S LYA Sbjct: 145 DGATVCIQAGTDTELNVADYFKTHKMQYTPVTFDRSDESAKALESGRCDTLASDQSQLYA 204 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 L++ +P+E ++LP++ISK PL P + +GD EW+ IV WT +AM+ AEE+ +T KN++Q Sbjct: 205 LRIKLSKPAEFIVLPEVISKEPLGPVVRRGDEEWFAIVRWTLFAMLNAEEMDVTSKNVDQ 264 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 ++ T PD+ LG + S G+ L L DW ++II+ +GNYGE+F+RN+G SELKI Sbjct: 265 LAAKPTTPDMSHLLGHEGS--YGKDLKLPNDWAFKIIKQVGNYGEIFERNVGMGSELKIK 322 Query: 324 RGYNALWSKGGLMYAPPIR 342 RG N LW+KGG+ YAP +R Sbjct: 323 RGLNELWNKGGIQYAPAVR 341 >gi|283836183|ref|ZP_06355924.1| general amino acid ABC transporter, periplasmic binding protein [Citrobacter youngae ATCC 29220] gi|291067534|gb|EFE05643.1| general amino acid ABC transporter, periplasmic binding protein [Citrobacter youngae ATCC 29220] Length = 341 Score = 357 bits (917), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 157/330 (47%), Positives = 229/330 (69%), Gaps = 2/330 (0%) Query: 13 IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72 ++L + + + L +KK+GF++CGI+ GL GF+ A+G + G DVD CR ++SA+F Sbjct: 14 VLLAIANQAHAGATLDAVKKKGFVQCGISDGLPGFSYADASGKFSGIDVDVCRGVASAVF 73 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 D SK++Y PL AKERF ALQS ++D+LSRNT WT R+ +G++F +TY+DG GF+ H Sbjct: 74 GDDSKVKYTPLTAKERFTALQSGEVDMLSRNTTWTSSRDAGMGMSFTGVTYYDGIGFLTH 133 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R +E A + RCD Sbjct: 134 NKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRSDESAKALESGRCD 193 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 D S LYAL++ P+E ++LP++ISK PL P + +GD EW++IV WT +AM+ AE Sbjct: 194 TLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAE 253 Query: 253 ELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDR 312 E+G+ KN+++ + + PD+ LG K + G+ L L W Y II+ +GNY E+F+R Sbjct: 254 EMGVNSKNVDEKAANPATPDMAHLLG--KEGDYGKDLKLDNKWAYNIIKQVGNYSEIFER 311 Query: 313 NLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 N+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 312 NVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341 >gi|298292513|ref|YP_003694452.1| extracellular solute-binding protein family 3 [Starkeya novella DSM 506] gi|296929024|gb|ADH89833.1| extracellular solute-binding protein family 3 [Starkeya novella DSM 506] Length = 337 Score = 357 bits (917), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 164/328 (50%), Positives = 225/328 (68%), Gaps = 3/328 (0%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 + T+ +A L D+K RG LKCG++ GL GF+ G W GFDVD CRA++SAIFDD Sbjct: 13 IVMTAGLGHADTLADVKARGTLKCGVSQGLAGFSAKDDKGQWSGFDVDLCRAVASAIFDD 72 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 SK++Y+PL+A RF ALQ +ID+LSRN+ WT+ RE L L F ++Y+DGQGF++ Sbjct: 73 ASKVEYVPLSADARFPALQKGEIDLLSRNSTWTMQREADLKLLFAAVSYYDGQGFLVPVA 132 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 K + + +L + +C Q+GTT+ D+FK +NM I V+E+ AY +CD Sbjct: 133 KKVDTALELDKSKVCTQSGTTSVGNAKDFFKQNNMALELIELPTVDEVVKAYDEGKCDVL 192 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 T D+S LYAL+L +P+++++LPD+ISK PL P + QGD W N V W+ YA++ AEEL Sbjct: 193 TTDVSQLYALRLRLAKPADYIVLPDVISKEPLGPVVRQGDDAWLNAVKWSFYALLNAEEL 252 Query: 255 GITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNL 314 GI+Q ++Q K + PDVQRF+G D S GE LGLTKDW RI++++GNYGE+F+RN+ Sbjct: 253 GISQATLDQALK-SQKPDVQRFVGTDGS--YGEQLGLTKDWAVRIVKNVGNYGEVFERNI 309 Query: 315 GNQSELKIPRGYNALWSKGGLMYAPPIR 342 G QS+L IPRG N LWS GG+ YAPPIR Sbjct: 310 GAQSKLGIPRGINQLWSAGGIQYAPPIR 337 >gi|254690732|ref|ZP_05153986.1| Solute-binding protein/glutamate receptor [Brucella abortus bv. 6 str. 870] gi|254695963|ref|ZP_05157791.1| Solute-binding protein/glutamate receptor [Brucella abortus bv. 3 str. Tulya] gi|256255914|ref|ZP_05461450.1| Solute-binding protein/glutamate receptor [Brucella abortus bv. 9 str. C68] gi|260756304|ref|ZP_05868652.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 6 str. 870] gi|260882128|ref|ZP_05893742.1| extracellular solute-binding protein [Brucella abortus bv. 9 str. C68] gi|261216393|ref|ZP_05930674.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 3 str. Tulya] gi|297249275|ref|ZP_06932976.1| general L-amino acid transport system substrate-binding protein [Brucella abortus bv. 5 str. B3196] gi|260676412|gb|EEX63233.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 6 str. 870] gi|260871656|gb|EEX78725.1| extracellular solute-binding protein [Brucella abortus bv. 9 str. C68] gi|260918000|gb|EEX84861.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 3 str. Tulya] gi|297173144|gb|EFH32508.1| general L-amino acid transport system substrate-binding protein [Brucella abortus bv. 5 str. B3196] Length = 339 Score = 357 bits (916), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 165/342 (48%), Positives = 226/342 (66%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++L A L +K+RG + CG++ G+ GF+ G W GFD Sbjct: 1 MKKTVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDQGKWTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS +D+LSR T WTL R+ +G+ F Sbjct: 61 IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVG 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+DGQGF++ K G+ S +L GASIC + GTTTE +ADY AHN+KY P+V + + Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYCGAHNIKYEPVVIDSAD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 I A+ RCD YT D SALYA +L P +++LP++ISK PL PA+ QGD +W+NI Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +A++ AEELGITQK + D+ PD++RFLG + + G+ LGL W Y I+ Sbjct: 241 VRWTLFALLEAEELGITQKTV-AADLDSRKPDIRRFLGSEGDN--GQQLGLEPKWAYNIV 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGEMF+R +G S LKI RG NALW+KGGLMYAPP++ Sbjct: 298 ASVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339 >gi|146343600|ref|YP_001208648.1| general L-amino acid-binding periplasmic protein [Bradyrhizobium sp. ORS278] gi|146196406|emb|CAL80433.1| General L-amino acid-binding periplasmic protein [Bradyrhizobium sp. ORS278] Length = 345 Score = 357 bits (915), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 159/311 (51%), Positives = 224/311 (72%), Gaps = 3/311 (0%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 +RG + CG+N GL GF+ G+W GFDVDFCRA+++AIFDDP K +++PL+A ERF Sbjct: 38 RRGEVLCGVNAGLPGFSIPDDKGNWTGFDVDFCRAVAAAIFDDPKKARFVPLDASERFKE 97 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151 LQS+++DILSRNT W++ RE + L F + Y+DGQGF++ + + + + L+G+ +CVQ Sbjct: 98 LQSRKVDILSRNTTWSMAREQNYDLYFPAVAYYDGQGFMVPRARKLETALDLNGSKVCVQ 157 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 TT L L DYF+A+NMKY + +++++ AY + +CD +T D+S LYAL+L +P Sbjct: 158 DSTTNALNLGDYFRANNMKYEEVKLPKLDDVLKAYDSGKCDTFTADVSQLYALRLVLTKP 217 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 +H ILPD+ISK PLAP + Q D +W IV WT YAM+ AEELG+T KNI++ K + P Sbjct: 218 GDHDILPDLISKEPLAPVVRQRDDDWMMIVKWTLYAMINAEELGVTSKNIDEALK-SKKP 276 Query: 272 DVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWS 331 DV R +G G+ LGL+KDW RIIRH+GNYGE+++RN+G++S+LKIPRG N LW+ Sbjct: 277 DVMRLVG--NEGTYGQDLGLSKDWAARIIRHVGNYGEVYERNVGSESKLKIPRGMNQLWN 334 Query: 332 KGGLMYAPPIR 342 GG+ YAPPIR Sbjct: 335 AGGIQYAPPIR 345 >gi|319957434|ref|YP_004168697.1| amino acid ABC transporter substrate-binding protein, paat family [Nitratifractor salsuginis DSM 16511] gi|319419838|gb|ADV46948.1| amino acid ABC transporter substrate-binding protein, PAAT family [Nitratifractor salsuginis DSM 16511] Length = 338 Score = 357 bits (915), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 159/314 (50%), Positives = 225/314 (71%), Gaps = 2/314 (0%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 D+KK G LKCG+NTGL GF+E + G W+G DVD+CRAL++ + D SK++Y+PLNAKER Sbjct: 27 DVKKAGILKCGVNTGLPGFSEADSKGQWRGLDVDYCRALAAVVLGDASKVKYVPLNAKER 86 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 F ALQS +ID+LSRNT T R+ SLG+ F + Y+DGQGF++ K G+ S +L GA++ Sbjct: 87 FTALQSGEIDVLSRNTTNTETRDTSLGINFTGVMYYDGQGFMVPKSLGVKSAKELDGATV 146 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 C+QAGTTTEL LADYF+A++MK+ I F+ +++ A+ A RCD T D S LYA + Sbjct: 147 CIQAGTTTELNLADYFRANHMKFKAITFDTNDQVTKAFEAGRCDVLTTDASGLYATRTKL 206 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 P ++V+LP+IISK PLAPA+ GD +W++I WT A++TAEE GIT N+++ + Sbjct: 207 ANPEKYVVLPEIISKEPLAPAVRHGDDQWFDIAKWTRNALLTAEEKGITMANVDEAKAKS 266 Query: 269 TNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNA 328 T+P+V+R L ++ + + L L K Y I+ +GNYGE+F+RN+G ++ LKI RG NA Sbjct: 267 TDPEVKRLLSVE--GKMCDNLKLEKGCFYNAIKQVGNYGEIFERNVGVKTPLKIQRGLNA 324 Query: 329 LWSKGGLMYAPPIR 342 LW++GGL Y+PP R Sbjct: 325 LWTQGGLQYSPPFR 338 >gi|70728430|ref|YP_258179.1| general amino acid ABC transporter periplasmic binding protein [Pseudomonas fluorescens Pf-5] gi|68342729|gb|AAY90335.1| general amino acid ABC transporter, periplasmic binding protein [Pseudomonas fluorescens Pf-5] Length = 342 Score = 357 bits (915), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 159/342 (46%), Positives = 230/342 (67%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ +L + F+ + L ++K+GF++CG++ GL GF+ A G G D Sbjct: 3 MLKSTLAAVTAATVLGMSGFAQAGATLDAVQKKGFVQCGVSDGLPGFSVPDATGKILGID 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D CRA+++A+F D +K+++ LNAKERF ALQS +ID+LSRNT WT R+ +GL F Sbjct: 63 ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDVLSRNTTWTSSRDAGMGLVFAG 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DG GF+++KK G+ S +L GA+IC+QAGTTTEL ++DYF+ + +KY PI F+ + Sbjct: 123 VTYYDGIGFLVNKKLGVKSAKELDGATICIQAGTTTELNVSDYFRGNGLKYTPITFDTSD 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + + RCD T D S LYA + P+++V+LP+ ISK PL P + +GD EW++I Sbjct: 183 ESAKSLESGRCDVLTSDKSQLYAQRSKLATPTDYVVLPETISKEPLGPVVRKGDEEWFSI 242 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEE G+T KN+ +K T NPDV R LG D G+ L L KDW +I+ Sbjct: 243 VKWTLFAMLNAEEAGVTSKNVEAEAKSTKNPDVARLLGAD--GEYGKDLKLPKDWVVQIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F++NLG + L I RG NALW+ GG+ YAPP+R Sbjct: 301 KQVGNYGEVFEKNLGKSTPLAIDRGLNALWNNGGIQYAPPVR 342 >gi|332163168|ref|YP_004299745.1| ABC transporter periplasmic solute-binding protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318603946|emb|CBY25444.1| glutamate Aspartate periplasmic binding protein precursor GltI [Yersinia enterocolitica subsp. palearctica Y11] gi|325667398|gb|ADZ44042.1| ABC transporter periplasmic solute-binding protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 341 Score = 357 bits (915), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 157/319 (49%), Positives = 221/319 (69%), Gaps = 2/319 (0%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + L +KK+GF++CGI+ GL GF+ A+G + G DVD CR +++AIF D K++Y PL Sbjct: 25 GTTLDAVKKKGFVQCGISDGLPGFSYADASGKFSGLDVDICRGVAAAIFGDAEKVKYTPL 84 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 AKERF ALQS ++DILSRNT WT R+ +G+ F + Y+DG GF+ H K G+ S +L Sbjct: 85 TAKERFTALQSGEVDILSRNTTWTSSRDAGMGMLFTGVNYYDGIGFLTHNKAGLKSAKEL 144 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 GA++C+QAGT TEL +ADYFKA+ M+Y P+ F+R +E A + RCD D S LYA Sbjct: 145 DGATVCIQAGTDTELNVADYFKANKMQYTPVTFDRSDESAKALDSGRCDTLASDQSQLYA 204 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 L++ +P E ++LP++ISK PL P + +GD +W+ IV WT +AM+ AEE+G+T KN+ + Sbjct: 205 LRIKLGKPDEFIVLPEVISKEPLGPVVRRGDEDWFAIVRWTLFAMLNAEEMGVTSKNVEE 264 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 ++ T PD+ LG + N G+ L + DW +I++ +GNYGE FDRN+G SELKI Sbjct: 265 LAAKPTTPDMAHLLG--QEGNYGKDLKVPNDWVVKIVKQVGNYGESFDRNVGMGSELKIK 322 Query: 324 RGYNALWSKGGLMYAPPIR 342 RG NALW+ GGL YAPP+R Sbjct: 323 RGQNALWNNGGLQYAPPVR 341 >gi|209695504|ref|YP_002263433.1| general L-amino acid-binding periplasmic protein precursor [Aliivibrio salmonicida LFI1238] gi|208009456|emb|CAQ79742.1| general L-amino acid-binding periplasmic protein precursor [Aliivibrio salmonicida LFI1238] Length = 342 Score = 357 bits (915), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 163/338 (48%), Positives = 230/338 (68%), Gaps = 3/338 (0%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F +I L T + L + K G+L+CG++TGL GF+ + G+W+G DV++C Sbjct: 8 LFAAIATSAALLSTQATAADGTLEKVVKNGYLQCGVSTGLPGFSNPNSKGEWEGIDVEYC 67 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 +A+++A+ D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ SLGL F + Y+ Sbjct: 68 QAVAAAVLGDKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTSLGLNFVGVNYY 127 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 DGQGF++ K+ G++S +L GAS+CVQ+GTTTEL LADYF+ ++M+Y P+VF+ + Sbjct: 128 DGQGFMVKKELGLTSAKELDGASVCVQSGTTTELNLADYFRNNSMEYKPVVFDTAAQTSK 187 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + A RCD T D S LYAL+L P ILP+IISK PL P + QGD +W+NI W Sbjct: 188 GFDAGRCDVLTTDQSGLYALRLNLKDPKTAQILPEIISKEPLGPVVRQGDDKWFNINKWV 247 Query: 245 HYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMG 304 AM+ AEE GIT N +Q+ K + +P+++R LG+D G+ LG+ DW Y++I+ +G Sbjct: 248 LSAMINAEEYGITSANADQMLK-SKDPNIKRILGVDGPK--GKGLGIRDDWGYQVIKQVG 304 Query: 305 NYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 NYGE F+R +G S L+I RG NALW+ GG MYA PIR Sbjct: 305 NYGESFERTVGTGSPLQISRGVNALWNAGGFMYAAPIR 342 >gi|123444011|ref|YP_001007981.1| ABC transporter periplasmic solute-binding protein [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122090972|emb|CAL13855.1| Putative ABC transporter periplasmic solute binding protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 341 Score = 357 bits (915), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 157/319 (49%), Positives = 221/319 (69%), Gaps = 2/319 (0%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + L +KK+GF++CGI+ GL GF+ A+G + G DVD CR +++AIF D K++Y PL Sbjct: 25 GTTLDAVKKKGFVQCGISDGLPGFSYADASGKFSGLDVDVCRGVAAAIFGDAEKVKYTPL 84 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 AKERF ALQS ++DILSRNT WT R+ +G+ F + Y+DG GF+ H K G+ S +L Sbjct: 85 TAKERFTALQSGEVDILSRNTTWTSSRDAGMGMLFTGVNYYDGIGFLTHNKAGLKSAKEL 144 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 GA++C+QAGT TEL +ADYFKA+ M+Y P+ F+R +E A + RCD D S LYA Sbjct: 145 DGATVCIQAGTDTELNVADYFKANKMQYTPVTFDRSDESAKALDSGRCDTLASDQSQLYA 204 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 L++ +P E ++LP++ISK PL P + +GD +W+ IV WT +AM+ AEE+G+T KN+ + Sbjct: 205 LRIKLGKPDEFIVLPEVISKEPLGPVVRRGDEDWFAIVRWTLFAMLNAEEMGVTSKNVEE 264 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 ++ T PD+ LG + N G+ L + DW +I++ +GNYGE FDRN+G SELKI Sbjct: 265 LAAKPTTPDMAHLLG--QEGNYGKDLKVPNDWVVKIVKQVGNYGESFDRNVGMGSELKIK 322 Query: 324 RGYNALWSKGGLMYAPPIR 342 RG NALW+ GGL YAPP+R Sbjct: 323 RGQNALWNNGGLQYAPPVR 341 >gi|238789893|ref|ZP_04633673.1| Extracellular solute-binding protein, family 3 [Yersinia frederiksenii ATCC 33641] gi|238721966|gb|EEQ13626.1| Extracellular solute-binding protein, family 3 [Yersinia frederiksenii ATCC 33641] Length = 341 Score = 356 bits (914), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 157/319 (49%), Positives = 221/319 (69%), Gaps = 2/319 (0%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + L +KK+GF++CGI+ GL GF+ A+G + G DVD CR +++AIF D K++Y PL Sbjct: 25 GTTLDAVKKKGFVQCGISDGLPGFSYADASGKFSGLDVDVCRGVAAAIFGDAEKVKYTPL 84 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 AKERF ALQS ++DILSRNT WT R+ +G+ F + Y+DG GF+ H K G+ S +L Sbjct: 85 TAKERFTALQSGEVDILSRNTTWTSSRDAGMGMLFTGVNYYDGIGFLTHNKAGLKSAKEL 144 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 GA++C+QAGT TEL +ADYFKA+ M+Y P+ F+R +E A + RCD D S LYA Sbjct: 145 DGATVCIQAGTDTELNVADYFKANKMQYTPVTFDRSDESAKALDSGRCDTLASDQSQLYA 204 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 L++ +P E ++LP++ISK PL P + +GD +W+ IV WT +AM+ AEE+G+T KN+ Sbjct: 205 LRIKLGKPDEFIVLPEVISKEPLGPVVRRGDEDWFAIVRWTLFAMLNAEEMGVTSKNVEA 264 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 ++ + PD+ LG + N G+ L + DW +I++ +GNYGE FDRN+G SELKI Sbjct: 265 LAAKPSTPDMAHLLG--QEGNYGKDLKVPNDWVVKIVKQVGNYGESFDRNVGMGSELKIK 322 Query: 324 RGYNALWSKGGLMYAPPIR 342 RG NALW+KGGL YAPP+R Sbjct: 323 RGQNALWNKGGLQYAPPVR 341 >gi|330862829|emb|CBX72970.1| putative amino-acid ABC transporter-binding protein yhdW [Yersinia enterocolitica W22703] Length = 341 Score = 356 bits (914), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 157/319 (49%), Positives = 221/319 (69%), Gaps = 2/319 (0%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + L +KK+GF++CGI+ GL GF+ A+G + G DVD CR +++AIF D K++Y PL Sbjct: 25 GTTLDAVKKKGFVQCGISDGLPGFSYADASGKFSGIDVDICRGVAAAIFGDAEKVKYTPL 84 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 AKERF ALQS ++DILSRNT WT R+ +G+ F + Y+DG GF+ H K G+ S +L Sbjct: 85 TAKERFTALQSGEVDILSRNTTWTSSRDAGMGMLFTGVNYYDGIGFLTHNKAGLKSAKEL 144 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 GA++C+QAGT TEL +ADYFKA+ M+Y P+ F+R +E A + RCD D S LYA Sbjct: 145 DGATVCIQAGTDTELNVADYFKANKMQYTPVTFDRSDESAKALDSGRCDTLASDQSQLYA 204 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 L++ +P E ++LP++ISK PL P + +GD +W+ IV WT +AM+ AEE+G+T KN+ + Sbjct: 205 LRIKLGKPDEFIVLPEVISKEPLGPVVRRGDEDWFAIVRWTLFAMLNAEEMGVTSKNVEE 264 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 ++ T PD+ LG + N G+ L + DW +I++ +GNYGE FDRN+G SELKI Sbjct: 265 LAAKPTTPDMAHLLG--QEGNYGKDLKVPNDWVVKIVKQVGNYGESFDRNVGMGSELKIK 322 Query: 324 RGYNALWSKGGLMYAPPIR 342 RG NALW+ GGL YAPP+R Sbjct: 323 RGQNALWNNGGLQYAPPVR 341 >gi|238782940|ref|ZP_04626968.1| Extracellular solute-binding protein, family 3 [Yersinia bercovieri ATCC 43970] gi|238716143|gb|EEQ08127.1| Extracellular solute-binding protein, family 3 [Yersinia bercovieri ATCC 43970] Length = 341 Score = 356 bits (913), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 158/319 (49%), Positives = 220/319 (68%), Gaps = 2/319 (0%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + L +KK+GF++CGI+ GL GF+ A+G + G DVD CR +++AIF D K++Y PL Sbjct: 25 GTTLDAVKKKGFVQCGISDGLPGFSYADASGKFSGLDVDVCRGVAAAIFGDAEKVKYTPL 84 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 AKERF ALQS ++DILSRNT WT R+ +G+ F + Y+DG GF+ H K G+ S +L Sbjct: 85 TAKERFTALQSGEVDILSRNTTWTSSRDAGMGMLFTGVNYYDGIGFLTHNKAGLKSAKEL 144 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 GA++C+QAGT TEL +ADYFKA+ M+Y P+ F+R +E A + RCD D S LYA Sbjct: 145 DGATVCIQAGTDTELNVADYFKANKMQYTPVTFDRSDESAKALDSGRCDTLASDQSQLYA 204 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 L++ +P E ++LP++ISK PL P + +GD +W+ IV WT +AM+ AEE+G+T KN+ Sbjct: 205 LRIKLGKPDEFIVLPEVISKEPLGPVVRRGDEDWFAIVRWTLFAMLNAEEMGVTSKNVEA 264 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 ++ T PD+ LG + N G+ L + DW +I++ +GNYGE FDRN+G SELKI Sbjct: 265 LAAKPTTPDMAHLLG--QEGNYGKDLKVPNDWVVKIVKQVGNYGESFDRNVGMGSELKIK 322 Query: 324 RGYNALWSKGGLMYAPPIR 342 RG NALW+ GGL YAPPIR Sbjct: 323 RGQNALWNSGGLQYAPPIR 341 >gi|311695087|gb|ADP97960.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [marine bacterium HP15] Length = 347 Score = 355 bits (912), Expect = 4e-96, Method: Compositional matrix adjust. Identities = 163/340 (47%), Positives = 232/340 (68%), Gaps = 3/340 (0%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K + I + F + + A+ L ++K++G L+CG+ +GL GF++ G+W G DVD Sbjct: 11 KSIALGIALAVGTFSATGAMAATTLENVKEKGHLQCGVTSGLPGFSQPDEKGNWTGIDVD 70 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 CRA+++AIF D + +++ PL AKERF ALQS +ID+LSRNT WTL R+ SLGL F + Sbjct: 71 TCRAVAAAIFGDANAVEFTPLTAKERFTALQSGEIDMLSRNTTWTLTRDASLGLNFAGVN 130 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y+DGQGF+++K G+ +QL GA+IC+QAGTTTEL L+DYF+A M++ PIVF+ E+ Sbjct: 131 YYDGQGFLINKGIGVDDATQLDGATICIQAGTTTELNLSDYFRAKGMEFKPIVFDTSEQT 190 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + A RCD T D S L AL+ PS ILP+ ISK PL P + QGD +W+NIV Sbjct: 191 VQGFAAGRCDVLTSDRSQLAALRSKLSDPSSAKILPNTISKEPLGPVVRQGDDQWFNIVK 250 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302 W +A + AEELG+T N + + K + NP++QR LG D ++G LGL D+ Y+ ++ Sbjct: 251 WVLFAQINAEELGVTSANADDMLK-SDNPNIQRLLGTD--GDMGAKLGLPDDFGYQAVKL 307 Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGEM+DRN+G + L + RG NALW++GG+MYAPP+R Sbjct: 308 VGNYGEMYDRNVGPDTPLGLDRGINALWTEGGIMYAPPVR 347 >gi|330808961|ref|YP_004353423.1| putative amino acid ABC transporter, periplasmic component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327377069|gb|AEA68419.1| putative amino acid ABC transporter, periplasmic component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 346 Score = 355 bits (912), Expect = 5e-96, Method: Compositional matrix adjust. Identities = 161/336 (47%), Positives = 233/336 (69%), Gaps = 3/336 (0%) Query: 8 SILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 ++ CL + + + +A + L ++KK+GF++CGI+ GL GF+ A G++ GFDVD CRA Sbjct: 13 TVACLTLGSVFAITAHAGATLDNVKKKGFVQCGISDGLPGFSYADAKGEFHGFDVDVCRA 72 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 +++A+F D K++Y L AKERF ALQS ++D+LSR+T WT R+ ++G+ F + Y+DG Sbjct: 73 VAAAVFGDAKKVKYTQLTAKERFTALQSGEVDMLSRSTTWTSSRDGAMGIQFTNVAYYDG 132 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 QGF+++KK G+ S +L GA+ C+QAGT TEL L+DYF+++ MKY PI F+ +E A Sbjct: 133 QGFLVNKKLGVKSARELDGATFCIQAGTVTELNLSDYFRSNGMKYTPITFDTSDESFKAL 192 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + RCD T D S LY +L P + +LPD+ISK PL PA+ +GD +W+ +V W+ Sbjct: 193 ESGRCDVLTTDQSQLYGQRLKLATPDDFAVLPDVISKEPLTPAVRRGDEDWFTVVRWSLA 252 Query: 247 AMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNY 306 AM+ AEELGIT KN+ + K + NPD+ R LG + + +G+ L L DW +II +GNY Sbjct: 253 AMLNAEELGITSKNVADMVKSSKNPDIARLLGTEGA--LGKDLNLPNDWAAKIIAQVGNY 310 Query: 307 GEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GE F+RNLG S++KI RG NALWS+GGL YAPP+R Sbjct: 311 GESFERNLGTGSDMKIKRGLNALWSQGGLQYAPPVR 346 >gi|229592512|ref|YP_002874631.1| putative ABC transporter periplasmic solute binding protein [Pseudomonas fluorescens SBW25] gi|229364378|emb|CAY52154.1| Putative ABC transport system, periplasmic solute binding protein [Pseudomonas fluorescens SBW25] Length = 342 Score = 355 bits (911), Expect = 5e-96, Method: Compositional matrix adjust. Identities = 161/341 (47%), Positives = 227/341 (66%), Gaps = 2/341 (0%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 +K +I L S + L I+K+GF++CG++ GL GF +NG G DV Sbjct: 4 FKTTLAAIGATAALGLASTAQAGVTLDAIQKKGFIQCGVSDGLPGFGVPDSNGKMTGIDV 63 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D C A+++A+F D SK+++ L AKERF ALQS +ID++SRNT WT R+ +GL F + Sbjct: 64 DVCHAVAAAVFGDASKVKFTQLTAKERFTALQSGEIDMISRNTTWTSSRDSGMGLVFTGV 123 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 TY+DG GF+++ K G++ QL GA++C+QAGTTTEL ++DYF+ + MKY PI F+ +E Sbjct: 124 TYYDGIGFLVNNKLGVTGAKQLDGATVCIQAGTTTELNVSDYFRTNGMKYTPITFDTADE 183 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A RCD T D S LYA ++ P E V+LP++ISK PL P + +GD EW++IV Sbjct: 184 SAKGLEAGRCDVLTTDQSGLYAQRIKMAHPDEFVVLPEVISKEPLGPLVRKGDDEWFSIV 243 Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301 WT +AM+ AEE+GIT +N+ + +K T NPD+ R LG D G+ L L KDW +I++ Sbjct: 244 KWTLFAMLNAEEMGITSQNVEEQAKTTKNPDIARLLGAD--GEYGKDLKLRKDWVVQIVK 301 Query: 302 HMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGE+F+RN+G S LKI RG NALW+ GG+ YAPP+R Sbjct: 302 QVGNYGEVFERNIGQGSVLKIKRGLNALWNNGGIQYAPPVR 342 >gi|238798512|ref|ZP_04641991.1| Extracellular solute-binding protein, family 3 [Yersinia mollaretii ATCC 43969] gi|238717674|gb|EEQ09511.1| Extracellular solute-binding protein, family 3 [Yersinia mollaretii ATCC 43969] Length = 341 Score = 355 bits (911), Expect = 5e-96, Method: Compositional matrix adjust. Identities = 156/319 (48%), Positives = 220/319 (68%), Gaps = 2/319 (0%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + L +KK+GF++CGI+ GL GF+ A+G + G DVD CR +++AIF D K++Y PL Sbjct: 25 GTTLDAVKKKGFVQCGISDGLPGFSYADASGKFSGLDVDVCRGVAAAIFGDAEKVKYTPL 84 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 AKERF ALQS ++DILSRNT WT R+ +G+ F + Y+DG GF+ H K G+ S +L Sbjct: 85 TAKERFTALQSGEVDILSRNTTWTSSRDAGMGMLFTGVNYYDGIGFLTHNKAGLKSAKEL 144 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 GA++C+QAGT TEL +ADYFKA+ M+Y P+ F+R +E A + RCD D S LYA Sbjct: 145 DGATVCIQAGTDTELNVADYFKANKMQYTPVTFDRSDESAKALDSGRCDTLASDQSQLYA 204 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 L++ +P E ++LP++ISK PL P + +GD +W+ +V WT +AM+ AEE+G+T KN+ Sbjct: 205 LRIKLGKPDEFIVLPEVISKEPLGPVVRRGDEDWFAVVRWTLFAMLNAEEMGVTSKNVEA 264 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 ++ T PD+ LG + N G+ L + DW +I++ +GNYGE FDRN+G SELKI Sbjct: 265 LAAKPTTPDMAHLLG--QEGNYGKDLKVPNDWVVKIVKQVGNYGESFDRNVGMGSELKIK 322 Query: 324 RGYNALWSKGGLMYAPPIR 342 RG NALW+ GGL YAPP+R Sbjct: 323 RGQNALWNNGGLQYAPPVR 341 >gi|312962948|ref|ZP_07777434.1| extracellular solute-binding protein, family 3 [Pseudomonas fluorescens WH6] gi|311282717|gb|EFQ61312.1| extracellular solute-binding protein, family 3 [Pseudomonas fluorescens WH6] Length = 342 Score = 355 bits (911), Expect = 6e-96, Method: Compositional matrix adjust. Identities = 158/340 (46%), Positives = 229/340 (67%), Gaps = 2/340 (0%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K ++ +IL + + L I+K+GF++CG++ GL GF + G G DVD Sbjct: 5 KTSLAAVSVAVILGLAGSAHAGTTLDAIQKKGFIQCGVSDGLPGFGVPDSQGKMTGIDVD 64 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 C A+++A+F D SK+++ L AKERF ALQS +ID++SRNT WT R+ +GL F +T Sbjct: 65 VCHAVAAAVFGDASKVKFTQLTAKERFTALQSGEIDLISRNTTWTSSRDSGMGLVFTGVT 124 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y+DG GF+++ K G+++ QL+GA++C+QAGTTTEL ++DYF+ H MKY PI F+ +E Sbjct: 125 YYDGIGFLVNNKLGVTAAKQLNGATVCIQAGTTTELNVSDYFRTHGMKYTPITFDTADES 184 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A RCD T D S LYA ++ P E V+LP++ISK PL P + +GD EW++IV Sbjct: 185 AKGLEAGRCDVLTTDQSGLYAQRIKMAHPEEFVVLPEVISKEPLGPLVRKGDDEWFSIVK 244 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302 WT +AM+ AEE+GIT +N+ + ++ + NPDV R LG D G+ L L +DW +I++ Sbjct: 245 WTLFAMLNAEEMGITSQNVEEQARTSKNPDVARLLGAD--GEYGKDLKLRRDWVVQIVKQ 302 Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGE+F+RN+G S LKI RG NALW+ GG+ YAPP+R Sbjct: 303 VGNYGEVFERNIGQGSVLKIKRGLNALWNNGGIQYAPPVR 342 >gi|197336291|ref|YP_002156345.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio fischeri MJ11] gi|197317781|gb|ACH67228.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio fischeri MJ11] Length = 342 Score = 355 bits (911), Expect = 6e-96, Method: Compositional matrix adjust. Identities = 159/316 (50%), Positives = 225/316 (71%), Gaps = 3/316 (0%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L ++K G+L+CG++TGL GF+ + G+W+G DV+FC+A+++A+ D SK++Y+PL AK Sbjct: 30 LEKVQKNGYLQCGVSTGLPGFSNPNSKGEWEGIDVEFCQAVAAAVLGDKSKVKYVPLTAK 89 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 ERF ALQS +ID+LSRNT WTL R+ SLGL F + Y+DGQGF++ K+ G++S +L GA Sbjct: 90 ERFTALQSGEIDVLSRNTTWTLHRDTSLGLNFVGVNYYDGQGFMVKKELGLTSAKELDGA 149 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 S+CVQ+GTTTEL LADYF+ +NM+Y P+VF+ + + A RCD T D S LYAL+L Sbjct: 150 SVCVQSGTTTELNLADYFRNNNMEYKPVVFDTAAQTSKGFDAGRCDVLTTDQSGLYALRL 209 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 P +LP+IISK PL P + QGD +W+NI W AM+ AEE I+ KN +Q+ K Sbjct: 210 NLKDPKTAQVLPEIISKEPLGPVVRQGDDQWFNINKWVLNAMINAEEYDISSKNADQMLK 269 Query: 267 DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGY 326 + +P+++R LG+D G+ LG+ DW Y++++ +GNYGE F+R +G S L+I RG Sbjct: 270 -SKDPNIKRILGVDGPK--GKGLGIRDDWGYQVVKQVGNYGESFERTVGEGSPLQISRGV 326 Query: 327 NALWSKGGLMYAPPIR 342 NALW+ GG MYA PIR Sbjct: 327 NALWNAGGFMYAAPIR 342 >gi|26988032|ref|NP_743457.1| general amino acid ABC transporter, periplasmic binding protein [Pseudomonas putida KT2440] gi|24982752|gb|AAN66921.1|AE016320_9 general amino acid ABC transporter, periplasmic binding protein [Pseudomonas putida KT2440] Length = 342 Score = 355 bits (910), Expect = 7e-96, Method: Compositional matrix adjust. Identities = 159/324 (49%), Positives = 227/324 (70%), Gaps = 2/324 (0%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 S + + L +KK+GF++CG++ GL GF+ A G G D D CRA+++A+F D +K+ Sbjct: 21 STAQAGATLDAVKKKGFVQCGVSDGLPGFSVPDAQGKIVGIDADVCRAVAAAVFGDATKV 80 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 ++ LNAKERF ALQS ++D+LSRNT WT R+ +GL F +TY+DG GF+++KK G+S Sbjct: 81 KFSQLNAKERFTALQSGEVDVLSRNTTWTSSRDAGMGLVFAGVTYYDGVGFLVNKKLGVS 140 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 S +L GA+IC+QAGTTTEL ++D+F+A+ +KY PI F+ +E + + RCD T D Sbjct: 141 SAKELDGATICIQAGTTTELNVSDFFRANGLKYTPITFDTSDESAKSLESGRCDVLTSDK 200 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 S L+A + P+E+V+LP+ ISK PL P + +GD EW++IV WT +AM+ AEE GIT Sbjct: 201 SQLFAQRSKLAAPTEYVVLPETISKEPLGPVVRKGDEEWFSIVKWTLFAMLNAEEAGITS 260 Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318 KN+ +K T NPDV R LG D G+ L L KDW +I++ +GNYGE+F++NLG + Sbjct: 261 KNVEAEAKATKNPDVARLLGAD--GEYGKDLKLPKDWVVQIVKQVGNYGEVFEKNLGQST 318 Query: 319 ELKIPRGYNALWSKGGLMYAPPIR 342 +LKI RG NALW+ GG+ YAPP+R Sbjct: 319 DLKIDRGMNALWNNGGIQYAPPVR 342 >gi|296533466|ref|ZP_06896047.1| cationic amino acid ABC superfamily ATP binding cassette transporter, periplasmic binding protein [Roseomonas cervicalis ATCC 49957] gi|296266210|gb|EFH12254.1| cationic amino acid ABC superfamily ATP binding cassette transporter, periplasmic binding protein [Roseomonas cervicalis ATCC 49957] Length = 350 Score = 355 bits (910), Expect = 8e-96, Method: Compositional matrix adjust. Identities = 162/319 (50%), Positives = 221/319 (69%), Gaps = 5/319 (1%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 ++ L IK RG L CG+NTGL GFA+ + G W GFDV++CRAL+ A+F+D SK++Y+P Sbjct: 37 SATLDAIKARGTLSCGVNTGLAGFAQPDSQGRWTGFDVEYCRALAVALFNDASKVRYVPT 96 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 A+ RF ALQS +ID+L RNT TL R+ SLGL F I ++DGQGF++ G+ S +L Sbjct: 97 TAQNRFTALQSGEIDVLPRNTTATLSRDTSLGLDFPAINFYDGQGFMVKASLGVKSAKEL 156 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 GA++CVQ GTTTE L D+F+A+N+++ P++ ER+EE+ +AY A RCDAYT D+S L A Sbjct: 157 DGATVCVQPGTTTEQNLTDWFRANNIRFTPVIIERLEELVSAYVAGRCDAYTTDVSGLAA 216 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 + P EHVILP++ISK PL PA+ GD W ++V WTHYA++ AEE GIT N+++ Sbjct: 217 TRSAQPNPGEHVILPEVISKEPLGPAVRHGDQRWADLVRWTHYALLAAEEFGITAANVDK 276 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 + P+VQR LG K+ +G+ LG+ W RII+ GNYGEMF R+L + L I Sbjct: 277 AVAEDQRPEVQRLLG--KTGGLGQMLGVDNAWAARIIKATGNYGEMFTRHL---TPLGIQ 331 Query: 324 RGYNALWSKGGLMYAPPIR 342 RG NA W++GGL YA P R Sbjct: 332 RGPNAQWTQGGLQYAQPFR 350 >gi|27376134|ref|NP_767663.1| amino acid binding protein [Bradyrhizobium japonicum USDA 110] gi|27349273|dbj|BAC46288.1| bll1023 [Bradyrhizobium japonicum USDA 110] Length = 345 Score = 354 bits (909), Expect = 8e-96, Method: Compositional matrix adjust. Identities = 155/311 (49%), Positives = 227/311 (72%), Gaps = 3/311 (0%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 +RG + CG+N GL GF+ G+W GFDVDFCRA+++AIF+DP+K +++ L+A ERF Sbjct: 38 RRGEVLCGVNKGLPGFSIPDDKGNWTGFDVDFCRAVAAAIFNDPAKAKFVALDASERFKE 97 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151 LQS+++DILSRN+ W++ RE+ L F + Y+DG GF++ + + + L+G+ +CVQ Sbjct: 98 LQSRKVDILSRNSTWSMARELDYDLYFPAVAYYDGAGFMLPRSRNKETSLDLTGSKVCVQ 157 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 GTTT L ++DYF+A+NMKY + F++++++ AY +CD + D+S LYAL+L +P Sbjct: 158 TGTTTALNVSDYFRANNMKYEEVKFDKLDDVVKAYDTGKCDTLSADVSQLYALRLNLSKP 217 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 +H+ILPD+ISK PLAP + Q D +W IV WT YAM+ AEELG++ +NI++ K + P Sbjct: 218 GDHMILPDMISKEPLAPVVRQRDDDWMMIVKWTLYAMINAEELGVSSENIDEALK-SKKP 276 Query: 272 DVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWS 331 +V R +G + N GE LGLTKDW RIIR++GNYGEM++RN+G +S+LKIPRG N LW+ Sbjct: 277 EVMRLVGTE--GNYGEQLGLTKDWVVRIIRNVGNYGEMYERNIGEKSKLKIPRGMNQLWN 334 Query: 332 KGGLMYAPPIR 342 GG+ YAPP+R Sbjct: 335 AGGVQYAPPMR 345 >gi|300817474|ref|ZP_07097690.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 107-1] gi|300824982|ref|ZP_07105081.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 119-7] gi|331670093|ref|ZP_08370938.1| putative amino-acid ABC transporter-binding protein YhdW [Escherichia coli TA271] gi|331679342|ref|ZP_08380014.1| putative amino-acid ABC transporter-binding protein YhdW [Escherichia coli H591] gi|300522548|gb|EFK43617.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 119-7] gi|300529772|gb|EFK50834.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 107-1] gi|331063006|gb|EGI34920.1| putative amino-acid ABC transporter-binding protein YhdW [Escherichia coli TA271] gi|331073407|gb|EGI44730.1| putative amino-acid ABC transporter-binding protein YhdW [Escherichia coli H591] Length = 341 Score = 354 bits (909), Expect = 9e-96, Method: Compositional matrix adjust. Identities = 155/319 (48%), Positives = 225/319 (70%), Gaps = 2/319 (0%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + L ++K+GF++CGI+ GL GF+ A+G + G DVD CR +++A+F D +K++Y PL Sbjct: 25 GATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGIDVDVCRGVAAAVFGDDTKVKYTPL 84 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 AKERF ALQS ++D+LSRNT WT R+ +G+AF +TY+DG GF+ H K G+ S +L Sbjct: 85 TAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKEL 144 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R +E A + RCD D S LYA Sbjct: 145 DGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYA 204 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 L++ P+E ++LP++ISK PL PA+ +GD EW++IV WT +AM+ AEE+GI +N+++ Sbjct: 205 LRIKLSNPAEWIVLPEVISKEPLGPAVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDE 264 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 + + PD+ LG K + G+ L L W Y II+ +GNY E+F+RN+G++S LKI Sbjct: 265 KAANPATPDMAHLLG--KEGDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIK 322 Query: 324 RGYNALWSKGGLMYAPPIR 342 RG N LW+ GG+ YAPP+R Sbjct: 323 RGQNNLWNNGGIQYAPPVR 341 >gi|238794642|ref|ZP_04638248.1| Extracellular solute-binding protein, family 3 [Yersinia intermedia ATCC 29909] gi|238726031|gb|EEQ17579.1| Extracellular solute-binding protein, family 3 [Yersinia intermedia ATCC 29909] Length = 341 Score = 354 bits (909), Expect = 9e-96, Method: Compositional matrix adjust. Identities = 156/319 (48%), Positives = 220/319 (68%), Gaps = 2/319 (0%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + L +KK+GF++CGI+ GL GF+ A+G + G DVD CR +++A+F D K++Y PL Sbjct: 25 GTTLDAVKKKGFVQCGISDGLPGFSYADASGKFSGLDVDVCRGVAAAVFGDAEKVKYTPL 84 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 AKERF ALQS ++DILSRNT WT R+ +G+ F + Y+DG GF+ H K G+ S +L Sbjct: 85 TAKERFTALQSGEVDILSRNTTWTSSRDAGMGMLFTGVNYYDGIGFLTHNKAGLKSAKEL 144 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 GA++C+QAGT TEL +ADYFKA+ M+Y P+ F+R +E A + RCD D S LYA Sbjct: 145 DGATVCIQAGTDTELNVADYFKANKMQYTPVTFDRSDESAKALDSGRCDTLASDQSQLYA 204 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 L++ +P E ++LP++ISK PL P + +GD +W+ IV WT +AM+ AEE+G+T KN+ Sbjct: 205 LRIKLGKPDEFIVLPEVISKEPLGPVVRRGDEDWFAIVRWTLFAMLNAEEMGVTSKNVEA 264 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 ++ T PD+ LG + N G+ L + DW +I++ +GNYGE FDRN+G SELKI Sbjct: 265 LAAKPTTPDMAHLLG--QEGNYGKDLKVPNDWVVKIVKQVGNYGESFDRNVGLGSELKIK 322 Query: 324 RGYNALWSKGGLMYAPPIR 342 RG NALW+ GGL YAPP+R Sbjct: 323 RGQNALWNNGGLQYAPPVR 341 >gi|15599053|ref|NP_252547.1| amino acid-binding protein [Pseudomonas aeruginosa PAO1] gi|218889858|ref|YP_002438722.1| putative amino acid-binding protein [Pseudomonas aeruginosa LESB58] gi|254236763|ref|ZP_04930086.1| hypothetical protein PACG_02773 [Pseudomonas aeruginosa C3719] gi|254242550|ref|ZP_04935872.1| hypothetical protein PA2G_03302 [Pseudomonas aeruginosa 2192] gi|9950036|gb|AAG07245.1|AE004803_1 probable amino acid-binding protein [Pseudomonas aeruginosa PAO1] gi|126168694|gb|EAZ54205.1| hypothetical protein PACG_02773 [Pseudomonas aeruginosa C3719] gi|126195928|gb|EAZ59991.1| hypothetical protein PA2G_03302 [Pseudomonas aeruginosa 2192] gi|218770081|emb|CAW25843.1| probable amino acid-binding protein [Pseudomonas aeruginosa LESB58] Length = 341 Score = 354 bits (909), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 156/334 (46%), Positives = 235/334 (70%), Gaps = 2/334 (0%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 +L + L ++ + + L +K++G+++CG++ GL GF+ A G +KG DVD CRAL+ Sbjct: 10 LLAAVCLGASATAEAGATLDAVKRKGYVQCGVSDGLPGFSYADAKGRFKGLDVDICRALA 69 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 +A+F D K+++ PL+A ERF ALQS +D+LSRNT WT R+ +LG+ F +TYFDGQG Sbjct: 70 AALFGDAEKVRFTPLSATERFSALQSGTVDLLSRNTSWTSSRDTALGIHFTGVTYFDGQG 129 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 F++++K G+SS +L A++C+Q+GTT EL +ADYF+AH ++Y ++ + E+ A A Sbjct: 130 FLVNRKLGVSSARELKDATVCIQSGTTNELNVADYFRAHGIRYKAVLDDSYEKSARALEA 189 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 +CD + D S LYA +L +P ++V+LP++ISK PL PA+ QGD W+NIV WT Y + Sbjct: 190 GQCDVLSSDQSQLYAQRLKLAKPEQYVVLPEVISKEPLGPAVRQGDEAWFNIVRWTLYGL 249 Query: 249 VTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGE 308 + AEELG+T N+ + ++D+ NPDV R LG + + G+ L L +DW +++R +GNYGE Sbjct: 250 LNAEELGVTSSNVERQARDSRNPDVARLLGSE--GDAGKDLQLPRDWVVQMVRQVGNYGE 307 Query: 309 MFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +F RN+G+ S LK+PRG NA W+ GGL YAPPIR Sbjct: 308 IFARNVGDGSPLKMPRGLNAQWNLGGLHYAPPIR 341 >gi|59712139|ref|YP_204915.1| general L-amino acid-binding protein [Vibrio fischeri ES114] gi|59480240|gb|AAW86027.1| general L-amino acid-binding protein [Vibrio fischeri ES114] Length = 342 Score = 354 bits (909), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 158/316 (50%), Positives = 225/316 (71%), Gaps = 3/316 (0%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L ++K G+L+CG++TGL GF+ + G+W+G DV+FC+A+++A+ D SK++Y+PL AK Sbjct: 30 LEKVQKNGYLQCGVSTGLPGFSNPNSKGEWEGIDVEFCQAVAAAVLGDKSKVKYVPLTAK 89 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 ERF ALQS +ID+LSRNT WTL R+ SLGL F + Y+DGQGF++ K+ G++S +L GA Sbjct: 90 ERFTALQSGEIDVLSRNTTWTLHRDTSLGLNFVGVNYYDGQGFMVKKELGLTSAKELDGA 149 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 S+CVQ+GTTTEL LADYF+ +NM+Y P+VF+ + + A RCD T D S LYAL+L Sbjct: 150 SVCVQSGTTTELNLADYFRNNNMEYKPVVFDTAAQTSKGFDAGRCDVLTTDQSGLYALRL 209 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 P +LP+IISK PL P + QGD +W+NI W M+ AEE GI+ KN +Q+ K Sbjct: 210 NLKDPKTAQVLPEIISKEPLGPVVRQGDDQWFNINKWVLNTMINAEEYGISSKNADQMLK 269 Query: 267 DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGY 326 + +P+++R LG+D G+ LG+ DW Y++++ +GNYGE F+R +G S L+I RG Sbjct: 270 -SKDPNIKRILGVDGPK--GKGLGIRDDWGYQVVKQVGNYGESFERTVGEGSPLQISRGV 326 Query: 327 NALWSKGGLMYAPPIR 342 NALW+ GG +YA PIR Sbjct: 327 NALWNAGGFVYAAPIR 342 >gi|300718662|ref|YP_003743465.1| L-amino acid ABC transporter, solute-binding protein [Erwinia billingiae Eb661] gi|299064498|emb|CAX61618.1| L-amino acid ABC transporter, solute-binding protein [Erwinia billingiae Eb661] Length = 341 Score = 354 bits (908), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 159/319 (49%), Positives = 223/319 (69%), Gaps = 2/319 (0%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + L IKK+GF++CGI+ GL GF+ A+G + G DVD CRA ++A+F D +K++Y PL Sbjct: 25 GTTLDAIKKKGFIQCGISDGLPGFSFADASGKFSGIDVDVCRAAAAAVFGDATKVKYTPL 84 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 AKERF ALQS ++DILSRNT WT R+ +G F + Y+DG GF+ H+K G+ S +L Sbjct: 85 TAKERFTALQSGEVDILSRNTTWTSARDGGMGFIFAGVNYYDGIGFLTHQKAGLKSAKEL 144 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 GA++C+QAGT TEL +ADYFKA+NM+Y P+ F+R +E A RCD D S LYA Sbjct: 145 DGATVCIQAGTDTELNVADYFKANNMQYTPVTFDRSDESAKALDTGRCDTLASDQSQLYA 204 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 L++ +P+E ++LP++ISK PL P + +GD +W+ IV W+ YAM+ AEE+GIT N++Q Sbjct: 205 LRIKLGKPNEFIVLPEVISKEPLGPVVRRGDDDWFTIVKWSLYAMLNAEEMGITSANVDQ 264 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 ++ TNPD+ LG + G+ L L W Y I++ +GNY E+FDRN+G S+LKI Sbjct: 265 LAAKPTNPDMAHLLG--SEGDFGKDLKLDNKWAYNIVKQVGNYQEVFDRNVGKDSQLKIA 322 Query: 324 RGYNALWSKGGLMYAPPIR 342 RG NALW+KGG+ YAPP+R Sbjct: 323 RGQNALWNKGGIQYAPPVR 341 >gi|167035543|ref|YP_001670774.1| extracellular solute-binding protein [Pseudomonas putida GB-1] gi|166862031|gb|ABZ00439.1| extracellular solute-binding protein family 3 [Pseudomonas putida GB-1] Length = 342 Score = 354 bits (908), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 158/319 (49%), Positives = 226/319 (70%), Gaps = 2/319 (0%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + L +KK+GF++CG++ GL GF+ A G G D D CRA+++A+F D +K+++ L Sbjct: 26 GATLDAVKKKGFVQCGVSDGLPGFSVPDAQGKIVGIDADVCRAVAAAVFGDATKVKFSQL 85 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 NAKERF ALQS ++D+LSRNT WT R+ +GL F +TY+DG GF+++KK G+SS +L Sbjct: 86 NAKERFTALQSGEVDVLSRNTTWTSSRDAGMGLVFAGVTYYDGVGFLVNKKLGVSSAKEL 145 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 GA+IC+QAGTTTEL ++D+F+A+N+KY PI F+ +E + + RCD T D S L+A Sbjct: 146 DGATICIQAGTTTELNVSDFFRANNLKYTPITFDTSDESAKSLESGRCDVLTSDKSQLFA 205 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 + P+++V+LP+ ISK PL P + +GD EW++IV WT +AM+ AEE GIT KN+ Sbjct: 206 QRSKLAAPTDYVVLPETISKEPLGPVVRKGDEEWFSIVKWTLFAMLNAEEAGITSKNVEA 265 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 +K T NPDV R LG D G+ L L KDW +I++ +GNYGE+F++NLG ++LKI Sbjct: 266 EAKATKNPDVARLLGGD--GEYGKDLKLPKDWVVQIVKQVGNYGEVFEKNLGQSTDLKID 323 Query: 324 RGYNALWSKGGLMYAPPIR 342 RG NALW+ GG+ YAPP+R Sbjct: 324 RGMNALWNNGGIQYAPPVR 342 >gi|152989661|ref|YP_001346638.1| putative amino acid-binding protein [Pseudomonas aeruginosa PA7] gi|150964819|gb|ABR86844.1| probable amino acid-binding protein [Pseudomonas aeruginosa PA7] Length = 341 Score = 354 bits (908), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 153/319 (47%), Positives = 229/319 (71%), Gaps = 2/319 (0%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + L +K++G+L+CG++ GL GF+ A G ++G DVDFCRAL++A+F D K+++ PL Sbjct: 25 GATLDAVKRKGYLQCGVSDGLAGFSYADAKGRYQGLDVDFCRALAAALFGDAGKVRFTPL 84 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 + ERF ALQS +D+LSRNT WT R+ +LG+ F +TYFDGQGF+++++ G+SS +L Sbjct: 85 STTERFSALQSGTVDLLSRNTSWTSARDTALGIHFTGVTYFDGQGFLVNRRLGVSSAREL 144 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 A++C+Q+GTT EL +ADYF+AH ++Y ++ + E+ A A +CD + D S LYA Sbjct: 145 KDATVCIQSGTTNELNVADYFRAHGIRYKAVLDDSYEKSARALEAGQCDVLSSDQSQLYA 204 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 +L +P ++V+LP++ISK PL PA+ QGD W+NIV WT Y ++ AEELG+T N+ + Sbjct: 205 QRLKLAKPEQYVVLPEVISKEPLGPAVRQGDEAWFNIVRWTLYGLLNAEELGVTSSNVER 264 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 ++D+ NPDV R LG + ++G+ L L +DW +++R +GNYGE+F RN+G+ S LK+P Sbjct: 265 QARDSRNPDVARLLGSE--GDVGKDLQLPRDWVVQMVRQVGNYGEIFARNVGDGSPLKMP 322 Query: 324 RGYNALWSKGGLMYAPPIR 342 RG NA W+ GGL YAPPIR Sbjct: 323 RGLNAQWNLGGLHYAPPIR 341 >gi|84394265|ref|ZP_00992991.1| ABC-type amino acid transport, signal transduction system, periplasmic component/domain [Vibrio splendidus 12B01] gi|86148624|ref|ZP_01066906.1| ABC-type amino acid transport, signal transduction systems,periplasmic component/domain [Vibrio sp. MED222] gi|218709394|ref|YP_002417015.1| amino acid ABC transporter [Vibrio splendidus LGP32] gi|84375104|gb|EAP92025.1| ABC-type amino acid transport, signal transduction system, periplasmic component/domain [Vibrio splendidus 12B01] gi|85833580|gb|EAQ51756.1| ABC-type amino acid transport, signal transduction systems,periplasmic component/domain [Vibrio sp. MED222] gi|218322413|emb|CAV18566.1| Amino acid ABC transporter [Vibrio splendidus LGP32] Length = 342 Score = 354 bits (908), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 158/318 (49%), Positives = 223/318 (70%), Gaps = 3/318 (0%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L + +GFL CG++TGL GF+ + G+W+G DV++C+AL++A+ D +K++Y+PL Sbjct: 28 STLDKVTSQGFLTCGVSTGLPGFSNPNSKGEWEGIDVEYCQALAAAVLGDKTKVKYVPLT 87 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 AKERF ALQS +ID+LSRNT WTL R+ +LGL F + Y+DGQGF++ K+ G++S +L Sbjct: 88 AKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVGVNYYDGQGFMVKKELGLTSAQELD 147 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 GAS+CVQ+GTTTEL LADYF+ M Y P+VF+ + + A RCD T D S LYAL Sbjct: 148 GASVCVQSGTTTELNLADYFRNSGMSYKPVVFDTAAQTSKGFDAGRCDVLTTDQSGLYAL 207 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 +L P +LP+IISK PL P + Q D +W+N+ WT AM+ AEE GI+ KN +++ Sbjct: 208 RLNLADPKSAQVLPEIISKEPLGPVVRQDDDKWFNVAKWTLSAMINAEEYGISSKNADEM 267 Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324 K + +P+++R LG+D G+ LG+ DW Y++I+ +GNYGE F+R +G S L+I R Sbjct: 268 LK-SKDPNIKRILGVDGPK--GKGLGIRDDWGYQVIKQVGNYGESFERTVGTGSPLQISR 324 Query: 325 GYNALWSKGGLMYAPPIR 342 G NALW+ GG MYAPPIR Sbjct: 325 GVNALWNAGGFMYAPPIR 342 >gi|238752136|ref|ZP_04613618.1| Extracellular solute-binding protein, family 3 [Yersinia rohdei ATCC 43380] gi|238709609|gb|EEQ01845.1| Extracellular solute-binding protein, family 3 [Yersinia rohdei ATCC 43380] Length = 341 Score = 354 bits (908), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 155/319 (48%), Positives = 222/319 (69%), Gaps = 2/319 (0%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + L +KK+GF++CGI+ GL GF+ A+G + G DVD CRA+++AIF D K++Y PL Sbjct: 25 GTTLDAVKKKGFVQCGISDGLPGFSYADASGKFSGLDVDICRAVAAAIFGDAEKVKYTPL 84 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 AKERF ALQS ++DILSRNT WT R+ +G+ F + Y+DG GF+ H K G+ S +L Sbjct: 85 TAKERFTALQSGEVDILSRNTTWTSSRDAGMGMLFTGVNYYDGIGFLTHNKAGLKSAKEL 144 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 GA++C+QAGT TEL +ADYFKA+ M+Y P+ F+R +E A + RCD D S LYA Sbjct: 145 DGATVCIQAGTDTELNVADYFKANKMQYTPVTFDRSDESAKALDSGRCDTLASDQSQLYA 204 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 L++ +P+E ++LP++ISK PL P + +GD +W+ +V WT +AM+ AEE+G+T +N+ Sbjct: 205 LRIKLGKPTEFIVLPEVISKEPLGPVVRRGDEDWFALVRWTLFAMLNAEEMGVTSQNVEA 264 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 ++ T PD+ LG + N G+ L + DW +I++ +GNYGE F+RN+G SELKI Sbjct: 265 LAAKPTTPDMAHLLG--QEGNYGKDLKVPNDWVVKIVKQVGNYGESFERNVGMGSELKIK 322 Query: 324 RGYNALWSKGGLMYAPPIR 342 RG NALW+ GGL YAPP+R Sbjct: 323 RGQNALWNNGGLQYAPPVR 341 >gi|313109278|ref|ZP_07795246.1| Putative amino-acid ABC transporter binding protein [Pseudomonas aeruginosa 39016] gi|310881748|gb|EFQ40342.1| Putative amino-acid ABC transporter binding protein [Pseudomonas aeruginosa 39016] Length = 341 Score = 354 bits (908), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 156/334 (46%), Positives = 234/334 (70%), Gaps = 2/334 (0%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 +L + L ++ + + L +K++G+++CG++ GL GF+ A G +KG DVD CRAL+ Sbjct: 10 LLAAVCLGASATAEAGATLDAVKRKGYVQCGVSDGLPGFSYADAKGRFKGLDVDICRALA 69 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 +A+F D K+++ PL+A ERF ALQS +D+LSRNT WT R+ +LG+ F +TYFDGQG Sbjct: 70 AALFGDAEKVRFTPLSATERFSALQSGTVDLLSRNTSWTSSRDTALGIHFTGVTYFDGQG 129 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 F++++K G+SS +L A++C+Q+GTT EL +ADYF+AH ++Y ++ + E+ A A Sbjct: 130 FLVNRKLGVSSARELKDATVCIQSGTTNELNVADYFRAHGIRYKAVLDDSYEKSARALEA 189 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 +CD + D S LYA +L +P ++V+LP++ISK PL PA+ QGD W+NIV WT Y + Sbjct: 190 GQCDVLSSDQSQLYAQRLKLAKPDQYVVLPEVISKEPLGPAVRQGDEAWFNIVRWTLYGL 249 Query: 249 VTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGE 308 + AEELG+T N+ + ++D+ NPDV R LG + G+ L L +DW +++R +GNYGE Sbjct: 250 LNAEELGVTSSNVERQARDSRNPDVARLLG--SEGDAGKDLQLPRDWVVQMVRQVGNYGE 307 Query: 309 MFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +F RN+G+ S LK+PRG NA W+ GGL YAPPIR Sbjct: 308 IFARNVGDGSPLKMPRGLNAQWNLGGLHYAPPIR 341 >gi|209883786|ref|YP_002287643.1| general L-amino acid-binding periplasmic protein AapJ [Oligotropha carboxidovorans OM5] gi|209871982|gb|ACI91778.1| general L-amino acid-binding periplasmic protein AapJ [Oligotropha carboxidovorans OM5] Length = 349 Score = 354 bits (908), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 158/311 (50%), Positives = 222/311 (71%), Gaps = 3/311 (0%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 +RG ++CG+N GL GF+ A+G+W GFDVD CRA+++AIFDDP+K+ ++PL+ +RF Sbjct: 42 RRGAVQCGVNAGLPGFSNKDASGNWSGFDVDICRAVAAAIFDDPTKVNFVPLDTNQRFKE 101 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151 LQ++ +DILSRN+ W++ RE+ L F ++Y+DG+GF++ + + + S +L G ICVQ Sbjct: 102 LQNRTVDILSRNSTWSMSREVDYELTFAAVSYYDGEGFMLRRSRNVDSALELGGTRICVQ 161 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 + TTT+L LADYF+A+NM Y + F V ++ AY + +CD T D S LYA +LT +P Sbjct: 162 SDTTTQLNLADYFRANNMTYDEMKFGNVGDLLKAYESGQCDVLTTDTSQLYAYRLTLAKP 221 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 +HVIL DIISK PLAP + Q D +W IV W YAM+ AEELG++ KNI++ K + P Sbjct: 222 DDHVILADIISKEPLAPVVRQRDDQWMLIVKWAVYAMLNAEELGVSSKNIDEALK-SKKP 280 Query: 272 DVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWS 331 DV R +G + S GEALGLT DW R+IRH+GNY E+++RN+G S+L IPRG N LW+ Sbjct: 281 DVMRLVGTEGS--YGEALGLTNDWAARVIRHVGNYSEVYERNVGVSSKLGIPRGLNQLWN 338 Query: 332 KGGLMYAPPIR 342 GG+ YAPPIR Sbjct: 339 AGGIQYAPPIR 349 >gi|107103377|ref|ZP_01367295.1| hypothetical protein PaerPA_01004447 [Pseudomonas aeruginosa PACS2] Length = 338 Score = 354 bits (908), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 156/334 (46%), Positives = 235/334 (70%), Gaps = 2/334 (0%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 +L + L ++ + + L +K++G+++CG++ GL GF+ A G +KG DVD CRAL+ Sbjct: 7 LLAAVCLGASATAEAGATLDAVKRKGYVQCGVSDGLPGFSYADAKGRFKGLDVDICRALA 66 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 +A+F D K+++ PL+A ERF ALQS +D+LSRNT WT R+ +LG+ F +TYFDGQG Sbjct: 67 AALFGDAEKVRFTPLSATERFSALQSGTVDLLSRNTSWTSSRDTALGIHFTGVTYFDGQG 126 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 F++++K G+SS +L A++C+Q+GTT EL +ADYF+AH ++Y ++ + E+ A A Sbjct: 127 FLVNRKLGVSSARELKDATVCIQSGTTNELNVADYFRAHGIRYKAVLDDSYEKSARALEA 186 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 +CD + D S LYA +L +P ++V+LP++ISK PL PA+ QGD W+NIV WT Y + Sbjct: 187 GQCDVLSSDQSQLYAQRLKLAKPEQYVVLPEVISKEPLGPAVRQGDEAWFNIVRWTLYGL 246 Query: 249 VTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGE 308 + AEELG+T N+ + ++D+ NPDV R LG + + G+ L L +DW +++R +GNYGE Sbjct: 247 LNAEELGVTSSNVERQARDSRNPDVARLLGSE--GDAGKDLQLPRDWVVQMVRQVGNYGE 304 Query: 309 MFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +F RN+G+ S LK+PRG NA W+ GGL YAPPIR Sbjct: 305 IFARNVGDGSPLKMPRGLNAQWNLGGLHYAPPIR 338 >gi|283788089|ref|YP_003367954.1| Putative ABC transporter, substrate-binding protein [Citrobacter rodentium ICC168] gi|282951543|emb|CBG91242.1| Putative ABC transporter, substrate-binding protein [Citrobacter rodentium ICC168] Length = 337 Score = 353 bits (907), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 154/330 (46%), Positives = 227/330 (68%), Gaps = 2/330 (0%) Query: 13 IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72 +++ + + + L +KK+GF++CGI+ GL GF+ A+G + G DVD CR +++A+ Sbjct: 10 VLIAVVNQTHAGATLDAVKKKGFVQCGISDGLPGFSYADADGKFSGIDVDVCRGVAAAVL 69 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 D SK++Y PL AKERF ALQS ++D+LSRNT WT R+ +G++F +TY+DG GF+ H Sbjct: 70 GDDSKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMSFTGVTYYDGIGFLTH 129 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R +E A + RCD Sbjct: 130 NKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRSDESAKALESGRCD 189 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 D S LYAL++ P E ++LP++ISK PL P + +GD EW+ IV WT +AM+ AE Sbjct: 190 TLASDQSQLYALRIKLSNPGEWIVLPEVISKEPLGPVVRRGDDEWFAIVRWTLFAMLNAE 249 Query: 253 ELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDR 312 E+G+T KN+++ + + PD+ LG K + G+ L L W Y +I+ +GNY E+F+R Sbjct: 250 EMGVTSKNVDEKAANPATPDMAHLLG--KEGDYGKDLKLDNTWAYNVIKQVGNYAEIFER 307 Query: 313 NLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 N+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 308 NVGSESPLKIERGQNNLWNNGGIQYAPPVR 337 >gi|237730186|ref|ZP_04560667.1| amino acid ABC transporter [Citrobacter sp. 30_2] gi|226908792|gb|EEH94710.1| amino acid ABC transporter [Citrobacter sp. 30_2] Length = 341 Score = 353 bits (907), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 155/319 (48%), Positives = 223/319 (69%), Gaps = 2/319 (0%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + L +KK+GF++CGI+ GL GF+ A+G + G DVD CR ++SA+F D SK++Y PL Sbjct: 25 GATLDAVKKKGFVQCGISDGLPGFSYADASGKFSGIDVDVCRGVASAVFGDDSKVKYTPL 84 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 AKERF ALQS ++D+LSRNT WT R+ +G++F +TY+DG GF+ H K G+ S +L Sbjct: 85 TAKERFTALQSGEVDMLSRNTTWTSSRDAGMGMSFTGVTYYDGIGFLTHNKAGLKSAKEL 144 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 GA++C+QAGT TEL +ADYFKA+ MKY P+ F+R +E A + RCD D S LYA Sbjct: 145 DGATVCIQAGTDTELNVADYFKANKMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYA 204 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 L++ P+E ++LP++ISK PL P + +GD EW++IV WT +AM+ AEE+G+ KN+++ Sbjct: 205 LRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGVNSKNVDE 264 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 + + PD+ LG K + G+ L L W Y II+ +GNY E+F+RN+G++S LKI Sbjct: 265 KAANPATPDMAHLLG--KEGDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIK 322 Query: 324 RGYNALWSKGGLMYAPPIR 342 RG N LW+ GG+ YAPP+R Sbjct: 323 RGQNNLWNNGGIQYAPPVR 341 >gi|62317227|ref|YP_223080.1| amino acid ABC transporter periplasmic amino acid-binding protein [Brucella abortus bv. 1 str. 9-941] gi|83269208|ref|YP_418499.1| glutamate-binding protein [Brucella melitensis biovar Abortus 2308] gi|189022489|ref|YP_001932230.1| Solute-binding protein/glutamate receptor [Brucella abortus S19] gi|237816787|ref|ZP_04595779.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella abortus str. 2308 A] gi|254698509|ref|ZP_05160337.1| Solute-binding protein/glutamate receptor [Brucella abortus bv. 2 str. 86/8/59] gi|254731957|ref|ZP_05190535.1| Solute-binding protein/glutamate receptor [Brucella abortus bv. 4 str. 292] gi|260544464|ref|ZP_05820285.1| solute-binding protein/glutamate receptor [Brucella abortus NCTC 8038] gi|260759731|ref|ZP_05872079.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 4 str. 292] gi|260762971|ref|ZP_05875303.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 2 str. 86/8/59] gi|62197420|gb|AAX75719.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella abortus bv. 1 str. 9-941] gi|82939482|emb|CAJ12452.1| Solute-binding protein/glutamate receptor:Bacterial extracellular solute-binding protein, family 3 [Brucella melitensis biovar Abortus 2308] gi|189021063|gb|ACD73784.1| Solute-binding protein/glutamate receptor [Brucella abortus S19] gi|237787600|gb|EEP61816.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella abortus str. 2308 A] gi|260097735|gb|EEW81609.1| solute-binding protein/glutamate receptor [Brucella abortus NCTC 8038] gi|260670049|gb|EEX56989.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 4 str. 292] gi|260673392|gb|EEX60213.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 2 str. 86/8/59] Length = 339 Score = 353 bits (907), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 164/342 (47%), Positives = 225/342 (65%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++L A L +K+RG + CG++ G+ GF+ G W GFD Sbjct: 1 MKKTVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDQGKWTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS +D+LS T WTL R+ +G+ F Sbjct: 61 IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSCQTTWTLSRDAGMGIHFVG 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+DGQGF++ K G+ S +L GASIC + GTTTE +ADY AHN+KY P+V + + Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYCGAHNIKYEPVVIDSAD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 I A+ RCD YT D SALYA +L P +++LP++ISK PL PA+ QGD +W+NI Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +A++ AEELGITQK + D+ PD++RFLG + + G+ LGL W Y I+ Sbjct: 241 VRWTLFALLEAEELGITQKTV-AADLDSRKPDIRRFLGSEGDN--GQQLGLEPKWAYNIV 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGEMF+R +G S LKI RG NALW+KGGLMYAPP++ Sbjct: 298 ASVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339 >gi|187730695|ref|YP_001881960.1| amino acid ABC transporter periplasmic amino acid-binding protein [Shigella boydii CDC 3083-94] gi|187427687|gb|ACD06961.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Shigella boydii CDC 3083-94] gi|320177109|gb|EFW52125.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Shigella dysenteriae CDC 74-1112] Length = 341 Score = 353 bits (907), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 154/319 (48%), Positives = 225/319 (70%), Gaps = 2/319 (0%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + L ++K+GF++CGI+ GL GF+ A+G + G DVD CR++++A+F D +K++Y PL Sbjct: 25 GATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGIDVDVCRSVAAAVFGDDTKVKYTPL 84 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 AKERF ALQS ++D+LSRNT WT R+ +G+AF +TY+DG GF+ H K G+ S +L Sbjct: 85 TAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKEL 144 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R +E A + RCD D S LYA Sbjct: 145 DGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYA 204 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 L++ P+E ++LP++ISK PL P + +GD EW++IV WT +AM+ AEE+GI +N+++ Sbjct: 205 LRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDE 264 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 + + PD+ LG K + G+ L L W Y II+ +GNY E+F+RN+G++S LKI Sbjct: 265 KAANPATPDMAHLLG--KEGDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIK 322 Query: 324 RGYNALWSKGGLMYAPPIR 342 RG N LW+ GG+ YAPP+R Sbjct: 323 RGQNNLWNNGGIQYAPPVR 341 >gi|317049795|ref|YP_004117443.1| family 3 extracellular solute-binding protein [Pantoea sp. At-9b] gi|316951412|gb|ADU70887.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b] Length = 341 Score = 353 bits (907), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 164/343 (47%), Positives = 232/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K +++ LF + +A + L IKK+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKMMLSTLVAAASLFAVAQQAHAGTTLDAIKKKGFVQCGISDGLPGFSYADASGKFTGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CRA ++A+F D SK++Y PL AKERF ALQS ++DILSRNT WT R+ +G F Sbjct: 61 DVDVCRAAAAAVFGDASKVKYTPLTAKERFTALQSGEVDILSRNTTWTSSRDGGMGFLFA 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Y+DG GF+ HKK G+ S +L GA++C+QAGT TEL +ADYFKA+NM+Y P+ F+R Sbjct: 121 GVNYYDGIGFLTHKKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMQYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ +P E ++LP++ISK PL P + +GD +W+ Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDEFIVLPEVISKEPLGPVVRRGDDDWFT 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV W+ YAM+ AEE+GI KN++Q++ +NPD+ LG + + G+ L L W + I Sbjct: 241 IVKWSLYAMLNAEEMGINSKNVDQLAAKPSNPDMAHLLGAE--GDFGKDLKLDNKWAFNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E FDRN+G S LKI RG NALW++GG+ YAPP+R Sbjct: 299 IKQVGNYQESFDRNVGKDSALKIARGQNALWNQGGIQYAPPVR 341 >gi|149376724|ref|ZP_01894482.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Marinobacter algicola DG893] gi|149358963|gb|EDM47429.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Marinobacter algicola DG893] Length = 343 Score = 353 bits (906), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 162/340 (47%), Positives = 228/340 (67%), Gaps = 3/340 (0%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K V L +F S ++ A+ L +K++G L+CG+ +GL GF++ G+W G DVD Sbjct: 7 KSIAVGAAMLCGVFTASVASAATTLESVKEKGHLQCGVTSGLPGFSQPDDKGNWTGIDVD 66 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 CRA+++AIF D +++ PL AKERF ALQS +ID+LSRNT WTL R+ SLGL F + Sbjct: 67 TCRAVAAAIFGDAKAVEFTPLTAKERFTALQSGEIDMLSRNTTWTLTRDASLGLNFAGVN 126 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y+DGQGF+++K G+ +QL GA++C+QAGTTTEL L+DYF+A M+Y PIVF+ E+ Sbjct: 127 YYDGQGFLVNKGIGVDDATQLDGATVCIQAGTTTELNLSDYFRAKGMEYKPIVFDTSEQT 186 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + + RCD T D S L AL+ P ILP+ ISK PL P + QGD +W+NIV Sbjct: 187 VQGFASGRCDVLTSDRSQLAALRSKLSDPDSAKILPNTISKEPLGPVVRQGDDQWFNIVK 246 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302 W + AEELG+T N++ + K + NP++QR LG D ++G LGL D+ + I+ Sbjct: 247 WVLSVQINAEELGVTSANVDDMLK-SDNPNIQRLLGTD--GDMGAKLGLPADFGAKAIKQ 303 Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGEM+DRN+G + L + RG NALW++GG+MYAPP+R Sbjct: 304 VGNYGEMYDRNVGPDTPLGLERGINALWTEGGVMYAPPVR 343 >gi|293416693|ref|ZP_06659332.1| general L-amino acid transport system substrate-binding protein [Escherichia coli B185] gi|291432049|gb|EFF05032.1| general L-amino acid transport system substrate-binding protein [Escherichia coli B185] Length = 341 Score = 353 bits (906), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 154/319 (48%), Positives = 224/319 (70%), Gaps = 2/319 (0%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + L ++K+GF++CGI+ GL GF+ A+G + G DVD CR +++A+F D +K++Y PL Sbjct: 25 GATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGIDVDICRGVAAAVFGDDTKVKYTPL 84 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 AKERF ALQS ++D+LSRNT WT R+ +G+AF +TY+DG GF+ H K G+ S +L Sbjct: 85 TAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKEL 144 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R +E A + RCD D S LYA Sbjct: 145 DGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYA 204 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 L++ P+E ++LP++ISK PL P + +GD EW++IV WT +AM+ AEE+GI +N+++ Sbjct: 205 LRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDE 264 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 + + PD+ LG K + G+ L L W Y II+ +GNY E+F+RN+G++S LKI Sbjct: 265 KAANPATPDMAHLLG--KEGDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIK 322 Query: 324 RGYNALWSKGGLMYAPPIR 342 RG N LW+ GG+ YAPP+R Sbjct: 323 RGQNNLWNNGGIQYAPPVR 341 >gi|157162750|ref|YP_001460068.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli HS] gi|170018489|ref|YP_001723443.1| extracellular solute-binding protein [Escherichia coli ATCC 8739] gi|170682914|ref|YP_001745538.1| amino acid ABC transporter periplasmic amino acid-binding protein [Escherichia coli SMS-3-5] gi|188493987|ref|ZP_03001257.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli 53638] gi|194440030|ref|ZP_03072087.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli 101-1] gi|253771901|ref|YP_003034732.1| extracellular solute-binding protein family 3 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254038434|ref|ZP_04872492.1| amino acid ABC transporter [Escherichia sp. 1_1_43] gi|256024158|ref|ZP_05438023.1| extracellular solute-binding protein family 3 [Escherichia sp. 4_1_40B] gi|297518104|ref|ZP_06936490.1| extracellular solute-binding protein family 3 [Escherichia coli OP50] gi|300916765|ref|ZP_07133475.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 115-1] gi|300928696|ref|ZP_07144214.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 187-1] gi|300946948|ref|ZP_07161179.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 116-1] gi|300958250|ref|ZP_07170397.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 175-1] gi|301028300|ref|ZP_07191560.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 196-1] gi|301647044|ref|ZP_07246876.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 146-1] gi|307139956|ref|ZP_07499312.1| extracellular solute-binding protein family 3 [Escherichia coli H736] gi|312972463|ref|ZP_07786637.1| general L-amino acid-binding periplasmic protein aapJ [Escherichia coli 1827-70] gi|331643968|ref|ZP_08345099.1| putative amino-acid ABC transporter-binding protein YhdW [Escherichia coli H736] gi|331654867|ref|ZP_08355867.1| putative amino-acid ABC transporter-binding protein YhdW [Escherichia coli M718] gi|157068430|gb|ABV07685.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli HS] gi|169753417|gb|ACA76116.1| extracellular solute-binding protein family 3 [Escherichia coli ATCC 8739] gi|170520632|gb|ACB18810.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli SMS-3-5] gi|188489186|gb|EDU64289.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli 53638] gi|194421034|gb|EDX37064.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli 101-1] gi|226840058|gb|EEH72079.1| amino acid ABC transporter [Escherichia sp. 1_1_43] gi|253322945|gb|ACT27547.1| extracellular solute-binding protein family 3 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|299878643|gb|EFI86854.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 196-1] gi|300315068|gb|EFJ64852.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 175-1] gi|300415951|gb|EFJ99261.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 115-1] gi|300453408|gb|EFK17028.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 116-1] gi|300463285|gb|EFK26778.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 187-1] gi|301074794|gb|EFK89600.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 146-1] gi|310334840|gb|EFQ01045.1| general L-amino acid-binding periplasmic protein aapJ [Escherichia coli 1827-70] gi|315617078|gb|EFU97688.1| general L-amino acid-binding periplasmic protein aapJ [Escherichia coli 3431] gi|323936248|gb|EGB32540.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli E1520] gi|323970317|gb|EGB65587.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli TA007] gi|331037439|gb|EGI09663.1| putative amino-acid ABC transporter-binding protein YhdW [Escherichia coli H736] gi|331048249|gb|EGI20326.1| putative amino-acid ABC transporter-binding protein YhdW [Escherichia coli M718] Length = 341 Score = 353 bits (906), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 154/319 (48%), Positives = 224/319 (70%), Gaps = 2/319 (0%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + L ++K+GF++CGI+ GL GF+ A+G + G DVD CR +++A+F D +K++Y PL Sbjct: 25 GATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGIDVDICRGVAAAVFGDDTKVKYTPL 84 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 AKERF ALQS ++D+LSRNT WT R+ +G+AF +TY+DG GF+ H K G+ S +L Sbjct: 85 TAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKEL 144 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R +E A + RCD D S LYA Sbjct: 145 DGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYA 204 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 L++ P+E ++LP++ISK PL P + +GD EW++IV WT +AM+ AEE+GI +N+++ Sbjct: 205 LRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDE 264 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 + + PD+ LG K + G+ L L W Y II+ +GNY E+F+RN+G++S LKI Sbjct: 265 KAANPATPDMAHLLG--KEGDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIK 322 Query: 324 RGYNALWSKGGLMYAPPIR 342 RG N LW+ GG+ YAPP+R Sbjct: 323 RGQNNLWNNGGIQYAPPVR 341 >gi|313500474|gb|ADR61840.1| AapJ [Pseudomonas putida BIRD-1] Length = 342 Score = 353 bits (906), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 158/324 (48%), Positives = 227/324 (70%), Gaps = 2/324 (0%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 S + + L +KK+GF++CG++ GL GF+ A G G D D CRA+++A+F D +K+ Sbjct: 21 STAQAGATLDAVKKKGFVQCGVSDGLPGFSVPDAQGKIVGIDADVCRAVAAAVFGDATKV 80 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 ++ LNAKERF ALQS ++D+LSRNT WT R+ +GL F +TY+DG GF+++KK G+S Sbjct: 81 KFSQLNAKERFTALQSGEVDVLSRNTTWTSSRDAGMGLVFAGVTYYDGVGFLVNKKLGVS 140 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 S +L GA+IC+QAGTTTEL ++D+F+A+ +KY PI F+ +E + + RCD T D Sbjct: 141 SAKELDGATICIQAGTTTELNVSDFFRANGLKYTPITFDTSDESAKSLESGRCDVLTSDK 200 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 S L+A + P+++V+LP+ ISK PL P + +GD EW++IV WT +AM+ AEE GIT Sbjct: 201 SQLFAQRSKLAAPTDYVVLPETISKEPLGPVVRKGDEEWFSIVKWTLFAMLNAEEAGITS 260 Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318 KN+ +K T NPDV R LG D G+ L L KDW +I++ +GNYGE+F++NLG + Sbjct: 261 KNVEAEAKATKNPDVARLLGAD--GEYGKDLKLPKDWVVQIVKQVGNYGEVFEKNLGQST 318 Query: 319 ELKIPRGYNALWSKGGLMYAPPIR 342 +LKI RG NALW+ GG+ YAPP+R Sbjct: 319 DLKIDRGMNALWNNGGIQYAPPVR 342 >gi|300937395|ref|ZP_07152230.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 21-1] gi|300457569|gb|EFK21062.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 21-1] Length = 354 Score = 353 bits (906), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 154/319 (48%), Positives = 224/319 (70%), Gaps = 2/319 (0%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + L ++K+GF++CGI+ GL GF+ A+G + G DVD CR +++A+F D +K++Y PL Sbjct: 38 GATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGIDVDICRGVAAAVFGDDTKVKYTPL 97 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 AKERF ALQS ++D+LSRNT WT R+ +G+AF +TY+DG GF+ H K G+ S +L Sbjct: 98 TAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKEL 157 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R +E A + RCD D S LYA Sbjct: 158 DGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYA 217 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 L++ P+E ++LP++ISK PL P + +GD EW++IV WT +AM+ AEE+GI +N+++ Sbjct: 218 LRIKLSNPTEWIVLPEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDE 277 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 + + PD+ LG K + G+ L L W Y II+ +GNY E+F+RN+G++S LKI Sbjct: 278 KAANPATPDMAHLLG--KEGDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIK 335 Query: 324 RGYNALWSKGGLMYAPPIR 342 RG N LW+ GG+ YAPP+R Sbjct: 336 RGQNNLWNNGGIQYAPPVR 354 >gi|320202178|gb|EFW76753.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Escherichia coli EC4100B] Length = 341 Score = 353 bits (906), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 154/319 (48%), Positives = 224/319 (70%), Gaps = 2/319 (0%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + L ++K+GF++CGI+ GL GF+ A+G + G DVD CR +++A+F D +K++Y PL Sbjct: 25 GATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGIDVDVCRGVAAAVFGDDTKVKYTPL 84 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 AKERF ALQS ++D+LSRNT WT R+ +G+AF +TY+DG GF+ H K G+ S +L Sbjct: 85 TAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKEL 144 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R +E A + RCD D S LYA Sbjct: 145 DGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYA 204 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 L++ P+E ++LP++ISK PL P + +GD EW++IV WT +AM+ AEE+GI +N+++ Sbjct: 205 LRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDE 264 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 + + PD+ LG K + G+ L L W Y II+ +GNY E+F+RN+G++S LKI Sbjct: 265 KAANPATPDMTHLLG--KEGDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIK 322 Query: 324 RGYNALWSKGGLMYAPPIR 342 RG N LW+ GG+ YAPP+R Sbjct: 323 RGQNNLWNNGGIQYAPPVR 341 >gi|13959721|sp|P45766|YHDW_ECOLI RecName: Full=Putative amino-acid ABC transporter-binding protein yhdW; Flags: Precursor Length = 341 Score = 353 bits (906), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 154/319 (48%), Positives = 224/319 (70%), Gaps = 2/319 (0%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + L ++K+GF++CGI+ GL GF+ A+G + G DVD CR +++A+F D +K++Y PL Sbjct: 25 GATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGIDVDICRGVAAAVFGDDTKVKYTPL 84 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 AKERF ALQS ++D+LSRNT WT R+ +G+AF +TY+DG GF+ H K G+ S +L Sbjct: 85 TAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKEL 144 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R +E A + RCD D S LYA Sbjct: 145 DGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYA 204 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 L++ P+E ++LP++ISK PL P + +GD EW++IV WT +AM+ AEE+GI +N+++ Sbjct: 205 LRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDE 264 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 + + PD+ LG K + G+ L L W Y II+ +GNY E+F+RN+G++S LKI Sbjct: 265 KAANPATPDMAHLLG--KEGDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIK 322 Query: 324 RGYNALWSKGGLMYAPPIR 342 RG N LW+ GG+ YAPP+R Sbjct: 323 RGQNNLWNNGGIQYAPPVR 341 >gi|38704156|ref|NP_312168.2| periplasmic binding transport protein [Escherichia coli O157:H7 str. Sakai] gi|157159268|ref|YP_001464743.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli E24377A] gi|168752394|ref|ZP_02777416.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC4113] gi|168758500|ref|ZP_02783507.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC4401] gi|168764869|ref|ZP_02789876.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC4501] gi|168769134|ref|ZP_02794141.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC4486] gi|168777686|ref|ZP_02802693.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC4196] gi|168783839|ref|ZP_02808846.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC4076] gi|168786163|ref|ZP_02811170.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC869] gi|168802616|ref|ZP_02827623.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC508] gi|191169153|ref|ZP_03030911.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli B7A] gi|193066465|ref|ZP_03047510.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli E22] gi|194430248|ref|ZP_03062745.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli B171] gi|195940012|ref|ZP_03085394.1| putative periplasmic binding transport protein [Escherichia coli O157:H7 str. EC4024] gi|208807576|ref|ZP_03249913.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC4206] gi|208813206|ref|ZP_03254535.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC4045] gi|208820750|ref|ZP_03261070.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC4042] gi|209397538|ref|YP_002272730.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC4115] gi|217326793|ref|ZP_03442876.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. TW14588] gi|254795210|ref|YP_003080047.1| periplasmic-binding component of an ABC superfamily putative amino acid transporter [Escherichia coli O157:H7 str. TW14359] gi|256018818|ref|ZP_05432683.1| periplasmic-binding component of an ABC superfamily predicted amino acid transporter [Shigella sp. D9] gi|260846073|ref|YP_003223851.1| putative periplasmic binding transport protein [Escherichia coli O103:H2 str. 12009] gi|260857395|ref|YP_003231286.1| putative periplasmic binding transport protein [Escherichia coli O26:H11 str. 11368] gi|260870019|ref|YP_003236421.1| putative periplasmic binding transport protein [Escherichia coli O111:H- str. 11128] gi|261228273|ref|ZP_05942554.1| periplasmic-binding component of an ABC superfamily predicted amino acid transporter [Escherichia coli O157:H7 str. FRIK2000] gi|261255131|ref|ZP_05947664.1| putative periplasmic binding transport protein [Escherichia coli O157:H7 str. FRIK966] gi|291284635|ref|YP_003501453.1| putative amino-acid ABC transporter-binding protein yhdW precursor [Escherichia coli O55:H7 str. CB9615] gi|293406870|ref|ZP_06650796.1| amino acid ABC transporter [Escherichia coli FVEC1412] gi|293412637|ref|ZP_06655360.1| conserved hypothetical protein [Escherichia coli B354] gi|293449591|ref|ZP_06664012.1| amino-acid ABC transporter-binding protein yhdW [Escherichia coli B088] gi|298382611|ref|ZP_06992208.1| amino-acid ABC transporter-binding protein yhdW [Escherichia coli FVEC1302] gi|300898040|ref|ZP_07116411.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 198-1] gi|300904464|ref|ZP_07122310.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 84-1] gi|300925986|ref|ZP_07141809.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 182-1] gi|301304263|ref|ZP_07210377.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 124-1] gi|301326288|ref|ZP_07219661.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 78-1] gi|307314974|ref|ZP_07594562.1| extracellular solute-binding protein family 3 [Escherichia coli W] gi|309793849|ref|ZP_07688275.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 145-7] gi|13959662|sp|P58068|YHDW_ECO57 RecName: Full=Putative amino-acid ABC transporter-binding protein yhdW; Flags: Precursor gi|157081298|gb|ABV21006.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli E24377A] gi|187767128|gb|EDU30972.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC4196] gi|188013752|gb|EDU51874.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC4113] gi|188998861|gb|EDU67847.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC4076] gi|189354670|gb|EDU73089.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC4401] gi|189361744|gb|EDU80163.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC4486] gi|189365193|gb|EDU83609.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC4501] gi|189373879|gb|EDU92295.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC869] gi|189375432|gb|EDU93848.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC508] gi|190900795|gb|EDV60586.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli B7A] gi|192925894|gb|EDV80543.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli E22] gi|194411719|gb|EDX28044.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli B171] gi|208727377|gb|EDZ76978.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC4206] gi|208734483|gb|EDZ83170.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC4045] gi|208740873|gb|EDZ88555.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC4042] gi|209158938|gb|ACI36371.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC4115] gi|217319160|gb|EEC27585.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. TW14588] gi|254594610|gb|ACT73971.1| periplasmic-binding component of an ABC superfamily predicted amino acid transporter [Escherichia coli O157:H7 str. TW14359] gi|257756044|dbj|BAI27546.1| putative periplasmic binding transport protein [Escherichia coli O26:H11 str. 11368] gi|257761220|dbj|BAI32717.1| putative periplasmic binding transport protein [Escherichia coli O103:H2 str. 12009] gi|257766375|dbj|BAI37870.1| putative periplasmic binding transport protein [Escherichia coli O111:H- str. 11128] gi|290764508|gb|ADD58469.1| Putative amino-acid ABC transporter-binding protein yhdW precursor [Escherichia coli O55:H7 str. CB9615] gi|291322681|gb|EFE62110.1| amino-acid ABC transporter-binding protein yhdW [Escherichia coli B088] gi|291426876|gb|EFE99908.1| amino acid ABC transporter [Escherichia coli FVEC1412] gi|291469408|gb|EFF11899.1| conserved hypothetical protein [Escherichia coli B354] gi|298277751|gb|EFI19267.1| amino-acid ABC transporter-binding protein yhdW [Escherichia coli FVEC1302] gi|300358259|gb|EFJ74129.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 198-1] gi|300403626|gb|EFJ87164.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 84-1] gi|300417930|gb|EFK01241.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 182-1] gi|300840389|gb|EFK68149.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 124-1] gi|300846989|gb|EFK74749.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 78-1] gi|306905557|gb|EFN36089.1| extracellular solute-binding protein family 3 [Escherichia coli W] gi|308122806|gb|EFO60068.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 145-7] gi|315257196|gb|EFU37164.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 85-1] gi|320181542|gb|EFW56460.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Shigella boydii ATCC 9905] gi|320189617|gb|EFW64276.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Escherichia coli O157:H7 str. EC1212] gi|320639914|gb|EFX09505.1| putative amino-acid ABC transporter-binding protein yhdW precursor [Escherichia coli O157:H7 str. G5101] gi|320645630|gb|EFX14639.1| putative amino-acid ABC transporter-binding protein yhdW precursor [Escherichia coli O157:H- str. 493-89] gi|320650940|gb|EFX19397.1| putative amino-acid ABC transporter-binding protein yhdW precursor [Escherichia coli O157:H- str. H 2687] gi|320656321|gb|EFX24233.1| putative amino-acid ABC transporter-binding protein yhdW precursor [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320662011|gb|EFX29419.1| putative amino-acid ABC transporter-binding protein yhdW precursor [Escherichia coli O55:H7 str. USDA 5905] gi|320666847|gb|EFX33826.1| putative amino-acid ABC transporter-binding protein yhdW precursor [Escherichia coli O157:H7 str. LSU-61] gi|323154488|gb|EFZ40689.1| general L-amino acid-binding periplasmic protein aapJ [Escherichia coli EPECa14] gi|323162953|gb|EFZ48788.1| general L-amino acid-binding periplasmic protein aapJ [Escherichia coli E128010] gi|323173472|gb|EFZ59101.1| general L-amino acid-binding periplasmic protein aapJ [Escherichia coli LT-68] gi|323178551|gb|EFZ64127.1| general L-amino acid-binding periplasmic protein aapJ [Escherichia coli 1180] gi|323183028|gb|EFZ68427.1| general L-amino acid-binding periplasmic protein aapJ [Escherichia coli 1357] gi|323376846|gb|ADX49114.1| extracellular solute-binding protein family 3 [Escherichia coli KO11] gi|323946885|gb|EGB42901.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli H120] gi|324009098|gb|EGB78317.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 57-2] gi|324020751|gb|EGB89970.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 117-3] gi|324119448|gb|EGC13331.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli E1167] gi|326337965|gb|EGD61799.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Escherichia coli O157:H7 str. 1125] gi|326347534|gb|EGD71259.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Escherichia coli O157:H7 str. 1044] gi|332086450|gb|EGI91597.1| general L-amino acid-binding periplasmic protein aapJ [Shigella dysenteriae 155-74] gi|332087261|gb|EGI92394.1| general L-amino acid-binding periplasmic protein aapJ [Shigella boydii 5216-82] gi|332102250|gb|EGJ05596.1| amino acid ABC transporter [Shigella sp. D9] Length = 341 Score = 353 bits (906), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 154/319 (48%), Positives = 224/319 (70%), Gaps = 2/319 (0%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + L ++K+GF++CGI+ GL GF+ A+G + G DVD CR +++A+F D +K++Y PL Sbjct: 25 GATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGIDVDVCRGVAAAVFGDDTKVKYTPL 84 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 AKERF ALQS ++D+LSRNT WT R+ +G+AF +TY+DG GF+ H K G+ S +L Sbjct: 85 TAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKEL 144 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R +E A + RCD D S LYA Sbjct: 145 DGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYA 204 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 L++ P+E ++LP++ISK PL P + +GD EW++IV WT +AM+ AEE+GI +N+++ Sbjct: 205 LRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDE 264 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 + + PD+ LG K + G+ L L W Y II+ +GNY E+F+RN+G++S LKI Sbjct: 265 KAANPATPDMAHLLG--KEGDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIK 322 Query: 324 RGYNALWSKGGLMYAPPIR 342 RG N LW+ GG+ YAPP+R Sbjct: 323 RGQNNLWNNGGIQYAPPVR 341 >gi|91978841|ref|YP_571500.1| extracellular solute-binding protein [Rhodopseudomonas palustris BisB5] gi|91685297|gb|ABE41599.1| extracellular solute-binding protein, family 3 [Rhodopseudomonas palustris BisB5] Length = 341 Score = 353 bits (905), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 161/311 (51%), Positives = 223/311 (71%), Gaps = 6/311 (1%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 +R + CG+N GL GF+ G+W GFDVDFCRA+++AIF+DP+K++++PL+A ERF Sbjct: 37 RRDAVLCGVNKGLPGFSTPDDKGNWSGFDVDFCRAVAAAIFNDPNKVKFVPLDANERFKE 96 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151 LQS+++DILSRN+ W++ RE L F + Y+DGQGF+ + + + +L G+ +CVQ Sbjct: 97 LQSRKVDILSRNSTWSMSRETGYELYFPAVAYYDGQGFMAPAARKVETALELDGSKVCVQ 156 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 GTTT L LAD+F+ +NMKY + F +++E+ +AY+ +CD +T D S LYAL+ T D+P Sbjct: 157 EGTTTLLNLADFFRTNNMKYQEVKFGKLDEVVSAYKNGQCDTFTADASQLYALRQTLDKP 216 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 +HVILPD+ISK PLAP + Q D +W IV WT YAM+ AEELGIT NI++ K + P Sbjct: 217 GDHVILPDLISKEPLAPVVRQRDDDWMMIVKWTLYAMINAEELGITSINIDEALK-SKKP 275 Query: 272 DVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWS 331 DV R +G + + GE LGL KDW RIIRH+GNYGE++DRN+G +L IPRG N LW+ Sbjct: 276 DVMRLVGTEGT--YGEELGLPKDWAARIIRHVGNYGEIYDRNVG---KLGIPRGLNQLWN 330 Query: 332 KGGLMYAPPIR 342 GG+ YAPPIR Sbjct: 331 AGGIQYAPPIR 341 >gi|157148848|ref|YP_001456167.1| hypothetical protein CKO_04681 [Citrobacter koseri ATCC BAA-895] gi|157086053|gb|ABV15731.1| hypothetical protein CKO_04681 [Citrobacter koseri ATCC BAA-895] Length = 341 Score = 353 bits (905), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 157/343 (45%), Positives = 233/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K S+ + +L + +A + L +KK+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKMMIASLAAVGVLLAVANQAHAGATLDAVKKKGFVQCGISDGLPGFSYADASGKFTGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +G++F Sbjct: 61 DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMSFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+ MKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + +GD EW++ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSDPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 +V WT +AM+ AEE+GI +N+++ + + PD+ LG K + G+ L L W Y I Sbjct: 241 VVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLG--KEGDYGKDLKLDNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 IKQVGNYAEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341 >gi|148549630|ref|YP_001269732.1| extracellular solute-binding protein [Pseudomonas putida F1] gi|148513688|gb|ABQ80548.1| extracellular solute-binding protein, family 3 [Pseudomonas putida F1] Length = 342 Score = 353 bits (905), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 158/324 (48%), Positives = 227/324 (70%), Gaps = 2/324 (0%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 S + + L +KK+GF++CG++ GL GF+ A G G D D CRA+++A+F D +K+ Sbjct: 21 STAQAGATLDAVKKKGFVQCGVSDGLPGFSVPDAQGKIVGIDADVCRAVAAAVFRDATKV 80 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 ++ LNAKERF ALQS ++D+LSRNT WT R+ +GL F +TY+DG GF+++KK G+S Sbjct: 81 KFSQLNAKERFTALQSGEVDVLSRNTTWTSSRDAGMGLVFAGVTYYDGVGFLVNKKLGVS 140 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 S +L GA+IC+QAGTTTEL ++D+F+A+ +KY PI F+ +E + + RCD T D Sbjct: 141 SAKELDGATICIQAGTTTELNVSDFFRANGLKYTPITFDTSDESAKSLESGRCDVLTSDK 200 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 S L+A + P+++V+LP+ ISK PL P + +GD EW++IV WT +AM+ AEE GIT Sbjct: 201 SQLFAQRSKLAAPTDYVVLPETISKEPLGPVVRKGDEEWFSIVKWTLFAMLNAEEAGITS 260 Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318 KN+ +K T NPDV R LG D G+ L L KDW +I++ +GNYGE+F++NLG + Sbjct: 261 KNVEAEAKATKNPDVARLLGAD--GEYGKDLKLPKDWVVQIVKQVGNYGEVFEKNLGQST 318 Query: 319 ELKIPRGYNALWSKGGLMYAPPIR 342 +LKI RG NALW+ GG+ YAPP+R Sbjct: 319 DLKIDRGMNALWNNGGIQYAPPVR 342 >gi|148980390|ref|ZP_01816033.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrionales bacterium SWAT-3] gi|145961262|gb|EDK26574.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrionales bacterium SWAT-3] Length = 342 Score = 353 bits (905), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 159/318 (50%), Positives = 223/318 (70%), Gaps = 3/318 (0%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L + +GFL CG++TGL GF+ + G+W+G DV++C+AL++A+ D +K++Y+PL Sbjct: 28 STLDKVTSQGFLTCGVSTGLPGFSNPNSKGEWEGIDVEYCQALAAAVLGDKTKVKYVPLT 87 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 AKERF ALQS +ID+LSRNT WTL R+ +LGL F + Y+DGQGF++ K G++S +L Sbjct: 88 AKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVGVNYYDGQGFMVKKDLGLTSALELD 147 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 GAS+CVQ+GTTTEL LADYF+ + M Y P+VF+ + + A RCD T D S LYAL Sbjct: 148 GASVCVQSGTTTELNLADYFRNNGMSYKPVVFDTAAQTSKGFDAGRCDVLTTDQSGLYAL 207 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 +L P +LP+IISK PL P + Q D +W+N+ WT AMV AEE GI+ KN +++ Sbjct: 208 RLNLADPKSAQVLPEIISKEPLGPVVRQDDDKWFNVAKWTLSAMVNAEEYGISSKNADEM 267 Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324 K + +P+++R LG+D G+ LG+ DW Y++I+ +GNYGE F+R +G S L+I R Sbjct: 268 LK-SKDPNIKRILGVDGPK--GKGLGIRDDWGYQVIKQVGNYGESFERTVGTGSPLQIDR 324 Query: 325 GYNALWSKGGLMYAPPIR 342 G NALW+ GG MYAPPIR Sbjct: 325 GVNALWNAGGFMYAPPIR 342 >gi|153008737|ref|YP_001369952.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC 49188] gi|151560625|gb|ABS14123.1| extracellular solute-binding protein family 3 [Ochrobactrum anthropi ATCC 49188] Length = 339 Score = 353 bits (905), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 164/342 (47%), Positives = 223/342 (65%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K S+L A L +K+RG + CG++ G+ GF+ G W GFD Sbjct: 1 MKKIVLGSLLAAGFAMSAQSGAQADTLSTVKERGKINCGVSQGVAGFSSPDDQGKWTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS +D+LSR T WTL R+ +G+ F Sbjct: 61 IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVG 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+DGQGF++ K GI S +L GAS+C + GTTTE AD+F A+++KY P+V + + Sbjct: 121 TAYYDGQGFMIRKDLGIDSALKLDGASVCTEQGTTTEQNAADFFSANSIKYEPVVIDSAD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 I A+ RCD YT D SALYA +L P +LP++ISK PL PA+ QGD +W+NI Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPDAFTVLPEVISKEPLGPAVRQGDDKWFNI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEELGITQ + + ++ PDV+RFLG + S G+ LGL W Y ++ Sbjct: 241 VRWTLFAMLEAEELGITQASAD-ADLNSKKPDVRRFLGSEGDS--GQQLGLEPKWAYNVV 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGEMF+R +G S LKI RG NALW+KGGLMYAPP++ Sbjct: 298 SKIGNYGEMFERTIGKGSLLKIDRGINALWNKGGLMYAPPVK 339 >gi|307300514|ref|ZP_07580294.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti BL225C] gi|307318379|ref|ZP_07597814.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti AK83] gi|306896061|gb|EFN26812.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti AK83] gi|306904680|gb|EFN35264.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti BL225C] Length = 336 Score = 353 bits (905), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 158/335 (47%), Positives = 234/335 (69%), Gaps = 7/335 (2%) Query: 12 LIILFFTSF----STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 ++ LF T+F + A+ L +K+RG L+CG++ G++GF+ G+W GFD+DFCRA+ Sbjct: 5 ILALFATAFLAGTTAQAATLDVVKQRGELRCGVSQGVLGFSAPDDKGEWSGFDIDFCRAV 64 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 ++A P K++Y+PL+ KERF ALQS ++D+LSR T WTL R+ LG++F + Y+DGQ Sbjct: 65 AAATLGSPDKVKYVPLSTKERFTALQSGEVDLLSRQTTWTLSRDTDLGMSFVGVNYYDGQ 124 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 F++ G+ SV +LSGAS+C + GTTTE +ADYF A+ ++Y I FE+ ++ A+ Sbjct: 125 AFMVRGDIGVKSVKELSGASVCTETGTTTEQNMADYFSANKIEYQVIAFEKADQTIQAFN 184 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 + RCD Y+ D SALY+ +LT + P V+LP++ISK PL PA+ QGD +W+ +V WT +A Sbjct: 185 SGRCDVYSTDASALYSQRLTLNDPDRFVVLPEVISKEPLGPAVRQGDDQWFKVVRWTLFA 244 Query: 248 MVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYG 307 M+ AEELGIT++N + + T +RFLGID + G+ALGL W Y+ + +GNYG Sbjct: 245 MIEAEELGITRENAASLLESGTAAQ-KRFLGIDNEA--GKALGLDPKWAYQTVAAVGNYG 301 Query: 308 EMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 E+F+R+LG +S L+I RG N LW+ GGL+YAPP+R Sbjct: 302 EIFERHLGKESALRIDRGLNKLWNNGGLIYAPPVR 336 >gi|170720090|ref|YP_001747778.1| extracellular solute-binding protein [Pseudomonas putida W619] gi|169758093|gb|ACA71409.1| extracellular solute-binding protein family 3 [Pseudomonas putida W619] Length = 342 Score = 353 bits (905), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 157/324 (48%), Positives = 226/324 (69%), Gaps = 2/324 (0%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 S + + L +KK+GF++CG++ GL GF+ A G G D D CRA+++A+F D +K+ Sbjct: 21 STAQAGATLDAVKKKGFVQCGVSDGLPGFSVPDAQGKIVGIDADVCRAVAAAVFGDATKV 80 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 ++ LNAKERF ALQS ++D+LSRNT WT R+ +GL F +TY+DG GF+++KK G+S Sbjct: 81 KFSQLNAKERFTALQSGEVDVLSRNTTWTSSRDAGMGLVFAGVTYYDGVGFLVNKKLGVS 140 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 S +L GA+IC+QAGTTTEL ++DYF+A+ +KY PI F+ +E + + RCD T D Sbjct: 141 SAKELDGATICIQAGTTTELNVSDYFRANGLKYTPITFDTSDESAKSLESGRCDVLTSDK 200 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 S L+A + P+++V+LP+ ISK PL P + +GD EW++IV WT +AM+ AEE G+T Sbjct: 201 SQLFAQRSKLAGPTDYVVLPETISKEPLGPVVRKGDEEWFSIVKWTLFAMLNAEEAGVTS 260 Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318 KN+ +K T NPD R LG D G+ L L KDW +I++ +GNYGE+F++NLG + Sbjct: 261 KNVEAEAKSTKNPDTARLLGAD--GEYGKDLKLPKDWVVQIVKQVGNYGEVFEKNLGQST 318 Query: 319 ELKIPRGYNALWSKGGLMYAPPIR 342 +LKI RG NALW+ GG+ YAPP+R Sbjct: 319 DLKIDRGMNALWNNGGIQYAPPVR 342 >gi|331664877|ref|ZP_08365782.1| putative amino-acid ABC transporter-binding protein YhdW [Escherichia coli TA143] gi|331058125|gb|EGI30107.1| putative amino-acid ABC transporter-binding protein YhdW [Escherichia coli TA143] Length = 341 Score = 353 bits (905), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 154/319 (48%), Positives = 223/319 (69%), Gaps = 2/319 (0%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + L ++K+GF++CGI+ GL GF+ A+G + G DVD CR +++A+F D +K++Y PL Sbjct: 25 GATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGIDVDVCRGVAAAVFGDDTKVKYTPL 84 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 AKERF ALQS ++D+LSRNT WT R+ +G+AF +TY+DG GF+ H K G+ S +L Sbjct: 85 TAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKEL 144 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R +E A + RCD D S LYA Sbjct: 145 DGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYA 204 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 L++ P+E ++LP++ISK PL P + +GD EW++IV WT +AM+ AEE+GI +N+++ Sbjct: 205 LRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDE 264 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 + PD+ LG K + G+ L L W Y II+ +GNY E+F+RN+G++S LKI Sbjct: 265 KEANPATPDMAHLLG--KEGDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIK 322 Query: 324 RGYNALWSKGGLMYAPPIR 342 RG N LW+ GG+ YAPP+R Sbjct: 323 RGQNNLWNNGGIQYAPPVR 341 >gi|116051889|ref|YP_789268.1| putative amino acid-binding protein [Pseudomonas aeruginosa UCBPP-PA14] gi|115587110|gb|ABJ13125.1| Putative amino-acid ABC transporter binding protei [Pseudomonas aeruginosa UCBPP-PA14] Length = 341 Score = 353 bits (905), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 156/334 (46%), Positives = 233/334 (69%), Gaps = 2/334 (0%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 +L + L ++ + + L +K++G+++CG++ GL GF+ A G +KG DVD CRAL+ Sbjct: 10 LLAAVCLGASATAEAGATLDAVKRKGYVQCGVSDGLPGFSYADAKGRFKGLDVDICRALA 69 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 +A+F D K+++ PL A ERF ALQS +D+LSRNT WT R+ +LG+ F +TYFDGQG Sbjct: 70 AALFGDAEKVRFTPLPATERFSALQSGTVDLLSRNTSWTSSRDTALGIHFTGVTYFDGQG 129 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 F++++K G+SS +L A++C+Q+GTT EL +ADYF+AH ++Y ++ + E+ A A Sbjct: 130 FLVNRKLGVSSARELKDATVCIQSGTTNELNVADYFRAHGIRYKAVLDDSYEKSARALEA 189 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 +CD + D S LYA +L +P ++V+LP++ISK PL PA+ QGD W+NIV WT Y + Sbjct: 190 GQCDVLSSDQSQLYAQRLKLAKPDQYVVLPEVISKEPLGPAVRQGDEAWFNIVRWTLYGL 249 Query: 249 VTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGE 308 + AEELG+T N+ + ++D+ NPDV R LG + G+ L L +DW +++R +GNYGE Sbjct: 250 LNAEELGVTSSNVERQARDSRNPDVARLLG--SEGDAGKDLQLPRDWVVQMVRQVGNYGE 307 Query: 309 MFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +F RN+G+ S LK+PRG NA W+ GGL YAPPIR Sbjct: 308 IFARNVGDGSPLKMPRGLNAQWNLGGLHYAPPIR 341 >gi|325498846|gb|EGC96705.1| putative amino-acid ABC transporter binding protein yhdW precursor [Escherichia fergusonii ECD227] Length = 341 Score = 353 bits (905), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 153/319 (47%), Positives = 224/319 (70%), Gaps = 2/319 (0%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + L ++K+GF++CGI+ GL GF+ A+G + G DVD CR +++A+F D +K++Y PL Sbjct: 25 GATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGIDVDVCRGVAAAVFGDDTKVKYTPL 84 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 AKERF ALQS ++D+LSRNT WT R+ +G+AF +TY+DG GF+ H K G+ S +L Sbjct: 85 TAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKEL 144 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R +E A + RCD D S LYA Sbjct: 145 DGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYA 204 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 L++ P+E ++LP++ISK PL P + +GD EW++IV WT +AM+ AEE+G+ +N+++ Sbjct: 205 LRIKLSNPTEWIVLPEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGVNSQNVDE 264 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 + + PD+ LG K + G+ L L W Y II+ +GNY E+F+RN+G++S LKI Sbjct: 265 KAANPATPDMAHLLG--KEGDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIK 322 Query: 324 RGYNALWSKGGLMYAPPIR 342 RG N LW+ GG+ YAPP+R Sbjct: 323 RGQNNLWNNGGIQYAPPVR 341 >gi|194435095|ref|ZP_03067332.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Shigella dysenteriae 1012] gi|194416657|gb|EDX32789.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Shigella dysenteriae 1012] Length = 341 Score = 352 bits (904), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 154/319 (48%), Positives = 224/319 (70%), Gaps = 2/319 (0%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + L ++K+GF++CGI+ GL GF+ A+G + G DVD CR +++A+F D +K++Y PL Sbjct: 25 GATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGIDVDVCRGVAAAVFGDDTKVKYTPL 84 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 AKERF ALQS ++D+LSRNT WT R+ +G+AF +TY+DG GF+ H K G+ S +L Sbjct: 85 TAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKEL 144 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R +E A + RCD D S LYA Sbjct: 145 DGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYA 204 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 L++ P+E ++LP++ISK PL P + +GD EW++IV WT +AM+ AEE+GI +N+++ Sbjct: 205 LRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGIDSQNVDE 264 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 + + PD+ LG K + G+ L L W Y II+ +GNY E+F+RN+G++S LKI Sbjct: 265 KAANPATPDMAHLLG--KEGDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIK 322 Query: 324 RGYNALWSKGGLMYAPPIR 342 RG N LW+ GG+ YAPP+R Sbjct: 323 RGQNNLWNNGGIQYAPPVR 341 >gi|239832600|ref|ZP_04680929.1| amino-acid ABC transporter-binding protein yhdW precursor [Ochrobactrum intermedium LMG 3301] gi|239824867|gb|EEQ96435.1| amino-acid ABC transporter-binding protein yhdW precursor [Ochrobactrum intermedium LMG 3301] Length = 339 Score = 352 bits (904), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 160/335 (47%), Positives = 220/335 (65%), Gaps = 3/335 (0%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 S+L A L +K+RG L CG++ G+ GF+ G W GFD+DFCRA+ Sbjct: 8 SLLAAGFALSAQGGAQADTLSTVKERGKLNCGVSQGVAGFSSPDDQGKWTGFDIDFCRAV 67 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 S+A+F DP K+ ++PL+ KERF ALQS +D+LSR T WTL R+ +G+ F Y+DGQ Sbjct: 68 SAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGILFVGTAYYDGQ 127 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 GF++ K G+ S +L GAS+C + GTTTE ADYF A+N+KY P+V + + I A+ Sbjct: 128 GFLIRKDLGVDSALKLDGASVCTEQGTTTEQNAADYFSANNIKYEPVVIDSADGILKAFE 187 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 RCD YT D SALYA +L P +LP++ISK PL PA+ QGD +W+N+V WT +A Sbjct: 188 TGRCDVYTTDASALYAQRLKLAEPDAFTVLPEVISKEPLGPAVRQGDDKWFNVVRWTLFA 247 Query: 248 MVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYG 307 ++ AEELG+TQ + + ++ PDV+RFLG + G+ LGL W Y ++ +GNYG Sbjct: 248 LLEAEELGVTQASA-EADLNSKKPDVRRFLG--SEGDGGQQLGLEPKWAYNVVSTIGNYG 304 Query: 308 EMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 EMF+R +G S LKI RG NALW+KGGLMYAPP++ Sbjct: 305 EMFERTIGKGSLLKIDRGLNALWNKGGLMYAPPVK 339 >gi|301022227|ref|ZP_07186142.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 69-1] gi|331674783|ref|ZP_08375542.1| putative amino-acid ABC transporter-binding protein YhdW [Escherichia coli TA280] gi|284923282|emb|CBG36376.1| Putative ABC transporter, substrate-binding protein [Escherichia coli 042] gi|300397640|gb|EFJ81178.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 69-1] gi|323966446|gb|EGB61880.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli M863] gi|323979012|gb|EGB74090.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli TW10509] gi|324115128|gb|EGC09092.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia fergusonii B253] gi|327251362|gb|EGE63051.1| general L-amino acid-binding periplasmic protein aapJ [Escherichia coli STEC_7v] gi|331068222|gb|EGI39618.1| putative amino-acid ABC transporter-binding protein YhdW [Escherichia coli TA280] Length = 341 Score = 352 bits (904), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 153/319 (47%), Positives = 224/319 (70%), Gaps = 2/319 (0%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + L ++K+GF++CGI+ GL GF+ A+G + G DVD CR +++A+F D +K++Y PL Sbjct: 25 GATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGIDVDVCRGVAAAVFGDDTKVKYTPL 84 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 AKERF ALQS ++D+LSRNT WT R+ +G+AF +TY+DG GF+ H K G+ S +L Sbjct: 85 TAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKEL 144 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R +E A + RCD D S LYA Sbjct: 145 DGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYA 204 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 L++ P+E ++LP++ISK PL P + +GD EW++IV WT +AM+ AEE+G+ +N+++ Sbjct: 205 LRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGVNSQNVDE 264 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 + + PD+ LG K + G+ L L W Y II+ +GNY E+F+RN+G++S LKI Sbjct: 265 KAANPATPDMAHLLG--KEGDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIK 322 Query: 324 RGYNALWSKGGLMYAPPIR 342 RG N LW+ GG+ YAPP+R Sbjct: 323 RGQNNLWNNGGIQYAPPVR 341 >gi|304396995|ref|ZP_07378875.1| extracellular solute-binding protein family 3 [Pantoea sp. aB] gi|304355791|gb|EFM20158.1| extracellular solute-binding protein family 3 [Pantoea sp. aB] Length = 341 Score = 352 bits (904), Expect = 4e-95, Method: Compositional matrix adjust. Identities = 155/319 (48%), Positives = 220/319 (68%), Gaps = 2/319 (0%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + L IKK+GF++CGI+ GL GF+ A G + G DVD CRA ++A+F D +K++Y PL Sbjct: 25 GTTLDAIKKKGFVQCGISDGLPGFSYADAGGKFTGIDVDVCRATAAAVFGDATKVKYTPL 84 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 AKERF ALQS ++D+LSRNT WT R+ +G F + Y+DG GF+ HKK G+ S +L Sbjct: 85 TAKERFTALQSGEVDVLSRNTTWTSSRDGGMGFLFAGVNYYDGIGFLTHKKAGLKSAKEL 144 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 GA++C+Q+GT TEL +ADYFKA+ M+Y P+ F+R +E A + RCD D S LYA Sbjct: 145 DGATVCIQSGTDTELNVADYFKANKMQYTPVTFDRSDESAKALDSGRCDTLASDQSQLYA 204 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 L++ +P + ++LP++ISK PL P + +GD +W+ IV W+ YAM+ AEE+GI KN++Q Sbjct: 205 LRIKLGKPDDFIVLPEVISKEPLGPLVRRGDDDWFTIVKWSLYAMLNAEEMGINSKNVDQ 264 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 ++ T PD+ FLG + + G+ L L W Y I++ +GNY E FDRN+G S LKI Sbjct: 265 MTAKPTTPDMAHFLGAE--GDFGKDLKLDNKWAYNIVKQVGNYQESFDRNVGKDSALKIA 322 Query: 324 RGYNALWSKGGLMYAPPIR 342 RG NALW++GG+ YAPP+R Sbjct: 323 RGQNALWNQGGIQYAPPVR 341 >gi|330963203|gb|EGH63463.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 342 Score = 352 bits (904), Expect = 4e-95, Method: Compositional matrix adjust. Identities = 163/342 (47%), Positives = 229/342 (66%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L T + + L I K+GF++CG++ GL GF+ + G G D Sbjct: 3 MLKSTLAIVTALTAFGVTGAANAGTTLDAIVKKGFVQCGVSDGLPGFSVPDSTGKITGID 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D CRA+++A+F D +K+++ LNAKERF ALQS +IDILSRNT WT R+ ++GL F Sbjct: 63 ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDSAMGLMFAG 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DG GF+++KK G++S +L GA+IC+QAGTTTEL ++DYF+++N+KY PI F+ + Sbjct: 123 VTYYDGIGFLVNKKLGVNSAKELDGATICIQAGTTTELNVSDYFRSNNLKYTPITFDTSD 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + RCD T D S LYA + +P ++V+LP++ISK PL P + + D EW+ I Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYVVLPEVISKEPLGPVVRKNDPEWFAI 242 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEE IT KN+ +K T NPDV R LG D + G+ L L KDW +I+ Sbjct: 243 VKWTLFAMLNAEEAKITSKNVEAEAKATKNPDVARMLGADGT--YGKDLNLPKDWVVQIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F+RNLG + LKI RG NALW+ GG+ YAPPIR Sbjct: 301 KQVGNYGEVFERNLGEGTPLKIKRGQNALWNAGGIQYAPPIR 342 >gi|322834718|ref|YP_004214745.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602] gi|321169919|gb|ADW75618.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602] Length = 341 Score = 352 bits (904), Expect = 4e-95, Method: Compositional matrix adjust. Identities = 159/340 (46%), Positives = 230/340 (67%), Gaps = 8/340 (2%) Query: 9 ILCLIILFFTSFSTNA------SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 IL ++ SF T A + L +KK+GF++CGI+ GL GF+ + G + G DVD Sbjct: 4 ILLSTLIAAASFVTLAGQAHAGTTLDAVKKKGFVQCGISDGLPGFSYADSKGKFTGIDVD 63 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 CRA+++A+F D K++Y PL AKERF ALQS ++DILSRNT WT R+ +G+ F + Sbjct: 64 VCRAVAAAVFGDAEKVKYTPLTAKERFTALQSGEVDILSRNTTWTSSRDAGMGMIFAGVN 123 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y+DG GF+ H+K G+ S +L GA++C+QAGT TEL +ADYFKA+ M Y P+ F+R +E Sbjct: 124 YYDGIGFLTHQKAGLKSAKELDGATVCLQAGTDTELNVADYFKANKMTYTPVTFDRSDES 183 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A + RCD D S LYAL++ +P E ++LP++ISK PL P + +GD +W IV Sbjct: 184 AKALDSGRCDTLASDQSQLYALRIKLGKPDEFIVLPEVISKEPLGPVVRRGDEDWLAIVR 243 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302 W+ +AM+ AEE+G+T +N+++++ + T PD+ LG K+ G L + DW +I++ Sbjct: 244 WSLFAMLNAEEMGVTSQNVDKLAANPTTPDMSNLLG--KTGTYGADLKVPNDWVVKIVKQ 301 Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGE F+RN+G SELKI RG NALW+KGG+ YAPP+R Sbjct: 302 VGNYGESFERNVGQGSELKIKRGQNALWNKGGIQYAPPVR 341 >gi|330873115|gb|EGH07264.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 342 Score = 352 bits (903), Expect = 4e-95, Method: Compositional matrix adjust. Identities = 163/342 (47%), Positives = 229/342 (66%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L T + + L I K+GF++CG++ GL GF+ + G G D Sbjct: 3 MLKSTLAIVTALTAFGVTGAANAGATLDAIVKKGFVQCGVSDGLPGFSVPDSTGKITGID 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D CRA+++A+F D +K+++ LNAKERF ALQS +IDILSRNT WT R+ ++GL F Sbjct: 63 ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDSAMGLMFAG 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DG GF+++KK G++S +L GA+IC+QAGTTTEL ++DYF+++N+KY PI F+ + Sbjct: 123 VTYYDGIGFLVNKKLGVNSAKELDGATICIQAGTTTELNVSDYFRSNNLKYTPITFDTSD 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + RCD T D S LYA + +P ++V+LP++ISK PL P + + D EW+ I Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYVVLPEVISKEPLGPVVRKNDPEWFAI 242 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEE IT KN+ +K T NPDV R LG D + G+ L L KDW +I+ Sbjct: 243 VKWTLFAMLNAEEAKITSKNVEAEAKATKNPDVARMLGADGT--YGKDLNLPKDWVVQIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F+RNLG + LKI RG NALW+ GG+ YAPPIR Sbjct: 301 KQVGNYGEVFERNLGEGTPLKIKRGQNALWNAGGIQYAPPIR 342 >gi|289678218|ref|ZP_06499108.1| extracellular solute-binding protein [Pseudomonas syringae pv. syringae FF5] gi|330975706|gb|EGH75772.1| extracellular solute-binding protein [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 342 Score = 352 bits (903), Expect = 4e-95, Method: Compositional matrix adjust. Identities = 161/342 (47%), Positives = 228/342 (66%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L + + L IKK+GF++CG++ GL GF+ + G G D Sbjct: 3 MLKSTLAVVTALAAFGVIGAANAGTTLDAIKKKGFIQCGVSDGLPGFSVPDSTGKITGID 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D CRA+++A+F D +K+++ LNAKERF ALQS +IDILSRNT WT R+ +GL F Sbjct: 63 ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDAGMGLVFTG 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DG GF+++ K G++S +L GA+IC+QAGTTTEL ++DYF+++ +KY PI F+ + Sbjct: 123 VTYYDGIGFLVNNKLGVNSAKELDGATICIQAGTTTELNVSDYFRSNGLKYTPITFDTSD 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + RCD T D S LYA + +P ++++LP++ISK PL P + +GD EW++I Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYIVLPEVISKEPLGPVVRKGDEEWFSI 242 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEE IT KN+ +K T NPDV R LG D + G+ L L KDW +I+ Sbjct: 243 VRWTLFAMLNAEEAKITSKNVEAEAKSTKNPDVARMLGADGT--YGQDLKLPKDWVVQIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F+RNLG + LKI RG NALW+ GG+ YAPPIR Sbjct: 301 KQVGNYGEVFERNLGEGTPLKIKRGQNALWNAGGIQYAPPIR 342 >gi|330962155|gb|EGH62415.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 342 Score = 352 bits (903), Expect = 4e-95, Method: Compositional matrix adjust. Identities = 161/342 (47%), Positives = 227/342 (66%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L T + + L I+K+GF++CG++ GL GF+ + G G D Sbjct: 3 MLKSTLAVVTALAAFGVTGAANAGATLDAIQKKGFVQCGVSDGLPGFSVPDSTGKITGID 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D CRA+++A+F D +K+++ LNAKERF ALQS +IDILSRNT WT R+ +GL F Sbjct: 63 ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDAGMGLVFTG 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DG GF+++ K G+ S +L GA+IC+QAGTTTEL ++DYF+++ +KY PI F+ + Sbjct: 123 VTYYDGIGFLVNNKLGVKSAKELDGATICIQAGTTTELNVSDYFRSNGLKYTPITFDTSD 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + RCD T D S LYA + +P ++++LP++ISK PL P + +GD EW++I Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYIVLPEVISKEPLGPVVRKGDEEWFSI 242 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEE IT KN+ +K T NPDV R LG D G+ L L KDW +I+ Sbjct: 243 VRWTLFAMLNAEEAKITSKNVEAEAKATKNPDVARMLGAD--GTYGKDLKLPKDWVVKIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F+RNLG + LKI RG NALW+ GG+ YAPPIR Sbjct: 301 KQVGNYGEVFERNLGEGTPLKIKRGQNALWNAGGIQYAPPIR 342 >gi|15966449|ref|NP_386802.1| putative amino acid-binding periplasmic signal peptide protein [Sinorhizobium meliloti 1021] gi|15075720|emb|CAC47275.1| Putative amino acid-binding periplasmic signal peptide protein [Sinorhizobium meliloti 1021] Length = 331 Score = 352 bits (903), Expect = 5e-95, Method: Compositional matrix adjust. Identities = 158/334 (47%), Positives = 233/334 (69%), Gaps = 7/334 (2%) Query: 13 IILFFTSF----STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 + LF T+F + A+ L +K+RG L+CG++ G++GF+ G+W GFD+DFCRA++ Sbjct: 1 MALFATAFLAGTTAQAATLDVVKQRGELRCGVSQGVLGFSAPDDKGEWSGFDIDFCRAVA 60 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 +A P K++Y+PL+ KERF ALQS ++D+LSR T WTL R+ LG++F + Y+DGQ Sbjct: 61 AATLGSPDKVKYVPLSTKERFTALQSGEVDLLSRQTTWTLSRDTDLGMSFVGVNYYDGQA 120 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 F++ G+ SV +LSGAS+C + GTTTE +ADYF A+ ++Y I FE+ ++ A+ + Sbjct: 121 FMVRGDIGVKSVKELSGASVCTETGTTTEQNMADYFSANKIEYQVIAFEKADQTIQAFNS 180 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 RCD Y+ D SALY+ +LT + P V+LP++ISK PL PA+ QGD +W+ +V WT +AM Sbjct: 181 GRCDVYSTDASALYSQRLTLNDPDRFVVLPEVISKEPLGPAVRQGDDQWFKVVRWTLFAM 240 Query: 249 VTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGE 308 + AEELGIT++N + + T +RFLGID + G+ALGL W Y+ + +GNYGE Sbjct: 241 IEAEELGITRENAASLLESGTAAQ-KRFLGIDNEA--GKALGLDPKWAYQTVAAVGNYGE 297 Query: 309 MFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +F+R+LG +S L+I RG N LW+ GGL+YAPP+R Sbjct: 298 IFERHLGKESALRIDRGLNKLWNNGGLIYAPPVR 331 >gi|152998388|ref|YP_001343223.1| extracellular solute-binding protein [Marinomonas sp. MWYL1] gi|150839312|gb|ABR73288.1| extracellular solute-binding protein family 3 [Marinomonas sp. MWYL1] Length = 341 Score = 352 bits (903), Expect = 5e-95, Method: Compositional matrix adjust. Identities = 156/317 (49%), Positives = 221/317 (69%), Gaps = 3/317 (0%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L D+K +GF++CG++TG+ GF+ G+W G DVD CRA++SAIF D K ++ PL+AK Sbjct: 27 LEDVKAKGFVQCGVSTGVPGFSNADDKGNWTGLDVDACRAVASAIFGDAQKAKFTPLSAK 86 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 ER ALQS +ID+L+RNT WT R+ SLGL F + ++DGQGF++ K G+ S L GA Sbjct: 87 ERLTALQSGEIDVLTRNTTWTYTRDASLGLDFTAVNFYDGQGFMVRKDLGVKSAMDLDGA 146 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 ++C + GTTTEL +AD+F+ + + Y P+V ++ +E AAY + RCD YT D S L A + Sbjct: 147 TVCTEQGTTTELNMADFFRKNKLSYVPVVVQKADEALAAYDSGRCDVYTTDKSGLAAHRT 206 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 PS HVILP+ ISK PLAP + GD +W +IV+W + V AEE+GIT KN+ ++ Sbjct: 207 KLADPSAHVILPETISKEPLAPVVRHGDNQWKDIVTWALFVQVNAEEMGITSKNVAKIKA 266 Query: 267 DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGY 326 +T +P ++R LG++ ++G LGL DW Y II +GNYGE+F+RN+G + L IPRG Sbjct: 267 ETNDPSIKRLLGVE--GDMGSQLGLPADWAYNIIAKVGNYGEVFERNIGPSTPLDIPRGL 324 Query: 327 NALWSK-GGLMYAPPIR 342 NALW++ GG+MYAPP+R Sbjct: 325 NALWTEAGGIMYAPPVR 341 >gi|66044325|ref|YP_234166.1| extracellular solute-binding protein [Pseudomonas syringae pv. syringae B728a] gi|63255032|gb|AAY36128.1| extracellular solute-binding protein, family 3 [Pseudomonas syringae pv. syringae B728a] Length = 342 Score = 352 bits (903), Expect = 5e-95, Method: Compositional matrix adjust. Identities = 161/342 (47%), Positives = 226/342 (66%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L + + L IKK+GF++CG++ GL GF+ + G G D Sbjct: 3 MLKSTLAVVTALAAFGVIGAANAGTTLDAIKKKGFIQCGVSDGLPGFSVPDSTGKITGID 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D CRA+++A+F D +K+++ LNAKERF ALQS +IDILSRNT WT R+ +GL F Sbjct: 63 ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDAGMGLVFTG 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DG GF+++ K G+ S +L GA+IC+QAGTTTEL ++DYF+++ +KY PI F+ + Sbjct: 123 VTYYDGIGFLVNNKLGVKSAKELDGATICIQAGTTTELNVSDYFRSNGLKYTPITFDTSD 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + RCD T D S LYA + +P ++++LP++ISK PL P + +GD EW++I Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYIVLPEVISKEPLGPVVRKGDEEWFSI 242 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEE IT KN+ +K T NPDV R LG D G+ L L KDW +I+ Sbjct: 243 VRWTLFAMLNAEEAKITSKNVEAEAKSTKNPDVARMLGAD--GTYGKDLKLEKDWVVQIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F+RNLG + LKI RG NALW+ GG+ YAPPIR Sbjct: 301 KQVGNYGEVFERNLGEGTPLKIKRGQNALWNAGGIQYAPPIR 342 >gi|28868466|ref|NP_791085.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213967086|ref|ZP_03395235.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato T1] gi|301386368|ref|ZP_07234786.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato Max13] gi|302060650|ref|ZP_07252191.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato K40] gi|302133060|ref|ZP_07259050.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28851704|gb|AAO54780.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213927928|gb|EEB61474.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato T1] gi|331015252|gb|EGH95308.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 342 Score = 352 bits (902), Expect = 5e-95, Method: Compositional matrix adjust. Identities = 163/342 (47%), Positives = 229/342 (66%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L T + + L I K+GF++CG++ GL GF+ + G G D Sbjct: 3 MLKSTLAIVTALAAFGVTGAANAGATLDAIVKKGFVQCGVSDGLPGFSVPDSTGKITGID 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D CRA+++A+F D +K+++ LNAKERF ALQS +IDILSRNT WT R+ ++GL F Sbjct: 63 ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDSAMGLMFAG 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DG GF+++KK G++S +L GA+IC+QAGTTTEL ++DYF+++N+KY PI F+ + Sbjct: 123 VTYYDGIGFLVNKKLGVNSAKELDGATICIQAGTTTELNVSDYFRSNNLKYTPITFDTSD 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + RCD T D S LYA + +P ++V+LP++ISK PL P + + D EW+ I Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYVVLPEVISKEPLGPVVRKNDPEWFAI 242 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEE IT KN+ +K T NPDV R LG D + G+ L L KDW +I+ Sbjct: 243 VKWTLFAMLNAEEAKITSKNVEAEAKATKNPDVARMLGADGT--YGKDLNLPKDWVVQIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F+RNLG + LKI RG NALW+ GG+ YAPPIR Sbjct: 301 KQVGNYGEVFERNLGEGTPLKIKRGQNALWNAGGIQYAPPIR 342 >gi|71735932|ref|YP_273398.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71556485|gb|AAZ35696.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 342 Score = 352 bits (902), Expect = 5e-95, Method: Compositional matrix adjust. Identities = 160/342 (46%), Positives = 228/342 (66%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L T + + L I+K+GF++CG++ GL GF+ + G G D Sbjct: 3 MLKSTLAVVTALAAFGVTGVANAGATLDAIQKKGFVQCGVSDGLPGFSVPDSTGKITGID 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D CRA+++A+F D +K+++ LNAKERF ALQS +IDILSRNT WT R+ +GL F Sbjct: 63 ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDAGMGLVFTG 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DG GF+++ K G+ S +L GA+IC+QAGTTTEL ++DYF+++ +KY PI F+ + Sbjct: 123 VTYYDGIGFLVNNKLGVKSAKELDGATICIQAGTTTELNVSDYFRSNGLKYTPITFDTSD 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + RCD T D S LYA + +P ++++LP++ISK PL P + +GD +W++I Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYIVLPEVISKEPLGPVVRKGDEDWFSI 242 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEE IT KN+ +K T NPDV R LG D G+ L L KDW +I+ Sbjct: 243 VRWTLFAMLNAEEAKITSKNVEAEAKSTKNPDVARMLGAD--GTYGKDLKLPKDWVVQIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F+RNLG+ + LKI RG NALW+ GG+ YAPPIR Sbjct: 301 KQVGNYGEVFERNLGDGTPLKIKRGQNALWNAGGIQYAPPIR 342 >gi|330969254|gb|EGH69320.1| extracellular solute-binding protein [Pseudomonas syringae pv. aceris str. M302273PT] Length = 342 Score = 352 bits (902), Expect = 6e-95, Method: Compositional matrix adjust. Identities = 161/342 (47%), Positives = 226/342 (66%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L + + L IKK+GF++CG++ GL GF+ + G G D Sbjct: 3 MLKSTLAVVTALAAFGVIGAANAGTTLDAIKKKGFIQCGVSDGLPGFSVPDSTGKITGID 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D CRA+++A+F D +K+++ LNAKERF ALQS +IDILSRNT WT R+ +GL F Sbjct: 63 ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDAGMGLVFTG 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DG GF+++ K G+ S +L GA+IC+QAGTTTEL ++DYF+++ +KY PI F+ + Sbjct: 123 VTYYDGIGFLVNNKLGVKSAKELDGATICIQAGTTTELNVSDYFRSNGLKYTPITFDTSD 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + RCD T D S LYA + +P ++++LP++ISK PL P + +GD EW++I Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYIVLPEVISKEPLGPVVRKGDEEWFSI 242 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEE IT KN+ +K T NPDV R LG D G+ L L KDW +I+ Sbjct: 243 VRWTLFAMLNAEEAKITSKNVEAEAKSTKNPDVARMLGAD--GTYGQDLKLPKDWVVQIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F+RNLG + LKI RG NALW+ GG+ YAPPIR Sbjct: 301 KQVGNYGEVFERNLGEGTPLKIKRGQNALWNAGGIQYAPPIR 342 >gi|26249860|ref|NP_755900.1| putative amino-acid ABC transporter binding protein yhdW [Escherichia coli CFT073] gi|110643514|ref|YP_671244.1| putative amino-acid ABC transporter binding protein YhdW precursor [Escherichia coli 536] gi|191173851|ref|ZP_03035372.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli F11] gi|227887996|ref|ZP_04005801.1| amino-acid ABC superfamily ATP binding cassette transporter binding protein yhdW precursor [Escherichia coli 83972] gi|300979705|ref|ZP_07174655.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 200-1] gi|300991067|ref|ZP_07179488.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 45-1] gi|301047875|ref|ZP_07194922.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 185-1] gi|26110288|gb|AAN82474.1|AE016767_234 Putative amino-acid ABC transporter binding protein yhdW precursor [Escherichia coli CFT073] gi|110345106|gb|ABG71343.1| putative amino-acid ABC transporter binding protein YhdW precursor [Escherichia coli 536] gi|190905901|gb|EDV65519.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli F11] gi|227835392|gb|EEJ45858.1| amino-acid ABC superfamily ATP binding cassette transporter binding protein yhdW precursor [Escherichia coli 83972] gi|300300218|gb|EFJ56603.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 185-1] gi|300307923|gb|EFJ62443.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 200-1] gi|300406988|gb|EFJ90526.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 45-1] gi|307555363|gb|ADN48138.1| putative periplasmic amino-acid ABC transporter binding protein [Escherichia coli ABU 83972] gi|315294821|gb|EFU54164.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 153-1] gi|324015878|gb|EGB85097.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 60-1] Length = 341 Score = 352 bits (902), Expect = 6e-95, Method: Compositional matrix adjust. Identities = 153/319 (47%), Positives = 224/319 (70%), Gaps = 2/319 (0%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + L ++K+GF++CGI+ GL GF+ A+G + G DVD CR +++A+F D +K++Y PL Sbjct: 25 GATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGIDVDVCRGVAAAVFGDDTKVKYTPL 84 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 AKERF ALQS ++D+LSRNT WT R+ +G+AF +TY+DG GF+ H K G+ S +L Sbjct: 85 TAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKEL 144 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R +E A + RCD D S LYA Sbjct: 145 DGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYA 204 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 L++ P+E ++LP++ISK PL P + +GD EW++IV WT +AM+ AEE+GI +N+++ Sbjct: 205 LRIKLSNPTEWIVLPEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDE 264 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 + + PD+ LG K + G+ L L W + II+ +GNY E+F+RN+G++S LKI Sbjct: 265 KAANPATPDMAHLLG--KEGDYGKDLKLDNKWAFNIIKQVGNYSEIFERNVGSESPLKIK 322 Query: 324 RGYNALWSKGGLMYAPPIR 342 RG N LW+ GG+ YAPP+R Sbjct: 323 RGQNNLWNNGGIQYAPPVR 341 >gi|49087174|gb|AAT51425.1| PA3858 [synthetic construct] Length = 342 Score = 352 bits (902), Expect = 6e-95, Method: Compositional matrix adjust. Identities = 156/334 (46%), Positives = 234/334 (70%), Gaps = 2/334 (0%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 +L + L ++ + + L K++G+++CG++ GL GF+ A G +KG DVD CRAL+ Sbjct: 10 LLAAVCLGASATAEAGATLDAGKRKGYVQCGVSDGLPGFSYADAKGRFKGLDVDICRALA 69 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 +A+F D K+++ PL+A ERF ALQS +D+LSRNT WT R+ +LG+ F +TYFDGQG Sbjct: 70 AALFGDAEKVRFTPLSATERFSALQSGTVDLLSRNTSWTSSRDTALGIHFTGVTYFDGQG 129 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 F++++K G+SS +L A++C+Q+GTT EL +ADYF+AH ++Y ++ + E+ A A Sbjct: 130 FLVNRKLGVSSARELKDATVCIQSGTTNELNVADYFRAHGIRYKAVLDDSYEKSARALEA 189 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 +CD + D S LYA +L +P ++V+LP++ISK PL PA+ QGD W+NIV WT Y + Sbjct: 190 GQCDVLSSDQSQLYAQRLKLAKPEQYVVLPEVISKEPLGPAVRQGDEAWFNIVRWTLYGL 249 Query: 249 VTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGE 308 + AEELG+T N+ + ++D+ NPDV R LG + + G+ L L +DW +++R +GNYGE Sbjct: 250 LNAEELGVTSSNVERQARDSRNPDVARLLGSE--GDAGKDLQLPRDWVVQMVRQVGNYGE 307 Query: 309 MFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +F RN+G+ S LK+PRG NA W+ GGL YAPPIR Sbjct: 308 IFARNVGDGSPLKMPRGLNAQWNLGGLHYAPPIR 341 >gi|91212699|ref|YP_542685.1| putative periplasmic amino-acid ABC transporter binding protein [Escherichia coli UTI89] gi|117625557|ref|YP_858880.1| putative periplasmic amino-acid ABC transporter binding protein [Escherichia coli APEC O1] gi|215488575|ref|YP_002331006.1| predicted periplasmic binding transport protein; periplasmic-binding component of ABC superfamily [Escherichia coli O127:H6 str. E2348/69] gi|237705973|ref|ZP_04536454.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|306816388|ref|ZP_07450520.1| putative periplasmic binding transport protein; periplasmic-binding component of ABC superfamily [Escherichia coli NC101] gi|312968401|ref|ZP_07782610.1| general L-amino acid-binding periplasmic protein aapJ [Escherichia coli 2362-75] gi|331649069|ref|ZP_08350157.1| putative amino-acid ABC transporter-binding protein YhdW [Escherichia coli M605] gi|331659557|ref|ZP_08360499.1| putative amino-acid ABC transporter-binding protein YhdW [Escherichia coli TA206] gi|91074273|gb|ABE09154.1| putative periplasmic amino-acid ABC transporter binding protein [Escherichia coli UTI89] gi|115514681|gb|ABJ02756.1| putative periplasmic amino-acid ABC transporter binding protein [Escherichia coli APEC O1] gi|215266647|emb|CAS11086.1| predicted periplasmic binding transport protein; periplasmic-binding component of ABC superfamily [Escherichia coli O127:H6 str. E2348/69] gi|222034984|emb|CAP77727.1| amino-acid ABC transporter-binding protein yhdW [Escherichia coli LF82] gi|226899013|gb|EEH85272.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|294494121|gb|ADE92877.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli IHE3034] gi|305849953|gb|EFM50412.1| putative periplasmic binding transport protein; periplasmic-binding component of ABC superfamily [Escherichia coli NC101] gi|307625131|gb|ADN69435.1| predicted periplasmic binding transport protein; periplasmic-binding component of ABC superfamily [Escherichia coli UM146] gi|312286619|gb|EFR14530.1| general L-amino acid-binding periplasmic protein aapJ [Escherichia coli 2362-75] gi|312947826|gb|ADR28653.1| predicted periplasmic binding transport protein; periplasmic-binding component of ABC superfamily [Escherichia coli O83:H1 str. NRG 857C] gi|315289024|gb|EFU48422.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 110-3] gi|315300933|gb|EFU60153.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 16-3] gi|320194754|gb|EFW69384.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Escherichia coli WV_060327] gi|323189120|gb|EFZ74404.1| general L-amino acid-binding periplasmic protein aapJ [Escherichia coli RN587/1] gi|323951212|gb|EGB47087.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli H252] gi|323957584|gb|EGB53298.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli H263] gi|330909319|gb|EGH37833.1| glutamate Aspartate periplasmic binding protein precursor GltI [Escherichia coli AA86] gi|331042816|gb|EGI14958.1| putative amino-acid ABC transporter-binding protein YhdW [Escherichia coli M605] gi|331054139|gb|EGI26168.1| putative amino-acid ABC transporter-binding protein YhdW [Escherichia coli TA206] Length = 341 Score = 352 bits (902), Expect = 7e-95, Method: Compositional matrix adjust. Identities = 153/319 (47%), Positives = 224/319 (70%), Gaps = 2/319 (0%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + L ++K+GF++CGI+ GL GF+ A+G + G DVD CR +++A+F D +K++Y PL Sbjct: 25 GATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGIDVDVCRGVAAAVFGDDTKVKYTPL 84 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 AKERF ALQS ++D+LSRNT WT R+ +G+AF +TY+DG GF+ H K G+ S +L Sbjct: 85 TAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKEL 144 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R +E A + RCD D S LYA Sbjct: 145 DGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYA 204 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 L++ P+E ++LP++ISK PL P + +GD EW++IV WT +AM+ AEE+GI +N+++ Sbjct: 205 LRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDE 264 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 + + PD+ LG K + G+ L L W + II+ +GNY E+F+RN+G++S LKI Sbjct: 265 KAANPATPDMAHLLG--KEGDYGKDLKLDNKWAFNIIKQVGNYSEIFERNVGSESPLKIK 322 Query: 324 RGYNALWSKGGLMYAPPIR 342 RG N LW+ GG+ YAPP+R Sbjct: 323 RGQNNLWNNGGIQYAPPVR 341 >gi|320327255|gb|EFW83269.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330882636|gb|EGH16785.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 342 Score = 351 bits (901), Expect = 8e-95, Method: Compositional matrix adjust. Identities = 160/342 (46%), Positives = 229/342 (66%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L T + + L I+K+GF++CG++ GL GF+ + G G D Sbjct: 3 MLKSTLAVVTALAAFGVTGAANAGATLDAIQKKGFVQCGVSDGLPGFSVPDSTGKITGID 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D CRA+++A+F D +K+++ LNAKERF ALQS +IDILSRNT WT R+ +GL F Sbjct: 63 ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDAGMGLVFTG 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DG GF+++ K G+ S +L GA+IC+QAGTTTEL ++DYF+++ +KY PI F+ + Sbjct: 123 VTYYDGIGFLVNNKLGVKSAKELDGATICIQAGTTTELNVSDYFRSNGLKYTPITFDTSD 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + RCD T D S LYA + +P ++++LP++ISK PL P + +GD +W++I Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYIVLPEVISKEPLGPVVRKGDEDWFSI 242 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEE IT KN+ +K T NPDV R LG D + G+ L L KDW +I+ Sbjct: 243 VRWTLFAMLNAEEAKITSKNVEAEAKSTKNPDVARMLGADGT--YGKDLKLPKDWVVQIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F+RNLG+ + LKI RG NALW+ GG+ YAPPIR Sbjct: 301 KQVGNYGEVFERNLGDGTPLKIKRGQNALWNAGGIQYAPPIR 342 >gi|193071524|ref|ZP_03052434.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli E110019] gi|192955161|gb|EDV85654.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli E110019] Length = 341 Score = 351 bits (901), Expect = 8e-95, Method: Compositional matrix adjust. Identities = 154/319 (48%), Positives = 223/319 (69%), Gaps = 2/319 (0%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + L ++K+GF++CGI+ GL GF+ A+G + G DVD CR +++A+F D +K++Y PL Sbjct: 25 GATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGIDVDVCRGVAAAVFGDDTKVKYTPL 84 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 AKERF ALQS ++D+LSRNT WT R+ +G+AF +TY+DG GF+ H K G+ S +L Sbjct: 85 TAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKEL 144 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R +E A + RCD D S LYA Sbjct: 145 DGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYA 204 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 L++ P+E ++LP++ISK PL P + +GD EW++IV WT +AM+ AEE+GI +N+++ Sbjct: 205 LRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDE 264 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 + + PD+ LG K G+ L L W Y II+ +GNY E+F+RN+G++S LKI Sbjct: 265 KAANPATPDMAHLLG--KEGYYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIK 322 Query: 324 RGYNALWSKGGLMYAPPIR 342 RG N LW+ GG+ YAPP+R Sbjct: 323 RGQNNLWNNGGIQYAPPVR 341 >gi|309785598|ref|ZP_07680229.1| general L-amino acid-binding periplasmic protein aapJ [Shigella dysenteriae 1617] gi|308926718|gb|EFP72194.1| general L-amino acid-binding periplasmic protein aapJ [Shigella dysenteriae 1617] Length = 341 Score = 351 bits (901), Expect = 9e-95, Method: Compositional matrix adjust. Identities = 154/330 (46%), Positives = 228/330 (69%), Gaps = 2/330 (0%) Query: 13 IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72 ++L + + + L ++K+GF++CGI+ GL F+ A+G + G DVD CR +++A+F Sbjct: 14 VLLAIANQAHAGATLDAVQKKGFVQCGISDGLPRFSYADADGKFSGIDVDVCRGVAAAVF 73 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +G+AF +TY+DG GF+ H Sbjct: 74 GDNTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTH 133 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R +E A + RCD Sbjct: 134 DKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRSDESAKALESGRCD 193 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 D S LYAL++ P+E ++LP++ISK PL P + +GD EW++IV WT +AM+ AE Sbjct: 194 TLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAE 253 Query: 253 ELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDR 312 E+GI +N+++ + + PD+ LG K + G+ L L W Y II+ +GNY E+F+R Sbjct: 254 EMGINSQNVDEKAANPATPDMAHLLG--KEGDYGKDLKLDNKWAYNIIKQVGNYSEIFER 311 Query: 313 NLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 N+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 312 NVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341 >gi|323941639|gb|EGB37818.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli E482] Length = 341 Score = 351 bits (900), Expect = 9e-95, Method: Compositional matrix adjust. Identities = 153/319 (47%), Positives = 223/319 (69%), Gaps = 2/319 (0%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + L ++K+GF++CGI+ GL GF+ A+G + G DVD CR +++A+F D +K++Y PL Sbjct: 25 GATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGIDVDICRGVAAAVFGDDTKVKYTPL 84 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 AKERF ALQS ++D+LSRNT WT R+ +G+AF +TY+DG GF+ H K G+ S +L Sbjct: 85 TAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKEL 144 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R +E A + RCD D S LYA Sbjct: 145 DGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYA 204 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 L++ P+E ++LP++ISK PL P + + D EW++IV WT +AM+ AEE+GI +N+++ Sbjct: 205 LRIKLSNPAEWIVLPEVISKEPLGPVVRRADDEWFSIVRWTLFAMLNAEEMGINSQNVDE 264 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 + + PD+ LG K + G+ L L W Y II+ +GNY E+F+RN+G++S LKI Sbjct: 265 KAANPATPDMAHLLG--KEGDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIK 322 Query: 324 RGYNALWSKGGLMYAPPIR 342 RG N LW+ GG+ YAPP+R Sbjct: 323 RGQNNLWNNGGIQYAPPVR 341 >gi|325275056|ref|ZP_08141044.1| general amino acid ABC transporter, periplasmic binding protein [Pseudomonas sp. TJI-51] gi|324099819|gb|EGB97677.1| general amino acid ABC transporter, periplasmic binding protein [Pseudomonas sp. TJI-51] Length = 342 Score = 351 bits (900), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 157/319 (49%), Positives = 225/319 (70%), Gaps = 2/319 (0%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + L +KK+GF++CG++ GL GF+ A G G D D CRA+++A+F D +K+++ L Sbjct: 26 GATLDAVKKKGFVQCGVSDGLPGFSVPDAQGKIIGIDADVCRAVAAAVFGDANKVKFSQL 85 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 NAKERF ALQS ++D+LSRNT WT R+ +GL F +TY+DG GF+++KK G+SS +L Sbjct: 86 NAKERFTALQSGEVDVLSRNTTWTSSRDAGMGLVFTGVTYYDGVGFLVNKKLGVSSAKEL 145 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 GA+IC+QAGTTTEL ++D+F+A+ +KY PI F+ +E + + RCD T D S L+A Sbjct: 146 DGATICIQAGTTTELNVSDFFRANGLKYTPITFDTSDESAKSLESGRCDVLTSDKSQLFA 205 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 + P+E+V+LP+ ISK PL P + +GD +W++IV WT +AM+ AEE GIT KN+ Sbjct: 206 QRSKLAAPTEYVVLPETISKEPLGPVVRKGDEDWFSIVKWTLFAMLNAEEAGITSKNVEA 265 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 +K T NPDV R LG D G+ L L KDW +I++ +GNYGE+F++NLG ++LKI Sbjct: 266 EAKATKNPDVARLLGAD--GEYGKDLKLPKDWVVQIVKQVGNYGEVFEKNLGQGTDLKID 323 Query: 324 RGYNALWSKGGLMYAPPIR 342 RG NALW+ GG+ YAPP+R Sbjct: 324 RGMNALWNNGGIQYAPPVR 342 >gi|330950965|gb|EGH51225.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae Cit 7] Length = 342 Score = 351 bits (900), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 160/342 (46%), Positives = 227/342 (66%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L T + + L I+K+GF++CG++ GL GF+ + G G D Sbjct: 3 MLKSTLAVVTALAAFGVTGAANAGATLDAIQKKGFIQCGVSDGLPGFSVPDSTGKITGID 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D CRA+++A+F D +K+++ LNAKERF ALQS +IDILSRNT WT R+ +GL F Sbjct: 63 ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDAGMGLVFTG 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DG GF+++ K G+ S +L GA+IC+QAGTTTEL ++DYF+++ +KY PI F+ + Sbjct: 123 VTYYDGIGFLVNNKLGVKSAKELDGATICIQAGTTTELNVSDYFRSNGLKYTPITFDTSD 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + RCD T D S LYA + +P ++++LP++ISK PL P + +GD +W++I Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYIVLPEVISKEPLGPVVRKGDEDWFSI 242 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEE IT KN+ +K T NPDV R LG D G+ L L KDW +I+ Sbjct: 243 VRWTLFAMLNAEEAKITSKNVEAEAKSTKNPDVARMLGAD--GTYGKDLKLPKDWVVQIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F+RNLG + LKI RG NALW+ GG+ YAPPIR Sbjct: 301 KQVGNYGEVFERNLGEGTPLKIKRGQNALWNAGGIQYAPPIR 342 >gi|257487410|ref|ZP_05641451.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289628605|ref|ZP_06461559.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289647200|ref|ZP_06478543.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. aesculi str. 2250] gi|298485800|ref|ZP_07003879.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|302188404|ref|ZP_07265077.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. syringae 642] gi|298159826|gb|EFI00868.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330867828|gb|EGH02537.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330887729|gb|EGH20390.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. mori str. 301020] gi|330988313|gb|EGH86416.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. lachrymans str. M301315] gi|331008998|gb|EGH89054.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 342 Score = 351 bits (900), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 160/342 (46%), Positives = 227/342 (66%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L T + + L I+K+GF++CG++ GL GF+ + G G D Sbjct: 3 MLKSTLAVVTALAAFGVTGAANAGATLDAIQKKGFVQCGVSDGLPGFSVPDSTGKITGID 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D CRA+++A+F D +K+++ LNAKERF ALQS +IDILSRNT WT R+ +GL F Sbjct: 63 ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDAGMGLVFTG 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DG GF+++ K G+ S +L GA+IC+QAGTTTEL ++DYF+++ +KY PI F+ + Sbjct: 123 VTYYDGIGFLVNNKLGVKSAKELDGATICIQAGTTTELNVSDYFRSNGLKYTPITFDTSD 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + RCD T D S LYA + +P ++++LP++ISK PL P + +GD +W++I Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYIVLPEVISKEPLGPVVRKGDEDWFSI 242 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEE IT KN+ +K T NPDV R LG D G+ L L KDW +I+ Sbjct: 243 VRWTLFAMLNAEEAKITSKNVEAEAKSTKNPDVARMLGAD--GTYGKDLKLPKDWVVQIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F+RNLG + LKI RG NALW+ GG+ YAPPIR Sbjct: 301 KQVGNYGEVFERNLGEGTPLKIKRGQNALWNAGGIQYAPPIR 342 >gi|331684909|ref|ZP_08385501.1| putative amino-acid ABC transporter-binding protein YhdW [Escherichia coli H299] gi|331078524|gb|EGI49730.1| putative amino-acid ABC transporter-binding protein YhdW [Escherichia coli H299] Length = 341 Score = 350 bits (899), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 153/319 (47%), Positives = 223/319 (69%), Gaps = 2/319 (0%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + L ++K+G ++CGI+ GL GF+ A+G + G DVD CR +++A+F D +K++Y PL Sbjct: 25 GATLDAVQKKGVVQCGISDGLPGFSYADADGKFSGIDVDVCRGVAAAVFGDDTKVKYTPL 84 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 AKERF ALQS ++D+LSRNT WT R+ +G+AF +TY+DG GF+ H K G+ S +L Sbjct: 85 TAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKEL 144 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R +E A + RCD D S LYA Sbjct: 145 DGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYA 204 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 L++ P+E ++LP++ISK PL P + +GD EW++IV WT +AM+ AEE+GI +N+++ Sbjct: 205 LRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDE 264 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 + + PD+ LG K + G+ L L W Y II+ +GNY E+F+RN+G++S LKI Sbjct: 265 KAANPATPDMAHLLG--KEGDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIK 322 Query: 324 RGYNALWSKGGLMYAPPIR 342 RG N LW+ GG+ YAPP+R Sbjct: 323 RGQNNLWNNGGIQYAPPVR 341 >gi|237799855|ref|ZP_04588316.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022710|gb|EGI02767.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 322 Score = 350 bits (899), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 159/319 (49%), Positives = 223/319 (69%), Gaps = 2/319 (0%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + L I+K+GF++CG++ GL GF+ +NG G D D CRA+++A+F D +K+++ L Sbjct: 6 GATLDAIQKKGFVQCGVSDGLPGFSVPDSNGKITGIDADVCRAVAAAVFGDATKVKFSQL 65 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 NAKERF ALQS +IDILSRNT WT R+ +GL F +TY+DG GF+++ K G+ S +L Sbjct: 66 NAKERFTALQSGEIDILSRNTTWTSSRDAGMGLVFTGVTYYDGIGFLVNNKLGVKSAKEL 125 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 GA+IC+QAGTTTEL ++DYF+++ +KY PI F+ +E + RCD T D S LYA Sbjct: 126 DGATICIQAGTTTELNVSDYFRSNGLKYTPITFDTSDESAKSLEGGRCDVLTSDQSQLYA 185 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 + +P ++V+LP++ISK PL P + +GD EW++IV WT +AM+ AEE IT KN+ Sbjct: 186 QRSKLAKPDDYVVLPEVISKEPLGPVVRKGDEEWFSIVRWTLFAMLNAEEAKITSKNVEA 245 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 +K T NPDV R LG D + G+ L L KDW +I++ +GNYGE+F+RNLG + LKI Sbjct: 246 EAKSTKNPDVARMLGADGT--YGKDLKLPKDWVVQIVKQVGNYGEVFERNLGENTPLKIK 303 Query: 324 RGYNALWSKGGLMYAPPIR 342 RG NALW+ GG+ YAPPIR Sbjct: 304 RGQNALWNAGGIQYAPPIR 322 >gi|227327916|ref|ZP_03831940.1| general L-amino ABC transporter binding protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 305 Score = 350 bits (897), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 153/307 (49%), Positives = 218/307 (71%), Gaps = 2/307 (0%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 ++CGI+ GL GF+ A+G + G DVD CR L++A+F D +K++Y PL AKERF ALQS Sbjct: 1 MQCGISDGLPGFSYADASGKYSGIDVDVCRGLAAAVFGDANKVKYTPLTAKERFTALQSG 60 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 ++D+LSRNT WT R+ +G+ F +TY+DG GF+ H K G++S +L GA++C+QAGT Sbjct: 61 EVDVLSRNTTWTSSRDGGMGMLFTGVTYYDGIGFLTHNKAGLTSAKELDGATVCIQAGTD 120 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215 TEL +ADYFK H M+Y P+ F+R +E A + RCD D S LYAL++ +P+E + Sbjct: 121 TELNVADYFKTHKMQYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSKPAEFI 180 Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 +LP++ISK PL P + +GD EW+ IV WT +AM+ AEE+G+T KN++Q++ T PD+ Sbjct: 181 VLPEVISKEPLGPVVRRGDEEWFAIVRWTLFAMLNAEEMGVTSKNVDQLAAKPTTPDMSH 240 Query: 276 FLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGL 335 LG + S G+ L L DW ++II+ +GNYGE+F+RN+G SELKI RG N LW+KGG+ Sbjct: 241 LLGHEGS--YGKDLKLPNDWAFKIIKQVGNYGEIFERNVGMGSELKIKRGLNELWNKGGI 298 Query: 336 MYAPPIR 342 YAP +R Sbjct: 299 QYAPAVR 305 >gi|320325827|gb|EFW81888.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. glycinea str. B076] Length = 342 Score = 350 bits (897), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 160/342 (46%), Positives = 228/342 (66%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L T + + L I+K+GF++CG++ GL GF+ + G G D Sbjct: 3 MLKSTLAVVTALAAFGVTGAANAGATLDAIQKKGFVQCGVSDGLPGFSVPDSTGKITGID 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D CRA+++A+F D +K+++ LNAKERF ALQS +IDILSRNT WT R+ +GL F Sbjct: 63 ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDAGMGLVFTG 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DG GF+++ K G+ S +L GA+IC+QAGTTTEL ++DYF+++ +KY PI F+ + Sbjct: 123 VTYYDGIGFLVNNKLGVKSAKELDGATICIQAGTTTELNVSDYFRSNGLKYTPITFDTSD 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + RCD T D S LYA + +P ++++LP++ISK PL P + +GD +W++I Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYIVLPEVISKEPLGPVVRKGDEDWFSI 242 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEE IT KN+ +K T NPDV R LG D G+ L L KDW +I+ Sbjct: 243 VRWTLFAMLNAEEAKITSKNVEAEAKLTKNPDVARMLGAD--GTYGKDLKLPKDWVVQIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F+RNLG+ + LKI RG NALW+ GG+ YAPPIR Sbjct: 301 KQVGNYGEVFERNLGDGTPLKIKRGQNALWNAGGIQYAPPIR 342 >gi|110807125|ref|YP_690645.1| putative periplasmic binding transport protein [Shigella flexneri 5 str. 8401] gi|110616673|gb|ABF05340.1| putative periplasmic binding transport protein [Shigella flexneri 5 str. 8401] Length = 341 Score = 349 bits (896), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 153/319 (47%), Positives = 223/319 (69%), Gaps = 2/319 (0%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + L ++K+GF++CGI+ GL F+ A+G + G DVD CR +++A+F D +K++Y PL Sbjct: 25 GATLDAVQKKGFVQCGISDGLPRFSYADADGKFSGIDVDVCRGVAAAVFGDDTKVKYTPL 84 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 AKERF ALQS ++D+LSRNT WT R+ +G+AF +TY+DG GF+ H K G+ S +L Sbjct: 85 TAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKEL 144 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R +E A + RCD D S LYA Sbjct: 145 DGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYA 204 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 L++ P+E ++LP++ISK PL P + +GD EW++IV WT +AM+ AEE+GI +N+++ Sbjct: 205 LRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDE 264 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 + + PD+ LG K + G+ L L W Y II+ +GNY E+F+RN+G++S LKI Sbjct: 265 KAANPATPDMAHLLG--KEGDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIK 322 Query: 324 RGYNALWSKGGLMYAPPIR 342 RG N LW+ GG+ YAPP+R Sbjct: 323 RGQNNLWNNGGIQYAPPVR 341 >gi|92112255|ref|YP_572183.1| extracellular solute-binding protein [Chromohalobacter salexigens DSM 3043] gi|91795345|gb|ABE57484.1| amino acid ABC transporter substrate-binding protein, PAAT family [Chromohalobacter salexigens DSM 3043] Length = 342 Score = 349 bits (896), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 164/343 (47%), Positives = 228/343 (66%), Gaps = 3/343 (0%) Query: 1 MYKD-FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 +YK+ F V++ ++L + ++ A+ L D+K+RG L CG+N GL GF+ A+G+W+G Sbjct: 2 LYKNKFIVAVPAALLLSGFATASQAATLDDVKERGNLNCGVNVGLAGFSAPDADGNWQGL 61 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DV+ CR ++SAIF DP + + PL AKERF ALQS +ID+LSRNT WT R+ SLGL F Sbjct: 62 DVETCRGIASAIFGDPDNVVFTPLTAKERFTALQSGEIDVLSRNTTWTATRDNSLGLNFT 121 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 T++DGQGF++ K I S+ L+GASIC+Q+GTT EL LADYF + +++ + F+ Sbjct: 122 ATTFYDGQGFMVSKDLNIESLEGLNGASICIQSGTTHELNLADYFPSRDIEIKTVTFDTP 181 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 ++ + RCD T D S L AL+L P IL +ISK PL P + QGD +W + Sbjct: 182 DQTAQGFAHGRCDVLTSDTSQLSALRLQLPEPDSVEILETLISKEPLGPVVRQGDDQWLD 241 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AMV AEE+G+ N++++ + NP V R LG K N GE LGL DW Y I Sbjct: 242 IVQWTIFAMVNAEEMGVNSDNVDEMRDNPPNPGVARLLG--KDGNYGEQLGLPNDWAYNI 299 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+++GNYGE+F +G S LKI RG NALW++GG++YAPPIR Sbjct: 300 IKNVGNYGEVFATTVGEDSPLKIQRGMNALWNEGGILYAPPIR 342 >gi|307546909|ref|YP_003899388.1| ABC transporter periplasmic protein [Halomonas elongata DSM 2581] gi|307218933|emb|CBV44203.1| ABC-type transport system periplasmic substrate-binding protein [Halomonas elongata DSM 2581] Length = 342 Score = 348 bits (894), Expect = 6e-94, Method: Compositional matrix adjust. Identities = 158/314 (50%), Positives = 213/314 (67%), Gaps = 2/314 (0%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 ++K+RG L CG+N GL GF+ +G W+G DV+ CRA+SSAIF DP K+ + PL AKER Sbjct: 31 EVKERGELHCGVNVGLAGFSSSDEDGTWQGLDVETCRAVSSAIFGDPEKVAFTPLTAKER 90 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 F ALQS +ID+LSRNT WT R+ SLGL F T++DGQGF++ K+ GI S+ L GASI Sbjct: 91 FTALQSGEIDVLSRNTTWTATRDNSLGLNFTATTFYDGQGFMVDKELGIESLEDLDGASI 150 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 C+Q+GTT EL LADYF + N+ + F+ ++ + + RCD T D S L AL+L Sbjct: 151 CIQSGTTHELNLADYFPSRNIDIKTVTFDTPDQTAQGFASGRCDVLTSDTSQLSALRLQL 210 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 P IL ++ISK PL P + QGD +W+NI+ WT +AMV AEE+G+ N++++ +D Sbjct: 211 PEPDSVEILTELISKEPLGPVVRQGDDQWFNIIKWTIFAMVNAEEMGVNSDNVDEMKQDP 270 Query: 269 TNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNA 328 NP V R LG+D + GE LGL DW Y II +GNYGE+F +G S L I RG NA Sbjct: 271 PNPGVARLLGVDGT--YGEQLGLGNDWAYNIISQVGNYGEVFADTVGENSPLGISRGMNA 328 Query: 329 LWSKGGLMYAPPIR 342 LW++GG++YAPP+R Sbjct: 329 LWNEGGILYAPPVR 342 >gi|115522563|ref|YP_779474.1| extracellular solute-binding protein [Rhodopseudomonas palustris BisA53] gi|115516510|gb|ABJ04494.1| extracellular solute-binding protein, family 3 [Rhodopseudomonas palustris BisA53] Length = 347 Score = 348 bits (893), Expect = 6e-94, Method: Compositional matrix adjust. Identities = 156/311 (50%), Positives = 220/311 (70%), Gaps = 3/311 (0%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 +R + CG+N GL GF+ G W GFDVDFCRA+++AIFDDP K++++ L+A ERF Sbjct: 40 RRDAVLCGVNKGLPGFSIPDDKGSWTGFDVDFCRAVAAAIFDDPKKVKFVALDANERFKE 99 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151 LQS+++DILSRN+ W++ RE L F + Y+DG GF++ + I S +L G+ +CVQ Sbjct: 100 LQSRKVDILSRNSTWSMARETGFELYFPAVAYYDGAGFMLPASRKIDSALELDGSQVCVQ 159 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 TTT+L +AD+F+A+N+KY + ++EE+ AY A +C+ + DIS LYAL++ +P Sbjct: 160 DATTTQLNVADFFRANNLKYQEVKAAKLEEVVKAYEAGQCNVLSADISQLYALRVNFAKP 219 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 +H ILPD+ISK PLAP + Q D +W IV WT YAM+ AEELG++ NI++ K + P Sbjct: 220 IDHTILPDVISKEPLAPVVRQRDDDWMMIVKWTLYAMINAEELGVSSTNIDEALK-SKKP 278 Query: 272 DVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWS 331 DV R +G + + GE LGL+KDW RIIRH+GNYGE+++RN+G+ S+L IPRG N LWS Sbjct: 279 DVMRLVGTEGA--YGEELGLSKDWAARIIRHVGNYGEVYERNVGSDSKLGIPRGLNQLWS 336 Query: 332 KGGLMYAPPIR 342 GG+ YAPPIR Sbjct: 337 AGGIQYAPPIR 347 >gi|90409066|ref|ZP_01217191.1| general L-amino acid-binding protein [Psychromonas sp. CNPT3] gi|90309823|gb|EAS37983.1| general L-amino acid-binding protein [Psychromonas sp. CNPT3] Length = 337 Score = 348 bits (892), Expect = 9e-94, Method: Compositional matrix adjust. Identities = 158/320 (49%), Positives = 221/320 (69%), Gaps = 3/320 (0%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 +A L + K G L CG++TG+ GF+ + G WKG DVDFCR+++SA+ D SK++Y+P Sbjct: 21 SADTLAKVLKNGTLHCGVSTGIPGFSATDSKGVWKGIDVDFCRSVASAVLGDASKVKYIP 80 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 L AKERF ALQS +ID+L R++ WT R+ SLGL F + Y+DGQGF++ K ++S Sbjct: 81 LTAKERFTALQSGEIDVLVRSSTWTATRDTSLGLNFAGVNYYDGQGFLVKKSLNVNSAKD 140 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L GA+ C+QAGTTTEL L DYFK++NM+Y + ++ + ++ RCDA T D S LY Sbjct: 141 LDGATFCIQAGTTTELNLTDYFKSNNMQYKAVTYDTSGQTIDGFKKGRCDAVTSDASQLY 200 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 LKL P ++LP+IISK PL P + QGD +W+N+V WT +A ++AEELG+T N++ Sbjct: 201 GLKLKMKDPQSVMVLPEIISKEPLGPVVRQGDDKWFNVVRWTLFASISAEELGVTTANVD 260 Query: 263 QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKI 322 + K + NP V+R LGI S G LGL++ W Y II+++GNYGE+F+RN+G++S L I Sbjct: 261 TMLK-SKNPSVKRLLGI--SGKTGADLGLSEKWAYNIIKNVGNYGEVFERNVGSKSPLNI 317 Query: 323 PRGYNALWSKGGLMYAPPIR 342 RG N LW+ GGLMY PIR Sbjct: 318 KRGLNNLWNNGGLMYPMPIR 337 >gi|119383545|ref|YP_914601.1| cationic amino acid ABC transporter, periplasmic binding protein [Paracoccus denitrificans PD1222] gi|119373312|gb|ABL68905.1| L-aspartate-binding protein / L-glutamate-binding protein / L-glutamine-binding protein / L-asparagine-binding protein [Paracoccus denitrificans PD1222] Length = 341 Score = 348 bits (892), Expect = 9e-94, Method: Compositional matrix adjust. Identities = 157/338 (46%), Positives = 224/338 (66%), Gaps = 2/338 (0%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 FF S+ + + + + L ++K RG L CG+NTGL+GFA ANG+W GFDV FC Sbjct: 6 FFGSVTAVALAASGALAAEGDTLKEVKARGVLNCGVNTGLIGFAAPDANGNWSGFDVAFC 65 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 +A+++A+ D +KI+Y+P + RF AL S ++D+L+RN+ WT R+ L L F + Y+ Sbjct: 66 KAMAAAVLGDATKIKYVPTTGQTRFTALSSGEVDLLARNSTWTFQRDTDLKLDFIGVNYY 125 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 DGQGF++ K G+SS +L+GA+IC+Q GTTTEL LADYFKA+NM Y P+ + E + Sbjct: 126 DGQGFMVRKDLGVSSAKELNGATICIQTGTTTELNLADYFKANNMDYQPVNIDSNAEGEQ 185 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 Y A CDAYT D S L A + + P H+ILP+IISK PL PA+ GD W +I WT Sbjct: 186 QYMAGACDAYTTDASGLAATRASFADPENHIILPEIISKEPLGPAVRHGDNNWGDIARWT 245 Query: 245 HYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMG 304 YA++ AEE G+T NI++++K + NP+VQR LG + ++G+ +GL +W R I+ G Sbjct: 246 LYALIAAEEYGVTSANIDELAKSSQNPEVQRLLGT--TDDLGKMIGLDAEWAKRAIKAGG 303 Query: 305 NYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 NYGE+F +G Q+ + + RG NA W++GGLMYA P R Sbjct: 304 NYGEIFAATIGEQTPIGLARGLNAQWTQGGLMYAMPFR 341 >gi|24114551|ref|NP_709061.1| putative periplasmic binding transport protein [Shigella flexneri 2a str. 301] gi|24053744|gb|AAN44768.1| putative periplasmic binding transport protein [Shigella flexneri 2a str. 301] gi|281602643|gb|ADA75627.1| putative periplasmic binding transport protein [Shigella flexneri 2002017] Length = 341 Score = 347 bits (891), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 152/319 (47%), Positives = 222/319 (69%), Gaps = 2/319 (0%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + L ++K+GF++CGI+ GL F+ A+G + G DVD CR +++A+F D +K++Y PL Sbjct: 25 GATLDAVQKKGFVQCGISDGLPRFSYADADGKFSGIDVDVCRGVAAAVFGDDTKVKYTPL 84 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 AKERF ALQS ++D+LSRNT WT R+ +G+AF +TY+DG GF+ H K G+ S +L Sbjct: 85 TAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKEL 144 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R +E A + RCD D S LYA Sbjct: 145 DGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYA 204 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 L++ P+E ++LP++ISK PL P + +GD EW++IV WT +AM+ AEE+GI +N+++ Sbjct: 205 LRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDE 264 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 + + PD+ LG K + G+ L L W Y II+ + NY E+F+RN+G++S LKI Sbjct: 265 KAANPATPDMAHLLG--KEGDYGKDLKLDNKWAYNIIKQVSNYSEIFERNVGSESPLKIK 322 Query: 324 RGYNALWSKGGLMYAPPIR 342 RG N LW+ GG+ YAPP+R Sbjct: 323 RGQNNLWNNGGIQYAPPVR 341 >gi|292486754|ref|YP_003529624.1| putative ABC transporter periplasmic protein [Erwinia amylovora CFBP1430] gi|292900844|ref|YP_003540213.1| ABC transporter substrate-binding protein [Erwinia amylovora ATCC 49946] gi|291200692|emb|CBJ47825.1| ABC transporter, substrate-binding protein [Erwinia amylovora ATCC 49946] gi|291552171|emb|CBA19208.1| putative ABC transport system, periplasmic component [Erwinia amylovora CFBP1430] gi|312170822|emb|CBX79082.1| putative ABC transport system, periplasmic component [Erwinia amylovora ATCC BAA-2158] Length = 341 Score = 346 bits (888), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 161/343 (46%), Positives = 229/343 (66%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K +++ LF + +A + L IKK+GF++CGI+ GL GF+ ANG + G Sbjct: 1 MKKMMLSTLVTAAALFTLANQAHAGTTLDAIKKKGFIQCGISDGLPGFSYADANGKFSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CRA ++A+ D K++Y PL AKERF ALQS ++DILSRNT WT R+ +G F Sbjct: 61 DVDVCRAAAAAVLGDAGKVKYTPLTAKERFTALQSGEVDILSRNTTWTSARDGGMGFIFA 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Y+DG GF+ H+K G+ S +L GA++C+QAGT TEL +ADYFKA+ M+Y P+ F+R Sbjct: 121 GVNYYDGIGFLTHQKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMQYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ +P + ++LP++ISK PL P + + D +W+ Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDDFIVLPEVISKEPLGPVVRRDDDDWFT 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV W+ YAM+ AEE+GIT KN++ +S +NPD+ LG + + G+ L L W Y I Sbjct: 241 IVKWSLYAMLNAEEMGITSKNVDSMSAKPSNPDMAHLLGAE--GDYGKDLKLGNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+FDRN+G S+LKI RG NALW+ GG+ YAPP+R Sbjct: 299 IKQVGNYQEVFDRNVGKDSQLKIVRGQNALWNNGGIQYAPPVR 341 >gi|330999032|ref|ZP_08322757.1| general L-amino acid-binding periplasmic protein AapJ [Parasutterella excrementihominis YIT 11859] gi|329575774|gb|EGG57300.1| general L-amino acid-binding periplasmic protein AapJ [Parasutterella excrementihominis YIT 11859] Length = 340 Score = 346 bits (888), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 149/342 (43%), Positives = 227/342 (66%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + L + L + + +L +K + CG+NT GF+ + G+W G D Sbjct: 1 MNQTILAGALSAVSLSLAAPAFAGPVLDKVKANDVVVCGVNTAAPGFSNADSKGNWTGLD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+CRAL++A+ D +K++++PLN+ +RF ALQ+ ++D+L+RNT W L R+ SLG F Sbjct: 61 VDYCRALAAAVLGDANKVKFVPLNSPQRFSALQAGEVDVLARNTTWNLTRDASLGAVFVG 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+DGQGF++ KK + S QL+GA+ICVQ+GT++E ++ADYFK+H MKY ++F+ E Sbjct: 121 TNYYDGQGFLVPKKLNVKSAKQLNGATICVQSGTSSEPSVADYFKSHGMKYKAVLFDTTE 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A+ + RC YT D+S L + P ++VILP++ISK PL P++ +GD EW+ I Sbjct: 181 ATQGAFLSGRCQVYTTDMSDLAGARTKAANPDDYVILPEVISKEPLGPSVRRGDNEWFQI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 W A + AEE GITQ N +++ K +T+P+V+R LG ++G+ LGL KDW+YRI+ Sbjct: 241 ARWVLNAFIEAEEKGITQANADELRKTSTDPNVKRLLG--SGEDMGKLLGLDKDWSYRIV 298 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE F+RNLG ++ L +PRG N W+ GG++YAPP+R Sbjct: 299 KQVGNYGESFERNLGPKTPLALPRGINNQWTNGGILYAPPVR 340 >gi|188532411|ref|YP_001906208.1| General L-amino ABC transporter binding protein [Erwinia tasmaniensis Et1/99] gi|188027453|emb|CAO95300.1| General L-amino ABC transporter binding protein [Erwinia tasmaniensis Et1/99] Length = 341 Score = 345 bits (886), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 160/343 (46%), Positives = 229/343 (66%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K +++ LF + +A + L IKK+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKMMLSTLVSAAALFSIANQAHAGTTLDAIKKKGFVQCGISDGLPGFSYADASGKFSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CRA ++A+ D K++Y PL AKERF ALQS ++DILSRNT WT R+ +G F Sbjct: 61 DVDVCRAAAAAVLGDAGKVKYTPLTAKERFTALQSGEVDILSRNTTWTSSRDGGMGFIFA 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Y+DG GF+ H+K G+ S +L GA++C+QAGT TEL +ADYFKA+ M+Y P+ F+R Sbjct: 121 GVNYYDGIGFLTHQKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMQYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ +P + ++LP++ISK PL P + + D +W+ Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDDFIVLPEVISKEPLGPVVRRDDNDWFT 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV W+ YAM+ AEE+GIT KN++ +S +NPD+ LG + + G+ L L W Y I Sbjct: 241 IVKWSLYAMLNAEEMGITSKNVDSLSAKPSNPDMSHLLGAE--GDFGKDLKLDNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+FDRN+G S+LKI RG NALW+ GG+ YAPP+R Sbjct: 299 IKQVGNYQEVFDRNVGKDSQLKIARGQNALWNNGGIQYAPPVR 341 >gi|158422580|ref|YP_001523872.1| extracellular solute-binding protein [Azorhizobium caulinodans ORS 571] gi|158329469|dbj|BAF86954.1| extracellular solute-binding protein [Azorhizobium caulinodans ORS 571] Length = 336 Score = 345 bits (886), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 153/319 (47%), Positives = 218/319 (68%), Gaps = 4/319 (1%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 A L +K RG L CG++TG+ GF++ + +G W GFDVDFCRA+++A+ +DP+K+ ++PL Sbjct: 22 AQTLKAVKDRGTLNCGVSTGIPGFSQ-QVDGKWSGFDVDFCRAVAAAVLNDPAKVNFVPL 80 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 NA++RF AL ++D+LSRNT WTL RE F +TYFDGQGF++ + I S +L Sbjct: 81 NAEDRFTALSGSKVDLLSRNTTWTLEREAKQKFLFGAVTYFDGQGFLVPAARKIESALEL 140 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 G+ +CVQ GTT DYFK +NMK + V+++ AY C+ + D+SALYA Sbjct: 141 DGSKVCVQVGTTAASYAEDYFKTNNMKLELVTLPTVQDLVKAYENGTCNTISTDVSALYA 200 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 L+ +P+ H++LPD+I+K PL P + QGD EW+N+V WTHY M+ EELG++ ++++ Sbjct: 201 LRTGFAKPASHIVLPDVITKEPLGPVVRQGDDEWFNVVKWTHYVMINGEELGVSSLSLDE 260 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 K + PDV+R +G D + G LGLTKD+ RIIR +GNYGE F+RN+G S+L IP Sbjct: 261 ALK-SQKPDVKRLVGTD--GDFGTELGLTKDFAVRIIRAVGNYGEAFERNIGTGSKLAIP 317 Query: 324 RGYNALWSKGGLMYAPPIR 342 RG N LWS GG+ YAPP+R Sbjct: 318 RGVNQLWSAGGIQYAPPVR 336 >gi|262274329|ref|ZP_06052140.1| amino acid ABC transporter amino acid-binding protein [Grimontia hollisae CIP 101886] gi|262220892|gb|EEY72206.1| amino acid ABC transporter amino acid-binding protein [Grimontia hollisae CIP 101886] Length = 381 Score = 345 bits (886), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 154/318 (48%), Positives = 220/318 (69%), Gaps = 3/318 (0%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 + L +KK G + CG+ TGL GF+ +NG W+G DV+FC+A+++A+ D K++Y+PL Sbjct: 67 NTLEKVKKSGVISCGVGTGLPGFSNPNSNGAWEGIDVEFCQAMAAAVLGDKDKVKYVPLT 126 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 AKERF ALQS +IDILSRNT WTL R+ +LGL F + Y+DGQGF++ K G+ S +L Sbjct: 127 AKERFTALQSGEIDILSRNTTWTLQRDGTLGLNFVGVNYYDGQGFMVKKDLGVKSALELD 186 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 GAS+CVQ+GTTTEL L+DYF+++ M + P+V++ + + + RCD T D S LYA Sbjct: 187 GASVCVQSGTTTELNLSDYFRSNGMSFKPVVYDTYDATVKGFESGRCDTLTTDQSGLYAS 246 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 ++ P V+LP+IISK PL P + QGD W+NI WT M+ EE GIT N++++ Sbjct: 247 RIKLADPDSAVVLPEIISKEPLGPVVRQGDDNWFNIAKWTLNTMINGEEFGITSANVDEM 306 Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324 ++ +P+++R LG D G+ LGL DW Y++I+ +GNYGE F R +G+ S L+I R Sbjct: 307 V-NSKDPNIRRILGQDGPK--GKGLGLNDDWGYQVIKQVGNYGESFQRTVGSGSPLQISR 363 Query: 325 GYNALWSKGGLMYAPPIR 342 G NALWS+GG++YAPPIR Sbjct: 364 GVNALWSEGGILYAPPIR 381 >gi|154248466|ref|YP_001419424.1| extracellular solute-binding protein [Xanthobacter autotrophicus Py2] gi|154162551|gb|ABS69767.1| extracellular solute-binding protein family 3 [Xanthobacter autotrophicus Py2] Length = 336 Score = 345 bits (886), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 155/335 (46%), Positives = 230/335 (68%), Gaps = 4/335 (1%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 + + L + + NA+ L ++K RG + CG++ GL GF+ +W G DVDFCRA++ Sbjct: 5 LFAAVGLLSLAGAVNAATLDEVKARGSVNCGVSQGLPGFSSPNDKNEWGGLDVDFCRAIA 64 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 +AIF+DP+K+++ PL+AK+RF AL S ID+LSRNT WT+ R+ +LG F + Y+DGQG Sbjct: 65 AAIFNDPAKVKFSPLSAKDRFTALTSGAIDVLSRNTTWTMSRDTTLGFNFAGVIYYDGQG 124 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV-FERVEEIDAAYR 187 F++ K G+ S +L GASICVQ GT+ EL ++D+F+++NMK ++ F ++E AY Sbjct: 125 FLVRKALGLKSAKELQGASICVQTGTSNELNVSDFFRSNNMKNGEVIAFGTIDETVKAYE 184 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 + RCD +T D S L A++L ++HVILP+ ISK PL P + GD +W+++V W ++A Sbjct: 185 SGRCDVFTADRSQLAAVRLKLTNAADHVILPETISKEPLGPLVRHGDDQWFDLVKWVYFA 244 Query: 248 MVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYG 307 ++ AEELG+TQKN+++ ++ NPDV+R LG D GE +GLT DW RII+ GNYG Sbjct: 245 LLNAEELGVTQKNVDE-QVNSQNPDVKRLLGTD--GKYGEGIGLTADWAVRIIKATGNYG 301 Query: 308 EMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 E++DRN+G + L I RG N LW+KGG+ Y P+R Sbjct: 302 EIYDRNVGPATPLGIERGLNNLWNKGGIQYGMPVR 336 >gi|150397777|ref|YP_001328244.1| extracellular solute-binding protein [Sinorhizobium medicae WSM419] gi|150029292|gb|ABR61409.1| extracellular solute-binding protein family 3 [Sinorhizobium medicae WSM419] Length = 336 Score = 345 bits (886), Expect = 5e-93, Method: Compositional matrix adjust. Identities = 156/322 (48%), Positives = 228/322 (70%), Gaps = 3/322 (0%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 +T A+ L +K+RG L+CG++ G++GF+ G+W GFD+DFCRA+++A D +++Y Sbjct: 18 ATQAATLDVVKQRGELRCGVSQGVLGFSAPDDKGEWSGFDIDFCRAVAAAALGDADQVKY 77 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +PL+ KERF ALQS ++D+LSR T WTL R+ LG++F +TY+DGQ F++ G+ SV Sbjct: 78 VPLSTKERFTALQSGEVDLLSRQTTWTLSRDTDLGMSFVGVTYYDGQAFMVRDDIGVKSV 137 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 +LSGAS+C + GTTTE +ADYF A+ ++Y I FE+ ++ A+ A RCD Y+ D SA Sbjct: 138 KELSGASVCTETGTTTEQNMADYFSANKIEYKVIAFEKADQTIQAFNAGRCDVYSTDASA 197 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 LY+ ++T + P V+LP++ISK PL PA+ QGD +W+ +V WT +AMV AEELGIT ++ Sbjct: 198 LYSQRMTLNDPDRFVVLPEVISKEPLGPAVRQGDDQWFKVVRWTLFAMVEAEELGITLES 257 Query: 261 INQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSEL 320 + + T +RFLG+D + G ALGL DW Y+++ +GNYGE+F+R+LG S L Sbjct: 258 AASLLESGTVAQ-KRFLGVDNEA--GRALGLNPDWAYQVVSAVGNYGEIFERHLGQASAL 314 Query: 321 KIPRGYNALWSKGGLMYAPPIR 342 KI RG N LW+ GGL+YAPP+R Sbjct: 315 KIDRGLNKLWNAGGLIYAPPVR 336 >gi|308188311|ref|YP_003932442.1| amino-acid ABC transporter-binding protein yhdW precursor [Pantoea vagans C9-1] gi|308058821|gb|ADO10993.1| Putative amino-acid ABC transporter-binding protein yhdW precursor [Pantoea vagans C9-1] Length = 341 Score = 345 bits (885), Expect = 5e-93, Method: Compositional matrix adjust. Identities = 155/319 (48%), Positives = 219/319 (68%), Gaps = 2/319 (0%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + L IKK+GF++CGI+ GL GF+ A G + G DVD CRA ++A+F D +K++Y PL Sbjct: 25 GTTLDAIKKKGFVQCGISDGLPGFSYADAGGKFTGIDVDVCRAAAAAVFGDATKVKYTPL 84 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 AKERF ALQS ++D+LSRNT WT R+ +G F + Y+DG GF+ H+K G+ S +L Sbjct: 85 TAKERFTALQSGEVDVLSRNTTWTSSRDGGMGFLFAGVNYYDGIGFLTHQKAGLKSAKEL 144 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 GA++C+QAGT TEL +AD+FKA+ M+Y P+ F+R +E A + RCD D S LYA Sbjct: 145 DGATVCIQAGTDTELNVADFFKANKMQYTPVTFDRSDESAKALDSGRCDTLASDQSQLYA 204 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 L++ +P E ++LP++ISK PL P + +GD +W+ IV W+ YAM+ AEE+GI KN++Q Sbjct: 205 LRIKLGKPDEFIVLPEVISKEPLGPLVRRGDDDWFTIVKWSLYAMLNAEEMGINSKNVDQ 264 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 ++ T PD+ LG + + G+ L L W Y II+ +GNY E FDRN+G S LKI Sbjct: 265 MTAKPTTPDMAHLLGAE--GDFGKDLKLDNKWAYNIIKQVGNYQESFDRNVGKDSALKIA 322 Query: 324 RGYNALWSKGGLMYAPPIR 342 RG NALW++GG+ YAPP+R Sbjct: 323 RGQNALWNQGGIQYAPPVR 341 >gi|153011796|ref|YP_001373009.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC 49188] gi|151563684|gb|ABS17180.1| extracellular solute-binding protein family 3 [Ochrobactrum anthropi ATCC 49188] Length = 335 Score = 345 bits (884), Expect = 7e-93, Method: Compositional matrix adjust. Identities = 155/313 (49%), Positives = 223/313 (71%), Gaps = 3/313 (0%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 IK+RG ++CG++ G++GF+ NG W GFDVDFCRA+++A +P K+ Y+PL+ K+RF Sbjct: 26 IKERGEVRCGVSQGVLGFSVPDKNGVWGGFDVDFCRAVAAATLGNPDKVAYVPLSTKDRF 85 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 ALQS ++D+LSR T WTL R+ LG++F + Y+DGQ F+++K+ G+ SV ++SGAS+C Sbjct: 86 TALQSGEVDLLSRQTTWTLSRDTDLGMSFVGVNYYDGQAFMVNKEVGVKSVKEISGASVC 145 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 + GTTTE +ADYF A+ ++Y I FE+ ++ A+ RCD Y+ D SALYA +LT + Sbjct: 146 TETGTTTEQNMADYFSANKIEYQVIAFEKPDQTIQAFNTGRCDVYSTDASALYAQRLTLN 205 Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 P V+LP++ISK PL PA+ QGD +W+ IV WT +A++ AEE+GIT++N + + T Sbjct: 206 DPDRFVVLPEVISKEPLGPAVRQGDDQWFKIVRWTLFALIEAEEMGITKENAASLLESGT 265 Query: 270 NPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNAL 329 +RFLG++ S G+A+GL W Y+ I +GNYGE+F+R+LG S LKI RG N L Sbjct: 266 VAQ-KRFLGVE--SEAGKAMGLDAKWAYQAISAVGNYGEIFERHLGKDSPLKIDRGLNRL 322 Query: 330 WSKGGLMYAPPIR 342 WS GGLMYAPP R Sbjct: 323 WSDGGLMYAPPAR 335 >gi|323139262|ref|ZP_08074316.1| extracellular solute-binding protein family 3 [Methylocystis sp. ATCC 49242] gi|322395483|gb|EFX98030.1| extracellular solute-binding protein family 3 [Methylocystis sp. ATCC 49242] Length = 343 Score = 344 bits (883), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 156/344 (45%), Positives = 239/344 (69%), Gaps = 5/344 (1%) Query: 1 MYKDFFVSILCLIILFFTSFS--TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M++ + L L+I F + + AS L +K+ G L CG++ G+VGF+ G+W G Sbjct: 3 MFQKRVRASLSLLIASFCLLAAPSQASTLDSVKQSGALACGVSNGIVGFSIADDKGNWSG 62 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVDFCRA++SAIF D SK++++P+ +ERF AL+S + D+LSRN+ W E+ GL F Sbjct: 63 FDVDFCRAVASAIFGDASKLRFVPVGTEERFEALKSGKFDLLSRNSTWAFSNEVDQGLIF 122 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 +T++DGQGF++ K + I+S +L+G+ +CV++ TTTE +AD+FK ++M + P+ FE Sbjct: 123 AGVTFYDGQGFLVPKSRKIASALELNGSKVCVKSATTTEANVADFFKQNHMSFEPVRFET 182 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + EI AY A +C+A + DIS L+A+KL +P++++IL D+ISK PL P + QGD +W Sbjct: 183 LAEIIKAYDAGQCNAISSDISQLHAIKLELKKPADNLILADVISKEPLGPVVRQGDDQWL 242 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298 N+V W +AM+ AEELG++ NI Q +K + P V+RF+G + +IG+ LGL+ DW Sbjct: 243 NLVKWVIFAMLNAEELGVSSSNIEQ-AKKSQKPAVRRFIGAE--GDIGKQLGLSPDWALN 299 Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I++++GNYGE+ +RN+G +S+L I RG N LWS GG+ YAPP+R Sbjct: 300 IVKNVGNYGEVLERNVGKKSKLGIARGLNQLWSMGGVQYAPPLR 343 >gi|326797351|ref|YP_004315171.1| ABC-type transporter periplasmic subunit family 3 [Marinomonas mediterranea MMB-1] gi|326548115|gb|ADZ93335.1| ABC-type transporter, periplasmic subunit family 3 [Marinomonas mediterranea MMB-1] Length = 340 Score = 344 bits (882), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 148/324 (45%), Positives = 223/324 (68%), Gaps = 2/324 (0%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 S + A+ L D+K +GF++CG++ G+ GF+ G+W G DVD CRA ++A+F D + Sbjct: 19 SATAGAATLDDVKSKGFIQCGVSQGVPGFSNADEAGNWSGIDVDACRAAAAAVFGDAQAV 78 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 ++ PL+AKERF ALQS +ID+LSRNT WT R+ +LGL F + ++DGQGF++ G++ Sbjct: 79 KFTPLSAKERFTALQSGEIDMLSRNTTWTYTRDTALGLDFTAVNFYDGQGFMVRNDLGVT 138 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 S +L GA++C + GTTTEL +AD+F+ H + Y P++ ++ +E AAY + RCD +T D Sbjct: 139 SAMELDGATVCTEQGTTTELNMADFFRKHGLSYVPVIVQKADEALAAYASGRCDVFTTDK 198 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 S L A + PS HVILP+ ISK PL P + GD +W +IV+W + V AEE+GI+ Sbjct: 199 SGLAAHRSKLADPSAHVILPETISKEPLGPVVRHGDNQWKDIVTWAMFVQVNAEEMGISS 258 Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318 KN+ ++ ++ +P ++R LG + N+GE+LGL DW Y II +GNYGE+F+ N+G + Sbjct: 259 KNVAKIKAESKDPAIRRLLGAE--GNMGESLGLGADWAYDIIAEVGNYGEVFENNVGPNT 316 Query: 319 ELKIPRGYNALWSKGGLMYAPPIR 342 + +PRG N LW++GG+MYAPP+R Sbjct: 317 PVGLPRGINNLWTEGGVMYAPPVR 340 >gi|259906955|ref|YP_002647311.1| General L-amino ABC transporter binding protein [Erwinia pyrifoliae Ep1/96] gi|224962577|emb|CAX54032.1| General L-amino ABC transporter binding protein [Erwinia pyrifoliae Ep1/96] gi|283476749|emb|CAY72585.1| putative ABC transport system, periplasmic component [Erwinia pyrifoliae DSM 12163] gi|310766170|gb|ADP11120.1| General L-amino ABC transporter binding protein [Erwinia sp. Ejp617] Length = 341 Score = 344 bits (882), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 159/343 (46%), Positives = 229/343 (66%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K +++ LF + +A + L IKK+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKMMLSTLVTAAALFTLANQAHAGTTLDAIKKKGFIQCGISDGLPGFSYADASGKFSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CRA ++A+ D K++Y PL AKERF ALQS ++DILSRNT WT R+ +G F Sbjct: 61 DVDVCRAAAAAVLGDAGKVKYTPLTAKERFTALQSGEVDILSRNTTWTSARDGGMGFIFA 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Y+DG GF+ H+K G+ S +L GA++C+QAGT TEL +ADYFKA+ M+Y P+ F+R Sbjct: 121 GVNYYDGIGFLTHQKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMQYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ +P + ++LP++ISK PL P + + D +W+ Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDDFIVLPEVISKEPLGPVVRRDDDDWFT 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV W+ +AM+ AEE+GIT KN++ +S +NPD+ LG + + G+ L L W Y I Sbjct: 241 IVKWSLFAMLNAEEMGITSKNVDSMSAKPSNPDMAHLLGAE--GDFGKDLKLGNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+FDRN+G S+LKI RG NALW+ GG+ YAPP+R Sbjct: 299 IKQVGNYQEVFDRNVGKDSQLKIARGQNALWNNGGIQYAPPVR 341 >gi|84499808|ref|ZP_00998096.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Oceanicola batsensis HTCC2597] gi|84392952|gb|EAQ05163.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Oceanicola batsensis HTCC2597] Length = 339 Score = 344 bits (882), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 153/313 (48%), Positives = 211/313 (67%), Gaps = 3/313 (0%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K RG L CG++TGL GF+ ANG+W+GFDV CRA+++A+ DP+ ++++P K RF Sbjct: 29 KARGTLNCGVSTGLAGFSAPNANGEWEGFDVAVCRAVATAVLGDPNAVEFVPTTGKTRFT 88 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150 AL S +ID+L+RNT WTL R+ L F + Y+DGQGFI K G+SS +L GA++C+ Sbjct: 89 ALASGEIDMLARNTTWTLSRDADLKFTFIGVNYYDGQGFITPKALGVSSAKELDGATVCI 148 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 Q GTTTEL LAD+F+ +N+ Y P+ E E Y A CD YT D S L A + T + Sbjct: 149 QTGTTTELNLADFFRVNNISYEPVPIETNAEAQQQYLAGACDVYTTDASGLAATRATFET 208 Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT- 269 P++HVILP+IISK PL P + GD+EW ++V W+ AM+ AEELG+T N+ ++S TT Sbjct: 209 PTDHVILPEIISKEPLGPLVRHGDSEWGDVVRWSLNAMIAAEELGVTSANVEEMSSSTTD 268 Query: 270 NPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNAL 329 NP++ R LG + N+GE LGL DW II +GNYGE+F+ N+G + + + RG NA Sbjct: 269 NPEINRLLGTE--GNLGEMLGLEADWAKNIIMQVGNYGEVFEANIGESTPIGLARGLNAQ 326 Query: 330 WSKGGLMYAPPIR 342 W+ GGL+YAPP R Sbjct: 327 WTDGGLLYAPPFR 339 >gi|288962140|ref|YP_003452435.1| general L-amino acid transport system substrate-binding protein [Azospirillum sp. B510] gi|288914406|dbj|BAI75891.1| general L-amino acid transport system substrate-binding protein [Azospirillum sp. B510] Length = 353 Score = 344 bits (882), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 152/314 (48%), Positives = 229/314 (72%), Gaps = 4/314 (1%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 +K++G+++CG+N GL GF+ G W G DVD CRA+++A+F D K++Y PL+A++R Sbjct: 43 VKQKGYVQCGVNLGLYGFSAPDDKGKWSGLDVDMCRAVAAAVFGDAEKVKYTPLSAQQRL 102 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 ALQS +IDIL+RNT TL R+ + GL F P Y+DGQGF++ K G+ S QL+GA++C Sbjct: 103 PALQSGEIDILARNTTRTLTRDTANGLNFAPTNYYDGQGFMVSAKLGLKSAKQLNGATVC 162 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN- 208 V GTTTE ++DYF+A+ M + P+V E+ EE++ A+ A RCDA T D S L A++ Sbjct: 163 VLPGTTTEQNVSDYFRANKMTFKPVVIEKNEELNKAFFAGRCDALTSDASQLAAIRAAEV 222 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 P+++VILP++ISK PL+PAI QGD EW N+V+W YAMV AEE G+T + ++ + + Sbjct: 223 PNPADYVILPELISKEPLSPAIRQGDEEWTNLVTWAFYAMVQAEEKGLTSETVD-AALTS 281 Query: 269 TNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNA 328 +PDV+R LG+ ++ G+ALG+ ++W + II+ +GNY + ++RN+G S+LK+PRG NA Sbjct: 282 PDPDVKRLLGV--TAGNGKALGVEENWAFNIIKQVGNYAQSYERNVGAGSKLKMPRGQNA 339 Query: 329 LWSKGGLMYAPPIR 342 L+++GGLMYAPP++ Sbjct: 340 LYTEGGLMYAPPMK 353 >gi|89110028|ref|AP_003808.1| predicted amino-acid transporter subunit [Escherichia coli str. K-12 substr. W3110] gi|170082796|ref|YP_001732116.1| amino-acid ABC transporter periplasmic-binding protein [Escherichia coli str. K-12 substr. DH10B] gi|218702040|ref|YP_002409669.1| amino-acid ABC transporter periplasmic-binding protein [Escherichia coli IAI39] gi|254163203|ref|YP_003046311.1| putative amino-acid transporter subunit [Escherichia coli B str. REL606] gi|606209|gb|AAA58072.1| ORF_o305; frameshift upstream would extend start [Escherichia coli str. K-12 substr. MG1655] gi|85676059|dbj|BAE77309.1| predicted amino-acid transporter subunit [Escherichia coli str. K12 substr. W3110] gi|169890631|gb|ACB04338.1| predicted amino-acid transporter subunit; periplasmic-binding component of ABC superfamily [Escherichia coli str. K-12 substr. DH10B] gi|218372026|emb|CAR19884.1| amino-acid transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli IAI39] gi|242378802|emb|CAQ33594.1| yhdW, subunit of YhdW/YhdX/YhdY/YhdZ ABC transporter [Escherichia coli BL21(DE3)] gi|253975104|gb|ACT40775.1| predicted amino-acid transporter subunit [Escherichia coli B str. REL606] gi|253979260|gb|ACT44930.1| predicted amino-acid transporter subunit [Escherichia coli BL21(DE3)] gi|309703687|emb|CBJ03028.1| Putative ABC transporter, substrate-binding protein [Escherichia coli ETEC H10407] gi|315137851|dbj|BAJ45010.1| extracellular solute-binding protein [Escherichia coli DH1] Length = 305 Score = 343 bits (881), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 150/307 (48%), Positives = 216/307 (70%), Gaps = 2/307 (0%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 ++CGI+ GL GF+ A+G + G DVD CR +++A+F D +K++Y PL AKERF ALQS Sbjct: 1 MQCGISDGLPGFSYADADGKFSGIDVDICRGVAAAVFGDDTKVKYTPLTAKERFTALQSG 60 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 ++D+LSRNT WT R+ +G+AF +TY+DG GF+ H K G+ S +L GA++C+QAGT Sbjct: 61 EVDLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTD 120 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215 TEL +ADYFKA+NMKY P+ F+R +E A + RCD D S LYAL++ P+E + Sbjct: 121 TELNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPAEWI 180 Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 +LP++ISK PL P + +GD EW++IV WT +AM+ AEE+GI +N+++ + + PD+ Sbjct: 181 VLPEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAH 240 Query: 276 FLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGL 335 LG K + G+ L L W Y II+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ Sbjct: 241 LLG--KEGDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGI 298 Query: 336 MYAPPIR 342 YAPP+R Sbjct: 299 QYAPPVR 305 >gi|144899134|emb|CAM75998.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Magnetospirillum gryphiswaldense MSR-1] Length = 340 Score = 343 bits (881), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 152/314 (48%), Positives = 228/314 (72%), Gaps = 3/314 (0%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 +K +GF++CG+N GL GF+ G+W G DVD CRA+++A+F D SK++Y PL+A++R Sbjct: 29 VKAKGFVQCGVNLGLYGFSAPDDKGNWSGLDVDACRAVAAAVFGDASKVKYTPLSAQQRL 88 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 ALQS +ID+L+RNT WTL R+ + GL F Y+DGQGF++ K G+ + +L+GA++C Sbjct: 89 PALQSGEIDLLARNTTWTLSRDTANGLNFTVTNYYDGQGFMVPTKLGVKAAKELNGATVC 148 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN- 208 V GTTTE LAD+F+A+ M Y P+V E+ EE+ +A+ A RCD YT D S L A++ Sbjct: 149 VLPGTTTEQNLADWFRANKMTYKPVVIEKNEELASAFIAGRCDVYTSDASQLAAIRANEM 208 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 P++++ILP++ISK PLA A+ GD +W ++V W+ YAM+ AEE G+T N++Q++ + Sbjct: 209 PNPADYLILPELISKEPLAVAVRHGDDQWMDVVRWSIYAMIAAEEKGVTMANVDQMAASS 268 Query: 269 TNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNA 328 +P+++R LG+ ++ G+ALGL + W II+ +GNYGE FDRN+G+ S+LKI RG NA Sbjct: 269 PDPEIKRLLGV--TAGNGKALGLDEAWAKTIIKQVGNYGESFDRNVGSGSKLKIARGQNA 326 Query: 329 LWSKGGLMYAPPIR 342 L+++GGLMYAPP + Sbjct: 327 LYTQGGLMYAPPFK 340 >gi|281180310|dbj|BAI56640.1| amino acid ABC transporter substrate binding component [Escherichia coli SE15] Length = 305 Score = 343 bits (881), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 150/307 (48%), Positives = 216/307 (70%), Gaps = 2/307 (0%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 ++CGI+ GL GF+ A+G + G DVD CR +++A+F D +K++Y PL AKERF ALQS Sbjct: 1 MQCGISDGLPGFSYADADGKFSGIDVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSG 60 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 ++D+LSRNT WT R+ +G+AF +TY+DG GF+ H K G+ S +L GA++C+QAGT Sbjct: 61 EVDLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTD 120 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215 TEL +ADYFKA+NMKY P+ F+R +E A + RCD D S LYAL++ P+E + Sbjct: 121 TELNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPTEWI 180 Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 +LP++ISK PL P + +GD EW++IV WT +AM+ AEE+GI +N+++ + + PD+ Sbjct: 181 VLPEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAH 240 Query: 276 FLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGL 335 LG K + G+ L L W Y II+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ Sbjct: 241 LLG--KEGDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGI 298 Query: 336 MYAPPIR 342 YAPP+R Sbjct: 299 QYAPPVR 305 >gi|15803803|ref|NP_289837.1| putative periplasmic binding transport protein [Escherichia coli O157:H7 EDL933] gi|209920741|ref|YP_002294825.1| amino acid ABC transporter substrate binding component [Escherichia coli SE11] gi|218555833|ref|YP_002388746.1| amino-acid ABC transporter periplasmic-binding protein [Escherichia coli IAI1] gi|218696968|ref|YP_002404635.1| amino-acid transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli 55989] gi|218706883|ref|YP_002414402.1| amino-acid ABC transporter periplasmic-binding protein [Escherichia coli UMN026] gi|12517899|gb|AAG58397.1|AE005554_8 putative periplasmic binding transport protein [Escherichia coli O157:H7 str. EDL933] gi|13363614|dbj|BAB37564.1| putative periplasmic binding transport protein [Escherichia coli O157:H7 str. Sakai] gi|209757458|gb|ACI77041.1| putative periplasmic binding transport protein [Escherichia coli] gi|209757460|gb|ACI77042.1| putative periplasmic binding transport protein [Escherichia coli] gi|209757462|gb|ACI77043.1| putative periplasmic binding transport protein [Escherichia coli] gi|209757464|gb|ACI77044.1| putative periplasmic binding transport protein [Escherichia coli] gi|209757466|gb|ACI77045.1| putative periplasmic binding transport protein [Escherichia coli] gi|209914000|dbj|BAG79074.1| amino acid ABC transporter substrate binding component [Escherichia coli SE11] gi|218353700|emb|CAU99962.1| amino-acid transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli 55989] gi|218362601|emb|CAR00226.1| amino-acid transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli IAI1] gi|218433980|emb|CAR14897.1| amino-acid transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli UMN026] Length = 305 Score = 343 bits (880), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 150/307 (48%), Positives = 216/307 (70%), Gaps = 2/307 (0%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 ++CGI+ GL GF+ A+G + G DVD CR +++A+F D +K++Y PL AKERF ALQS Sbjct: 1 MQCGISDGLPGFSYADADGKFSGIDVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSG 60 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 ++D+LSRNT WT R+ +G+AF +TY+DG GF+ H K G+ S +L GA++C+QAGT Sbjct: 61 EVDLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTD 120 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215 TEL +ADYFKA+NMKY P+ F+R +E A + RCD D S LYAL++ P+E + Sbjct: 121 TELNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPAEWI 180 Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 +LP++ISK PL P + +GD EW++IV WT +AM+ AEE+GI +N+++ + + PD+ Sbjct: 181 VLPEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAH 240 Query: 276 FLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGL 335 LG K + G+ L L W Y II+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ Sbjct: 241 LLG--KEGDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGI 298 Query: 336 MYAPPIR 342 YAPP+R Sbjct: 299 QYAPPVR 305 >gi|163733776|ref|ZP_02141218.1| glutamate/glutamine/aspartate/asparagine-binding protein [Roseobacter litoralis Och 149] gi|161392887|gb|EDQ17214.1| glutamate/glutamine/aspartate/asparagine-binding protein [Roseobacter litoralis Och 149] Length = 338 Score = 343 bits (880), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 149/316 (47%), Positives = 215/316 (68%), Gaps = 2/316 (0%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L D+K RG L CG+ TGLVGFA A+G+W GFDV CRA+++A+ D + ++++P K Sbjct: 25 LDDVKARGTLNCGVTTGLVGFAAPNADGEWNGFDVAICRAVAAAVLGDATAVEFVPTTGK 84 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 RF AL S +ID+L+RNT WT R++ L F + Y+DGQGF++ K G++S +L GA Sbjct: 85 TRFTALASGEIDMLARNTTWTFSRDVDLKFTFVGVNYYDGQGFMVPKSLGVTSAKELDGA 144 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 ++C+Q GTTTEL LAD+F+A+N+ Y P+ E E Y A CD YT D S L A + Sbjct: 145 TVCIQTGTTTELNLADFFRANNISYEPVPIETNAEGQQQYLAGACDTYTTDASGLAATRA 204 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 T + P+EHV+LP+IISK PL P + GD EW ++V WT A++TAEELG+T N+++++ Sbjct: 205 TFENPTEHVLLPEIISKEPLGPLVRHGDDEWGDVVRWTLNALITAEELGVTSANVSEMAT 264 Query: 267 DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGY 326 + NP+V+R LG + + +GE LGL DW + I GNYGE+F +N+G ++ + + RG Sbjct: 265 GSNNPEVKRLLGSEGT--LGEMLGLEADWAMKAIATQGNYGEIFAKNIGEETPIALSRGL 322 Query: 327 NALWSKGGLMYAPPIR 342 NA W+ GGL+Y+PP R Sbjct: 323 NAQWTNGGLIYSPPFR 338 >gi|254504317|ref|ZP_05116468.1| hypothetical protein SADFL11_4356 [Labrenzia alexandrii DFL-11] gi|222440388|gb|EEE47067.1| hypothetical protein SADFL11_4356 [Labrenzia alexandrii DFL-11] Length = 338 Score = 343 bits (879), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 160/342 (46%), Positives = 231/342 (67%), Gaps = 7/342 (2%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K+ F S+ +F +AS L +K+ G+ CG++ G GF+ ++G+W G DVD Sbjct: 2 KNTFKSLAVAAAFSGAAFPASASTLERVKENGYFTCGVSQGNPGFSNPDSDGNWSGLDVD 61 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 +CRA+++A+ DP+ +++ PL++ ERF ALQS +ID+LSR T WT+ R+ +LG F + Sbjct: 62 YCRAIAAAVLGDPAAVKFRPLSSPERFTALQSGEIDVLSRTTTWTMSRDTNLGANFAGVM 121 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y+DGQ ++ K+ GI+S +L+GAS+C GTTTEL +AD+F+ +NM+Y + FE+ +E+ Sbjct: 122 YYDGQAMMVRKELGITSAMELAGASVCTATGTTTELNVADFFRVNNMEYEVVAFEKNDEV 181 Query: 183 DAAYRAHRCDAYTGDISALYA--LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 AY A RCD YT D S L+A LKLTN PSEH+ILP++ISK PL P + QGD +W NI Sbjct: 182 TQAYDAGRCDVYTTDKSGLHANRLKLTN--PSEHMILPEVISKEPLGPVVRQGDDQWLNI 239 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 WT ++ AEELG+TQ N+ + + + NP V+R +G++ N G ALGL +DW RII Sbjct: 240 AKWTLNVLINAEELGVTQANVADM-ESSDNPAVKRLIGVE--GNFGGALGLDQDWAVRII 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGE+F RN+G + L I RG NA W GG +YAPP+R Sbjct: 297 SAVGNYGEIFVRNVGVDTPLGIERGLNASWIDGGTLYAPPVR 338 >gi|218550552|ref|YP_002384343.1| amino-acid ABC transporter periplasmic-binding protein [Escherichia fergusonii ATCC 35469] gi|218358093|emb|CAQ90739.1| amino-acid transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia fergusonii ATCC 35469] Length = 305 Score = 343 bits (879), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 149/307 (48%), Positives = 216/307 (70%), Gaps = 2/307 (0%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 ++CGI+ GL GF+ A+G + G DVD CR +++A+F D +K++Y PL AKERF ALQS Sbjct: 1 MQCGISDGLPGFSYADADGKFSGIDVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSG 60 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 ++D+LSRNT WT R+ +G+AF +TY+DG GF+ H K G+ S +L GA++C+QAGT Sbjct: 61 EVDLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTD 120 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215 TEL +ADYFKA+NMKY P+ F+R +E A + RCD D S LYAL++ P+E + Sbjct: 121 TELNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPAEWI 180 Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 +LP++ISK PL P + +GD EW++IV WT +AM+ AEE+G+ +N+++ + + PD+ Sbjct: 181 VLPEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGVNSQNVDEKAANPATPDMAH 240 Query: 276 FLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGL 335 LG K + G+ L L W Y II+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ Sbjct: 241 LLG--KEGDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGI 298 Query: 336 MYAPPIR 342 YAPP+R Sbjct: 299 QYAPPVR 305 >gi|254512097|ref|ZP_05124164.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Rhodobacteraceae bacterium KLH11] gi|221535808|gb|EEE38796.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Rhodobacteraceae bacterium KLH11] Length = 346 Score = 342 bits (878), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 150/314 (47%), Positives = 213/314 (67%), Gaps = 2/314 (0%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 D+K RG L CG++TGLVGFA ANG W+GFDV CRA+++A+ D + ++++P K R Sbjct: 35 DVKARGKLNCGVSTGLVGFAAPDANGVWQGFDVALCRAVAAAVLGDANAVEFVPTTTKTR 94 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 F AL S +ID+LSRNT WT R+ L F + Y+DGQGF++ K G+ S +L GA + Sbjct: 95 FTALASGEIDMLSRNTTWTYSRDADLKFEFTGVNYYDGQGFMVPKALGVGSAKELDGARV 154 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 C+Q GTTTEL LAD+F+++N+ Y P+ E E Y A CD YT D SAL + + T Sbjct: 155 CIQTGTTTELNLADFFRSNNISYEPVPIETNAEAQQQYLAGACDVYTTDASALASTRATF 214 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 + P EH++LP+IISK PL P + G+ EW ++V WT A++TAEELG+T NI+++S + Sbjct: 215 ENPDEHILLPEIISKEPLGPLVRHGENEWGDVVRWTLNALITAEELGVTSANIDEMSAGS 274 Query: 269 TNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNA 328 NP+V R LG + N+GE +GL DW R I+ GNYGE+F +N+G ++ + + RG NA Sbjct: 275 NNPEVDRLLGTE--GNLGEMMGLDADWAARAIKAGGNYGELFAKNIGEETPIGLARGLNA 332 Query: 329 LWSKGGLMYAPPIR 342 W++GGL+Y+PP R Sbjct: 333 QWTEGGLLYSPPFR 346 >gi|88797541|ref|ZP_01113130.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Reinekea sp. MED297] gi|88779713|gb|EAR10899.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Reinekea sp. MED297] Length = 331 Score = 342 bits (877), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 156/318 (49%), Positives = 219/318 (68%), Gaps = 3/318 (0%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 AS L D++K GFLKCG++TG+ GF+ NG+W G DVD CRA+++A+ + K++Y+PL Sbjct: 16 ASTLNDVRKTGFLKCGVSTGIPGFSNPDRNGNWTGLDVDVCRAVAAAVLGNAEKVRYIPL 75 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 +RF ALQS +ID+LSR T WT R+ +L + F ++++DGQGF++ + GI S +L Sbjct: 76 TPGDRFNALQSGEIDVLSRITTWTHSRDTTLDIIFAGVSFYDGQGFMVREDAGIRSPQEL 135 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 GA+ICVQ GTTTE LADYF+ H ++Y P+ F + ++A RC A T D S LYA Sbjct: 136 DGAAICVQKGTTTEQNLADYFREHGLRYQPVSFTSSDRAINGFKAGRCSAVTSDRSQLYA 195 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 + D PS ILP +ISK PL PA+ Q D +WYNIV W +A+V AEELG+T N+++ Sbjct: 196 QRTKLDDPSSARILPTVISKEPLGPAVRQDDMQWYNIVKWCLFALVNAEELGVTSANVDE 255 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 + K + P VQR LG++ S+ G A+GL DW Y II +GNY E++D N+G SEL+I Sbjct: 256 MRK-SNKPVVQRLLGVN--SDTGRAMGLASDWGYNIISQVGNYQEIYDGNVGKDSELEID 312 Query: 324 RGYNALWSKGGLMYAPPI 341 RG N+LWSKGG+++APP+ Sbjct: 313 RGLNSLWSKGGILFAPPL 330 >gi|239815922|ref|YP_002944832.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] gi|239802499|gb|ACS19566.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] Length = 344 Score = 342 bits (877), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 154/317 (48%), Positives = 220/317 (69%), Gaps = 3/317 (0%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L +K+RG +KCG+ G+ GF+ G+W G DVD CRA+++A+ DP K+ ++PLN++ Sbjct: 30 LDAVKQRGTVKCGVTNGVAGFSAPDTQGNWSGLDVDTCRAIAAAVLGDPKKVDFVPLNSQ 89 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 +RF ALQ+ +IDIL+RNT WTL R+ SLG F ITY+DGQGF++ KK ++S QL A Sbjct: 90 QRFSALQAGEIDILARNTTWTLTRDASLGFNFTTITYYDGQGFLVPKKLKVTSAKQLKNA 149 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 +IC Q+GTT E ++DYF+A N+ +VFE E A+ + RC A+T D SAL L+ Sbjct: 150 TICTQSGTTNEKNVSDYFRAQNIPVKTVVFESFEASFKAFFSGRCQAFTTDASALAGLRN 209 Query: 207 TN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 P ++VILP++ISK PLAP + +GD EW+ I W A++ AEE G+TQ N +++ Sbjct: 210 KEAPNPDDYVILPELISKEPLAPLVRRGDDEWFAIAKWVPNALIEAEEFGVTQANADELK 269 Query: 266 KDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRG 325 + +P QR LG ++G+ LGL KDW++R I+ +GNYGEMF+RN+G +S LK+PRG Sbjct: 270 AGSKDPAQQRLLGA--GEDLGKLLGLDKDWSFRAIKAVGNYGEMFERNVGPKSVLKLPRG 327 Query: 326 YNALWSKGGLMYAPPIR 342 N LW+KGGL+YAPP+R Sbjct: 328 SNNLWNKGGLIYAPPVR 344 >gi|218691562|ref|YP_002399774.1| amino-acid ABC transporter periplasmic-binding protein [Escherichia coli ED1a] gi|218429126|emb|CAR10069.2| amino-acid transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli ED1a] Length = 305 Score = 342 bits (877), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 149/307 (48%), Positives = 216/307 (70%), Gaps = 2/307 (0%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 ++CGI+ GL GF+ A+G + G DVD CR +++A+F D +K++Y PL AKERF ALQS Sbjct: 1 MQCGISDGLPGFSYADADGKFSGIDVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSG 60 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 ++D+LSRNT WT R+ +G+AF +TY+DG GF+ H K G+ S +L GA++C+QAGT Sbjct: 61 EVDLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTD 120 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215 TEL +ADYFKA+NMKY P+ F+R +E A + RCD D S LYAL++ P+E + Sbjct: 121 TELNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPTEWI 180 Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 +LP++ISK PL P + +GD EW++IV WT +AM+ AEE+GI +N+++ + + PD+ Sbjct: 181 VLPEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAH 240 Query: 276 FLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGL 335 LG K + G+ L L W + II+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ Sbjct: 241 LLG--KEGDYGKDLKLDNKWAFNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGI 298 Query: 336 MYAPPIR 342 YAPP+R Sbjct: 299 QYAPPVR 305 >gi|218560337|ref|YP_002393250.1| amino-acid transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli S88] gi|218367106|emb|CAR04880.1| amino-acid transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli S88] Length = 305 Score = 342 bits (876), Expect = 6e-92, Method: Compositional matrix adjust. Identities = 149/307 (48%), Positives = 216/307 (70%), Gaps = 2/307 (0%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 ++CGI+ GL GF+ A+G + G DVD CR +++A+F D +K++Y PL AKERF ALQS Sbjct: 1 MQCGISDGLPGFSYADADGKFSGIDVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSG 60 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 ++D+LSRNT WT R+ +G+AF +TY+DG GF+ H K G+ S +L GA++C+QAGT Sbjct: 61 EVDLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTD 120 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215 TEL +ADYFKA+NMKY P+ F+R +E A + RCD D S LYAL++ P+E + Sbjct: 121 TELNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPAEWI 180 Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 +LP++ISK PL P + +GD EW++IV WT +AM+ AEE+GI +N+++ + + PD+ Sbjct: 181 VLPEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAH 240 Query: 276 FLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGL 335 LG K + G+ L L W + II+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ Sbjct: 241 LLG--KEGDYGKDLKLDNKWAFNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGI 298 Query: 336 MYAPPIR 342 YAPP+R Sbjct: 299 QYAPPVR 305 >gi|119897622|ref|YP_932835.1| putative amino acid-binding protein [Azoarcus sp. BH72] gi|119670035|emb|CAL93948.1| putative amino acid-binding protein [Azoarcus sp. BH72] Length = 344 Score = 342 bits (876), Expect = 6e-92, Method: Compositional matrix adjust. Identities = 159/332 (47%), Positives = 229/332 (68%), Gaps = 8/332 (2%) Query: 16 FFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI 71 F + S A+ L IK++G L CG+++G+ GF+ + G+W G DVD CRAL++A+ Sbjct: 16 FAATLSATAAHAGATLDQIKRKGELACGVSSGVPGFSATDSRGNWSGLDVDVCRALAAAV 75 Query: 72 FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131 D +K++++PL +++RF ALQ+ ++DILSRNT WTL R+ SLGLAF ITY+DGQGF++ Sbjct: 76 LGDANKVKWVPLGSQQRFSALQAGEVDILSRNTTWTLTRDASLGLAFTAITYYDGQGFLV 135 Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191 K ++S QL A ICVQ+GTTTE LADYF+ ++ P+VFE+ + A+ RC Sbjct: 136 PKSIKVTSAKQLRDAEICVQSGTTTEKNLADYFRRQGIRVKPVVFEKFDASLKAFFNGRC 195 Query: 192 DAYTGDISALYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 AYT D S+L ++ +P +++ILP+ ISK PL P + +GD EW+ IV W YA++ Sbjct: 196 VAYTTDASSLAGIRAGEAPKPDDYLILPETISKEPLGPIVRRGDDEWFTIVKWVVYALIE 255 Query: 251 AEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMF 310 AEELG+T+ N ++ + +P V R LG K+ ++G+ LGL W YR +R +GNYGE+F Sbjct: 256 AEELGVTRDNADKQAAG-GDPAVGRLLG--KTEDLGKPLGLDAQWAYRAVRAVGNYGEVF 312 Query: 311 DRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +RNLG S L++PRG NALWS+GGLMYAPP+R Sbjct: 313 ERNLGAGSPLRLPRGQNALWSQGGLMYAPPLR 344 >gi|296536584|ref|ZP_06898665.1| ABC superfamily ATP binding cassette transporter, amino acid binding protein [Roseomonas cervicalis ATCC 49957] gi|296263094|gb|EFH09638.1| ABC superfamily ATP binding cassette transporter, amino acid binding protein [Roseomonas cervicalis ATCC 49957] Length = 323 Score = 341 bits (875), Expect = 9e-92, Method: Compositional matrix adjust. Identities = 154/320 (48%), Positives = 221/320 (69%), Gaps = 7/320 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 A LG I+ RG + CG+ +GFA + G ++G D D+CRAL+ A+F D K +++P Sbjct: 10 ADTLGAIRARGHVLCGVTPNTIGFAAPDSQGVFRGLDADYCRALAVAVFGDADKARFVPT 69 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 A +RF ALQS ++D+L R T WTL RE +LG F + ++DG GF++ + G+ S QL Sbjct: 70 TAPQRFPALQSGEVDVLIRTTTWTLSREAALGFVFAGVNFYDGNGFMVRRALGVQSARQL 129 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 GAS+C+Q G+TTEL + DYF+AH M+ +P+ +E VEEI A+ A RCD Y+ D S L A Sbjct: 130 DGASVCLQQGSTTELNVTDYFRAHGMRLNPVTYENVEEIRTAFAAGRCDVYSSDTSTLAA 189 Query: 204 LKLTNDRPSEH-VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 + ++ V+LP+IISK PL PA+ +GD W++IV WTH+A++TAEELGITQ N+ Sbjct: 190 FRAGQGAAADQFVLLPEIISKEPLGPAVRKGDARWFDIVRWTHFALLTAEELGITQANLA 249 Query: 263 QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKI 322 + + D+T+PDVQRFLG +S ++G LGL DW RI+ +GN+GEM++RN+ + + I Sbjct: 250 RFA-DSTSPDVQRFLG--RSGDLGRMLGLQPDWAARIVGQLGNFGEMWERNI---TPMGI 303 Query: 323 PRGYNALWSKGGLMYAPPIR 342 RG NALW++GGL YAPP+R Sbjct: 304 QRGINALWTQGGLQYAPPMR 323 >gi|255264624|ref|ZP_05343966.1| glutamate/glutamine/aspartate/asparagine-binding protein bztAprecursor [Thalassiobium sp. R2A62] gi|255106959|gb|EET49633.1| glutamate/glutamine/aspartate/asparagine-binding protein bztAprecursor [Thalassiobium sp. R2A62] Length = 338 Score = 341 bits (875), Expect = 9e-92, Method: Compositional matrix adjust. Identities = 154/342 (45%), Positives = 220/342 (64%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ L + + + A+ L D+K RG L CG+ TGLVGFA A+G+W+GFD Sbjct: 1 MKKSVFLG--ALTVAGLAAGMSAAATLDDVKARGTLNCGVTTGLVGFAAPDASGEWEGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ D + ++++P K RF AL S +ID+L+RNT WT R++ L F Sbjct: 59 VGVCRAVAAAVLGDSNAVEFVPTTGKTRFTALASGEIDMLARNTTWTFSRDVDLKFEFVG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF+ K+ G+SS L GA++C+Q GTTTEL LAD+F+A+N+ Y P+ E Sbjct: 119 VNYYDGQGFMAPKELGVSSAKDLDGATVCIQTGTTTELNLADFFRANNISYEPVPIETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD +T D S L A + T + P +HV+LP+I+SK PL P + GD EW +I Sbjct: 179 EAQQQYLAGACDVFTTDASGLAATRATFENPGDHVLLPEIVSKEPLGPLVRHGDNEWGDI 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT A++TAEELG+T NI ++S T NP+V R LG + +G LGL W I Sbjct: 239 VRWTLNALITAEELGVTSANIGELSAGTNNPEVNRLLGTE--GELGGMLGLDAAWAKNAI 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F++N+G + + + RG NA+W++GGL+Y+PP R Sbjct: 297 MAGGNYGEIFEKNIGENTPIGLARGLNAMWTEGGLIYSPPFR 338 >gi|296387623|ref|ZP_06877098.1| putative amino acid-binding protein [Pseudomonas aeruginosa PAb1] Length = 305 Score = 340 bits (873), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 150/307 (48%), Positives = 218/307 (71%), Gaps = 2/307 (0%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 ++CG++ GL GF+ A G +KG DVD CRAL++A+F D K+++ PL+A ERF ALQS Sbjct: 1 MQCGVSDGLPGFSYADAKGRFKGLDVDICRALAAALFGDAEKVRFTPLSATERFSALQSG 60 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 +D+LSRNT WT R+ +LG+ F +TYFDGQGF++++K G+SS +L ++C+Q+GTT Sbjct: 61 TVDLLSRNTSWTSSRDTALGIHFTGVTYFDGQGFLVNRKLGVSSARELKDTTVCIQSGTT 120 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215 EL +ADYF+AH ++Y ++ + E+ A A +CD + D S LYA +L +P ++V Sbjct: 121 NELNVADYFRAHGIRYKAVLDDSYEKSARALEAGQCDVLSSDQSQLYAQRLKLAKPEQYV 180 Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 +LP++ISK PL PA+ QGD W+NIV WT Y ++ AEELG+T N+ + ++D+ NPDV R Sbjct: 181 VLPEVISKEPLGPAVRQGDEAWFNIVRWTLYGLLNAEELGVTSSNVERQARDSRNPDVAR 240 Query: 276 FLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGL 335 LG + G+ L L +DW +++R +GNYGE+F RN+G+ S LK+PRG NA W+ GGL Sbjct: 241 LLG--SEGDAGKDLQLPRDWVVQMVRQVGNYGEIFARNVGDGSPLKMPRGLNAQWNLGGL 298 Query: 336 MYAPPIR 342 YAPPIR Sbjct: 299 HYAPPIR 305 >gi|312959110|ref|ZP_07773629.1| extracellular solute-binding protein, family 3 [Pseudomonas fluorescens WH6] gi|311286880|gb|EFQ65442.1| extracellular solute-binding protein, family 3 [Pseudomonas fluorescens WH6] Length = 343 Score = 340 bits (873), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 159/338 (47%), Positives = 227/338 (67%), Gaps = 4/338 (1%) Query: 7 VSILCLI-ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 ++I+C +L + F+ + L ++K+GF++CG++ GL GF+ A+G G D D CR Sbjct: 8 LAIVCAAAVLGVSGFAQAGATLDAVQKKGFVQCGVSDGLPGFSVPDASGKILGIDADVCR 67 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP-ITYF 124 A+++A+F D +K+++ LNAKERF ALQS ++DILSRNT T R+ +GL F ITY+ Sbjct: 68 AVAAAVFGDATKVKFSQLNAKERFTALQSGEVDILSRNTTMTSSRDAGMGLKFPGFITYY 127 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 DG GF+++ K G+ S +L GA+IC+QAGTTTEL ++DYF+ + +KY PI F+ +E Sbjct: 128 DGIGFLVNNKLGVKSAKELDGATICIQAGTTTELNVSDYFRGNGLKYTPITFDTSDESAK 187 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + + RCD T D S L+A + P ++V+LP+ ISK PL P + GD EW IV W Sbjct: 188 SLESGRCDVLTSDKSQLFAQRSKLASPKDYVVLPETISKEPLGPVVRNGDDEWLAIVRWV 247 Query: 245 HYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMG 304 YAM+ AEE GIT KN+ +K T NPDV R LG D G+ L + KDW +I++ +G Sbjct: 248 GYAMLNAEEAGITSKNVEAEAKSTKNPDVARLLGAD--GEYGKDLKVKKDWVVQIVKQVG 305 Query: 305 NYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 NYGE+F+RNLG + L+I RG NALW+KGG+ YAPP+R Sbjct: 306 NYGEVFERNLGKSTPLEIDRGLNALWNKGGIQYAPPVR 343 >gi|87121084|ref|ZP_01076975.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Marinomonas sp. MED121] gi|86163576|gb|EAQ64850.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Marinomonas sp. MED121] Length = 340 Score = 340 bits (873), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 149/334 (44%), Positives = 222/334 (66%), Gaps = 2/334 (0%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 I + S A L D+K +GF++CG++ G+ GF+ +NG+W G DVD CRA + Sbjct: 9 ISTAAVALTVSAGATAGTLDDVKAKGFIQCGVSQGVPGFSNADSNGNWTGIDVDACRAAA 68 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 +A+F D K+++ PL+AKERF ALQS +ID+LSRNT WT R+ SLGL F + ++DGQG Sbjct: 69 AAVFGDAQKVKFTPLSAKERFTALQSGEIDVLSRNTTWTYTRDTSLGLDFTAVNFYDGQG 128 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 F++ K G+ S +L GA++C + GTTTEL +AD+F+ H ++Y P+V ++ +E AAY + Sbjct: 129 FMVRKDLGVDSALELDGATVCTEQGTTTELNMADFFRKHQLEYVPVVVQKADEALAAYAS 188 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 RCD +T D S L A + S HVIL + ISK PL P + GD +W +IV+W + Sbjct: 189 GRCDVFTTDKSGLAAHRSKLADSSAHVILDETISKEPLGPVVRHGDNQWKDIVTWAMFVQ 248 Query: 249 VTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGE 308 V AEE+GI+ N+ ++ +T +P ++R LG + ++G L L DW Y +I +GNYGE Sbjct: 249 VNAEEMGISSSNVAKIKAETKDPGIRRLLGAE--GDMGAQLSLPADWAYNVIAQVGNYGE 306 Query: 309 MFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +F+RN+G + + +PRG N LW++GG+MYAPP+R Sbjct: 307 VFERNVGPSTPVGLPRGINKLWTEGGVMYAPPVR 340 >gi|330811534|ref|YP_004355996.1| Putative amino acid ABC transporter, periplasmic component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379642|gb|AEA70992.1| Putative amino acid ABC transporter, periplasmic component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 343 Score = 340 bits (873), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 158/343 (46%), Positives = 225/343 (65%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + K + +L + F+ + L ++K+GF++CG++ GL GF+ + G G D Sbjct: 3 LLKSTLAVMTAAAVLGVSGFAQAGATLDAVQKKGFVQCGVSDGLPGFSVPDSTGKIVGID 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 DFCRA+++A+F D +K+++ LNAKERF ALQS +ID+LSRN+ T R+ +GL F Sbjct: 63 ADFCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDMLSRNSTMTSSRDAGMGLKFPG 122 Query: 121 -ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 ITY+DG GF+ + K G+ S +L GA+IC+QAGTTTEL ++DYF+A+ +KY PI F+ Sbjct: 123 FITYYDGIGFLANNKLGVKSAKELDGATICIQAGTTTELNVSDYFRANGLKYTPITFDTS 182 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E + + RCD T D S L+A + P ++V+LP+ ISK PL P + GD EW Sbjct: 183 DESAKSLESGRCDVLTSDKSQLFAQRSKLASPKDYVVLPETISKEPLGPVVRNGDDEWLA 242 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT YA++ AEE G+T KN+ +K T NPDV R LG D G+ L L KDW +I Sbjct: 243 IVRWTGYALLNAEEAGVTSKNVEAEAKSTKNPDVARMLGAD--GEYGKDLKLPKDWVVQI 300 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++ +GNYGEMF+RNLG + L+I RG NALW+ GG+ YAPP+R Sbjct: 301 VKQVGNYGEMFERNLGKGTPLEIDRGLNALWNAGGIQYAPPVR 343 >gi|56695433|ref|YP_165781.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Ruegeria pomeroyi DSS-3] gi|56677170|gb|AAV93836.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Ruegeria pomeroyi DSS-3] Length = 380 Score = 340 bits (873), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 150/314 (47%), Positives = 213/314 (67%), Gaps = 2/314 (0%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 D+K RG L CG+ TGLVGFA +NG+WKGFDV CRA+++A+ D + ++++P K R Sbjct: 69 DVKARGKLNCGVTTGLVGFAAPDSNGEWKGFDVALCRAVAAAVLGDGNAVEFVPTTGKTR 128 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 F AL S ++D+L+RNT WT R++ L F + Y+DGQGF++ K G+SS +L GA++ Sbjct: 129 FTALASGEVDMLARNTTWTFSRDVDLKFEFVGVNYYDGQGFMVPKSLGVSSAKELDGATV 188 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 C+Q GTTTEL LAD+F+A+N+ Y P+ E E Y A CD YT D S L A + T Sbjct: 189 CIQTGTTTELNLADFFRANNISYEPVPIETNAEAQQQYLAGACDVYTTDASGLAATRATF 248 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 + P +HV+LP+IISK PL P + GD EW ++V WT A+V+AEE+GIT NI+++S T Sbjct: 249 ENPGDHVLLPEIISKEPLGPLVRHGDHEWGDVVRWTLNALVSAEEMGITSANIDEMSAGT 308 Query: 269 TNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNA 328 NP++ R LG + + +GE LGL +W R I+ GNYGE+F +N+G + + + RG NA Sbjct: 309 NNPEINRILGSEGT--LGEMLGLDAEWAKRAIKVGGNYGEVFAQNIGESTPIGLARGLNA 366 Query: 329 LWSKGGLMYAPPIR 342 W+ GGL+Y+PP R Sbjct: 367 QWTDGGLLYSPPFR 380 >gi|149913099|ref|ZP_01901633.1| hypothetical protein RAZWK3B_03885 [Roseobacter sp. AzwK-3b] gi|149813505|gb|EDM73331.1| hypothetical protein RAZWK3B_03885 [Roseobacter sp. AzwK-3b] Length = 338 Score = 340 bits (872), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 149/316 (47%), Positives = 211/316 (66%), Gaps = 2/316 (0%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L D+K RG L CG+ TGLVGFA ANG+W+GFDV CRA+++A+ DP+ ++++P K Sbjct: 25 LDDVKARGKLNCGVTTGLVGFAAPDANGEWQGFDVGVCRAVAAAVLGDPTAVEFVPTTGK 84 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 RF AL S +ID+L+RNT WT R++ L F I Y+DGQGF++ K G++S +L GA Sbjct: 85 TRFTALASGEIDLLARNTTWTFSRDVDLKFEFVGINYYDGQGFMVPKSLGVTSAKELDGA 144 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 ++C+Q GTTTEL LAD+F+ +N+ Y P+ E E Y CD YT D S L A + Sbjct: 145 TVCIQTGTTTELNLADFFRVNNISYEPVPIETNAEAQPLYLEGACDVYTTDASGLAATRA 204 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 + PSEHVILP+IISK PL P + GD+EW +I WT A++ AEE G+T N+ +++ Sbjct: 205 AFETPSEHVILPEIISKEPLGPLVRHGDSEWGDIARWTLNALIAAEEYGVTSANVAELAN 264 Query: 267 DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGY 326 T NP++ R LG + + +GE LGL +W R I GNYGE+F++N+G + + + RG Sbjct: 265 GTDNPEINRLLGTEGT--LGEMLGLDAEWAKRAIMAGGNYGELFEKNIGENTPIGLSRGL 322 Query: 327 NALWSKGGLMYAPPIR 342 NA W++GGL+Y+PP R Sbjct: 323 NAQWTEGGLLYSPPFR 338 >gi|209966385|ref|YP_002299300.1| general L-amino acid-binding periplasmic protein AapJ [Rhodospirillum centenum SW] gi|209959851|gb|ACJ00488.1| general L-amino acid-binding periplasmic protein AapJ [Rhodospirillum centenum SW] Length = 353 Score = 340 bits (871), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 159/319 (49%), Positives = 223/319 (69%), Gaps = 5/319 (1%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L IK+RG L+CG+NTGL GF+ + G W G DVD C+A+++A D K+ Y PL+ Sbjct: 39 STLDQIKQRGVLRCGVNTGLAGFSTPDSQGRWTGLDVDVCKAIAAAALGDAGKVHYAPLS 98 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 A++R ALQS ++DILSRNT W+L R+ G+ F P+ Y+DGQGF++ K G++S QL Sbjct: 99 AQQRLTALQSGEVDILSRNTTWSLSRDTQ-GMNFGPVVYYDGQGFMVPKALGVTSAKQLD 157 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL-YA 203 GA++CVQ GTTTEL LADYF A+ M + P+V E +E+ AA+ + RCD +T D S L Sbjct: 158 GATVCVQTGTTTELNLADYFAANRMSFKPVVIESFDEVVAAFFSGRCDVFTTDGSQLASV 217 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 ++ P ++VILP+IISK PLAP + GD +W++IV WT YA++ AEE GIT N+++ Sbjct: 218 RAVSAAAPDDYVILPEIISKEPLAPVVRHGDDQWFDIVKWTVYALLEAEEKGITAANVDE 277 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 K + +P VQR LG+ +G++LGL W YR I+ +GNYGE+F+RN+G + L++ Sbjct: 278 -KKKSADPTVQRLLGV--QPGMGQSLGLDDAWAYRAIKAVGNYGEVFERNVGKATPLRLE 334 Query: 324 RGYNALWSKGGLMYAPPIR 342 RG NALW+ GGLMYAPP+R Sbjct: 335 RGLNALWTNGGLMYAPPVR 353 >gi|82778575|ref|YP_404924.1| putative periplasmic binding transport protein [Shigella dysenteriae Sd197] gi|81242723|gb|ABB63433.1| putative periplasmic binding transport protein [Shigella dysenteriae Sd197] Length = 305 Score = 340 bits (871), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 149/307 (48%), Positives = 215/307 (70%), Gaps = 2/307 (0%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 ++CGI+ GL F+ A+G + G DVD CR +++A+F D +K++Y PL AKERF ALQS Sbjct: 1 MQCGISDGLPRFSYADADGKFSGIDVDVCRGVAAAVFGDNTKVKYTPLTAKERFTALQSG 60 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 ++D+LSRNT WT R+ +G+AF +TY+DG GF+ H K G+ S +L GA++C+QAGT Sbjct: 61 EVDLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTD 120 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215 TEL +ADYFKA+NMKY P+ F+R +E A + RCD D S LYAL++ P+E + Sbjct: 121 TELNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPAEWI 180 Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 +LP++ISK PL P + +GD EW++IV WT +AM+ AEE+GI +N+++ + + PD+ Sbjct: 181 VLPEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAH 240 Query: 276 FLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGL 335 LG K + G+ L L W Y II+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ Sbjct: 241 LLG--KEGDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGI 298 Query: 336 MYAPPIR 342 YAPP+R Sbjct: 299 QYAPPVR 305 >gi|291619131|ref|YP_003521873.1| YhdW [Pantoea ananatis LMG 20103] gi|291154161|gb|ADD78745.1| YhdW [Pantoea ananatis LMG 20103] gi|327395461|dbj|BAK12883.1| putative amino-acid ABC transporter-binding protein YhdW precursor [Pantoea ananatis AJ13355] Length = 349 Score = 340 bits (871), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 152/316 (48%), Positives = 218/316 (68%), Gaps = 2/316 (0%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L IKK+GF++CGI+ GL GF+ A+G + G DVD CRA ++A+F D +K++Y PL AK Sbjct: 36 LDAIKKKGFIQCGISDGLPGFSYADASGKFTGLDVDICRAAAAAVFGDATKVKYTPLTAK 95 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 ERF ALQS ++D+LSRNT WT R+ +G F + Y+DG GF+ HKK G+ S +L GA Sbjct: 96 ERFTALQSGEVDVLSRNTTWTSSRDGGMGFMFTGVNYYDGIGFLTHKKAGLKSAKELDGA 155 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 ++C+QAGT TEL +AD+FKA+ M+Y P+ F+R +E A + RCD D S LYAL++ Sbjct: 156 TVCIQAGTDTELNVADFFKANKMQYTPVTFDRSDESAKALDSGRCDTLASDQSQLYALRI 215 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 +P + ++LP++ISK PL P + +GD +W+ IV W+ +AM+ AEE+GI KN+++++ Sbjct: 216 KLGKPDDFIVLPEVISKEPLGPLVRRGDDDWFTIVKWSLFAMLNAEEMGINSKNVDEMTA 275 Query: 267 DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGY 326 PD+ LG + + G+ L L W Y II+ +GNY E FDRN+G S LKI RG Sbjct: 276 KPATPDMAHLLGAE--GDFGKDLKLDNKWAYNIIKQVGNYQESFDRNVGKDSPLKIARGQ 333 Query: 327 NALWSKGGLMYAPPIR 342 NALW++GG+ YAPP+R Sbjct: 334 NALWNQGGIQYAPPVR 349 >gi|74313796|ref|YP_312215.1| putative periplasmic binding transport protein [Shigella sonnei Ss046] gi|73857273|gb|AAZ89980.1| putative periplasmic binding transport protein [Shigella sonnei Ss046] Length = 305 Score = 340 bits (871), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 149/307 (48%), Positives = 215/307 (70%), Gaps = 2/307 (0%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 ++CGI+ GL GF+ A+G + G DVD CR +++A+F D +K++Y PL AKERF ALQS Sbjct: 1 MQCGISDGLPGFSYADADGKFSGIDVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSG 60 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 ++D+LSRNT WT R+ +G+AF +T +DG GF+ H K G+ S +L GA++C+QAGT Sbjct: 61 EVDLLSRNTTWTSSRDAGMGMAFTGVTDYDGIGFLTHDKAGLKSAKELDGATVCIQAGTD 120 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215 TEL +ADYFKA+NMKY P+ F+R +E A + RCD D S LYAL++ P+E + Sbjct: 121 TELNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPAEWI 180 Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 +LP++ISK PL P + +GD EW++IV WT +AM+ AEE+GI +N+++ + + PD+ Sbjct: 181 VLPEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAH 240 Query: 276 FLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGL 335 LG K + G+ L L W Y II+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ Sbjct: 241 LLG--KEGDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGI 298 Query: 336 MYAPPIR 342 YAPP+R Sbjct: 299 QYAPPVR 305 >gi|229588541|ref|YP_002870660.1| putative amino acid ABC transporter substrate-binding protein [Pseudomonas fluorescens SBW25] gi|229360407|emb|CAY47264.1| putative amino acid ABC transport system, substrate-binding protein [Pseudomonas fluorescens SBW25] Length = 343 Score = 340 bits (871), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 157/330 (47%), Positives = 222/330 (67%), Gaps = 3/330 (0%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 +L + F+ + L ++K+GF++CG++ GL GF+ A+G G D D CRA+++A+F Sbjct: 16 VLGVSGFAQAGATLDAVQKKGFVQCGVSDGLPGFSVPDASGKILGIDADVCRAVAAAVFG 75 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP-ITYFDGQGFIMH 132 D +K+++ LNAKERF ALQS ++DILSRNT T R+ +GL F ITY+DG GF+++ Sbjct: 76 DATKVKFSQLNAKERFTALQSGEVDILSRNTTMTSSRDAGMGLKFPGFITYYDGIGFLVN 135 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 K G+ S +L GA+IC+QAGTTTEL ++DYF+ +N+KY PI F+ +E + + RCD Sbjct: 136 NKLGVKSAKELDGATICIQAGTTTELNVSDYFRGNNLKYTPITFDTSDESAKSLESGRCD 195 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 T D S L+A + P ++V+LP+ ISK PL P + GD EW IV W YAM+ AE Sbjct: 196 VLTSDKSQLFAQRSKLAAPKDYVVLPETISKEPLGPVVRNGDDEWLAIVRWVGYAMLNAE 255 Query: 253 ELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDR 312 E GIT KN+ +K T NPDV R LG D G+ L + KDW +I++ +GNYGE+F+R Sbjct: 256 EAGITSKNVEAEAKSTKNPDVARLLGAD--GEYGKDLKVKKDWVVQIVKQVGNYGEVFER 313 Query: 313 NLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 NLG + L+I RG NALW+ GG+ YAPP+R Sbjct: 314 NLGKSTPLEIDRGLNALWNNGGIQYAPPVR 343 >gi|89901102|ref|YP_523573.1| extracellular solute-binding protein [Rhodoferax ferrireducens T118] gi|89345839|gb|ABD70042.1| extracellular solute-binding protein, family 3 [Rhodoferax ferrireducens T118] Length = 344 Score = 339 bits (870), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 162/339 (47%), Positives = 221/339 (65%), Gaps = 5/339 (1%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 +++ + F ++ + L IK RG + CG+NTGL GF + G W G DVD CR Sbjct: 9 LTAVVATVGAFMSAPAHAGKTLDGIKARGQVVCGVNTGLAGFGAADSAGKWTGLDVDVCR 68 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 A+++A D KI+Y+PLNA++RF ALQS ++D+LSRNT +TL R+ SLGL +TY+D Sbjct: 69 AIAAATLGDAEKIKYVPLNAQQRFTALQSGEVDVLSRNTTFTLTRDASLGLHDTAVTYYD 128 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 GQGF++ K I S QL G ++CVQ+GTTTE L DY KA+ + P+VFE++E + A Sbjct: 129 GQGFMVPVKSKIKSAKQLKGQTVCVQSGTTTEKNLTDYSKANGLNIKPVVFEKLEAAENA 188 Query: 186 YRAHRCDAYTGDISALYAL--KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 Y RC AYT D S L + K+ D P EH+ILP++ISK PL P + +GD EW+ IV W Sbjct: 189 YFTGRCIAYTTDASGLASTRNKVAKD-PKEHIILPELISKEPLGPMVRRGDDEWFAIVKW 247 Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHM 303 Y ++ AEE GITQ N+ + + +P VQR LG + S G+ LGL+KDW I+ Sbjct: 248 VIYGLLEAEEYGITQANLEGLKATSKDPVVQRILGTSEDS--GKLLGLSKDWMANAIKAT 305 Query: 304 GNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F+RN+G S L +PRG N W+KGGLMYA P+R Sbjct: 306 GNYGEIFERNVGPNSPLGLPRGVNNQWNKGGLMYAYPVR 344 >gi|320184061|gb|EFW58881.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Shigella flexneri CDC 796-83] Length = 349 Score = 339 bits (869), Expect = 4e-91, Method: Compositional matrix adjust. Identities = 154/327 (47%), Positives = 226/327 (69%), Gaps = 10/327 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF--------CRALSSAIFDDP 75 + L ++K+GF++CGI+ GL+GF+ A+G + G DVD CR++++A+F D Sbjct: 25 GATLDAVQKKGFVQCGISDGLLGFSYADADGKFSGIDVDVDVDVDVDVCRSVAAAVFGDD 84 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +G+AF +TY+DG GF+ H K Sbjct: 85 TKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKA 144 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R +E A + RCD Sbjct: 145 GLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLA 204 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D S LYAL++ P+E ++LP++ISK PL P + +GD EW++IV WT +AM+ AEE+G Sbjct: 205 SDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMG 264 Query: 256 ITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLG 315 I +N+++ + + PD+ LG K + G+ L L W Y II+ +GNY E+F+RN+G Sbjct: 265 INSQNVDEKAANPATPDMAHLLG--KEGDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVG 322 Query: 316 NQSELKIPRGYNALWSKGGLMYAPPIR 342 ++S LKI RG N LW+ GG+ YAPP+R Sbjct: 323 SESPLKIKRGQNNLWNNGGIQYAPPVR 349 >gi|262277476|ref|ZP_06055269.1| general L-amino acid-binding periplasmic protein AapJ [alpha proteobacterium HIMB114] gi|262224579|gb|EEY75038.1| general L-amino acid-binding periplasmic protein AapJ [alpha proteobacterium HIMB114] Length = 347 Score = 339 bits (869), Expect = 4e-91, Method: Compositional matrix adjust. Identities = 154/319 (48%), Positives = 220/319 (68%), Gaps = 4/319 (1%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L K +GF+KCG++ G+ GF+ A+G+W G DVD CRA+++A+ D SK++Y L+ Sbjct: 32 STLDTTKSQGFVKCGVSQGVPGFSNADASGNWTGIDVDVCRAVAAAVLGDASKVKYTGLS 91 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL- 143 AKERF ALQ+ +IDILSRNT WTL R+ S+GL F + ++DGQGF++ K G+ SV+ Sbjct: 92 AKERFTALQAGEIDILSRNTTWTLERDASIGLTFVGVNFYDGQGFMVRKSTGLKSVNDFK 151 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 +G +C GTTTEL +AD+FK+ +KY P+VFE+ +E+ AY A RCD YT D SAL A Sbjct: 152 NGVKVCTNLGTTTELNMADFFKSKGVKYEPVVFEKADEVVQAYDAGRCDTYTTDKSALAA 211 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 P+EHV+LP+ ISK PL P + QGD++W ++V W+ + AEE G+ NI+ Sbjct: 212 QSTKMKDPTEHVVLPETISKEPLGPVVRQGDSKWEDVVRWSLNVFIEAEEYGVNSGNIDS 271 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 + K++ NP +QR +G + + N GEALGL W+YRII+ +GNYGE + RNL + + + Sbjct: 272 M-KESKNPAIQRIVGAEGTKN-GEALGLDNQWSYRIIKQIGNYGESYKRNLAD-TNIMPE 328 Query: 324 RGYNALWSKGGLMYAPPIR 342 RG N LW+KGG++Y PP+R Sbjct: 329 RGPNQLWTKGGILYVPPVR 347 >gi|319793876|ref|YP_004155516.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] gi|315596339|gb|ADU37405.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] Length = 344 Score = 338 bits (867), Expect = 7e-91, Method: Compositional matrix adjust. Identities = 152/342 (44%), Positives = 227/342 (66%), Gaps = 3/342 (0%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 ++ ++ L+ + + L +K+RG +KCG+ G+ GF+ G+W G DV Sbjct: 5 FRPALIAAASLVAFATAAPAFAGKTLDAVKQRGTVKCGVTNGVAGFSAPDTQGNWSGLDV 64 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D CRA+++A+ D K+ ++PLN+++RF ALQ+ +IDIL+RNT WTL R+ SLG F I Sbjct: 65 DTCRAIAAAVLGDAKKVDFVPLNSQQRFSALQAGEIDILARNTTWTLTRDASLGFNFTTI 124 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 TY+DGQGF++ KK ++S QL A+IC Q+GTT E ++DYF+A N+ +VFE E Sbjct: 125 TYYDGQGFLVPKKLKVTSAKQLKNATICTQSGTTNEKNVSDYFRAQNIPVKTVVFESFEA 184 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A+ + RC A+T D SAL L+ P +++ILP++ISK PLAP + +GD EW+ I Sbjct: 185 SFKAFFSGRCQAFTTDASALAGLRNKEAPNPDDYIILPELISKEPLAPLVRRGDDEWFAI 244 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 W A++ AEE G+TQ N +++ + +P QR +G ++G+ LGL KDW++R I Sbjct: 245 AKWVPNALIEAEEAGVTQANADELKASSKDPAQQRLVGT--GEDLGKLLGLDKDWSFRAI 302 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F+RN+G +S LK+PRG N LWSKGGL+YAPP+R Sbjct: 303 KAVGNYGEVFERNVGPKSVLKLPRGSNNLWSKGGLIYAPPVR 344 >gi|83950493|ref|ZP_00959226.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Roseovarius nubinhibens ISM] gi|83838392|gb|EAP77688.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Roseovarius nubinhibens ISM] Length = 339 Score = 338 bits (867), Expect = 7e-91, Method: Compositional matrix adjust. Identities = 156/343 (45%), Positives = 220/343 (64%), Gaps = 5/343 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ L + + + A L D+K RG L CG+ TGLVGFA NG W GFD Sbjct: 1 MKKSVFLG--ALTVAGLAAGAAAAGTLDDVKARGKLNCGVTTGLVGFAAPDENGRWDGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ DP ++++P K RF AL S +ID+L+RNT WT R++ L F Sbjct: 59 VGVCRAVAAAVLGDPDAVEFVPTTGKTRFTALASGEIDVLARNTTWTFSRDVDLKFTFVG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y++GQGF++ K+ G+SS +L GA++C+Q GTTTEL LAD+F+A+N+ Y P+ E Sbjct: 119 VNYYNGQGFMVPKELGVSSAKELDGATVCIQTGTTTELNLADFFRANNISYEPVPIETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT D S L A + + + P++HV+LP+IISK PL P + GD EW ++ Sbjct: 179 EGQQQYLAGACDTYTTDASGLAATRASFENPADHVVLPEIISKEPLGPLVRHGDDEWGDV 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDT-TNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 V WT A++ AEELGIT NI ++S NP+V R LG + N+GE LGL DW + Sbjct: 239 VRWTLNALIAAEELGITSANIGELSAAAGDNPEVNRLLGTE--GNLGEMLGLDADWAVKA 296 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++ GNYGE+F++N+G S + + RG NA W+ GGL+Y+PP R Sbjct: 297 VQAGGNYGELFEKNIGENSPVGLARGLNAQWTDGGLLYSPPFR 339 >gi|254439839|ref|ZP_05053333.1| lysine-arginine-ornithine-binding periplasmic protein [Octadecabacter antarcticus 307] gi|198255285|gb|EDY79599.1| lysine-arginine-ornithine-binding periplasmic protein [Octadecabacter antarcticus 307] Length = 338 Score = 338 bits (866), Expect = 9e-91, Method: Compositional matrix adjust. Identities = 149/316 (47%), Positives = 208/316 (65%), Gaps = 2/316 (0%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L D+K RG L CG+ TGLVGFA ANG W+GFDV CRAL++A+ DP ++++P + Sbjct: 25 LDDVKARGTLNCGVTTGLVGFAAPDANGVWEGFDVGVCRALAAAVLGDPMAVEFVPTTGQ 84 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 RF AL S +ID L+RNT WT R++ L F I Y+DGQGF++ ++ G+SS L GA Sbjct: 85 TRFTALASGEIDFLARNTTWTFSRDVDLKFEFTGINYYDGQGFMVPRELGVSSAKDLDGA 144 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 ++C+Q GTTTEL LADYF+++N+ Y P+ E E Y A CD YT D S L A + Sbjct: 145 TVCIQTGTTTELNLADYFRSNNISYEPVPIETNAEGQQQYLAGACDTYTTDASGLAATRA 204 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 T + P +HV+LP+IISK PL P + GD EW ++ WT A++ AEELG+T NI +++ Sbjct: 205 TFENPGDHVLLPEIISKEPLGPLVRHGDNEWADVARWTLNALIAAEELGVTSANIAELAN 264 Query: 267 DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGY 326 T NP++ R LG + +G LGL DW I GNYGE+F++N+G + + + RG Sbjct: 265 GTDNPEINRLLGTE--GELGAMLGLEADWAKNAIMAGGNYGELFEKNIGENTPIGLARGL 322 Query: 327 NALWSKGGLMYAPPIR 342 NA+W++GGL+Y+PP R Sbjct: 323 NAMWTEGGLIYSPPFR 338 >gi|30064596|ref|NP_838767.1| putative periplasmic binding transport protein [Shigella flexneri 2a str. 2457T] gi|56480353|ref|NP_709270.2| putative periplasmic binding transport protein [Shigella flexneri 2a str. 301] gi|30042855|gb|AAP18578.1| putative periplasmic binding transport protein [Shigella flexneri 2a str. 2457T] gi|56383904|gb|AAN44977.2| putative periplasmic binding transport protein [Shigella flexneri 2a str. 301] gi|313648492|gb|EFS12934.1| general L-amino acid-binding periplasmic protein aapJ [Shigella flexneri 2a str. 2457T] Length = 305 Score = 338 bits (866), Expect = 9e-91, Method: Compositional matrix adjust. Identities = 148/307 (48%), Positives = 214/307 (69%), Gaps = 2/307 (0%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 ++CGI+ GL F+ A+G + G DVD CR +++A+F D +K++Y PL AKERF ALQS Sbjct: 1 MQCGISDGLPRFSYADADGKFSGIDVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSG 60 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 ++D+LSRNT WT R+ +G+AF +TY+DG GF+ H K G+ S +L GA++C+QAGT Sbjct: 61 EVDLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTD 120 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215 TEL +ADYFKA+NMKY P+ F+R +E A + RCD D S LYAL++ P+E + Sbjct: 121 TELNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPAEWI 180 Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 +LP++ISK PL P + +GD EW++IV WT +AM+ AEE+GI +N+++ + + PD+ Sbjct: 181 VLPEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAH 240 Query: 276 FLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGL 335 LG K + G+ L L W Y II+ + NY E+F+RN+G++S LKI RG N LW+ GG+ Sbjct: 241 LLG--KEGDYGKDLKLDNKWAYNIIKQVSNYSEIFERNVGSESPLKIKRGQNNLWNNGGI 298 Query: 336 MYAPPIR 342 YAPP+R Sbjct: 299 QYAPPVR 305 >gi|254451978|ref|ZP_05065415.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Octadecabacter antarcticus 238] gi|198266384|gb|EDY90654.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Octadecabacter antarcticus 238] Length = 338 Score = 338 bits (866), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 150/316 (47%), Positives = 205/316 (64%), Gaps = 2/316 (0%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L D+K RG L CG+ TGLVGFA ANG W+GFDV CRAL++A+ DP ++++P + Sbjct: 25 LDDVKARGTLNCGVTTGLVGFAAPDANGVWEGFDVGLCRALAAAVLGDPMAVEFVPTTGQ 84 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 RF AL S +ID L+RNT WT R++ L F I Y+DGQGF++ + G+SS L GA Sbjct: 85 TRFTALASGEIDFLARNTTWTFSRDVDLKFEFVGINYYDGQGFMVPRALGVSSAKDLDGA 144 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 ++C+Q GTTTEL LADYF+++N+ Y P+ E E Y A CD YT D S L A + Sbjct: 145 TVCIQTGTTTELNLADYFRSNNISYEPVPIETNAEGQQQYLAGACDTYTTDASGLAATRA 204 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 T + P +HV+LP+IISK PL P + GD EW ++ WT A++ AEELG+T NI +++ Sbjct: 205 TFENPGDHVLLPEIISKEPLGPLVRHGDNEWADVARWTLNALIAAEELGVTSANIAEMAS 264 Query: 267 DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGY 326 T NP++ R LG +G LGL DW + I GNYGE+F++N+G + + + RG Sbjct: 265 GTDNPEINRLLG--SEGELGAMLGLESDWAMKAIMAGGNYGELFEKNIGENTPIGLARGL 322 Query: 327 NALWSKGGLMYAPPIR 342 NALW+ GGL+Y PP R Sbjct: 323 NALWTDGGLVYTPPFR 338 >gi|299134008|ref|ZP_07027201.1| extracellular solute-binding protein family 3 [Afipia sp. 1NLS2] gi|298590755|gb|EFI50957.1| extracellular solute-binding protein family 3 [Afipia sp. 1NLS2] Length = 350 Score = 337 bits (865), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 159/311 (51%), Positives = 219/311 (70%), Gaps = 3/311 (0%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 KRG + CG+N GL GFA ANG+W GFDVD CRA+++A+FDD +K+ ++PL+ +RF Sbjct: 43 KRGAVNCGVNAGLPGFANKDANGNWSGFDVDICRAVAAAVFDDATKVNFIPLDTNQRFKE 102 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151 LQ++++DILSRN+ W++ RE+ L F ++Y+DG+GF++ + + + S +L G +CVQ Sbjct: 103 LQNRKVDILSRNSTWSMSREVDYDLTFAAVSYYDGEGFMVRRSRNVDSALELGGTRVCVQ 162 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 + TTT+L LADYFK +N+ Y + F V ++ AY A +CD T D S LYA + +P Sbjct: 163 SDTTTQLNLADYFKVNNITYDEMKFGNVSDMLKAYEAGKCDVLTTDTSQLYAYRQNLAKP 222 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 +HVIL DIISK PLAP + Q D +W IV W YAM+ AEELG+T KNI++ K + P Sbjct: 223 DDHVILADIISKEPLAPVVRQRDDQWMLIVKWAVYAMLNAEELGVTSKNIDEALK-SKKP 281 Query: 272 DVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWS 331 DV R +G + N GE LGLTKDW RIIRH+GNYGE+++RN+G S+L IPRG N LW+ Sbjct: 282 DVMRLVGTE--GNYGEELGLTKDWAARIIRHVGNYGEVYERNVGLGSKLGIPRGLNQLWN 339 Query: 332 KGGLMYAPPIR 342 GG+ YAPPIR Sbjct: 340 AGGIQYAPPIR 350 >gi|261752067|ref|ZP_05995776.1| cationic amino acid ABC transporter [Brucella suis bv. 5 str. 513] gi|261741820|gb|EEY29746.1| cationic amino acid ABC transporter [Brucella suis bv. 5 str. 513] Length = 277 Score = 337 bits (864), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 155/273 (56%), Positives = 206/273 (75%), Gaps = 3/273 (1%) Query: 72 FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131 F DP+K+++ PLNAKERF ALQS ++D+L RNT WT+ R+ SLGL F I Y+DGQGF++ Sbjct: 6 FGDPTKVKFTPLNAKERFTALQSGEVDVLIRNTTWTISRDTSLGLDFAGINYYDGQGFMI 65 Query: 132 HKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 + KK GI+S QLSGASICVQAGTTTEL +ADYF+A+ M+Y+P+VFE++EE +AAY + Sbjct: 66 NSKKLAGINSALQLSGASICVQAGTTTELNMADYFRANKMEYNPVVFEKIEEANAAYDSG 125 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 RCDAYT D S+LY ++L P +HVILP+IISK P + QGD W ++V WTH A++ Sbjct: 126 RCDAYTTDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDARWADVVRWTHNALL 185 Query: 250 TAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEM 309 AEE GITQ N+ ++ K + NPD++R LG + + IG LGL KDW +II+ +GNYGE+ Sbjct: 186 NAEEYGITQANVEEMKK-SDNPDIKRLLGAEADTKIGTDLGLDKDWVVKIIKGVGNYGEI 244 Query: 310 FDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 F+RN+G+ S LKI RG NA W+KGGL Y P+R Sbjct: 245 FERNIGSGSPLKIARGLNAQWNKGGLQYGIPVR 277 >gi|332098837|gb|EGJ03794.1| general L-amino acid-binding periplasmic protein aapJ [Shigella boydii 3594-74] Length = 357 Score = 336 bits (861), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 154/335 (45%), Positives = 226/335 (67%), Gaps = 18/335 (5%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF----------------CRAL 67 + L ++K+GF++CGI+ GL+GF+ A+G + G DVD CR++ Sbjct: 25 GATLDAVQKKGFVQCGISDGLLGFSYADADGKFSGIDVDVDVDVDVDVDVDVDVDVCRSV 84 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 ++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +G+AF +TY+DG Sbjct: 85 AAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFTGVTYYDGI 144 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R +E A Sbjct: 145 GFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRSDESAKALE 204 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 + RCD D S LYAL++ P+E ++LP++ISK PL P + +GD EW++IV WT +A Sbjct: 205 SGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFSIVRWTLFA 264 Query: 248 MVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYG 307 M+ AEE+GI +N+++ + + PD+ LG K + G+ L L W Y II+ +GNY Sbjct: 265 MLNAEEMGINSQNVDEKAANPATPDMAHLLG--KEGDYGKDLKLDNKWAYNIIKQVGNYS 322 Query: 308 EMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 323 EIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 357 >gi|160899043|ref|YP_001564625.1| extracellular solute-binding protein [Delftia acidovorans SPH-1] gi|160364627|gb|ABX36240.1| extracellular solute-binding protein family 3 [Delftia acidovorans SPH-1] Length = 345 Score = 336 bits (861), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 156/318 (49%), Positives = 224/318 (70%), Gaps = 7/318 (2%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L IK+RG + CG++TG GFA +G+W G DVD CRA+++A D SK++++P + + Sbjct: 31 LDGIKQRGAVACGVHTGRAGFALADGSGNWSGLDVDLCRAVAAATLGDASKVKFIPTSGQ 90 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 R ALQS +ID+L+RNT WT R+ LGL + I + DGQGF+ KK G++SV QLSGA Sbjct: 91 TRITALQSGEIDLLARNTTWTFTRDNGLGLMWAGINFHDGQGFMARKKPGLNSVKQLSGA 150 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK- 205 +ICV +G+TTE TL++YF+AH + Y +VF+ E A+ + RC AYTGD+ AL L+ Sbjct: 151 TICVISGSTTEKTLSEYFRAHKLNYKAVVFDNPEAALQAFSSGRCQAYTGDLGALAVLRG 210 Query: 206 --LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 L N P ++VILP++ISK P PA+ +GD EW+ +V WT AM+ AEELGITQ N ++ Sbjct: 211 KELAN--PDDYVILPEVISKEPAGPAVRRGDDEWFAVVRWTLNAMIEAEELGITQANADE 268 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 + + + V+RFLG +S ++G+ LGL K+W RI++ +GNYGE ++RNLG +S L +P Sbjct: 269 LKTRSDSIQVKRFLG--QSDDLGKQLGLDKEWALRIVKAVGNYGESYERNLGAKSGLNVP 326 Query: 324 RGYNALWSKGGLMYAPPI 341 RG NAL++KGGLM +PP+ Sbjct: 327 RGKNALFTKGGLMMSPPM 344 >gi|187479528|ref|YP_787553.1| L-amino acid ABC transporter substrate-binding protein [Bordetella avium 197N] gi|115424115|emb|CAJ50668.1| L-amino acid ABC transporter, substrate-binding protein [Bordetella avium 197N] Length = 338 Score = 335 bits (860), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 148/314 (47%), Positives = 224/314 (71%), Gaps = 3/314 (0%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 ++KK+GF++CG++TG+ GF+ + G+WKG DVD CRA+++A+F D SK + PLN ++R Sbjct: 28 NVKKKGFVQCGVSTGIPGFSIADSKGEWKGLDVDLCRAVAAAMFGDASKFKVTPLNTQQR 87 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 F ALQS ++D+L+RNT TL R+ +LGLA + Y+D QG ++ K G+ S +L GA++ Sbjct: 88 FTALQSGEVDVLTRNTTLTLSRDTTLGLADVAVNYYDSQGVMVSKDLGVKSAKELGGATV 147 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 CVQ GTTTEL LAD+F+++N+++ P+V ++ +EI A+ A RCDA+T D S L + + T Sbjct: 148 CVQPGTTTELNLADWFRSNNIEFKPVVIDKYDEIVRAFSAGRCDAFTTDKSQLASTRTTL 207 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 ++P +VILP+ SK PL P + QGD +W+N++ WT AM+ AEE GIT KN+ +++K + Sbjct: 208 EKPDNYVILPEDFSKEPLGPMVRQGDEQWFNMIRWTLTAMIEAEEYGITSKNVEEMTK-S 266 Query: 269 TNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNA 328 NP++QR LG+ + +G+ LG+ W Y I++ +GNYGE F+ NLG S +K+ RG NA Sbjct: 267 GNPNIQRILGV--TPGMGKNLGVDDKWAYNIVKQVGNYGESFEANLGKNSPMKLERGMNA 324 Query: 329 LWSKGGLMYAPPIR 342 + GGLMY PIR Sbjct: 325 SYKHGGLMYGWPIR 338 >gi|260757721|ref|ZP_05870069.1| cationic amino acid ABC transporter [Brucella abortus bv. 4 str. 292] gi|260761546|ref|ZP_05873889.1| cationic amino acid ABC transporter [Brucella abortus bv. 2 str. 86/8/59] gi|260668039|gb|EEX54979.1| cationic amino acid ABC transporter [Brucella abortus bv. 4 str. 292] gi|260671978|gb|EEX58799.1| cationic amino acid ABC transporter [Brucella abortus bv. 2 str. 86/8/59] Length = 277 Score = 335 bits (860), Expect = 5e-90, Method: Compositional matrix adjust. Identities = 154/273 (56%), Positives = 205/273 (75%), Gaps = 3/273 (1%) Query: 72 FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131 F DP+K+++ PLNAKERF A QS ++D+L RNT WT+ R+ SLGL F I Y+DGQGF++ Sbjct: 6 FGDPTKVKFTPLNAKERFTAFQSGEVDVLIRNTTWTISRDTSLGLDFAGINYYDGQGFMI 65 Query: 132 HKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 + KK GI+S QLSGASICVQAGTTTEL +ADYF+A+ M+Y+P+VFE++EE +AAY + Sbjct: 66 NSKKLAGINSALQLSGASICVQAGTTTELNMADYFRANKMEYNPVVFEKIEEANAAYDSG 125 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 RCDAYT D S+LY ++L P +HVILP+IISK P + QGD W ++V WTH A++ Sbjct: 126 RCDAYTTDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDARWADVVRWTHNALL 185 Query: 250 TAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEM 309 AEE GITQ N+ ++ K + NPD++R LG + + IG LGL KDW +II+ +GNYGE+ Sbjct: 186 NAEEYGITQANVEEMKK-SDNPDIKRLLGAEADTKIGTDLGLDKDWVVKIIKGVGNYGEI 244 Query: 310 FDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 F+RN+G+ S LKI RG NA W+KGGL Y P+R Sbjct: 245 FERNIGSGSPLKIARGLNAQWNKGGLQYGIPVR 277 >gi|294084021|ref|YP_003550778.1| glutamate/glutamine/aspartate/asparagine ABC transporter periplasmic substrate-binding protein [Candidatus Puniceispirillum marinum IMCC1322] gi|292663593|gb|ADE38694.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 338 Score = 335 bits (859), Expect = 6e-90, Method: Compositional matrix adjust. Identities = 156/322 (48%), Positives = 210/322 (65%), Gaps = 2/322 (0%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + AS L D+K RG +KC +TGL GFA G+W GFDVDFCRA ++A+ D KI Sbjct: 19 TAQASTLEDVKSRGEVKCVFSTGLAGFAFPDDKGNWTGFDVDFCRATAAAVLGDAQKIGP 78 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +P + RF L + + D+L RNT T R++ + L F + Y+DGQGF+ K GISS Sbjct: 79 VPATTQNRFTVLNAGEADVLWRNTTITFSRDVGVKLTFLGVNYYDGQGFMAKKSLGISSA 138 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 +L GAS+C+Q GTTTEL LADYF+++NM Y + E Y + R D T D SA Sbjct: 139 LELDGASVCIQTGTTTELNLADYFRSNNMTYEAVPVADSAEARECYNSGRGDVLTTDASA 198 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L + + + P +H++LP+IISK PL PA+ QGD EW +IV W YA +TAEELGITQ N Sbjct: 199 LSSQRAAMENPDDHMVLPEIISKEPLGPAVRQGDDEWADIVRWVLYATITAEELGITQAN 258 Query: 261 INQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSEL 320 +N + T NP+++RFLG++ +N+G LGL+ DW II +GNYGE+F+RN+G + L Sbjct: 259 VNTIGATTNNPEIKRFLGLE--ANLGPELGLSNDWAKNIIAQVGNYGEIFERNIGVNTPL 316 Query: 321 KIPRGYNALWSKGGLMYAPPIR 342 I RG NALW+ GGL Y+PP R Sbjct: 317 GIGRGVNALWTDGGLQYSPPFR 338 >gi|75906963|ref|YP_321259.1| extracellular solute-binding protein [Anabaena variabilis ATCC 29413] gi|75700688|gb|ABA20364.1| L-glutamate-binding protein / L-aspartate-binding protein / neutral amino acid-binding protein [Anabaena variabilis ATCC 29413] Length = 356 Score = 335 bits (859), Expect = 6e-90, Method: Compositional matrix adjust. Identities = 152/313 (48%), Positives = 218/313 (69%), Gaps = 3/313 (0%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 IK RG L CG++ + GF+ V NG++ G DVD CRA+++A+FD+P +++ L+AKERF Sbjct: 47 IKNRGQLICGVSGEVPGFSFVGTNGEYSGIDVDVCRAIAAALFDNPDAVEFRNLSAKERF 106 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 ALQ+ ++DILSRNT WTL R S+GL F P+ ++DGQ ++ K I S++ L +IC Sbjct: 107 TALQTGEVDILSRNTTWTLSRATSVGLEFAPVVFYDGQAIMVRKNSAIKSLADLKDKAIC 166 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 VQ GTTTE LAD + N+ Y P+VFE V A Y RCDA T D SAL + + T Sbjct: 167 VQTGTTTEQNLADQMRKRNITYKPVVFEDVNVTFATYAEGRCDAITADRSALVSRRTTLP 226 Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 +P ++V+L ++IS PLAPA+ +GD +W + V+W YA++ EELGI +N+ Q + + Sbjct: 227 KPEDNVVLDEVISSEPLAPAVAKGDAKWSDTVNWVVYALIKGEELGINSQNLGQFTT-SN 285 Query: 270 NPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNAL 329 +PDV+RFLG + ++G+ LGLT D+ RII+H+GNYGE++DRNLG +++L + RG N L Sbjct: 286 DPDVKRFLGTE--GDLGQGLGLTNDFAARIIKHVGNYGELYDRNLGPKTKLNLARGQNQL 343 Query: 330 WSKGGLMYAPPIR 342 WSKGGL+Y+PP R Sbjct: 344 WSKGGLLYSPPFR 356 >gi|77457200|ref|YP_346705.1| extracellular solute-binding protein [Pseudomonas fluorescens Pf0-1] gi|77381203|gb|ABA72716.1| amino acid ABC transporter substrate-binding protein, PAAT family [Pseudomonas fluorescens Pf0-1] Length = 343 Score = 335 bits (859), Expect = 6e-90, Method: Compositional matrix adjust. Identities = 156/343 (45%), Positives = 222/343 (64%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + +L + F+ + L +KK+GF++CG++ GL GF+ + G G D Sbjct: 3 MLKSTLAIVTAAAVLGVSGFAQAGATLDAVKKKGFVQCGVSDGLPGFSVPDSTGKIVGID 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D CRA+++A+F D +K+++ LNAKERF ALQS +IDILSRNT T R+ +GL F Sbjct: 63 ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTMTSSRDAGMGLKFPG 122 Query: 121 -ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 ITY+DG GF+++ K G+ S +L GA+IC+QAGTTTEL ++DYF+ + +KY PI F+ Sbjct: 123 FITYYDGIGFLVNNKLGVKSAKELDGATICIQAGTTTELNVSDYFRGNGLKYTPITFDTS 182 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E + + RCD T D S L+A + P ++V+LP+ ISK PL P + GD EW Sbjct: 183 DESAKSLESGRCDVLTSDKSQLFAQRSKLASPKDYVVLPETISKEPLGPVVRNGDDEWLA 242 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV W YA++ EE GI+ KN+ +K T NPDV R LG D G+ L L KDW +I Sbjct: 243 IVRWVGYALLNTEEAGISSKNVEAEAKSTKNPDVARMLGAD--GEYGKDLKLPKDWVVQI 300 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++ +GNYGE+F++NLG + L+I RG NALW+ GG+ YAPP+R Sbjct: 301 VKQVGNYGEIFEKNLGKSTPLEIDRGLNALWNNGGIQYAPPVR 343 >gi|84515667|ref|ZP_01003028.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Loktanella vestfoldensis SKA53] gi|84510109|gb|EAQ06565.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Loktanella vestfoldensis SKA53] Length = 339 Score = 335 bits (858), Expect = 7e-90, Method: Compositional matrix adjust. Identities = 152/343 (44%), Positives = 220/343 (64%), Gaps = 5/343 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ L + L T+ +A+ L D+K RG LKCG N GL GFA ANG+W+GFD Sbjct: 1 MTKTVFIGALAVAGL--TAGIASAATLDDVKARGSLKCGSNEGLAGFAAPDANGNWEGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ D ++++PL ++ RF AL + ++D+L RN+ WT R+ L L F Sbjct: 59 VSLCRAIAAAVLGDGQAVEFVPLTSQTRFTALAAGEVDVLVRNSTWTFTRDTDLALDFPA 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 I Y+DGQGF++ + G+SS ++L GA++C+Q GTTTEL LADYF+A+ + Y P+ Sbjct: 119 INYYDGQGFMVPRALGVSSAAELDGATVCIQTGTTTELNLADYFRANGISYEPVPVATNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT DIS L A + T + P +HVILP+++SK PL PA+ GD W +I Sbjct: 179 EGQQQYLAGACDVYTTDISGLAATRATFEAPGDHVILPEVVSKEPLGPAVRHGDNAWGDI 238 Query: 241 VSWTHYAMVTAEELGITQKNINQV-SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 V WT +A+V AEE G+T+ N+ ++ + T NP+V R LG + +G +GL DW ++ Sbjct: 239 VRWTTHALVAAEEYGVTKANVAELAAAPTDNPEVNRLLGTE--GELGAMIGLDADWAVKV 296 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + GNYGE+F+ N+G + + + RG NA W+ GGLMY P R Sbjct: 297 LSVAGNYGEIFEANIGESTAVGLARGLNAQWTDGGLMYGGPFR 339 >gi|237807991|ref|YP_002892431.1| extracellular solute-binding protein family 3 [Tolumonas auensis DSM 9187] gi|237500252|gb|ACQ92845.1| extracellular solute-binding protein family 3 [Tolumonas auensis DSM 9187] Length = 342 Score = 334 bits (856), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 159/340 (46%), Positives = 232/340 (68%), Gaps = 5/340 (1%) Query: 5 FFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + + + L + AS L ++KK+G+++CG+N GL GF+ A G W+G DVD Sbjct: 6 YLTGVASAVALLVAGNAQAASGDTLANVKKKGYVQCGVNDGLPGFSSPNAKGAWEGMDVD 65 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 CRA+++A+F D SK++Y+PL KERF ALQS ++DILSRNT WT+ R+ +LGL T Sbjct: 66 VCRAVAAAVFADASKVKYIPLGGKERFTALQSGEVDILSRNTTWTMTRDATLGLKSTATT 125 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y+DGQGF+++K G+ S +L GA+IC + GTTTE+ +ADYF A+ MKY P+VF+ ++ Sbjct: 126 YYDGQGFMVNKSLGVKSAKELDGATICTEGGTTTEMNMADYFNANKMKYTPVVFDNSDQT 185 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + + RCD T D S L+A+++ +P + +LP+IISK PL P + QGD W +V Sbjct: 186 VKGFESGRCDVLTSDKSQLFAVRVKLAKPDDVAVLPEIISKEPLGPMVRQGDESWELLVK 245 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302 WT +AM+ AEELG++ KN+++++K + +PDV+R LG D G LG KDW Y+I++ Sbjct: 246 WTVFAMINAEELGVSSKNVDEMAK-SGSPDVKRMLGYDAPD--GTTLGAVKDWGYQIVKQ 302 Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNY E+FDRN+G S LKI R N LW+KGG +YAPP+R Sbjct: 303 VGNYAEVFDRNVGKDSPLKIVRTENNLWNKGGFLYAPPVR 342 >gi|126736638|ref|ZP_01752378.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Roseobacter sp. CCS2] gi|126713951|gb|EBA10822.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Roseobacter sp. CCS2] Length = 339 Score = 333 bits (855), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 149/333 (44%), Positives = 214/333 (64%), Gaps = 3/333 (0%) Query: 11 CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70 L + F + +A+ L D+K+RG L CG+ TGLVGFA ANG W GFDV CRA+++A Sbjct: 9 ALTVAGFAASMASAATLDDVKERGVLNCGVTTGLVGFASPDANGVWDGFDVGVCRAVAAA 68 Query: 71 IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130 + D ++++P K RF AL S +ID+L+RNT WT R++ L F I Y+DGQGF+ Sbjct: 69 VLGDSDAVEFVPTTGKTRFTALASGEIDMLARNTTWTFSRDVDLKFEFVGINYYDGQGFL 128 Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190 + + G+SS +L GA++C+Q GTTTEL LADYF+++N+ Y P+ E E Y A Sbjct: 129 VPRDLGVSSAKELDGATVCIQTGTTTELNLADYFRSNNISYEPVPIETNAEGQQQYLAGA 188 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 CD YT D S L A + + P++HV+LP+I+SK PL P + GD +W ++V W+ A++ Sbjct: 189 CDVYTTDASGLAATRAAFENPADHVVLPEIVSKEPLGPLVRHGDNDWADVVRWSLNALIA 248 Query: 251 AEELGITQKNINQV-SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEM 309 AEELG+T NI ++ + T NP+V R LG + +G LGL DW I GNYGE+ Sbjct: 249 AEELGVTSANIEELAAAPTGNPEVNRLLGTE--GELGAMLGLEADWAKNAIAAGGNYGEL 306 Query: 310 FDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 F++N+G + + + RG NA W+ GGL+Y+PP R Sbjct: 307 FEKNIGENTPIGLARGLNAQWTDGGLLYSPPFR 339 >gi|254486168|ref|ZP_05099373.1| glutamate/glutamine/aspartate/asparagine-binding protein [Roseobacter sp. GAI101] gi|214043037|gb|EEB83675.1| glutamate/glutamine/aspartate/asparagine-binding protein [Roseobacter sp. GAI101] Length = 338 Score = 333 bits (855), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 157/342 (45%), Positives = 224/342 (65%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + + L + ++ A+ L D+K+RG L CG+ TGLVGFA ANG+W+GFD Sbjct: 1 MNKSVFFGAMTVAGL--VAGASAAATLDDVKERGKLNCGVTTGLVGFAAPNANGEWEGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+F DP+ ++++P K RF AL S +ID L+RNT WT R++ L F Sbjct: 59 VAVCRAVAAAVFGDPTAVEFIPTTGKTRFTALASGEIDFLARNTTWTFSRDVDLKFDFIG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K G+SS L GA++C+Q GTTTEL LAD+F+A+N+ Y P+ E Sbjct: 119 VNYYDGQGFMVPKALGVSSAKDLDGATVCIQTGTTTELNLADFFRANNISYEPVPIETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT D S L + + T + P +H+ILP+IISK PL P + GD +W ++ Sbjct: 179 EGQQQYLAGACDTYTTDASGLASTRATFETPGDHIILPEIISKEPLGPLVRHGDNDWGDL 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 W YA++ AEELG+T N+ +++ TTNP+V R LG + + +GE LGL+ DW I Sbjct: 239 TRWVLYALIAAEELGVTSANVEEMATSTTNPEVARLLGAEGT--LGEMLGLSADWAKNAI 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F +N+G ++ + + RG NA W+ GGLMYAPP R Sbjct: 297 ASQGNYGEIFAKNIGEETPIGLARGLNAQWTDGGLMYAPPFR 338 >gi|282897630|ref|ZP_06305630.1| extracellular solute-binding protein, family 3 [Raphidiopsis brookii D9] gi|281197553|gb|EFA72449.1| extracellular solute-binding protein, family 3 [Raphidiopsis brookii D9] Length = 351 Score = 333 bits (855), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 149/307 (48%), Positives = 221/307 (71%), Gaps = 3/307 (0%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 L CG++ L GF+ V+ +G + G DVD CRA+++A+FD+P K+++ L+AKERF ALQ+ Sbjct: 48 LVCGVSGELPGFSFVQTDGKYAGIDVDVCRAVAAALFDNPDKVEFRNLSAKERFTALQTG 107 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 +ID+LSRNT WT R+ S+GL F P+ +DGQG ++ K GI+S++ L +IC Q GTT Sbjct: 108 EIDLLSRNTTWTFSRDTSMGLYFSPVVLYDGQGIMIRKNSGINSLADLKNKAICTQTGTT 167 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215 TE LAD + + Y P+VFE + A Y RCDA T D SAL + + T +P +++ Sbjct: 168 TEQNLADQMRKRGISYKPVVFEDINVTFATYSEGRCDAVTADRSALISRRTTLPKPEDNI 227 Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 IL +++S PLAPA+ QGD +W NIV W+ YA++ AEELGI +NI+Q + ++ +P+++R Sbjct: 228 ILNELLSSEPLAPAVAQGDPQWNNIVKWSVYALIKAEELGINSQNISQFA-NSKDPEIKR 286 Query: 276 FLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGL 335 FLG + N+G+ +GLT D+ RII+H+GNYGE++DRNLG++++L +PRG N L+SKGGL Sbjct: 287 FLGTE--GNLGKGIGLTNDFAARIIKHVGNYGEIYDRNLGSKTKLNLPRGQNELYSKGGL 344 Query: 336 MYAPPIR 342 +Y+PP R Sbjct: 345 LYSPPFR 351 >gi|113475659|ref|YP_721720.1| extracellular solute-binding protein [Trichodesmium erythraeum IMS101] gi|110166707|gb|ABG51247.1| extracellular solute-binding protein, family 3 [Trichodesmium erythraeum IMS101] Length = 343 Score = 333 bits (854), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 143/313 (45%), Positives = 217/313 (69%), Gaps = 2/313 (0%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 +K RG L CG+ G+ GF+ V NG++ G DVD C+A+++A+F+DP+ ++Y L++ ERF Sbjct: 33 VKNRGKLICGVEGGIPGFSFVDKNGNYSGIDVDICKAVAAALFNDPNLVEYRNLDSTERF 92 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 AL ++D+LSRNT WT+ R+ ++GL F P T++DGQG ++ G+ S+ L G SIC Sbjct: 93 TALNGGEVDMLSRNTTWTVSRDTTVGLEFAPTTFYDGQGMMVRANSGVESLEDLQGKSIC 152 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V+AGTTTEL L D + N+ + F++ + AAY RCD T D S L + + T Sbjct: 153 VEAGTTTELNLTDNLRQRNVTAETLTFQQADPAYAAYAEGRCDGMTSDKSQLLSRRSTLP 212 Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 P++HVIL +SK PL P D+ W+++V W YA++ AEELGITQ+N++ + +++ Sbjct: 213 SPNDHVILQVTMSKEPLGPVTKNNDSAWFDVVKWVTYALIEAEELGITQENVDDLKQNSD 272 Query: 270 NPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNAL 329 NP ++RFLG+D ++GE LGL+ D+ YR+I+++GNY E++DRNLG +S+ K+PRG N L Sbjct: 273 NPTIRRFLGVD--GDLGEGLGLSNDFAYRVIKNVGNYAEVYDRNLGEESQFKLPRGMNNL 330 Query: 330 WSKGGLMYAPPIR 342 W+KGGL+Y+PP R Sbjct: 331 WTKGGLLYSPPFR 343 >gi|84685382|ref|ZP_01013280.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Maritimibacter alkaliphilus HTCC2654] gi|84666539|gb|EAQ13011.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Rhodobacterales bacterium HTCC2654] Length = 338 Score = 333 bits (854), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 160/342 (46%), Positives = 219/342 (64%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ L + F + S +A+ L D++ RG LKCG N+GL GFA ANG W+GFD Sbjct: 1 MKKSVFLG--ALTVAGFVAGSASAATLDDVQARGSLKCGSNSGLTGFAAPDANGHWEGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ DP ++++P K RF AL S ++DIL RNT WTL R++ L F Sbjct: 59 VAVCRAVAAAVLGDPEAVEFVPTTPKTRFTALASGEVDILVRNTTWTLTRDVDLKFTFTG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGFI+ K G+SS +L GA++C+Q GTTTEL LAD+F+ +N+ Y P+ E Sbjct: 119 VNYYDGQGFIVPKALGVSSAKELDGATVCIQTGTTTELNLADFFRTNNISYEPVPIETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT D S L A + + + P++H ILP+IISK PL P + GD EW +I Sbjct: 179 EAQQQYLAGACDTYTTDASGLAATRASFENPADHAILPEIISKEPLGPLVRHGDDEWADI 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT A+V AEE GIT NI +++ T NP++ R LG + + +GE LGL DW + I Sbjct: 239 VRWTLNALVAAEEFGITSTNIEELASGTDNPEINRILGTEGT--MGEMLGLEADWAMKAI 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F++N+G + + + RG NA W GGL YAPP R Sbjct: 297 AAGGNYGEIFEKNIGESTPIGLARGLNAQWKDGGLQYAPPFR 338 >gi|309791172|ref|ZP_07685704.1| extracellular solute-binding protein family 3 [Oscillochloris trichoides DG6] gi|308226734|gb|EFO80430.1| extracellular solute-binding protein family 3 [Oscillochloris trichoides DG6] Length = 380 Score = 333 bits (853), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 147/313 (46%), Positives = 219/313 (69%), Gaps = 3/313 (0%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 I RG L CG+N+ L GF V + G++ GFDV+FCRA+++A+FDDP+K+++ PLNA+ERF Sbjct: 71 IISRGNLICGVNSVLPGFGNVDSTGNFSGFDVEFCRAIAAALFDDPTKVEFRPLNAQERF 130 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 ALQS ++D+LSRNT TL R+ S+GL F P+T++DGQG ++ K GI S+ + GA IC Sbjct: 131 TALQSGEVDVLSRNTTATLTRDGSVGLDFAPVTFYDGQGMMVRKDSGIESLEDMEGARIC 190 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 VQ+GTTTEL LAD F++ N+ + ++F+ + AY + +CD +T D S L + + Sbjct: 191 VQSGTTTELNLADQFRSRNINFEAVIFQEADPTFQAYDSGQCDGFTTDKSGLVSYQTKAT 250 Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 P +H+IL +SK PLAPA++QGD +W + V W YA + AEELGIT NI + T Sbjct: 251 NPDDHMILDVTMSKEPLAPAVLQGDAQWADAVRWVVYATIEAEELGITSANIGDFAA-TE 309 Query: 270 NPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNAL 329 +P+++RFLG++ +G +GL D+ R+I+H+GNY E+++RNLG + +PRG N L Sbjct: 310 DPNIRRFLGVE--GELGAGIGLPNDFAARVIKHVGNYQEIYNRNLGPDTPFNLPRGLNTL 367 Query: 330 WSKGGLMYAPPIR 342 +++GGL+Y+PP R Sbjct: 368 YTEGGLLYSPPFR 380 >gi|303256337|ref|ZP_07342353.1| general amino acid ABC transporter, periplasmic binding protein [Burkholderiales bacterium 1_1_47] gi|302861066|gb|EFL84141.1| general amino acid ABC transporter, periplasmic binding protein [Burkholderiales bacterium 1_1_47] Length = 340 Score = 333 bits (853), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 149/342 (43%), Positives = 227/342 (66%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + L + L + + +L +K + CG+NT GF+ + G+W G D Sbjct: 1 MNQTILAGALSAVSLSLAAPAFAGPVLDKVKANDVVVCGVNTAAPGFSNADSKGNWTGLD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+CRAL++A+ D +K++++PLN+ +RF ALQ+ ++D+L+RNT W L R+ SLG F Sbjct: 61 VDYCRALAAAVLADANKVKFVPLNSPQRFSALQAGEVDVLARNTTWNLTRDASLGAVFVG 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+DGQGF++ KK + S QL+GA+ICVQ+GT++E ++ADYFK+H MKY ++F+ E Sbjct: 121 TNYYDGQGFLVPKKLNVKSAKQLNGATICVQSGTSSEPSVADYFKSHGMKYKAVLFDTTE 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A+ + RC YT D+S L + P ++VILP++ISK PL P++ +GD EW+ I Sbjct: 181 ATQGAFLSGRCQVYTTDMSDLAGARTKAANPDDYVILPEVISKEPLGPSVRRGDNEWFQI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 W A + AEE GITQ N +++ K +T+P+V+R LG ++G+ LGL KDW+YRI+ Sbjct: 241 ARWVLNAFIEAEEKGITQANADELRKTSTDPNVKRLLG--SGEDMGKLLGLDKDWSYRIV 298 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE F+RNLG ++ L +PRG N W+ GG++YAPP+R Sbjct: 299 KQVGNYGESFERNLGPKTPLALPRGINNQWTNGGILYAPPVR 340 >gi|149203333|ref|ZP_01880303.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Roseovarius sp. TM1035] gi|149143166|gb|EDM31205.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Roseovarius sp. TM1035] Length = 339 Score = 332 bits (852), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 151/317 (47%), Positives = 209/317 (65%), Gaps = 3/317 (0%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L D+K RG L CG+ TGLVGFA ANG W+GFDV CRA+++A+ D + ++++P K Sbjct: 25 LDDVKARGKLNCGVTTGLVGFAAPDANGVWEGFDVAICRAVAAAVLGDGNAVEFVPTTGK 84 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 RF AL S +ID+L+RNT WT R+ L F + Y+DGQGF++ K G+SS +L GA Sbjct: 85 TRFTALASGEIDLLARNTTWTFSRDTDLKFDFVGVNYYDGQGFLVPKSLGVSSAKELDGA 144 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 ++C+Q GTTTEL LAD+F+A+N+ Y P+ E E Y A CD YT D S L + + Sbjct: 145 TVCIQTGTTTELNLADFFRANNISYEPVPIETNAEGQQQYLAGACDTYTTDASGLASTRA 204 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 + P +HVILP+IISK PL P + GD +W +IV WT YA+V AEE+GIT NI ++S Sbjct: 205 AFENPGDHVILPEIISKEPLGPLVRHGDNDWGDIVRWTFYALVAAEEMGITSANIGELSA 264 Query: 267 DT-TNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRG 325 NP++ R LG + +G +GL DW R I GNYGE+F++N+G ++ + + RG Sbjct: 265 AAGANPEINRILGTE--GELGAMIGLDNDWAKRAISVGGNYGEIFEKNIGEKTPIGLARG 322 Query: 326 YNALWSKGGLMYAPPIR 342 NA W++GG+MYAPP R Sbjct: 323 LNAQWTQGGIMYAPPFR 339 >gi|296537351|ref|ZP_06899216.1| ABC superfamily ATP binding cassette transporter, amino acid binding protein [Roseomonas cervicalis ATCC 49957] gi|296262324|gb|EFH09084.1| ABC superfamily ATP binding cassette transporter, amino acid binding protein [Roseomonas cervicalis ATCC 49957] Length = 344 Score = 332 bits (852), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 152/316 (48%), Positives = 220/316 (69%), Gaps = 6/316 (1%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 +G I+ RG L CG+ GF+ + G +G D D CRA+++AIF D SK++++ ++ Sbjct: 35 VGAIRARGALICGVTGTTAGFSLPDSQGVMRGIDADTCRAVAAAIFGDASKVRFVNTTSQ 94 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 RF ALQS ++D+L+RNT WTL RE SLG F I ++DGQGF++ ++S L GA Sbjct: 95 NRFTALQSGEVDMLARNTTWTLSREASLGFEFASINFYDGQGFMVKTSLNVTSAKALDGA 154 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 +ICVQ GTTTEL LADYF+ + M++ P+V E VEEI A+ + RCDAYT D S+L A + Sbjct: 155 TICVQPGTTTELNLADYFRTNRMRFTPVVIESVEEIRTAFNSGRCDAYTNDASSLAAFRA 214 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 T P+E+++LP+IISK PL + +GD ++++IV W H+A VTAEELGIT +N+ + Sbjct: 215 TQANPAEYLLLPEIISKEPLGAVVRKGDWKFFDIVRWAHFAQVTAEELGITSQNLASFA- 273 Query: 267 DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGY 326 D+ NPDVQRF+G KS ++G LG+ DW +I+R +GN+GE+++RN+ + L + RG Sbjct: 274 DSPNPDVQRFMG--KSGDLGRMLGVQADWAVQIVRQVGNFGEVWERNI---TPLGVQRGI 328 Query: 327 NALWSKGGLMYAPPIR 342 N LW++GGL YAPP+R Sbjct: 329 NRLWTQGGLQYAPPMR 344 >gi|319779135|ref|YP_004130048.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Taylorella equigenitalis MCE9] gi|317109159|gb|ADU91905.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Taylorella equigenitalis MCE9] Length = 336 Score = 332 bits (851), Expect = 5e-89, Method: Compositional matrix adjust. Identities = 152/336 (45%), Positives = 229/336 (68%), Gaps = 6/336 (1%) Query: 10 LCLII--LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 L L+I L S A L +K RG + CG TG GF+ G+W+G DVD C+++ Sbjct: 4 LSLLIAGLVLASTQVQADTLETVKSRGHVVCGTTTGFAGFSAPNDKGEWEGLDVDLCKSI 63 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 ++A+F D SK + +PLN+++RF ALQS +IDIL+RNT T R+ ++GL + ++DGQ Sbjct: 64 AAAVFGDASKFKTVPLNSQQRFTALQSGEIDILTRNTTVTQQRDTAIGLMSPGVNFYDGQ 123 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 GF++ K G+ S +L GA++C+Q GT+ E T+AD+ +A+ + Y P+VF++ E+ A+ Sbjct: 124 GFLIKKDLGVKSAKELDGATVCMQTGTSNENTMADWARANKITYKPVVFDQFNEVVNAFA 183 Query: 188 AHRCDAYTGDISALYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + RCD +T D S L +++++ P ++V+LP+IISK PL P + Q D +W+NIV W + Sbjct: 184 SGRCDVFTTDASGLASIRISKLSNPDDYVVLPEIISKEPLGPFVRQSDDKWFNIVKWVMH 243 Query: 247 AMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNY 306 A AEELGIT KN+++ K++TNP+VQR LG+ + S G+ LGL++DW Y++I+ +GNY Sbjct: 244 AQWNAEELGITSKNVDE-QKNSTNPNVQRLLGVTEGS--GKNLGLSEDWAYQVIKQVGNY 300 Query: 307 GEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GE FDRN+G S LK+PRG N L++ GGL Y PIR Sbjct: 301 GESFDRNVGKDSVLKVPRGLNKLYTDGGLHYGLPIR 336 >gi|282899899|ref|ZP_06307860.1| extracellular solute-binding protein, family 3 [Cylindrospermopsis raciborskii CS-505] gi|281195169|gb|EFA70105.1| extracellular solute-binding protein, family 3 [Cylindrospermopsis raciborskii CS-505] Length = 378 Score = 332 bits (851), Expect = 5e-89, Method: Compositional matrix adjust. Identities = 148/315 (46%), Positives = 224/315 (71%), Gaps = 3/315 (0%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 G +K L CG++ L GF+ V+ + + G DVD CRA+S+A+FD+P K+++ L+AKE Sbjct: 67 GKVKTNLRLVCGVSGELPGFSFVQTDSKYAGIDVDVCRAVSAALFDNPDKVEFRNLSAKE 126 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 RF ALQ+ ++D+LSRNT WT R+ S+GL F P+ +DGQG ++ K GI+S++ L + Sbjct: 127 RFTALQTGEVDLLSRNTTWTFSRDTSMGLYFSPVVLYDGQGIMIRKNSGINSLADLKNKA 186 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 IC Q GTTTE LAD + + Y P+VFE + A Y RCDA T D SAL + + T Sbjct: 187 ICTQTGTTTEQNLADQMRRRGISYKPVVFEDINVTFATYSEGRCDAITADRSALISRRTT 246 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 +P ++++L +++S PLAPA+ QGD +W+NIV W+ YA++ AEELGI +NI+Q + + Sbjct: 247 LPKPEDNIVLNELLSSEPLAPAVAQGDPQWHNIVKWSVYALIKAEELGINSQNISQFA-N 305 Query: 268 TTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYN 327 + +P+++RFLG + N+G+ +GLT D+ RII+H+GNYGE++DR+LG++++L +PRG N Sbjct: 306 SKDPEIKRFLGTE--GNLGQGIGLTNDFAARIIKHVGNYGEIYDRSLGSKTKLNLPRGQN 363 Query: 328 ALWSKGGLMYAPPIR 342 L+SKGGL+Y+PP R Sbjct: 364 ELYSKGGLLYSPPFR 378 >gi|89053118|ref|YP_508569.1| lysine-arginine-ornithine-binding periplasmic protein [Jannaschia sp. CCS1] gi|88862667|gb|ABD53544.1| L-glutamine-binding protein / L-glutamate-binding protein / L-asparagine-binding protein / L-aspartate-binding protein [Jannaschia sp. CCS1] Length = 338 Score = 332 bits (851), Expect = 5e-89, Method: Compositional matrix adjust. Identities = 152/342 (44%), Positives = 222/342 (64%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ L + L ++ +A LG++++RG L CG++TGL GF+ ANG+W+GFD Sbjct: 1 MKKSVFLGTLAVAGL--SAGFVSAQTLGEVQERGTLNCGVSTGLTGFSAPDANGEWQGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ D ++++P + RF AL S +ID+L+RNT WT R++ L F Sbjct: 59 VSVCRAVAAAVLGDAGAVEFVPTTGQTRFTALSSGEIDMLARNTTWTFSRDVDLAFEFVG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ ++ G+SS +L GA++C+Q GTTTEL LADYF ++NM Y P+ E Sbjct: 119 VNYYDGQGFMVPRELGVSSALELDGATVCIQTGTTTELNLADYFSSNNMSYEPVPIETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT D S L A + T + PS HV+LP+I+SK PL P + GD E+ ++ Sbjct: 179 EAQQQYLAGACDVYTTDASGLAATRATFEDPSAHVVLPEIVSKEPLGPLVRHGDNEFGDV 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT A++ AEELG+T N+ ++ T NP+++R LG + N+GE LGL W I Sbjct: 239 VRWTLNALIAAEELGVTSANVGEIGGTTENPEIRRLLGTE--GNLGEMLGLDAGWAAAAI 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+FDR++G + + + RG NA W+ GGL+YAPP R Sbjct: 297 GAGGNYGEIFDRHIGESTPIGLARGLNAQWTDGGLLYAPPFR 338 >gi|304391889|ref|ZP_07373831.1| general L-amino acid-binding periplasmic protein AapJ [Ahrensia sp. R2A130] gi|303296118|gb|EFL90476.1| general L-amino acid-binding periplasmic protein AapJ [Ahrensia sp. R2A130] Length = 342 Score = 332 bits (850), Expect = 6e-89, Method: Compositional matrix adjust. Identities = 154/327 (47%), Positives = 214/327 (65%), Gaps = 2/327 (0%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF-DDP 75 T +A+ L D+K +GFL+CG++TG GFA G+W+GFD CRA+++AIF D Sbjct: 17 MTGTVASAATLDDVKAKGFLQCGVSTGFPGFAFTDDAGNWQGFDPALCRAMAAAIFAGDS 76 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 + +++ P K RF AL S ++D+L+RNT T R++ L F P+ Y+DGQGF++ K Sbjct: 77 NAVKFTPTTGKTRFTALASGEVDVLARNTTETFSRDVDLKFTFGPVNYYDGQGFMVRKSL 136 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 G++S LSGA+ICVQ GTTTEL LADYF+A+NM Y P+ E E Y A+ CDAYT Sbjct: 137 GVTSALNLSGATICVQTGTTTELNLADYFRANNMTYEPVPIETNAEAQEKYLANACDAYT 196 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D S L A + + P++H+ILP+IISK PL P + QGD +W +I+ WT A++TAEE G Sbjct: 197 TDASGLSATRSAFEAPNDHMILPEIISKEPLGPLVRQGDDQWADILKWTLLALITAEEKG 256 Query: 256 ITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLG 315 +T N +++ +T+PD+QR LG + G LGL DW I+ GNYGE+F + LG Sbjct: 257 VTAANADEMKASSTDPDIQRLLGATEDG-FGAMLGLDNDWALNAIKAGGNYGEIFAKYLG 315 Query: 316 NQSELKIPRGYNALWSKGGLMYAPPIR 342 + + I RG NAL++ GGLMYA PIR Sbjct: 316 TDTAVGIERGLNALYTDGGLMYAAPIR 342 >gi|146278537|ref|YP_001168696.1| cationic amino acid ABC transporter, periplasmic binding protein [Rhodobacter sphaeroides ATCC 17025] gi|145556778|gb|ABP71391.1| cationic amino acid ABC transporter, periplasmic binding protein [Rhodobacter sphaeroides ATCC 17025] Length = 338 Score = 331 bits (849), Expect = 9e-89, Method: Compositional matrix adjust. Identities = 150/342 (43%), Positives = 221/342 (64%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ L + L + +A+ L D+K RG L CG++TGL GF+ ANG+W GFD Sbjct: 1 MKKSVFLGTLTVAGL--AAGLGSAATLDDVKARGELNCGVSTGLTGFSLPDANGNWTGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ D +K++++P + RF AL S ++D+L+RN+ WT R+ L L F Sbjct: 59 VALCRAVAAAVLGDGTKVKFVPTTGQTRFTALASGEVDMLARNSTWTFSRDTDLKLDFVG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K G++S +L GA++C+Q GTTTEL LAD+FK +N+ Y P+ E Sbjct: 119 VNYYDGQGFMVRKDLGVTSAKELDGATVCIQTGTTTELNLADWFKVNNLSYTPVAVETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + Y A CDAYT D S L A + P HVILP+IISK PL PA+ GD EW ++ Sbjct: 179 EGEQQYAAGACDAYTTDASGLAATRAAFADPENHVILPEIISKEPLGPAVRHGDNEWADV 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT A++ AEE G+T N+ +++ ++ NP+++R LG++ ++G + L KDW R I Sbjct: 239 VGWTLNALIAAEEYGVTSTNMEELAANSPNPEIRRLLGVE--GDLGPMIRLDKDWAKRAI 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F +G + + + RG NA W++GGL+YAPP R Sbjct: 297 SVGGNYGEIFAATIGEATPIGLARGLNAQWTQGGLLYAPPFR 338 >gi|17231656|ref|NP_488204.1| periplasmic amino acid-binding protein of amino acid ABC transporter [Nostoc sp. PCC 7120] gi|17133299|dbj|BAB75863.1| periplasmic amino acid-binding protein of amino acid ABC transporter [Nostoc sp. PCC 7120] Length = 369 Score = 331 bits (849), Expect = 9e-89, Method: Compositional matrix adjust. Identities = 151/313 (48%), Positives = 216/313 (69%), Gaps = 3/313 (0%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 IK RG L CG++ + GF+ V +G++ G DVD CRA+++A+FD+P +++ L+AKERF Sbjct: 60 IKNRGQLICGVSGEVPGFSFVGTDGEYSGIDVDVCRAIAAALFDNPDAVEFRNLSAKERF 119 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 ALQ+ ++DILSRNT WTL R S+GL F P+ ++DGQ ++ K I S++ L +IC Sbjct: 120 TALQTGEVDILSRNTTWTLSRATSVGLEFAPVVFYDGQAIMVRKNSAIKSLADLKDKAIC 179 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 VQ GTTTE LAD + N+ Y P+VFE V A Y RCDA T D SAL + + T Sbjct: 180 VQTGTTTEQNLADQMRKRNITYKPVVFEDVNVTFATYAEGRCDAITADRSALVSRRTTLP 239 Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 P ++V+L ++IS PLAPA+ +GD +W N V+W YA++ EELGI +N+ Q + + Sbjct: 240 TPEDNVVLDEVISSEPLAPAVARGDAKWSNTVNWVVYALIKGEELGINAQNLGQFTT-SN 298 Query: 270 NPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNAL 329 +PDV+RFLG + ++G+ LGLT D+ RII+H+GNY E++DRNLG +++L + RG N L Sbjct: 299 DPDVKRFLGTE--GDLGQGLGLTNDFAARIIKHVGNYAEVYDRNLGPKTKLNLARGQNQL 356 Query: 330 WSKGGLMYAPPIR 342 WSKGGL+Y+PP R Sbjct: 357 WSKGGLLYSPPFR 369 >gi|293602040|ref|ZP_06684495.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] gi|292819570|gb|EFF78596.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] Length = 361 Score = 330 bits (846), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 151/329 (45%), Positives = 227/329 (68%), Gaps = 4/329 (1%) Query: 15 LFFTSFSTNASILGD-IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 LF +S++ A + D +K +GF++CG++TG+ GF+ + G W G DVD CRAL+ +F Sbjct: 36 LFLSSWAATAGVTFDSVKNKGFVQCGVSTGVAGFSVNDSKGGWIGLDVDLCRALAITMFG 95 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 DP+K + + ++A +RF ALQS ++D+L RNT +L R+ +LGL + Y+D QG +++K Sbjct: 96 DPAKSKIMAVSAVQRFTALQSGEVDVLPRNTTLSLTRDTTLGLIGVGVNYYDSQGIMVNK 155 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 + S +L GA++CVQ GTTTEL LAD+F++ N+ + P+V ER++EI A+ RCDA Sbjct: 156 SLNVKSAKELDGATVCVQPGTTTELNLADWFRSQNIVFKPVVVERLDEIIRAFAVGRCDA 215 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 +TGD S L A + + P ++ ILP+ SK PL P + QGD +W+N+V WT +AM+ AEE Sbjct: 216 FTGDKSQLAAARSNLENPGQYDILPENFSKEPLGPMVRQGDEQWFNVVRWTMFAMLEAEE 275 Query: 254 LGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRN 313 G+T KN++++ K +TNP+VQR LG+ + +G+ LG+ W Y II+H+GNYGE F++N Sbjct: 276 YGVTSKNVDEMLK-STNPNVQRLLGV--TPGMGKNLGVDDKWAYNIIKHIGNYGESFEKN 332 Query: 314 LGNQSELKIPRGYNALWSKGGLMYAPPIR 342 LG S LK+ RG NA + GGLMY P+R Sbjct: 333 LGPSSPLKLSRGLNASYRDGGLMYGWPVR 361 >gi|254463676|ref|ZP_05077087.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Rhodobacterales bacterium Y4I] gi|206684584|gb|EDZ45066.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Rhodobacterales bacterium Y4I] Length = 338 Score = 330 bits (846), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 154/316 (48%), Positives = 213/316 (67%), Gaps = 2/316 (0%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L D+K RG L CG+ TGLVGFA ANG+W+GFDV CRA+++A+ D + ++++P K Sbjct: 25 LDDVKARGKLNCGVTTGLVGFAAPNANGEWEGFDVAVCRAVAAAVLGDSTAVEFVPTTGK 84 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 RF AL S +ID+L+RNT WT R++ L F + Y+DGQGF++ K+ G+SS +L GA Sbjct: 85 TRFTALASGEIDMLARNTTWTFSRDVDLKFEFVGVNYYDGQGFMVPKELGVSSAKELDGA 144 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 ++C+Q GTTTEL LAD+F+++N+ Y P+ E E Y A CD YT D S L A + Sbjct: 145 TVCIQTGTTTELNLADFFRSNNISYEPVPIETNAEAQQQYLAGSCDVYTTDASGLAATRA 204 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 T D PS HVILP+IISK PL P + GD EW ++V W+ A++ AEELGIT NIN+++ Sbjct: 205 TFDDPSGHVILPEIISKEPLGPLVRHGDHEWGDVVRWSLMALIAAEELGITSANINEMAA 264 Query: 267 DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGY 326 T NP++ R LG N+GE LGL DW + + GNYGE+F +N+G + + + RG Sbjct: 265 GTENPEINRLLG--SEGNLGEMLGLNADWAMKAVAAGGNYGEIFAKNIGEDTPVGLARGL 322 Query: 327 NALWSKGGLMYAPPIR 342 NA W++GGL+YAPP R Sbjct: 323 NAQWTEGGLLYAPPFR 338 >gi|83854941|ref|ZP_00948471.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Sulfitobacter sp. NAS-14.1] gi|83941464|ref|ZP_00953926.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Sulfitobacter sp. EE-36] gi|83842784|gb|EAP81951.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Sulfitobacter sp. NAS-14.1] gi|83847284|gb|EAP85159.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Sulfitobacter sp. EE-36] Length = 347 Score = 330 bits (846), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 152/318 (47%), Positives = 212/318 (66%), Gaps = 2/318 (0%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L D+K RG L CG+ TGL GFA ANG+W+GFDV CRA+++A+ DP+ ++++P Sbjct: 32 STLDDVKARGKLNCGVTTGLAGFAAPNANGEWEGFDVAVCRAVAAAVLGDPAAVEFIPTT 91 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 K RF AL S +ID L+RNT WT R++ L F + Y+DGQGF++ K+ G+SS L Sbjct: 92 GKTRFTALASGEIDFLARNTTWTFSRDVDLKFDFIGVNYYDGQGFMVPKELGVSSAKDLD 151 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 GA++C+Q GTTTEL LAD+F+ +N+ Y P+ E E Y A CD YT D S L A Sbjct: 152 GATVCIQTGTTTELNLADFFRNNNISYEPVPVETNAEGQQQYLAGACDTYTTDASGLAAT 211 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 + T + P EH+ILP+IISK PL P + GD +W ++ W YA++ AEELG+T N+ ++ Sbjct: 212 RATFENPGEHIILPEIISKEPLGPLVRHGDNDWGDVTRWVLYALIAAEELGVTSANVEEM 271 Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324 + +TTNP+V R LG + + +GE LGL DW + I GNYGE+F +N+G ++ + + R Sbjct: 272 TTNTTNPEVARLLGTEGT--LGEMLGLEADWAKKAIASQGNYGEIFAKNIGEETPIGLAR 329 Query: 325 GYNALWSKGGLMYAPPIR 342 G NA W+ GGLMYAPP R Sbjct: 330 GLNAQWTDGGLMYAPPFR 347 >gi|259415913|ref|ZP_05739833.1| glutamate/glutamine/aspartate/asparagine-binding protein bztAprecursor [Silicibacter sp. TrichCH4B] gi|259347352|gb|EEW59129.1| glutamate/glutamine/aspartate/asparagine-binding protein bztAprecursor [Silicibacter sp. TrichCH4B] Length = 378 Score = 330 bits (845), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 154/316 (48%), Positives = 212/316 (67%), Gaps = 2/316 (0%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L D+K R L CG++TGLVGF+ ANG+W+GFD+ CRA+++A+ DPSK++Y+P K Sbjct: 65 LDDVKARDKLNCGVSTGLVGFSAPNANGEWEGFDIAVCRAVAAAVLGDPSKVEYVPTTGK 124 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 RF AL S ++D+L+RNT WT R++ L F + Y+DGQGF++ K+ G+SS +L GA Sbjct: 125 TRFTALASGEVDVLARNTTWTFSRDVDLKFEFIGVNYYDGQGFMIPKELGVSSAKELDGA 184 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 ++C+Q GTTTEL LAD+F+A+N+ Y P+ E E Y A CD YT D S L A + Sbjct: 185 TVCIQTGTTTELNLADFFRANNISYEPVPIETNAEARQQYLAGACDVYTTDASGLAATRA 244 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 T D PS HVILP+IISK PL P + GD EW ++V WT A+V AEELGIT N+++ + Sbjct: 245 TFDDPSNHVILPEIISKEPLGPLVRHGDNEWGDVVRWTLNALVAAEELGITSANMSEKAA 304 Query: 267 DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGY 326 T NP++ R LG N+GE LGL DW + + GNYGE+F + +G + + + RG Sbjct: 305 GTDNPEINRLLG--SEGNLGEMLGLDADWAQKALAAGGNYGEIFAKTIGEDTPVGLARGL 362 Query: 327 NALWSKGGLMYAPPIR 342 NA W+ GGL+YAPP R Sbjct: 363 NAQWTDGGLLYAPPFR 378 >gi|163859070|ref|YP_001633368.1| putative extracellular solute-binding protein [Bordetella petrii DSM 12804] gi|163262798|emb|CAP45101.1| putative extracellular solute-binding protein [Bordetella petrii] Length = 338 Score = 330 bits (845), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 151/336 (44%), Positives = 226/336 (67%), Gaps = 4/336 (1%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 S++ +L A+ L ++KRG L+CG TG GF+ A G W+G DVD CRA+ Sbjct: 6 SLIGATLLLGAMAGAQAATLDVVQKRGELRCGTTTGFAGFSAPDAQGVWRGLDVDLCRAV 65 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 ++A+F D +KI+ +PLN+++RF ALQS +ID+L+RNT T R+ +LG+ I ++DGQ Sbjct: 66 AAAVFGDANKIKIVPLNSQQRFTALQSGEIDVLTRNTTVTQQRDTALGIIHAGINFYDGQ 125 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 GF++ K G+ S ++L+GA+IC+Q GT+ E TLAD+ +AHN+ Y P+V E E+ A+ Sbjct: 126 GFLVPKSLGVQSATELNGATICLQTGTSNENTLADWARAHNVSYKPVVIETFNEVVNAFA 185 Query: 188 AHRCDAYTGDISALYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + RCD ++ D S L +++++ P ++++LP+IISK PL P + QGD W N+V W+ Sbjct: 186 SGRCDVFSTDASGLASIRISKLQNPDDYLVLPEIISKEPLGPFVRQGDDAWLNVVHWSLS 245 Query: 247 AMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNY 306 AM+ AEE GIT N++Q + NP+++R LG+ + G +GL + W Y II+ +GNY Sbjct: 246 AMIEAEEYGITSANVDQ-QLQSANPNIRRMLGVTPGA--GANMGLDEKWAYNIIKQVGNY 302 Query: 307 GEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GE F+RN+G S LKI RG NA W++GGLMYA PIR Sbjct: 303 GESFERNVGAGSPLKIKRGLNAQWTQGGLMYALPIR 338 >gi|298491367|ref|YP_003721544.1| family 1 extracellular solute-binding protein ['Nostoc azollae' 0708] gi|298233285|gb|ADI64421.1| extracellular solute-binding protein family 3 ['Nostoc azollae' 0708] Length = 355 Score = 330 bits (845), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 149/313 (47%), Positives = 217/313 (69%), Gaps = 3/313 (0%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 +K RG L CG++ L GF+ V + + G DVD CRA+++A+FD+P +++ LN KERF Sbjct: 46 VKNRGKLICGVSGELPGFSFVGTDAKYSGIDVDVCRAVTAALFDNPDAVEFRNLNTKERF 105 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 ALQ+ +ID+LSRNT WT+ RE S+GL F P+ ++DGQ ++ K GI S++ L +IC Sbjct: 106 TALQTGEIDLLSRNTTWTMSRETSVGLQFAPVIFYDGQAIMVSKNSGIKSLADLKNKAIC 165 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 Q GTTTE LAD + ++ Y P+VFE V A Y RCD T D SAL + + T Sbjct: 166 TQTGTTTEQNLADQMRKRSITYKPVVFEDVNITFATYAEGRCDGVTTDRSALISRRTTLP 225 Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 +P +++IL +++S PLAPA+ +GD +W +IV W Y++V AEELGI +NI Q++ ++ Sbjct: 226 KPEDNIILDELLSSEPLAPAVAKGDPQWNDIVKWVVYSLVKAEELGINSQNIAQLT-NSN 284 Query: 270 NPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNAL 329 +PD++RFLG + N+GE LGLT D+ RI++H+GNYGE++DRNLG +++L +PRG N L Sbjct: 285 DPDIKRFLGTE--GNLGEGLGLTNDFAARIVKHVGNYGEVYDRNLGGKTKLNLPRGQNQL 342 Query: 330 WSKGGLMYAPPIR 342 KGGL+Y+PP R Sbjct: 343 AIKGGLLYSPPFR 355 >gi|154245585|ref|YP_001416543.1| extracellular solute-binding protein [Xanthobacter autotrophicus Py2] gi|154159670|gb|ABS66886.1| extracellular solute-binding protein family 3 [Xanthobacter autotrophicus Py2] Length = 337 Score = 329 bits (844), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 148/313 (47%), Positives = 210/313 (67%), Gaps = 3/313 (0%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 +K RG L CG++ GL GF+ A+G W GFDVD CR L++AIF+DP+K++++PL+A ERF Sbjct: 28 VKDRGELVCGVSKGLPGFSAPDASGKWTGFDVDVCRGLAAAIFNDPNKVKFVPLSADERF 87 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 AL +D+LSRN+ WTL RE LGL F I Y+DGQGF++ + ++S +L + +C Sbjct: 88 PALTKGDVDMLSRNSTWTLEREAKLGLLFTAINYYDGQGFLVRDARKVTSALELDKSKVC 147 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 VQAGTT E DYF A+ M + ++ AY +CD T D+S LYAL+LT Sbjct: 148 VQAGTTAEDNTKDYFAANGMTLELVTLPTSTDLVKAYEEGKCDTLTTDVSQLYALRLTMA 207 Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 +P +H++LPD+ISK PL P + QGD +W+N+V WT + M+ AEELG++ I+ + + Sbjct: 208 KPGDHIVLPDVISKEPLGPVVRQGDDQWFNLVKWTIFGMINAEELGVSTTTID-AALASK 266 Query: 270 NPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNAL 329 P+V R +G D GE LG++ D+ RI++ +GNYGE F+RN+G S+L IPRG N L Sbjct: 267 KPEVIRLVGND--GKFGEQLGVSNDFVVRIVKAVGNYGESFERNVGAASKLGIPRGINQL 324 Query: 330 WSKGGLMYAPPIR 342 WS GG+ YAPP+R Sbjct: 325 WSMGGIQYAPPVR 337 >gi|197105093|ref|YP_002130470.1| lysine-arginine-ornithine-binding periplasmic protein [Phenylobacterium zucineum HLK1] gi|196478513|gb|ACG78041.1| lysine-arginine-ornithine-binding periplasmic protein [Phenylobacterium zucineum HLK1] Length = 337 Score = 328 bits (842), Expect = 5e-88, Method: Compositional matrix adjust. Identities = 146/324 (45%), Positives = 221/324 (68%), Gaps = 4/324 (1%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 +T + L +++RG + CG++ GL GFA A G W+GFDVD CRA+++A+F D ++++ Sbjct: 16 ATPSPTLEAVRRRGRVTCGVHPGLPGFAMRDARGIWRGFDVDVCRAVAAAVFGDAERVRF 75 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +P++ +RF L++++IDILSRNT TL R+ LGL F TY+DGQGF++ + G++S Sbjct: 76 VPIDGSDRFRELRAERIDILSRNTSLTLSRDAGLGLTFPATTYYDGQGFLVARALGVASA 135 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 +L GA +CVQAGT +E LAD+F+A + Y P++ + E+ Y + CD ++ DIS Sbjct: 136 EELGGARVCVQAGTASETNLADFFRARGLDYQPVLAKSEEDARRLYESDGCDVFSADISG 195 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L A + P+ HVILP++ISK PL P + Q D W +IV+WT +A+V AEELG++ + Sbjct: 196 LAASRSLLSNPNGHVILPNVISKEPLGPVVRQDDPAWADIVAWTVHAIVLAEELGLSSRT 255 Query: 261 INQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSEL 320 + Q + T+P+ +R LG++ N+GE LG+ +DW Y++IR +G Y E+F R+LG S L Sbjct: 256 VEQARETATDPETRRLLGVE--GNLGELLGVRRDWAYQVIRQVGAYHEIFRRDLGADSAL 313 Query: 321 KIPRGYNALWS--KGGLMYAPPIR 342 K+ RG NALW+ K GLMYAPP+R Sbjct: 314 KLERGLNALWTAPKPGLMYAPPVR 337 >gi|148658095|ref|YP_001278300.1| extracellular solute-binding protein [Roseiflexus sp. RS-1] gi|148570205|gb|ABQ92350.1| extracellular solute-binding protein, family 3 [Roseiflexus sp. RS-1] Length = 389 Score = 328 bits (842), Expect = 6e-88, Method: Compositional matrix adjust. Identities = 152/316 (48%), Positives = 210/316 (66%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L I+ RG L CG+N+ + GF V G + GFD+D+C+AL++AIF+D SK++Y PL A+ Sbjct: 74 LKAIQARGKLICGVNSQVPGFGFVDPTGAFSGFDIDYCKALAAAIFNDVSKVEYRPLTAE 133 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 +RF ALQS +ID+L RNT WTL R+ G F T++DGQG ++ K I+ + L+GA Sbjct: 134 QRFAALQSGEIDVLIRNTTWTLTRDTDNGGNFVATTFYDGQGIMVPKASNITKLEDLNGA 193 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 +ICVQ GTTTEL LAD A ++Y P VFE AAY RCDA T D S L + + Sbjct: 194 TICVQKGTTTELNLADQMAARKLQYTPAVFEDANSTFAAYAEERCDAVTTDKSGLVSRRS 253 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 P +HVIL +SK PL P + QGD +W++IV WT +A AEE GIT +N++Q + Sbjct: 254 VLPNPDDHVILDVTLSKEPLGPMVRQGDDQWFDIVQWTVFATFAAEEFGITSRNVDQAKE 313 Query: 267 DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGY 326 T P+V+R LG D + ++G LGL+KDW +I+ +GNY E++DRNLG ++ IPRG Sbjct: 314 SDTRPEVRRLLGADPNVDLGAKLGLSKDWAANVIKSVGNYAEIYDRNLGPNTKTAIPRGI 373 Query: 327 NALWSKGGLMYAPPIR 342 N L+++GGL+YAPP R Sbjct: 374 NNLYTQGGLLYAPPFR 389 >gi|317401305|gb|EFV81945.1| amino acid-binding periplasmic protein [Achromobacter xylosoxidans C54] Length = 338 Score = 328 bits (841), Expect = 6e-88, Method: Compositional matrix adjust. Identities = 147/330 (44%), Positives = 225/330 (68%), Gaps = 4/330 (1%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 +L + A+ L +++RG + CG TG GF+ A G W+G DVD CRA+++A+F Sbjct: 12 LLLAVAQGAQAATLDVVRQRGAVACGTTTGFAGFSAPDAQGKWQGLDVDLCRAIAAAVFG 71 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 D +KI+ +PLN+++RF ALQS ++D+L+RNT T R+ +LG+ I ++DGQGF++ K Sbjct: 72 DANKIKVVPLNSQQRFTALQSGEVDVLTRNTTVTQQRDTALGIIHAGINFYDGQGFLVPK 131 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 G+ S +++GA+IC+Q GT+ E TLAD+ +A+N+ Y P+V E E+ A+ A RCD Sbjct: 132 SLGVKSAKEINGATICLQTGTSNENTLADWARANNVTYKPVVIETFNEVVNAFAAGRCDV 191 Query: 194 YTGDISALYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 ++ D S L +++++ P ++V+LP+IISK PL P + QGD W NIV W+ AM+ AE Sbjct: 192 FSTDASGLASIRISKLQNPDDYVVLPEIISKEPLGPFVRQGDDAWLNIVRWSLSAMIEAE 251 Query: 253 ELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDR 312 E G+T +N+++ +K ++NP+++R LG+ G LGL + W Y I++ +GNYGE F+R Sbjct: 252 EYGVTSRNVDEQAK-SSNPNIKRILGVTPGG--GANLGLDEKWAYNIVKQVGNYGESFER 308 Query: 313 NLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 N+G S LKI RG NA W++GGLMYA PIR Sbjct: 309 NVGQGSPLKIKRGLNAQWTQGGLMYALPIR 338 >gi|156741438|ref|YP_001431567.1| extracellular solute-binding protein [Roseiflexus castenholzii DSM 13941] gi|156232766|gb|ABU57549.1| extracellular solute-binding protein family 3 [Roseiflexus castenholzii DSM 13941] Length = 389 Score = 328 bits (841), Expect = 7e-88, Method: Compositional matrix adjust. Identities = 152/313 (48%), Positives = 209/313 (66%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 I+ RG L CG+N+ + GF V G + GFD+D+C+AL++AIF+D SKI+Y PL A++RF Sbjct: 77 IQARGKLICGVNSQVPGFGFVDPTGAFSGFDIDYCKALAAAIFNDVSKIEYRPLTAEQRF 136 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 ALQS +ID+L RNT WTL R+ G F T++DGQG ++ K I+ + L+GA+IC Sbjct: 137 AALQSGEIDVLIRNTTWTLTRDTDNGGNFVATTFYDGQGIMVPKASNITKLEDLNGATIC 196 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 VQ GTTTEL LAD A N+ Y P FE AAY RCDA T D S L + + Sbjct: 197 VQKGTTTELNLADQMNARNLAYTPATFEDANSTFAAYAEERCDAVTTDKSGLVSRRSVLP 256 Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 P +HVIL +SK PL P + QGD +W++IV W +A AEE GIT +N++Q+ + T Sbjct: 257 NPDDHVILDVTLSKEPLGPMVRQGDDQWFDIVQWAVFATFAAEEFGITSQNVDQLKETDT 316 Query: 270 NPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNAL 329 P+V+R LG D + ++G LGL+KDW +I+ +GNYGE++DRNLG ++ IPRG N L Sbjct: 317 RPEVRRLLGADPNVDLGAKLGLSKDWAANVIKAVGNYGEIYDRNLGPNTKTAIPRGINNL 376 Query: 330 WSKGGLMYAPPIR 342 +++GGL+YAPP R Sbjct: 377 YTQGGLLYAPPFR 389 >gi|126737042|ref|ZP_01752777.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Roseobacter sp. SK209-2-6] gi|126721627|gb|EBA18330.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Roseobacter sp. SK209-2-6] Length = 338 Score = 328 bits (841), Expect = 7e-88, Method: Compositional matrix adjust. Identities = 151/316 (47%), Positives = 215/316 (68%), Gaps = 2/316 (0%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L D+K RG L CG+ TGLVGFA ANG+W+GFDV CRA+++A D + ++++P K Sbjct: 25 LDDVKARGKLNCGVTTGLVGFAAPNANGEWEGFDVAVCRAVAAAALGDSTAVEFVPTTGK 84 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 RF AL S +ID+L+RNT WT R++ L F + Y+DGQGF++ K+ G+SS +L GA Sbjct: 85 TRFTALASGEIDMLARNTTWTFSRDVDLKFEFTGVNYYDGQGFMVPKELGVSSAKELDGA 144 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 ++C+Q GTTTEL LAD+F+++N+ Y P+ E E Y A CD YT D S L A + Sbjct: 145 TVCIQTGTTTELNLADFFRSNNISYEPVPIETNAEAQQQYLAGACDVYTTDASGLAATRA 204 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 T D P++HV+LP+IISK PL P + GD EW ++V WT A++TAEELG+T NI ++S Sbjct: 205 TFDAPADHVLLPEIISKEPLGPLVRHGDHEWGDVVRWTLNALITAEELGVTSANIAEMSA 264 Query: 267 DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGY 326 T+NP++ R LG + + +GE LGL+ DW + GNYGE+F +N+G + + + RG Sbjct: 265 GTSNPEINRLLGTEGT--LGEMLGLSADWGKNAVAAGGNYGEVFAKNIGEDTPIGLARGL 322 Query: 327 NALWSKGGLMYAPPIR 342 NA W++GGL+Y+PP R Sbjct: 323 NAQWTEGGLLYSPPFR 338 >gi|77462291|ref|YP_351795.1| ABC glutamate/glutamine/aspartate/asparagine transporter, periplasmic substrate-binding protein [Rhodobacter sphaeroides 2.4.1] gi|221638145|ref|YP_002524407.1| Cationic amino acid ABC transporter periplasmic binding protein [Rhodobacter sphaeroides KD131] gi|77386709|gb|ABA77894.1| ABC glutamate/glutamine/aspartate/asparagine transporter, periplasmic substrate-binding protein [Rhodobacter sphaeroides 2.4.1] gi|221158926|gb|ACL99905.1| Cationic amino acid ABC transporter, periplasmic binding protein precursor [Rhodobacter sphaeroides KD131] Length = 338 Score = 327 bits (839), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 149/342 (43%), Positives = 219/342 (64%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ L + + +A+ L D+K RG L CG++TGL GF+ ANG+W GFD Sbjct: 1 MTKSVFLGTLT--VAGLAAGLASAATLDDVKARGELNCGVSTGLTGFSLPDANGNWTGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ D +K++++P + RF AL S ++D+L+RN+ WT R+ L L F Sbjct: 59 VSLCRAVAAAVLGDGTKVKFVPTTGQTRFTALASGEVDMLARNSTWTFSRDTDLKLDFVG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K G++S +L GA++C+Q GTTTEL LAD+FK +N+ Y P+ E Sbjct: 119 VNYYDGQGFMVRKDLGVTSAKELDGATVCIQTGTTTELNLADWFKVNNLSYTPVAVETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + Y A CDAYT D S L A + P H+ILP+IISK PL PA+ GD EW +I Sbjct: 179 EGEQQYAAGACDAYTTDASGLAATRAAFADPENHIILPEIISKEPLGPAVRHGDNEWADI 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT A++ AEE G+T N+ +++ ++ NP++QR LG+ ++G+ + L DW R I Sbjct: 239 VRWTLNALIAAEEYGVTSANMEELAANSPNPEIQRLLGV--QGDLGKMIRLDNDWAKRAI 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F +G + + + RG NA W++GGL+YAPP R Sbjct: 297 AVGGNYGEIFAATIGEATPIGLARGLNAQWTQGGLLYAPPFR 338 >gi|89070522|ref|ZP_01157811.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Oceanicola granulosus HTCC2516] gi|89043829|gb|EAR50027.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Oceanicola granulosus HTCC2516] Length = 339 Score = 327 bits (839), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 150/317 (47%), Positives = 208/317 (65%), Gaps = 3/317 (0%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L D+K RG L CG++TGL GF+ ANG W+GFDV FCRAL++A+ DP+ ++++P + Sbjct: 25 LDDVKARGTLNCGVSTGLTGFSAPDANGVWQGFDVAFCRALAAAVLGDPNAVEFVPTTGQ 84 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 RF AL S +ID+L+RNT WT R+ L F + Y+DGQGFI+ ++ G++S +L GA Sbjct: 85 TRFTALSSNEIDVLARNTTWTFSRDNDLKFEFAGVNYYDGQGFIVPRELGVASAMELDGA 144 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 ++C+Q GTTTEL LAD+F+ ++M+Y P+ E E Y A CDAYT D S L A + Sbjct: 145 TVCIQTGTTTELNLADFFRVNDMEYEPVPIETNAEAQQQYLAGACDAYTTDASGLAATRA 204 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 T + P +HVILP+IISK PL P + GD EW +IV WT A++ AEE G+T NI Q++ Sbjct: 205 TFENPEDHVILPEIISKEPLGPLVRHGDPEWGDIVRWTLQALIAAEEYGVTSANIEQMAS 264 Query: 267 DT-TNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRG 325 + N +V R LG + +G +GL DW R I GNYGE+F+ N+G S + + RG Sbjct: 265 EAGDNAEVNRLLGTE--GELGAMIGLDSDWAQRAIAAGGNYGEIFENNIGESSPVGLARG 322 Query: 326 YNALWSKGGLMYAPPIR 342 NA +S GGL+YA P R Sbjct: 323 LNAQYSNGGLIYALPFR 339 >gi|260577146|ref|ZP_05845123.1| cationic amino acid ABC transporter, periplasmic binding protein [Rhodobacter sp. SW2] gi|259020620|gb|EEW23939.1| cationic amino acid ABC transporter, periplasmic binding protein [Rhodobacter sp. SW2] Length = 339 Score = 327 bits (839), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 157/342 (45%), Positives = 217/342 (63%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ L + L + A L D+K RG L CG N GL GFA ANG+++GFD Sbjct: 1 MKKSVFLGTLAVSGLL--AGMAAAGTLDDVKARGILNCGSNNGLTGFAAPDANGNYQGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 C+A+++A+ D SK++++PL + RF AL S ++D+L RN+ WT R+ L F Sbjct: 59 AALCKAIAAAVLGDASKVKFVPLTGETRFTALASGEVDVLIRNSTWTFSRDTDLKFDFVA 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K+ G+SS +L GA++C+Q GTTTEL LAD+FK++NM Y P+ Sbjct: 119 VNYYDGQGFMVKKELGVSSAKELDGATVCIQTGTTTELNLADFFKSNNMSYTPVTIADDS 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CDAYT D S L A++ T H+ILP+IISK PL P + GD W +I Sbjct: 179 EGQRQYVAGACDAYTTDASGLAAVRATLPDAENHIILPEIISKEPLGPVVRHGDNNWGDI 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT+YA+V+AEE GIT N+ + + TTNP+++R LG N+G +GL K+W R I Sbjct: 239 VRWTYYALVSAEENGITAANVEETASTTTNPEIKRLLGA-SDDNLGAMMGLDKEWAKRAI 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F NLG + + + RG NALW++GGL YAPP R Sbjct: 298 AAQGNYGEIFAANLGESTSIGLARGLNALWTQGGLQYAPPFR 339 >gi|126461167|ref|YP_001042281.1| cationic amino acid ABC transporter, periplasmic binding protein [Rhodobacter sphaeroides ATCC 17029] gi|126102831|gb|ABN75509.1| cationic amino acid ABC transporter, periplasmic binding protein [Rhodobacter sphaeroides ATCC 17029] Length = 338 Score = 327 bits (838), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 149/342 (43%), Positives = 219/342 (64%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ L + + +A+ L D+K RG L CG++TGL GF+ ANG+W GFD Sbjct: 1 MTKSVFLGTLT--VAGLAAGLASAATLDDVKARGELNCGVSTGLTGFSLPDANGNWTGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ D +K++++P + RF AL S ++D+L+RN+ WT R+ L L F Sbjct: 59 VSLCRAVAAAVLGDGTKVKFVPTTGQTRFTALASGEVDMLARNSTWTFSRDTDLKLDFVG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K G++S +L GA++C+Q GTTTEL LAD+FK +N+ Y P+ E Sbjct: 119 VNYYDGQGFMVRKDLGVTSAKELDGATVCIQTGTTTELNLADWFKVNNLSYTPVAVETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + Y A CDAYT D S L A + P H+ILP+IISK PL PA+ GD EW +I Sbjct: 179 EGEQQYAAGACDAYTTDASGLAATRAAFADPENHIILPEIISKEPLGPAVRHGDNEWADI 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT A++ AEE G+T N+ +++ ++ NP++QR LG+ ++G+ + L DW R I Sbjct: 239 VRWTLNALIAAEEYGVTSANMEELAANSPNPEIQRVLGV--QGDLGKMIRLDNDWAKRAI 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F +G + + + RG NA W++GGL+YAPP R Sbjct: 297 AVGGNYGEIFAATIGEATPIGLARGLNAQWTQGGLLYAPPFR 338 >gi|82545639|ref|YP_409586.1| periplasmic binding transport protein [Shigella boydii Sb227] gi|81247050|gb|ABB67758.1| putative periplasmic binding transport protein [Shigella boydii Sb227] Length = 321 Score = 327 bits (837), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 150/323 (46%), Positives = 218/323 (67%), Gaps = 18/323 (5%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDF----------------CRALSSAIFDDPSKIQ 79 ++CGI+ GL+GF+ A+G + G DVD CR++++A+F D +K++ Sbjct: 1 MQCGISDGLLGFSYADADGKFSGIDVDVDVDVDVDVDVDVDVDVCRSVAAAVFGDDTKVK 60 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 Y PL AKERF ALQS ++D+LSRNT WT R+ +G+AF +TY+DG GF+ H K G+ S Sbjct: 61 YTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKS 120 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R +E A + RCD D S Sbjct: 121 AKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQS 180 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 LYAL++ P+E ++LP++ISK PL P + +GD EW++IV WT +AM+ AEE+GI + Sbjct: 181 QLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQ 240 Query: 260 NINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSE 319 N+++ + + PD+ LG K + G+ L L W Y II+ +GNY E+F+RN+G++S Sbjct: 241 NVDEKAANPATPDMAHLLG--KEGDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESP 298 Query: 320 LKIPRGYNALWSKGGLMYAPPIR 342 LKI RG N LW+ GG+ YAPP+R Sbjct: 299 LKIKRGQNNLWNNGGIQYAPPVR 321 >gi|302339786|ref|YP_003804992.1| extracellular solute-binding protein family 3 [Spirochaeta smaragdinae DSM 11293] gi|301636971|gb|ADK82398.1| extracellular solute-binding protein family 3 [Spirochaeta smaragdinae DSM 11293] Length = 365 Score = 326 bits (836), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 153/321 (47%), Positives = 215/321 (66%), Gaps = 2/321 (0%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 T S L +K+RG + G+ G+ G++ + G W+GFDVD RA+++A+ DP I+ Sbjct: 47 TGKSTLELVKERGKVIVGVTAGVPGYSAPDSEGIWQGFDVDLGRAVAAAVLGDPDAIECR 106 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 PL+AKERF ALQS +ID+L R T WT R+ LG+ F + Y+DGQGF++ K GI+S++ Sbjct: 107 PLSAKERFTALQSGEIDVLVRVTTWTATRDSQLGVNFAGVNYYDGQGFMVAKDSGITSLA 166 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L GA++ VQ+GTTTEL L+DYF+ +NM + I FE+ ++ AA A R DA T D S L Sbjct: 167 DLDGATVAVQSGTTTELNLSDYFRKNNMDFELITFEKNDQASAALEAGRADAVTSDQSQL 226 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 YAL+ P ++LP++ISK PL P + QGD EW+NIV WT +AM+ AEE GIT N+ Sbjct: 227 YALRTKFKEPENFIMLPELISKEPLGPVVRQGDDEWFNIVKWTLFAMLNAEEYGITSDNV 286 Query: 262 NQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELK 321 +++ + + NP+V+R LG + E GL + Y II+++GNYGE F+RNLG+ S L Sbjct: 287 DEMKETSDNPNVKRLLG--SEGGVWEGFGLESNAGYNIIKYIGNYGESFERNLGSGSPLN 344 Query: 322 IPRGYNALWSKGGLMYAPPIR 342 I RG NALW+KGG+ Y PIR Sbjct: 345 ISRGLNALWTKGGIQYGMPIR 365 >gi|187476710|ref|YP_784733.1| amino acid-binding periplasmic protein [Bordetella avium 197N] gi|115421296|emb|CAJ47801.1| amino acid-binding periplasmic protein [Bordetella avium 197N] Length = 338 Score = 326 bits (836), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 153/339 (45%), Positives = 226/339 (66%), Gaps = 5/339 (1%) Query: 6 FVSILCLIILFFTSF-STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 S++ L L T S A L +K R + CG TG GF+ A G W+G DVD C Sbjct: 3 IASLVALAALSLTGLQSAQAGTLDVVKNRDAVVCGTTTGFAGFSAPDAQGVWRGLDVDLC 62 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 RA+++A+ D +KI+ +PLN+++RF ALQS ++D+L+RNT T R+ +LG+ I ++ Sbjct: 63 RAVAAAVLGDANKIKIVPLNSQQRFTALQSGEVDVLTRNTSVTQQRDTALGIIHAGINFY 122 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 DGQGF++ KK G+ S +L+GA+IC+Q GT+ E TLAD+ +A+N++Y P+V E E+ Sbjct: 123 DGQGFLVPKKLGVKSAKELNGATICLQQGTSNENTLADWARANNVQYTPVVIETFNEVVN 182 Query: 185 AYRAHRCDAYTGDISALYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 A+ A RCD ++ D S L +++++ ++P ++++LP++ISK PL P + QGD W NIV W Sbjct: 183 AFAAGRCDVFSTDASGLASIRISKLEKPDDYIVLPEVISKEPLGPFVRQGDDNWLNIVYW 242 Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHM 303 T AM+ AEE G+T N+++ K + NP+V+R LG+ + G +GL W Y I++ + Sbjct: 243 TLTAMIEAEEYGLTSANVDEQLK-SENPNVRRILGVVPGA--GPNMGLNDKWAYNIVKQV 299 Query: 304 GNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE FDRN+G S LKI RG NA W+KGGLMYA PIR Sbjct: 300 GNYGESFDRNVGKGSPLKIDRGLNAQWTKGGLMYALPIR 338 >gi|260545549|ref|ZP_05821290.1| cationic amino acid ABC transporter [Brucella abortus NCTC 8038] gi|260096956|gb|EEW80831.1| cationic amino acid ABC transporter [Brucella abortus NCTC 8038] Length = 266 Score = 325 bits (834), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 150/267 (56%), Positives = 200/267 (74%), Gaps = 3/267 (1%) Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-- 135 +++ PLNAKERF A QS ++D+L RNT WT+ R+ SLGL F I Y+DGQGF+++ KK Sbjct: 1 MKFTPLNAKERFTAFQSGEVDVLIRNTTWTISRDTSLGLDFAGINYYDGQGFMINSKKLA 60 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 GI+S QLSGASICVQAGTTTEL +ADYF+A+ M+Y+P+VFE++EE +AAY + RCDAYT Sbjct: 61 GINSALQLSGASICVQAGTTTELNMADYFRANKMEYNPVVFEKIEEANAAYDSGRCDAYT 120 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D S+LY ++L P +HVILP+IISK P + QGD W ++V WTH A++ AEE G Sbjct: 121 TDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDARWADVVRWTHNALLNAEEYG 180 Query: 256 ITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLG 315 ITQ N+ ++ K + NPD++R LG + + IG LGL KDW +II+ +GNYGE+F+RN+G Sbjct: 181 ITQANVEEMKK-SDNPDIKRLLGAEADTKIGTDLGLDKDWVVKIIKGVGNYGEIFERNIG 239 Query: 316 NQSELKIPRGYNALWSKGGLMYAPPIR 342 + S LKI RG NA W+KGGL Y P+R Sbjct: 240 SGSPLKIARGLNAQWNKGGLQYGIPVR 266 >gi|110678761|ref|YP_681768.1| glutamate/glutamine/aspartate/asparagine-binding protein [Roseobacter denitrificans OCh 114] gi|109454877|gb|ABG31082.1| glutamate/glutamine/aspartate/asparagine-binding protein [Roseobacter denitrificans OCh 114] Length = 338 Score = 325 bits (834), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 150/316 (47%), Positives = 214/316 (67%), Gaps = 2/316 (0%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L D+K RG L CG+ TGLVGFA A+G+W GFDV CRA+++A+ D + ++++P K Sbjct: 25 LDDVKARGTLNCGVTTGLVGFAAPNADGEWNGFDVAVCRAVAAAVLGDATAVEFVPTTGK 84 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 RF AL S +ID+L+RNT WT R++ L F I Y+DGQGF++ K G++S +L GA Sbjct: 85 TRFTALASGEIDMLARNTTWTFSRDVDLKFTFVGINYYDGQGFMVPKSLGVTSAKELDGA 144 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 ++C+Q GTTTEL LAD+F+A+N+ Y P+ E E Y A CD YT D S L A + Sbjct: 145 TVCIQTGTTTELNLADFFRANNISYEPVPIETNAEGQQQYLAGACDTYTTDASGLAATRA 204 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 + + PS+HV+LP+IISK PL P + GD EW ++V WT A++TAEELG+T N+++++ Sbjct: 205 SFENPSDHVLLPEIISKEPLGPLVRHGDDEWGDVVRWTLNALITAEELGVTSANVSEMAT 264 Query: 267 DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGY 326 + NP+V+R LG + + +GE LGL DW R I GNYGE+F +N+G + + + RG Sbjct: 265 GSNNPEVKRLLGTEGT--LGEMLGLDADWAMRAIASQGNYGEIFAKNIGEDTPIALSRGL 322 Query: 327 NALWSKGGLMYAPPIR 342 NA W+ GGL+Y+PP R Sbjct: 323 NAQWTNGGLIYSPPFR 338 >gi|293602358|ref|ZP_06684804.1| ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] gi|292819120|gb|EFF78155.1| ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] Length = 358 Score = 325 bits (833), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 145/314 (46%), Positives = 218/314 (69%), Gaps = 4/314 (1%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 +++RG + CG TG GF+ A G W+G DVD CRA+++A+F D +KI+ +PLN+++RF Sbjct: 48 VRQRGAVACGTTTGFAGFSAPDAQGKWQGLDVDLCRAIAAAVFGDANKIKVVPLNSQQRF 107 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 ALQS ++D+L+RNT T R+ +LG+ I ++DGQGF++ K G+ S +++GA+IC Sbjct: 108 TALQSGEVDVLTRNTTVTQQRDTALGIIHAGINFYDGQGFLVPKSLGVKSAKEINGATIC 167 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN- 208 +Q GT+ E TLAD+ +A+N+ Y P+V E E+ A+ A RCD ++ D S L +++++ Sbjct: 168 LQTGTSNENTLADWARANNVTYKPVVIETFNEVVNAFAAGRCDVFSTDASGLASIRISKL 227 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 P ++V+LP+IISK PL P + QGD +W NIV W+ AM+ AEE G+T KN+++ ++ Sbjct: 228 QNPDDYVVLPEIISKEPLGPFVRQGDDKWLNIVRWSLSAMIEAEEYGVTSKNVDE-QLNS 286 Query: 269 TNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNA 328 NP+++R LG+ G LGL + W Y I++ +GNYGE FDRN+G S LKI RG NA Sbjct: 287 ANPNIKRILGVTPGG--GANLGLDEKWAYNIVKQVGNYGESFDRNVGEGSPLKIKRGLNA 344 Query: 329 LWSKGGLMYAPPIR 342 W++GGLMYA PIR Sbjct: 345 QWTQGGLMYALPIR 358 >gi|323136410|ref|ZP_08071492.1| extracellular solute-binding protein family 3 [Methylocystis sp. ATCC 49242] gi|322398484|gb|EFY01004.1| extracellular solute-binding protein family 3 [Methylocystis sp. ATCC 49242] Length = 345 Score = 325 bits (833), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 152/316 (48%), Positives = 209/316 (66%), Gaps = 4/316 (1%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L +I KRGF+ CG+ T GFAE +W+GFDVD CRAL+SAIFDDP+K+ Y L AK Sbjct: 34 LSEILKRGFVICGM-TEADGFAEPLDGNEWRGFDVDICRALASAIFDDPTKVMYSALPAK 92 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 ER +LQ +D+L+ WT R+ + + ++ +DGQ F++ +++ +S LSG Sbjct: 93 ERAASLQGNWVDLLASGAPWTQSRDTGQRIIYAGVSLYDGQTFLVRRQRSFASARDLSGV 152 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 S+CVQ GT+ ELTLAD+F Y P FE EE A Y A +CDA T D S LYA + Sbjct: 153 SVCVQRGTSYELTLADFFNVRKAPYEPRAFETFEEAAAGYEAGKCDALTADASMLYAARA 212 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 P++H +LPD++SK+P P + QGD +W NIV WT YAM+ AEEL ++ N + K Sbjct: 213 KFASPADHAVLPDMLSKAPRGPVVRQGDDQWLNIVRWTLYAMINAEELQVSILNADLALK 272 Query: 267 DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGY 326 + NPD++R +G+D ++G LGL K+W +RII+H+GNYG+MFDRNLG + + + R Sbjct: 273 -SENPDIRRLVGVD--GDLGAGLGLAKNWAFRIIKHIGNYGDMFDRNLGPATPMAMDRRI 329 Query: 327 NALWSKGGLMYAPPIR 342 NALWS GGLMYAPP+R Sbjct: 330 NALWSNGGLMYAPPVR 345 >gi|163739481|ref|ZP_02146891.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Phaeobacter gallaeciensis BS107] gi|161387234|gb|EDQ11593.1| glutamate/glutamine/aspartate/asparagine-binding protein BztA precursor [Phaeobacter gallaeciensis BS107] Length = 338 Score = 325 bits (833), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 152/316 (48%), Positives = 213/316 (67%), Gaps = 2/316 (0%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L D+K RG L CG+ TGLVGFA ANG+W+GFDV CRA+++A+ D + ++++P K Sbjct: 25 LDDVKARGKLNCGVTTGLVGFAAPNANGEWEGFDVAVCRAVAAAVLGDSTAVEFVPTTGK 84 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 RF AL S +ID+L+RNT WT R++ L F + Y+DGQGF++ K+ G+SS +L GA Sbjct: 85 TRFTALASGEIDMLARNTTWTFSRDVDLKFEFVGVNYYDGQGFMVPKELGVSSAKELDGA 144 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 ++C+Q GTTTEL LAD+F+++N+ Y P+ E E Y A CD YT D S L A + Sbjct: 145 TVCIQTGTTTELNLADFFRSNNISYEPVPIETNAEAQQQYLAGACDVYTTDASGLAATRA 204 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 T D PS HV+LP+IISK PL P + GD EW ++V W+ A+V AEELG+T NI +++ Sbjct: 205 TFDDPSAHVLLPEIISKEPLGPLVRHGDHEWGDVVRWSLNALVAAEELGVTSANIGEMAA 264 Query: 267 DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGY 326 T NP++ R LG + + +GE LGL+ DW I GNYGE+F +N+G + + + RG Sbjct: 265 GTENPEINRLLGTEGT--LGEMLGLSADWAKNAIGAGGNYGEVFAKNIGEDTPIGLARGL 322 Query: 327 NALWSKGGLMYAPPIR 342 NA W++GGL+YAPP R Sbjct: 323 NAQWTEGGLLYAPPFR 338 >gi|163740274|ref|ZP_02147668.1| predicted amino-acid transporter subunit [Phaeobacter gallaeciensis 2.10] gi|161386132|gb|EDQ10507.1| predicted amino-acid transporter subunit [Phaeobacter gallaeciensis 2.10] Length = 338 Score = 325 bits (833), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 152/316 (48%), Positives = 213/316 (67%), Gaps = 2/316 (0%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L D+K RG L CG+ TGLVGFA ANG+W+GFDV CRA+++A+ D + ++++P K Sbjct: 25 LDDVKARGKLNCGVTTGLVGFAAPNANGEWEGFDVAVCRAVAAAVLGDSTAVEFVPTTGK 84 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 RF AL S +ID+L+RNT WT R++ L F + Y+DGQGF++ K+ G+SS +L GA Sbjct: 85 TRFTALASGEIDMLARNTTWTFSRDVDLKFEFVGVNYYDGQGFMVPKELGVSSAKELDGA 144 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 ++C+Q GTTTEL LAD+F+++N+ Y P+ E E Y A CD YT D S L A + Sbjct: 145 TVCIQTGTTTELNLADFFRSNNISYEPVPIETNAEAQQQYLAGACDVYTTDASGLAATRA 204 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 T D PS HV+LP+IISK PL P + GD EW ++V W+ A+V AEELG+T NI +++ Sbjct: 205 TFDDPSAHVLLPEIISKEPLGPLVRHGDHEWGDVVRWSLNALVAAEELGVTSANIGEMAA 264 Query: 267 DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGY 326 T NP++ R LG + + +GE LGL+ DW I GNYGE+F +N+G + + + RG Sbjct: 265 GTENPEINRLLGTEGT--LGEMLGLSADWAKNAIGAGGNYGEVFAKNIGEDTPIGLARGL 322 Query: 327 NALWSKGGLMYAPPIR 342 NA W++GGL+YAPP R Sbjct: 323 NAQWTEGGLLYAPPFR 338 >gi|159042874|ref|YP_001531668.1| glutamate/glutamine/aspartate/asparagine ABC transporter [Dinoroseobacter shibae DFL 12] gi|157910634|gb|ABV92067.1| glutamate/glutamine/aspartate/asparagine ABC transporter [Dinoroseobacter shibae DFL 12] Length = 338 Score = 325 bits (833), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 148/314 (47%), Positives = 215/314 (68%), Gaps = 2/314 (0%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 +++ RG + CGI+TGLVGFA ANG+W+GFDV CRA+++A+F DP+ + + P+ + R Sbjct: 27 EVQARGAVNCGISTGLVGFASQDANGEWQGFDVAVCRAVAAAVFGDPTAVNFNPVTNQVR 86 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 F L S +ID+L+RNT WT R++ L L F I Y+DGQGF++ K G+SS ++L GA++ Sbjct: 87 FEVLNSGEIDMLARNTTWTFSRDVDLKLEFTGINYYDGQGFMVPKALGVSSATELDGATV 146 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 C+Q GTTTEL LAD+F+A+N+ + P+ E Y A CD YT D S L A + + Sbjct: 147 CIQKGTTTELNLADFFRANNISFEPVPISTASEAQQQYLAGACDVYTTDASGLAATRASF 206 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 + P EHV+LP+IISK PL P + GD EW +IV WT A++ AEELG+T N+ +++ T Sbjct: 207 ESPDEHVVLPEIISKEPLGPLVRHGDNEWGDIVRWTLNALIAAEELGVTSANVAELAAGT 266 Query: 269 TNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNA 328 NP++ R LG + N+GE LGL+ DW +I+ GNYGE+F+ ++G + + + RG NA Sbjct: 267 DNPEINRLLGTE--GNLGEQLGLSADWAVNVIKAGGNYGEIFETHIGENTPIGLARGLNA 324 Query: 329 LWSKGGLMYAPPIR 342 W++GGL+YAPP R Sbjct: 325 QWTEGGLLYAPPFR 338 >gi|330814052|ref|YP_004358291.1| glutamate Aspartate periplasmic binding protein precursor GltI [Candidatus Pelagibacter sp. IMCC9063] gi|327487147|gb|AEA81552.1| glutamate Aspartate periplasmic binding protein precursor GltI [Candidatus Pelagibacter sp. IMCC9063] Length = 343 Score = 325 bits (833), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 149/341 (43%), Positives = 222/341 (65%), Gaps = 6/341 (1%) Query: 5 FFVSILCLIILFF--TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 F VSI +++L + S L K +GF+KCG++ GL GF+ A+G+W G DVD Sbjct: 6 FAVSIFAVLLLAACGNESAKKTSTLDTTKSQGFVKCGVSQGLPGFSNADASGNWAGMDVD 65 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 CRA+++A+ D +K++Y PL+AKERF ALQ+ ID+LSRNT WTL R+ ++GL F + Sbjct: 66 VCRAVAAAVLGDATKVKYTPLSAKERFTALQAGDIDVLSRNTTWTLERDAAIGLEFVGVN 125 Query: 123 YFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 ++DGQGF++ KK GI SV +G +C GTTTEL +AD+FKA + Y P+VFE+ +E Sbjct: 126 FYDGQGFMVRKKSGIKSVKDFQNGTKVCTNTGTTTELNMADFFKAAGVSYEPVVFEKADE 185 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + AY + RCD YT D S L + + P +H++LP+ ISK PL P + +GD W ++V Sbjct: 186 VVQAYDSGRCDTYTTDKSGLASQRTKLTAPDDHIVLPETISKEPLGPVVREGDATWADVV 245 Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301 W+ + AEE G+ +NI+ + D+ NP +QR +G + + N G AL L + W+Y +I+ Sbjct: 246 RWSLNVWIEAEEYGVNSENIDSM-MDSKNPAIQRIVGAEGTKN-GAALNLDQKWSYNLIK 303 Query: 302 HMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNY E + RNL + + + RG NALW+ GG++Y PP+R Sbjct: 304 QVGNYAESYKRNLAD-TGIMPDRGPNALWTNGGILYVPPVR 343 >gi|254477415|ref|ZP_05090801.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Ruegeria sp. R11] gi|214031658|gb|EEB72493.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Ruegeria sp. R11] Length = 338 Score = 325 bits (832), Expect = 7e-87, Method: Compositional matrix adjust. Identities = 151/316 (47%), Positives = 213/316 (67%), Gaps = 2/316 (0%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L D+K RG L CG+ TGLVGFA ANG+W+GFDV CRA+++A+ D + ++++P K Sbjct: 25 LDDVKARGKLNCGVTTGLVGFAAPNANGEWEGFDVAVCRAVAAAVLGDSTAVEFVPTTGK 84 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 RF AL S +ID+L+RNT WT R++ L F I Y+DGQGF++ K G+SS +L GA Sbjct: 85 TRFTALASGEIDMLARNTTWTFSRDVDLKFEFVGINYYDGQGFMVPKDLGVSSAKELDGA 144 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 ++C+Q GTTTEL LAD+F+++N+ Y P+ E E Y A CD YT D S L A + Sbjct: 145 TVCIQTGTTTELNLADFFRSNNISYEPVPIETNAEAQQQYLAGACDVYTTDASGLAATRA 204 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 T D P+ HV+LP+IISK PL P + GD EW ++V W+ A++ AEELG+T NIN+++ Sbjct: 205 TFDDPAGHVLLPEIISKEPLGPLVRHGDHEWGDVVRWSLNALIAAEELGVTSANINEMAA 264 Query: 267 DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGY 326 T NP++ R LG + + +GE LGL+ DW + GNYGE+F +N+G + + + RG Sbjct: 265 GTENPEINRLLGTEGT--LGEMLGLSADWAKNAVAAGGNYGEVFAKNIGEDTPIGLARGL 322 Query: 327 NALWSKGGLMYAPPIR 342 NA W++GGL+YAPP R Sbjct: 323 NAQWTEGGLLYAPPFR 338 >gi|311109014|ref|YP_003981867.1| general L-amino acid-binding periplasmic protein AapJ 3 [Achromobacter xylosoxidans A8] gi|310763703|gb|ADP19152.1| general L-amino acid-binding periplasmic protein AapJ 3 [Achromobacter xylosoxidans A8] Length = 338 Score = 325 bits (832), Expect = 9e-87, Method: Compositional matrix adjust. Identities = 150/329 (45%), Positives = 225/329 (68%), Gaps = 4/329 (1%) Query: 15 LFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 L +S + +A + +K +GF++CG++TG+ GF+ + G W G DVD CRAL+ +F Sbjct: 13 LLISSLTAHAGATFEAVKSKGFVQCGVSTGVAGFSVNDSKGGWIGLDVDLCRALAITMFG 72 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 D SK + + ++A +RF ALQS ++D+L RNT +L R+ +LGL + Y+D QG +++K Sbjct: 73 DASKAKIMAVSALQRFTALQSGEVDVLPRNTTLSLTRDTTLGLIGVAVNYYDSQGIMVNK 132 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 + S +L GA++CVQ GTTTEL LAD+F++ N+ + P+V ER++EI A+ RCDA Sbjct: 133 SLNVKSAKELDGATVCVQPGTTTELNLADWFRSQNIVFKPVVVERLDEIIRAFAVGRCDA 192 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 +TGD S L A + + P ++ ILP+ SK PL P + QGD +W+N+V WT +AM+ AEE Sbjct: 193 FTGDKSQLAAARSNLENPEKYDILPENFSKEPLGPMVRQGDEQWFNVVRWTLFAMLEAEE 252 Query: 254 LGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRN 313 GIT KN++++ K +TNP+VQR LG+ + +G+ LG+ W Y II+++GNYGE F++N Sbjct: 253 YGITSKNVDEMLK-STNPNVQRLLGV--TPGMGKNLGVDDKWAYNIIKNIGNYGESFEKN 309 Query: 314 LGNQSELKIPRGYNALWSKGGLMYAPPIR 342 LG S LK+PRG NA + GGLMY P+R Sbjct: 310 LGPSSPLKLPRGLNASYRDGGLMYGWPVR 338 >gi|254462559|ref|ZP_05075975.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Rhodobacterales bacterium HTCC2083] gi|206679148|gb|EDZ43635.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Rhodobacteraceae bacterium HTCC2083] Length = 347 Score = 324 bits (831), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 148/317 (46%), Positives = 207/317 (65%), Gaps = 3/317 (0%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L D+K RG L CG+ TGLVGFA ANG+W+GFDV CRA+++A DPS ++++P K Sbjct: 33 LDDVKARGKLNCGVTTGLVGFAAPDANGEWQGFDVGVCRAVAAAALGDPSAVEFVPTTGK 92 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 RF AL S +ID+L+RNT WT R++ L F + Y+DGQGF++ K G+SS +L GA Sbjct: 93 TRFTALASGEIDMLARNTTWTFSRDVDLKFEFVGVNYYDGQGFMVPKALGVSSAKELDGA 152 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 ++C+Q GTTTEL LADYF+ +N+ Y P+ E E Y CD YT D S L A + Sbjct: 153 TVCIQTGTTTELNLADYFRTNNISYEPVPIETNAEAQPLYLEGACDVYTTDASGLAATRA 212 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 + P +HV+LP+IISK PL P + GD+EW ++V W+ A++ AEELG+T NI ++ Sbjct: 213 AFENPGDHVVLPEIISKEPLGPLVRHGDSEWGDVVRWSLNALIAAEELGVTSANIADMAA 272 Query: 267 DT-TNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRG 325 NP++ R LG + + +GE LGL DW + I GNYGE+F++N+G + + + RG Sbjct: 273 AAGDNPEINRLLGTEGT--LGEMLGLDADWAKKAIMAGGNYGEIFEKNIGENTPIGLGRG 330 Query: 326 YNALWSKGGLMYAPPIR 342 NA W+ GGL+Y PP R Sbjct: 331 LNAQWTDGGLLYVPPFR 347 >gi|260432480|ref|ZP_05786451.1| glutamate/glutamine/aspartate/asparagine-binding protein bztAprecursor [Silicibacter lacuscaerulensis ITI-1157] gi|260416308|gb|EEX09567.1| glutamate/glutamine/aspartate/asparagine-binding protein bztAprecursor [Silicibacter lacuscaerulensis ITI-1157] Length = 356 Score = 324 bits (830), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 149/314 (47%), Positives = 213/314 (67%), Gaps = 2/314 (0%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 D+K RG L CG+ TGLVGFA ANG+W+GFDV CRA+++A+ D + ++++P K R Sbjct: 45 DVKARGKLNCGVTTGLVGFAAPDANGEWQGFDVAVCRAVAAAVLGDANAVEFVPTTGKTR 104 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 F AL S ++D+L+RNT WT R++ L F + Y+DGQGF++ K G+SS +L GA++ Sbjct: 105 FTALASGEVDMLARNTTWTFSRDVDLKFDFVGVNYYDGQGFMVPKALGVSSAKELDGATV 164 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 C+Q GTTTEL LAD+F+++N+ Y P+ E E Y A CD YT D S L A + T Sbjct: 165 CIQTGTTTELNLADFFRSNNISYEPVPIETNAEAQQQYLAGACDVYTTDASGLAATRATF 224 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 + P +HV+LP+IISK PL P + GD EW ++V WT A++TAEELGIT NI++++ T Sbjct: 225 ENPGDHVLLPEIISKEPLGPLVRHGDNEWGDVVRWTLNALITAEELGITSANIDEMASGT 284 Query: 269 TNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNA 328 NP++ R LG + + +GE LGL W R I+ GNYGE+F +N+G ++ + + RG NA Sbjct: 285 ENPEINRLLGSEGT--LGEMLGLDAQWALRAIKAGGNYGEVFAKNIGEETPIGLARGLNA 342 Query: 329 LWSKGGLMYAPPIR 342 W+ GGL+Y+PP R Sbjct: 343 QWTDGGLLYSPPFR 356 >gi|317403931|gb|EFV84400.1| L-amino acid ABC transporter [Achromobacter xylosoxidans C54] Length = 338 Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 146/325 (44%), Positives = 218/325 (67%), Gaps = 3/325 (0%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 T + L +KKRG+++CG++TG+ GF+ + G+W+G DVD CRA+++ IF+D SK Sbjct: 17 TGLAHAGPTLDTVKKRGYVQCGVSTGIQGFSSPDSKGNWQGLDVDMCRAIAATIFNDASK 76 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 + PL + RF ALQS ++D+L+RN T+ R+ +LGL + Y+D QG ++ + G+ Sbjct: 77 FRLTPLTTQARFTALQSGEVDVLTRNVTPTMARDTTLGLISTGVNYYDSQGVMVSARLGV 136 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + +L GA+ICVQ GT TEL LAD+F+A+ +K+ P+V ++ +EI A+ A RCDA+T D Sbjct: 137 RKLKELDGATICVQPGTVTELDLADWFRANGLKFKPVVIDKYDEIVRAFSAGRCDAFTSD 196 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 S L A + T + P +VIL + I+KSPL P + QGD W+N+V WT AM+ AEE G+T Sbjct: 197 KSQLAASRTTLEHPDNYVILDENIAKSPLGPMVRQGDDNWFNVVRWTLNAMLEAEEFGVT 256 Query: 258 QKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQ 317 N++ K +TNP+VQR LG+ + +G+ LG+ W Y I++ +GNYGE ++RNLG Sbjct: 257 SANVDSQLK-STNPNVQRILGV--TPGMGKNLGVDDKWAYNIVKQVGNYGESYERNLGMA 313 Query: 318 SELKIPRGYNALWSKGGLMYAPPIR 342 S +K+PRG NA W GG MY P+R Sbjct: 314 SAMKLPRGLNAQWRDGGQMYGWPVR 338 >gi|311108222|ref|YP_003981075.1| general L-amino acid-binding periplasmic protein AapJ 1 [Achromobacter xylosoxidans A8] gi|310762911|gb|ADP18360.1| general L-amino acid-binding periplasmic protein AapJ 1 [Achromobacter xylosoxidans A8] Length = 340 Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 145/317 (45%), Positives = 222/317 (70%), Gaps = 4/317 (1%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L +KK+GF++CG+ G+ GF+ + G+W+G DVD CRA+++A+F DP+K + PL+ + Sbjct: 27 LDAVKKKGFVQCGLTDGVSGFSATNSKGEWEGMDVDICRAVAAAVFGDPTKFKGTPLSTQ 86 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 +RF ALQS ++D+L R T R+ SLGLA +++DGQG +++KK G+ S +L+GA Sbjct: 87 QRFTALQSGEVDVLLRTVTLTQTRDTSLGLAAVAASFYDGQGILVNKKLGVKSAKELNGA 146 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 ++CVQ GTTTEL LAD+F+ +N+++ P+V ++V E+ A+ + RCDA+T D S L A++ Sbjct: 147 TVCVQPGTTTELNLADWFRTNNIEFKPVVIDKVTEVVRAFESGRCDAFTDDSSQLAAVRA 206 Query: 207 TN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 T +P ++ ILP+ SK PL P + QGD W IV WT +A++ AEE GITQKN++++ Sbjct: 207 TQVAKPDDYEILPERFSKEPLGPMVRQGDENWLGIVRWTLFALMEAEEYGITQKNVDEML 266 Query: 266 KDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRG 325 K + NP++ R LG+ + G+ +GL + W Y I+ +GNY E+F+RN+G S+L + RG Sbjct: 267 K-SNNPNIARILGV--TPGAGKNMGLDEKWAYNAIKAVGNYSEVFERNVGKDSKLGLQRG 323 Query: 326 YNALWSKGGLMYAPPIR 342 NALW+KGG MY PIR Sbjct: 324 TNALWNKGGAMYPWPIR 340 >gi|254456453|ref|ZP_05069882.1| ABC transporter [Candidatus Pelagibacter sp. HTCC7211] gi|207083455|gb|EDZ60881.1| ABC transporter [Candidatus Pelagibacter sp. HTCC7211] Length = 346 Score = 323 bits (828), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 153/348 (43%), Positives = 223/348 (64%), Gaps = 12/348 (3%) Query: 2 YKDFFVSILCLIILFFTSFSTN------ASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 Y S++ ++ + FT F+T + L + +K+GF++CG++ GL GF+ A G+ Sbjct: 4 YLKQLTSLVAMVAVLFT-FTTETMAAKKSKTLKNTQKKGFVRCGVSQGLPGFSNADAAGN 62 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 W G DVD CRA+++A+ D +K+++ PL+AKERF AL S +IDILSRNT WTL R+ +G Sbjct: 63 WTGVDVDVCRAVAAAVLGDANKVKFTPLSAKERFTALTSNEIDILSRNTTWTLSRDADIG 122 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPI 174 L F + ++DGQGF++ K G SSV+ +G S C GTTTEL + D+F + + Y P+ Sbjct: 123 LTFVGVNFYDGQGFMVRKNSGYSSVNDFKNGISACTNLGTTTELNMRDFFNSKGISYEPV 182 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 FE+ +E+ AAY A RCD YT D S L A ++ P +HV+LP+ ISK PL P + QGD Sbjct: 183 TFEKADEVVAAYDAGRCDTYTTDKSGLAAQRIKLSSPDDHVVLPETISKEPLGPVVRQGD 242 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKD 294 + W +IV W+ M+ AEE G+ N + + K + NP V+R +G + +G ALGL D Sbjct: 243 SVWEDIVRWSLNVMIEAEEYGVNSANADSM-KTSDNPAVKRLVGAE--GELGAALGLDND 299 Query: 295 WTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 W+ RII+ +GNYGE + RN+ + L RG N LW+KGG++Y PP R Sbjct: 300 WSLRIIKQVGNYGESYKRNIADTGILP-DRGPNELWTKGGILYVPPAR 346 >gi|171058819|ref|YP_001791168.1| extracellular solute-binding protein [Leptothrix cholodnii SP-6] gi|170776264|gb|ACB34403.1| extracellular solute-binding protein family 3 [Leptothrix cholodnii SP-6] Length = 339 Score = 323 bits (828), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 144/317 (45%), Positives = 220/317 (69%), Gaps = 3/317 (0%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L IK+R + G++TG+ GF+ + G W G DVD RA+++A+ D K++++PL + Sbjct: 25 LDTIKQRDQILVGVSTGVAGFSAADSQGKWTGLDVDVGRAIAAAVLGDADKVKWVPLASP 84 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 +RF A+QS ++D+LSRNT +TL R+ SLGL + ++DGQGF++ K + S QL GA Sbjct: 85 QRFTAIQSGEVDVLSRNTTFTLTRDASLGLHQTAVVFYDGQGFMVPAKTKVKSAKQLKGA 144 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 ++CVQ+GTTTE L D+ +A+ + P+VF++++ +AAY + RC AYT D S L +++ Sbjct: 145 TVCVQSGTTTEKNLTDFSRANKLNLKPVVFDKLDAANAAYFSGRCQAYTTDASGLASIRS 204 Query: 207 TNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 + P +HVILP++ISK PL P + +GD EW+ IV W Y ++ AEE GITQ N++Q+ Sbjct: 205 KEAKDPKDHVILPELISKEPLGPLVRRGDDEWFAIVKWVVYGLIEAEESGITQANVDQLK 264 Query: 266 KDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRG 325 D+T+P VQR LG K+ + G+ LGL ++W R I+ +GNYGE+++RN+G ++ + +PRG Sbjct: 265 ADSTDPVVQRLLG--KTEDTGKLLGLDREWLARAIKAVGNYGEIYERNVGEKTPVGLPRG 322 Query: 326 YNALWSKGGLMYAPPIR 342 NALW+ GGL YA PIR Sbjct: 323 KNALWTNGGLQYAMPIR 339 >gi|317405707|gb|EFV86003.1| L-amino acid ABC transporter [Achromobacter xylosoxidans C54] Length = 338 Score = 323 bits (828), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 145/329 (44%), Positives = 223/329 (67%), Gaps = 4/329 (1%) Query: 15 LFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 L +S+ +A + +K +GF++CG++TG+ GF+ + G W G DVD CRAL+ +F Sbjct: 13 LLLSSWGASAGVTFESVKNKGFVQCGVSTGVAGFSVNDSKGGWMGLDVDLCRALAVTMFG 72 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 D SK + + ++A +RF ALQS ++D+L RNT +L R+ +LGL + Y+D QG +++K Sbjct: 73 DASKAKIMAVSAVQRFTALQSGEVDVLPRNTTLSLTRDTTLGLIGVGVNYYDSQGIMVNK 132 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 + S +L GA++CVQ GTTTEL L+D+F++ N+ + P+V ER++EI A+ RCDA Sbjct: 133 SLNVKSAKELDGATVCVQPGTTTELNLSDWFRSQNIAFKPVVVERLDEIIRAFAVGRCDA 192 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 +TGD S L A + + P ++ ILP+ SK PL P + QGD +W+N+V WT +AM+ AEE Sbjct: 193 FTGDKSQLAAARTNLENPEKYDILPENFSKEPLGPMVRQGDEQWFNVVRWTMFAMLEAEE 252 Query: 254 LGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRN 313 G+T KN++++ K +TNP+VQR LG+ + +G+ LG+ W Y +I+ +GNYGE F++N Sbjct: 253 YGVTSKNVDEMLK-STNPNVQRLLGV--TPGMGKNLGVDDKWAYNVIKQIGNYGESFEKN 309 Query: 314 LGNQSELKIPRGYNALWSKGGLMYAPPIR 342 LG S +K+ RG NA + GGLMY P+R Sbjct: 310 LGATSPMKLSRGLNASYRNGGLMYGWPVR 338 >gi|33591762|ref|NP_879406.1| amino acid-binding periplasmic protein [Bordetella pertussis Tohama I] gi|33599230|ref|NP_886790.1| amino acid-binding periplasmic protein [Bordetella bronchiseptica RB50] gi|33571405|emb|CAE44886.1| amino acid-binding periplasmic protein [Bordetella pertussis Tohama I] gi|33575276|emb|CAE30739.1| amino acid-binding periplasmic protein [Bordetella bronchiseptica RB50] Length = 338 Score = 323 bits (828), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 147/314 (46%), Positives = 217/314 (69%), Gaps = 4/314 (1%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 +KKRG + CG TG GF+ G W+G DVD CRA+++A+F D SKI+ +PLN+++RF Sbjct: 28 VKKRGTVVCGTTTGFAGFSAPDKQGTWRGLDVDLCRAVAAAVFGDASKIKVVPLNSQQRF 87 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 ALQS ++D+L+RNT T R+ +LG+ I ++DGQGF++ K G+ S +L+GA+IC Sbjct: 88 TALQSGEVDVLTRNTTVTQQRDTALGIIHAGINFYDGQGFMVPKSLGVKSAKELNGATIC 147 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN- 208 +Q GT+ E TLAD+ +A+ + Y P+V E E+ A+ + RCD ++ D S L +++++ Sbjct: 148 LQTGTSNENTLADWARANQVSYKPVVIETFNEVVNAFASGRCDVFSTDASGLASIRISRL 207 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 ++P ++V+LP+IISK PL P + QGD W NIV W+ AM+ AEE G+T N+++ K + Sbjct: 208 EKPDDYVVLPEIISKEPLGPFVRQGDDAWLNIVRWSLSAMIEAEEYGVTTANVDEQLK-S 266 Query: 269 TNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNA 328 NP+V+R LG+ + G LGL + W Y II+ +GNYGE F+RN+G S LKI RG NA Sbjct: 267 ENPNVRRILGV--TPGAGANLGLDEKWAYNIIKQVGNYGESFERNVGQGSPLKIQRGLNA 324 Query: 329 LWSKGGLMYAPPIR 342 W++GGLMYA PIR Sbjct: 325 QWTQGGLMYALPIR 338 >gi|71083646|ref|YP_266366.1| ABC transporter [Candidatus Pelagibacter ubique HTCC1062] gi|71062759|gb|AAZ21762.1| ABC transporter [Candidatus Pelagibacter ubique HTCC1062] Length = 346 Score = 322 bits (826), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 152/348 (43%), Positives = 220/348 (63%), Gaps = 12/348 (3%) Query: 2 YKDFFVSILCLIILFFTSFSTN------ASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 Y S++ ++ + FT F+T + L + +K+GF++CG++ GL GF+ A G+ Sbjct: 4 YVKQLTSLVAMVAVLFT-FTTETMAAKKSKTLKNTQKKGFVRCGVSQGLPGFSNADAAGN 62 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 W G DVD CRA+++A+ D +K+++ PL+AKERF AL S +IDILSRNT WTL R+ +G Sbjct: 63 WTGVDVDVCRAVAAAVLGDANKVKFTPLSAKERFTALTSGEIDILSRNTTWTLSRDADIG 122 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPI 174 L F + ++DGQGF++ K GI+S SQ +G S C GTTTEL + D+F + + Y P+ Sbjct: 123 LTFVGVNFYDGQGFMVRKDSGITSTSQFKNGISACTNIGTTTELNMRDFFNSKGISYEPV 182 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 FE+ +E+ AAY + RCD YT D S L A + P +HV+LP+ ISK PL P + QGD Sbjct: 183 AFEKADEVVAAYDSGRCDTYTTDKSGLAAQRTKMTNPDDHVVLPETISKEPLGPVVRQGD 242 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKD 294 W +IV W+ M+ AEE GI N + + K + NP ++R +G +G A GL D Sbjct: 243 AVWEDIVRWSLNVMIEAEEYGINSANADMM-KTSENPQIKRLVG--SEGELGAAFGLDND 299 Query: 295 WTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 W+ RII+ +GNYGE + RN+ + L RG N +W+KGGL+Y PP R Sbjct: 300 WSLRIIKQVGNYGESYKRNIADTGILP-DRGPNQIWTKGGLLYVPPAR 346 >gi|311109272|ref|YP_003982125.1| general L-amino acid-binding periplasmic protein AapJ 5 [Achromobacter xylosoxidans A8] gi|310763961|gb|ADP19410.1| general L-amino acid-binding periplasmic protein AapJ 5 [Achromobacter xylosoxidans A8] Length = 338 Score = 322 bits (825), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 143/314 (45%), Positives = 217/314 (69%), Gaps = 4/314 (1%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 +++RG + CG TG GF+ A G W+G DVD CRA+++A+F D +KI+ +PLN+++RF Sbjct: 28 VRQRGAVACGTTTGFAGFSAPDAQGKWQGLDVDLCRAIAAAVFGDANKIKVVPLNSQQRF 87 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 ALQS ++D+L+RNT T R+ +LG+ I ++DGQGF++ K G+ S +++GA+IC Sbjct: 88 TALQSGEVDVLTRNTTVTQQRDTALGIIHAGINFYDGQGFLVPKSLGVKSAKEINGATIC 147 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN- 208 +Q GT+ E TLAD+ +A+N+ Y P+V E E+ A+ A RCD ++ D S L +++++ Sbjct: 148 LQTGTSNENTLADWARANNVSYKPVVIETFNEVVNAFAAGRCDVFSTDASGLASIRISKL 207 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 P ++V+LP+IISK PL P + QGD W NIV W+ AM+ AEE G++ N+++ +K + Sbjct: 208 QNPDDYVVLPEIISKEPLGPFVRQGDDAWLNIVRWSLSAMIEAEEYGVSSANVDEQAK-S 266 Query: 269 TNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNA 328 NP+++R LG+ G LGL + W Y I++ +GNYGE F+RN+G S LKI RG NA Sbjct: 267 ANPNIKRILGVTPGG--GANLGLDEKWAYNIVKQVGNYGESFERNVGQGSPLKIKRGLNA 324 Query: 329 LWSKGGLMYAPPIR 342 W++GGLMYA PIR Sbjct: 325 QWTQGGLMYALPIR 338 >gi|149925439|ref|ZP_01913703.1| probable amino acid-binding protein [Limnobacter sp. MED105] gi|149825556|gb|EDM84764.1| probable amino acid-binding protein [Limnobacter sp. MED105] Length = 343 Score = 322 bits (824), Expect = 6e-86, Method: Compositional matrix adjust. Identities = 153/336 (45%), Positives = 232/336 (69%), Gaps = 7/336 (2%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 ++ CL++ + + +L I KR ++CG+++G+ GF+ + ++G W+G DV CRA+ Sbjct: 14 TLFCLLV---ANTAQAGPVLDAIYKRDAVRCGVSSGVAGFSALGSDGQWRGLDVAVCRAV 70 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 ++A+ D K+Q+ PL++++RF ALQ+ QIDILSRNT WTL R+ L F ITY+DGQ Sbjct: 71 AAAVLGDAQKVQFTPLSSQQRFAALQAGQIDILSRNTTWTLGRDAGLNAHFAAITYYDGQ 130 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 G +MHK+ G+ S +L GA ICVQ+GTT E L+ Y + + IV++ E A+ Sbjct: 131 GILMHKRFGVKSAKELKGAEICVQSGTTNEKNLSTYLGSQGITAKAIVYDNFEAAYKAFF 190 Query: 188 AHRCDAYTGDISALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + RC A++ D+SAL LK + RP ++V+LP++ SK PL PA+++GD E++ IV W + Sbjct: 191 SGRCQAFSTDVSALIGLKSSQSGRPDDYVVLPEVFSKEPLGPAVLRGDDEFFAIVKWVVF 250 Query: 247 AMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNY 306 AM+ AEELG+ + NI Q + +++NP VQR LG + N+G+ LGL +DW +I++ +GNY Sbjct: 251 AMIEAEELGVGKGNIEQ-ALNSSNPAVQRLLG--GAENLGKPLGLPRDWVVKILQQVGNY 307 Query: 307 GEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GE+F+ NLG QS LK+ RG NALW++GGLMYAPP+R Sbjct: 308 GEVFEENLGKQSPLKLERGLNALWTQGGLMYAPPLR 343 >gi|330938900|gb|EGH42413.1| extracellular solute-binding protein [Pseudomonas syringae pv. pisi str. 1704B] Length = 324 Score = 322 bits (824), Expect = 8e-86, Method: Compositional matrix adjust. Identities = 148/324 (45%), Positives = 212/324 (65%), Gaps = 2/324 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L + + L IKK+GF++CG++ GL GF+ + G G D Sbjct: 3 MLKSTLAVVTALAAFGVIGAANAGTTLDAIKKKGFIQCGVSDGLPGFSVPDSTGKITGID 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D CRA+++A+F D +K+++ LNAKERF ALQS +IDILSRNT WT R+ +GL F Sbjct: 63 ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDAGMGLVFTG 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DG GF+++ K G++S +L GA+IC+QAGTTTEL ++DYF+++ +KY PI F+ + Sbjct: 123 VTYYDGIGFLVNNKLGVNSAKELDGATICIQAGTTTELNVSDYFRSNGLKYTPITFDTSD 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + RCD T D S LYA + +P ++++LP++ISK PL P + +GD EW++I Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYIVLPEVISKEPLGPVVRKGDEEWFSI 242 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEE IT KN+ +K T NPDV R LG D G+ L L KDW +I+ Sbjct: 243 VRWTLFAMLNAEEAKITSKNVEAEAKSTKNPDVARMLGAD--GTYGQDLKLPKDWVVQIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPR 324 + +GNYGE+F+RNLG + LKI R Sbjct: 301 KQVGNYGEVFERNLGEGTPLKIKR 324 >gi|317405857|gb|EFV86140.1| extracellular solute-binding protein [Achromobacter xylosoxidans C54] Length = 340 Score = 322 bits (824), Expect = 8e-86, Method: Compositional matrix adjust. Identities = 144/317 (45%), Positives = 222/317 (70%), Gaps = 4/317 (1%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L +KK+G+++CG+ G+ GF+ + G+W+G DVD CRA+++A+F DP+K + L+ + Sbjct: 27 LDAVKKKGYVQCGLTDGVSGFSATNSKGEWEGMDVDICRAVAAAVFGDPTKFKGTALSTQ 86 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 +RF ALQS ++D+L R T R+ SLGL+ +++DGQG +++KK G+ S +L+GA Sbjct: 87 QRFTALQSGEVDVLLRTVTLTQTRDTSLGLSAVAASFYDGQGILVNKKLGVKSAKELNGA 146 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 ++CVQ GTTTEL LAD+F+A+N+++ P+V ++V E+ A+ + RCDA+T D S L A++ Sbjct: 147 TVCVQPGTTTELNLADWFRANNIEFKPVVIDKVTEVVRAFESGRCDAFTDDASQLAAVRA 206 Query: 207 TN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 T +P ++ ILP+ SK PL P + QGD W IV WT +A++ AEE GITQKN++++ Sbjct: 207 TQVAKPDDYEILPERFSKEPLGPMVRQGDENWLGIVRWTLFALLEAEEYGITQKNVDEML 266 Query: 266 KDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRG 325 K + NP++ R LG+ + G+ +GL + W Y I+ +GNY E+F+RN+G S+L + RG Sbjct: 267 K-SNNPNISRILGV--TPGAGKNMGLDEKWAYNAIKAVGNYSEVFERNVGKDSKLGLQRG 323 Query: 326 YNALWSKGGLMYAPPIR 342 NALWSKGG MY PIR Sbjct: 324 TNALWSKGGAMYPWPIR 340 >gi|99080135|ref|YP_612289.1| lysine-arginine-ornithine-binding periplasmic protein [Ruegeria sp. TM1040] gi|99036415|gb|ABF63027.1| Lysine-arginine-ornithine-binding periplasmic protein [Ruegeria sp. TM1040] Length = 338 Score = 321 bits (823), Expect = 9e-86, Method: Compositional matrix adjust. Identities = 151/316 (47%), Positives = 211/316 (66%), Gaps = 2/316 (0%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L D+K R L CG++TGLVGF+ ANG+W+GFD+ CRA+++A+ DPSK++Y+P K Sbjct: 25 LDDVKARDKLNCGVSTGLVGFSAPNANGEWEGFDIAVCRAVAAAVLGDPSKVEYVPTTGK 84 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 RF AL S +ID+L+RNT WT R++ L F + Y+DGQGF++ K+ G+SS +L GA Sbjct: 85 TRFTALASGEIDMLARNTTWTFSRDVDLKFEFVGVNYYDGQGFMVPKELGVSSAKELDGA 144 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 ++C+Q GTTTEL LAD+F+A+N+ Y P+ E E Y A CD YT D S L A + Sbjct: 145 TVCIQTGTTTELNLADFFRANNISYEPVPIETNAEARQQYLAGACDVYTTDASGLAATRA 204 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 T D + HVILP+IISK PL P + GD EW ++V WT AM+ AEELGIT N+ + + Sbjct: 205 TFDDAANHVILPEIISKEPLGPLVRHGDNEWGDVVRWTLNAMIAAEELGITSANLAEKAA 264 Query: 267 DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGY 326 T NP++ R LG + + +GE LGL D+ + + GNYGE+F + +G + + + RG Sbjct: 265 GTDNPEINRLLGTEGT--LGEMLGLEADFAQKALAAGGNYGEIFAKTIGEDTPVGLARGL 322 Query: 327 NALWSKGGLMYAPPIR 342 NA W+ GGL+YAPP R Sbjct: 323 NAQWTDGGLLYAPPFR 338 >gi|33594953|ref|NP_882596.1| amino acid-binding periplasmic protein [Bordetella parapertussis 12822] gi|33565029|emb|CAE39978.1| amino acid-binding periplasmic protein [Bordetella parapertussis] Length = 338 Score = 321 bits (823), Expect = 9e-86, Method: Compositional matrix adjust. Identities = 147/314 (46%), Positives = 216/314 (68%), Gaps = 4/314 (1%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 +KKRG + CG TG GF+ G W+G DVD CRA+++A+F D SKI+ +PLN+++RF Sbjct: 28 VKKRGTVVCGTTTGFAGFSAPDKQGTWRGLDVDLCRAVAAAVFGDASKIKVVPLNSQQRF 87 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 ALQS ++D+L+RNT T R+ +LG+ I ++DGQGF++ K G+ S +L+GA+IC Sbjct: 88 TALQSGEVDVLTRNTTVTQQRDTALGIIHAGINFYDGQGFMVPKSLGVKSAKELNGATIC 147 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN- 208 +Q GT+ E TLAD+ +A+ + Y P+V E E+ A+ + RCD ++ D S L +++++ Sbjct: 148 LQTGTSNENTLADWARANQVSYKPVVIETFNEVVNAFASGRCDVFSTDASGLASIRISRL 207 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 ++P ++V+LP+IISK PL P + QGD W NIV W+ AM+ AEE G+T N+++ K + Sbjct: 208 EKPDDYVVLPEIISKEPLGPFVRQGDDAWLNIVRWSLSAMIEAEEYGVTTANVDEQLK-S 266 Query: 269 TNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNA 328 NP+V+R LG+ + G LGL + W Y II+ +GNYGE F+RN+G S LKI RG NA Sbjct: 267 ENPNVRRILGVTPGA--GANLGLDEKWAYNIIKQVGNYGESFERNVGQGSPLKIQRGLNA 324 Query: 329 LWSKGGLMYAPPIR 342 W +GGLMYA PIR Sbjct: 325 QWIQGGLMYALPIR 338 >gi|291571845|dbj|BAI94117.1| putative ABC transporter substrate-binding protein [Arthrospira platensis NIES-39] Length = 343 Score = 321 bits (822), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 137/321 (42%), Positives = 215/321 (66%), Gaps = 2/321 (0%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 T S L +K RGFL CG++ G+ GF+ V +G++ G DVD C+A+++A+FDDP+ +QY Sbjct: 25 TGQSRLNVVKNRGFLICGVDGGIPGFSFVDESGEYSGLDVDVCKAVAAALFDDPNAVQYR 84 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 L++ ERF A++S ++D+LSRNT WTL R+ S+G+ F P T++DGQG ++ GI+++ Sbjct: 85 NLDSTERFEAMRSGEVDMLSRNTTWTLSRDTSVGMEFAPTTFYDGQGMMVRADSGITTLE 144 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 ++CV+AGTTTEL L D + + + + F++ + AAY RC+ T D S L Sbjct: 145 DFQDLAVCVEAGTTTELNLTDNMRERGITFETVTFQQADPAYAAYAEGRCEGMTSDKSQL 204 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 A + T P++H+IL +SK PL P + D+ W++ V W +A+ AEELGITQ N+ Sbjct: 205 LARRSTLPNPNDHIILDVTMSKEPLGPVTLNNDSAWFDTVKWVTFALFEAEELGITQANV 264 Query: 262 NQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELK 321 Q+++ + NP ++RFLG++ ++G +GLT D+ R+I+H+GNY E++DRNLG S+ Sbjct: 265 EQIAQTSENPTIRRFLGVE--GDLGTGMGLTNDFAARVIKHVGNYAEVYDRNLGTGSQFN 322 Query: 322 IPRGYNALWSKGGLMYAPPIR 342 +PR N LW+ GGL+++PP R Sbjct: 323 LPRNENELWTNGGLLFSPPFR 343 >gi|300865204|ref|ZP_07110022.1| extracellular solute-binding protein [Oscillatoria sp. PCC 6506] gi|300336795|emb|CBN55172.1| extracellular solute-binding protein [Oscillatoria sp. PCC 6506] Length = 354 Score = 320 bits (821), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 149/318 (46%), Positives = 210/318 (66%), Gaps = 2/318 (0%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L I RG L CG++ L GF+ V G + G DV+ CRA+++A+FDDP K++Y LN Sbjct: 39 SRLDKIISRGTLICGVSGQLPGFSFVDEKGKYSGLDVEICRAIAAALFDDPEKVEYRNLN 98 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 AKERF ALQS +IDILSRNT WTL R+ S GL F P+ ++D Q ++ K GI ++ + Sbjct: 99 AKERFTALQSGEIDILSRNTTWTLSRDGSTGLEFAPVVFYDSQSIMVKKDSGIQTLKDFA 158 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G SICVQ GT+TE L+D + +KY P+VFE V A Y+ RC T D S L + Sbjct: 159 GKSICVQTGTSTEQNLSDQMRKLGIKYTPVVFEDVNATFATYQEGRCQGVTADRSQLVSK 218 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 + P +H+IL +++SK PLAPA+ GD++W + V W YA + AE+LG+ +NI+Q+ Sbjct: 219 RTILPTPDQHIILNEVMSKEPLAPAVSSGDSKWADAVRWIVYATIEAEDLGVNSQNIDQL 278 Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324 + TT+P+V+R +G + ++G+ LGL D+ R I+ +GNYGE++DRNLG S LK+ R Sbjct: 279 ATTTTDPNVKRLIGTE--GDLGKGLGLPNDFALRTIKKVGNYGEIYDRNLGPSSTLKLDR 336 Query: 325 GYNALWSKGGLMYAPPIR 342 G N LW GGL+Y+PP R Sbjct: 337 GQNRLWKDGGLLYSPPFR 354 >gi|91763314|ref|ZP_01265278.1| ABC transporter [Candidatus Pelagibacter ubique HTCC1002] gi|91717727|gb|EAS84378.1| ABC transporter [Candidatus Pelagibacter ubique HTCC1002] Length = 346 Score = 320 bits (821), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 149/347 (42%), Positives = 218/347 (62%), Gaps = 10/347 (2%) Query: 2 YKDFFVSILCLIILFF-----TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 Y S++ ++ + F T + + L + +K+GF++CG++ GL GF+ A G+W Sbjct: 4 YVKQLTSLVAMVAVLFAFTTETMAAKKSKTLKNTQKKGFVRCGVSQGLPGFSNADAAGNW 63 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G DVD CRA+++A+ D +K+++ PL+AKERF AL S +IDILSRNT WTL R+ +GL Sbjct: 64 TGVDVDVCRAVAAAVLGDANKVKFTPLSAKERFTALTSGEIDILSRNTTWTLSRDADIGL 123 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F + ++DGQGF++ K GI+S SQ +G S C GTTTEL + D+F + + Y P+ Sbjct: 124 TFVGVNFYDGQGFMVRKDSGITSTSQFKNGISACTNIGTTTELNMRDFFNSKGISYEPVA 183 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 FE+ +E+ AAY + RCD YT D S L A + P +H++LP+ ISK PL P + QGD Sbjct: 184 FEKADEVVAAYDSGRCDTYTTDKSGLAAQRTKMTNPDDHIVLPETISKEPLGPVVRQGDA 243 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDW 295 W +IV W+ M+ AEE GI N + + K + NP ++R +G +G A GL DW Sbjct: 244 VWEDIVRWSLNVMIEAEEYGINSANADMM-KTSENPQIKRLVG--SEGELGAAFGLDNDW 300 Query: 296 TYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + RII+ +GNYGE + RN+ + L RG N +W+KGGL+Y PP R Sbjct: 301 SLRIIKQVGNYGESYKRNIADTGILP-DRGPNQIWTKGGLLYVPPAR 346 >gi|284052552|ref|ZP_06382762.1| extracellular solute-binding protein [Arthrospira platensis str. Paraca] Length = 355 Score = 320 bits (821), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 137/321 (42%), Positives = 215/321 (66%), Gaps = 2/321 (0%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 T S L +K RGFL CG++ G+ GF+ V +G++ G DVD C+A+++A+FDDP+ +QY Sbjct: 37 TGQSRLNVVKNRGFLICGVDGGIPGFSFVDESGEYSGLDVDVCKAVAAALFDDPNAVQYR 96 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 L++ ERF A++S ++D+LSRNT WTL R+ S+G+ F P T++DGQG ++ GI+++ Sbjct: 97 NLDSTERFEAMRSGEVDMLSRNTTWTLSRDTSVGMEFAPTTFYDGQGMMVRADSGITTLE 156 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 ++CV+AGTTTEL L D + + + + F++ + AAY RC+ T D S L Sbjct: 157 DFQDLAVCVEAGTTTELNLTDNMRERGITFETVTFQQADPAYAAYAEGRCEGMTSDKSQL 216 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 A + T P++H+IL +SK PL P + D+ W++ V W +A+ AEELGITQ N+ Sbjct: 217 LARRSTLPNPNDHIILDVTMSKEPLGPVTLNNDSAWFDTVKWVTFALFEAEELGITQANV 276 Query: 262 NQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELK 321 Q+++ + NP ++RFLG++ ++G +GLT D+ R+I+H+GNY E++DRNLG S+ Sbjct: 277 EQIAQTSENPTIRRFLGVE--GDLGTGMGLTNDFAARVIKHVGNYAEVYDRNLGTGSQFN 334 Query: 322 IPRGYNALWSKGGLMYAPPIR 342 +PR N LW+ GGL+++PP R Sbjct: 335 LPRNENELWTNGGLLFSPPFR 355 >gi|317122275|ref|YP_004102278.1| amino acid ABC transporter substrate-binding protein, PAAT family [Thermaerobacter marianensis DSM 12885] gi|315592255|gb|ADU51551.1| amino acid ABC transporter substrate-binding protein, PAAT family [Thermaerobacter marianensis DSM 12885] Length = 366 Score = 320 bits (821), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 140/313 (44%), Positives = 212/313 (67%), Gaps = 3/313 (0%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 + +RG L CG+N L GF+ + NG GFD DFCRA+++A+FDDP+ +++ PL+A+ERF Sbjct: 57 VLQRGKLICGVNGQLPGFSYLDPNGQMTGFDADFCRAIAAALFDDPNAVEFRPLSAQERF 116 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 A+QS ++D+L RNT WTL R+ G+ F P T++DG G ++ K + + +++ L GA+IC Sbjct: 117 TAVQSGEVDVLIRNTTWTLGRDTVNGMEFAPTTFYDGGGIMVRKDRNVKTLADLDGATIC 176 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V +GTT E+ L D +A + P FE +++ A Y + CDA T D S L + Sbjct: 177 VLSGTTNEMVLTDRMRALGASFTPKTFEDADQLYATYESGGCDAVTSDKSQLAGRRAVLS 236 Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 P HVIL +++SK PL PA+ D+ W+++V W YA + AEE GIT +N++Q K++ Sbjct: 237 DPDNHVILDEMLSKEPLGPAVKNNDSAWFDVVKWVVYATIQAEEFGITSQNVDQF-KNSD 295 Query: 270 NPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNAL 329 NPD++RFLG++ +G+ LG++ D+ YR+I+H+GNYGE++DRNLG + K+ RG N L Sbjct: 296 NPDIRRFLGVE--GELGQGLGISNDFAYRVIKHVGNYGEIYDRNLGPNTPFKLERGLNEL 353 Query: 330 WSKGGLMYAPPIR 342 W+ GGL+YAPP R Sbjct: 354 WTNGGLLYAPPFR 366 >gi|269102822|ref|ZP_06155519.1| amino acid ABC transporter amino acid-binding protein [Photobacterium damselae subsp. damselae CIP 102761] gi|268162720|gb|EEZ41216.1| amino acid ABC transporter amino acid-binding protein [Photobacterium damselae subsp. damselae CIP 102761] Length = 342 Score = 320 bits (820), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 146/333 (43%), Positives = 220/333 (66%), Gaps = 3/333 (0%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 L L+ L F+ S +S L +KKRG++KCG++TGL+GF+E G W GFDV+FCRA+++ Sbjct: 13 LVLVALLFSYASVASSTLETVKKRGYIKCGVSTGLLGFSEPNQKGIWHGFDVEFCRAVAA 72 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 A+ D +++++PL AKERF ALQ+ +D+L+RNT WTL R+ SL + F ++Y+DGQGF Sbjct: 73 AVLKDKGQVKFIPLTAKERFFALQNNDVDLLARNTSWTLHRDTSLNVLFTGVSYYDGQGF 132 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 ++ I+ +++LS IC Q GTTTEL L++YF + I F+ ++ A+ Sbjct: 133 LVKTSANINKITELSNPRICFQTGTTTELNLSEYFAQIKQPFQSIPFDAKPQLVTAFEDD 192 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 RCD + D + LY++K + P IL +ISK PL P + D++W+NIV WT + ++ Sbjct: 193 RCDVISSDKAGLYSIKQSLKDPLSAHILVSVISKEPLGPVVRDNDSQWFNIVKWTLFTLL 252 Query: 250 TAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEM 309 AEE I+ +NI+ + KD++ P + RFL N+ E L L DW Y+II+ +GNYG++ Sbjct: 253 NAEENRISSENIDDL-KDSSIPHIARFLST--KDNLSEGLQLPLDWRYQIIKQVGNYGQI 309 Query: 310 FDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++R LG+ S+LK+ RG NALW GG+ YAPPIR Sbjct: 310 YERTLGHSSKLKMERGLNALWIDGGIQYAPPIR 342 >gi|296448618|ref|ZP_06890487.1| extracellular solute-binding protein family 3 [Methylosinus trichosporium OB3b] gi|296253868|gb|EFH01026.1| extracellular solute-binding protein family 3 [Methylosinus trichosporium OB3b] Length = 351 Score = 320 bits (820), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 148/338 (43%), Positives = 210/338 (62%), Gaps = 3/338 (0%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F +L L + + A+ LG + +RG L CG+ G GFA G+W G DVDFC Sbjct: 17 MFALLLPLAPARASGLAVRAATLGQVTERGRLLCGVGAGQPGFARQDEKGEWSGLDVDFC 76 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 RA+++AIFDDPS+ + L KER ALQ+ ++D+L+ WTL R+ G+AF +F Sbjct: 77 RAVAAAIFDDPSRASIVALTPKERLKALQTGEVDLLAHGAAWTLARDAGQGVAFVATLFF 136 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 DGQGF+ +K+ S L+G SICVQ GT+ EL L D +A + P +F EE Sbjct: 137 DGQGFLTARKRAAQSRRDLAGLSICVQQGTSFELDLVDGRRASDKPVEPRLFPSFEEAAE 196 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 AY +CDA T D+S L A + + P H IL ++I K PL P + QGD +W+++V WT Sbjct: 197 AYAQGQCDALTADLSTLAAERARLEAPDRHAILAELIDKEPLGPIVRQGDAQWFDVVRWT 256 Query: 245 HYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMG 304 ++AM+ AEELG+ N+++ K + +P +R LG++ E GL DW YRI++H+G Sbjct: 257 YFAMLDAEELGVASTNVDEALK-SADPRTRRLLGVEGGRV--EGFGLEPDWAYRIVKHVG 313 Query: 305 NYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 NYGE+F+RNLG+ S L + R NALW++GGLMYAPP+R Sbjct: 314 NYGEVFERNLGHGSPLGLDRRLNALWTEGGLMYAPPVR 351 >gi|302383029|ref|YP_003818852.1| extracellular solute-binding protein family 3 [Brevundimonas subvibrioides ATCC 15264] gi|302193657|gb|ADL01229.1| extracellular solute-binding protein family 3 [Brevundimonas subvibrioides ATCC 15264] Length = 370 Score = 320 bits (819), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 143/315 (45%), Positives = 210/315 (66%), Gaps = 4/315 (1%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 IK+RG L CG+N GLVGFA G+W+GFDVDFCR L++A+ DP ++++PL+A+ RF Sbjct: 58 IKRRGRLNCGVNQGLVGFAYTDNRGEWRGFDVDFCRGLAAAVVGDPDAVRFVPLSAENRF 117 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 AL+ ++D+L RNT WT+ R+ L+F I Y+DGQGF++ + ++S ++L+GA IC Sbjct: 118 QALEDGRVDVLWRNTSWTMERDTGGRLSFAGINYYDGQGFLVRRALNLNSAAELNGARIC 177 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 +Q+G+T+ L + DYF++ ++Y +V E AY CDA++ D+SAL A + T Sbjct: 178 LQSGSTSALNVEDYFRSRGIEYRAVVLPTEEAARQAYGREDCDAFSADVSALAAARTTLG 237 Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 S+HVILPD+ISK PL P + +GD +W IV WT A+V AEELG+TQ N+ + + Sbjct: 238 DSSQHVILPDVISKEPLGPVVRRGDEQWTAIVRWTQNALVLAEELGVTQANVEDQAAEAR 297 Query: 270 NPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNAL 329 +P V+R LG++ G +GL+ DW I +GNYGE+F+RNLG+QS L + RG NA Sbjct: 298 DPQVRRLLGVE--GEFGSRMGLSDDWARDAIAGVGNYGEIFERNLGSQSALDLARGLNAQ 355 Query: 330 WS--KGGLMYAPPIR 342 W+ GL+Y P+R Sbjct: 356 WNGRPAGLIYGLPVR 370 >gi|224371700|ref|YP_002605864.1| amino acid-binding periplasmic amino acid binding protein [Desulfobacterium autotrophicum HRM2] gi|223694417|gb|ACN17700.1| amino acid-binding periplasmic amino acid binding protein [Desulfobacterium autotrophicum HRM2] Length = 332 Score = 319 bits (818), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 147/334 (44%), Positives = 220/334 (65%), Gaps = 5/334 (1%) Query: 12 LIILFFTSFSTN---ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 +I + +F A L D++ + L CGI+ G+ GF+ + G W GFDVD RA++ Sbjct: 1 MIFIMMGAFPCTGPWAGTLEDVRAKDVLTCGISEGIPGFSIPDSTGKWVGFDVDMARAVA 60 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 +A+ DP KI+++PL +K++ +A+ S Q+D+ SR T WTL R+ G+ F I ++DGQG Sbjct: 61 AAVLSDPQKIKFVPLASKQKIIAVSSGQVDLTSRTTTWTLKRDGKQGVDFTKIVFYDGQG 120 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 F++ K G+ S +++ GA++CV AGTT+EL LAD+ +A+ +K +VF+ +E AY Sbjct: 121 FMVKKALGVDSATKIDGATVCVTAGTTSELNLADFARANGLKIEALVFDGKKEALNAYAT 180 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 RCD +T D+S L +L+ T P++H I+P++ISK PLAP + GD +W +IV+W + Sbjct: 181 GRCDCFTTDVSQLASLRTTLPNPNDHEIMPEVISKEPLAPLVRHGDNQWKDIVTWVLNGL 240 Query: 249 VTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGE 308 V AEE GIT N+ ++ + + NP VQR LG KS + G +GL KDW R+I+ +GNYGE Sbjct: 241 VAAEEYGITSANVLEMKEKSENPVVQRMLG--KSGDTGSYIGLDKDWMVRVIQAVGNYGE 298 Query: 309 MFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++DR+ G + L IPRG N LW+KGGL YA PIR Sbjct: 299 IYDRHFGPATALNIPRGVNRLWTKGGLQYALPIR 332 >gi|293607066|ref|ZP_06689409.1| general amino acid ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] gi|292814556|gb|EFF73694.1| general amino acid ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] Length = 340 Score = 319 bits (818), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 145/317 (45%), Positives = 220/317 (69%), Gaps = 4/317 (1%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L +KK+GF++CG+ G+ GF+ + G+W+G DVD CRA+++A+F DPSK + L+ + Sbjct: 27 LDAVKKKGFVQCGLTDGVSGFSATNSKGEWEGMDVDICRAVAAAVFGDPSKFKGTALSTQ 86 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 +RF ALQS ++D+L R T R+ SLGL+ +++DGQG +++KK G+ S +L+GA Sbjct: 87 QRFTALQSGEVDVLLRTVTLTQTRDTSLGLSAVAASFYDGQGILVNKKLGVKSAKELNGA 146 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 ++CVQ GTTTEL LAD+F+A+ +++ P+V ++V E+ A+ + RCDA+T D S L A++ Sbjct: 147 TVCVQPGTTTELNLADWFRANKIEFKPVVIDKVTEVVRAFESGRCDAFTDDSSQLAAVRA 206 Query: 207 TN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 T +P ++ ILP+ SK PL P + QGD W IV WT +A++ AEE GITQKN++++ Sbjct: 207 TQVAKPDDYEILPERFSKEPLGPMVRQGDENWLGIVRWTLFALLEAEEYGITQKNVDEML 266 Query: 266 KDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRG 325 K + NP+V R LG+ + G+ +GL + W Y I+ +GNY E+F+RN+G S+L + RG Sbjct: 267 K-SNNPNVLRILGV--TPGAGKNMGLDEKWAYNAIKAVGNYSEVFERNVGKDSKLGLARG 323 Query: 326 YNALWSKGGLMYAPPIR 342 NALWS GG MY PIR Sbjct: 324 TNALWSNGGAMYPWPIR 340 >gi|330429782|gb|AEC21116.1| putative extracellular solute-binding protein [Pusillimonas sp. T7-7] Length = 338 Score = 319 bits (817), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 148/330 (44%), Positives = 221/330 (66%), Gaps = 5/330 (1%) Query: 15 LFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 + SFS +A L +K+RG + CG+ TG GF+ A G W+G DVD CRA+++A Sbjct: 12 VLAASFSAAHADTLDVVKERGVVHCGVTTGFAGFSAPDAKGVWQGLDVDLCRAVAAATLG 71 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 D K + +PL++++RF ALQS +ID+L+RNT T R+ +LG + ++DGQGF++ K Sbjct: 72 DAEKFKAVPLSSQQRFTALQSGEIDLLARNTTVTQQRDTALGAISAGVNFYDGQGFLVPK 131 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 G+SS +L GAS+C+Q GT+ E T+AD+ +A+N+ Y P+V E+ E+ A+ A RCD Sbjct: 132 SLGVSSAKELDGASVCMQTGTSNENTMADWARANNITYKPVVIEQFNEVVNAFAAGRCDV 191 Query: 194 YTGDISALYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 +T D S L +++++ P ++ +LP+IISK PL P + QGD W N+V W+ AM+ AE Sbjct: 192 FTTDASGLASIRISKLSNPDDYQVLPEIISKEPLGPFVRQGDDRWLNVVKWSLQAMIGAE 251 Query: 253 ELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDR 312 ELGIT N+++ K + NP+V+R LG+ + + G+ LG+ + W Y II+ +GNYGE FDR Sbjct: 252 ELGITSANVDEQLK-SENPNVKRLLGVTEGA--GKNLGVDEKWAYNIIKQVGNYGESFDR 308 Query: 313 NLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 N+G S L+I RG NA W+ GGLMY P+R Sbjct: 309 NVGKGSPLQIERGLNAQWTDGGLMYGLPVR 338 >gi|47114851|emb|CAE48356.1| unnamed protein product [Methylocystis sp. SC2] Length = 343 Score = 319 bits (817), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 145/316 (45%), Positives = 215/316 (68%), Gaps = 4/316 (1%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L I KRG+L CG++ GFA+ G+W+GFDVDFCRA++SA+ DDP+K +++ L+ K Sbjct: 32 LAQIMKRGYLTCGVSDA-PGFAQRDGAGEWRGFDVDFCRAVASAVLDDPNKARFVELSQK 90 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 ER ALQ+ +D+L + WT R+ S L + I DGQGF++ +++ +SV L GA Sbjct: 91 ERAGALQAGAVDLLVSASPWTQARDTSHRLIYAAIFLHDGQGFLVRRQRKTASVQDLDGA 150 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 SICV+ GT EL +AD+F+A KY P +F +E+ AY +CDA T D+S L+ +++ Sbjct: 151 SICVEQGTPYELAVADFFRARKEKYDPKLFPSLEDAAKAYDEEKCDALTADVSTLHGVRI 210 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 P++H +LPDI+SKSP P + QGD +W NIV WT +AM+ AEEL +++ N + + Sbjct: 211 GLTAPADHAVLPDILSKSPRGPLVRQGDDQWLNIVRWTLFAMIDAEELEVSKANAD-AAL 269 Query: 267 DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGY 326 + NP ++R LG+D + G+ LGL++DW YRI++H+GNY ++F+RNLG + + R Sbjct: 270 SSENPQIRRLLGVDGAH--GDDLGLSQDWAYRIVKHVGNYADVFERNLGRGAPYAMERRL 327 Query: 327 NALWSKGGLMYAPPIR 342 NALW+KGGLMYAPP+R Sbjct: 328 NALWNKGGLMYAPPVR 343 >gi|154253424|ref|YP_001414248.1| extracellular solute-binding protein [Parvibaculum lavamentivorans DS-1] gi|154157374|gb|ABS64591.1| extracellular solute-binding protein family 3 [Parvibaculum lavamentivorans DS-1] Length = 367 Score = 319 bits (817), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 155/313 (49%), Positives = 214/313 (68%), Gaps = 3/313 (0%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 +++RGF++CG++ GL GF+ G W G DVDFCRA+++AIF +P ++++ PL+AK+RF Sbjct: 58 VRQRGFIQCGVSQGLPGFSNPDERGRWSGIDVDFCRAIAAAIFGNPDQVRFRPLSAKDRF 117 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 ALQS +IDILSRNT WT+ R+ LG F +TY+DGQ F++ K GI + + L+GA+IC Sbjct: 118 TALQSGEIDILSRNTTWTMSRDTQLGFNFVGVTYYDGQSFMVRKAAGIKTTADLAGATIC 177 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 + GTTTEL LADYF++ + Y + FE+ +E AY RCDAYT D S LYA +L Sbjct: 178 TETGTTTELNLADYFRSRGLSYRVLSFEKNDEAIVAYDRGRCDAYTTDASGLYATRLKLA 237 Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 P + IL +IISK PL PA+ QGD +W +I WT A++ AEE GIT NIN++ ++ Sbjct: 238 DPDANTILSEIISKEPLGPAVRQGDPQWEDIARWTLNALLEAEEFGITSANINEM-LESD 296 Query: 270 NPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNAL 329 NP V+R LG + G ++GL +W IR +GNYGEMF+RN+G + L I RG NA Sbjct: 297 NPRVKRLLG--REGAYGGSVGLDANWAANAIRAVGNYGEMFERNVGKNTPLGIERGLNAQ 354 Query: 330 WSKGGLMYAPPIR 342 W+ GGL YAPP+R Sbjct: 355 WTDGGLQYAPPVR 367 >gi|222526721|ref|YP_002571192.1| extracellular solute-binding protein family 3 protein [Chloroflexus sp. Y-400-fl] gi|222450600|gb|ACM54866.1| extracellular solute-binding protein family 3 [Chloroflexus sp. Y-400-fl] Length = 389 Score = 319 bits (817), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 148/315 (46%), Positives = 217/315 (68%), Gaps = 6/315 (1%) Query: 30 IKKRGFLKCGINTG-LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 I RG L CG+N L GFA V + G ++GFD+DFCRA+++A+FDDP+K+++ PL+A+ER Sbjct: 79 ILSRGTLICGVNNNPLPGFASVDSAGVYRGFDIDFCRAVAAALFDDPTKVEFRPLSAQER 138 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 F ALQS +ID+L RN+ WTL R+ +LGL + P T++DGQG ++ K GI ++ + GA+I Sbjct: 139 FTALQSGEIDVLIRNSTWTLGRDGTLGLDWAPTTFYDGQGMMVRKDSGIETLEDMDGATI 198 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 CVQ GTTTEL LAD F+A + + P+VF + AAY A +CD +T D S L + Sbjct: 199 CVQTGTTTELNLADQFRARGLTFTPVVFPDGDATRAAYDAGQCDGFTTDKSGLISSLTLL 258 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ-VSKD 267 P++H IL +SK PL PA+ QGD +W++ V W +A AEE GIT +N++Q + D Sbjct: 259 TNPADHKILDVTMSKEPLGPAVRQGDPQWFDAVRWIVFATFQAEEYGITSQNLDQFLGSD 318 Query: 268 TTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYN 327 P+++RFLGI+ +G +GL D+ R++RH+GNY E+++RNLG + +PRG N Sbjct: 319 V--PEIRRFLGIE--GELGAGIGLPNDFAARVVRHVGNYAEIYNRNLGPDTPFNLPRGLN 374 Query: 328 ALWSKGGLMYAPPIR 342 AL+++GGL+Y+PP R Sbjct: 375 ALYTEGGLLYSPPFR 389 >gi|126724899|ref|ZP_01740742.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Rhodobacterales bacterium HTCC2150] gi|126706063|gb|EBA05153.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Rhodobacterales bacterium HTCC2150] Length = 338 Score = 319 bits (817), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 149/316 (47%), Positives = 209/316 (66%), Gaps = 2/316 (0%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L D+K RG L CG+ TGLVGFA A+G W+GFDV CRA++ A D + ++++P K Sbjct: 25 LDDVKARGKLNCGVTTGLVGFAAPNADGRWEGFDVAVCRAVAVATLGDENAVEFVPTTGK 84 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 RF AL S +ID+L+RNT WTL R+ L F + Y+DGQGF+ K G++S L GA Sbjct: 85 TRFTALASGEIDMLARNTTWTLSRDADLKFTFVGVNYYDGQGFMAPKDLGVASAKDLDGA 144 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 ++C+Q GTTTEL LAD+F+++N+ Y P+ E E Y A CD +T D S L A + Sbjct: 145 TVCIQTGTTTELNLADFFRSNNISYEPVPIETNAEAQQQYLAGACDVFTTDASGLAATRA 204 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 T + P++HV+LP+I+SK PL P + GD+EW +IV W+ AM+TAEELGIT N ++S Sbjct: 205 TFENPADHVLLPEIVSKEPLGPLVRHGDSEWGDIVRWSLNAMITAEELGITSANAAEMSA 264 Query: 267 DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGY 326 T NP++ R LG + + +GE LGL+ DW II GNYGE+F+ N+G + + + RG Sbjct: 265 GTNNPEINRLLGSEGT--LGEMLGLSADWAKNIIMTQGNYGEVFENNIGENTAIGLSRGL 322 Query: 327 NALWSKGGLMYAPPIR 342 N+ W+ GGL+Y+PP R Sbjct: 323 NSQWTDGGLIYSPPFR 338 >gi|331005342|ref|ZP_08328727.1| amino acid ABC transporter, periplasmic amino acid-binding protein [gamma proteobacterium IMCC1989] gi|330420839|gb|EGG95120.1| amino acid ABC transporter, periplasmic amino acid-binding protein [gamma proteobacterium IMCC1989] Length = 336 Score = 319 bits (817), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 144/328 (43%), Positives = 214/328 (65%), Gaps = 3/328 (0%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 +LF + A L D+++RGF+ CG++ GL GF++ G W G DVD CRA+++A+F Sbjct: 11 VLFLAALGVKAGTLEDVRERGFVSCGVSDGLTGFSQKNDKGVWSGLDVDVCRAVAAAVFS 70 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 D K+ Y PL AKERF+ALQS ++D+LSRNT WTL R++++GL F I Y+DGQGF++ + Sbjct: 71 DADKVAYKPLTAKERFVALQSNEVDLLSRNTTWTLTRDVAMGLKFAGINYYDGQGFLVSQ 130 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 + G+SS +L GAS CVQAG+T+E+ + +F +NM Y +F++ ++ CD Sbjct: 131 ELGVSSAFELDGASFCVQAGSTSEVGIEIFFNNNNMTYKRRIFDKSSDVRDGLDKGMCDV 190 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 + D S LY+ + P V+LP++ISK PL P + QGD W+NIV W+ AM+ AE Sbjct: 191 ISSDQSQLYSFRTGLMNPESFVVLPEVISKEPLGPVVRQGDDTWFNIVRWSLVAMIEAEF 250 Query: 254 LGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRN 313 LGIT N++ + K + +R LG + + + L+ DW Y II+ +GNY E F+RN Sbjct: 251 LGITSLNVDILRK-SGELGQKRLLGSEGELSTNSS--LSADWAYNIIKQVGNYSESFERN 307 Query: 314 LGNQSELKIPRGYNALWSKGGLMYAPPI 341 +G++S LKI RG NA W+ GG++Y+PPI Sbjct: 308 VGSESTLKIARGLNAQWNAGGILYSPPI 335 >gi|86135803|ref|ZP_01054382.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Roseobacter sp. MED193] gi|85826677|gb|EAQ46873.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Roseobacter sp. MED193] Length = 346 Score = 318 bits (816), Expect = 6e-85, Method: Compositional matrix adjust. Identities = 148/316 (46%), Positives = 211/316 (66%), Gaps = 2/316 (0%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L D+K RG L CG+ TGLVGFA A+G+W+GFDV CRA+++A+ D + ++++P K Sbjct: 33 LDDVKARGKLNCGVTTGLVGFAAPNASGEWEGFDVAVCRAVAAAVLGDSNAVEFVPTTGK 92 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 RF AL S +ID+L+RNT WT R++ L F + Y+DGQGF++ K+ G+SS +L GA Sbjct: 93 TRFTALASGEIDMLARNTTWTFSRDVDLKFEFTGVNYYDGQGFMVPKELGVSSAKELDGA 152 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 ++C+Q GTTTEL LAD+F+++N+ Y P+ E E Y A CD YT D S L A + Sbjct: 153 TVCIQTGTTTELNLADFFRSNNISYEPVPIETNAEAQQQYLAGACDVYTTDASGLAATRA 212 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 T + P H +LP+IISK PL P + GD EW ++V WT A+++AEELG+T NI +++ Sbjct: 213 TFEAPDAHTLLPEIISKEPLGPLVRHGDHEWGDVVRWTLNALISAEELGVTSANIGEMAA 272 Query: 267 DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGY 326 T NP++ R LG + + +GE LGL+ DW I GNYGE+F N+G + + + RG Sbjct: 273 GTNNPEINRLLGTEGT--LGEMLGLSADWGKNAIAAGGNYGEVFADNIGEATPIGLARGL 330 Query: 327 NALWSKGGLMYAPPIR 342 NA W+KGGL+Y+PP R Sbjct: 331 NAQWTKGGLLYSPPFR 346 >gi|219847287|ref|YP_002461720.1| extracellular solute-binding protein family 3 protein [Chloroflexus aggregans DSM 9485] gi|219541546|gb|ACL23284.1| extracellular solute-binding protein family 3 [Chloroflexus aggregans DSM 9485] Length = 389 Score = 318 bits (815), Expect = 7e-85, Method: Compositional matrix adjust. Identities = 149/326 (45%), Positives = 220/326 (67%), Gaps = 4/326 (1%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTG-LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 T+ + ++ I RG L CG+N L GFA V A+G + GFD+DFCRA+++A+FDDP+ Sbjct: 67 TNQPASGGLIQQILARGRLICGVNNNPLPGFASVDASGVYSGFDIDFCRAVAAALFDDPT 126 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 K+ + PL+A+ERF ALQ+ +ID+L RN+ WTL R+ +LGL + P T++DGQG ++ K G Sbjct: 127 KVDFRPLSAQERFTALQTGEIDVLIRNSTWTLGRDGNLGLDWAPTTFYDGQGMMVRKDSG 186 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 I+++ + GA+ICVQ GTTTEL LAD F+A + + P+VF + AAY A +CD +T Sbjct: 187 INTLEDMDGATICVQTGTTTELNLADQFRARGLTFTPVVFPDGDSTRAAYDAGQCDGFTT 246 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 D S L + P++H IL +SK PL PA+ QGD +W++ V W +A AEE GI Sbjct: 247 DKSGLISSLTLLSNPADHKILEVTMSKEPLGPAVKQGDPQWFDAVRWIVFATFQAEEYGI 306 Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316 T +N+N ++ P+++RFLGI+ ++ +GL D+ RIIRH+GNY E+++RNLG Sbjct: 307 TSQNVNDF-LNSDVPEIRRFLGIE--GDLAAGIGLPNDFAVRIIRHVGNYAEIYNRNLGP 363 Query: 317 QSELKIPRGYNALWSKGGLMYAPPIR 342 + +PRG NAL++ GGL+Y+PP R Sbjct: 364 DTPFNLPRGLNALYTDGGLLYSPPFR 389 >gi|33594685|ref|NP_882329.1| putative ABC transporter periplasmic amino acid-binding protein [Bordetella pertussis Tohama I] gi|33598479|ref|NP_886122.1| putative ABC transporter periplasmic amino acid-binding protein [Bordetella parapertussis 12822] gi|33603422|ref|NP_890982.1| putative ABC transporter periplasmic amino acid-binding protein [Bordetella bronchiseptica RB50] gi|33564761|emb|CAE44086.1| putative ABC transporter periplasmic amino acid-binding protein [Bordetella pertussis Tohama I] gi|33574608|emb|CAE39258.1| putative ABC transporter periplasmic amino acid-binding protein [Bordetella parapertussis] gi|33577546|emb|CAE34811.1| putative ABC transporter periplasmic amino acid-binding protein [Bordetella bronchiseptica RB50] Length = 338 Score = 317 bits (813), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 144/324 (44%), Positives = 227/324 (70%), Gaps = 3/324 (0%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 S + + ++KK+GF++CG++TG+ GF+ + G+WKG DVD CRA+++ +F D SK Sbjct: 18 SVAHAGATFDNVKKKGFVQCGVSTGIPGFSIADSKGEWKGLDVDMCRAIAATMFGDASKF 77 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + PLN ++RF ALQS ++D+L+RNT TL R+ +LGL + Y+D QG ++ K+ G+ Sbjct: 78 KVTPLNTQQRFTALQSGEVDVLTRNTTVTLTRDTTLGLIGVGVNYYDSQGVMVSKELGVK 137 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 S +L+GA++CVQ GTTTEL LAD+F+ + +++ P+V ++ +EI A+ A RCDA+T D Sbjct: 138 SAKELNGATVCVQPGTTTELNLADWFRGNKIEFKPVVIDKYDEIVRAFSAGRCDAFTTDK 197 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 S L + + T ++P +VILP+ SK PL P + QGD +W+N+V W+ AM+ AEE GIT Sbjct: 198 SQLASTRTTLEKPDNYVILPEDFSKEPLGPMVRQGDEQWFNVVRWSLNAMLEAEEYGITS 257 Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318 KN+++++K ++NP++QR LG+ + +G+ LG+ W + II+ +GNYGE F+ LG S Sbjct: 258 KNVDEMAK-SSNPNIQRILGV--TPGMGKNLGVDDKWAFNIIKQVGNYGESFEATLGKSS 314 Query: 319 ELKIPRGYNALWSKGGLMYAPPIR 342 +K+ RG NA + +GGLMY P+R Sbjct: 315 AMKLERGLNASYKQGGLMYGWPVR 338 >gi|163848771|ref|YP_001636815.1| extracellular solute-binding protein [Chloroflexus aurantiacus J-10-fl] gi|163670060|gb|ABY36426.1| extracellular solute-binding protein family 3 [Chloroflexus aurantiacus J-10-fl] Length = 389 Score = 317 bits (813), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 147/315 (46%), Positives = 217/315 (68%), Gaps = 6/315 (1%) Query: 30 IKKRGFLKCGINTG-LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 I RG L CG+N L GFA V + G ++GFD+DFCRA+++A+FDDP+K+++ PL+A+ER Sbjct: 79 ILSRGTLICGVNNNPLPGFASVDSAGVYRGFDIDFCRAVAAALFDDPTKVEFRPLSAQER 138 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 F ALQS +ID+L RN+ WTL R+ +LGL + P T++DGQG ++ K GI ++ + GA+I Sbjct: 139 FTALQSGEIDVLIRNSTWTLGRDGTLGLDWAPTTFYDGQGMMVRKDSGIETLEDMDGATI 198 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 CVQ G+TTEL LAD F+A + + P+VF + AAY A +CD +T D S L + Sbjct: 199 CVQTGSTTELNLADQFRARGLTFTPVVFPDGDATRAAYDAGQCDGFTTDKSGLISSLTLL 258 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ-VSKD 267 P++H IL +SK PL PA+ QGD +W++ V W +A AEE GIT +N++Q + D Sbjct: 259 TNPADHKILDVTMSKEPLGPAVRQGDPQWFDAVRWIVFATFQAEEYGITSQNLDQFLGSD 318 Query: 268 TTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYN 327 P+++RFLGI+ +G +GL D+ R++RH+GNY E+++RNLG + +PRG N Sbjct: 319 V--PEIRRFLGIE--GELGAGIGLPNDFAARVVRHVGNYAEIYNRNLGPDTPFNLPRGLN 374 Query: 328 ALWSKGGLMYAPPIR 342 AL+++GGL+Y+PP R Sbjct: 375 ALYTEGGLLYSPPFR 389 >gi|242280380|ref|YP_002992509.1| extracellular solute-binding protein family 3 [Desulfovibrio salexigens DSM 2638] gi|242123274|gb|ACS80970.1| extracellular solute-binding protein family 3 [Desulfovibrio salexigens DSM 2638] Length = 336 Score = 317 bits (813), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 150/338 (44%), Positives = 227/338 (67%), Gaps = 5/338 (1%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F S +CL+I+ S + A L ++KK GFLK G + GF+ + +NG GFDVDF Sbjct: 4 FRTSFICLMIVAMASIA-QAGTLDNVKKDGFLKAGTHIENPGFSALDSNGKRVGFDVDFI 62 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 RA+++A+ + +I+Y PL +KER ALQS +IDILSR T T+ R++ LGL F T + Sbjct: 63 RAVAAAV--NVPEIKYTPLTSKERLPALQSGEIDILSRTTTHTMSRDVKLGLDFTVTTLY 120 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 DGQG ++ K+ GI+ L GA++C+Q G+TTEL ++D+F+ + M + P+VF++ ++ Sbjct: 121 DGQGMMVRKELGITDAKDLDGATVCLQTGSTTELNISDFFRKNGMSFTPVVFDKQPDVRK 180 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 AY RCD +T D+S L A + ++P+EH+IL ++ISK PL P + GD +W +IV WT Sbjct: 181 AYDTGRCDVHTTDVSGLAAQRSLMEKPAEHIILSEVISKEPLGPVVRHGDNQWSDIVRWT 240 Query: 245 HYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMG 304 + + AEE G+TQ N+ ++ ++ +P+VQR LG K+ ++ LGL KD RII+ +G Sbjct: 241 IWLTMAAEEKGVTQANVEKMFANSKDPEVQRMLG--KTGSLWTDLGLDKDAPVRIIKTVG 298 Query: 305 NYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 NYGE+FDRNLG ++ L++ RG N W++GGL+YAPP R Sbjct: 299 NYGEIFDRNLGPKTPLRMERGLNKQWNEGGLIYAPPFR 336 >gi|297624238|ref|YP_003705672.1| family 3 extracellular solute-binding protein [Truepera radiovictrix DSM 17093] gi|297165418|gb|ADI15129.1| extracellular solute-binding protein family 3 [Truepera radiovictrix DSM 17093] Length = 339 Score = 317 bits (813), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 150/342 (43%), Positives = 220/342 (64%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F S LC++I FT L +++ RG L CG+N L GF V G+ +GFD Sbjct: 1 MRKWFVGSALCVLIASFTVAQAQGK-LAEVRNRGSLVCGVNDVLPGFGTVNEEGEHEGFD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDFC+A+++A+ D + Y PL+A+ERF A+Q+ ++D+L RNT WT R+ +GL F P Sbjct: 60 VDFCKAIAAAVLGDADAVTYRPLSAQERFTAVQTGEVDVLIRNTTWTSSRDTEVGLNFGP 119 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + ++DGQGF++ + GI S+ L G I VQ+GTTTEL LAD A +++Y P++FE + Sbjct: 120 VIFYDGQGFMVRRDSGIESLEDLEGRRIGVQSGTTTELNLADVMSALDIQYEPVIFETSD 179 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 ++ AAY DA+T D S L +L ++ P EH IL ISK PLAPA++ GD EWY++ Sbjct: 180 QLVAAYDDGAVDAWTTDKSGLASLLISLSDPEEHRILDATISKEPLAPAVLHGDDEWYDV 239 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V W + ++ AEE GIT +N+ ++++ +TNP++QR LG + S+ E +GL D I Sbjct: 240 VKWVIFGLMEAEEYGITSENVRELAETSTNPNIQRILGAEPSAV--EQIGLEADAIATAI 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGE+++RNLG + IPRG NA + +GGL+Y P R Sbjct: 298 EAVGNYGEIYERNLGEGTPFNIPRGLNAQYYEGGLIYGMPFR 339 >gi|158338716|ref|YP_001519893.1| lysine-arginine-ornithine-binding periplasmic protein, putative [Acaryochloris marina MBIC11017] gi|158308957|gb|ABW30574.1| lysine-arginine-ornithine-binding periplasmic protein, putative [Acaryochloris marina MBIC11017] Length = 343 Score = 317 bits (812), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 149/341 (43%), Positives = 221/341 (64%), Gaps = 9/341 (2%) Query: 8 SILC---LIILFFTSFSTNASILGDIKK---RGFLKCGINTGLVGFAEVKANGDWKGFDV 61 S LC L+ L S S++ + G +++ + ++CGI+ L GF+ V G++ G DV Sbjct: 6 SSLCAALLVALTLGSCSSSEAAGGRLQQVLAQKKVRCGISGELPGFSFVDEKGNYSGLDV 65 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D CRA+++A+FDDP ++Y PLNAKERF A+Q+ ++D+LSRNT WTL R+ S+ +AF P+ Sbjct: 66 DICRAIAAALFDDPDAVEYRPLNAKERFAAVQTGEVDVLSRNTTWTLDRDSSVRMAFAPV 125 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 ++DGQG ++ GI ++ ++C Q GTT E L D + + Y +V+E + Sbjct: 126 VFYDGQGVMVKADSGIKTLKDFKNRTVCTQTGTTNEKNLKDQMRKRKVDYKLVVYEDINS 185 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 AAY RCD T D S L + + +P H IL +++SK PLAPA+ GD EW ++V Sbjct: 186 AYAAYAEGRCDGVTSDRSQLISRRTALPKPESHTILDEVLSKEPLAPAVADGDVEWADVV 245 Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301 W A V AEELGI Q N+ +K + +P V+RFLG ++ +G++LGL+ D+ RI++ Sbjct: 246 RWVVNATVEAEELGIQQDNLASFAK-SEDPVVKRFLGTEE--ELGKSLGLSPDFAARIVK 302 Query: 302 HMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 H+GNYGE++DRNLG ++L +PRG N LWSKGGLMY+PP R Sbjct: 303 HVGNYGEIYDRNLGPNTKLNLPRGQNQLWSKGGLMYSPPFR 343 >gi|311108521|ref|YP_003981374.1| general L-amino acid-binding periplasmic protein AapJ 2 [Achromobacter xylosoxidans A8] gi|310763210|gb|ADP18659.1| general L-amino acid-binding periplasmic protein AapJ 2 [Achromobacter xylosoxidans A8] Length = 338 Score = 317 bits (811), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 144/335 (42%), Positives = 218/335 (65%), Gaps = 3/335 (0%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 +I L + +S + L ++KRG+L+CG++TG+ GF+ + G W G DVD CRA+ Sbjct: 7 AICALALAAVSSQAFAGPTLDTVRKRGYLQCGVSTGIQGFSAPDSKGTWHGLDVDMCRAI 66 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 ++ +F+D +K + PL + RF ALQS ++D+L+RN T+ R+ +LGL + Y+D Q Sbjct: 67 AATVFNDATKYRLTPLTTQARFTALQSGEVDVLTRNVTPTMARDTTLGLLSVAVNYYDSQ 126 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 G ++ K G+ + +L GA++CVQ GT TEL LAD+F++ ++++ P+V E+ +EI A+ Sbjct: 127 GVMVSDKLGVKKLRELDGATVCVQPGTVTELDLADWFRSQSLRFKPVVIEKYDEIVRAFS 186 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 A RCDA+T D S L A ++T + P +VIL + ISKSPL P + QGD W NIV W+ A Sbjct: 187 AGRCDAFTSDKSQLAASRMTLENPESYVILDENISKSPLGPMVRQGDDNWINIVRWSLNA 246 Query: 248 MVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYG 307 M+ AEE GIT N++ K +P+VQR LG+ + +G +G+ W Y I++ +GNYG Sbjct: 247 MLEAEEFGITSSNVDAQLK-ANSPNVQRILGV--TPGMGRNMGVDDKWAYNIVKQVGNYG 303 Query: 308 EMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 E ++RNLG S +K+PR NA W GGLMY P+R Sbjct: 304 ESYERNLGMSSPMKLPRALNAQWRDGGLMYGWPVR 338 >gi|85703851|ref|ZP_01034954.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Roseovarius sp. 217] gi|85671171|gb|EAQ26029.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Roseovarius sp. 217] Length = 339 Score = 316 bits (810), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 150/317 (47%), Positives = 211/317 (66%), Gaps = 3/317 (0%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L D+K RG L CG+ TGLVGFA ANG W+GFDV CRA+++A+ D + ++++P K Sbjct: 25 LDDVKARGKLNCGVTTGLVGFAAPDANGVWEGFDVAVCRAVAAAVLSDANAVEFVPTTGK 84 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 RF AL S +ID+L+RNT WT R+ L F + Y+DGQGF++ K G+SS +L GA Sbjct: 85 TRFTALASGEIDMLARNTTWTFSRDTDLKFDFVGVNYYDGQGFLVPKSLGVSSAKELDGA 144 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 ++C+Q GTTTEL LAD+F+A+N+ Y P+ E E Y A CD YT D S L + + Sbjct: 145 TVCIQTGTTTELNLADFFRANNISYEPVPIETNAEGQQQYLAGACDTYTTDASGLASTRA 204 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 + P++HVILP+IISK PL P + GD +W +IV WT YA+V AEE+GIT NI ++S Sbjct: 205 AFESPTDHVILPEIISKEPLGPLVRHGDNDWADIVRWTFYALVAAEEMGITSANIGELSA 264 Query: 267 DT-TNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRG 325 NP++ R LG + ++G +GL +W R I GNYGE+F++N+G ++ + + RG Sbjct: 265 AAGDNPEINRILGTE--GDLGAMIGLDNEWAKRAIAASGNYGEIFEKNIGEKTPIGLARG 322 Query: 326 YNALWSKGGLMYAPPIR 342 NA W++GG+MYAPP R Sbjct: 323 LNAQWTQGGIMYAPPFR 339 >gi|163854807|ref|YP_001629105.1| putative extracellular solute-binding protein [Bordetella petrii DSM 12804] gi|163258535|emb|CAP40834.1| putative extracellular solute-binding protein [Bordetella petrii] Length = 338 Score = 315 bits (808), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 145/313 (46%), Positives = 220/313 (70%), Gaps = 3/313 (0%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 +KK+GF++CG++TG+ GF+ + G+WKG DV CRA+++ +F+D +K + PLN ++RF Sbjct: 29 VKKKGFVQCGVSTGIPGFSMADSKGEWKGIDVAMCRAIAATMFNDSTKFKVTPLNTQQRF 88 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 ALQS ++D+L+RNT TL R+ +LGL + Y+D QG ++ K G+ S +L+GA+IC Sbjct: 89 TALQSGEVDVLTRNTTQTLTRDTTLGLIGAGVNYYDSQGVMVSKDLGVKSAKELNGATIC 148 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 VQ GTTTEL LAD+F+ +++ P+V ++ +EI A+ A RCDA+T D S L + + T + Sbjct: 149 VQPGTTTELNLADWFRGQKIEFKPVVIDKYDEIIRAFSAGRCDAFTTDKSQLASTRTTLE 208 Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 P VILP+ SK PL P + QGD +W+NIV W+ AM+ AEE GIT KN+++++K ++ Sbjct: 209 NPDNFVILPEDFSKEPLGPMVRQGDEQWFNIVRWSLNAMLEAEEYGITSKNVDEMAK-SS 267 Query: 270 NPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNAL 329 NP++QR LG+ + +G+ LG+ W Y II+ +GNYGE+F+R LG S +K+ RG NA Sbjct: 268 NPNIQRILGV--TPGMGKNLGVDDKWAYTIIKQVGNYGEVFERTLGADSAMKLERGLNAS 325 Query: 330 WSKGGLMYAPPIR 342 + GGLMY P+R Sbjct: 326 YKDGGLMYGWPVR 338 >gi|310816976|ref|YP_003964940.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Ketogulonicigenium vulgare Y25] gi|308755711|gb|ADO43640.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Ketogulonicigenium vulgare Y25] Length = 338 Score = 315 bits (808), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 152/319 (47%), Positives = 207/319 (64%), Gaps = 2/319 (0%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 A+ L D+K R L CG NTGL GFA A+G W+GFDV CRA+++A+ DP+K+ ++P Sbjct: 22 AATLDDVKARDVLNCGTNTGLAGFAAPNADGVWEGFDVAVCRAVAAAVLGDPTKVNFVPT 81 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 RF AL S +ID+LSR T WT R++ L F + Y+DGQGFI+ G++S +L Sbjct: 82 TGATRFTALASGEIDMLSRVTTWTFQRDVELAFDFVGVNYYDGQGFIVPTSLGVTSAHEL 141 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 GA++C+Q GTTTEL LAD+F+A+ + Y P+ E E Y A CDAYT D S L A Sbjct: 142 DGATVCIQTGTTTELNLADFFRANGISYEPVPIETNAEGQQQYLAGACDAYTTDASGLAA 201 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 + T + P +H+ILP+IISK PL P + GD +W +IV W+ +A+V AEE GIT NI + Sbjct: 202 TRATFEAPGDHIILPEIISKEPLGPVVRHGDNQWGDIVRWSFFALVAAEEYGITSANIEE 261 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 +S T NP++ R LG + N+GE LGL +W R I GNYGE+F + LG + + + Sbjct: 262 LSAGTDNPEINRILGTE--GNLGEQLGLDAEWAKRAIAAEGNYGEIFAKYLGTDTPIGLD 319 Query: 324 RGYNALWSKGGLMYAPPIR 342 RG NALW++GGL YA P R Sbjct: 320 RGLNALWTQGGLQYAMPFR 338 >gi|209524398|ref|ZP_03272947.1| extracellular solute-binding protein family 3 [Arthrospira maxima CS-328] gi|209495189|gb|EDZ95495.1| extracellular solute-binding protein family 3 [Arthrospira maxima CS-328] Length = 355 Score = 315 bits (807), Expect = 7e-84, Method: Compositional matrix adjust. Identities = 140/354 (39%), Positives = 221/354 (62%), Gaps = 16/354 (4%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGD--------------IKKRGFLKCGINTGLVGFA 48 + F + + CL L T+ S D +K RG L CG++ G+ GF+ Sbjct: 4 RGFLLLVSCLSALSLTACEPGGSPGSDGLAAGGSGQSRLNVVKNRGVLICGVDGGIPGFS 63 Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 V +G++ G DVD C+A+++A+FDDP+ +QY L++ ERF A+++ ++D+LSRNT WTL Sbjct: 64 FVDQSGEYSGLDVDVCKAVAAALFDDPNAVQYRNLDSTERFEAMRAGEVDMLSRNTTWTL 123 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168 R+ S+G+ F P T+ DGQG ++ GI+S+ ++CV+AGTTTEL L D + Sbjct: 124 SRDTSVGMEFAPTTFHDGQGMMVRADSGITSLEDFQDRAVCVEAGTTTELNLTDNMRERG 183 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 + + + F++ + AAY RC+ T D S L A + T P++H+IL +SK PL P Sbjct: 184 ITFETVTFQQADPAYAAYAEGRCEGMTSDKSQLLARRSTLPNPNDHIILDVTMSKEPLGP 243 Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEA 288 + D+ W++ V W +A+ AEELGITQ N+ ++++ + NP ++RFLG++ ++G Sbjct: 244 VTLNNDSAWFDTVKWVTFALFEAEELGITQANVEEIAQTSENPTIRRFLGVE--GDLGTG 301 Query: 289 LGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GLT D+ R+IRH+GNY E++DRNLG S+ +PR N LW+ GGL+++PP R Sbjct: 302 MGLTNDFAARVIRHVGNYAEVYDRNLGAGSQFNLPRNENELWTNGGLLFSPPFR 355 >gi|83595863|gb|ABC25225.1| glutamate/glutamine/aspartate/asparagine-binding protein bztA precursor [uncultured marine bacterium Ant4D3] Length = 340 Score = 314 bits (805), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 146/315 (46%), Positives = 204/315 (64%), Gaps = 3/315 (0%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 D++ G LKC + TGL GFA ANG W+GFD DFCRA+++A+ D K++++P K R Sbjct: 28 DVRAAGELKCVVTTGLAGFAAPDANGRWEGFDADFCRAVAAAVLGDGDKVKFVPSTGKTR 87 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 F L S + DIL RNT TL R++ L L+F P+ ++DGQGF++ G++S L GAS+ Sbjct: 88 FTMLNSGEGDILFRNTTETLSRDVDLKLSFLPVNFYDGQGFMVPAALGVTSAMDLDGASV 147 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 C+Q GTTTEL LADYF+A+ M Y P+ E EE Y A RCD YT D S L + + Sbjct: 148 CIQTGTTTELNLADYFRANGMSYEPVPIETNEEGFTNYVAGRCDVYTTDASGLASTRAKF 207 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN-INQVSKD 267 D P++HV+LP+IISK PL A+ GD +W++I W A++ AEE+G+TQ N +N + Sbjct: 208 DDPTQHVVLPEIISKEPLGGAVRHGDDQWHDIGKWVVNALINAEEMGVTQANAMNLAANV 267 Query: 268 TTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYN 327 NP + R +G + S +G LGL W R + GNYGE+++RN+G + L+I RG N Sbjct: 268 GKNPGINRLVGSEGS--MGAMLGLDAKWAARAVAQGGNYGEIYERNVGPNTPLEIARGLN 325 Query: 328 ALWSKGGLMYAPPIR 342 LW+ GG++YA PIR Sbjct: 326 NLWNNGGVLYAAPIR 340 >gi|163745575|ref|ZP_02152935.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Oceanibulbus indolifex HEL-45] gi|161382393|gb|EDQ06802.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Oceanibulbus indolifex HEL-45] Length = 338 Score = 314 bits (804), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 147/316 (46%), Positives = 207/316 (65%), Gaps = 2/316 (0%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L D+K RG L CG+ TGL GFA ANG+W+GFDV CRA+++A+ D + ++++P K Sbjct: 25 LDDVKARGKLNCGVTTGLAGFAAPNANGEWEGFDVAVCRAVAAAVLGDKNAVEFVPTTGK 84 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 RF AL S +ID L+RNT WT R+ L F + Y+DGQGF++ K G+SS L GA Sbjct: 85 TRFTALASGEIDFLARNTTWTFSRDTDLKFDFIGVNYYDGQGFMVPKALGVSSAKDLDGA 144 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 ++C+Q GTTTEL LAD+F+ +N+ Y P+ E E Y A CD YT D S L A + Sbjct: 145 TVCIQTGTTTELNLADFFRKNNISYEPVPVETNAEGQQQYLAGACDTYTTDASGLAATRA 204 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 T + P +H++LP+IISK PL P + GD EW +I W A++ AEELGIT NI +++ Sbjct: 205 TFETPGDHILLPEIISKEPLGPLVRHGDNEWGDITRWVLNALIAAEELGITSANIEEMTG 264 Query: 267 DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGY 326 +T NP++ R LG + + +GE +GL +W R I GNYGE+F +N+G ++ + + RG Sbjct: 265 NTNNPEIARLLGTEGT--LGEMIGLDNEWAKRAIMAEGNYGEIFAKNIGEETPIGLARGL 322 Query: 327 NALWSKGGLMYAPPIR 342 NA W+ GGL+YAPP+R Sbjct: 323 NAQWTDGGLLYAPPVR 338 >gi|269964209|ref|ZP_06178500.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio harveyi 1DA3] gi|269831058|gb|EEZ85226.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio harveyi 1DA3] Length = 285 Score = 312 bits (800), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 144/274 (52%), Positives = 191/274 (69%), Gaps = 3/274 (1%) Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 S + +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F + Y+DGQG Sbjct: 15 SRSLGNKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVGVNYYDGQG 74 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 F++ K G+SS +L GAS+CVQ+GTTTEL LADYF+ M Y P+VF+ + + A Sbjct: 75 FMVKKDLGVSSAKELDGASVCVQSGTTTELNLADYFRNQGMAYKPVVFDTAAQTSKGFDA 134 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 RCD T D S LYAL+L PS +LP+IISK PL P + QGD +W+NI WT +AM Sbjct: 135 GRCDVLTTDQSGLYALRLNLKDPSSATVLPEIISKEPLGPVVRQGDDQWFNIAKWTLFAM 194 Query: 249 VTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGE 308 V AEE GIT KN +++ K + +P+++R LG+D G+ LG+ DW Y++I+ +GNYGE Sbjct: 195 VNAEEYGITSKNADEMLK-SKDPNIKRILGVDGPK--GKGLGIRDDWGYQVIKQVGNYGE 251 Query: 309 MFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 F+R +G S LKI RG NALW+ GG MYAPPIR Sbjct: 252 SFERTVGTGSPLKISRGVNALWNAGGFMYAPPIR 285 >gi|317404416|gb|EFV84833.1| extracellular solute-binding protein [Achromobacter xylosoxidans C54] Length = 338 Score = 312 bits (799), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 142/314 (45%), Positives = 221/314 (70%), Gaps = 3/314 (0%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 ++KK+GF++CG++TG+ GF+ + G++KG DVD CRA+++ +F D SK + PLN ++R Sbjct: 28 NVKKKGFVQCGVSTGIPGFSIADSKGEYKGLDVDLCRAVAATMFGDASKFKVTPLNTQQR 87 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 F ALQS ++D+L+RNT TL R+ +LGL + Y+D QG ++ K + S +L+GA+I Sbjct: 88 FTALQSGEVDVLTRNTTVTLTRDTTLGLIGVGVNYYDSQGVMVSKDLNVKSAKELNGATI 147 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 CVQ GTTTEL LAD+F+ +++ P+V ++ +EI A+ A RCDA+T D S L + + T Sbjct: 148 CVQPGTTTELNLADWFRGQKIEFKPVVIDKYDEIIRAFSAGRCDAFTTDKSQLASTRTTL 207 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 + P +++ILP+ SK PL P + QGD +W+N++ W+ AM+ AEE GIT KN+++++K + Sbjct: 208 ENPDKYIILPEDFSKEPLGPMVRQGDEQWFNVIRWSLNAMLEAEEYGITSKNVDEMTK-S 266 Query: 269 TNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNA 328 TNP++QR LG+ + +G+ LG+ W Y II+ +GNYGE F+ LG S +K+ RG NA Sbjct: 267 TNPNIQRILGV--TPGMGKNLGVDDKWAYNIIKQVGNYGESFEATLGKSSAMKLERGLNA 324 Query: 329 LWSKGGLMYAPPIR 342 + +GGLMY P+R Sbjct: 325 SYKQGGLMYGWPVR 338 >gi|126728211|ref|ZP_01744027.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Sagittula stellata E-37] gi|126711176|gb|EBA10226.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Sagittula stellata E-37] Length = 336 Score = 312 bits (799), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 141/323 (43%), Positives = 206/323 (63%), Gaps = 3/323 (0%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + A L ++K RG L CG+NTGLVGFA +NG+W+GFDV CRA+++A+ DP + + Sbjct: 16 AATAGTLDEVKSRGTLNCGVNTGLVGFASKDSNGEWRGFDVGLCRAVAAAVLGDPMAVNF 75 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + A RF AL + +ID+L RNT W+ +I L + F I Y+DGQ F++ K G+SS Sbjct: 76 VETTAATRFTALNAGEIDLLVRNTTWSFSTDIDLKVDFAGINYYDGQAFMVPKTLGLSSA 135 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 +L G SICVQAGTT+ L + +YF + M Y + E E Y C+ Y+ D S Sbjct: 136 RELDGRSICVQAGTTSALNVDEYFDRYQMSYEAVPVEGTAEAQTLYLEGACEVYSSDASQ 195 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L A++ T P +HV+L DIISK PL PA+ GD +W +IV WT A++ AEELG+ N Sbjct: 196 LAAIRATFGNPGDHVLLEDIISKEPLGPAVRHGDNDWADIVRWTLNALIAAEELGVNSAN 255 Query: 261 INQV-SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSE 319 ++++ ++ T+ P+++R LG++ +GE LGL DW R I+ GNYGE+F RN+G + Sbjct: 256 VDELKAQGTSTPEIKRLLGLE--GRMGEMLGLDSDWAVRAIKAGGNYGELFSRNIGVDTP 313 Query: 320 LKIPRGYNALWSKGGLMYAPPIR 342 + + RG N W++GGL+Y+PP R Sbjct: 314 IGLSRGLNLQWTEGGLLYSPPFR 336 >gi|27378020|ref|NP_769549.1| amino acid binding protein [Bradyrhizobium japonicum USDA 110] gi|27351166|dbj|BAC48174.1| bll2909 [Bradyrhizobium japonicum USDA 110] Length = 337 Score = 312 bits (799), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 145/317 (45%), Positives = 209/317 (65%), Gaps = 4/317 (1%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L +K RG L CG++ G GF+ + G++KG DVD+CRAL++ + D SK++Y+ L A+ Sbjct: 24 LDTVKSRGTLVCGVSAGFAGFSAPDSQGNYKGLDVDYCRALAAGVLGDASKVRYVSLTAQ 83 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 RF ALQS +ID+L RN+ T LR ++LGL PI ++DGQGF++ K G+ + L GA Sbjct: 84 NRFTALQSGEIDVLYRNSTQTYLRGVTLGLRQGPINFYDGQGFVVKKDLGVKDIKDLKGA 143 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY-ALK 205 ++CV GTT E+TL DY +A+ + + P+VF+RV+ + + RCDA T D SAL A+ Sbjct: 144 TVCVAQGTTHEVTLGDYGRANGIDWKPLVFDRVDTMYQTFFGGRCDAMTQDASALAGAVT 203 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 P+++V+LP ISK PL P GD W +I++W HY ++ AEELG+TQ N+++++ Sbjct: 204 TAAPNPADYVVLPQTISKEPLGPFTRNGDEVWSDIITWLHYGLIEAEELGVTQANVDEMA 263 Query: 266 KDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRG 325 K T P +QR LG S ++G LGL W I+ GNYGE+++RN+G S LK+ RG Sbjct: 264 KSQT-PAIQRLLG--ASGDLGSRLGLDNKWLVTAIKATGNYGEIYERNVGKASPLKLDRG 320 Query: 326 YNALWSKGGLMYAPPIR 342 N LWSKGGLMYA P + Sbjct: 321 LNGLWSKGGLMYAVPFK 337 >gi|323698172|ref|ZP_08110084.1| extracellular solute-binding protein family 3 [Desulfovibrio sp. ND132] gi|323458104|gb|EGB13969.1| extracellular solute-binding protein family 3 [Desulfovibrio desulfuricans ND132] Length = 337 Score = 312 bits (799), Expect = 6e-83, Method: Compositional matrix adjust. Identities = 143/334 (42%), Positives = 221/334 (66%), Gaps = 3/334 (0%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 I +I L + S A L +++ G L G++ G+ GF+ +NG W GFDVD +A++ Sbjct: 7 IFMVIALLAMAGSALAGTLEKVQQNGELVLGVSEGVAGFSAPDSNGKWAGFDVDMGKAVA 66 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 +A+ +P I+Y+PL +K++ +A+ S Q+D LSR T WT+ R+ G+ F + ++DGQG Sbjct: 67 AAVLKNPDAIKYVPLASKQKIVAVSSGQVD-LSRGTTWTMKRDCKQGVDFTVVLFYDGQG 125 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 ++ K G++ ++L GAS+ V +GTT+EL +AD+ +A+N+K +VFE +E AY A Sbjct: 126 LMVKKGLGVTKATELDGASVAVVSGTTSELNVADFARANNIKLETVVFESKKEAFNAYVA 185 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 R DA+T D+S L +L+ P EH+ILP++ SK PL+P + GD +W ++V+W + + Sbjct: 186 GRADAFTTDVSQLASLRAGTTNPDEHIILPEVFSKEPLSPFVRHGDQQWKDLVTWVLFGL 245 Query: 249 VTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGE 308 + AEE GITQ N+ ++ +T+P VQR LG + ++G + L DW R I+ +GNYGE Sbjct: 246 IEAEEKGITQANVLEMKAKSTDPVVQRMLG--ATGDVGALIDLDNDWLVRAIQAVGNYGE 303 Query: 309 MFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 M+DRN G +S LKIPRG+N LW+KGGL+YA PIR Sbjct: 304 MYDRNFGPKSALKIPRGHNNLWTKGGLIYAMPIR 337 >gi|313902268|ref|ZP_07835673.1| extracellular solute-binding protein family 3 [Thermaerobacter subterraneus DSM 13965] gi|313467419|gb|EFR62928.1| extracellular solute-binding protein family 3 [Thermaerobacter subterraneus DSM 13965] Length = 385 Score = 311 bits (797), Expect = 9e-83, Method: Compositional matrix adjust. Identities = 136/313 (43%), Positives = 210/313 (67%), Gaps = 3/313 (0%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 + RG L CG+N L GF+ + +G GFD DFCRA+++A+FDDP+ +++ PL+A+ERF Sbjct: 76 VLSRGKLICGVNGQLPGFSYLDPSGQMTGFDADFCRAIAAALFDDPNAVEFRPLSAQERF 135 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 A+QS ++D+L RNT WTL R+ G+ F P T++DG G ++ K + + S++ L GA+IC Sbjct: 136 TAVQSGEVDVLIRNTTWTLGRDTVNGMEFLPTTFYDGGGVMVRKDRNVKSLADLDGATIC 195 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V +GTT E+ L D +A + P FE +++ A Y + CDA T D S L + Sbjct: 196 VLSGTTNEMVLTDRMRALGASFTPKTFEDADQLYATYESGGCDAVTSDKSQLAGRRAVLS 255 Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 P HVIL +++SK PL PA+ D+ W+++V W +A + AEE GI +N++Q K++ Sbjct: 256 DPDNHVILDEMLSKEPLGPAVKNNDSTWFDVVKWIVFATIQAEEFGINSQNVDQF-KNSD 314 Query: 270 NPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNAL 329 NPD++RFLG++ +G+ LG++ D+ YR+I+H+GNYGE+++RNLG + K+ RG N L Sbjct: 315 NPDIRRFLGVE--GELGKGLGISNDFAYRVIKHVGNYGEIYERNLGPDTPFKLERGLNEL 372 Query: 330 WSKGGLMYAPPIR 342 W+ GGL+Y+PP R Sbjct: 373 WTNGGLLYSPPFR 385 >gi|293602099|ref|ZP_06684552.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding protein [Achromobacter piechaudii ATCC 43553] gi|292819501|gb|EFF78529.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding protein [Achromobacter piechaudii ATCC 43553] Length = 357 Score = 311 bits (797), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 142/314 (45%), Positives = 223/314 (71%), Gaps = 3/314 (0%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 ++KK+GF++CG++TG+ GF+ + G++KG DVD CRA++S +F D +K+++ PLN ++R Sbjct: 47 NVKKKGFVQCGVSTGIPGFSIADSKGEYKGIDVDMCRAIASTMFGDATKVKFTPLNTQQR 106 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 F ALQS ++D+L+RNT TL R+ +LGL + Y+D QG ++ K + S +L+GA+I Sbjct: 107 FTALQSGEVDVLTRNTTVTLTRDTTLGLIGVGVNYYDSQGVMVSKDLNVKSAKELNGATI 166 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 CVQ GTTTEL LAD+F+ +++ P+V ++ +EI A+ A RCDA+T D S L + + T Sbjct: 167 CVQPGTTTELNLADWFRGQKIEFKPVVIDKYDEIIRAFSAGRCDAFTTDKSQLASTRTTL 226 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 + P + VILP+ SK PL P + QGD +W+N+V W+ AM+ AEE GIT+ N+++++K + Sbjct: 227 ENPDKFVILPEDFSKEPLGPMVRQGDEQWFNVVRWSLNAMLEAEEYGITKANVDEMTK-S 285 Query: 269 TNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNA 328 +NP++QR LG+ + +G+ LG+ W Y II+++GNYGE F+ LG S +K+ RG NA Sbjct: 286 SNPNIQRILGV--TPGMGKNLGVDDKWAYNIIKNVGNYGESFEATLGKGSAMKLERGLNA 343 Query: 329 LWSKGGLMYAPPIR 342 + +GGLMY P+R Sbjct: 344 SYKQGGLMYGWPVR 357 >gi|311109074|ref|YP_003981927.1| general L-amino acid-binding periplasmic protein AapJ 4 [Achromobacter xylosoxidans A8] gi|310763763|gb|ADP19212.1| general L-amino acid-binding periplasmic protein AapJ 4 [Achromobacter xylosoxidans A8] Length = 338 Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 143/314 (45%), Positives = 221/314 (70%), Gaps = 3/314 (0%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 ++KK+GF++CG++TG+ GF+ + G++KG DVD CRA++S +F D +K+++ PLN ++R Sbjct: 28 NVKKKGFVQCGVSTGIPGFSIADSKGEYKGIDVDLCRAIASTMFGDATKVKFTPLNTQQR 87 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 F ALQS ++D+L+RNT TL R+ +LGL + Y+D QG ++ K + S +L+GA+I Sbjct: 88 FTALQSGEVDVLTRNTTVTLTRDTTLGLIGVGVNYYDSQGVMVSKDLNVKSAKELNGATI 147 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 CVQ GTTTEL LAD+F+ +++ P+V ++ +EI A+ A RCDA+T D S L + + T Sbjct: 148 CVQPGTTTELNLADWFRGQKIEFKPVVIDKYDEIIRAFSAGRCDAFTTDKSQLASTRTTL 207 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 + P + VILP+ SK PL P + QGD +W+NIV W+ AM+ AEE GIT+ N+++++K + Sbjct: 208 ENPDKFVILPEDFSKEPLGPMVRQGDEQWFNIVRWSLNAMLEAEEYGITKANVDEMAK-S 266 Query: 269 TNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNA 328 NP++QR LG+ + +G+ LG+ W Y II+++GNYGE F+ LG S +K+ RG NA Sbjct: 267 PNPNIQRILGV--TPGMGKNLGVDDKWAYNIIKNVGNYGESFENTLGKSSAMKLERGLNA 324 Query: 329 LWSKGGLMYAPPIR 342 + GGLMY P+R Sbjct: 325 SYKNGGLMYGWPVR 338 >gi|330429592|gb|AEC20926.1| putative ABC transporter periplasmic amino acid-binding protein [Pusillimonas sp. T7-7] Length = 338 Score = 310 bits (795), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 147/329 (44%), Positives = 219/329 (66%), Gaps = 4/329 (1%) Query: 15 LFFTSFSTNASILGD-IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 LFF + ++ A D +K +GF++CG +T L GF+ + G W G D+D C+A+++ +F Sbjct: 13 LFFAAATSQAGETYDAVKAKGFVQCGTHTALPGFSIADSKGVWSGIDIDLCKAIATMMFG 72 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 D +K + P+ ++RF ALQS +ID+L+RNT T+ R+ +LGL + Y+D QG ++ K Sbjct: 73 DATKFKTTPVTTQQRFTALQSGEIDVLTRNTTATMTRDTTLGLMSAGVNYYDSQGIMVSK 132 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 + G+ S +LSGA++CVQ GTTTEL LAD+F+A+N+ + P+V +E +Y A RCDA Sbjct: 133 ELGVKSAKELSGAAVCVQPGTTTELNLADWFRANNLDFKPVVINSPDEAMRSYVAGRCDA 192 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 +T D S L ++ T P +HVILP+ SK PL P + QGD +W+ +V W M+ AEE Sbjct: 193 FTTDKSGLATIRTTLANPDDHVILPEDFSKEPLGPMVRQGDDQWFMVVRWALNTMLEAEE 252 Query: 254 LGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRN 313 GIT KN++++ K ++NP++QR LG+ + +G+ LGL W Y +I+ +GNYGE F+RN Sbjct: 253 YGITSKNVDEMLK-SSNPNIQRILGV--TGEMGKGLGLDNKWAYNLIKQVGNYGESFERN 309 Query: 314 LGNQSELKIPRGYNALWSKGGLMYAPPIR 342 LG S +K+ RG NA W GGLMY PIR Sbjct: 310 LGAGSAMKLERGINAQWRDGGLMYGWPIR 338 >gi|167041376|gb|ABZ06129.1| putative bacterial extracellular solute-binding protein, family 3 [uncultured marine microorganism HF4000_005K23] Length = 348 Score = 310 bits (794), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 151/346 (43%), Positives = 214/346 (61%), Gaps = 9/346 (2%) Query: 2 YKDFFVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 +K I + +LF A+ L + K+ LKCG++ GL GF+ + A G+W Sbjct: 7 FKHLLSLIAVVAVLFALGTEAMAAKKSKTLKNTIKKDTLKCGVSQGLPGFSNMDAAGNWT 66 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G DVD CRA+++A+ D K+ ++ L+AKERF AL + +IDILSRNT WTL R+ +GL Sbjct: 67 GVDVDVCRAVAAAVLGDSGKVTFIALSAKERFTALIAGEIDILSRNTTWTLSRDADIGLT 126 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F + ++DGQGF++ K GI+S + SG S CV GTTTEL + D+F + + Y P+VF Sbjct: 127 FVGVNFYDGQGFMVRKDSGITSTNDFKSGLSACVNIGTTTELNMRDFFTSKGITYEPVVF 186 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E+ +E+ AY A RCD YT D S L A + P +H++LP+ ISK PL P + QGD Sbjct: 187 EKADEVKDAYDAGRCDTYTTDKSGLAAQRTKLANPDDHIVLPETISKEPLGPVVRQGDAV 246 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWT 296 W +IV W+ M+ AEE GI N + + K + NP ++R +G + +G ALGL DW+ Sbjct: 247 WEDIVRWSLNVMIEAEEYGINSANADSM-KTSKNPQIKRLVGAE--GELGAALGLDNDWS 303 Query: 297 YRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 RII+ +GNYGE + RN+ + L RG N LW+KGGL+Y PP R Sbjct: 304 LRIIKQVGNYGESYKRNIADTGILPT-RGPNELWTKGGLLYVPPAR 348 >gi|220910023|ref|YP_002485334.1| family 3 extracellular solute-binding protein [Cyanothece sp. PCC 7425] gi|219866634|gb|ACL46973.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7425] Length = 364 Score = 310 bits (793), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 144/316 (45%), Positives = 208/316 (65%), Gaps = 3/316 (0%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L I RG L CG++ L GF+ V G++ G DVD CRA+++A+FDDP +++ LNAK Sbjct: 52 LATILNRGQLICGVSGELPGFSFVDQQGNYAGLDVDVCRAIAAALFDDPEAVEFRNLNAK 111 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 ERF ALQ+ +IDILSRNT T+ R+ ++G+ F P+ ++DGQG ++ + GI S+ L G Sbjct: 112 ERFTALQTGEIDILSRNTTLTMSRDTAIGIQFAPVVFYDGQGIMVRNQDGIRSLKDLQGK 171 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 SIC+Q GTT E L D + + Y P++FE + + A Y RC A + D S L + + Sbjct: 172 SICLQTGTTHEQNLTDQTRKLGIDYQPVIFEDINTMFATYAQGRCQAVSADRSGLISRRT 231 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 T P+ + ILPD++SK PLAPA+ +GD W +V W Y+++ AEELGIT +NI + Sbjct: 232 TLPNPNGNEILPDVLSKEPLAPAVAKGDPTWSTVVEWIIYSLIEAEELGITTQNI-ESKL 290 Query: 267 DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGY 326 + +P ++RFLG + N+G LGL+ D+ RII+ +GNYGE++DRNLG + L + RG Sbjct: 291 QSADPTLRRFLG--REGNLGHGLGLSNDFAVRIIKGVGNYGEIYDRNLGPNTLLNLERGL 348 Query: 327 NALWSKGGLMYAPPIR 342 N WSKGGL+Y+PP R Sbjct: 349 NQQWSKGGLLYSPPFR 364 >gi|294675892|ref|YP_003576507.1| glutamate/aspartate ABC transporter periplasmic glutamate/aspartate-binding protein BztA [Rhodobacter capsulatus SB 1003] gi|294474712|gb|ADE84100.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein BztA [Rhodobacter capsulatus SB 1003] Length = 338 Score = 310 bits (793), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 149/316 (47%), Positives = 211/316 (66%), Gaps = 2/316 (0%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L D+K RG L CG N GL GFA ANG ++GFDV C+A+++A+ DP K++Y+PL + Sbjct: 25 LDDVKARGQLICGSNPGLTGFAAPDANGVYQGFDVAVCKAVAAAVLGDPMKVKYVPLTGE 84 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 RF AL S ++D+L RN+ WT R+ L L F + Y+DGQGF+++K G+SS +L GA Sbjct: 85 TRFTALASGEVDVLVRNSTWTFSRDTELALDFVAVNYYDGQGFMVNKSLGVSSAKELDGA 144 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 +ICVQ GTTTE+ LAD+FKA+NM Y P+ E + A CD+YT D S L + + Sbjct: 145 TICVQTGTTTEMNLADFFKANNMTYTPVNIADDAEGQQKFAAGACDSYTTDASGLASSRA 204 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 T ++ VILP+IISK PL P + GD W +IV W+ YA+V AEE GIT+ N+ +V+ Sbjct: 205 TLPNAADIVILPEIISKEPLGPVVRHGDNNWGDIVRWSFYALVAAEEYGITKANLEEVAA 264 Query: 267 DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGY 326 T NP+++R LG++ ++G+ +GL D+ R I GNYGE+F+ N+G + + + RG Sbjct: 265 STQNPEIRRLLGLE--GDMGKKIGLDNDFAKRAILASGNYGEVFEANIGASTSIGLARGL 322 Query: 327 NALWSKGGLMYAPPIR 342 NA W++GGLMYAPP R Sbjct: 323 NAQWTQGGLMYAPPFR 338 >gi|259416581|ref|ZP_05740501.1| glutamate/glutamine/aspartate/asparagine-binding protein bztAprecursor [Silicibacter sp. TrichCH4B] gi|259348020|gb|EEW59797.1| glutamate/glutamine/aspartate/asparagine-binding protein bztAprecursor [Silicibacter sp. TrichCH4B] Length = 335 Score = 310 bits (793), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 143/334 (42%), Positives = 212/334 (63%), Gaps = 3/334 (0%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 L + ++ ++ + A L ++K+RG L CG+ GL GFA + +G W G +V FCRAL++ Sbjct: 4 LTVALVALSAGTAMAGTLEEVKERGKLICGVYPGLPGFAFLSEDGTWMGSEVAFCRALAA 63 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 A+ DP+ ++++P +K RF AL S ++D+L+RNT WT R++ L F + Y+DGQGF Sbjct: 64 AVLKDPTAVEFVPTPSKTRFTALASGEVDVLARNTTWTFSRDVDLKFEFAGVNYYDGQGF 123 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 ++ K+ G++S +L GA++C+Q GTTTEL LAD+F+A+ + Y P+ E E Y A Sbjct: 124 LVPKELGVTSAKELDGATVCIQTGTTTELNLADFFRANGISYEPVPVETNAESQQQYLAG 183 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 CD YT D + L A + P H+ILP+ ISK PL P + GD +W ++V WT A++ Sbjct: 184 ACDVYTTDKAGLAATRSAFADPQNHLILPETISKEPLGPLVRHGDNQWGDVVRWTLNALI 243 Query: 250 TAEELGITQKNINQVSKDTT-NPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGE 308 AEELGITQ N+ ++ T NP++ R LG + + GE LGL +DW I GNYGE Sbjct: 244 IAEELGITQDNVTALAASATNNPEINRMLGTEGT--YGEMLGLDQDWAVAAISAGGNYGE 301 Query: 309 MFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +F R LG + + + RG NAL+ GG++YAPP R Sbjct: 302 IFARFLGEDTLIGLDRGLNALYRDGGILYAPPFR 335 >gi|3182934|sp|Q52663|BZTA_RHOCA RecName: Full=Glutamate/glutamine/aspartate/asparagine-binding protein BztA; Flags: Precursor gi|1655712|gb|AAB17886.1| BztA [Rhodobacter capsulatus SB 1003] Length = 338 Score = 310 bits (793), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 149/316 (47%), Positives = 211/316 (66%), Gaps = 2/316 (0%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L D+K RG L CG N GL GFA ANG ++GFDV C+A+++A+ DP K++Y+PL + Sbjct: 25 LDDVKARGQLICGSNPGLTGFAAPDANGVYQGFDVAVCKAVAAAVLGDPMKVKYVPLTGE 84 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 RF AL S ++D+L RN+ WT R+ L L F + Y+DGQGF+++K G+SS +L GA Sbjct: 85 TRFTALASGEVDVLVRNSTWTFSRDTELALDFVAVNYYDGQGFMVNKSLGVSSAKELDGA 144 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 +ICVQ GTTTE+ LAD+FKA+NM Y P+ E + A CD+YT D S L + + Sbjct: 145 TICVQTGTTTEMNLADFFKANNMTYTPVNIADDAEGQQKFAAGACDSYTTDASGLASSRA 204 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 T ++ VILP+IISK PL P + GD W +IV W+ YA+V AEE GIT+ N+ +V+ Sbjct: 205 TLPNAADIVILPEIISKEPLGPVVRHGDNNWGDIVRWSFYALVAAEEYGITKANLEEVAA 264 Query: 267 DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGY 326 T NP+++R LG++ ++G+ +GL D+ R I GNYGE+F+ N+G + + + RG Sbjct: 265 STQNPEIRRLLGLE--GDMGKKIGLDNDFAKRAILASGNYGEVFEANIGASTSIGLARGL 322 Query: 327 NALWSKGGLMYAPPIR 342 NA W++GGLMYAPP R Sbjct: 323 NAQWTQGGLMYAPPFR 338 >gi|119489532|ref|ZP_01622293.1| polar amino acid transport system substrate-binding proetin [Lyngbya sp. PCC 8106] gi|119454611|gb|EAW35758.1| polar amino acid transport system substrate-binding proetin [Lyngbya sp. PCC 8106] Length = 357 Score = 309 bits (792), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 136/321 (42%), Positives = 214/321 (66%), Gaps = 3/321 (0%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 T+ S L +K RG L CG++ G+ GF+ V NG++ G DVD C+A+++AIF+DP+ ++Y Sbjct: 40 TSQSRLDTVKSRGKLVCGVDGGIPGFSFVNENGEYSGLDVDMCKAVAAAIFNDPNAVEYR 99 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 L++ ERF AL+S ++D+LSRNT WT+ R+ S+G+ F P T++DGQG ++ + GI+S+ Sbjct: 100 NLDSTERFEALKSGEVDMLSRNTTWTITRDTSVGMEFAPTTFYDGQGMMVRRDSGITSLE 159 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 G ++CV+AGTTTEL L D + + +++ + AAY CD T D S L Sbjct: 160 DFEGRTVCVEAGTTTELNLTDNMRKAGVNSETKTYQQADPAYAAYAEGACDGMTSDKSQL 219 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 A + T P +H++L +SK PL P I D+ W+++V WT +A++ EELGI Q N+ Sbjct: 220 VARRSTLPNPDDHILLDVTMSKEPLGPVTINNDSAWFDVVKWTTFALIEGEELGINQANV 279 Query: 262 NQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELK 321 +Q+ K + P ++RFLGI+ ++G+ LGL ++ +I+ +GNYGE+++RNLG S+ + Sbjct: 280 DQL-KSSEEPTIRRFLGIE--GDLGQGLGLDNEFAANVIKQVGNYGEIYERNLGQGSQFR 336 Query: 322 IPRGYNALWSKGGLMYAPPIR 342 + RG NALW+ GGL+Y+PP R Sbjct: 337 LDRGQNALWNNGGLLYSPPFR 357 >gi|295689853|ref|YP_003593546.1| extracellular solute-binding protein family 3 [Caulobacter segnis ATCC 21756] gi|295431756|gb|ADG10928.1| extracellular solute-binding protein family 3 [Caulobacter segnis ATCC 21756] Length = 376 Score = 309 bits (791), Expect = 5e-82, Method: Compositional matrix adjust. Identities = 144/318 (45%), Positives = 207/318 (65%), Gaps = 6/318 (1%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L ++ RG+L CG+ GL+GFA G W+GFD DFCRA ++AIF ++ P ++ Sbjct: 63 LAAVRARGYLVCGVQQGLIGFAYADNTGRWRGFDTDFCRATAAAIFGRAEAARFTPTSST 122 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 ER LQ+ ++D+L RNT T R+ F + Y+DGQ F++ K G++ +QL+GA Sbjct: 123 ERLTVLQAGEVDVLWRNTSATFSRDAKFD--FSGVNYYDGQAFLVRKALGVAHAAQLNGA 180 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 IC+Q G+T+E+ L DYF+AH + Y P+VF+ ++ AAY +CD YT D+S L A + Sbjct: 181 RICIQTGSTSEMNLTDYFRAHKLTYEPVVFDTEDKARAAYGREQCDVYTADLSNLAAARA 240 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 T RP +H+ILP++ISK PL P + QGD W N+V WT AM+ AEELG+T N+ + Sbjct: 241 TLARPGDHLILPEVISKEPLGPVVRQGDDAWGNVVRWTLNAMILAEELGVTSANVEALRA 300 Query: 267 DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGY 326 + NP+++R LG + G +GL+ D+ ++IIR +GNYGE+F RNLG + LKI RG Sbjct: 301 RSDNPEIRRLLGAEP--GYGAMIGLSDDFAFQIIRQVGNYGEVFARNLGPATPLKIERGL 358 Query: 327 NALW--SKGGLMYAPPIR 342 NALW S GL+YAPP+R Sbjct: 359 NALWNASPPGLLYAPPMR 376 >gi|315499877|ref|YP_004088680.1| extracellular solute-binding protein family 3 [Asticcacaulis excentricus CB 48] gi|315417889|gb|ADU14529.1| extracellular solute-binding protein family 3 [Asticcacaulis excentricus CB 48] Length = 370 Score = 308 bits (790), Expect = 5e-82, Method: Compositional matrix adjust. Identities = 147/328 (44%), Positives = 221/328 (67%), Gaps = 4/328 (1%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 T ++++ L + RG + CG++ GL+GF+ +G W+GFDVDFCRAL++AIF D Sbjct: 45 LTPTQSDSATLKAVLARGRVSCGVHPGLIGFSYKDNSGRWRGFDVDFCRALAAAIFSDAD 104 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 K+ Y+PL ERF AL++ ++D+L R+T WTL R+ + + + I Y+DGQGF++ K Sbjct: 105 KVTYVPLTTTERFEALKTGKVDVLWRSTSWTLSRDAADQVDYAGINYYDGQGFLVRKSLR 164 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 ++S ++L+GA ICVQ G+T+EL LAD+F+A +KY+P+V + +E AY A +CDA + Sbjct: 165 LNSATELNGARICVQTGSTSELNLADFFRARGLKYNPVVVKNEDEGRDAYAAGQCDALSS 224 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 D+SAL A + T P+ H ILP+IISK PL P + QGD +W +IV WT Y + AEELG+ Sbjct: 225 DVSALAAARATLSDPTAHTILPEIISKEPLGPVVRQGDDQWTDIVRWTLYVTIVAEELGV 284 Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316 + + + ++ NP+V+R + N+G LGL +W Y I+ +GNYGE+FDRN+G Sbjct: 285 SSETVKAQQLESQNPEVRRL--LGSEGNLGGGLGLGPEWAYNILSQVGNYGEIFDRNIGA 342 Query: 317 QSELKIPRGYNALWS--KGGLMYAPPIR 342 S LK+ RG NA W+ + GL+Y+PP+R Sbjct: 343 DSPLKLSRGLNAQWNAPERGLLYSPPVR 370 >gi|218246879|ref|YP_002372250.1| family 3 extracellular solute-binding protein [Cyanothece sp. PCC 8801] gi|257059921|ref|YP_003137809.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 8802] gi|218167357|gb|ACK66094.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 8801] gi|256590087|gb|ACV00974.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 8802] Length = 363 Score = 308 bits (790), Expect = 6e-82, Method: Compositional matrix adjust. Identities = 145/326 (44%), Positives = 217/326 (66%), Gaps = 6/326 (1%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 +S + S L IK+RG L CG+N + GF+ V G + G DVD CRA+++A+FDDPSK Sbjct: 43 SSSKVSGSRLATIKERGTLICGVNGEVPGFSFVDEQGQYSGLDVDMCRAIAAALFDDPSK 102 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++Y L+A+ER A+QS ++D+L+RNT WT+ R+ ++G+ F P ++DGQG + K G Sbjct: 103 VEYRKLSAQERLTAVQSGEVDVLNRNTTWTMSRDTAVGMEFAPTVFYDGQGIMATKASGA 162 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFERVEEIDAAYRAHRCDAYTG 196 +++ L+G SICV AGTTTE LAD + + Y+P+V + V+ + AAY+ RC+A T Sbjct: 163 NTLKDLTGKSICVLAGTTTEQNLADQMRKEGVTDYNPVVSDDVDALYAAYQEGRCEAVTS 222 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 D S L A + + +HVIL ++SK PL P + GD+ WY+ V W +A++ AEE GI Sbjct: 223 DRSQLVARRSIFPKKDDHVILDVVMSKEPLGPVVADGDSTWYDAVKWITFAVIQAEEFGI 282 Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316 T +N+ + T +P+++RFLGID +GE +GL D+ RII+H+GNYGE+++RN+G Sbjct: 283 TSQNLATF-ESTEDPNIKRFLGID--DKLGEDMGLPNDFAARIIKHVGNYGEIYERNIGK 339 Query: 317 QSELKIPRGYNALWSKGGLMYAPPIR 342 L + RG N LW+ GGL+Y+PP R Sbjct: 340 --PLGLERGQNQLWTNGGLLYSPPFR 363 >gi|119510485|ref|ZP_01629618.1| extracellular solute-binding protein, family 3 [Nodularia spumigena CCY9414] gi|119464907|gb|EAW45811.1| extracellular solute-binding protein, family 3 [Nodularia spumigena CCY9414] Length = 358 Score = 308 bits (789), Expect = 9e-82, Method: Compositional matrix adjust. Identities = 148/313 (47%), Positives = 218/313 (69%), Gaps = 3/313 (0%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 IK RG L CG++ + GF+ V+ +G + G DVD CRA+++A+FD+P +++ L+A+ERF Sbjct: 49 IKSRGQLICGVSGQIPGFSFVETDGKYSGIDVDICRAIAAALFDNPDAVEFRNLSAQERF 108 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 ALQ+ +ID+LSRNT WTL R ++GL F P+ ++DGQ ++ K +GI+S++ + +IC Sbjct: 109 TALQTGEIDVLSRNTSWTLSRATAMGLEFAPVVFYDGQAIMVGKNRGINSLADMKDKAIC 168 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 VQ+GTTTE LAD + N+ Y PIVFE V A Y RCD T D SAL + ++T Sbjct: 169 VQSGTTTEQNLADQMRKRNITYKPIVFEDVNVTFATYAEGRCDGITADRSALVSRRITLP 228 Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 P +VIL ++IS PLAPA+ +GD+ + V+W Y+++ AEELGI +N+ Q + + Sbjct: 229 NPENNVILDEVISSEPLAPAVAKGDSVLGSAVTWVVYSLIKAEELGINSQNLGQFAT-SN 287 Query: 270 NPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNAL 329 +PD++RFLG + N+GE LGLT D+ RI++H+GNYGE++DRNLG ++ L +PRG N L Sbjct: 288 DPDIKRFLGTE--GNLGEGLGLTNDFAARIVKHVGNYGEIYDRNLGPKTNLNLPRGQNQL 345 Query: 330 WSKGGLMYAPPIR 342 +GGL+YAPP R Sbjct: 346 GQQGGLLYAPPFR 358 >gi|33592620|ref|NP_880264.1| putative extracellular solute-binding protein [Bordetella pertussis Tohama I] gi|33595874|ref|NP_883517.1| putative extracellular solute-binding protein [Bordetella parapertussis 12822] gi|33600404|ref|NP_887964.1| putative extracellular solute-binding protein [Bordetella bronchiseptica RB50] gi|33565953|emb|CAE36503.1| putative extracellular solute-binding protein [Bordetella parapertussis] gi|33568003|emb|CAE31916.1| putative extracellular solute-binding protein [Bordetella bronchiseptica RB50] gi|33572266|emb|CAE41818.1| putative extracellular solute-binding protein [Bordetella pertussis Tohama I] Length = 340 Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 142/317 (44%), Positives = 213/317 (67%), Gaps = 4/317 (1%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L +KK+GF++CG+ G+ GF+ + G+W+G DVD CRA+++A+F D K + L+ + Sbjct: 27 LDAVKKKGFVQCGLTDGVAGFSATNSKGEWEGMDVDICRAVAAAVFGDAGKFKGTALSTQ 86 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 +RF ALQS ++D+L R T R+ SLGLA +++DGQG ++ K G+ S +L A Sbjct: 87 QRFTALQSGEVDVLLRTVTLTQTRDTSLGLAAVAASFYDGQGVLVRKALGVKSAKELDEA 146 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 +ICVQ GTTTEL LAD+F+A+ +K+ P+V ++V E+ A+ + RCDA+T D S L A++ Sbjct: 147 TICVQPGTTTELNLADWFRANGIKFTPVVIDKVTEVVRAFESGRCDAFTDDASQLAAVRA 206 Query: 207 TN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 T +P + ILP+ SK PL P + QGD W IV WT +A++ AEE GITQ+N++++ Sbjct: 207 TQVAKPDDFEILPERFSKEPLGPMVRQGDENWLGIVRWTLFALMEAEEYGITQQNVDEML 266 Query: 266 KDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRG 325 K + NP+V R LG+ + G+ +GL + W Y I+ +GNY ++F+RN+G S L + RG Sbjct: 267 K-SKNPNVLRILGV--TPGAGKNMGLDEKWAYNAIKAVGNYSQIFERNVGKDSRLGLQRG 323 Query: 326 YNALWSKGGLMYAPPIR 342 NALWS+GG MY PIR Sbjct: 324 VNALWSQGGAMYPWPIR 340 >gi|260426367|ref|ZP_05780346.1| glutamate/glutamine/aspartate/asparagine-binding protein bztAprecursor [Citreicella sp. SE45] gi|260420859|gb|EEX14110.1| glutamate/glutamine/aspartate/asparagine-binding protein bztAprecursor [Citreicella sp. SE45] Length = 339 Score = 307 bits (787), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 145/317 (45%), Positives = 206/317 (64%), Gaps = 3/317 (0%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L D+K RG L CG++TGL GF+ ANG W+GFDV CRA+++A+ DP ++++P + Sbjct: 25 LDDVKARGSLNCGVSTGLTGFSAPDANGVWQGFDVAVCRAVAAAVLGDPMAVEFVPTTGQ 84 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 RF AL S +ID+L+RNT WT R++ L F + Y+DGQGF++ K G+SS +L GA Sbjct: 85 TRFTALASGEIDVLARNTTWTFSRDVDLKFEFIGVNYYDGQGFMVPKALGVSSAKELDGA 144 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 ++C+Q GTTTEL LAD+F+ +N+ Y P+ E E Y A CD YT D S L A + Sbjct: 145 TVCIQTGTTTELNLADFFRVNNISYEPVPIETNAEAQQQYLAGACDVYTTDASGLAATRA 204 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS- 265 + + P +HVILP+IISK PL P + GD+EW +IV WT A+V AEE G+T NI ++S Sbjct: 205 SFEAPGDHVILPEIISKEPLGPLVRHGDSEWGDIVRWTLNALVAAEEYGVTSANIGELSA 264 Query: 266 KDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRG 325 NP++ R LG + +G GL DW + I GNYGE+F++ +G + + + RG Sbjct: 265 APGNNPEINRLLGTE--GELGAMFGLEADWAKKAIMANGNYGEIFEKTIGENTPIGLSRG 322 Query: 326 YNALWSKGGLMYAPPIR 342 NA W++GGL+Y+PP R Sbjct: 323 LNAQWTEGGLLYSPPFR 339 >gi|319940740|ref|ZP_08015081.1| extracellular solute-binding protein, family 3 [Sutterella wadsworthensis 3_1_45B] gi|319805800|gb|EFW02574.1| extracellular solute-binding protein, family 3 [Sutterella wadsworthensis 3_1_45B] Length = 340 Score = 306 bits (784), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 142/319 (44%), Positives = 213/319 (66%), Gaps = 2/319 (0%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 ++L I+ L CG+NT GF+ + G W+G DV+ CR++++A+ + K++Y+PL Sbjct: 24 GAVLDKIRANDQLVCGVNTSAPGFSSADSKGHWEGLDVNLCRSVAAAVLGNADKVKYVPL 83 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 ++ + AL S QID+L+RNT WT+ R+ S G F ++Y+DGQ F++ K G+ S+ +L Sbjct: 84 SSTQHMTALASGQIDMLARNTTWTMTRDASHGNVFVAVSYYDGQAFMVPKSLGVKSLKEL 143 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 GA++CVQ GTTTE T ADYF++H M+Y +VF+ E A+ + RCDAYT D+S L Sbjct: 144 DGATVCVQTGTTTEKTTADYFRSHGMQYKTVVFDTTEATQGAFLSGRCDAYTSDMSDLAG 203 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 ++ PS+ ILP+ I+K PL PA+ +GD E++ IV W+ A + AEELG+TQ N++ Sbjct: 204 VRTVAQDPSKFDILPETITKEPLGPAVRRGDWEFFEIVRWSFMAFLNAEELGVTQANVDD 263 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 + K + +P+V R +G + ++G LGL KDW+YRII+ +GNYGE + + G S L +P Sbjct: 264 MRKTSKDPNVMRLVGTGE--DMGRMLGLDKDWSYRIIKQVGNYGESWTKYFGPTSPLNLP 321 Query: 324 RGYNALWSKGGLMYAPPIR 342 RG N LW+ GGLMYA PIR Sbjct: 322 RGMNKLWTDGGLMYAMPIR 340 >gi|126731935|ref|ZP_01747738.1| ABC transporter amino acid-binding protein [Sagittula stellata E-37] gi|126707467|gb|EBA06530.1| ABC transporter amino acid-binding protein [Sagittula stellata E-37] Length = 337 Score = 306 bits (783), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 146/316 (46%), Positives = 208/316 (65%), Gaps = 2/316 (0%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L D+K G LKCG++ GL GF+ G+W G DVD+CRAL++A+ D ++Y+ L+AK Sbjct: 24 LDDVKAAGSLKCGVSQGLPGFSATNDAGEWTGIDVDYCRALAAAVLGDADAVEYVSLSAK 83 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 +RF AL S +ID+LSRNT WT+ R+ LG+ F + Y+DGQG ++ GI+S +L GA Sbjct: 84 DRFTALSSGEIDVLSRNTTWTITRDTDLGITFVGVNYYDGQGMMVPAGLGITSALELDGA 143 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 +IC GTTTEL + DYF H+M + + E +E+ AAY A RCD +T D S + A +L Sbjct: 144 TICTNTGTTTELNITDYFTQHDMSFELVALENSDEVIAAYGAGRCDVFTTDRSGVAAERL 203 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 P HV+LP+ ISK PL P++ GD +W + W ++ AEE GIT +N++++ Sbjct: 204 KLADPDAHVVLPETISKEPLGPSVRAGDEQWMKVAKWVLNGVIEAEEYGITSENVDEM-L 262 Query: 267 DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGY 326 ++ NP VQR LG ++ G LGL D+ Y+ ++ +GNYGEM+DRN+G + LK+ RG Sbjct: 263 ESENPSVQRILGA-GDNDYGAPLGLGADFVYQAVKQVGNYGEMYDRNVGPDTPLKLERGV 321 Query: 327 NALWSKGGLMYAPPIR 342 N LW+KGG MYAPPIR Sbjct: 322 NNLWNKGGFMYAPPIR 337 >gi|218437710|ref|YP_002376039.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7424] gi|218170438|gb|ACK69171.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7424] Length = 362 Score = 306 bits (783), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 143/326 (43%), Positives = 213/326 (65%), Gaps = 6/326 (1%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 TS S S L +K RG + CGIN + GF+ V G + G DVD CRA+++A+FDDP+K Sbjct: 42 TSTSGGTSRLDTVKARGTVICGINGEVPGFSFVDEQGQYSGLDVDMCRAVAAALFDDPTK 101 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 +++ L A +RF A+QS ++DIL+RNT WT+ R+ S+G+ F P T++DGQG ++ K GI Sbjct: 102 VEFRKLTADQRFTAVQSGEVDILNRNTTWTISRDTSVGMDFAPTTFYDGQGIMVTKASGI 161 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMK-YHPIVFERVEEIDAAYRAHRCDAYTG 196 + + L G S+CV +GTTTE LAD + ++ Y PI + V+++ AAY+ RC+ T Sbjct: 162 TKLEDLKGKSVCVLSGTTTEQNLADQMRKRGIEDYTPIASDDVDQLYAAYQEGRCEGVTS 221 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 D S L A + +P +HV+L ++SK PL P + GD++W + + W YA + AEELGI Sbjct: 222 DRSQLVARRSVLPKPEDHVVLDVVLSKEPLGPVVADGDSQWSDTIKWITYATIEAEELGI 281 Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316 +NI + K + +P+V+RFLG +GE +GL D+ R+I+H+GNY E++DRN+G Sbjct: 282 NSQNIGEFEK-SEDPNVKRFLG--SEGTLGEDMGLNNDFATRVIKHVGNYEEIYDRNIGK 338 Query: 317 QSELKIPRGYNALWSKGGLMYAPPIR 342 L + RG N LW+ GGL+Y+PP R Sbjct: 339 --PLGLERGPNQLWTNGGLLYSPPFR 362 >gi|296535903|ref|ZP_06898057.1| amino-acid ABC superfamily ATP binding cassette transporter, substrate-binding protein [Roseomonas cervicalis ATCC 49957] gi|296263760|gb|EFH10231.1| amino-acid ABC superfamily ATP binding cassette transporter, substrate-binding protein [Roseomonas cervicalis ATCC 49957] Length = 325 Score = 305 bits (782), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 144/316 (45%), Positives = 212/316 (67%), Gaps = 4/316 (1%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L ++ + L C N G GF + G+ +G D D CRA+++A+ ++I++ L + Sbjct: 14 LAAVRAKALLDCSANQGSPGFGVPDSRGEQQGLDPDICRAVAAAVLGPNARIRWTVLTSA 73 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 R ALQS Q+DI++R WT RE++ GL F ++DGQGFI+ K G++ +QL GA Sbjct: 74 TRVTALQSGQVDIVARTFTWTHAREVNAGLQFASPVFYDGQGFIVPKASGVTRAAQLDGA 133 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 SICV AG+T EL LAD+ +++ ++ +P+VFE E+ AY + RCDAYT D S L Sbjct: 134 SICVTAGSTNELNLADWARSNGLRVNPVVFEGNEDTRKAYTSGRCDAYTLDASQLAGFAT 193 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 T R EHVIL DIISK PL+PA+ +GD +WY+IV WT +A++ AEE GITQ N++ + Sbjct: 194 TLPR-GEHVILSDIISKEPLSPAVRKGDAQWYDIVRWTIFALILAEEHGITQANVDSM-L 251 Query: 267 DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGY 326 ++ NP+V+R LG+ + + G A+GL + W Y I+ +GNYGE+F+R+LG +S L + RG Sbjct: 252 ESQNPEVRRLLGV--AGDHGPAMGLDRRWAYNAIKAVGNYGEIFERHLGAESPLGLERGL 309 Query: 327 NALWSKGGLMYAPPIR 342 NALW++GGL+YAPP+R Sbjct: 310 NALWNRGGLLYAPPMR 325 >gi|254707031|ref|ZP_05168859.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella pinnipedialis M163/99/10] Length = 251 Score = 305 bits (781), Expect = 6e-81, Method: Compositional matrix adjust. Identities = 141/252 (55%), Positives = 188/252 (74%), Gaps = 3/252 (1%) Query: 93 QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICV 150 QS ++D+L RNT WT+ R+ SLGL F I Y+DGQGF+++ KK GI+S QLSGASICV Sbjct: 1 QSGEVDVLIRNTTWTISRDTSLGLDFAGINYYDGQGFMINSKKLAGINSALQLSGASICV 60 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 QAGTTTEL +ADYF+A+ M+Y+P+VFE++EE +AAY + RCDAYT D S+LY ++L Sbjct: 61 QAGTTTELNMADYFRANKMEYNPVVFEKIEEANAAYDSGRCDAYTTDQSSLYGVRLALAN 120 Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 P +HVILP+IISK P + QGD W ++V WTH A++ AEE GITQ N+ ++ K + N Sbjct: 121 PDDHVILPEIISKEPFGLTVRQGDARWADVVRWTHNALLNAEEYGITQANVEEMKK-SDN 179 Query: 271 PDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALW 330 PD++R LG + + IG LGL KDW +II+ +GNYGE+F+RN+G+ S LKI RG NA W Sbjct: 180 PDIKRLLGAEADTKIGTDLGLDKDWVVKIIKGVGNYGEIFERNIGSGSPLKIARGLNAQW 239 Query: 331 SKGGLMYAPPIR 342 +KGGL Y P+R Sbjct: 240 NKGGLQYGIPVR 251 >gi|114766874|ref|ZP_01445796.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Pelagibaca bermudensis HTCC2601] gi|114540920|gb|EAU43980.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Roseovarius sp. HTCC2601] Length = 339 Score = 303 bits (776), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 144/317 (45%), Positives = 205/317 (64%), Gaps = 3/317 (0%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L D+K RG L CG++TGL GF+ ANG W+GFDV CRA+++A+ DP ++++ + Sbjct: 25 LDDVKARGNLNCGVSTGLTGFSAPDANGVWQGFDVAVCRAVAAAVLGDPMAVEFVSTTGQ 84 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 RF AL S +ID+L+RNT WT R+ L F + Y+DGQGF++ K+ G+SS +L GA Sbjct: 85 TRFTALASGEIDMLARNTTWTFSRDNDLKFEFVGVNYYDGQGFMIPKELGVSSAKELDGA 144 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 ++C+Q GTTTEL LAD+F+ +N+ Y P+ E E Y A CD YT D S L A + Sbjct: 145 TVCIQTGTTTELNLADFFRVNNINYEPVPIETNAEAQQQYLAGACDVYTTDASGLAATRA 204 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 + + P +HVILP+IISK PL P + GD EW +I WT A++ AEE G+T NI ++S Sbjct: 205 SFETPGDHVILPEIISKEPLGPLVRHGDNEWGDIARWTLNALIAAEEYGVTSANIEELSS 264 Query: 267 -DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRG 325 T NP++ R LG + +G +GL DW + I GNYGE+F++ +G + + + RG Sbjct: 265 APTDNPEINRLLGTE--GELGAMIGLEADWAKKAIMANGNYGEIFEKTIGENTPIGLSRG 322 Query: 326 YNALWSKGGLMYAPPIR 342 NA W++GGLMY+PP R Sbjct: 323 LNAQWTEGGLMYSPPFR 339 >gi|86605966|ref|YP_474729.1| polar amino acid ABC transporter amino acid-binding protein [Synechococcus sp. JA-3-3Ab] gi|86608412|ref|YP_477174.1| polar amino acid ABC transporter periplasmic amino acid-binding protein [Synechococcus sp. JA-2-3B'a(2-13)] gi|86554508|gb|ABC99466.1| polar amino amino acid ABC transporter (PAAT) family, amino acid-binding protein [Synechococcus sp. JA-3-3Ab] gi|86556954|gb|ABD01911.1| polar amino amino acid ABC transporter (PAAT) family, periplasmic amino acid-binding protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 345 Score = 303 bits (776), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 145/313 (46%), Positives = 208/313 (66%), Gaps = 6/313 (1%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 IK RG L CG+N L GF + G + GFD+D CRA+++A+F DP K++Y+ L A R Sbjct: 39 IKARGELICGVNNQLPGFGNLDDQGKYVGFDIDICRAVAAALFGDPDKVRYVYLTAANRQ 98 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 A+QS ++D++SRNT WTL R+ + F P TY+DGQGF++ K G+ + L+GA+IC Sbjct: 99 SAIQSGEVDMISRNTTWTLTRDREWAVTFGPTTYYDGQGFMVRKSLGVEKLEDLNGATIC 158 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V AGTTTEL LAD F+A + + P+ F+ + AY RCDA T D SAL + + + Sbjct: 159 VIAGTTTELNLADTFRARGIAFTPVTFDGDDSSFNAYEEGRCDAITSDQSALISRRASLA 218 Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 P +HVILP++ISK PL P + GD + +I++WT YA+ AEE GIT N+++ K + Sbjct: 219 SPDDHVILPEVISKEPLGPLVPHGDESFSDIMNWTVYALFYAEEKGITSANVDEFLK-SE 277 Query: 270 NPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNAL 329 +PD++RFLG + N+GE LGL DW +I+ +GNYGE+F+R+L + L +PRG N Sbjct: 278 DPDIRRFLG--QEGNLGELLGLKPDWVVNVIKAVGNYGEIFNRHL---TPLGVPRGLNQP 332 Query: 330 WSKGGLMYAPPIR 342 ++KGG+ YAPP R Sbjct: 333 YTKGGIQYAPPFR 345 >gi|296536952|ref|ZP_06898974.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Roseomonas cervicalis ATCC 49957] gi|296262721|gb|EFH09324.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Roseomonas cervicalis ATCC 49957] Length = 338 Score = 303 bits (775), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 135/322 (41%), Positives = 214/322 (66%), Gaps = 7/322 (2%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 + + L ++ RG L CG++ GFA + G+ +G + DFCRA+++A D +++++ Sbjct: 23 SGSPTLDAVRARGQLACGVSGTNPGFALADSRGEMRGSEADFCRAVAAATLGDAGRVKFV 82 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 L + RF ALQS +ID+L R W+L RE SLGL F IT+ DG F++H G+ S + Sbjct: 83 VLTSTNRFTALQSGEIDLLVRTATWSLGREASLGLLFAGITFHDGTAFMVHAASGVRSAA 142 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 +L GA+IC+ GTTTEL + DYF+ M++ P++ + V E+ AA+R+ RCD+Y+ D SAL Sbjct: 143 ELDGATICILPGTTTELAVTDYFRRGGMRFTPVLIDNVTELRAAFRSGRCDSYSSDASAL 202 Query: 202 YALKLTNDRPS-EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 + + + ++ +LP++ISK PL P + +GD +W++IV WTH+AM+ AEELGI + Sbjct: 203 ASFRFGEGAGAGQYALLPEVISKEPLGPLVRKGDDKWFDIVRWTHFAMLAAEELGIRGAD 262 Query: 261 INQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSEL 320 + + + NPD++R LG+D ++G A+GL W + I+R +GNY E++DRN+ + L Sbjct: 263 A-EAALASPNPDIRRLLGVD--GDLGRAMGLDNRWAFNILRQVGNYAEVWDRNI---APL 316 Query: 321 KIPRGYNALWSKGGLMYAPPIR 342 +PRG+N +W++GGL YAPPIR Sbjct: 317 GVPRGHNRIWTQGGLQYAPPIR 338 >gi|254466846|ref|ZP_05080257.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Rhodobacterales bacterium Y4I] gi|206687754|gb|EDZ48236.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Rhodobacterales bacterium Y4I] Length = 337 Score = 301 bits (772), Expect = 6e-80, Method: Compositional matrix adjust. Identities = 139/322 (43%), Positives = 208/322 (64%), Gaps = 4/322 (1%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 S +A L D++ G L CG++ G+ GF+ + G W G D D CRA+++A D + +++ Sbjct: 20 SAHAGKLEDVRAAGELACGVSEGVPGFSNPNSEGVWTGLDADICRAVAAATLGDANAVRF 79 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +PL +K++ LA+ S Q+D+ SR T WT+ R+ + G+ F + Y+DGQGF++ G++S Sbjct: 80 VPLASKQKVLAVSSGQVDMTSRTTTWTMKRDSAEGVDFTSVVYYDGQGFMVRADAGVTSA 139 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 +L A++C+ GTTTEL +AD+ +A+ + P+VFE E AY + RCDA T D S Sbjct: 140 KELDAATVCLTTGTTTELNMADFARANGLTLEPVVFEGKREAVEAYASGRCDALTTDASQ 199 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L A + PS+H ILP+IISK PLAP + GD +W ++V+W Y ++TAEELG+TQ N Sbjct: 200 LAAFRAGFANPSDHKILPEIISKEPLAPFVAHGDNQWKDVVTWVVYGLITAEELGVTQAN 259 Query: 261 INQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSEL 320 + ++ + NPDVQR LG S + G LGL+ W I +GNYGE+++RNL + L Sbjct: 260 VADMAASSANPDVQRLLG--ASGDTGGLLGLSNTWMADAISAIGNYGEIYERNL--TATL 315 Query: 321 KIPRGYNALWSKGGLMYAPPIR 342 + RG NALWS GG++YA P+R Sbjct: 316 GLERGVNALWSDGGILYAMPVR 337 >gi|67922406|ref|ZP_00515917.1| extracellular solute-binding protein, family 3 [Crocosphaera watsonii WH 8501] gi|67855750|gb|EAM50998.1| extracellular solute-binding protein, family 3 [Crocosphaera watsonii WH 8501] Length = 350 Score = 301 bits (771), Expect = 9e-80, Method: Compositional matrix adjust. Identities = 143/352 (40%), Positives = 226/352 (64%), Gaps = 17/352 (4%) Query: 3 KDFFVSILCLIILFFTSFS-----------TNASILGDIKKRGFLKCGINTGLVGFAEVK 51 K +F+ I L+ + T+ T++S L IK+RG L CG+N + GF+ V Sbjct: 4 KPYFILIALLLTMPLTACGGGSQTSDNPTPTSSSRLDTIKQRGTLICGVNGEVPGFSFVD 63 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 NG + G DVD CRA+++A+FDDP K++Y L+A+ERF A+QS ++D+L+RNT WT+ R+ Sbjct: 64 ENGQYSGLDVDVCRAIAAALFDDPEKVEYRKLSAQERFPAVQSGEVDVLNRNTTWTISRD 123 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM-K 170 + G+ F P ++DGQG ++ G++ + L+G SICV AGTTTE LAD + + Sbjct: 124 TTNGMEFAPTIFYDGQGIMVTTASGVTDIQGLAGKSICVLAGTTTEQNLADQMRKKGITD 183 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 Y+P+ F+ V+ + AAY+ RC+ T D S L A + ++H IL ++SK PL PA+ Sbjct: 184 YNPVTFDDVDALYAAYQQGRCEGVTADRSQLVARRSILPNSNDHNILNVVLSKEPLGPAV 243 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALG 290 D++W++ V W ++++ AEE GI +N+ K + +P+++RFLG+D +GE +G Sbjct: 244 KNNDSDWFDAVKWITFSLIQAEEFGINSENLATFEK-SEDPNIRRFLGLDDK--LGEGIG 300 Query: 291 LTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 L D+ R+++H+GNYGE++DRN+G L + RG N LW++GGL+Y+PP R Sbjct: 301 LPNDFASRVVKHVGNYGEVYDRNIG--KPLGLERGPNQLWTEGGLLYSPPFR 350 >gi|126659578|ref|ZP_01730709.1| extracellular solute-binding protein, family 3 [Cyanothece sp. CCY0110] gi|126619121|gb|EAZ89859.1| extracellular solute-binding protein, family 3 [Cyanothece sp. CCY0110] Length = 334 Score = 301 bits (771), Expect = 9e-80, Method: Compositional matrix adjust. Identities = 143/328 (43%), Positives = 219/328 (66%), Gaps = 8/328 (2%) Query: 18 TSFSTNASI--LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 TS T AS L IK+RG L CG+N + GF+ V NG + G DVD CRA+++A+FDDP Sbjct: 12 TSDPTTASTSRLDTIKQRGTLICGVNGEVPGFSFVDENGQYSGLDVDICRAIAAALFDDP 71 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 K++Y L+A+ERF A+QS ++D+L+RNT WT+ R+ + G+ F P ++DGQG ++ Sbjct: 72 EKVEYRKLSAQERFPAVQSGEVDVLNRNTTWTISRDTTNGMEFAPTVFYDGQGIMVTTAS 131 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMK-YHPIVFERVEEIDAAYRAHRCDAY 194 G++++ L+G SICV AGTTTE LAD + ++ Y+P+ FE V+ + AAY+ RC+ Sbjct: 132 GVANMEGLAGKSICVLAGTTTEQNLADQMRKRGIEDYNPVTFEDVDALYAAYQEGRCEGV 191 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 T D S L A + ++H IL ++SK PL PA+ D+ W++ V W ++++ AEEL Sbjct: 192 TADRSQLVARRSILPNRNDHAILNVVLSKEPLGPAVKNNDSAWFDAVKWITFSLIQAEEL 251 Query: 255 GITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNL 314 GI +NI + + + +P+V+RFLG+D +GE +GL D+ R ++H+GNYGE+++RN+ Sbjct: 252 GINSENI-ETFETSEDPNVRRFLGLDDK--LGEGMGLPNDFAARAVKHVGNYGEVYERNI 308 Query: 315 GNQSELKIPRGYNALWSKGGLMYAPPIR 342 G L + RG N LW++GGL+Y+PP R Sbjct: 309 G--EPLGLDRGQNNLWTEGGLLYSPPFR 334 >gi|254417720|ref|ZP_05031444.1| hypothetical protein BBAL3_30 [Brevundimonas sp. BAL3] gi|196183897|gb|EDX78873.1| hypothetical protein BBAL3_30 [Brevundimonas sp. BAL3] Length = 356 Score = 300 bits (769), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 138/315 (43%), Positives = 199/315 (63%), Gaps = 4/315 (1%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 +K+RG L CG++ GLVGFA G W+GFD DFCRA+++AIF D + ++++PL+A +RF Sbjct: 44 VKRRGRLNCGVHQGLVGFAYTDNRGQWRGFDADFCRAMAAAIFGDGNAVRFVPLSASDRF 103 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 AL+ ++D+L RN+ WT+ R+ G F I Y+DGQGF++ + ++S ++L+GA IC Sbjct: 104 AALKEGRVDVLWRNSSWTMSRDAGEGFVFAGINYYDGQGFLVRRSLSLASATELNGARIC 163 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 VQAG+T + D+F++ + Y P+V E AY CDA + DISAL A + Sbjct: 164 VQAGSTAQANADDFFRSRGIAYRPVVLPSEEAARDAYGREDCDALSADISALAAARTVLA 223 Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 H IL D++SK PL P + GD W ++V WT A+V AEE G+TQ+N +SK + Sbjct: 224 DSQAHTILSDVVSKEPLGPVVRAGDERWADVVRWTLNAVVLAEEFGVTQENAEALSKTSN 283 Query: 270 NPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNAL 329 +P ++R LG G LGL+ DW I +GNYG++FDRNLG+QS L + RG NA Sbjct: 284 DPRIKRLLG--SEGEYGALLGLSDDWAKDAILSVGNYGQIFDRNLGSQSPLDLARGLNAQ 341 Query: 330 WSK--GGLMYAPPIR 342 W+ GL+Y PIR Sbjct: 342 WNARPAGLIYGLPIR 356 >gi|261314499|ref|ZP_05953696.1| cationic amino acid ABC transporter [Brucella pinnipedialis M163/99/10] gi|261303525|gb|EEY07022.1| cationic amino acid ABC transporter [Brucella pinnipedialis M163/99/10] Length = 247 Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 139/248 (56%), Positives = 185/248 (74%), Gaps = 3/248 (1%) Query: 97 IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGT 154 +D+L RNT WT+ R+ SLGL F I Y+DGQGF+++ KK GI+S QLSGASICVQAGT Sbjct: 1 MDVLIRNTTWTISRDTSLGLDFAGINYYDGQGFMINSKKLAGINSALQLSGASICVQAGT 60 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 TTEL +ADYF+A+ M+Y+P+VFE++EE +AAY + RCDAYT D S+LY ++L P +H Sbjct: 61 TTELNMADYFRANKMEYNPVVFEKIEEANAAYDSGRCDAYTTDQSSLYGVRLALANPDDH 120 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 VILP+IISK P + QGD W ++V WTH A++ AEE GITQ N+ ++ K + NPD++ Sbjct: 121 VILPEIISKEPFGLTVRQGDARWADVVRWTHNALLNAEEYGITQANVEEMKK-SDNPDIK 179 Query: 275 RFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGG 334 R LG + + IG LGL KDW +II+ +GNYGE+F+RN+G+ S LKI RG NA W+KGG Sbjct: 180 RLLGAEADTKIGTDLGLDKDWVVKIIKGVGNYGEIFERNIGSGSPLKIARGLNAQWNKGG 239 Query: 335 LMYAPPIR 342 L Y P+R Sbjct: 240 LQYGIPVR 247 >gi|56697221|ref|YP_167586.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Ruegeria pomeroyi DSS-3] gi|56678958|gb|AAV95624.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Ruegeria pomeroyi DSS-3] Length = 337 Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 138/316 (43%), Positives = 206/316 (65%), Gaps = 4/316 (1%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L D++ G L CG++ G+ GF+ + G W G D D CRA+++A D + ++++PL +K Sbjct: 26 LDDVRAAGELACGVSEGVPGFSNPNSEGVWTGLDADICRAVAAATLGDANAVRFVPLASK 85 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 ++ LA+ S Q+D+ SR T WT+ R+ + G+ F + Y+DGQGF++ G++S +L A Sbjct: 86 QKVLAVSSGQVDMTSRTTTWTMKRDSAEGVDFTSVVYYDGQGFMVRADAGVTSARELDAA 145 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 ++C+ GTTTEL +AD+ +A+ + P+VFE E AY + RCDA T D S L A + Sbjct: 146 TVCLTTGTTTELNMADFARANGLTLEPVVFEGKREAVEAYASGRCDALTTDASQLAAFRA 205 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 PSEH ILP+IISK PLAP + GD +W +IV+W Y ++TAEELG+TQ N+ +++ Sbjct: 206 GFADPSEHKILPEIISKEPLAPFVAHGDNQWKDIVTWVVYGLITAEELGVTQANVAEMTA 265 Query: 267 DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGY 326 +TNP++QR LG S + G LGL W I +GNYGE++DRNL + L + RG Sbjct: 266 SSTNPNIQRLLG--TSGDTGGFLGLNSTWMVDTISAVGNYGEIYDRNL--TATLGLERGV 321 Query: 327 NALWSKGGLMYAPPIR 342 NALW+ GG++YA P+R Sbjct: 322 NALWTDGGILYAMPVR 337 >gi|307152419|ref|YP_003887803.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7822] gi|306982647|gb|ADN14528.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7822] Length = 356 Score = 300 bits (767), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 140/319 (43%), Positives = 213/319 (66%), Gaps = 6/319 (1%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L IK RG L CG+N + GF+ V G ++G DVD CRA+++A+FDDP+K+++ L Sbjct: 43 SRLDTIKARGTLICGVNGEVPGFSFVDEKGQFEGLDVDMCRAVAAALFDDPNKVEFRKLT 102 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 A++RF A+QS ++DIL+RNT WTL R+ S G+ F P T++DGQG ++ K GI+ + L Sbjct: 103 AEQRFTAVQSGEVDILNRNTTWTLSRDTSTGMEFGPTTFYDGQGMMVTKASGITKLEDLK 162 Query: 145 GASICVQAGTTTELTLADYFKAHNM-KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 G SICV +GTTTE LAD + + Y P+ + V+++ AAY+ RC+ T D S L A Sbjct: 163 GKSICVLSGTTTEQNLADQMRKRGVTAYTPVASDDVDQLYAAYQEGRCEGITSDRSQLVA 222 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 + +P +H++L ++SK PL + GD++W++ V W YA++ EELGI KNI Sbjct: 223 RRSVLPKPQDHIVLDVVMSKEPLGTLVADGDSKWFDTVKWITYAVIEGEELGINSKNIAN 282 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 K + +P+V+RFLG++ + +G+ +GL D+ R+I+H+GNYGE+++RN+G L + Sbjct: 283 FDK-SQDPNVRRFLGLEGT--LGQDMGLPNDFAARVIKHVGNYGEIYERNIG--KPLGLE 337 Query: 324 RGYNALWSKGGLMYAPPIR 342 RG N LW+ GGL+Y+PP R Sbjct: 338 RGPNRLWTNGGLLYSPPFR 356 >gi|313680184|ref|YP_004057923.1| amino acid ABC transporter substrate-binding protein, paat family [Oceanithermus profundus DSM 14977] gi|313152899|gb|ADR36750.1| amino acid ABC transporter substrate-binding protein, PAAT family [Oceanithermus profundus DSM 14977] Length = 339 Score = 300 bits (767), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 146/316 (46%), Positives = 210/316 (66%), Gaps = 6/316 (1%) Query: 30 IKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 +K+RG L CG+N G GF + + GD+ GFDVDFCRA+++AIFDDP+K+ ++PLNAK R Sbjct: 27 VKQRGKLICGVNGGAPGFGFIDEKTGDYVGFDVDFCRAVAAAIFDDPTKVDFVPLNAKVR 86 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 F A+Q+ ++D++ RNT T R+ LG+ F P+ ++DGQG ++ K G+ SV L GA++ Sbjct: 87 FNAIQTGKVDVVFRNTTVTTSRDSQLGVDFLPVNFYDGQGVMVKKSLGVKSVYDLKGATV 146 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 C AGTTTE D +AHN+ + F+ + A + RCDA T D S L K + Sbjct: 147 CTNAGTTTEKNWTDVDRAHNLGTKLLTFDDFSKSMAGLESGRCDAVTTDKSGLVGWKAKS 206 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 P VILP+ +SK PLA Q D++W + ++W YA + AEE GITQ N++Q+ K + Sbjct: 207 KDPESLVILPETLSKEPLAGFTFQNDSKWRDALTWIVYATMQAEEFGITQANLDQMLK-S 265 Query: 269 TNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR--GY 326 +NP ++RFLG++ S +GE LGLT D+ R+IRH+GNYGE++ R+LG S IPR Sbjct: 266 SNPGIRRFLGVE--SKLGEGLGLTNDFAARVIRHVGNYGEIYARHLGPDSPFFIPREGSL 323 Query: 327 NALWSKGGLMYAPPIR 342 NAL++ GGL+Y+PP R Sbjct: 324 NALYTDGGLIYSPPFR 339 >gi|172037183|ref|YP_001803684.1| extracellular solute-binding protein [Cyanothece sp. ATCC 51142] gi|171698637|gb|ACB51618.1| extracellular solute-binding protein, family 3 [Cyanothece sp. ATCC 51142] Length = 349 Score = 300 bits (767), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 139/323 (43%), Positives = 215/323 (66%), Gaps = 6/323 (1%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + S L IK+RG L CG+N + GF+ V NG + G DVD CRA+++A+FDDP K++Y Sbjct: 32 TATTSRLDTIKQRGTLICGVNGEVPGFSFVDENGQYSGLDVDICRAIAAALFDDPEKVEY 91 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 L+A+ERF A+QS ++D+L+RNT WT+ R+ + G+ F P ++DGQG ++ G++ + Sbjct: 92 RKLSAQERFPAVQSGEVDVLNRNTTWTISRDTTNGMEFAPTVFYDGQGIMVTTASGVADM 151 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMK-YHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L+G SICV AGTTTE LAD + ++ Y+P+ FE V+ + AAY+ RC+ T D S Sbjct: 152 EGLAGKSICVLAGTTTEQNLADQMRKRGIEDYNPVTFEDVDALYAAYQEGRCEGVTADRS 211 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L A + ++H IL ++SK PL PA+ D+ W++ V W ++++ AEELGI + Sbjct: 212 QLVARRSILPNRNDHAILNVVLSKEPLGPAVKNNDSAWFDAVKWITFSLIQAEELGINSQ 271 Query: 260 NINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSE 319 NI + + +P+V+RFLG+D +GE +GL D+ R+++H+GNYGE+++RN+G Sbjct: 272 NI-ATFETSEDPNVRRFLGLD--DKLGEGMGLPNDFAARVVKHVGNYGEVYERNIG--EP 326 Query: 320 LKIPRGYNALWSKGGLMYAPPIR 342 L + RG N LW++GGL+Y+PP R Sbjct: 327 LGLDRGPNNLWTEGGLLYSPPFR 349 >gi|317405314|gb|EFV85638.1| amino acid-binding periplasmic protein [Achromobacter xylosoxidans C54] Length = 341 Score = 299 bits (766), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 141/314 (44%), Positives = 202/314 (64%), Gaps = 4/314 (1%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 IKKRG L CG++ G G + G W G D D CRAL++A+ DP K +++PL++++RF Sbjct: 31 IKKRGELVCGVSQGSAGLSIADKQGRWTGLDADLCRALAAAVLGDPEKTRFVPLSSQQRF 90 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 ALQ +ID+L+RNT T R+ LG+ I ++DGQGF++ KK G+ S ++L GA +C Sbjct: 91 PALQGGEIDVLNRNTTITSSRDAGLGIVSAGIVFYDGQGFLVPKKLGVKSATELDGAQVC 150 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL-YALKLTN 208 VQ GT E L DYFK H + Y P+V E + E++ A+ A RCD Y D S L + Sbjct: 151 VQPGTVNEQNLVDYFKKHKLNYRPVVIENLVELEQAFYAGRCDVYLSDASTLAASRAARA 210 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 P + VILP+ I+KSPL P + Q D W IV WT A+V AEELGIT +N++ ++ + Sbjct: 211 ANPDDFVILPERINKSPLGPFVRQDDPNWTAIVRWTVNALVAAEELGITSRNVDSQAQ-S 269 Query: 269 TNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNA 328 ++ V+R LG+D IG+ GL + W +IR +GNYGE++DRNLG + LK+ RG N Sbjct: 270 SDAQVRRLLGLDPG--IGKGFGLDEGWARNVIRAVGNYGEVWDRNLGAATPLKLDRGLNR 327 Query: 329 LWSKGGLMYAPPIR 342 W++GGL+Y+PP + Sbjct: 328 QWNQGGLLYSPPFQ 341 >gi|114771237|ref|ZP_01448657.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [alpha proteobacterium HTCC2255] gi|114548162|gb|EAU51049.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [alpha proteobacterium HTCC2255] Length = 339 Score = 299 bits (765), Expect = 5e-79, Method: Compositional matrix adjust. Identities = 143/317 (45%), Positives = 204/317 (64%), Gaps = 3/317 (0%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L D++ G LKCG+ TGL GFA ANG W GFDV CRA+++A+ D + ++++P K Sbjct: 25 LEDVQAAGELKCGVTTGLAGFALADANGVWDGFDVAVCRAVAAAVLGDGNAVKFVPTTGK 84 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 RF AL S +ID+L+RNT WT R++ L F + Y+DGQGF+ K G+SS L GA Sbjct: 85 TRFTALASGEIDLLARNTTWTFSRDVDLKFEFVGVNYYDGQGFMAPKALGVSSAKDLDGA 144 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 ++C+Q GTTTEL LAD+F+++N+ Y P+ E E A Y A CD +T D S L + + Sbjct: 145 TVCIQTGTTTELNLADFFRSNNISYEPVPIETNAEAQAQYLAGACDVFTTDASGLASTRA 204 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 T + P +H++LP+I+SK PL P + GD W +I WT A++TAEELG+T N+ + + Sbjct: 205 TFENPDDHIVLPEIVSKEPLGPLVRHGDNNWGDIARWTLNALITAEELGVTSANVAEHTA 264 Query: 267 DT-TNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRG 325 + NP+V R LG + ++G LGL K W R I GNYGE+F++N+G + + I RG Sbjct: 265 NAGNNPEVNRLLGTE--GDLGGMLGLDKQWASRAIAVNGNYGEIFEKNIGVNTPIGIARG 322 Query: 326 YNALWSKGGLMYAPPIR 342 NA W+ GGL+Y+ P R Sbjct: 323 LNASWTNGGLIYSAPFR 339 >gi|254424681|ref|ZP_05038399.1| hypothetical protein S7335_4841 [Synechococcus sp. PCC 7335] gi|196192170|gb|EDX87134.1| hypothetical protein S7335_4841 [Synechococcus sp. PCC 7335] Length = 350 Score = 298 bits (763), Expect = 9e-79, Method: Compositional matrix adjust. Identities = 140/324 (43%), Positives = 209/324 (64%), Gaps = 3/324 (0%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 + ++ S L + RG L CG++ G+ GF+ V+A G + G DVD C+A+++A+FDDP ++ Sbjct: 30 AVGSSGSRLQTVLDRGELICGVDGGIPGFSFVEA-GAYSGLDVDVCKAVAAALFDDPEQV 88 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 Y L++ ERF AL+ ++D+LSRNT WTL R+ S+G+ F P T++DGQG ++ + GI+ Sbjct: 89 VYRNLDSTERFEALKGGEVDMLSRNTTWTLSRDTSVGMEFGPTTFYDGQGMLVREADGIA 148 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 +S G S+CV+AGTTTEL LAD + + + P F+ + AAY A C+ T D Sbjct: 149 ELSDFEGRSVCVEAGTTTELNLADQMRQLGVSFEPQTFQDADAAYAAYEAGSCEGMTSDK 208 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 S L A + T P EHV+L +SK PL P I D+ W++ V W YA++ EELG+T Sbjct: 209 SQLIARRSTLTNPDEHVLLDVTMSKEPLGPLTINNDSAWFDTVKWVTYALIEGEELGLTS 268 Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318 +NI + T +P ++RF G + +G +GL D+ R I+H+GNYGE+++RNLG S Sbjct: 269 ENIEETVASTEDPTIRRFAG--EEGTLGSDMGLPNDFALRAIKHVGNYGEIYERNLGEGS 326 Query: 319 ELKIPRGYNALWSKGGLMYAPPIR 342 + + RG NALWS+GGL+Y+PP R Sbjct: 327 QFALARGQNALWSEGGLLYSPPFR 350 >gi|87120913|ref|ZP_01076805.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Marinomonas sp. MED121] gi|86163751|gb|EAQ65024.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Marinomonas sp. MED121] Length = 325 Score = 298 bits (762), Expect = 9e-79, Method: Compositional matrix adjust. Identities = 138/319 (43%), Positives = 205/319 (64%), Gaps = 2/319 (0%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 A L D+KKRGFL+CG GFA N W+G ++D+C+ALSSA+F D +K + +P+ Sbjct: 9 ADTLDDVKKRGFLRCGTGEAKAGFAMPGDNNQWQGMEIDYCKALSSAVFGDETKFEVVPV 68 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 +K RF +L S++ID+L + T WT R+ LG+ F +FDGQGF++ K+ G++S QL Sbjct: 69 TSKVRFTSLTSREIDVLVKGTTWTYSRDAKLGVDFAAYWFFDGQGFLIKKELGVTSAKQL 128 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 +GA+IC+ GTT+E +AD+F+ ++MKY P+V + E A + RCD T D+SAL + Sbjct: 129 NGATICISPGTTSEKNVADFFRTYDMKYKPVVIKAGPETLDALQKGRCDVITNDLSALAS 188 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 + P + V+L D I+K PL+ + Q D+ W ++++WT A+V AEELGITQ+N+ Q Sbjct: 189 DRQKFTNPDDFVVLQDNIAKEPLSLYVRQNDSRWKDVITWTRNALVEAEELGITQENVGQ 248 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 +K +P V R LG + GE LGL W + I +GNYGE+F+RN+G Q+ + + Sbjct: 249 HAKHPIDPRVARLLGAKGA--YGEMLGLPNTWAHDAISAVGNYGEIFERNVGEQTRMGLT 306 Query: 324 RGYNALWSKGGLMYAPPIR 342 R N W GGL++APP R Sbjct: 307 RNLNQQWYDGGLVFAPPFR 325 >gi|56751276|ref|YP_171977.1| polar amino acid transport system substrate-binding protein [Synechococcus elongatus PCC 6301] gi|81299057|ref|YP_399265.1| extracellular solute-binding protein [Synechococcus elongatus PCC 7942] gi|56686235|dbj|BAD79457.1| polar amino acid transport system substrate-binding proetin [Synechococcus elongatus PCC 6301] gi|81167938|gb|ABB56278.1| extracellular solute-binding protein, family 3 [Synechococcus elongatus PCC 7942] Length = 359 Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 141/320 (44%), Positives = 207/320 (64%), Gaps = 5/320 (1%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L ++ RG L CG+ L GF+ + + G++ G DVD C+A+++A+F+DP I+Y L+ Sbjct: 43 SRLNQVQARGKLLCGVEGRLPGFSFLDSQGNYSGLDVDICKAIAAALFNDPKAIEYRSLD 102 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLG--LAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ERF AL S ++D+LSRNT WTL R+ G L F P T++DGQG ++ + GI S+ Sbjct: 103 SVERFPALASGEVDLLSRNTTWTLSRDAKGGNNLEFAPTTFYDGQGLMVRRNSGIQSLQD 162 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 G SICV+ GTT+EL LAD + ++Y I F + AAY RC+ T D S L Sbjct: 163 FQGKSICVETGTTSELNLADTMRELGVQYQEIKFPNSDANYAAYAQGRCEGVTSDRSQLA 222 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 A + T +H +L +ISK PL+PA + D+ W+++V W A + AEE GITQ NI+ Sbjct: 223 ARRTTLSDADQHQLLDAVISKEPLSPATLNNDSPWFDVVKWVVNATIQAEEFGITQANID 282 Query: 263 QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKI 322 Q K + NP+++RFLG++ +G+ LGL+ D+ YR I+ +GNYGE+++RN+G QS LK+ Sbjct: 283 QF-KTSKNPEIRRFLGLE--GELGQQLGLSNDFAYRAIKAVGNYGEIYERNVGQQSPLKL 339 Query: 323 PRGYNALWSKGGLMYAPPIR 342 RG N L+ GGL+Y+PP R Sbjct: 340 NRGLNQLYKNGGLLYSPPFR 359 >gi|218672485|ref|ZP_03522154.1| general L-amino acid ABC transporter, substrate-binding protein [Rhizobium etli GR56] Length = 219 Score = 296 bits (759), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 129/220 (58%), Positives = 176/220 (80%), Gaps = 1/220 (0%) Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y+DGQGF++ K + S +LSGAS+CVQ+GTTTEL LADYFKA+N++Y+P+VFE+++E+ Sbjct: 1 YYDGQGFMVRKSLNVKSALELSGASVCVQSGTTTELNLADYFKANNLQYNPVVFEKLDEV 60 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 +AAY A RCD YT D S LY+L+LT P EH ILP+IISK PL PA+ QGD +W++IVS Sbjct: 61 NAAYDAGRCDVYTTDQSGLYSLRLTLKNPDEHAILPEIISKEPLGPAVRQGDDQWFDIVS 120 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302 W YA++ AEE GITQ N++ + K++ NPD++RFLG++ + IG LGLT +W Y II++ Sbjct: 121 WVGYALINAEEFGITQANVDDM-KNSPNPDIKRFLGVEADTKIGTDLGLTNEWAYNIIKN 179 Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGE+F+RN+G S+LKI RG NALW+KGG+ YAPP+R Sbjct: 180 VGNYGEVFERNVGQGSQLKIARGLNALWNKGGIQYAPPVR 219 >gi|166368449|ref|YP_001660722.1| amino acid transport system substrate-binding protein [Microcystis aeruginosa NIES-843] gi|166090822|dbj|BAG05530.1| amino acid transport system substrate-binding protein [Microcystis aeruginosa NIES-843] Length = 351 Score = 296 bits (759), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 147/326 (45%), Positives = 210/326 (64%), Gaps = 6/326 (1%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 T+ S +A L +K RG L CGIN + GF+ V G++ G DV CRA+++A+FDDPSK Sbjct: 31 TANSPSADRLQTVKNRGKLICGINGEVPGFSFVNEKGEYSGLDVQICRAIAAALFDDPSK 90 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++Y L+ +ERF A+Q+ ++DILSRNT WT+ R+ +LG+ F ++DGQG + K + Sbjct: 91 VEYRKLSPQERFTAVQTGEVDILSRNTTWTINRDTALGMEFITPVFYDGQGIMATKASNV 150 Query: 138 SSVSQLSGASICVQAGTTTELTLADYF-KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 + LSG SICV +GTTTE LAD KA Y PIV + VE + AY+A RC A T Sbjct: 151 KKLEDLSGKSICVLSGTTTEQNLADAMAKAAVQGYKPIVSDDVEALYTAYQAGRCQAVTS 210 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 D S L A + RP +H +L +ISK PLAPA+ GD W N V ++++ EE GI Sbjct: 211 DRSQLVARRSVFPRPQDHQLLEVVISKEPLAPAVADGDPAWSNAVRSIVFSLIQGEEFGI 270 Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316 +NI + D+ +P ++RFLGID+ +GE +GL D+ R+++ +GNYGE++DR +G Sbjct: 271 NSQNIATFA-DSKDPSIRRFLGIDE--KLGEDMGLPNDFAQRVLKQVGNYGEIYDREIGK 327 Query: 317 QSELKIPRGYNALWSKGGLMYAPPIR 342 L++ RG N LW+KGGL+Y+PP R Sbjct: 328 --PLQLDRGLNNLWTKGGLLYSPPFR 351 >gi|159028157|emb|CAO89764.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 351 Score = 296 bits (758), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 147/326 (45%), Positives = 210/326 (64%), Gaps = 6/326 (1%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 T+ S +A L +K RG L CGIN + GF+ V G++ G DV CRA+++A+FDDP+K Sbjct: 31 TANSPSADRLQTVKNRGKLICGINGEVPGFSFVNEKGEYSGLDVQICRAIAAALFDDPAK 90 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++Y L+ +ERF A+Q+ ++DILSRNT WT+ R+ +LG+ F ++DGQG + K I Sbjct: 91 VEYRKLSPQERFTAVQTGEVDILSRNTTWTINRDTALGMEFITPVFYDGQGIMATKASNI 150 Query: 138 SSVSQLSGASICVQAGTTTELTLADYF-KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 + LSG SICV +GTTTE LAD KA Y PIV + VE + AY+A RC A T Sbjct: 151 KKLEDLSGKSICVLSGTTTEQNLADAMAKAAVQGYKPIVSDDVEALYTAYQAGRCQAVTS 210 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 D S L A + RP +H +L +ISK PLAPA+ GD W N V ++++ EE GI Sbjct: 211 DRSQLVARRSVFPRPQDHQLLEVVISKEPLAPAVADGDPAWSNAVRSIVFSLIQGEEFGI 270 Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316 +NI + D+ +P ++RFLGID+ +GE +GL D+ R+++ +GNYGE++DR +G Sbjct: 271 NSQNIATFA-DSKDPSIRRFLGIDE--KLGEDMGLPNDFAQRVLKQVGNYGEIYDREIGQ 327 Query: 317 QSELKIPRGYNALWSKGGLMYAPPIR 342 L++ RG N LW+KGGL+Y+PP R Sbjct: 328 --PLQLDRGLNNLWTKGGLLYSPPFR 351 >gi|33600508|ref|NP_888068.1| ABC transporter substrate-binding protein [Bordetella bronchiseptica RB50] gi|33568107|emb|CAE32020.1| Putative ABC transport system, substrate-binding protein [Bordetella bronchiseptica RB50] Length = 336 Score = 296 bits (758), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 145/333 (43%), Positives = 206/333 (61%), Gaps = 4/333 (1%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 L + + T+ +A L D+K RG L C TG GF+ G G +VD CRA+++ Sbjct: 8 LLVAAIAHTAAPVHAGTLEDVKARGNLLCSSTTGSPGFSMPDDAGKRHGLEVDVCRAIAT 67 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 A+F DP + + + LN +RF ALQS ++DIL T WTL RE G + +TY+DGQG Sbjct: 68 AVFGDPERHKIVVLNPTQRFTALQSGEVDILFNTTTWTLSRE-GAGALYAGVTYYDGQGV 126 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 ++ +K I+S +L G +IC G+TTEL L D+F+A+ + I F V+E AY + Sbjct: 127 LV-RKGTIASAKELDGGAICTNQGSTTELNLVDFFRANKVSNEVITFATVQEAANAYESG 185 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 RCDA++ D L AL+ P +HVIL D +SK PL A+ +GD W+++V W+ +A+ Sbjct: 186 RCDAWSADAGILAALRSKMKAPDDHVILADRLSKEPLGAAVRKGDDAWFSVVRWSIFALQ 245 Query: 250 TAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEM 309 AEELG+T KNI + +K TTNP+V RF+G K ++G+ LGL DW Y+I+ +G+Y E+ Sbjct: 246 AAEELGLTSKNIAEQAKSTTNPEVLRFVG--KEGSLGKVLGLNGDWAYQIVAQVGSYAEI 303 Query: 310 FDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 FDRN+G S L + RG NA W GGL Y PP R Sbjct: 304 FDRNIGAASPLNLERGINASWKNGGLFYTPPFR 336 >gi|300022607|ref|YP_003755218.1| extracellular solute-binding protein family 3 [Hyphomicrobium denitrificans ATCC 51888] gi|299524428|gb|ADJ22897.1| extracellular solute-binding protein family 3 [Hyphomicrobium denitrificans ATCC 51888] Length = 344 Score = 296 bits (758), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 141/321 (43%), Positives = 208/321 (64%), Gaps = 3/321 (0%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 + AS++ I+KRG + CG++ GF+E+ +G WKGFDV+FC AL++A+ + +++L Sbjct: 27 SEASLIDTIRKRGHVVCGVSERAPGFSEISGSGTWKGFDVEFCSALAAAVLGNKDSVKFL 86 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 L ++F AL+ +ID+L T WTL R+ LG F Y+DGQGFI+ + ISSV Sbjct: 87 SLMPSDKFNALRDNEIDVLMGATSWTLTRDTELGARFVAALYYDGQGFIVPRNHSISSVL 146 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 +LSGASICV G+T +ADYF A M+Y I +R +E+ Y + C TGD+S L Sbjct: 147 ELSGASICVLPGSTDASAVADYFGARRMRYQLITSDRWDELVKTYSSGGCTVLTGDLSLL 206 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 + ++ ++LP+ ISK PL PA+ G W+ +V WT+ A+V AEELGI N+ Sbjct: 207 AYERSRLANGADQMLLPEYISKEPLGPAVKVGRDSWFAVVRWTYMALVAAEELGINSSNV 266 Query: 262 NQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELK 321 ++ K + + DV+RFLG++ ++IG LGL +DW Y+++R +GNY E+FDR LG S LK Sbjct: 267 -EMMKVSPSHDVRRFLGLE--ADIGAPLGLARDWAYQVVRQVGNYAEIFDRTLGQGSALK 323 Query: 322 IPRGYNALWSKGGLMYAPPIR 342 + RG N LW+KGGLMY+ P+R Sbjct: 324 LDRGLNNLWTKGGLMYSVPMR 344 >gi|288959842|ref|YP_003450182.1| general L-amino acid transport system substrate-binding protein [Azospirillum sp. B510] gi|288912150|dbj|BAI73638.1| general L-amino acid transport system substrate-binding protein [Azospirillum sp. B510] Length = 356 Score = 295 bits (754), Expect = 8e-78, Method: Compositional matrix adjust. Identities = 144/330 (43%), Positives = 207/330 (62%), Gaps = 4/330 (1%) Query: 13 IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72 I L T + L IK RG +K G+ T GF +NG W+GF VDF RALS A+F Sbjct: 31 IGLALTGAAKAGPTLDAIKARGSIKVGVGT-QPGFFSPDSNGRWQGFFVDFGRALSIAVF 89 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 +DP K+Q++ + ++R ALQS + DIL T R LG F P+ ++DGQG ++ Sbjct: 90 NDPDKVQFVSSSPQQRLPALQSGEFDILLSGVTQTFTRATKLGFHFGPVVFYDGQGLLVP 149 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 KK G++ L+GA++CVQ GTT EL + D+F+ + + + P+V E E A+ + RCD Sbjct: 150 KKLGVAKGKDLNGATVCVQTGTTGELNITDFFRQNKIAFKPVVIEETAENQKAFSSGRCD 209 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 T D S L + +P ++V+LP+ ISK PLAPAI GD +W IV+W YA + AE Sbjct: 210 VLTQDASDLAITRTQLPKPDDYVLLPERISKEPLAPAIRYGDDQWLEIVNWAVYATIQAE 269 Query: 253 ELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDR 312 ELGITQ NI+ + +P ++RFLG+D S +GEA L + Y I++ +GNYGE+FDR Sbjct: 270 ELGITQANIDSFLT-SADPTIRRFLGVDPS--LGEAAKLDPKFAYTIVKTVGNYGEIFDR 326 Query: 313 NLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 N+G +++ + RG+N LW++GGL+YAPP R Sbjct: 327 NVGPATKVGLDRGFNKLWTQGGLLYAPPFR 356 >gi|293605353|ref|ZP_06687737.1| general amino acid ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] gi|292816245|gb|EFF75342.1| general amino acid ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] Length = 338 Score = 294 bits (753), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 148/341 (43%), Positives = 218/341 (63%), Gaps = 5/341 (1%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + F + + +L S + +KK+GFL+CG G+ GF+ + + G+W G DVD Sbjct: 2 RKFLTTAVAATLLCVASGAQAGVTFDAVKKKGFLQCGF-AGIPGFSVLDSKGEWTGLDVD 60 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 CRA+++A+F D SK++ L A+ +F ALQS +ID+LSRNT TL R+ +LGL + Sbjct: 61 MCRAVAAAMFGDASKVKGNVLTAQAKFTALQSGEIDMLSRNTTQTLTRDTTLGLIGVGVN 120 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 ++D QG I+ K + SV +L GA+ICVQ GTTTEL LADYF++ + + P++ E +E Sbjct: 121 FYDAQGLIVKKSMNVKSVKELDGATICVQPGTTTELNLADYFRSRGLTFKPVLVENYDEN 180 Query: 183 DAAYRAHRCDAYTGDISALYA-LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + RCDAYT D S A ++ +P + IL + +SK PL P + QGD +W+N+V Sbjct: 181 FRLLESGRCDAYTNDKSNTAANMRTRLAKPEDWEILSENLSKEPLGPMVRQGDEQWFNVV 240 Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301 W+ AM+ AEE GIT KN++++ K +TNP+VQR LG+ + +G+ LGL W Y II+ Sbjct: 241 RWSLNAMLEAEEYGITSKNVDEMLK-STNPNVQRILGV--TPGMGKNLGLDDKWAYNIIK 297 Query: 302 HMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGE +DR +G S LK+ RG N W++GGLMY P+R Sbjct: 298 QVGNYGESYDRAMGKDSPLKLERGLNKQWTQGGLMYGWPVR 338 >gi|33596740|ref|NP_884383.1| ABC transporter substrate-binding protein [Bordetella parapertussis 12822] gi|33573441|emb|CAE37426.1| Putative ABC transport system, substrate-binding protein [Bordetella parapertussis] Length = 336 Score = 294 bits (752), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 144/325 (44%), Positives = 203/325 (62%), Gaps = 4/325 (1%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 T+ +A L D+K RG L C TG GF+ G G +VD CRA+++A+F DP + Sbjct: 16 TAAPVHAGTLEDVKARGNLLCSSTTGSPGFSMPDDAGKRHGLEVDVCRAIATAVFGDPER 75 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 + + LN +RF ALQS ++DIL T WTL RE G + +TY+DGQG ++ +K I Sbjct: 76 HKIVVLNPIQRFTALQSGEVDILFNTTTWTLSRE-GAGALYAGVTYYDGQGVLV-RKGTI 133 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 +S +L G +IC G+TTEL L D+F+A+ + I F V+E AY + RCDA++ D Sbjct: 134 ASAKELDGGAICTNQGSTTELNLVDFFRANKVSNEVITFATVQEAANAYESGRCDAWSAD 193 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 L AL+ P +HVIL D +SK PL A+ +GD W+++V W+ +A+ AEELG+T Sbjct: 194 AGILAALRSKMKAPDDHVILADRLSKEPLGAAVRKGDDAWFSVVRWSIFALQAAEELGLT 253 Query: 258 QKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQ 317 KNI + +K TTNP+V RF+G K ++G+ LGL DW Y+I+ +G+Y E+FDRN+G Sbjct: 254 SKNIAEQAKSTTNPEVLRFVG--KEGSLGKVLGLNGDWAYQIVAQVGSYAEIFDRNIGAA 311 Query: 318 SELKIPRGYNALWSKGGLMYAPPIR 342 S L + RG NA W GGL Y PP R Sbjct: 312 SPLNLERGINASWKNGGLFYTPPFR 336 >gi|220914746|ref|YP_002490054.1| extracellular solute-binding protein family 3 [Methylobacterium nodulans ORS 2060] gi|219952497|gb|ACL62887.1| extracellular solute-binding protein family 3 [Methylobacterium nodulans ORS 2060] Length = 341 Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 133/322 (41%), Positives = 216/322 (67%), Gaps = 7/322 (2%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 + + + DI+ RG L CG+ G GF+ + G +G D D CRA+++A + K++Y+ Sbjct: 26 SGSKTIDDIRARGQLVCGVTAGAAGFSLPDSRGVMRGIDADICRAVAAATLGEADKVRYV 85 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 P RF ALQS +IDIL R+T WTL RE +LGL F + +FDG GF+++K G+ S Sbjct: 86 PTTVTNRFTALQSGEIDILVRSTTWTLSREANLGLEFAGVYFFDGTGFMVNKSLGVKSSK 145 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 +L+GA+IC+Q GT+TEL +ADYF+ H MK+ PI+ + E + + RCDAY+ DISAL Sbjct: 146 ELNGATICIQPGTSTELAVADYFREHGMKFKPILIQDPAETQNTFISGRCDAYSMDISAL 205 Query: 202 YALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 + + + ++V+LP++ISK P+ + +GD +++++V W+ A++ EE G+TQ N Sbjct: 206 ASFRFQQGPKKDDYVLLPEVISKEPVGVMVRKGDEKFFDLVRWSMIALLQGEESGVTQAN 265 Query: 261 INQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSEL 320 ++Q+ D+ +P ++R LG++ ++G+A+G+ W Y+I++ +GN+GE+++RN+ + L Sbjct: 266 VDQM-LDSKDPTIRRMLGLE--GDLGKAMGVDNKWAYKILKSVGNFGEIWERNI---APL 319 Query: 321 KIPRGYNALWSKGGLMYAPPIR 342 I RG NALW+KGGL Y PP+R Sbjct: 320 GISRGINALWTKGGLHYPPPMR 341 >gi|152998090|ref|YP_001342925.1| extracellular solute-binding protein [Marinomonas sp. MWYL1] gi|150839014|gb|ABR72990.1| extracellular solute-binding protein family 3 [Marinomonas sp. MWYL1] Length = 339 Score = 291 bits (746), Expect = 7e-77, Method: Compositional matrix adjust. Identities = 143/342 (41%), Positives = 215/342 (62%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +I+ +L ++ A L ++K RG +KCGI+ G GF+ G+W G D Sbjct: 1 MKKLIATAIIGAGVLSASASVYAADKLEEVKARGVMKCGIHPGKAGFSTPDTKGNWTGLD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ C+A+++A+F D SK++++ +N++ R AL + +ID+L+R+T +T R+ G+ Sbjct: 61 VELCKAVAAAVFGDASKVEFITMNSRNRLTALVTDEIDMLARSTTFTATRDGLNGVDVTT 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 ++DGQ ++ K+ G++S+ +L GA+IC GTT+E + DYF++ + Y ++ E Sbjct: 121 PWFYDGQALMVKKELGVNSIEELDGATICTYPGTTSEKNINDYFESRGLSYKALIVEGSA 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E AAY A+RCDA T D SAL A + PS +VILP+ ISK PL + QG+ EW + Sbjct: 181 ESTAAYLANRCDAVTNDASALAADRQGMPDPSANVILPERISKEPLGAYVKQGNDEWRQV 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V+WT A++ AEE GITQ N+++ K +T PDV R LG + S +G+ GL W Y I Sbjct: 241 VTWTAMALIEAEEQGITQSNVDEKLK-STKPDVMRLLGTEGS--LGKNFGLDDKWAYNAI 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+FDRNLG S LK RG N L++KGGL+YA P R Sbjct: 298 KAVGNYGEIFDRNLGKDSALKFDRGLNNLYTKGGLLYAYPFR 339 >gi|83858265|ref|ZP_00951787.1| ABC glutamate/glutamine/aspartate/asparagine transporter, periplasmic substrate-binding protein [Oceanicaulis alexandrii HTCC2633] gi|83853088|gb|EAP90940.1| ABC glutamate/glutamine/aspartate/asparagine transporter, periplasmic substrate-binding protein [Oceanicaulis alexandrii HTCC2633] Length = 353 Score = 291 bits (745), Expect = 9e-77, Method: Compositional matrix adjust. Identities = 129/318 (40%), Positives = 200/318 (62%), Gaps = 2/318 (0%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S + ++++RG L+CG++TGLVGFA+ G W GF+V+ CRA ++A +DP + +++P Sbjct: 38 SHMDEVQRRGVLRCGVDTGLVGFAQTDETGSWSGFEVELCRAYAAAFLNDPDRAEFIPTT 97 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 +RF A++ ++DIL RNT WTL R G+ F I Y+DGQGF+ G++S +LS Sbjct: 98 TLDRFRAVREGEVDILLRNTSWTLSRATLQGVRFAGIYYYDGQGFLTPADLGLTSAQELS 157 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 GA ICVQ TT+ L L DY + + + + + E V + AY A +CDA+T D+S L Sbjct: 158 GARICVQPETTSALNLDDYAERYGLDFTIVSVETVADARTAYEAGQCDAFTSDVSRLAGF 217 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 + + P H++LPD+ISK PL+P + D + V W +++ AEE G+TQ Sbjct: 218 RRSLSEPDRHMVLPDVISKEPLSPVVRDDDDAFAMAVEWVLTSLIAAEEYGVTQSQAASA 277 Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324 + ++ P+V+R L +D+ + +LGL D+ + I G+YGE+F+RNLG S+L++ R Sbjct: 278 DQTSSRPEVRRLLEVDE--EVAASLGLENDFARQAIAVGGHYGELFERNLGEASQLQLER 335 Query: 325 GYNALWSKGGLMYAPPIR 342 G NA W +GGL+YAPP+R Sbjct: 336 GLNAQWKEGGLLYAPPVR 353 >gi|126731767|ref|ZP_01747571.1| Lysine-arginine-ornithine-binding periplasmic protein [Sagittula stellata E-37] gi|126707594|gb|EBA06656.1| Lysine-arginine-ornithine-binding periplasmic protein [Sagittula stellata E-37] Length = 344 Score = 290 bits (741), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 138/322 (42%), Positives = 206/322 (63%), Gaps = 6/322 (1%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 + L IK RG L CG++ GFA + G+W G +VD+C AL++A+F D K++++ Sbjct: 27 SGDTLASIKSRGELLCGVHPARHGFAAPDSQGNWAGLEVDYCHALAAAVFGDADKVRFVA 86 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 L++++RF A+QS ++D+L RN TL R+ +LGL F P ++ G GF++H G+ +V Sbjct: 87 LSSQQRFPAIQSGEVDVLVRNVTATLGRDTALGLNFAPPIFYTGTGFLVHAGSGVETVED 146 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L GA+ICV G+TTE +A F + M+Y P+V E +++ AY RCDA T D +AL Sbjct: 147 LDGATICVAPGSTTERNVAQIFASRGMEYTPVVIENNKQLVDAYVTGRCDALTKDKAALP 206 Query: 203 ALKL--TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 ++ T D P EHV+LP I SK PLAPA+ QGD +WY+IV W YA AEELG+T +N Sbjct: 207 GVRAYDTTD-PKEHVLLPGIFSKEPLAPAVRQGDDQWYDIVKWVVYATFNAEELGVTSEN 265 Query: 261 INQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSEL 320 ++ +++ + DV LG + + G LGLT+DW Y +I +GNYGE++DR+ G S + Sbjct: 266 AEEM-RNSDDVDVMSLLGT--TGDYGSKLGLTEDWAYDVITQVGNYGEIYDRHFGPDSPV 322 Query: 321 KIPRGYNALWSKGGLMYAPPIR 342 ++ R N W+ GGL+Y PI+ Sbjct: 323 QLDRDLNKQWTDGGLLYGFPIK 344 >gi|301166613|emb|CBW26189.1| General L-amino acid substrate binding protein [Bacteriovorax marinus SJ] Length = 347 Score = 290 bits (741), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 142/328 (43%), Positives = 204/328 (62%), Gaps = 4/328 (1%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 L TS S AS + +IKKRG L CG++ GL GF+ G+WKGFDVD C+A++ AIF+D Sbjct: 24 LLLTSLSW-ASTISEIKKRGHLNCGVSEGLTGFSIPNEKGEWKGFDVDICKAIAVAIFND 82 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 K++++P + ERF +L KQIDILSRNT T RE++ + F P+ YFD QG ++ K+ Sbjct: 83 TQKVKFIPTSLGERFNSLAKKQIDILSRNTSRTFSREVTRDIEFAPVVYFDTQGILVSKR 142 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I + L ICV+ TTT+ L DYFK HN++ + F+ +++ + RC A Sbjct: 143 SKIKKIKDLDNKKICVKNNTTTQQNLIDYFKHHNLRLRQVRFDNNDQLVLGFLKKRCIAL 202 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 T D++ L + K +L + I K PLAP I+ GD W N+V WT Y+++ AEEL Sbjct: 203 TSDVTTLISEKNHFQNSKSFTLLSERIEKEPLAPVILSGDRRWKNLVDWTIYSLIWAEEL 262 Query: 255 GITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNL 314 G++ NI + K + +P V+RF G + N + LG++ WT II +GNY E+F RNL Sbjct: 263 GVSSSNI-EAMKTSADPRVKRFFG--EGFNFEKMLGVSNGWTGNIISKIGNYSEVFHRNL 319 Query: 315 GNQSELKIPRGYNALWSKGGLMYAPPIR 342 G S LKIPRG N+LW GG++Y+PP++ Sbjct: 320 GRDSNLKIPRGLNSLWKDGGILYSPPMK 347 >gi|326794954|ref|YP_004312774.1| ABC-type transporter periplasmic subunit family 3 [Marinomonas mediterranea MMB-1] gi|326545718|gb|ADZ90938.1| ABC-type transporter, periplasmic subunit family 3 [Marinomonas mediterranea MMB-1] Length = 343 Score = 289 bits (740), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 137/341 (40%), Positives = 213/341 (62%), Gaps = 7/341 (2%) Query: 7 VSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 S+L L F++ S AS L ++K RG++ C I GF + G+W+G D+D Sbjct: 5 TSLLILASSMFSAASYAAETASTLDEVKSRGYMNCVIGNSFPGFYSLNKEGEWQGMDIDM 64 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 CR++S+A+F D SK+++LP+ + F +++S + D+LS+ WTL R+ GL F + Sbjct: 65 CRSVSAAVFGDSSKVKFLPVQWAQSFTSIKSGKGDMLSKGMTWTLSRDTQQGLDFLDTYF 124 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 +DGQGF++ K G+ SV L GA++CV GT++EL +AD+ +A+N+ +VF+ + Sbjct: 125 YDGQGFMVRKDLGVDSVYDLEGATVCVLTGTSSELNIADFSRANNLDLKTVVFDDSSVRN 184 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 A+ CDA T D S L A + P ++++LP+ ISK L+ A+ Q D+EW N+V W Sbjct: 185 TAFFNDNCDALTNDKSGLAAQRSAAQNPDDYIVLPETISKEALSFAVKQNDSEWANVVKW 244 Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHM 303 T AMV AEE GIT N++Q+ ++ +P V+R LG++ + N G LGL +DW Y++I+ + Sbjct: 245 TFAAMVAAEEYGITSDNVDQMRSESNSPVVRRLLGVEGNLNTG--LGLPQDWAYQVIKSV 302 Query: 304 GNYGEMFDRNLGNQSELKIPR--GYNALWSKGGLMYAPPIR 342 GNYGE+++RN+G S L + R NALW GG+MYA R Sbjct: 303 GNYGEVYERNVGPNSVLGLKREGTLNALWKDGGMMYAKSFR 343 >gi|296534477|ref|ZP_06896902.1| ABC superfamily ATP binding cassette transporter, binding protein [Roseomonas cervicalis ATCC 49957] gi|296265196|gb|EFH11396.1| ABC superfamily ATP binding cassette transporter, binding protein [Roseomonas cervicalis ATCC 49957] Length = 449 Score = 289 bits (740), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 130/322 (40%), Positives = 206/322 (63%), Gaps = 2/322 (0%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 S+ + L ++ RG L CG++TG+ GFA + G W+G DVD CR L++AIF+DP+K++ Sbjct: 130 SSASPTLEAVRARGQLVCGVHTGIAGFALPDSRGVWQGLDVDLCRGLAAAIFNDPAKLRL 189 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +P+++ RF AL S ++D+L R + T+LR+ +LGL +FDG GF++ G+ V Sbjct: 190 VPVSSSTRFTALGSGELDVLFRTSTQTMLRDTTLGLRHAVTYFFDGHGFMVRADSGVQRV 249 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 ++L GA+IC+ GTT E ADYF++ N + P+VFER +++ AA +A RCDA+ D S Sbjct: 250 AELRGATICLVQGTTNEQVTADYFRSINTPFQPVVFERTDQVAAALQAGRCDAFGTDASQ 309 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L A + + P++ +LP+ SK P + +GD W++IV W A++ AEE G+T N Sbjct: 310 LAATRASLPNPAQWSVLPERFSKEPYGAYVRRGDDNWFDIVRWYTTAIIEAEEQGVTAAN 369 Query: 261 INQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSEL 320 + + NP+ +R LG+ + +G+AL L W Y IR +GNY E++DR++G + + Sbjct: 370 AEAMRGSSANPNTRRLLGV--TPELGQALKLDPLWAYNAIRAVGNYAEIYDRHMGPATPI 427 Query: 321 KIPRGYNALWSKGGLMYAPPIR 342 +PRG N W++GGL+YA P+R Sbjct: 428 GLPRGPNEQWTRGGLLYAWPMR 449 >gi|83592118|ref|YP_425870.1| extracellular solute-binding protein [Rhodospirillum rubrum ATCC 11170] gi|83575032|gb|ABC21583.1| extracellular solute-binding protein, family 3 [Rhodospirillum rubrum ATCC 11170] Length = 350 Score = 289 bits (740), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 140/326 (42%), Positives = 203/326 (62%), Gaps = 3/326 (0%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 F+S + L IK RG +K G+ GF+ + G W+GF +D RAL+ +F+DP Sbjct: 28 FSSSAEAGETLDAIKARGVIKIGVGGNSPGFSAPDSAGRWQGFFIDIGRALAVTVFNDPE 87 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 K +++ + ++R ALQS + DIL T+ R LG F P+ ++DGQG ++ KK G Sbjct: 88 KAEFVNSSPQQRLPALQSGEFDILLSGVTQTITRATKLGFHFGPVVFYDGQGLLVPKKLG 147 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 I+ S+L GA++CVQ GTT EL +AD+F+ H + + P+V E E A+ + RCD T Sbjct: 148 ITKGSELDGATVCVQTGTTGELNIADFFRQHKISFKPVVIEESNEFLKAFASGRCDVLTQ 207 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 D S L + +++V+LP+ ISK PLAPAI GD W IV+WT YA++ AEELGI Sbjct: 208 DSSDLAIRRTLLPNAADYVLLPERISKEPLAPAIRYGDDRWLEIVNWTVYALIEAEELGI 267 Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316 TQ I+ + NP ++RFLG+D S + EA GL + Y II+ +GNYGE+F+R++G Sbjct: 268 TQATIDSF-LGSDNPSIRRFLGVDPS--LAEATGLDAKFAYNIIKALGNYGEVFERSVGK 324 Query: 317 QSELKIPRGYNALWSKGGLMYAPPIR 342 S+L RGYN W++GGL+Y+PP R Sbjct: 325 ASKLGFERGYNQPWTQGGLLYSPPFR 350 >gi|227325810|ref|ZP_03829834.1| Extracellular solute-binding protein, family 3 precursor [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 350 Score = 287 bits (735), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 138/336 (41%), Positives = 208/336 (61%), Gaps = 4/336 (1%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 S+L + + + N L IK RG L CG++ GF+ + + G W G DVD+CRAL Sbjct: 18 SLLLPVAQATAADAGNGETLKKIKARGELVCGVHPARHGFSAIDSKGQWTGLDVDYCRAL 77 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 ++AIF D +K+++ L+ +RF A+QS ++D+LSRN L R+ SLGL F P T++ G Sbjct: 78 AAAIFGDANKVRFAALSTAQRFPAIQSGEVDVLSRNITADLSRDTSLGLNFAPPTFYTGT 137 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 GF++ + V L GA++C+ G++TE +A F + N+ Y P+V E +E AAY Sbjct: 138 GFMVRTSANVKKVEDLDGATVCITPGSSTERNVAQIFASRNLHYTPVVIENNKEYVAAYL 197 Query: 188 AHRCDAYTGDISALYALK-LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + RCD D AL ++ ++PS+HVILP I SK PLA A+ QGD +WY+IV W Y Sbjct: 198 SGRCDVIARDKVALPGVRTFDAEKPSDHVILPGIYSKEPLAMAVRQGDDQWYDIVKWVVY 257 Query: 247 AMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNY 306 A AEE+ I Q+N++ K +T+PD+Q LG+ + + G+ LGL W Y +I+ +GNY Sbjct: 258 ATFNAEEMEIGQQNVDSKLK-STDPDIQALLGV--TGDYGQKLGLNNQWAYNLIKQVGNY 314 Query: 307 GEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 G++++R+ G + + R N LW+KGGL+Y PIR Sbjct: 315 GDIYNRHFGPDTPAPLERDLNNLWTKGGLLYGLPIR 350 >gi|261823404|ref|YP_003261510.1| extracellular solute-binding protein family 3 [Pectobacterium wasabiae WPP163] gi|261607417|gb|ACX89903.1| extracellular solute-binding protein family 3 [Pectobacterium wasabiae WPP163] Length = 350 Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 137/321 (42%), Positives = 202/321 (62%), Gaps = 4/321 (1%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 N L IK RG L CG++ GF+ + + G W G DVD+CRAL++AIF D SK+++ Sbjct: 33 NGETLKKIKARGELVCGVHPARHGFSAIDSKGQWTGLDVDYCRALAAAIFGDASKVRFAA 92 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 L+ +RF A+QS ++D+LSRN L R+ SLGL F P T++ G GF++ + +V Sbjct: 93 LSTAQRFPAIQSGEVDVLSRNITADLSRDTSLGLNFAPPTFYTGTGFMVRTSANVKTVED 152 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L GA++C+ G++TE +A F + N+ Y P+V E +E AAY + RCD D AL Sbjct: 153 LDGATVCITPGSSTERNVAQIFASRNLHYTPVVIENNKEYVAAYLSGRCDVIARDKVALP 212 Query: 203 ALK-LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 ++ ++P++HVILP I SK PLA A+ QGD +WY+IV W YA AEE+ I Q+N+ Sbjct: 213 GVRTFDAEKPADHVILPGIYSKEPLAMAVRQGDDQWYDIVKWVVYATFNAEEMEIGQQNV 272 Query: 262 NQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELK 321 + K +T+PDVQ LG + + G+ LGL W Y +I+ +GNYG++++R+ G + Sbjct: 273 DSKLK-STDPDVQALLGT--TGDYGQKLGLNNQWAYNLIKQVGNYGDIYNRHFGPDTPAP 329 Query: 322 IPRGYNALWSKGGLMYAPPIR 342 + R N LW+KGGL+Y PIR Sbjct: 330 LERDLNNLWTKGGLLYGLPIR 350 >gi|152994191|ref|YP_001339026.1| extracellular solute-binding protein [Marinomonas sp. MWYL1] gi|150835115|gb|ABR69091.1| extracellular solute-binding protein family 3 [Marinomonas sp. MWYL1] Length = 343 Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 132/320 (41%), Positives = 208/320 (65%), Gaps = 4/320 (1%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L +K+RG++ C I GF + G+W+G D+D CR ++SA+F D SK+++LP+ Sbjct: 26 STLDAVKERGYVNCVIGNSFPGFYSLNKAGEWQGMDIDMCRGVASAVFGDASKVKFLPVQ 85 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 + F +++S + DILS+ WTL R+ + GL F ++DGQGF++ K G+ SV +L+ Sbjct: 86 WAQSFTSIKSGKGDILSKGMTWTLSRDSAQGLDFLDTYFYDGQGFMVRKDLGVKSVKELN 145 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 GA++CV GT++EL +ADY +A+N+ +VF+ + A+ + CDA T D S L A Sbjct: 146 GATVCVLTGTSSELNIADYSRANNLDIKTVVFDDSSVRNTAFFNNNCDALTNDKSGLAAQ 205 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 + P+++VILP+ ISK L+ A+ Q D+EW N+V WT AMV AEE G+ +N+ ++ Sbjct: 206 RSAAPNPNDYVILPETISKEALSFAVKQNDSEWANVVKWTFAAMVAAEEFGVNSQNVEKM 265 Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324 ++ +P V+R LG++ N G LGL +DW +++I+++GNYGE+++RN+G S L + R Sbjct: 266 RAESQSPVVRRLLGVEGDLNTG--LGLPQDWAFQVIKNVGNYGEVYERNVGTDSVLGLDR 323 Query: 325 --GYNALWSKGGLMYAPPIR 342 N LW+KGGLMYA R Sbjct: 324 EGTLNELWTKGGLMYAKSFR 343 >gi|163793102|ref|ZP_02187078.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [alpha proteobacterium BAL199] gi|159181748|gb|EDP66260.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [alpha proteobacterium BAL199] Length = 346 Score = 286 bits (732), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 139/324 (42%), Positives = 199/324 (61%), Gaps = 4/324 (1%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 S S L +K RG L+C + T G+ + G W GFD + CRA+S+AIF DP KI+ Sbjct: 25 SAQQSTLDIVKSRGHLRCQLGTPAPGWYMLSDTGKWSGFDYENCRAVSAAIFGDPDKIEV 84 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + + RF A+ + + D+LSR T WTL RE LGL F ++++DGQGF++ K GI S Sbjct: 85 QSVTSAVRFTAMANGESDMLSRTTTWTLFRETQLGLDFTTVSFYDGQGFMVLKDAGIKSA 144 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 +L GA++CV GTTTEL L DY + + + P+VFE D + CDA T D S+ Sbjct: 145 LELKGATVCVATGTTTELNLTDYSRTNGLDIKPVVFEDSNVRDNTFFTGGCDAITNDKSS 204 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L + + S ILP+ ISK PL P + Q D++W +IV W+ Y M+ AEE G++ N Sbjct: 205 LASTRAKAPDVSIFKILPETISKEPLGPVVRQNDSQWKDIVQWSVYTMIAAEEYGMSSTN 264 Query: 261 INQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSEL 320 +++V +TTNP+++R LG + N G LGL W Y II+ +GNYGE ++ +G ++ + Sbjct: 265 VDKVLAETTNPEIKRMLGAEGDLNKG--LGLEPKWAYNIIKMVGNYGENYEEFMGEKTVM 322 Query: 321 KIPR--GYNALWSKGGLMYAPPIR 342 IPR NALW+KGGL+Y+PP R Sbjct: 323 NIPRDGSPNALWTKGGLLYSPPFR 346 >gi|163742834|ref|ZP_02150218.1| predicted amino-acid transporter subunit [Phaeobacter gallaeciensis 2.10] gi|161383798|gb|EDQ08183.1| predicted amino-acid transporter subunit [Phaeobacter gallaeciensis 2.10] Length = 347 Score = 285 bits (730), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 141/348 (40%), Positives = 210/348 (60%), Gaps = 10/348 (2%) Query: 3 KDFFVSILCLII----LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 K+ F + C + L + + S L +K RG L C + GF ++ +GDW+G Sbjct: 2 KNLFSMLSCAAMAAGGLSIAAPAAAQSTLETVKTRGHLNCQVGPPRAGFYQLLESGDWEG 61 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 DV CRA+++AIF DP+K+++ ++A RF +L + + D+LSR WT+ R+ +LG+ F Sbjct: 62 SDVAVCRAMAAAIFGDPNKVEFQSVSASVRFTSLANGESDVLSRTATWTVGRDAALGIDF 121 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + DGQGF++ K GI S L+GA++CV G T+E TL D+ +A+N+ + F+ Sbjct: 122 TAPVFHDGQGFLVRKDSGIKSAFDLTGATVCVITGHTSEATLQDFSRANNLDIQAVAFDD 181 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 ++ Y CDA T D L + PSEHV+LP+I+SK PL PA+ GD +W Sbjct: 182 SAIVNETYLNGGCDAITTDKGVLASEARGFPDPSEHVVLPEILSKEPLTPAVRNGDNQWG 241 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298 +IV WT +A++ AEELGITQ N+ +++ + NP V RFLG + N G LGL KDW Sbjct: 242 DIVQWTVFALINAEELGITQANVEEIAANPPNPLVARFLGAEGELNTG--LGLPKDWVVH 299 Query: 299 IIRHMGNYGEMFDRNLGN--QSELKIPRG--YNALWSKGGLMYAPPIR 342 I+ +GNYGE+++ LG+ L IPR NALW++GGLM++PP R Sbjct: 300 AIKAVGNYGEIYEHYLGDGRPEALGIPRAGSANALWTEGGLMFSPPFR 347 >gi|253690349|ref|YP_003019539.1| extracellular solute-binding protein family 3 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251756927|gb|ACT15003.1| extracellular solute-binding protein family 3 [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 350 Score = 285 bits (729), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 134/321 (41%), Positives = 202/321 (62%), Gaps = 4/321 (1%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 N L IK RG L CG++ GF+ + + G W G DVD+CRAL++A+F D +K+++ Sbjct: 33 NGETLKKIKARGELVCGVHPARHGFSAIDSKGQWTGLDVDYCRALAAAVFGDANKVRFAA 92 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 L+ +RF A+QS ++D+LSRN L R+ SLGL F P T++ G GF++ + V Sbjct: 93 LSTAQRFPAIQSGEVDVLSRNITADLSRDTSLGLNFAPPTFYTGTGFMVRTSANVKKVED 152 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L GA++C+ G++TE +A F + N+ Y P+V E +E AAY + RCD D AL Sbjct: 153 LDGATVCITPGSSTERNVAQIFASRNLHYTPVVIENNKEYVAAYLSGRCDVIARDKVALP 212 Query: 203 ALK-LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 ++ ++PS+HVILP I SK PLA A+ QGD +WY+IV W YA AEE+ I Q+N+ Sbjct: 213 GVRTFDAEKPSDHVILPGIYSKEPLAMAVRQGDDQWYDIVKWVVYATFNAEEMEIGQQNV 272 Query: 262 NQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELK 321 + K +T+PD+Q LG+ + + G+ LGL+ W Y +I+ +GNY ++++R+ G + Sbjct: 273 DSKLK-STDPDIQALLGV--TGDYGQKLGLSNQWAYNVIKQVGNYSDIYNRHFGPDTPAP 329 Query: 322 IPRGYNALWSKGGLMYAPPIR 342 + R N LW+KGGL+Y PIR Sbjct: 330 LERDLNNLWTKGGLLYGLPIR 350 >gi|328950982|ref|YP_004368317.1| ABC-type transporter, periplasmic subunit family 3 [Marinithermus hydrothermalis DSM 14884] gi|328451306|gb|AEB12207.1| ABC-type transporter, periplasmic subunit family 3 [Marinithermus hydrothermalis DSM 14884] Length = 341 Score = 285 bits (729), Expect = 8e-75, Method: Compositional matrix adjust. Identities = 143/342 (41%), Positives = 219/342 (64%), Gaps = 11/342 (3%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDF 63 V++L + L F S +L +RG L CG+N GF + + G ++GFD+DF Sbjct: 7 LLVAVLLVGALGFAQQSRMDVVL----ERGKLVCGVNNVAPGFGFLNEQTGRFEGFDIDF 62 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 CRA+++A+FDDP ++Y+PL AK RF A+Q+ ++D++ RNT T+ R+ S+G+ F P+ + Sbjct: 63 CRAVAAALFDDPDAVEYVPLTAKARFSAIQTGEVDVVFRNTTITVSRDSSVGVDFLPVNF 122 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV-FERVEEI 182 +DGQG ++ K+ G++SV +L GA++C GTTTE D+ +A + ++ FE ++ Sbjct: 123 YDGQGVMVKKELGVTSVFELEGATVCTNQGTTTEKNWTDFVRAQGWQGGQLLTFEDFSKV 182 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A+ + RCDA T D S L K P E VILP+ ISK PLA Q D++W + ++ Sbjct: 183 FNAFISGRCDAATTDKSGLAGWKAQASNPDEIVILPETISKEPLAGFTFQNDSKWRDALT 242 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302 W YA++ AEE GIT +N+++ K + +P ++RFLG++ GE LGL D+ RI+RH Sbjct: 243 WIVYALIQAEEFGITSENVDEFLK-SDSPAIRRFLGVE--GKFGEDLGLPNDFVVRILRH 299 Query: 303 MGNYGEMFDRNLGNQSELKIPR--GYNALWSKGGLMYAPPIR 342 +GNYGE++DR+LG +S IPR N LW++GGL+YAPP R Sbjct: 300 VGNYGEIYDRHLGPESPFYIPREGSLNELWTRGGLLYAPPFR 341 >gi|254469135|ref|ZP_05082540.1| glutamate/glutamine/aspartate/asparagine-binding protein [Pseudovibrio sp. JE062] gi|211960970|gb|EEA96165.1| glutamate/glutamine/aspartate/asparagine-binding protein [Pseudovibrio sp. JE062] Length = 678 Score = 285 bits (728), Expect = 9e-75, Method: Compositional matrix adjust. Identities = 129/292 (44%), Positives = 189/292 (64%), Gaps = 2/292 (0%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L D+++RG L+C ++TGL GF+ NG W+GFDVD+CRA+++A+ D +++ P K Sbjct: 27 LEDVQERGKLRCAVSTGLAGFSYTDENGKWQGFDVDYCRAVAAAVLGDADAVEFSPTTGK 86 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 RF AL S ++DILSRNT WT R+ L F ++Y+DGQGF++ K G++S +L GA Sbjct: 87 TRFTALASGEVDILSRNTTWTFSRDADLKFTFLGVSYYDGQGFMVKKSLGVASAKELDGA 146 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 ++C+Q GTTTEL L+DYF A M Y P+ E E A Y A CD YT D S L A + Sbjct: 147 TVCIQTGTTTELNLSDYFTAEGMSYEPLSIETNTEGRANYLADACDVYTTDASGLAASRA 206 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 T + +H++LP+IISK PL P + GD +W +I W A+ AEE GIT N ++++ Sbjct: 207 TFENADDHIVLPEIISKEPLGPLVRHGDDQWADIGRWVLNALKIAEEKGITAANADEMAA 266 Query: 267 DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318 ++ +P+V R LG S +G ++GL D+ I+ +GNYGE+F+R+LG Q+ Sbjct: 267 NSKDPEVLRLLG--ASGEMGASVGLGNDFALVAIKAVGNYGEVFERHLGTQT 316 >gi|254432874|ref|ZP_05046577.1| polar amino acid transport system substrate-binding proetin [Cyanobium sp. PCC 7001] gi|197627327|gb|EDY39886.1| polar amino acid transport system substrate-binding proetin [Cyanobium sp. PCC 7001] Length = 344 Score = 283 bits (723), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 139/322 (43%), Positives = 204/322 (63%), Gaps = 8/322 (2%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L I R L CG+ L GF+ V+ +G + G DVD C+A+++A+ DP K++Y LN+ Sbjct: 25 LNGITARDKLVCGVEGTLPGFSFVEPDGRYSGLDVDTCKAVAAAVLGDPDKVEYRNLNSS 84 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLG--LAFRPITYFDGQGFIMHKKKGISSVSQLS 144 ERF AL S ++D+L+RNT TL R+ + G L+F P T++DGQG + K GI+ + LS Sbjct: 85 ERFAALASGEVDMLARNTTATLSRDAAGGNGLSFAPTTFYDGQGVMAPVKSGITDLKGLS 144 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G +ICV++GTTTEL LAD + ++ Y P+ F+ ++ AAY RC A T D S L Sbjct: 145 GKAICVESGTTTELNLADRMREIDVPYTPLKFQTSDQTYAAYLGGRCAAVTSDRSQLAGK 204 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN-- 262 + + P +H +LPD++SK PL+PA D W + + W ++++ AEE GITQ N++ Sbjct: 205 RSSFPAPDDHQLLPDVLSKEPLSPATTNADPAWADALRWIVFSLMQAEEWGITQANLDSK 264 Query: 263 --QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSEL 320 + +T D++RF G++ + G LGL D+T R IR +GNYGE+F+RN+G S L Sbjct: 265 LAEAQANTNLADLRRFFGVE--GDFGRQLGLPADFTVRAIRAVGNYGEIFERNVGTTSRL 322 Query: 321 KIPRGYNALWSKGGLMYAPPIR 342 K+ RG N LWS+GGL+YA P R Sbjct: 323 KLERGLNRLWSEGGLIYAQPFR 344 >gi|39935694|ref|NP_947970.1| polar amino acid ABC transport substrate-binding protein AapJ-2 [Rhodopseudomonas palustris CGA009] gi|39649547|emb|CAE28069.1| polar amino acid ABC transport substrate-binding protein, aapJ-2 [Rhodopseudomonas palustris CGA009] Length = 340 Score = 282 bits (722), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 142/316 (44%), Positives = 198/316 (62%), Gaps = 7/316 (2%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L IK RG +K G+ T G+ +NG W+GF VDF RAL+ +F DP K+Q+ + + Sbjct: 32 LDRIKSRGVIKVGVGT-TPGYFAPDSNGRWQGFFVDFGRALAVTVFGDPDKVQFTSSSPQ 90 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 +R ALQS + D+L T+ R LG F P ++DGQG ++ K G++S SQL GA Sbjct: 91 QRLPALQSGEFDVLLSGVTVTITRAFKLGFHFGPTIFYDGQGILVRKDLGVTSASQLDGA 150 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 +I +Q+GTT EL +ADYF+ H K+ P+ E E AA + R D T D S L A + Sbjct: 151 TIGIQSGTTGELNIADYFRKHRHKFTPVTIEDTSEFIAALDSGRVDGLTQDASDLAAKQT 210 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 +PS++VILP+ +SK PLAPA+ GD W IV+WT A + AEE GIT KN++ K Sbjct: 211 QLKKPSDYVILPERLSKEPLAPAVAGGDDRWLEIVTWTVNATIQAEEWGITSKNVDDFLK 270 Query: 267 DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGY 326 + +P ++RFLG+D S + E++GL W Y II+ +GNYGE+FDR+L L RGY Sbjct: 271 -SDDPSIRRFLGVDPS--LAESIGLDPKWAYTIIKTVGNYGEIFDRHL---KPLGWERGY 324 Query: 327 NALWSKGGLMYAPPIR 342 N LW++GGL+Y+PP R Sbjct: 325 NRLWTQGGLLYSPPFR 340 >gi|192291277|ref|YP_001991882.1| extracellular solute-binding protein family 3 [Rhodopseudomonas palustris TIE-1] gi|192285026|gb|ACF01407.1| extracellular solute-binding protein family 3 [Rhodopseudomonas palustris TIE-1] Length = 340 Score = 281 bits (718), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 141/316 (44%), Positives = 197/316 (62%), Gaps = 7/316 (2%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L IK RG +K G+ T G+ +NG W+GF VDF RAL+ +F DP K+Q+ + + Sbjct: 32 LDRIKSRGVIKVGVGT-TPGYFAPDSNGRWQGFFVDFGRALAVTVFGDPDKVQFTSSSPQ 90 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 +R ALQS + D+L T+ R LG F P ++DGQG ++ K G++S SQL GA Sbjct: 91 QRLPALQSGEFDVLLSGVTVTITRAFKLGFHFGPTIFYDGQGILVRKDLGVTSASQLDGA 150 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 +I +Q+GTT EL +ADYF+ H K+ P+ E E AA + R D T D S L A + Sbjct: 151 TIGIQSGTTGELNIADYFRKHRHKFTPVTIEDTSEFIAALDSGRVDGLTQDASDLAAKQT 210 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 +P ++VILP+ +SK PLAPA+ GD W IV+WT A + AEE GIT KN++ K Sbjct: 211 QLKKPGDYVILPERLSKEPLAPAVAGGDDRWLEIVTWTVNATIQAEEWGITSKNVDDFLK 270 Query: 267 DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGY 326 + +P ++RFLG+D S + E++GL W Y II+ +GNYGE+FDR+L L RGY Sbjct: 271 -SDDPSIRRFLGVDPS--LAESIGLDPKWAYTIIKTVGNYGEIFDRHL---KPLGWERGY 324 Query: 327 NALWSKGGLMYAPPIR 342 N LW++GGL+Y+PP R Sbjct: 325 NRLWTQGGLLYSPPFR 340 >gi|222102263|ref|YP_002546853.1| polar amino acid ABC transport substrate-binding protein, aapJ-2 [Agrobacterium radiobacter K84] gi|221728380|gb|ACM31389.1| polar amino acid ABC transport substrate-binding protein, aapJ-2 [Agrobacterium radiobacter K84] Length = 347 Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 136/319 (42%), Positives = 202/319 (63%), Gaps = 4/319 (1%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 S L IK+RG +K G+ T GF ++G W+GF VDF RAL+ IF++P K+++ Sbjct: 33 GSTLDKIKERGVIKVGVGT-TPGFFTPDSSGRWQGFFVDFGRALAVTIFNNPDKVEFTNS 91 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 + ++R ALQ+ + DIL T+ R LG F P+ ++DGQG ++ K G++ + L Sbjct: 92 SPQQRLPALQAGEFDILLSGVTETITRAFKLGFHFGPVVFYDGQGLLVRKDLGVTKGADL 151 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 GA+I +Q+GTT EL +AD+F+ K+ P+ E E A + R DA T D + L A Sbjct: 152 DGATIGIQSGTTGELNIADFFRKTGKKFTPVTIEETAEFTKALDSGRVDALTQDSTDLAA 211 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 + +P ++V+LP+ +SK PLAPAI GD +W IV+WT YA + AEE GIT+ N++ Sbjct: 212 KRTQLKKPDDYVLLPERLSKEPLAPAIRAGDDQWLEIVNWTIYATIQAEEFGITKDNVDT 271 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 K + +P +QRFLG+D S +G+A+GL + Y II+ +GNYGE+F+RN+G + L Sbjct: 272 FLK-SDDPAIQRFLGVDPS--LGQAIGLDPKFAYNIIKAVGNYGEIFERNVGKGTPLNFD 328 Query: 324 RGYNALWSKGGLMYAPPIR 342 RG N LW+KGGL+Y+PP R Sbjct: 329 RGLNQLWTKGGLIYSPPFR 347 >gi|221370067|ref|YP_002521163.1| Extracellular solute-binding protein, family 3 precursor [Rhodobacter sphaeroides KD131] gi|221163119|gb|ACM04090.1| Extracellular solute-binding protein, family 3 precursor [Rhodobacter sphaeroides KD131] Length = 335 Score = 280 bits (715), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 129/324 (39%), Positives = 206/324 (63%), Gaps = 4/324 (1%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 F+ + L +K+RG + CG++ GFA + G W GF+VDFC A+++A+F D +K++ Sbjct: 15 FAQSGDTLAAVKERGEVLCGVHPARHGFAAPDSQGKWSGFEVDFCHAIAAAVFGDANKVR 74 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 ++ L++++RF A+QS ++D+L+RN TL R+ +LGL F P ++ G GF++ GI Sbjct: 75 FVALSSQQRFPAIQSGEVDVLARNVTATLSRDTALGLNFAPPIFYTGTGFLVRAADGIEK 134 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 V L GA+IC+ G+TTE +A F A + Y P+V E +++ AY RCDA T D + Sbjct: 135 VEDLDGAAICMAPGSTTERNVAQIFAARGLSYTPVVIENNKQLVDAYVTGRCDALTKDKA 194 Query: 200 ALYALK-LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 AL ++ + P +HV+LP I SK PLA A+ QGD +WY++V W YA AEELG+TQ Sbjct: 195 ALPGVRAFDTEVPGDHVLLPGIYSKEPLAMAVRQGDDKWYDLVKWVTYATFNAEELGVTQ 254 Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318 N++++ K + +PD+Q LG+ + G LG+ DW Y I++ +GNY +++ R+ G + Sbjct: 255 ANVDEM-KASDDPDIQTLLGV--IGDNGTKLGVPNDWAYAIVKQVGNYEDIYMRHFGPDT 311 Query: 319 ELKIPRGYNALWSKGGLMYAPPIR 342 + + R N LW++GGL+Y P+ Sbjct: 312 PVALDRDQNQLWTEGGLLYGFPMH 335 >gi|186470673|ref|YP_001861991.1| extracellular solute-binding protein [Burkholderia phymatum STM815] gi|184196982|gb|ACC74945.1| extracellular solute-binding protein family 3 [Burkholderia phymatum STM815] Length = 345 Score = 280 bits (715), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 139/323 (43%), Positives = 200/323 (61%), Gaps = 7/323 (2%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + + L IK RG L+CGI+ G+ GF+ G + G D DFCRA+++A+ DP+K+ + Sbjct: 29 AAGSETLAHIKARGTLRCGISEGIAGFSAADGAGHFSGIDADFCRAVAAAVLGDPNKVTF 88 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +PL A RF AL++ +ID+L+RNT WTLLRE +LG+ F I ++D Q F++ +K G +S Sbjct: 89 VPLKASARFPALRTDRIDLLARNTTWTLLREGTLGIQFAGILFYDAQAFMVSRKNGTAS- 147 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 S L+GA++CVQ TT+E L Y A+++ P+V V E+ A+ + RC A T D S Sbjct: 148 SSLNGATVCVQQDTTSERNLMGYASANSLNVKPLVVGSVPELAQAFFSGRCSAATADASL 207 Query: 201 LYALKLTNDRPSEHV-ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L LK + V ILP+ +SK PL PA+ D W +V W + ++TAEELG+T++ Sbjct: 208 LSVLKSRAPGGASTVEILPERLSKQPLGPAVRGDDDAWLVVVRWVLFTLITAEELGVTRE 267 Query: 260 NINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSE 319 N +D P V R L D + + LG+ WT R ++ GNYGEMF+RNLG S Sbjct: 268 NYAARVRD---PLVARALVPD--ATVTATLGIEPGWTLRALQSAGNYGEMFERNLGAGSP 322 Query: 320 LKIPRGYNALWSKGGLMYAPPIR 342 L + RG N LW+ GGLMYAPP++ Sbjct: 323 LGLERGLNNLWTHGGLMYAPPMQ 345 >gi|126464337|ref|YP_001045450.1| extracellular solute-binding protein [Rhodobacter sphaeroides ATCC 17029] gi|126106148|gb|ABN78678.1| extracellular solute-binding protein, family 3 [Rhodobacter sphaeroides ATCC 17029] Length = 345 Score = 280 bits (715), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 129/324 (39%), Positives = 206/324 (63%), Gaps = 4/324 (1%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 F+ + L +K+RG + CG++ GFA + G W GF+VDFC A+++A+F D +K++ Sbjct: 25 FAQSGDTLAAVKERGEVLCGVHPARHGFAAPDSQGKWSGFEVDFCHAIAAAVFGDANKVR 84 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 ++ L++++RF A+QS ++D+L+RN TL R+ +LGL F P ++ G GF++ GI Sbjct: 85 FVALSSQQRFPAIQSGEVDVLARNVTATLSRDTALGLNFAPPIFYTGTGFLVRAADGIEK 144 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 V L GA+IC+ G+TTE +A F A + Y P+V E +++ AY RCDA T D + Sbjct: 145 VEDLDGAAICMAPGSTTERNVAQIFAARGLSYTPVVIENNKQLVDAYVTGRCDALTKDKA 204 Query: 200 ALYALK-LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 AL ++ + P +HV+LP I SK PLA A+ QGD +WY++V W YA AEELG+TQ Sbjct: 205 ALPGVRAFDTEVPGDHVLLPGIYSKEPLAMAVRQGDDKWYDLVKWVTYATFNAEELGVTQ 264 Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318 N++++ K + +PD+Q LG+ + G LG+ DW Y I++ +GNY +++ R+ G + Sbjct: 265 ANVDEM-KASDDPDIQTLLGV--IGDNGTKLGVPNDWAYAIVKQVGNYEDIYMRHFGPDT 321 Query: 319 ELKIPRGYNALWSKGGLMYAPPIR 342 + + R N LW++GGL+Y P+ Sbjct: 322 PVALDRDQNQLWTEGGLLYGFPMH 345 >gi|87302592|ref|ZP_01085409.1| polar amino acid transport system substrate-binding proetin [Synechococcus sp. WH 5701] gi|87282936|gb|EAQ74893.1| polar amino acid transport system substrate-binding proetin [Synechococcus sp. WH 5701] Length = 405 Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 135/322 (41%), Positives = 205/322 (63%), Gaps = 8/322 (2%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L I+ R L CG++ L GF+ + +G + G D D CRA+++A+ DPSK++Y LN+ Sbjct: 86 LSTIRGRDKLVCGVDGKLPGFSFLGPDGTYSGLDADTCRAVAAAVLGDPSKVEYRDLNSS 145 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLG--LAFRPITYFDGQGFIMHKKKGISSVSQLS 144 ERF AL S ++D+L+RNT TL R+ + G ++F P T++DGQG ++ G ++ L Sbjct: 146 ERFAALASGEVDMLARNTTMTLSRDSAGGNGISFGPTTFYDGQGVMVPVASGARTLKDLD 205 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G ICV++GTTTEL LAD + + Y P+ F+ ++ AAY RC A T D S L A Sbjct: 206 GKPICVESGTTTELNLADRMREQGIAYTPLKFQTGDQTYAAYLGGRCVAVTSDRSQLAAK 265 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN---- 260 + + +P EH++LP+++SK PL PA + GD W + + WT +A+ AEELGIT+ N Sbjct: 266 RSSFPKPDEHILLPEVMSKEPLTPASVNGDPAWADALRWTVFALFQAEELGITKANVAAK 325 Query: 261 INQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSEL 320 + + +T D++RFLG++ + G+ LGL D+ + I +GNYGE+F+RN+G S L Sbjct: 326 VAEAKANTNQADLRRFLGVE--GDFGKQLGLPADFVAKTIAAVGNYGEIFERNVGTGSPL 383 Query: 321 KIPRGYNALWSKGGLMYAPPIR 342 K+ R N LW++GGL+Y+PP R Sbjct: 384 KLERAENRLWTQGGLIYSPPFR 405 >gi|124026134|ref|YP_001015250.1| extracellular solute-binding protein [Prochlorococcus marinus str. NATL1A] gi|123961202|gb|ABM75985.1| extracellular solute-binding protein, family 3 [Prochlorococcus marinus str. NATL1A] Length = 353 Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 141/331 (42%), Positives = 213/331 (64%), Gaps = 12/331 (3%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 T+ N+S L IK R L CG++ + GF+ +K++G ++G DVD C+A ++AI D K Sbjct: 25 TTNQDNSSRLNLIKNRNELICGVSGKIPGFSFLKSDGTYQGLDVDICKAFAAAIIGDSEK 84 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS--LGLAFRPITYFDGQGFIMHKKK 135 IQY PL A ERF A+++ +ID+LSRNT +TL R+ S GL F P+ + DGQG ++ K+ Sbjct: 85 IQYRPLTAAERFTAIKTGEIDLLSRNTTFTLSRDSSGGNGLTFAPVVFHDGQGLMVKKES 144 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 IS + L+ SICV +GTTTE + D F++ ++ Y PI ++ + ++ A Y RC A T Sbjct: 145 KISGLKDLANKSICVGSGTTTEQNINDAFESASLPYTPIKYQDLNQVVAGYLQGRCSAMT 204 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D S L A + P EH+IL D++SK PLAPA D + + + W +++++AEE G Sbjct: 205 SDRSQLAAARSGFKNPKEHIILEDVLSKEPLAPASDGQDQKLADAMRWVVFSLISAEEQG 264 Query: 256 ITQKNIN---QVSKDTTNPDVQ---RFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEM 309 IT+ NI+ Q++K+ NP ++ RFLGID +GE +GL+ D+ ++I GNYGE+ Sbjct: 265 ITKSNIDKKVQIAKN--NPQLKPLRRFLGID--GGLGEKIGLSNDFVVKVISSTGNYGEI 320 Query: 310 FDRNLGNQSELKIPRGYNALWSKGGLMYAPP 340 ++R+LG SE+ IPRG N L+ KGG+ +PP Sbjct: 321 YERHLGQNSEVPIPRGQNELYKKGGVHISPP 351 >gi|72382453|ref|YP_291808.1| extracellular solute-binding protein [Prochlorococcus marinus str. NATL2A] gi|72002303|gb|AAZ58105.1| amino acid ABC transporter substrate-binding protein, PAAT family [Prochlorococcus marinus str. NATL2A] Length = 353 Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 141/331 (42%), Positives = 213/331 (64%), Gaps = 12/331 (3%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 T+ N+S L IK R L CG++ + GF+ +K++G ++G DVD C+A ++AI D K Sbjct: 25 TTNQDNSSRLNLIKNRNELICGVSGKIPGFSFLKSDGTYQGLDVDICKAFAAAIIGDSEK 84 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS--LGLAFRPITYFDGQGFIMHKKK 135 IQY PL A ERF A+++ +ID+LSRNT +TL R+ S GL F P+ + DGQG ++ K+ Sbjct: 85 IQYRPLTAAERFTAIKTGEIDLLSRNTTFTLSRDSSGGNGLTFAPVVFHDGQGLMVKKES 144 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 IS + L+ SICV +GTTTE + D F++ ++ Y PI ++ + ++ A Y RC A T Sbjct: 145 KISGLKDLANKSICVGSGTTTEQNINDAFESASLPYTPIKYQDLNQVVAGYLQGRCSAMT 204 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D S L A + P EH+IL D++SK PLAPA D + + + W +++++AEE G Sbjct: 205 SDRSQLAAARSGFKNPQEHIILDDVLSKEPLAPASDGQDQKLADAMRWVVFSLISAEEQG 264 Query: 256 ITQKNIN---QVSKDTTNPDVQ---RFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEM 309 IT+ NI+ Q++K+ NP ++ RFLGID +GE +GL+ D+ ++I GNYGE+ Sbjct: 265 ITKSNIDKKVQIAKN--NPQLKPLRRFLGID--GGLGEKIGLSNDFVVKVISSTGNYGEI 320 Query: 310 FDRNLGNQSELKIPRGYNALWSKGGLMYAPP 340 ++R+LG SE+ IPRG N L+ KGG+ +PP Sbjct: 321 YERHLGQNSEVPIPRGQNELYKKGGVHISPP 351 >gi|113953701|ref|YP_730400.1| polar amino acid ABC transporter periplasmic amino acid-binding protein [Synechococcus sp. CC9311] gi|113881052|gb|ABI46010.1| polar amino amino acid ABC transporter (PAAT) family, periplasmic amino acid-binding protein [Synechococcus sp. CC9311] Length = 381 Score = 277 bits (709), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 137/354 (38%), Positives = 219/354 (61%), Gaps = 16/354 (4%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGD--------IKKRGFLKCGINTGLVGFAEVKANG 54 K V +L L ++ F + LG+ IK+R L+CG++ + GF+ ++ +G Sbjct: 30 KQMRVHLLALPLVSFLFILNGCATLGEGGASRLDLIKRRAELRCGVSGKIPGFSFLRRDG 89 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI-- 112 + G DVD CRA ++A+ P ++QY L A ERF AL++ +ID+LSRNT + L R+ Sbjct: 90 SFAGLDVDICRAFAAALTGSPDQVQYRSLTAPERFTALRTGEIDLLSRNTTFNLSRDAVG 149 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 G++F P+ + DGQG ++ ++ G+S ++ L G +ICV +GTTTE L D F+A + Y Sbjct: 150 GNGVSFAPVVFHDGQGLLVKRQSGVSDLNDLQGKTICVGSGTTTEQNLNDAFQARGIDYK 209 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 PI ++ + ++ A Y RC A T D S L A + + P +HVILP+++SK PLAP Sbjct: 210 PIKYQDLNQVIAGYLQGRCSAMTSDRSQLAAARSGFNNPEQHVILPEVLSKEPLAPLAAG 269 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNI-NQVSKDTTNPD---VQRFLGIDKSSNIGEA 288 GD + + W YA++ AEELGITQ+NI +++ + P+ ++RFLG++ +GE Sbjct: 270 GDQRLADAMRWVIYALIAAEELGITQQNIGDKLEEAQRRPELTQLRRFLGVE--GELGEK 327 Query: 289 LGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 LGL D+ ++I+ +GNYGE+++R+LG S + IPRG N L+ GG++ +PP + Sbjct: 328 LGLNNDFIVKVIQAVGNYGEIYNRHLGPDSAVPIPRGLNNLYRNGGVLTSPPFQ 381 >gi|78213330|ref|YP_382109.1| extracellular solute-binding protein [Synechococcus sp. CC9605] gi|78197789|gb|ABB35554.1| extracellular solute-binding protein, family 3 [Synechococcus sp. CC9605] Length = 353 Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 141/326 (43%), Positives = 199/326 (61%), Gaps = 8/326 (2%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 S S L +K RG L CG++ + GF+ + +G + G DVD CRA+++A D K+QY Sbjct: 28 SAAGSRLDLVKARGELLCGVSGKIPGFSFLNPDGRYTGLDVDICRAMAAAFVGDAEKVQY 87 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREI--SLGLAFRPITYFDGQGFIMHKKKGIS 138 PL A ERF AL+S +ID+LSRNT TL R+ GL F P+ + DGQG +++ G+ Sbjct: 88 RPLTAPERFTALRSGEIDLLSRNTTHTLSRDAMGGNGLRFGPVVFHDGQGLMVNAASGVR 147 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 S++ LSG SICV +GTTTE L D F + + Y PI ++ + ++ Y RC+A T D Sbjct: 148 SLADLSGKSICVGSGTTTEQNLNDAFASQGLPYTPIKYQDLNQVVGGYLQGRCEAMTSDR 207 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 S L A + P H IL D ISK PLAPA++ GD + ++W A++ AEE GITQ Sbjct: 208 SQLAAARSGFSDPQAHQILDDRISKEPLAPAVVGGDQPMGDAMTWVVNALIEAEERGITQ 267 Query: 259 KNINQVSK----DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNL 314 N++ V K D + ++RFLG+D +G LGL D+ ++IR GNYGE+++R+L Sbjct: 268 ANVDAVVKQAAADPSQTSLRRFLGVDP--GLGRKLGLADDFVVQVIRATGNYGEIYNRHL 325 Query: 315 GNQSELKIPRGYNALWSKGGLMYAPP 340 G S + IPRG N L +GGLM +PP Sbjct: 326 GLDSAVAIPRGANRLAGEGGLMISPP 351 >gi|33865374|ref|NP_896933.1| ABC transporter, substrate binding protein for amino acids [Synechococcus sp. WH 8102] gi|33632543|emb|CAE07355.1| ABC transporter, substrate binding protein for amino acids [Synechococcus sp. WH 8102] Length = 353 Score = 276 bits (707), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 139/317 (43%), Positives = 194/317 (61%), Gaps = 8/317 (2%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 +K+R L CG++ + GF+ + G + G DVD CRA+++A D K+QY PL A ERF Sbjct: 37 VKQRDELLCGVSGKIPGFSFLTPKGTYTGLDVDICRAMAAAFLGDADKVQYRPLTAPERF 96 Query: 90 LALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 AL+S +ID+LSRNT TL R E GL F P+ + DGQG I+ G++S++ LSG + Sbjct: 97 TALRSGEIDLLSRNTTHTLSRDAEGGNGLGFAPVVFHDGQGLIVPVNSGVTSLADLSGQA 156 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 ICV +GTTTE L D F + + Y PI ++ + ++ Y RC A T D S L A + Sbjct: 157 ICVGSGTTTEQNLNDAFASKGIPYTPIKYQDLNQVVGGYLQGRCQAMTSDRSQLAAARSG 216 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ---- 263 P HVIL D +SK PLAPA++ GD + ++W YA++ AEE GITQ N+++ Sbjct: 217 FIEPEGHVILEDRLSKEPLAPAVVGGDQRLVDAMTWVVYALIEAEERGITQANLDRQLRA 276 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 D + ++RFLG+D +G LGL D+ + IR GNYGE++DR+LG +S + IP Sbjct: 277 AEADPSQAAMRRFLGVD--GGLGRKLGLPDDFVVQAIRATGNYGEIYDRHLGPESPVAIP 334 Query: 324 RGYNALWSKGGLMYAPP 340 RG N L GGLM APP Sbjct: 335 RGANRLAEDGGLMIAPP 351 >gi|123966465|ref|YP_001011546.1| ABC transporter for amino acids, substrate binding protein [Prochlorococcus marinus str. MIT 9515] gi|123200831|gb|ABM72439.1| ABC transporter for amino acids, substrate binding protein [Prochlorococcus marinus str. MIT 9515] Length = 349 Score = 276 bits (706), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 141/324 (43%), Positives = 207/324 (63%), Gaps = 8/324 (2%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 N S L I+KR L CG++ + GF+ ++ +G +KG DVD C+A +SAI D KIQ+ P Sbjct: 26 NISRLSLIQKRDELICGVSGKIPGFSFIERDGKYKGLDVDICKAFASAIIGDSEKIQFRP 85 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREI--SLGLAFRPITYFDGQGFIMHKKKGISSV 140 L A ERFLA+++ ID+LSRNT +TL R+ GL F P+ + DGQG ++ K GI S+ Sbjct: 86 LTAAERFLAIKTGDIDLLSRNTTFTLSRDSFEGNGLTFAPVVFHDGQGLMVKKNSGIDSI 145 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 +L+ SICV +GTTTE + D F++ ++ Y PI ++ + ++ A Y RC+A T D S Sbjct: 146 QELANKSICVGSGTTTEQNINDTFESLSLPYVPIKYQDLNQVVAGYLQGRCEAMTSDRSQ 205 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L A + +H+IL +++SK PLAPA + + + + WT +A++ AEE GITQ N Sbjct: 206 LAAARSGFKNAKDHIILDNVLSKEPLAPASNGSEQKLADAMRWTIFALIAAEEQGITQLN 265 Query: 261 I-NQVSKDTTNPDVQ---RFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316 I ++V NP ++ RFLGID +GE +GL D+ +I+ GNYGE++DRNLG Sbjct: 266 IDDKVQLAKNNPQLKSLRRFLGID--GGLGEKIGLRNDFVVNVIKATGNYGEIYDRNLGK 323 Query: 317 QSELKIPRGYNALWSKGGLMYAPP 340 S++ IPRG N ++SKGGL +PP Sbjct: 324 DSDVPIPRGLNKIYSKGGLHISPP 347 >gi|116072941|ref|ZP_01470203.1| ABC transporter for amino acids, substrate binding protein [Synechococcus sp. RS9916] gi|116068246|gb|EAU73998.1| ABC transporter for amino acids, substrate binding protein [Synechococcus sp. RS9916] Length = 349 Score = 276 bits (706), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 138/325 (42%), Positives = 201/325 (61%), Gaps = 8/325 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 AS LG I++R L+CG++ + GF+ ++ NG + G DVD C+A ++A D + ++Y PL Sbjct: 27 ASRLGLIQQRKSLRCGVSGKIPGFSFLRPNGSYSGLDVDLCKAFAAAFVGDATAVEYRPL 86 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLG--LAFRPITYFDGQGFIMHKKKGISSVS 141 A ERF AL++ +ID+LSRNT + L R+ + G ++F P+ + DGQG I+ K GI ++ Sbjct: 87 TAPERFTALRTGEIDLLSRNTTFNLSRDAAGGNGVSFAPVVFHDGQGLIVKKTSGIRQLT 146 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L SICV +GTTTE L D +A + Y PI ++ + ++ A Y RC A T D S L Sbjct: 147 DLRNQSICVGSGTTTEQNLNDALEAQGIAYTPIKYQDLNQVVAGYLQDRCSAMTSDRSQL 206 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 A + P EHVIL ++SK PLAP + GD + + W YA++TAEELG+TQ N+ Sbjct: 207 AAARSGFANPQEHVILNAVLSKEPLAPLSVGGDQRLGDAMRWVVYALITAEELGLTQANV 266 Query: 262 NQ-VSKDTTNP---DVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQ 317 + ++K NP ++RFLG+D +G LGL D+ R+I GNYGE+++R+LG Sbjct: 267 QERLAKAQNNPQMTQLRRFLGVD--GELGTKLGLAPDFVVRVIEATGNYGEIYNRHLGPD 324 Query: 318 SELKIPRGYNALWSKGGLMYAPPIR 342 S + IPRG N L GG M APP + Sbjct: 325 SAVPIPRGLNQLHRDGGAMTAPPFQ 349 >gi|78184422|ref|YP_376857.1| extracellular solute-binding protein [Synechococcus sp. CC9902] gi|78168716|gb|ABB25813.1| extracellular solute-binding protein, family 3 [Synechococcus sp. CC9902] Length = 367 Score = 276 bits (705), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 137/317 (43%), Positives = 198/317 (62%), Gaps = 8/317 (2%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 ++ RG L CG++ + GF+ + G + GFDVD C+A+++A D +K+QY PL A ERF Sbjct: 51 VQSRGELLCGVSGKIPGFSFLSPEGRYAGFDVDICKAMAAAFVGDSAKVQYRPLTAPERF 110 Query: 90 LALQSKQIDILSRNTDWTLLREISLG--LAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 AL+S +ID+LSRNT TL R+ + G L+F P + DGQG ++ G+ S++ LSG + Sbjct: 111 TALRSGEIDLLSRNTTHTLSRDAAGGNGLSFAPTVFHDGQGLMVSVGSGVRSIADLSGKA 170 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 ICV +GTTTE L D F A + Y PI ++ + ++ Y RC A T D S L + + Sbjct: 171 ICVGSGTTTEQNLNDAFAAQGLPYTPIKYQDLNQVVGGYLQGRCAAMTSDRSQLASARSG 230 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK- 266 P +HVIL D +SK PLAPA++ GD + +W YA++ AEE GITQ N++ V + Sbjct: 231 FKDPQQHVILEDRLSKEPLAPAVVGGDQRMADATNWVVYALIEAEERGITQANLDDVLER 290 Query: 267 ---DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 D + ++RFLG+D +G LGL D+ ++IR GNYGE+++R+LG S + IP Sbjct: 291 AVADPSQAALRRFLGVD--GGLGAKLGLPDDFVVQVIRATGNYGEIYNRHLGPGSAVTIP 348 Query: 324 RGYNALWSKGGLMYAPP 340 RG N L +GGLM APP Sbjct: 349 RGPNRLGVEGGLMIAPP 365 >gi|124022922|ref|YP_001017229.1| amino acid ABC transporter substrate-binding protein [Prochlorococcus marinus str. MIT 9303] gi|123963208|gb|ABM77964.1| ABC transporter for amino acids, substrate binding protein [Prochlorococcus marinus str. MIT 9303] Length = 349 Score = 275 bits (704), Expect = 6e-72, Method: Compositional matrix adjust. Identities = 140/349 (40%), Positives = 213/349 (61%), Gaps = 11/349 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTN---ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M + F ++ L +L S + S L I KRG L CG++ + GF+ + NG ++ Sbjct: 1 MIRRFATGLVTLSLLATGCASIDQGGGSRLELISKRGQLHCGVSGKIPGFSFLLGNGRYE 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG-- 115 G DVD CRA+++A+ D +K+QY PL A ERF AL++ +ID+LSRNT L R+ + G Sbjct: 61 GLDVDICRAMAAAVVGDATKVQYRPLTAPERFTALKTGEIDLLSRNTTLNLSRDAAGGNG 120 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 L F P+ + DGQG ++ + GI + L ++ICV +GTTTE L D F+ + Y PI Sbjct: 121 LTFAPVVFHDGQGLMVKRSTGIKGLQDLKASNICVGSGTTTEQNLNDAFQERKLSYTPIK 180 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 ++ + ++ A Y RC A T D S L A + P +H+IL ++SK PLAPA + GD Sbjct: 181 YQDLNQVVAGYLQGRCLAMTSDRSQLAAARSGFPDPEQHIILDVVLSKEPLAPASVGGDQ 240 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNIN-QVSKDTTNPD---VQRFLGIDKSSNIGEALGL 291 + + W +A+ AEE GITQ+N++ ++ + TNP ++RFLG+D + +G+ LGL Sbjct: 241 RLGDAIRWVVFALFAAEEFGITQENVDSKLQQAKTNPQMSSLRRFLGVD--AGLGQKLGL 298 Query: 292 TKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPP 340 D+ ++IR GNYGE+++R+LG S + IPRG N + +GGL+ APP Sbjct: 299 ADDFVVKVIRATGNYGEIYNRHLGPNSSVPIPRGLNRSYRQGGLLIAPP 347 >gi|297567745|ref|YP_003686716.1| hypothetical protein Mesil_3397 [Meiothermus silvanus DSM 9946] gi|296852194|gb|ADH65208.1| hypothetical protein Mesil_3397 [Meiothermus silvanus DSM 9946] Length = 345 Score = 275 bits (703), Expect = 6e-72, Method: Compositional matrix adjust. Identities = 140/322 (43%), Positives = 209/322 (64%), Gaps = 8/322 (2%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 S L +K RG L CG+N L GF + + G GFDVDFCRA+++A+FDDP K++Y+PL Sbjct: 28 SRLDVVKGRGKLVCGVNARLPGFGFLDEKTGKATGFDVDFCRAVAAALFDDPEKVEYVPL 87 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 +A+ RF A+Q+ ++D+ RNT T R+ ++G+ F P+T++DGQG +M KK SS+ +L Sbjct: 88 DARVRFQAVQNGEVDVAFRNTTVTSSRDGAVGVDFLPVTFYDGQG-VMVKKGKASSLREL 146 Query: 144 SGASICVQAGTTTELTLADYFKAHNMK-YHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 GA+ C GTT E ++DY ++ + + FE +++ AA RCDA+T D S L Sbjct: 147 EGATFCTTQGTTNEKNISDYIRSRRWRNTRLLTFEDGQKVFAALLEGRCDAFTADKSQLV 206 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 + T P + +IL + ISK PLA + + D+ W + ++W YA + AEE GIT KN++ Sbjct: 207 GYRGTASNPDDLLILRETISKEPLAGMVRENDSRWRDALTWIVYATIQAEEFGITVKNLD 266 Query: 263 QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKI 322 Q +K P+V+RFLG++ +G+ LGL D+ RI+RH+GNYGE++DR G +S I Sbjct: 267 QQTKSDV-PEVRRFLGLE--GTLGKDLGLPPDFAVRIVRHVGNYGEIYDRYFGPKSAFAI 323 Query: 323 PRG--YNALWSKGGLMYAPPIR 342 PR NAL++KGGL+Y+PP R Sbjct: 324 PRAGTLNALYNKGGLLYSPPFR 345 >gi|218516840|ref|ZP_03513680.1| general L-amino acid ABC transporter, substrate-binding protein [Rhizobium etli 8C-3] Length = 211 Score = 275 bits (703), Expect = 8e-72, Method: Compositional matrix adjust. Identities = 118/205 (57%), Positives = 165/205 (80%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + +A+ LGD+K +GF++CG+NTGL GFA A+G+W GFDVDFC+A++SA+F DP+K+++ Sbjct: 7 AASATTLGDVKAKGFVQCGVNTGLAGFAAPDASGNWAGFDVDFCKAVASAVFGDPTKVKF 66 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 PL+A RF ALQS +ID+L+RNT W++ R+ +LGL FR + Y+DGQGF++ K + S Sbjct: 67 TPLSAANRFPALQSGEIDVLARNTTWSINRDTALGLNFRFVNYYDGQGFMVRKSLNVKSA 126 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 +LSGAS+CVQ+GTTTEL LADYFKA+N++Y+P+VFE+++E++AAY A RCD YT D S Sbjct: 127 LELSGASVCVQSGTTTELNLADYFKANNLQYNPVVFEKLDEVNAAYDAGRCDVYTTDQSG 186 Query: 201 LYALKLTNDRPSEHVILPDIISKSP 225 LY+L+LT P EH ILP+IISK P Sbjct: 187 LYSLRLTLKNPDEHAILPEIISKEP 211 >gi|33240126|ref|NP_875068.1| amino acid ABC transporter periplasmic protein [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33237653|gb|AAP99720.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 350 Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 141/349 (40%), Positives = 220/349 (63%), Gaps = 15/349 (4%) Query: 3 KDFFVSILCLIILFFTSFST---NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 K FF ++ L IL ST NAS L IKKR L CG++ + GF+ ++ +G ++G Sbjct: 4 KRFFSGMMTLSILLTGCASTGERNASRLQLIKKRNSLICGVSGKIPGFSFLETDGTYQGL 63 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI--SLGLA 117 D+D C+A ++A D ++QY PL A ERF A+++ +ID+LSRNT + L R+ GL Sbjct: 64 DIDICKAFAAAFIGDSKRVQYRPLTAAERFTAVRTGEIDLLSRNTTFNLSRDSIGGNGLT 123 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F P+ + DGQG ++ + I+++ L+ SICV +GTTTE + D F+A ++ Y PI ++ Sbjct: 124 FAPVIFHDGQGLMVKRNSRINTIESLANKSICVGSGTTTEQNINDAFEAISLPYTPIKYQ 183 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + ++ A Y RC A T D S L A + +P +H+IL DI+SK PLAPA GD + Sbjct: 184 DLNQVVAGYLQGRCSAMTSDRSQLAAARSGFPKPEDHIILNDILSKEPLAPASSGGDQKL 243 Query: 238 YNIVSWTHYAMVTAEELGITQKNIN---QVSKDTTNPDVQ---RFLGIDKSSNIGEALGL 291 + + W +++++AEE GIT+ NI Q++++ NP ++ RFLG++ ++GE +GL Sbjct: 244 SDAMRWVIFSLISAEEQGITKGNIKEKLQIAQN--NPQMKSLRRFLGVE--GDLGEKIGL 299 Query: 292 TKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPP 340 D+ ++I GNYGE+++R+LG SE+ IPRG N L++KGG+ APP Sbjct: 300 ANDFVVKVISSTGNYGEIYNRHLGINSEVPIPRGLNKLYNKGGVQIAPP 348 >gi|33863169|ref|NP_894729.1| ABC transporter for amino acids, substrate binding protein [Prochlorococcus marinus str. MIT 9313] gi|33635086|emb|CAE21072.1| ABC transporter for amino acids, substrate binding protein [Prochlorococcus marinus str. MIT 9313] Length = 349 Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 133/317 (41%), Positives = 200/317 (63%), Gaps = 8/317 (2%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 I KRG L CG++ + GF+ + NG ++G DVD CRA+++A D +K+QY PL A ERF Sbjct: 33 ISKRGQLNCGVSGKIPGFSFLLGNGRYEGLDVDICRAMAAAFIGDATKVQYRPLTAPERF 92 Query: 90 LALQSKQIDILSRNTDWTLLREISLG--LAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 AL++ +ID+LSRNT L R+ + G L F P+ + DGQG ++ + GI + L ++ Sbjct: 93 TALKTGEIDLLSRNTTLNLSRDAAGGNGLTFAPVVFHDGQGLMVKRSSGIKGLQDLKASN 152 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 ICV +GTTTE L D F+ + Y PI ++ + ++ A Y RC A T D S L A + Sbjct: 153 ICVGSGTTTEQNLNDAFQERKLSYTPIKYQDLNQVVAGYLQGRCLAMTSDRSQLAAARSG 212 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN-QVSK 266 P +H+IL ++SK PLAPA + GD + + W +A+ AEE GITQ+N++ ++ + Sbjct: 213 FPDPEQHIILDVVLSKEPLAPASVGGDQRLGDAIRWVVFALFAAEEFGITQENVDSKLEQ 272 Query: 267 DTTNPD---VQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 TNP ++RFLG+D + +G+ LGL D+ ++IR GNYGE+++R+LG S + IP Sbjct: 273 AQTNPQMSSLRRFLGVD--AGLGQKLGLVDDFVVKVIRATGNYGEIYNRHLGPNSSVPIP 330 Query: 324 RGYNALWSKGGLMYAPP 340 RG N + +GGL+ APP Sbjct: 331 RGRNRSYRQGGLLIAPP 347 >gi|260434256|ref|ZP_05788226.1| general L-amino acid-binding periplasmic protein AapJ [Synechococcus sp. WH 8109] gi|260412130|gb|EEX05426.1| general L-amino acid-binding periplasmic protein AapJ [Synechococcus sp. WH 8109] Length = 368 Score = 273 bits (697), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 139/326 (42%), Positives = 199/326 (61%), Gaps = 8/326 (2%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 S S L +K RG L CG++ + GF+ + ++G + G DVD CRA+++A D K+QY Sbjct: 43 SAAGSRLDLVKARGELLCGVSGKIPGFSFLSSDGRYTGLDVDICRAMAAAFVGDAEKVQY 102 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREI--SLGLAFRPITYFDGQGFIMHKKKGIS 138 PL A ERF AL+S +ID+LSRNT TL R+ GL F P+ + DGQG +++ G+ Sbjct: 103 RPLTAPERFTALRSGEIDLLSRNTTHTLSRDAVGGNGLRFGPVVFHDGQGLMVNAASGVR 162 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 S++ LSG SICV +GTTTE L D F + + Y PI ++ + ++ Y RC A T D Sbjct: 163 SLADLSGKSICVGSGTTTEQNLNDAFASKGLPYIPIKYQDLNQVVGGYLQGRCAAMTSDR 222 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 S L A + P H IL D ISK PL+PA++ GD + ++W ++ AEE GITQ Sbjct: 223 SQLAAARSGFSDPEAHQILDDRISKEPLSPAVVGGDQPMGDAMTWVINGLIEAEERGITQ 282 Query: 259 KNINQVSK----DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNL 314 N++ V K D++ ++RFLG+D +G LGL D+ ++IR GNYGE+++R+L Sbjct: 283 ANVDAVVKQAAADSSQTALRRFLGVDP--GLGRKLGLADDFVVQVIRATGNYGEIYNRHL 340 Query: 315 GNQSELKIPRGYNALWSKGGLMYAPP 340 G S + IPRG N L +GGLM +PP Sbjct: 341 GPDSAVAIPRGANRLAGEGGLMISPP 366 >gi|78779551|ref|YP_397663.1| extracellular solute-binding protein [Prochlorococcus marinus str. MIT 9312] gi|78713050|gb|ABB50227.1| amino acid ABC transporter substrate-binding protein, PAAT family [Prochlorococcus marinus str. MIT 9312] Length = 349 Score = 272 bits (695), Expect = 7e-71, Method: Compositional matrix adjust. Identities = 138/324 (42%), Positives = 205/324 (63%), Gaps = 8/324 (2%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 N S L I++R L CG++ + GF+ ++ +G +KG DVD C+A ++AI D KIQ+ P Sbjct: 26 NISRLSLIQERDELICGVSGKIPGFSFIERDGSYKGLDVDICKAFAAAIIGDSEKIQFRP 85 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREI--SLGLAFRPITYFDGQGFIMHKKKGISSV 140 L A ERFLA+++ ID+LSRNT TL R+ GL F P+ + DGQG ++ K GI S+ Sbjct: 86 LTAAERFLAIKTGDIDLLSRNTTLTLSRDSFGGNGLTFAPVVFHDGQGLMVKKNSGIESI 145 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 +L+ SICV +GTTTE + D F++ ++ Y PI ++ + ++ A Y RC A T D S Sbjct: 146 QELANKSICVGSGTTTEQNINDTFESLSLPYVPIKYQDLNQVVAGYLQGRCQAMTSDRSQ 205 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L A + +H+IL D++SK PLAPA + + + + WT +A++ AEE GITQ N Sbjct: 206 LAAARSGFKNAKDHIILDDVLSKEPLAPASDGSEQKLADAMRWTVFALIAAEEQGITQSN 265 Query: 261 I-NQVSKDTTNPDVQ---RFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316 I +++ NP ++ RFLG+D +GE +GL D+ +I+ GNYGE++DRNLG Sbjct: 266 IADRLQLAKNNPQLKSLRRFLGVD--GGLGEKIGLRNDFVVNVIKATGNYGEIYDRNLGI 323 Query: 317 QSELKIPRGYNALWSKGGLMYAPP 340 S++ IPRG N ++SKGGL +PP Sbjct: 324 DSDVPIPRGLNEIYSKGGLHISPP 347 >gi|170690235|ref|ZP_02881402.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] gi|170144670|gb|EDT12831.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] Length = 345 Score = 271 bits (694), Expect = 8e-71, Method: Compositional matrix adjust. Identities = 136/325 (41%), Positives = 189/325 (58%), Gaps = 6/325 (1%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 S + + L +K RG L+CG++ G+ GF+ A G W G DVDFCRAL++A D K+ Sbjct: 26 SNAADGEALASVKTRGVLRCGVSEGVAGFSSQDAAGQWSGIDVDFCRALAAAALGDSRKV 85 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 ++PL A ERF AL++++ID+LSRNT WTLLRE +L F + ++D Q F++ Sbjct: 86 AFVPLKASERFPALETRRIDVLSRNTTWTLLREGALKAQFAGVLFYDNQAFMVPAASASQ 145 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 L GA++CVQ T+T L Y A P+V +E A+ A RC AYT D Sbjct: 146 LAGALKGATVCVQKDTSTLSHLIAYSDASGADIKPLVAGSADEARRAFFAGRCAAYTADA 205 Query: 199 SALYALKLTNDRPSEH-VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 S L AL L S+ ILP+ ISK PL P + GD W +V W ++ AEE+ +T Sbjct: 206 SYLAALLLHAPGGSQAFAILPERISKEPLGPVVRGGDQAWLTLVRWVLLTLIAAEEMDVT 265 Query: 258 QKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQ 317 ++N+ + NP V R L D + + +G+ WT R + +GNYG+MFDRN+G Sbjct: 266 RENLEIRLR---NPSVSRALVPDDT--VTRTIGVEPGWTVRALESVGNYGQMFDRNVGAH 320 Query: 318 SELKIPRGYNALWSKGGLMYAPPIR 342 S L + RG N LW++GGLMYAPPIR Sbjct: 321 SPLGLARGTNDLWTRGGLMYAPPIR 345 >gi|317970283|ref|ZP_07971673.1| extracellular solute-binding protein [Synechococcus sp. CB0205] Length = 354 Score = 271 bits (694), Expect = 8e-71, Method: Compositional matrix adjust. Identities = 132/322 (40%), Positives = 199/322 (61%), Gaps = 8/322 (2%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L +K RG L CG++ L GF+ V +G ++GF+VD CRA+++ + DP+K+++ L+A Sbjct: 35 LAAVKARGQLVCGVDGKLPGFSFVAPDGRYQGFEVDLCRAVAAGVLSDPAKVEFRDLSAS 94 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLG--LAFRPITYFDGQGFIMHKKKGISSVSQLS 144 ERF A+ S ++D+LSR+T TL R+ + G L+F PI ++ GQ +++ GI+ + QL+ Sbjct: 95 ERFAAVNSGEVDLLSRSTTMTLSRDAAGGNALSFAPIHFYGGQAVMVNAGSGITYLKQLA 154 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G ICV GTTTEL LAD + N Y P+ F+ + AY RC A T D + L A Sbjct: 155 GKPICVTTGTTTELNLADRMRELNAAYMPLKFQNDGQTYGAYLQGRCVAVTSDRALLAAK 214 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN-- 262 + + P HV+L +SK PLA + GD W + V W YA++ AEE GITQ N+ Sbjct: 215 RSSFPDPKAHVLLAGDLSKEPLAMGTVNGDPAWADAVRWIAYALMQAEESGITQANVEAK 274 Query: 263 --QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSEL 320 + D+ D++RFLG+D +G+ LGL D+ ++I+ +GNYGE+F+RNLG + + Sbjct: 275 LAEAQADSNQADLRRFLGVD--GQLGQQLGLPADFVVQVIKAVGNYGEIFERNLGVNTRI 332 Query: 321 KIPRGYNALWSKGGLMYAPPIR 342 + RG N W+ GGL+Y+PP R Sbjct: 333 NLERGTNRQWTDGGLIYSPPFR 354 >gi|148655565|ref|YP_001275770.1| extracellular solute-binding protein [Roseiflexus sp. RS-1] gi|148567675|gb|ABQ89820.1| extracellular solute-binding protein, family 3 [Roseiflexus sp. RS-1] Length = 415 Score = 271 bits (693), Expect = 9e-71, Method: Compositional matrix adjust. Identities = 135/324 (41%), Positives = 203/324 (62%), Gaps = 10/324 (3%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 IL +K+RG+L CG N L GF + W GFDVDFCRA+++AIF D +K++++ L Sbjct: 95 ILARVKERGYLICGTNADLPGFGFYDSVRQTWSGFDVDFCRAVAAAIFGDATKVEFVALG 154 Query: 85 A----KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 RF A++ ++D+L RNT WTL R IS GLAF P T+ DGQ F++ K I+ + Sbjct: 155 TGPGPNNRFDAVREGRVDVLFRNTTWTLGRNIS-GLAFGPTTFHDGQTFMVRAKDRITKL 213 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L G ICV GTT+E L D F A +++ V + +E+ AY CDA T D S Sbjct: 214 EDLEGKVICVAKGTTSEQNLNDDFAARGIRFTARVLDGEDELYPAYDEGECDAVTSDSSQ 273 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L A + P++H+IL D IS+ PL P I + D +W +++SWT +A + AEEL + Q+N Sbjct: 274 LAAKRQQLKNPADHIILGDRISREPLGPVIARDDNQWLDVISWTVFATIYAEELRVDQRN 333 Query: 261 INQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSEL 320 ++++ TT+P ++R LG++ N GE LGL D+ Y+II+ +GNYG++++RNLG + + Sbjct: 334 VDRLRTSTTDPRIKRLLGLE--GNFGEGLGLPNDFAYQIIKQVGNYGDIYNRNLGPNTVI 391 Query: 321 KIPRGYNALWS--KGGLMYAPPIR 342 + RG N +W+ GG++ +PP R Sbjct: 392 NLDRGPNKVWNLGAGGVLASPPFR 415 >gi|326204744|ref|ZP_08194599.1| extracellular solute-binding protein family 3 [Clostridium papyrosolvens DSM 2782] gi|325985115|gb|EGD45956.1| extracellular solute-binding protein family 3 [Clostridium papyrosolvens DSM 2782] Length = 363 Score = 271 bits (692), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 130/316 (41%), Positives = 197/316 (62%), Gaps = 3/316 (0%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 SIL +K RG + G +T L GF ++ +G + GFD++ +A ++AI DP+ + P+ Sbjct: 49 SILQKVKARGKVYIGCDTVLPGFGFLETDGKYSGFDIEIGKAFAAAILGDPNAAEMKPVT 108 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 + RF ALQ+ +IDILSR T ++ R+ +LG+ F P ++DGQG ++ K K + + L Sbjct: 109 GQTRFTALQTGEIDILSRATTMSITRDTTLGIRFLPTDFYDGQGIMVKKNKNVKTFKDLD 168 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G I V+ GTTTE + A K + +VFE + I +AY A DA+T D S L + Sbjct: 169 GMRIGVEQGTTTEKNVTTKLAAVGAKANIVVFENQDSIVSAYEAGSIDAWTSDKSGLVSR 228 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 + EH IL + +SK PL PAI GD +W+N+ WT YA++ AEELGITQ N+ ++ Sbjct: 229 LAGMSKQDEHAILEETLSKEPLTPAIKAGDDQWFNVTRWTLYALMQAEELGITQANVEEM 288 Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324 K + +P ++ LG + ++G+ LGL+ DW ++I+ +GNYGE+++R LG S K+ R Sbjct: 289 VK-SDDPSIRSLLGAE--GDLGKNLGLSNDWVVKLIKGVGNYGEIYERTLGQGSAFKLDR 345 Query: 325 GYNALWSKGGLMYAPP 340 G NALW+ GGLMY+PP Sbjct: 346 GLNALWTDGGLMYSPP 361 >gi|88808790|ref|ZP_01124300.1| ABC transporter for amino acids, substrate binding protein [Synechococcus sp. WH 7805] gi|88787778|gb|EAR18935.1| ABC transporter for amino acids, substrate binding protein [Synechococcus sp. WH 7805] Length = 338 Score = 271 bits (692), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 131/325 (40%), Positives = 203/325 (62%), Gaps = 8/325 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 AS L I++RG L+CG++ + GF+ ++ +G + G DVD C+A ++A D SK++Y PL Sbjct: 16 ASRLDLIRQRGELRCGVSGKIPGFSFLERDGRYAGLDVDMCQAFAAAFVGDSSKVEYRPL 75 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLG--LAFRPITYFDGQGFIMHKKKGISSVS 141 A ERF AL++ +ID+LSRNT + L R+ S G + F P+ + DGQG ++ + GI + Sbjct: 76 TAPERFTALRTGEIDLLSRNTTFNLSRDASGGNGVTFAPVVFHDGQGLLVRRNSGIKGLD 135 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L +ICV +GTTTE L D F+A + Y P+ ++ + ++ A Y RC A T D S L Sbjct: 136 DLRDKTICVGSGTTTEQNLNDVFQARGIAYKPVKYQDLNQLVAGYLQGRCSAMTSDRSQL 195 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 + + +P+ H ILP+++SK PLAP GD + + W YA++TAEE+GIT+ N+ Sbjct: 196 ASARSGFAQPNNHQILPEVLSKEPLAPLSSGGDQRLADAMRWVVYALITAEEMGITKANV 255 Query: 262 N----QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQ 317 + + + D + ++RFLG+D +G LGL D+ +++ GNYGE++DR+LG Q Sbjct: 256 DVKLQEATSDPSKTALRRFLGVD--GELGSKLGLRNDFVVSVLKTTGNYGEIYDRHLGPQ 313 Query: 318 SELKIPRGYNALWSKGGLMYAPPIR 342 S + IPRG N L GG++ APP + Sbjct: 314 SAVPIPRGLNQLHRDGGVLIAPPFQ 338 >gi|116070918|ref|ZP_01468187.1| extracellular solute-binding protein, family 3 [Synechococcus sp. BL107] gi|116066323|gb|EAU72080.1| extracellular solute-binding protein, family 3 [Synechococcus sp. BL107] Length = 371 Score = 271 bits (692), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 136/317 (42%), Positives = 196/317 (61%), Gaps = 8/317 (2%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 ++ RG L CG++ + GF+ + +G + G DVD C+A+++A D +K+QY PL A ERF Sbjct: 55 VQTRGELLCGVSGKIPGFSFLSPDGRYAGLDVDVCKAMAAAFVGDSTKVQYRPLTAPERF 114 Query: 90 LALQSKQIDILSRNTDWTLLREISLG--LAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 AL+S +ID+LSRNT TL R+ + G L+F P + DGQG ++ G S++ LSG + Sbjct: 115 TALRSGEIDLLSRNTTHTLSRDAAGGNGLSFAPTVFHDGQGLMVSVGSGARSMADLSGKA 174 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 ICV +GTTTE L D F A + Y PI ++ + ++ Y RC A T D S L + + Sbjct: 175 ICVGSGTTTEQNLNDAFAAQGLPYTPIKYQDLNQVVGGYLQGRCAAMTSDRSQLASARSG 234 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK- 266 P +HVIL D +SK PLAPA++ GD + +W YA++ AEE GITQ N++ V + Sbjct: 235 FKDPQQHVILEDRLSKEPLAPAVVGGDQRMADATNWVVYALIEAEERGITQANLDDVLER 294 Query: 267 ---DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 D + ++RFLG+D +G LGL D+ ++IR GNYGE+++R+LG S + IP Sbjct: 295 AVADPSQAALRRFLGVD--GGLGAKLGLPDDFVVQVIRATGNYGEIYNRHLGPGSAVTIP 352 Query: 324 RGYNALWSKGGLMYAPP 340 RG N L GGLM APP Sbjct: 353 RGPNRLGRDGGLMIAPP 369 >gi|116749482|ref|YP_846169.1| extracellular solute-binding protein [Syntrophobacter fumaroxidans MPOB] gi|116698546|gb|ABK17734.1| extracellular solute-binding protein, family 3 [Syntrophobacter fumaroxidans MPOB] Length = 347 Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 129/340 (37%), Positives = 203/340 (59%), Gaps = 4/340 (1%) Query: 5 FFVSILCL-IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 F V++L ++LF + ++ L IK RG L+CG++ G+ GF+ +G W G DVDF Sbjct: 10 FLVTLLIASVLLFPENVASAGDTLIRIKARGKLRCGVSDGIPGFSWKGPDGRWTGMDVDF 69 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 CRAL++A+ DP K+ ++PL A RF AL++ ++D+L+RNT WT+ RE LG+ F + Sbjct: 70 CRALAAAVLKDPEKVDFVPLTASRRFPALKAGELDVLARNTTWTMEREAVLGILFAGVLV 129 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 +D QGF++ GI+ +SQL GA++CV G++ E +A F A N Y P+ E + Sbjct: 130 YDTQGFLVPTSSGITELSQLDGATVCVVRGSSHEEHIAQTFGARNWTYQPLQVESSVQAM 189 Query: 184 AAYRAHRCDAYTGDISALYALKL-TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 AA +C A+T + L ++ D P ++ +L + IS+ P+ P + +GD +W+ IV Sbjct: 190 AALNEGKCKAFTSESPQLKTARMNAPDGPDQYSLLKETISEEPMGPVVRRGDEDWFTIVR 249 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302 W + ++ AE+ G T N+ + T + + +D I ++LG+ W R++ Sbjct: 250 WVLFTLILAEDGGYTGANVRSRLEKTADFRAMSWKQLD--GLIAKSLGIDPGWRIRVVES 307 Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGE+F+RNLG+QS L + RG N LW GLMYAPP R Sbjct: 308 VGNYGEVFERNLGSQSTLNLERGPNKLWKDAGLMYAPPFR 347 >gi|148239754|ref|YP_001225141.1| ABC transporter, substrate binding protein for amino acids [Synechococcus sp. WH 7803] gi|147848293|emb|CAK23844.1| ABC transporter, substrate binding protein for amino acids [Synechococcus sp. WH 7803] Length = 338 Score = 268 bits (685), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 130/325 (40%), Positives = 201/325 (61%), Gaps = 8/325 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 AS L +++RG L+CG++ + GF+ + G + G DVD C+A ++A D +K++Y PL Sbjct: 16 ASRLDLVRQRGELRCGVSGKIPGFSFLDREGRYAGLDVDMCKAFAAAFVGDANKVEYRPL 75 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLG--LAFRPITYFDGQGFIMHKKKGISSVS 141 A ERF AL++ +ID+LSRNT + L R+ S G +AF P+ + DGQG ++ + GI + Sbjct: 76 TAPERFTALRTGEIDLLSRNTTFNLSRDASGGNGVAFAPVVFHDGQGLLVRRDSGIKRLE 135 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L +ICV +GTTTE L D F+A + Y P+ ++ + ++ A Y RC A T D S L Sbjct: 136 DLRNQTICVGSGTTTEQNLNDVFQAKGIPYKPVKYQDLNQLVAGYLQKRCAAMTSDRSQL 195 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 + + ++P H ILP+++SK PLAP GD + + W YA+VTAEE+GITQ N+ Sbjct: 196 ASARSGFEQPGNHQILPEVLSKEPLAPLSSGGDQRLADAMRWVVYALVTAEEMGITQNNV 255 Query: 262 N----QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQ 317 + + D + ++RFLG++ +G LGL D+ +++ GNYGE+++R+LG Q Sbjct: 256 DAKLQEAINDPSKTALRRFLGVE--GELGSKLGLPNDFVVSVLKATGNYGEIYNRHLGPQ 313 Query: 318 SELKIPRGYNALWSKGGLMYAPPIR 342 S + IPRG N L GG++ APP + Sbjct: 314 SAVPIPRGLNQLHRDGGVLIAPPFQ 338 >gi|156741676|ref|YP_001431805.1| extracellular solute-binding protein [Roseiflexus castenholzii DSM 13941] gi|156233004|gb|ABU57787.1| extracellular solute-binding protein family 3 [Roseiflexus castenholzii DSM 13941] Length = 411 Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 134/324 (41%), Positives = 202/324 (62%), Gaps = 10/324 (3%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 IL +K+RG+L CG N L GF W GFDVDFCRA+++AIF D +K++++ L Sbjct: 91 ILARVKERGYLICGTNADLPGFGFYDNVRQAWSGFDVDFCRAVAAAIFGDATKVEFVALG 150 Query: 85 A----KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 RF A++ ++D+L RNT WTL R IS GLAF P T+ DGQ F++ + I+ + Sbjct: 151 TGPGPNNRFDAVREGRVDVLFRNTTWTLGRNIS-GLAFGPTTFHDGQTFMVRIRDRITKL 209 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L+G ICV GTT+E L D F A +++ V +E+ AY CDA T D S Sbjct: 210 EDLAGKVICVAKGTTSEQNLNDDFAARGIQFTARVLNGEDELYPAYDEGECDAVTSDSSQ 269 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L A + P++H+IL D IS+ PL P I + D +W +++SWT +A + AEEL + Q+N Sbjct: 270 LAAKRQQLKNPADHIILGDRISREPLGPVIARDDNQWLDVISWTVFATIYAEELRVDQRN 329 Query: 261 INQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSEL 320 ++++ TT+P ++R LG++ N GE LGL D+ Y+II+ +GNYG++++RNLG + + Sbjct: 330 VDRLRASTTDPRIKRLLGLE--GNFGEGLGLPNDFAYQIIKQVGNYGDIYNRNLGPNTVI 387 Query: 321 KIPRGYNALWS--KGGLMYAPPIR 342 + RG N +W+ GG++ +PP R Sbjct: 388 NLDRGPNKVWNLGAGGVLASPPFR 411 >gi|83591779|ref|YP_425531.1| extracellular solute-binding protein [Rhodospirillum rubrum ATCC 11170] gi|83574693|gb|ABC21244.1| extracellular solute-binding protein, family 3 [Rhodospirillum rubrum ATCC 11170] Length = 364 Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 125/322 (38%), Positives = 186/322 (57%), Gaps = 4/322 (1%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + L +++RG+L CG+N L G V +G W+GFD+D+CRA+++A D ++++ Sbjct: 43 AAEGDTLRQVRERGYLTCGVNARLTGLGSVDPDGVWRGFDIDYCRAVAAAALGDSGRVRF 102 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISS 139 +PL+ + R LAL S ++D+LSRNT WTL R+ G++F ++ FDG G + K G Sbjct: 103 VPLDIRSRLLALTSGEVDLLSRNTTWTLERDAGQGISFVGVSLFDGPGLLAWKDLPGDDL 162 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 S A +CVQ+ T L A + + + F +EE A CD Y D + Sbjct: 163 ASLPPTARLCVQSAATAARVLPARMAAAGLSFTILPFRSLEEARMALFTRACDGYVADRT 222 Query: 200 ALYALK-LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 AL +L RP +LPD+++ PL PA+ GD W++I WT +A++ AEE G++ Sbjct: 223 ALASLATFEAPRPDALRLLPDLLAVEPLGPAVRDGDANWFDIARWTLFALIKAEEEGLSH 282 Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318 + V + T +P+++RFLG+D +G LGL W RI+ +G YGE+FDRNLG S Sbjct: 283 DRLPAVLESTQDPELRRFLGLDP--GVGAPLGLDDAWVRRIVSQVGTYGEVFDRNLGQGS 340 Query: 319 ELKIPRGYNALWSKGGLMYAPP 340 LK+ RG NAL GGLM APP Sbjct: 341 PLKLERGPNALRRDGGLMVAPP 362 >gi|148555539|ref|YP_001263121.1| extracellular solute-binding protein [Sphingomonas wittichii RW1] gi|148500729|gb|ABQ68983.1| extracellular solute-binding protein, family 3 [Sphingomonas wittichii RW1] Length = 347 Score = 262 bits (670), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 124/308 (40%), Positives = 201/308 (65%), Gaps = 5/308 (1%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 ++ RG+++CG + GF+ +G W+G DVD CRA++ A D K++++PL ++R Sbjct: 38 VRSRGYVRCGASKEAPGFSGPDESGRWRGLDVDTCRAIAVAALGDREKVRFVPLTGQQRI 97 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 ALQ+ +ID+L R T WTL R+ + G+ F TY+D F++ +K G+ ++ L GAS C Sbjct: 98 TALQTGEIDVLPRTTTWTLRRDAA-GINFTIPTYYDYTAFMVRRKVGVRDLAGLRGASAC 156 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT-N 208 VQ+G+ TE+ LAD + + + P++F+ V+ A+ + RCDA D SAL AL+ T Sbjct: 157 VQSGSMTEVILADVSRKYRLALRPVIFDNVQSTRQAFLSGRCDALITDASALAALRATLP 216 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 R ++VILP + +PL PA+ GD +W++IV ++ AM+ E+LGI + +++ + + Sbjct: 217 GRADDYVILPADSNVAPLTPAVRHGDDQWFDIVKFSIEAMIDGEQLGIGRDTADRL-RAS 275 Query: 269 TNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNA 328 +P+V+RFLG++ + G ALG++ D+ Y+I+R +GNYGE++D NLG++S L IPRG N Sbjct: 276 ADPNVRRFLGVEPGN--GRALGISDDFAYQIVRQIGNYGEVYDDNLGSRSRLNIPRGLNR 333 Query: 329 LWSKGGLM 336 L GGLM Sbjct: 334 LQRDGGLM 341 >gi|87124569|ref|ZP_01080418.1| ABC transporter for amino acids, substrate binding protein [Synechococcus sp. RS9917] gi|86168141|gb|EAQ69399.1| ABC transporter for amino acids, substrate binding protein [Synechococcus sp. RS9917] Length = 343 Score = 262 bits (670), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 133/326 (40%), Positives = 199/326 (61%), Gaps = 8/326 (2%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 AS L I++RG L+CG++ + GF+ ++ +G + G DVD C+A ++A + + Y P Sbjct: 20 GASRLDLIRQRGSLRCGVSGKIPGFSYLQTDGRYFGLDVDLCKAFAAAFVPETGAVDYRP 79 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLG--LAFRPITYFDGQGFIMHKKKGISSV 140 L A ERF AL++ +ID+LSRNT L R+ + G L+F P+ + DGQG ++ GI + Sbjct: 80 LTAPERFTALRTGEIDLLSRNTTMNLSRDAAGGNGLSFAPVVFHDGQGLMVSSGSGIKRL 139 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L G SICV +GTTTE L D F+A + Y PI ++ + ++ A Y RC A T D S Sbjct: 140 EDLQGKSICVGSGTTTEQNLNDAFEARGIAYTPIKYQDLNQVVAGYLQGRCQAMTSDRSQ 199 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L A + H IL +++SK PLAPA + GD + + W YA++TAEELGITQ N Sbjct: 200 LAAARSGFADQRNHRILEEVLSKEPLAPASVGGDQRLADAMRWVVYALITAEELGITQAN 259 Query: 261 INQ-VSKDTTNPD---VQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316 + + ++ P+ ++RF G++ + +GE LGL D+ ++I+ GNYGE++ RNLG Sbjct: 260 VQERYAEAQRRPELTRLRRFFGLN--AGLGETLGLRDDFVVQVIQATGNYGEIYARNLGP 317 Query: 317 QSELKIPRGYNALWSKGGLMYAPPIR 342 S++ IPRG N L GG+M APP + Sbjct: 318 DSQVPIPRGLNRLGRDGGVMVAPPFQ 343 >gi|323165231|gb|EFZ51021.1| general L-amino acid-binding periplasmic protein aapJ [Shigella sonnei 53G] Length = 254 Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 113/229 (49%), Positives = 163/229 (71%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + L ++K+GF++CGI+ GL GF+ A+G + G DVD CR +++A+F D +K++Y PL Sbjct: 25 GATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGIDVDVCRGVAAAVFGDDTKVKYTPL 84 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 AKERF ALQS ++D+LSRNT WT R+ +G+AF +T +DG GF+ H K G+ S +L Sbjct: 85 TAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFTGVTDYDGIGFLTHDKAGLKSAKEL 144 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R +E A + RCD D S LYA Sbjct: 145 DGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYA 204 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 L++ P+E ++LP++ISK PL P + +GD EW++IV WT +AM+ AE Sbjct: 205 LRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAE 253 >gi|317407537|gb|EFV87488.1| extracellular solute-binding protein, family 3 [Achromobacter xylosoxidans C54] Length = 329 Score = 258 bits (659), Expect = 8e-67, Method: Compositional matrix adjust. Identities = 125/317 (39%), Positives = 192/317 (60%), Gaps = 5/317 (1%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 TN+ + I+ RG++ CG G GF+ +G+WKG DVD CRA++ A+ D SK +++ Sbjct: 12 TNSPTVDQIRARGYVICGSGHGTTGFSAPDKDGNWKGLDVDTCRAIAIAVLGDASKTRFV 71 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 PL ++R ALQ+ QID+L R T WTL R+ + G+ F Y++ F++ K GI+ Sbjct: 72 PLTGQQRLTALQTGQIDVLPRTTSWTLRRDAN-GINFTYPNYYEYDAFMVRKDLGITQTK 130 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 ++GA+ICVQ G+T E+T+AD + + ++F+ V A+ + RCD D SAL Sbjct: 131 DMNGATICVQTGSTNEVTVADLSRKFKLGLKTVLFDNVAASRQAFFSGRCDGLITDASAL 190 Query: 202 YALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 A++ T P ++VI P L P++ GD W++IV W + AE++GITQ N Sbjct: 191 AAVRATQAQNPDDYVIFPASGHSEALTPSVRHGDDRWFDIVKWVIQVPIAAEDMGITQAN 250 Query: 261 INQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSEL 320 ++ + K + +P + RFLG K G+ALGL + W Y I++ +GNYGE+F+RN+G S + Sbjct: 251 VDDMLK-SDDPRIARFLG--KEPGNGKALGLDERWAYNIVKQLGNYGEIFERNVGKNSPM 307 Query: 321 KIPRGYNALWSKGGLMY 337 K+ RG N L+ GGLMY Sbjct: 308 KLERGMNRLYRDGGLMY 324 >gi|103487895|ref|YP_617456.1| extracellular solute-binding protein [Sphingopyxis alaskensis RB2256] gi|98977972|gb|ABF54123.1| extracellular solute-binding protein, family 3 [Sphingopyxis alaskensis RB2256] Length = 365 Score = 252 bits (644), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 126/323 (39%), Positives = 199/323 (61%), Gaps = 6/323 (1%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + S L I+ RG L C I+TG +G + + G W+GF VD+CRAL++A+ D K+++ Sbjct: 48 AAKGSTLARIRARGTLNCAIHTGQLGMSYLDKRGRWQGFFVDYCRALAAAVLGDARKVRF 107 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +P+ + +RF +Q+ + D+LSR T WTL R+ LG+ F Y+DGQ F++ ++ G+ Sbjct: 108 MPVASNKRFTIVQTGEADVLSRTTTWTLTRDTDLGVNFVGTMYYDGQSFLVPRRSGVRLP 167 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + L GASIC+ GTT+EL A+YF+ +++ +VFE EE A+ A RCDA T D Sbjct: 168 TDLDGASICITKGTTSELNTAEYFERKGLRFLSVVFENPEEAKLAFFAGRCDAMTTDAFT 227 Query: 201 LYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L ++L + P ++V+LP+ ++K P+ P + D +WY I W A+ AEE+G+T+ Sbjct: 228 LTVIRLADTAHPDDYVVLPERLTKEPVGPVVRSDDEQWYEINKWVLNALFAAEEMGVTRA 287 Query: 260 NINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSE 319 N ++ + +P+V++ LG G++LGL DW YR I GNYGE+FDR++ + Sbjct: 288 NAARMRMASRDPEVRKMLG--GLPGFGKSLGLDDDWAYRAIEATGNYGEIFDRHI---TP 342 Query: 320 LKIPRGYNALWSKGGLMYAPPIR 342 L + RG N L+ GGL+Y P+R Sbjct: 343 LGVERGQNKLYRDGGLIYPLPMR 365 >gi|254230451|ref|ZP_04923829.1| hypothetical protein VEx25_B0035 [Vibrio sp. Ex25] gi|151937022|gb|EDN55902.1| hypothetical protein VEx25_B0035 [Vibrio sp. Ex25] Length = 222 Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 114/225 (50%), Positives = 153/225 (68%), Gaps = 3/225 (1%) Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F + Y+DGQGF++ K GISS +L GAS+CVQ+GTTTEL LADYF+ M Y P+VF+ Sbjct: 1 FVGVNYYDGQGFMVKKDLGISSAKELDGASVCVQSGTTTELNLADYFRNSGMSYKPVVFD 60 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + + A RCD T D S LYAL+L PS +LP+IISK PL P + QGD +W Sbjct: 61 TAAQTSKGFDAGRCDVLTTDQSGLYALRLNLKDPSSAAVLPEIISKEPLGPVVRQGDDQW 120 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297 +NI WT AM+ AEE GI+ KN +++ K + +P+++R LG+D G+ LG+ DW Y Sbjct: 121 FNIAKWTLSAMINAEEYGISSKNADEMLK-SKDPNIKRILGVDGPK--GKGLGIRDDWGY 177 Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++I+ +GNYGE F+R +G S L+I RG NALW+ GG MYAPPIR Sbjct: 178 QVIKQVGNYGESFERTVGTGSPLEISRGVNALWNAGGFMYAPPIR 222 >gi|319782291|ref|YP_004141767.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168179|gb|ADV11717.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 344 Score = 249 bits (636), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 118/329 (35%), Positives = 195/329 (59%), Gaps = 3/329 (0%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKC-GINTGLVGFAEVKANGDWKGFDVDFCRALS 68 L L+ + + L +K RG L C G + +GFAEV G+WKG D+D CRA++ Sbjct: 13 LGLVHFAAPAEAAGGKTLEAVKARGVLNCTGHDGSYLGFAEVDDKGNWKGMDIDLCRAVA 72 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 +A+ DP+K++ +P++ +R+ +LQS +DI+ + + TL R+ LGL F Y Sbjct: 73 TAVLGDPAKLKVVPISWAQRWPSLQSGDVDIIIKASGGTLSRDTELGLQFSMSYYLGTTK 132 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 + HK+ + S+ +G +IC+ AGT+ E +A Y +K P++ E+ EE++ AY + Sbjct: 133 VMAHKELNLKSLKDAAGGTICIPAGTSQEQQVAAYTAKLGIKLEPVLIEKTEELEQAYFS 192 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 RCD Y L ++ + +HVILPD+++ P + QGD W +I +WT + Sbjct: 193 GRCDLYAQWGPTLAIARIAKSKVDDHVILPDVLAVEPEVMIMRQGDDNWVDIANWTLSTL 252 Query: 249 VTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGE 308 + AE+ GIT KN+++V T+P V +FLG+ + +G+ LGL DW Y++I+++GNYGE Sbjct: 253 IFAEQEGITSKNVDEVKAKPTSPQVAKFLGV--TPGMGKGLGLDDDWAYKVIKNVGNYGE 310 Query: 309 MFDRNLGNQSELKIPRGYNALWSKGGLMY 337 +F+R+LG S K+ R LW+ GG+++ Sbjct: 311 IFERDLGKDSPYKMDRELTNLWNNGGVLF 339 >gi|309791547|ref|ZP_07686046.1| extracellular solute-binding protein [Oscillochloris trichoides DG6] gi|308226407|gb|EFO80136.1| extracellular solute-binding protein [Oscillochloris trichoides DG6] Length = 404 Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 132/336 (39%), Positives = 206/336 (61%), Gaps = 9/336 (2%) Query: 13 IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAI 71 ++ T ++ +L +K RG L CG N L GF G W GFDVDFCRAL++AI Sbjct: 72 VVAEATPTPASSGLLERVKARGKLICGTNADLPGFGFYDNVRGRWSGFDVDFCRALAAAI 131 Query: 72 FDDPSKIQYLPLNA---KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 F D ++++ LN ERF +++S ++D+L RNT WTL R++S LAF P T+ DGQ Sbjct: 132 FADADAVEFVALNTSGQNERFESVRSGKVDVLFRNTTWTLGRDLSQ-LAFGPTTFHDGQT 190 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 F++ I+S++ L+G ICV GTT+ L+D F A + + ++++ ++ AY Sbjct: 191 FMVRTASQITSLNDLAGKKICVSRGTTSAQNLSDDFAARGIVFEQVLYDDENQLYPAYDQ 250 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 CDA T D S L + + T +RP +H IL + IS+ PL PA I+ D +W ++V+W +A Sbjct: 251 GACDAVTSDSSQLASKRQTLERPEDHTILGERISREPLGPAFIEHDEQWRDVVTWVVFAT 310 Query: 249 VTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGE 308 + AEEL + Q N+ Q+ ++T+P V+R LG++ + G +LGL D+ Y+IIR +GNY + Sbjct: 311 MYAEELRVDQTNVEQMKANSTDPRVRRLLGLE--GDFGTSLGLNNDFGYQIIRLVGNYAD 368 Query: 309 MFDRNLGNQSELKIPRGYNALWS--KGGLMYAPPIR 342 +++RNLG + + RG N W+ GG++ +PP R Sbjct: 369 IYNRNLGPTTPFAMDRGPNKAWNLGAGGVLASPPFR 404 >gi|330899538|gb|EGH30957.1| extracellular solute-binding protein [Pseudomonas syringae pv. japonica str. M301072PT] Length = 218 Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 109/220 (49%), Positives = 154/220 (70%), Gaps = 2/220 (0%) Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y+DG GF+++ K G++S +L GA+IC+QAGTTTEL ++DYF+++ +KY PI F+ +E Sbjct: 1 YYDGIGFLVNNKLGVNSAKELDGATICIQAGTTTELNVSDYFRSNGLKYTPITFDTSDES 60 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + RCD T D S LYA + +P ++++LP++ISK PL P + +GD EW++IV Sbjct: 61 AKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYIVLPEVISKEPLGPVVRKGDEEWFSIVR 120 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302 WT +AM+ AEE IT KN+ +K T NPDV R LG D + G+ L L KDW +I++ Sbjct: 121 WTLFAMLNAEEAKITSKNVEAEAKSTKNPDVARMLGADGT--YGQDLKLPKDWVVQIVKQ 178 Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGE+F+RNLG + LKI RG NALW+ GG+ YAPPIR Sbjct: 179 VGNYGEVFERNLGEGTPLKIKRGQNALWNAGGIQYAPPIR 218 >gi|224367657|ref|YP_002601820.1| AapJ2 [Desulfobacterium autotrophicum HRM2] gi|223690373|gb|ACN13656.1| AapJ2 [Desulfobacterium autotrophicum HRM2] Length = 219 Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 109/222 (49%), Positives = 154/222 (69%), Gaps = 3/222 (1%) Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ KK G+ +L GA++CV GTTTE +ADYF+A+ MK +P+V E Sbjct: 1 MNYYDGQGFLISKKLGVKDAKELDGATVCVLPGTTTEQNVADYFRANGMKMNPVVIENTA 60 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E+ A+ A RCD T D S L + P +++ILP IISK PLAPA+ GD +W ++ Sbjct: 61 ELAKAFFAGRCDCLTSDASQLAGTRAVAPNPDDYIILPTIISKEPLAPAVRHGDNKWKDV 120 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V+++ AM+ AEELGIT KN+++ K +T+P VQRFLG+ S G+ALGL + + Y I+ Sbjct: 121 VNYSVLAMINAEELGITSKNVDEKLK-STDPKVQRFLGV--SPGNGKALGLDEKFAYNIV 177 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGEMF+RN+G + LKI RG NALW+ GGLMY+ P + Sbjct: 178 KQVGNYGEMFERNVGMDTPLKIERGLNALWTNGGLMYSAPFK 219 >gi|117923521|ref|YP_864138.1| extracellular solute-binding protein [Magnetococcus sp. MC-1] gi|117607277|gb|ABK42732.1| amino acid ABC transporter substrate-binding protein, PAAT family [Magnetococcus sp. MC-1] Length = 342 Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 114/317 (35%), Positives = 182/317 (57%), Gaps = 4/317 (1%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L ++ RG L CG+ TG F++ + +G W GF D+CRAL+ A+ DD + ++ + Sbjct: 29 LDKVRARGLLNCGVMTGTPAFSQQQPDGAWHGFFADWCRALAVAVLDDARAVHFIQVTPA 88 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 RF AL Q+D++ NT WTL RE + F I +DGQ K +++Q + A Sbjct: 89 TRFKALTELQVDVVMSNTTWTLSREYQYQVRFPAIYLYDGQAIATRKDTRWHTLAQANQA 148 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA-LK 205 ++CV+ +T+ L +Y + +N+ ++ + + + I A+ HRCD T D AL A LK Sbjct: 149 TVCVEPNSTSHANLQEYAQRNNLNFNYLALNQ-QGIITAFLEHRCDLITDDRIALTANLK 207 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 T ++V+ + +S+ PLAP + D W IV A++ A+E G+++ + Q Sbjct: 208 TTASNDQDYVVFAETLSREPLAPMVRADDERWQRIVRMVVQALLVADEKGVSRDALKQNR 267 Query: 266 KDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRG 325 + ++P+VQR LG + G+ +GL++ W R+I +GNYGE+F R+LG QS L++PR Sbjct: 268 ERLSDPEVQRLLG--SEDDPGQFVGLSRGWARRMIEAVGNYGELFARHLGAQSSLQMPRL 325 Query: 326 YNALWSKGGLMYAPPIR 342 N WS+GGL YAPP R Sbjct: 326 LNRPWSRGGLFYAPPFR 342 >gi|209549223|ref|YP_002281140.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209534979|gb|ACI54914.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 344 Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 120/329 (36%), Positives = 196/329 (59%), Gaps = 6/329 (1%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFD 73 + FT+ +ASIL +K+RG L CG + GF + G +G DVDFC+A+++++ Sbjct: 15 MAFTATHASASILDTVKQRGVLNCGTDNTAPGFGYLNTTTGQMEGLDVDFCKAVAASVLG 74 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 D +KI+++ + K RF A+ + Q+D++ +T RE S+ + F PI ++DG G ++ Sbjct: 75 DAAKIKFITVTDKSRFDAVLTGQVDVVFAHTTIKPARESSIAIDFLPINFYDGTGLMVKA 134 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV-FERVEEIDAAYRAHRCD 192 GI + L GA+IC G+ TE LA FKA K ++ +E +E+ +A + RC+ Sbjct: 135 DAGIKEFADLDGATICTTQGSATETVLAAAFKARGWKDSKVLTYENLEKFFSALNSGRCN 194 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 A + D SAL A +P++++ILPD + KSP ++ D++W N + W Y + AE Sbjct: 195 AMSTDKSALAAWAGNAPKPADYLILPDTLDKSPFGGFVVANDSKWRNALRWIEYGLFQAE 254 Query: 253 ELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDR 312 E GITQ N+ + K + +P VQ+FLG G+ GL+ D+ + I+ +GNYGE +DR Sbjct: 255 ESGITQANLAEKLK-SEDPFVQKFLG-SNGGGYGKDFGLSDDFIAQAIKAVGNYGEAYDR 312 Query: 313 NLGNQSELKIPRGY--NALWSKGGLMYAP 339 NLG ++++ + R NALW++GG +Y+P Sbjct: 313 NLGPKTKMYLDRKGTPNALWTQGGAIYSP 341 >gi|144898062|emb|CAM74926.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Magnetospirillum gryphiswaldense MSR-1] Length = 340 Score = 231 bits (590), Expect = 9e-59, Method: Compositional matrix adjust. Identities = 119/337 (35%), Positives = 196/337 (58%), Gaps = 7/337 (2%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 ++ L LI T A L ++ RG ++CG++ + NG W GF DFCRA Sbjct: 10 LTALPLIAGLTTPPQARAGTLEEVTARGVIRCGVSEYGPALTAMNENGQWAGFYTDFCRA 69 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 ++A + + ++ +++ +RF AL+ K +D+LS + WT R++ GLAF + DG Sbjct: 70 FAAATLGNARAVDFVSVSSLDRFEALRQKAVDVLSEASTWTSERDLG-GLAFPATSMMDG 128 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 QGF++ + GIS + QL G ICV + T+ L K N+ + + ++ AA+ Sbjct: 129 QGFLVRRDGGISGLDQLKGRRICVISHATSVGGLNRVNKVRNLGFKIQEYSSIQGSFAAF 188 Query: 187 RAHRCDAYTGDISALYALKLT-NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 +CDA + D L +L+ P+++V+LP+ I++ PL+P +++ D W +I+ WT Sbjct: 189 FDRQCDAVSTDGIILASLRQQLAPNPADYVLLPERITREPLSPVVLKNDRRWEDIIRWTI 248 Query: 246 YAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGN 305 A + AEELGIT N+ Q ++T+P+++R LG+D ++G LGL K W R+I +GN Sbjct: 249 LATIAAEELGITSANVKQ-HLNSTDPEIRRLLGLD--GDMGARLGLDKAWAMRVIEQVGN 305 Query: 306 YGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 YGE+++RNL L + RG NAL S+GG++++PP R Sbjct: 306 YGEIYNRNL--TKVLGLERGQNALSSQGGILWSPPFR 340 >gi|190891654|ref|YP_001978196.1| putative amino acid ABC transporter, substrate-binding protein [Rhizobium etli CIAT 652] gi|190696933|gb|ACE91018.1| putative amino acid ABC transporter, substrate-binding protein [Rhizobium etli CIAT 652] Length = 343 Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 117/327 (35%), Positives = 194/327 (59%), Gaps = 7/327 (2%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDP 75 FT+ + +AS+L +K+RG L CG + GF + G +G DVDFC+A+++ + D Sbjct: 17 FTAANASASVLDTVKQRGVLNCGTDNTAPGFGYLNTTTGQMEGLDVDFCKAVAAGVLGDA 76 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 SK++++ + K RF A+ + Q+D++ +T RE S+ + F PI ++DG G ++ Sbjct: 77 SKVKFITVTDKSRFDAVLTGQVDVVFAHTTIKPARESSIAIDFLPINFYDGTGLMVKTDA 136 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV-FERVEEIDAAYRAHRCDAY 194 GI + L GA+IC G+ TE LA FKA K ++ +E +E++ +A + RC+A Sbjct: 137 GIKEFADLDGATICTTQGSATETVLAAAFKARGWKDSKVLTYENLEKLFSALNSGRCNAM 196 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 + D SAL A +P++++ILPD + KSP + D++W N + W Y + AEE Sbjct: 197 STDKSALAAWAGNAPKPADYLILPDTLDKSPFGGFVAANDSKWRNALRWIEYGLFQAEES 256 Query: 255 GITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNL 314 ITQ N+ + K + +P +Q+FLG+ G+ GL+ D+ + I+ +GNYGE +DRNL Sbjct: 257 EITQANLAEKLK-SEDPFIQKFLGV--GGGYGKDFGLSDDFIAQAIKAVGNYGEAYDRNL 313 Query: 315 GNQSELKIPRGY--NALWSKGGLMYAP 339 G +++ + R NALW++GG +Y+P Sbjct: 314 GPTTKMYLDRKGTPNALWTQGGAIYSP 340 >gi|110347225|ref|YP_666043.1| extracellular solute-binding protein [Mesorhizobium sp. BNC1] gi|110283336|gb|ABG61396.1| amino acid ABC transporter substrate-binding protein, PAAT family [Chelativorans sp. BNC1] Length = 340 Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 118/332 (35%), Positives = 185/332 (55%), Gaps = 7/332 (2%) Query: 14 ILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72 ++ + S NA SI +++RG++ CG + G+ G + G W GFDVD CRA+++A F Sbjct: 13 MVLIGAGSVNAQSITDKVRQRGYVSCGASQGVPGLSRPDDKGVWTGFDVDSCRAVAAAFF 72 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 D K Q++PLNA +R A+Q+ ++D+L+R T WT R+++ + F I DG ++ Sbjct: 73 GDSQKAQFVPLNAAQRIPAVQTGEVDVLARTTTWTYTRDVA--VRFVAINLVDGDAIMLR 130 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN-MKYHPIVFERVEEIDAAYRAHRC 191 K + + + L G +IC+Q G + D + N +K + F+ AY RC Sbjct: 131 KSLNVGAAADLEGLTICLQGGGSLVENALDLIEQQNQVKVERVYFDSTILARDAYFGGRC 190 Query: 192 DAYTGDISALYALKLT-NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 D Y D A+ + P EH I + PLA AI +GD W++IV + AMV Sbjct: 191 DGYMSDGFAIAGQRAAVASNPDEHAIFQSGATTEPLALAIPRGDDRWFDIVRYAFNAMVW 250 Query: 251 AEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMF 310 AE+ GIT KN+++++ T+ + ++ LG++ IGE L L W Y +I+ +GNYGE+F Sbjct: 251 AEDRGITSKNVDEIAASATDGETRKALGVE--PGIGEPLKLDDKWIYNVIKQVGNYGEVF 308 Query: 311 DRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 RNLG +S LK R NAL GG+++ P + Sbjct: 309 ARNLGEESPLKAERRLNALPRDGGILFPIPFK 340 >gi|150397299|ref|YP_001327766.1| extracellular solute-binding protein [Sinorhizobium medicae WSM419] gi|150028814|gb|ABR60931.1| extracellular solute-binding protein family 3 [Sinorhizobium medicae WSM419] Length = 343 Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 116/329 (35%), Positives = 192/329 (58%), Gaps = 7/329 (2%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFD 73 L T+ +AS+L +K+RG L CG + GF + G +G DVDFCRA+++A+ Sbjct: 15 LAVTTGQASASVLDTVKQRGTLNCGTDNTAPGFGYLNTTTGQMEGLDVDFCRAVAAAVLG 74 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 D SK++++ + K RF A+ + Q+D++ +T RE S+ + F P+ ++DG G ++ Sbjct: 75 DASKVKFVTVTDKSRFDAVLTNQVDVVFAHTTMKPARESSIAIDFLPVNFYDGTGIMVKT 134 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV-FERVEEIDAAYRAHRCD 192 + + L GA+ C G+ TE L FKA+ + ++ +E +E++ AA + RC+ Sbjct: 135 DSEVVQFADLEGATFCTTQGSVTETVLTSAFKANGWQGSKVLTYENLEKLFAALNSGRCN 194 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 A + D SAL A + +PS+++ILP+ + KSP A + D++W N + W Y + AE Sbjct: 195 AMSTDKSALAAWAGNSPKPSDYLILPETLDKSPFAGFVAANDSKWRNALRWITYGLFQAE 254 Query: 253 ELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDR 312 E ITQ N+ + K + +P VQ+FLG+ G+ GL D+ + I+ MGNYGE++ R Sbjct: 255 ESDITQANLEEKLK-SDDPFVQKFLGV--GGGYGKDFGLPDDFVAQAIKAMGNYGEIYAR 311 Query: 313 NLGNQSELKIPR--GYNALWSKGGLMYAP 339 NLG + + + R NALW++GG +Y+P Sbjct: 312 NLGPDTSMFLDRKGTPNALWTEGGAIYSP 340 >gi|117925598|ref|YP_866215.1| extracellular solute-binding protein [Magnetococcus sp. MC-1] gi|117609354|gb|ABK44809.1| amino acid ABC transporter substrate-binding protein, PAAT family [Magnetococcus sp. MC-1] Length = 360 Score = 223 bits (567), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 110/320 (34%), Positives = 177/320 (55%), Gaps = 3/320 (0%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 S + IK RG L+CG+ + + + +G+W+GF VD C AL A+ ++ + + Sbjct: 43 GSTVQGIKDRGVLRCGVEQNTLTMSAMDRDGEWRGFMVDLCHALGVALLGTTQDVEIIEV 102 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 N R+ AL+ D+L N+ WTL RE +LG+ F FDGQGF+ H K+G + +S Sbjct: 103 NKHLRYEALKGNAYDVLMSNSTWTLTRETALGVRFVTPYLFDGQGFLAHLKQGRTRLSAY 162 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 A+ICV TT+ L H + F +E + ++ + CD + D L + Sbjct: 163 DKANICVLDSTTSLTNLKALLAQHYPHFTLTSFVTLERMRESFFSGNCDMLSSDRLVLAS 222 Query: 204 LKLT-NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 +L + IL DIIS+ PL P + QGD +W++++ W ++ AE G+T+ N++ Sbjct: 223 EQLVRGGEQGAYHILEDIISREPLGPYVRQGDEQWFSLLRWLVQGLLLAEHKGVTRDNVD 282 Query: 263 QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKI 322 +++ T + ++Q LG+ N +ALG+ W R+IR +GN+ E++ RNLG ++L + Sbjct: 283 KLAGTTEDREIQHLLGV--VGNAHQALGVDAQWMRRVIRVVGNFEEIYQRNLGALAQLGV 340 Query: 323 PRGYNALWSKGGLMYAPPIR 342 RGYN LW KGGL Y PP + Sbjct: 341 RRGYNGLWYKGGLHYVPPFQ 360 >gi|87119292|ref|ZP_01075190.1| ABC glutamate/glutamine/aspartate/asparagine transporter, periplasmic substrate-binding protein [Marinomonas sp. MED121] gi|86165683|gb|EAQ66950.1| ABC glutamate/glutamine/aspartate/asparagine transporter, periplasmic substrate-binding protein [Marinomonas sp. MED121] Length = 344 Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 116/337 (34%), Positives = 180/337 (53%), Gaps = 13/337 (3%) Query: 10 LCLIILFFTSFSTNASI------LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 L L IL F++ S A I L + +RG L CG+ + + G W+GF VDF Sbjct: 11 LTLFILSFSTLSQAAQIIKPNSTLTQVIQRGDLNCGVFPDDPSRSAINLEGQWQGFYVDF 70 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 CRA ++A+ D + Y+ + A RF L + D++ ++ WT RE L F + Sbjct: 71 CRATAAAVLKDQEFVNYIEVGATTRFSTLVELKTDVVMYSSTWTHSREFQYQLDFPAVYL 130 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 FDGQGFI+ I +++ L ++CV T+T L D ++ +K I+F D Sbjct: 131 FDGQGFIVRAATNIQTINDLDNKTVCVTQNTSTHQNLVDLIESRELKTK-ILFSNG---D 186 Query: 184 AAYRAHRCDAYTGDISALYALKLT-NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + +R CDAYT D L + D+P + +LPD IS+ P+ P + D +W I+ Sbjct: 187 SFFRGGPCDAYTADRMNLATNRANRTDKPENYRLLPDTISREPIGPMVRNDDAQWSRIIR 246 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302 +A++ AEE I N++Q + N +VQ LG K IG+ LGL W YR I+ Sbjct: 247 AVVHALILAEEKNINAANVDQALTQSKNAEVQNLLG--KKGEIGQQLGLDNQWAYRAIKA 304 Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAP 339 +GNYGE+++R+ G+ S++ + RG N W++GG++YAP Sbjct: 305 VGNYGEVYNRHFGSHSKIGVKRGINQPWNQGGILYAP 341 >gi|209546999|ref|YP_002278917.1| family 3 extracellular solute-binding protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538243|gb|ACI58177.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 345 Score = 216 bits (550), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 113/318 (35%), Positives = 189/318 (59%), Gaps = 7/318 (2%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 S+L +K+RG L CG + GF + +G DVD CRA ++A+ DP K+ ++ + Sbjct: 27 SVLDSVKQRGVLNCGTDNTTPGFGYLNPKTSKMEGVDVDLCRATAAAVLGDPDKVNFVVV 86 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 K RF A+Q+ Q+DI+ +T R +L + F P +FDG G ++ G+ S++ L Sbjct: 87 TDKSRFNAVQTGQVDIVYAHTSVFASRAAALAVDFLPSYFFDGGGVMVTAASGVKSINDL 146 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIV-FERVEEIDAAYRAHRCDAYTGDISALY 202 SGA+IC G+ +E TLA KA N+ I+ F+ E++ +A + RC+ D SAL Sbjct: 147 SGATICTTQGSGSEATLAQEVKARNLTNTKILTFDTSEKLFSALTSGRCNGMYTDKSALA 206 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 A + + + +++VILP+ ++ +P A I+Q D EW +++WT YA+ AEE GIT N++ Sbjct: 207 AWRGNSQKSADYVILPETLAVAPFAGIIVQNDPEWRKLMTWTLYALFQAEEWGITSANLS 266 Query: 263 QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKI 322 ++ K + +P +Q+FLG++ G ++ + +I+ +GNYGE++DR+LG ++ L + Sbjct: 267 EMQK-SADPAIQKFLGVN--GGFGADFHVSDSFIADMIKGVGNYGEIYDRSLGPKTPLYL 323 Query: 323 PRG--YNALWSKGGLMYA 338 R NAL GGL+Y+ Sbjct: 324 ERDKTSNALSKNGGLLYS 341 >gi|329295742|ref|ZP_08253078.1| amino-acid ABC transporter-binding protein yhdW precursor [Plautia stali symbiont] Length = 216 Score = 215 bits (547), Expect = 9e-54, Method: Compositional matrix adjust. Identities = 94/218 (43%), Positives = 143/218 (65%), Gaps = 2/218 (0%) Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 +G F + Y+DG GF+ HKK + S +L GA++C+Q GT TEL +ADYFKA+ M+Y P Sbjct: 1 MGFLFAGVNYYDGIGFLTHKKASLKSAKELDGATVCIQVGTDTELNVADYFKANKMQYTP 60 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + F+R +E A + RCD + D S LYA ++ +P + ++L ++ISK PL P + +G Sbjct: 61 VTFDRSDESAKALDSGRCDTLSSDQSQLYAQRIKLGKPDDFIVLAEVISKEPLGPVVRRG 120 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTK 293 D +W+ IV W+ +AM+ AEE+GI+ K++++++ T PD+ LG + + G+ L L Sbjct: 121 DDDWFTIVKWSLFAMLNAEEMGISSKSVDEMAAKPTTPDMAHLLGAE--GDFGKDLKLDN 178 Query: 294 DWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWS 331 Y II+ +GNY E+FDRN+G S LKI RG NALW+ Sbjct: 179 KCAYNIIKQVGNYQEVFDRNVGKDSALKIARGQNALWN 216 >gi|148240911|ref|YP_001220412.1| general L-amino acid-binding periplasmic protein [Bradyrhizobium sp. BTAi1] gi|146411287|gb|ABQ39740.1| General L-amino acid-binding periplasmic protein [Bradyrhizobium sp. BTAi1] Length = 339 Score = 209 bits (532), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 112/318 (35%), Positives = 184/318 (57%), Gaps = 7/318 (2%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S++ IK+RG++ CG + G+ G + NG ++GFD D CR ++AI D KI+++PLN Sbjct: 25 SVVNKIKQRGYVSCGASQGVPGLSRPDENGYYRGFDSDMCRTFAAAILGDKDKIRFVPLN 84 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 A +RF ALQ+ +ID+LSR + TL R+ + + IT +D G ++ K I+ QL+ Sbjct: 85 AGQRFPALQTGEIDVLSRTSTITLSRDTVVRFVW--ITLYDTDGLLVRKADKITDPKQLA 142 Query: 145 GASICVQAGTT-TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 G ++C+Q G + TE ++ + + + + + F+ + A+ RCD Y D +A Sbjct: 143 GKTVCLQGGGSLTERSIEETEEEYGITMKKVYFDSTIQARDAFFGGRCDTYVTDGTAAAG 202 Query: 204 LKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 + + + P ++ I+ + P A+ +GD + ++I WT A++ AE GIT +NI+ Sbjct: 203 QRASVAKNPDDYDIIKVGHAAEPNGVAVARGDDQLFDITRWTINALLWAELHGITARNID 262 Query: 263 QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKI 322 + K + + +++R LG + G+ LGL W Y +++ MGNY E++D NLG S LKI Sbjct: 263 EKLK-SGSIEIKRVLG--QEPGFGKPLGLDDKWVYNVVKQMGNYAEIWDNNLGKSSPLKI 319 Query: 323 PRGYNALWSKGGLMYAPP 340 RG NALW GGL Y P Sbjct: 320 DRGLNALWKDGGLNYPYP 337 >gi|197104926|ref|YP_002130303.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Phenylobacterium zucineum HLK1] gi|196478346|gb|ACG77874.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Phenylobacterium zucineum HLK1] Length = 310 Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 108/314 (34%), Positives = 183/314 (58%), Gaps = 10/314 (3%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 +K R ++ CG + G+ G + G W+GFDVD CRA ++A+ D KI+++PLNA +R Sbjct: 1 MKGRDYVTCGASQGITGLSRPDERGVWRGFDVDVCRAFAAALLGDAQKIRFIPLNAAQRL 60 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 ALQ+ +ID+LSR T T R+++ + F +T FD I K+ G +S + L+G ++C Sbjct: 61 PALQTGEIDVLSRTTTMTFTRDMA--VRFVTVTQFDTDVLIFRKRLGAASPADLNGRTVC 118 Query: 150 VQA-GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD--ISALYALKL 206 +Q+ G++ + TL +++ + F+ AY + RCD Y D + A + Sbjct: 119 LQSGGSSADNTLTRVEAEAKIRFERVYFDSTITARDAYFSARCDVYVTDGFLGASQVATV 178 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 D P +H +L + P AI +GD W+++V WT ++ AE+ G+TQ N++++ + Sbjct: 179 ARD-PDDHALLY-LDHLLPQGVAIARGDDRWFDVVRWTVNLLIWAEQNGVTQANVDELRR 236 Query: 267 DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGY 326 + DV+R LG D + G A+GL DW Y++++ +GNYGE+++RNLG ++ +K R Sbjct: 237 -SGPADVRRVLGADPA--FGRAIGLEPDWGYQVLKQVGNYGEIWERNLGARTRIKADRRL 293 Query: 327 NALWSKGGLMYAPP 340 N + GGL++ P Sbjct: 294 NRPYKDGGLLFPYP 307 >gi|83593850|ref|YP_427602.1| extracellular solute-binding protein [Rhodospirillum rubrum ATCC 11170] gi|83576764|gb|ABC23315.1| extracellular solute-binding protein, family 3 [Rhodospirillum rubrum ATCC 11170] Length = 373 Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 111/323 (34%), Positives = 171/323 (52%), Gaps = 7/323 (2%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 N L I+ RG + CG N + GF ++G+W+GF +DFCRAL++A DP+ + +P Sbjct: 55 NGDTLTSIRDRGSVTCGTNP-IPGFGFPDSDGNWRGFFIDFCRALAAATLGDPTAFEVVP 113 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + + R+ AL S D+ + WTL R+ +LG F + +DGQ F+ SV Sbjct: 114 VESNSRWEALNSHTTDVNVDGSTWTLSRDTALGFDFPGVLIYDGQRFLAKPSVPEGSVKA 173 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD---IS 199 +G +C+ GTT E+ L D+ K ++++ I E E ++ RC+ + D ++ Sbjct: 174 AAGLRVCIIMGTTAEVNLRDFLKKNDLEMTVIATESDEGAWTSFLKGRCELFVNDGIGLA 233 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 AL +T P + ++ + ISK PL P + D +W I W ++ AEE GI+ Sbjct: 234 LRNALHMTP--PRVNHLMTEAISKEPLGPVVRGDDHQWLEINRWVLNVLIAAEEAGISST 291 Query: 260 NINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSE 319 + S R + + ALGL W R+I +GNYGE+FDRNLG SE Sbjct: 292 TLVDPSPTADLSSEDRVF-VGGPEDNAAALGLEPGWARRVIAAVGNYGEVFDRNLGKGSE 350 Query: 320 LKIPRGYNALWSKGGLMYAPPIR 342 + + RG NALWS+GGLM +PP++ Sbjct: 351 IGLDRGVNALWSEGGLMISPPLQ 373 >gi|56697219|ref|YP_167584.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Ruegeria pomeroyi DSS-3] gi|56678956|gb|AAV95622.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Ruegeria pomeroyi DSS-3] Length = 333 Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 104/315 (33%), Positives = 172/315 (54%), Gaps = 18/315 (5%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 I+ RG+L CG+ + +GFA ++ +G+W GFDVDFCRA+++A+ D + ++++PL++ R Sbjct: 31 IRDRGYLLCGVGSDDLGFATLRFDGEWTGFDVDFCRAVAAAMLGDATAVEFVPLDSLNRL 90 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 L ++D+L R T +T R+++ L F ITY+D Q +++ G ++S L+G ++C Sbjct: 91 EVLARGEVDVLFRTTTFTFDRDVNAALEFPAITYYDSQKVLVYADTGARTLSDLAGKTVC 150 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 +GTT+ + + + A+ C+A T D S L A+ + Sbjct: 151 ANSGTTSITNIRHRIDSLGGGIGIQEYASQAGRWRAFFGRECEAVTADGSDLAAMMAS-- 208 Query: 210 RPS---EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 RP + V+L D I+ PL P + + D +W IV W + AE GI Q Sbjct: 209 RPGYRDDFVLLEDEIANEPLGPVVREDDRQWEQIVRWVINLTLVAETAGIGQ-------- 260 Query: 267 DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGY 326 ++P+ L + ++ LG+ W +IR +GNY ++F RNLG+ SEL++ RG Sbjct: 261 -VSDPEEIARLALPAGAD----LGVVDTWGAEVIRQVGNYDDIFRRNLGDGSELRMERGR 315 Query: 327 NALWSKGGLMYAPPI 341 NALW+ GGLMY P+ Sbjct: 316 NALWTDGGLMYPLPM 330 >gi|67923106|ref|ZP_00516597.1| Hemolysin-type calcium-binding region:Bacterial extracellular solute-binding protein, family 3 [Crocosphaera watsonii WH 8501] gi|67855059|gb|EAM50327.1| Hemolysin-type calcium-binding region:Bacterial extracellular solute-binding protein, family 3 [Crocosphaera watsonii WH 8501] Length = 712 Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 113/324 (34%), Positives = 182/324 (56%), Gaps = 14/324 (4%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 +L +IK RG LK GIN GF+ NG + GFDVD +A++ A+F+D +KI+++ Sbjct: 212 LLQEIKDRGILKLGINGQKPGFSFPDENGSYIGFDVDLGKAIAVAVFNDSNKIEFVERED 271 Query: 86 KERFLA-LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 + +L + + +D+ + L+R+ G+ F + GQGF++ K GI +++ L+ Sbjct: 272 RVTWLTNVANGVVDVTAAQVTQNLVRDGKAGVDFISPYLYTGQGFLVRKDSGILNLATLN 331 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G + + +GTT E L D K + + P+ ++ ++E+ A Y DA D+ L L Sbjct: 332 GHEVGLFSGTTAEQNLQDAMKEYGGTFIPVYYDNLDEMLAGYAQGDIDAIINDLPLLGGL 391 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 T P EH++L D+ISK PL+ + + ++W + VSW Y ++ AEE GITQ NI+Q+ Sbjct: 392 IDTFSNPDEHLLLDDVISKEPLSMVVDENQSDWKDAVSWVQYGLLQAEEYGITQDNIDQI 451 Query: 265 SKDTT--NPD------VQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316 D T NPD + FLGI+ N GE LGL D+ +I+ +GNYGE+++R+ Sbjct: 452 LADNTDSNPDNDSDISTRIFLGIE--GNAGELLGLENDYMVNVIKAVGNYGEIYERHF-- 507 Query: 317 QSELKIPRGYNALWSKGGLMYAPP 340 S++ +PR +N L GL P Sbjct: 508 DSDI-LPRDFNQLSGDFGLQIPYP 530 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 70/196 (35%), Positives = 107/196 (54%), Gaps = 15/196 (7%) Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 G+T L ++ +++ P +E + A Y A DA + D S +Y T P Sbjct: 4 GSTALTNLEILLSSNGVEFEPRFYESTSAMFADYDAGNIDALSTDRSLIYGRLDTLSEPD 63 Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ---VSKDT- 268 H IL S P+A + + D++W N+V W A + AEELG+ NI Q V+KD Sbjct: 64 AHHILDVEFSSEPIAMVLPEDDSQWNNVVKWVINATIEAEELGLNSDNIEQILAVNKDEN 123 Query: 269 ----TNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324 ++P ++RFLGI+ S +GEALGL D+ Y I++ +GNY E++DR+ + + R Sbjct: 124 PNNDSDPAIRRFLGIE--SQLGEALGLPNDFAYNIVKLVGNYDEIYDRHFPD-----LER 176 Query: 325 GYNALWSKGGLMYAPP 340 N L+S GGL+Y+PP Sbjct: 177 DRNLLYSDGGLLYSPP 192 >gi|144897558|emb|CAM74422.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Magnetospirillum gryphiswaldense MSR-1] Length = 335 Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 117/320 (36%), Positives = 172/320 (53%), Gaps = 16/320 (5%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 +L + RG + CG++ GF G G +VD CRA+++AI +P IQ + Sbjct: 29 VLDRVLTRGKVVCGVDQ-TPGFGGFDDRGVPVGLEVDLCRAIAAAILKNPQAIQVQRVTT 87 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 K +F AL ++D+ T WT R+ ++ +F I ++DGQGF+ K + + Sbjct: 88 KYKFHALAEGELDVAFGMTTWTFDRDTTMMASFPAIAFYDGQGFM---KWADIADPWAAT 144 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 ++ICVQ+GTT+ LA+Y + EE +A+ RC A TGD + L K Sbjct: 145 STICVQSGTTSANNLAEYLSRRKSAAKVLALSSSEEKFSAFAERRCTAVTGDSTELAVQK 204 Query: 206 LTNDRPSEH---VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 N R + V+L IIS+ PL PAI D EW++IV W+ + AE G+ + N+ Sbjct: 205 --NRRSATQPSWVLLETIISREPLGPAIFNNDPEWFSIVRWSMLIPIIAEARGLGRYNLE 262 Query: 263 QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKI 322 V T+ +++R LG + G L L + W RII +GNYGE+F RNL + L I Sbjct: 263 SVP--ATDAELRRLLG--EEPGFGANLRLDQAWARRIIASVGNYGEIFARNL---APLGI 315 Query: 323 PRGYNALWSKGGLMYAPPIR 342 RG NALWS+GGL+YAPP+R Sbjct: 316 VRGQNALWSEGGLLYAPPLR 335 >gi|256376161|ref|YP_003099821.1| extracellular solute-binding protein family 3 [Actinosynnema mirum DSM 43827] gi|255920464|gb|ACU35975.1| extracellular solute-binding protein family 3 [Actinosynnema mirum DSM 43827] Length = 319 Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 100/325 (30%), Positives = 172/325 (52%), Gaps = 7/325 (2%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 T+ ++ + + I++RG L+ G++TG+ G + G +G DVD RA+++A+F +P Sbjct: 1 MTTSASLSPTVSAIRRRGHLRLGVSTGIRGLSWTDDAGVRRGLDVDTGRAVAAALFGEPG 60 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 +I+Y ++ ++R A+ S +D+L+ N WT RE +AF T +D ++ + G Sbjct: 61 RIEYTEIDPEDRIRAVTSDAVDLLACNATWTFSRECDANVAFVLTTCYDEGAILVRRDSG 120 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 I+S L G ++ + GT++E L +F H + AAY + Y Sbjct: 121 IASADDLDGHTLGMCEGTSSEEALRAWFGPRGRAVHCKHYASPAAALAAYASGEVTGYVA 180 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 D + + PS+HV+LP+ +S P+ P + D +W W +A++ AE G+ Sbjct: 181 DGVVVAGERTRLATPSDHVVLPERVSVEPMGPVVKDDDPQWVKTARWVFFALIAAEAAGV 240 Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316 T + + + +P + + S + GL W ++ +GNYGE+++RNLG+ Sbjct: 241 TSHQVRAGTAE--DPPL-----LKDQSRLAAKAGLHPRWISAVVGEVGNYGEIYERNLGD 293 Query: 317 QSELKIPRGYNALWSKGGLMYAPPI 341 S L+IPRGYN LW +GGLMYAPP+ Sbjct: 294 ASGLRIPRGYNELWLRGGLMYAPPL 318 >gi|254464335|ref|ZP_05077746.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Rhodobacterales bacterium Y4I] gi|206685243|gb|EDZ45725.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Rhodobacterales bacterium Y4I] Length = 333 Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 111/344 (32%), Positives = 181/344 (52%), Gaps = 25/344 (7%) Query: 6 FVSILCLIILFFTSFSTNASILGD----IKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 F+S L L + + A GD I+ RG+L CG+ + +GFA ++ +G+W GFDV Sbjct: 4 FLSALTLGLWLAGALGAEAG-EGDTGAAIRDRGYLLCGVGSDDLGFATLRYDGEWTGFDV 62 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 DFCRA+++A+ D + ++++PL++ R L ++D+L R T +T R+++ L F I Sbjct: 63 DFCRAVAAAMLGDATAVEFVPLDSLNRLEVLARGEVDVLFRTTTFTFDRDVNAALEFPAI 122 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 T++D Q +++ G +++ L+G ++C +GTT+ + + + Sbjct: 123 TFYDSQKVLVYADTGARTLADLAGKTVCANSGTTSITNIRHRIDSLGGGIGIQEYASQAG 182 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPS---EHVILPDIISKSPLAPAIIQGDTEWY 238 A+ C+A T D S L A+ + RP + V+L D I+ PL P + + D +W Sbjct: 183 RWRAFFGRECEAVTADGSDLAAMLAS--RPGYRDDFVLLEDEIANEPLGPVVREDDRQWE 240 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNP-DVQRFLGIDKSSNIGEALGLTKDWTY 297 IV W + AE GI Q T+ P ++ R G LG+ W Sbjct: 241 QIVRWVINLTLVAEAAGIGQ---------TSGPAEIARL-----PLPAGADLGVAGTWGA 286 Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341 +IR +GNY ++F RNLG+ SEL++ RG NALW+ GGLMY P+ Sbjct: 287 DVIRQVGNYDDIFSRNLGDGSELRMARGRNALWTDGGLMYPLPM 330 >gi|288962134|ref|YP_003452429.1| ABC transporter amino-acid binding protein [Azospirillum sp. B510] gi|288914400|dbj|BAI75885.1| ABC transporter amino-acid binding protein [Azospirillum sp. B510] Length = 352 Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 108/328 (32%), Positives = 172/328 (52%), Gaps = 10/328 (3%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 +++ + L I RGFL CG+ +G+ G + G GF VD CR ++A + I Sbjct: 31 AWAGDGDTLERIHGRGFLICGLRSGVSGISFSDPQGHLDGFLVDVCRVFAAATLGNAQAI 90 Query: 79 QYLPLNAK-ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KG 136 + + L K + F A++ ++D+ T WT R++S + F DGQGF +H Sbjct: 91 RVVRLPEKPQEFQAVEKHEVDVALTTTTWTFSRDLSNDIEFLMPLLHDGQGFAIHSDGTP 150 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 + +L ++CV+ TTT L D+ + ++ + F+ ++E A+ AH CD T Sbjct: 151 PPPLDRLGPRTVCVKTATTTVRNLEDHIRKSDLPWTMRTFQTLDEALQAFLAHECDLLTT 210 Query: 197 DISALYALKLTNDRPSEH--VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D + L L R + I PD+IS+ PL P I +GD WY++ W +A+V A+ Sbjct: 211 DRTVLVT-SLAGYRKAGMGIYIYPDVISREPLTPYIARGDRNWYDVTRWILHAIVLADAR 269 Query: 255 GITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNL 314 G+T ++ Q + +P++ R LG S N LGL DW + + +GNYGE+F+RNL Sbjct: 270 GVTSADV-QAGRVPDDPELHRMLG--HSGNAARMLGLPDDWALQALAQVGNYGEIFERNL 326 Query: 315 GNQSELKIPRGYNALWSKGGLMYAPPIR 342 G + RG N W++GGL+Y+PP R Sbjct: 327 GIPYGMD--RGPNKPWTQGGLLYSPPFR 352 >gi|119488696|ref|ZP_01621705.1| extracellular solute-binding protein, family 3 [Lyngbya sp. PCC 8106] gi|119455119|gb|EAW36260.1| extracellular solute-binding protein, family 3 [Lyngbya sp. PCC 8106] Length = 607 Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 104/324 (32%), Positives = 181/324 (55%), Gaps = 17/324 (5%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY-L 81 N ++L ++ RGF++ G+ G + NG+ GFDVD RAL++++F DP+ +++ + Sbjct: 293 NRNVLQEVLDRGFVRVGVRNDAQGLGFAEENGNLTGFDVDLGRALAASLFGDPNAVEFVI 352 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 +RF + + +D+ SRN L R+ LG+ F PI +D Q + GI+++ Sbjct: 353 QTTGSQRFSDVANGVVDVTSRNATHNLRRDALLGVDFAPINTYDAQFVVTPTASGITTLE 412 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD---- 197 QL+G I V AGTT+E L + A + + + + I +Y DA TGD Sbjct: 413 QLAGGRIGVSAGTTSETRLQEKLSAAGINAEVVALDNFQTIFDSYINGELDAITGDGGLI 472 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 IS+L L + ++ S+H P+++ + PLA + + ++W ++VS YA+ A ELG+T Sbjct: 473 ISSLLTLPV--EQRSQHQPFPEVLGEEPLAMVVDENQSQWKDVVSGVTYAVTEALELGLT 530 Query: 258 QKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNL-GN 316 +N+ +++NP ++RFLG++ N+GE+LGL D+ I +GNY EM +RN G Sbjct: 531 SENVT-AELESSNPVIRRFLGVE--GNVGESLGLPNDFALNAISAVGNYREMTERNFPGI 587 Query: 317 QSELKIPRGYNALWSKGGLMYAPP 340 + E +P +++GG +++ P Sbjct: 588 ELEGILP------YTEGGTLFSVP 605 Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 94/282 (33%), Positives = 158/282 (56%), Gaps = 9/282 (3%) Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D+ RAL++A+FD+P+ ++++ + A E F ++ S +DI + ++LR+ +LG+ F P Sbjct: 3 IDYSRALATALFDNPNSVEFVVVEAGEDFNSVASGTVDIAATLPTHSVLRDATLGVDFSP 62 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +FD QG ++ GI+SV QL ++ V AGT ++ L D + + + F + Sbjct: 63 TVFFDTQGVLVRGDSGINSVEQLQETTVGVLAGTRSQQNLEDAAQRAGITLNIQTFPSQD 122 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 ++ AAY A + + + L T P VIL + I K PLA + + ++E+ ++ Sbjct: 123 DLFAAYDAGEIGSVSINRGVLSNRIPTLSNPGNQVILEENIGKEPLAFIVPENESEFADV 182 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V W A + AE GI +N+N+ N D++RFLG+ S N+GE+LG+ D+ II Sbjct: 183 VRWVVNAPIQAEFFGINSQNVNEFLDG--NSDIKRFLGV--SGNLGESLGIDNDFALNII 238 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALW--SKGGLMYAPP 340 + +GNY E+++RN E +PR N L GGL+Y PP Sbjct: 239 QQVGNYEEIYNRNF---DETALPRNLNELMFVEPGGLVYYPP 277 >gi|7381255|gb|AAF61456.1|AF139661_1 putative amino acid ABC transporter binding protein [Azospirillum brasilense] Length = 236 Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 97/236 (41%), Positives = 138/236 (58%), Gaps = 4/236 (1%) Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKA 166 L R+ + G+ F + FDGQGFI H+ +GI+ +S L GAS+CV TTT L D+ Sbjct: 1 LQRDATFGIDFPAVYLFDGQGFIAHRAQGIARLSDLPPGASVCVIEQTTTLRNLEDWMAR 60 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE-HVILPDIISKSP 225 +++ E +A+ H CD YT D L+A +L E +VILP+ ISK P Sbjct: 61 TGLRFRLKPVRSTEGALSAFFNHHCDLYTSDRIGLHAQRLLKAPEREDYVILPEAISKEP 120 Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNI 285 L P + + W+++V W A V AEE GIT N ++ ++ +P+V+RFLG ++ + Sbjct: 121 LGPMVRPDERRWFDVVRWVFLATVLAEEKGITTANAARLKEEAQDPEVRRFLG--ATAGV 178 Query: 286 GEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341 G LGL W +R++ +GNYGE+FDR+LG S L I RG N LW GGL YAPP+ Sbjct: 179 GWGLGLDDGWAFRVVTQVGNYGEIFDRHLGAASPLGIDRGMNGLWMNGGLHYAPPL 234 >gi|300721866|ref|YP_003711144.1| putative Amino-acid binding protein [Xenorhabdus nematophila ATCC 19061] gi|297628361|emb|CBJ88926.1| putative Amino-acid binding protein [Xenorhabdus nematophila ATCC 19061] Length = 323 Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 105/320 (32%), Positives = 170/320 (53%), Gaps = 7/320 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 ++++ IK L G++ G G + N W+GFD+D +A++ A+ + KI ++P Sbjct: 4 SAVIQRIKTHNILNAGVSLGFRGLSFRDNYNSQWEGFDIDLAKAVAIAVLGNSKKINFIP 63 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 L + RF AL+ ID+ N+ T E ++F FDG+ + H+ I++VS+ Sbjct: 64 LQSGNRFQALKDNIIDLGCFNSSITFQSESEYNVSFAHPMLFDGEVLMTHENNLINNVSE 123 Query: 143 LSGA---SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 I G+TT+ L YF + + ++FE ++ AY+ C+ Y D Sbjct: 124 ARSTKKREIAAMRGSTTQENLERYFAELGLNCNIMLFESPQDAREAYQKGICNIYCLDSY 183 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L ++ + P +H+ L D IS ++PA+ D +W+ VSW A++ AE LGIT+ Sbjct: 184 LLAGERIQLEAPEKHLFLKDRISLEAMSPAVSLHDPQWHASVSWIMKALIEAENLGITRN 243 Query: 260 NINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSE 319 N+N +T + +FL S + LGL ++TY+IIR +GNYGE+F+RNLG S Sbjct: 244 NVNDKYNISTGY-INKFL--KPSEELCNNLGLQTEFTYKIIRELGNYGEIFERNLGKSSI 300 Query: 320 LKIPRGYNALWSKGGLMYAP 339 L R N WSKGG++Y+P Sbjct: 301 LNQERKDNKPWSKGGMLYSP 320 >gi|113478121|ref|YP_724182.1| Na-Ca exchanger/integrin-beta4 [Trichodesmium erythraeum IMS101] gi|110169169|gb|ABG53709.1| Na-Ca exchanger/integrin-beta4 [Trichodesmium erythraeum IMS101] Length = 3427 Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 116/324 (35%), Positives = 174/324 (53%), Gaps = 13/324 (4%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 +L IK+RG LK G+ GFA +NG+++GFDVD +A+++AIF DP K++ + Sbjct: 2868 LLAKIKERGVLKLGLPDNEPGFAVKMSNGEYEGFDVDLGKAIAAAIFGDPEKLEVKTQSF 2927 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 K+ F + +DI + L+R+ SLG+ F PI + GQG ++ GI+ + L+G Sbjct: 2928 KDSFANTANGVVDISAMGITHNLVRDASLGIDFGPIYLYTGQGVLVRNDSGITVLPALNG 2987 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 + V G T+ + D P F +E+ AAY DA D++ L Sbjct: 2988 RRVGVLEGATSLQNIQDTITELGGDIIPAEFTTNDEMFAAYDDGDIDAVITDMTILNGRV 3047 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 P EH IL DI+SK PL I + +EW ++V W A+V AEE IT KNI ++ Sbjct: 3048 QNLSNPKEHKILDDILSKEPLGLIIDENQSEWSDVVRWVTNALVQAEEYDITSKNIKRLM 3107 Query: 266 KDTTNPD--------VQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQ 317 + + D V++FLGI+ NIG+ LGL D+ +I+ +GNYGE+++R Sbjct: 3108 ANNLDDDPNNDSDPVVRQFLGIE--GNIGKVLGLPNDFVPNVIKAVGNYGEIYERYF--D 3163 Query: 318 SELKIPRGYNALWSKGGLMYAPPI 341 S L +PR N L+S GL YA P+ Sbjct: 3164 SNL-LPREQNELFSNFGLQYALPL 3186 Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 106/324 (32%), Positives = 168/324 (51%), Gaps = 27/324 (8%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 +IL DI KRG +K I+ G FD++F +++A+F D SK++ + Sbjct: 2546 TILDDIIKRGQIKVAIS------------GSGNEFDLEFAEVIAAAVFGDASKVKSITSK 2593 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 + F + + D+ ++ TL R+ L + F P FD Q I+ I++VS L+ Sbjct: 2594 FSKSFELVADGKADLAAQRITATLGRDGELNVDFAPTYLFDYQTVIVPNDSDITNVSHLN 2653 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 +I V GTT + L + + +K+ P +FE EE+ AAY A DAY+ D S + Sbjct: 2654 EQTIGVIEGTTALINLQNQLEVEGIKFTPKLFETAEEMIAAYDAGEVDAYSHDRSLILEN 2713 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 +P H +L +SK P++ A+ + D++W ++V W Y + AEE GI+ +NI + Sbjct: 2714 LDQLSQPENHRLLDVELSKEPISLALPENDSQWADVVRWAGYVPIQAEEFGISSQNIAEF 2773 Query: 265 ----SKDTTNPD----VQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316 + D D ++RFLGI+ N+GE LGL D+ II +GNY E++DR+ Sbjct: 2774 IALNTDDNPTNDSSLGIRRFLGIE--GNLGETLGLPNDFAVNIINQVGNYSEIYDRHFSG 2831 Query: 317 QSELKIPRGYNALWSKGGLMYAPP 340 I N+LWS GG +Y+PP Sbjct: 2832 -----IEGDRNSLWSDGGFLYSPP 2850 >gi|327395693|dbj|BAK13115.1| general L-amino acid-binding periplasmic protein AapJ precursor [Pantoea ananatis AJ13355] Length = 323 Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 110/321 (34%), Positives = 166/321 (51%), Gaps = 11/321 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 +++ I++ L G++ G G ++ N W GFD+D RA++ ++ D KI ++PL Sbjct: 5 AVIKRIEQHDVLNVGVSLGFKGLSQRDPLNNSWNGFDIDLARAVAISVLGDGGKIHFIPL 64 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ- 142 + +RF AL+ ID+ + N T RE G+ F FDG+ + + Q Sbjct: 65 QSADRFQALRDGVIDLGTFNASVTFQREAEYGINFLHPMLFDGEVLMTPRSNLTEETPQA 124 Query: 143 --LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 I G+TTE L YF N+ ++F+ ++ AY + CD Y D Sbjct: 125 RFTRQRRIAAMRGSTTEENLTRYFDELNLPCEILLFDSPQQARQAYESGECDIYCLDGYL 184 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L S+H+IL D IS +APA+ D++WY W A++ AE LGITQKN Sbjct: 185 LAGEHHQLTDSSQHLILDDRISLEAMAPAVSASDSQWYIATKWVMRALIEAENLGITQKN 244 Query: 261 INQVSKDTTNPD--VQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318 I + S NP+ ++ FL D N+ LGL D+ IIR +GNYGE+F+RNLG S Sbjct: 245 ILEKSD---NPEGYLKTFLYPD--VNLCSQLGLQPDFIREIIRKIGNYGEIFERNLGKNS 299 Query: 319 ELKIPRGYNALWSKGGLMYAP 339 ELK R N W++GG++++P Sbjct: 300 ELKQQRRDNKPWAEGGMLWSP 320 >gi|282899859|ref|ZP_06307820.1| hypothetical protein CRC_01252 [Cylindrospermopsis raciborskii CS-505] gi|281195129|gb|EFA70065.1| hypothetical protein CRC_01252 [Cylindrospermopsis raciborskii CS-505] Length = 9381 Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 106/329 (32%), Positives = 171/329 (51%), Gaps = 17/329 (5%) Query: 25 SILGDIKKRGFLKCGI----NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 ++L +I+ RGF+K G+ +G GFAE+ + G +KGFDVD +A+++A+F DPSK++Y Sbjct: 8644 NLLAEIQNRGFIKYGLPQITGSGFPGFAEIDSQGQYKGFDVDLSKAIAAAVFGDPSKVEY 8703 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 F + +D+ + L+R+ LG+ + P+ GQG + K GI+ + Sbjct: 8704 TQQAFANSFANTANGLVDVSAAGYTGNLMRDAGLGVDYSPVYIHTGQGILTRKDSGITGI 8763 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + L+G++I T L+D K F+ ++ AAY DA D + Sbjct: 8764 ATLNGSTIGALTTVTAIENLSDLTKKFGSTIIITPFDDKNKMYAAYEKGEIDAVYNDKTL 8823 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L + T P H ILP+ SK PL + + ++W ++V W ++V AEE GIT N Sbjct: 8824 LAGIIPTLSDPQAHEILPETFSKEPLTLILDENQSDWADVVRWVMNSLVQAEEYGITSTN 8883 Query: 261 INQV-----SKDTTN---PDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDR 312 I+ + D N ++Q FLG+ N G +LGL+ D+ ++I+ +GNYGE++ R Sbjct: 8884 IDDIIAKNRDNDPNNNSIKEIQAFLGL--QGNPGASLGLSSDFVVKMIKAVGNYGEIYAR 8941 Query: 313 NLGNQSELKIPRGYNALWSKGGLMYAPPI 341 N +PR N L+ GL YA P+ Sbjct: 8942 NFDTN---ILPREKNDLYHFSGLQYALPL 8967 Score = 152 bits (385), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 96/329 (29%), Positives = 172/329 (52%), Gaps = 29/329 (8%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 ++L +I++RG+++ F+ +++ FD F RA+++AIF D +++ +P Sbjct: 8315 NLLAEIQQRGYIR---------FSGGRSDSISGVFDYQFVRAIAAAIFGDANRVDQVPGT 8365 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 E F + +KQ+D+ +R+ L+R+ L + F P+ Y+D ++ K GI L+ Sbjct: 8366 FSESFSQVANKQVDLSTRHITQNLVRDGELNVDFGPVYYYDFLSVLVRNKSGIQGAKDLN 8425 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY-A 203 G I V TT L + + +++ VF+ ++ AAY DA D +Y A Sbjct: 8426 GKKIGVVKNTTALTNLDNLLDSIGVQFTAEVFDTQNDLYAAYNLGEVDAIASDKGIIYDA 8485 Query: 204 LK---LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L+ L N + EH L SK P+ I + ++EW ++V W Y + AEE GI +N Sbjct: 8486 LEREILENKQ--EHRFLDIQFSKEPIGLVIPENESEWGDVVRWVVYTTIQAEEYGINSQN 8543 Query: 261 INQV--------SKDTTNPDVQRFLGIDK-SSNIGEALGLTKDWTYRIIRHMGNYGEMFD 311 I+++ SK+ ++P ++RFLG++ ++G AL L +D+ ++I+ +GNYGE++ Sbjct: 8544 IDRLLADNTDDNSKNDSDPAIRRFLGLEGLEGSLGSALELPQDFVVQVIKQVGNYGEIYQ 8603 Query: 312 RNLGNQSELKIPRGYNALWSKGGLMYAPP 340 R+ + R N L GGL+ + P Sbjct: 8604 RSFP-----SLTRDLNLLSLTGGLLESLP 8627 >gi|256395455|ref|YP_003117019.1| extracellular solute-binding protein family 3 [Catenulispora acidiphila DSM 44928] gi|256361681|gb|ACU75178.1| extracellular solute-binding protein family 3 [Catenulispora acidiphila DSM 44928] Length = 321 Score = 182 bits (462), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 100/315 (31%), Positives = 161/315 (51%), Gaps = 19/315 (6%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L + G ++ ++ G+ G + A G W+G D D RA+++A D + +L Sbjct: 25 LAAARATGTVRAVVSRGIRGLSSPDAAGVWRGLDTDMARAVAAAAIGDGEAVSWLSTEPA 84 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 R L + + D++ N WTL RE + G+ F +T +DG+GF++ GI+ +QL+G Sbjct: 85 ARLDRLVAGEADLVVSNLTWTLGRETA-GVLFAGVTCYDGEGFLVRASDGITDPAQLAGR 143 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 + QAGTT+ LA +F + + PI + + A Y + C AY D AL + Sbjct: 144 QVATQAGTTSAANLAAWFGSRGLAVTPIAYPTPADALAGYASGDCAAYVLDCVALAGERA 203 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 D P EH IL IS+ P+A A+ D EW+ + W ++ AE ++ + ++ Sbjct: 204 ALDDPGEHRILDTTISREPMAMAVRDDDAEWFRLCRWVLQFLIAAEH----AEDPAEAAR 259 Query: 267 DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGY 326 D + G ALGL ++W R++ +G YG+++ RNLG S L +PRG Sbjct: 260 D--------------AGRHGPALGLDENWAARVLDAVGTYGDVYARNLGPASGLDVPRGL 305 Query: 327 NALWSKGGLMYAPPI 341 NALW++GGL Y P+ Sbjct: 306 NALWTEGGLHYPMPL 320 >gi|291619370|ref|YP_003522112.1| AapJ [Pantoea ananatis LMG 20103] gi|291154400|gb|ADD78984.1| AapJ [Pantoea ananatis LMG 20103] Length = 323 Score = 182 bits (462), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 108/321 (33%), Positives = 164/321 (51%), Gaps = 11/321 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 +++ I++ L G++ G G ++ N W GFD+D RA++ ++ D KI ++PL Sbjct: 5 AVIKRIEQHDVLNVGVSLGFKGLSQRDPLNNSWNGFDIDLARAVAISVLGDGGKIHFIPL 64 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ- 142 + +RF AL+ ID+ + N T RE G+ F FDG+ + + Q Sbjct: 65 QSADRFQALRDGVIDLGTFNASVTFQREAEYGINFLHPMLFDGEVLMTPRSNLTEETPQA 124 Query: 143 --LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 I G+TTE L YF N+ ++F+ ++ AY + CD Y D Sbjct: 125 RFTRQRRIAAMRGSTTEENLTRYFDELNLPCEILLFDSPQQARQAYESGECDIYCLDGYL 184 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L S+H+IL D IS +APA+ D++WY W A++ AE LGITQK Sbjct: 185 LAGEHHQLTDSSQHLILDDRISLEAMAPAVSASDSQWYIATKWVMRALIEAENLGITQKT 244 Query: 261 INQVSKDTTNPD--VQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318 + S NP+ ++ FL D N+ LGL D+ IIR +GNYGE+F+RNLG S Sbjct: 245 FLEKSD---NPEGYLKTFLYPD--VNLCSQLGLQPDFIREIIRKIGNYGEIFERNLGKNS 299 Query: 319 ELKIPRGYNALWSKGGLMYAP 339 ELK R N W++GG++++P Sbjct: 300 ELKQQRRDNKPWAEGGMLWSP 320 >gi|260223278|emb|CBA33680.1| General L-amino acid-binding periplasmic protein aapJ [Curvibacter putative symbiont of Hydra magnipapillata] Length = 173 Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 85/175 (48%), Positives = 118/175 (67%), Gaps = 3/175 (1%) Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK-LTNDRPSEHVILPDIISKSPLA 227 M PIVFE++E + AY + RC AYT D S L + + P++HVILP++ISK PL Sbjct: 1 MNIKPIVFEKLEAAEGAYFSGRCVAYTTDASGLASTRNKVAKNPADHVILPELISKEPLG 60 Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGE 287 P + +GD EW IV WT Y ++ AEE G+TQ N++ + +T +P V R LG + + G+ Sbjct: 61 PMVRRGDDEWTAIVKWTVYGLLEAEENGVTQANVDDLKANTKDPVVGRLLGT--TEDTGK 118 Query: 288 ALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 LGL K+W R I+ GNYGE+F+RN+G +S L++PRG N LWSKGG+ YAPP+R Sbjct: 119 LLGLDKEWLARAIKTTGNYGEIFERNVGPKSPLQLPRGLNNLWSKGGVQYAPPVR 173 >gi|262165601|ref|ZP_06033338.1| amino acid ABC transporter amino acid-binding protein [Vibrio mimicus VM223] gi|262025317|gb|EEY43985.1| amino acid ABC transporter amino acid-binding protein [Vibrio mimicus VM223] Length = 166 Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 82/169 (48%), Positives = 115/169 (68%), Gaps = 3/169 (1%) Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 +VF+ + + A RCD T D S LYAL+L ++P ++LP+IISK PL P + Q Sbjct: 1 MVFDTAAQTSKGFDAGRCDVLTTDQSGLYALRLNLEKPDSALVLPEIISKEPLGPVVRQD 60 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTK 293 D +W+N+ W YAMV AEE GIT KN++++ K + NP+V+R LG+D G LG+ Sbjct: 61 DDKWFNVAKWVLYAMVNAEEYGITSKNVDEMMK-SDNPEVKRILGLDGPK--GTGLGIRD 117 Query: 294 DWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 DW+Y+I++ +GNYGE F+R +G+ S L+I RG NALW+ GG MYAPPIR Sbjct: 118 DWSYQIVKQVGNYGESFERTVGSGSPLQIDRGVNALWNAGGFMYAPPIR 166 >gi|71735465|ref|YP_276122.1| amino-acid binding protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71556018|gb|AAZ35229.1| amino-acid binding protein, putative [Pseudomonas syringae pv. phaseolicola 1448A] Length = 317 Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 108/318 (33%), Positives = 175/318 (55%), Gaps = 6/318 (1%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 +AS+ DIKKRG+L+ G++ GL+G + + G+W GFDVD RA+S AIF D I+Y P Sbjct: 2 DASVF-DIKKRGYLRVGVSLGLIGLSSKNSEGEWSGFDVDLARAVSVAIFGDDQCIEYFP 60 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 L + +RF ALQ ID+ N+ T RE + F FDG+ +M K G S Sbjct: 61 LASNDRFDALQQNIIDLGCFNSSITFSRETISEVKFCHPMLFDGE-MLMTKSAGGMSRPI 119 Query: 143 LSGA-SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 +SG + G+TT L YF+ N+K +++ ++ AY C+ Y D L Sbjct: 120 VSGEIRVAALEGSTTGDNLNRYFREQNLKGVVHLYKTFDDARNAYNLDVCNYYCLDGYLL 179 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 + +HVIL +IS+ ++PA + T+ + V+W +++ +E +GI N+ Sbjct: 180 SGEQTKLRDSRDHVILEQMISREAMSPATLSSKTQLTSAVTWVLRSIIESENIGINSHNL 239 Query: 262 NQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELK 321 N + N ++++L D I LG++ +T +++++GNY E+F+R+LG++S L+ Sbjct: 240 NAF-YELENWYIRKYLHPDP--RISSKLGISPSFTADVVKNVGNYEEIFERHLGSKSILR 296 Query: 322 IPRGYNALWSKGGLMYAP 339 R N L S GGL+Y+P Sbjct: 297 QTRRENRLRSVGGLLYSP 314 >gi|193083904|gb|ACF09583.1| amino acid ABC transporter periplasmic amino acid-binding protein [uncultured marine group II euryarchaeote KM3-72-G3] Length = 470 Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 117/363 (32%), Positives = 178/363 (49%), Gaps = 46/363 (12%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDP-SKI 78 +T S L I RG +KCG+ G + A G G D+ +CRA+++A+ +P + + Sbjct: 113 ATPVSTLDTIVDRGSMKCGVKESQYGMGYLDAGTGVRSGLDISYCRAVAAALGLNPDTDV 172 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--- 135 +Y+P + +RF L S ID+L R T WT R+ L F + +FDGQG ++ Sbjct: 173 EYIPASGSDRFDKLASGTIDVLIRTTTWTTSRDADLNADFAGMNFFDGQGILVRSDAYEY 232 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 G S QL+ A ICV GTTTE + D+F + N+++ + E A + CDA+T Sbjct: 233 GTGSADQLNNAEICVGIGTTTEGNMVDWFSSRNIQFTSVPVADAAEATAKFIDGSCDAFT 292 Query: 196 GDISALYALKLTNDRPSEHV----------ILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 GD+SA+ A K D + V I +++SK PL A D+++ ++V+W Sbjct: 293 GDMSAMVAKKWQLDGDASMVDDNGDPVSIWIAQELMSKEPLGAATRDMDSDFKDVVAWVW 352 Query: 246 YAMVTAEELGIT----------QKNINQVSKDTTNPDVQRFLGIDKSSNIGEALG---LT 292 Y MVTAEE+G+T +N+ T++P + R L + N+G L Sbjct: 353 YGMVTAEEMGVTAANAADSAATACALNEGGA-TSDPGMCRLL----TENLGLGTATNPLA 407 Query: 293 KDWTYRIIRHMGNYGEMFDRNLGN-----------QSELKIPRG--YNALWSKGGLMYAP 339 DW ++ GNYGE +D + S I R NAL S+GG+ YAP Sbjct: 408 GDWMQAVLATAGNYGEAYDDAFCDGTYDGVSGSDAMSGCLISRSGTLNALVSEGGIQYAP 467 Query: 340 PIR 342 +R Sbjct: 468 AMR 470 >gi|320106917|ref|YP_004182507.1| family 3 extracellular solute-binding protein [Terriglobus saanensis SP1PR4] gi|319925438|gb|ADV82513.1| extracellular solute-binding protein family 3 [Terriglobus saanensis SP1PR4] Length = 336 Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 106/339 (31%), Positives = 179/339 (52%), Gaps = 9/339 (2%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 VS+L L + + + L ++ G L CG+ + +G GFD+D C+A Sbjct: 4 VSLLLLAVCSSLTLGAQQT-LQKVRAAGVLTCGVIAEDAEYNTEDDHGSRGGFDLDLCKA 62 Query: 67 LSSAIFDDPSKIQYLP-LNAKERFLALQSKQIDILSR-NTDWTLLREISLGLAFRPITYF 124 ++ A + ++ + + L+ K AL + +ID+++ + D++ SLG + P+ Y Sbjct: 63 VAVAALGEKAQTKVITFLDDKSGVDALIAGKIDLIATLSADFSHTTNASLGES-APVLY- 120 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 DG GF++ +K GI+ + L+ +C A T E L +F ++ P F+ E++A Sbjct: 121 DGVGFLVLRKSGIAHAADLTHRKVCFLAETNVETALQAWFTRQHLDLLPFPFQEEGEMEA 180 Query: 185 AYRAHRCDAYTGDISALYALKLT-NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 AY C A GD++ L + + + +H+ILP++I+ PLA A D +W IV W Sbjct: 181 AYITKNCAAIAGDLTRLAQTRASFETQAPDHMILPEVIAADPLAFAYRSSDPQWGRIVDW 240 Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHM 303 T + E LG+T NI+ +S + +P V+ LG + +G LGL++DW ++R + Sbjct: 241 TAQVLFHGEALGVTSANID-ISAKSADPAVRHLLG--ATHAVGTPLGLSEDWAASVLRSV 297 Query: 304 GNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNY E+FDR G S L + RG N L S+GGL+ P++ Sbjct: 298 GNYREVFDRTFGEASTLSLTRGRNRLTSEGGLILPLPLK 336 >gi|161170240|gb|ABX59211.1| substrate-binding protein [uncultured marine group II euryarchaeote EF100_57A08] Length = 439 Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 121/349 (34%), Positives = 183/349 (52%), Gaps = 40/349 (11%) Query: 30 IKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDP-SKIQYLPLNAKE 87 I +RG LKCG+ G + A G G D+ +CRAL++AI DP + I+++P ++++ Sbjct: 95 ILERGMLKCGVKESQYGMGYLDSATGVRSGLDISYCRALAAAIGLDPMTDIEFVPASSQD 154 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK---KGIS-SVSQL 143 RF L S +ID+L R T WT R+ L F + +FDGQG ++ + +G++ + + L Sbjct: 155 RFEKLASGEIDVLIRTTTWTTSRDADLNADFAGMNFFDGQGILIREDTYPQGLTQTATML 214 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 + A +CV GTTTE LAD+ ++++ I E A ++ CDA+TGD+SA+ A Sbjct: 215 TSAKVCVGTGTTTEGNLADFDTSNSVGMDIIGVVDAAEGTAKLQSGECDAFTGDMSAMVA 274 Query: 204 LK--LTND--------RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 K L ND P I P+I+SK PL A D +W ++V+W Y MVTAEE Sbjct: 275 KKWALDNDGTVVDDNGDPVGLWIAPEILSKEPLGAATRDNDDDWNDVVAWVWYGMVTAEE 334 Query: 254 LGITQKNINQVSKDTT----NPDVQRFLGIDKSSNIG---EALGLTKDWTYRIIRHMGNY 306 GIT N ++ D NP R + ++N+G +A L W ++ +GNY Sbjct: 335 YGITSANYMTMASDAAAEGGNPGHNRLM----NTNLGLGTDANPLADTWMQAVMGAVGNY 390 Query: 307 GEMFDRNLGNQSE-------------LKIPRGYNALWSKGGLMYAPPIR 342 GE +D + + L NAL S+GGL +APP+R Sbjct: 391 GEAYDDAFCDGTYDGSSGSDTMTGCLLDRAGTANALVSEGGLQFAPPMR 439 >gi|193083731|gb|ACF09418.1| amino acid ABC transporter periplasmic amino acid-binding protein [uncultured marine group II euryarchaeote SAT1000-15-B12] Length = 374 Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 115/334 (34%), Positives = 173/334 (51%), Gaps = 25/334 (7%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L I RG +KCG+ G + +G + G D+++C+AL++AI D I+Y+ Sbjct: 50 STLDTIIARGSMKCGVKDSQFGMGFLNDDGTYSGLDIEYCKALAAAIGVD--SIEYILAT 107 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK----GISSV 140 RF L S +ID+L R T WT R+ L F + ++DGQG +++ G +S Sbjct: 108 GSNRFELLASHEIDVLIRTTTWTTSRDAGLNADFAGMNFYDGQGMLVNTGPDHFPGATSA 167 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L GA+ICV GTTTE L DY++ + M+ I E + C +TGD+SA Sbjct: 168 LDLDGANICVGIGTTTEGNLLDYYELNQMQMTTINTENAAAAQENFLDGSCGVWTGDMSA 227 Query: 201 LYA-LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 + A + D I+P+++SK PL A D +W ++V+W Y M+TAEE GI Sbjct: 228 MVARMYGLRDEGMSLAIMPELLSKEPLGAATRDNDDDWNDVVAWVWYGMITAEEFGIDGS 287 Query: 260 NINQVSKDTTNPDVQRFLGIDKSSNIGEALG-----LTKDWTYRIIRHMGNYGEMFDRNL 314 N ++ NP + R L +SN+G LG L+ W ++ +GNY + +DR+ Sbjct: 288 NYMDF-VNSENPGINRLL----NSNLG--LGTDDNPLSDTWMQSVLGAVGNYHDAYDRSF 340 Query: 315 ----GNQSELKIPRG--YNALWSKGGLMYAPPIR 342 G + I R NAL S+GG+ YAPP+R Sbjct: 341 CDGDGGMNNCLISRAGTLNALVSEGGIQYAPPMR 374 >gi|320327184|gb|EFW83198.1| amino-acid binding protein, putative [Pseudomonas syringae pv. glycinea str. race 4] Length = 317 Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 107/318 (33%), Positives = 175/318 (55%), Gaps = 6/318 (1%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 +AS+ DIKKRG+L+ G++ GL+G + + G+W GFDVD RA+S AIF D I+Y P Sbjct: 2 DASVF-DIKKRGYLRVGVSLGLIGLSSKNSEGEWSGFDVDLARAVSVAIFGDDQCIEYFP 60 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 L + +RF ALQ ID+ N+ T RE + F FDG+ +M K G S Sbjct: 61 LASNDRFDALQQNIIDLGCFNSSITFSRETISEVKFCHPMLFDGE-MLMTKSAGGMSRPI 119 Query: 143 LSGA-SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 +SG + G+TT L YF+ ++K +++ ++ AY C+ Y D L Sbjct: 120 VSGEIRVAALEGSTTGDNLNRYFREQHLKGVVHLYKTFDDARNAYNLDVCNYYCLDGYLL 179 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 + +HVIL +IS+ ++PA + T+ + V+W +++ +E +GI N+ Sbjct: 180 SGEQTKLRDSRDHVILEQMISREAMSPATLSSKTQLTSAVTWVLRSIIESENIGINSHNL 239 Query: 262 NQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELK 321 N + N ++++L D I LG++ +T +++++GNY E+F+R+LG++S L+ Sbjct: 240 NAF-YELENWYIRKYLHPDP--RISSKLGISPSFTADVVKNVGNYEEIFERHLGSKSILR 296 Query: 322 IPRGYNALWSKGGLMYAP 339 R N L S GGL+Y+P Sbjct: 297 QTRRENRLRSVGGLLYSP 314 >gi|320325529|gb|EFW81591.1| amino-acid binding protein, putative [Pseudomonas syringae pv. glycinea str. B076] Length = 346 Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 107/318 (33%), Positives = 174/318 (54%), Gaps = 6/318 (1%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 +AS+ DIKKRG+L+ G++ GL+G + + G+W GFDVD RA+S AIF D I+Y P Sbjct: 31 DASVF-DIKKRGYLRVGVSLGLIGLSSKNSEGEWSGFDVDLARAVSVAIFGDDQCIEYFP 89 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 L + +RF ALQ ID+ N+ T RE + F FDG+ +M K G S Sbjct: 90 LASNDRFDALQQNIIDLGCFNSSITFSRETISEVKFCHPMLFDGE-MLMTKSAGGMSRPI 148 Query: 143 LSGA-SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 +SG + G+TT L YF+ N+K +++ ++ AY C+ Y D L Sbjct: 149 VSGEIRVAALEGSTTGDNLNRYFREQNLKGVVHLYKTFDDARNAYNLDVCNYYCLDGYLL 208 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 + +HVIL +IS+ ++PA + + + V+W +++ +E +GI N+ Sbjct: 209 SGEQTKLRDSRDHVILEQMISREAMSPATLSSKIQLTSAVTWVLRSIIESENIGINSHNL 268 Query: 262 NQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELK 321 N + N ++++L D I LG++ +T +++++GNY E+F+R+LG++S L+ Sbjct: 269 NAF-YELENWYIRKYLHPDP--RISSKLGISPSFTADVVKNVGNYEEIFERHLGSKSILR 325 Query: 322 IPRGYNALWSKGGLMYAP 339 R N L S GGL+Y+P Sbjct: 326 QTRRENRLRSVGGLLYSP 343 >gi|297192982|ref|ZP_06910380.1| ABC transporter amino acid-binding protein [Streptomyces pristinaespiralis ATCC 25486] gi|197723387|gb|EDY67295.1| ABC transporter amino acid-binding protein [Streptomyces pristinaespiralis ATCC 25486] Length = 352 Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 100/317 (31%), Positives = 162/317 (51%), Gaps = 19/317 (5%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 + L K RG ++ ++ G+ G + G W G D D RA+++A +D I ++P+ Sbjct: 54 ATLRSAKVRGAVRVAVSQGVRGLSLRTPAGRWTGLDTDIARAVAAAALEDAEAIDWVPVR 113 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 A +R L+S + D+ N WT+ RE + + F IT +DG+GF++ G++ + L+ Sbjct: 114 ATDRLRTLESGRADLTVCNLTWTMGREATGAVLFAGITCYDGEGFLVRAADGLADPADLA 173 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G + V G TT + L ++ ++ P+ F+ + AAY C AY D +AL Sbjct: 174 GRRLAVHNGCTTVVNLESWYGPLGLEVEPVGFDDPADALAAYACGDCAAYVLDRTALAGA 233 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 + RP +H ILP IS+ P+A A+ + D W+ +V W +V AE G Sbjct: 234 RACLPRPQDHRILPVSISREPMAAAVHEADPHWFRLVRWVLQLLVAAEHEG--------- 284 Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324 P+ L + G + GL + W R++ +G YG++++RNLG S L +PR Sbjct: 285 ------PEAAARL----AGPHGPSAGLDEKWADRVLSAVGTYGDVYERNLGAASGLDVPR 334 Query: 325 GYNALWSKGGLMYAPPI 341 G N LW+ GGL YA P+ Sbjct: 335 GVNELWTAGGLHYAVPL 351 >gi|193084366|gb|ACF10022.1| amino acid ABC transporter periplasmic amino acid-binding protein [uncultured marine group II euryarchaeote AD1000-18-D2] Length = 394 Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 117/353 (33%), Positives = 178/353 (50%), Gaps = 35/353 (9%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDP-SKI 78 +T S L I RG +KCG+ G + A G G D+ +CRA+++A+ +P + + Sbjct: 46 ATPVSTLDTIIDRGSMKCGVKESQYGMGYLDAGTGVRSGLDISYCRAVAAALGLNPDTDV 105 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--- 135 +Y+P + +RF L S ID+L R T WT R+ L F + +FDGQG ++ + Sbjct: 106 EYIPASGSDRFDKLASGTIDVLIRTTTWTTSRDADLNADFAGMNFFDGQGILVREDAYSA 165 Query: 136 --GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 +S L GA+ICV GTTTE + D+F + N+ + + E A + CDA Sbjct: 166 AGAGNSAGGLDGANICVGIGTTTEGNMVDWFSSRNIAFTSVPVADAAEATAKFIDGSCDA 225 Query: 194 YTGDISALYALK--LTNDRPSEHV---ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 +TGD+SA+ A K L D V I +++SK PL A D+++ ++V+W Y M Sbjct: 226 FTGDMSAMVAKKWQLDGDGSMNGVDIWIAQELMSKEPLGAATRDMDSDFKDVVAWVWYGM 285 Query: 249 VTAEELGITQKNINQVSK---DTTNPDVQRFLGIDKSSNIG---EALGLTKDWTYRIIRH 302 VTAEE+G+T N + D ++P + R L + N+G A L DW ++ Sbjct: 286 VTAEEMGVTAANAADSAAAACDGSDPGMCRLL----TENLGLGTAANPLAGDWMQAVLAT 341 Query: 303 MGNYGEMFDRNLGN-----------QSELKIPRG--YNALWSKGGLMYAPPIR 342 GNYGE +D + + I R NAL S+GG+ YAP +R Sbjct: 342 AGNYGEAYDDAFCDGTYDGVSGSDAMTGCLISRSGTLNALVSEGGIQYAPAMR 394 >gi|193084292|gb|ACF09951.1| amino acid ABC transporter periplasmic amino acid-binding protein [uncultured marine group II euryarchaeote KM3-130-D10] Length = 394 Score = 176 bits (445), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 117/353 (33%), Positives = 178/353 (50%), Gaps = 35/353 (9%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDP-SKI 78 +T S L I RG +KCG+ G + A G G D+ +CRA+++A+ +P + + Sbjct: 46 ATPVSTLDTIIDRGSMKCGVKESQYGMGYLDAGTGVRSGLDISYCRAVAAALGLNPDTDV 105 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK---- 134 +Y+P + +RF L S ID+L R T WT R+ L F + +FDGQG ++ + Sbjct: 106 EYIPASGSDRFDKLASGTIDVLIRTTTWTTSRDADLNADFAGMNFFDGQGILVREDVFPA 165 Query: 135 -KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 +S L GA+ICV GTTTE + D+F + N+ + + E A + CDA Sbjct: 166 AAAGNSAGGLDGANICVGIGTTTEGNMVDWFSSRNIAFTSVPVADAAEATAKFIDGSCDA 225 Query: 194 YTGDISALYALK--LTNDRPSEHV---ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 +TGD+SA+ A K L D V I +++SK PL A D+++ ++V+W Y M Sbjct: 226 FTGDMSAMVAKKWQLDGDDSMGGVDIWIASELMSKEPLGAATRDMDSDFKDVVAWVWYGM 285 Query: 249 VTAEELGITQKNINQVSK---DTTNPDVQRFLGIDKSSNIG---EALGLTKDWTYRIIRH 302 VTAEE+G+T N + D ++P + R L + N+G A L DW ++ Sbjct: 286 VTAEEMGVTAANAAASAAAACDGSDPGMCRLL----TENLGLGTAANPLAGDWMQAVLAT 341 Query: 303 MGNYGEMFDRNLGN-----------QSELKIPR--GYNALWSKGGLMYAPPIR 342 GNYGE +D + + I R NAL S+GG+ YAP +R Sbjct: 342 AGNYGEAYDDAFCDGTYDGVSGSAAMTGCLISRVGTLNALVSEGGIQYAPAMR 394 >gi|170516837|gb|ACB15239.1| hypothetical protein [uncultured marine group II euryarchaeote DeepAnt-15E7] Length = 393 Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 113/362 (31%), Positives = 180/362 (49%), Gaps = 46/362 (12%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDP-SKI 78 +T S L I RG +KCG+ G + A G G D+ +CR +++A+ +P + + Sbjct: 38 ATPVSTLDTIIARGSMKCGVKESQYGMGYLDAGTGVRSGLDISYCRGVAAALGLNPDTDV 97 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK----- 133 +Y+P + +RF L S ID+L R T WT R+ L F + +FDGQG ++ + Sbjct: 98 EYIPASGSDRFDKLASGTIDVLIRTTTWTTSRDADLNADFAGMNFFDGQGILVREDAFGA 157 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 + +S S L+GA+ICV GTTTE + D+F + + + + E A + CDA Sbjct: 158 EASGNSASALNGANICVGIGTTTEGNMVDWFSSRGIAFTSVPVADAAEATAKFIDGSCDA 217 Query: 194 YTGDISALYALK--------LTNDRPSEHV---ILPDIISKSPLAPAIIQGDTEWYNIVS 242 +TGD+SA+ A K + D + + I +++SK PL A D+++ ++V+ Sbjct: 218 FTGDMSAMVAKKWQLDGDASMGVDENGDAIGIWIASELMSKEPLGAATRDMDSDFKDVVA 277 Query: 243 WTHYAMVTAEELGITQKNINQVSK----DTTNPDVQRFLGIDKSSNIGEALG-----LTK 293 W Y MVTAEE+G+T N + D ++P + R L + N+G LG L Sbjct: 278 WVWYGMVTAEEMGVTAANAAASATAACADGSDPGMCRLL----TENLG--LGTATNPLAG 331 Query: 294 DWTYRIIRHMGNYGEMFDRNLGNQSELKIPRG-------------YNALWSKGGLMYAPP 340 DW ++ GNYGE +D + + + NAL S+GG+ YAP Sbjct: 332 DWMQAVLATAGNYGEAYDDAFCDGTYDGVSGSAAMTGCLISRVGTLNALVSEGGIQYAPA 391 Query: 341 IR 342 +R Sbjct: 392 MR 393 >gi|288962967|ref|YP_003453261.1| general L-amino acid transport system substrate-binding protein [Azospirillum sp. B510] gi|288915233|dbj|BAI76717.1| general L-amino acid transport system substrate-binding protein [Azospirillum sp. B510] Length = 353 Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 101/327 (30%), Positives = 166/327 (50%), Gaps = 12/327 (3%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 ++ +T+ +L +I++RG ++CG++ GFA G GF VD CRAL++A+ Sbjct: 31 SARATDRPVLAEIERRGVVRCGVSFN-PGFAANDDGGRPVGFMVDLCRALAAAVLGKADA 89 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 I+ L+ + F A+ + ++D+ T WTL R+++ + F P ++D QG + Sbjct: 90 IEIRRLSKPQEFDAVAAGEVDVSFAQTSWTLTRDVTHAVDFGPPVFYDVQGIAAWRLPDG 149 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 S ++C+ AGTTT+ + + F + A+ + C A D Sbjct: 150 GSALDGGELTVCMPAGTTTQAEMESLIAGGKRPWKLRSFPGWPDALEAFLSRDCAALGAD 209 Query: 198 ----ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 +AL+ L L D S + + S+ PLAP D W V WT +A+ A++ Sbjct: 210 RAQLTTALHMLGLPPD--SLEITDAPLASREPLAPMTPNSDRNWMAAVRWTMFALFLADD 267 Query: 254 LGITQKNINQVSKDTTNPDVQRFL-GIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDR 312 G++ N N + T +++R L GI + + GL DW Y+ + +GNYGE+FDR Sbjct: 268 AGVSGANAN-FQRITGGSEMRRLLSGIPE---VAAKAGLRPDWAYQAVVQVGNYGEIFDR 323 Query: 313 NLGNQSELKIPRGYNALWSKGGLMYAP 339 NLG +S K+ RG N W++GGL+YAP Sbjct: 324 NLGARSPFKLERGLNRPWTQGGLLYAP 350 >gi|159904020|ref|YP_001551364.1| hypothetical protein P9211_14791 [Prochlorococcus marinus str. MIT 9211] gi|159889196|gb|ABX09410.1| Hypothetical protein P9211_14791 [Prochlorococcus marinus str. MIT 9211] Length = 215 Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 88/215 (40%), Positives = 131/215 (60%), Gaps = 6/215 (2%) Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 ++ K ISS+ L ICV +GTTTE + D F+A ++ Y PI ++ + ++ A Y Sbjct: 1 MVKKNSSISSIDDLVNQPICVGSGTTTEQNINDAFEARSIPYTPIKYQDLNQVVAGYLQG 60 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 RC A T D S L A + P EH+IL DI+SK PLAPA + D + + + W Y+++ Sbjct: 61 RCAAMTSDRSQLAAARSGFSNPKEHIILKDILSKEPLAPASLGADQKLGDAMRWVIYSLI 120 Query: 250 TAEELGITQKNINQVSKDT-TNPDVQ---RFLGIDKSSNIGEALGLTKDWTYRIIRHMGN 305 +AEE GIT+ NIN+ K NP ++ RFLG++ ++GE +GL + +IR GN Sbjct: 121 SAEEKGITKVNINEKLKTAKANPQLKPLRRFLGVE--GDLGEKIGLDNSFVVNVIRATGN 178 Query: 306 YGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPP 340 YGE+++R+LG S + IPRG N L+ KGG+ +PP Sbjct: 179 YGEIYNRHLGPNSNVPIPRGLNELYIKGGVQISPP 213 >gi|47079429|gb|AAT10172.1| periplasmic substrate binding protein [uncultured marine group II euryarchaeote DeepAnt-JyKC7] Length = 373 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 106/311 (34%), Positives = 164/311 (52%), Gaps = 26/311 (8%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDP-SKI 78 +T S L I RG +KCG+ G + A G G D+ +CR +++A+ +P + I Sbjct: 46 ATPVSTLDTIIARGSMKCGVKESQYGMGYLDAGTGVRSGLDISYCRGVAAALGLNPDTDI 105 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK---- 134 +Y+P + +RF L S ID+L R T WT R+ L F + +FDGQG ++ + Sbjct: 106 EYIPASGSDRFDKLASGTIDVLIRTTTWTTSRDADLNADFAGMNFFDGQGILVREDVFPA 165 Query: 135 -KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 +S + L+GA+ICV GTTTE + D+F + N+ + + E A + CDA Sbjct: 166 ADAGNSAAGLNGANICVGIGTTTEGNMVDWFSSRNIAFTSVPVADAAEATAKFIDGSCDA 225 Query: 194 YTGDISALYALK--LTNDRPSEHV---ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 +TGD+SA+ A K L D V I +++SK PL A D+++ ++V+W Y M Sbjct: 226 FTGDMSAMVAKKWQLDGDDSMGGVGIWIAQELMSKEPLGAATRDMDSDFKDVVAWVWYGM 285 Query: 249 VTAEELGITQKNINQVSK---DTTNPDVQRFLGIDKSSNIGEALGLTKD-----WTYRII 300 VTAEE G+T N ++ D ++P V R L + N+G LG T + W ++ Sbjct: 286 VTAEENGVTAANAADMAAAACDGSDPGVCRLL----TENLG--LGTTDNPLAGTWMQAVL 339 Query: 301 RHMGNYGEMFD 311 + GNYGE +D Sbjct: 340 QAAGNYGEAYD 350 >gi|261883825|ref|ZP_06007864.1| Solute-binding protein/glutamate receptor [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 173 Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 70/155 (45%), Positives = 99/155 (63%) Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 RA+S+A+F DP K+ ++PL+ KERF ALQS +D+LS T WTL R+ +G+ F Y+ Sbjct: 1 RAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSCQTTWTLSRDAGMGIHFVGTAYY 60 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 DGQGF++ K G+ S +L GASIC + GTTTE +ADY AHN+KY P+V + + + Sbjct: 61 DGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYCGAHNIKYEPVVIDSADGLLK 120 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219 A+ R D YT D ALYA +L P + + + Sbjct: 121 AFETGRGDVYTTDALALYAQRLILAEPDAYGVFSE 155 >gi|153869943|ref|ZP_01999447.1| Lysine-arginine-ornithine-binding periplasmic protein [Beggiatoa sp. PS] gi|152073594|gb|EDN70556.1| Lysine-arginine-ornithine-binding periplasmic protein [Beggiatoa sp. PS] Length = 224 Score = 133 bits (334), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 77/206 (37%), Positives = 116/206 (56%), Gaps = 5/206 (2%) Query: 30 IKKRGFLKCGINT---GLVG-FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 I+KR L CG+ + GL G F + G GFDVDFCRA+++AI ++P+ + + + Sbjct: 4 IEKRTVLVCGVGSDVNGLKGGFTFINEKGQVAGFDVDFCRAVAAAILNNPNALSPVLVRQ 63 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 +R L +D+L+ T WT RE + G F IT++DGQGFI+ K I+++ QL G Sbjct: 64 SDRPGTLAPGNVDLLTATTTWTSTREANWG-NFTWITFYDGQGFIVKKDTSITTLEQLEG 122 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 +ICV GTTT L + F ++ + + F E AAY +C AYT D S L + Sbjct: 123 KNICVVEGTTTLANLKEVFAQRSISFTLLTFPEATEEFAAYEQEQCTAYTSDRSTLASWI 182 Query: 206 LTNDRPSEHVILPDIISKSPLAPAII 231 +++ P HV + + ISK+PL P + Sbjct: 183 FSSNTPDAHVFIDETISKNPLRPQCL 208 >gi|218507985|ref|ZP_03505863.1| polar amino acid ABC transport substrate-binding protein, aapJ-2 [Rhizobium etli Brasil 5] Length = 189 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 65/170 (38%), Positives = 96/170 (56%), Gaps = 1/170 (0%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 L IK+RG +K G+ T GF + G W+GF VDF RAL+ +F+D K+++ Sbjct: 21 GQTLDKIKERGVIKVGVGT-TPGFFTPDSTGRWQGFFVDFGRALAVTVFNDDDKVEFTNS 79 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 + ++R ALQ+ + DIL T+ R LG F P+ ++DGQG ++ K G++ +L Sbjct: 80 SPQQRLPALQAGEFDILLSGVTETITRAFKLGFHFGPVVFYDGQGLLVRKDLGVAKGEEL 139 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 GA+I VQ+GTT EL +AD+F+ K+ PI E E A R DA Sbjct: 140 DGATIGVQSGTTGELNIADFFRKTGKKFTPITIEETSEFTKALDTGRVDA 189 >gi|322435380|ref|YP_004217592.1| hypothetical protein AciX9_1764 [Acidobacterium sp. MP5ACTX9] gi|321163107|gb|ADW68812.1| hypothetical protein AciX9_1764 [Acidobacterium sp. MP5ACTX9] Length = 311 Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 86/304 (28%), Positives = 139/304 (45%), Gaps = 13/304 (4%) Query: 12 LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI 71 LIIL S A + I+ L+C I+ + +G FD++ C A++ AI Sbjct: 6 LIILATLSLPACAQSIETIRTTKLLRCAIDQEPPEYTTEDLHGPRVAFDLELCHAVALAI 65 Query: 72 FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131 D L + E L+++ D L+ L + GL DG GF++ Sbjct: 66 GPDIKVQPILVSDEAEAISVLKARHAD-LAPTLSLNLTNATTPGLWLGLPIVLDGTGFMV 124 Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191 V LSG IC A T TE L +F +++ + P F E+DAAY C Sbjct: 125 --PTATLDVKSLSGKKICFFAETETETILKTWFTQNHLDFLPYPFSEEGEMDAAYTTGNC 182 Query: 192 DAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 A GD++ L + + R + + +LP +I+ +PLAPA D + +WT+ ++ Sbjct: 183 AAMAGDLTRLASTRQNYGRAAARYKLLPTLIASAPLAPA--STDPTLTQLATWTNQLLLN 240 Query: 251 AEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMF 310 AE L NI + + + +P +QR LG ++ +G L L W R++ +GNY +++ Sbjct: 241 AEAL-----NITHIPEHSQDPAIQRLLG--QTHELGPRLHLDDAWPIRVLTTLGNYADLY 293 Query: 311 DRNL 314 R L Sbjct: 294 ARTL 297 >gi|331007193|ref|ZP_08330404.1| amino acid ABC transporter, periplasmic amino acid-binding protein [gamma proteobacterium IMCC1989] gi|330418988|gb|EGG93443.1| amino acid ABC transporter, periplasmic amino acid-binding protein [gamma proteobacterium IMCC1989] Length = 120 Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 58/127 (45%), Positives = 84/127 (66%), Gaps = 11/127 (8%) Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT----NPDVQR 275 +ISK PL P + QGD W+N+V W+ AM+ AE L N++ S DT +P+ +R Sbjct: 1 MISKEPLGPVVRQGDDAWFNVVRWSLMAMIEAEFL-----NVDSASADTAKASGSPEQKR 55 Query: 276 FLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGL 335 LG + + GE LGL++DW + I++ +GNY E F+RN+G+ S LKI RG NA W+KGG+ Sbjct: 56 LLGAEGGA--GEKLGLSEDWAFNIVKQVGNYSESFERNVGSGSALKIARGLNAQWNKGGI 113 Query: 336 MYAPPIR 342 +Y+ PIR Sbjct: 114 LYSSPIR 120 >gi|330901940|gb|EGH33281.1| extracellular solute-binding protein [Pseudomonas syringae pv. japonica str. M301072PT] Length = 132 Score = 122 bits (305), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 57/130 (43%), Positives = 81/130 (62%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L + + L IKK+GF++CG++ GL GF+ + G G D Sbjct: 3 MLKSTLAVVTALAAFGVIGAANAGTTLDAIKKKGFIQCGVSDGLPGFSVPDSTGKITGID 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D CRA+++A+F D +K+++ LNAKERF ALQS +IDILSRNT WT R+ +GL F Sbjct: 63 ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDAGMGLVFTG 122 Query: 121 ITYFDGQGFI 130 +TY+DG GF+ Sbjct: 123 VTYYDGIGFL 132 >gi|224367658|ref|YP_002601821.1| AapJ1 [Desulfobacterium autotrophicum HRM2] gi|223690374|gb|ACN13657.1| AapJ1 [Desulfobacterium autotrophicum HRM2] Length = 119 Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 51/113 (45%), Positives = 73/113 (64%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 FV +L + LF T+ A L D+K +GF++ G+N L GF + G W+G DVD R Sbjct: 6 FVGVLLMAALFLTAGMATADTLEDVKAKGFIQAGVNGDLFGFGKPDEKGVWRGLDVDTAR 65 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 A+++A+F D +K+++ PL AK RF ALQS +ID+L+RN TL R+ LGL F Sbjct: 66 AVAAAVFGDANKVKFTPLTAKTRFTALQSGEIDVLTRNCTQTLTRDTDLGLDF 118 >gi|153869942|ref|ZP_01999446.1| Lysine-arginine-ornithine-binding periplasmic protein [Beggiatoa sp. PS] gi|152073593|gb|EDN70555.1| Lysine-arginine-ornithine-binding periplasmic protein [Beggiatoa sp. PS] Length = 110 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 49/110 (44%), Positives = 73/110 (66%), Gaps = 3/110 (2%) Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLT 292 GD +W I+ + ++ AEELGITQ N++ + + NP V+R LG++ S E +GL Sbjct: 4 GDEQWVKIIRTILFGLINAEELGITQANVDTM-MSSDNPQVRRLLGVEGSFGQAE-IGLE 61 Query: 293 KDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 D R +R +GNYGE+++RNLG+ + +PRG N LW+ GGL+YAPP+R Sbjct: 62 PDAIARAVRAVGNYGEIYERNLGSGG-IGMPRGLNRLWTDGGLIYAPPLR 110 >gi|146281563|ref|YP_001171716.1| hypothetical protein PST_1179 [Pseudomonas stutzeri A1501] gi|145569768|gb|ABP78874.1| conserved hypothetical protein [Pseudomonas stutzeri A1501] Length = 197 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 43/79 (54%), Positives = 64/79 (81%) Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D CRA+++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ ++GL F Sbjct: 1 MDVCRAVAAAVFGDATKVKYSPLTAKERFTALQSGEVDVLSRNTTWTSSRDAAMGLNFTG 60 Query: 121 ITYFDGQGFIMHKKKGISS 139 +TY+DGQGF+++K+ G+SS Sbjct: 61 VTYYDGQGFLVNKELGVSS 79 >gi|323165232|gb|EFZ51022.1| general L-amino acid-binding periplasmic aapJ domain protein [Shigella sonnei 53G] Length = 93 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 43/95 (45%), Positives = 64/95 (67%), Gaps = 2/95 (2%) Query: 248 MVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYG 307 M+ AEE+GI +N+++ + + PD+ LG K + G+ L L W Y II+ +GNY Sbjct: 1 MLNAEEMGINSQNVDEKAANPATPDMAHLLG--KEGDYGKDLKLDNKWAYNIIKQVGNYS 58 Query: 308 EMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 59 EIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 93 >gi|218458308|ref|ZP_03498399.1| general L-amino acid ABC transporter, substrate-binding protein [Rhizobium etli Kim 5] Length = 62 Score = 91.3 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 37/60 (61%), Positives = 49/60 (81%) Query: 283 SNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + IG LGLT +W Y I++++GNYGE+F+RN+G S+LKI RG NALWSKGG+ YAPP+R Sbjct: 3 TKIGTDLGLTNEWAYNIVKNVGNYGEVFERNIGQGSQLKIDRGLNALWSKGGIQYAPPVR 62 >gi|150017371|ref|YP_001309625.1| extracellular solute-binding protein [Clostridium beijerinckii NCIMB 8052] gi|149903836|gb|ABR34669.1| extracellular solute-binding protein, family 3 [Clostridium beijerinckii NCIMB 8052] Length = 290 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 69/228 (30%), Positives = 107/228 (46%), Gaps = 19/228 (8%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 S ++S L DIKKRG +K G+ + F V + G +GFDV + + + D SK+ Sbjct: 35 SNKASSSSLEDIKKRGTIKIGVFSDKAPFGYVDSEGKNQGFDVYVAKRFAKDLLGDESKV 94 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 +++ ++A R L+SK++DI+ N +T+ E + F G + I+ Sbjct: 95 EFVLVDAASRVSYLESKKVDIIMAN--FTVTDERKEKVDFANPYMKVSLGVVSPDGAKIT 152 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV----FERVEEIDAAYRAHRCDAY 194 S QL G + V GTT E + K HP V +E+ EI A + R DA Sbjct: 153 SEDQLKGKKVIVAKGTTAETYMT--------KNHPDVELVKYEQYSEIFQALKDKRGDAI 204 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE---WYN 239 D + + A D P V +P + S +APA+ +G+TE W N Sbjct: 205 LSDNTEVIA--WAKDNPGFSVGIPSLGSTDTIAPAVTKGNTELRDWIN 250 >gi|193084269|gb|ACF09931.1| periplasmic substrate binding protein [uncultured marine group III euryarchaeote KM3-28-E8] Length = 270 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 47/126 (37%), Positives = 70/126 (55%), Gaps = 5/126 (3%) Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-----KK 135 +P ++++RF L S +ID+L R T WT R+ L F + ++DGQG ++ + Sbjct: 1 MPASSQDRFEKLASGEIDVLIRTTTWTTSRDAELNADFAGMNFYDGQGILIREDAFPAAN 60 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 +SVS L GA+ICV GTTTE L DYF +H + + E + CDA+T Sbjct: 61 ANNSVSGLDGATICVGTGTTTEGNLQDYFTSHGIAFTAEPVGDAAEATQKFIDGACDAFT 120 Query: 196 GDISAL 201 GD+SA+ Sbjct: 121 GDMSAM 126 >gi|159904021|ref|YP_001551365.1| hypothetical protein P9211_14801 [Prochlorococcus marinus str. MIT 9211] gi|159889197|gb|ABX09411.1| Hypothetical protein P9211_14801 [Prochlorococcus marinus str. MIT 9211] Length = 109 Score = 87.4 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 43/98 (43%), Positives = 67/98 (68%), Gaps = 1/98 (1%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 T+ + S LG IK+R L CGI+ + GF+ ++++G+++G D+D C+A ++A D Sbjct: 10 TTNENDVSRLGLIKERNELICGISGKIPGFSFLESDGNYQGIDIDICKAFAAAFTGDSDN 69 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +QY PL A ERF A+++ +ID+LSRNT TL R+ SLG Sbjct: 70 VQYRPLTAAERFTAVRTGEIDLLSRNTTLTLSRD-SLG 106 >gi|219670584|ref|YP_002461019.1| extracellular solute-binding protein family 3 [Desulfitobacterium hafniense DCB-2] gi|219540844|gb|ACL22583.1| extracellular solute-binding protein family 3 [Desulfitobacterium hafniense DCB-2] Length = 297 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 8/218 (3%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 ++A L +IK+RG L+ G+ + F V ANG +GFDV+ R + + D SK++++ Sbjct: 45 SSAGSLEEIKQRGTLRIGVFSDKPPFGYVDANGQNQGFDVEIARRFAKDLLGDESKVEFV 104 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 + A R L+S ++DI+ N +T+ E + F G + I+S+ Sbjct: 105 LVEAANRVPYLESNKVDIIMAN--FTVTEERKQKVDFANPYMKVALGIVSPNGALITSID 162 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 QL G + V GTT + DY ++ + +++ E A + R A D + + Sbjct: 163 QLQGQKVIVNKGTTAQ----DYLTKNHPDLELLKYDQNTEAFEALKDGRGAALAHDNTEV 218 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 A +N P V +P + S +APA+ +GDTE N Sbjct: 219 LAWAKSN--PGFTVGVPTLGSTDTIAPAVKKGDTELLN 254 >gi|225019520|ref|ZP_03708712.1| hypothetical protein CLOSTMETH_03473 [Clostridium methylpentosum DSM 5476] gi|224947741|gb|EEG28950.1| hypothetical protein CLOSTMETH_03473 [Clostridium methylpentosum DSM 5476] Length = 282 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 66/238 (27%), Positives = 115/238 (48%), Gaps = 12/238 (5%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L IK+RG ++ G+ + F + +NG+ +G+DV + L+ + D SK++++ + A Sbjct: 35 LESIKERGTIRIGVFSDKPPFGYIDSNGENQGYDVYLAKRLAKDLLGDESKVEFVLVEAA 94 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 R LQS ++D+L N +T+ +E + + F G ++ K GI+SV QL G Sbjct: 95 SRVEYLQSNKVDLLLAN--FTVTKERAEQVDFANPYMKVALGIVL-KDGGITSVDQLKGK 151 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 ++ V GTT E YF + + + F++ E A + R DA D + L+A Sbjct: 152 TLAVNKGTTAET----YFTENYPDINLLKFDQNTETFQALKDGRADALAHDNTLLFAWAN 207 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 ND V + + S +APA+ +G+ E + SW + + E KN + Sbjct: 208 END--GFEVGVSSLGSHDTIAPAVKKGNDE---LRSWVNDELAKLGEEKFMHKNYQET 260 >gi|320547237|ref|ZP_08041530.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus equinus ATCC 9812] gi|320448125|gb|EFW88875.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus equinus ATCC 9812] Length = 279 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 56/191 (29%), Positives = 96/191 (50%), Gaps = 10/191 (5%) Query: 16 FFTSFSTNASILGD----IKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSA 70 FFT+ T A + I+ G LK G+ + F A +G ++G ++D + ++ Sbjct: 29 FFTASKTFADTTSEQIKKIQDAGVLKVGVKQDVPNFGYYSAESGKYEGMEIDLAKKIAKT 88 Query: 71 IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130 + K+ Y + + R L + QID+L +T+ E A Y+D GF+ Sbjct: 89 L---GVKVAYTAVTTQTREALLDNGQIDLLIAT--YTITDERKASYAISNPYYYDEIGFL 143 Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190 ++ KG+ ++S L G +I V G+TT+LT+ +Y KAHN+K+ + E+ + A R Sbjct: 144 VNTGKGLKTISDLDGKTIGVAQGSTTKLTIEEYGKAHNLKFKFVQLGSFPELAISLHAKR 203 Query: 191 CDAYTGDISAL 201 DA++ D S L Sbjct: 204 IDAFSVDKSIL 214 >gi|121610312|ref|YP_998119.1| extracellular solute-binding protein [Verminephrobacter eiseniae EF01-2] gi|121554952|gb|ABM59101.1| extracellular solute-binding protein, family 3 [Verminephrobacter eiseniae EF01-2] Length = 278 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 58/194 (29%), Positives = 95/194 (48%), Gaps = 7/194 (3%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 V++L L+ + FTS + +A L D+ KRG+L G F G+ +GFDVD R Sbjct: 10 LVAVLTLLGMCFTSLA-HADKLADVLKRGYLIVGTTGSSPPFGFKDEKGELQGFDVDMSR 68 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ A+F DP K++++ L + R+ ALQ+ Q+D++++ T R + +G R YFD Sbjct: 69 LIAKALFGDPQKVKFVLLGNEARWTALQTDQVDMVAQFATITPERLVRVGFTPR---YFD 125 Query: 126 -GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 G ++ K I S + L A + + T E D K F V++ Sbjct: 126 TGMTVVVRKDSKIKSFADLDSADVTIATLTVPEQI--DLVKRMAPNARVASFATVDQQFL 183 Query: 185 AYRAHRCDAYTGDI 198 A R+ R A+ D+ Sbjct: 184 ALRSGRVQAFLVDL 197 >gi|89897433|ref|YP_520920.1| hypothetical protein DSY4687 [Desulfitobacterium hafniense Y51] gi|89336881|dbj|BAE86476.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 276 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 8/213 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L +IK+RG L+ G+ + F V ANG +GFDV+ R + + D SK++++ + A Sbjct: 29 LEEIKQRGTLRIGVFSDKPPFGYVDANGQNQGFDVEIARRFAKDLLGDESKVEFVLVEAA 88 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 R L+S ++DI+ N +T+ E + F G + I+S+ QL G Sbjct: 89 NRVPYLESNKVDIIMAN--FTVTEERKQKVDFANPYMKVALGIVSPDGALITSIDQLQGK 146 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 + V GTT + DY ++ + +++ E A + R A D + + A Sbjct: 147 KVIVNKGTTAQ----DYLTKNHPDLELLKYDQNTEAFEALKDGRGAALAHDNTEVLAWAK 202 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +N P V +P + S +APA+ +GDTE N Sbjct: 203 SN--PGFTVGVPALGSTDTIAPAVKKGDTELLN 233 >gi|77408339|ref|ZP_00785080.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus agalactiae COH1] gi|77173020|gb|EAO76148.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus agalactiae COH1] Length = 266 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 55/198 (27%), Positives = 98/198 (49%), Gaps = 7/198 (3%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDF 63 + +S + + +LF+ + ST+A+ L +IKK G LK G+ + F A + ++G ++D Sbjct: 10 YLLSXIFIFLLFYPN-STSANQLSEIKKSGVLKVGVKQDVPNFGYYNAETNQYEGMEIDI 68 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 + ++ ++ P ++P A+ R + + QIDIL +T+ E Y Sbjct: 69 AKKIAKSLGVKPV---FVPTTAQTREPLMDNGQIDILI--ATYTITPERKANYNISKAYY 123 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 D GF++ K I ++ +L G I V G TT++ L Y K H +K+ E+ Sbjct: 124 HDEIGFLVRKNSHIKTIKELDGKHIGVAQGATTKVNLEKYAKEHKLKFSYAQLGSFPELA 183 Query: 184 AAYRAHRCDAYTGDISAL 201 + A+R DA++ D S L Sbjct: 184 ISLYANRIDAFSVDKSIL 201 >gi|222823699|ref|YP_002575273.1| amino acid ABC transporter, periplasmic solute-binding lipoprotein [Campylobacter lari RM2100] gi|222538921|gb|ACM64022.1| amino acid ABC transporter, periplasmic solute-binding lipoprotein [Campylobacter lari RM2100] Length = 275 Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 65/245 (26%), Positives = 118/245 (48%), Gaps = 13/245 (5%) Query: 1 MYKDFFVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K F +S L + LFF + S +N + + IK++G ++ G+ F + A G + Sbjct: 1 MKKIFLLSFL--MALFFGACSNSGSNENSIEKIKQQGVIRIGVFGDKPPFGYLDAQGKNQ 58 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G+DV F + ++ + D SKIQ++ + A R LQS ++D++ N T RE+ + A Sbjct: 59 GYDVYFAKRIAKELLGDESKIQFVLVEAANRVEFLQSNKVDLILANFTKTPEREVVVDFA 118 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + G + K I ++ L ++ + GTT + YF + + I F+ Sbjct: 119 LPYMKV--ALGVVAPKNSDIKTIDDLKSKTLILNKGTTADA----YFTKNMPEIKTIKFD 172 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + E AA R DA + D + L+A N P+ V++ ++ + +APA+ +GD Sbjct: 173 QNTETFAALIGKRGDALSHDNALLFAWAKEN--PNFEVVIKELGNHDVIAPAVKKGDEAM 230 Query: 238 YNIVS 242 ++ Sbjct: 231 LKFIN 235 >gi|22536881|ref|NP_687732.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus agalactiae 2603V/R] gi|76788013|ref|YP_329465.1| polar amino acid ABC transporter amino acid-binding protein [Streptococcus agalactiae A909] gi|76798186|ref|ZP_00780437.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus agalactiae 18RS21] gi|22533731|gb|AAM99604.1|AE014224_7 amino acid ABC transporter, amino acid-binding protein [Streptococcus agalactiae 2603V/R] gi|76563070|gb|ABA45654.1| polar amino acid uptake (PAAT) family ABC transporter, amino acid-binding protein [Streptococcus agalactiae A909] gi|76586449|gb|EAO62956.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus agalactiae 18RS21] Length = 266 Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 56/198 (28%), Positives = 94/198 (47%), Gaps = 6/198 (3%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDF 63 F++ I L F ST+A+ L +IKK G LK G+ + F A + ++G ++D Sbjct: 9 FYLLSCIFIFLLFYPNSTSANQLSEIKKSGVLKVGVKQDVPNFGYYNAETNQYEGMEIDI 68 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 + ++ ++ P ++P A+ R + + QIDIL +T+ E Y Sbjct: 69 AKKIAKSLGVKPV---FVPTTAQTREPLMDNGQIDILI--ATYTITPERKANYNISKAYY 123 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 D GF++ K I ++ +L G I V G TT++ L Y K H +K+ E+ Sbjct: 124 HDEIGFLVRKNSHIKTIKELDGKHIGVAQGATTKVNLEKYAKEHKLKFSYAQLGSFPELA 183 Query: 184 AAYRAHRCDAYTGDISAL 201 + A+R DA++ D S L Sbjct: 184 ISLYANRIDAFSVDKSIL 201 >gi|257095474|ref|YP_003169115.1| family 3 extracellular solute-binding protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047998|gb|ACV37186.1| extracellular solute-binding protein family 3 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 285 Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 62/191 (32%), Positives = 92/191 (48%), Gaps = 12/191 (6%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQY 80 S+L IK+ G LK G + F+ V + +G+ VD CR ++ + D P +++ Sbjct: 26 SVLARIKQSGTLKLGYRENSMPFSFVGDDKQPRGYSVDLCRIVAEDLGKQLDLPKLDVRW 85 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +P+ A+ RF AL+S ID+ NT TL R F +T+ DG G + + SS+ Sbjct: 86 VPVTAQSRFEALKSGAIDLECGNTTQTLARRADFD--FSLMTFIDGAGLLFLDGEVPSSL 143 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR---CDAYTGD 197 G + V AGTTTE TL D A + + I +V + DAA RA + AY D Sbjct: 144 EATKGQRVAVVAGTTTEKTLEDLIAAGKLGVYLI---KVPDHDAALRALKDKTATAYAAD 200 Query: 198 ISALYALKLTN 208 + L L Sbjct: 201 RTVLITTALVR 211 >gi|257094459|ref|YP_003168100.1| family 3 extracellular solute-binding protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046983|gb|ACV36171.1| extracellular solute-binding protein family 3 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 284 Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 62/234 (26%), Positives = 107/234 (45%), Gaps = 7/234 (2%) Query: 9 ILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 +LC+ L F + A L IK + G + F+ + G+ VD C + Sbjct: 7 LLCVATALSFPLSALAAGTLDKIKASRTISLGYREASIPFSYTGDDNQPWGYSVDLCTRV 66 Query: 68 SSAIFD----DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 ++AI + ++Q++P+ + R L+S ID+ +T +L R + F +T+ Sbjct: 67 AAAIVKQLGLEELQLQWVPVTPETRVAKLKSGAIDLECGSTTSSLARMQEVD--FSLLTF 124 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 DG ++ K GI + L+G I V AGTT+E T+A+ H + + ++ Sbjct: 125 VDGGSYLTRKASGIKRLDDLAGKRIAVAAGTTSERTIAEALTQHQVGAQLVKVSDHQQGL 184 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 AA + DAY D S L L L + S+ V+ P+ S P A + + D ++ Sbjct: 185 AAMVQGKVDAYASDRSLLIGLALDSGNQSDWVLGPETFSYEPYALMMRRNDADF 238 >gi|227488162|ref|ZP_03918478.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51867] gi|227091880|gb|EEI27192.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51867] Length = 80 Score = 81.6 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 34/79 (43%), Positives = 53/79 (67%), Gaps = 1/79 (1%) Query: 185 AYRAHRCDAYTGDISALYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 A+ A RCD ++ D S L +++++ P ++V+LP+IISK PL P + QGD W N+V W Sbjct: 2 AFAAGRCDVFSTDASGLASIRISKLQNPDDYVVLPEIISKEPLGPFVRQGDDAWLNVVRW 61 Query: 244 THYAMVTAEELGITQKNIN 262 + AM+ AEE G+T N++ Sbjct: 62 SLSAMIEAEEYGVTSANVD 80 >gi|240168877|ref|ZP_04747536.1| putative glutamine-binding lipoprotein [Mycobacterium kansasii ATCC 12478] Length = 328 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 63/213 (29%), Positives = 100/213 (46%), Gaps = 18/213 (8%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTG--LVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 F T +A++ +I +RG L G++ G L F + GD GFDVD ++ IF Sbjct: 75 FRTKAEADAAV-ANIHERGRLIVGLDIGSNLFSFRD-PITGDITGFDVDIAGEVARDIFG 132 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG-QGFIMH 132 PS ++Y L+A ER ALQ+ Q+D++ + T R + + Y D Q + Sbjct: 133 SPSHVEYRILSAAERITALQTSQVDVVVKTMTITCERRKLVNFS---TVYLDANQRILAP 189 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA--AYRAHR 190 + IS VS LSG +CV GTT+ + + P++ V D A + + Sbjct: 190 RDSSISKVSDLSGKRVCVARGTTS------LRRIREIAPPPVIVSVVNWADCLVAMQQRQ 243 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 DA + D S L L + P H++ PD+ ++ Sbjct: 244 IDAVSTDDSILAG--LVEEDPYLHIVGPDMANQ 274 >gi|24379909|ref|NP_721864.1| putative ABC transporter, glutamine binding protein [Streptococcus mutans UA159] gi|24377888|gb|AAN59170.1|AE014984_5 putative ABC transporter, glutamine binding protein [Streptococcus mutans UA159] Length = 270 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 57/209 (27%), Positives = 105/209 (50%), Gaps = 16/209 (7%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGD---------IKKRGFLKCGINTGLVGFAEVKA- 52 K F +S+ LI++ TS S + + D IK+ G LK G+ + F A Sbjct: 4 KKFLISLAALIMIA-TSLSGLSKVNADNVTSPQVKKIKRAGVLKVGVKQDVPNFGYYNAE 62 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G ++G ++D R ++ +I K++ +P+ + R + + Q+D++ T R+ Sbjct: 63 TGKYEGMEIDIARKIAKSI---GVKLELVPVTTQTREPLMDNGQVDLVIATYTITPERQA 119 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 S ++ +P Y+D GF++ + IS +S L G +I V G TT++ L Y K H++K++ Sbjct: 120 SYSIS-KPY-YYDQIGFLVRQSSKISKISDLDGLTIGVSQGATTKVNLEAYAKKHHLKFN 177 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISAL 201 + E+ + + R DA++ D S L Sbjct: 178 YVQLGSFPELAISLYSKRIDAFSVDKSIL 206 >gi|25010745|ref|NP_735140.1| hypothetical protein gbs0690 [Streptococcus agalactiae NEM316] gi|77410777|ref|ZP_00787135.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus agalactiae CJB111] gi|23095099|emb|CAD46334.1| unknown [Streptococcus agalactiae NEM316] gi|77163156|gb|EAO74109.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus agalactiae CJB111] gi|319744751|gb|EFV97093.1| polar amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus agalactiae ATCC 13813] Length = 266 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 55/198 (27%), Positives = 97/198 (48%), Gaps = 7/198 (3%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDF 63 + +S + + +LF+ + ST+A+ L +IKK G LK G+ + F A + ++G ++D Sbjct: 10 YLLSCIFIFLLFYPN-STSANQLSEIKKSGVLKVGVKQDVPNFGYYNAETNQYEGMEIDI 68 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 + ++ ++ P ++P A+ R + + QIDIL +T+ E Y Sbjct: 69 AKKIAKSLGVKPV---FVPTTAQTREPLMDNGQIDILI--ATYTITPERKANYNISKAYY 123 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 D GF++ K I ++ +L G I V G TT+ L Y K H +K+ E+ Sbjct: 124 HDEIGFLVRKNSHIKTIKELDGKHIGVAQGATTKGNLEKYAKEHKLKFSYAQLGSFPELA 183 Query: 184 AAYRAHRCDAYTGDISAL 201 + A+R DA++ D S L Sbjct: 184 ISLYANRIDAFSVDKSIL 201 >gi|223999121|ref|XP_002289233.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220974441|gb|EED92770.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 871 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 72/305 (23%), Positives = 133/305 (43%), Gaps = 55/305 (18%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L +++RG+++CG+ + + + F D CR++++ + DP I ++ Sbjct: 358 LAIVQERGYVRCGL---------FQKKTEARNFRRDLCRSVAAVVLLDPDSIIETDVHVN 408 Query: 87 ERFLALQSKQIDILSRNTDWTLLREIS-----LGLAFRPITYFDGQGF--------IMHK 133 RF L + +D+L+ +TL RE++ G +F Y+DG F + Sbjct: 409 NRFPMLYDRAVDLLAAGETYTLEREVNEPTTGAGFSFTTPYYYDGMVFGGNSTSVYCAEE 468 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 +K + L ICVQ TT ++ F A ++ V + E + +C+A Sbjct: 469 RKRYDECANLK---ICVQESTTHYSYVSANFAA---GFYTSV-RSLSESAVFFLQDKCNA 521 Query: 194 YTGD-ISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 + G+ + L ++ + N + V++ + + PL+ A D EW +IV+W A++ Sbjct: 522 FAGERMEILSSVSIQNLTETNAVVIGNKTYTSEPLSIATRNDDQEWSDIVNWVIQALIFG 581 Query: 252 EELGITQKNI---NQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGE 308 EE G+ + + N DTTN + FL + +GNYG+ Sbjct: 582 EENGLVKNSSLCENSTIVDTTNTGLN-FLNS--------------------VYCVGNYGQ 620 Query: 309 MFDRN 313 +F RN Sbjct: 621 LFARN 625 >gi|322372851|ref|ZP_08047387.1| polar amino acid uptake (PAAT) family ABC transporter, amino acid-binding protein [Streptococcus sp. C150] gi|321277893|gb|EFX54962.1| polar amino acid uptake (PAAT) family ABC transporter, amino acid-binding protein [Streptococcus sp. C150] Length = 277 Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 50/180 (27%), Positives = 90/180 (50%), Gaps = 6/180 (3%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYL 81 N+ + I KRG L G+ + F A + ++G +VD + ++ + K+ Y+ Sbjct: 38 NSKAVQKIVKRGTLNVGVKQDVPNFGYYSAKTNTYEGMEVDLAKKIADEL---KVKVNYI 94 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 P+ + R + + ID+L +T+ E A Y+D GF++ K GI+ +S Sbjct: 95 PVTTQTREPLMDNGTIDLLIGT--YTINDERKASYAISSPYYYDQIGFLVLKDSGINKIS 152 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L+G +I V G +T+ L +Y AHN+K++ + E+ + AHR +A++ D S L Sbjct: 153 DLNGKTIGVSQGASTKAALQEYASAHNLKFNYVQLGSFPELAVSLYAHRVNAFSVDKSIL 212 >gi|228476953|ref|ZP_04061593.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus salivarius SK126] gi|228251372|gb|EEK10533.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus salivarius SK126] Length = 224 Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 15/204 (7%) Query: 8 SILCLIILFFTSFSTNA---SILGDIK------KRGFLKCGINTGLVGFAEVKANGD-WK 57 S+ L I TS T A S L D K KRG L G+ + F A + ++ Sbjct: 14 SLAILTIFLITSHKTKAEDTSKLLDSKAVQKIVKRGTLNVGVKQDVPNFGYYSAKTNTYE 73 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G +VD + ++ + K+ Y+P+ + R + + ID+L +T+ E A Sbjct: 74 GMEVDLAKKIADEL---KVKVNYIPVTTQTREPLMDNGTIDLLIAT--YTINDERKASYA 128 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y+D GF++ K GI+ +S L+G +I V G +T+ L +Y A+N+K++ + Sbjct: 129 ISTPYYYDQIGFLVLKDSGINKISDLNGKTIGVSQGASTKAALQEYASANNLKFNYVQLG 188 Query: 178 RVEEIDAAYRAHRCDAYTGDISAL 201 E+ + AHR DA++ D S L Sbjct: 189 SFPELAVSLYAHRVDAFSVDKSIL 212 >gi|312862723|ref|ZP_07722963.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus vestibularis F0396] gi|311101583|gb|EFQ59786.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus vestibularis F0396] Length = 277 Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 61/217 (28%), Positives = 107/217 (49%), Gaps = 22/217 (10%) Query: 1 MYKDF--FVSILCLIIL---FFTSFSTNA---SILGDIK------KRGFLKCGINTGL-- 44 ++K F ++++ CL I+ +S+ T A S L D K KRG L G+ + Sbjct: 2 IFKKFLRYLTVACLAIVTIFLISSYKTKAEDTSKLLDSKAVQKIVKRGTLNVGVKQDVPN 61 Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 G+ K N ++G +VD + ++ + K+ Y+P+ + R + + ID+L Sbjct: 62 FGYYSAKTNS-YEGMEVDLAKKIADEL---KVKVNYIPVTTQTREPLMDNGTIDLLIGT- 116 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164 +T+ E A Y D GF++ K GI+ +S L+G +I V G +T+ L +Y Sbjct: 117 -YTINDERKASYAISDPYYHDQIGFLVLKNSGINKISDLNGKTIGVSQGASTKAALQEYA 175 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 AHN+K++ + E+ + AHR +A++ D S L Sbjct: 176 SAHNLKFNYVQLGSFPELAVSLYAHRVNAFSVDKSIL 212 >gi|290580111|ref|YP_003484503.1| putative ABC transporter glutamine binding protein [Streptococcus mutans NN2025] gi|254997010|dbj|BAH87611.1| putative ABC transporter glutamine binding protein [Streptococcus mutans NN2025] Length = 270 Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 56/209 (26%), Positives = 104/209 (49%), Gaps = 16/209 (7%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGD---------IKKRGFLKCGINTGLVGFAEVKA- 52 K F +S+ LI++ T S + + D IK+ G LK G+ + F A Sbjct: 4 KKFLISLAALIMIA-TGLSGLSKVNADNVTSPQVKKIKRAGVLKVGVKQDVPNFGYYNAE 62 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G ++G ++D R ++ +I K++ +P+ + R + + Q+D++ T R+ Sbjct: 63 TGKYEGMEIDIARKIAKSI---GVKLELVPVTTQTREPLMDNGQVDLVIATYTITPERQA 119 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 S ++ +P Y+D GF++ + IS +S L G +I V G TT++ L Y K H++K++ Sbjct: 120 SYSIS-KPY-YYDQIGFLVRQSSKISKISDLDGLTIGVSQGATTKVNLEAYAKKHHLKFN 177 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISAL 201 + E+ + + R DA++ D S L Sbjct: 178 YVQLGSFPELAISLYSKRIDAFSVDKSIL 206 >gi|325121846|gb|ADY81369.1| putative ABC transporter, periplasmic binding protein, amino acid [Acinetobacter calcoaceticus PHEA-2] Length = 286 Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 66/249 (26%), Positives = 117/249 (46%), Gaps = 11/249 (4%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L +KK G L+ + F V + G+ +GFDV + ++ + D K++++ A Sbjct: 41 LEQVKKNGVLRVAVFADDPPFGYVDSAGNNQGFDVALAKRVTKDLLGDEKKVEFIVTEAS 100 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ-GFIMHKKKGISSVSQLSG 145 R L+S + D++ T R+ + A P Y G G + K K I+ ++QL G Sbjct: 101 NRVEFLKSNRADVVFATFTVTPERKEVVDFA-EP--YLKGAFGIVSPKAKPITDIAQLEG 157 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 ++ V GT+++ YF H K + + FER + A R DA + D + YAL Sbjct: 158 KTLIVNKGTSSDT----YFTKHYPKVNLLKFERNSDAFKALTDGRGDAISQD--STYALA 211 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQKNINQV 264 PS + I + +APA+ +G+T+ N ++ + T+ E+ I + + + Sbjct: 212 WAAKNPSYVAGIQSIGDQEFIAPAVKKGNTQLLNWLNTEIKQLRTSGEINKIYDETLKPI 271 Query: 265 SKDTTNPDV 273 D+ NP+V Sbjct: 272 YGDSVNPNV 280 >gi|154148477|ref|YP_001406034.1| antigenic protein [Campylobacter hominis ATCC BAA-381] gi|153804486|gb|ABS51493.1| antigenic protein [Campylobacter hominis ATCC BAA-381] Length = 266 Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 60/227 (26%), Positives = 110/227 (48%), Gaps = 10/227 (4%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 S L +IK+ +K G+ L F+ +G+++GF++ +A+ ++I +IQ + L Sbjct: 10 GSTLEEIKQSKVIKIGVRLNLPPFSNQNEHGEFEGFEISLAKAIGASILGKNGEIQLVGL 69 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 NAK+R LQ+ +D++ N T R S+ A ++ + QG + K + I S+SQL Sbjct: 70 NAKDRIPYLQNGTVDLILANFSKTEERAKSVDFATPYLS--NTQGILTKKSENIRSISQL 127 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKY--HPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 +G I GTTT+ DY KA+ K P+ + V + + + D Y + Sbjct: 128 AGKKILFIKGTTTD----DYLKANAAKLGITPVECQSVNKCFQSLQKGEADGYMHTSILI 183 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 L+L +D + + +I S + P + +G+ V+ + Y + Sbjct: 184 AFLQLLDDNI--EMGIQNIGSIEFICPGVKKGNEALLEAVNASIYNL 228 >gi|77415016|ref|ZP_00791094.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus agalactiae 515] gi|77158934|gb|EAO70167.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus agalactiae 515] Length = 200 Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 52/192 (27%), Positives = 95/192 (49%), Gaps = 7/192 (3%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDF 63 + +S + + +LF+ + ST+A+ L +IKK G LK G+ + F A + ++G ++D Sbjct: 10 YLLSCIFIFLLFYPN-STSANQLSEIKKSGVLKVGVKQDVPNFGYHNAETNQYEGMEIDI 68 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 + ++ ++ P ++P A+ R + + QIDIL +T+ E Y Sbjct: 69 AKKIAKSLGVKPV---FVPTTAQTREPLMDNGQIDILI--ATYTITPERKANYNISKAYY 123 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 D GF++ K I ++ +L G I V G TT++ L Y K H +K+ E+ Sbjct: 124 HDEIGFLVRKNSHIKTIKELDGKHIGVAQGATTKVNLEKYAKEHKLKFSYAXLGSFPELA 183 Query: 184 AAYRAHRCDAYT 195 + A+R DA++ Sbjct: 184 ISLYANRIDAFS 195 >gi|167628301|ref|YP_001678800.1| glutamine abc transporter, glutamine-binding protein [Heliobacterium modesticaldum Ice1] gi|167591041|gb|ABZ82789.1| glutamine abc transporter, glutamine-binding protein [Heliobacterium modesticaldum Ice1] Length = 282 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 60/222 (27%), Positives = 107/222 (48%), Gaps = 10/222 (4%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW-KGFDVDFCRALSSAIFDDPSKIQY 80 T+ + IK RG+L G+ + F ++K+ D +GF+VD + L+ +F D SK++ Sbjct: 44 TSGDYIQTIKNRGYLIAGVKNDVPLFGQLKSGADKPEGFEVDIMKELAKKLFGDESKVKL 103 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + ++ R LQ+ QIDI++ T T+ E + F + + GQ ++ K I SV Sbjct: 104 EKVESQTRIPMLQNGQIDIVAGTT--TITEERKKQIDFSDVYFKAGQSLLVKKGSPIKSV 161 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + L G ++ G+T+ + + KA + K + E A + R DA T D S Sbjct: 162 TDLKGKTVSTVRGSTSAKNIRE--KAPDAKVDE--YATYTEAFQALKLGRSDAMTTDNSI 217 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 L + N+ P+ ++ + ++ P +G EW N V+ Sbjct: 218 L--MGFANEDPNFELV-GGLFTEEPYGFGFQKGHPEWVNYVN 256 >gi|260550584|ref|ZP_05824793.1| ArtI protein [Acinetobacter sp. RUH2624] gi|260406295|gb|EEW99778.1| ArtI protein [Acinetobacter sp. RUH2624] Length = 286 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 66/249 (26%), Positives = 117/249 (46%), Gaps = 11/249 (4%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L +KK G L+ + F V + G+ +GFDV + ++ + D K++++ A Sbjct: 41 LEQVKKNGVLRVAVFADDPPFGYVDSAGNNQGFDVALAKRVTKDLLGDEKKVEFIVTEAS 100 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ-GFIMHKKKGISSVSQLSG 145 R L+S + D++ T R+ + A P Y G G + K K I+ ++QL G Sbjct: 101 NRVEFLKSNRADVVFATFTVTPERKEVVDFA-EP--YLKGAFGIVSPKAKPITDIAQLEG 157 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 ++ V GT+++ YF H K + + FER + A R DA + D + YAL Sbjct: 158 KTLIVNKGTSSDT----YFTKHYPKVNLLKFERNSDAFKALTDGRGDAISQD--STYALA 211 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQV 264 PS + I + +APA+ +G+T+ N ++ + T+ E+ I + + + Sbjct: 212 WAAKNPSYVAGIQSIGDQEFIAPAVKKGNTQLLNWLNTEIKQLRTSGEIKKIYDETLKPI 271 Query: 265 SKDTTNPDV 273 D+ NP+V Sbjct: 272 YGDSVNPNV 280 >gi|239503576|ref|ZP_04662886.1| Glutamine-binding protein precursor (GlnBP) [Acinetobacter baumannii AB900] Length = 286 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 66/249 (26%), Positives = 117/249 (46%), Gaps = 11/249 (4%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L +KK G L+ + F V + G+ +GFDV + ++ + D K++++ A Sbjct: 41 LEQVKKNGVLRVAVFADDPPFGYVDSAGNNQGFDVALAKRVTKDLLGDEKKVEFIVTEAS 100 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ-GFIMHKKKGISSVSQLSG 145 R L+S + D++ T R+ + A P Y G G + K K I+ ++QL G Sbjct: 101 NRVEFLKSNRADVVLATFTVTPERKEVVDFA-EP--YLKGAFGIVSPKAKPITDIAQLEG 157 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 ++ V GT+++ YF H K + + FER + A R DA + D + YAL Sbjct: 158 KTLIVNKGTSSDT----YFTKHYPKVNLLKFERNSDAFKALTDGRGDAISQD--STYALA 211 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQV 264 PS + I + +APA+ +G+T+ N ++ + T+ E+ I + + + Sbjct: 212 WAAKNPSYVAGIQSIGDQEFIAPAVKKGNTQLLNWLNTEIKQLRTSGEIKKIYDETLKPI 271 Query: 265 SKDTTNPDV 273 D+ NP+V Sbjct: 272 YGDSVNPNV 280 >gi|258406149|ref|YP_003198891.1| extracellular solute-binding protein family 3 [Desulfohalobium retbaense DSM 5692] gi|257798376|gb|ACV69313.1| extracellular solute-binding protein family 3 [Desulfohalobium retbaense DSM 5692] Length = 275 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 65/252 (25%), Positives = 116/252 (46%), Gaps = 20/252 (7%) Query: 6 FVSILCLIILFFTSFSTNASILG----DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 F IL L ++F FS A + G + K ++ G+ T + A + +W GFDV Sbjct: 3 FGKILFLAVIF-ALFSAQAVLAGPTYDQVMKDKVIRAGLMTDSIPGAFYNKDNEWVGFDV 61 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D + ++ + +++ +P+ K R +Q +ID+ N T RE + F Sbjct: 62 DIAKEIAKRL---DCELKRVPVTNKTRIAFVQQGRIDMSVANM--THKRERDKSIDFSIT 116 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA---HNMKYHPIVFER 178 +FDGQ ++ KK ++ ++ G I GTT+E+ L + + N + I F++ Sbjct: 117 YFFDGQKLLV-KKGSFANWDEIVGQKIATMQGTTSEVNLKNKLEELGDTNADDNVISFQK 175 Query: 179 VEEIDAAYRAHRCDAYTGDISAL--YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E A R ++ D + L YA K RP E+ ++ D IS P + + D++ Sbjct: 176 ESECFQALEMGRVAGWSTDSTILLGYAAK----RPGEYELIGDFISDEPYGIGLPEDDSK 231 Query: 237 WYNIVSWTHYAM 248 W + +++T M Sbjct: 232 WRDTINFTIQDM 243 >gi|218888235|ref|YP_002437556.1| extracellular solute-binding protein family 3 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218759189|gb|ACL10088.1| extracellular solute-binding protein family 3 [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 271 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 58/237 (24%), Positives = 112/237 (47%), Gaps = 15/237 (6%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALS 68 LC+++ T +A + DIK RG L CG+ V F + + + GFD+D C+A++ Sbjct: 11 LCVVL---TGTMAHAGKIEDIKARGALVCGVKDSTVPFGYIDEQSKQIVGFDIDICKAVA 67 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF-DGQ 127 + K++ + + R L +D+++ R+ + + ITYF DGQ Sbjct: 68 DKL---GVKLELKTVTSATRIPMLTQGSVDMVAATMTHKFERDDVIDFS---ITYFMDGQ 121 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 ++ K G+ S + L G + G+T+E + KA + + F+ + A + Sbjct: 122 KLLVKKGGGVKSAADLKGKKVATAKGSTSEKNI----KAAQPEATVVSFDEYPQAFLALK 177 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + +A T D + L L+ ++ P + I+ D IS P + + D+++ ++V+ T Sbjct: 178 QGKAEAVTTDSTILLGLRNSDPEPDKWEIVGDYISPEPYGLGLAENDSKFRDLVNRT 234 >gi|260555372|ref|ZP_05827593.1| ArtI protein [Acinetobacter baumannii ATCC 19606] gi|260411914|gb|EEX05211.1| ArtI protein [Acinetobacter baumannii ATCC 19606] Length = 286 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 66/249 (26%), Positives = 117/249 (46%), Gaps = 11/249 (4%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L +KK G L+ + F V + G+ +GFDV + ++ + D K++++ A Sbjct: 41 LEQVKKNGVLRVAVFADDPPFGYVDSAGNNQGFDVALAKRVTKDLLGDEKKVEFIVTEAS 100 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ-GFIMHKKKGISSVSQLSG 145 R L+S + D++ T R+ + A P Y G G + K K I+ ++QL G Sbjct: 101 NRVEFLKSNRADVVFATFTVTPERKEVVDFA-EP--YLKGAFGIVSPKAKPITDIAQLEG 157 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 ++ V GT+++ YF H K + + FER + A R DA + D + YAL Sbjct: 158 KTLIVNKGTSSDT----YFTKHYPKVNLLKFERNSDAFKALTDGRGDAISQD--STYALA 211 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQV 264 PS + I + +APA+ +G+T+ N ++ + T+ E+ I + + + Sbjct: 212 WAAKNPSYVAGIQSIGDQEFIAPAVKKGNTQLLNWLNTEIKQLRTSGEIKKIYDETLKPI 271 Query: 265 SKDTTNPDV 273 D+ NP+V Sbjct: 272 YGDSVNPNV 280 >gi|289744107|ref|ZP_06503485.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis 02_1987] gi|289684635|gb|EFD52123.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis 02_1987] Length = 337 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 62/210 (29%), Positives = 96/210 (45%), Gaps = 18/210 (8%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTG--LVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 F T +A++ DI+ RG L G++ G L F + G+ GFDVD ++ IF Sbjct: 84 FATKAEADAAV-ADIRARGRLIVGLDIGSNLFSFRD-PITGEITGFDVDIAGEVARDIFG 141 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG-QGFIMH 132 PS ++Y L+A ER ALQ Q+DI+ + T R + + Y D Q + Sbjct: 142 VPSHVEYRILSAAERVTALQKSQVDIVVKTMSITCERRKLVNFS---TVYLDANQRILAP 198 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA--AYRAHR 190 + I+ VS LSG +CV GTT+ + + P++ V D A + Sbjct: 199 RDSPITKVSDLSGKRVCVARGTTS------LRRIREIAPPPVIVSVVNWADCLVALQQRE 252 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDI 220 DA + D + L L + P H++ PD+ Sbjct: 253 IDAVSTDDTILAG--LVEEDPYLHIVGPDM 280 >gi|323721082|gb|EGB30144.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis CDC1551A] Length = 329 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 62/210 (29%), Positives = 96/210 (45%), Gaps = 18/210 (8%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTG--LVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 F T +A++ DI+ RG L G++ G L F + G+ GFDVD ++ IF Sbjct: 76 FATKAEADAAV-ADIRARGRLIVGLDIGSNLFSFRD-PITGEITGFDVDIAGEVARDIFG 133 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG-QGFIMH 132 PS ++Y L+A ER ALQ Q+DI+ + T R + + Y D Q + Sbjct: 134 VPSHVEYRILSAAERVTALQKSQVDIVVKTMSITCERRKLVNFS---TVYLDANQRILAP 190 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA--AYRAHR 190 + I+ VS LSG +CV GTT+ + + P++ V D A + Sbjct: 191 RDSPITKVSDLSGKRVCVARGTTS------LRRIREIAPPPVIVSVVNWADCLVALQQRE 244 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDI 220 DA + D + L L + P H++ PD+ Sbjct: 245 IDAVSTDDTILAG--LVEEDPYLHIVGPDM 272 >gi|193077069|gb|ABO11827.2| ArtI protein [Acinetobacter baumannii ATCC 17978] Length = 286 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 66/249 (26%), Positives = 117/249 (46%), Gaps = 11/249 (4%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L +KK G L+ + F V + G+ +GFDV + ++ + D K++++ A Sbjct: 41 LEQVKKNGVLRVAVFADDPPFGYVDSAGNNQGFDVALAKRVTKDLLGDEKKVEFIVTEAS 100 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ-GFIMHKKKGISSVSQLSG 145 R L+S + D++ T R+ + A P Y G G + K K I+ ++QL G Sbjct: 101 NRVEFLKSNRADVVFATFTVTPERKEVVDFA-EP--YLKGAFGIVSPKAKPITDIAQLEG 157 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 ++ V GT+++ YF H K + + FER + A R DA + D + YAL Sbjct: 158 KTLIVNKGTSSDT----YFTKHYPKVNLLKFERNSDAFKALTDGRGDAISQD--STYALA 211 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQV 264 PS + I + +APA+ +G+T+ N ++ + T+ E+ I + + + Sbjct: 212 WAAKNPSYVAGIQSIGDQEFIAPAVKKGNTQLLNWLNTEIKQLRTSGEIKKIYDETLKPI 271 Query: 265 SKDTTNPDV 273 D+ NP+V Sbjct: 272 YGDSVNPNV 280 >gi|215402161|ref|ZP_03414342.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis 02_1987] Length = 329 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 62/210 (29%), Positives = 96/210 (45%), Gaps = 18/210 (8%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTG--LVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 F T +A++ DI+ RG L G++ G L F + G+ GFDVD ++ IF Sbjct: 76 FATKAEADAAV-ADIRARGRLIVGLDIGSNLFSFRD-PITGEITGFDVDIAGEVARDIFG 133 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG-QGFIMH 132 PS ++Y L+A ER ALQ Q+DI+ + T R + + Y D Q + Sbjct: 134 VPSHVEYRILSAAERVTALQKSQVDIVVKTMSITCERRKLVNFS---TVYLDANQRILAP 190 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA--AYRAHR 190 + I+ VS LSG +CV GTT+ + + P++ V D A + Sbjct: 191 RDSPITKVSDLSGKRVCVARGTTS------LRRIREIAPPPVIVSVVNWADCLVALQQRE 244 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDI 220 DA + D + L L + P H++ PD+ Sbjct: 245 IDAVSTDDTILAG--LVEEDPYLHIVGPDM 272 >gi|308369386|ref|ZP_07666727.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu002] gi|308370400|ref|ZP_07666925.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu003] gi|308372885|ref|ZP_07667473.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu005] gi|308375151|ref|ZP_07442886.2| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu007] gi|308327701|gb|EFP16552.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu002] gi|308332063|gb|EFP20914.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu003] gi|308339455|gb|EFP28306.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu005] gi|308347232|gb|EFP36083.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu007] Length = 308 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 62/210 (29%), Positives = 96/210 (45%), Gaps = 18/210 (8%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTG--LVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 F T +A++ DI+ RG L G++ G L F + G+ GFDVD ++ IF Sbjct: 55 FATKAEADAAV-ADIRARGRLIVGLDIGSNLFSFRD-PITGEITGFDVDIAGEVARDIFG 112 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG-QGFIMH 132 PS ++Y L+A ER ALQ Q+DI+ + T R + + Y D Q + Sbjct: 113 VPSHVEYRILSAAERVTALQKSQVDIVVKTMSITCERRKLVNFS---TVYLDANQRILAP 169 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA--AYRAHR 190 + I+ VS LSG +CV GTT+ + + P++ V D A + Sbjct: 170 RDSPITKVSDLSGKRVCVARGTTS------LRRIREIAPPPVIVSVVNWADCLVALQQRE 223 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDI 220 DA + D + L L + P H++ PD+ Sbjct: 224 IDAVSTDDTILAG--LVEEDPYLHIVGPDM 251 >gi|15607552|ref|NP_214925.1| glutamine-binding lipoprotein [Mycobacterium tuberculosis H37Rv] gi|15839797|ref|NP_334834.1| amino acid ABC transporter, amino acid-binding protein [Mycobacterium tuberculosis CDC1551] gi|31791589|ref|NP_854082.1| glutamine-binding lipoprotein [Mycobacterium bovis AF2122/97] gi|121636325|ref|YP_976548.1| putative glutamine-binding lipoprotein glnH [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148660176|ref|YP_001281699.1| amino acid ABC transporter substrate-binding protein [Mycobacterium tuberculosis H37Ra] gi|148821607|ref|YP_001286361.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis F11] gi|167970774|ref|ZP_02553051.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis H37Ra] gi|215409923|ref|ZP_03418731.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis 94_M4241A] gi|215429231|ref|ZP_03427150.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis EAS054] gi|215444497|ref|ZP_03431249.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis T85] gi|218752041|ref|ZP_03530837.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis GM 1503] gi|219556230|ref|ZP_03535306.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis T17] gi|224988797|ref|YP_002643484.1| putative glutamine-binding lipoprotein [Mycobacterium bovis BCG str. Tokyo 172] gi|253797334|ref|YP_003030335.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis KZN 1435] gi|254363375|ref|ZP_04979421.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis str. Haarlem] gi|254549356|ref|ZP_05139803.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260185276|ref|ZP_05762750.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis CPHL_A] gi|260199407|ref|ZP_05766898.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis T46] gi|260203559|ref|ZP_05771050.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis K85] gi|289441790|ref|ZP_06431534.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis T46] gi|289445950|ref|ZP_06435694.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis CPHL_A] gi|289552660|ref|ZP_06441870.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis KZN 605] gi|289568326|ref|ZP_06448553.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis T17] gi|289572996|ref|ZP_06453223.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis K85] gi|289752440|ref|ZP_06511818.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis EAS054] gi|289756480|ref|ZP_06515858.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis T85] gi|289760527|ref|ZP_06519905.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis GM 1503] gi|294995916|ref|ZP_06801607.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis 210] gi|297632893|ref|ZP_06950673.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis KZN 4207] gi|297729868|ref|ZP_06958986.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis KZN R506] gi|298523887|ref|ZP_07011296.1| amino acid ABC transporter, amino acid-binding protein [Mycobacterium tuberculosis 94_M4241A] gi|306774505|ref|ZP_07412842.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu001] gi|306787410|ref|ZP_07425732.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu004] gi|306796149|ref|ZP_07434451.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu006] gi|306966414|ref|ZP_07479075.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu009] gi|306970609|ref|ZP_07483270.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu010] gi|307078335|ref|ZP_07487505.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu011] gi|307082893|ref|ZP_07492006.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu012] gi|313657197|ref|ZP_07814077.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis KZN V2475] gi|1817677|emb|CAB06581.1| PROBABLE GLUTAMINE-BINDING LIPOPROTEIN GLNH (GLNBP) [Mycobacterium tuberculosis H37Rv] gi|13879927|gb|AAK44648.1| amino acid ABC transporter, amino acid-binding protein [Mycobacterium tuberculosis CDC1551] gi|31617175|emb|CAD93282.1| PROBABLE GLUTAMINE-BINDING LIPOPROTEIN GLNH (GLNBP) [Mycobacterium bovis AF2122/97] gi|121491972|emb|CAL70435.1| Probable glutamine-binding lipoprotein glnH [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|134148889|gb|EBA40934.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis str. Haarlem] gi|148504328|gb|ABQ72137.1| amino acid ABC transporter substrate-binding protein [Mycobacterium tuberculosis H37Ra] gi|148720134|gb|ABR04759.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis F11] gi|224771910|dbj|BAH24716.1| putative glutamine-binding lipoprotein [Mycobacterium bovis BCG str. Tokyo 172] gi|253318837|gb|ACT23440.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis KZN 1435] gi|289414709|gb|EFD11949.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis T46] gi|289418908|gb|EFD16109.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis CPHL_A] gi|289437292|gb|EFD19785.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis KZN 605] gi|289537427|gb|EFD42005.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis K85] gi|289542079|gb|EFD45728.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis T17] gi|289693027|gb|EFD60456.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis EAS054] gi|289708033|gb|EFD72049.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis GM 1503] gi|289712044|gb|EFD76056.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis T85] gi|298493681|gb|EFI28975.1| amino acid ABC transporter, amino acid-binding protein [Mycobacterium tuberculosis 94_M4241A] gi|308216857|gb|EFO76256.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu001] gi|308335878|gb|EFP24729.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu004] gi|308343320|gb|EFP32171.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu006] gi|308355813|gb|EFP44664.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu009] gi|308359733|gb|EFP48584.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu010] gi|308363675|gb|EFP52526.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu011] gi|308367326|gb|EFP56177.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu012] gi|326902236|gb|EGE49169.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis W-148] gi|328457121|gb|AEB02544.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis KZN 4207] Length = 328 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 62/210 (29%), Positives = 96/210 (45%), Gaps = 18/210 (8%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTG--LVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 F T +A++ DI+ RG L G++ G L F + G+ GFDVD ++ IF Sbjct: 75 FATKAEADAAV-ADIRARGRLIVGLDIGSNLFSFRD-PITGEITGFDVDIAGEVARDIFG 132 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG-QGFIMH 132 PS ++Y L+A ER ALQ Q+DI+ + T R + + Y D Q + Sbjct: 133 VPSHVEYRILSAAERVTALQKSQVDIVVKTMSITCERRKLVNFS---TVYLDANQRILAP 189 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA--AYRAHR 190 + I+ VS LSG +CV GTT+ + + P++ V D A + Sbjct: 190 RDSPITKVSDLSGKRVCVARGTTS------LRRIREIAPPPVIVSVVNWADCLVALQQRE 243 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDI 220 DA + D + L L + P H++ PD+ Sbjct: 244 IDAVSTDDTILAG--LVEEDPYLHIVGPDM 271 >gi|293608419|ref|ZP_06690722.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292828992|gb|EFF87354.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 286 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 66/249 (26%), Positives = 117/249 (46%), Gaps = 11/249 (4%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L +KK G L+ + F V + G+ +GFDV + ++ + D K++++ A Sbjct: 41 LEQVKKNGVLRVAVFADDPPFGFVDSAGNNQGFDVALAKRVTKDLLGDEKKVEFIVTEAS 100 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ-GFIMHKKKGISSVSQLSG 145 R L+S + D++ T R+ + A P Y G G + K K I+ ++QL G Sbjct: 101 NRVEFLKSNRADVVFATFTVTPERKEVVDFA-EP--YLKGAFGIVSPKAKPITDIAQLEG 157 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 ++ V GT+++ YF H K + + FER + A R DA + D + YAL Sbjct: 158 KTLIVNKGTSSDT----YFTKHYPKVNLLKFERNSDAFKALTDGRGDAISQD--STYALA 211 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQV 264 PS + I + +APA+ +G+T+ N ++ + T+ E+ I + + + Sbjct: 212 WAAKNPSYVAGIQSIGDQEFIAPAVKKGNTQLLNWLNTEIKQLRTSGEIKKIYDETLKPI 271 Query: 265 SKDTTNPDV 273 D+ NP+V Sbjct: 272 YGDSVNPNV 280 >gi|184157761|ref|YP_001846100.1| amino acid ABC transporter periplasmic protein [Acinetobacter baumannii ACICU] gi|294842167|ref|ZP_06786850.1| amino acid ABC transporter periplasmic protein [Acinetobacter sp. 6014059] gi|183209355|gb|ACC56753.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Acinetobacter baumannii ACICU] gi|322508071|gb|ADX03525.1| ArtI protein [Acinetobacter baumannii 1656-2] gi|323517653|gb|ADX92034.1| amino acid ABC transporter periplasmic protein [Acinetobacter baumannii TCDC-AB0715] Length = 286 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 66/249 (26%), Positives = 117/249 (46%), Gaps = 11/249 (4%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L +KK G L+ + F V + G+ +GFDV + ++ + D K++++ A Sbjct: 41 LEQVKKNGVLRVAVFADDPPFGFVDSAGNNQGFDVALAKRVTKDLLGDEKKVEFIVTEAS 100 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ-GFIMHKKKGISSVSQLSG 145 R L+S + D++ T R+ + A P Y G G + K K I+ ++QL G Sbjct: 101 NRVEFLKSNRADVVFATFTVTPERKEVVDFA-EP--YLKGAFGIVSPKAKPITDIAQLEG 157 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 ++ V GT+++ YF H K + + FER + A R DA + D + YAL Sbjct: 158 KTLIVNKGTSSDT----YFTKHYPKVNLLKFERNSDAFKALTDGRGDAISQD--STYALA 211 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQV 264 PS + I + +APA+ +G+T+ N ++ + T+ E+ I + + + Sbjct: 212 WAAKNPSYVAGIQSIGDQEFIAPAVKKGNTQLLNWLNTEIKQLRTSGEIKKIYDETLKPI 271 Query: 265 SKDTTNPDV 273 D+ NP+V Sbjct: 272 YGDSVNPNV 280 >gi|319791947|ref|YP_004153587.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] gi|315594410|gb|ADU35476.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] Length = 304 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 58/231 (25%), Positives = 106/231 (45%), Gaps = 5/231 (2%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK---IQYLPL 83 L ++ G + G V F+ + A + G+ ++ CRAL +AI D +K I+++P+ Sbjct: 38 LAKARETGAITIGYRESSVPFSYLNARKEPIGYSIELCRALVTAIEDTVNKSLTIKWVPV 97 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 + R A+ S Q+D+ +T L R+ + +F P + G ++ K I S L Sbjct: 98 TSDSRIDAVASGQVDLECGSTTNNLERQKRV--SFSPTMFVSGTKVLVKKGAPIKSFRDL 155 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 +G + V AGTT E TL D + + + V E ++ + DA+ D LY Sbjct: 156 AGKKVAVTAGTTNEKTLRDLSEKFKLGINLQVARDHAESFGLVKSGQADAFATDDVLLYG 215 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 L + +++ ++ D +S P +GD + +V+ T + E+ Sbjct: 216 LIAQDAAKADYEVVGDFLSYDPYGIMYRKGDAQLAKVVNDTFQVLAEDGEI 266 >gi|269120152|ref|YP_003308329.1| extracellular solute-binding protein family 3 [Sebaldella termitidis ATCC 33386] gi|268614030|gb|ACZ08398.1| extracellular solute-binding protein family 3 [Sebaldella termitidis ATCC 33386] Length = 283 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 68/249 (27%), Positives = 111/249 (44%), Gaps = 18/249 (7%) Query: 1 MYKDFFVSILCLIILFF----TSFSTNASILGDI---KKRGFLKCGINTGLVGFAEVKAN 53 M K F+S++ L++ + NA G+I +KRG L G+ T F + Sbjct: 1 MKKLLFLSLMVLVLFVSCGNKNTDDNNAKTSGEIEKIQKRGKLIVGVFTDKPPFGFINEK 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 + GFD+ + + + D +KI+++P+ A R LQS ++DI+ N T RE Sbjct: 61 NENDGFDIALAKQFAKDLLGDENKIEFVPVEAASRVPFLQSDKVDIIMANMTVTPDREKV 120 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + A P Q + + K I S++ L G + V GTT ++ +F + Sbjct: 121 VDFA-NPYMKVAIQ-ILGNDKDNIKSLNDLKGKKLIVNKGTTADI----FFTKNYPDIEL 174 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + F+ E A + R A D LYA TN P ++ + SP+APA+ +G Sbjct: 175 LRFDHNTEAFQALKDGRGVALAHDSLLLYAWAQTN--PGFTIVNEKLEEPSPIAPAVKKG 232 Query: 234 DT---EWYN 239 + EW N Sbjct: 233 NNELREWIN 241 >gi|169796305|ref|YP_001714098.1| amino acid ABC transporter periplasmic substrate-binding protein [Acinetobacter baumannii AYE] gi|213156959|ref|YP_002319004.1| ABC transporter, periplasmic binding protein [Acinetobacter baumannii AB0057] gi|215483764|ref|YP_002325989.1| Glutamine-binding protein precursor (GlnBP) [Acinetobacter baumannii AB307-0294] gi|294837743|ref|ZP_06782426.1| Glutamine-binding protein precursor (GlnBP) [Acinetobacter sp. 6013113] gi|294859370|ref|ZP_06797139.1| Glutamine-binding protein precursor (GlnBP) [Acinetobacter sp. 6013150] gi|301344840|ref|ZP_07225581.1| Glutamine-binding protein precursor (GlnBP) [Acinetobacter baumannii AB056] gi|301510867|ref|ZP_07236104.1| Glutamine-binding protein precursor (GlnBP) [Acinetobacter baumannii AB058] gi|301596929|ref|ZP_07241937.1| Glutamine-binding protein precursor (GlnBP) [Acinetobacter baumannii AB059] gi|169149232|emb|CAM87114.1| putative amino acid transport protein (ABC superfamily, peri_bind) [Acinetobacter baumannii AYE] gi|213056119|gb|ACJ41021.1| ABC transporter, periplasmic binding protein [Acinetobacter baumannii AB0057] gi|213987452|gb|ACJ57751.1| Glutamine-binding protein precursor (GlnBP) [Acinetobacter baumannii AB307-0294] Length = 286 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 65/249 (26%), Positives = 117/249 (46%), Gaps = 11/249 (4%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L +KK G L+ + F V + G+ +GFDV + ++ + D K++++ A Sbjct: 41 LEQVKKNGVLRVAVFADDPPFGYVDSAGNNQGFDVALAKRVTKDLLGDEKKVEFIVTEAS 100 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ-GFIMHKKKGISSVSQLSG 145 R L+S + D++ T R+ + A P Y G G + K + I+ ++QL G Sbjct: 101 NRVEFLKSNRADVVFATFTVTPERKEVVDFA-EP--YLKGAFGIVSPKARPITDIAQLEG 157 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 ++ V GT+++ YF H K + + FER + A R DA + D + YAL Sbjct: 158 KTLIVNKGTSSDT----YFTKHYPKVNLLKFERNSDAFKALTDGRGDAISQD--STYALA 211 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQV 264 PS + I + +APA+ +G+T+ N ++ + T+ E+ I + + + Sbjct: 212 WAAKNPSYVAGIQSIGDQEFIAPAVKKGNTQLLNWLNTEIKQLRTSGEIKKIYDETLKPI 271 Query: 265 SKDTTNPDV 273 D+ NP+V Sbjct: 272 YGDSVNPNV 280 >gi|256377588|ref|YP_003101248.1| extracellular solute-binding protein family 3 [Actinosynnema mirum DSM 43827] gi|255921891|gb|ACU37402.1| extracellular solute-binding protein family 3 [Actinosynnema mirum DSM 43827] Length = 319 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 53/206 (25%), Positives = 104/206 (50%), Gaps = 15/206 (7%) Query: 23 NASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + S + I +RG L G+ NT L+GF + G+ +GFDVD R ++ ++ DP+K+++ Sbjct: 75 SGSTMRRIAERGQLVVGVDQNTYLMGFRD-PFTGELQGFDVDLAREVARSLLGDPTKVRF 133 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTL--LREISLGLAFRPITYFDGQGFIMHKKKGIS 138 LN+ +R AL++ ++D++ R T R ++ ++ Y GQ ++ K G++ Sbjct: 134 RVLNSDQRLPALETGEVDVVVRTMTITCERWRRVNFSTSY----YEAGQRVLVPKDSGVT 189 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 ++ LSG +C G++ +LA + +AH P+ + + + DA + D Sbjct: 190 GLTALSGRKVCATTGSS---SLA-HVRAHPSGPVPVAVPNWTDCLVMLQQGQVDAISTDD 245 Query: 199 SALYALKLTNDRPSEHVILPDIISKS 224 + L + P V+ P + ++S Sbjct: 246 TILAGFAAQD--PYTEVVGPRLTTES 269 >gi|299770571|ref|YP_003732597.1| Glutamine-binding protein precursor (GlnBP) [Acinetobacter sp. DR1] gi|298700659|gb|ADI91224.1| Glutamine-binding protein precursor (GlnBP) [Acinetobacter sp. DR1] Length = 286 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 65/249 (26%), Positives = 117/249 (46%), Gaps = 11/249 (4%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L +KK G L+ + F V + G+ +GFDV + ++ + D K++++ A Sbjct: 41 LEQVKKNGVLRVAVFADDPPFGYVDSAGNNQGFDVALAKRVTKDLLGDEKKVEFIVTEAS 100 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ-GFIMHKKKGISSVSQLSG 145 R L+S + D++ T R+ + + P Y G G + K K I+ ++QL G Sbjct: 101 NRVEFLKSNRADVVFATFTVTPERKEVVDFS-EP--YLKGAFGIVSPKAKPITDIAQLEG 157 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 ++ V GT+++ YF H K + + FER + A R DA + D + YAL Sbjct: 158 KTLIVNKGTSSDT----YFTKHYPKVNLLKFERNSDAFKALTDGRGDAISQD--STYALA 211 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQV 264 PS + I + +APA+ +G+T+ N ++ + T+ E+ I + + + Sbjct: 212 WAAKNPSYVAGIQSIGDQEFIAPAVKKGNTQLLNWLNTEIKQLRTSGEIKKIYDETLKPI 271 Query: 265 SKDTTNPDV 273 D+ NP+V Sbjct: 272 YGDSVNPNV 280 >gi|239909117|ref|YP_002955859.1| amino acid ABC transporter substrate binding protein precursor [Desulfovibrio magneticus RS-1] gi|239798984|dbj|BAH77973.1| amino acid ABC transporter substrate binding protein precursor [Desulfovibrio magneticus RS-1] Length = 272 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 65/245 (26%), Positives = 111/245 (45%), Gaps = 14/245 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGL--VGFAEVKANGDWKG 58 M K +++L + + A L DIK RG L G+ GF + K N G Sbjct: 1 MRKAARLTVLACLFTLVAAMPALAGKLDDIKSRGTLVAGVKDSQRPFGFVDEKTN-QIVG 59 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 F++D +AL++ + +K++ P+ + R L +DI++ RE + + Sbjct: 60 FEIDLMQALATRL---NAKLELKPVTSSTRIPMLTQGAVDIVAATMTHKKEREDQVDFS- 115 Query: 119 RPITYF-DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 ITYF GQ ++ K GI SV+ L+G + G+T+E + K I FE Sbjct: 116 --ITYFMTGQKLLVKKDGGIKSVADLAGKKVGSVKGSTSEQNV----KKAQPDCTVISFE 169 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E A + + A T D S L +K ++D+P I+ + IS P + + D+++ Sbjct: 170 TYPEAFLALKQGKVQAVTTDESILVGIKNSDDKPEAWDIVGEYISPEPYGLGVAENDSDF 229 Query: 238 YNIVS 242 + V+ Sbjct: 230 RDFVN 234 >gi|258406273|ref|YP_003199015.1| extracellular solute-binding protein family 3 [Desulfohalobium retbaense DSM 5692] gi|257798500|gb|ACV69437.1| extracellular solute-binding protein family 3 [Desulfohalobium retbaense DSM 5692] Length = 273 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 12/221 (5%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 A L +IK+RG++ G+ +V F V K + GFDVD C+ L+ + D ++ P Sbjct: 24 ADKLEEIKERGYMVAGVKDAVVPFGYVDKDTNNIVGFDVDICKELADKLGVD---LRLKP 80 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF-DGQGFIMHKKKGISSVS 141 + + R L +DIL+ RE S+ + TYF GQ ++ K ISS + Sbjct: 81 VTSSTRIPMLAQGSVDILAATMTHKFSREDSIDFS---TTYFMTGQKLLVKKDSDISSTA 137 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L+G + G+T+E + K + + FE + A R + A T D + L Sbjct: 138 DLAGKKVGTAKGSTSEKNI----KEAQPESRVLSFEGYPQAFLALRQGKVKAVTTDATIL 193 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 LK + P ++ I+ + IS P + + ++ + + V+ Sbjct: 194 LGLKNSAPDPDKYAIVGEYISDEPYGLGVPENESNFRDFVN 234 >gi|300718266|ref|YP_003743069.1| polar amino acid ABC transporter, periplasmic ligand binding protein [Erwinia billingiae Eb661] gi|299064102|emb|CAX61222.1| polar amino acid ABC transporter, periplasmic ligand binding protein [Erwinia billingiae Eb661] Length = 271 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 67/238 (28%), Positives = 101/238 (42%), Gaps = 13/238 (5%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 +++ L +L T+A L DIK RG L GI + + A G GF+VD R++ Sbjct: 6 ALMALSLLIMAPVITHADTLSDIKSRGVLTVGIKNDYPPYGFMNAEGKTVGFEVDLARSI 65 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 ++ + P KI+ +P+NA R LQS QID++ T R + ++ G Sbjct: 66 AANLLGSPDKIKLVPVNASNRIQFLQSGQIDLIMATLGVTPERAKEIDFTVEYVSA-AGP 124 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 + K+ + QL G IC G+ Y K KY I + AYR Sbjct: 125 SVMARKEAKFNQWEQLKGQKICGIQGSY-------YNKTLTQKYG-IQLVNFTALPEAYR 176 Query: 188 A---HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A +RC A D L KL S++ I P+A + +GD + N V+ Sbjct: 177 ALQDNRCVAMVFDDMTLQN-KLGEPGWSDYKIAIKPYEFLPMAGGLRKGDEAFKNAVN 233 >gi|315452691|ref|YP_004072961.1| amino-acid(glutamine) ABC transporter, periplasmic glutamine-binding protein [Helicobacter felis ATCC 49179] gi|315131743|emb|CBY82371.1| amino-acid(Glutamine) ABC transporter, periplasmic glutamine-binding protein [Helicobacter felis ATCC 49179] Length = 276 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 59/222 (26%), Positives = 103/222 (46%), Gaps = 12/222 (5%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + S L IK+RG LK G+ + F + + G+++GFDV + ++ + D KI++ Sbjct: 28 QSKESGLASIKQRGVLKVGVFSDKPPFGYMDSKGEYQGFDVYIAKRMAKDLLGDEKKIEF 87 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +P+ A R L+S ++DI+ N T RE + A +P Y + K + S+ Sbjct: 88 IPVEAAARVEFLKSNKVDIIMANFTKTKEREAVVDFA-KP--YMKVALGVASKNGEVKSI 144 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L + V GTT + YF + + +++ E A + +R A D + Sbjct: 145 EDLKDKPLIVNKGTTADF----YFSKNYPNISLLKYDQNTETFLALKDNRGPALAHDNTL 200 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT---EWYN 239 L+A N P V +P + + +APA+ +G+ EW N Sbjct: 201 LFAWVKKN--PEFKVGIPSLGDQDVIAPAVKKGNKALLEWLN 240 >gi|262278742|ref|ZP_06056527.1| ArtI protein [Acinetobacter calcoaceticus RUH2202] gi|262259093|gb|EEY77826.1| ArtI protein [Acinetobacter calcoaceticus RUH2202] Length = 286 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 65/249 (26%), Positives = 117/249 (46%), Gaps = 11/249 (4%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L +KK G L+ + F V + G+ +GFDV + ++ + D K++++ A Sbjct: 41 LEQVKKNGVLRVAVFADDPPFGYVDSAGNNQGFDVALAKRVTKDLLGDEKKVEFIVTEAS 100 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ-GFIMHKKKGISSVSQLSG 145 R L+S + D++ T R+ + A P Y G G + K K I+ ++QL G Sbjct: 101 NRVEFLKSNRADVVFATFTVTPERKEVVDFA-EP--YLKGAFGIVSPKAKPITDIAQLEG 157 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 ++ V GT+++ YF H K + + FER + A R DA + D + YAL Sbjct: 158 KTLIVNKGTSSDT----YFTKHYPKVNLLKFERNSDAFKALTDGRGDAISQD--STYALA 211 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQV 264 PS + I + +APA+ +G+T+ N ++ + T+ E+ I + + + Sbjct: 212 WAAKNPSYVAGIQSIGDQEFIAPAVKKGNTQLLNWLNTEIKQLRTSGEIKKIYDETLKPI 271 Query: 265 SKDTTNPDV 273 ++ NP+V Sbjct: 272 YGESVNPNV 280 >gi|13324646|gb|AAK18828.1|AF327739_5 Peb1 [Streptococcus thermophilus] Length = 277 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 54/205 (26%), Positives = 95/205 (46%), Gaps = 15/205 (7%) Query: 7 VSILCLIILFFTSFSTNAS---------ILGDIKKRGFLKCGINTGLVGFAEVKANGD-W 56 VS++ + T+ T A + I RG L G+ + F A + + Sbjct: 13 VSLVIATVFLITNHKTEAEDTSKLLDSKTVQKIVNRGTLNVGVKQDVPNFGYYSAKTNRY 72 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +G +VD + ++ + K+ Y+P+ + R + + ID+L +T+ E Sbjct: 73 EGMEVDLAKKIADEL---RVKVNYIPVTTQTREPLMDNGTIDLLIGT--YTINDERKASY 127 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 A Y D GF++ K GI+ +S L+G +I V G +T+ L +Y AHN+K++ + Sbjct: 128 AISNPYYRDQIGFLVLKDSGINKISDLNGKTIGVAQGASTKAALQEYSSAHNLKFNYVQL 187 Query: 177 ERVEEIDAAYRAHRCDAYTGDISAL 201 E+ + AHR DA++ D S L Sbjct: 188 GSYPELAVSLYAHRVDAFSVDKSIL 212 >gi|256847116|ref|ZP_05552562.1| ABC transporter solute-binding component [Lactobacillus coleohominis 101-4-CHN] gi|256715780|gb|EEU30755.1| ABC transporter solute-binding component [Lactobacillus coleohominis 101-4-CHN] Length = 284 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 66/225 (29%), Positives = 103/225 (45%), Gaps = 14/225 (6%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 ++N S + IKKRG LK + L + V +G G+DV R ++ D K+++ Sbjct: 35 ASNPSSVSAIKKRGVLKVAVFGDLPPYGWVNKDGKRVGYDVALARQMAK---DLGVKVKF 91 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + +NA R L S + DI+ N T R+ + A +P G + KKK I+ V Sbjct: 92 VQVNANNRVDTLNSNKADIVLANFTVTSERKQVVDFA-KPYMKV-SVGVVSPKKKAITKV 149 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 SQL G + V GTT E +YF + + F+ + A + +R A D S Sbjct: 150 SQLKGKKVIVTKGTTAE----NYFTSKQKGVSLLKFDSKTQQFNALKNNRGAALADDNSY 205 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 LYA + P V + I K +APA+ +G+ N W++ Sbjct: 206 LYA--WVKNNPKYTVGIKSIGPKQYIAPAVKKGNKSLLN---WSN 245 >gi|78356474|ref|YP_387923.1| extracellular solute-binding protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78218879|gb|ABB38228.1| amino acid ABC transporter substrate-binding protein, PAAT family [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 271 Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 59/230 (25%), Positives = 106/230 (46%), Gaps = 12/230 (5%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFD 73 + F++ + +A + +IK RG L G+ +V F V N GFDVD CR ++ + Sbjct: 13 MIFSAATASAGKIEEIKDRGVLVAGVKDSVVPFGFVDENSKQLVGFDVDICRYIAGQL-- 70 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF-DGQGFIMH 132 +++ + + R + +DI + R+ + + ITYF DGQ ++ Sbjct: 71 -GVELELKTVTSATRIPMVTQGSVDIAAATMTHKHERDNVIDFS---ITYFMDGQKILVA 126 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 K GI+SV+ L G + G+T+E + KA + F+ + A + + Sbjct: 127 KDSGINSVADLKGKKVATVKGSTSEKNI----KAAQPDCRVLSFDEYPQAMLALKQGKAS 182 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A T D + L LK ++ P + VI D IS P + + D+++ + V+ Sbjct: 183 AVTTDSTILLGLKNSDPEPEKWVIAGDYISAEPYGLGLPENDSDFRDFVN 232 >gi|323697540|ref|ZP_08109452.1| extracellular solute-binding protein family 3 [Desulfovibrio sp. ND132] gi|323457472|gb|EGB13337.1| extracellular solute-binding protein family 3 [Desulfovibrio desulfuricans ND132] Length = 268 Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 12/218 (5%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L D+K +G L CG+ + F V N + GFDVD C+ ++ I K ++ + + Sbjct: 26 LEDVKAKGVLVCGVKDSVNLFGFVDPNTKELVGFDVDICKYIADKI---GVKTEFKVVTS 82 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF-DGQGFIMHKKKGISSVSQLS 144 K R L +D+L+ R+ + + ITYF DGQ ++ K GI+S + L+ Sbjct: 83 KNRIPMLAQGSVDMLAATMTHKFSRDEQIDFS---ITYFMDGQKLLVEKGSGITSTADLA 139 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 + G+T+E + KA I ++ + A + + A T D L L Sbjct: 140 NKKVGTVKGSTSEKNI----KAAQPAAQVISYDEYPQAFMALKQGKVKAVTTDSGILAGL 195 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 K +D P + I+ S P + Q D+E+ + V+ Sbjct: 196 KAGDDNPEKWEIVGAFFSSEPYGLGVPQNDSEFRDFVN 233 >gi|118465451|ref|YP_883877.1| extracellular solute-binding protein, family protein 3 [Mycobacterium avium 104] gi|118166738|gb|ABK67635.1| Bacterial extracellular solute-binding protein, family protein 3 [Mycobacterium avium 104] Length = 334 Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 62/221 (28%), Positives = 99/221 (44%), Gaps = 20/221 (9%) Query: 11 CLIILFFTSFSTNA---SILGDIKKRGFLKCGINTG--LVGFAEVKANGDWKGFDVDFCR 65 C + F T A + + DI+ RG L G++ G L F + G+ GFDVD Sbjct: 72 CDLTASLRPFPTKAEADAAVADIRARGRLIVGLDIGSNLFSFRD-PITGEITGFDVDIAG 130 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ IF PS ++Y L++ ER ALQ ++D++ + T R + + Y D Sbjct: 131 EIARDIFGAPSHVEYRILSSDERVTALQRGEVDVVVKTMTITCDRRKQVNFS---TVYLD 187 Query: 126 G-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 Q + + I+ VS LSG +CV GTT+ + + PIV V D Sbjct: 188 ANQRILAPRDSPITKVSDLSGKRVCVAKGTTS------LHRIRQIDPPPIVVSVVNWADC 241 Query: 185 --AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 A + DA + D S L L + P H++ P++ ++ Sbjct: 242 LVAMQQREIDAVSTDDSILAG--LVEEDPYLHIVGPNMATQ 280 >gi|312278469|gb|ADQ63126.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus thermophilus ND03] Length = 277 Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 51/185 (27%), Positives = 90/185 (48%), Gaps = 6/185 (3%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPS 76 TS ++ + I RG L G+ + F A + ++G +VD + ++ + Sbjct: 33 TSKLLDSKAVQKIVNRGTLNVGVKQDVPNFGYYSAKTNRYEGMEVDLAKKIADEL---KV 89 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 K+ Y+P+ + R + + ID+L +T+ E A Y D GF++ K G Sbjct: 90 KVNYIPVTTQTREPLMDNGTIDLLIGT--YTINDERKASYAISNPYYHDQIGFLVLKDSG 147 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 I+ +S L+G +I V G +T+ L +Y AHN+K++ + E+ + AHR DA++ Sbjct: 148 INKISDLNGKTIGVAQGASTKAALQEYASAHNLKFNYVQLGSYPELAVSLYAHRVDAFSV 207 Query: 197 DISAL 201 D S L Sbjct: 208 DKSIL 212 >gi|55821171|ref|YP_139613.1| polar amino acid ABC uptake transporter substrate binding protein [Streptococcus thermophilus LMG 18311] gi|55737156|gb|AAV60798.1| polar amino acid ABC uptake transporter substrate binding protein [Streptococcus thermophilus LMG 18311] Length = 277 Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 57/205 (27%), Positives = 97/205 (47%), Gaps = 15/205 (7%) Query: 7 VSILCLIILFFTSFSTNA---SILGDIK------KRGFLKCGINTGLVGFAEVKANGD-W 56 VS++ + T+ T A S L D K RG L G+ + F A + + Sbjct: 13 VSLVIATVFLITNHKTEAEDTSKLLDSKAVQKIVNRGTLNVGVKQDVPNFGYYSAKTNRY 72 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +G +VD + ++ + K+ Y+P+ + R + + ID+L +T+ E Sbjct: 73 EGMEVDLAKKIADEL---RVKVNYIPVTTQTREPLMDNGTIDLLIGT--YTINDERKASY 127 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 A Y D GF++ K GI+ +S L+G +I V G +T+ L +Y AHN+K++ + Sbjct: 128 AISNPYYRDQIGFLVLKDSGINKISDLNGKTIGVAQGASTKAALQEYSSAHNLKFNYVQL 187 Query: 177 ERVEEIDAAYRAHRCDAYTGDISAL 201 E+ + AHR DA++ D S L Sbjct: 188 GSYPELAVSLYAHRVDAFSVDKSIL 212 >gi|55823084|ref|YP_141525.1| amino acid (glutamine) ABC transporter substrate-binding protein [Streptococcus thermophilus CNRZ1066] gi|55739069|gb|AAV62710.1| amino acid (glutamine) ABC transporter substrate-binding protein [Streptococcus thermophilus CNRZ1066] Length = 277 Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 57/205 (27%), Positives = 97/205 (47%), Gaps = 15/205 (7%) Query: 7 VSILCLIILFFTSFSTNA---SILGDIK------KRGFLKCGINTGLVGFAEVKANGD-W 56 VS++ + T+ T A S L D K RG L G+ + F A + + Sbjct: 13 VSLVIATVFLITNHKTEAEDTSKLLDSKAVQKIVNRGTLNVGVKQDVPNFGYYSAKTNRY 72 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +G +VD + ++ + K+ Y+P+ + R + + ID+L +T+ E Sbjct: 73 EGMEVDLAKKIADEL---RVKVNYIPVTTQTREPLMDNGTIDLLIGT--YTINDERKASY 127 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 A Y D GF++ K GI+ +S L+G +I V G +T+ L +Y AHN+K++ + Sbjct: 128 AISNPYYRDQIGFLVLKDSGINKISDLNGKTIGVAQGASTKAALQEYASAHNLKFNYVQL 187 Query: 177 ERVEEIDAAYRAHRCDAYTGDISAL 201 E+ + AHR DA++ D S L Sbjct: 188 GSYPELAVSLYAHRVDAFSVDKSIL 212 >gi|41409992|ref|NP_962828.1| GlnH [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398825|gb|AAS06444.1| GlnH [Mycobacterium avium subsp. paratuberculosis K-10] Length = 309 Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 62/221 (28%), Positives = 99/221 (44%), Gaps = 20/221 (9%) Query: 11 CLIILFFTSFSTNA---SILGDIKKRGFLKCGINTG--LVGFAEVKANGDWKGFDVDFCR 65 C + F T A + + DI+ RG L G++ G L F + G+ GFDVD Sbjct: 47 CDLTASLRPFPTKAEADAAVADIRARGRLIVGLDIGSNLFSFRD-PITGEITGFDVDIAG 105 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ IF PS ++Y L++ ER ALQ ++D++ + T R + + Y D Sbjct: 106 EIARDIFGAPSHVEYRILSSDERVTALQRGEVDVVVKTMTITCDRRKQVNFS---TVYLD 162 Query: 126 G-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 Q + + I+ VS LSG +CV GTT+ + + PIV V D Sbjct: 163 ANQRILAPRDSPITKVSDLSGKRVCVAKGTTS------LHRIRQIDPPPIVVSVVNWADC 216 Query: 185 --AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 A + DA + D S L L + P H++ P++ ++ Sbjct: 217 LVAMQQREIDAVSTDDSILAG--LVEEDPYLHIVGPNMATQ 255 >gi|254777189|ref|ZP_05218705.1| extracellular solute-binding protein, family protein 3 [Mycobacterium avium subsp. avium ATCC 25291] Length = 326 Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 62/221 (28%), Positives = 99/221 (44%), Gaps = 20/221 (9%) Query: 11 CLIILFFTSFSTNA---SILGDIKKRGFLKCGINTG--LVGFAEVKANGDWKGFDVDFCR 65 C + F T A + + DI+ RG L G++ G L F + G+ GFDVD Sbjct: 64 CDLTASLRPFPTKAEADAAVADIRARGRLIVGLDIGSNLFSFRD-PITGEITGFDVDIAG 122 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ IF PS ++Y L++ ER ALQ ++D++ + T R + + Y D Sbjct: 123 EIARDIFGAPSHVEYRILSSDERVTALQRGEVDVVVKTMTITCDRRKQVNFS---TVYLD 179 Query: 126 G-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 Q + + I+ VS LSG +CV GTT+ + + PIV V D Sbjct: 180 ANQRILAPRDSPITKVSDLSGKRVCVAKGTTS------LHRIRQIDPPPIVVSVVNWADC 233 Query: 185 --AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 A + DA + D S L L + P H++ P++ ++ Sbjct: 234 LVAMQQREIDAVSTDDSILAG--LVEEDPYLHIVGPNMATQ 272 >gi|116627888|ref|YP_820507.1| amino acid ABC transporter periplasmic protein [Streptococcus thermophilus LMD-9] gi|116101165|gb|ABJ66311.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus thermophilus LMD-9] Length = 277 Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 51/185 (27%), Positives = 90/185 (48%), Gaps = 6/185 (3%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPS 76 TS ++ + I RG L G+ + F A + ++G +VD + ++ + Sbjct: 33 TSKLLDSKAVQKIVNRGTLNVGVKQDVPNFGYYSAKTNRYEGMEVDLAKKIADEL---KV 89 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 K+ Y+P+ + R + + ID+L +T+ E A Y D GF++ K G Sbjct: 90 KVNYIPVTTQTREPLMDNGTIDLLIGT--YTINDERKASYAISNPYYHDQIGFLVLKDSG 147 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 I+ +S L+G +I V G +T+ L +Y AHN+K++ + E+ + AHR DA++ Sbjct: 148 INKISDLNGKTIGVAQGASTKAALQEYASAHNLKFNYVQLGSYPELAVSLYAHRVDAFSV 207 Query: 197 DISAL 201 D S L Sbjct: 208 DKSIL 212 >gi|57242093|ref|ZP_00370033.1| amino acid ABC transporter, amino acid-binding protein [Campylobacter upsaliensis RM3195] gi|57017285|gb|EAL54066.1| amino acid ABC transporter, amino acid-binding protein [Campylobacter upsaliensis RM3195] Length = 257 Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 62/200 (31%), Positives = 94/200 (47%), Gaps = 8/200 (4%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 S NA L DIK +G L G+ + +A + + G+ KGF+VD + L+ I D +KI+ Sbjct: 23 SANAGKLEDIKAKGTLVVGVKNDVPHYALLDQKTGEIKGFEVDVAKKLAKEILGDENKIK 82 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 + +NAK R L + +D++ +T+ E F Y D G ++ K+KG S Sbjct: 83 LVAVNAKTRGPLLDNGTLDVVIAT--FTITPERKKIYNFSQPYYQDAIGLLVLKEKGYKS 140 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 ++ + GA I V TT+ + + K + F I AA A R D ++ D S Sbjct: 141 LADMKGAKIGVAQAATTKRVIGEAAKKAGVSVSFSEFPDYPSIKAALDAKRVDVFSVDKS 200 Query: 200 ALYALKLTNDRPSEHVILPD 219 L D SE ILPD Sbjct: 201 ILLGY---VDEKSE--ILPD 215 >gi|315638192|ref|ZP_07893374.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Campylobacter upsaliensis JV21] gi|315481728|gb|EFU72350.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Campylobacter upsaliensis JV21] Length = 262 Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 62/200 (31%), Positives = 94/200 (47%), Gaps = 8/200 (4%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 S NA L DIK +G L G+ + +A + + G+ KGF+VD + L+ I D +KI+ Sbjct: 28 SANAGKLEDIKAKGTLVVGVKNDVPHYALLDQKTGEIKGFEVDVAKKLAKEILGDENKIK 87 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 + +NAK R L + +D++ +T+ E F Y D G ++ K+KG S Sbjct: 88 LVAVNAKTRGPLLDNGTLDVVIAT--FTITPERKKIYNFSQPYYQDAIGLLVLKEKGYKS 145 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 ++ + GA I V TT+ + + K + F I AA A R D ++ D S Sbjct: 146 LADMKGAKIGVAQAATTKRVIGEAAKKAGVSVSFSEFPDYPSIKAALDAKRVDVFSVDKS 205 Query: 200 ALYALKLTNDRPSEHVILPD 219 L D SE ILPD Sbjct: 206 ILLGY---VDEKSE--ILPD 220 >gi|288905749|ref|YP_003430971.1| ABC transporter, amino acid binding protein [Streptococcus gallolyticus UCN34] gi|306831847|ref|ZP_07465003.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|288732475|emb|CBI14047.1| Putative ABC transporter, amino acid binding protein [Streptococcus gallolyticus UCN34] gi|304426045|gb|EFM29161.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 272 Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 49/173 (28%), Positives = 87/173 (50%), Gaps = 6/173 (3%) Query: 30 IKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 I+ G LK G+ + F A G ++G +VD + ++ + K+ + + A+ R Sbjct: 40 IQDAGVLKVGVKQDVPNFGYYSAETGKYEGMEVDLAKKIAKKL---GVKVSFTAVTAQTR 96 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 L + QIDIL +T+ E A Y+D GF+++K KG S++ L G +I Sbjct: 97 EALLDNGQIDILIAT--YTITEERQASYAISDPYYYDEIGFLVNKSKGYDSIADLDGLTI 154 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 V G+TT+ + +Y +AHN+ ++ + E+ + A+R A++ D S L Sbjct: 155 GVAQGSTTKSAIEEYGEAHNLSFNFVQLGSYPELAISLYANRISAFSVDKSIL 207 >gi|118618243|ref|YP_906575.1| glutamine-binding lipoprotein GlnH [Mycobacterium ulcerans Agy99] gi|183980737|ref|YP_001849028.1| glutamine-binding lipoprotein GlnH [Mycobacterium marinum M] gi|118570353|gb|ABL05104.1| glutamine-binding lipoprotein GlnH [Mycobacterium ulcerans Agy99] gi|183174063|gb|ACC39173.1| glutamine-binding lipoprotein GlnH [Mycobacterium marinum M] Length = 328 Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 18/213 (8%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTG--LVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 F T +A++ DI+ RG L G++ G L F + G+ GFDVD ++ IF Sbjct: 75 FPTKAEADAAV-ADIRARGRLIVGLDIGSNLFSFRD-PITGEITGFDVDIASEVARDIFG 132 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG-QGFIMH 132 P+ ++Y L+A ER ALQS Q+D++ + T R + + Y D Q + Sbjct: 133 GPTHVEYRILSAAERITALQSSQVDVVVKTMTITCERRKLVNFS---TVYLDANQRILTS 189 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA--AYRAHR 190 + I VS LSG +CV GTT+ + + P++ V D A + Sbjct: 190 RDSPIFKVSDLSGKRVCVARGTTS------LRRIREIAPPPVIVSVVNWADCLVALQQRE 243 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 DA + D + L L + P H++ P++ ++ Sbjct: 244 IDAVSTDDTILAG--LVEEDPYLHIVGPNMANQ 274 >gi|325978782|ref|YP_004288498.1| putative glutamine transport system substrate-binding protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325178710|emb|CBZ48754.1| putative glutamine transport system substrate-binding protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 270 Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 49/173 (28%), Positives = 87/173 (50%), Gaps = 6/173 (3%) Query: 30 IKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 I+ G LK G+ + F A G ++G +VD + ++ + K+ + + A+ R Sbjct: 38 IQDAGVLKVGVKQDVPNFGYYSAETGKYEGMEVDLAKKIAKKL---GVKVSFTAVTAQTR 94 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 L + QIDIL +T+ E A Y+D GF+++K KG S++ L G +I Sbjct: 95 EALLDNGQIDILIAT--YTITEERQASYAISDPYYYDEIGFLVNKSKGYDSIADLDGLTI 152 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 V G+TT+ + +Y +AHN+ ++ + E+ + A+R A++ D S L Sbjct: 153 GVAQGSTTKSAIEEYGEAHNLSFNFVQLGSYPELAISLYANRISAFSVDKSIL 205 >gi|51891628|ref|YP_074319.1| amino acid ABC transporter substrate-binding protein [Symbiobacterium thermophilum IAM 14863] gi|51855317|dbj|BAD39475.1| amino acid ABC transporter substrate-binding protein [Symbiobacterium thermophilum IAM 14863] Length = 275 Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 62/226 (27%), Positives = 99/226 (43%), Gaps = 8/226 (3%) Query: 30 IKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 I+ G L+ G+ + F A +G ++D R ++ IF D SK+Q+ +NAK R Sbjct: 47 IRDAGVLRVGVKEDVPKFGYFDPAKNAHEGLEIDLARRIAKEIFGDESKVQFTGVNAKTR 106 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 AL + +ID++ +T+ E F + D GF++ GI S L G I Sbjct: 107 GPALDNGEIDLVIAT--FTITEERKKSWNFSDPYFTDYVGFLVLADSGIQSWKDLDGKVI 164 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 V +T L + + +K + F EI AA + R DA++ D S L+ K Sbjct: 165 GVAQSASTRAALTEQAEKDGIKVEFMEFATYPEIKAALDSRRIDAFSVDQSILWGYK--- 221 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 ++V+LPD + A +TE V+ M + EL Sbjct: 222 --DDKNVMLPDKFAPQEYGIATKLSNTELAEFVNNILKGMKESGEL 265 >gi|57504979|ref|ZP_00370931.1| amino acid ABC transporter, amino acid-binding protein [Campylobacter coli RM2228] gi|57019251|gb|EAL55957.1| amino acid ABC transporter, amino acid-binding protein [Campylobacter coli RM2228] Length = 241 Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 61/206 (29%), Positives = 98/206 (47%), Gaps = 8/206 (3%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFD 73 + FTS + L IK +G L G+ + +A + +A G+ KGF+VD + L+ +I Sbjct: 1 MAFTSANAAEGKLEAIKAKGELVIGVKNDVPHYALLDQATGEIKGFEVDVAKMLAKSILG 60 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 D +K++ + +NAK R L + +D + +T+ E F Y D G ++ K Sbjct: 61 DENKVKLIAVNAKTRGPLLDNGSVDAVIAT--FTITPERKRVYNFSEPYYQDAVGLLVLK 118 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 +K S++ ++GA+I V TT+ + K +K F I AA A R DA Sbjct: 119 EKNYKSLADMNGATIGVAQAATTKKVINTAAKKIGVKVKFSEFPDYPSIKAALDAKRIDA 178 Query: 194 YTGDISALYALKLTNDRPSEHVILPD 219 ++ D S L K N+ ILPD Sbjct: 179 FSVDKSILLGYKDENNE-----ILPD 199 >gi|312111273|ref|YP_003989589.1| extracellular solute-binding protein family 3 [Geobacillus sp. Y4.1MC1] gi|311216374|gb|ADP74978.1| extracellular solute-binding protein family 3 [Geobacillus sp. Y4.1MC1] Length = 284 Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 60/227 (26%), Positives = 107/227 (47%), Gaps = 11/227 (4%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPS 76 T S+ + L IKKRG L G+ L F + G+ +GFD+D + L+ I D + Sbjct: 41 TKTSSETNTLEKIKKRGKLVVGVKYDLNLFGLKNPETGEVEGFDIDIAKGLAKKILGDEN 100 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 KI+ + +K R L + +ID + T+ E + F + + GQ ++ K Sbjct: 101 KIELKEVTSKTRIPMLNNGEIDAIIAT--MTITEERKKEVDFSDVYFMAGQSLLVKKDSK 158 Query: 137 ISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I+SV L G ++ G+T+ A + + + + FE E A +A + DA T Sbjct: 159 INSVKDLKKGMTVLTAKGSTS----AQNIRKAAPQVNVLEFENYAEAFTALKAGQGDALT 214 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 D + L L + P+ + +L + ++ P A+ +GDTE+ +++ Sbjct: 215 TDNALL--LGMAKQDPN-YRVLDETFTEEPYGIAVRKGDTEFLQVIN 258 >gi|295400877|ref|ZP_06810853.1| extracellular solute-binding protein family 3 [Geobacillus thermoglucosidasius C56-YS93] gi|294977140|gb|EFG52742.1| extracellular solute-binding protein family 3 [Geobacillus thermoglucosidasius C56-YS93] Length = 284 Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 60/227 (26%), Positives = 107/227 (47%), Gaps = 11/227 (4%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPS 76 T S+ + L IKKRG L G+ L F + G+ +GFD+D + L+ I D + Sbjct: 41 TKTSSETNTLEKIKKRGKLVVGVKYDLNLFGLKNPETGEVEGFDIDIAKGLAKKILGDEN 100 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 KI+ + +K R L + +ID + T+ E + F + + GQ ++ K Sbjct: 101 KIELKEVTSKTRIPMLNNGEIDAIIAT--MTITEERKKEVDFSDVYFMAGQSLLVKKDSK 158 Query: 137 ISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I+SV L G ++ G+T+ A + + + + FE E A +A + DA T Sbjct: 159 INSVKDLKKGMTVLTAKGSTS----AQNIRKAAPQVNVLEFENYAEAFTALKAGQGDALT 214 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 D + L L + P+ + +L + ++ P A+ +GDTE+ +++ Sbjct: 215 TDNALL--LGMAKQDPN-YRVLDETFTEEPYGIAVRKGDTEFLQVIN 258 >gi|306833969|ref|ZP_07467093.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus bovis ATCC 700338] gi|304423970|gb|EFM27112.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus bovis ATCC 700338] Length = 281 Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 49/173 (28%), Positives = 87/173 (50%), Gaps = 6/173 (3%) Query: 30 IKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 I+ G LK G+ + F A G ++G +VD + ++ + K+ + + A+ R Sbjct: 49 IQDAGVLKVGVKQDVPNFGYYSAETGKYEGMEVDLAKKIAKKL---GVKVSFTAVTAQTR 105 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 L + QIDIL +T+ E A Y+D GF+++K KG S++ L G +I Sbjct: 106 EALLDNGQIDILIAT--YTITEERQASYAISNPYYYDEIGFLVNKSKGYDSIADLDGLTI 163 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 V G+TT+ + +Y +AHN+ ++ + E+ + A+R A++ D S L Sbjct: 164 GVAQGSTTKSAIEEYGEAHNLSFNFVQLGSYPELAISLYANRISAFSVDKSIL 216 >gi|322378591|ref|ZP_08053031.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter suis HS1] gi|322380679|ref|ZP_08054824.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter suis HS5] gi|321146889|gb|EFX41644.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter suis HS5] gi|321148999|gb|EFX43459.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter suis HS1] Length = 278 Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 60/211 (28%), Positives = 105/211 (49%), Gaps = 13/211 (6%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L IK+RG L+ G+ + F V + G ++GFDV + ++ + D KIQ++P+ A Sbjct: 33 LSAIKERGILRVGVFSDKPPFGFVDSKGQYQGFDVYIAKRMAKDLLGDAKKIQFIPVEAA 92 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 R L++ ++D++ N T RE + A +P Y ++ K I SV+ L Sbjct: 93 ARVEFLKANKVDVIMANFTKTREREAVVDFA-KP--YMKVALGVVSKGGVIKSVADLKSK 149 Query: 147 S--ICVQAGTTTELTLADYFKAHNMKY-HPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 + + V GTT AD++ + N Y H + +++ E A + +R A D + L+A Sbjct: 150 NQPLIVNKGTT-----ADFYFSRNYPYIHLLKYDQNTETFLALKNNRGIALAHDNTLLFA 204 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 N P V +P++ + +APA+ +GD Sbjct: 205 WVKQN--PEFKVGIPNLGEQDVIAPAVKKGD 233 >gi|149204302|ref|ZP_01881269.1| glutamate/aspartate ABC transporter, periplasmic substrate-binding protein [Roseovarius sp. TM1035] gi|149142187|gb|EDM30234.1| glutamate/aspartate ABC transporter, periplasmic substrate-binding protein [Roseovarius sp. TM1035] Length = 291 Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 57/226 (25%), Positives = 98/226 (43%), Gaps = 6/226 (2%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK---IQYLPL 83 L I G + G V F+ + +G+ +D C + + K ++Y+P+ Sbjct: 33 LAKINDSGEIVIGHRESSVPFSYLNDQQQPEGYSIDLCMKVVEEVEKTLGKDIEVRYVPV 92 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 N K R + + ID+ +T L R+ + + P+T+ G + K GISSV+ L Sbjct: 93 NPKTRIALMANGTIDLECGSTTNNLTRQQQV--EYLPVTFVTGTKILTRKDSGISSVADL 150 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 G SI + GTT E + +A ++ + E + R DAY+ D L+ Sbjct: 151 DGKSIALAQGTTNERAVKAAVEAQGLEVKILPVRDHAEGMLSLETDRVDAYSTDHILLFG 210 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 L + P E ++ D +S P A +++ D + +V T A V Sbjct: 211 LIAKSKTPDEFAVVGDFLSFDPYA-LMVRRDDSAFELVGKTALANV 255 >gi|305432021|ref|ZP_07401188.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Campylobacter coli JV20] gi|304445105|gb|EFM37751.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Campylobacter coli JV20] Length = 259 Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 61/204 (29%), Positives = 97/204 (47%), Gaps = 8/204 (3%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDP 75 FTS + L IK +G L G+ + +A + +A G+ KGF+VD + L+ +I D Sbjct: 21 FTSANAAEGKLEAIKAKGELVIGVKNDVPHYALLDQATGEIKGFEVDVAKMLAKSILGDE 80 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 +K++ + +NAK R L + +D + +T+ E F Y D G ++ K+K Sbjct: 81 NKVKLIAVNAKTRGPLLDNGSVDAVIAT--FTITPERKRVYNFSEPYYQDAVGLLVLKEK 138 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 S++ ++GA+I V TT+ + K +K F I AA A R DA++ Sbjct: 139 NYKSLADMNGATIGVAQAATTKKVINTAAKKIGVKVKFSEFPDYPSIKAALDAKRIDAFS 198 Query: 196 GDISALYALKLTNDRPSEHVILPD 219 D S L K N+ ILPD Sbjct: 199 VDKSILLGYKDENNE-----ILPD 217 >gi|237665766|ref|ZP_04525754.1| extracellular solute-binding protein, family 3 [Clostridium butyricum E4 str. BoNT E BL5262] gi|237658713|gb|EEP56265.1| extracellular solute-binding protein, family 3 [Clostridium butyricum E4 str. BoNT E BL5262] Length = 286 Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 60/226 (26%), Positives = 106/226 (46%), Gaps = 15/226 (6%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 S N S + IK+RG +K G+ + F V +NG+ +GFDV + + + D SK Sbjct: 31 SGQENKSSIEAIKQRGTIKIGVFSDKAPFGYVDSNGENQGFDVYIAKRFAKDLLGDESKA 90 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA--FRPITYFDGQGFIMHKKKG 136 +++ ++A R L+S ++D++ N T R+ + A + ++ G + + Sbjct: 91 EFVLVDAASRVAYLESNKVDMIMANFTVTDDRKEKVDFANPYMKVSL----GIVSPESAP 146 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 I S +L G I V GTT E + + + + + +E+ EI A + R D Sbjct: 147 IKSADELKGKKIIVAKGTTAETFMTENYPDVEL----VKYEQYSEIFQALKDGRGDGILS 202 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT---EWYN 239 D + + A D P V + + S+ +APA+ +G+T EW N Sbjct: 203 DNTEVIA--WAKDNPGFTVGVSTLGSQDTIAPAVAKGNTELQEWIN 246 >gi|170748665|ref|YP_001754925.1| extracellular solute-binding protein [Methylobacterium radiotolerans JCM 2831] gi|170655187|gb|ACB24242.1| extracellular solute-binding protein family 3 [Methylobacterium radiotolerans JCM 2831] Length = 301 Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 60/237 (25%), Positives = 104/237 (43%), Gaps = 11/237 (4%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKA---NGDWK--GFDVDFCRALS---SAIFDDPSKI 78 L + +RG + G V F+ V+ +G + G+ +D C ++ A P KI Sbjct: 28 LRSVAERGEIVLGYRESSVPFSFVEGKQPDGSPRPIGYAIDLCGEIADDVQAAIGRPVKI 87 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 +Y P+ A+ R A+ S +ID+ +T R + AF P+ Y ++ + GI+ Sbjct: 88 RYAPVTAETRIEAVTSGKIDLECGSTTANAERRKQV--AFSPVDYISATQLLVRRGSGIA 145 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 S L G ++ V AGTT E + D + + A +A + DA+ D Sbjct: 146 SYRDLGGRTVVVTAGTTNEKAVRDQLARLKINAQVVTAPDHAASYAMVKAGKADAFATDD 205 Query: 199 SALYALKLTNDRP-SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 LY L T+ + +++ +LPD +S P + D+E +V T + + L Sbjct: 206 VLLYGLIATDAKDGADYTVLPDKLSYEPYGIMFRKDDSELAGLVQQTFTRLAESRAL 262 >gi|88801185|ref|ZP_01116728.1| general L-amino ABC transporter binding protein [Reinekea sp. MED297] gi|88776088|gb|EAR07320.1| general L-amino ABC transporter binding protein [Reinekea sp. MED297] Length = 94 Score = 75.5 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 28/64 (43%), Positives = 45/64 (70%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 +L + ++GF++CG++ GL GF+ NG+W G DVD+CRA+++AIF D ++Y PL Sbjct: 31 GEVLDGVLEKGFVQCGVSQGLPGFSSTDENGNWSGLDVDYCRAVAAAIFGDADAVKYTPL 90 Query: 84 NAKE 87 +A E Sbjct: 91 SASE 94 >gi|85704883|ref|ZP_01035984.1| glutamate/aspartate ABC transporter, periplasmic substrate-binding protein [Roseovarius sp. 217] gi|85670701|gb|EAQ25561.1| glutamate/aspartate ABC transporter, periplasmic substrate-binding protein [Roseovarius sp. 217] Length = 291 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 56/226 (24%), Positives = 98/226 (43%), Gaps = 6/226 (2%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK---IQYLPL 83 L I G + G V F+ + +G+ +D C + + K ++Y+P+ Sbjct: 33 LAKINDSGEIVLGHRESSVPFSYLNDQQQPEGYSIDLCMKVVEEVEKTLGKDIEVRYVPV 92 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 N K R + + ID+ +T L R+ + + P+T+ G + K+ GI+SV+ L Sbjct: 93 NPKTRIALMANGTIDLECGSTTNNLTRQQQV--EYLPVTFVTGTKILTRKESGITSVADL 150 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 G SI + GTT E + +A + + E + R DAY+ D L+ Sbjct: 151 DGKSIALAQGTTNERAIKAVVEAQGLDVKILPVRDHAEGMLSLETDRVDAYSTDHILLHG 210 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 L + P E ++ D +S P A +++ D + +V T A V Sbjct: 211 LIAKSKTPDEFAVVGDFLSFDPYA-LMVRRDDSAFELVGKTALANV 255 >gi|257459775|ref|ZP_05624884.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] gi|257443200|gb|EEV18334.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] Length = 269 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 59/241 (24%), Positives = 115/241 (47%), Gaps = 12/241 (4%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 L I+F A L I+ G +K G+ G F++ K+ G+++GF+++ A++ Sbjct: 3 LLFCIIFTLCSGVFAGSLEQIRSAGVVKIGVRDGRPPFSDEKS-GNFEGFEINLADAIAK 61 Query: 70 AIFDDP-SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD-GQ 127 +IF D +++++PLNA +R ALQ+ ++D+ T R+ + ++ YF Sbjct: 62 SIFGDKRGRVEFVPLNASDRISALQNDKVDLAVATITITQDRKRQIDFSY---PYFSMSL 118 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 G + K GI S+ LS + V+ TT K HN+ + I E + + + Sbjct: 119 GVLTRKSDGIKSIDDLSNKKVLVEGNGTTAENFLYKNKIHNLIHCSITTECYDML----K 174 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 + DAY D + A + +D + V + ++ + L + +G+TE ++++ A Sbjct: 175 QGKADAYVNDNLIVLAYSIIDD--NLEVAIQNLGNPEFLGIGVRKGNTELLDLINKELVA 232 Query: 248 M 248 + Sbjct: 233 L 233 >gi|322516686|ref|ZP_08069597.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus vestibularis ATCC 49124] gi|322124787|gb|EFX96220.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus vestibularis ATCC 49124] Length = 224 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 20/210 (9%) Query: 6 FVSILCLIIL---FFTSFSTNAS---------ILGDIKKRGFLKCGINTGL--VGFAEVK 51 ++++ CL I+ +S T A + I KRG L G+ + G+ K Sbjct: 9 YLTVACLAIVTIFLISSHKTKAEDTSKLLDSKAVQKIVKRGTLNVGVKQDVPNFGYYSAK 68 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 N ++G +VD + ++ + K+ Y+P+ + R + + ID+L +T+ E Sbjct: 69 TNS-YEGMEVDLAKKIADEL---KVKVNYIPVTTQTREPLMDNGTIDLLIGT--YTINDE 122 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 A Y D GF++ K I+ +S L+G +I V G +T+ L +Y AHN+K+ Sbjct: 123 RKASYAISDPYYHDQIGFLVLKNSDINKISDLNGKTIGVSQGASTKAALQEYASAHNLKF 182 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 + + E+ + AHR +A++ D S L Sbjct: 183 NYVQLGSFPELAVSLYAHRVNAFSVDKSIL 212 >gi|307704349|ref|ZP_07641266.1| ABC transporter substrate-binding protein [Streptococcus mitis SK597] gi|307622109|gb|EFO01129.1| ABC transporter substrate-binding protein [Streptococcus mitis SK597] Length = 264 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 57/205 (27%), Positives = 99/205 (48%), Gaps = 10/205 (4%) Query: 1 MYKDFFVSILCLIILF---FTSFSTNASILGDIKKRGFLKCGINTGLVGFA-EVKANGDW 56 M K FF+S L LI LF T + + DI+KRG L G+ + F + G + Sbjct: 1 MKKKFFLSAL-LISLFGLAATKPVQADTSVADIQKRGELVVGVKQDVPNFGYKDPKTGTY 59 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G + D + ++ + K++Y+P+ A+ R L ++Q+D+ +T+ E Sbjct: 60 SGIETDLAKMVADEL---KVKVRYVPVTAQTRGPLLDNEQVDM--DIATFTITEERKKLY 114 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F Y D GF+++K I S+ L+G +I V G+ T+ + + K ++K+ + Sbjct: 115 NFTSPYYTDASGFLVNKSAKIKSIEDLNGKTIGVAQGSITQRLITELGKKKDLKFKFVEL 174 Query: 177 ERVEEIDAAYRAHRCDAYTGDISAL 201 E+ + AHR DA++ D S L Sbjct: 175 GSYPELITSLHAHRIDAFSVDRSIL 199 >gi|296167869|ref|ZP_06850052.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896994|gb|EFG76617.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 326 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 59/221 (26%), Positives = 98/221 (44%), Gaps = 20/221 (9%) Query: 11 CLIILFFTSFSTNA---SILGDIKKRGFLKCGINTG--LVGFAEVKANGDWKGFDVDFCR 65 C + F T A + + DI+ RG L G++ G L F + G+ GFDVD Sbjct: 64 CDLTASLRPFPTKAQADAAVADIRARGRLIVGLDIGSNLFSFRD-PITGEITGFDVDIAG 122 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ IF PS ++Y L++ ER ALQ ++D++ + T R + + Y D Sbjct: 123 EIARDIFGAPSHVEYRILSSDERVTALQRSEVDVVVKTMTITCERRKQVNFS---TVYLD 179 Query: 126 G-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 Q + + I+ V LSG +CV GTT+ + + P++ V D Sbjct: 180 ANQRILAPRDSPITKVGDLSGKRVCVAKGTTS------LHRIRQIDPPPVIVSVVNWADC 233 Query: 185 --AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 A + DA + D S L L + P H++ P++ ++ Sbjct: 234 LVAMQQREIDAVSTDDSILAG--LVEEDPYLHIVGPNMATQ 272 >gi|225025468|ref|ZP_03714660.1| hypothetical protein EIKCOROL_02366 [Eikenella corrodens ATCC 23834] gi|224941752|gb|EEG22961.1| hypothetical protein EIKCOROL_02366 [Eikenella corrodens ATCC 23834] Length = 297 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 8/216 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L IK+RG ++ G+ F V ANG +GFDV+ + L++ + P K++++ A Sbjct: 56 LAKIKERGVIRIGVFGDKPPFGYVDANGKSQGFDVEIAKYLANDLLGSPDKVEFVLTEAA 115 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 R ++S ++D++ N T R + A + G + K I+ +SQL G Sbjct: 116 NRVEYVRSGKVDLILANFTQTPERAEVVDFASPYMNV--ALGVVSPKGAPITDLSQLEGK 173 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 ++ V GTT + YF ++ + + F++ E A + R A D + L+A Sbjct: 174 TLLVNKGTTADA----YFTKNHPNINLLKFDQNTETFDALKDGRGVALAHDNALLWAWAK 229 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 N P+ V++ +I +APA+ +GD N V+ Sbjct: 230 EN--PNFEVVIGNIGPAEHIAPAVRKGDQSLLNWVN 263 >gi|160880801|ref|YP_001559769.1| extracellular solute-binding protein [Clostridium phytofermentans ISDg] gi|160429467|gb|ABX43030.1| extracellular solute-binding protein family 3 [Clostridium phytofermentans ISDg] Length = 287 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 63/227 (27%), Positives = 104/227 (45%), Gaps = 15/227 (6%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 T + A L DIKK G +K G+ + F V +NGD +G+DV F + ++ + K Sbjct: 30 TGATAKARTLEDIKKDGKIKIGVFSDKNPFGYVDSNGDIQGYDVYFAKRIAKDLLGSEDK 89 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKK 135 I+++ + A R L+S ++D+ N T R ++ L + + G + Sbjct: 90 IEFVYMEAANRVEYLKSAKVDVTLANFTVTKDRSEQVDFALPYMKVAL----GVVSPDNA 145 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I+ V QL ++ V GTT E YF ++ + F+ +E A R DA++ Sbjct: 146 LITDVDQLKDKTLIVVKGTTAET----YFMENHSDIKLLKFDEYQEAYDALLDGRGDAFS 201 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE---WYN 239 D + + A L N S V + I S +APA+ +G+ E W N Sbjct: 202 TDNTEVLAWALQNKGFS--VGIESIGSIDAIAPAVQKGNKELLDWIN 246 >gi|330837353|ref|YP_004411994.1| amino acid ABC transporter substrate-binding protein, PAAT family [Spirochaeta coccoides DSM 17374] gi|329749256|gb|AEC02612.1| amino acid ABC transporter substrate-binding protein, PAAT family [Spirochaeta coccoides DSM 17374] Length = 269 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 64/247 (25%), Positives = 108/247 (43%), Gaps = 15/247 (6%) Query: 6 FVSILCLIIL----FFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFA-EVKANGDWK 57 V +LC++++ F + S + + IK RG L G+ + GF + + G Sbjct: 9 LVMLLCVMLVSTSVLFAAGSKESGASNEVDKIKSRGVLNVGVKVDVPGFGYKDISTGANV 68 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GF+ D R ++ I D SK+ + P+ AK R L + ++DI+ +T+ E L Sbjct: 69 GFETDLARQIAKVILGDASKVSFTPVTAKTRGPLLDTGELDIVIAT--FTVTEERKLSYE 126 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F I Y D ++ K G S+ L G +I V TT+ L K + + Sbjct: 127 FSTIYYTDAVSLLVKKSGGYKSLKDLDGKTIGVAQSATTKAVLETEAKNQGITLKFSEYA 186 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E+ A + R D+++ D + L + SE ILPD S A+ +G+ Sbjct: 187 SYPELKVALDSGRIDSFSVDRAILMGY---VEDSSE--ILPDKYSPQEYGAAMKKGNLAL 241 Query: 238 YNIVSWT 244 ++V+ T Sbjct: 242 LSVVNST 248 >gi|218887872|ref|YP_002437193.1| extracellular solute-binding protein family 3 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758826|gb|ACL09725.1| extracellular solute-binding protein family 3 [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 275 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 63/242 (26%), Positives = 106/242 (43%), Gaps = 15/242 (6%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 +++ + + S + + I+K ++ GI T + A G+W GFD D Sbjct: 6 LLAMASALTVLMASVAMAGPVFDRIQKEKKIRIGIMTDSIPGAFYNEKGEWGGFDYDMAT 65 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ + + ++Q +N K R +QS QID+ N T RE + F +FD Sbjct: 66 EVAKRMGVEIERVQ---VNNKTRIALVQSGQIDLSVSNM--THTRERDKSVDFSLTYFFD 120 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH---NMKYHPIVFERVEEI 182 GQ I+ KK SV + G I GTT+E+ + K N + + I F++ E Sbjct: 121 GQK-ILAKKGQFKSVKDMVGKKIATMQGTTSEVNVRRALKEAGDPNAETNVISFQKESEC 179 Query: 183 DAAYRAHRCDAYTGDISAL--YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A + R ++ D S L YA K P + ++ D +S P A+ Q D+ + Sbjct: 180 FQALQNGRVAGWSTDASILVGYAAKT----PGQFELVGDFLSDEPYGMAMPQDDSALRDA 235 Query: 241 VS 242 V+ Sbjct: 236 VN 237 >gi|332179316|gb|AEE15005.1| ABC-type transporter, periplasmic subunit family 3 [Thermodesulfobium narugense DSM 14796] Length = 270 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 58/221 (26%), Positives = 97/221 (43%), Gaps = 10/221 (4%) Query: 30 IKKRGFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 IK RG L G+ + F + G +GF++D ++ I +P K+ + + K R Sbjct: 42 IKDRGVLNVGVKYDVPKFGYKDPKTGKVEGFEIDIAHEMAKKILGNPDKVNLIAVTPKTR 101 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF-DGQGFIMHKKKGISSVSQLSGAS 147 L + ++D++ T RE S + I YF DG ++ K GI S + L+G + Sbjct: 102 GPLLDNGEVDMVIATFTITPEREKSFNFS---IPYFTDGVALLVKKDSGIKSFTDLNGKT 158 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 + V TT+ + KA +K + + F EI AA + R A++ D + LY Sbjct: 159 VGVAQSATTKGAIEAEAKAKGIKVNVLEFASYPEIKAALESGRVQAFSTDGAILYGY--- 215 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 ILPD + A+ +G+ +V+ T M Sbjct: 216 --LDDSTTILPDRFAPQNYGIAMKKGNDGLLKLVNSTLEEM 254 >gi|291276583|ref|YP_003516355.1| putative amino acid transporter periplasmic solute-binding protein [Helicobacter mustelae 12198] gi|290963777|emb|CBG39612.1| putative amino-acid transporter periplasmic solute-binding protein [Helicobacter mustelae 12198] Length = 272 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 61/244 (25%), Positives = 120/244 (49%), Gaps = 14/244 (5%) Query: 1 MYKDFFVSILCLIILFF--TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K F+ I+ + ++F+ +S S IK++G L+ G+ + F V A G++ G Sbjct: 1 MKKFAFLFIIFMTMMFWGCSSDKEKQSNFDLIKQKGVLRVGVFSDKPPFGYVDAKGEFDG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDV + ++ + + ++++ P+ A R L+S ++D++ N T R + A Sbjct: 61 FDVYIAKRIAKDLLGEKGRVEFYPVEAAARIEFLKSGKVDLIMANFTKTKERAEVVDFA- 119 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 +P Y ++ K I+++SQL ++ V GTT + YF ++ + + +++ Sbjct: 120 KP--YMKVSLGVVSKNGEITTISQLKDQTLIVDRGTTADF----YFSKNHPEVKLLKYDQ 173 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT--- 235 E A ++ R A D + L+A N P V + ++ ++ +APAI++GD Sbjct: 174 NTEAFLALKSDRGVALAHDNTLLFAWAKQN--PPFAVGIAELGNQDVIAPAIVKGDAKFL 231 Query: 236 EWYN 239 +W N Sbjct: 232 DWLN 235 >gi|254818982|ref|ZP_05223983.1| GlnH [Mycobacterium intracellulare ATCC 13950] Length = 325 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 20/221 (9%) Query: 11 CLIILFFTSFSTNA---SILGDIKKRGFLKCGINTG--LVGFAEVKANGDWKGFDVDFCR 65 C + F T A + + DI+ RG L G++ G L F + G+ GFDVD Sbjct: 63 CDLTASLRPFPTKAEADAAVADIRARGRLIVGLDIGSNLFSFRD-PITGEITGFDVDLAG 121 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ IF PS ++Y L++ ER ALQ ++DI+ + T R + + Y D Sbjct: 122 EIARDIFGAPSHVEYRILSSDERVTALQRGEVDIVVKTMTITCDRRKLVNFS---TVYLD 178 Query: 126 G-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 Q + + I VS LSG +CV GTT+ + + P++ V D Sbjct: 179 ANQRILAPRDSSIVKVSDLSGKRVCVAKGTTS------LHRIRQIDPPPVIVSVVNWADC 232 Query: 185 --AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 A + DA + D S L L + P H++ P++ ++ Sbjct: 233 LVAMQQREIDAVSTDDSILAG--LVEEDPYLHIVGPNMATQ 271 >gi|332041344|gb|EGI77706.1| extracellular solute-binding protein family 3 [Hylemonella gracilis ATCC 19624] Length = 280 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 68/240 (28%), Positives = 109/240 (45%), Gaps = 25/240 (10%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK-----GFDVDFCRALS 68 IL + + +A L DIKK+G L GI +G E + D K G+++D A++ Sbjct: 17 ILSLGAVTAHADQLADIKKKGVLVFGI----LGIDEPNSFVDPKTRQYIGYEIDLANAIA 72 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE--ISLGLAFRPITYFDG 126 I K ++ + R LQ +D+L+ + RE I GL + G Sbjct: 73 QKI---GVKAEFKQVAVAARIPELQQGHVDLLAASLTHNKEREALIDFGLTH----FVTG 125 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 ++ KK GI+SV QL G + G T E L + + FE ++ A Sbjct: 126 SKVLVTKKSGITSVQQLGGKKVVTVKGGTQEPNLKRAVPTAEV----VTFESTQQAFLAL 181 Query: 187 RAHRCDAYTGDISALYA--LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + + AY D S+LY+ LKL + ++V+LP+ ++ PLA I +G+T +V T Sbjct: 182 QQGKGVAYVNDESSLYSDVLKL-GPKAKDYVVLPENLNVEPLAIGIKKGETALKAVVDQT 240 >gi|293364951|ref|ZP_06611668.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus oralis ATCC 35037] gi|291316401|gb|EFE56837.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus oralis ATCC 35037] Length = 273 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 57/205 (27%), Positives = 99/205 (48%), Gaps = 10/205 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFA-EVKANGDW 56 M K FF+S L LI LF + + A + + DI+KRG L G+ + F + G + Sbjct: 10 MKKKFFLSAL-LISLFSLAAAKPAQADTSVADIQKRGELVVGVKQDVPNFGYKDPKTGTY 68 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G + D + ++ + KI+Y+P+ A+ R L ++Q+D+ +T+ E Sbjct: 69 SGIETDLAKMIADEL---KVKIRYVPVTAQTRGPLLDNEQVDM--DIATFTITDERKKLY 123 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F Y D GF+++K I S+ L+G +I V G+ T+ + + K + + + Sbjct: 124 NFTSPYYTDSSGFLVNKSANIKSIEDLNGKTIGVAQGSITQRLITELGKKKGLTFKFVEL 183 Query: 177 ERVEEIDAAYRAHRCDAYTGDISAL 201 E+ + AHR DA++ D S L Sbjct: 184 GSYPELITSLHAHRIDAFSVDRSIL 208 >gi|171780123|ref|ZP_02921027.1| hypothetical protein STRINF_01911 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281471|gb|EDT46906.1| hypothetical protein STRINF_01911 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 272 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 48/173 (27%), Positives = 86/173 (49%), Gaps = 6/173 (3%) Query: 30 IKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 I+ G LK G+ + F A G ++G +VD + ++ + K+ + + + R Sbjct: 40 IQDAGVLKVGVKQDVPNFGYYSAETGKYEGMEVDLAKKIAKKL---GVKVSFTAVTPQTR 96 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 L + QIDIL +T+ E A Y+D GF+++K KG S++ L G +I Sbjct: 97 EALLDNGQIDILIAT--YTITEERQASYAISDPYYYDEIGFLVNKSKGYDSIADLDGLTI 154 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 V G+TT+ + +Y +AHN+ ++ + E+ + A+R A++ D S L Sbjct: 155 GVAQGSTTKSAIEEYGEAHNLSFNFVQLGSYPELAISLYANRISAFSVDKSIL 207 >gi|317009782|gb|ADU80362.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter pylori India7] Length = 277 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 64/237 (27%), Positives = 109/237 (45%), Gaps = 16/237 (6%) Query: 10 LCLIILFFTSFSTNASILGD----IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 L LI L F++ S + D IK+RG LK G+ + F V + G ++G+DV + Sbjct: 14 LVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGYDVVIAK 73 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ + D +KI+++P+ A R L++ ++DI+ N T RE + A +P Y Sbjct: 74 RMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKVVDFA-KP--YMK 130 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 ++ K I ++ +L + V GTT + YF + + FE+ E A Sbjct: 131 VALGVVSKDGVIKNIEELKDKELIVNKGTTADF----YFTKNYPNIKLLKFEQNTETFLA 186 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT---EWYN 239 ++ A D + L A T P + + + K +APAI +G+ EW N Sbjct: 187 LLNNKATALAHDNTLLLA--WTKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLEWLN 241 >gi|118468998|ref|YP_885192.1| extracellular solute-binding protein, family protein 3 [Mycobacterium smegmatis str. MC2 155] gi|118170285|gb|ABK71181.1| Bacterial extracellular solute-binding protein, family protein 3 [Mycobacterium smegmatis str. MC2 155] Length = 322 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 16/232 (6%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTG--LVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 F++ + + +I+ RG L G++ G L F + G GFDVD +S IF Sbjct: 69 FSNKEEAEAAVANIRARGRLIVGLDIGSNLFSFRD-PITGQITGFDVDIAGEVSRDIFGT 127 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 PSK++Y L++ +R AL++ Q+DI+ + T R+ + F + Q + + Sbjct: 128 PSKVEYRILSSADRITALRNNQVDIVVKTMTITCERKKLVN--FSTVYLMANQRILASRD 185 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA--AYRAHRCD 192 IS S LSG +CV GTT+ + + PI+ V D A + + D Sbjct: 186 SNISQASDLSGRRVCVVDGTTS------LQRIQQISPSPIIVSVVTWADCLVALQQRQAD 239 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 A + D S L L + P H++ P +S+ P + +T +V+ T Sbjct: 240 AVSTDDSILAGLVAQD--PYLHIVGPS-LSQEPYGIGVNLENTGLVRVVNGT 288 >gi|261379487|ref|ZP_05984060.1| CjaA protein [Neisseria subflava NJ9703] gi|284797947|gb|EFC53294.1| CjaA protein [Neisseria subflava NJ9703] Length = 284 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 65/235 (27%), Positives = 112/235 (47%), Gaps = 16/235 (6%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 +S S+ A+ + IK++G ++ G+ F V ANG +GFDV+ + L+ + P K Sbjct: 32 SSQSSGAATVASIKEKGVIRIGVFGDKPPFGYVDANGKNQGFDVEIAKDLAKDLLGSPDK 91 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++++ A R ++S ++D++ N +T E + + F G + K K I Sbjct: 92 VEFVLTEAANRVEYVRSGKVDLILAN--FTKTPERTEAVDFADPYMKVALGVVSPKDKPI 149 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV----FERVEEIDAAYRAHRCDA 193 + V+QL ++ V GTT AD F N HP V F++ E A + R A Sbjct: 150 TDVAQLKDQTLLVNKGTT-----ADAFFTKN---HPEVKLLKFDQNTETFDALKDGRGVA 201 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 D + L+A N P+ V + ++ +APA+ +G+T+ N V+ AM Sbjct: 202 LAHDNALLWAWAKEN--PNFEVAIGNLGPAEFIAPAVQKGNTDLLNWVNGEIAAM 254 >gi|307703202|ref|ZP_07640148.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus oralis ATCC 35037] gi|307623277|gb|EFO02268.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus oralis ATCC 35037] Length = 264 Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 57/205 (27%), Positives = 99/205 (48%), Gaps = 10/205 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFA-EVKANGDW 56 M K FF+S L LI LF + + A + + DI+KRG L G+ + F + G + Sbjct: 1 MKKKFFLSAL-LISLFSLAAAKPAQADTSVADIQKRGELVVGVKQDVPNFGYKDPKTGTY 59 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G + D + ++ + KI+Y+P+ A+ R L ++Q+D+ +T+ E Sbjct: 60 SGIETDLAKMIADEL---KVKIRYVPVTAQTRGPLLDNEQVDM--DIATFTITDERKKLY 114 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F Y D GF+++K I S+ L+G +I V G+ T+ + + K + + + Sbjct: 115 NFTSPYYTDSSGFLVNKSANIKSIEDLNGKTIGVAQGSITQRLITELGKKKGLTFKFVEL 174 Query: 177 ERVEEIDAAYRAHRCDAYTGDISAL 201 E+ + AHR DA++ D S L Sbjct: 175 GSYPELITSLHAHRIDAFSVDRSIL 199 >gi|15645786|ref|NP_207963.1| glutamine ABC transporter, periplasmic glutamine-binding protein (glnH) [Helicobacter pylori 26695] gi|2314331|gb|AAD08218.1| glutamine ABC transporter, periplasmic glutamine-binding protein (glnH) [Helicobacter pylori 26695] Length = 277 Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 64/237 (27%), Positives = 108/237 (45%), Gaps = 16/237 (6%) Query: 10 LCLIILFFTSFSTNASILGD----IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 L LI L F + S + D IK+RG LK G+ + F V + G ++G+DV + Sbjct: 14 LVLIALVFNACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGYDVVIAK 73 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ + D +KI+++P+ A R L++ ++DI+ N T RE + A +P Y Sbjct: 74 RMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKVVDFA-KP--YMK 130 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 ++ K I ++ +L + V GTT + YF + + FE+ E A Sbjct: 131 VALGVVSKDGVIKNIEELKDKELIVNKGTTADF----YFTKNYPNIKLLKFEQNTETFLA 186 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT---EWYN 239 ++ A D + L A T P + + + K +APAI +G+ EW N Sbjct: 187 LLNNKATALAHDNTLLLA--WTKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLEWLN 241 >gi|317178527|dbj|BAJ56315.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter pylori F30] Length = 277 Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 64/237 (27%), Positives = 109/237 (45%), Gaps = 16/237 (6%) Query: 10 LCLIILFFTSFSTNASILGD----IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 L LI L F++ S + D IK+RG LK G+ + F V + G ++G+DV + Sbjct: 14 LVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGQYQGYDVVIAK 73 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ + D +KI+++P+ A R L++ ++DI+ N T RE + A +P Y Sbjct: 74 RMALDLLGDENKIEFIPIEASARVEFLKANKVDIIMANFTRTKEREKVVDFA-KP--YMK 130 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 ++ K I ++ +L + V GTT + YF + + FE+ E A Sbjct: 131 VALGVISKDGVIKNIEELKDKELIVNKGTTADF----YFTKNYPNIKLLKFEQNTETFLA 186 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT---EWYN 239 ++ A D + L A T P + + + K +APAI +G+ EW N Sbjct: 187 LLNNKAIALAHDNTLLLA--WTKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLEWLN 241 >gi|46580747|ref|YP_011555.1| amino acid ABC transporter periplasmic amino acid-binding protein [Desulfovibrio vulgaris str. Hildenborough] gi|120601965|ref|YP_966365.1| extracellular solute-binding protein [Desulfovibrio vulgaris DP4] gi|46450167|gb|AAS96815.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Desulfovibrio vulgaris str. Hildenborough] gi|120562194|gb|ABM27938.1| amino acid ABC transporter substrate-binding protein, PAAT family [Desulfovibrio vulgaris DP4] gi|311234461|gb|ADP87315.1| extracellular solute-binding protein family 3 [Desulfovibrio vulgaris RCH1] Length = 270 Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 64/254 (25%), Positives = 117/254 (46%), Gaps = 16/254 (6%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPS 76 T+ +A L +IK+RG L CG+ +V F + + + GFDVD C+ ++ Sbjct: 16 TAAVAHAGKLDEIKQRGTLVCGVKDSVVPFGFIDETSKQLVGFDVDICQFIADRA---GV 72 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD-GQGFIMHKKK 135 K++ + + R L +D+++ R+ + + ITYFD GQ ++ K Sbjct: 73 KLEVKTVTSATRIPMLTQGSVDLVAATMTHKFERDDVIDFS---ITYFDAGQRLLVKKGG 129 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 GI S + L G + G+T+E + KA + F+ + A + + +A T Sbjct: 130 GIKSAADLKGKKVATVKGSTSEKNM----KAAQPDCVVVSFDEYPQAFLALKQGKAEAVT 185 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D L LK ++ P + I+ D I+ P +++ D+++ + V+ + M T G Sbjct: 186 TDEPILVGLKNSDPEPDKWDIVGDFIASEPYGLGLVENDSKFRDFVNKSLAEMWTT---G 242 Query: 256 ITQKNINQ-VSKDT 268 QK+ ++ KDT Sbjct: 243 AYQKSYDKWFGKDT 256 >gi|254779722|ref|YP_003057828.1| ABC-type transport system, periplasmic component; putative amino-acid transporter GlnH; putative signal peptide [Helicobacter pylori B38] gi|254001634|emb|CAX29767.1| ABC-type transport system, periplasmic component; putative amino-acid transporter GlnH; putative signal peptide [Helicobacter pylori B38] Length = 287 Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 64/237 (27%), Positives = 109/237 (45%), Gaps = 16/237 (6%) Query: 10 LCLIILFFTSFSTNASILGD----IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 L LI L F++ S + D IK+RG LK G+ + F V + G ++G+DV + Sbjct: 24 LVLIALVFSACSDSHKEKKDALEVIKQRGILKVGVFSDKPPFGSVDSKGKYQGYDVVIAK 83 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ + D +KI+++P+ A R L++ ++DI+ N T RE + A +P Y Sbjct: 84 RMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTHTKEREKVVDFA-KP--YMK 140 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 ++ K I ++ +L + V GTT + YF + + FE+ E A Sbjct: 141 VALGVVSKDGVIKNIEELKDKELIVNKGTTADF----YFTKNYPNIKLLKFEQNTETFLA 196 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT---EWYN 239 ++ A D + L A T P + + + K +APAI +G+ EW N Sbjct: 197 LLNNKAIALAHDNTLLLA--WTKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLEWLN 251 >gi|317012953|gb|ADU83561.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter pylori Lithuania75] Length = 277 Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 64/237 (27%), Positives = 109/237 (45%), Gaps = 16/237 (6%) Query: 10 LCLIILFFTSFSTNASILGD----IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 L LI L F++ S + D IK+RG LK G+ + F V + G ++G+DV + Sbjct: 14 LVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGQYQGYDVIIAK 73 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ + D +KI+++P+ A R L++ ++DI+ N T RE + A +P Y Sbjct: 74 RMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKVVDFA-KP--YMK 130 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 ++ K I ++ +L + V GTT + YF + + FE+ E A Sbjct: 131 VALGVISKDGVIKNIEELKDKELIVNKGTTADF----YFTKNYPNIKLLKFEQNTETFLA 186 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT---EWYN 239 ++ A D + L A T P + + + K +APAI +G+ EW N Sbjct: 187 LLNNKAIALAHDNTLLLA--WTKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLEWLN 241 >gi|322374749|ref|ZP_08049263.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus sp. C300] gi|321280249|gb|EFX57288.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus sp. C300] Length = 293 Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 62/228 (27%), Positives = 108/228 (47%), Gaps = 17/228 (7%) Query: 1 MYKDFFVSILCLIILF---FTSFSTNASILGDIKKRGFLKCGINTGLVGFA-EVKANGDW 56 M K FF+S L LI LF T + + DI+KRG L G+ + F + G + Sbjct: 30 MKKKFFLSAL-LISLFGLAATKPVQADTSVADIQKRGELVVGVKQDVPNFGYKDPKTGTY 88 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G + D + ++ + K++Y+P+ A+ R L ++Q+D+ +T+ E Sbjct: 89 SGIETDLAKMIADEL---KVKVRYVPVTAQTRGPLLDNEQVDM--DIATFTITDERKKLY 143 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F Y D GF+++K I S+ L+G +I V G+ T+ + + K + + + Sbjct: 144 NFTSPYYTDASGFLVNKSANIKSIEDLNGKTIGVAQGSITQRLITELGKKKGLTFKFVEL 203 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYA-----LKLTND--RPSEHVIL 217 E+ + AHR DA++ D S L +L ND +PS++ I+ Sbjct: 204 GSYPELITSLHAHRIDAFSVDRSILSGYISKRTELLNDSFKPSDYGIV 251 >gi|308062450|gb|ADO04338.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter pylori Cuz20] Length = 277 Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 67/266 (25%), Positives = 120/266 (45%), Gaps = 20/266 (7%) Query: 10 LCLIILFFTSFSTNASILGD----IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 L LI L F++ S + D IK+RG LK G+ + F V + G ++G+DV + Sbjct: 14 LVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGYDVIIAK 73 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ + D +KI+++P+ A R L++ ++DI+ N T RE + A +P Y Sbjct: 74 RMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKVVDFA-KP--YMK 130 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 ++ K I ++ +L + V GTT + YF + + FE+ E A Sbjct: 131 VALGVISKDGAIKNIEELENKELIVNKGTTADF----YFTKNYPNIKLLKFEQNTETFLA 186 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 ++ A D + L A T P + + + K +APAI +G+ + ++ W Sbjct: 187 LLNNKAIALAHDNTLLLA--WTKQHPEFKLGITSLGDKDVIAPAIKKGNPK---LLEWLD 241 Query: 246 YAMVTAEELGITQKNINQVSKDTTNP 271 M + I+ + + K+T P Sbjct: 242 NEMDSL----ISSDFLKEAYKETLEP 263 >gi|228995972|ref|ZP_04155628.1| hypothetical protein bmyco0003_5680 [Bacillus mycoides Rock3-17] gi|229003589|ref|ZP_04161405.1| hypothetical protein bmyco0002_5620 [Bacillus mycoides Rock1-4] gi|228757631|gb|EEM06860.1| hypothetical protein bmyco0002_5620 [Bacillus mycoides Rock1-4] gi|228763745|gb|EEM12636.1| hypothetical protein bmyco0003_5680 [Bacillus mycoides Rock3-17] Length = 276 Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 55/225 (24%), Positives = 106/225 (47%), Gaps = 13/225 (5%) Query: 21 STNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 ++ ++ IKKRG L G+ +T L G + A G +GFDVD +AL+ I D SK+ Sbjct: 36 TSGGKVVDQIKKRGKLVVGVKNDTNLFGLKD-PATGKVEGFDVDIAKALAKKILGDESKV 94 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 ++ + +K R L++ ID + T+ E + F + + GQ ++ K I Sbjct: 95 EFKEVTSKTRIPMLKNGDIDTIIAT--MTITEERKKEVDFSDVYFKAGQSLLVKKGSKIK 152 Query: 139 SVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 S+ + SG ++ G+T+ + + + + + FE E A +A + D T D Sbjct: 153 SIDDVKSGVTVLAVKGSTSTQNI----RKKSPEAKVLEFENYSEAFTALKAGKGDVLTTD 208 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + LY + + + + ++ I + P A+ +G T+ +++ Sbjct: 209 NAILYGM---AKQDANYQVVGKIFTDEPYGIAVQKGATDLTKVIN 250 >gi|237752493|ref|ZP_04582973.1| amino-acid ABC transporter periplasmic solute-binding protein [Helicobacter winghamensis ATCC BAA-430] gi|229375982|gb|EEO26073.1| amino-acid ABC transporter periplasmic solute-binding protein [Helicobacter winghamensis ATCC BAA-430] Length = 284 Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 61/223 (27%), Positives = 103/223 (46%), Gaps = 12/223 (5%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 ST+ L IK++G + G+ + F V G+ GFDV R L+ ++ D SK+++ Sbjct: 36 STSEDRLAKIKQKGVITIGVFSDKPPFGFVNDKGENDGFDVYVARELAKSLLGDASKVKF 95 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + A R L+S ++D++ N T R + A Y I+ K+ I V Sbjct: 96 ELVEAASRVEFLKSGKVDLIMANFTKTPERAEVVDFA---TPYMKVALGIVSKEGAIKDV 152 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + L G + V GTT + YF ++ + + F++ E A + R DA D Sbjct: 153 ADLKGKKLIVNKGTTADF----YFTKNHPEIELVKFDQNTEAFLALKDGRGDALAHDNLL 208 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT---EWYNI 240 L+A N P+ V + + ++ +APA+ +GD EW N+ Sbjct: 209 LFAWAKEN--PNFAVAISKLGNEDVIAPAVKKGDKALLEWVNL 249 >gi|317182426|dbj|BAJ60210.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter pylori F57] Length = 277 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 64/237 (27%), Positives = 108/237 (45%), Gaps = 16/237 (6%) Query: 10 LCLIILFFTSFSTNASILGD----IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 L LI L F++ S + D IK+RG LK G+ + F V + G ++G+DV + Sbjct: 14 LVLITLVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGYDVVIAK 73 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ + D +KI+++P+ A R L++ ++DI+ N T RE + A +P Y Sbjct: 74 RMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKVVDFA-KP--YMK 130 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 ++ K I ++ +L + V GTT + YF + + FE+ E A Sbjct: 131 VALGVISKDGVIKNIEELKDKELIVNKGTTADF----YFTKNYPNIKLLKFEQNTETFLA 186 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT---EWYN 239 + A D + L A T P + + + K +APAI +G+ EW N Sbjct: 187 LLNDKAIALAHDNTLLLA--WTKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLEWLN 241 >gi|57506052|ref|ZP_00371975.1| glutamine ABC transporter, periplasmic glutamine-binding protein (glnH) [Campylobacter upsaliensis RM3195] gi|57015660|gb|EAL52451.1| glutamine ABC transporter, periplasmic glutamine-binding protein (glnH) [Campylobacter upsaliensis RM3195] Length = 277 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 59/245 (24%), Positives = 112/245 (45%), Gaps = 16/245 (6%) Query: 3 KDFFVSIL-CLIILFFTSFSTNASILGDI---KKRGFLKCGINTGLVGFAEVKANGDWKG 58 K +SI + +F T+ ++ S + I K G +K G+ F V G +G Sbjct: 2 KKILLSIFTAFVAVFLTACGSSESGVNSIERIKNAGVVKIGVFGDKPPFGYVDEKGTNQG 61 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR--EISLGL 116 +D+ F + ++ + D +K++++ + A R L+S ++DI+ N T R ++ L Sbjct: 62 YDIIFAKRIAKELLGDENKVEFVLVEAANRVEFLKSNKVDIILANFTQTPERAEQVDFAL 121 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + + G + K I SV L ++ + GTT + YF ++ + F Sbjct: 122 PYMKVAL----GVAVPKDSEIKSVEDLKDKTLILNKGTTADA----YFTKNHADIKTLKF 173 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 ++ E AA R DA D + L+A +RP V++ ++ ++ +APA+ +GD E Sbjct: 174 DQNTETFAALMDKRGDALAHDNTLLFA--WVKERPDYKVVIKELGNQDVIAPAVKKGDKE 231 Query: 237 WYNIV 241 + Sbjct: 232 LKEFI 236 >gi|228989782|ref|ZP_04149762.1| hypothetical protein bpmyx0001_5510 [Bacillus pseudomycoides DSM 12442] gi|228769929|gb|EEM18512.1| hypothetical protein bpmyx0001_5510 [Bacillus pseudomycoides DSM 12442] Length = 276 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 55/225 (24%), Positives = 106/225 (47%), Gaps = 13/225 (5%) Query: 21 STNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 ++ ++ IKKRG L G+ +T L G + A G +GFDVD +AL+ I D SK+ Sbjct: 36 TSGGKVVDQIKKRGKLVVGVKNDTNLFGLKD-PATGKVEGFDVDIAKALAKKILGDESKV 94 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 ++ + +K R L++ ID + T+ E + F + + GQ ++ K I Sbjct: 95 EFKEVTSKTRIPMLKNGDIDTIIAT--MTITEERKKEVDFSDVYFKAGQSLLVKKGSKIK 152 Query: 139 SVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 S+ + SG ++ G+T+ + + + + + FE E A +A + D T D Sbjct: 153 SIDDVKSGVTVLAVKGSTSTQNI----REKSPEAKVLEFENYSEAFTALKAGKGDVLTTD 208 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + LY + + + + ++ I + P A+ +G T+ +++ Sbjct: 209 NAILYGM---AKQDANYQVVGKIFTDEPYGIAVQKGATDLTKVIN 250 >gi|317180903|dbj|BAJ58689.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter pylori F32] Length = 277 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 64/237 (27%), Positives = 108/237 (45%), Gaps = 16/237 (6%) Query: 10 LCLIILFFTSFSTNASILGD----IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 L LI L F++ S + D IK+RG LK G+ + F V + G ++G+DV + Sbjct: 14 LVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGQYQGYDVVIAK 73 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ + D +KI+++P+ A R L++ ++DI+ N T RE + A +P Y Sbjct: 74 RMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKVVDFA-KP--YMK 130 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 ++ K I ++ +L + V GTT + YF + + FE+ E A Sbjct: 131 VALGVISKDGVIKNIEELKDKELIVNKGTTADF----YFTKNYPNIKLLKFEQNTETFLA 186 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT---EWYN 239 + A D + L A T P + + + K +APAI +G+ EW N Sbjct: 187 LLNDKAIALAHDNTLLLA--WTKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLEWLN 241 >gi|317014559|gb|ADU81995.1| amino acid ABC transporter [Helicobacter pylori Gambia94/24] Length = 277 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 63/237 (26%), Positives = 109/237 (45%), Gaps = 16/237 (6%) Query: 10 LCLIILFFTSFSTNASILGD----IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 L LI L F++ S + D IK+RG LK G+ + F V + G+++G+DV + Sbjct: 14 LVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGNYQGYDVVIAK 73 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ + D +KI+++P+ A R L++ ++DI+ N T RE + A +P Y Sbjct: 74 RMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREAVVDFA-KP--YMK 130 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 ++ K I ++ +L + V GTT + YF + + FE+ E A Sbjct: 131 VALGVISKDGVIKNIEELKDKELIVNKGTTADF----YFTKNYPNIKLLKFEQNTETFLA 186 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT---EWYN 239 ++ A D + L A P + + + K +APAI +G+ EW N Sbjct: 187 LLNNKAIALAHDNTLLLA--WVKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLEWLN 241 >gi|108563536|ref|YP_627852.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter pylori HPAG1] gi|107837309|gb|ABF85178.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter pylori HPAG1] Length = 277 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 64/237 (27%), Positives = 108/237 (45%), Gaps = 16/237 (6%) Query: 10 LCLIILFFTSFSTNASILGD----IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 L LI L F + S + D IK+RG LK G+ + F V + G ++G+DV + Sbjct: 14 LVLIALVFNACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGYDVVIAK 73 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ + D +KI+++P+ A R L++ ++DI+ N T RE + A +P Y Sbjct: 74 RMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKVVDFA-KP--YMK 130 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 ++ K I ++ +L + V GTT + YF + + FE+ E A Sbjct: 131 VALGVVSKDGVIKNIEELKDKELIVNKGTTADF----YFTKNYPNIKLLKFEQNTETFLA 186 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT---EWYN 239 ++ A D + L A T P + + + K +APAI +G+ EW N Sbjct: 187 LLNNKAIALAHDNTLLLA--WTKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLEWLN 241 >gi|288905435|ref|YP_003430657.1| amino acid ABC transporter, substrate binding protein [Streptococcus gallolyticus UCN34] gi|306831516|ref|ZP_07464674.1| ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|288732161|emb|CBI13726.1| Putative amino acid ABC transporter, substrate binding protein [Streptococcus gallolyticus UCN34] gi|304426301|gb|EFM29415.1| ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 292 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 68/258 (26%), Positives = 116/258 (44%), Gaps = 22/258 (8%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + A L +IK+ G +K G+ + F V GD++G+DV F L+ + D ++Y Sbjct: 41 TAKARTLDEIKESGTIKIGVFSDKKPFGYVDDKGDYQGYDVYFADRLAKDLGVD---VEY 97 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKKGIS 138 + ++ R L S ++DI+ N T R ++ L + + G + K IS Sbjct: 98 VAVDPASRVEYLTSAKVDIILANFTVTDERAEQVDFALPYMKVAL----GVVSPSSKLIS 153 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 SV L G ++ V GTT E YF+ + K + + +++ E A R DA + D Sbjct: 154 SVDDLEGKTLIVGKGTTAET----YFEKNYPKVNLLKYDQYSEAYQALLDGRGDALSTDN 209 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 + + A L N V + + +APA+ +G+TE ++ W + + T E Sbjct: 210 TEVLAWALEN--KGYEVGITSLGDTDTIAPAVQKGNTE---LLDWINDEIKTLGEENFFH 264 Query: 259 KNINQ----VSKDTTNPD 272 K+ + V D NPD Sbjct: 265 KDYEETLEPVYGDAANPD 282 >gi|217034252|ref|ZP_03439670.1| hypothetical protein HP9810_2g31 [Helicobacter pylori 98-10] gi|216943312|gb|EEC22774.1| hypothetical protein HP9810_2g31 [Helicobacter pylori 98-10] Length = 277 Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 64/237 (27%), Positives = 108/237 (45%), Gaps = 16/237 (6%) Query: 10 LCLIILFFTSFSTNASILGD----IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 L LI L F++ S + D IK+RG LK G+ + F V + G ++G+DV + Sbjct: 14 LVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGQYQGYDVVIAK 73 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ + D +KI+++P+ A R L++ ++DI+ N T RE + A +P Y Sbjct: 74 RMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKVVDFA-KP--YMK 130 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 ++ K I ++ +L + V GTT + YF + + FE+ E A Sbjct: 131 VALGVISKDGVIKNIEELKDKELIVNKGTTADF----YFTKNYPNIKLLKFEQNTETFLA 186 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT---EWYN 239 + A D + L A T P + + + K +APAI +G+ EW N Sbjct: 187 LLNDKAIALAHDNTLLLA--WTKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLEWLN 241 >gi|108797521|ref|YP_637718.1| extracellular solute-binding protein [Mycobacterium sp. MCS] gi|119866607|ref|YP_936559.1| extracellular solute-binding protein [Mycobacterium sp. KMS] gi|108767940|gb|ABG06662.1| amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium sp. MCS] gi|119692696|gb|ABL89769.1| amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium sp. KMS] Length = 331 Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 56/210 (26%), Positives = 100/210 (47%), Gaps = 18/210 (8%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTG--LVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 F T +A++ I++RG L G++ G L F + GD GFDVD ++ IF Sbjct: 78 FPTRAEADAAV-AYIRERGRLIVGLDIGSNLFSFRD-PITGDITGFDVDIAGEIARDIFG 135 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG-QGFIMH 132 P+++ Y L++ +R +ALQ+ Q+D++ ++ T R+ +G + Y + Q + Sbjct: 136 SPAQVDYRILSSADRIVALQNNQVDVVVKSMTITCERKKKVGFS---TVYLNADQRILAP 192 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA--AYRAHR 190 + I+ + LSG +CV GTT+ + + PI+ V D A + + Sbjct: 193 RDSAITRAADLSGRRVCVVKGTTS------LRRVQQISPPPIIVSTVTWADCLVALQQRQ 246 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDI 220 DA + D + L L + P H++ P + Sbjct: 247 VDAVSTDDAILAGLVAQD--PYLHIVGPSM 274 >gi|313891392|ref|ZP_07825008.1| ABC transporter, substrate-binding protein, family 3 [Dialister microaerophilus UPII 345-E] gi|313120167|gb|EFR43343.1| ABC transporter, substrate-binding protein, family 3 [Dialister microaerophilus UPII 345-E] Length = 281 Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 61/248 (24%), Positives = 112/248 (45%), Gaps = 23/248 (9%) Query: 5 FFVSILCLIILFFTSFSTNAS--------ILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 F ++I+ ++ L F S + S + +IKK G L G+ + F + NG++ Sbjct: 7 FLMAIVSILALTFASGCASNSETESKPYRSIAEIKKSGELIIGVFSDKAPFGYIDKNGNY 66 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR--EISL 114 +G+D+ F L+ + P I P N E ++ ++DI+ N T R ++ Sbjct: 67 RGYDIYFAERLAKDLGVKPKYISLEPANRTEY---AKTGKVDIILANFTMTKERAEQVDF 123 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 L + + G + K + I+SV QL G + V GTT E YF ++ + + Sbjct: 124 ALPYMKVAI----GVVSPKNQNITSVEQLKGKKLIVAKGTTAET----YFTENHPEIELL 175 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 F++ E A R DA++ D + + A + N P V + + +APA+ +G+ Sbjct: 176 KFDQYSETYNALLDKRGDAFSTDNTEVLAWAMKN--PEYKVGITHLGKDEVIAPAVQKGN 233 Query: 235 TEWYNIVS 242 E + ++ Sbjct: 234 KELLDYIN 241 >gi|308184914|ref|YP_003929047.1| glutamine ABC transporter periplasmic glutamine-binding protein [Helicobacter pylori SJM180] gi|308060834|gb|ADO02730.1| glutamine ABC transporter periplasmic glutamine-binding protein [Helicobacter pylori SJM180] Length = 277 Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 67/266 (25%), Positives = 119/266 (44%), Gaps = 20/266 (7%) Query: 10 LCLIILFFTSFSTNASILGD----IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 L LI L F++ S + D IK+RG LK G+ + F V + G ++G+DV + Sbjct: 14 LVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGYDVVIAK 73 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ + D +KI+++P+ A R L++ ++DI+ N T RE + A +P Y Sbjct: 74 RMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKVVDFA-KP--YMK 130 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 ++ K I ++ +L + V GTT + YF H + FE+ E A Sbjct: 131 VALGVVSKDGVIKNIEELENKELIVNKGTTADF----YFTKHYPNIKLLKFEQNTETFLA 186 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 ++ A D + L A P + + + K +APAI +G+ + ++ W Sbjct: 187 LLNNKAIALAHDNTLLLA--WIKQHPEFKLGITSLGDKDVIAPAIKKGNPK---LLEWLD 241 Query: 246 YAMVTAEELGITQKNINQVSKDTTNP 271 M + I+ + + K+T P Sbjct: 242 NEMDSL----ISSDFLKEAYKETLEP 263 >gi|261838498|gb|ACX98264.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter pylori 51] Length = 287 Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 64/237 (27%), Positives = 108/237 (45%), Gaps = 16/237 (6%) Query: 10 LCLIILFFTSFSTNASILGD----IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 L LI L F++ S + D IK+RG LK G+ + F V + G ++G+DV + Sbjct: 24 LVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGYDVVIAK 83 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ + D +KI+++P+ A R L++ ++DI+ N T RE + A +P Y Sbjct: 84 RMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKVVDFA-KP--YMK 140 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 ++ K I ++ +L + V GTT + YF + + FE+ E A Sbjct: 141 VALGVISKDGVIKNIEELKDKELIVNKGTTADF----YFTKNYPNIKLLKFEQNTETFLA 196 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT---EWYN 239 + A D + L A T P + + + K +APAI +G+ EW N Sbjct: 197 LLNDKAIALAHDNTLLLA--WTKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLEWLN 251 >gi|315612724|ref|ZP_07887635.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis ATCC 49296] gi|315314834|gb|EFU62875.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis ATCC 49296] Length = 273 Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 56/205 (27%), Positives = 98/205 (47%), Gaps = 10/205 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFA-EVKANGDW 56 M K FF+S L LI LF + + + + DI+KRG L G+ + F + G + Sbjct: 10 MKKKFFLSAL-LISLFSLAAAKPVQADTSVADIQKRGELVVGVKQDVPNFGYKDPKTGTY 68 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G + D + ++ + KI+Y+P+ A+ R L ++Q+D+ +T+ E Sbjct: 69 SGIETDLAKMIADEL---KVKIRYVPVTAQTRGPLLDNEQVDM--DIATFTITDERKKLY 123 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F Y D GF+++K I S+ L+G +I V G+ T+ + + K + + + Sbjct: 124 NFTSPYYTDASGFLVNKSANIKSIEDLNGKTIGVAQGSITQRLITELGKKKGLTFKFVEL 183 Query: 177 ERVEEIDAAYRAHRCDAYTGDISAL 201 E+ + AHR DA++ D S L Sbjct: 184 GSYPELITSLHAHRIDAFSVDRSIL 208 >gi|270293187|ref|ZP_06199398.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus sp. M143] gi|270279166|gb|EFA25012.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus sp. M143] Length = 264 Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 10/205 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFA-EVKANGDW 56 M K FF+S L LI LF + + + + DI+KRG L G+ + F + G + Sbjct: 1 MKKKFFLSAL-LISLFSLAAAKPVQADTSVADIQKRGELVVGVKQDVPNFGYKNPKTGTY 59 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G + D + +++ + K++Y+P+ A+ R L ++Q+D+ +T+ E Sbjct: 60 SGIETDLAKMIANEL---KVKVRYVPVTAQTRGPLLDNEQVDL--DIATFTITDERKKLY 114 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F Y D GF+++K I S+ L+G +I V G+ T+ + + K + + + Sbjct: 115 NFTSPYYTDASGFLVNKSANIKSIEDLNGKTIGVAQGSITQRLITELGKKKGLTFKFVEL 174 Query: 177 ERVEEIDAAYRAHRCDAYTGDISAL 201 E+ + AHR DA++ D S L Sbjct: 175 GSYPELITSLHAHRIDAFSVDRSIL 199 >gi|315587062|gb|ADU41443.1| ABC superfamily ATP binding cassette transporter, binding protein [Helicobacter pylori 35A] Length = 287 Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 64/237 (27%), Positives = 108/237 (45%), Gaps = 16/237 (6%) Query: 10 LCLIILFFTSFSTNASILGD----IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 L LI L F++ S + D IK+RG LK G+ + F V + G ++G+DV + Sbjct: 24 LVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGQYQGYDVVIAK 83 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ + D +KI+++P+ A R L++ ++DI+ N T RE + A +P Y Sbjct: 84 RMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKVVDFA-KP--YMK 140 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 ++ K I ++ +L + V GTT + YF + + FE+ E A Sbjct: 141 VALGVVSKDGVIKNIEELKDKELIVNKGTTADF----YFTKNYPNIKLLKFEQNTETFLA 196 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT---EWYN 239 + A D + L A T P + + + K +APAI +G+ EW N Sbjct: 197 LLNDKAIALAHDNTLLLA--WTKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLEWLN 251 >gi|163734793|ref|ZP_02142231.1| glutamate/aspartate ABC transporter, periplasmic substrate-binding protein [Roseobacter litoralis Och 149] gi|161391898|gb|EDQ16229.1| glutamate/aspartate ABC transporter, periplasmic substrate-binding protein [Roseobacter litoralis Och 149] Length = 288 Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 52/214 (24%), Positives = 93/214 (43%), Gaps = 5/214 (2%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPSKIQYLPL 83 L I G + G V F+ + N + G+ +D C + A+ D I+Y+P+ Sbjct: 30 LDKIAASGEIVIGHRESSVPFSYLDENQNPVGYSIDLCMKIVDAVAAELDQELTIKYVPV 89 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 N K R + + ID+ +T L R+ + + P+T+ G + K GI+SV+ L Sbjct: 90 NPKTRIALMANGTIDLECGSTTNNLTRQQQV--EYLPVTFVTGTKILTRKDSGINSVADL 147 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 G ++ + GTT E + +A + + E + R DAY D L+ Sbjct: 148 DGMAVALAQGTTNERAVMAAVEAAGLDVKILPVRDHAEGMLSLETDRVDAYATDHILLHG 207 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 L + P + ++ D +S P A + + D+ + Sbjct: 208 LISKSKNPDDFAVVGDFLSFDPYALMVRRDDSAF 241 >gi|210135331|ref|YP_002301770.1| glutamine ABC transporter periplasmic glutamine-binding protein [Helicobacter pylori P12] gi|210133299|gb|ACJ08290.1| glutamine ABC transporter periplasmic glutamine-binding protein [Helicobacter pylori P12] Length = 277 Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 63/237 (26%), Positives = 108/237 (45%), Gaps = 16/237 (6%) Query: 10 LCLIILFFTSFSTNASILGD----IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 L LI L F++ S + D IK+RG LK G+ + F V + G ++G+DV + Sbjct: 14 LVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGYDVVIAK 73 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ + D +KI+++P+ A R L++ ++DI+ N T RE + A +P Y Sbjct: 74 RMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKVVDFA-KP--YMK 130 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 ++ K I ++ +L + V GTT + YF + + FE+ E A Sbjct: 131 VALGVVSKDGVIKNIEELKNKELIVNKGTTADF----YFTKNYPNIKLLKFEQNTETFLA 186 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT---EWYN 239 ++ A D + L A P + + + K +APAI +G+ EW N Sbjct: 187 LLNNKATALAHDNTLLLA--WAKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLEWLN 241 >gi|329121399|ref|ZP_08250024.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Dialister micraerophilus DSM 19965] gi|327469689|gb|EGF15156.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Dialister micraerophilus DSM 19965] Length = 281 Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 61/248 (24%), Positives = 113/248 (45%), Gaps = 23/248 (9%) Query: 5 FFVSILCLIILFFTSFSTNAS--------ILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 F ++I+ ++ L F S + S + +IKK G L G+ + F + NG++ Sbjct: 7 FLMAIVSILALTFASGCASNSETESKPYRSIAEIKKSGELIIGVFSDKAPFGYIDKNGNY 66 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR--EISL 114 +G+D+ F L+ + P I P N E ++ ++DI+ N T R ++ Sbjct: 67 RGYDIYFAERLAKDLGVKPKYISLEPANRTEY---AKTGKVDIILANFTVTKERAEQVDF 123 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 L + + G + K + I+SV QL G + V GTT E YF ++ + + Sbjct: 124 ALPYMKVAI----GVVSPKNQNITSVEQLKGKKLIVAKGTTAET----YFTENHPEIELL 175 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 F++ E +A R DA++ D + + A + N P V + + +APA+ +G+ Sbjct: 176 KFDQYAETYSALLDKRGDAFSTDNTEVLAWAMKN--PEYKVGITHLGKDEVIAPAVQKGN 233 Query: 235 TEWYNIVS 242 E + ++ Sbjct: 234 KELLDYIN 241 >gi|310644452|ref|YP_003949211.1| amino-acid abc transporter periplasmic solute-binding protein [Paenibacillus polymyxa SC2] gi|309249403|gb|ADO58970.1| Amino-acid ABC transporter periplasmic solute-binding protein [Paenibacillus polymyxa SC2] Length = 292 Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 66/255 (25%), Positives = 119/255 (46%), Gaps = 21/255 (8%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 +S S + + DIKK G ++ G+ F V + G +GFDV + + + D SK Sbjct: 34 SSGSAKFASIEDIKKNGKIRIGVFADKPPFGYVDSEGKNQGFDVYIAKRFAKDLLGDESK 93 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA--FRPITYFDGQGFIMHKKK 135 ++++ ++A R L+S ++DI+ N T R+ + A + +++ G + Sbjct: 94 VEFVLVDAASRVAYLESNKVDIIMANFTVTDERKEKVDFANPYMKLSF----GIVSPDSA 149 Query: 136 GISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 I+++ QL G+ + V GTT E YF + + F++ EI +A + R A Sbjct: 150 PITTIDQLKGSDQKLIVAKGTTAET----YFTKNYPDIKLLKFDQYTEIFSALKDKRGAA 205 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 D + L A N P V +P + +APA+ +G+ E ++ W + + T Sbjct: 206 IANDNTELIAWAKAN--PGFTVSIPAFGGQDTIAPAVAKGNKE---LLDWINNELAT--- 257 Query: 254 LGITQKNINQVSKDT 268 LG + ++Q KDT Sbjct: 258 LG-KENFVHQAYKDT 271 >gi|319638911|ref|ZP_07993669.1| ABC transporter [Neisseria mucosa C102] gi|317399815|gb|EFV80478.1| ABC transporter [Neisseria mucosa C102] Length = 284 Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 65/235 (27%), Positives = 112/235 (47%), Gaps = 16/235 (6%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 +S S+ A+ + IK++G ++ G+ F V ANG +GFDV+ + L+ + P K Sbjct: 32 SSQSSGAATVAAIKEKGVIRIGVFGDKPPFGYVDANGKNQGFDVEIAKDLAKDLLGSPDK 91 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++++ A R ++S ++D++ N +T E + + F G + K K I Sbjct: 92 VEFVLTEAANRVEYVRSGKVDLILAN--FTKTPERAEAVDFADPYMKVALGVVSSKDKPI 149 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV----FERVEEIDAAYRAHRCDA 193 + V+QL ++ V GTT AD F K HP V F++ E A + R A Sbjct: 150 TDVAQLKDQTLLVNKGTT-----ADAF---FTKSHPEVKLLKFDQNTETFDALKDGRGVA 201 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 D + L+A N P+ V + ++ +APA+ +G+T+ N V+ AM Sbjct: 202 LAHDNALLWAWAKEN--PNFEVAIGNLGPAEFIAPAVQKGNTDLLNWVNGEIAAM 254 >gi|227530663|ref|ZP_03960712.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus vaginalis ATCC 49540] gi|227349444|gb|EEJ39735.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus vaginalis ATCC 49540] Length = 285 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 62/216 (28%), Positives = 99/216 (45%), Gaps = 14/216 (6%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 IKKRG L+ + L + V +G G+DV+ R ++ + P IQ +NA R Sbjct: 46 IKKRGTLRVAVFGDLPPYGWVNKDGKRVGYDVELARRMAKDLGVKPKFIQ---VNANNRV 102 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 L S + DI+ N T R+ + A +P G + KKK I+ VSQL G + Sbjct: 103 DTLNSNKADIVLANFTVTPERKKVVDFA-KPYMKV-SVGVVSPKKKAITKVSQLKGKKVI 160 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V GTT E +YF + + F+ + A + +R A D S LYA + Sbjct: 161 VTKGTTAE----NYFTSKQPGVQLLKFDSKTQQFNALKNNRAAALADDNSYLYA--WVKN 214 Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 P V + I K ++PA+ +G+ +++W++ Sbjct: 215 NPKYTVGIKSIGPKQYISPAVKKGNKS---LLNWSN 247 >gi|306825704|ref|ZP_07459043.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432065|gb|EFM35042.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 273 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 53/206 (25%), Positives = 98/206 (47%), Gaps = 12/206 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFA-EVKANGD 55 M K FF+S L+I F+ + + + DI+KRG L G+ + F + G Sbjct: 10 MKKKFFLS--ALLISLFSLVAAKPVQADTSVADIQKRGELVVGVKQDVPNFGYKDPKTGT 67 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + G + D + ++ + K++Y+P+ A+ R L ++Q+D+ +T+ E Sbjct: 68 YSGIETDLAKMVADEL---KVKVRYVPVTAQTRGPLLDNEQVDM--DIATFTITDERKKL 122 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F Y D GF+++K I S+ L+G +I V G+ T+ + + K ++ + + Sbjct: 123 YNFTSPYYTDASGFLVNKSANIKSIEDLNGKTIGVAQGSITQRLITELGKKKDLTFKFVE 182 Query: 176 FERVEEIDAAYRAHRCDAYTGDISAL 201 E+ + AHR DA++ D S L Sbjct: 183 LGSYPELITSLHAHRIDAFSVDRSIL 208 >gi|126433143|ref|YP_001068834.1| extracellular solute-binding protein [Mycobacterium sp. JLS] gi|126232943|gb|ABN96343.1| amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium sp. JLS] Length = 331 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 18/210 (8%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTG--LVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 F T +A++ I++RG L G++ G L F + GD GFDVD ++ IF Sbjct: 78 FPTRAEADAAV-AYIRERGRLIVGLDIGSNLFSFRD-PITGDITGFDVDIAGEIARDIFG 135 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG-QGFIMH 132 P+++ Y L++ +R +ALQ+ Q+D++ + T R+ +G + Y + Q + Sbjct: 136 SPAQVDYRILSSADRIVALQNNQVDVVVKTMTITCERKKKVGFS---TVYLNADQRILAP 192 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA--AYRAHR 190 + I+ + LSG +CV GTT+ + + PI+ V D A + + Sbjct: 193 RDSAITRAADLSGRRVCVVKGTTS------LRRVQQISPPPIIVSTVTWADCLVALQQRQ 246 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDI 220 DA + D + L L + P H++ P + Sbjct: 247 VDAVSTDDAILAGLVAQD--PYLHIVGPSM 274 >gi|308183276|ref|YP_003927403.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter pylori PeCan4] gi|308065461|gb|ADO07353.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter pylori PeCan4] Length = 277 Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 63/237 (26%), Positives = 108/237 (45%), Gaps = 16/237 (6%) Query: 10 LCLIILFFTSFSTNASILGD----IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 L LI L F++ S + D IK+RG LK G+ + F V + G ++G+DV + Sbjct: 14 LVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGYDVVIAK 73 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ + D +KI+++P+ A R L++ ++DI+ N T RE + A +P Y Sbjct: 74 RMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKVVDFA-KP--YMK 130 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 ++ K I ++ +L + V GTT + YF + + FE+ E A Sbjct: 131 VALGVISKDGVIKNIEELKDKELIVNKGTTADF----YFTKNYPNIKLLKFEQNTETFLA 186 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT---EWYN 239 ++ A D + L A P + + + K +APAI +G+ EW N Sbjct: 187 LLNNKATALAHDNTLLLA--WAKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLEWLN 241 >gi|307637843|gb|ADN80293.1| Aminoacid ABC transporter binding protein [Helicobacter pylori 908] Length = 277 Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 63/237 (26%), Positives = 108/237 (45%), Gaps = 16/237 (6%) Query: 10 LCLIILFFTSFSTNASILGD----IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 L LI L F++ S + D IK+RG LK G+ + F V + G+++G+DV + Sbjct: 14 LVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGNYQGYDVVIAK 73 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ + D +KI+++P+ A R L++ ++DI+ N T RE + A P Y Sbjct: 74 RMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKVVDFA-NP--YMK 130 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 ++ K I ++ +L + V GTT + YF + + FE+ E A Sbjct: 131 VALGVISKDGIIKNIEELKNKELIVNKGTTADF----YFTKNYPNIKLLKFEQNTETFLA 186 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT---EWYN 239 ++ A D + L A P + + + K +APAI +G+ EW N Sbjct: 187 LLNNKATALAHDNTLLLA--WVKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLEWLN 241 >gi|208435066|ref|YP_002266732.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter pylori G27] gi|208432995|gb|ACI27866.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter pylori G27] Length = 277 Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 63/237 (26%), Positives = 108/237 (45%), Gaps = 16/237 (6%) Query: 10 LCLIILFFTSFSTNASILGD----IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 L LI L F++ S + D IK+RG LK G+ + F V + G ++G+DV + Sbjct: 14 LVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGQYQGYDVVIAK 73 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ + D +KI+++P+ A R L++ ++DI+ N T RE + A +P Y Sbjct: 74 RMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKVVDFA-KP--YMK 130 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 ++ K I ++ +L + V GTT + YF + + FE+ E A Sbjct: 131 VALGVISKDGVIKNIEELKDKELIVNKGTTADF----YFTKNYPNIKLLKFEQNTETFLA 186 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT---EWYN 239 ++ A D + L A P + + + K +APAI +G+ EW N Sbjct: 187 LLNNKATALAHDNTLLLA--WAKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLEWLN 241 >gi|317153800|ref|YP_004121848.1| family 3 extracellular solute-binding protein [Desulfovibrio aespoeensis Aspo-2] gi|316944051|gb|ADU63102.1| extracellular solute-binding protein family 3 [Desulfovibrio aespoeensis Aspo-2] Length = 268 Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 57/241 (23%), Positives = 109/241 (45%), Gaps = 15/241 (6%) Query: 6 FVSILCLIILF-FTSFSTNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVD 62 + +L L++ F F + NA + D+K RG L CG+ + L GF + + G D+D Sbjct: 4 LIVVLALVLSFVFGVAAANAGKIEDVKARGVLVCGVKDSVNLFGFVDPDTK-ELVGLDID 62 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 C+ ++ + K ++ + + R L +DIL+ R+ + + IT Sbjct: 63 VCKYIADKL---GVKTEFKVVTSSNRIPMLVQGSVDILAATMTHKFSRDEQIDFS---IT 116 Query: 123 YF-DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 YF DGQ ++ K GI S + L+ + G+T+E + + A + I ++ + Sbjct: 117 YFMDGQKLLVEKGAGIKSTADLANKKVGTVKGSTSEKNIKNAQPASQV----ISYDEYPQ 172 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A + + A T D L LK +D P + I+ + + P + + D+++ + V Sbjct: 173 AFMALKQGKVVAVTTDSGILAGLKAGDDNPDKWEIVGEFFASEPYGLGVPENDSKFRDFV 232 Query: 242 S 242 + Sbjct: 233 N 233 >gi|284033844|ref|YP_003383775.1| extracellular solute-binding protein family 3 protein [Kribbella flavida DSM 17836] gi|283813137|gb|ADB34976.1| extracellular solute-binding protein family 3 [Kribbella flavida DSM 17836] Length = 326 Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 40/141 (28%), Positives = 73/141 (51%), Gaps = 3/141 (2%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 S + IK++G L+ GI+ + G +GFD+D R ++ AIF DP+K++ + + Sbjct: 77 STMAKIKQQGRLRAGISADSLNLGSRNPITGAIEGFDIDMVREVARAIFGDPNKVELVVI 136 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 ++ +R LQ +DI++RN R +AF Y GQ ++ + +++ L Sbjct: 137 SSPQRIPVLQQNTVDIVARNMTINCARWQQ--IAFSAEYYRSGQKVLVQRDSTARTLADL 194 Query: 144 SGASICVQAGTTTELTLADYF 164 G +IC AG+T+ L ++ Sbjct: 195 PGRTICAPAGSTSLDNLKKFY 215 >gi|157415241|ref|YP_001482497.1| surface antigen, CjaA [Campylobacter jejuni subsp. jejuni 81116] gi|283956380|ref|ZP_06373860.1| surface antigen, CjaA [Campylobacter jejuni subsp. jejuni 1336] gi|157386205|gb|ABV52520.1| surface antigen, CjaA [Campylobacter jejuni subsp. jejuni 81116] gi|283792100|gb|EFC30889.1| surface antigen, CjaA [Campylobacter jejuni subsp. jejuni 1336] gi|307747883|gb|ADN91153.1| Surface antigen, CjaA [Campylobacter jejuni subsp. jejuni M1] gi|315932110|gb|EFV11053.1| surface antigen, CjaA [Campylobacter jejuni subsp. jejuni 327] Length = 279 Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 55/227 (24%), Positives = 104/227 (45%), Gaps = 12/227 (5%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 S S + L IK+ G ++ G+ F V G+ +G+D+ + ++ +F D +K Sbjct: 23 NSDSKTLNSLDKIKQNGVIRIGVFGDKPPFGYVDEKGNNQGYDIALAKRIAKELFGDENK 82 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKK 135 +Q++ + A R L+S ++DI+ N T R ++ L + + G + K Sbjct: 83 VQFVLVEAANRVEFLKSNKVDIILANFTQTPQRAEQVDFCLPYMKVAL----GVAVPKDS 138 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I+SV L ++ + GTT + YF + + +++ E AA R DA + Sbjct: 139 NITSVEDLKDKTLLLNKGTTADA----YFTQNYPDIKTLKYDQNTETFAALMDKRGDALS 194 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 D + L+A D P + + ++ +K +APA+ +GD E + Sbjct: 195 HDNTLLFA--WVKDHPDFKMAIKELGNKDVIAPAVKKGDKELKEFID 239 >gi|317011370|gb|ADU85117.1| glutamine ABC transporter, periplasmic glutamine-binding protein (glnH) [Helicobacter pylori SouthAfrica7] Length = 277 Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 63/237 (26%), Positives = 108/237 (45%), Gaps = 16/237 (6%) Query: 10 LCLIILFFTSFSTNASILGD----IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 L LI L F + S + D IK+RG LK G+ + F V + G ++G+DV + Sbjct: 14 LVLIALVFNACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGQYQGYDVVIAK 73 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ + D +KI+++P+ A R L++ ++DI+ N T RE + A +P Y Sbjct: 74 RMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREAVVDFA-KP--YMK 130 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 ++ K I ++ +L + V GTT + YF + + FE+ E A Sbjct: 131 VALGVISKDGVIKNIEELKDKELIVNKGTTADF----YFTKNYPNIKLLKFEQNTETFLA 186 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT---EWYN 239 ++ A + D + L A P + + + K +APAI +G+ EW N Sbjct: 187 LLNNKAIALSHDNTLLLA--WAKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLEWLN 241 >gi|319948590|ref|ZP_08022716.1| glutamine-binding protein GlnH [Dietzia cinnamea P4] gi|319437740|gb|EFV92734.1| glutamine-binding protein GlnH [Dietzia cinnamea P4] Length = 359 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 41/130 (31%), Positives = 70/130 (53%), Gaps = 7/130 (5%) Query: 30 IKKRGFLKCGINTG--LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 I +RG L G++ G L F + A+G GFDVD R +++ IF DP ++++ L + Sbjct: 111 ILQRGRLIVGLDQGSNLFSFRD-PASGQLTGFDVDLAREIAADIFGDPRQVEFRSLTSAN 169 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG-QGFIMHKKKGISSVSQLSGA 146 R AL++ Q+D++ R+ T R + + + Y+ Q + + GI+ + L G Sbjct: 170 RLEALENDQVDVVIRSMSITCARRERVTFS---VPYYQAYQRVLTVRGSGITEIEHLEGK 226 Query: 147 SICVQAGTTT 156 +CV AGTT+ Sbjct: 227 RVCVAAGTTS 236 >gi|298735821|ref|YP_003728346.1| putative glutamine transport system substrate-binding protein [Helicobacter pylori B8] gi|298355010|emb|CBI65882.1| putative glutamine transport system substrate-binding protein [Helicobacter pylori B8] Length = 277 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 63/237 (26%), Positives = 108/237 (45%), Gaps = 16/237 (6%) Query: 10 LCLIILFFTSFSTNASILGD----IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 L LI L F++ S + D IK+RG LK G+ + F V + G ++G+DV + Sbjct: 14 LVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGYDVVIAK 73 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ + D +KI+++P+ A R L++ ++DI+ N T RE + A +P Y Sbjct: 74 RMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKVVDFA-KP--YMK 130 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 ++ K I ++ +L + V GTT + YF + + FE+ E A Sbjct: 131 VALGVISKDGVIKNIEELKDKELIVNKGTTADF----YFTKNYPNIKLLKFEQNTETFLA 186 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT---EWYN 239 ++ A D + L A P + + + K +APAI +G+ EW N Sbjct: 187 LLNNKATALAHDNTLLLA--WIKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLEWLN 241 >gi|89897023|ref|YP_520510.1| hypothetical protein DSY4277 [Desulfitobacterium hafniense Y51] gi|219667104|ref|YP_002457539.1| extracellular solute-binding protein family 3 [Desulfitobacterium hafniense DCB-2] gi|89336471|dbj|BAE86066.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219537364|gb|ACL19103.1| extracellular solute-binding protein family 3 [Desulfitobacterium hafniense DCB-2] Length = 278 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 54/174 (31%), Positives = 80/174 (45%), Gaps = 5/174 (2%) Query: 30 IKKRGFLKCGINTGLVGFA--EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 IK RG L G+ + GF + K N GF++D +AL+ IF DPSKI+ + AK Sbjct: 51 IKDRGALSVGVKVDVPGFGYKDPKTN-VIDGFEIDLVKALAEEIFGDPSKIKLQAVTAKT 109 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 R L S +D++ +T+ + F Y DG G ++ K G S+ L G + Sbjct: 110 RGPLLDSGDVDMVVAT--FTITEDRKKSYNFSDPYYIDGVGLLVKKAPGYKSLKDLDGKN 167 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 I V T++ + +K F EI AA + R DA++ D S L Sbjct: 168 IGVAQSATSKTAVQAEADKLGVKVKFQEFATYPEIKAALDSGRVDAFSVDRSIL 221 >gi|325996441|gb|ADZ51846.1| Aminoacid ABC transporter, binding protein precursor [Helicobacter pylori 2018] gi|325998030|gb|ADZ50238.1| Amino acid ABC transporter binding protein [Helicobacter pylori 2017] Length = 277 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 63/237 (26%), Positives = 108/237 (45%), Gaps = 16/237 (6%) Query: 10 LCLIILFFTSFSTNASILGD----IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 L LI L F++ S + D IK+RG LK G+ + F V + G+++G+DV + Sbjct: 14 LVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGNYQGYDVVIAK 73 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ + D +KI+++P+ A R L++ ++DI+ N T RE + A P Y Sbjct: 74 RMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKVVDFA-NP--YMK 130 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 ++ K I ++ +L + V GTT + YF + + FE+ E A Sbjct: 131 VALGVISKDGIIKNIEELKDKELIVNKGTTADF----YFTKNYPNIKLLKFEQNTETFLA 186 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT---EWYN 239 ++ A D + L A P + + + K +APAI +G+ EW N Sbjct: 187 LLNNKATALAHDNTLLLA--WVKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLEWLN 241 >gi|251796879|ref|YP_003011610.1| extracellular solute-binding protein family 3 [Paenibacillus sp. JDR-2] gi|247544505|gb|ACT01524.1| extracellular solute-binding protein family 3 [Paenibacillus sp. JDR-2] Length = 282 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 63/227 (27%), Positives = 107/227 (47%), Gaps = 13/227 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 S S +AS L IK RG L G+ +T L G + A+G +GFDVD +AL+ I D + Sbjct: 39 SASGSASALESIKNRGKLVVGVKYDTKLFGLKD-PASGSVEGFDVDIAKALAKEILGDET 97 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 KI+ + +K R L + ID++ T+ E + F + + GQ ++ K Sbjct: 98 KIELKEVTSKTRIPMLNNNDIDMIVAT--MTITEERKKEVDFSDVYFKAGQSLLVKKGSP 155 Query: 137 ISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I S+ + G + G+T+ D KA + F+ ++ +A +A + D T Sbjct: 156 IKSIDDIKKGTKVLAVKGSTS----VDNIKAKAPDATILEFDNYQDAFSALKAGQGDTLT 211 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 D + LY + + + P+ V+ + + P AI +G T+ N V+ Sbjct: 212 TDNAILYGMAVQD--PNYEVV-GEPFTDEPYGIAIKKGATDLLNSVN 255 >gi|315638784|ref|ZP_07893956.1| ABC superfamily ATP binding cassette transporter, binding protein [Campylobacter upsaliensis JV21] gi|315481002|gb|EFU71634.1| ABC superfamily ATP binding cassette transporter, binding protein [Campylobacter upsaliensis JV21] Length = 282 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 54/238 (22%), Positives = 108/238 (45%), Gaps = 12/238 (5%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 F + + + + S + + + IK G +K G+ F V G +G+D+ F + Sbjct: 14 FTAFVAVFLAACDSSESGVNSIERIKNAGVVKIGVFGDKPPFGYVDEKGANQGYDIIFAK 73 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITY 123 ++ + D +K++++ + A R L+S ++DI+ N T R ++ L + + Sbjct: 74 RIAKELLGDENKVEFVLVEAANRVEFLKSNKVDIILANFTQTPERAEQVDFALPYMKVAL 133 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 G ++ + I SV L ++ + GTT + YF + + F++ E Sbjct: 134 ----GVVVPEDSEIKSVEDLKDKTLILNKGTTADA----YFTKNYADIKTLKFDQNTETF 185 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 AA R DA D + L+A +RP V++ ++ ++ +APA+ +GD E + Sbjct: 186 AALMDKRGDALAHDNTLLFA--WVKERPDYKVVIKELGNQDVIAPAVKKGDKELKEFI 241 >gi|225076166|ref|ZP_03719365.1| hypothetical protein NEIFLAOT_01198 [Neisseria flavescens NRL30031/H210] gi|224952509|gb|EEG33718.1| hypothetical protein NEIFLAOT_01198 [Neisseria flavescens NRL30031/H210] Length = 287 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 62/232 (26%), Positives = 109/232 (46%), Gaps = 16/232 (6%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 S+ A+ + IK++G ++ G+ F V ANG +GFDV+ + L+ + P K+++ Sbjct: 38 SSGAATVAAIKEKGVIRIGVFGDKPPFGYVDANGKNQGFDVEIAKDLAKDLLGSPDKVEF 97 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + A R ++S ++D++ N +T E + + F G + K K I+ V Sbjct: 98 VLTEAANRVEYVRSGKVDLILAN--FTKTPERAEAVDFADPYMKVALGVVSPKDKPITDV 155 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV----FERVEEIDAAYRAHRCDAYTG 196 +QL ++ V GTT + A K HP V F++ E A + R A Sbjct: 156 AQLKDQTLLVNKGTTAD--------AFFTKSHPEVKLLKFDQNTETFDALKDGRGVALAH 207 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 D + L+A N P+ V + ++ +APA+ +G+T+ N V+ AM Sbjct: 208 DNALLWAWAKEN--PNFEVAIGNLGPAEFIAPAVQKGNTDLLNWVNGEIAAM 257 >gi|6119888|gb|AAF04271.1|AF181878_1 amino acid binding protein [Helicobacter pylori] Length = 287 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 63/237 (26%), Positives = 107/237 (45%), Gaps = 16/237 (6%) Query: 10 LCLIILFFTSFSTNASILGD----IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 L LI L F + S + D IK+RG LK G+ + F V + G ++G+DV + Sbjct: 24 LVLIALVFNACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGYDVIIAK 83 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ + D +KI+++P+ A R L++ ++DI+ N T RE + A +P Y Sbjct: 84 RMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKVVDFA-KP--YMK 140 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 ++ K I ++ +L + V GTT + YF + + FE+ E A Sbjct: 141 VALGVISKDGVIKNIEELKDKELIVNKGTTADF----YFTKNYPDIKLLKFEQNTETFLA 196 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT---EWYN 239 ++ A D + L A P + + + K +APAI +G+ EW N Sbjct: 197 LLNNKATALAHDNTLLLA--WAKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLEWLN 251 >gi|331266846|ref|YP_004326476.1| ABC transporter, substrate-binding protein,polar amino acid transport system; glutamine transport,putative [Streptococcus oralis Uo5] gi|326683518|emb|CBZ01136.1| ABC transporter, substrate-binding protein,polar amino acid transport system; glutamine transport,putative [Streptococcus oralis Uo5] Length = 264 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 55/205 (26%), Positives = 98/205 (47%), Gaps = 10/205 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFA-EVKANGDW 56 M K FF+S L LI LF + + + + DI+KRG L G+ + F + G + Sbjct: 1 MKKKFFLSAL-LISLFGLAAAKPVQADTSVADIQKRGELVVGVKQDVPNFGYKDPKTGTY 59 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G + D + ++ + K++Y+P+ A+ R L ++Q+D+ +T+ E Sbjct: 60 SGIETDLAKMIADEL---KVKVRYVPVTAQTRGPLLDNEQVDM--DIATFTITDERKKLY 114 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F Y D GF+++K I S+ L+G +I V G+ T+ + + K + + + Sbjct: 115 NFTSPYYTDASGFLVNKSANIKSIEDLNGKTIGVAQGSITQRLITELGKKKGLTFKFVEL 174 Query: 177 ERVEEIDAAYRAHRCDAYTGDISAL 201 E+ + AHR DA++ D S L Sbjct: 175 GSYPELITSLHAHRIDAFSVDRSIL 199 >gi|242280829|ref|YP_002992958.1| extracellular solute-binding protein family 3 [Desulfovibrio salexigens DSM 2638] gi|242123723|gb|ACS81419.1| extracellular solute-binding protein family 3 [Desulfovibrio salexigens DSM 2638] Length = 273 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 61/223 (27%), Positives = 104/223 (46%), Gaps = 15/223 (6%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 I K ++ GI T + A A +W GFDVD ++ + KI +P+N K R Sbjct: 30 IMKDKVIRVGIMTDSIPGAFYNAKKEWVGFDVDIANEIAKRL---GVKIDQVPVNNKTRI 86 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITY-FDGQGFIMHKKKGISSVSQLSGASI 148 LQ +ID N R+ S+ + ITY FDGQ + K K S++ G + Sbjct: 87 GFLQQGRIDASVSNMTHKRSRDKSIDFS---ITYFFDGQKMLAPKGK-FSTLKDFVGKKV 142 Query: 149 CVQAGTTTELTLADYFKA-HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL--YALK 205 V GTT+EL + + K+ + I +++ E A + R DA++ D + L YA + Sbjct: 143 AVMQGTTSELNVKNLLKSLGDAAPKVISYQKESECFQALQMGRVDAWSTDSTILLGYAAQ 202 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 + P ++ ++ D S P +++ D++ + V++ M Sbjct: 203 V----PGKYELVGDFFSNEPYGIGLVEDDSKLRDAVNFALQDM 241 >gi|188527957|ref|YP_001910644.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter pylori Shi470] gi|188144197|gb|ACD48614.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter pylori Shi470] Length = 277 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 67/266 (25%), Positives = 120/266 (45%), Gaps = 20/266 (7%) Query: 10 LCLIILFFTSFSTNASILGD----IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 L LI L F++ S + D IK+RG LK G+ + F V + G ++G+DV + Sbjct: 14 LVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGYDVIIAK 73 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ + D +KI+++P+ A R L++ ++DI+ N T RE + A +P Y Sbjct: 74 RMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKVVDFA-KP--YMK 130 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 ++ K I ++ +L + V GTT + YF + + FE+ E A Sbjct: 131 VALGVISKDGVIKNIEELKDKELIVNKGTTADF----YFTKNYPNIKLLKFEQNTETFLA 186 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 ++ A D + L A T P + + + K +APAI +G+ + ++ W Sbjct: 187 LLDNKAIALAHDNTLLLA--WTKQHPEFKLGITSLGDKDVIAPAIKKGNPK---LLEWLD 241 Query: 246 YAMVTAEELGITQKNINQVSKDTTNP 271 M + I+ + + K+T P Sbjct: 242 NEMDSL----ISSDFLKEAYKETLEP 263 >gi|297380350|gb|ADI35237.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter pylori v225d] Length = 277 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 63/237 (26%), Positives = 109/237 (45%), Gaps = 16/237 (6%) Query: 10 LCLIILFFTSFSTNASILGD----IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 L LI L F++ S + D IK+RG LK G+ + F V + G ++G+DV + Sbjct: 14 LVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGYDVVIAK 73 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ + D +KI+++P+ A R L++ ++DI+ N T RE + A +P Y Sbjct: 74 RMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKVVDFA-KP--YMK 130 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 ++ K I ++ +L + V GTT + YF + + FE+ E A Sbjct: 131 VALGVISKDGVIKNIEELKDKELIVNKGTTADF----YFTKNYPNIKLLKFEQNTETFLA 186 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT---EWYN 239 ++ A D + L A T P + + + K +APAI +G+ EW + Sbjct: 187 LLNNKAIALAHDNTLLLA--WTKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLEWLD 241 >gi|261377618|ref|ZP_05982191.1| CjaA protein [Neisseria cinerea ATCC 14685] gi|269146371|gb|EEZ72789.1| CjaA protein [Neisseria cinerea ATCC 14685] Length = 284 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 62/235 (26%), Positives = 110/235 (46%), Gaps = 16/235 (6%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 +S S A+ + IK++G ++ G+ F V ANG +GFDV+ + L+ + P K Sbjct: 32 SSQSGGAATVASIKEKGVIRIGVFGDKPPFGYVDANGKNQGFDVEIAKDLAKDLLGSPDK 91 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++++ A R ++S ++D++ N +T E + + F G + K K I Sbjct: 92 VEFVLTEAANRVEYVRSGKVDLILAN--FTKTPERAEAVDFADPYMKVALGVVSPKDKPI 149 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV----FERVEEIDAAYRAHRCDA 193 + ++QL ++ V GTT + A K HP V F++ E A + R A Sbjct: 150 TDIAQLKDQTLLVNKGTTAD--------AFFTKSHPEVKLLKFDQNTETFDALKDGRGVA 201 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 D + L+A N P+ V + ++ +APA+ +G+T+ N V+ AM Sbjct: 202 LAHDNALLWAWAKEN--PNFEVAIGNLGPAEFIAPAVQKGNTDLLNWVNGEIAAM 254 >gi|226362801|ref|YP_002780579.1| ABC transporter substrate-binding protein [Rhodococcus opacus B4] gi|226241286|dbj|BAH51634.1| putative ABC transporter substrate-binding protein [Rhodococcus opacus B4] Length = 336 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 61/222 (27%), Positives = 106/222 (47%), Gaps = 12/222 (5%) Query: 25 SILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 S L +I RG L GI NT L F + G GFDVD ++ +F DP+++++ Sbjct: 91 SALAEITARGRLVVGIDQNTNLFSFRD-PTTGMLMGFDVDVAGEMARDLFGDPARVEFRL 149 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 L + +RF AL+ K +D++ ++T T+ E S +AF + + Q ++ K GIS Sbjct: 150 LTSGDRFDALEKKAVDLVVKST--TITCERSERVAFSTVYFQAYQRLLVPKVSGISGPED 207 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+G +C A TT+ T+ A + + ++ + R DA + D S L Sbjct: 208 LAGKRVCTVADTTSLDTVRRVQPAATI----VTVPDWDDCLVTLQQRRADAASTDDSILA 263 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 L + P+ ++ P + S+ P + +G+ + V+ T Sbjct: 264 GLAAQD--PNLEIVGPPLHSE-PYGIGVNKGNEDLVRFVNGT 302 >gi|169631301|ref|YP_001704950.1| glutamine-binding protein GlnH [Mycobacterium abscessus ATCC 19977] gi|169243268|emb|CAM64296.1| Probable glutamine-binding protein GlnH [Mycobacterium abscessus] Length = 327 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 15/204 (7%) Query: 21 STNASILGDIKKRGFLKCGINTG--LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 + N + I+KRG L G++ G L F + G+ GFDVD +S IF P ++ Sbjct: 78 AANDEAVAAIRKRGRLVVGLDIGSNLFSFRD-PITGELTGFDVDIAGEVSRDIFGTPERV 136 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 +Y L++ +R AL++ +DI+ + T R + F + + Q + + GI+ Sbjct: 137 EYRILSSADRVAALKNSTVDIVVKTMTITCARRKEVN--FSSVYLMNYQRILTSRDSGIT 194 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA--AYRAHRCDAYTG 196 + LSG +C GTT+ + + P++ V D A + + DA + Sbjct: 195 NAQDLSGRRVCAARGTTS------LNRLSQITPPPVIMSVVTWADCLVALQQRQVDAVST 248 Query: 197 DISALYALKLTNDRPSEHVILPDI 220 D S L L ++ D P H+I P++ Sbjct: 249 DDSILAGL-MSQD-PYLHIIGPNM 270 >gi|322377820|ref|ZP_08052309.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus sp. M334] gi|321281243|gb|EFX58254.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus sp. M334] Length = 296 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 56/205 (27%), Positives = 97/205 (47%), Gaps = 10/205 (4%) Query: 1 MYKDFFVSILCLIILF---FTSFSTNASILGDIKKRGFLKCGINTGLVGFA-EVKANGDW 56 M K FF+S L LI LF T + + DI+KRG L G+ + F + G + Sbjct: 33 MKKKFFLSAL-LISLFGLAATKPVQADTSVADIQKRGELVVGVKQDVPNFGYKDPKTGTY 91 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G + D + ++ + K++Y+P+ A+ R L ++Q+D+ +T+ E Sbjct: 92 SGIETDLAKMVADEL---KVKVRYVPVTAQTRGPLLDNEQVDM--DIATFTITDERKKLY 146 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F Y D GF+++K I S+ L+G +I V G+ T+ + + K + + + Sbjct: 147 NFTSPYYTDASGFLVNKSAKIKSIEDLNGKTIGVAQGSITQRLITELGKKKGLTFKFVEL 206 Query: 177 ERVEEIDAAYRAHRCDAYTGDISAL 201 E+ + AHR DA++ D S L Sbjct: 207 GSYPELITSLHAHRIDAFSVDRSIL 231 >gi|57237809|ref|YP_179057.1| surface antigen, CjaA [Campylobacter jejuni RM1221] gi|205356696|ref|ZP_03223457.1| putative amino-acid transporter periplasmic solute binding protein [Campylobacter jejuni subsp. jejuni CG8421] gi|57166613|gb|AAW35392.1| surface antigen, CjaA [Campylobacter jejuni RM1221] gi|205345434|gb|EDZ32076.1| putative amino-acid transporter periplasmic solute binding protein [Campylobacter jejuni subsp. jejuni CG8421] gi|315058426|gb|ADT72755.1| Putative amino-acid transporter periplasmic solute-binding protein [Campylobacter jejuni subsp. jejuni S3] Length = 279 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 55/227 (24%), Positives = 104/227 (45%), Gaps = 12/227 (5%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 S S + L IK+ G ++ G+ F V G+ +G+D+ + ++ +F D +K Sbjct: 23 NSDSKTLNSLDKIKQNGVVRIGVFGDKPPFGYVDEKGNNQGYDIALAKRIAKELFGDENK 82 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKK 135 +Q++ + A R L+S ++DI+ N T R ++ L + + G + K Sbjct: 83 VQFVLVEAANRVEFLKSNKVDIILANFTQTPQRAEQVDFCLPYMKVAL----GVAVPKDS 138 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I+SV L ++ + GTT + YF + + +++ E AA R DA + Sbjct: 139 NITSVEDLKDKTLLLNKGTTADA----YFTQNYPNIKTLKYDQNTETFAALMDKRGDALS 194 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 D + L+A D P + + ++ +K +APA+ +GD E + Sbjct: 195 HDNTLLFA--WVKDHPDFKMGIKELGNKDVIAPAVKKGDKELKEFID 239 >gi|86151024|ref|ZP_01069240.1| bacterial extracellular solute-binding proteins, family 3 [Campylobacter jejuni subsp. jejuni 260.94] gi|148926105|ref|ZP_01809791.1| putative amino-acid transporter periplasmic solute-binding protein [Campylobacter jejuni subsp. jejuni CG8486] gi|85842194|gb|EAQ59440.1| bacterial extracellular solute-binding proteins, family 3 [Campylobacter jejuni subsp. jejuni 260.94] gi|145845584|gb|EDK22676.1| putative amino-acid transporter periplasmic solute-binding protein [Campylobacter jejuni subsp. jejuni CG8486] gi|284926212|gb|ADC28564.1| putative amino-acid transporter periplasmic solute-binding protein [Campylobacter jejuni subsp. jejuni IA3902] Length = 279 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 55/227 (24%), Positives = 104/227 (45%), Gaps = 12/227 (5%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 S S + L IK+ G ++ G+ F V G+ +G+D+ + ++ +F D +K Sbjct: 23 NSDSKTLNSLDKIKQNGVVRIGVFGDKPPFGYVDEKGNNQGYDIALAKRIAKELFGDENK 82 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKK 135 +Q++ + A R L+S ++DI+ N T R ++ L + + G + K Sbjct: 83 VQFVLVEAANRVEFLKSNKVDIILANFTQTPQRAEQVDFCLPYMKVAL----GVAVPKDS 138 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I+SV L ++ + GTT + YF + + +++ E AA R DA + Sbjct: 139 NITSVEDLKDKTLLLNKGTTADA----YFTQNYPNIKTLKYDQNTETFAALMDKRGDALS 194 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 D + L+A D P + + ++ +K +APA+ +GD E + Sbjct: 195 HDNTLLFA--WVKDHPDFKMGIKELGNKDVIAPAVKKGDKELKEFID 239 >gi|146319016|ref|YP_001198728.1| glutamine ABC transporter substrate-binding protein [Streptococcus suis 05ZYH33] gi|146321225|ref|YP_001200936.1| glutamine ABC transporter substrate-binding protein [Streptococcus suis 98HAH33] gi|253752082|ref|YP_003025223.1| putative glutamine-binding protein precursor [Streptococcus suis SC84] gi|253753907|ref|YP_003027048.1| glutamine-binding protein precursor [Streptococcus suis P1/7] gi|253755218|ref|YP_003028358.1| glutamine-binding protein precursor [Streptococcus suis BM407] gi|145689822|gb|ABP90328.1| ABC transporter substrate-binding protein - glutamine transport/Major cell binding factor precursor [Streptococcus suis 05ZYH33] gi|145692031|gb|ABP92536.1| ABC transporter substrate-binding protein - glutamine transport/Major cell binding factor precursor [Streptococcus suis 98HAH33] gi|251816371|emb|CAZ52002.1| putative glutamine-binding protein precursor [Streptococcus suis SC84] gi|251817682|emb|CAZ55430.1| putative glutamine-binding protein precursor [Streptococcus suis BM407] gi|251820153|emb|CAR46491.1| putative glutamine-binding protein precursor [Streptococcus suis P1/7] gi|319758449|gb|ADV70391.1| glutamine ABC transporter substrate-binding protein [Streptococcus suis JS14] Length = 279 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 47/181 (25%), Positives = 88/181 (48%), Gaps = 6/181 (3%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQY 80 TN+ + I RG L+ G+ + F + G+++G ++D R ++ + D I++ Sbjct: 39 TNSDQVQAIIDRGVLRVGVKQDVPNFGYKNPDTGEFEGMEIDIARKIADELGVD---IEF 95 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 P+ A+ R L + Q+D++ +T+ E L F Y D GF+++K GI + Sbjct: 96 TPVTAQTRGPLLDNSQVDMVIAT--FTITEERKLLYNFTTPYYTDAVGFLVNKDSGIKTF 153 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + L G +I V G+ T +++ + + + E+ + RAHR DA++ D S Sbjct: 154 TDLDGKTIGVAQGSITRTLISELADKYGITVNFAELGSYPELSVSLRAHRTDAFSVDQSI 213 Query: 201 L 201 L Sbjct: 214 L 214 >gi|308277190|gb|ADO27089.1| ABC-type amino acid transport [Corynebacterium pseudotuberculosis I19] Length = 322 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 70/129 (54%), Gaps = 7/129 (5%) Query: 30 IKKRGFLKCGINTG--LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 I++RG L GI+ L+ F A G+ +GF+VD R +S IF DP+KI + ++A Sbjct: 74 IRERGRLMVGIDQSQNLLSFRNT-ATGELQGFEVDLAREISRDIFGDPTKIDFRYIDADT 132 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ-GFIMHKKKGISSVSQLSGA 146 AL++ +D+ R+ T R+ + F YF G+ ++HK GISSV L G Sbjct: 133 WVKALENNDVDLAIRSISITRGRQDQV---FFSTPYFSGKTKLLVHKNSGISSVDDLPGK 189 Query: 147 SICVQAGTT 155 ++C A +T Sbjct: 190 TVCATAEST 198 >gi|308071222|ref|YP_003872827.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain protein [Paenibacillus polymyxa E681] gi|305860501|gb|ADM72289.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain protein [Paenibacillus polymyxa E681] Length = 291 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 66/255 (25%), Positives = 118/255 (46%), Gaps = 21/255 (8%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 +S S + + DIKK G ++ G+ F V + G +GFDV + + + D SK Sbjct: 33 SSGSAKFASIEDIKKNGKIRIGVFADKPPFGYVDSEGKNQGFDVYIAKRFAKDLLGDESK 92 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA--FRPITYFDGQGFIMHKKK 135 ++++ ++A R L+S ++DI+ N T R+ + A + +++ G + Sbjct: 93 VEFVLVDAASRVAYLESNKVDIIMANFTVTDERKEKVDFANPYMKLSF----GIVSPDSA 148 Query: 136 GISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 I+++ QL S + V GTT E YF + + F++ EI +A + R A Sbjct: 149 PITTIDQLKNSDQKLIVAKGTTAET----YFTKNYPDIKLLKFDQYTEIFSALKDKRGAA 204 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 D + L A N P V +P + +APA+ +G+ E ++ W + + T Sbjct: 205 IANDNTELIAWAKAN--PGFTVTIPAFGGQDTIAPAVAKGNKE---LLDWINNELAT--- 256 Query: 254 LGITQKNINQVSKDT 268 LG + ++Q KDT Sbjct: 257 LG-KENFVHQAYKDT 270 >gi|86152552|ref|ZP_01070757.1| surface antigen, CjaA [Campylobacter jejuni subsp. jejuni HB93-13] gi|85843437|gb|EAQ60647.1| surface antigen, CjaA [Campylobacter jejuni subsp. jejuni HB93-13] Length = 279 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 55/227 (24%), Positives = 104/227 (45%), Gaps = 12/227 (5%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 S S + L IK+ G ++ G+ F V G+ +G+D+ + ++ +F D +K Sbjct: 23 NSDSKTLNSLDKIKQNGVVRIGVFGDKPPFGYVDEKGNNQGYDIALAKRIAKELFGDENK 82 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKK 135 +Q++ + A R L+S ++DI+ N T R ++ L + + G + K Sbjct: 83 VQFVLVEAANRVEFLKSNKVDIILANFTQTPERAEQVDFCLPYMKVAL----GVAVPKDS 138 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I+SV L ++ + GTT + YF + + +++ E AA R DA + Sbjct: 139 NITSVEDLKDKTLLLNKGTTADA----YFTQNYPNIKTLKYDQNTETFAALMDKRGDALS 194 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 D + L+A D P + + ++ +K +APA+ +GD E + Sbjct: 195 HDNTLLFA--WVKDHPDFKMGIKELGNKDVIAPAVKKGDKELKEFID 239 >gi|158321705|ref|YP_001514212.1| extracellular solute-binding protein [Alkaliphilus oremlandii OhILAs] gi|158141904|gb|ABW20216.1| extracellular solute-binding protein family 3 [Alkaliphilus oremlandii OhILAs] Length = 285 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 57/216 (26%), Positives = 102/216 (47%), Gaps = 11/216 (5%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L IK+RG ++ G+ + F V ANG+ +GFDV + + + D SK++++ + A Sbjct: 39 LDAIKERGTIRIGVFSDKAPFGYVDANGENQGFDVHIAKRFAKDLLGDESKVEFVLVEAA 98 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 R L+S ++DI+ N +T+ E + F G + I+S+ L Sbjct: 99 NRVAFLESNKVDIIMAN--FTVTEERKEKVDFANPYMKVSLGIVSPDGALITSIEDLKDQ 156 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 + V GTT + DYF ++ + + +++ E A + R A D + + A Sbjct: 157 KLIVNKGTTAQ----DYFTKNHPEIELLKYDQNTEAFEALKDLRGAALAHDNTEVLAWAK 212 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTE---WYN 239 N P V +P + ++ +APA+ +G+TE W N Sbjct: 213 GN--PGFTVGIPVLGNQDVIAPAVKKGNTELLAWIN 246 >gi|300859245|ref|YP_003784228.1| hypothetical protein cpfrc_01828 [Corynebacterium pseudotuberculosis FRC41] gi|300686699|gb|ADK29621.1| hypothetical protein cpfrc_01828 [Corynebacterium pseudotuberculosis FRC41] gi|302206936|gb|ADL11278.1| Bacterial extracellular solute-binding protein, family 3 [Corynebacterium pseudotuberculosis C231] Length = 323 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 70/129 (54%), Gaps = 7/129 (5%) Query: 30 IKKRGFLKCGINTG--LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 I++RG L GI+ L+ F A G+ +GF+VD R +S IF DP+KI + ++A Sbjct: 75 IRERGRLMVGIDQSQNLLSFRNT-ATGELQGFEVDLAREISRDIFGDPTKIDFRYIDADT 133 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ-GFIMHKKKGISSVSQLSGA 146 AL++ +D+ R+ T R+ + F YF G+ ++HK GISSV L G Sbjct: 134 WVKALENNDVDLAIRSISITRGRQDQV---FFSTPYFSGKTKLLVHKNSGISSVDDLPGK 190 Query: 147 SICVQAGTT 155 ++C A +T Sbjct: 191 TVCATAEST 199 >gi|109947011|ref|YP_664239.1| polar amino acid transport system substrate-binding protein [Helicobacter acinonychis str. Sheeba] gi|109714232|emb|CAJ99240.1| polar amino acid transport system substrate-binding protein [Helicobacter acinonychis str. Sheeba] Length = 277 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 63/238 (26%), Positives = 109/238 (45%), Gaps = 18/238 (7%) Query: 10 LCLIILFFTSFSTNASILGD----IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 L LI L F + S + D IK+RG LK G+ + F V + G ++G+DV + Sbjct: 14 LILIALVFNACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGYDVVIAK 73 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 + + D +KI+++P+ A R L++ ++D++ N T RE + A +P Y Sbjct: 74 RIVLDLLGDENKIEFIPVEASARVEFLKANKVDVIMANFTCTKEREAVVDFA-KP--YMK 130 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV-FERVEEIDA 184 ++ K I ++ +L + V GTT AD++ N + ++ FE+ E Sbjct: 131 VALGVISKDGAIKNIEELKDKELIVNKGTT-----ADFYFTKNYPHIKLLKFEQNTETFL 185 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT---EWYN 239 A + A D + L A P + + ++ K +APAI +G+ EW N Sbjct: 186 ALLKDKAIALAHDNTLLLA--WAKQHPEFKLGITNLGDKDVIAPAIKKGNPKLLEWLN 241 >gi|313144530|ref|ZP_07806723.1| amino-acid ABC transporter periplasmic solute-binding protein [Helicobacter cinaedi CCUG 18818] gi|313129561|gb|EFR47178.1| amino-acid ABC transporter periplasmic solute-binding protein [Helicobacter cinaedi CCUG 18818] Length = 286 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 56/207 (27%), Positives = 96/207 (46%), Gaps = 9/207 (4%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 IK+ G L+ G+ F + NG GFD+ + L+ + D SKI+++ A R Sbjct: 47 IKQNGVLRVGVFGDKPPFGFIDENGKNAGFDIYIAKRLAKDLLGDESKIEFILTEAASRV 106 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 L+S ++DI+ N T RE ++ A +P Y ++ I SV L G + Sbjct: 107 EFLRSNKVDIIMANFTQTKEREEAVDFA-KP--YMKVSLGVVSPNGEIKSVEDLKGKKLI 163 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V GTT ++ YF ++ + +E+ + A + R DA D + + A + N Sbjct: 164 VNKGTTADV----YFSKNHPDIELLKYEQNTQAFLALKDKRGDALAHDNTLVLAWAMEN- 218 Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTE 236 P V +P + + +APA+ +G+ E Sbjct: 219 -PGFGVGIPTLGEEDVIAPAVKKGNVE 244 >gi|224438086|ref|ZP_03659025.1| amino-acid ABC transporter periplasmic solute-binding protein [Helicobacter cinaedi CCUG 18818] Length = 275 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 56/207 (27%), Positives = 96/207 (46%), Gaps = 9/207 (4%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 IK+ G L+ G+ F + NG GFD+ + L+ + D SKI+++ A R Sbjct: 36 IKQNGVLRVGVFGDKPPFGFIDENGKNAGFDIYIAKRLAKDLLGDESKIEFILTEAASRV 95 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 L+S ++DI+ N T RE ++ A +P Y ++ I SV L G + Sbjct: 96 EFLRSNKVDIIMANFTQTKEREEAVDFA-KP--YMKVSLGVVSPNGEIKSVEDLKGKKLI 152 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V GTT ++ YF ++ + +E+ + A + R DA D + + A + N Sbjct: 153 VNKGTTADV----YFSKNHPDIELLKYEQNTQAFLALKDKRGDALAHDNTLVLAWAMEN- 207 Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTE 236 P V +P + + +APA+ +G+ E Sbjct: 208 -PGFGVGIPTLGEEDVIAPAVKKGNVE 233 >gi|15612164|ref|NP_223816.1| amino acid ABC transporter [Helicobacter pylori J99] gi|4155688|gb|AAD06672.1| AMINO ACID ABC TRANSPORTER, BINDING PROTEIN PRECURSOR [Helicobacter pylori J99] Length = 277 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 63/237 (26%), Positives = 107/237 (45%), Gaps = 16/237 (6%) Query: 10 LCLIILFFTSFSTNASILGD----IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 L LI L F + S + D IK+RG LK G+ + F V + G+++G+DV + Sbjct: 14 LVLIALVFNACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGNYQGYDVVIAK 73 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ + D +KI+++P+ A R L++ ++DI+ N T RE + A P Y Sbjct: 74 RMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKVVDFA-NP--YMK 130 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 ++ K I ++ +L + V GTT + YF + + FE+ E A Sbjct: 131 VALGVISKDGVIKNIEELKDKELIVNKGTTADF----YFTKNYPNIKLLKFEQNTETFLA 186 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT---EWYN 239 ++ A D + L A P + + + K +APAI +G+ EW N Sbjct: 187 LLNNKAIALAHDNTLLLA--WVKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLEWLN 241 >gi|239826929|ref|YP_002949553.1| extracellular solute-binding protein family 3 [Geobacillus sp. WCH70] gi|239807222|gb|ACS24287.1| extracellular solute-binding protein family 3 [Geobacillus sp. WCH70] Length = 286 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 59/227 (25%), Positives = 104/227 (45%), Gaps = 11/227 (4%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPS 76 T S + L IKKRG L G+ L F + G +GFD+D + L+ I D + Sbjct: 43 TETSGGTNTLEKIKKRGKLVVGVKYDLNLFGLKNPETGKVEGFDIDIAKGLAKKILGDEN 102 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 KI+ + +K R L + +ID + T+ E + F + + GQ ++ K Sbjct: 103 KIELKEVTSKTRIPMLNNGEIDAII--ATMTITEERKKEVDFSDVYFMAGQSLLVKKDSK 160 Query: 137 ISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I+SV L G ++ G+T+ A + + + + FE E A +A + DA T Sbjct: 161 INSVKDLKKGMTVLTAKGSTS----AQNIRKVAPEVNVLEFENYAEAFTALKAGQGDALT 216 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 D + L L + P+ + +L + ++ P A+ +GD E+ +++ Sbjct: 217 TDNALL--LGMAKQDPN-YRVLDETFTEEPYGIAVRKGDKEFLQVIN 260 >gi|32266980|ref|NP_861012.1| bifunctional adhesin/ABC transporter aspartate/glutamate-binding protein [Helicobacter hepaticus ATCC 51449] gi|32263032|gb|AAP78078.1| probable ABC-type amino-acid transporter periplasmic solute-binding protein [Helicobacter hepaticus ATCC 51449] Length = 260 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 57/194 (29%), Positives = 97/194 (50%), Gaps = 9/194 (4%) Query: 13 IILFFTSFS--TNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSS 69 + LF + F+ NA +L DIKK+ L G+ + FA + + + KGF++D + L+ Sbjct: 16 LFLFLSMFALQANAGMLEDIKKKDELVVGVKNDIPHFALLDQKTKEIKGFEIDVAKLLAK 75 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 I + +K++ + +NAK R L + ID++ +T+ E F Y D G Sbjct: 76 HILGNENKLKLVAVNAKTRGPLLDNGSIDVVI--ATFTITPERKRTYNFSEPYYKDSVGL 133 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK--AHNMKYHPIVFERVEEIDAAYR 187 ++ K+KG S++ + A+I V T++ +A K N+K++ F I AA Sbjct: 134 LVLKEKGYKSLADMKDATIGVAQAATSKRAIASAAKKLGINVKFNE--FPDYPSIKAALD 191 Query: 188 AHRCDAYTGDISAL 201 A R DA++ D S L Sbjct: 192 AKRIDAFSVDKSIL 205 >gi|224966982|dbj|BAH28861.1| ABC transporter protein [Lactobacillus mucosae] Length = 285 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 64/241 (26%), Positives = 107/241 (44%), Gaps = 14/241 (5%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 N S + IKKRG++K + L + V +G G+D+ R ++ D K +++ Sbjct: 38 NQSSVSAIKKRGYIKIAVFGDLPPYGWVNKDGKRVGYDLYLARRIAK---DLGVKAKFVQ 94 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 +NA R L S + D++ N T R+ ++ A +P G + K I+ VSQ Sbjct: 95 VNANNRVDTLNSNKADLVLANFTVTSERKQTVDFA-KPYMKV-SVGVVSKKSDPITKVSQ 152 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G + V GTT E YF H + F+ + A + R A D S LY Sbjct: 153 LKGQKLIVNKGTTAE----QYFTQHQTGASLLKFDSKTQQFNALKNGRAKALADDNSYLY 208 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 A + P V + + S +APA+ +G+ ++++WT+ + +K+ N Sbjct: 209 A--WVKNNPKYTVGIKQLGKSSYIAPAVKKGNK---SLLNWTNKEITKLNGENFFEKDYN 263 Query: 263 Q 263 Q Sbjct: 264 Q 264 >gi|111020580|ref|YP_703552.1| glutamate binding protein solute binding protein family [Rhodococcus jostii RHA1] gi|110820110|gb|ABG95394.1| probable glutamate binding protein, bacterial solute binding protein family protein [Rhodococcus jostii RHA1] Length = 336 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 58/202 (28%), Positives = 98/202 (48%), Gaps = 11/202 (5%) Query: 24 ASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 S L +I RG L GI NT L F + G GFDVD ++ +F DPS++++ Sbjct: 90 GSSLAEITARGRLIVGIDQNTNLFSFRD-PTTGMLMGFDVDVAGEMARDLFGDPSRVEFR 148 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 L + +RF ALQ++ +D++ ++T T R S +AF + + Q ++ K GIS + Sbjct: 149 LLTSGDRFDALQNEDVDLVVKSTSITCER--SERVAFSTVYFQAYQRLLVPKGSGISGPA 206 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L+G +C AG TT L D + + + ++ + + DA + D S L Sbjct: 207 DLAGKRVCT-AGDTTSL---DTVRRVQPEATIVAVPDWDDCLVVLQQRQADAASTDDSIL 262 Query: 202 YALKLTNDRPSEHVILPDIISK 223 L + P+ ++ P + S+ Sbjct: 263 AGLAAQD--PNLEIVGPPLESE 282 >gi|307706136|ref|ZP_07642955.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus mitis SK321] gi|307618536|gb|EFN97684.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus mitis SK321] Length = 264 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 55/205 (26%), Positives = 98/205 (47%), Gaps = 10/205 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFA-EVKANGDW 56 M K FF+S + LI LF + + + + DI+KRG L G+ + F + G + Sbjct: 1 MKKKFFLSAI-LISLFGLAAAKPVQADTSVADIQKRGELVVGVKQDVPNFGYKNPKTGTY 59 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G + D + ++ + KI+Y+P+ A+ R L ++Q+D+ +T+ E Sbjct: 60 SGIETDLAKMVADEL---KVKIRYVPVTAQTRGPLLDNEQVDM--DIATFTITDERKKLY 114 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F Y D GF+++K I S+ L+G +I V G+ T+ + + K + + + Sbjct: 115 NFTSPYYTDASGFLVNKSAKIKSIEDLNGKTIGVAQGSITQRLITELGKKKGLTFKFVEL 174 Query: 177 ERVEEIDAAYRAHRCDAYTGDISAL 201 E+ + AHR DA++ D S L Sbjct: 175 GSYPELITSLHAHRIDAFSVDRSIL 199 >gi|313667604|ref|YP_004047888.1| ABC transporter [Neisseria lactamica ST-640] gi|313005066|emb|CBN86498.1| putative ABC transporter [Neisseria lactamica 020-06] Length = 284 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 64/235 (27%), Positives = 111/235 (47%), Gaps = 16/235 (6%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 +S S+ A+ + IK++G ++ G+ F V ANG +GFDV+ + L+ + P K Sbjct: 32 SSQSSGAATVAAIKEKGVIRIGVFGDKPPFGYVDANGKNQGFDVEIAKDLAKDLLGSPDK 91 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++++ A R ++S ++D++ N +T E + + F G + K K I Sbjct: 92 VEFVLTEAANRVEYVRSGKVDLILAN--FTKTPERAEAVDFADPYMKVALGVVSPKDKPI 149 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV----FERVEEIDAAYRAHRCDA 193 + V+QL ++ V GTT AD F K HP V F++ E A + R A Sbjct: 150 TDVAQLKDQTLLVNKGTT-----ADAF---FTKSHPEVKLLKFDQNTETFDALKDGRGVA 201 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 D + L+A N P+ V + ++ +APA+ +G+ + N V+ AM Sbjct: 202 LAHDNALLWAWAKEN--PNFEVAIGNLGPAEFIAPAVQKGNADLLNWVNGEIAAM 254 >gi|242278992|ref|YP_002991121.1| extracellular solute-binding protein family 3 [Desulfovibrio salexigens DSM 2638] gi|242121886|gb|ACS79582.1| extracellular solute-binding protein family 3 [Desulfovibrio salexigens DSM 2638] Length = 271 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 56/240 (23%), Positives = 108/240 (45%), Gaps = 17/240 (7%) Query: 10 LCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDF 63 L +I+ + + AS+ L ++K RG L CG+ +V F + + G D+D Sbjct: 4 LSIIVAMVLAMALCASVAMADKLQEVKARGVLMCGVKDAVVPFGYIDEDTKKLVGLDIDI 63 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 C ++ + K ++ P+ + R + ID+ + + R+ ++ + ITY Sbjct: 64 CNYIAKELG---VKAEFKPVTSATRIPMVVQGSIDLAAATMTHKIARDDTIDFS---ITY 117 Query: 124 F-DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 F DGQ ++ K GI+SV+ L G + G+T+E + A + FE + Sbjct: 118 FMDGQKLLVKKGAGINSVADLKGKKVGTAKGSTSEQNIM----AAQPDCKVLSFEGYPQA 173 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A + + A T D + L LK ++ P + I+ + IS P + + ++ + + V+ Sbjct: 174 MLALKQGKVKAVTTDSTILLGLKNSDPNPEKWEIVGEFISPEPYGIGLPENESNFRDAVN 233 >gi|283954532|ref|ZP_06372051.1| CjaA protein [Campylobacter jejuni subsp. jejuni 414] gi|283793936|gb|EFC32686.1| CjaA protein [Campylobacter jejuni subsp. jejuni 414] Length = 279 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 56/227 (24%), Positives = 104/227 (45%), Gaps = 12/227 (5%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 S S + L +IK+ G ++ G+ F V G+ +G+DV + ++ +F D +K Sbjct: 23 NSDSKTLNSLDEIKQNGVVRIGVFGDKPPFGYVDEKGNNQGYDVVLAKRIAKELFGDENK 82 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKK 135 +Q++ + A R L+S ++DI+ N T R ++ L + + G + K Sbjct: 83 VQFVLVEAANRVEFLKSNKVDIILANFTQTPQRAEQVDFCLPYMKVAL----GVAVPKDS 138 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I+SV L + + GTT + YF + + +++ E AA R DA + Sbjct: 139 NITSVEDLKDKILLLNKGTTADA----YFTQNYPNIKTLKYDQNTETFAALMDKRGDALS 194 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 D + L+A D P + + ++ +K +APA+ +GD E + Sbjct: 195 HDNTLLFA--WIKDHPDFKMGIKELGNKDVIAPAVKKGDKELKEFID 239 >gi|324993850|gb|EGC25769.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK405] gi|324994829|gb|EGC26742.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK678] gi|325687270|gb|EGD29292.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK72] Length = 270 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 83/173 (47%), Gaps = 6/173 (3%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 I+KRG L G+ + F + + + + G ++D + ++ + KI Y+P+ A+ R Sbjct: 38 IQKRGVLNVGVKQDVPNFGYLNPDSNTYSGLEIDIAKKIAKEL---GVKINYVPVTAQTR 94 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 L + Q+D++ +T+ E F P Y D GF+++K I+ V L+ +I Sbjct: 95 GPLLDNGQVDMVIAT--FTITDERKEIYNFTPPYYTDASGFLVNKSSKITDVKDLNNKTI 152 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 V G+ T+ L + + + + + E+ + RAHR DA + D S L Sbjct: 153 GVVQGSITQTLLEEIAQEKKLNFKYVELGSYPELAVSLRAHRIDAISVDKSIL 205 >gi|315644844|ref|ZP_07897973.1| extracellular solute-binding protein family 3 [Paenibacillus vortex V453] gi|315279786|gb|EFU43087.1| extracellular solute-binding protein family 3 [Paenibacillus vortex V453] Length = 269 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 66/246 (26%), Positives = 113/246 (45%), Gaps = 24/246 (9%) Query: 7 VSILCLIILFFTSF---STNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDV 61 +IL LI++ S S N L IKKRG L G+ +T L G + A G+ +GFD+ Sbjct: 13 AAILSLIMMLIASGCGGSGNTDTLDAIKKRGKLVAGVKYDTKLFGLQD-PATGNVEGFDI 71 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D +AL+ I D +K++ + +K R L++ IDI+ T+ E + F + Sbjct: 72 DIAKALAKKILGDETKVELKEVTSKTRIDMLKNGDIDIIIAT--MTITEERKEQVDFSDV 129 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP-----IVF 176 + GQ ++ K I+ + L+ T LT+ A N++ + F Sbjct: 130 YFEAGQSLLVKKGSPITGLESLN--------KDTKVLTVKGSTSAQNIREKAPDAVILEF 181 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E ++ A +A + DA T D S L ++ + PS ++ + + P AI +G+ E Sbjct: 182 ENYQDAFTALKAGQGDALTTDNSILLGMQQQD--PSFELVGGN-FTDEPYGMAIKKGNPE 238 Query: 237 WYNIVS 242 + V+ Sbjct: 239 FVKTVN 244 >gi|121612178|ref|YP_001000662.1| CjaA protein [Campylobacter jejuni subsp. jejuni 81-176] gi|167005588|ref|ZP_02271346.1| CjaA protein [Campylobacter jejuni subsp. jejuni 81-176] gi|71532927|emb|CAJ20048.1| glutamine-binding protein [Campylobacter jejuni subsp. jejuni 81-176] gi|87249126|gb|EAQ72087.1| CjaA protein [Campylobacter jejuni subsp. jejuni 81-176] Length = 279 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 57/228 (25%), Positives = 104/228 (45%), Gaps = 14/228 (6%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 S S + L IK+ G ++ G+ F V G+ +G+D+ + ++ +F D +K Sbjct: 23 NSDSKTLNSLDKIKQNGVVRIGVFGDKPPFGYVDEKGNNQGYDIALAKRIAKELFGDENK 82 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKK 135 +Q++ + A R L+S ++DI+ N T R ++ L + + G + K Sbjct: 83 VQFVLVEAANRVEFLKSNKVDIILANFTQTPERAEQVDFCLPYMKVAL----GVAVPKDS 138 Query: 136 GISSVSQLSGASICVQAGTTTELTLA-DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I+SV L ++ + GTT + DY +KY ++ E AA R DA Sbjct: 139 NITSVEDLKDKTLLLNKGTTADAYFTQDYPNIKTLKY-----DQNTETFAALMDKRGDAL 193 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + D + L+A D P + + ++ +K +APA+ +GD E + Sbjct: 194 SHDNTLLFA--WVKDHPDFKMGIKELGNKDVIAPAVKKGDKELKEFID 239 >gi|294670245|ref|ZP_06735138.1| CjaA protein [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291307982|gb|EFE49225.1| CjaA protein [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 288 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 62/217 (28%), Positives = 100/217 (46%), Gaps = 19/217 (8%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 IK++G ++ G+ F V ANG +GFDV+ + ++ + P KI+++ A R Sbjct: 48 IKEKGVIRIGVFGDKPPFGYVDANGKNQGFDVEIAKEMAKDLLGSPDKIEFVLTEAANRV 107 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 ++S ++D+L N +T E + + F G + K K I+ V+QL ++ Sbjct: 108 EYVRSGKVDVLLAN--FTQTPERAEAVDFASPYMKVALGVVSPKGKPITDVAQLKDQTLL 165 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIV----FERVEEIDAAYRAHRCDAYTGDISALYALK 205 V GTT AD F N HP V F++ E A + R A D + L+A Sbjct: 166 VNKGTT-----ADAFFTKN---HPEVKLLKFDQNTETFDALKDGRGVALAHDNALLWAWA 217 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDT---EWYN 239 N P V + +I +APA+ +GD +W N Sbjct: 218 KEN--PDYEVAIGNIGPAESIAPAVKKGDKALLDWVN 252 >gi|241759167|ref|ZP_04757275.1| antigenic protein [Neisseria flavescens SK114] gi|241320586|gb|EER56863.1| antigenic protein [Neisseria flavescens SK114] Length = 284 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 62/235 (26%), Positives = 109/235 (46%), Gaps = 16/235 (6%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 +S S+ A+ + IK++G ++ G+ F V ANG +GFDV+ + L+ + P K Sbjct: 32 SSQSSGAATVASIKEKGVIRIGVFGDKPPFGYVDANGKNQGFDVEIAKDLAKDLLGSPDK 91 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++++ A R ++S ++D++ N +T E + + F G + K K I Sbjct: 92 VEFVLTEAANRVEYVRSGKVDLILAN--FTKTPERAEAVDFADPYMKVALGVVSPKGKPI 149 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV----FERVEEIDAAYRAHRCDA 193 + V+QL ++ V GTT + A K HP V F++ E A + R A Sbjct: 150 TDVAQLKDQTLLVNKGTTAD--------AFFTKSHPEVKLLKFDQNTETFDALKDGRGAA 201 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 D + L+A N P V + ++ +APA+ +G+ + N V+ AM Sbjct: 202 LAHDNALLWAWAKEN--PDFEVAIGNLGPAEFIAPAVQKGNADLLNWVNSEIAAM 254 >gi|224437618|ref|ZP_03658571.1| bifunctional adhesin/ABC transporter aspartate/glutamate-binding protein [Helicobacter cinaedi CCUG 18818] gi|313144069|ref|ZP_07806262.1| amino acid ABC transporter [Helicobacter cinaedi CCUG 18818] gi|313129100|gb|EFR46717.1| amino acid ABC transporter [Helicobacter cinaedi CCUG 18818] Length = 258 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 65/212 (30%), Positives = 102/212 (48%), Gaps = 12/212 (5%) Query: 11 CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSS 69 ++L + NA +L DIKKRG + G+ + FA + + + +GF+VD + L+ Sbjct: 14 LFLVLGIFALQANAGMLEDIKKRGEIVVGVKNDVPCFALLDQKTKEIQGFEVDVAKLLAK 73 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 +I D KI+ + +NAK R L + ID + +T+ E F Y D G Sbjct: 74 SILGDEKKIKLVAVNAKTRGPLLDNGSIDAVIAT--FTITPERKRTYNFSQAYYKDAVGL 131 Query: 130 IMHKKKGISSVSQLSGASICV-QAGTTTELTLADYFK-AHNMKYHPIVFERVEEIDAAYR 187 ++ K+KG S++ + +I V QA T+ + A K N+K++ F I AA Sbjct: 132 LVLKEKGYKSIADMKNTTIGVAQAATSKKAIDAAAKKLGVNVKFNE--FPDYPSIKAALD 189 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPD 219 A R DA+ D S L L +D+ ILPD Sbjct: 190 AKRVDAFGVDKSIL--LGYVDDKSE---ILPD 216 >gi|317177920|dbj|BAJ55709.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter pylori F16] Length = 277 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 63/237 (26%), Positives = 107/237 (45%), Gaps = 16/237 (6%) Query: 10 LCLIILFFTSFSTNASILGD----IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 L LI L F++ S + D IK+RG LK G+ + F V + G ++G+DV + Sbjct: 14 LVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGYDVVIAK 73 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ + D +KI+++P+ A R L++ ++DI+ N T RE + A +P Y Sbjct: 74 RMAFDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKVVDFA-KP--YMK 130 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 ++ K I ++ +L + V GTT + YF + + FE+ E A Sbjct: 131 VALGVVSKDGVIKNIEELKDKELIVNKGTTADF----YFTKNYPNIKLLKFEQNTETFLA 186 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT---EWYN 239 + A D + L A P + + + K +APAI +G+ EW N Sbjct: 187 LLNDKAIALAHDNTLLLA--WIKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLEWLN 241 >gi|306829074|ref|ZP_07462264.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus mitis ATCC 6249] gi|304428160|gb|EFM31250.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus mitis ATCC 6249] Length = 264 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 55/205 (26%), Positives = 97/205 (47%), Gaps = 10/205 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFA-EVKANGDW 56 M K FF+S L LI LF + + + + DI+KRG L G+ + F + G + Sbjct: 1 MKKKFFLSAL-LISLFSLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTY 59 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G + D + ++ + K++Y+P+ A+ R L ++Q+D+ +T+ E Sbjct: 60 SGIETDLSKMIADEL---KVKVRYVPVTAQTRGPLLDNEQVDM--DIATFTITDERKKLY 114 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F Y D GF+++K I S L+G +I V G+ T+ + + K + + + Sbjct: 115 NFTSPYYTDASGFLVNKSANIKSFEDLNGKTIGVAQGSITQRLITELGKKKGLTFKFVEL 174 Query: 177 ERVEEIDAAYRAHRCDAYTGDISAL 201 E+ + AHR DA++ D S L Sbjct: 175 GSYPELITSLHAHRIDAFSVDRSIL 199 >gi|116326670|ref|YP_796444.1| amino acid ABC transporter periplasmic protein [Lactobacillus casei ATCC 334] gi|116106488|gb|ABJ71629.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus casei ATCC 334] Length = 284 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 62/216 (28%), Positives = 99/216 (45%), Gaps = 14/216 (6%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 IKK G ++ + L + V +G G+DV ++ D K++++ +NA R Sbjct: 45 IKKNGTIRIAVFGDLPPYGWVNKDGKRVGYDVTLAHQVAK---DLGVKVKFVQVNANNRV 101 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 AL S ++D++ N T R+ + A +P G + K K I+ SQL G ++ Sbjct: 102 DALNSNKVDLVLANFTVTPERKQVIDFA-KPYMKV-SVGVVSPKNKAITKASQLKGKNVI 159 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V GTT E +YF + + F+ + A + R A D S LYA + D Sbjct: 160 VTKGTTAE----NYFTSKQPDVKLLKFDSKTQQFNALKNGRGVALADDNSYLYA--WSKD 213 Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 PS V + I KS +APA+ +G+ N WT+ Sbjct: 214 NPSYTVGIKSIGPKSYIAPAVKKGNKSLLN---WTN 246 >gi|237751561|ref|ZP_04582041.1| glutamine ABC transporter [Helicobacter bilis ATCC 43879] gi|229372927|gb|EEO23318.1| glutamine ABC transporter [Helicobacter bilis ATCC 43879] Length = 284 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 65/238 (27%), Positives = 116/238 (48%), Gaps = 14/238 (5%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S + IK G ++ G+ + F + N ++KGFDV + + + D +KI+++P+ Sbjct: 41 SAIETIKNNGKIRIGVFSDKPPFGYYE-NNEYKGFDVYIAKRFAKDLLGDENKIEFVPVE 99 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 A R AL++ ++DI+ N T RE + A +P Y ++ K I+S QL Sbjct: 100 AAARASALKANKVDIIMANFTKTPEREKQVDFA-KP--YMKVTLGVVSKDGAITSEEQLQ 156 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G ++ V GTT AD + + + + FE+ E A++ + DA + D + LYA Sbjct: 157 GKTLIVNKGTT-----ADIYFSKQSGINLLKFEQNTETFQAFQQGKGDALSHDSTMLYAW 211 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 N P V + I + +APA+ QG+ E ++ W + + T ++ G ++ N Sbjct: 212 VKHN--PDYKVGIQSIGEQDVIAPAVKQGNKE---LLDWLNTEIDTLQKEGFFKEAYN 264 >gi|153951094|ref|YP_001397935.1| CjaA protein [Campylobacter jejuni subsp. doylei 269.97] gi|152938540|gb|ABS43281.1| CjaA protein [Campylobacter jejuni subsp. doylei 269.97] Length = 279 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 55/227 (24%), Positives = 104/227 (45%), Gaps = 12/227 (5%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 S S + L IK+ G ++ G+ F V G+ +G+D+ + ++ +F D +K Sbjct: 23 NSDSKTLNSLDKIKQNGVVRIGVFGDKPPFGYVDEKGNNQGYDIVLAKRIAKELFGDENK 82 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKK 135 +Q++ + A R L+S ++DI+ N T R ++ L + + G + K Sbjct: 83 VQFVLVEAANRVEFLKSNKVDIILANFTETPQRAEQVDFCLPYMKVAL----GVAVPKDS 138 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I+SV L ++ + GTT + YF + + +++ E AA R DA + Sbjct: 139 NITSVEDLKDKTLLLNKGTTADA----YFTQNYPDIKTLKYDQNTETFAALMDKRGDALS 194 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 D + L+A D P + + ++ +K +APA+ +GD E + Sbjct: 195 HDNTLLFA--WVKDHPDFKMGIKELGNKDVIAPAVKKGDKELKEFID 239 >gi|182683540|ref|YP_001835287.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae CGSP14] gi|182628874|gb|ACB89822.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae CGSP14] Length = 293 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 55/205 (26%), Positives = 97/205 (47%), Gaps = 10/205 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFA-EVKANGDW 56 M K FF+S L LI LF + + + + DI+KRG L G+ + F + G + Sbjct: 30 MKKKFFLSAL-LISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTY 88 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G + D + ++ + KI+Y+P+ A+ R L ++Q+D+ +T+ E Sbjct: 89 SGIETDLAKIVADEL---KVKIRYVPVTAQTRGPLLDNEQVDM--DIATFTITDERKKLY 143 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F Y D GF+++K I + L+G +I V G+ T+ + + K + + + Sbjct: 144 NFTSPYYTDASGFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLTFKFVEL 203 Query: 177 ERVEEIDAAYRAHRCDAYTGDISAL 201 E+ + AHR DA++ D S L Sbjct: 204 GSYPELITSLHAHRIDAFSVDRSIL 228 >gi|251781981|ref|YP_002996283.1| amino acid ABC transporter amino acid-binding protein [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390610|dbj|BAH81069.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 268 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 51/208 (24%), Positives = 102/208 (49%), Gaps = 12/208 (5%) Query: 1 MYKDFFVSILC-LIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKA-N 53 + K + + ++C L+ L S S T ++L I K+G L+ G+ + F + Sbjct: 2 LMKKYSLLVICFLLTLICPSLSQASELTTPNVLKQITKKGQLRIGVKQDVPNFGYYHPKH 61 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 ++G ++D + ++ A+ P Q+ + A+ R L ++Q+D++ +T+ E Sbjct: 62 RQFEGMEIDIAKKIAKALNVKP---QFTAVTAQTREALLDNQQLDMII--ATYTITPERQ 116 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 AF Y D GF++ K I+S+ +L +I V G+TT+ + +Y KAH++ + Sbjct: 117 KQYAFSNPYYLDEIGFLVKKSDAITSIKELDQKTIGVAQGSTTKNAIEEYGKAHDLSFSF 176 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISAL 201 + E+ + A+R +++ D S L Sbjct: 177 VQLGSYPELAISLYANRIASFSVDKSIL 204 >gi|4204972|gb|AAD10862.1| orf J; putative ATP-binding cassette transport system; similar to substrate binding protein and to components of ABC transport systems [Leuconostoc lactis] Length = 279 Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 18/218 (8%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 IKK G +K + L + V NG +G+D++ + ++ D K++Y+ +NA R Sbjct: 41 IKKSGKIKIAVFGDLKPYGWVDKNGKRQGYDIELAKKIAK---DLGVKVKYVQVNANARV 97 Query: 90 LALQSKQIDILSRNTDWTLLRE--ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 AL S ++D+ N T R+ IS + ++ G K I+ V+QL G + Sbjct: 98 DALNSGKVDLALANFTVTPERKEVISFAKPYMKVSI----GVASKKTNLITKVNQLKGKN 153 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 + V GTT E YF + F+ + AA + R DA T D S L+A Sbjct: 154 LIVNKGTTAET----YFTKEYTSAKLLKFDSKTQQFAALKDGRADAITDDNSYLFA--WV 207 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 D P V + + +S ++P + +G+ +++ WT+ Sbjct: 208 KDHPDYKVGIKQLGEQSYISPGVQKGNK---SVLKWTN 242 >gi|224008546|ref|XP_002293232.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220971358|gb|EED89693.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 277 Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 78/315 (24%), Positives = 126/315 (40%), Gaps = 65/315 (20%) Query: 27 LGDIKKRGFLKCGINT----GLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 L +++R L+CGI+ G + F +GF+VD C+A+++A + +P Sbjct: 1 LEALQERKVLRCGIHKYDSRGFISFN--NETNTREGFEVDLCKAVAAASLGSNFSYELVP 58 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREI---SLGLAFR---PITY----FDGQGFIMH 132 RF L S + D+L +T T R++ S G+ F P Y ++G + Sbjct: 59 TTGLTRFADLASGEFDVLVASTTHTFDRDVHESSTGMGFSFSTPYLYGGMTYNGVPEFVK 118 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYHPIVFERV---------- 179 +S+V +G IC GTT T + F A N+ K F+ + Sbjct: 119 CADELSAVGDCAGILICSILGTTWYETTKELFPASNIVLTKEQGESFQNLINGKCNVIQG 178 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E+ +A R Y G Y T+ +K PLA GD E+ Sbjct: 179 EQYEAPEVVVRGFGYEGP----YGQGKTS------------FTKDPLAMVTRDGDPEFAA 222 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 +V W ++ AE ++NI ++ DT V+ F KD Sbjct: 223 LVEWVLQTLILAE-----KQNITMMAADTFAESVEFF---------------GKDMFQNA 262 Query: 300 IRHMGNYGEMFDRNL 314 + +GNYGE++ R+L Sbjct: 263 LAAVGNYGEIYTRHL 277 >gi|303246863|ref|ZP_07333140.1| extracellular solute-binding protein family 3 [Desulfovibrio fructosovorans JJ] gi|302491880|gb|EFL51760.1| extracellular solute-binding protein family 3 [Desulfovibrio fructosovorans JJ] Length = 272 Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 64/236 (27%), Positives = 107/236 (45%), Gaps = 17/236 (7%) Query: 27 LGDIKKRGFLKCGINTGL--VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 L DIK RG L G+ G+ + K N GF++D +AL+ + K++ P+ Sbjct: 27 LDDIKARGALVAGVKDSQPPFGYVDEKTN-QIVGFEIDLMQALAKRL---GVKLELKPVT 82 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF-DGQGFIMHKKKGISSVSQL 143 + R L +DI++ RE + + ITYF GQ ++ K G+ SV+ L Sbjct: 83 SSTRIPMLGQGAVDIVAATMTHKKEREDQIDFS---ITYFMTGQKLLVKKGGGVQSVADL 139 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 +G + G+T+E + K I FE E A + + A T D S L Sbjct: 140 NGKKVASVKGSTSEQNV----KKAQPGCTVISFETYPEAFLALKQGKVQAMTTDESILVG 195 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 ++ ++D P + I+ D IS P + + D+++ + V + A++ E G QK Sbjct: 196 IRNSDDHPEKWEIVGDYISPEPYGFGLPENDSDFRDYV---NLALMNMWETGEYQK 248 >gi|226362770|ref|YP_002780548.1| ABC transporter substrate-binding protein [Rhodococcus opacus B4] gi|226241255|dbj|BAH51603.1| putative ABC transporter substrate-binding protein [Rhodococcus opacus B4] Length = 325 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 46/139 (33%), Positives = 71/139 (51%), Gaps = 7/139 (5%) Query: 25 SILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 S L I+ RG L G NT L F + K G GFD+D R ++ +F DPSK+++ Sbjct: 80 SALAAIRARGRLIVGTDQNTNLFSFRDPK-TGTLSGFDIDLAREIARDLFGDPSKVEFRL 138 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG-QGFIMHKKKGISSVS 141 L + RF AL+ +D++ T T R +G + YF+ Q ++ + GISS + Sbjct: 139 LTSAGRFDALERNDVDLVVHATSITCERAARVGFSS---VYFEAFQRLLVPEGSGISSPT 195 Query: 142 QLSGASICVQAGTTTELTL 160 L+G +C TT+ T+ Sbjct: 196 DLAGKRVCTFIDTTSLATI 214 >gi|32266237|ref|NP_860269.1| amino-acid ABC transporter periplasmic solute-binding protein [Helicobacter hepaticus ATCC 51449] gi|32262287|gb|AAP77335.1| amino-acid ABC transporter periplasmic solute-binding protein [Helicobacter hepaticus ATCC 51449] Length = 275 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 62/233 (26%), Positives = 106/233 (45%), Gaps = 16/233 (6%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 T S NA L +IK++G ++ G+ + F + G GFDV + ++ + D +K Sbjct: 26 TKESKNA--LEEIKQKGVVRIGVFSDKPPFGFINEKGQNDGFDVYIAKRIAKDLLGDENK 83 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++++ A R L+S ++DI+ N T RE + A +P Y ++ I Sbjct: 84 VEFVLTEAASRVEFLRSNKVDIIMANFTQTPEREAVVDFA-KP--YMKVALGVISPNGEI 140 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 S+ L G + V GTT + +F + + +E+ E A + R DA D Sbjct: 141 KSIDDLKGKKLIVNKGTTADA----FFSKNYPDIELLKYEQNTEAFLALKDKRGDALAHD 196 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN-----IVSWTH 245 + L A + N+ +V +P + + +APAI +G+ E N I S TH Sbjct: 197 NTLLLAWAMENE--GFNVGIPTLGEEENIAPAIKKGNIELKNWLDNEITSLTH 247 >gi|302024082|ref|ZP_07249293.1| glutamine-binding protein precursor [Streptococcus suis 05HAS68] Length = 270 Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 47/181 (25%), Positives = 87/181 (48%), Gaps = 6/181 (3%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQY 80 TN+ + I RG L+ G+ + F + G+++G ++D R ++ + D I++ Sbjct: 30 TNSDQVQAIIDRGVLRVGVKQDVPNFGYKNPDTGEFEGMEIDIARKIADELGVD---IEF 86 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 P+ A+ R L + Q+D++ +T+ E L F Y D GF+++K GI + Sbjct: 87 TPVTAQTRGPLLDNGQVDMVIAT--FTITEERKLLYNFTTPYYTDAVGFLVNKDSGIKTF 144 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + L G +I V G+ T ++ + + + E+ + RAHR DA++ D S Sbjct: 145 TDLDGKTIGVAQGSITRTLISKLADKYGISVNFAELGSYPELSVSLRAHRTDAFSVDQSI 204 Query: 201 L 201 L Sbjct: 205 L 205 >gi|302386907|ref|YP_003822729.1| extracellular solute-binding protein family 3 [Clostridium saccharolyticum WM1] gi|302197535|gb|ADL05106.1| extracellular solute-binding protein family 3 [Clostridium saccharolyticum WM1] Length = 289 Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 59/224 (26%), Positives = 104/224 (46%), Gaps = 15/224 (6%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 S A L +IK+ G +K G+ + F V +NG +G+DV F + L+ + K ++ Sbjct: 36 SAKARTLSEIKEDGTIKIGVFSDKNPFGYVDSNGKIQGYDVYFAKRLAKDLLGSEDKAEF 95 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKKGIS 138 + + A R L+S ++D++ N T R ++ L + + G + IS Sbjct: 96 VYVEAASRVEYLKSAKVDVILANFTVTDERKEQVDFALPYMKVAL----GVVSPDAALIS 151 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 V+QL ++ V GTT E YF ++ + + F+ +E A R DA++ D Sbjct: 152 DVTQLKDKTLIVVKGTTAET----YFSENHQEVKLLKFDEYQEAYDALLDGRGDAFSTDN 207 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE---WYN 239 + + A L N + V + I + +APA+ +G+ E W N Sbjct: 208 TEVLAWALQNKGFT--VGIESIGNLDTIAPAVQKGNKELLDWIN 249 >gi|226361323|ref|YP_002779101.1| ABC transporter substrate-binding protein [Rhodococcus opacus B4] gi|226239808|dbj|BAH50156.1| putative ABC transporter substrate-binding protein [Rhodococcus opacus B4] Length = 324 Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 46/143 (32%), Positives = 71/143 (49%), Gaps = 7/143 (4%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTG--LVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 F T + I+ RG L G++TG L+ F + A G +GFDVD R +S +F D Sbjct: 71 FPDTGTPMPTVDAIRARGRLVVGLDTGSNLMSFRD-PATGAIEGFDVDVAREISRDLFGD 129 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM-HK 133 P ++ Y L + R ALQ +DI+++ T R+ + + YF+ Q ++ K Sbjct: 130 PDRLDYRILTSANREKALQESMVDIVAKTMTITCDRKERVAFSSE---YFEAQQRVLVVK 186 Query: 134 KKGISSVSQLSGASICVQAGTTT 156 I S + L G +CV GTT+ Sbjct: 187 GSPIRSAADLDGKRVCVVRGTTS 209 >gi|292558665|gb|ADE31666.1| Major cell-binding factor precursor (CBF1) [Streptococcus suis GZ1] Length = 279 Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 46/181 (25%), Positives = 87/181 (48%), Gaps = 6/181 (3%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQY 80 TN+ + I RG L+ G+ + F + G+++G ++D R ++ + D I++ Sbjct: 39 TNSDQVQAIIDRGVLRVGVKQDVPNFGYKNPDTGEFEGMEIDIARKIADELGVD---IEF 95 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 P+ A+ R L + Q+D++ +T+ E L F Y D GF+++K GI + Sbjct: 96 TPVTAQTRGPLLDNSQVDMVIAT--FTITEERKLLYNFTTPYYTDAVGFLVNKDSGIKTF 153 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + L G +I V G+ T +++ + + + E+ + RAHR D ++ D S Sbjct: 154 TDLDGKTIGVAQGSITRTLISELADKYGITVNFAELGSYPELSVSLRAHRTDTFSVDQSI 213 Query: 201 L 201 L Sbjct: 214 L 214 >gi|145589173|ref|YP_001155770.1| extracellular solute-binding protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047579|gb|ABP34206.1| amino acid ABC transporter substrate-binding protein, PAAT family [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 304 Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 53/242 (21%), Positives = 104/242 (42%), Gaps = 8/242 (3%) Query: 2 YKDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 YK+ + + + NA+ L IK G + G+ + + + + G+ Sbjct: 3 YKNLISASVFAASFLVGAIDANAASQTLDKIKSSGAVTMGVRESSIPMSYTTGDSRFDGY 62 Query: 60 DVDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 V+ CR + I D +I Y P+ ++ R +Q+ +DI T + R +G Sbjct: 63 HVEICRMILGDIKDKLGMSTLRINYQPVTSQNRVPLVQNGTVDIECGTTTNNVNRAKDVG 122 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 A+ Y + + GI+S+SQL+G + GTT+ L + KA+ + + + Sbjct: 123 FAY--TLYVEEVRIAVKANSGITSISQLAGKKVATTTGTTSVQLLRKHEKANGVNFEEVY 180 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + + R DA+ D S L + P ++ I+ +++S P+A + + D Sbjct: 181 GKDHADSFLLLESGRADAFVMDGSILAGNIANSKNPKDYKIVGEVLSTEPIAIMVRKDDP 240 Query: 236 EW 237 E+ Sbjct: 241 EF 242 >gi|254707032|ref|ZP_05168860.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella pinnipedialis M163/99/10] Length = 62 Score = 69.7 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 28/53 (52%), Positives = 38/53 (71%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 LF + +A L D+K +GFL+CG+NTGL+GFA G+W GFDVD+CRA+ Sbjct: 10 LFGIASGASADTLSDVKAKGFLQCGVNTGLLGFASPNDKGEWSGFDVDYCRAV 62 >gi|261400798|ref|ZP_05986923.1| CjaA protein [Neisseria lactamica ATCC 23970] gi|269209400|gb|EEZ75855.1| CjaA protein [Neisseria lactamica ATCC 23970] Length = 284 Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 61/235 (25%), Positives = 109/235 (46%), Gaps = 16/235 (6%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 +S S+ A+ + IK++G ++ G+ F V ANG +GFDV+ + L+ + P K Sbjct: 32 SSQSSGAATVAAIKEKGVIRIGVFGDKPPFGYVDANGKNQGFDVEIAKDLAKDLLGSPDK 91 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++++ A R ++S ++D++ N +T E + + F G + K K I Sbjct: 92 VEFVLTEAANRVEYVRSGKVDLILAN--FTKTPERAEAVDFADPYMKVALGVVSPKGKPI 149 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV----FERVEEIDAAYRAHRCDA 193 + ++QL ++ V GTT + A K HP V F++ E A + R A Sbjct: 150 TDIAQLKDQTLLVNKGTTAD--------AFFTKSHPEVKLLKFDQNTETFDALKDGRGAA 201 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 D + L+A N P V + ++ +APA+ +G+ + N V+ AM Sbjct: 202 LAHDNALLWAWAKEN--PDFEVAIGNLGPAEFIAPAVQKGNADLLNWVNGEIAAM 254 >gi|1930092|gb|AAB51532.1| outer membrane protein [Campylobacter jejuni] Length = 279 Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 57/228 (25%), Positives = 104/228 (45%), Gaps = 14/228 (6%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 S S + L IK+ G ++ G+ F V G+ +G+D+ + ++ +F D +K Sbjct: 23 NSDSKTLNSLDKIKQNGVVRIGVFGDKPPFGYVDEKGNNQGYDIALAKRIAKELFGDENK 82 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKK 135 +Q++ + A R L+S ++DI+ N T R ++ L + + G + K Sbjct: 83 VQFVLVEAANRVEFLKSNKVDIILANFTQTPERAEQVDFCLPYMKVAL----GVAVPKDS 138 Query: 136 GISSVSQLSGASICVQAGTTTELTLA-DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I+SV L ++ + GTT + DY +KY ++ E AA R DA Sbjct: 139 NITSVEDLIDKTLLLNKGTTADAYFTQDYPNIKTLKY-----DQNTETFAALMDKRGDAL 193 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + D + L+A D P + + ++ +K +APA+ +GD E + Sbjct: 194 SHDNTLLFA--WVKDHPDFKMGIKELGNKDVIAPAVKKGDKELKEFID 239 >gi|296313420|ref|ZP_06863361.1| CjaA protein [Neisseria polysaccharea ATCC 43768] gi|296840052|gb|EFH23990.1| CjaA protein [Neisseria polysaccharea ATCC 43768] Length = 287 Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 62/232 (26%), Positives = 108/232 (46%), Gaps = 16/232 (6%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 S+ A+ + IK++G ++ G+ F V ANG +GFDV+ + L+ + P K+++ Sbjct: 38 SSGAATVAAIKEKGVIRIGVFGDKPPFGYVDANGKNQGFDVEIAKDLAKDLLGSPDKVEF 97 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + A R ++S ++D++ N +T E + + F G + K K I+ + Sbjct: 98 VLTEAANRVEYVRSGKVDLILAN--FTKTPERAEAVDFADPYMKVALGVVSPKGKPITDI 155 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV----FERVEEIDAAYRAHRCDAYTG 196 +QL ++ V GTT AD F N HP V F++ E A + R A Sbjct: 156 AQLKDQTLLVNKGTT-----ADAFFTKN---HPEVKLLKFDQNTETFDALKDGRGAALAH 207 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 D + L+A N P V + ++ +APA+ +G+ + N V+ AM Sbjct: 208 DNALLWAWAKEN--PDFEVAIGNLGPAEFIAPAVQKGNADLLNWVNGEIAAM 257 >gi|223932683|ref|ZP_03624682.1| extracellular solute-binding protein family 3 [Streptococcus suis 89/1591] gi|330832443|ref|YP_004401268.1| extracellular solute-binding protein family 3 [Streptococcus suis ST3] gi|223898653|gb|EEF65015.1| extracellular solute-binding protein family 3 [Streptococcus suis 89/1591] gi|329306666|gb|AEB81082.1| extracellular solute-binding protein family 3 [Streptococcus suis ST3] Length = 279 Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 47/181 (25%), Positives = 87/181 (48%), Gaps = 6/181 (3%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQY 80 TN+ + I RG L+ G+ + F + G+++G ++D R ++ + D I++ Sbjct: 39 TNSDQVQAIIDRGVLRVGVKQDVPNFGYKNPDTGEFEGMEIDIARKIADELGVD---IEF 95 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 P+ A+ R L + Q+D++ +T+ E L F Y D GF+++K GI + Sbjct: 96 TPVTAQTRGPLLDNGQVDMVIAT--FTITEERKLLYNFTTPYYTDAVGFLVNKDSGIKTF 153 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + L G +I V G+ T ++ + + + E+ + RAHR DA++ D S Sbjct: 154 TDLDGKTIGVAQGSITRTLISKLADKYGISVNFAELGSYPELSVSLRAHRTDAFSVDQSI 213 Query: 201 L 201 L Sbjct: 214 L 214 >gi|303253934|ref|ZP_07340055.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae BS455] gi|302599110|gb|EFL66135.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae BS455] Length = 264 Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 55/205 (26%), Positives = 96/205 (46%), Gaps = 10/205 (4%) Query: 1 MYKDFFVSILCLIILF---FTSFSTNASILGDIKKRGFLKCGINTGLVGFA-EVKANGDW 56 M K FF+S L LI LF T + + DI+KRG L G+ + F + G + Sbjct: 1 MKKKFFLSAL-LISLFGLAATKPVQADTSVADIQKRGELVVGVKQDVPNFGYKDPKTGTY 59 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G + D + ++ + K++Y+P+ A+ R L ++Q+D+ +T+ E Sbjct: 60 SGIETDLAKMVADEL---KVKVRYVPVTAQTRGPLLDNEQVDM--DIATFTITDERKKLY 114 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F Y D GF+++K I + L+G +I V G+ T+ + + K + + + Sbjct: 115 NFTSPYYTDASGFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLTFKFVEL 174 Query: 177 ERVEEIDAAYRAHRCDAYTGDISAL 201 E+ + AHR DA++ D S L Sbjct: 175 GSYPELITSLHAHRIDAFSVDRSIL 199 >gi|328956549|ref|YP_004373935.1| major cell-binding factor [Carnobacterium sp. 17-4] gi|328672873|gb|AEB28919.1| major cell-binding factor [Carnobacterium sp. 17-4] Length = 274 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 54/208 (25%), Positives = 94/208 (45%), Gaps = 8/208 (3%) Query: 30 IKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 IK+ G LK G+ + F + G+ +GF++D + ++ I DP I+ P+ AK R Sbjct: 45 IKEAGVLKVGVKEDVPNFGLKNTDTGEIEGFEIDIAKKIAEDILGDPDAIELTPVTAKTR 104 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 L + ++D++ +T+ E F Y D G ++ K K + + GA++ Sbjct: 105 GPLLDNGEVDMVIAT--FTVTEERKETYNFSDAYYEDAVGLLVKKDKNYEGLKDMDGANV 162 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 V +TT +A + +++ + EI AA + R DA++ D S L Sbjct: 163 GVAQSSTTSEAIASEAEQYDIAVEFSEYATYPEIKAALDSGRVDAFSVDRSILAGYL--- 219 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTE 236 D +E ILPD + A + +TE Sbjct: 220 DDSTE--ILPDRFATQDYGIATKKTNTE 245 >gi|240013150|ref|ZP_04720063.1| putative ABC transporter, periplasmic binding protein, amino acid [Neisseria gonorrhoeae DGI18] gi|240116885|ref|ZP_04730947.1| putative ABC transporter, periplasmic binding protein, amino acid [Neisseria gonorrhoeae PID1] gi|240120221|ref|ZP_04733183.1| putative ABC transporter, periplasmic binding protein, amino acid [Neisseria gonorrhoeae PID24-1] Length = 284 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 63/235 (26%), Positives = 111/235 (47%), Gaps = 16/235 (6%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 +S S+ A+ + IK++G ++ G+ F V ANG +GFDV+ + L+ + P K Sbjct: 32 SSQSSGAATVAAIKEKGVIRIGVFGDKPPFGYVDANGKNQGFDVEIAKDLAKDLLGSPDK 91 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++++ A R ++S ++D++ N +T E + + F G + K K I Sbjct: 92 VEFVLTEAANRVEYVRSGKVDLILAN--FTQTPERAEAVDFADPYMKVALGVVSPKNKPI 149 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV----FERVEEIDAAYRAHRCDA 193 + ++QL ++ V GTT AD F K HP V F++ E A + R A Sbjct: 150 TDMAQLKDQTLLVNKGTT-----ADAF---FTKSHPEVKLLKFDQNTETFDALKDGRGVA 201 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 D + L+A N P+ V + ++ +APA+ +G+ + N V+ AM Sbjct: 202 LAHDNALLWAWAKEN--PNFEVAIGNLGPAEFIAPAVQKGNADLLNWVNGEIAAM 254 >gi|59802322|ref|YP_209034.1| putative ABC transporter, periplasmic binding protein, amino acid [Neisseria gonorrhoeae FA 1090] gi|239999903|ref|ZP_04719827.1| putative ABC transporter, periplasmic binding protein, amino acid [Neisseria gonorrhoeae 35/02] gi|240015593|ref|ZP_04722133.1| putative ABC transporter, periplasmic binding protein, amino acid [Neisseria gonorrhoeae FA6140] gi|240081799|ref|ZP_04726342.1| putative ABC transporter, periplasmic binding protein, amino acid [Neisseria gonorrhoeae FA19] gi|240114683|ref|ZP_04728745.1| putative ABC transporter, periplasmic binding protein, amino acid [Neisseria gonorrhoeae PID18] gi|240122519|ref|ZP_04735475.1| putative ABC transporter, periplasmic binding protein, amino acid [Neisseria gonorrhoeae PID332] gi|240126633|ref|ZP_04739519.1| putative ABC transporter, periplasmic binding protein, amino acid [Neisseria gonorrhoeae SK-92-679] gi|240127229|ref|ZP_04739890.1| putative ABC transporter, periplasmic binding protein, amino acid [Neisseria gonorrhoeae SK-93-1035] gi|260441510|ref|ZP_05795326.1| putative ABC transporter, periplasmic binding protein, amino acid [Neisseria gonorrhoeae DGI2] gi|291044873|ref|ZP_06570582.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|293397951|ref|ZP_06642157.1| glutamine transport system substrate-binding protein [Neisseria gonorrhoeae F62] gi|59719217|gb|AAW90622.1| putative ABC transporter, periplasmic binding protein, amino acid [Neisseria gonorrhoeae FA 1090] gi|291011767|gb|EFE03763.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|291611897|gb|EFF40966.1| glutamine transport system substrate-binding protein [Neisseria gonorrhoeae F62] gi|317165198|gb|ADV08739.1| putative ABC transporter, periplasmic binding protein, amino acid [Neisseria gonorrhoeae TCDC-NG08107] Length = 284 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 63/235 (26%), Positives = 111/235 (47%), Gaps = 16/235 (6%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 +S S+ A+ + IK++G ++ G+ F V ANG +GFDV+ + L+ + P K Sbjct: 32 SSQSSGAATVAAIKEKGVIRIGVFGDKPPFGYVDANGKNQGFDVEIAKDLAKDLLGSPDK 91 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++++ A R ++S ++D++ N +T E + + F G + K K I Sbjct: 92 VEFVLTEAANRVEYVRSGKVDLILAN--FTQTPERAEAVDFADPYMKVALGVVSPKNKPI 149 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV----FERVEEIDAAYRAHRCDA 193 + ++QL ++ V GTT AD F K HP V F++ E A + R A Sbjct: 150 TDMAQLKDQTLLVNKGTT-----ADAF---FTKSHPEVKLLKFDQNTETFDALKDGRGVA 201 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 D + L+A N P+ V + ++ +APA+ +G+ + N V+ AM Sbjct: 202 LAHDNALLWAWAKEN--PNFEVAIGNLGPAEFIAPAVQKGNADLLNWVNGEIAAM 254 >gi|268595712|ref|ZP_06129879.1| antigenic protein [Neisseria gonorrhoeae 35/02] gi|268597898|ref|ZP_06132065.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] gi|268549101|gb|EEZ44519.1| antigenic protein [Neisseria gonorrhoeae 35/02] gi|268551686|gb|EEZ46705.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] Length = 282 Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 63/235 (26%), Positives = 111/235 (47%), Gaps = 16/235 (6%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 +S S+ A+ + IK++G ++ G+ F V ANG +GFDV+ + L+ + P K Sbjct: 30 SSQSSGAATVAAIKEKGVIRIGVFGDKPPFGYVDANGKNQGFDVEIAKDLAKDLLGSPDK 89 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++++ A R ++S ++D++ N +T E + + F G + K K I Sbjct: 90 VEFVLTEAANRVEYVRSGKVDLILAN--FTQTPERAEAVDFADPYMKVALGVVSPKNKPI 147 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV----FERVEEIDAAYRAHRCDA 193 + ++QL ++ V GTT AD F K HP V F++ E A + R A Sbjct: 148 TDMAQLKDQTLLVNKGTT-----ADAF---FTKSHPEVKLLKFDQNTETFDALKDGRGVA 199 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 D + L+A N P+ V + ++ +APA+ +G+ + N V+ AM Sbjct: 200 LAHDNALLWAWAKEN--PNFEVAIGNLGPAEFIAPAVQKGNADLLNWVNGEIAAM 252 >gi|315634945|ref|ZP_07890227.1| ABC superfamily ATP binding cassette transporter, binding protein [Aggregatibacter segnis ATCC 33393] gi|315476497|gb|EFU67247.1| ABC superfamily ATP binding cassette transporter, binding protein [Aggregatibacter segnis ATCC 33393] Length = 284 Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 59/222 (26%), Positives = 105/222 (47%), Gaps = 9/222 (4%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 T +T+++I +K+ G ++ G+ + F V + G +GFDV+ +A++ + D +K Sbjct: 31 TELATSSTI-EQLKQAGKVRVGVFSDKPPFGYVDSQGKSQGFDVEIAKAITKDLLGDENK 89 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 +Y+ + A R L S ++DI+ N T R + A +P G + I Sbjct: 90 AEYVLVEAANRVEYLTSNKVDIILANFTVTPARAEVVDFA-KPYMKV-ALGVVSKDGAVI 147 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + V+QL G ++ + GTT + YF + + FE+ E A R R DA D Sbjct: 148 TDVNQLKGKTLLINKGTTADA----YFTKNYPDIKLLKFEQNTETFEALRDGRGDALAHD 203 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + L+A N + V + ++ + +APA+ +GD E N Sbjct: 204 NTLLFAWAKENSGFT--VGVKNLGDQDFIAPAVKKGDVELLN 243 >gi|308063955|gb|ADO05842.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter pylori Sat464] Length = 277 Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 66/266 (24%), Positives = 119/266 (44%), Gaps = 20/266 (7%) Query: 10 LCLIILFFTSFSTNASILGD----IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 L LI L F++ S + D IK+RG LK G+ + F V + G ++G+DV + Sbjct: 14 LVLIALAFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGYDVVIAK 73 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ + D +KI+++P+ A R L++ ++DI+ N T RE + A +P Y Sbjct: 74 RMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTHTKEREKVVDFA-KP--YMK 130 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 ++ K I ++ +L + V GTT + YF + + FE+ E A Sbjct: 131 VALGVISKDGVIKNIEELENKELIVNKGTTADF----YFTKNYPNIKLLKFEQNTETFLA 186 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 ++ A D + L A P + + + K +APAI +G+ + ++ W Sbjct: 187 LLNNKAIALAHDNTLLLA--WIKQHPEFKLGITSLGDKDVIAPAIKKGNPK---LLEWLD 241 Query: 246 YAMVTAEELGITQKNINQVSKDTTNP 271 M + I+ + + K+T P Sbjct: 242 NEMDSL----ISSDFLKEAYKETLEP 263 >gi|268602559|ref|ZP_06136726.1| antigenic protein [Neisseria gonorrhoeae PID1] gi|268586690|gb|EEZ51366.1| antigenic protein [Neisseria gonorrhoeae PID1] Length = 274 Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 61/235 (25%), Positives = 110/235 (46%), Gaps = 16/235 (6%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 +S S+ A+ + IK++G ++ G+ F V ANG +GFDV+ + L+ + P K Sbjct: 22 SSQSSGAATVAAIKEKGVIRIGVFGDKPPFGYVDANGKNQGFDVEIAKDLAKDLLGSPDK 81 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++++ A R ++S ++D++ N +T E + + F G + K K I Sbjct: 82 VEFVLTEAANRVEYVRSGKVDLILAN--FTQTPERAEAVDFADPYMKVALGVVSPKNKPI 139 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV----FERVEEIDAAYRAHRCDA 193 + ++QL ++ V GTT + A K HP V F++ E A + R A Sbjct: 140 TDMAQLKDQTLLVNKGTTAD--------AFFTKSHPEVKLLKFDQNTETFDALKDGRGVA 191 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 D + L+A N P+ V + ++ +APA+ +G+ + N V+ AM Sbjct: 192 LAHDNALLWAWAKEN--PNFEVAIGNLGPAEFIAPAVQKGNADLLNWVNGEIAAM 244 >gi|254492739|ref|ZP_05105910.1| antigenic protein [Neisseria gonorrhoeae 1291] gi|268600327|ref|ZP_06134494.1| antigenic protein [Neisseria gonorrhoeae PID18] gi|268681108|ref|ZP_06147970.1| antigenic protein [Neisseria gonorrhoeae PID332] gi|268685214|ref|ZP_06152076.1| antigenic protein [Neisseria gonorrhoeae SK-92-679] gi|268685588|ref|ZP_06152450.1| antigenic protein [Neisseria gonorrhoeae SK-93-1035] gi|226511779|gb|EEH61124.1| antigenic protein [Neisseria gonorrhoeae 1291] gi|268584458|gb|EEZ49134.1| antigenic protein [Neisseria gonorrhoeae PID18] gi|268621392|gb|EEZ53792.1| antigenic protein [Neisseria gonorrhoeae PID332] gi|268625498|gb|EEZ57898.1| antigenic protein [Neisseria gonorrhoeae SK-92-679] gi|268625872|gb|EEZ58272.1| antigenic protein [Neisseria gonorrhoeae SK-93-1035] Length = 274 Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 63/235 (26%), Positives = 111/235 (47%), Gaps = 16/235 (6%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 +S S+ A+ + IK++G ++ G+ F V ANG +GFDV+ + L+ + P K Sbjct: 22 SSQSSGAATVAAIKEKGVIRIGVFGDKPPFGYVDANGKNQGFDVEIAKDLAKDLLGSPDK 81 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++++ A R ++S ++D++ N +T E + + F G + K K I Sbjct: 82 VEFVLTEAANRVEYVRSGKVDLILAN--FTQTPERAEAVDFADPYMKVALGVVSPKNKPI 139 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV----FERVEEIDAAYRAHRCDA 193 + ++QL ++ V GTT AD F K HP V F++ E A + R A Sbjct: 140 TDMAQLKDQTLLVNKGTT-----ADAF---FTKSHPEVKLLKFDQNTETFDALKDGRGVA 191 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 D + L+A N P+ V + ++ +APA+ +G+ + N V+ AM Sbjct: 192 LAHDNALLWAWAKEN--PNFEVAIGNLGPAEFIAPAVQKGNADLLNWVNGEIAAM 244 >gi|167036205|ref|YP_001671436.1| extracellular solute-binding protein [Pseudomonas putida GB-1] gi|166862693|gb|ABZ01101.1| extracellular solute-binding protein family 3 [Pseudomonas putida GB-1] Length = 290 Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 62/223 (27%), Positives = 101/223 (45%), Gaps = 21/223 (9%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L IK R L G+ T F V G + GFD D R L+ + D +K++++ + Sbjct: 39 SYLETIKARDKLIVGVFTDKPPFGFVDEKGRYVGFDTDIGRRLAKDLLGDENKVEFVAVE 98 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 R LQS ++D++ N T R+ ++ P Q I+ + + L+ Sbjct: 99 PASRIPFLQSDKVDLILANMTVTPERKEAVDFT-NPNLRVAVQA-IVADGSPVQKLDDLA 156 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHP----IVFERVEEIDAAYRAHRCDAYTGDISA 200 +I V GTT ++ L K HP + FE+ E A R DAY D Sbjct: 157 DKTIIVTTGTTADIWLT--------KNHPDWKLLKFEKNSESLQALATGRGDAYAQDNLI 208 Query: 201 LYALKLTNDRPSEHVILPDII-SKSPLAPAIIQGDTE---WYN 239 L++ N + +LP+++ ++P+APA+ +G+TE W N Sbjct: 209 LFSWAKQN---PGYRVLPELLGDEAPIAPAVKKGNTELRDWVN 248 >gi|56697500|ref|YP_167868.1| glutamate/aspartate ABC transporter, periplasmic substrate-binding protein [Ruegeria pomeroyi DSS-3] gi|56679237|gb|AAV95903.1| glutamate/aspartate ABC transporter, periplasmic substrate-binding protein [Ruegeria pomeroyi DSS-3] Length = 287 Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 55/226 (24%), Positives = 94/226 (41%), Gaps = 6/226 (2%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK---IQYLPL 83 L I G + G V FA + N G+ +D C + A+ + K I+Y+P+ Sbjct: 29 LAKIDASGEIVIGHRESSVPFAYLDENQKPVGYSIDLCMKIVEAVSAELGKELSIKYVPV 88 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 N K R + + ID+ +T L R+ + + P T+ G ++ K GISSV+ L Sbjct: 89 NPKTRIALMANGTIDLECGSTTNNLTRQEQV--EYLPTTFITGTKLMVRKGSGISSVADL 146 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 G ++ + GTT E + + + + E + R D Y D L+ Sbjct: 147 DGKAVALAQGTTNERAVKAAIETMGLDVKVLPVRDHAEGMLSLETDRVDVYATDHILLFG 206 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 L + P ++ D +S P A +++ D + +V A V Sbjct: 207 LIAKSKTPDAFEVVGDFLSFDPYA-LMVRRDDSAFELVGKKALAAV 251 >gi|283954480|ref|ZP_06372000.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Campylobacter jejuni subsp. jejuni 414] gi|283794097|gb|EFC32846.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Campylobacter jejuni subsp. jejuni 414] Length = 259 Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 60/204 (29%), Positives = 96/204 (47%), Gaps = 8/204 (3%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDP 75 F++ + L IK +G L G+ + +A + +A G+ KGF+VD + L+ +I D Sbjct: 21 FSNANAAEGKLESIKAKGQLIVGVKNDVPHYALLDQATGEIKGFEVDVAKLLAKSILGDD 80 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 KI+ + +NAK R L + ID + +T+ E F Y D G ++ K+K Sbjct: 81 KKIKLVAVNAKTRGPLLDNGSIDAVIAT--FTITPERKRIYNFSEPYYQDAVGLLVLKEK 138 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 S++ + GA+I V TT+ + + K + F I AA A R DA++ Sbjct: 139 NYKSLADMKGANIGVAQAATTKKAIGEAAKKIGVDVKFSEFPDYPSIKAALDAKRVDAFS 198 Query: 196 GDISALYALKLTNDRPSEHVILPD 219 D S L L +D+ ILPD Sbjct: 199 VDKSIL--LGYIDDKSE---ILPD 217 >gi|262204220|ref|YP_003275428.1| extracellular solute-binding protein family 3 protein [Gordonia bronchialis DSM 43247] gi|262087567|gb|ACY23535.1| extracellular solute-binding protein family 3 [Gordonia bronchialis DSM 43247] Length = 340 Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 41/136 (30%), Positives = 70/136 (51%), Gaps = 9/136 (6%) Query: 25 SILGDIKKRGFLKCGINTG--LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 + + DI G L G++ G L F + GD +GFDVD R ++ AIF DP ++++ Sbjct: 95 TTMADIVAHGRLIVGLDIGSNLFSFRD-PMTGDIRGFDVDLSREITRAIFGDPGRVEFRV 153 Query: 83 LNAKERFLALQSKQIDILSRNTDWTL--LREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 L++ ER AL++ +D++ + T LR+IS + Y Q + + I+ Sbjct: 154 LSSAERVEALRTGAVDVVVKTMSITCDRLRDISFSAPY----YVASQRILAVQNSAITGP 209 Query: 141 SQLSGASICVQAGTTT 156 +QL+G +C G T+ Sbjct: 210 AQLAGKRVCSARGATS 225 >gi|52144760|ref|YP_082068.1| amino acid ABC transporter, periplasmic solute-binding protein [Bacillus cereus E33L] gi|51978229|gb|AAU19779.1| amino acid ABC transporter, periplasmic solute-binding protein [Bacillus cereus E33L] Length = 286 Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 62/227 (27%), Positives = 101/227 (44%), Gaps = 16/227 (7%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 IK+RG L + T F V +G GF++D + + + D SK++++P+ A R Sbjct: 41 IKERGELVVAVFTDKPPFGYVDKDGKNVGFEIDMAKRFAKDLLGDESKVKFVPVEAASRI 100 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 LQS ++D + N T R+ + P Q ++ I SV L G + Sbjct: 101 PYLQSDKVDFVLANMTATDERKKVVDFT-NPHLKVAVQ-VLVKDGSPIQSVKDLEGKKVI 158 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIV-FERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 V GTT AD + NMK ++ F++ E A + R DAY D L L N Sbjct: 159 VTKGTT-----ADIYLTKNMKNVELIKFDKNTEALQALKDGRADAYAQD--NLVLLSWAN 211 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 P H++ + +A A+ +G+ E ++ W + + E+LG Sbjct: 212 KNPGFHLLKDKLGGDDLIAIAVKKGNKEIHD---WVNKEL---EKLG 252 >gi|116750584|ref|YP_847271.1| extracellular solute-binding protein [Syntrophobacter fumaroxidans MPOB] gi|116699648|gb|ABK18836.1| extracellular solute-binding protein, family 3 [Syntrophobacter fumaroxidans MPOB] Length = 295 Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 62/258 (24%), Positives = 116/258 (44%), Gaps = 13/258 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K F S L++++ + + A S++ I++ G + G G V F + G W Sbjct: 2 MRKLFGASAAALLLMWTANTACPAHAESVMDKIERTGKVNMGHREGAVPFGYMDEKGQWV 61 Query: 58 GFDVDFCRALSSAIFDD-PSKIQYL--PLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 GFD+D L+ A+ KI+Y+ P+N K R + + +D+ +T TL RE ++ Sbjct: 62 GFDMDLGAELAKALETKFGKKIEYIKTPMNPKNRIPLVANGTVDVGIGSTTITLEREEAV 121 Query: 115 GLAFRPITYF-DGQGFIMHKKKGISSVSQLSGASICVQAGTTTE---LTLADYFKAHNMK 170 + + YF G ++ K I QL+G + V +G+T L A K + Sbjct: 122 DFS---LPYFLTGTKLLVPKGSPIRDYRQLAGKKVGVGSGSTANIKGLQKAIDAKTIDPP 178 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 ++FE + + + DAY D + L ++ +P + ++ ++ P + Sbjct: 179 CEMVLFEDHAKGFLGLQQGKIDAYFTDEAMLAGMRAKAQKPDDWEVVAPFLTYEPYGFIL 238 Query: 231 IQGDTEWYNIVSWTHYAM 248 + D++W + V+ T M Sbjct: 239 PRDDSKWRDFVNATLIRM 256 >gi|324324589|gb|ADY19849.1| amino acid ABC transporter, periplasmic solute-binding protein [Bacillus thuringiensis serovar finitimus YBT-020] Length = 286 Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 62/227 (27%), Positives = 101/227 (44%), Gaps = 16/227 (7%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 IK+RG L + T F V +G GF++D + + + D SK++++P+ A R Sbjct: 41 IKERGELVVAVFTDKPPFGYVDKDGKNVGFEIDMAKRFAKDLLGDESKVKFVPVEAASRI 100 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 LQS ++D + N T R+ + P Q ++ I SV L G + Sbjct: 101 PYLQSDKVDFVLANMTATDERKKVVDFT-NPHLKVAVQ-VLVKDGSPIQSVKDLEGKKVI 158 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIV-FERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 V GTT AD + NMK ++ F++ E A + R DAY D L L N Sbjct: 159 VTKGTT-----ADIYLTKNMKNVELIKFDKNTEALQALKDGRADAYAQD--NLVLLSWAN 211 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 P H++ + +A A+ +G+ E ++ W + + E+LG Sbjct: 212 KNPGFHLLKDKLGGDDLIAIAVKKGNKEVHD---WVNKEL---EKLG 252 >gi|283853865|ref|ZP_06371081.1| extracellular solute-binding protein family 3 [Desulfovibrio sp. FW1012B] gi|283570740|gb|EFC18784.1| extracellular solute-binding protein family 3 [Desulfovibrio sp. FW1012B] Length = 272 Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 66/239 (27%), Positives = 106/239 (44%), Gaps = 17/239 (7%) Query: 24 ASILGDIKKRGFLKCGINTGL--VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 A L DIK RG L G+ G+ + K N GF++D AL+ + K++ Sbjct: 24 AGKLDDIKSRGALVAGVKDSQPPFGYVDEKTN-QVVGFEIDLMEALAKRL---GVKLELK 79 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF-DGQGFIMHKKKGISSV 140 P+ + R L IDI++ RE + + ITYF GQ ++ K G++SV Sbjct: 80 PVTSSTRIPMLGQGAIDIVAATMTHKKEREDQVDFS---ITYFMTGQKLLVKKGGGVNSV 136 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + L G + G+T+E + K I FE E A + + A T D S Sbjct: 137 ADLGGKKVGSVKGSTSEQNV----KKAQPDCTVISFETYPEAFLALKQGKVQAMTTDESI 192 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L +K ++D P I+ + IS P + + D+++ + V + A++ E G QK Sbjct: 193 LVGIKNSDDNPDAWDIVGEYISPEPYGLGLPENDSDFRDFV---NLALMNMWETGEYQK 248 >gi|111019187|ref|YP_702159.1| amino acid ABC transporter ATP-binding protein [Rhodococcus jostii RHA1] gi|110818717|gb|ABG94001.1| probable ABC amino acid transporter, binding component [Rhodococcus jostii RHA1] Length = 326 Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 7/130 (5%) Query: 30 IKKRGFLKCGINTG--LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 I+ RG L G++TG L+ F + A G +GFDVD R ++ +F DP +++Y L + Sbjct: 86 IRARGRLVVGLDTGSNLMSFRD-PATGAVQGFDVDIAREIARDLFGDPDRLEYRILTSAN 144 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM-HKKKGISSVSQLSGA 146 R ALQ +DI+++ T R+ + + YF+ Q ++ K I S + L G Sbjct: 145 REKALQESMVDIVAKTMTITCDRKERVAFSSE---YFEAQQRVLVVKGSPIRSAADLDGK 201 Query: 147 SICVQAGTTT 156 +CV GTT+ Sbjct: 202 RVCVVRGTTS 211 >gi|327463114|gb|EGF09435.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK1] Length = 270 Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 46/182 (25%), Positives = 86/182 (47%), Gaps = 6/182 (3%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQ 79 S+ + + DI+KRG L G+ + F + + + + G ++D + ++ + KI Sbjct: 29 SSTSQQVKDIQKRGVLNVGVKQDVPNFGYLNPDSNTYSGIEIDIAKKIAKEL---GVKIN 85 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 Y+P+ A+ R L + Q+D++ +T+ E F Y D GF+++K I Sbjct: 86 YVPVTAQTRGPLLDNGQVDMVIAT--FTITDERKEIYNFTTPYYTDASGFLVNKSSKIKD 143 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 V L+ +I V G+ T+ L + + + + + E+ + RAHR DA + D S Sbjct: 144 VKDLNNKTIGVVQGSITQTLLEEIAQEKKLNFKYVELGSYPELAVSLRAHRIDAISVDKS 203 Query: 200 AL 201 L Sbjct: 204 IL 205 >gi|325978425|ref|YP_004288141.1| amino acid ABC transporter substrate binding protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325178353|emb|CBZ48397.1| amino acid ABC transporter, substrate binding protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 292 Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 66/258 (25%), Positives = 115/258 (44%), Gaps = 22/258 (8%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + A L +IK+ G +K G+ + F V GD++G+DV F L+ + D ++Y Sbjct: 41 TAKARTLDEIKESGTIKIGVFSDKKPFGYVDDKGDYQGYDVYFADRLAKDLGVD---VEY 97 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKKGIS 138 + ++ R L S ++DI+ N T R ++ L + + G + + IS Sbjct: 98 VAVDPASRVEYLTSAKVDIILANFTVTDERAEQVDFALPYMKVAL----GVVSPSSQLIS 153 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 SV L G ++ V GTT E YF+ + K + + +++ E A R DA + D Sbjct: 154 SVDDLEGKTLIVGKGTTAET----YFEKNYPKVNLLKYDQYSEAYQALLDGRGDALSTDN 209 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 + + A L N V + + +APA+ +G+T ++ W + + T E Sbjct: 210 TEVLAWALEN--KGYEVGITSLGDTDTIAPAVQKGNTA---LLDWINDEIKTLGEENFFH 264 Query: 259 KNINQ----VSKDTTNPD 272 K+ + V D NPD Sbjct: 265 KDYEETLEPVYGDAANPD 282 >gi|315124414|ref|YP_004066418.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315018136|gb|ADT66229.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 259 Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 59/204 (28%), Positives = 96/204 (47%), Gaps = 8/204 (3%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDP 75 F++ + L IK +G L G+ + +A + +A G+ KGF+VD + L+ +I D Sbjct: 21 FSNANAAEGKLESIKSKGQLIVGVKNDVPHYALLDQATGEIKGFEVDVAKLLAKSILGDD 80 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 KI+ + +NAK R L + +D + +T+ E F Y D G ++ K+K Sbjct: 81 KKIKLVAVNAKTRGPLLDNGSVDAVIAT--FTITPERKRIYNFSEPYYQDAIGLLVLKEK 138 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 S++ + GA+I V TT+ + + K + F I AA A R DA++ Sbjct: 139 NYKSLADMEGANIGVAQAATTKKAIGEAAKKIGIDVKFNEFPDYPSIKAALDAKRVDAFS 198 Query: 196 GDISALYALKLTNDRPSEHVILPD 219 D S L L +D+ ILPD Sbjct: 199 VDKSIL--LGYVDDKSE---ILPD 217 >gi|75765505|pdb|1XT8|A Chain A, Crystal Structure Of Cysteine-Binding Protein From Campylobacter Jejuni At 2.0 A Resolution gi|75765506|pdb|1XT8|B Chain B, Crystal Structure Of Cysteine-Binding Protein From Campylobacter Jejuni At 2.0 A Resolution Length = 292 Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 54/227 (23%), Positives = 103/227 (45%), Gaps = 12/227 (5%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 S S + L IK+ G ++ G+ F V G+ +G+D+ + ++ +F D +K Sbjct: 28 NSDSKTLNSLDKIKQNGVVRIGVFGDKPPFGYVDEKGNNQGYDIALAKRIAKELFGDENK 87 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKK 135 +Q++ + A R L+S ++DI+ N T R ++ + + G + K Sbjct: 88 VQFVLVEAANRVEFLKSNKVDIILANFTQTPQRAEQVDFCSPYMKVAL----GVAVPKDS 143 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I+SV L ++ + GTT + YF + + +++ E AA R DA + Sbjct: 144 NITSVEDLKDKTLLLNKGTTADA----YFTQNYPNIKTLKYDQNTETFAALMDKRGDALS 199 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 D + L+A D P + + ++ +K +APA+ +GD E + Sbjct: 200 HDNTLLFA--WVKDHPDFKMGIKELGNKDVIAPAVKKGDKELKEFID 244 >gi|327474725|gb|EGF20130.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK408] gi|327490282|gb|EGF22070.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK1058] Length = 270 Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 46/182 (25%), Positives = 86/182 (47%), Gaps = 6/182 (3%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQ 79 S+ + + DI+KRG L G+ + F + + + + G ++D + ++ + KI Sbjct: 29 SSTSQQVKDIQKRGVLNVGVKQDVPNFGYLNPDSNTYSGIEIDIAKKIAKEL---GVKIN 85 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 Y+P+ A+ R L + Q+D++ +T+ E F Y D GF+++K I Sbjct: 86 YVPVTAQTRGPLLDNGQVDMVIAT--FTITDERKEIYNFTTPYYTDASGFLVNKSSKIKD 143 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 V L+ +I V G+ T+ L + + + + + E+ + RAHR DA + D S Sbjct: 144 VKDLNNKTIGVVQGSITQTLLEEIAQEKKLNFKYVELGSYPELAVSLRAHRIDAISVDKS 203 Query: 200 AL 201 L Sbjct: 204 IL 205 >gi|83950533|ref|ZP_00959266.1| glutamate/aspartate ABC transporter, periplasmic substrate-binding protein [Roseovarius nubinhibens ISM] gi|83838432|gb|EAP77728.1| glutamate/aspartate ABC transporter, periplasmic substrate-binding protein [Roseovarius nubinhibens ISM] Length = 287 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 53/226 (23%), Positives = 96/226 (42%), Gaps = 6/226 (2%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK---IQYLPL 83 L I G + G V FA + N G+ +D C + A+ + K I+Y+P+ Sbjct: 29 LEKIAASGEIVLGHRESSVPFAYLDENQKPIGYSIDLCHKIVEAVSAELGKEISIKYVPV 88 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 N K R + + ID+ +T L R+ + + P T+ G ++ K GI+++ L Sbjct: 89 NPKTRIALMANGTIDLECGSTTNNLTRQEQV--EYLPTTFITGTKLLVRKDGGIATIDDL 146 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 G ++ + GTT E + + + + E + R DAY+ D L+ Sbjct: 147 DGKAVALAQGTTNERAVKAAIEEKGLDVKILPVRDHAEGMLSLETDRVDAYSTDHILLFG 206 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 L + P + ++ D +S P A +++ D + +V A V Sbjct: 207 LISKSKSPDDFAVVGDFLSFDPYA-LMVRRDDSAFELVGKKALAAV 251 >gi|121613532|ref|YP_001000595.1| bifunctional adhesin/ABC transporter aspartate/glutamate-binding protein [Campylobacter jejuni subsp. jejuni 81-176] gi|157415178|ref|YP_001482434.1| bifunctional adhesin/ABC transporter aspartate/glutamate-binding protein [Campylobacter jejuni subsp. jejuni 81116] gi|167005526|ref|ZP_02271284.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Campylobacter jejuni subsp. jejuni 81-176] gi|146325049|sp|A1VZQ4|PEB1A_CAMJJ RecName: Full=Major cell-binding factor; AltName: Full=CBF1; AltName: Full=PEB1; Flags: Precursor gi|87248925|gb|EAQ71888.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Campylobacter jejuni subsp. jejuni 81-176] gi|157386142|gb|ABV52457.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Campylobacter jejuni subsp. jejuni 81116] gi|307747819|gb|ADN91089.1| Major cell-binding factor [Campylobacter jejuni subsp. jejuni M1] gi|315932598|gb|EFV11529.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Campylobacter jejuni subsp. jejuni 327] Length = 259 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 59/204 (28%), Positives = 96/204 (47%), Gaps = 8/204 (3%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDP 75 F++ + L IK +G L G+ + +A + +A G+ KGF+VD + L+ +I D Sbjct: 21 FSNANAAEGKLESIKSKGQLIVGVKNDVPHYALLDQATGEIKGFEVDVAKLLAKSILGDD 80 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 KI+ + +NAK R L + +D + +T+ E F Y D G ++ K+K Sbjct: 81 KKIKLVAVNAKTRGPLLDNGSVDAVIAT--FTITPERKRIYNFSEPYYQDAIGLLVLKEK 138 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 S++ + GA+I V TT+ + + K + F I AA A R DA++ Sbjct: 139 NYKSLADMKGANIGVAQAATTKKAIGEAAKKIGIDVKFSEFPDYPSIKAALDAKRVDAFS 198 Query: 196 GDISALYALKLTNDRPSEHVILPD 219 D S L L +D+ ILPD Sbjct: 199 VDKSIL--LGYVDDKSE---ILPD 217 >gi|86150788|ref|ZP_01069004.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Campylobacter jejuni subsp. jejuni 260.94] gi|85841958|gb|EAQ59204.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Campylobacter jejuni subsp. jejuni 260.94] Length = 259 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 59/204 (28%), Positives = 96/204 (47%), Gaps = 8/204 (3%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDP 75 F++ + L IK +G L G+ + +A + +A G+ KGF+VD + L+ +I D Sbjct: 21 FSNANAAEGKLESIKSKGQLIVGVKNDVPHYALLDQATGEIKGFEVDVAKLLAKSILGDD 80 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 KI+ + +NAK R L + +D + +T+ E F Y D G ++ K+K Sbjct: 81 KKIKLVAVNAKTRGPLLDNGSVDAVIAT--FTITPERKRIYNFSEPYYQDAIGLLVLKEK 138 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 S++ + GA+I V TT+ + + K + F I AA A R DA++ Sbjct: 139 NYKSLADMEGANIGVAQAATTKKAIGEAAKKIGIDVKFNEFPDYPSIKAALDAKRVDAFS 198 Query: 196 GDISALYALKLTNDRPSEHVILPD 219 D S L L +D+ ILPD Sbjct: 199 VDKSIL--LGYVDDKSE---ILPD 217 >gi|283956264|ref|ZP_06373744.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Campylobacter jejuni subsp. jejuni 1336] gi|283791984|gb|EFC30773.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Campylobacter jejuni subsp. jejuni 1336] Length = 259 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 59/204 (28%), Positives = 96/204 (47%), Gaps = 8/204 (3%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDP 75 F++ + L IK +G L G+ + +A + +A G+ KGF+VD + L+ +I D Sbjct: 21 FSNANAAEGKLESIKSKGQLIVGVKNDVPHYALLDQATGEIKGFEVDVAKLLAKSILGDD 80 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 KI+ + +NAK R L + +D + +T+ E F Y D G ++ K+K Sbjct: 81 KKIKLVAVNAKTRGPLLDNGSVDAVIAT--FTITPERKRIYNFSEPYYQDAIGLLVLKEK 138 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 S++ + GA+I V TT+ + + K + F I AA A R DA++ Sbjct: 139 NYKSLADMKGANIGVAQAATTKKAIGEAAKKIGIDVKFSEFPDYPSIKAALDAKRVDAFS 198 Query: 196 GDISALYALKLTNDRPSEHVILPD 219 D S L L +D+ ILPD Sbjct: 199 VDKSIL--LGYVDDKSE---ILPD 217 >gi|116617275|ref|YP_817646.1| amino acid ABC transporter periplasmic protein [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116096122|gb|ABJ61273.1| amino acid ABC transporter substrate-binding protein, PAAT family [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 281 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 63/225 (28%), Positives = 104/225 (46%), Gaps = 16/225 (7%) Query: 22 TNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 TN S + +IKK G +K + L + V NG +G+D++ + ++ D K++ Sbjct: 33 TNQSGRTVKEIKKSGEIKIAVFGDLKPYGWVDKNGKRQGYDIELAKKVAK---DLGVKVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 Y+ +NA R AL S ++D+ N T R+ + A +P G K K I+ Sbjct: 90 YVQVNANARVDALNSGKVDLALANFTVTPERKKVIDFA-KPYMKV-SIGVASKKSKLITK 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 V QL G + V GTT E YF + K + F+ + AA + R DA T D S Sbjct: 148 VDQLHGKKLIVNKGTTAET----YFTKNYTKASLLKFDSKTQQFAALKDGRADAITDDNS 203 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 L+A P V + + +S ++P + +G+ +++ WT Sbjct: 204 YLFA--WVKSHPDYKVGIKKLGEQSYISPGVQKGNK---SLLKWT 243 >gi|228477470|ref|ZP_04062106.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus salivarius SK126] gi|228250905|gb|EEK10093.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus salivarius SK126] Length = 224 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/180 (23%), Positives = 87/180 (48%), Gaps = 6/180 (3%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYL 81 N++ + I K+G L G+ + F A + ++G ++D + ++ + K+ + Sbjct: 38 NSAAIQKIVKKGTLNVGVKQDVPNFGYYSAKTNTYQGMEIDLAKKIAKEL---KVKVNFT 94 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 + + R + + ID+L +T+ E A Y+D GF++ K G +S Sbjct: 95 AVTPQTREALMDNGTIDMLIAT--YTITDERKASYAMSTPYYYDQIGFLVQTKSGYKKLS 152 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L+G +I V G++ + + +Y A+N+K++ + E+ + A+R DA+ GD S L Sbjct: 153 DLNGKTIGVSQGSSAKAAVEEYASANNLKFNYVQLGSYPELAVSLYAYRIDAFAGDKSIL 212 >gi|315928341|gb|EFV07656.1| Putative amino-acid transporter periplasmic solute-binding protein [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 279 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 54/226 (23%), Positives = 103/226 (45%), Gaps = 12/226 (5%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 S S + L IK+ G ++ G+ F V G+ +G+D+ + ++ +F D +K Sbjct: 23 NSDSKTLNSLDKIKQNGVVRIGVFGDKPPFGYVDEKGNNQGYDIALAKRIAKELFGDENK 82 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKK 135 +Q++ + A R L+S ++DI+ N T R ++ + + G + K Sbjct: 83 VQFVLVEAANRVEFLKSNKVDIILANFTQTPQRAEQVDFCSPYMKVAL----GVAVPKDS 138 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I+SV L ++ + GTT + YF + + +++ E AA R DA + Sbjct: 139 NITSVEDLKDKTLLLNKGTTADA----YFTQNYPNIKTLKYDQNTETFAALMDKRGDALS 194 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 D + L+A D P + + ++ +K +APA+ +GD E + Sbjct: 195 HDNTLLFA--WVKDHPDFKMGIKELGNKDVIAPAVKKGDKELKEFI 238 >gi|296130894|ref|YP_003638144.1| extracellular solute-binding protein family 3 [Cellulomonas flavigena DSM 20109] gi|296022709|gb|ADG75945.1| extracellular solute-binding protein family 3 [Cellulomonas flavigena DSM 20109] Length = 318 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 49/179 (27%), Positives = 85/179 (47%), Gaps = 11/179 (6%) Query: 25 SILGDIKKRGFLKCGINTGLVGF-AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 S + +I+ RG L G++ + A G +GFD+D R ++ AI DP I++ + Sbjct: 73 STMDEIRARGNLVVGVSADTLRMGARNPFTGQIEGFDIDVARQVAQAILGDPDAIRFRVI 132 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 A +R L++ ++D+++R +T+ E +AF + GQ ++ + S+ L Sbjct: 133 TAGDRIPVLENHEVDLVTRA--FTMNCERWDQIAFSAEYFTAGQKVLVSTESQAQSIEDL 190 Query: 144 SGASICVQAGTTTELTLADY-FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 G +C GTTT L +Y +A + H A ++ R DA TGD + L Sbjct: 191 DGQRVCAPEGTTTLERLDEYDVEAVGARTHSACL-------ALFQQGRVDAITGDDTVL 242 >gi|315927529|gb|EFV06862.1| Putative peptide ABC-transport system periplasmic peptide-binding protein [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 264 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 59/204 (28%), Positives = 96/204 (47%), Gaps = 8/204 (3%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDP 75 F++ + L IK +G L G+ + +A + +A G+ KGF+VD + L+ +I D Sbjct: 26 FSNANAAEGKLESIKSKGQLIVGVKNDVPHYALLDQATGEIKGFEVDVAKLLAKSILGDD 85 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 KI+ + +NAK R L + +D + +T+ E F Y D G ++ K+K Sbjct: 86 KKIKLVAVNAKTRGPLLDNGSVDAVIAT--FTITPERKRIYNFSEPYYQDAIGLLVLKEK 143 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 S++ + GA+I V TT+ + + K + F I AA A R DA++ Sbjct: 144 KYKSLADMKGANIGVAQAATTKKAIGEAAKKIGIDVKFSEFPDYPSIKAALDAKRVDAFS 203 Query: 196 GDISALYALKLTNDRPSEHVILPD 219 D S L L +D+ ILPD Sbjct: 204 VDKSIL--LGYVDDKSE---ILPD 222 >gi|86150666|ref|ZP_01068887.1| surface antigen, CjaA [Campylobacter jejuni subsp. jejuni CF93-6] gi|88596418|ref|ZP_01099655.1| CjaA protein [Campylobacter jejuni subsp. jejuni 84-25] gi|218562598|ref|YP_002344377.1| putative amino-acid transporter periplasmic solute-binding protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|85838847|gb|EAQ56115.1| surface antigen, CjaA [Campylobacter jejuni subsp. jejuni CF93-6] gi|88191259|gb|EAQ95231.1| CjaA protein [Campylobacter jejuni subsp. jejuni 84-25] gi|112360304|emb|CAL35100.1| putative amino-acid transporter periplasmic solute-binding protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|315930170|gb|EFV09291.1| Putative amino-acid transporter periplasmic solute-binding protein [Campylobacter jejuni subsp. jejuni 305] Length = 279 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 54/226 (23%), Positives = 103/226 (45%), Gaps = 12/226 (5%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 S S + L IK+ G ++ G+ F V G+ +G+D+ + ++ +F D +K Sbjct: 23 NSDSKTLNSLDKIKQNGVVRIGVFGDKPPFGYVDEKGNNQGYDIALAKRIAKELFGDENK 82 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKK 135 +Q++ + A R L+S ++DI+ N T R ++ + + G + K Sbjct: 83 VQFVLVEAANRVEFLKSNKVDIILANFTQTPQRAEQVDFCSPYMKVAL----GVAVPKDS 138 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I+SV L ++ + GTT + YF + + +++ E AA R DA + Sbjct: 139 NITSVEDLKDKTLLLNKGTTADA----YFTQNYPNIKTLKYDQNTETFAALMDKRGDALS 194 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 D + L+A D P + + ++ +K +APA+ +GD E + Sbjct: 195 HDNTLLFA--WVKDHPDFKMGIKELGNKDVIAPAVKKGDKELKEFI 238 >gi|307257780|ref|ZP_07539537.1| hypothetical protein appser10_17650 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306863686|gb|EFM95612.1| hypothetical protein appser10_17650 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 298 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 54/223 (24%), Positives = 105/223 (47%), Gaps = 10/223 (4%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 ST + IK++G ++ G+ F V ANG +GFDV+ + +++ + P K+++ Sbjct: 52 STAKDSVAQIKEKGVIRIGVFGDKPPFGHVDANGKSQGFDVEIAKEIANDLLGSPDKVEF 111 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD-GQGFIMHKKKGISS 139 + A R L+S ++D++ N T R + A Y + G + K IS Sbjct: 112 VLTEAANRVEYLKSNKVDLILANFTKTPERAEVVDFA---TPYMNVALGVVSPKGALISD 168 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + QL G ++ V GTT + YF ++ + + + F++ E A + R A D + Sbjct: 169 LKQLEGKTLLVNKGTTADA----YFTKNHPEINLLKFDQNTETFDALKDGRGVALAHDNA 224 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 ++A N P+ V + + +APA+ +G+ ++++ Sbjct: 225 LVWAWAKEN--PTFDVAIGSVGPAEQIAPAVKKGNQALLDVIN 265 >gi|227547864|ref|ZP_03977913.1| amino acid ABC superfamily ATP binding cassette transporter binding protein [Corynebacterium lipophiloflavum DSM 44291] gi|227080049|gb|EEI18012.1| amino acid ABC superfamily ATP binding cassette transporter binding protein [Corynebacterium lipophiloflavum DSM 44291] Length = 332 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 39/136 (28%), Positives = 76/136 (55%), Gaps = 5/136 (3%) Query: 21 STNASILGDIKKRGFLKCGINTG--LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 +T A + D+ +RG + G++ L+ + +V A GD +GF++D R +S IF DP ++ Sbjct: 75 ATPAERIPDVVERGRIVVGVDQSQYLLSYRDVTA-GDLRGFEIDLAREVSRDIFGDPDRV 133 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + + +++R +LQ+ ++DI+ R T R S+ + +T + ++ + +GIS Sbjct: 134 DFRFVGSQQRAQSLQNGEVDIVIRTMSVTPTRVASVDFSTPYLTSY--VRLLVPRDRGIS 191 Query: 139 SVSQLSGASICVQAGT 154 S L G ++CV G+ Sbjct: 192 SEDDLPGTTVCVVDGS 207 >gi|307126808|ref|YP_003878839.1| glutamine ABC transporter substrate-binding protein/Major cell binding factor [Streptococcus pneumoniae 670-6B] gi|306483870|gb|ADM90739.1| ABC transporter substrate-binding protein - glutamine transport/Major cell binding factor [Streptococcus pneumoniae 670-6B] Length = 269 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 74/279 (26%), Positives = 131/279 (46%), Gaps = 22/279 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFA-EVKANGDW 56 M K FF+S L LI LF + + + + DI+KRG L G+ + F + G + Sbjct: 1 MKKKFFLSAL-LISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTY 59 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G + D + ++ + KI+Y+P+ A+ R L ++Q+D+ +T+ E Sbjct: 60 SGIETDLAKMVADEL---KVKIRYVPVTAQTRGPLLDNEQVDM--DIATFTITDERKKLY 114 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F Y D GF+++K I + L+G +I V G+ T+ + + K +K+ + Sbjct: 115 NFTSPYYTDASGFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVEL 174 Query: 177 ERVEEIDAAYRAHRCDAYTGDISAL--YALK---LTND--RPSEHVILPDIISKSPLAPA 229 E+ + AHR DA++ D S L Y K L +D +PS++ I+ S + L Sbjct: 175 GSYPELITSLHAHRIDAFSVDHSILSGYTSKRTALLDDSFKPSDYSIVTK-KSNTELNDY 233 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 + T+W +V ++ VT+ + I Q+ +DT Sbjct: 234 LDNLVTKWSRMVVCRNFMTVTSSNHLV----IPQIKEDT 268 >gi|307708313|ref|ZP_07644780.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus mitis NCTC 12261] gi|307615759|gb|EFN94965.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus mitis NCTC 12261] Length = 264 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 54/205 (26%), Positives = 98/205 (47%), Gaps = 10/205 (4%) Query: 1 MYKDFFVSILCLIILFFTS---FSTNASILGDIKKRGFLKCGINTGLVGFA-EVKANGDW 56 M K FF+S L + +L + + S+ DI+KRG L G+ + F + G + Sbjct: 1 MKKKFFLSALLISLLGLAAAKPVQADTSV-ADIQKRGELVVGVKQDVPNFGYKDPKTGTY 59 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G + D + ++ + K++Y+P+ A+ R L ++Q+D+ +T+ E Sbjct: 60 SGIETDLAKMVADEL---KVKVRYVPVTAQTRGPLLDNEQVDM--DIATFTITDERKKLY 114 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F Y D GF+++K I S+ L+G +I V G+ T+ + + K +K+ + Sbjct: 115 NFTSPYYTDASGFLVNKSAKIKSIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVEL 174 Query: 177 ERVEEIDAAYRAHRCDAYTGDISAL 201 E+ + AHR DA++ D S L Sbjct: 175 GSYPELITSLHAHRIDAFSVDRSIL 199 >gi|120608912|ref|YP_968590.1| extracellular solute-binding protein [Acidovorax citrulli AAC00-1] gi|120587376|gb|ABM30816.1| amino acid ABC transporter substrate-binding protein, PAAT family [Acidovorax citrulli AAC00-1] Length = 305 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 59/250 (23%), Positives = 110/250 (44%), Gaps = 8/250 (3%) Query: 11 CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSS 69 CL+ + + L IK+ G + G + F+ K GD GF D C + Sbjct: 19 CLLAHGAAASAQEIDTLARIKQTGVIHIGNRDSSIPFSYSPKGGGDPVGFSNDICLKIVE 78 Query: 70 AI---FDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 A+ P+ ++QY LN+ R +Q+ +D+ T +++R+ + AF P + Sbjct: 79 AVKAKLGLPALRVQYTLLNSLNRIPLMQNGTVDLDCATTTNSVVRQQMV--AFAPSHFVA 136 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 G + K GI+S+S L+G ++ AG+T+ L Y +A + + + + Sbjct: 137 GITVAVKKNSGINSLSDLAGKTVATVAGSTSVQLLRTYKRAEALDVRELSGKDTADAFLL 196 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII-SKSPLAPAIIQGDTEWYNIVSWT 244 R DAY D L L ++ P E+ +L D++ + P + D ++ +V T Sbjct: 197 LANGRADAYVLDDVQLAGLIASSPNPGEYRMLRDVVLRQEPYGIMFRKNDPQFEALVDET 256 Query: 245 HYAMVTAEEL 254 ++ + E+ Sbjct: 257 VTQLMKSGEM 266 >gi|309379285|emb|CBX22058.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 284 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 63/235 (26%), Positives = 109/235 (46%), Gaps = 16/235 (6%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 S S+ A + IK++G ++ G+ F V ANG +GFDV+ + L+ + P K Sbjct: 32 ASQSSGAVTVAAIKEKGVIRIGVFGDKPPFGYVDANGKNQGFDVEIAKDLAKDLLGSPDK 91 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++++ A R ++S ++D++ N +T E + + F G + K K I Sbjct: 92 VEFVLTEAANRVEYVRSGKVDLILAN--FTKTPERAEAVDFADPYMKVALGVVSPKGKPI 149 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV----FERVEEIDAAYRAHRCDA 193 + ++QL ++ V GTT AD F K HP V F++ E A + R A Sbjct: 150 TDIAQLKDQTLLVNKGTT-----ADAF---FTKSHPEVKLLKFDQNTETFDALKDGRGAA 201 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 D + L+A N P+ V + ++ +APA+ +G+ + N V+ AM Sbjct: 202 LAHDNALLWAWAKEN--PNFEVAIGNLGPAEFIAPAVQKGNADLLNWVNGEIAAM 254 >gi|42779689|ref|NP_976936.1| glutamine ABC transporter, glutamine-binding protein [Bacillus cereus ATCC 10987] gi|42735606|gb|AAS39544.1| glutamine ABC transporter, glutamine-binding protein [Bacillus cereus ATCC 10987] Length = 286 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 61/228 (26%), Positives = 102/228 (44%), Gaps = 16/228 (7%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 +IK+RG L + T F V +G GF++D + + + D SK++++P+ A R Sbjct: 40 EIKERGELVVAVFTDKPPFGYVDKDGKNVGFEIDMAKRFAKDLLGDESKVKFVPVEAASR 99 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 LQS ++D + N T R+ + P Q ++ I SV L G + Sbjct: 100 IPYLQSDKVDFVLANMTATDERKKVVDFT-NPHLKVAVQ-VLVKDGSPIQSVKDLEGKKV 157 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIV-FERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 V GTT AD + NMK ++ F++ E A + R D+Y D L L Sbjct: 158 IVTKGTT-----ADIYLTKNMKNVELIKFDKNTEALQALKDGRADSYAQD--NLVLLSWA 210 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 N P H++ + +A A+ +G+ E ++ W + + E+LG Sbjct: 211 NKNPGFHLLKDKLGGDDLIAIAVKKGNKEVHD---WVNKEL---EKLG 252 >gi|315635238|ref|ZP_07890515.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Aggregatibacter segnis ATCC 33393] gi|315475984|gb|EFU66739.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Aggregatibacter segnis ATCC 33393] Length = 285 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 8/215 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L I+K G ++ G+ + F V A G +GFDV+ +A+ + D +K++++ ++ Sbjct: 38 SSLEQIQKDGKVRIGVFSDKPPFGYVDAQGKSQGFDVEIGKAIGKDLLGDENKVEFVLVD 97 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 A R L SK++DI+ N T R+ + A P G + I+ + QL Sbjct: 98 AANRAEYLLSKKVDIILANFTVTPARKEVVDFA-NPYMKV-ALGVVSKDGSVITDLEQLK 155 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G ++ V GTT ++ +F + + FE+ E A R R DA + D + L+A Sbjct: 156 GKTLIVDKGTTADI----FFTKNYPDVKLLKFEQNTETFEALRDGRGDALSNDNTFLFAW 211 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 N P V + + + +APA+ + E N Sbjct: 212 AKQN--PGYTVGVKNFGDQDVIAPAVRKDAPELLN 244 >gi|222152719|ref|YP_002561895.1| glutamine-binding protein [Streptococcus uberis 0140J] gi|222113531|emb|CAR41318.1| putative glutamine-binding protein precursor [Streptococcus uberis 0140J] Length = 271 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 58/224 (25%), Positives = 103/224 (45%), Gaps = 21/224 (9%) Query: 5 FFVSILCLIILFFTSFSTNASIL------GDIKKRGFLKCGINTGLVGFAEVKAN-GDWK 57 FF + L ++F S + + L IKK G L+ G+ + F A+ G ++ Sbjct: 9 FFCLMTLLTLIFMPKASADDNQLLKTKSIQTIKKAGVLRVGVKQDVPNFGYYSADTGKYE 68 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G +VD R ++ + P + + A+ R L + Q+DI+ +T+ E + Sbjct: 69 GMEVDLARKIAKKLKVKPV---FTAVTAQTREALLDNGQLDIII--ATYTITPERQANYS 123 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F Y D GF++++ + I S+ L+ +I V G+TT+ + +Y KAH++ + + Sbjct: 124 FSIPYYRDEVGFLVNQSEKIDSIKDLNHRTIGVAQGSTTKAAIEEYGKAHHLDFKFVQLG 183 Query: 178 RVEEIDAAYRAHRCDAYTGDISAL--YALKLTNDRPSEHVILPD 219 E+ + + R A++ D S L Y K T ILPD Sbjct: 184 SYPELAISLYSKRIQAFSVDKSILSGYVSKQT-------AILPD 220 >gi|86150617|ref|ZP_01068839.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Campylobacter jejuni subsp. jejuni CF93-6] gi|88596800|ref|ZP_01100037.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Campylobacter jejuni subsp. jejuni 84-25] gi|218562540|ref|YP_002344319.1| bifunctional adhesin/ABC transporter aspartate/glutamate-binding protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|123336799|sp|Q0P9X8|PEB1A_CAMJE RecName: Full=Major cell-binding factor; AltName: Full=CBF1; AltName: Full=PEB1; Flags: Precursor gi|388565|gb|AAA02919.1| major cell-binding factor [Campylobacter jejuni subsp. jejuni 81-176] gi|85838878|gb|EAQ56145.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Campylobacter jejuni subsp. jejuni CF93-6] gi|88191641|gb|EAQ95613.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Campylobacter jejuni subsp. jejuni 84-25] gi|112360246|emb|CAL35041.1| aspartate/glutamate-binding ABC transporter protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284926154|gb|ADC28506.1| bifunctional adhesin/ABC transporter aspartate/glutamate-binding protein [Campylobacter jejuni subsp. jejuni IA3902] Length = 259 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 59/204 (28%), Positives = 96/204 (47%), Gaps = 8/204 (3%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDP 75 F++ + L IK +G L G+ + +A + +A G+ KGF+VD + L+ +I D Sbjct: 21 FSNANAAEGKLESIKSKGQLIVGVKNDVPHYALLDQATGEIKGFEVDVAKLLAKSILGDD 80 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 KI+ + +NAK R L + +D + +T+ E F Y D G ++ K+K Sbjct: 81 KKIKLVAVNAKTRGPLLDNGSVDAVIAT--FTITPERKRIYNFSEPYYQDAIGLLVLKEK 138 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 S++ + GA+I V TT+ + + K + F I AA A R DA++ Sbjct: 139 KYKSLADMKGANIGVAQAATTKKAIGEAAKKIGIDVKFSEFPDYPSIKAALDAKRVDAFS 198 Query: 196 GDISALYALKLTNDRPSEHVILPD 219 D S L L +D+ ILPD Sbjct: 199 VDKSIL--LGYVDDKSE---ILPD 217 >gi|326318880|ref|YP_004236552.1| family 3 extracellular solute-binding protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375716|gb|ADX47985.1| extracellular solute-binding protein family 3 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 303 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 55/212 (25%), Positives = 96/212 (45%), Gaps = 7/212 (3%) Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSR 102 F + + G G+ VD C+A+ I + +++Y P++A ER L++ +ID+ Sbjct: 53 FVDAQNGGKAAGYSVDLCQAVVEDIKNTLKLKDLEVKYRPVSAAERIPKLEAGEIDLECG 112 Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162 +T T R+ + AF P + G ++ K +V L+G ++ V G+T+E L Sbjct: 113 STTNTKARQERV--AFGPTMFVAGIRVLVPKGTKADTVQDLAGMTVAVSKGSTSE-KLLT 169 Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222 A+ +K VF+ +E A RA A+ D S L L N + ++S Sbjct: 170 QLTANEVKATVKVFDNNDEAFKALRAGTVKAFAQDDSLLLGLVARNKAQDALALSNFVLS 229 Query: 223 KSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 P A + + DT +V T + T+ E+ Sbjct: 230 VEPYAIMVRKSDTALMAVVDRTLGKLYTSREI 261 >gi|325694844|gb|EGD36749.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK150] Length = 270 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 46/182 (25%), Positives = 86/182 (47%), Gaps = 6/182 (3%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQ 79 ST + + I+KRG L G+ + F + + + + G ++D + ++ + KI Sbjct: 29 STTSQQVKAIQKRGVLNVGVKQDVPNFGYLNPDSNTYSGLEIDIAKKIAKEL---GVKIN 85 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 Y+P+ A+ R L + Q+D++ +T+ E F Y D GF+++K I+ Sbjct: 86 YVPVTAQTRGPLLDNGQVDMVIAT--FTITDERKEIYNFTTPYYTDASGFLVNKSSKITD 143 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 V L+ +I V G+ T+ L + + + + + E+ + RAHR DA + D S Sbjct: 144 VKDLNNKTIGVVQGSITQTLLEEIAQEKKLNFKYVELGSYPELAVSLRAHRIDAISVDKS 203 Query: 200 AL 201 L Sbjct: 204 IL 205 >gi|56420512|ref|YP_147830.1| glutamine ABC transporter glutamine-binding protein [Geobacillus kaustophilus HTA426] gi|261420185|ref|YP_003253867.1| extracellular solute-binding protein family 3 [Geobacillus sp. Y412MC61] gi|297529846|ref|YP_003671121.1| extracellular solute-binding protein family 3 [Geobacillus sp. C56-T3] gi|319766997|ref|YP_004132498.1| extracellular solute-binding protein family 3 [Geobacillus sp. Y412MC52] gi|56380354|dbj|BAD76262.1| glutamine ABC transporter (glutamine-binding protein) [Geobacillus kaustophilus HTA426] gi|261376642|gb|ACX79385.1| extracellular solute-binding protein family 3 [Geobacillus sp. Y412MC61] gi|297253098|gb|ADI26544.1| extracellular solute-binding protein family 3 [Geobacillus sp. C56-T3] gi|317111863|gb|ADU94355.1| extracellular solute-binding protein family 3 [Geobacillus sp. Y412MC52] Length = 281 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 57/227 (25%), Positives = 105/227 (46%), Gaps = 13/227 (5%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPS 76 T+ +TN L IK+RG L G+ L F + G +GFD+D + L+ I D + Sbjct: 40 TAKATNT--LEKIKQRGKLIVGVKYDLNLFGLKNPETGKVEGFDIDIAKGLAKKILGDEN 97 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 KI+ + +K R L + +ID + T+ E + F + + GQ ++ K Sbjct: 98 KIELKEVTSKTRIPMLNNGEIDAIIATM--TITEERKKEVDFSDVYFMAGQSLLVKKDSP 155 Query: 137 ISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I+SV L G ++ G+T+ A+ + + + + FE E A +A + DA T Sbjct: 156 INSVKDLKKGMTVLTAKGSTS----AENIRKVAPQVNVLEFENYAEAFTALKAGQGDALT 211 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 D + L+ + + + +L + ++ P A+ +GD E +++ Sbjct: 212 TDNALLWGMA---KQDPNYRVLDETFTEEPYGIAVRKGDKELLQVIN 255 >gi|157884161|pdb|2V25|A Chain A, Structure Of The Campylobacter Jejuni Antigen Peb1a, An Aspartate And Glutamate Receptor With Bound Aspartate gi|157884162|pdb|2V25|B Chain B, Structure Of The Campylobacter Jejuni Antigen Peb1a, An Aspartate And Glutamate Receptor With Bound Aspartate Length = 232 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 58/194 (29%), Positives = 92/194 (47%), Gaps = 8/194 (4%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L IK +G L G+ + +A + +A G+ KGF+VD + L+ +I D KI+ + +NA Sbjct: 3 LESIKSKGQLIVGVKNDVPHYALLDQATGEIKGFEVDVAKLLAKSILGDDKKIKLVAVNA 62 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 K R L + +D + +T+ E F Y D G ++ K+K S++ + G Sbjct: 63 KTRGPLLDNGSVDAVIAT--FTITPERKRIYNFSEPYYQDAIGLLVLKEKKYKSLADMKG 120 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 A+I V TT+ + + K + F I AA A R DA++ D S L L Sbjct: 121 ANIGVAQAATTKKAIGEAAKKIGIDVKFSEFPDYPSIKAALDAKRVDAFSVDKSIL--LG 178 Query: 206 LTNDRPSEHVILPD 219 +D+ ILPD Sbjct: 179 YVDDKSE---ILPD 189 >gi|329667258|gb|AEB93206.1| ABC transporter solute-binding component [Lactobacillus johnsonii DPC 6026] Length = 284 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 66/238 (27%), Positives = 107/238 (44%), Gaps = 27/238 (11%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 IKKRG LK + L + V +G G+DV R L+ + K++++ +NA R Sbjct: 46 IKKRGTLKVAVFGDLPPYGWVNKDGKRVGYDVRLARELAKEM---GVKVKFVQVNANNRV 102 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 L + + DI+ N T R+ + A +P G + K K I++V+QL G + Sbjct: 103 DTLNANKADIVLANFTVTPERKQVVDFA-KPYMKV-SVGVVSPKSKPITNVNQLKGKKVI 160 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V GTT E +YF + + F+ + A + R A D S LYA N Sbjct: 161 VTKGTTAE----NYFTSKQPDVDLLKFDSKTQQFNAMKNGRAAALADDNSYLYAWVKNN- 215 Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 P V + + S +APA+ +G+ ++ WT+ K+IN+++KD Sbjct: 216 -PKYTVGIKHLGPNSYIAPAVKKGNKS---LLDWTN-------------KHINKLNKD 256 >gi|104784168|ref|YP_610666.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas entomophila L48] gi|95113155|emb|CAK17883.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas entomophila L48] Length = 290 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 61/223 (27%), Positives = 102/223 (45%), Gaps = 21/223 (9%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L IK R L G+ T F V +G + GFD D R + + D +K++++ + Sbjct: 39 SYLETIKARDKLIVGVFTDKPPFGFVDESGRYVGFDTDIGRRFAKELLGDENKVEFVAVE 98 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 R LQS ++D++ N T R+ ++ P Q I+ + + L+ Sbjct: 99 PASRIPFLQSDKVDLILANMTVTPERKEAVDFT-NPNLRVAVQA-IVADGSPVQKLDDLA 156 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHP----IVFERVEEIDAAYRAHRCDAYTGDISA 200 +I V GTT ++ L K HP + FE+ E AA + R +AY D Sbjct: 157 DKTIIVTTGTTADIWLT--------KNHPDWKLLKFEKNTESLAALASGRGEAYAQDNLI 208 Query: 201 LYALKLTNDRPSEHVILPDII-SKSPLAPAIIQGDTE---WYN 239 L++ N + +LP ++ ++P+APA+ +G+TE W N Sbjct: 209 LFSWAKQN---PGYRVLPQLLGEEAPIAPAVKKGNTELRDWVN 248 >gi|325576799|ref|ZP_08147414.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Haemophilus parainfluenzae ATCC 33392] gi|325161005|gb|EGC73123.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Haemophilus parainfluenzae ATCC 33392] Length = 285 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 8/215 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L I+K G ++ G+ + F V A G +GFDV+ +A+ + D +K++++ ++ Sbjct: 38 SSLEQIQKDGKVRIGVFSDKPPFGYVDAQGKSQGFDVEIGKAIGKDLLGDENKVEFVLVD 97 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 A R L SK++DI+ N T R+ + A P G + I+ + QL Sbjct: 98 AANRAEYLLSKKVDIILANFTVTPARKEVVDFA-NPYMKV-ALGVVSKDGSVITDLEQLK 155 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G ++ V GTT ++ +F + + FE+ E A R R DA + D + L+A Sbjct: 156 GKTLIVDKGTTADI----FFTKNYPDVKLLKFEQNTETFEALRDGRGDALSNDNTFLFAW 211 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 N P V + + + +APA+ + E N Sbjct: 212 AKQN--PGYTVGVKNFGDQDVIAPAVRKDAPELLN 244 >gi|42519232|ref|NP_965162.1| ABC transporter solute-binding component [Lactobacillus johnsonii NCC 533] gi|41583520|gb|AAS09128.1| ABC transporter solute-binding component [Lactobacillus johnsonii NCC 533] Length = 284 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 65/238 (27%), Positives = 107/238 (44%), Gaps = 27/238 (11%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 IKKRG LK + L + V +G G+DV R L+ + K++++ +NA R Sbjct: 46 IKKRGTLKVAVFGDLPPYGWVNKDGKRVGYDVRLARELAKEM---GVKVKFVQVNANNRV 102 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 L + + DI+ N T R+ + A +P G + K K I++V+QL G + Sbjct: 103 DTLNANKADIVLANFTVTPERKQVVDFA-KPYMKV-SVGVVSPKSKPITNVNQLKGKKVI 160 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V GTT E +YF + + F+ + A + R A D S LYA + Sbjct: 161 VTKGTTAE----NYFTSKQPDVDLLKFDSKTQQFNAMKNGRAAALADDNSYLYA--WVKN 214 Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 P V + + S +APA+ +G+ ++ WT+ K+IN+++KD Sbjct: 215 NPKYTVGIKHLGPNSYIAPAVKKGNKS---LLDWTN-------------KHINKLNKD 256 >gi|227890100|ref|ZP_04007905.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus johnsonii ATCC 33200] gi|227849544|gb|EEJ59630.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus johnsonii ATCC 33200] Length = 284 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 65/238 (27%), Positives = 107/238 (44%), Gaps = 27/238 (11%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 IKKRG LK + L + V +G G+DV R L+ + K++++ +NA R Sbjct: 46 IKKRGTLKVAVFGDLPPYGWVNKDGKRVGYDVRLARELAKEM---GVKVKFVQVNANNRV 102 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 L + + DI+ N T R+ + A +P G + K K I++V+QL G + Sbjct: 103 DTLNANKADIVLANFTVTSERKQVVDFA-KPYMKV-SVGVVSPKSKPITNVNQLKGKKVI 160 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V GTT E +YF + + F+ + A + R A D S LYA + Sbjct: 161 VTKGTTAE----NYFTSKQPDVDLLKFDSKTQQFNAMKNGRAAALADDNSYLYA--WVKN 214 Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 P V + + S +APA+ +G+ ++ WT+ K+IN+++KD Sbjct: 215 NPKYTVGIKHLGPNSYIAPAVKKGNKS---LLDWTN-------------KHINKLNKD 256 >gi|322411346|gb|EFY02254.1| glutamine-binding protein precursor [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 266 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 45/181 (24%), Positives = 91/181 (50%), Gaps = 6/181 (3%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQY 80 T ++L I K+G L+ G+ + F + ++G ++D + ++ A+ P Q+ Sbjct: 27 TTPNVLKQITKKGQLRIGVKQDVPNFGYYHPKHRQFEGMEIDIAKKIAKALDVKP---QF 83 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + A+ R L ++Q+D++ +T+ E AF Y D GF++ K I+S+ Sbjct: 84 TAVTAQTREALLDNQQLDMII--ATYTITPERQKQYAFSNPYYLDEIGFLVKKSDAITSI 141 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 +L+ +I V G+TT+ + +Y KAH++ + + E+ + A+R +++ D S Sbjct: 142 KELNQKTIGVAQGSTTKNAIEEYGKAHDLSFSFVQLGSYPELAISLYANRIASFSVDKSI 201 Query: 201 L 201 L Sbjct: 202 L 202 >gi|253827634|ref|ZP_04870519.1| glutamine ABC transporter, periplasmic glutamine- binding protein glnH [Helicobacter canadensis MIT 98-5491] gi|253511040|gb|EES89699.1| glutamine ABC transporter, periplasmic glutamine- binding protein glnH [Helicobacter canadensis MIT 98-5491] Length = 273 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 12/213 (5%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 IK++G + G+ + F + G GFDV R ++ + D SK+++ + A R Sbjct: 34 IKQKGVITIGVFSDKPPFGFINKEGGNDGFDVQVSRQIAKDLLGDSSKVKFELVEAASRV 93 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 L+S ++D++ N T RE + A + Y ++ K I S+ L G + Sbjct: 94 EFLKSGKVDVIMANFTKTPEREAVVDFA---LPYMKVALGVVSKDGAIKSIEDLKGKKLI 150 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V GTT + YF ++ + + +++ E A + R DA D ++A N Sbjct: 151 VNKGTTADF----YFSKNHPEIELLKYDQNTETFLALKDGRGDALAHDNLLVFAWAKEN- 205 Query: 210 RPSEHVILPDIISKSPLAPAIIQGDT---EWYN 239 P V + + ++ +APA+ +GD EW N Sbjct: 206 -PGFEVGITKLGNEDVIAPAVKKGDKELLEWLN 237 >gi|57237749|ref|YP_178997.1| bifunctional adhesin/ABC transporter aspartate/glutamate-binding protein [Campylobacter jejuni RM1221] gi|57166553|gb|AAW35332.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Campylobacter jejuni RM1221] gi|315058360|gb|ADT72689.1| Major cell-binding factor precursor PebA [Campylobacter jejuni subsp. jejuni S3] Length = 259 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 8/204 (3%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDP 75 F++ + L IK +G L G+ + +A + +A G+ KGF++D + L+ +I D Sbjct: 21 FSNANAAEGKLESIKSKGQLIVGVKNDVPYYALLDQATGEIKGFEIDVAKLLAKSILGDD 80 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 KI+ + +NAK R L + +D + +T+ E F Y D G ++ K+K Sbjct: 81 KKIKLVAVNAKTRGPLLDNGSVDAVIAT--FTITPERKRIYNFSEPYYQDAIGLLVLKEK 138 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 S++ + GA+I V TT+ + + K + F I AA A R DA++ Sbjct: 139 NYKSLADMKGANIGVAQAATTKKAIGEAAKKIGIDVKFSEFPDYPSIKAALDAKRVDAFS 198 Query: 196 GDISALYALKLTNDRPSEHVILPD 219 D S L L +D+ ILPD Sbjct: 199 VDKSIL--LGYVDDKSE---ILPD 217 >gi|301155146|emb|CBW14610.1| unnamed protein product [Haemophilus parainfluenzae T3T1] Length = 285 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 8/215 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L I+K G ++ G+ + F V A G +GFDV+ +A+ + D +K++++ ++ Sbjct: 38 SSLEQIQKDGKVRIGVFSDKPPFGYVDAQGKSQGFDVEIGKAIGKDLLGDENKVEFVLVD 97 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 A R L SK++DI+ N T R+ + A P G + I+ + QL Sbjct: 98 AANRAEYLLSKKVDIILANFTVTPARKEVVDFA-NPYMKV-ALGVVSKDGSVITDLEQLK 155 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G ++ V GTT ++ +F + + FE+ E A R R DA + D + L+A Sbjct: 156 GKTLIVDKGTTADI----FFTKNYPDVKLLKFEQNTETFEALRDGRGDALSNDNTFLFAW 211 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 N P V + + + +APA+ + E N Sbjct: 212 AKQN--PGYTVGVKNFGDQDVIAPAVRKDAPELLN 244 >gi|327470645|gb|EGF16101.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK330] Length = 270 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 82/173 (47%), Gaps = 6/173 (3%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 I+KRG L G+ + F + + + + G ++D + ++ + KI YLP+ A+ R Sbjct: 38 IQKRGVLNVGVKQDVPNFGYLNPDSNTYSGLEIDIAKKIAKEL---GVKINYLPVTAQTR 94 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 L + Q+D++ +T+ E F Y D GF+++K I+ V L+ +I Sbjct: 95 GPLLDNGQVDMVIAT--FTITDERKEIYNFTTPYYTDASGFLVNKSSKITDVKDLNNKTI 152 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 V G+ T+ L + + + + + E+ + RAHR DA + D S L Sbjct: 153 GVVQGSITQTLLEEIAQEKKLNFKYVELGSYPELAVSLRAHRIDAISVDKSIL 205 >gi|163791025|ref|ZP_02185446.1| amino acid ABC transporter, amino acid-binding protein [Carnobacterium sp. AT7] gi|159873670|gb|EDP67753.1| amino acid ABC transporter, amino acid-binding protein [Carnobacterium sp. AT7] Length = 273 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 46/173 (26%), Positives = 80/173 (46%), Gaps = 3/173 (1%) Query: 30 IKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 IK+ G LK G+ + F + G+ +GF++D + L+ I DP I+ P+ AK R Sbjct: 44 IKEAGVLKVGVKEDVPNFGLKNTDTGEIEGFEIDIAKKLAEEILGDPDAIELTPVTAKTR 103 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 L + ++D++ +T+ E F Y D G ++ K K + + GA+I Sbjct: 104 GPLLDNGEVDMIIAT--FTVTEERKETYNFTDAYYEDAVGLLVKKDKNYEGLKDMDGATI 161 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 V +TT + + +++ + EI AA + R DA++ D S L Sbjct: 162 GVSQSSTTAEAIEAEAEKYDIAIDFSEYATYPEIKAALDSGRVDAFSVDRSIL 214 >gi|224371421|ref|YP_002605585.1| GltI [Desulfobacterium autotrophicum HRM2] gi|223694138|gb|ACN17421.1| GltI [Desulfobacterium autotrophicum HRM2] Length = 300 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 53/239 (22%), Positives = 102/239 (42%), Gaps = 12/239 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDP 75 + + + ++L I+K G + G G V F + NG W GF +D + + F+ P Sbjct: 28 AVAGDENLLEKIEKSGEVHMGFREGSVPFGFIDKNGSWDGFGIDLGTEVVKDLEKKFNKP 87 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE--ISLGLAFRPITYFDGQGFIMHK 133 K+ P+N K R + + + + +T TL RE + L + + G ++ K Sbjct: 88 IKLVKHPMNPKTRITMVTNGMVAMGIGSTTITLAREEVVDFSLPY----FLTGTRLLVPK 143 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYHPIVFERVEEIDAAYRAHR 190 ISS + + G + + +G+T + D + ++FE + A + + Sbjct: 144 DSPISSFADIGGKRVGMGSGSTANIKGMDRAIEQGLVKPACKKVLFEEHNKGFLALQQGK 203 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 DAY D S L ++ P + I+ ++ P + +G EW + V+ + M+ Sbjct: 204 IDAYFTDASQLAGMRAKARNPQDWKIVGKYLTYEPYGFILPEGQGEWRDFVNASLIHMI 262 >gi|261404399|ref|YP_003240640.1| family 3 extracellular solute-binding protein [Paenibacillus sp. Y412MC10] gi|329929709|ref|ZP_08283395.1| putative major cell-binding factor [Paenibacillus sp. HGF5] gi|261280862|gb|ACX62833.1| extracellular solute-binding protein family 3 [Paenibacillus sp. Y412MC10] gi|328935926|gb|EGG32385.1| putative major cell-binding factor [Paenibacillus sp. HGF5] Length = 269 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 64/245 (26%), Positives = 113/245 (46%), Gaps = 24/245 (9%) Query: 8 SILCLIILFFTSF---STNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVD 62 ++L L+I+ S S + L IKKRG L G+ +T L G + A G+ +GFD+D Sbjct: 14 ALLALVIMLIASGCGGSGSTDTLEAIKKRGKLVAGVKYDTKLFGLQD-PATGNVEGFDID 72 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 +AL+ I D +K++ + +K R L++ IDI+ T+ E + F + Sbjct: 73 IAKALAKKILGDETKVELKEVTSKTRIDMLKNGDIDIIIAT--MTITEERKEQVDFSDVY 130 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP-----IVFE 177 + GQ ++ K I+ + L+ T LT+ A N++ + FE Sbjct: 131 FEAGQSLLVKKGSPITGLESLN--------KDTKVLTVKGSTSAQNIREKAPDAVILEFE 182 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 ++ A +A + DA T D S L ++ + PS ++ + + P AI +G+ E+ Sbjct: 183 NYQDAFTALKAGQGDALTTDNSILLGMQQQD--PSFELVGGN-FTDEPYGMAIKKGNPEF 239 Query: 238 YNIVS 242 V+ Sbjct: 240 VKTVN 244 >gi|205356404|ref|ZP_03223169.1| probable ABC type amino-acid transporter periplasmic solute binding protein [Campylobacter jejuni subsp. jejuni CG8421] gi|205345789|gb|EDZ32427.1| probable ABC type amino-acid transporter periplasmic solute binding protein [Campylobacter jejuni subsp. jejuni CG8421] Length = 259 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 8/204 (3%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDP 75 F++ + L IK +G L G+ + +A + + G+ KGF+VD + L+ +I D Sbjct: 21 FSNANAAEGKLESIKSKGQLIVGVKNDVPHYALLDQVTGEIKGFEVDVAKLLAKSILGDD 80 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 KI+ + +NAK R L + +D + +T+ E F Y D G ++ K+K Sbjct: 81 KKIKLVAVNAKTRGPLLDNGSVDAVIAT--FTITPERKRIYNFSEPYYQDAIGLLVLKEK 138 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 S++ + GA+I V TT+ + + K + F I AA A R DA++ Sbjct: 139 NYKSLADMKGANIGVAQAATTKKAIGEAAKKIGIDVKFSEFPDYPSIKAALDAKRVDAFS 198 Query: 196 GDISALYALKLTNDRPSEHVILPD 219 D S L L +D+ ILPD Sbjct: 199 VDKSIL--LGYVDDKSE---ILPD 217 >gi|229542367|ref|ZP_04431427.1| extracellular solute-binding protein family 3 [Bacillus coagulans 36D1] gi|229326787|gb|EEN92462.1| extracellular solute-binding protein family 3 [Bacillus coagulans 36D1] Length = 280 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 67/251 (26%), Positives = 113/251 (45%), Gaps = 22/251 (8%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 IKK G +K + L + V NG +G+DV + ++ D K++++ +NA R Sbjct: 42 IKKNGTIKIAVFGDLPPYGWVDKNGGRQGYDVALAKQVAK---DLGVKVKFVQVNANSRV 98 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 AL+S ++D++ N T R+ + A +P G + KK I++VSQL G S+ Sbjct: 99 DALKSNKVDLVLANFTITPERKQVVDFA-KPYMKV-SIGVVSPKKNPITNVSQLKGKSLI 156 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V GTT E +YF + ++ E A + R A D S LYA + Sbjct: 157 VNKGTTAE----NYFTSKQKDVKLQKYDSKTEQFNALKNGRAVALADDNSYLYA--WVKN 210 Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 P V + + +APA+ +G+ +++W + IT+ N N K+ Sbjct: 211 HPDYTVGIKTLGPNQYIAPAVKKGNKS---LLNWMNKE--------ITKLNNNGFFKNDY 259 Query: 270 NPDVQRFLGID 280 N ++ + G D Sbjct: 260 NNNLAPYFGSD 270 >gi|312864748|ref|ZP_07724979.1| major cell-binding factor [Streptococcus downei F0415] gi|311099875|gb|EFQ58088.1| major cell-binding factor [Streptococcus downei F0415] Length = 273 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 46/182 (25%), Positives = 86/182 (47%), Gaps = 6/182 (3%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 IK G LK G+ + F + D + G ++D + ++ + K+QY + A+ R Sbjct: 41 IKDAGVLKVGVKQDVPNFGYYDSKNDKYTGMEIDLAKKIADTL---GVKVQYTAVTAQTR 97 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 L + Q DI+ +T+ + + Y+D GF+++K GI++ L G +I Sbjct: 98 EALLDNGQTDIMI--ATYTINDQRKANFSISNPYYYDEIGFLVNKDSGINNPKDLDGKTI 155 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 V G+ T+ +L + + +K+ + E+ A RA+R DA++ D S L N Sbjct: 156 GVAQGSKTKASLETFASDNGIKFKYVQLGSYPELVTALRAYRVDAFSVDKSILTGYVSKN 215 Query: 209 DR 210 ++ Sbjct: 216 NK 217 >gi|194099714|ref|YP_002002849.1| Putative ABC transporter, periplasmic binding protein, amino acid [Neisseria gonorrhoeae NCCP11945] gi|193935004|gb|ACF30828.1| Putative ABC transporter, periplasmic binding protein, amino acid [Neisseria gonorrhoeae NCCP11945] Length = 284 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 62/235 (26%), Positives = 110/235 (46%), Gaps = 16/235 (6%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 +S S+ A+ + IK++G ++ G+ F V ANG +GFDV+ + L+ + P K Sbjct: 32 SSQSSGAATVAAIKEKGVIRIGVFGDKPPFGYVDANGKNQGFDVEIAKDLAKDLLGSPDK 91 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++++ A R ++S ++D++ N +T E + + F G + K K I Sbjct: 92 VEFVLTEAANRVEYVRSGKVDLILAN--FTQTPERAEAVDFADPYMKVALGVVSPKNKPI 149 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV----FERVEEIDAAYRAHRCDA 193 + ++QL ++ V GT AD F K HP V F++ E A + R A Sbjct: 150 TDMAQLKDQTLLVNKGTA-----ADAF---FTKSHPEVKLLKFDQNTETFDALKDGRGVA 201 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 D + L+A N P+ V + ++ +APA+ +G+ + N V+ AM Sbjct: 202 LAHDNALLWAWAKEN--PNFEVAIGNLGPAEFIAPAVQKGNADLLNWVNGEIAAM 254 >gi|289168422|ref|YP_003446691.1| ABC-type amino acid transporter, substrate-binding protein [Streptococcus mitis B6] gi|288907989|emb|CBJ22829.1| ABC-type amino acid transporter, substrate-binding protein [Streptococcus mitis B6] Length = 264 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 10/205 (4%) Query: 1 MYKDFFVSILCLIILFFTS---FSTNASILGDIKKRGFLKCGINTGLVGFA-EVKANGDW 56 M K FF+S L + + T+ + S+ DI+KRG L G+ + F + G + Sbjct: 1 MKKKFFLSALLISLFGLTATKPVQADTSV-ADIQKRGELVVGVKQDVPNFGYKNPKTGTY 59 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G + D + ++ + K++Y+P+ A+ R L ++Q+D+ +T+ E Sbjct: 60 SGIETDLAKMVADEL---KVKVRYVPVTAQTRGPLLDNEQVDM--DIATFTITDERKKLY 114 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F Y D GF+++K I + L+G +I V G+ T+ + + K +K+ + Sbjct: 115 NFTSPYYTDASGFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVEL 174 Query: 177 ERVEEIDAAYRAHRCDAYTGDISAL 201 E+ + AHR DA++ D S L Sbjct: 175 GSYPELITSLHAHRIDAFSVDRSIL 199 >gi|307253362|ref|ZP_07535233.1| hypothetical protein appser6_18560 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306859041|gb|EFM91083.1| hypothetical protein appser6_18560 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 298 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 54/223 (24%), Positives = 105/223 (47%), Gaps = 10/223 (4%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 ST + IK++G ++ G+ F V ANG +GFDV+ + +++ + P K+++ Sbjct: 52 STAKDSVAQIKEKGVIRIGVFGDKPPFGYVDANGKNQGFDVEIAKEIANDLLGSPDKVEF 111 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD-GQGFIMHKKKGISS 139 + A R L+S ++D++ N T R + A Y + G + K IS Sbjct: 112 VLTEAANRVEYLKSNKVDLILANFTKTPERAEVVDFA---TPYMNVALGVVSPKGALISD 168 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + QL G ++ V GTT + YF ++ + + + F++ E A + R A D + Sbjct: 169 LKQLEGKTLLVNKGTTADA----YFTKNHPEINLLKFDQNTETFDALKDGRGVALAHDNA 224 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 ++A N P+ V + + +APA+ +G+ ++++ Sbjct: 225 LVWAWAKEN--PTFDVAIGSVGPAEQIAPAVQKGNQALLDVIN 265 >gi|239814179|ref|YP_002943089.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] gi|239800756|gb|ACS17823.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] Length = 306 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 51/231 (22%), Positives = 104/231 (45%), Gaps = 5/231 (2%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK---IQYLPL 83 L +++ G + G V F+ + A + G+ ++ CR L +AI + +K I+++P+ Sbjct: 40 LAKVRESGTIAIGYRESSVPFSFLNARQEPVGYSIELCRELVTAIEEAVNKSLAIKWVPV 99 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 + R A++ +D+ +T L R+ + +F P + G ++ K I S L Sbjct: 100 TSDSRIDAVERGTVDLECGSTTSNLERQKRV--SFSPTIFVSGTKVLVKKGSPIKSFRDL 157 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 +G + V AGTT E TL + + + V + ++ + DA+ D LY Sbjct: 158 AGKRVAVTAGTTNEKTLRELSQKFRLGIDLRVARDHADSFGLVKSGQADAFATDDVLLYG 217 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 L + +++ ++ D +S P +GD + +++ T + E+ Sbjct: 218 LIARDAAKAQYEVVGDYLSYDPYGIMYRKGDAQLAKVINDTFQVLAQDGEI 268 >gi|170704112|ref|ZP_02894730.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] gi|170130978|gb|EDS99687.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] Length = 313 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 56/232 (24%), Positives = 100/232 (43%), Gaps = 6/232 (2%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK---IQYLPL 83 L ++ G + G + F+ + A G+ ++ C+AL S+I D +K I+++P+ Sbjct: 46 LAKVRSSGTIALGYRDASIPFSYLNARNQPIGYSIELCKALVSSIEDAVNKSLTIRWVPV 105 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 + R A+ S +D+ +T L R+ + AF PI + G ++ + I S L Sbjct: 106 TSDNRIDAVASGNVDLECGSTTSNLERQQRV--AFSPIIFVAGTKVMVKRGSPIRSFRDL 163 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 +G + V AGTT E L D + V + A + R DA+ D LY Sbjct: 164 AGKKVAVTAGTTNEKALRDLDARFKLGIQLQVAPDHAQGFALVASGRADAFATDDVLLYG 223 Query: 204 LKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 L N + ++ ++ D +S P + D + +V T + E+ Sbjct: 224 LIAENAGKGGQYDVVGDYLSYDPYGIMFRKDDPQLAQVVKSTFEELAVDGEI 275 >gi|125718374|ref|YP_001035507.1| polar amino acid ABC transporter amino acid-binding protein [Streptococcus sanguinis SK36] gi|125498291|gb|ABN44957.1| Polar amino acid ABC transporter, amino acid-binding protein, putative [Streptococcus sanguinis SK36] Length = 270 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 45/182 (24%), Positives = 86/182 (47%), Gaps = 6/182 (3%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQ 79 S+ + + I+KRG L G+ + F + + + + G ++D + ++ + KI Sbjct: 29 SSTSQQVKSIQKRGVLNVGVKQDVPNFGYLNPDSNTYSGLEIDIAKKIAKEL---GVKIN 85 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 Y+P+ A+ R L + Q+D++ +T+ E F Y D GF+++K I+ Sbjct: 86 YVPVTAQTRGPLLDNGQVDMVIAT--FTITDERKEIYNFTTPYYTDASGFLVNKSSKITD 143 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 V L+ +I V G+ T+ L + + + + + E+ + RAHR DA + D S Sbjct: 144 VKDLNNKTIGVVQGSITQTLLEEIAQEKKLNFKYVELGSYPELAVSLRAHRIDAISVDKS 203 Query: 200 AL 201 L Sbjct: 204 IL 205 >gi|331700617|ref|YP_004397576.1| ABC transporter periplasmic subunit [Lactobacillus buchneri NRRL B-30929] gi|329127960|gb|AEB72513.1| ABC-type transporter, periplasmic subunit family 3 [Lactobacillus buchneri NRRL B-30929] Length = 284 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 14/213 (6%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 IKK G ++ + L + V +G G+DV ++ D K++++ +NA R Sbjct: 45 IKKNGTIRIAVFGDLPPYGWVNKDGKRVGYDVTLAHQVAK---DLGVKVKFVQVNANNRV 101 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 AL S ++D++ N T R+ + A +P G + K K I+ SQL G ++ Sbjct: 102 DALNSNKVDLVLANFTVTPERKQVIDFA-KPYMKV-SVGVVSPKNKAITKASQLKGKNVI 159 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V GTT E +YF + + F+ + A + R A D S LYA + D Sbjct: 160 VTKGTTAE----NYFTSKQPDVKLLKFDSKTQQFNALKNGRGVALADDNSYLYA--WSKD 213 Query: 210 RPSEHVILPDIISKSPLAPAIIQGDT---EWYN 239 P+ V + I KS +APA+ +G+ +W N Sbjct: 214 NPNYTVGIKSIGPKSYIAPAVKKGNKSLLDWNN 246 >gi|302876277|ref|YP_003844910.1| extracellular solute-binding protein family 3 [Clostridium cellulovorans 743B] gi|307687009|ref|ZP_07629455.1| extracellular solute-binding protein family 3 [Clostridium cellulovorans 743B] gi|302579134|gb|ADL53146.1| extracellular solute-binding protein family 3 [Clostridium cellulovorans 743B] Length = 282 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 64/246 (26%), Positives = 110/246 (44%), Gaps = 15/246 (6%) Query: 1 MYKDFFV-SILCLIILFF------TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M K F V SIL +++ +S ++ S + IKK G +K G+ + F V Sbjct: 1 MKKRFKVASILTTLVIAIGVLAGCSSKTSKESSIETIKKNGVIKIGVFSDKPPFGYVDEK 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ +GFDV R + + D SK+Q++ + A R L++ ++D++ N +T+ E Sbjct: 61 GNNQGFDVYIARRFAKDLLGDESKVQFVLVEAASRVEYLETGKVDVILAN--FTVTDERK 118 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F G + + I++V QL G + V GTT E YF + Sbjct: 119 EKVDFANPYMKVALGVVSPEGDKITNVDQLKGKKLIVNKGTTAET----YFTKNYPNIEL 174 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + +++ E A + R A D + L+A N + V + S +APA+ +G Sbjct: 175 LKYDQNTEAFQALKDGRGSALAHDNTLLFAWARENKGFTTGV--ESLGSLDTIAPAVQKG 232 Query: 234 DTEWYN 239 + E N Sbjct: 233 NVELLN 238 >gi|169796304|ref|YP_001714097.1| amino acid ABC transporter periplasmic substrate-binding protein [Acinetobacter baumannii AYE] gi|215483763|ref|YP_002325988.1| Glutamine-binding protein precursor (GlnBP) [Acinetobacter baumannii AB307-0294] gi|294837744|ref|ZP_06782427.1| Glutamine-binding protein precursor (GlnBP) [Acinetobacter sp. 6013113] gi|294859369|ref|ZP_06797138.1| Glutamine-binding protein precursor (GlnBP) [Acinetobacter sp. 6013150] gi|301510868|ref|ZP_07236105.1| Glutamine-binding protein precursor (GlnBP) [Acinetobacter baumannii AB058] gi|169149231|emb|CAM87113.1| putative amino acid transport protein (ABC superfamily, peri_bind) [Acinetobacter baumannii AYE] gi|213987513|gb|ACJ57812.1| Glutamine-binding protein precursor (GlnBP) [Acinetobacter baumannii AB307-0294] Length = 288 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 65/255 (25%), Positives = 116/255 (45%), Gaps = 23/255 (9%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S + IKK G ++ G+ + F + A G +GFDV+ + ++ + D +K++++ Sbjct: 43 SSIEQIKKNGVVRIGVFSDKPPFGYLDAQGKNQGFDVEIAKHIAKDLLGDENKVEFVLTE 102 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 A R L++ ++DI+ N T R+ + A +P G + K I+ V+QL Sbjct: 103 AANRVEYLKANKVDIIFANFTVTPERKEVVDFA-KPYLKV-ALGVVSPKSHPITDVAQLK 160 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIV----FERVEEIDAAYRAHRCDAYTGDISA 200 ++ V GTT AD F K HP + +E+ E A + R A D Sbjct: 161 DKTLLVNKGTT-----ADSF---FTKTHPEIKLQKYEQNTETFDALKDGRGTALAHD--N 210 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT--- 257 L L + P+ V + ++ + +APA+ +GD E ++ W + + + G+ Sbjct: 211 LLVLAWAKENPNYTVGITNLGEQDLIAPAVKKGDKE---LLDWLNQDLEKLAKEGVIHQA 267 Query: 258 -QKNINQVSKDTTNP 271 +K + V DT NP Sbjct: 268 YEKTLKPVYGDTINP 282 >gi|154149175|ref|YP_001406108.1| amino acid [Campylobacter hominis ATCC BAA-381] gi|153805184|gb|ABS52191.1| amino acid [Campylobacter hominis ATCC BAA-381] Length = 270 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 44/148 (29%), Positives = 76/148 (51%), Gaps = 3/148 (2%) Query: 12 LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI 71 L+ L F +A+ L +IK L+ G+ F+++K NG+++GF+VD + ++ I Sbjct: 5 LVFLMFMLGFLSANSLNEIKSSKILRVGVFEAQPPFSQIKENGEFEGFEVDLAKEIAKKI 64 Query: 72 FDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130 F S I++ P+ A +R LQ+ +ID L +T+ E S + F + G + Sbjct: 65 FGGNSGTIEFKPVLASDRLKVLQNNEIDFLI--ATFTITDERSKVIDFSNPYFAVNIGVV 122 Query: 131 MHKKKGISSVSQLSGASICVQAGTTTEL 158 K GI + + L G +I + GTT E+ Sbjct: 123 TRKDDGIKTFADLKGKTIIAEHGTTGEV 150 >gi|261839899|gb|ACX99664.1| hypothetical protein HPKB_1103 [Helicobacter pylori 52] Length = 244 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 13/228 (5%) Query: 10 LCLIILFFTSFSTNASILGD----IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 L LI L F++ S + D IK+RG LK G+ + F V + G ++G+DV + Sbjct: 24 LVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGQYQGYDVVIAK 83 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ + D +KI+++P+ A R L++ ++DI+ N T RE + A +P Y Sbjct: 84 RMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKVVDFA-KP--YMK 140 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 ++ K I ++ +L + V GTT + YF + + FE+ E A Sbjct: 141 VALGVVSKDGVIKNIEELKDKELIVNKGTTADF----YFTKNYPNIKLLKFEQNTETFLA 196 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + A D + L A P + + + K +APAI +G Sbjct: 197 LLNDKAIALAHDNTLLLA--WIKQHPEFKLGITSLGDKDVIAPAIKKG 242 >gi|165977129|ref|YP_001652722.1| putative ABC transporter, periplasmic binding protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|165877230|gb|ABY70278.1| putative ABC transporter, periplasmic binding protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 278 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 54/223 (24%), Positives = 105/223 (47%), Gaps = 10/223 (4%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 ST + IK++G ++ G+ F V ANG +GFDV+ + +++ + P K+++ Sbjct: 32 STAKDSVAQIKEKGVIRIGVFGDKPPFGYVDANGKSQGFDVEIAKEIANDLLGSPDKVEF 91 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD-GQGFIMHKKKGISS 139 + A R L+S ++D++ N T R + A Y + G + K IS Sbjct: 92 VLTEAANRVEYLKSNKVDLILANFTKTPERAEVVDFA---TPYMNVALGVVSPKGALISD 148 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + QL G ++ V GTT + YF ++ + + + F++ E A + R A D + Sbjct: 149 LKQLEGKTLLVNKGTTADA----YFTKNHPEINLLKFDQNTETFDALKDGRGVALAHDNA 204 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 ++A N P+ V + + +APA+ +G+ ++++ Sbjct: 205 LVWAWAKEN--PTFDVAIGSVGPAEQIAPAVQKGNQALLDVIN 245 >gi|153952077|ref|YP_001398009.1| bifunctional adhesin/ABC transporter aspartate/glutamate-binding protein [Campylobacter jejuni subsp. doylei 269.97] gi|152939523|gb|ABS44264.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Campylobacter jejuni subsp. doylei 269.97] Length = 259 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 8/204 (3%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDP 75 F++ + L IK +G L G+ + +A + +A G+ KGF+VD + L+ +I D Sbjct: 21 FSNANAAEGKLESIKSKGQLIVGVKNDVPHYALLDQATGEIKGFEVDVAKLLAKSILGDD 80 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 KI+ + +NAK R L + +D + +T+ E F Y D G ++ K+K Sbjct: 81 KKIKLVAVNAKTRGPLLDNGSVDAVIAT--FTITPERKRIYNFSEPYYQDAIGLLVLKEK 138 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 S++ + GA+I V TT+ + + K + F I AA A R +A++ Sbjct: 139 NYKSLADMKGANIGVAQAATTKKAIGEAAKKIGIDVKFSEFPDYPSIKAALDAKRVNAFS 198 Query: 196 GDISALYALKLTNDRPSEHVILPD 219 D S L L +D+ ILPD Sbjct: 199 VDKSIL--LGYVDDKSE---ILPD 217 >gi|327461008|gb|EGF07341.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK1057] Length = 270 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 44/173 (25%), Positives = 82/173 (47%), Gaps = 6/173 (3%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 I+KRG L G+ + F + + + + G ++D + ++ + KI Y+P+ A+ R Sbjct: 38 IQKRGVLNVGVKQDVPNFGYLNPDSNTYSGLEIDIAKKIAKEL---GVKINYVPVTAQTR 94 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 L + Q+D++ +T+ E F Y D GF+++K I+ V L+ +I Sbjct: 95 GPLLDNGQVDMVIAT--FTITDERKEIYNFTTPYYTDASGFLVNKSSKITDVKDLNNKTI 152 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 V G+ T+ L + + + + + E+ + RAHR DA + D S L Sbjct: 153 GVVQGSITQTLLEEIAQEKKLNFKYVELGSYPELAVSLRAHRIDAISVDKSIL 205 >gi|303249936|ref|ZP_07336138.1| putative ABC transporter, periplasmic binding protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|302650999|gb|EFL81153.1| putative ABC transporter, periplasmic binding protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 278 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 54/223 (24%), Positives = 105/223 (47%), Gaps = 10/223 (4%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 ST + IK++G ++ G+ F V ANG +GFDV+ + +++ + P K+++ Sbjct: 32 STAKDSVAQIKEKGVIRIGVFGDKPPFGYVDANGKNQGFDVEIAKEIANDLLGSPDKVEF 91 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD-GQGFIMHKKKGISS 139 + A R L+S ++D++ N T R + A Y + G + K IS Sbjct: 92 VLTEAANRVEYLKSNKVDLILANFTKTPERAEVVDFA---TPYMNVALGVVSPKGALISD 148 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + QL G ++ V GTT + YF ++ + + + F++ E A + R A D + Sbjct: 149 LKQLEGKTLLVNKGTTADA----YFTKNHPEINLLKFDQNTETFDALKDGRGVALAHDNA 204 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 ++A N P+ V + + +APA+ +G+ ++++ Sbjct: 205 LVWAWAKEN--PTFDVAIGSVGPAEQIAPAVQKGNQALLDVIN 245 >gi|190403010|gb|ACE78173.1| periplasmic amino acid-binding protein [Campylobacter jejuni] Length = 259 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 8/204 (3%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDP 75 F++ + L IK +G L G+ + +A + +A G+ KGF+VD + L+ +I D Sbjct: 21 FSNANAAEGKLESIKSKGQLIVGVKNDVPHYALLDQATGEIKGFEVDVAKLLAKSILGDD 80 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 KI+ + +NAK R L + +D + +T+ E F Y D G ++ K+K Sbjct: 81 KKIKLVAVNAKTRGPLLDNGSVDAVIAT--FTITPERKRIYNFSEPYYQDAIGLLVLKEK 138 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 S++ + GA+I V TT+ + + K + F I AA R DA++ Sbjct: 139 KYKSLADMKGANIGVAQAATTKKAIGEAAKKIGIDVKFSEFPDYPSIKAALDVKRVDAFS 198 Query: 196 GDISALYALKLTNDRPSEHVILPD 219 D S L L +D+ ILPD Sbjct: 199 VDKSIL--LGYVDDKSE---ILPD 217 >gi|148988975|ref|ZP_01820375.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP6-BS73] gi|168492770|ref|ZP_02716913.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae CDC3059-06] gi|147925472|gb|EDK76549.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP6-BS73] gi|183576870|gb|EDT97398.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae CDC3059-06] Length = 254 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 48/180 (26%), Positives = 85/180 (47%), Gaps = 7/180 (3%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 N SI DI+KRG L G+ + F + G + G + D + ++ + KI+Y+ Sbjct: 16 NTSI-ADIQKRGELVVGVKQDVPNFGYKDPKTGTYSGIETDLAKMVADEL---KVKIRYV 71 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 P+ A+ R L ++Q+D+ +T+ E F Y D GF+++K I + Sbjct: 72 PVTAQTRGPLLDNEQVDM--DIATFTITDERKKLYNFTSPYYTDASGFLVNKSAKIKKIE 129 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L+G +I V G+ T+ + + K + + + E+ + AHR DA++ D S L Sbjct: 130 DLNGKTIGVAQGSITQRLITELGKKKGLTFKFVELGSYPELITSLHAHRIDAFSVDRSIL 189 >gi|325121847|gb|ADY81370.1| putative ABC transporter, periplasmic binding protein, amino acid [Acinetobacter calcoaceticus PHEA-2] Length = 288 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 65/255 (25%), Positives = 116/255 (45%), Gaps = 23/255 (9%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S + IKK G ++ G+ + F + A G +GFDV+ + ++ + D +K++++ Sbjct: 43 SSIEQIKKNGVVRIGVFSDKPPFGYLDAQGKNQGFDVEIAKHVAKDLLGDENKVEFVLTE 102 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 A R L++ ++DI+ N T R+ + A +P G + K I+ V+QL Sbjct: 103 AANRVEYLKANKVDIIFANFTVTSERKEVVDFA-KPYLKV-ALGVVSPKSHPITDVAQLK 160 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIV----FERVEEIDAAYRAHRCDAYTGDISA 200 ++ V GTT AD F K HP + +E+ E A + R A D Sbjct: 161 DKTLLVNKGTT-----ADSF---FTKTHPEIKLQKYEQNTETFDALKDGRGAALAHD--N 210 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT--- 257 L L + P+ V + ++ + +APA+ +GD E ++ W + + + G+ Sbjct: 211 LLVLAWAKENPNYTVGITNLGEQDLIAPAVKKGDKE---LLDWLNPELEKLAKEGVIHQA 267 Query: 258 -QKNINQVSKDTTNP 271 +K + V DT NP Sbjct: 268 YEKTLKPVYGDTINP 282 >gi|323517654|gb|ADX92035.1| amino acid ABC transporter periplasmic protein [Acinetobacter baumannii TCDC-AB0715] Length = 280 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 65/259 (25%), Positives = 117/259 (45%), Gaps = 23/259 (8%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + S + IKK G ++ G+ + F + A G +GFDV+ + ++ + D +K+++ Sbjct: 31 TQTVSSIEQIKKNGVVRIGVFSDKPPFGYLDAQGKNQGFDVEIAKHVAKDLLGDENKVEF 90 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + A R L++ ++DI+ N T R+ + A +P G + K I+ V Sbjct: 91 VLTEAANRVEYLKANKVDIIFANFTVTPERKEVVDFA-KPYLKV-ALGVVSPKSHPITDV 148 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV----FERVEEIDAAYRAHRCDAYTG 196 +QL ++ V GTT AD F K HP + +E+ E A + R A Sbjct: 149 AQLKDKTLLVNKGTT-----ADSF---FTKTHPEIKLQKYEQNTETFDALKDGRGAALAH 200 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 D L L + P+ V + ++ + +APA+ +GD E ++ W + + + G+ Sbjct: 201 D--NLLVLAWAKENPNYTVGITNLGEQDLIAPAVKKGDKE---LLDWLNQDLEKLAKEGV 255 Query: 257 T----QKNINQVSKDTTNP 271 +K + V DT NP Sbjct: 256 IHQAYEKTLKPVYGDTINP 274 >gi|323351209|ref|ZP_08086865.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis VMC66] gi|322122433|gb|EFX94144.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis VMC66] Length = 270 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 44/173 (25%), Positives = 82/173 (47%), Gaps = 6/173 (3%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 I+KRG L G+ + F + + + + G ++D + ++ + KI Y+P+ A+ R Sbjct: 38 IQKRGVLNVGVKQDVPNFGYLNPDSNTYSGLEIDIAKKIAKEL---GVKINYVPVTAQTR 94 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 L + Q+D++ +T+ E F Y D GF+++K I+ V L+ +I Sbjct: 95 GPLLDNGQVDMVIAT--FTITDERKEIYNFTTPYYTDASGFLVNKSSKITDVKDLNNKTI 152 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 V G+ T+ L + + + + + E+ + RAHR DA + D S L Sbjct: 153 GVVQGSITQTLLEEIAQEKKLNFKYVELGSYPELAVSLRAHRIDAISVDKSIL 205 >gi|268319381|ref|YP_003293037.1| ABC transporter solute-binding component [Lactobacillus johnsonii FI9785] gi|262397756|emb|CAX66770.1| ABC transporter solute-binding component [Lactobacillus johnsonii FI9785] Length = 284 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 65/238 (27%), Positives = 106/238 (44%), Gaps = 27/238 (11%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 IKKRG +K + L + V +G G+DV R L+ + K++++ +NA R Sbjct: 46 IKKRGTIKVAVFGDLPPYGWVNKDGKRVGYDVRLARELAKEM---GVKVKFVQVNANNRV 102 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 L + + DI+ N T R+ + A +P G + K K I++V+QL G + Sbjct: 103 DTLNANKADIVLANFTVTSERKQVVDFA-KPYMKV-SVGVVSPKSKPITNVNQLKGKKVI 160 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V GTT E +YF + + F+ + A + R A D S LYA N Sbjct: 161 VTKGTTAE----NYFTSKQPDVDLLKFDSKTQQFNAMKNGRAAALADDNSYLYAWVKNN- 215 Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 P V + + S +APA+ +G+ ++ WT+ K IN+++KD Sbjct: 216 -PKYTVGIKHLGPNSYIAPAVKKGNKS---LLDWTN-------------KRINKLNKD 256 >gi|239503575|ref|ZP_04662885.1| amino acid ABC transporter periplasmic protein [Acinetobacter baumannii AB900] gi|260555371|ref|ZP_05827592.1| amino acid ABC transporter periplasmic protein [Acinetobacter baumannii ATCC 19606] gi|260411913|gb|EEX05210.1| amino acid ABC transporter periplasmic protein [Acinetobacter baumannii ATCC 19606] Length = 288 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 65/255 (25%), Positives = 116/255 (45%), Gaps = 23/255 (9%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S + IKK G ++ G+ + F + A G +GFDV+ + ++ + D +K++++ Sbjct: 43 SSIEQIKKNGVVRIGVFSDKPPFGYLDAQGKNQGFDVEIAKHVAKDLLGDENKVEFVLTE 102 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 A R L++ ++DI+ N T R+ + A +P G + K I+ V+QL Sbjct: 103 AANRVEYLKANKVDIIFANFTVTPERKEVVDFA-KPYLKV-ALGVVSPKSHPITDVAQLK 160 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIV----FERVEEIDAAYRAHRCDAYTGDISA 200 ++ V GTT AD F K HP + +E+ E A + R A D Sbjct: 161 DKTLLVNKGTT-----ADSF---FTKTHPEIKLQKYEQNTETFDALKDGRGAALAHD--N 210 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT--- 257 L L + P+ V + ++ + +APA+ +GD E ++ W + + + G+ Sbjct: 211 LLVLAWAKENPNYTVGITNLGEQDLIAPAVKKGDKE---LLDWLNQDLEKLAKEGVIHQA 267 Query: 258 -QKNINQVSKDTTNP 271 +K + V DT NP Sbjct: 268 YEKTLKPVYGDTINP 282 >gi|184157762|ref|YP_001846101.1| amino acid ABC transporter periplasmic protein [Acinetobacter baumannii ACICU] gi|260550585|ref|ZP_05824794.1| amino acid ABC transporter periplasmic protein [Acinetobacter sp. RUH2624] gi|294842168|ref|ZP_06786851.1| amino acid ABC transporter periplasmic protein [Acinetobacter sp. 6014059] gi|299770570|ref|YP_003732596.1| amino acid ABC transporter periplasmic protein [Acinetobacter sp. DR1] gi|183209356|gb|ACC56754.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Acinetobacter baumannii ACICU] gi|260406296|gb|EEW99779.1| amino acid ABC transporter periplasmic protein [Acinetobacter sp. RUH2624] gi|298700658|gb|ADI91223.1| amino acid ABC transporter periplasmic protein [Acinetobacter sp. DR1] gi|322508072|gb|ADX03526.1| Putative amino acid transport protein [Acinetobacter baumannii 1656-2] Length = 288 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 65/255 (25%), Positives = 116/255 (45%), Gaps = 23/255 (9%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S + IKK G ++ G+ + F + A G +GFDV+ + ++ + D +K++++ Sbjct: 43 SSIEQIKKNGVVRIGVFSDKPPFGYLDAQGKNQGFDVEIAKHVAKDLLGDENKVEFVLTE 102 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 A R L++ ++DI+ N T R+ + A +P G + K I+ V+QL Sbjct: 103 AANRVEYLKANKVDIIFANFTVTPERKEVVDFA-KPYLKV-ALGVVSPKSHPITDVAQLK 160 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIV----FERVEEIDAAYRAHRCDAYTGDISA 200 ++ V GTT AD F K HP + +E+ E A + R A D Sbjct: 161 DKTLLVNKGTT-----ADSF---FTKTHPEIKLQKYEQNTETFDALKDGRGAALAHD--N 210 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT--- 257 L L + P+ V + ++ + +APA+ +GD E ++ W + + + G+ Sbjct: 211 LLVLAWAKENPNYTVGITNLGEQDLIAPAVKKGDKE---LLDWLNQDLEKLAKEGVIHQA 267 Query: 258 -QKNINQVSKDTTNP 271 +K + V DT NP Sbjct: 268 YEKTLKPVYGDTINP 282 >gi|324991490|gb|EGC23423.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK353] Length = 270 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 44/173 (25%), Positives = 82/173 (47%), Gaps = 6/173 (3%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 I+KRG L G+ + F + + + + G ++D + ++ + KI Y+P+ A+ R Sbjct: 38 IQKRGVLNVGVKQDVPNFGYLNPDSNTYSGLEIDIAKKIAKEL---GVKINYVPVTAQTR 94 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 L + Q+D++ +T+ E F Y D GF+++K I+ V L+ +I Sbjct: 95 GPLLDNGQVDMVIAT--FTITDERKEIYNFTTPYYTDASGFLVNKSSKITDVKDLNNKTI 152 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 V G+ T+ L + + + + + E+ + RAHR DA + D S L Sbjct: 153 GVVQGSITQTLLEEIAQEKKLNFKYVELGSYPELAVSLRAHRIDAISVDKSIL 205 >gi|320546920|ref|ZP_08041222.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus equinus ATCC 9812] gi|320448438|gb|EFW89179.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus equinus ATCC 9812] Length = 290 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 66/256 (25%), Positives = 111/256 (43%), Gaps = 35/256 (13%) Query: 6 FVSILCLIILFFTS-----------------FSTNASILGDIKKRGFLKCGINTGLVGFA 48 F++I+ L+++ F + + A L IKK G +K G+ + F Sbjct: 7 FLAIISLLLIVFAAGCSTSKSSTTKNSSSATSTAKARSLDAIKKSGTIKIGVFSDKKPFG 66 Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 V G ++G+DV F L+ D K++Y+ ++ R L S ++DI+ N T Sbjct: 67 YVDDKGKYQGYDVYFANRLAK---DLGVKVKYVSVDPASRVEYLTSAKVDIILANFTVTD 123 Query: 109 LR--EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 R ++ L + + G + + IS V L G ++ V GTT E YF+ Sbjct: 124 ERAKQVDFALPYMKVAL----GVVSPSNQLISDVDALEGKTLIVGKGTTAET----YFEK 175 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 H K + + F++ E A R DA + D + + A L N V + + + Sbjct: 176 HYPKVNLLKFDQYSEAYQALLDGRGDALSTDNTEVLAWALEN--KGYEVGIISLGDTDTI 233 Query: 227 APAIIQGDTE---WYN 239 APA+ +G+TE W N Sbjct: 234 APAVQKGNTELLDWIN 249 >gi|320334508|ref|YP_004171219.1| ABC transporter periplasmic subunit [Deinococcus maricopensis DSM 21211] gi|319755797|gb|ADV67554.1| ABC-type transporter, periplasmic subunit family 3 [Deinococcus maricopensis DSM 21211] Length = 278 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 58/219 (26%), Positives = 95/219 (43%), Gaps = 11/219 (5%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS---SAIFDDPSKIQYLPLNAKERFL 90 G G+ F V +GD GFDVD + ++ SA K++ + +K R Sbjct: 28 GKFTAGVKYDSPPFGFVNEDGDVGGFDVDLVKEIAKDLSAACKKTVKLELKQVTSKNRIE 87 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYF-DGQGFIMHKKKGISSVSQLSGASIC 149 +Q+ +D+ + T R + + TYF DGQ ++ I SV L+G + Sbjct: 88 FVQNGTVDLAAATATATYGRMDVVDFS---NTYFIDGQRLLVPANSAIKSVKDLAGKRVG 144 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 G+T+E L KA K + F++ + A + R DA + D + L LK + Sbjct: 145 TAQGSTSEANL----KAAAPKASVVSFQQYTDAFTALQQGRVDAVSTDSTILLGLKASAP 200 Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 PS+ I+ S P + Q D++W N V+ + M Sbjct: 201 DPSKFKIVGAYFSNEPYGIILKQNDSKWRNFVNESLTRM 239 >gi|154483455|ref|ZP_02025903.1| hypothetical protein EUBVEN_01158 [Eubacterium ventriosum ATCC 27560] gi|149735707|gb|EDM51593.1| hypothetical protein EUBVEN_01158 [Eubacterium ventriosum ATCC 27560] Length = 295 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 62/227 (27%), Positives = 102/227 (44%), Gaps = 20/227 (8%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 S + A + +IKK G +K G+ + F V NG +G+DV F + ++ + + Sbjct: 39 SATAKARTIDEIKKSGKIKIGVFSDKNPFGYVDENGKVQGYDVYFAKRIAKDLLGSEDAV 98 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKKG 136 ++ + A R L+S ++DI N T R ++ L + + G + +K Sbjct: 99 DFVYVEAASRVEYLKSAKVDITLANFTVTDERKEQVDFALPYMKVAL----GIVSPQKAE 154 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA---HRCDA 193 I+ V+QL G + V GTT E YF + Y + + +E AY A R DA Sbjct: 155 ITDVNQLKGKKLIVVKGTTAET----YFSKN---YPDVTLVKFDEYQEAYDALLDGRGDA 207 Query: 194 YTGDISALYALKLTNDRPSEHV-ILPDIISKSPLAPAIIQGDTEWYN 239 ++ D + + A N V L DI +APA+ +G+TE N Sbjct: 208 FSTDNTEVLAWAKQNKGFVVGVESLGDI---DTIAPAVQKGNTELLN 251 >gi|257784253|ref|YP_003179470.1| extracellular solute-binding protein family 3 [Atopobium parvulum DSM 20469] gi|257472760|gb|ACV50879.1| extracellular solute-binding protein family 3 [Atopobium parvulum DSM 20469] Length = 298 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 15/218 (6%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L DIKK G + G+ + F V ANG++ G+D+ F L+ D KI Y+ + + Sbjct: 53 LDDIKKAGTVNIGVFSDKAPFGYVDANGNYAGYDIVFAERLAK---DMGVKINYIATDGQ 109 Query: 87 ERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 R LQS + DI+ N T R ++ L + I G + I+ VSQL Sbjct: 110 NRVPFLQSNKADIMLANFTVTDDRKEKVDFSLPYMKIKL----GVVSPASAPITDVSQLD 165 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G + V GTT E+ +F + K + F+ + A R DA++ D + + A Sbjct: 166 GKKLIVSKGTTAEV----WFAKNAPKVELVKFDSYADAYNALLDGRGDAFSTDNTEVLAW 221 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 +N P V + D+ +A A+ +G++ ++ Sbjct: 222 VKSN--PGFIVGIDDLGDSDTIAAAVHKGNSSLLEFIN 257 >gi|120401719|ref|YP_951548.1| extracellular solute-binding protein [Mycobacterium vanbaalenii PYR-1] gi|119954537|gb|ABM11542.1| amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium vanbaalenii PYR-1] Length = 332 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 55/199 (27%), Positives = 90/199 (45%), Gaps = 17/199 (8%) Query: 27 LGDIKKRGFLKCGINTG--LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 + +IK RG L G++ G L F + G+ GFDVD ++ IF PS+++Y L+ Sbjct: 89 VANIKARGRLIVGLDIGSNLFSFRD-PITGEITGFDVDIAGEIARDIFGTPSQVEYRILS 147 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG-QGFIMHKKKGISSVSQL 143 + +R ALQ Q+D++ + T R+ + + Y Q + + I S L Sbjct: 148 SADRVEALQKNQVDVVVKTMTITCERKKLVNFS---TAYLSANQRILAPRDSNIRQSSDL 204 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA--AYRAHRCDAYTGDISAL 201 SG +CV GTT+ + + PI+ V D A + + DA + D S L Sbjct: 205 SGKRVCVAKGTTS------LERIQQITPPPIIVGVVTWADCLVALQQRQVDAVSTDDSIL 258 Query: 202 YALKLTNDRPSEHVILPDI 220 L + P H++ P + Sbjct: 259 AG--LVSQDPYLHIVGPSM 275 >gi|325690800|gb|EGD32801.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK115] gi|325696131|gb|EGD38022.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK160] Length = 270 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 44/173 (25%), Positives = 82/173 (47%), Gaps = 6/173 (3%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 I+KRG L G+ + F + + + + G ++D + ++ + KI Y+P+ A+ R Sbjct: 38 IQKRGVLNVGVKQDVPNFGYLNPDSNTYSGLEIDIAKKIAKEL---GVKINYVPVTAQTR 94 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 L + Q+D++ +T+ E F Y D GF+++K I+ V L+ +I Sbjct: 95 GPLLDNGQVDMVIAT--FTITDERKEIYNFTTPYYTDASGFLVNKSSKITDVKDLNNKTI 152 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 V G+ T+ L + + + + + E+ + RAHR DA + D S L Sbjct: 153 GVVQGSITQTLLEEIAQEKKLNFKYVELGSYPELAVSLRAHRIDAISVDKSIL 205 >gi|169834023|ref|YP_001694088.1| glutamine ABC transporter substrate-binding protein [Streptococcus pneumoniae Hungary19A-6] gi|168996525|gb|ACA37137.1| ABC transporter substrate-binding protein - glutamine transport/Major cell binding factor [Streptococcus pneumoniae Hungary19A-6] Length = 264 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 64/228 (28%), Positives = 109/228 (47%), Gaps = 17/228 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFA-EVKANGDW 56 M K FF+S L LI LF + + + + DI+KRG L G+ + F + G + Sbjct: 1 MKKKFFLSAL-LISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTY 59 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G + D + ++ KI+Y+P+ A+ R L ++Q+D+ +T+ E Sbjct: 60 SGIETDLAKMVADEF---KVKIRYVPVTAQTRGPLLDNEQVDM--DIATFTITDERKKLY 114 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F Y D GF+++K I + L+G +I V G+ T+ + + K +K+ + Sbjct: 115 NFTSPYYTDASGFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVEL 174 Query: 177 ERVEEIDAAYRAHRCDAYTGDISAL--YALK---LTND--RPSEHVIL 217 E+ + AHR DA++ D S L Y K L ND +PS++ I+ Sbjct: 175 GSYPELITSLHAHRIDAFSVDHSILSGYTSKRTALLNDSFKPSDYGIV 222 >gi|148998282|ref|ZP_01825751.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP11-BS70] gi|168576492|ref|ZP_02722366.1| ABC transporter substrate-binding protein - glutamine transport/Major cell binding factor [Streptococcus pneumoniae MLV-016] gi|307067225|ref|YP_003876191.1| amino acid ABC transporter/signal transduction system periplasmic domain-containing protein [Streptococcus pneumoniae AP200] gi|147755925|gb|EDK62969.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP11-BS70] gi|183577688|gb|EDT98216.1| ABC transporter substrate-binding protein - glutamine transport/Major cell binding factor [Streptococcus pneumoniae MLV-016] gi|306408762|gb|ADM84189.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain protein [Streptococcus pneumoniae AP200] Length = 264 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 56/205 (27%), Positives = 98/205 (47%), Gaps = 10/205 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFA-EVKANGDW 56 M K FF+S L LI LF + + + + DI+KRG L G+ + F + G + Sbjct: 1 MKKKFFLSAL-LISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTY 59 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G + D + ++ + KI+Y+P+ A+ R L ++Q+D+ +T+ E Sbjct: 60 SGIETDLAKMVADEL---KVKIRYVPVTAQTRGPLLDNEQVDM--DIATFTITDERKKLY 114 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F Y D GF+++K I + L+G +I V G+ T+ + + K +K+ + Sbjct: 115 NFTSPYYTDASGFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVEL 174 Query: 177 ERVEEIDAAYRAHRCDAYTGDISAL 201 E+ + AHR DA++ D S L Sbjct: 175 GSYPELITSLHAHRIDAFSVDRSIL 199 >gi|78357806|ref|YP_389255.1| extracellular solute-binding protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78220211|gb|ABB39560.1| amino acid ABC transporter substrate-binding protein, PAAT family [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 275 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 59/240 (24%), Positives = 108/240 (45%), Gaps = 13/240 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V++ + +F S + + I + ++ GI T + A G+W GFD D Sbjct: 7 VALAVAMTMFVASAAFAGPVYDKIMQTKKVRVGIMTDSIPGAFYNEKGEWVGFDYDIATE 66 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF-D 125 ++ + +I + +N + R LQ +IDI N T R+ S+ + ITYF D Sbjct: 67 VAKRM---GVEIDRVAVNNQTRISFLQQGRIDISVANMTHTRERDKSIDFS---ITYFFD 120 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH---NMKYHPIVFERVEEI 182 GQ ++ KK +S++ + G I GTT+EL L KA + + I +++ + Sbjct: 121 GQK-VLAKKGQFTSLNDMVGKKIATMQGTTSELNLKAALKAAGDPDYDKNVISYQKESQC 179 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A ++ R ++ D + L L + P + ++ D +S P + Q D+ + V+ Sbjct: 180 FQALQSGRVAGWSTDATIL--LGYASKTPGAYELVGDFLSDEPYGMGLPQDDSALRDAVN 237 >gi|225858444|ref|YP_002739954.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae 70585] gi|225720039|gb|ACO15893.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae 70585] Length = 254 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 45/176 (25%), Positives = 83/176 (47%), Gaps = 6/176 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 + DI+KRG L G+ + F + G + G + D + ++ + KI+Y+P+ A Sbjct: 19 IADIQKRGELVVGVKQDVPNFGYKDPKTGTYSGIETDLAKMVADEL---KVKIRYVPVTA 75 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 + R L ++Q+D+ +T+ E F Y D GF+++K I + L+G Sbjct: 76 QTRGPLLDNEQVDM--DIATFTITDERKKLYNFTSPYYTDASGFLVNKSAKIKKIEDLNG 133 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 +I V G+ T+ + + K + + + E+ + AHR DA++ D S L Sbjct: 134 KTIGVAQGSITQRLITELGKKKGLTFKFVELGSYPELITSLHAHRIDAFSVDRSIL 189 >gi|172065224|ref|YP_001815936.1| extracellular solute-binding protein [Burkholderia ambifaria MC40-6] gi|171997466|gb|ACB68383.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MC40-6] Length = 313 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 56/232 (24%), Positives = 99/232 (42%), Gaps = 6/232 (2%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK---IQYLPL 83 L ++ G + G + F+ + A G+ ++ C+AL S+I D +K I+++P+ Sbjct: 46 LAKVRSSGTIALGYRDASIPFSYLNARNQPIGYSIELCKALVSSIEDAVNKSLTIRWVPV 105 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 + R A+ S +D+ +T L R+ + AF PI + G ++ + I S L Sbjct: 106 TSDNRIDAVVSGNVDLECGSTTSNLERQQRV--AFSPIIFVAGTKVMVKRGSPIRSFRDL 163 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 +G + V AGTT E L D + V + A R DA+ D LY Sbjct: 164 AGKKVAVTAGTTNEKALRDLDARFKLGIQLQVVPDHAQGFALVANGRADAFATDDVLLYG 223 Query: 204 LKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 L N + ++ ++ D +S P + D + +V T + E+ Sbjct: 224 LIAENAGKGGQYDVVGDYLSYDPYGIMFRKDDPQLAQVVKSTFEELAVDGEI 275 >gi|194397781|ref|YP_002037268.1| ABC transporter substrate-binding protein [Streptococcus pneumoniae G54] gi|194357448|gb|ACF55896.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae G54] Length = 264 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 56/205 (27%), Positives = 98/205 (47%), Gaps = 10/205 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFA-EVKANGDW 56 M K FF+S L LI LF + + + + DI+KRG L G+ + F + G + Sbjct: 1 MKKKFFLSAL-LISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTY 59 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G + D + ++ + KI+Y+P+ A+ R L ++Q+D+ +T+ E Sbjct: 60 SGIETDLAKMVADEL---KVKIRYVPVTAQTRGPLLDNEQVDM--DIATFTITDERKKLY 114 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F Y D GF+++K I + L+G +I V G+ T+ + + K +K+ + Sbjct: 115 NFTSPYYTDASGFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVEL 174 Query: 177 ERVEEIDAAYRAHRCDAYTGDISAL 201 E+ + AHR DA++ D S L Sbjct: 175 GSYPELITSLHAHRIDAFSVDRSIL 199 >gi|229541938|ref|ZP_04430998.1| extracellular solute-binding protein family 3 [Bacillus coagulans 36D1] gi|229326358|gb|EEN92033.1| extracellular solute-binding protein family 3 [Bacillus coagulans 36D1] Length = 271 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 59/217 (27%), Positives = 103/217 (47%), Gaps = 15/217 (6%) Query: 30 IKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 I+ RG L G+ +T L G+ + K G+ +GFDVD +A+S IF D K++ + +K Sbjct: 44 IEDRGKLVVGVKYDTYLFGYKDPK-TGNVEGFDVDIAKAISKKIFGDKVKVELKEVTSKT 102 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD-GQGFIMHKKKGISSVSQLS-G 145 R LQ+ +D++ T+ + + F + YFD GQ ++ K I SV L+ G Sbjct: 103 RIPMLQNGDVDMVVAT--MTISPDRKKVVDFSDV-YFDAGQSLLVKKGSKIKSVKDLTKG 159 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 + G T+ D + + +E +E A ++ + DA T D S LY + Sbjct: 160 TKVLTVKGATS----GDNVRKAAPDTTVLEYENYQEAFTALKSGKGDALTTDNSILYGMA 215 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + S + ++ +K P A+ +G+T+ V+ Sbjct: 216 AQD---SNYQVVGGTFTKEPYGIAMKKGNTKLVKAVN 249 >gi|149005718|ref|ZP_01829457.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP18-BS74] gi|225856308|ref|YP_002737819.1| ABC transporter substrate-binding protein - glutamine transport/Major cell binding factor [Streptococcus pneumoniae P1031] gi|303260101|ref|ZP_07346074.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP-BS293] gi|303261285|ref|ZP_07347233.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP14-BS292] gi|303263950|ref|ZP_07349871.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae BS397] gi|303265941|ref|ZP_07351837.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae BS457] gi|303268323|ref|ZP_07354120.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae BS458] gi|147762658|gb|EDK69618.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP18-BS74] gi|225724646|gb|ACO20498.1| ABC transporter substrate-binding protein - glutamine transport/Major cell binding factor [Streptococcus pneumoniae P1031] gi|302637419|gb|EFL67906.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP14-BS292] gi|302638796|gb|EFL69258.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP-BS293] gi|302642161|gb|EFL72511.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae BS458] gi|302644525|gb|EFL74776.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae BS457] gi|302646355|gb|EFL76581.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae BS397] Length = 264 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 56/205 (27%), Positives = 98/205 (47%), Gaps = 10/205 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFA-EVKANGDW 56 M K FF+S L LI LF + + + + DI+KRG L G+ + F + G + Sbjct: 1 MKKKFFLSAL-LISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTY 59 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G + D + ++ + KI+Y+P+ A+ R L ++Q+D+ +T+ E Sbjct: 60 SGIETDLAKMVADEL---KVKIRYVPVTAQTRGPLLDNEQVDM--DIATFTITDERKKLY 114 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F Y D GF+++K I + L+G +I V G+ T+ + + K +K+ + Sbjct: 115 NFTSPYYTDASGFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVEL 174 Query: 177 ERVEEIDAAYRAHRCDAYTGDISAL 201 E+ + AHR DA++ D S L Sbjct: 175 GSYPELITSLHAHRIDAFSVDHSIL 199 >gi|218249147|ref|YP_002374518.1| family 3 extracellular solute-binding protein [Cyanothece sp. PCC 8801] gi|218169625|gb|ACK68362.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 8801] Length = 299 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 60/250 (24%), Positives = 109/250 (43%), Gaps = 13/250 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + IL L++ S+ A +L IK+ G + G + F + G W G+ Sbjct: 1 MGKKVTLFILTLVLATTGQASSWAGQVLEKIKQTGVINAGTRKDAIPFGYINEQGKWVGY 60 Query: 60 DVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +D + + P K+ + + ++RF ++ IDI +T +T R ++ Sbjct: 61 SLDVLEIIRKDVEKQLGKPIKLNLVEVTTQDRFNKIKDGSIDIECASTTFTWERNKTVDF 120 Query: 117 AFRPITYF-DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 ++YF G ++ K +GI SV L+G + V TT E + A + +V Sbjct: 121 T---VSYFASGTKVLVKKDRGIGSVETLAGLKVGVIPKTTNEQAIKIQHPAAQLV---MV 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI-ISKSPLAPAIIQGD 234 +R E + A DA+ D L LK + P+ ++P+ + A I Q Sbjct: 175 KDRKEGLQ-KLEAGTIDAFASDGILLEGLKKESSNPNNLEVVPEFPYAYESYACMIPQDQ 233 Query: 235 TEWYNIVSWT 244 ++W N+V+++ Sbjct: 234 SQWRNMVNYS 243 >gi|46202161|ref|ZP_00208410.1| COG0834: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Magnetospirillum magnetotacticum MS-1] Length = 542 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 56/252 (22%), Positives = 116/252 (46%), Gaps = 9/252 (3%) Query: 10 LCLIILFFTSFSTNASILGDIKK---RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 + +++F + + + G +KK G L GI + + G+ +D C Sbjct: 1 MAALVVFASLPALAEDLAGTLKKVGDSGTLTLGIRESSYPLSYLDDGQKPIGYHIDICTR 60 Query: 67 LSSAI---FDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 L+ A+ P+ K++ LP+ ++ R +Q+ +D+ +T R + +AF P T Sbjct: 61 LAEAVKTRLALPALKVETLPVTSQNRIPLVQNGTVDLECGSTTNNEAR--ARQVAFAPTT 118 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 + + K GI+S++QL+G + + GTT+ + + K N+ + I + + Sbjct: 119 FVTKVRMAVKKSSGITSIAQLAGKPVAITTGTTSVQLVRAHKKGQNVAFKEIYGKDHADS 178 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 R A+ D + L L T+ P ++ I+ +++S P+A + + D ++ +V Sbjct: 179 FLLLETDRAVAFVMDDNLLAGLIATSKAPGDYAIVGEVLSVEPIAIMLRRDDPQFKALVD 238 Query: 243 WTHYAMVTAEEL 254 T AM+ + E+ Sbjct: 239 DTVKAMMASGEV 250 >gi|257461201|ref|ZP_05626299.1| acriflavine resistance protein [Campylobacter gracilis RM3268] gi|257441575|gb|EEV16720.1| acriflavine resistance protein [Campylobacter gracilis RM3268] Length = 286 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 56/212 (26%), Positives = 97/212 (45%), Gaps = 9/212 (4%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S + IKKRG ++ + F + G G+DV F + ++ + D SK+Q++ + Sbjct: 38 SYIDGIKKRGVVRIAVFGDKPPFGYIDETGKNAGYDVYFAKRIAKELLGDESKVQFVLVE 97 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 A R L S ++DI N T R+ + A + Y + K I+ VSQL Sbjct: 98 AANRAEFLASDKVDITLANFTVTPERKEVVDFA---LPYMKVALGVASKDGDITDVSQLK 154 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 ++ + GTT +L YF ++ + + F++ E A R DA D + L+A Sbjct: 155 DKTLLINKGTTADL----YFTKNHPEIKLLKFDQNTETFGAMLDGRGDAIAHDNTLLFAW 210 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 +N P V + + + +APA+ +G+ E Sbjct: 211 TKSN--PGFKVGIRSLGDQDVIAPAVKKGNDE 240 >gi|16329306|ref|NP_440034.1| hypothetical protein sll0224 [Synechocystis sp. PCC 6803] gi|1651787|dbj|BAA16714.1| sll0224 [Synechocystis sp. PCC 6803] Length = 298 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 56/226 (24%), Positives = 101/226 (44%), Gaps = 16/226 (7%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD---FCRALSSAIFDDPSKIQYLP 82 +L I++ G + G V FA V G+W GF +D R + A P K+ + Sbjct: 26 VLDRIEQTGVINAGTRKDAVPFAYVDDQGEWVGFSIDLLELIRQEAEARLGKPIKLNMVE 85 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF-DGQGFIMHKKKGISSVS 141 A RF + ++ ID+ ++ +T R + + ++YF DG I + S Sbjct: 86 ATADNRFDLITNQTIDLECASSTFTWNRTAVVDFS---VSYFADGTKIITGVDSDLESAD 142 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID--AAYRAHRCDAYTGDIS 199 L+G +I V TT + D+ + + E ++ D A A +A+ GD Sbjct: 143 SLAGRAIGVIPDTTNAKAILDF------QPGATIVEVKDQADGMAKLEAGEIEAFAGDGI 196 Query: 200 ALYALKLTNDRPSEHVILPDIISK-SPLAPAIIQGDTEWYNIVSWT 244 L LK T+D P + ++P+ + A + + D++W N+V+++ Sbjct: 197 VLAGLKKTSDNPQQWKVVPNFPYQYEAYACLLPKDDSDWRNLVNYS 242 >gi|225860607|ref|YP_002742116.1| ABC transporter substrate-binding protein - glutamine transport/Major cell binding factor [Streptococcus pneumoniae Taiwan19F-14] gi|225727230|gb|ACO23081.1| ABC transporter substrate-binding protein - glutamine transport/Major cell binding factor [Streptococcus pneumoniae Taiwan19F-14] Length = 264 Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 56/205 (27%), Positives = 98/205 (47%), Gaps = 10/205 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFA-EVKANGDW 56 M K FF+S L LI LF + + + + DI+KRG L G+ + F + G + Sbjct: 1 MKKKFFLSAL-LISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTY 59 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G + D + ++ + KI+Y+P+ A+ R L ++Q+D+ +T+ E Sbjct: 60 SGIETDLAKMVADEL---KVKIRYVPVTAQTRGPLLDNEQVDM--DIATFTITDERKKLY 114 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F Y D GF+++K I + L+G +I V G+ T+ + + K +K+ + Sbjct: 115 NFTSPYYTDASGFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVEL 174 Query: 177 ERVEEIDAAYRAHRCDAYTGDISAL 201 E+ + AHR DA++ D S L Sbjct: 175 GSYPELITSLHAHRIDAFSVDRSIL 199 >gi|328946749|gb|EGG40887.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK1087] Length = 270 Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 44/173 (25%), Positives = 81/173 (46%), Gaps = 6/173 (3%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 I+KRG L G+ + F + + + + G ++D + ++ + KI Y+P+ A+ R Sbjct: 38 IQKRGVLNVGVKQDVPNFGYLNPDSNTYSGLEIDIAKKIAKEL---GVKINYVPVTAQTR 94 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 L + Q+D++ +T+ E F Y D GF+++K I V L+ +I Sbjct: 95 GPLLDNGQVDMVIAT--FTITDERKEIYNFTTPYYTDASGFLVNKSSKIKDVKDLNNKTI 152 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 V G+ T+ L + + + + + E+ + RAHR DA + D S L Sbjct: 153 GVVQGSITQTLLEEIAQEKKLNFKYVELGSYPELAVSLRAHRIDAISVDKSIL 205 >gi|171778294|ref|ZP_02919500.1| hypothetical protein STRINF_00342 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171282994|gb|EDT48418.1| hypothetical protein STRINF_00342 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 290 Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 65/256 (25%), Positives = 111/256 (43%), Gaps = 35/256 (13%) Query: 6 FVSILCLIILFFTS-----------------FSTNASILGDIKKRGFLKCGINTGLVGFA 48 F++I+ L+++ F + + A L IKK G +K G+ + F Sbjct: 7 FLAIVSLLLIVFAAGCSTSKSSTTKNSSSATSTAKARSLDAIKKSGTIKIGVFSDKKPFG 66 Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 V G ++G+D+ F L+ D K++Y+ ++ R L S ++DI+ N T Sbjct: 67 YVDDKGKYQGYDIYFANRLAK---DLGVKVKYVSVDPASRVEYLTSAKVDIILANFTVTD 123 Query: 109 LR--EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 R ++ L + + G + + IS V L G ++ V GTT E YF+ Sbjct: 124 ERAKQVDFALPYMKVAL----GVVSPSNQLISDVDALEGKTLIVGKGTTAET----YFEK 175 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 H K + + F++ E A R DA + D + + A L N V + + + Sbjct: 176 HYPKVNLLKFDQYSEAYQALLDGRGDALSTDNTEVLAWALEN--KGYKVGITSLGDTDTI 233 Query: 227 APAIIQGDTE---WYN 239 APA+ +G+TE W N Sbjct: 234 APAVQKGNTELLDWIN 249 >gi|301801478|emb|CBW34170.1| putative glutamine-binding protein precursor [Streptococcus pneumoniae INV200] Length = 254 Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 45/176 (25%), Positives = 83/176 (47%), Gaps = 6/176 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 + DI+KRG L G+ + F + G + G + D + ++ + KI+Y+P+ A Sbjct: 19 IADIQKRGELVVGVKQDVPNFGYKDPKTGTYSGIETDLAKIVADEL---KVKIRYVPVTA 75 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 + R L ++Q+D+ +T+ E F Y D GF+++K I + L+G Sbjct: 76 QTRGPLLDNEQVDM--DIATFTITDERKKLYNFTSPYYTDASGFLVNKSAKIKKIEDLNG 133 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 +I V G+ T+ + + K + + + E+ + AHR DA++ D S L Sbjct: 134 KTIGVAQGSITQRLITELGKKKGLTFKFVELGSYPELITSLHAHRIDAFSVDRSIL 189 >gi|84497113|ref|ZP_00995935.1| putative transporter substrate-binding protein [Janibacter sp. HTCC2649] gi|84382001|gb|EAP97883.1| putative transporter substrate-binding protein [Janibacter sp. HTCC2649] Length = 324 Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 42/136 (30%), Positives = 73/136 (53%), Gaps = 5/136 (3%) Query: 23 NASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 +AS +G IK RG L G+ +T L+G + G +GFD+D + ++ AI +K++ Sbjct: 72 SASTMGKIKARGRLIAGVSADTRLLG-SRNPLLGRIEGFDIDLVQQIADAILGPNAKVEL 130 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + A +R LQ+ Q+D++ RN T R + +AF Y GQ ++ K I+ + Sbjct: 131 RVITAADRLPVLQNHQVDVVVRNMTITCDRWKT--IAFSAEYYRAGQKILIRKGSTITGL 188 Query: 141 SQLSGASICVQAGTTT 156 + L+G +C GT++ Sbjct: 189 ASLAGKRVCAPTGTSS 204 >gi|32490940|ref|NP_871194.1| hypothetical protein WGLp191 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25166146|dbj|BAC24337.1| fliY [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 290 Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 72/261 (27%), Positives = 117/261 (44%), Gaps = 22/261 (8%) Query: 1 MYKDFFVSILCLIIL--FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWK 57 + K+FF S+L IIL FF + AS L DIKK G L+ I F ++ N Sbjct: 32 LNKNFFNSLLKSIILISFFIFNLSFASKLEDIKKSGLLRVAIFDSNPPFGKIDLKNHSII 91 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G+D DF + +++ + K++ +P N R LQS ++D++ + T RE + + Sbjct: 92 GYDADFSKEIANIL---GVKLKLIPTNPSNRIPLLQSGKVDLIIADITITKEREKVINFS 148 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF-KAHNMKYH--PI 174 + YF ++ K + + S I GTT + TL D KA + Y P+ Sbjct: 149 ---VPYFVTHQKLLVNKYSSNELKDYSFDKIGAVKGTTGQKTLHDILPKAQIISYEDIPM 205 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 F +A R A T D + L L L ++ IL + ISK + + +G+ Sbjct: 206 AF-------SALRNGNVKAITQDSTILSGLLLAAPDKDKYKILQETISKEVIGIGVKKGE 258 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 + ++S + A+ EE G Sbjct: 259 DD---LLSEVNKALKILEESG 276 >gi|227508309|ref|ZP_03938358.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227192198|gb|EEI72265.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 282 Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 18/218 (8%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 IKK+G ++ + L + V +G G+DV ++ D K++++ +NA R Sbjct: 43 IKKKGTIRVAVFGDLPPYGWVNKDGKRVGYDVKLAHQVAK---DLGVKVKFVQVNANNRV 99 Query: 90 LALQSKQIDILSRNTDWTLLRE--ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 AL S ++D++ N T R+ +S + ++ G + K K I+ VSQL + Sbjct: 100 DALNSNKVDLVLANFTVTPERKQVVSFAKPYMKVSV----GVVSPKNKPITKVSQLQNKN 155 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 + V GTT E +YF + + F+ + A + R A D S LYA + Sbjct: 156 VIVTKGTTAE----NYFTSKQPNVKLLKFDSKTQQFNALKNGRGVALADDNSYLYAWSKS 211 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 N + + V + I KS +APA+ +G+ N WT+ Sbjct: 212 NSKYT--VGIKSIGPKSYIAPAVKKGNKSLLN---WTN 244 >gi|120612858|ref|YP_972536.1| extracellular solute-binding protein [Acidovorax citrulli AAC00-1] gi|120591322|gb|ABM34762.1| amino acid ABC transporter substrate-binding protein, PAAT family [Acidovorax citrulli AAC00-1] Length = 303 Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 7/212 (3%) Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSR 102 F + + G G+ VD C+A+ I + +++Y ++A ER L++ +ID+ Sbjct: 53 FVDAQNGGKAAGYSVDLCQAVVEEIKNTLKLKDLEVKYRTVSAAERIPKLEAGEIDLECG 112 Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162 +T T R+ + AF P + G ++ K +V L+G ++ V G+T+E L Sbjct: 113 STTNTKARQERV--AFGPTMFVAGIRVLVPKGTKADTVQNLAGMTVAVSKGSTSEKLLTQ 170 Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222 A+ +K VF+ +E A RA A+ D S L L N + ++S Sbjct: 171 -LTANEVKAKVKVFDNNDEAFKALRAGTVKAFAQDDSLLLGLVARNKAQDALALGHFVLS 229 Query: 223 KSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 P A + + DT +V T + T+ E+ Sbjct: 230 VEPYAIMVRKNDTALMTVVDRTLGKLYTSREI 261 >gi|226310804|ref|YP_002770698.1| glutamine ABC transporter substrate binding protein [Brevibacillus brevis NBRC 100599] gi|226093752|dbj|BAH42194.1| glutamine ABC transporter substrate binding protein [Brevibacillus brevis NBRC 100599] Length = 283 Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 54/227 (23%), Positives = 100/227 (44%), Gaps = 11/227 (4%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPS 76 T + L IK+R G+ L F + A G+ +GFD+D +A++ + D + Sbjct: 40 TPAAAGTGTLAKIKERDKFVVGVKYDLNLFGLKDPATGNVEGFDIDIAKAIAKKVLGDEN 99 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 KI+ + +K R L++ +ID + T+ + + F + + GQ F++ K Sbjct: 100 KIELKEVTSKTRIPMLKNGEIDAIIAT--MTITEDRKKEVDFSDVYFLAGQSFLVKKDSP 157 Query: 137 ISSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I+ + + G I G+T+ A +A + FE E A +A + DA T Sbjct: 158 INGLKDMQKGMKIVTAKGSTS----AKNIRASAPDVEVLEFENYAEAFTALKAGQGDALT 213 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 D + LY + + + + + ++ P AI +GD E+ V+ Sbjct: 214 TDNALLYGMA---KQDPNYRVTEETFTEEPYGIAISKGDAEFVKTVN 257 >gi|94309635|ref|YP_582845.1| extracellular solute-binding protein [Cupriavidus metallidurans CH34] gi|93353487|gb|ABF07576.1| putative amino-acid-binding periplasmic abc transporter protein [Cupriavidus metallidurans CH34] Length = 282 Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 59/227 (25%), Positives = 104/227 (45%), Gaps = 13/227 (5%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 + DIK +G L CG+ F+ V A + G+DVD C A++ ++ P Q ++ Sbjct: 33 IADIKAKGQLVCGVLGTDEPFSFVDPATREIVGYDVDMCNAVAKSLGVKPVLKQ---ISV 89 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 R LQ +D+L+ + RE + + T+ GQ ++ K+ GI+++ QL G Sbjct: 90 AARLPELQQGHVDLLAASLTHNKERESQIDFSLS--TFITGQKAMVRKESGITTLGQLDG 147 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 I G+T E +A K + + F+ + A + AY D ++L + Sbjct: 148 KKILTVKGSTMESNIAAKIKNATV----VSFDNSPQALLALEQGKGVAYVNDETSLVS-N 202 Query: 206 LTNDRPS--EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 L P+ ++ ++P +S LA I +G+T + N V+ M T Sbjct: 203 LVKLGPAAKDYTLVPQYLSSEHLALGIRKGETGFRNQVNQVLSKMET 249 >gi|307246618|ref|ZP_07528689.1| hypothetical protein appser1_18140 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306852490|gb|EFM84724.1| hypothetical protein appser1_18140 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] Length = 298 Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 53/223 (23%), Positives = 105/223 (47%), Gaps = 10/223 (4%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 ST + IK++G ++ G+ F V ANG +GFDV+ + +++ + P K+++ Sbjct: 52 STAKDSVAQIKEKGVIRIGVFGDKPPFGYVDANGKNQGFDVEIAKEIANDLLGSPDKVEF 111 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD-GQGFIMHKKKGISS 139 + A R L+S ++D++ N T R + A Y + G + K I+ Sbjct: 112 VLTEAANRVEYLKSNKVDLILANFTKTPERAEVVDFA---APYMNVALGVVSPKGALITD 168 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + QL G ++ V GTT + YF ++ + + + F++ E A + R A D + Sbjct: 169 LKQLEGKTLLVNKGTTADA----YFTKNHPEINLLKFDQNTETFDALKDGRGVALAHDNA 224 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 ++A N P+ V + + +APA+ +G+ ++++ Sbjct: 225 LVWAWAKEN--PTFDVAIGSVGPAEQIAPAVQKGNQALLDVIN 265 >gi|307248744|ref|ZP_07530757.1| hypothetical protein appser2_17100 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306854671|gb|EFM86861.1| hypothetical protein appser2_17100 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 298 Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 53/223 (23%), Positives = 105/223 (47%), Gaps = 10/223 (4%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 ST + IK++G ++ G+ F V ANG +GFDV+ + +++ + P K+++ Sbjct: 52 STAKDSVAQIKEKGVIRIGVFGDKPPFGYVDANGKSQGFDVEIAKEIANDLLGSPDKMEF 111 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD-GQGFIMHKKKGISS 139 + A R L+S ++D++ N T R + A Y + G + K I+ Sbjct: 112 VLTEAANRVEYLKSNKVDLILANFTKTPERAEVVDFA---APYMNVALGVVSPKGALITD 168 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + QL G ++ V GTT + YF ++ + + + F++ E A + R A D + Sbjct: 169 LKQLEGKTLLVNKGTTADA----YFTKNHPEINLLKFDQNTETFDALKDGRGVALAHDNA 224 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 ++A N P+ V + + +APA+ +G+ ++++ Sbjct: 225 LVWAWAKEN--PTFDVAIGSVGPAEQIAPAVQKGNQALLDVIN 265 >gi|262278743|ref|ZP_06056528.1| amino acid ABC transporter periplasmic protein [Acinetobacter calcoaceticus RUH2202] gi|262259094|gb|EEY77827.1| amino acid ABC transporter periplasmic protein [Acinetobacter calcoaceticus RUH2202] Length = 288 Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 64/255 (25%), Positives = 116/255 (45%), Gaps = 23/255 (9%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S + IKK G ++ G+ + F + A G +GFDV+ + ++ + D +K++++ Sbjct: 43 SSIEQIKKNGVVRIGVFSDKPPFGYLDAQGKNQGFDVEIAKHVAKDLLGDENKVEFVLTE 102 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 A R L++ ++DI+ N T R+ + A +P G + K I+ ++QL Sbjct: 103 AANRVEYLKANKVDIIFANFTVTPERKEVVDFA-KPYLKV-ALGVVSPKSHPITDIAQLK 160 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIV----FERVEEIDAAYRAHRCDAYTGDISA 200 ++ V GTT AD F K HP + +E+ E A + R A D Sbjct: 161 DKTLLVNKGTT-----ADSF---FTKTHPEIKLQKYEQNTETFDALKDGRGAALAHD--N 210 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT--- 257 L L + P+ V + ++ + +APA+ +GD E ++ W + + + G+ Sbjct: 211 LLVLAWAKENPNYTVGITNLGEQDLIAPAVKKGDKE---LLDWLNQDLEKLAKEGVIHQA 267 Query: 258 -QKNINQVSKDTTNP 271 +K + V DT NP Sbjct: 268 YKKTLKPVYGDTINP 282 >gi|326789993|ref|YP_004307814.1| ABC transporter periplasmic protein [Clostridium lentocellum DSM 5427] gi|326540757|gb|ADZ82616.1| ABC-type transporter, periplasmic subunit family 3 [Clostridium lentocellum DSM 5427] Length = 288 Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 57/224 (25%), Positives = 101/224 (45%), Gaps = 12/224 (5%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 +S +AS + IK+RG ++ G+ + F V NG +G+DV F + ++ + D + Sbjct: 31 SSNGESASGIEAIKERGKIRIGVFSDKPPFGYVDENGVNQGYDVYFAKRIAKDLLGDENA 90 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE--ISLGLAFRPITYFDGQGFIMHKKK 135 ++++ + A R LQS ++DI+ N T R + L + + G + Sbjct: 91 VEFVLVEAASRVEYLQSGKVDIILANFTVTKDRAEVVDFALPYMKVAL----GVVSPDGA 146 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I+ VSQL G + V GTT E YF + + ++ E A + R A Sbjct: 147 IITDVSQLEGKQLIVNKGTTAET----YFTENYPNIELLKYDENTEAFNALKDGRGAALA 202 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 D + ++A + N P + + +APA+ +G+TE N Sbjct: 203 HDNTLVFAWAIQN--PGFTTGIESLGGLDTIAPAVQKGNTELLN 244 >gi|170696121|ref|ZP_02887256.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] gi|170138936|gb|EDT07129.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] Length = 272 Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 65/232 (28%), Positives = 101/232 (43%), Gaps = 13/232 (5%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72 L S + +A L DIKK G L+ + GF + K+N G DVD+ RAL++ + Sbjct: 14 LLVMSAAAHADRLDDIKKAGVLRVAAFDSNPPFGFVDPKSN-QIVGLDVDYARALATRLG 72 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 K++ P N R L+S ++D++ N T R+ + + I YF + Sbjct: 73 ---VKLEIQPTNPANRIAFLKSGKVDLVFANFTITDDRKKEVDFS---IPYFASGTQFIA 126 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 KK ++S QL+G I GTT E + F + + I ++ AA R Sbjct: 127 KKGTLTSPQQLNGLRIGADKGTTNEQQVRAQFPSATI----IAYDDTPFAFAALRTGNVQ 182 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 A T D L AL + + I P IS + +G+T N+V+ T Sbjct: 183 AITQDGPKLVALLAKVPDKANYEIPPFTISNDYEGVGVPKGETRLLNVVNDT 234 >gi|117618623|ref|YP_855303.1| glutamine/glutamate ABC transporter, periplasmic glutamine/glutamate-binding protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117560030|gb|ABK36978.1| glutamine/glutamate ABC transporter, periplasmic glutamine/glutamate-binding protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 278 Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 57/238 (23%), Positives = 104/238 (43%), Gaps = 12/238 (5%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F ++L L + + + + S L IK R L G+ T F V G++ GFD D Sbjct: 8 LFSALLGLGLASGAAHAADGS-LDKIKARDKLIVGVFTDKPPFGYVDEKGNYVGFDTDLG 66 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 R + + D +K++++ + R LQS ++D++ N T+ E + F Sbjct: 67 RRFAKDLLGDENKVEFVAVEPASRIPFLQSDKVDLILANM--TVTPERRQVVDFTNPNLR 124 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ + + L+ ++ V GTT ++ + ++ + + FE+ E Sbjct: 125 VAVQVLVPQGSPAKQLDDLASKTLIVTTGTTADI----WLTRNHPDWKVLKFEKNTESLQ 180 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE---WYN 239 A R DAY D L++ N P V+ + S+ P+APA+ +G+ E W N Sbjct: 181 ALAQGRGDAYAQDNLVLFSWAKEN--PGYRVLPEKLGSEDPIAPAVKKGNIELRDWVN 236 >gi|307262182|ref|ZP_07543833.1| hypothetical protein appser12_17280 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306868159|gb|EFM99984.1| hypothetical protein appser12_17280 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 298 Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 53/223 (23%), Positives = 105/223 (47%), Gaps = 10/223 (4%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 ST + IK++G ++ G+ F V ANG +GFDV+ + +++ + P K+++ Sbjct: 52 STAKDSVAQIKEKGVIRIGVFGDKPPFGYVDANGKSQGFDVEIAKEIANDLLGSPDKMEF 111 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD-GQGFIMHKKKGISS 139 + A R L+S ++D++ N T R + A Y + G + K I+ Sbjct: 112 VLTEAANRVEYLKSNKVDLILANFTKTPERAEVVDFA---APYMNVALGVVSPKGALITD 168 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + QL G ++ V GTT + YF ++ + + + F++ E A + R A D + Sbjct: 169 LKQLEGKTLLVNKGTTADA----YFTKNHPEINLLKFDQNTETFDALKDGRGVALAHDNA 224 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 ++A N P+ V + + +APA+ +G+ ++++ Sbjct: 225 LVWAWAKEN--PTFDVAIGSVGPAEQIAPAVQKGNQALLDVIN 265 >gi|313890250|ref|ZP_07823884.1| major cell-binding factor [Streptococcus pseudoporcinus SPIN 20026] gi|313121355|gb|EFR44460.1| major cell-binding factor [Streptococcus pseudoporcinus SPIN 20026] Length = 272 Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 45/180 (25%), Positives = 87/180 (48%), Gaps = 6/180 (3%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYL 81 N+S + IKK G L+ G+ + F N G ++G +VD + ++ ++ P + Sbjct: 35 NSSAIKKIKKSGILRIGVKQDVPNFGYYSPNSGQYEGMEVDIAKKIAKSLKVKPV---FT 91 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 + A+ R L + Q+DI+ +T+ E +F Y D GF+++ + I+S+ Sbjct: 92 AVTAQTREALLDNGQLDIII--ATYTITPERQANYSFSKPYYRDEIGFLVNTSQKIASIK 149 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L+ A+I V G+TT+ + +Y + + + + E+ + A R A++ D S L Sbjct: 150 DLNHATIGVAQGSTTKAAIEEYARNKKLTFKFVQLGSYPELAISLYAKRIKAFSVDKSIL 209 >gi|227511321|ref|ZP_03941370.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus buchneri ATCC 11577] gi|227523527|ref|ZP_03953576.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus hilgardii ATCC 8290] gi|227085474|gb|EEI20786.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus buchneri ATCC 11577] gi|227089292|gb|EEI24604.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus hilgardii ATCC 8290] Length = 282 Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 18/218 (8%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 IKK+G ++ + L + V +G G+DV ++ D K++++ +NA R Sbjct: 43 IKKKGTIRVAVFGDLPPYGWVNKDGKRVGYDVKLAHQVAK---DLGVKVKFVQVNANNRV 99 Query: 90 LALQSKQIDILSRNTDWTLLRE--ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 AL S ++D++ N T R+ +S + ++ G + K K I+ VSQL + Sbjct: 100 DALNSNKVDLVLANFTVTPERKQVVSFAKPYMKVSV----GVVSPKNKPITKVSQLQNKN 155 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 + V GTT E +YF + + F+ + A + R A D S LYA + Sbjct: 156 VIVTKGTTAE----NYFTSKQPNVKLLKFDSKTQQFNALKNGRGVALADDNSYLYAWSKS 211 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 N + + V + I KS +APA+ +G+ N WT+ Sbjct: 212 NSKYT--VGIKSIGPKSYIAPAVKKGNESLLN---WTN 244 >gi|293608418|ref|ZP_06690721.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292828991|gb|EFF87353.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 288 Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 64/255 (25%), Positives = 116/255 (45%), Gaps = 23/255 (9%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S + IKK G ++ G+ + F + G +GFDV+ + ++ + D +K++++ Sbjct: 43 SSIEQIKKNGVVRIGVFSDKPPFGYLDVQGKNQGFDVEIAKHVAKDLLGDENKVEFVLTE 102 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 A R L++ ++DI+ N T R+ + A +P G + K I++V+QL Sbjct: 103 AANRVEYLKANKVDIIFANFTVTPERKEVVDFA-KPYLKV-ALGVVSPKSHPITNVAQLK 160 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIV----FERVEEIDAAYRAHRCDAYTGDISA 200 ++ V GTT AD F K HP + +E+ E A + R A D Sbjct: 161 DKTLLVNKGTT-----ADSF---FTKTHPEIKLQKYEQNTETFDALKDGRGAALAHD--N 210 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT--- 257 L L + P+ V + ++ + +APA+ +GD E ++ W + + + G+ Sbjct: 211 LLVLAWAKENPNYTVGITNLGEQDLIAPAVKKGDKE---LLDWLNPELEKLAKEGVIHQA 267 Query: 258 -QKNINQVSKDTTNP 271 +K + V DT NP Sbjct: 268 YEKTLKPVYGDTINP 282 >gi|37522352|ref|NP_925729.1| glutamine-binding protein [Gloeobacter violaceus PCC 7421] gi|35213352|dbj|BAC90724.1| glutamine-binding protein [Gloeobacter violaceus PCC 7421] Length = 260 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 49/243 (20%), Positives = 105/243 (43%), Gaps = 12/243 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M ++L + +L A+ L I +R +L G+ L G+ GF+ Sbjct: 1 MPAALRTAVLTVSLLALLQTVGAAAPLEAILQRRYLIVGVKENLYPLGFRDKRGELAGFE 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D R + A+F DP+ ++ +P+ ++R AL+ + +D++ N + R ++ +F Sbjct: 61 IDLARQFAEALFADPTAVKLVPVRNRDRLEALEKQHVDLVIANLSIGVPRARAVDFSFPY 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +T Q ++ ++ + ++S L + V +G++ E + + + + + Sbjct: 121 LTV--NQAVLLKRESTLRTLSDLERVRLAVLSGSSNERAIRAFLPGAGL----VPVASYQ 174 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK--SPLAPAIIQGDT--E 236 E A R D + D + L DRP+ ++ ++ + S P +Q D+ Sbjct: 175 EGVQALETGRADGFAADGTVLGG--WVQDRPAYRLLSTELDTSGLSVAMPRGLQNDSLRR 232 Query: 237 WYN 239 W N Sbjct: 233 WVN 235 >gi|182419546|ref|ZP_02950794.1| glutamine-binding protein [Clostridium butyricum 5521] gi|237668292|ref|ZP_04528276.1| glutamine-binding protein (GlnBP) [Clostridium butyricum E4 str. BoNT E BL5262] gi|182376581|gb|EDT74156.1| glutamine-binding protein [Clostridium butyricum 5521] gi|237656640|gb|EEP54196.1| glutamine-binding protein (GlnBP) [Clostridium butyricum E4 str. BoNT E BL5262] Length = 279 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 50/184 (27%), Positives = 83/184 (45%), Gaps = 3/184 (1%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSK 77 S S + + IK G LK G+ + F + G+ +GF+VD + ++ I D +K Sbjct: 40 SSSAEGADIQKIKDNGVLKVGVKVDVPKFGYKNPDTGEIEGFEVDLSKQIAKKILGDENK 99 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 I+ + AK R L + +ID+++ +T+ E F DG G ++ K G Sbjct: 100 IELQGVTAKTRGPLLDNGEIDMVAAT--FTITDERKKSYNFSDPYLTDGVGLLVKKDAGY 157 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 +S+ L+G +I V +TT+ L + + F EI AA + R D + D Sbjct: 158 TSLKDLNGKTIGVAQSSTTKKALEEEAANQGISLKFSEFGSYPEIKAALDSKRVDCFAVD 217 Query: 198 ISAL 201 S L Sbjct: 218 ASIL 221 >gi|188532628|ref|YP_001906425.1| Probable ABC transporter, periplasmic-binding protein [Erwinia tasmaniensis Et1/99] gi|188027670|emb|CAO95521.1| Probable ABC transporter, periplasmic-binding protein [Erwinia tasmaniensis Et1/99] Length = 280 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 61/227 (26%), Positives = 102/227 (44%), Gaps = 17/227 (7%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKI 78 F+ +A L DIKK G +K F V A + G+DVDF +AL+ + K+ Sbjct: 30 FAAHADRLADIKKAGVVKVATFDANPPFGSVDAKTHEIVGYDVDFAKALAKTLG---VKL 86 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 Q +P N R LQS + D++ D T+ E + + F + GQ F++ +S Sbjct: 87 QLVPTNPANRIPLLQSGKADLIV--ADITITPERAKVIDFSVPYFVTGQQFLVP----VS 140 Query: 139 SVSQLSG---ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 S +L G A I GTT E L + F + + +E + +A R A T Sbjct: 141 SPDKLDGYATARIGAVKGTTGEQELHNRFPQSRV----LSYEDIPLALSALRNGNVQAIT 196 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 D + L L +++ +LP+++SK + + +G+ +V+ Sbjct: 197 QDSTILAGLLDGAPDKAKYKVLPELLSKEEIGVGVKKGEASLLKVVN 243 >gi|197295090|ref|YP_002153631.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315] gi|195944569|emb|CAR57173.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315] Length = 313 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 55/232 (23%), Positives = 100/232 (43%), Gaps = 6/232 (2%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK---IQYLPL 83 L ++ G + G + F+ + A G+ ++ C+AL S+I D ++ I+++P+ Sbjct: 46 LAKVRGSGTIALGYRDASIPFSYLNARNQPIGYSIELCKALVSSIEDAINRSLTIRWVPV 105 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 + R A+ S ++D+ +T L R+ + AF PI + G ++ + I S L Sbjct: 106 TSDTRIDAVVSGKVDLECGSTTSNLERQKRV--AFSPIIFVAGTKVMVKRGAPIRSFRDL 163 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 +G + V AGTT E TL D + V + A DA+ D LY Sbjct: 164 AGKKVAVTAGTTNEKTLRDLNDKFRLGIQLQVVPDHAQGFALVANGGADAFATDDVLLYG 223 Query: 204 LKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 L N + ++ ++ D +S P + D + +V T + E+ Sbjct: 224 LIAENAGKGGQYDVVGDFLSYDPYGIMFRKDDPQLAQVVKTTFQELAADGEI 275 >gi|325697573|gb|EGD39458.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK160] Length = 291 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 60/230 (26%), Positives = 107/230 (46%), Gaps = 21/230 (9%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 +S + A L +IKK G L+ + + F V NG ++G+D+ L+ + P Sbjct: 37 SSKTVKARSLEEIKKSGKLRIAVFSDKKPFGYVDNNGKYQGYDIYLGDQLAKDLGVKP-- 94 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKK 135 +Y+P++A R L S ++DI N T R ++ L + ++ G + K Sbjct: 95 -EYVPVDAANRAEYLISNKVDITLANFTVTDERKKQVDFALPYMKVSL----GVVSPKGS 149 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA---HRCD 192 I+ QL G ++ + GTT E YF+ + Y I ++ ++ AY+A R D Sbjct: 150 VITKPEQLEGKTLIITKGTTAET----YFEKN---YPNIKLQKYDQYSDAYQALLDGRGD 202 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A++ D + + A L N V + + +APA+ +G+TE N ++ Sbjct: 203 AFSTDNTEVLAWALEN--KGFEVGITSLGDPDTIAPAVQKGNTELLNYIN 250 >gi|221212966|ref|ZP_03585942.1| extracellular solute-binding protein, family 3 [Burkholderia multivorans CGD1] gi|221167179|gb|EED99649.1| extracellular solute-binding protein, family 3 [Burkholderia multivorans CGD1] Length = 312 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 71/230 (30%), Positives = 101/230 (43%), Gaps = 21/230 (9%) Query: 21 STNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 + A L DIKK G L+ + G+ + K N G DVD+ +AL+ + K+ Sbjct: 62 AAQADRLDDIKKAGVLRVATFDSNPPFGYVDAKTN-RIVGLDVDYAKALADKL---GVKL 117 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD-GQGFIMHKKKGI 137 Q P N R L S ++D++ N +T+ E + + F I YF GQ F + KK + Sbjct: 118 QLQPTNPANRIPFLTSGKVDLVLAN--FTITEERAKQVDFS-IPYFSSGQQF-LAKKGVL 173 Query: 138 SSVSQLSGASICVQAGTTTELTLADYF-KAHNMKYH--PIVFERVEEIDAAYRAHRCDAY 194 S QL+G I GTT E+TL + F KA + Y P F AA RA A Sbjct: 174 KSADQLNGLRIGADKGTTNEITLREKFPKATIVAYDDTPFAF-------AALRAGNVQAI 226 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 T D L L + I P IS + + +G+T V+ T Sbjct: 227 TQDGPKLIGLLANVPDKQNYEIPPFTISNDYMGVGVPKGETRLLGFVNDT 276 >gi|303253108|ref|ZP_07339257.1| putative ABC transporter, periplasmic binding protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302647790|gb|EFL77997.1| putative ABC transporter, periplasmic binding protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226] Length = 278 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 53/223 (23%), Positives = 105/223 (47%), Gaps = 10/223 (4%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 ST + IK++G ++ G+ F V ANG +GFDV+ + +++ + P K+++ Sbjct: 32 STAKDSVAQIKEKGVIRIGVFGDKPPFGYVDANGKSQGFDVEIAKEIANDLLGSPDKMEF 91 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD-GQGFIMHKKKGISS 139 + A R L+S ++D++ N T R + A Y + G + K I+ Sbjct: 92 VLTEAANRVEYLKSNKVDLILANFTKTPERAEVVDFA---APYMNVALGVVSPKGALITD 148 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + QL G ++ V GTT + YF ++ + + + F++ E A + R A D + Sbjct: 149 LKQLEGKTLLVNKGTTADA----YFTKNHPEINLLKFDQNTETFDALKDGRGVALAHDNA 204 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 ++A N P+ V + + +APA+ +G+ ++++ Sbjct: 205 LVWAWAKEN--PTFDVAIGSVGPAEQIAPAVQKGNQALLDVIN 245 >gi|237786244|ref|YP_002906949.1| putative extracellular solute-binding protein [Corynebacterium kroppenstedtii DSM 44385] gi|237759156|gb|ACR18406.1| putative extracellular solute-binding protein [Corynebacterium kroppenstedtii DSM 44385] Length = 370 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 7/138 (5%) Query: 21 STNASILGDIKKRGFLKCGINTGL--VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 ST + DI +RG + G+++ L +GF + ++G+ +GFDV R ++ IF DP +I Sbjct: 111 STPEERIPDIVRRGRIIVGVSSSLNFLGFQD-PSSGNLEGFDVSLAREIARDIFGDPERI 169 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM-HKKKGI 137 + L++ ER ALQ +DI+ R T+ RE +AF Y Q I+ I Sbjct: 170 DFRFLSSAERVDALQHGNVDIVVRT--MTIDRERRAKVAFS-APYLHAQARILASTSSSI 226 Query: 138 SSVSQLSGASICVQAGTT 155 S L A++CV +T Sbjct: 227 QSADDLRDATVCVPKDST 244 >gi|324992111|gb|EGC24033.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK405] gi|324994205|gb|EGC26119.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK678] gi|327459422|gb|EGF05768.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK1] gi|327472830|gb|EGF18257.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK408] Length = 291 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 60/230 (26%), Positives = 107/230 (46%), Gaps = 21/230 (9%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 +S + A L +IKK G L+ + + F V NG ++G+D+ L+ + P Sbjct: 37 SSKTVKARSLEEIKKSGKLRIAVFSDKKPFGYVDNNGKYQGYDIYLGDQLAKDLGVKP-- 94 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKK 135 +Y+P++A R L S ++DI N T R ++ L + ++ G + K Sbjct: 95 -EYVPVDAANRAEYLISNKVDITLANFTVTDERKKQVDFALPYMKVSL----GVVSPKGS 149 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA---HRCD 192 I+ QL G ++ + GTT E YF+ + Y I ++ ++ AY+A R D Sbjct: 150 VITKPEQLEGKTLIITKGTTAET----YFEKN---YPNIKLQKYDQYSDAYQALLDGRGD 202 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A++ D + + A L N V + + +APA+ +G+TE N ++ Sbjct: 203 AFSTDNTEVLAWALEN--KGFEVGITSLGDPDTIAPAVQKGNTELLNYIN 250 >gi|307710649|ref|ZP_07647082.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus mitis SK564] gi|307618592|gb|EFN97735.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus mitis SK564] Length = 264 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 56/205 (27%), Positives = 97/205 (47%), Gaps = 10/205 (4%) Query: 1 MYKDFFVSILCLIILF---FTSFSTNASILGDIKKRGFLKCGINTGLVGFA-EVKANGDW 56 M K FF+S L LI LF T + + DI+KRG L G+ + F + G + Sbjct: 1 MKKKFFLSAL-LISLFGLAATKPVQADTSVADIQKRGELVVGVKQDVPNFGYKDPKTGTY 59 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G + D + ++ + K++Y+P+ A+ R L ++Q+D+ +T+ E Sbjct: 60 SGIETDLAKMVADEL---KVKVRYVPVTAQTRGPLLDNEQVDM--DIATFTITDERKKLY 114 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F Y D GF+++K I + L+G +I V G+ T+ + + K +K+ + Sbjct: 115 NFTNPYYTDASGFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVEL 174 Query: 177 ERVEEIDAAYRAHRCDAYTGDISAL 201 E+ + AHR DA++ D S L Sbjct: 175 GSYPELITSLHAHRIDAFSVDRSIL 199 >gi|325266789|ref|ZP_08133461.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Kingella denitrificans ATCC 33394] gi|324981721|gb|EGC17361.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Kingella denitrificans ATCC 33394] Length = 293 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 59/250 (23%), Positives = 109/250 (43%), Gaps = 15/250 (6%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L IK G ++ G+ F + ANG +GFDV+ R ++ + P K++++ A Sbjct: 50 LARIKAAGVIRIGVFGDKPPFGYLDANGKSQGFDVEIARNMAQDLLGSPDKVEFVLTEAA 109 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 R ++S ++D+L N T R + A + G + K I+S+ QL G Sbjct: 110 NRVEYIKSGKVDVLLANFTQTPERAEVVDFAAPYMQV--ALGVVSPKNAPITSIDQLKGK 167 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 ++ V GTT + YF ++ +++ E A + R A D + L+A Sbjct: 168 TLLVNKGTTADA----YFTKNHSDITLQKYDQNTETFDALKDGRGVALAHDNALLWAWAK 223 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG----ITQKNIN 262 N P+ V + + +APA+ +GD +++W + + ++ G +K + Sbjct: 224 EN--PNFDVAIGKLGEPENIAPAVQKGDQA---LLAWVNSEITAMKQDGRLVAAYEKTLR 278 Query: 263 QVSKDTTNPD 272 V D P+ Sbjct: 279 PVYGDKVKPE 288 >gi|254518100|ref|ZP_05130156.1| amino-acid ABC transporter periplasmic solute-binding protein [Clostridium sp. 7_2_43FAA] gi|226911849|gb|EEH97050.1| amino-acid ABC transporter periplasmic solute-binding protein [Clostridium sp. 7_2_43FAA] Length = 288 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 57/213 (26%), Positives = 94/213 (44%), Gaps = 11/213 (5%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 IKK G ++ G+ + F V G +G+DV + L+ + D +K++++ + A R Sbjct: 48 IKKAGKIRIGVFSDKPPFGFVDEKGANQGYDVYLAKRLAKDLLGDENKVEFVLVEAANRV 107 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 LQS ++DI+ N T R+ + A + G + I SV L G + Sbjct: 108 EYLQSNKVDIILANFTVTPERKEKVDFATPYMKV--SLGVVSPDGAPIKSVDDLKGKKLL 165 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V GTT E YF + + FE+ E AA + R A D + L+A N+ Sbjct: 166 VNKGTTAE----SYFTKNYPDIELVKFEQNTETFAALKDGRGAALAHDNTLLFAWARENE 221 Query: 210 RPSEHVILPDIISKSPLAPAIIQGDT---EWYN 239 ++ + + +APA+ +GD EW N Sbjct: 222 GYDTYI--SSLGEEDAIAPAVKKGDAELLEWLN 252 >gi|302523732|ref|ZP_07276074.1| amino acid ABC transporter ATP-binding protein [Streptomyces sp. AA4] gi|302432627|gb|EFL04443.1| amino acid ABC transporter ATP-binding protein [Streptomyces sp. AA4] Length = 321 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 5/152 (3%) Query: 12 LIILFFTSFSTNASILGDIKKRGFLKCGIN--TGLVGFAEVKANGDWKGFDVDFCRALSS 69 L L T+ L IK+RG L G++ T L GF K G +GFD+D ++ Sbjct: 64 LASLAPNGLDTSGPSLQKIKQRGKLIAGVDQTTYLFGFRNPK-TGKLEGFDIDLVNEIAR 122 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 IF +QY + + +R L+ Q+D++ R T R + F + Y GQ Sbjct: 123 QIFGSDGHVQYRAITSSQRETVLKEHQVDVVVRTYSITCARRKQ--VQFSSVYYVAGQKI 180 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 ++ K S++ L+G +C A +T+ +A Sbjct: 181 LVPKSSNAQSLTDLAGKRVCAAAKSTSLAKIA 212 >gi|322833092|ref|YP_004213119.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602] gi|321168293|gb|ADW73992.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602] Length = 280 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 60/234 (25%), Positives = 104/234 (44%), Gaps = 11/234 (4%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALS 68 L L I ++F+ +A L DIKK G +K F + A D G+DVDF +AL+ Sbjct: 20 LVLAISTLSTFTAHADQLADIKKAGVVKVATFDSNPPFGSLDAKTHDIVGYDVDFAKALA 79 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 + K+Q +P N R LQS + D++ D T+ E + + F + GQ Sbjct: 80 KTLG---VKLQLVPTNPANRIPLLQSGKADLIV--ADITITPERAKVIDFSVPYFVTGQQ 134 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 F++ + + A I GTT E L + F + + ++ + +A R Sbjct: 135 FLVPAGSP-DKLDAYATARIGAVKGTTGEQELHNRFPQSRV----LSYDDIPLALSALRN 189 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A T D + L L +++ +LP+++SK + + +G+T +V+ Sbjct: 190 GNVQAITQDSTILAGLLDGAPDKAKYKVLPELLSKEEIGVGVKKGETSLLKVVN 243 >gi|161524794|ref|YP_001579806.1| extracellular solute-binding protein [Burkholderia multivorans ATCC 17616] gi|189350452|ref|YP_001946080.1| polar amino acid transporter substrate-binding protein [Burkholderia multivorans ATCC 17616] gi|160342223|gb|ABX15309.1| extracellular solute-binding protein family 3 [Burkholderia multivorans ATCC 17616] gi|189334474|dbj|BAG43544.1| polar amino acid transport system substrate-binding protein [Burkholderia multivorans ATCC 17616] Length = 271 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 71/227 (31%), Positives = 100/227 (44%), Gaps = 21/227 (9%) Query: 24 ASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 A L DIKK G L+ + G+ + K N G DVD+ +AL+ + K+Q Sbjct: 24 ADRLDDIKKAGVLRVATFDSNPPFGYVDAKTN-RIVGLDVDYAKALADKLG---VKLQLQ 79 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD-GQGFIMHKKKGISSV 140 P N R L S ++D++ N +T+ E + + F I YF GQ F + KK + S Sbjct: 80 PTNPANRIPFLTSGKVDLVLAN--FTITEERAKQVDFS-IPYFSSGQQF-LAKKGVLKSA 135 Query: 141 SQLSGASICVQAGTTTELTLADYF-KAHNMKYH--PIVFERVEEIDAAYRAHRCDAYTGD 197 QL+G I GTT E+TL + F KA + Y P F AA RA A T D Sbjct: 136 DQLNGLRIGADKGTTNEITLREKFPKATIVAYDDTPFAF-------AALRAGNVQAITQD 188 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 L L + I P IS + + +G+T V+ T Sbjct: 189 GPKLIGLLANVPDKQNYEIPPFTISNDYMGVGVPKGETRLLAFVNDT 235 >gi|319793095|ref|YP_004154735.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] gi|315595558|gb|ADU36624.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] Length = 299 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 55/252 (21%), Positives = 108/252 (42%), Gaps = 10/252 (3%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 ++ +++F S + A L +K G + G+ G + G + GF V+ C + Sbjct: 10 AVASALVVFCASAAAEADTLKKLKDTGVITMGVRDGSGAISFTTGPGKYTGFHVEICERV 69 Query: 68 SSAIFD----DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 + I D +++Y + + R +Q+ +DI T R+ + AF P Y Sbjct: 70 IADIKKSAQLDKLEVRYQLVTPQNRIPLVQNGTVDIECGTTTNNAARQKEV--AFAPTLY 127 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 +G + I S +QL+G + +G+T+ + L K+ + ++ + E Sbjct: 128 VEGVRIAVKANSPIKSTTQLAGKTAAATSGSTS-VQLLRKLKSDATE---LMAKDNSEGF 183 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 R DA+ D L L + P+++ +L I+S P+A + +GD+ + V Sbjct: 184 LLLETGRADAFVADGQILATLISKSKEPAQYRLLDQILSTEPIAIMLPKGDSAFKKAVDQ 243 Query: 244 THYAMVTAEELG 255 + AM + E+ Sbjct: 244 SIEAMARSGEVA 255 >gi|115360990|ref|YP_778127.1| extracellular solute-binding protein [Burkholderia ambifaria AMMD] gi|115286318|gb|ABI91793.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia ambifaria AMMD] Length = 313 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 55/232 (23%), Positives = 99/232 (42%), Gaps = 6/232 (2%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK---IQYLPL 83 L ++ G + G + F+ + A G+ ++ C+AL S+I D +K I+++P+ Sbjct: 46 LAKVRSSGTIALGYRDASIPFSYLNARNQPIGYSIELCKALVSSIEDAVNKSLTIRWVPV 105 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 + R A+ S +D+ +T L R+ + AF PI + G ++ + I S L Sbjct: 106 TSDNRIDAVVSGNVDLECGSTTSNLERQQRV--AFSPIIFVAGTKVMVKRGSPIRSFRDL 163 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 + + V AGTT E L D + V + A + R DA+ D LY Sbjct: 164 AAKKVAVTAGTTNEKALRDLDARFKLGIQLQVVPDHAQGFALVASGRADAFATDDVLLYG 223 Query: 204 LKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 L N + ++ ++ D +S P + D + +V T + E+ Sbjct: 224 LIAENAGKGGQYDVVGDYLSYDPYGIMFRKDDPQLAQVVKSTFEELAVDGEI 275 >gi|299783155|gb|ADJ41153.1| ABC transporter substrate binding component [Lactobacillus fermentum CECT 5716] Length = 284 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 68/271 (25%), Positives = 119/271 (43%), Gaps = 26/271 (9%) Query: 5 FFVSILCLIILF-FTSFS--------TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 V +L ++ +F SF+ +N S + IKKRG+++ + L + V +G Sbjct: 7 LIVGLLTVLSIFSLVSFAGLSSAKADSNQSSVSAIKKRGYIRIAVFGDLQPYGWVNKDGK 66 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G+DV R ++ D K++++ +NA R L S + D++ N T R+ + Sbjct: 67 RVGYDVRLARQIAK---DLGVKVKFVQVNANNRVDTLNSNKADLVLANFTVTDERKQVID 123 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY---H 172 A +P G + K I+ VSQL SI + GTT E +YF ++ K Sbjct: 124 FA-KPYMKV-SIGVVSLKSDPITKVSQLKNKSIIINKGTTAE----NYFVSNQSKLGIKS 177 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + F+ + A + R +A D S LYA N P V + + ++PA+ + Sbjct: 178 ILKFDTKTQQFNALKNKRANALADDNSYLYAWVKKN--PKYTVGIKTLGPSQDISPAVKK 235 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 G+ N WT+ + + G + + N+ Sbjct: 236 GNKSLLN---WTNKEITKLNKDGFFKTDFNK 263 >gi|325693724|gb|EGD35643.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK150] Length = 312 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 60/230 (26%), Positives = 107/230 (46%), Gaps = 21/230 (9%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 +S + A L +IKK G L+ + + F V NG ++G+D+ L+ + P Sbjct: 58 SSKTVKARSLEEIKKSGKLRIAVFSDKKPFGYVDNNGKYQGYDIYLGDQLAKDLGVKP-- 115 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKK 135 +Y+P++A R L S ++DI N T R ++ L + ++ G + K Sbjct: 116 -EYVPVDAANRAEYLISNKVDITLANFTVTDERKKQVDFALPYMKVSL----GVVSPKGS 170 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA---HRCD 192 I+ QL G ++ + GTT E YF+ + Y I ++ ++ AY+A R D Sbjct: 171 VITKPEQLEGKTLIITKGTTAET----YFEKN---YPNIKLQKYDQYSDAYQALLDGRGD 223 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A++ D + + A L N V + + +APA+ +G+TE N ++ Sbjct: 224 AFSTDNTEVLAWALEN--KGFEVGITSLGDPDTIAPAVQKGNTELLNYIN 271 >gi|221197899|ref|ZP_03570945.1| extracellular solute-binding protein, family 3 [Burkholderia multivorans CGD2M] gi|221204543|ref|ZP_03577560.1| extracellular solute-binding protein, family 3 [Burkholderia multivorans CGD2] gi|221175400|gb|EEE07830.1| extracellular solute-binding protein, family 3 [Burkholderia multivorans CGD2] gi|221181831|gb|EEE14232.1| extracellular solute-binding protein, family 3 [Burkholderia multivorans CGD2M] Length = 338 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 71/230 (30%), Positives = 101/230 (43%), Gaps = 21/230 (9%) Query: 21 STNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 + A L DIKK G L+ + G+ + K N G DVD+ +AL+ + K+ Sbjct: 88 AAQADRLDDIKKAGVLRVATFDSNPPFGYVDAKTN-RIVGLDVDYAKALADKL---GVKL 143 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD-GQGFIMHKKKGI 137 Q P N R L S ++D++ N +T+ E + + F I YF GQ F+ KK + Sbjct: 144 QLQPTNPANRIPFLTSGKVDLVLAN--FTITEERAKQVDF-SIPYFSSGQQFLA-KKGVL 199 Query: 138 SSVSQLSGASICVQAGTTTELTLADYF-KAHNMKYH--PIVFERVEEIDAAYRAHRCDAY 194 S QL+G I GTT E+TL + F KA + Y P F AA RA A Sbjct: 200 KSADQLNGLRIGADKGTTNEITLREKFPKATIVAYDDTPFAF-------AALRAGNVQAI 252 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 T D L L + I P IS + + +G+T V+ T Sbjct: 253 TQDGPKLIGLLANVPDKQNYEIPPFTISNDYMGVGVPKGETRLLGFVNDT 302 >gi|145220806|ref|YP_001131484.1| extracellular solute-binding protein [Mycobacterium gilvum PYR-GCK] gi|145213292|gb|ABP42696.1| amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium gilvum PYR-GCK] Length = 324 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 20/211 (9%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTG--LVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 F T +A++ +IK RG L G++ G L F + G+ GFDVD ++ IF Sbjct: 71 FATQEEADAAV-ANIKARGRLIVGLDIGSNLFSFRD-PITGEITGFDVDIAGEIARDIFG 128 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE--ISLGLAFRPITYFDGQGFIM 131 PS+++Y L++ +R AL+ Q+D++ + T R+ ++ A+ Q + Sbjct: 129 TPSQVEYRILSSADRVDALRDNQVDVVVKTMTITCERKKLVNFSTAY----LIANQRILA 184 Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA--AYRAH 189 + I S LSG +CV GTT+ + + P++ V D A + Sbjct: 185 PRDSNIRQSSDLSGKRVCVAKGTTS------LERIQQISPPPLIVGVVTWADCLVALQQR 238 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDI 220 + DA + D + L L + P H++ P + Sbjct: 239 QVDAVSTDDAILAG--LVSQDPYLHIVGPSM 267 >gi|317049447|ref|YP_004117095.1| family 3 extracellular solute-binding protein [Pantoea sp. At-9b] gi|316951064|gb|ADU70539.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b] Length = 274 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 62/234 (26%), Positives = 96/234 (41%), Gaps = 16/234 (6%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 T+A L DIK RG L G+ + + NG+ GF++ R +++ + P KI+ + Sbjct: 22 THADTLSDIKARGVLTVGVKNDYPPYGYMDNNGNTVGFEISLARYIANELLGSPDKIKLV 81 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 P+NA R L S QIDI+ T R + ++ G + K + Sbjct: 82 PVNASNRMQFLNSGQIDIIMATLGVTPDRAKQIDFTDEYVSAA-GPSILARKAVKFTQWE 140 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA---HRCDAYTGDI 198 QL G IC G+ YF + + + + AYRA +RC A D Sbjct: 141 QLKGQKICGIQGS--------YFNKTVTEKYGLQLVNFTALPEAYRALQDNRCVAMVFDD 192 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 +L KL S++ I P+A + +GD + V A+V AE Sbjct: 193 MSLQN-KLKEPGWSDYKIAVKPYEYLPMAGGLRKGDDAFRAAVD---KAIVKAE 242 >gi|295698917|ref|YP_003606810.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] gi|295438130|gb|ADG17299.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] Length = 272 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 65/241 (26%), Positives = 105/241 (43%), Gaps = 13/241 (5%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDF 63 FV + +L S + +A L DIKK G L+ + GFA+ K N G DVD+ Sbjct: 5 FVGAAVMGLLLAISGAAHADRLDDIKKAGVLRVATFDSNAPFGFADPKTN-QIVGLDVDY 63 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 RA+++ + K++ P N R L+S ++D++ N +T+ E + F + Sbjct: 64 ARAVANKLG---VKLEIQPTNPANRIAFLKSGKVDLVFAN--FTITDERKKEVDFSTPYF 118 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 G FI KK ++S Q++G + GTT E + F + + ++ Sbjct: 119 ASGTQFIA-KKGVLTSPQQVNGLRVGADKGTTNEQQVRAQFPNATI----VAYDDTPFAF 173 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 AA RA A T D L AL + + I P IS + +G+T ++V Sbjct: 174 AALRAGNVQAITQDGPKLVALLANVPDKANYEIPPFTISNDYEGVGVPKGETRLLSVVDD 233 Query: 244 T 244 T Sbjct: 234 T 234 >gi|226304964|ref|YP_002764922.1| ABC transporter substrate-binding protein [Rhodococcus erythropolis PR4] gi|226184079|dbj|BAH32183.1| putative ABC transporter substrate-binding protein [Rhodococcus erythropolis PR4] Length = 334 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 40/133 (30%), Positives = 68/133 (51%), Gaps = 7/133 (5%) Query: 27 LGDIKKRGFLKCGINTG--LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 L I+ RG L G++TG L+ F + A G +GFDVD R ++ + DP KI+Y L Sbjct: 91 LDAIRARGRLIVGLDTGSNLMSFRD-PATGRLEGFDVDIAREIARDLLGDPEKIEYRILT 149 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI-MHKKKGISSVSQL 143 + +R ALQ +D++ + T R + + + YF + I + + + ++ L Sbjct: 150 SDDRIAALQESMVDVVVKTMTITCERREKVDFSTQ---YFSAEQRIQVLQGSPVRGIADL 206 Query: 144 SGASICVQAGTTT 156 +G +C GTT+ Sbjct: 207 AGKRVCAARGTTS 219 >gi|257062232|ref|YP_003140120.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 8802] gi|256592398|gb|ACV03285.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 8802] Length = 299 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 57/250 (22%), Positives = 107/250 (42%), Gaps = 13/250 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + IL L++ S+ A +L IK+ G + G + F + G W G+ Sbjct: 1 MGKKVTLFILTLVLATTGQASSWAGQVLEKIKQTGVINAGTRKDAIPFGYINEQGKWVGY 60 Query: 60 DVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +D + + P K+ + + ++RF ++ +DI +T +T R ++ Sbjct: 61 SLDVLEIIRKDVEKQLGKPIKLNLVEVTTQDRFNKIKDGSLDIECASTTFTWERNKTVDF 120 Query: 117 AFRPITYF-DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 ++YF G ++ K +GI SV L+G + V TT E + K ++ Sbjct: 121 T---VSYFASGTKVLVKKDRGIGSVETLAGLKVGVIPKTTNEQAI----KIQQPAAQLVM 173 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI-ISKSPLAPAIIQGD 234 + +E A DA+ D L LK + P+ ++P+ + A I Q Sbjct: 174 VKDRKEGLQKLEAGTIDAFASDGILLEGLKKESSNPNNLEVVPEFPYAYESYACMIPQDQ 233 Query: 235 TEWYNIVSWT 244 ++W N+V+++ Sbjct: 234 SQWRNMVNYS 243 >gi|184155299|ref|YP_001843639.1| ABC transporter substrate binding component [Lactobacillus fermentum IFO 3956] gi|227514602|ref|ZP_03944651.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus fermentum ATCC 14931] gi|260662187|ref|ZP_05863083.1| ABC transporter substrate binding component [Lactobacillus fermentum 28-3-CHN] gi|183226643|dbj|BAG27159.1| ABC transporter substrate binding component [Lactobacillus fermentum IFO 3956] gi|227087013|gb|EEI22325.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus fermentum ATCC 14931] gi|260553570|gb|EEX26462.1| ABC transporter substrate binding component [Lactobacillus fermentum 28-3-CHN] Length = 284 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 68/271 (25%), Positives = 119/271 (43%), Gaps = 26/271 (9%) Query: 5 FFVSILCLIILF-FTSFS--------TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 V +L ++ +F SF+ +N S + IKKRG+++ + L + V +G Sbjct: 7 LIVGLLTVLSIFSLVSFAGLSSAKADSNQSSVSAIKKRGYIRIAVFGDLQPYGWVNKDGK 66 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G+DV R ++ D K++++ +NA R L S + D++ N T R+ + Sbjct: 67 RVGYDVRLARQIAK---DLGVKVKFVQVNANNRVDTLNSNKADLVLANFTVTDERKQVVD 123 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY---H 172 A +P G + K I+ VSQL SI + GTT E +YF ++ K Sbjct: 124 FA-KPYMKV-SIGVVSLKSDPITKVSQLKNKSIIINKGTTAE----NYFVSNQSKLGIKS 177 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + F+ + A + R +A D S LYA N P V + + ++PA+ + Sbjct: 178 ILKFDTKTQQFNALKNKRANALADDNSYLYAWVKKN--PKYTVGIKTLGPSQDISPAVKK 235 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 G+ N WT+ + + G + + N+ Sbjct: 236 GNKSLLN---WTNKEITKLNKDGFFKTDFNK 263 >gi|167461572|ref|ZP_02326661.1| glutamine ABC transporter (glutamine-binding protein) [Paenibacillus larvae subsp. larvae BRL-230010] gi|322381527|ref|ZP_08055506.1| glutamine ABC transporter-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321154534|gb|EFX46831.1| glutamine ABC transporter-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 284 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 13/216 (6%) Query: 30 IKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 IK+RG L G+ +T L G + A+G+ G+DVDF +AL+ D +K++ +N+K Sbjct: 53 IKERGKLIVGVKYDTNLFGLKDP-ASGEVTGYDVDFAKALAKKFLGDENKLELEEVNSKT 111 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGA 146 R L + +ID + T+ E + F + + GQ ++ K I + + G Sbjct: 112 RIPMLDNGEIDAII--ATMTISEERKKQVDFSDVYFKAGQSLLVKKGSPIKGIGDIRKGT 169 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 + G T+ + + KA ++ + +E +E A +A + DA T D S LY + + Sbjct: 170 KVLTAKGATSGKNIKE--KAEGVQV--LEYENYQEAFNALKAGKGDALTTDNSILYGM-V 224 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 D E V P + P A+ +G+ E+ V+ Sbjct: 225 KQDPNFEVVGEP--FTDEPYGIAVKKGEAEFLKEVN 258 >gi|315442241|ref|YP_004075120.1| amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium sp. Spyr1] gi|315260544|gb|ADT97285.1| amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium sp. Spyr1] Length = 323 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 20/211 (9%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTG--LVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 F T +A++ +IK RG L G++ G L F + G+ GFDVD ++ IF Sbjct: 70 FATQEEADAAV-ANIKARGRLIVGLDIGSNLFSFRD-PITGEITGFDVDIAGEIARDIFG 127 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE--ISLGLAFRPITYFDGQGFIM 131 PS+++Y L++ +R AL+ Q+D++ + T R+ ++ A+ Q + Sbjct: 128 TPSQVEYRILSSADRVDALRDNQVDVVVKTMTITCERKKLVNFSTAY----LIANQRILA 183 Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA--AYRAH 189 + I S LSG +CV GTT+ + + P++ V D A + Sbjct: 184 PRDSNIRQSSDLSGKRVCVAKGTTS------LERIQQISPPPLIVGVVTWADCLVALQQR 237 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDI 220 + DA + D + L L + P H++ P + Sbjct: 238 QVDAVSTDDAILAG--LVSQDPYLHIVGPSM 266 >gi|227834107|ref|YP_002835814.1| putative extracellular solute-binding protein [Corynebacterium aurimucosum ATCC 700975] gi|262183407|ref|ZP_06042828.1| putative extracellular solute-binding protein [Corynebacterium aurimucosum ATCC 700975] gi|227455123|gb|ACP33876.1| putative extracellular solute-binding protein [Corynebacterium aurimucosum ATCC 700975] Length = 363 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 73/141 (51%), Gaps = 9/141 (6%) Query: 29 DIKKRGFLKCGIN--TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 DI RG L G++ L+ + + A+G+ +GF+VD R ++ IF DP+K+ + + A Sbjct: 92 DILARGRLIVGVDRSNNLLSYRDT-ASGEVRGFEVDIAREIARDIFGDPNKVDFRFVEAS 150 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 ER AL + +DI+ R + R+ + + P D + ++ K G+ S++ +G Sbjct: 151 ERARALNDRTVDIVIRTMTISPSRQREVSFSI-PYMQTDARLLVL-KNSGVESIADTAGM 208 Query: 147 SICVQAGTTTELTLADYFKAH 167 ++C G+ T+ D + H Sbjct: 209 TLCATKGS----TMVDAIRTH 225 >gi|15902578|ref|NP_358128.1| amino acid ABC transporter amino acid-binding protein [Streptococcus pneumoniae R6] gi|116516520|ref|YP_816032.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae D39] gi|15458109|gb|AAK99338.1| ABC transporter substrate-binding protein - glutamine transport/Major cell binding factor precursor [Streptococcus pneumoniae R6] gi|116077096|gb|ABJ54816.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae D39] Length = 264 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 55/205 (26%), Positives = 97/205 (47%), Gaps = 10/205 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFA-EVKANGDW 56 M K FF+S L LI LF + + + + DI+KRG L G+ + F + G + Sbjct: 1 MKKKFFLSAL-LISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTY 59 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G + D + ++ + KI+Y+P+ A+ R L ++Q+D+ +T+ E Sbjct: 60 SGIETDLAKMVADEL---KVKIRYVPVTAQTRGPLLDNEQVDM--DIATFTITDERKKLY 114 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F Y D GF+++K I + L+G +I V G+ T+ + + K +K+ + Sbjct: 115 NFTSPYYTDASGFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVEL 174 Query: 177 ERVEEIDAAYRAHRCDAYTGDISAL 201 E+ + AHR D ++ D S L Sbjct: 175 GSYPELITSLHAHRIDTFSVDRSIL 199 >gi|304405840|ref|ZP_07387498.1| extracellular solute-binding protein family 3 [Paenibacillus curdlanolyticus YK9] gi|304345083|gb|EFM10919.1| extracellular solute-binding protein family 3 [Paenibacillus curdlanolyticus YK9] Length = 283 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 63/249 (25%), Positives = 116/249 (46%), Gaps = 27/249 (10%) Query: 6 FVSILCLIILFFTSFSTN-----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 +SIL L L S S + + + IKK ++ GI F A+G +KG+D Sbjct: 8 ILSILLLAGLVGCSSSNDGKSAESGSIAAIKKADTIRIGIFADDAPFCYQDADGTFKGYD 67 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE----ISLGL 116 VD + ++ + D +KI ++ +N +R LQ+ + D++ D+T+ E + L Sbjct: 68 VDLGKRIAKELLGDENKISWVVVNPADRIPYLQTDKADLML--ADFTVTEERAKSVDFTL 125 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + ++ G + K I+SV L G ++ V GTT + YF + Y + Sbjct: 126 PYEKVSL----GVVSKDKAPINSVDDLKGKTLAVNTGTTAD----SYFTKN---YPDVKL 174 Query: 177 ERVEEIDAAYRA---HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 +++ I Y+A R DA+ D + L + N+ + V + ++ +K +A A+ QG Sbjct: 175 IKIDAITDGYQALITGRADAFAQDNTLLLSWAKKNEGYT--VGVKELGNKDYIAGAVKQG 232 Query: 234 DTEWYNIVS 242 + E + V+ Sbjct: 233 NKELLDYVN 241 >gi|218439818|ref|YP_002378147.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7424] gi|218172546|gb|ACK71279.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7424] Length = 298 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 58/250 (23%), Positives = 109/250 (43%), Gaps = 13/250 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 MYK F ++ + L++ + + A +L I++ G + G T + F G+W G+ Sbjct: 1 MYKQFAITAITLLLTVTSQAPSWAGRVLDRIRQTGVITAGARTDAIPFGYKNEKGEWVGY 60 Query: 60 DVD---FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +D R + P K+Q + + + RF ++ + IDI +T T RE + Sbjct: 61 SLDILELIRQETEKQLGKPIKLQLVEVTPENRFTKIKDQSIDIECGSTTVTWAREKEVDF 120 Query: 117 AFRPITYF-DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + ++YF G ++ K + +V L+G I V TT E + A + V Sbjct: 121 S---VSYFASGTKLLVKKGSQLETVESLAGMRIGVIPNTTNEKAIKFQQPAAQL---VTV 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI-ISKSPLAPAIIQGD 234 +R+E + + D + D L LK T + I+P+ A I Q + Sbjct: 175 KDRLEGLQKLEKGE-IDGFASDGIILEGLKQTASNSNALEIVPEYPYMYESYACVIPQDE 233 Query: 235 TEWYNIVSWT 244 ++W ++V+++ Sbjct: 234 SQWRDLVNYS 243 >gi|86152788|ref|ZP_01070993.1| glutamine-binding protein [Campylobacter jejuni subsp. jejuni HB93-13] gi|85843673|gb|EAQ60883.1| glutamine-binding protein [Campylobacter jejuni subsp. jejuni HB93-13] Length = 259 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 59/208 (28%), Positives = 97/208 (46%), Gaps = 8/208 (3%) Query: 13 IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAI 71 + + F++ + L IK +G L G+ + +A + +A G+ KGF+VD + L+ +I Sbjct: 17 VCVAFSNANAAEGKLESIKSKGQLIVGVKNDVPHYALLDQATGEIKGFEVDVAKLLAKSI 76 Query: 72 FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131 D KI+ + +NAK R L + +D + +T+ E F Y D G ++ Sbjct: 77 LGDDKKIKLVAVNAKTRGPLLDNGSVDAVIAT--FTITPERKRIYNFSEPYYQDAIGLLV 134 Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191 K+K S++ + GA+I V TT+ + K + F I AA A R Sbjct: 135 LKEKNYKSLADMKGANIGVAQAATTKKAIGKAAKKIGIDVKFSEFPDYPSIKAALDAKRV 194 Query: 192 DAYTGDISALYALKLTNDRPSEHVILPD 219 DA++ D S L L +D+ ILPD Sbjct: 195 DAFSVDKSIL--LGYVDDKSE---ILPD 217 >gi|83312881|ref|YP_423145.1| amino acid ABC transporter periplasmic protein [Magnetospirillum magneticum AMB-1] gi|82947722|dbj|BAE52586.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Magnetospirillum magneticum AMB-1] Length = 302 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 57/258 (22%), Positives = 110/258 (42%), Gaps = 7/258 (2%) Query: 3 KDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K F + + + + T + A L +K+ G + G+ + + + G+ V Sbjct: 2 KPFVLPLFLALAVISTGGAARAEPTLDKVKRTGSVVLGVREASYPLSYLDGDKKPIGYHV 61 Query: 62 DFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 D CR ++ A+ +++ + +K R L ID+ +T R+ + A Sbjct: 62 DICRRVTEAVKAQLGLAALEVRTEVVTSKTRIPRLLDGGIDLECGSTTNNAARQTQV--A 119 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F P TY + K I +SQL G ++ AG+T+ L + ++K + Sbjct: 120 FAPTTYVASVRIAVKKAAHIGKLSQLDGKAVATTAGSTSVQLLKARVQGRDIKVTELFGN 179 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E + + A+ D + L L ++ P ++ ILP ++ P+A + +GD E+ Sbjct: 180 DHAESFKMLESDQAAAFVMDDNLLAGLIASSAAPKDYQILPQTLNTEPIAIMLRKGDPEF 239 Query: 238 YNIVSWTHYAMVTAEELG 255 +V T AM+ + E+G Sbjct: 240 KALVDRTVKAMMESGEVG 257 >gi|46579165|ref|YP_009973.1| amino acid ABC transporter amino acid-binding protein [Desulfovibrio vulgaris str. Hildenborough] gi|120603261|ref|YP_967661.1| extracellular solute-binding protein [Desulfovibrio vulgaris DP4] gi|46448578|gb|AAS95232.1| amino acid ABC transporter, amino acid-binding protein [Desulfovibrio vulgaris str. Hildenborough] gi|120563490|gb|ABM29234.1| amino acid ABC transporter substrate-binding protein, PAAT family [Desulfovibrio vulgaris DP4] gi|311233003|gb|ADP85857.1| extracellular solute-binding protein family 3 [Desulfovibrio vulgaris RCH1] Length = 275 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 60/242 (24%), Positives = 108/242 (44%), Gaps = 18/242 (7%) Query: 9 ILCLIILFFTSFSTNASILG----DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 I+ L F F+ +A++ G ++ K ++ G+ T + G+W GFD D Sbjct: 6 IIALAAAFLV-FTGSAALAGPAYDNVMKDKKIRVGLMTDSIPGGFYNEKGEWGGFDYDIA 64 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 ++ + D ++Q +N K R +Q ++DI N T R+ S+ + ITYF Sbjct: 65 TEIAKRMGVDIERVQ---VNNKTRIAYVQQGRVDISVSNMTHTRERDKSVDFS---ITYF 118 Query: 125 -DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH---NMKYHPIVFERVE 180 DGQ ++ KK SV + G I GTT+E+ + K N I F++ Sbjct: 119 FDGQK-VLAKKGQFKSVKDMVGKKIATMQGTTSEVNVKRALKEAGDPNPDQSVISFQKES 177 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E A + R ++ D S L + + P + ++ + +++ P A+ Q D+ + Sbjct: 178 ECFQALQMGRVAGWSTDASIL--VGYSAKEPGKFELVGNFLAEEPYGIAMPQDDSALRDA 235 Query: 241 VS 242 V+ Sbjct: 236 VN 237 >gi|326384625|ref|ZP_08206303.1| extracellular solute-binding protein family 3 protein [Gordonia neofelifaecis NRRL B-59395] gi|326196592|gb|EGD53788.1| extracellular solute-binding protein family 3 protein [Gordonia neofelifaecis NRRL B-59395] Length = 328 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 42/136 (30%), Positives = 70/136 (51%), Gaps = 9/136 (6%) Query: 25 SILGDIKKRGFLKCGINTG--LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 S + I KRG L G + G + F + +GD KGFD+D +S+AIF DP+ I+Y Sbjct: 84 STMDRIAKRGRLVVGTDLGSNPLSFRD-PISGDVKGFDIDVAHWISAAIFGDPNLIEYRM 142 Query: 83 LNAKERFLALQSKQIDILSRNTDWTL--LREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + R AL++ +DI+ + T L+ +S + + Y Q + ++ GIS Sbjct: 143 ITNDNRSEALENGTVDIVVKTMSITCDRLKTVSFSVPY----YAASQQILAYRNSGISQA 198 Query: 141 SQLSGASICVQAGTTT 156 S L+G ++C +T+ Sbjct: 199 SDLAGKNVCATRSSTS 214 >gi|312141243|ref|YP_004008579.1| high affinity substrate binding lipoprotein [Rhodococcus equi 103S] gi|311890582|emb|CBH49900.1| putative high affinity substrate binding lipoprotein [Rhodococcus equi 103S] Length = 327 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 40/137 (29%), Positives = 72/137 (52%), Gaps = 7/137 (5%) Query: 23 NASILGDIKKRGFLKCGINTG--LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 +++ L I++RG L G++TG L+ F + + +GFDVD R ++ + P K+++ Sbjct: 80 DSASLDAIRQRGRLVVGLDTGSNLLSFRNPTTD-EIEGFDVDIAREIARDLLGSPDKVEF 138 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG-QGFIMHKKKGISS 139 LN ER AL+ ++DI+++ T R + + Y+D Q ++ + Sbjct: 139 RVLNYAEREQALEDGRVDIVAKTMAITCERRQRIDFS---TVYYDAHQRILVMAGSPVRD 195 Query: 140 VSQLSGASICVQAGTTT 156 VS L+G +CV GTT+ Sbjct: 196 VSDLAGRRVCVGEGTTS 212 >gi|229493071|ref|ZP_04386866.1| bacterial extracellular solute-binding protein, family 3 [Rhodococcus erythropolis SK121] gi|229320101|gb|EEN85927.1| bacterial extracellular solute-binding protein, family 3 [Rhodococcus erythropolis SK121] Length = 328 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 40/133 (30%), Positives = 67/133 (50%), Gaps = 7/133 (5%) Query: 27 LGDIKKRGFLKCGINTG--LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 L I+ RG L G++TG L+ F + A G +GFDVD R ++ + DP KI+Y L Sbjct: 85 LDAIRARGRLIVGLDTGSNLMSFRD-PATGRLEGFDVDIAREIARDLLGDPEKIEYRILT 143 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI-MHKKKGISSVSQL 143 + +R ALQ +D++ + T R + + + YF + I + + + + L Sbjct: 144 SDDRIAALQESMVDVVVKTMTITCERREKVDFSTQ---YFSAEQRIQVLQGSSVRGIDDL 200 Query: 144 SGASICVQAGTTT 156 +G +C GTT+ Sbjct: 201 AGKRVCAARGTTS 213 >gi|325673926|ref|ZP_08153616.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Rhodococcus equi ATCC 33707] gi|325555191|gb|EGD24863.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Rhodococcus equi ATCC 33707] Length = 327 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 40/137 (29%), Positives = 72/137 (52%), Gaps = 7/137 (5%) Query: 23 NASILGDIKKRGFLKCGINTG--LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 +++ L I++RG L G++TG L+ F + + +GFDVD R ++ + P K+++ Sbjct: 80 DSASLDAIRQRGRLVVGLDTGSNLLSFRNPTTD-EIEGFDVDIAREIARDLLGSPDKVEF 138 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG-QGFIMHKKKGISS 139 LN ER AL+ ++DI+++ T R + + Y+D Q ++ + Sbjct: 139 RVLNYAEREQALEDGRVDIVAKTMAITCERRQRIDFS---TVYYDAHQRILVMAGSPVRD 195 Query: 140 VSQLSGASICVQAGTTT 156 VS L+G +CV GTT+ Sbjct: 196 VSDLAGRRVCVGEGTTS 212 >gi|254252393|ref|ZP_04945711.1| ABC-type amino acid transport/signal transduction systems periplasmic component [Burkholderia dolosa AUO158] gi|124895002|gb|EAY68882.1| ABC-type amino acid transport/signal transduction systems periplasmic component [Burkholderia dolosa AUO158] Length = 271 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 67/227 (29%), Positives = 99/227 (43%), Gaps = 19/227 (8%) Query: 23 NASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 +A L DI+K G L+ + G+ + K+N G DVD+ +AL+ + K+Q Sbjct: 23 HADRLDDIRKAGVLRVATFDSNPPFGYVDAKSN-RIVGLDVDYAKALADKLG---VKLQL 78 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 P N R L S ++D++ N +T+ E + + F I YF + KK + S Sbjct: 79 QPTNPANRIPFLTSGKVDLVLAN--FTITDERAKQVDFS-IPYFSSGQQFLAKKGVLKSA 135 Query: 141 SQLSGASICVQAGTTTELTLADYF-KAHNMKYH--PIVFERVEEIDAAYRAHRCDAYTGD 197 QL+G I GTT E+TL + F KA + Y P F AA RA A T D Sbjct: 136 DQLNGLRIGADKGTTNEITLREKFPKATIVAYDDTPFAF-------AALRAGNVQAITQD 188 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 L L + I P IS + + +G+T V+ T Sbjct: 189 GPKLIGLLANVPDKQNYEIPPFTISNDYMGVGVPKGETRLLGFVNDT 235 >gi|218460738|ref|ZP_03500829.1| putative substrate-binding component of ABC transporter [Rhizobium etli Kim 5] Length = 279 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 66/271 (24%), Positives = 116/271 (42%), Gaps = 17/271 (6%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 L + L T S L ++ RG L G + + A+ +GFDVD R ++ Sbjct: 12 LVAVALLSTPVLAEGSKLDEVLARGHLVLGTGSTNAPWHFKSADDKLQGFDVDMGRIIAK 71 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 A+F DP KI+Y+ ++ R + + ++DI + T+ E + +AF Y +G G Sbjct: 72 ALFGDPEKIEYVNQSSDARIPNITTDKVDITCQFM--TVTGERAQQVAFTIPYYREGVGL 129 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI---VFERVEEIDAAY 186 ++ S + L AG++ +++ A M + + ++ E +D Y Sbjct: 130 MLKADGKYSDYAALK------TAGSSVTISVLQNVYAEAMVHAALPEATVDQYESVDLIY 183 Query: 187 RA---HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 +A R DA D S+L A +T + P + + A A+ +GD +W N V+ Sbjct: 184 QALESGRADAAATDQSSL-AWYMTQN-PGRYKDAGYGWNPQTYACAVKRGDQDWLNFVNT 241 Query: 244 THYAMVTAEELGITQKNINQ-VSKDTTNPDV 273 + +T E K+ KD T P + Sbjct: 242 ALHEAMTGVEFDFYAKSFKTWFGKDLTPPQI 272 >gi|168485722|ref|ZP_02710230.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae CDC1087-00] gi|221231432|ref|YP_002510584.1| putative glutamine-binding protein precursor [Streptococcus pneumoniae ATCC 700669] gi|298229830|ref|ZP_06963511.1| putative glutamine-binding protein precursor [Streptococcus pneumoniae str. Canada MDR_19F] gi|298255470|ref|ZP_06979056.1| putative glutamine-binding protein precursor [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502401|ref|YP_003724341.1| amino acid ABC superfamily transporter ATP-binding protein [Streptococcus pneumoniae TCH8431/19A] gi|183571134|gb|EDT91662.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae CDC1087-00] gi|220673892|emb|CAR68398.1| putative glutamine-binding protein precursor [Streptococcus pneumoniae ATCC 700669] gi|298237996|gb|ADI69127.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus pneumoniae TCH8431/19A] Length = 254 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 44/176 (25%), Positives = 82/176 (46%), Gaps = 6/176 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 + DI+KRG L G+ + F + G + G + D + ++ + KI+Y+P+ A Sbjct: 19 IADIQKRGELVVGVKQDVPNFGYKDPKTGTYSGIETDLAKMVADEL---KVKIRYVPVTA 75 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 + R L ++Q+D+ +T+ E F Y D GF+++K I + L+ Sbjct: 76 QTRGPLLDNEQVDM--DIATFTITDERKKLYNFTSPYYTDASGFLVNKSAKIKKIEDLNS 133 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 +I V G+ T+ + + K + + + E+ + AHR DA++ D S L Sbjct: 134 KTIGVAQGSITQCLITELGKKKGLTFKFVELGSYPELITSLHAHRIDAFSVDRSIL 189 >gi|94310068|ref|YP_583278.1| extracellular solute-binding protein [Cupriavidus metallidurans CH34] gi|93353920|gb|ABF08009.1| glutamate and aspartate transporter subunit ; periplasmic-binding component of ABC superfamily [Cupriavidus metallidurans CH34] Length = 303 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 64/277 (23%), Positives = 122/277 (44%), Gaps = 18/277 (6%) Query: 19 SFSTNASIL-GDIKK---RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 + + +A++L G +KK G L G + F+ + G+ +D C + A ++ Sbjct: 25 AVAQDATVLSGTLKKAKDTGTLVIGYRESSLPFSYLNQASRPIGYSIDICTEIVQAASEE 84 Query: 75 PSK---IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131 + ++++P+ ++ RF A+ S +ID+ +T R ++ AF P+ + G ++ Sbjct: 85 VGRELAVKWVPVTSENRFEAITSGKIDLECGSTTRNAERMQTV--AFSPVIFIAGTKLMV 142 Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191 + I S L G ++ V AGTT E +A K ++ + I + A Sbjct: 143 PRASPIKSFRDLKGKTVVVTAGTTNEQAVAQLSKRFDLNINLIRVRDHADAFAVLSRGGA 202 Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 DAY GD LY + +I D IS P + + D ++ +V ++T+ Sbjct: 203 DAYAGDDVLLYGFLAHYGAGKKFIITRDFISYDPYGIMLRKNDPQFATLVGKAVRDVITS 262 Query: 252 EELGITQKN--INQVSKDTTNPDVQRFLGIDKSSNIG 286 ++ K +N++ P +R LGI S+ +G Sbjct: 263 GDMERLYKQWFMNKL------PTGER-LGIPMSAELG 292 >gi|4588485|gb|AAD26123.1| antigenic protein [Actinobacillus pleuropneumoniae] Length = 278 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 53/223 (23%), Positives = 105/223 (47%), Gaps = 10/223 (4%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 ST + IK++G ++ G+ F V ANG +GFDV+ + +++ + K+++ Sbjct: 32 STAKDSVAQIKEKGVIRIGVFGDKPPFGYVDANGKSQGFDVEIAKEIANDLLGSSDKVEF 91 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD-GQGFIMHKKKGISS 139 + A R L+S ++D++ N T R + A Y + G + K + IS Sbjct: 92 VLTEAANRVEYLKSNKVDLILANFTKTPERAEVVDFA---APYMNVALGVVSPKVRLISD 148 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + QL G ++ V GTT + YF ++ + + + F++ E A + R A D + Sbjct: 149 LKQLEGKTLLVNKGTTADA----YFTKNHPEINLLKFDQNTETFDALKDGRGVALAHDNA 204 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 ++A N P+ V + + +APA+ +G+ ++++ Sbjct: 205 LVWAWAKEN--PTFDVAIGSVGPAEQIAPAVQKGNQALLDVIN 245 >gi|213156960|ref|YP_002319005.1| ABC transporter, periplasmic binding protein [Acinetobacter baumannii AB0057] gi|301344841|ref|ZP_07225582.1| ABC transporter, periplasmic binding protein [Acinetobacter baumannii AB056] gi|301596930|ref|ZP_07241938.1| ABC transporter, periplasmic binding protein [Acinetobacter baumannii AB059] gi|213056120|gb|ACJ41022.1| ABC transporter, periplasmic binding protein [Acinetobacter baumannii AB0057] Length = 288 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 64/255 (25%), Positives = 115/255 (45%), Gaps = 23/255 (9%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S + IKK G ++ G+ + F + A G +GFDV+ + ++ + D +K++++ Sbjct: 43 SSIEQIKKNGVVRIGVFSDKPPFGYLDAQGKNQGFDVEIAKHIAKDLLGDENKVEFVLTE 102 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 A L++ ++DI+ N T R+ + A +P G + K I+ V+QL Sbjct: 103 AANLVEYLKANKVDIIFANFTVTPERKEVVDFA-KPYLKV-ALGVVSPKSHPITDVAQLK 160 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIV----FERVEEIDAAYRAHRCDAYTGDISA 200 ++ V GTT AD F K HP + +E+ E A + R A D Sbjct: 161 DKTLLVNKGTT-----ADSF---FTKTHPEIKLQKYEQNTETFDALKDGRGTALAHD--N 210 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT--- 257 L L + P+ V + ++ + +APA+ +GD E ++ W + + + G+ Sbjct: 211 LLVLAWAKENPNYTVGITNLGEQDLIAPAVKKGDKE---LLDWLNQDLEKLAKEGVIHQA 267 Query: 258 -QKNINQVSKDTTNP 271 +K + V DT NP Sbjct: 268 YEKTLKPVYGDTINP 282 >gi|300782280|ref|YP_003762571.1| ABC transporter substrate-binding protein [Amycolatopsis mediterranei U32] gi|299791794|gb|ADJ42169.1| ABC transport system substrate-binding protein [Amycolatopsis mediterranei U32] Length = 314 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 9/156 (5%) Query: 12 LIILFFTSFST---NASILGDIKKRGFLKCGIN--TGLVGFAEVKANGDWKGFDVDFCRA 66 L L S ST ++S + DI+KRG L G++ T L GF +G+ +GFD+D A Sbjct: 53 LASLVPASSSTTVPDSSTMSDIRKRGKLIAGVDQTTYLFGFRN-PTSGNLEGFDIDMVNA 111 Query: 67 LSSAIFDDP-SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ AIF +Q+ + + +R L+ Q+DI+ R T R+ + F + Y Sbjct: 112 VAKAIFGSADGHVQFRAIPSSQREEVLKKHQVDIVVRTYSITCARKKDV--EFSSVYYVA 169 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 GQ ++ K+ +S LSG +C +T+ +A Sbjct: 170 GQKILVPKESKAQKLSDLSGKRVCATKKSTSLAKIA 205 >gi|229590085|ref|YP_002872204.1| putative ABC-type amino-acid transporter periplasmic solute-binding protein [Pseudomonas fluorescens SBW25] gi|229361951|emb|CAY48851.1| putative ABC-type amino-acid transporter periplasmic solute-binding protein [Pseudomonas fluorescens SBW25] Length = 282 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 58/263 (22%), Positives = 110/263 (41%), Gaps = 11/263 (4%) Query: 8 SILCLIILFFTSFSTNASI-------LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 S+ + F + ++ AS+ L D+ KRG L G + + A+G +GFD Sbjct: 6 SVFKACVFLFAASASLASVVQAADSKLDDVLKRGHLIVGTGSTNAPWHFQGADGKLQGFD 65 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D R ++ +F+DPSK++++ ++ R L + ++D+ + T R + +AF Sbjct: 66 IDIGRIVAKGLFNDPSKVEFVVQSSDARIPNLLTDKVDMSCQFITVTASR--AQQVAFTL 123 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y +G G ++ + L A V + + K ++ V+ Sbjct: 124 PYYREGVGLLLPNNSKYKEIEDLQAAGDGVTVAVLQNVYAEELVHQALPKAKVDQYDSVD 183 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A + R DA D S++ L + N P + S A A+ +GD +W N Sbjct: 184 LMYQAVNSGRADAAATDQSSVKYLMVQN--PGRYRSPAYAWSPQTYACAVKRGDQDWLNF 241 Query: 241 VSWTHYAMVTAEELGITQKNINQ 263 V+ + +T E + + Q Sbjct: 242 VNTALHEAMTGVEFPTYKASFKQ 264 >gi|118475479|ref|YP_892322.1| bifunctional adhesin/ABC transporter aspartate/glutamate-binding protein [Campylobacter fetus subsp. fetus 82-40] gi|118414705|gb|ABK83125.1| glutamine-binding protein [Campylobacter fetus subsp. fetus 82-40] Length = 264 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 50/196 (25%), Positives = 90/196 (45%), Gaps = 11/196 (5%) Query: 15 LFFTSFSTNASI--------LGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCR 65 L F + S+N S L +IK +G G+ + GF + K G +GF++D + Sbjct: 15 LVFAACSSNTSSDSKEANSNLENIKSKGIFTAGVKDDVPGFGLLNKQTGKIEGFEIDIAK 74 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 LS I D +K++ + + AK R L + +D + +T+ E + Y D Sbjct: 75 LLSKHILGDENKVKLVSVTAKTRGPMLDNSTLDAVIAT--FTITDERKKTYDYTTPYYKD 132 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 G ++ K G++++ L G +I V +T++ ++ + K ++ + I AA Sbjct: 133 AVGLLVRKDGGVNTLKDLEGGTIGVSMSSTSKKSILEAAKNLGIELKFNEYPDYPSIKAA 192 Query: 186 YRAHRCDAYTGDISAL 201 A R DA++ D S L Sbjct: 193 LDAKRIDAFSVDKSIL 208 >gi|327459027|gb|EGF05375.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK1057] Length = 291 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 58/221 (26%), Positives = 103/221 (46%), Gaps = 21/221 (9%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L +IKK G L+ + + F V NG ++G+D+ L+ + P +Y+P++A Sbjct: 46 LEEIKKSGKLRIAVFSDKKPFGYVDNNGKYQGYDIYLGDQLAKDLGVKP---EYVPVDAA 102 Query: 87 ERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 R L S ++DI N T R ++ L + ++ G + K I+ QL Sbjct: 103 NRAEYLISNKVDITLANFTVTDERKKQVDFALPYMKVSL----GVVSPKGSVITKPEQLE 158 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA---HRCDAYTGDISAL 201 G ++ + GTT E YF+ + Y I ++ ++ AY+A R DA++ D + + Sbjct: 159 GKTLIITKGTTAET----YFEKN---YPNIKLQKYDQYSDAYQALLDGRGDAFSTDNTEV 211 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A L N V + + +APA+ +G+TE N ++ Sbjct: 212 LAWALEN--KGFEVGITSLGDPDTIAPAVQKGNTELLNYIN 250 >gi|295702498|ref|YP_003595573.1| glutamine ABC transporter glutamine-binding protein GlnH [Bacillus megaterium DSM 319] gi|294800157|gb|ADF37223.1| glutamine ABC transporter, glutamine-binding protein GlnH [Bacillus megaterium DSM 319] Length = 271 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 59/226 (26%), Positives = 103/226 (45%), Gaps = 15/226 (6%) Query: 21 STNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 S L +IK RG + G+ +T L G K G+ +GFDVD + L+ I D +K+ Sbjct: 35 SAKKDALTEIKDRGKIVIGVKNDTRLFGLKNPK-TGEVEGFDVDISKQLAKEILGDENKV 93 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 ++ + +K R LQ ID + T+ E + F + + GQ ++ K I Sbjct: 94 EFKEVTSKTRVPLLQKGDIDAVVAT--MTITDERKKEVDFTDVYFQAGQSLLVKKGSKIK 151 Query: 139 SVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 SV L G + G+T+ + + + + + FE E A ++ + DA T D Sbjct: 152 SVDDLKKGTKVLAVKGSTSAINIREKAPETTV----LEFENYAEAFTALKSKQGDALTTD 207 Query: 198 ISALYALKLTNDRPS-EHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + LY + ++ PS E V P ++ P A+ +G+ E + ++ Sbjct: 208 DAILYG--MADEDPSYELVGKP--FTEEPYGIAVKKGNKELVDALN 249 >gi|68535318|ref|YP_250023.1| putative extracellular solute-binding protein [Corynebacterium jeikeium K411] gi|260578467|ref|ZP_05846381.1| ABC superfamily ATP binding cassette transporter, binding protein [Corynebacterium jeikeium ATCC 43734] gi|68262917|emb|CAI36405.1| putative extracellular solute-binding protein [Corynebacterium jeikeium K411] gi|258603489|gb|EEW16752.1| ABC superfamily ATP binding cassette transporter, binding protein [Corynebacterium jeikeium ATCC 43734] Length = 361 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 40/136 (29%), Positives = 71/136 (52%), Gaps = 5/136 (3%) Query: 30 IKKRGFLKCGINTGL--VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 I +RG L G+ L +GF + +GD GF+VD R ++ IF DP++I++ + ++E Sbjct: 97 IMRRGRLVVGVAQSLNRLGFRD-PVSGDVAGFEVDLAREIARDIFGDPNRIEFRYVESRE 155 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 R AL+S +DI+ R TL R+ L + P + ++ + I S + L + Sbjct: 156 RAEALKSGDVDIVVRTMSPTLSRQSKLEFSI-PYLQVHSRLLVLSDSQ-IESFNDLHNKT 213 Query: 148 ICVQAGTTTELTLADY 163 +CV +T+ + + Y Sbjct: 214 VCVTRDSTSAVRVKQY 229 >gi|294497132|ref|YP_003560832.1| glutamine ABC transporter glutamine-binding protein GlnH [Bacillus megaterium QM B1551] gi|294347069|gb|ADE67398.1| glutamine ABC transporter, glutamine-binding protein GlnH [Bacillus megaterium QM B1551] Length = 271 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 59/223 (26%), Positives = 101/223 (45%), Gaps = 15/223 (6%) Query: 21 STNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 S L +IK RG + G+ +T L G K G+ +GFDVD + L+ I D +K+ Sbjct: 35 SAKKDALTEIKDRGKIVIGVKNDTRLFGLKNPK-TGEVEGFDVDISKQLAKEILGDENKV 93 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 ++ + +K R LQ ID + T+ E + F + + GQ ++ K I Sbjct: 94 EFKEVTSKTRVPLLQKGDIDAVVAT--MTITDERKKEVDFTDVYFQAGQSLLVKKGSKIK 151 Query: 139 SVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 SV L G + G+T+ + + + + + FE E A ++ + DA T D Sbjct: 152 SVDDLKKGTKVLAVKGSTSAINIREKAPETTV----LEFENYAEAFTALKSKQGDALTTD 207 Query: 198 ISALYALKLTNDRPS-EHVILPDIISKSPLAPAIIQGDTEWYN 239 + LY + ++ PS E V P ++ P A+ +G+ E + Sbjct: 208 DAILYG--MADEDPSYELVGKP--FTEEPYGIAVKKGNKELVD 246 >gi|150018984|ref|YP_001311238.1| extracellular solute-binding protein [Clostridium beijerinckii NCIMB 8052] gi|149905449|gb|ABR36282.1| extracellular solute-binding protein, family 3 [Clostridium beijerinckii NCIMB 8052] Length = 270 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 52/195 (26%), Positives = 87/195 (44%), Gaps = 10/195 (5%) Query: 30 IKKRGFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 IK RG LK G+ + + + G+ +G ++D +A++ I D SK+++ + AK R Sbjct: 42 IKDRGVLKVGVKVDVPKYGYKNPQTGEMEGLEIDLSKAIAKKILGDESKVEFQGVTAKTR 101 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 L + +ID+++ +T+ E F DG G ++ K G SS+ L G +I Sbjct: 102 GPLLDNGEIDMVAAT--FTITDERKKSYNFSDPYIKDGVGLLVKKSLGASSLKDLDGKTI 159 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY-----A 203 V TT+ L + + E+ AA + R D + D S L + Sbjct: 160 GVAQSATTKTALQKEAEKEGITLKFSELGGYPELKAALDSGRIDCFAVDASILNGYVDDS 219 Query: 204 LKLTNDR--PSEHVI 216 + NDR P E+ I Sbjct: 220 TVILNDRYDPQEYGI 234 >gi|270292247|ref|ZP_06198461.1| CjaA protein [Streptococcus sp. M143] gi|270279293|gb|EFA25136.1| CjaA protein [Streptococcus sp. M143] Length = 288 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 59/228 (25%), Positives = 106/228 (46%), Gaps = 23/228 (10%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + A + +IKK G L+ + F V +G ++G+D++ L+ D K++Y Sbjct: 37 TAKARTIDEIKKSGELRIAVFGDKKPFGYVDNDGSYQGYDIELGNQLAQ---DLGVKVKY 93 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKKGIS 138 + ++A R L S ++DI N T R ++ L + ++ G + K K I Sbjct: 94 VSVDAANRAEYLISNKVDITLANFTVTDERKKQVDFALPYMKVSL----GVVSPKDKVIK 149 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV-FERVEEIDAAYRA---HRCDAY 194 V +L G ++ V GTT E YF+ K HP V ++ ++ AY+A R DA+ Sbjct: 150 DVKELEGKTLIVTKGTTAET----YFE----KNHPEVKLQKYDQYSDAYQALLDGRGDAF 201 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + D + + A L N V + + +APA+ +G+ E + ++ Sbjct: 202 STDNTEVLAWALEN--KGYEVGITSLGDPDTIAPAVQKGNQELLDFIN 247 >gi|305431997|ref|ZP_07401164.1| ABC superfamily ATP binding cassette transporter, binding protein [Campylobacter coli JV20] gi|304445081|gb|EFM37727.1| ABC superfamily ATP binding cassette transporter, binding protein [Campylobacter coli JV20] Length = 279 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 56/247 (22%), Positives = 108/247 (43%), Gaps = 18/247 (7%) Query: 3 KDFFVSILCLIILFF------TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 K +SI + F S S ++ L IK+ G ++ G+ F V G Sbjct: 2 KKMLLSIFTTFVAVFLAACGGNSDSGASNSLERIKQDGVVRIGVFGDKPPFGYVDEKGVN 61 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR--EISL 114 +G+D+ + ++ + D +K+Q++ + A R L+S ++DI+ N T R ++ Sbjct: 62 QGYDIVLAKRIAKELLGDENKVQFVLVEAANRVEFLKSNKVDIILANFTQTPERAEQVDF 121 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 L + + G + + ISS+ L ++ + GTT + YF + Sbjct: 122 CLPYMKVAL----GVAVPQDSNISSIEDLKDKTLLLNKGTTADA----YFTKEYPDIKTL 173 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +++ E AA R DA + D + L+A + P + + ++ +K +APA+ +GD Sbjct: 174 KYDQNTETFAALIDQRGDALSHDNTLLFA--WVKEHPEFKMAIKELGNKDVIAPAVKKGD 231 Query: 235 TEWYNIV 241 E + Sbjct: 232 KELKEFI 238 >gi|121393|sp|P27676|GLNH_BACST RecName: Full=Glutamine-binding protein; Short=GlnBP; Flags: Precursor gi|142989|gb|AAA22484.1| glutamine-binding protein [Geobacillus stearothermophilus] Length = 262 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 11/210 (5%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPS 76 T S + L IKKRG L G+ L F + G +GFD+D + L+ I D + Sbjct: 43 TETSAGTNTLEKIKKRGKLIVGVKYDLNLFGLKNPETGKVEGFDIDIAKGLAKKILGDEN 102 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 KI+ + +K R L + +ID + T+ E + F + + GQ ++ K Sbjct: 103 KIELKEVTSKTRIPMLNNGEIDAIIGT--MTITEERKKEVDFSDVYFMAGQSLLVKKDSK 160 Query: 137 ISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I+SV L G ++ G+T+ A + + + + FE E A +A + DA T Sbjct: 161 INSVKDLKKGMTVLTAKGSTS----AQNIRKVAPEVNVLEFENYAEAFTALKAGQGDALT 216 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSP 225 D + L+ + + + +L + SK P Sbjct: 217 TDNALLWGMA---KQDPNYRVLDETFSKEP 243 >gi|253581218|ref|ZP_04858475.1| extracellular solute-binding protein family 3 [Ruminococcus sp. 5_1_39B_FAA] gi|251847495|gb|EES75468.1| extracellular solute-binding protein family 3 [Ruminococcus sp. 5_1_39BFAA] Length = 330 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 58/225 (25%), Positives = 99/225 (44%), Gaps = 14/225 (6%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + A L +IKK G +K G+ + F V NGD +G+D+ F + L+ + ++ Sbjct: 35 TAQARTLDEIKKDGKIKIGVFSDKNPFGYVDENGDVQGYDIYFGKRLAKDLLGSEDDAEF 94 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKKGIS 138 + A R LQS ++D++ N T R ++ L + + G + I Sbjct: 95 TYVEAASRVEYLQSAKVDVILANFTVTDDRAEKVDFALPYMKVAL----GVVSPDDALIK 150 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 V L G + V GTT E YF + + F+ +E A R DA++ D Sbjct: 151 DVKDLEGKKLIVVKGTTAET----YFTDNYPDIELVKFDEYQEAYDALLDGRGDAFSTDN 206 Query: 199 SALYALKLTNDRPSEHV-ILPDIISKSPLAPAIIQGDTEWYNIVS 242 + + A N+ S + L DI +APA+ +G+T+ N ++ Sbjct: 207 TEVLAWAQQNEGFSVGIESLGDI---DTIAPAVQKGNTDLLNAIN 248 >gi|152974368|ref|YP_001373885.1| extracellular solute-binding protein [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152023120|gb|ABS20890.1| extracellular solute-binding protein family 3 [Bacillus cytotoxicus NVH 391-98] Length = 275 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 54/219 (24%), Positives = 97/219 (44%), Gaps = 13/219 (5%) Query: 21 STNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 ST+ ++ IKKRG L G+ +T L G + G +GFDVD +AL+ I D K+ Sbjct: 35 STSGGVVEQIKKRGKLVVGVKNDTNLFGLKN-PSTGQVEGFDVDMAKALAKRILGDEKKL 93 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + + +K R L++ ID + T+ E + F + + GQ ++ K I Sbjct: 94 ELKEVTSKTRIPMLKNGDIDAIIAT--MTITEERKKEVDFSDVYFKAGQSLLVKKGSDIK 151 Query: 139 SVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 S+ + G + G+T+ + + + FE E A +A + D T D Sbjct: 152 SIDDVKKGVKVLAVKGSTS----TQNVRQKAPEATVLEFENYSEAFTALKAGQGDVLTTD 207 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + LY + + + + ++ I + P A+ +G T+ Sbjct: 208 NAILYGMA---KQDANYEVVGKIFTNEPYGIAVQKGATD 243 >gi|300780393|ref|ZP_07090249.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Corynebacterium genitalium ATCC 33030] gi|300534503|gb|EFK55562.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Corynebacterium genitalium ATCC 33030] Length = 339 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 41/129 (31%), Positives = 67/129 (51%), Gaps = 7/129 (5%) Query: 29 DIKKRGFLKCGINTG--LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 DI KRG L G++ L+ F + A G+ +GF+VD R ++ IF DP K+ + + + Sbjct: 81 DIVKRGRLIVGVDQSQYLLSFRD-NATGELRGFEVDLAREIARDIFGDPDKVDFRFVEST 139 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ-GFIMHKKKGISSVSQLSG 145 R ALQS Q+D++ R ++ RE + + F + Y D ++ GI SV + Sbjct: 140 MRTEALQSGQVDVVIRT--MSITRERAEKVDFS-VPYLDSSVRMLVPAASGIESVEDVGD 196 Query: 146 ASICVQAGT 154 +CV G+ Sbjct: 197 ERVCVADGS 205 >gi|296156268|ref|ZP_06839107.1| extracellular solute-binding protein family 3 [Burkholderia sp. Ch1-1] gi|295893774|gb|EFG73553.1| extracellular solute-binding protein family 3 [Burkholderia sp. Ch1-1] Length = 272 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 63/232 (27%), Positives = 100/232 (43%), Gaps = 13/232 (5%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72 L S + +A L DIKK G L+ + GF + K+N G D+D+ RA+++ + Sbjct: 14 LLVMSAAAHADRLDDIKKAGVLRVAAFDSNPPFGFVDPKSN-QIVGLDIDYARAVANRLG 72 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 K++ P N R L+S ++D++ N T R+ + + I YF + Sbjct: 73 ---VKLEIQPTNPANRIAFLKSGKVDLVFANFTITDDRKKEVDFS---IPYFASGTQFIA 126 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 KK ++S QL+G I GTT E + F + I ++ AA R Sbjct: 127 KKGTLTSPQQLNGLRIGADKGTTNEQQVRAQFPGATI----IAYDDTPFAFAALRTGNVQ 182 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 A T D L AL + + I P IS + +G+T N+V+ T Sbjct: 183 AITQDGPKLVALLAKVPDKANYEIPPFTISNDYEGVGVPKGETRLLNVVNDT 234 >gi|57168852|ref|ZP_00367982.1| ABC transporter, periplasmic substrate-binding protein [Campylobacter coli RM2228] gi|57019688|gb|EAL56374.1| ABC transporter, periplasmic substrate-binding protein [Campylobacter coli RM2228] Length = 279 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 56/247 (22%), Positives = 108/247 (43%), Gaps = 18/247 (7%) Query: 3 KDFFVSILCLIILFF------TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 K +SI + F S S ++ L IK+ G ++ G+ F V G Sbjct: 2 KKMLLSIFTTFVAVFLAACGGNSDSGASNSLERIKQDGVVRIGVFGDKPPFGYVDEKGVN 61 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR--EISL 114 +G+D+ + ++ + D +K+Q++ + A R L+S ++DI+ N T R ++ Sbjct: 62 QGYDIVLAKRIAKELLGDENKVQFVLVEAANRVEFLKSNKVDIILANFTQTPERAEQVDF 121 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 L + + G + + ISS+ L ++ + GTT + YF + Sbjct: 122 CLPYMKVAL----GVAVPQDSNISSIEDLKDKTLLLNKGTTADA----YFTKEYPDIKTL 173 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +++ E AA R DA + D + L+A + P + + ++ +K +APA+ +GD Sbjct: 174 KYDQNTETFAALIDQRGDALSHDNTLLFA--WVKEHPEFKMAIKELGNKDVIAPAVKKGD 231 Query: 235 TEWYNIV 241 E + Sbjct: 232 KELKEFI 238 >gi|322386066|ref|ZP_08059705.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus cristatus ATCC 51100] gi|321269910|gb|EFX52831.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus cristatus ATCC 51100] Length = 288 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 60/228 (26%), Positives = 106/228 (46%), Gaps = 23/228 (10%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + A + +IKK G L+ + F V +G ++G+D++ L+ D K +Y Sbjct: 37 TAKARTIDEIKKSGELRIAVFGDKKPFGYVDNDGSYQGYDIELGNQLAK---DLGVKAKY 93 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKKGIS 138 + ++A R L S ++DI N T R ++ L + ++ G + KK I+ Sbjct: 94 VSVDAANRAEYLISNKVDITLANFTVTDERKKQVDFALPYMKVSL----GVVSPKKGVIT 149 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV-FERVEEIDAAYRA---HRCDAY 194 V QL G ++ V GTT E YF+ K HP V ++ ++ AY+A R DA+ Sbjct: 150 DVKQLEGKTLIVTKGTTAET----YFE----KNHPEVKLQKYDQYSDAYQALLDGRGDAF 201 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + D + + A L N V + + +APA+ +G+ E + ++ Sbjct: 202 STDNTEVLAWALEN--KGYEVGISSLGDPDTIAPAVQKGNKELLDFIN 247 >gi|317153612|ref|YP_004121660.1| family 3 extracellular solute-binding protein [Desulfovibrio aespoeensis Aspo-2] gi|316943863|gb|ADU62914.1| extracellular solute-binding protein family 3 [Desulfovibrio aespoeensis Aspo-2] Length = 274 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 59/246 (23%), Positives = 108/246 (43%), Gaps = 13/246 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGI-NTGLVGFAEVKANGDWKGFDVDFCR 65 +S+L +++ + + + +K G+ N G+ G + +W GFDVD Sbjct: 6 ISVLAALLVMAATVAFAGPTYDRVMSTKVVKAGMSNQGIPG-GFINDKNEWVGFDVDMAT 64 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ + K+ + N + F+ ++D++ N T RE + F +FD Sbjct: 65 EIAKRLGCTLEKV-VVNNNTRVSFVQTDPPKVDMVLANM--THKRERDQKIDFSITYFFD 121 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA-HNMKYHPIVFERVEEIDA 184 GQ F + KK + V L+G + GTT+ + +Y K N I ++ + Sbjct: 122 GQKF-LAKKGAVKDVKDLAGMKVGSMQGTTSIVNATEYLKKLGNPDPKVIGYDGEIAMFE 180 Query: 185 AYRAHRCDAYTGDISAL--YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A R+ R A + D + L YA K+ P + ++ D IS P + Q D+ W +I++ Sbjct: 181 ALRSGRVQAISTDSTILLGYAAKV----PGQFELVGDFISDEPYGIGLPQDDSAWRDIIN 236 Query: 243 WTHYAM 248 +T M Sbjct: 237 FTIQDM 242 >gi|1813949|emb|CAA71822.1| cjaA [Campylobacter jejuni] Length = 279 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 56/247 (22%), Positives = 108/247 (43%), Gaps = 18/247 (7%) Query: 3 KDFFVSILCLIILFF------TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 K +SI + F S S ++ L IK+ G ++ G+ F V G Sbjct: 2 KKMLLSIFTTFVAVFLAACGGNSDSGASNSLERIKQDGVVRIGVFGDKPPFGYVDEKGVN 61 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR--EISL 114 +G+D+ + ++ + D +K+Q++ + A R L+S ++DI+ N T R ++ Sbjct: 62 QGYDIVLAKRIAKELLGDENKVQFVLVEAANRVEFLKSNKVDIILANFTQTPERAEQVDF 121 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 L + + G + + ISS+ L ++ + GTT + YF + Sbjct: 122 CLPYMKVAL----GVAVPQDSNISSIEDLKDKTLLLNKGTTADA----YFTKEYPDIKTL 173 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +++ E AA R DA + D + L+A + P + + ++ +K +APA+ +GD Sbjct: 174 KYDQNTETFAALIDQRGDALSHDNTLLFA--WVKEHPEFKMAIKELGNKDVIAPAVKKGD 231 Query: 235 TEWYNIV 241 E + Sbjct: 232 KELKEFI 238 >gi|53728918|ref|ZP_00134502.2| COG0834: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126209158|ref|YP_001054383.1| antigenic protein, ABC transporter-like protein [Actinobacillus pleuropneumoniae L20] gi|190151024|ref|YP_001969549.1| antigenic protein, ABC transporter-like protein [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307264383|ref|ZP_07545970.1| hypothetical protein appser13_17750 [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|126097950|gb|ABN74778.1| antigenic protein, ABC transporter-like protein [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|189916155|gb|ACE62407.1| antigenic protein, ABC transporter-like protein [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306870270|gb|EFN02027.1| hypothetical protein appser13_17750 [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 278 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 53/223 (23%), Positives = 104/223 (46%), Gaps = 10/223 (4%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 ST + IK++G ++ G+ F V ANG +GFDV+ + +++ + K+++ Sbjct: 32 STAKDSVAQIKEKGVIRIGVFGDKPPFGYVDANGKSQGFDVEIAKEIANDLLGSSDKVEF 91 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD-GQGFIMHKKKGISS 139 + A R L+S ++D++ N T R + A Y + G + K IS Sbjct: 92 VLTEAANRVEYLKSNKVDLILANFTKTPERAEVVDFA---APYMNVALGVVSPKGALISD 148 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + QL G ++ V GTT + YF ++ + + + F++ E A + R A D + Sbjct: 149 LKQLEGKTLLVNKGTTADA----YFTKNHPEINLLKFDQNTETFDALKDGRGVALAHDNA 204 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 ++A N P+ V + + +APA+ +G+ ++++ Sbjct: 205 LVWAWAKEN--PTFDVAIGSVGPAEQIAPAVQKGNQALLDVIN 245 >gi|73542047|ref|YP_296567.1| extracellular solute-binding protein [Ralstonia eutropha JMP134] gi|72119460|gb|AAZ61723.1| extracellular solute-binding protein, family 3 [Ralstonia eutropha JMP134] Length = 311 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 56/232 (24%), Positives = 103/232 (44%), Gaps = 7/232 (3%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD---PS-KIQYL 81 +L I++ G ++ V F+ V A+G G+ VD C ++ A+ P +++++ Sbjct: 42 VLNHIQQTGVIRIAHRESSVPFSFV-ADGKPVGYAVDLCLKIADAVRTSLHLPGLRVEWV 100 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 P+ R A+ + D+ +T T RE +AF Y G I+ GIS + Sbjct: 101 PVTPANRIPAIVEGKADLECGST--TNNRERREQVAFTIPHYIAGSRMIVKTDSGISKWA 158 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L G ++ +GTT L + M++ + + + A A + DA+ D L Sbjct: 159 DLRGKTVVSTSGTTPLAMLRKMDEGKVMQWRLVEAKDHAQAFAMVEAGKADAFVMDDVLL 218 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 Y L+ RP + + ++++ P A + + D E+ +V T A V +E Sbjct: 219 YGLRANASRPGDFKVTGEMLTIEPYAIMLSKSDPEFKKLVDKTLIAAVYDQE 270 >gi|329118220|ref|ZP_08246930.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Neisseria bacilliformis ATCC BAA-1200] gi|327465641|gb|EGF11916.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Neisseria bacilliformis ATCC BAA-1200] Length = 321 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 63/249 (25%), Positives = 109/249 (43%), Gaps = 19/249 (7%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 IK++G ++ G+ F V + G +GFDV+ + ++ + P K++++ A R Sbjct: 81 IKEKGVIRIGVFGDKPPFGYVDSQGKNQGFDVEIAKEMAKDLLGSPDKVEFVLTEAANRV 140 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD-GQGFIMHKKKGISSVSQLSGASI 148 +S ++D++ N T R ++ A Y G + KK ++ ++QL ++ Sbjct: 141 EYARSGKVDLVLANFTQTPERAEAVDFA---APYMKVALGVVSPDKKPVTDIAQLKDQTL 197 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIV----FERVEEIDAAYRAHRCDAYTGDISALYAL 204 V GTT AD F + N HP V F++ E A + R A D + L+A Sbjct: 198 LVNKGTT-----ADAFFSKN---HPEVKLLKFDQNTETFDALKDGRGVALAHDNALLWAW 249 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT-QKNINQ 263 N P V + +I +APA+ +GD + V+ AM L +K + Sbjct: 250 AKEN--PGYEVAIGNIGPAEVIAPAVKKGDKALLDWVNAEIAAMKKDGRLKAAYEKTLKP 307 Query: 264 VSKDTTNPD 272 V D P+ Sbjct: 308 VYGDKVKPE 316 >gi|148926602|ref|ZP_01810284.1| probable ABC-type amino-acid transporter periplasmic solute-binding protein [Campylobacter jejuni subsp. jejuni CG8486] gi|145845296|gb|EDK22390.1| probable ABC-type amino-acid transporter periplasmic solute-binding protein [Campylobacter jejuni subsp. jejuni CG8486] Length = 264 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 8/204 (3%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDP 75 F++ + L IK +G L G+ + +A + +A G+ KGF+VD + L+ I D Sbjct: 26 FSNANAAEGKLESIKSKGQLIVGVKNDVPHYALLDQATGEIKGFEVDVAKLLAKNILGDD 85 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 KI+ + +NAK R L + +D + +T+ E F Y D G ++ K+K Sbjct: 86 KKIKLVAVNAKTRGPLLDNGSVDAVIAT--FTITPERKRIYNFSEPYYQDAIGLLVLKEK 143 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 S++ + GA+I V TT+ + K + F I AA A R DA++ Sbjct: 144 NYKSLADMKGANIGVAQAATTKKAIGKAAKKIGIDVKFSEFPDYPSIKAALDAKRVDAFS 203 Query: 196 GDISALYALKLTNDRPSEHVILPD 219 D S L L +D+ ILPD Sbjct: 204 VDKSIL--LGYVDDKSE---ILPD 222 >gi|307152951|ref|YP_003888335.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7822] gi|306983179|gb|ADN15060.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7822] Length = 298 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 60/271 (22%), Positives = 116/271 (42%), Gaps = 17/271 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 MYK ++ + L++ + + A +L I++ G + G + F V G W G+ Sbjct: 1 MYKQLAITAITLLLTITSQTPSLAGRVLDKIRQTGVITAGARKDAIPFGYVNEKGQWVGY 60 Query: 60 DVD---FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +D R + P K+Q + + + RF ++ + IDI +T T R+ + Sbjct: 61 SLDILELIRQQTEKQLGKPIKLQLVEVTPENRFAKIKDQSIDIECGSTTVTWARDKEVDF 120 Query: 117 AFRPITYF-DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + ++YF G ++ K + ++ L+G I V TT E + A + Sbjct: 121 S---VSYFASGTQLLVKKGSNLGTIESLAGMKIGVIPNTTNERAIKLQQPAAQLVTVKDR 177 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI-ISKSPLAPAIIQGD 234 FE +++++ D + D L LK T + I+P+ A I Q + Sbjct: 178 FEGLQKLEKG----EIDGFASDGIVLQGLKRTVKNGNSLEIVPEYPYMYESYACVIPQDE 233 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 ++W ++V +Y++V E GI ++ V+ Sbjct: 234 SQWRDLV---NYSLVQYME-GIVSDQMSSVA 260 >gi|325970438|ref|YP_004246629.1| ABC transporter periplasmic protein [Spirochaeta sp. Buddy] gi|324025676|gb|ADY12435.1| ABC-type transporter, periplasmic subunit family 3 [Spirochaeta sp. Buddy] Length = 265 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 53/219 (24%), Positives = 96/219 (43%), Gaps = 8/219 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L +K +G+L G + F N G+ +GF++D +A++ IF D + I+ P+ A Sbjct: 34 LAALKAKGYLSVGCKVDVPSFGYKNINTGEIEGFEIDLAKAVAKRIFGDENAIKLTPVTA 93 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 K R L + ++D+++ +T+ E F I Y D ++ K + S L+G Sbjct: 94 KTRGPLLDTGELDMVAAT--FTVTEERRKSWDFSTIYYVDAVAVMVKKASPYAVFSDLAG 151 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 +I V TT+ +L + F EI A + R DA++ D + L Sbjct: 152 KTIGVAQSATTKKSLEAGAAEAGITLKFNEFATYPEIKVALDSGRVDAFSVDFAILNGYM 211 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + + +L + +K A+ +G+T V+ T Sbjct: 212 EDSTK-----LLTERFAKQDYGIAVKKGNTALLEAVNAT 245 >gi|315612794|ref|ZP_07887705.1| ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis ATCC 49296] gi|315314904|gb|EFU62945.1| ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis ATCC 49296] Length = 288 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 59/228 (25%), Positives = 106/228 (46%), Gaps = 23/228 (10%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + A + +IKK G L+ + F V +G ++G+D++ L+ D K++Y Sbjct: 37 TAKARTIDEIKKSGELRIAVFGDKKPFGYVDNDGSYQGYDIELGNQLAQ---DLGVKVKY 93 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKKGIS 138 + ++A R L S ++DI N T R ++ L + ++ G + K K I Sbjct: 94 VSVDAANRAEYLISNKVDITLANFTVTDERKKQVDFALPYMKVSL----GVVSPKDKVIK 149 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV-FERVEEIDAAYRA---HRCDAY 194 V +L G ++ V GTT E YF+ K HP V ++ ++ AY+A R DA+ Sbjct: 150 DVKELEGKTLIVTKGTTAET----YFE----KNHPEVKLQKYDQYSDAYQALLDGRGDAF 201 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + D + + A L N V + + +APA+ +G+ E + ++ Sbjct: 202 STDNTEVLAWALEN--KGYEVGISSLGDPDTIAPAVQKGNQELLDYIN 247 >gi|239620790|ref|ZP_04663821.1| ABC-type amino acid transport/signal transduction system [Bifidobacterium longum subsp. infantis CCUG 52486] gi|239516366|gb|EEQ56233.1| ABC-type amino acid transport/signal transduction system [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 300 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 64/232 (27%), Positives = 109/232 (46%), Gaps = 23/232 (9%) Query: 18 TSFSTNASI--LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 TS S NA L +IKK G +K + + F V +G ++G+DV F L+ + +P Sbjct: 45 TSSSANAKARSLDEIKKSGKIKIAVFSDKAPFGYVDKDGKYQGYDVYFAEQLAKDLGVEP 104 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 +Y ++ R L S ++D++ N T R+ + A +P G + + Sbjct: 105 ---EYTSVDPAARVDVLTSNKVDLVLANFTVTDERKEKVDFA-KPYMKV-ALGVVSPESA 159 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFK--AHNMKYHPIVFERVEEIDAAYRA---HR 190 I+ VSQL G ++ + GTT E +F+ A N+K ++ ++ AY A R Sbjct: 160 QITDVSQLDGKTLIIAKGTTAET----WFEKNAPNVK-----LQKYDQYADAYNALLDGR 210 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 DA++ D + + A +N V + + +APA+ +GDTE N V+ Sbjct: 211 GDAFSTDNTEVLAWAKSN--KGFKVGITHLGDDDTIAPAVQKGDTELLNFVN 260 >gi|241663660|ref|YP_002982020.1| family 3 extracellular solute-binding protein [Ralstonia pickettii 12D] gi|240865687|gb|ACS63348.1| extracellular solute-binding protein family 3 [Ralstonia pickettii 12D] Length = 281 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 61/236 (25%), Positives = 105/236 (44%), Gaps = 15/236 (6%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVK--ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 + DIKK+G L CG+ F+ +K + + G+DVD C A++ ++ P Q L Sbjct: 31 VSDIKKKGELVCGVLGTDEPFSFLKDPMSREIVGYDVDMCDAIAKSLGVKPVLKQ---LA 87 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 R LQ ++D+L+ + RE + F T+ GQ ++ K GI+S++QL Sbjct: 88 VAARLPELQQGRVDLLAASLTHNKEREAQID--FSVSTFITGQKAMVKKSSGITSLAQLD 145 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA- 203 G + G+T E +A K ++ + F+ + A + + AY D + L Sbjct: 146 GKKLLTVKGSTMEANIAKTIKNADV----VSFDNSPQALLALQQGKGVAYVNDETTLIGN 201 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 + ++ +LP +S LA I +G+ + V M E+ G QK Sbjct: 202 MAKMGPAAKDYALLPQNLSTEHLALGIRKGEPAFKKQVDDVLLGM---EKSGEAQK 254 >gi|187929541|ref|YP_001900028.1| family 3 extracellular solute-binding protein [Ralstonia pickettii 12J] gi|309781684|ref|ZP_07676417.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Ralstonia sp. 5_7_47FAA] gi|187726431|gb|ACD27596.1| extracellular solute-binding protein family 3 [Ralstonia pickettii 12J] gi|308919325|gb|EFP64989.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Ralstonia sp. 5_7_47FAA] Length = 281 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 61/236 (25%), Positives = 105/236 (44%), Gaps = 15/236 (6%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVK--ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 + DIKK+G L CG+ F+ +K + + G+DVD C A++ ++ P Q L Sbjct: 31 VSDIKKKGELVCGVLGTDEPFSFLKDPMSREIVGYDVDMCDAIAKSLGVKPVLKQ---LA 87 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 R LQ ++D+L+ + RE + F T+ GQ ++ K GI+S++QL Sbjct: 88 VAARLPELQQGRVDLLAASLTHNKEREAQID--FSVSTFITGQKAMVKKSSGITSLAQLD 145 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA- 203 G + G+T E +A K ++ + F+ + A + + AY D + L Sbjct: 146 GKKLLTVKGSTMEANIAKTIKNADV----VSFDNSPQALLALQQGKGVAYVNDETTLIGN 201 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 + ++ +LP +S LA I +G+ + V M E+ G QK Sbjct: 202 MAKMGPAAKDYALLPQNLSTEHLALGIRKGEPAFKKQVDDVLLGM---EKSGEAQK 254 >gi|148983989|ref|ZP_01817308.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP3-BS71] gi|147924136|gb|EDK75248.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP3-BS71] gi|301799655|emb|CBW32215.1| putative glutamine-binding protein precursor [Streptococcus pneumoniae OXC141] Length = 254 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 49/180 (27%), Positives = 85/180 (47%), Gaps = 7/180 (3%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 N SI DI+KRG L G+ + F + G + G + D + ++ + KI Y+ Sbjct: 16 NTSI-ADIQKRGELVVGVKQDVPNFGYKDPKTGTYSGIETDLAKMVADEL---KVKIHYV 71 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 P+ A+ R L ++Q+D+ +T+ E F Y D GF+++K I + Sbjct: 72 PVTAQTRGPLLDNEQVDM--DIATFTITDERKKLYNFTSPYYTDASGFLVNKSAKIKKIE 129 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L+G +I V G+ T+ + + K +K+ + E+ + AHR DA++ D S L Sbjct: 130 DLNGKTIGVAQGSITQRLITELGKKKGLKFKFVELGSYPELITSLHAHRIDAFSVDRSIL 189 >gi|325689405|gb|EGD31410.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK115] Length = 291 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 59/230 (25%), Positives = 106/230 (46%), Gaps = 21/230 (9%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 +S + A L +IKK G L+ + + F V G ++G+D+ L+ + P Sbjct: 37 SSKTVKARSLEEIKKSGKLRIAVFSDKKPFGYVDNKGKYQGYDIYLGDQLAKDLGVKP-- 94 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKK 135 +Y+P++A R L S ++DI N T R ++ L + ++ G + K Sbjct: 95 -EYVPVDAANRAEYLISNKVDITLANFTVTDERKKQVDFALPYMKVSL----GVVSPKGS 149 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA---HRCD 192 I+ QL G ++ + GTT E YF+ + Y I ++ ++ AY+A R D Sbjct: 150 VITKPEQLEGKTLIITKGTTAET----YFEKN---YPNIKLQKYDQYSDAYQALLDGRGD 202 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A++ D + + A L N V + + +APA+ +G+TE N ++ Sbjct: 203 AFSTDNTEVLAWALEN--KGFEVGITSLGDPDTIAPAVQKGNTELLNYIN 250 >gi|149010773|ref|ZP_01832144.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP19-BS75] gi|147765254|gb|EDK72183.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP19-BS75] Length = 254 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 53/199 (26%), Positives = 96/199 (48%), Gaps = 13/199 (6%) Query: 27 LGDIKKRGFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 + DI+KRG L G+ + F + G + G + D + ++ + KI+Y+P+ A Sbjct: 19 IADIQKRGELVVGVKQDVPNFGYKDPKTGTYSGIETDLAKMVADEL---KVKIRYVPVTA 75 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 + R L ++Q+D+ +T+ E F Y D GF+++K I + L+G Sbjct: 76 QTRGPLLDNEQVDM--DIATFTITDERKKLYNFTSPYYTDASGFLVNKSAKIKKIEDLNG 133 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL--YA 203 +I V G+ T+ + + K +K+ + E+ + AHR DA++ D S L Y Sbjct: 134 KTIGVAQGSITQRLITELGKKKGLKFKFVELGSYPELITSLHAHRIDAFSVDRSILSGYT 193 Query: 204 LKLT---ND--RPSEHVIL 217 K T +D +PS++ I+ Sbjct: 194 SKRTALLDDSFKPSDYSIV 212 >gi|107028354|ref|YP_625449.1| extracellular solute-binding protein [Burkholderia cenocepacia AU 1054] gi|116686350|ref|YP_839597.1| extracellular solute-binding protein [Burkholderia cenocepacia HI2424] gi|105897518|gb|ABF80476.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia AU 1054] gi|116652065|gb|ABK12704.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia HI2424] Length = 313 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 54/233 (23%), Positives = 99/233 (42%), Gaps = 6/233 (2%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK---IQYLPL 83 L ++ G + G + F+ + A G+ ++ C+AL ++I D ++ I+++P+ Sbjct: 46 LAKVRGSGTIALGYRDASIPFSYLNARNQPIGYSIELCKALVASIEDAINQSLTIRWVPV 105 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 + R A+ S ++D+ +T L R+ + AF PI + G ++ + I S L Sbjct: 106 TSDNRIDAVVSGKVDLECGSTTSNLERQKRV--AFSPIFFVAGTKVMVKRGAPIRSFRDL 163 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 +G + V AGTT E L D + V + A DA+ D LY Sbjct: 164 AGKKVAVTAGTTNEKALRDLNDKFRLGVQLQVVPDHAQGFALVANGSADAFATDDVLLYG 223 Query: 204 LKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L N + ++ ++ D +S P + D + IV T + E+ Sbjct: 224 LIAENASKGGQYDVVGDFLSYDPYGIMFRKDDPQLAQIVKSTFQELAADGEIA 276 >gi|332077039|gb|EGI87501.1| major cell-binding factor [Streptococcus pneumoniae GA17545] Length = 254 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 53/199 (26%), Positives = 96/199 (48%), Gaps = 13/199 (6%) Query: 27 LGDIKKRGFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 + DI+KRG L G+ + F + G + G + D + ++ + KI+Y+P+ A Sbjct: 19 IADIQKRGELVVGVKQDVPNFGYKDPKTGTYSGIETDLAKMVADEL---KVKIRYVPVTA 75 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 + R L ++Q+D+ +T+ E F Y D GF+++K I + L+G Sbjct: 76 QTRGPLLDNEQVDM--DIATFTITDERKKLYNFTSPYYTDASGFLVNKSAKIKKIEDLNG 133 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL--YA 203 +I V G+ T+ + + K +K+ + E+ + AHR DA++ D S L Y Sbjct: 134 KTIGVAQGSITQRLITELGKKKGLKFKFVELGSYPELITSLHAHRIDAFSVDHSILSGYT 193 Query: 204 LKLT---ND--RPSEHVIL 217 K T +D +PS++ I+ Sbjct: 194 SKRTALLDDSFKPSDYSIV 212 >gi|327390344|gb|EGE88685.1| major cell-binding factor [Streptococcus pneumoniae GA04375] Length = 254 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 46/176 (26%), Positives = 84/176 (47%), Gaps = 6/176 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 + DI+KRG L G+ + F + G + G + D + ++ + KI+Y+P+ A Sbjct: 19 IADIQKRGELVVGVKQDVPNFGYKDPKTGTYSGIETDLAKMVADEL---KVKIRYVPVTA 75 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 + R L ++Q+D+ +T+ E F Y D GF+++K I + L+G Sbjct: 76 QTRGPLLDNEQVDM--DIATFTITDERKKLYNFTSPYYTDASGFLVNKSAKIKKIEDLNG 133 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 +I V G+ T+ + + K +K+ + E+ + AHR DA++ D S L Sbjct: 134 KTIGVAQGSITQRLITELGKKKGLKFKFVELGSYPELITSLHAHRIDAFSVDRSIL 189 >gi|170078777|ref|YP_001735415.1| glutamine-binding protein [Synechococcus sp. PCC 7002] gi|169886446|gb|ACB00160.1| glutamine-binding protein [Synechococcus sp. PCC 7002] Length = 260 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 52/220 (23%), Positives = 97/220 (44%), Gaps = 11/220 (5%) Query: 15 LFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 FF S S T A+ L I+ RG L+ + + G+ +G +++ L++ + Sbjct: 17 FFFGSTSLTQATPLETIQARGILRVAVKENVRPLGFRDEAGNLQGLEIEIAHQLAAELLG 76 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 D ++ +PL +ER A+ + ++D++ R+ + F P Y DG GF+ Sbjct: 77 DRQAVELIPLTNQERLDAVLTGEVDLVIAQLGLNASRQRLVN--FSPYYYLDGIGFVTRD 134 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 ++ I S++Q+S I V G+ + YF + + +E + Sbjct: 135 RE-IQSLNQISDQRIVVLEGSEAIAAVRAYFPGVTL----VGVNSYQEALNYLENNETAF 189 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + GD S L + P E+ +LP ++ +PLA A +G Sbjct: 190 FAGDHSVLTG--WVQEYP-EYQLLPAWLTGNPLAIAFPKG 226 >gi|227546810|ref|ZP_03976859.1| ABC superfamily ATP binding cassette transporter, binding protein [Bifidobacterium longum subsp. infantis ATCC 55813] gi|312132398|ref|YP_003999737.1| hisj2 [Bifidobacterium longum subsp. longum BBMN68] gi|322691558|ref|YP_004221128.1| amino acid ABC transporter substrate-binding protein [Bifidobacterium longum subsp. longum JCM 1217] gi|227212772|gb|EEI80653.1| ABC superfamily ATP binding cassette transporter, binding protein [Bifidobacterium longum subsp. infantis ATCC 55813] gi|311772697|gb|ADQ02185.1| HisJ2 [Bifidobacterium longum subsp. longum BBMN68] gi|320456414|dbj|BAJ67036.1| amino acid ABC transporter substrate binding component [Bifidobacterium longum subsp. longum JCM 1217] Length = 300 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 64/232 (27%), Positives = 109/232 (46%), Gaps = 23/232 (9%) Query: 18 TSFSTNASI--LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 TS S NA L +IKK G +K + + F V +G ++G+DV F L+ + DP Sbjct: 45 TSSSANAKARSLDEIKKSGKIKIAVFSDKAPFGYVDKDGKYQGYDVYFAEQLAKDLGVDP 104 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 +Y ++ R L S ++D++ N T R+ + A +P G + + Sbjct: 105 ---EYTSVDPAARVDVLTSNKVDLVLANFTVTDERKEKVDFA-KPYMKV-ALGVVSPESA 159 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFK--AHNMKYHPIVFERVEEIDAAYRA---HR 190 I+ VSQL G ++ + GTT E +F+ A N+K ++ ++ AY A R Sbjct: 160 QITDVSQLDGKTLIIAKGTTAET----WFEKNAPNVK-----LQKYDQYADAYNALLDGR 210 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 DA++ D + + A +N V + + +APA+ +G+TE N V+ Sbjct: 211 GDAFSTDNTEVLAWAKSN--KGFKVGITHLGDDDTIAPAVQKGNTELLNFVN 260 >gi|332076443|gb|EGI86906.1| major cell-binding factor [Streptococcus pneumoniae GA41301] Length = 254 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 46/176 (26%), Positives = 84/176 (47%), Gaps = 6/176 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 + DI+KRG L G+ + F + G + G + D + ++ + KI+Y+P+ A Sbjct: 19 IADIQKRGELVVGVKQDVPNFGYKDPKTGTYSGIETDLAKMVADEL---KVKIRYVPVTA 75 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 + R L ++Q+D+ +T+ E F Y D GF+++K I + L+G Sbjct: 76 QTRGPLLDNEQVDM--DIATFTITDERKKLYNFTSPYYTDASGFLVNKSAKIKKIEDLNG 133 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 +I V G+ T+ + + K +K+ + E+ + AHR DA++ D S L Sbjct: 134 KTIGVAQGSITQRLITELGKKKGLKFKFVELGSYPELITSLHAHRIDAFSVDRSIL 189 >gi|301793800|emb|CBW36191.1| putative glutamine-binding protein precursor [Streptococcus pneumoniae INV104] Length = 254 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 46/176 (26%), Positives = 84/176 (47%), Gaps = 6/176 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 + DI+KRG L G+ + F + G + G + D + ++ + KI+Y+P+ A Sbjct: 19 IADIQKRGELVVGVKQDVPNFGYKDPKTGTYSGIETDLAKMVADEL---KVKIRYVPVTA 75 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 + R L ++Q+D+ +T+ E F Y D GF+++K I + L+G Sbjct: 76 QTRGPLLDNEQVDM--DIATFTITDERKKLYNFTSPYYTDASGFLVNKSAKIKKIEDLNG 133 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 +I V G+ T+ + + K +K+ + E+ + AHR DA++ D S L Sbjct: 134 KTIGVAQGSITQRLITELGKKKGLKFKFVELGSYPELITSLHAHRIDAFSVDRSIL 189 >gi|168482841|ref|ZP_02707793.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae CDC1873-00] gi|172043606|gb|EDT51652.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae CDC1873-00] Length = 254 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 46/176 (26%), Positives = 84/176 (47%), Gaps = 6/176 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 + DI+KRG L G+ + F + G + G + D + ++ + KI+Y+P+ A Sbjct: 19 IADIQKRGELVVGVKQDVPNFGYKDPKTGTYSGIETDLAKMVADEL---KVKIRYVPVTA 75 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 + R L ++Q+D+ +T+ E F Y D GF+++K I + L+G Sbjct: 76 QTRGPLLDNEQVDM--DIATFTITDERKKLYNFTSPYYTDASGFLVNKSAKIKKIEDLNG 133 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 +I V G+ T+ + + K +K+ + E+ + AHR DA++ D S L Sbjct: 134 KTIGVAQGSITQRLITELGKKKGLKFKFVELGSYPELITSLHAHRIDAFSVDRSIL 189 >gi|310639894|ref|YP_003944652.1| abc transporter, periplasmic glutamine-binding protein [Paenibacillus polymyxa SC2] gi|309244844|gb|ADO54411.1| ABC transporter, periplasmic glutamine-binding protein [Paenibacillus polymyxa SC2] Length = 276 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 59/252 (23%), Positives = 112/252 (44%), Gaps = 23/252 (9%) Query: 6 FVSILCLIILFFTSFSTNASILGD----------IKKRGFLKCGI--NTGLVGFAEVKAN 53 V++ CL++L A+ G+ IK+RG L G+ +T L G + A+ Sbjct: 12 LVALTCLLVLAGCGGKQEAATSGNEAAASNGLEAIKQRGKLVVGVKYDTKLFGLKD-PAS 70 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G +GFD+D +A++ IF D +K++ + +K R LQ+ ID + T+ E Sbjct: 71 GKVEGFDIDIAKAVAKHIFGDETKLELKEVTSKTRITLLQNGDIDAIIAT--MTISDERK 128 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYH 172 + F + + GQ ++ K I+ + L+ + G+T+ A + K Sbjct: 129 KQVDFSDVYFNAGQSLLVKKGSPITGLESLTPDTKVLAVKGSTS----AKNIREKAPKAT 184 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + FE ++ A +A + A T D S L ++ + + ++ ++ P A+ + Sbjct: 185 ILEFENYQDAFNALKAGKGQALTTDNSILLGMQ---QQDPNYTLVGGNFTEEPYGIAVKK 241 Query: 233 GDTEWYNIVSWT 244 G TE ++ T Sbjct: 242 GQTELLQAINDT 253 >gi|227505906|ref|ZP_03935955.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Corynebacterium striatum ATCC 6940] gi|227197534|gb|EEI77582.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Corynebacterium striatum ATCC 6940] Length = 355 Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 37/131 (28%), Positives = 68/131 (51%), Gaps = 5/131 (3%) Query: 27 LGDIKKRGFLKCGIN--TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 + DI KRG + G++ L+ + + A+G+ +GF+VD R ++ IFDDP+K+ + + Sbjct: 91 IPDIYKRGRIIVGVDRSNNLMSYRDT-ASGEVRGFEVDIAREIARDIFDDPNKVDFRFVE 149 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 + ER AL + +DI+ R + R+ +AF ++ GI S+ + Sbjct: 150 SSERTSALNERSVDIVIRTMSISAERQRE--VAFSAPYMTTKTKLLVLSSSGIRSIDDTA 207 Query: 145 GASICVQAGTT 155 G ++C G+T Sbjct: 208 GKTLCAVQGST 218 >gi|149189496|ref|ZP_01867780.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio shilonii AK1] gi|148836653|gb|EDL53606.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio shilonii AK1] Length = 264 Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 65/237 (27%), Positives = 106/237 (44%), Gaps = 21/237 (8%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTG--LVGFAEVKANGDWKGFDVDF 63 V+ + L +S S A L DI++RG++K G++ G +GF + K N G+DVD Sbjct: 6 LVATILASALAISSTSAFAGKLEDIRERGYIKIGVSLGGEPIGFRDQKNNP--AGYDVDL 63 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 + L+ + + ++ ++ R L S Q+D + N TL R S+ + I Y Sbjct: 64 AKRLAEKL---GVEARFTDVHGDARVSMLFSDQLDAVIGNMSATLERAKSVNFS---IPY 117 Query: 124 FDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 I+H+K + I+S+ L+G + V G+T E F + +V+ Sbjct: 118 ARAGLRIVHQKDQDINSLQDLAGKRVVVGRGSTGEA-----FLKREVPEAELVYTDNFAP 172 Query: 183 DAA--YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 D R R DA D S + L N V LP + S P+A + +GD E+ Sbjct: 173 DGVLLLRQGRVDAGIEDSSLIDYLATNN---PNLVTLPGLHSNDPIAIGVRKGDAEY 226 >gi|58337338|ref|YP_193923.1| glutamine ABC transporter substrate-binding protein [Lactobacillus acidophilus NCFM] gi|58254655|gb|AAV42892.1| glutamine ABC transporter substrate-binding protein [Lactobacillus acidophilus NCFM] Length = 286 Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 61/224 (27%), Positives = 102/224 (45%), Gaps = 15/224 (6%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 +N + + +IK+RG+L+ + L + V +NG G+DV ++ D KI+++ Sbjct: 42 SNQNGVSEIKRRGYLRVAVFGDLPPYGWVNSNGKRVGYDVYLAHRMTQ---DLGVKIRFV 98 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 +NA R L S + DI+ N T R+ + A +P G I K I+S + Sbjct: 99 QVNANNRVDTLNSNKADIILANFTVTPERKDVVDFA-KPYMKV-SVGVISPKSAPITSAN 156 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 QL + V GTT E +YF + + + F+ + A + R A D S L Sbjct: 157 QLKNKKLIVTKGTTAE----NYF-SQQKNVNLLKFDSKTQQFNALKNGRGAALADDNSYL 211 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 YA N P V + I K ++PA+ +G+ ++ WT+ Sbjct: 212 YAWVKQN--PKYTVGIKSIGPKQYISPAVKKGNRS---LLKWTN 250 >gi|206560032|ref|YP_002230796.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315] gi|198036073|emb|CAR51967.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315] Length = 271 Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 73/242 (30%), Positives = 109/242 (45%), Gaps = 23/242 (9%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRAL 67 L + L + +A L DIKK G L+ + G+ + K+N G DVD+ +AL Sbjct: 10 LIGVALVTAGTAAHADRLDDIKKAGVLRVATFDSNPPFGYVDAKSN-HIVGLDVDYAKAL 68 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD-G 126 + + K+Q P N R L S ++D++ N +T+ E + + F I YF G Sbjct: 69 ADKL---GVKLQLQPTNPANRIPFLTSGKVDLVLAN--FTITDERAKQVDFS-IPYFSSG 122 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF-KAHNMKYH--PIVFERVEEID 183 Q F + KK + S QL+G + GTT E+TL + F KA + Y P F Sbjct: 123 QQF-LAKKGVLKSADQLNGLRVGADKGTTNEITLREKFPKATIVAYDDTPFAF------- 174 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI-ISKSPLAPAIIQGDTEWYNIVS 242 AA RA A T D L L L N ++ +P IS + + +G+T V+ Sbjct: 175 AALRAGNVQAITQDGPKLIGL-LANVPDKQNYEIPAFTISNDYMGVGVPKGETRLLGFVN 233 Query: 243 WT 244 T Sbjct: 234 DT 235 >gi|319946728|ref|ZP_08020962.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus australis ATCC 700641] gi|319746776|gb|EFV99035.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus australis ATCC 700641] Length = 285 Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 59/225 (26%), Positives = 105/225 (46%), Gaps = 23/225 (10%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 A + +IKK G L+ + F V +G ++G+D++ L+ + P +Y+ + Sbjct: 37 ARTIEEIKKSGELRIAVFGDKKPFGYVDNDGSYQGYDIELGNQLAKDLGVKP---KYVSV 93 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 +A R L S ++DI N T R ++ L + ++ G + K K I+ V Sbjct: 94 DAANRAEYLISNKVDITLANFTVTDERKKQVDFALPYMKVSL----GVVSPKDKVITDVK 149 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIV-FERVEEIDAAYRA---HRCDAYTGD 197 QL G ++ V GTT E YF+ K HP V ++ ++ AY+A R DA++ D Sbjct: 150 QLEGKTLIVTKGTTAET----YFE----KNHPEVKLQKYDQYSDAYQALLDGRGDAFSTD 201 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + + A L N V + + +APA+ +G+ E + ++ Sbjct: 202 NTEVLAWALEN--KGYEVGITSLGDPDTIAPAVQKGNKELLDFIN 244 >gi|307250985|ref|ZP_07532911.1| hypothetical protein appser4_17490 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307255603|ref|ZP_07537408.1| hypothetical protein appser9_18280 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307260054|ref|ZP_07541766.1| hypothetical protein appser11_18400 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306857013|gb|EFM89143.1| hypothetical protein appser4_17490 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306861452|gb|EFM93441.1| hypothetical protein appser9_18280 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306865890|gb|EFM97766.1| hypothetical protein appser11_18400 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 298 Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 52/223 (23%), Positives = 104/223 (46%), Gaps = 10/223 (4%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 ST + IK++G ++ G+ F V ANG +GFDV+ + +++ + K+++ Sbjct: 52 STAKDSVAQIKEKGVIRIGVFGDKPPFGYVDANGKSQGFDVEIAKEIANDLLGSSDKVEF 111 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD-GQGFIMHKKKGISS 139 + A R L+S ++D++ N T R + A Y + G + K I+ Sbjct: 112 VLTEAANRVEYLKSNKVDLILANFTKTPERAEVVDFA---APYMNVALGVVSPKGALITD 168 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + QL G ++ V GTT + YF ++ + + + F++ E A + R A D + Sbjct: 169 LKQLEGKTLLVNKGTTADA----YFTKNHPEINLLKFDQNTETFDALKDGRGVALAHDNA 224 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 ++A N P+ V + + +APA+ +G+ ++++ Sbjct: 225 LVWAWAKEN--PTFDVAIGSVGPAEQIAPAVQKGNQALLDVIN 265 >gi|258645927|ref|ZP_05733396.1| CjaA protein [Dialister invisus DSM 15470] gi|260403296|gb|EEW96843.1| CjaA protein [Dialister invisus DSM 15470] Length = 289 Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 54/212 (25%), Positives = 96/212 (45%), Gaps = 15/212 (7%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 + DIK+ G L G+ + F + +G+++G+DV F L+ D K +Y+ L Sbjct: 43 IADIKQSGKLIIGVFSDKAPFGYIDKDGNYQGYDVYFAERLAK---DMGVKAEYISLEPA 99 Query: 87 ERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 R ++ ++DI+ N T R ++ L + + G + KK I+S+ QL Sbjct: 100 NRVEYAKTGKVDIVLANFTVTKERAEQVDFALPYMKVAL----GVVSPKKDNITSIDQLK 155 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 + V GTT E YF H+ + + F++ E A R A++ D + + A Sbjct: 156 DKLLIVAKGTTAET----YFDKHHPEIKLLKFDQYTETFNALLDGRGAAFSTDNTEVLAW 211 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + N P V + + +APA+ +G+ E Sbjct: 212 AMKN--PDFKVGITSLGDLDTIAPAVQKGNKE 241 >gi|167748158|ref|ZP_02420285.1| hypothetical protein ANACAC_02902 [Anaerostipes caccae DSM 14662] gi|167652150|gb|EDR96279.1| hypothetical protein ANACAC_02902 [Anaerostipes caccae DSM 14662] Length = 289 Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 50/185 (27%), Positives = 83/185 (44%), Gaps = 10/185 (5%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 S N S + IKK G +K G+ + F V NG +G+DV L+ + D +K+++ Sbjct: 32 SDNQSSVEQIKKNGKIKVGVFSDKPPFGYVDKNGKNQGYDVVLAHRLAKDLLGDENKVEF 91 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLRE--ISLGLAFRPITYFDGQGFIMHKKKGIS 138 + + A R LQS ++D++ N T R+ + L + ++ G + K I+ Sbjct: 92 VLVEAASRVEFLQSNKVDVILANFTVTDERKEVVDYALPYMKVSL----GVVSPNGKVIT 147 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 V QL G + V GTT E YF + +++ E A + R A D Sbjct: 148 DVKQLKGKKLIVNKGTTAET----YFTQKYPDIELLKYDQNTEAFNALKDGRGAALAHDN 203 Query: 199 SALYA 203 + +YA Sbjct: 204 TLVYA 208 >gi|217032569|ref|ZP_03438059.1| hypothetical protein HPB128_172g32 [Helicobacter pylori B128] gi|216945774|gb|EEC24398.1| hypothetical protein HPB128_172g32 [Helicobacter pylori B128] Length = 190 Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 46/163 (28%), Positives = 80/163 (49%), Gaps = 12/163 (7%) Query: 10 LCLIILFFTSFSTNASILGD----IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 L LI L F++ S + D IK+RG LK G+ + F V + G ++G+DV + Sbjct: 14 LVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGYDVVIAK 73 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ + D +KI+++P+ A R L++ ++DI+ N T RE + A +P Y Sbjct: 74 RMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKVVDFA-KP--YMK 130 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168 ++ K I ++ +L + V GTT AD++ N Sbjct: 131 VALGVISKDGVIKNIEELKDKELIVNKGTT-----ADFYFTKN 168 >gi|326315074|ref|YP_004232746.1| family 3 extracellular solute-binding protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323371910|gb|ADX44179.1| extracellular solute-binding protein family 3 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 305 Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 54/224 (24%), Positives = 100/224 (44%), Gaps = 8/224 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQYL 81 L IK+ G + G + F+ K + GF D C + A+ P+ ++QY Sbjct: 35 LARIKQTGVITIGSRDSSIPFSYSPKGGSEPVGFSNDICLKIVDAVKAKLGLPALRVQYT 94 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 LN+ R +Q+ +D+ T +++R+ + AF P + G + K GI+S+S Sbjct: 95 LLNSLNRIPLMQNGTVDLDCATTTNSVVRQQMV--AFAPSHFVAGITVAVKKNSGINSLS 152 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L+G ++ AG+T+ L Y +A ++ + + + R DAY D L Sbjct: 153 DLAGKTVATVAGSTSVQLLRTYKRAEALEVRELSGKDTADAFLLLANGRADAYVLDDVQL 212 Query: 202 YALKLTNDRPSEHVILPDII-SKSPLAPAIIQGDTEWYNIVSWT 244 L ++ P E+ +L D++ + P + D ++ +V T Sbjct: 213 AGLIASSPNPGEYRMLRDVVLRQEPYGIMFRKNDPQFEALVDET 256 >gi|224367959|ref|YP_002602122.1| GltB1 [Desulfobacterium autotrophicum HRM2] gi|223690675|gb|ACN13958.1| GltB1 [Desulfobacterium autotrophicum HRM2] Length = 290 Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 55/248 (22%), Positives = 102/248 (41%), Gaps = 9/248 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++ + FTS + L I G G + F A + GF Sbjct: 1 MRKPLLFGTILMLFMVFTSGAFAGDTLKKISDSNKFIVGARDGAIPFGFHNAENEHVGFS 60 Query: 61 VDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 +D + L A+ P + + +N K R + + ++++ T+ RE ++ + Sbjct: 61 IDLAKELHKALEERLGKPLEFEIKVVNPKTRIPLVANGNLNMVCGAATHTVPREDTVDFS 120 Query: 118 FRPITYF-DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA--HNMKYHPI 174 +T+F G + K G LSG I G+T E T+ + ++ N + Sbjct: 121 ---LTFFLTGSQLLAKKSGGYMVAKDLSGKKIGAAQGSTNEKTIRNLNESGYFNPPVKLV 177 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 V++ + A R +AY GD S L +K P +VIL +++S P + + D Sbjct: 178 VYQEHTQGMLALRNGAINAYCGDGSHLAGMKAKAMDPDNYVILGELLSYDPYGFILPEND 237 Query: 235 TEWYNIVS 242 + + + V+ Sbjct: 238 SNFKDFVN 245 >gi|228957061|ref|ZP_04118835.1| hypothetical protein bthur0005_5930 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228802621|gb|EEM49464.1| hypothetical protein bthur0005_5930 [Bacillus thuringiensis serovar pakistani str. T13001] Length = 276 Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 13/207 (6%) Query: 30 IKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 IKKRG L G+ +T L G + G +GFDVD +AL+ I D K++ + +K Sbjct: 45 IKKRGKLVVGVKNDTNLFGLKN-PSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKT 103 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGA 146 R L++ ID + T+ E + F + + GQ ++ K I SV + G Sbjct: 104 RIPMLKNGDIDAIIAT--MTITEERKKEVDFSDVYFKAGQSLLVKKGSNIKSVDDIKQGV 161 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 + G+T+ + + + + + FE E A +A + D T D + LY + Sbjct: 162 KVLAVKGSTS----TNNIRQKSPEATVLEFENYSEAFTALKAGKGDVLTTDNAILYGMA- 216 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQG 233 + S + ++ I + P A+ +G Sbjct: 217 --KQDSNYEVVGKIFTDEPYGIAVQKG 241 >gi|291302012|ref|YP_003513290.1| extracellular solute-binding protein family 3 [Stackebrandtia nassauensis DSM 44728] gi|290571232|gb|ADD44197.1| extracellular solute-binding protein family 3 [Stackebrandtia nassauensis DSM 44728] Length = 323 Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 10/157 (6%) Query: 17 FTSFSTNASILGDIKKR----GFLKCGIN--TGLVGFAEVKANGDWKGFDVDFCRALSSA 70 S+ + S D KR G LK G++ T L+G+ + A+G+ KGFDV R ++ Sbjct: 66 LKSYDPSGSKSSDDIKRIVDAGVLKVGVDQTTNLMGYRD-PASGNMKGFDVAIAREIAKE 124 Query: 71 IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130 + D KIQ++ +N+K R AL+ +++D++ R R +G + Y+ + Sbjct: 125 LLGDEDKIQFVTMNSKGRIPALKERKVDLVVRTMTMNCDRWKDIGFSAE---YYTAHQRV 181 Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 + + L G +C +T+ + D KA Sbjct: 182 LVPSSASDDIDDLKGEKVCAAEDSTSLNRIRDDLKAK 218 >gi|206967952|ref|ZP_03228908.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus AH1134] gi|228906387|ref|ZP_04070271.1| hypothetical protein bthur0013_5700 [Bacillus thuringiensis IBL 200] gi|228951131|ref|ZP_04113247.1| hypothetical protein bthur0006_5580 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229077953|ref|ZP_04210562.1| hypothetical protein bcere0023_6430 [Bacillus cereus Rock4-2] gi|229108249|ref|ZP_04237871.1| hypothetical protein bcere0018_5390 [Bacillus cereus Rock1-15] gi|229143367|ref|ZP_04271798.1| hypothetical protein bcere0012_5390 [Bacillus cereus BDRD-ST24] gi|206736872|gb|EDZ54019.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus AH1134] gi|228640174|gb|EEK96573.1| hypothetical protein bcere0012_5390 [Bacillus cereus BDRD-ST24] gi|228675265|gb|EEL30487.1| hypothetical protein bcere0018_5390 [Bacillus cereus Rock1-15] gi|228705291|gb|EEL57668.1| hypothetical protein bcere0023_6430 [Bacillus cereus Rock4-2] gi|228808541|gb|EEM55044.1| hypothetical protein bthur0006_5580 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228853299|gb|EEM98072.1| hypothetical protein bthur0013_5700 [Bacillus thuringiensis IBL 200] Length = 276 Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 13/207 (6%) Query: 30 IKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 IKKRG L G+ +T L G + G +GFDVD +AL+ I D K++ + +K Sbjct: 45 IKKRGKLVVGVKNDTNLFGLKN-PSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKT 103 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGA 146 R L++ ID + T+ E + F + + GQ ++ K I SV + G Sbjct: 104 RIPMLKNGDIDAIIAT--MTITEERKKEVDFSDVYFKAGQSLLVKKGSNIKSVDDIKQGV 161 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 + G+T+ + + + + + FE E A +A + D T D + LY + Sbjct: 162 KVLAVKGSTS----TNNIRQKSPEATVLEFENYSEAFTALKAGKGDVLTTDNAILYGM-- 215 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQG 233 + S + ++ I + P A+ +G Sbjct: 216 -AKQDSNYEVVGKIFTDEPYGIAVQKG 241 >gi|229188845|ref|ZP_04315879.1| hypothetical protein bcere0002_5360 [Bacillus cereus ATCC 10876] gi|228594658|gb|EEK52443.1| hypothetical protein bcere0002_5360 [Bacillus cereus ATCC 10876] Length = 276 Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 13/207 (6%) Query: 30 IKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 IKKRG L G+ +T L G + G +GFDVD +AL+ I D K++ + +K Sbjct: 45 IKKRGKLVVGVKNDTNLFGLKN-PSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKT 103 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGA 146 R L++ ID + T+ E + F + + GQ ++ K I SV + G Sbjct: 104 RIPMLKNGDIDAIIAT--MTITEERKKEVDFSDVYFKAGQSLLVKKGSNIKSVDDIKQGV 161 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 + G+T+ + + + + + FE E A +A + D T D + LY + Sbjct: 162 KVLAVKGSTS----TNNIRQKSPEATVLEFENYSEAFTALKAGKGDVLTTDNAILYGM-- 215 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQG 233 + S + ++ I + P A+ +G Sbjct: 216 -AKQDSNYEVVGKIFTDEPYGIAVQKG 241 >gi|152979602|ref|YP_001345231.1| extracellular solute-binding protein [Actinobacillus succinogenes 130Z] gi|150841325|gb|ABR75296.1| extracellular solute-binding protein family 3 [Actinobacillus succinogenes 130Z] Length = 288 Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 61/244 (25%), Positives = 109/244 (44%), Gaps = 11/244 (4%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + S + IK+ ++ G+ + F V +G +GFDV+ +AL+ + D +K+++ Sbjct: 37 AAKTSAVERIKQADKIRIGVFSDKPPFGYVDKDGKNQGFDVEIAKALTKDLLGDENKVEF 96 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + + A R L S +IDI N T R+ + A P G + I+ V Sbjct: 97 VLVEAANRAEYLLSNKIDITLANFTVTPARQEVVAFA-EPYMKV-ALGVVSKDGAVITDV 154 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 QL G ++ V GTT + YF + + + FE+ E A R R DA D + Sbjct: 155 KQLEGKTLLVNKGTTADA----YFSKNFPQIKLLKFEQNTETFEALRDGRGDALAHDNAL 210 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L+A N P V + ++ +A A+ + D +++ W + M + G+ Q+ Sbjct: 211 LFAWAKEN--PGFTVGVKELGDLDFIAGAVRKEDK---DLLEWLNAEMEKLGKEGVLQQA 265 Query: 261 INQV 264 ++V Sbjct: 266 YDKV 269 >gi|228919494|ref|ZP_04082858.1| hypothetical protein bthur0011_5190 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228840137|gb|EEM85414.1| hypothetical protein bthur0011_5190 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 276 Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 13/207 (6%) Query: 30 IKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 IKKRG L G+ +T L G + G +GFDVD +AL+ I D K++ + +K Sbjct: 45 IKKRGKLVVGVKNDTNLFGLKN-PSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKT 103 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGA 146 R L++ ID + T+ E + F + + GQ ++ K I SV + G Sbjct: 104 RIPMLKNGDIDAIIAT--MTITEERKKEVDFSDVYFKAGQSLLVKKGSNIKSVDDIKQGV 161 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 + G+T+ + + + + + FE E A +A + D T D + LY + Sbjct: 162 KVLAVKGSTS----TNNIRQKSPEATVLEFENYSEAFTALKAGKGDVLTTDNAILYGM-- 215 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQG 233 + S + ++ I + P A+ +G Sbjct: 216 -AKQDSNYEVVGKIFTDEPYGIAVQKG 241 >gi|167587241|ref|ZP_02379629.1| extracellular solute-binding protein, family 3 [Burkholderia ubonensis Bu] Length = 271 Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 70/241 (29%), Positives = 105/241 (43%), Gaps = 21/241 (8%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRAL 67 L + L + +A L DI+K G L+ + GF + K N G DVD+ +AL Sbjct: 10 LVGVALVTAGSAAHADRLDDIRKAGVLRVATFDSNPPFGFVDAKTN-HIVGLDVDYAKAL 68 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + K+Q P N R L S ++D++ N +T+ E + + F I YF Sbjct: 69 ADKL---GVKLQLQPTNPANRIPFLTSGKVDLVLAN--FTITDERAKQVDFS-IPYFSSG 122 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD-YFKAHNMKYH--PIVFERVEEIDA 184 + KK + S QL+G + GTT E+TL + Y KA + Y P F A Sbjct: 123 QQFLAKKGVLKSAEQLNGLRVGADKGTTNEITLREKYPKATIVAYDDTPFAF-------A 175 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI-ISKSPLAPAIIQGDTEWYNIVSW 243 A RA A T D L L L N ++ +P IS + + +G+T V+ Sbjct: 176 ALRAGNVQAITQDGPKLIGL-LANVPDKQNYEIPAFAISNDYMGVGVPKGETRLLGFVND 234 Query: 244 T 244 T Sbjct: 235 T 235 >gi|229068325|ref|ZP_04201628.1| hypothetical protein bcere0025_5400 [Bacillus cereus F65185] gi|228714786|gb|EEL66658.1| hypothetical protein bcere0025_5400 [Bacillus cereus F65185] Length = 273 Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 13/207 (6%) Query: 30 IKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 IKKRG L G+ +T L G + G +GFDVD +AL+ I D K++ + +K Sbjct: 42 IKKRGKLVVGVKNDTNLFGLKN-PSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKT 100 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGA 146 R L++ ID + T+ E + F + + GQ ++ K I SV + G Sbjct: 101 RIPMLKNGDIDAIIAT--MTITEERKKEVDFSDVYFKAGQSLLVKKGSNIKSVDDIKQGV 158 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 + G+T+ + + + + + FE E A +A + D T D + LY + Sbjct: 159 KVLAVKGSTS----TNNIRQKSPEATVLEFENYSEAFTALKAGKGDVLTTDNAILYGM-- 212 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQG 233 + S + ++ I + P A+ +G Sbjct: 213 -AKQDSNYEVVGKIFTDEPYGIAVQKG 238 >gi|229177165|ref|ZP_04304554.1| hypothetical protein bcere0005_5410 [Bacillus cereus 172560W] gi|228606346|gb|EEK63778.1| hypothetical protein bcere0005_5410 [Bacillus cereus 172560W] Length = 276 Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 13/207 (6%) Query: 30 IKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 IKKRG L G+ +T L G + G +GFDVD +AL+ I D K++ + +K Sbjct: 45 IKKRGKLVVGVKNDTNLFGLKN-PSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKT 103 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGA 146 R L++ ID + T+ E + F + + GQ ++ K I SV + G Sbjct: 104 RIPMLKNGDIDAIIAT--MTITEERKKEVDFSDVYFKAGQSLLVKKGSNIKSVDDIKQGV 161 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 + G+T+ + + + + + FE E A +A + D T D + LY + Sbjct: 162 KVLAVKGSTS----TNNIRQKSPEATVLEFENYSEAFTALKAGKGDVLTTDNAILYGM-- 215 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQG 233 + S + ++ I + P A+ +G Sbjct: 216 -AKQDSNYEVVGKIFTDEPYGIAVQKG 241 >gi|154175491|ref|YP_001408468.1| acriflavine resistance protein [Campylobacter curvus 525.92] gi|112802700|gb|EAU00044.1| acriflavine resistance protein [Campylobacter curvus 525.92] Length = 288 Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 15/221 (6%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 A + IK+RG+++ G+ + F V +G +G+D+ F + ++ + D SK+++ + Sbjct: 38 ADAIAKIKERGYVRIGVFSDKPPFGYVDKDGKNQGYDIYFAKRIAKDMLGDESKVKFELV 97 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLRE--ISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 A R L + ++DI N T R + L + ++ G + + I SV Sbjct: 98 EAAGRVEVLTADKVDITLANFTKTPERAQVVDFALPYMKVSL----GVVSPEGDVIKSVD 153 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 +L G + V GTT + YF + + +++ E AA R A D + L Sbjct: 154 ELKGKKLIVNKGTTADA----YFTKNYPDIELVKYDQNTETFAALVDKRGAALAHDNALL 209 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT---EWYN 239 +A N P V + + +APA+ +G+T EW N Sbjct: 210 FAWAKEN--PGFVVGIEALGDVDVIAPAVKKGNTALLEWLN 248 >gi|229083877|ref|ZP_04216186.1| hypothetical protein bcere0022_5340 [Bacillus cereus Rock3-44] gi|228699455|gb|EEL52131.1| hypothetical protein bcere0022_5340 [Bacillus cereus Rock3-44] Length = 276 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 53/220 (24%), Positives = 98/220 (44%), Gaps = 15/220 (6%) Query: 21 STNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 + ++ IKKRG L G+ +T L G + G +GFDVD +AL+ I D SK+ Sbjct: 36 TKQGGVVEQIKKRGKLVVGVKHDTNLFGLKN-PSTGKVEGFDVDIAKALAKKILGDESKL 94 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + + +K R L++ ID + T+ E + F + + GQ ++ K I Sbjct: 95 ELKEVTSKTRIPMLKNGDIDTIIAT--MTITEERKKEVDFSDVYFKAGQSLLVKKGSNIK 152 Query: 139 SVSQLSG--ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 S+ + + V+ T+T + + + + + FE E A +A + D T Sbjct: 153 SIDDVKKDVKVLAVKGSTST-----NNIRQKSPEATVLEFENYSEAFTALKAGKGDVLTT 207 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 D + LY + + + + ++ I + P A+ +G T+ Sbjct: 208 DNAILYGMA---KQDANYQVVGKIFTDEPYGIAVQKGATD 244 >gi|325125055|gb|ADY84385.1| Glutamine ABC transporter substrate-binding protein [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 286 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 62/234 (26%), Positives = 105/234 (44%), Gaps = 15/234 (6%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 +N + + +IK+RG+++ + L + V G G+DV R ++ D KI+++ Sbjct: 42 SNENGVSEIKRRGYIRVAVFGDLPPYGWVNEQGKRVGYDVYLARRIAK---DLNVKIRFI 98 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 +NA R L S + DI+ N T R+ + A +P G I K I+S Sbjct: 99 QVNANNRVDTLNSNKADIVLANFTVTPERKDVVDFA-KPYMKVS-VGVISPKNAPINSAQ 156 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 +L G + V GTT E +YF A + + F+ + A + R A D S L Sbjct: 157 ELKGKKLIVTKGTTAE----NYF-AKQSGVNLLKFDSKTQQFNALKNGRGAALADDNSYL 211 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 YA N P V + I + +APA+ +G+ ++ WT++ + + G Sbjct: 212 YAWVKKN--PKYVVGIKSIGPRQYVAPAVKKGNRS---LLKWTNHEITKLTKEG 260 >gi|312602223|ref|YP_004022068.1| hypothetical protein RBRH_00467 [Burkholderia rhizoxinica HKI 454] gi|312169537|emb|CBW76549.1| unnamed protein product [Burkholderia rhizoxinica HKI 454] Length = 283 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 72/265 (27%), Positives = 120/265 (45%), Gaps = 20/265 (7%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFD 60 K +S L +L + +A L DIKK G L+ + GF + K + G D Sbjct: 15 KSTVLSTLLAGLLIVAAGVAHADRLDDIKKAGVLRVATFDSNPPFGFVDAKTH-HIVGLD 73 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+ +AL+ + K++ P N R L S+++D++ N +T+ E + + F Sbjct: 74 VDYAKALADKLG---VKLELQPTNPANRIPFLTSRKVDLVLAN--FTITEERAKQVDFS- 127 Query: 121 ITYF-DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I YF GQ F + KK + S QL+G I GT E+TL + F + + ++ Sbjct: 128 IPYFASGQQF-LAKKGVLKSAEQLNGLRIGADKGTINEITLREKFPQATI----VAYDDT 182 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI-ISKSPLAPAIIQGDTEWY 238 AA RA A T D L L L N ++ +P IS + I +G+T Sbjct: 183 PFAFAALRAGNVQAITQDGPKLVGL-LANVPDKQNYEIPAFTISNDYMGVGIPKGETR-- 239 Query: 239 NIVSWTHYAMVTAEELGITQKNINQ 263 +V++ + + E+ G+ ++ N+ Sbjct: 240 -LVAFVNDTLRGLEKGGMAEQIYNR 263 >gi|300934588|ref|ZP_07149844.1| putative extracellular solute-binding protein [Corynebacterium resistens DSM 45100] Length = 408 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 15/144 (10%) Query: 27 LGDIKKRGFLKCGINTGL--VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 + +I KRG L GI L +G+ + G+ GF++D R ++ IF+DP K+++ + Sbjct: 122 VAEIHKRGRLIVGIAQSLNRLGYRD-PVTGELVGFEIDLAREIARDIFNDPEKVEFRYVE 180 Query: 85 AKERFLALQSKQIDILSRNTDWTLLRE-----ISLGLAFRPITYFDGQGFIMHKKKGISS 139 ++ R AL+ ++DI+SR T R+ S L RP I H Sbjct: 181 SRNREKALREGEVDIISRTMSITSARQQKTEFSSPYLTVRPRLLVPENSHIQH------- 233 Query: 140 VSQLSGASICVQAGTTTELTLADY 163 V L G ++C +T+ L +Y Sbjct: 234 VGDLKGKTVCATNDSTSASALRNY 257 >gi|260891043|ref|ZP_05902306.1| CjaA protein [Leptotrichia hofstadii F0254] gi|260859070|gb|EEX73570.1| CjaA protein [Leptotrichia hofstadii F0254] Length = 279 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 64/249 (25%), Positives = 111/249 (44%), Gaps = 18/249 (7%) Query: 1 MYKDF--FVSILCLIIL--FFTSFSTNASILGDI---KKRGFLKCGINTGLVGFAEVKAN 53 M K+F V I+ +++L F S ++ G I KK G ++ G+ F V N Sbjct: 1 MKKNFERLVKIIAILVLGVFAISCGKGSAEPGSIEAIKKAGKIRIGVFGDKPPFGFVDEN 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G +G+D+ + L+ + D +KI+++ L A R L S ++DI+ N T R+ Sbjct: 61 GKNQGYDIYLAKRLAKDLLGDENKIEFITLEAANRVEYLLSNKVDIILANFTVTDERKQK 120 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + A +P G + + I V +L G + V GTT E+ YF ++ Sbjct: 121 VDFA-KPYMKV-SLGIVSPEGAPIKDVKELKGKKLIVNKGTTAEI----YFTKNHPDIEL 174 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + +++ E A R A D + ++A N P V + + + +APA+ +G Sbjct: 175 LKYDQNTETFNALLDKRGAALAHDNTLVFAWATEN--PGFVVDIKQLGEQDYIAPAVRKG 232 Query: 234 DTE---WYN 239 + E W N Sbjct: 233 NKELLDWLN 241 >gi|116513425|ref|YP_812331.1| amino acid ABC transporter periplasmic protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116092740|gb|ABJ57893.1| amino acid ABC transporter substrate-binding protein, PAAT family [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 286 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 62/234 (26%), Positives = 105/234 (44%), Gaps = 15/234 (6%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 +N + + +IK+RG+++ + L + V G G+DV R ++ D KI+++ Sbjct: 42 SNENGVSEIKRRGYIRVAVFGDLPPYGWVNEQGKRVGYDVYLARRIAK---DLNVKIRFI 98 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 +NA R L S + DI+ N T R+ + A +P G I K I+S Sbjct: 99 QVNANNRVDTLNSNKADIVLANFTVTPERKDVVDFA-KPYMKVS-VGVISPKNAPINSAQ 156 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 +L G + V GTT E +YF A + + F+ + A + R A D S L Sbjct: 157 ELKGKKLIVTKGTTAE----NYF-AKQSGVNLLKFDSKTQQFNALKNGRGAALADDNSYL 211 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 YA N P V + I + +APA+ +G+ ++ WT++ + + G Sbjct: 212 YAWVKKN--PKYVVGIKSIGPRQYVAPAVKKGNRS---LLKWTNHEITKLTKEG 260 >gi|170734967|ref|YP_001774081.1| extracellular solute-binding protein [Burkholderia cenocepacia MC0-3] gi|169821005|gb|ACA95586.1| extracellular solute-binding protein family 3 [Burkholderia cenocepacia MC0-3] Length = 313 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 53/233 (22%), Positives = 99/233 (42%), Gaps = 6/233 (2%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK---IQYLPL 83 L ++ G + G + F+ + A G+ ++ C+AL ++I D ++ I+++P+ Sbjct: 46 LAKVRGSGTIALGYRDASIPFSYLNARNQPIGYSIELCKALVASIEDAINQSLTIRWVPV 105 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 + R A+ S ++D+ +T L R+ + AF PI + G ++ + I S L Sbjct: 106 TSDNRIDAVVSGKVDLECGSTTSNLERQKRV--AFSPIFFVAGTKVMVKRGAPIRSFRDL 163 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 +G + V AGTT E L D + V + A DA+ D LY Sbjct: 164 AGKKVAVTAGTTNEKALRDLNDKFRLGVQLQVVPDHAQGFALVANGGADAFATDDVLLYG 223 Query: 204 LKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L N + ++ ++ D +S P + D + +V T + E+ Sbjct: 224 LIAENASKGGQYDVVGDFLSYDPYGIMFRKDDPQLAQVVKTTFQELAADGEIA 276 >gi|145297676|ref|YP_001140517.1| ABC-type glutamine/glutamate transporter, periplasmic binding protein [Aeromonas salmonicida subsp. salmonicida A449] gi|142850448|gb|ABO88769.1| ABC-type glutamine/glutamate transporter, periplasmic binding protein [Aeromonas salmonicida subsp. salmonicida A449] Length = 278 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 57/234 (24%), Positives = 100/234 (42%), Gaps = 13/234 (5%) Query: 11 CLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 LI L S + A+ L IK R L G+ T F V G + GFD D R + Sbjct: 11 ALIGLGLASGAAQAADGSLDKIKARDKLIVGVFTDKPPFGYVDEKGSYVGFDTDLGRRFA 70 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 + D +K++++ + R LQS ++D++ N T+ E + F Sbjct: 71 KDLLGDENKVEFVAVEPASRIPFLQSDKVDLILANM--TVTPERREVVDFTNPNLRVAVQ 128 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 ++ + + L+ ++ V GTT ++ + ++ + + FE+ E A Sbjct: 129 VLVPEGSPAKGLGDLADKTLIVTTGTTADI----WLTRNHPDWKVLKFEKNTESLQALAQ 184 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE---WYN 239 R DAY D L++ N P V+ + ++ P+APA+ +G+ E W N Sbjct: 185 GRGDAYAQDNLVLFSWAKEN--PGYRVLPEKLGAEDPIAPAVKKGNIELRDWVN 236 >gi|293365028|ref|ZP_06611745.1| ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus oralis ATCC 35037] gi|307702261|ref|ZP_07639221.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus oralis ATCC 35037] gi|291316478|gb|EFE56914.1| ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus oralis ATCC 35037] gi|307624274|gb|EFO03251.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus oralis ATCC 35037] Length = 288 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 58/228 (25%), Positives = 106/228 (46%), Gaps = 23/228 (10%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + A + +IKK G L+ + F + +G ++G+D++ L+ D K++Y Sbjct: 37 TAKARTIDEIKKSGELRIAVFGDKKPFGYIDNDGSYQGYDIELGNQLAQ---DLGVKVKY 93 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKKGIS 138 + ++A R L S ++DI N T R ++ L + ++ G + K K I Sbjct: 94 VSVDAANRAEYLISNKVDITLANFTVTDERKKQVDFALPYMKVSL----GVVSPKDKVIK 149 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV-FERVEEIDAAYRA---HRCDAY 194 V +L G ++ V GTT E YF+ K HP V ++ ++ AY+A R DA+ Sbjct: 150 DVKELEGKTLIVTKGTTAET----YFE----KNHPEVKLQKYDQYSDAYQALLDGRGDAF 201 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + D + + A L N V + + +APA+ +G+ E + ++ Sbjct: 202 STDNTEVLAWALEN--KGFEVGISSLGDPDTIAPAVQKGNQELLDYIN 247 >gi|255321552|ref|ZP_05362710.1| acriflavine resistance protein [Campylobacter showae RM3277] gi|255301408|gb|EET80667.1| acriflavine resistance protein [Campylobacter showae RM3277] Length = 278 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 56/224 (25%), Positives = 98/224 (43%), Gaps = 15/224 (6%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + A L IK+RG+++ G+ + F V G +G+D+ F + ++ + D SK+++ Sbjct: 25 AAEADALAKIKERGYVRVGVFSDKPPFGYVDKEGKNQGYDIYFAKRIAKDLLGDESKVKF 84 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWT--LLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + A R L + ++DI N T R + L + ++ G + I Sbjct: 85 ELVEAAGRVEVLVADKVDITLANFTKTPERARVVDFALPYMKVSL----GVVSPDGAVIK 140 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 SV +L G + V GTT + YF ++ I +++ E AA R A D Sbjct: 141 SVDELKGKKLIVNKGTTADA----YFTKNHPDIELIKYDQNTETFAALVDKRGVALAHDN 196 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT---EWYN 239 + L+A N P V + + +APA+ +G+ EW N Sbjct: 197 ALLFAWAKEN--PGFTVGIEALGEVDVIAPAVKKGNKALLEWLN 238 >gi|104773439|ref|YP_618419.1| amino acid ABC transporter substrate-binding protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103422520|emb|CAI97094.1| Amino acid ABC transporter, substrate binding protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 286 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 62/234 (26%), Positives = 105/234 (44%), Gaps = 15/234 (6%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 +N + + +IK+RG+++ + L + V G G+DV R ++ D KI+++ Sbjct: 42 SNENGVSEIKRRGYIRVAVFGDLPPYGWVNEQGKRVGYDVYLARRIAK---DLNVKIRFI 98 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 +NA R L S + DI+ N T R+ + A +P G I K I+S Sbjct: 99 QVNANNRVDTLNSNKADIVLANFTVTPERKDVVDFA-KPYMKVS-VGVISPKNAPINSAQ 156 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 +L G + V GTT E +YF A + + F+ + A + R A D S L Sbjct: 157 KLKGKKLIVTKGTTAE----NYF-AKQSGVNLLKFDSKTQQFNALKNGRGAALADDNSYL 211 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 YA N P V + I + +APA+ +G+ ++ WT++ + + G Sbjct: 212 YAWVKKN--PKYVVGIKSIGPRQYVAPAVKKGNRS---LLKWTNHEITKLTKEG 260 >gi|107022690|ref|YP_621017.1| extracellular solute-binding protein [Burkholderia cenocepacia AU 1054] gi|116689639|ref|YP_835262.1| extracellular solute-binding protein [Burkholderia cenocepacia HI2424] gi|170732941|ref|YP_001764888.1| extracellular solute-binding protein [Burkholderia cenocepacia MC0-3] gi|254245482|ref|ZP_04938803.1| Extracellular solute-binding protein, family 13 [Burkholderia cenocepacia PC184] gi|105892879|gb|ABF76044.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia AU 1054] gi|116647728|gb|ABK08369.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia HI2424] gi|124870258|gb|EAY61974.1| Extracellular solute-binding protein, family 13 [Burkholderia cenocepacia PC184] gi|169816183|gb|ACA90766.1| extracellular solute-binding protein family 3 [Burkholderia cenocepacia MC0-3] Length = 271 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 73/242 (30%), Positives = 108/242 (44%), Gaps = 23/242 (9%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRAL 67 L + L +A L DIKK G L+ + G+ + K+N G DVD+ +AL Sbjct: 10 LVGVALVTAGTVAHADRLDDIKKAGVLRVATFDSNPPFGYVDAKSN-HIVGLDVDYAKAL 68 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD-G 126 + + K+Q P N R L S ++D++ N +T+ E + + F I YF G Sbjct: 69 ADKL---GVKLQLQPTNPANRIPFLTSGKVDLVLAN--FTITDERAKQVDFS-IPYFSSG 122 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF-KAHNMKYH--PIVFERVEEID 183 Q F + KK + S QL+G + GTT E+TL + F KA + Y P F Sbjct: 123 QQF-LAKKGVLKSADQLNGLRVGADKGTTNEITLREKFPKATIVAYDDTPFAF------- 174 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI-ISKSPLAPAIIQGDTEWYNIVS 242 AA RA A T D L L L N ++ +P IS + + +G+T V+ Sbjct: 175 AALRAGNVQAITQDGPKLIGL-LANVPDKQNYEIPAFTISNDYMGVGVPKGETRLLGFVN 233 Query: 243 WT 244 T Sbjct: 234 DT 235 >gi|209516854|ref|ZP_03265704.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] gi|209502670|gb|EEA02676.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] Length = 272 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 69/244 (28%), Positives = 103/244 (42%), Gaps = 19/244 (7%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDF 63 FV + +L S +A L DIKK G L+ + GF + K N G DVD+ Sbjct: 5 FVGAAVMGLLLAFSGVAHADRLDDIKKAGVLRVATFDSNAPFGFVDPKTN-QIVGLDVDY 63 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 RA+++ + K++ P N R L+S ++D++ N +T+ E + F + Sbjct: 64 ARAVANKLG---VKLEIQPTNPANRIAFLKSGKVDLVFAN--FTITDERRKEVDFSTPYF 118 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL-ADYFKAHNMKYH--PIVFERVE 180 G FI KK + S QL+ + GTT E + A + A + Y P F Sbjct: 119 ASGTQFIA-KKGVLKSAQQLNNLRVGADKGTTNEQQVRAQFPNATIVAYDDTPFAF---- 173 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 AA RA A T D L AL + + I P IS + +G+T N+ Sbjct: 174 ---AALRAGNVQAITQDGPKLVALLANVPDKANYEIPPFTISNDYEGVGVPKGETRLLNV 230 Query: 241 VSWT 244 V T Sbjct: 231 VDDT 234 >gi|172060589|ref|YP_001808241.1| extracellular solute-binding protein [Burkholderia ambifaria MC40-6] gi|171993106|gb|ACB64025.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MC40-6] Length = 292 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 72/228 (31%), Positives = 102/228 (44%), Gaps = 21/228 (9%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 +A L DIKK G L+ F V A N G DVD+ +AL+ + K+Q Sbjct: 44 HADRLDDIKKAGVLRVATFDSNPPFGYVDAKNNHIVGLDVDYAKALADKL---GVKLQLQ 100 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD-GQGFIMHKKKGISSV 140 P N R L S ++D++ N +T+ E + + F I YF GQ F + KK + S Sbjct: 101 PTNPANRIPFLTSGKVDLVLAN--FTITDERAKQVDFS-IPYFSSGQQF-LAKKGVLKSA 156 Query: 141 SQLSGASICVQAGTTTELTLADYF-KAHNMKYH--PIVFERVEEIDAAYRAHRCDAYTGD 197 QL+G + GTT E+TL + F KA + Y P F AA RA A T D Sbjct: 157 DQLNGLRVGADKGTTNEITLREKFPKATIVAYDDTPFAF-------AALRAGNVQAITQD 209 Query: 198 ISALYALKLTNDRPSEHVILPDI-ISKSPLAPAIIQGDTEWYNIVSWT 244 L L L N ++ +P IS + + +G+T V+ T Sbjct: 210 GPKLIGL-LANVPDKQNYEIPAFTISNDYMGVGVPKGETRLLGFVNDT 256 >gi|322373492|ref|ZP_08048028.1| CjaA protein [Streptococcus sp. C150] gi|321278534|gb|EFX55603.1| CjaA protein [Streptococcus sp. C150] Length = 284 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 57/237 (24%), Positives = 106/237 (44%), Gaps = 21/237 (8%) Query: 11 CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70 C + A + +IKK G L+ + F V + G ++G+D++ L+ Sbjct: 23 CSSNSSSGKSTAKARTIAEIKKSGELRIAVFADKKPFGYVDSKGAYQGYDIELGNRLAKD 82 Query: 71 IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQG 128 + P +Y+ ++A R L S ++DI N T R ++ L + ++ G Sbjct: 83 LGVKP---KYVSVDAANRAEFLISNKVDITLANFTVTDERKKQVDFALPYMKVSI----G 135 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 + K K I V +L G ++ V GTT E YF+ + Y I ++ ++ AY+A Sbjct: 136 VVSPKDKVIKDVKELEGKTLIVTKGTTAET----YFEKN---YPNIKLQKYDQYSDAYQA 188 Query: 189 ---HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 R DA++ D + + A L N V + + + +APA+ +G+ E + ++ Sbjct: 189 LLDGRGDAFSTDNTEVLAWALEN--KGYEVGITSLGAPDTIAPAVQKGNKELLDFIN 243 >gi|304415625|ref|ZP_07396229.1| polar amino acid ABC transporter periplasmic amino acid-binding subunit [Candidatus Regiella insecticola LSR1] gi|304282523|gb|EFL91082.1| polar amino acid ABC transporter periplasmic amino acid-binding subunit [Candidatus Regiella insecticola LSR1] Length = 275 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 67/259 (25%), Positives = 118/259 (45%), Gaps = 29/259 (11%) Query: 13 IILFFTSF-----STNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCR 65 I LFFTS + N L IKK G ++ + + G+ + + N G+DVD Sbjct: 8 ITLFFTSLLIASCTPNTDKLDAIKKEGVIRIAVFDSNPPFGYVDSQTN-KLVGYDVDIAN 66 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 AL++A+ K++ N R LQSK++D+++ N +T+ E + + F + Sbjct: 67 ALANAL---GVKLELRATNPANRIALLQSKKVDLIAAN--FTITDERAKEVDFSVPYFAT 121 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF-KAHNMKYH--PIVFERVEEI 182 GQ FI +K + + ++ I GT E+TL +++ A + Y P+ F Sbjct: 122 GQKFIA-RKGVLKTAEDINNLRIGADKGTVQEITLREHYPTAKVISYDDTPLAF------ 174 Query: 183 DAAYRAHRCDAYTGDISALYAL--KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A R A T D S L L ++N++ ++ I P I+K A+ +G+ + Sbjct: 175 -VALRNGNVQAITQDDSKLIGLLGNISNEQKADFEISPFSITKEYQGVAVAKGEKR---L 230 Query: 241 VSWTHYAMVTAEELGITQK 259 + + A++ E+ G K Sbjct: 231 IDAINVALIKLEQEGDAAK 249 >gi|293375607|ref|ZP_06621881.1| bacterial extracellular solute-binding protein, family 3 [Turicibacter sanguinis PC909] gi|292645824|gb|EFF63860.1| bacterial extracellular solute-binding protein, family 3 [Turicibacter sanguinis PC909] Length = 279 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 61/236 (25%), Positives = 111/236 (47%), Gaps = 21/236 (8%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 + A + +I++ G + G+ + F V +NGD++G+DV F ++ D +++Y+ Sbjct: 29 SEARSIEEIQESGKIIIGVFSDKKPFGYVDSNGDYQGYDVYFGNRIAQ---DLGVEVEYV 85 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKKGISS 139 P+ A R L S ++DI+ N T R ++ L + + G + I+ Sbjct: 86 PVEAASRVEYLVSNKVDIILANFTVTEERKEKVDFTLPYMKVAL----GVVSPDDALITD 141 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 V QL+G ++ V GTT E YF + + + F++ E A R DA + D + Sbjct: 142 VEQLNGKTLIVSKGTTAET----YFTENYPNVNLLKFDQYSEAYNALLDGRGDALSTDNT 197 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + A L N+ S V + + S +A A+ +G+ E ++ W + +V ELG Sbjct: 198 EVLAWALENEGFS--VGVESLGSIDTIAAAVQKGNDE---LLEWLNNEIV---ELG 245 >gi|291279627|ref|YP_003496462.1| polar amino acid ABC transporter substrate-binding protein [Deferribacter desulfuricans SSM1] gi|290754329|dbj|BAI80706.1| polar amino acid ABC transporter, substrate-binding protein [Deferribacter desulfuricans SSM1] Length = 266 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 71/258 (27%), Positives = 122/258 (47%), Gaps = 25/258 (9%) Query: 5 FFVSILCLIILFF----TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 F +L L+I+F TSF+T S L + K+G LK G++T V +A NG+ GF+ Sbjct: 3 FLKKLLFLMIIFAFVAQTSFATE-STLDKVLKKGVLKVGMST-FVPWAMYDKNGNLIGFE 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + L+ D KI+++P AL + + DI+ T R + + + P Sbjct: 61 IDVAKRLAK---DMGVKIEFVPTKWSGIIPALLTGKFDIIIGGMSITPQRALKVNFSI-P 116 Query: 121 ITYFDGQGFIMHK--KKGISSVSQLSGAS--ICVQAGTTTELTLADYFKAHNMKYHPIVF 176 Y G + +K KG + +S + + I V+ GTT E+ +F +K Sbjct: 117 YDY-SGMSIVANKFKAKGWNKLSDFNKKNVIIAVRIGTTAEVASKRFFPNAKIKLFDDES 175 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE-HVILPDIISKSPLAPAIIQGDT 235 + ++E+ RAH A + + A A+ + P ++ + D +K P+ A+ +GD Sbjct: 176 QAIQELLLG-RAHAVVA-SAPMPAFQAI----EHPDRLYLPIKDTFTKEPIGFAVRKGDY 229 Query: 236 EWYNIV-SWTHYAMVTAE 252 ++ N + SW Y V AE Sbjct: 230 DFLNFLNSWIRY--VKAE 245 >gi|296134850|ref|YP_003642092.1| extracellular solute-binding protein family 3 [Thiomonas intermedia K12] gi|295794972|gb|ADG29762.1| extracellular solute-binding protein family 3 [Thiomonas intermedia K12] Length = 297 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 55/233 (23%), Positives = 105/233 (45%), Gaps = 8/233 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD---PS-KIQYLP 82 L +K+ + G + F+ + NG G+ ++ C + A+ D P K+ Y P Sbjct: 28 LKKVKETNSITVGYRESSIPFSYLDNNGKPIGYAMELCGKVVDAVKADLKMPGLKVNYTP 87 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + + R L++ ID+ +T ++ R+ + AF P + + K GIS +Q Sbjct: 88 VTSSNRIPLLENGTIDLECGSTTNSVARQKQV--AFGPTYFVINVTAAVKKDSGISDFAQ 145 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+G +I +GTT L Y K +M++ I + E R A+ D L Sbjct: 146 LAGKTIVTTSGTTAVPLLKKYEKTKDMEFKEIYGKDHAESFLLMADGRAAAFVMD-DILL 204 Query: 203 ALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 A ++ N + P+ + ILP + + P + + + D ++ +V T ++ + E+ Sbjct: 205 AGQIANSKDPAAYKILPGSLRQEPYSMMLRKDDPQFKALVDKTIDGVMKSGEI 257 >gi|218895694|ref|YP_002444105.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus G9842] gi|228899325|ref|ZP_04063588.1| hypothetical protein bthur0014_5490 [Bacillus thuringiensis IBL 4222] gi|228963737|ref|ZP_04124879.1| hypothetical protein bthur0004_6060 [Bacillus thuringiensis serovar sotto str. T04001] gi|218544001|gb|ACK96395.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus G9842] gi|228795973|gb|EEM43439.1| hypothetical protein bthur0004_6060 [Bacillus thuringiensis serovar sotto str. T04001] gi|228860356|gb|EEN04753.1| hypothetical protein bthur0014_5490 [Bacillus thuringiensis IBL 4222] Length = 276 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 13/207 (6%) Query: 30 IKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 IKKRG L G+ +T L G + G +GFDVD +AL+ I D K++ + +K Sbjct: 45 IKKRGKLVVGVKNDTNLFGLKN-PSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKT 103 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGA 146 R L++ ID + T+ E + F + + GQ ++ K I S+ + G Sbjct: 104 RIPMLKNGDIDAIIAT--MTITEERKKEVDFSDVYFKAGQSLLVKKGSNIKSIDDIKQGV 161 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 + G+T+ + + + + + FE E A +A + D T D + LY + Sbjct: 162 KVLAVKGSTS----TNNIRQKSPEATVLEFENYSEAFTALKAGKGDVLTTDNAILYGMA- 216 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQG 233 + S + ++ I + P A+ +G Sbjct: 217 --KQDSNYEVVGKIFTDEPYGIAVQKG 241 >gi|161507579|ref|YP_001577533.1| amino acid ABC transporter substrate-binding protein [Lactobacillus helveticus DPC 4571] gi|260101514|ref|ZP_05751751.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus helveticus DSM 20075] gi|300812411|ref|ZP_07092841.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|160348568|gb|ABX27242.1| amino acid ABC transporter substrate-binding protein [Lactobacillus helveticus DPC 4571] gi|260084657|gb|EEW68777.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus helveticus DSM 20075] gi|300496578|gb|EFK31670.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|323466463|gb|ADX70150.1| Amino acid ABC transporter substrate-binding protein [Lactobacillus helveticus H10] gi|328466385|gb|EGF37537.1| amino acid ABC transporter substrate-binding protein [Lactobacillus helveticus MTCC 5463] Length = 286 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 62/234 (26%), Positives = 105/234 (44%), Gaps = 15/234 (6%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 +N + + +IK+RG+++ + L + V G G+DV R ++ D KI+++ Sbjct: 42 SNENGVSEIKRRGYIRVAVFGDLPPYGWVNDQGKRVGYDVYLARRIAK---DLNVKIRFI 98 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 +NA R L S + DI+ N T R+ + A +P G I K I+S Sbjct: 99 QVNANNRVDTLNSNKADIVLANFTVTPERKDVVDFA-KPYMKVS-VGVISPKNAPINSAQ 156 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 +L G + V GTT E +YF A + + F+ + A + R A D S L Sbjct: 157 ELKGKKLIVTKGTTAE----NYF-AKQSGVNLLKFDSKTQQFNALKNGRGAALADDNSYL 211 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 YA N P V + I + +APA+ +G+ ++ WT++ + + G Sbjct: 212 YAWVKKN--PKYVVGIKSIGPRQYVAPAVKKGNRS---LLKWTNHEITKLTKEG 260 >gi|313123646|ref|YP_004033905.1| amino acid ABC transporter substrate-binding protein [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280209|gb|ADQ60928.1| Amino acid ABC transporter substrate-binding protein [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 286 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 62/234 (26%), Positives = 105/234 (44%), Gaps = 15/234 (6%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 +N + + +IK+RG+++ + L + V G G+DV R ++ D KI+++ Sbjct: 42 SNENGVSEIKRRGYIRVAVFGDLPPYGWVNDQGKRVGYDVYLVRRIAK---DLNVKIRFI 98 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 +NA R L S + DI+ N T R+ + A +P G I K I+S Sbjct: 99 QVNANNRVDTLNSNKADIVLANFTVTPERKDVVDFA-KPYMKVS-VGVISPKNAPINSAQ 156 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 +L G + V GTT E +YF A + + F+ + A + R A D S L Sbjct: 157 ELKGKKLIVTKGTTAE----NYF-AKQSGVNLLKFDSKTQQFNALKNGRGAALADDNSYL 211 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 YA N P V + I + +APA+ +G+ ++ WT++ + + G Sbjct: 212 YAWVKKN--PKYVVGIKSIGPRQYVAPAVKKGNRS---LLKWTNHEITKLTKEG 260 >gi|228937878|ref|ZP_04100506.1| hypothetical protein bthur0008_5540 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228977334|ref|ZP_04137729.1| hypothetical protein bthur0002_5490 [Bacillus thuringiensis Bt407] gi|228782311|gb|EEM30494.1| hypothetical protein bthur0002_5490 [Bacillus thuringiensis Bt407] gi|228821784|gb|EEM67784.1| hypothetical protein bthur0008_5540 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326938356|gb|AEA14252.1| glutamine-binding protein [Bacillus thuringiensis serovar chinensis CT-43] Length = 276 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 13/207 (6%) Query: 30 IKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 IKKRG L G+ +T L G + G +GFDVD +AL+ I D K++ + +K Sbjct: 45 IKKRGKLVVGVKNDTNLFGLKN-PSTGQVEGFDVDIAKALAKKILGDEKKLELKEVTSKT 103 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGA 146 R L++ ID + T+ E + F + + GQ ++ K I S+ + G Sbjct: 104 RIPLLKNGDIDAIIAT--MTITEERKKEVDFSDVYFKAGQSLLVKKGSNIKSIDDIKQGV 161 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 + G+T+ + + + + + FE E A +A + D T D + LY + Sbjct: 162 KVLAVKGSTS----TNNIRQKSPEATVLEFENYSEAFTALKAGKGDVLTTDNAILYGMA- 216 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQG 233 + S + ++ I + P A+ +G Sbjct: 217 --KQDSNYEVVGKIFTDEPYGIAVQKG 241 >gi|227819409|ref|YP_002823380.1| ABC transporter substrate-binding protein [Sinorhizobium fredii NGR234] gi|227338408|gb|ACP22627.1| putative substrate-binding component of ABC transporter [Sinorhizobium fredii NGR234] Length = 298 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 61/251 (24%), Positives = 105/251 (41%), Gaps = 5/251 (1%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 +S L ++ RG L G + + A +GFDVD R ++ A+F DP KI+Y+ Sbjct: 45 SSKLDEVLARGHLILGTGSTNAPWHFKSAEDKLQGFDVDMGRIIAKALFGDPDKIEYVNQ 104 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 ++ R + + ++D+ + T+ E + +AF Y +G G +M + + L Sbjct: 105 SSDARIPNITTDKVDLTCQFM--TVTGERAQQIAFTIPYYREGVGLMMKADGKYADYAAL 162 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 A V + D A + +E V+ I A + R DA D S+L A Sbjct: 163 KAAGSSVTISVLQNVYAEDMVHAALPEATVDQYESVDLIYQALESGRADAAATDQSSL-A 221 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 +T + P + + A + +GD +W N V+ + +T E K+ Sbjct: 222 WYMTQN-PGRYKDAGYGWNPQTYACGVKRGDQDWLNFVNTALHEAMTGVEFDFYAKSFKT 280 Query: 264 -VSKDTTNPDV 273 KD T P + Sbjct: 281 WFGKDLTPPQI 291 >gi|228970759|ref|ZP_04131399.1| hypothetical protein bthur0003_5460 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228788884|gb|EEM36823.1| hypothetical protein bthur0003_5460 [Bacillus thuringiensis serovar thuringiensis str. T01001] Length = 273 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 13/207 (6%) Query: 30 IKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 IKKRG L G+ +T L G + G +GFDVD +AL+ I D K++ + +K Sbjct: 42 IKKRGKLVVGVKNDTNLFGLKN-PSTGQVEGFDVDIAKALAKKILGDEKKLELKEVTSKT 100 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGA 146 R L++ ID + T+ E + F + + GQ ++ K I S+ + G Sbjct: 101 RIPLLKNGDIDAIIAT--MTITEERKKEVDFSDVYFKAGQSLLVKKGSNIKSIDDIKQGV 158 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 + G+T+ + + + + + FE E A +A + D T D + LY + Sbjct: 159 KVLAVKGSTS----TNNIRQKSPEATVLEFENYSEAFTALKAGKGDVLTTDNAILYGMA- 213 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQG 233 + S + ++ I + P A+ +G Sbjct: 214 --KQDSNYEVVGKIFTDEPYGIAVQKG 238 >gi|325686267|gb|EGD28309.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 286 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 62/234 (26%), Positives = 105/234 (44%), Gaps = 15/234 (6%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 +N + + +IK+RG+++ + L + V G G+DV R ++ D KI+++ Sbjct: 42 SNENGVSEIKRRGYIRVAVFGDLPPYGWVNDQGKRVGYDVYLARRIAK---DLNVKIRFI 98 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 +NA R L S + DI+ N T R+ + A +P G I K I+S Sbjct: 99 QVNANNRVDTLNSNKADIVLANFTVTPERKDVVDFA-KPYMKVS-VGVISPKNAPINSAQ 156 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 +L G + V GTT E +YF A + + F+ + A + R A D S L Sbjct: 157 ELKGKKLIVTKGTTAE----NYF-AKQSGVNLLKFDSKTQQFNALKNGRGAALADDNSYL 211 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 YA N P V + I + +APA+ +G+ ++ WT++ + + G Sbjct: 212 YAWVKKN--PKYVVGIKSIGPRQYVAPAVKKGNRS---LLKWTNHEITKLTKEG 260 >gi|111020803|ref|YP_703775.1| glutamine ABC transporter substrate-binding protein [Rhodococcus jostii RHA1] gi|110820333|gb|ABG95617.1| probable ABC glutamine transporter, substrate binding component [Rhodococcus jostii RHA1] Length = 341 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 40/137 (29%), Positives = 69/137 (50%), Gaps = 7/137 (5%) Query: 27 LGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 L I RG L G+ NT L F + G +GFDVD + ++ IF DP+++++ L Sbjct: 97 LAAIAARGRLIVGVDQNTNLFSFRD-PTTGTLQGFDVDLAKEVARDIFGDPTRVEFRLLT 155 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG-QGFIMHKKKGISSVSQL 143 + RF AL++ ++D++ T T R +G + YF Q ++ + I+ + L Sbjct: 156 SAGRFSALENNEVDVVVHATSITCERARRVGFS---TEYFRAFQRILVPQGSDITGPADL 212 Query: 144 SGASICVQAGTTTELTL 160 +G +C TT+ T+ Sbjct: 213 AGKRVCTFVDTTSLATV 229 >gi|52425739|ref|YP_088876.1| ArtI protein [Mannheimia succiniciproducens MBEL55E] gi|52307791|gb|AAU38291.1| ArtI protein [Mannheimia succiniciproducens MBEL55E] Length = 286 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 12/226 (5%) Query: 19 SFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 S NA S + IKK ++ G+ + F V +G +GFDV+ +A++ + D +K Sbjct: 32 SADNNAVSAIERIKKADKVRIGVFSDKPPFGYVDKDGKVQGFDVEIAKAVTKDLLGDENK 91 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 +++ + A R L S ++DI N T R+ + A +P G + + I Sbjct: 92 AEFVLVEAANRAEYLLSNKVDITMANFTVTPERKEVVNFA-KPYMKV-ALGVVSKQDAPI 149 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + V+QL+ ++ + GTT + YF + K + FE+ E A R DA + D Sbjct: 150 TDVAQLADKTLLLNKGTTADA----YFTKNFPKNKSLKFEQNTETFQALLDGRGDALSHD 205 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 + L+A N P V + ++ +APA+ + DT+ ++ W Sbjct: 206 NTLLFAWAKEN--PGYVVAIKNLGDLDYIAPAVKKEDTD---LLQW 246 >gi|229159720|ref|ZP_04287729.1| hypothetical protein bcere0009_5230 [Bacillus cereus R309803] gi|228623745|gb|EEK80562.1| hypothetical protein bcere0009_5230 [Bacillus cereus R309803] Length = 276 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 13/207 (6%) Query: 30 IKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 IKKRG L G+ +T L G + G +GFDVD +AL+ I D K++ + +K Sbjct: 45 IKKRGKLVVGVKNDTNLFGLKN-PSTGQVEGFDVDIAKALAKKILGDEKKLELKEVTSKT 103 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGA 146 R L++ ID + T+ E + F + + GQ ++ K I S+ + G Sbjct: 104 RIPLLKNGDIDAIIAT--MTITEERKKEVDFSDVYFKAGQSLLVKKGSNIKSIDDIKQGV 161 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 + G+T+ + + + + + FE E A +A + D T D + LY + Sbjct: 162 KVLAVKGSTS----TNNIRQKSPEATVLEFENYSEAFTALKAGKGDVLTTDNAILYGMA- 216 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQG 233 + S + ++ I + P A+ +G Sbjct: 217 --KQDSNYEVVGKIFTDEPYGIAVQKG 241 >gi|167562821|ref|ZP_02355737.1| extracellular solute-binding protein, family 3 [Burkholderia oklahomensis EO147] gi|167570001|ref|ZP_02362875.1| extracellular solute-binding protein, family 3 [Burkholderia oklahomensis C6786] Length = 271 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 73/225 (32%), Positives = 101/225 (44%), Gaps = 23/225 (10%) Query: 27 LGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 L DIKK G L+ + GF + K N G DVD+ +AL+ + K++ P N Sbjct: 27 LDDIKKAGVLRVATFDSNPPFGFVDPKTN-RIVGLDVDYAQALADKLG---VKLKLQPTN 82 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF-DGQGFIMHKKKGISSVSQL 143 R L S ++D++ N +T+ E + + F I YF GQ F + KK + S QL Sbjct: 83 PANRIPFLTSGKVDLVLAN--FTITDERAKQVDFS-IPYFASGQQF-LAKKGVLKSADQL 138 Query: 144 SGASICVQAGTTTELTLAD-YFKAHNMKYH--PIVFERVEEIDAAYRAHRCDAYTGDISA 200 SG I GTT E+TL D Y KA + Y P F AA RA A T D Sbjct: 139 SGLRIGADKGTTNEVTLRDKYPKATIVAYDDTPFAF-------AALRAGNVQAITQDGPK 191 Query: 201 LYALKLTNDRPSEHVILPDI-ISKSPLAPAIIQGDTEWYNIVSWT 244 L L L N ++ +P IS + + +G+T V T Sbjct: 192 LIGL-LANVPDKQNYEIPAFTISNDYMGVGVPKGETRLVAFVDDT 235 >gi|190894703|ref|YP_001984996.1| putative amino acid ABC transporter substrate-binding protein [Rhizobium etli CIAT 652] gi|190700364|gb|ACE94446.1| probable amino acid ABC transporter, substrate-binding protein [Rhizobium etli CIAT 652] Length = 279 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 65/274 (23%), Positives = 117/274 (42%), Gaps = 17/274 (6%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V L + L T + S L ++ RG L G + + A+ +GFDVD Sbjct: 9 VMSLAVAALMSTPALADGSKLDEVLARGHLVLGTGSTNAPWHFKSADDKLQGFDVDMGHI 68 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 ++ A+F DP KI+Y+ ++ R + + ++DI + T+ E + +AF Y +G Sbjct: 69 IAKALFGDPEKIEYVNQSSDARIPNITTDKVDITCQFM--TVTGERAQQVAFTIPYYREG 126 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI---VFERVEEID 183 G ++ + + L AG++ +++ A M + + ++ E +D Sbjct: 127 VGLMLKADGKYADYAALKA------AGSSATISVLQNVYAETMVHAALPEATVDQYESVD 180 Query: 184 AAYRA---HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 Y+A R DA D S+L A +T + P + + A A+ +GD +W N Sbjct: 181 LIYQALESGRADAVATDQSSL-AWYMTQN-PGRYKDAGYGWNPQTYACAVKRGDQDWLNF 238 Query: 241 VSWTHYAMVTAEELGITQKNINQ-VSKDTTNPDV 273 V+ + +T E K+ KD T P + Sbjct: 239 VNTALHEAMTGVEFDFYAKSFKTWFGKDLTPPQI 272 >gi|229154342|ref|ZP_04282462.1| hypothetical protein bcere0010_5420 [Bacillus cereus ATCC 4342] gi|228629166|gb|EEK85873.1| hypothetical protein bcere0010_5420 [Bacillus cereus ATCC 4342] Length = 273 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 62/247 (25%), Positives = 105/247 (42%), Gaps = 26/247 (10%) Query: 3 KDFFVSIL--CLIILFFT--------SFSTNASILG---DIKKRGFLKCGI--NTGLVGF 47 K F I+ CL +L T + TN G IKKRG L G+ +T L G Sbjct: 2 KKLFTLIVFSCLFVLVVTGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFGL 61 Query: 48 AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 62 KN-PSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIAT--MT 118 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 + E + F + + GQ ++ K I S+ + G + G+T+ + + Sbjct: 119 ITEERKKEVDFSDVYFKAGQSLLVKKGSQIKSIDDVKKGVKVLAVKGSTS----TNNIRQ 174 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + + FE E A +A + D T D + LY + + S + ++ I + P Sbjct: 175 KSPEATVLEFENYSEAFTALKAGKGDVLTTDNAILYGM---AKQDSNYEVVGKIFTDEPY 231 Query: 227 APAIIQG 233 A+ +G Sbjct: 232 GIAVQKG 238 >gi|322513416|ref|ZP_08066532.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Actinobacillus ureae ATCC 25976] gi|322120804|gb|EFX92674.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Actinobacillus ureae ATCC 25976] Length = 277 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 51/217 (23%), Positives = 100/217 (46%), Gaps = 10/217 (4%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 + IK G ++ G+ F V ANG +GFDV+ + +++ + P K++++ A Sbjct: 37 VAQIKANGVIRIGVFGDKPPFGYVDANGKSQGFDVEIAKEIANDLLGSPDKVEFVLTEAA 96 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD-GQGFIMHKKKGISSVSQLSG 145 R L+S ++D++ N T R + A Y + G + K I+ + QL G Sbjct: 97 NRVKYLKSNKVDLILANFTKTPERAEVVDFA---APYMNVALGVVSPKGALITDLKQLEG 153 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 ++ V GTT + YF ++ + + + F++ E A + R A D + ++A Sbjct: 154 KTLLVNKGTTGDA----YFTKNHPEINLLKFDQNTETFDALKDGRGVALAHDNALVWAWA 209 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 N P+ V + + +APA+ +G+ +++ Sbjct: 210 KEN--PTFDVAIGSVGLAEQIAPAVQKGNQALLEVIN 244 >gi|294338803|emb|CAZ87137.1| Glutamate/aspartate periplasmic binding protein ABC transporter [Thiomonas sp. 3As] Length = 297 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 54/233 (23%), Positives = 105/233 (45%), Gaps = 8/233 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD---PS-KIQYLP 82 L +K+ + G + F+ + NG G+ ++ C + A+ D P K+ Y P Sbjct: 28 LKKVKETNSITVGYRESSIPFSYLDNNGKPIGYAMELCGKVVDAVKADLKMPGLKVNYTP 87 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + + R L++ ID+ +T ++ R+ + AF P + + K GI+ +Q Sbjct: 88 VTSSNRIPLLENGTIDLECGSTTNSVARQKQV--AFGPTYFVINVTAAVKKDSGINDFAQ 145 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+G +I +GTT L Y K +M++ I + E R A+ D L Sbjct: 146 LAGKTIVTTSGTTAVPLLKKYEKTKDMEFKEIYGKDHAESFLLMADGRASAFVMD-DILL 204 Query: 203 ALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 A ++ N + P+ + ILP + + P + + + D ++ +V T ++ + E+ Sbjct: 205 AGQIANSKDPAAYKILPGSLRQEPYSMMLRKDDPQFKALVDKTIDGVMKSGEI 257 >gi|227903962|ref|ZP_04021767.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus acidophilus ATCC 4796] gi|227868353|gb|EEJ75774.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus acidophilus ATCC 4796] Length = 286 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 61/221 (27%), Positives = 100/221 (45%), Gaps = 15/221 (6%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 +N + + +IK+RG+L+ + L + V +NG G+DV ++ D KI+++ Sbjct: 42 SNQNGVSEIKRRGYLRVAVFGDLPPYGWVNSNGKRVGYDVYLAHRMAQ---DLGVKIRFV 98 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 +NA R L S + DI+ N T R+ + A +P G I K I+S + Sbjct: 99 QVNANNRVDTLNSNKADIILANFTVTPERKDVVDFA-KPYMKV-SVGVISPKSAPITSAN 156 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 QL + V GTT E +YF + + + F+ + A + R A D S L Sbjct: 157 QLKNKKLIVTKGTTAE----NYF-SQQKNVNLLKFDSKTQQFNALKNGRGAALADDNSYL 211 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT---EWYN 239 YA N P V + I K ++PA+ +G+ +W N Sbjct: 212 YAWVKQN--PKYTVGIKSIGPKQYISPAVKKGNRSLLKWIN 250 >gi|311740950|ref|ZP_07714776.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Corynebacterium pseudogenitalium ATCC 33035] gi|311303986|gb|EFQ80063.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Corynebacterium pseudogenitalium ATCC 33035] Length = 337 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 7/138 (5%) Query: 29 DIKKRGFLKCGIN--TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 DI KRG L G++ L+ + + A+GD +GF+VD R ++ IF DP+K+ + + + Sbjct: 86 DIVKRGRLIVGVDRSNNLMSYRDA-ASGDVRGFEVDIAREIARDIFGDPNKVDFRFIESS 144 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG-FIMHKKKGISSVSQLSG 145 +R AL S +D++ R + RE + + I Y Q ++ GI SV +G Sbjct: 145 DRVDALNSGAVDMIVRTMTISPERERDVAFS---IPYMSTQTRMLVLTNSGIKSVKDAAG 201 Query: 146 ASICVQAGTTTELTLADY 163 ++C +T T+ ++ Sbjct: 202 KTLCGVGASTALETIREH 219 >gi|229101400|ref|ZP_04232144.1| hypothetical protein bcere0019_5790 [Bacillus cereus Rock3-28] gi|228682105|gb|EEL36238.1| hypothetical protein bcere0019_5790 [Bacillus cereus Rock3-28] Length = 276 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 13/207 (6%) Query: 30 IKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 IKKRG L G+ +T L G + G +GFDVD +AL+ I D K++ + +K Sbjct: 45 IKKRGKLVVGVKNDTNLFGLKN-PSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKT 103 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGA 146 R L++ ID + T+ E + F + + GQ ++ K I S+ + G Sbjct: 104 RIPMLKNGDIDAIIAT--MTITEERKKEVDFSDVYFKAGQSLLVKKGSNIKSIDDIKQGV 161 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 + G+T+ + + + + + FE E A +A + D T D + LY + Sbjct: 162 KVLAVKGSTS----TNNIRQKSPEATVLEFENYSEAFTALKAGKGDVLTTDNAILYGMA- 216 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQG 233 + + + ++ I + P AI +G Sbjct: 217 --KQDANYEVVGKIFTDEPYGIAIQKG 241 >gi|228983841|ref|ZP_04144036.1| hypothetical protein bthur0001_5580 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228775890|gb|EEM24261.1| hypothetical protein bthur0001_5580 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 276 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 62/247 (25%), Positives = 105/247 (42%), Gaps = 26/247 (10%) Query: 3 KDFFVSIL--CLIILFFT--------SFSTNASILG---DIKKRGFLKCGI--NTGLVGF 47 K F I+ CL +L T + TN G IKKRG L G+ +T L G Sbjct: 5 KKLFTLIVFSCLFVLVVTGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFGL 64 Query: 48 AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 65 KN-PSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIAT--MT 121 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 + E + F + + GQ ++ K I S+ + G + G+T+ + + Sbjct: 122 ITEERKKEVDFSDVYFKAGQSLLVKKGSQIKSIDDVKKGVKVLAVKGSTS----TNNIRQ 177 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + + FE E A +A + D T D + LY + + S + ++ I + P Sbjct: 178 KSPEATVLEFENYSEAFTALKAGKGDVLTTDNAILYGM---AKQDSNYEVVGKIFTDEPY 234 Query: 227 APAIIQG 233 A+ +G Sbjct: 235 GIAVQKG 241 >gi|229056415|ref|ZP_04195828.1| hypothetical protein bcere0026_5420 [Bacillus cereus AH603] gi|228720889|gb|EEL72438.1| hypothetical protein bcere0026_5420 [Bacillus cereus AH603] Length = 259 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 51/207 (24%), Positives = 92/207 (44%), Gaps = 13/207 (6%) Query: 30 IKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 IKKRG L G+ +T L G + G +GFD+D +AL+ I D K++ + +K Sbjct: 28 IKKRGKLVVGVKNDTNLFGLKN-PSTGQVEGFDIDIAKALAKKILGDEKKLELKEVTSKT 86 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGA 146 R L++ ID + T+ E + F + + GQ ++ K I S+ + G Sbjct: 87 RIPMLKNGDIDAIIAT--MTITEERKKEVDFSDVYFKAGQSLLVKKGSNIKSIDDVKQGV 144 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 + G+T+ + + + + + FE E A +A + D T D + LY + Sbjct: 145 KVLAVKGSTS----TNNIRQKSPEATVLEFENYSEAFTALKAGKGDVLTTDNAILYGMA- 199 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQG 233 + S + ++ I + P A+ +G Sbjct: 200 --KQDSNYEVVGKIFTDEPYGIAVQKG 224 >gi|223040121|ref|ZP_03610401.1| acriflavine resistance protein [Campylobacter rectus RM3267] gi|222878598|gb|EEF13699.1| acriflavine resistance protein [Campylobacter rectus RM3267] Length = 278 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 58/241 (24%), Positives = 103/241 (42%), Gaps = 17/241 (7%) Query: 6 FVSILCLIILFFTS--FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 F++I + L + + L IKKRG+++ G+ + F V G +G+D+ F Sbjct: 8 FLAIFAAVFLMDQANVCAAETDALAKIKKRGYVRVGVFSDKPPFGYVDKEGKNQGYDIYF 67 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT--LLREISLGLAFRPI 121 + ++ + D SK+++ + A R L S ++DI N T R + L + + Sbjct: 68 AKRIAKDLLGDESKVKFELVEAASRVEVLVSDKVDITLANFTKTPERTRVVDFALPYMKV 127 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + G + I SV +L G + V GTT + YF ++ + +++ E Sbjct: 128 SL----GVVSPNGAVIKSVDELKGKKLIVNKGTTADA----YFTKNHPDIELVKYDQNTE 179 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT---EWY 238 AA R A D + L+A N P V + + +APA+ + + EW Sbjct: 180 TFAALVDKRGTALAHDNALLFAWAKEN--PGFTVGIEALGEIDVIAPAVKKRNKALLEWL 237 Query: 239 N 239 N Sbjct: 238 N 238 >gi|229010071|ref|ZP_04167285.1| hypothetical protein bmyco0001_5390 [Bacillus mycoides DSM 2048] gi|229165583|ref|ZP_04293358.1| hypothetical protein bcere0007_5650 [Bacillus cereus AH621] gi|228617890|gb|EEK74940.1| hypothetical protein bcere0007_5650 [Bacillus cereus AH621] gi|228751204|gb|EEM01016.1| hypothetical protein bmyco0001_5390 [Bacillus mycoides DSM 2048] Length = 259 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 51/207 (24%), Positives = 92/207 (44%), Gaps = 13/207 (6%) Query: 30 IKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 IKKRG L G+ +T L G + G +GFD+D +AL+ I D K++ + +K Sbjct: 28 IKKRGKLVVGVKNDTNLFGLKN-PSTGQVEGFDIDIAKALAKKILGDEKKLELKEVTSKT 86 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGA 146 R L++ ID + T+ E + F + + GQ ++ K I S+ + G Sbjct: 87 RIPMLKNGDIDAIIAT--MTITEERKKEVDFSDVYFKAGQSLLVKKGSNIKSIDDIKQGV 144 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 + G+T+ + + + + + FE E A +A + D T D + LY + Sbjct: 145 KVLAVKGSTS----TNNIRQKSPEATVLEFENYSEAFTALKAGKGDVLTTDNAILYGMA- 199 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQG 233 + S + ++ I + P A+ +G Sbjct: 200 --KQDSNYEVVGKIFTDEPYGIAVQKG 224 >gi|15900517|ref|NP_345121.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae TIGR4] gi|111656914|ref|ZP_01407738.1| hypothetical protein SpneT_02001841 [Streptococcus pneumoniae TIGR4] gi|149002289|ref|ZP_01827231.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP14-BS69] gi|149021569|ref|ZP_01835624.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP23-BS72] gi|168490505|ref|ZP_02714648.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae CDC0288-04] gi|14972084|gb|AAK74761.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae TIGR4] gi|147759604|gb|EDK66595.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP14-BS69] gi|147930265|gb|EDK81250.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP23-BS72] gi|183574881|gb|EDT95409.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae CDC0288-04] Length = 254 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 45/176 (25%), Positives = 83/176 (47%), Gaps = 6/176 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 + DI+KRG L G+ + F + G + G + D + ++ + KI+Y+P+ A Sbjct: 19 IADIQKRGELVVGVKQDVPNFGYKDPKTGTYSGIETDLAKMVADEL---KVKIRYVPVTA 75 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 + R L ++Q+D+ +T+ E F Y D GF+++K I + L+G Sbjct: 76 QTRGPLLDNEQVDM--DIATFTITDERKKLYNFTSPYYTDASGFLVNKSAKIKKIEDLNG 133 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 +I V G+ T+ + + K +K+ + E+ + AHR D ++ D S L Sbjct: 134 KTIGVAQGSITQRLITELGKKKGLKFKFVELGSYPELITSLHAHRIDTFSVDRSIL 189 >gi|47568091|ref|ZP_00238796.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus G9241] gi|218232444|ref|YP_002365436.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus B4264] gi|229148978|ref|ZP_04277223.1| hypothetical protein bcere0011_5470 [Bacillus cereus m1550] gi|47555245|gb|EAL13591.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus G9241] gi|218160401|gb|ACK60393.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus B4264] gi|228634518|gb|EEK91102.1| hypothetical protein bcere0011_5470 [Bacillus cereus m1550] Length = 276 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 13/207 (6%) Query: 30 IKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 IKKRG L G+ +T L G + G +GFDVD +AL+ I D K++ + +K Sbjct: 45 IKKRGKLVVGVKNDTNLFGLKN-PSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKT 103 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGA 146 R L++ ID + T+ E + F + + GQ ++ K I S+ + G Sbjct: 104 RIPLLKNGDIDAIIAT--MTITEERKKEVDFSDVYFKAGQSLLVKKGSNIKSIDDVKKGV 161 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 + G+T+ + + + + + FE E A +A + D T D + LY + Sbjct: 162 KVLAVKGSTS----TNNIRQKSPEATVLEFENYSEAFTALKAGKGDVLTTDNAILYGMA- 216 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQG 233 + S + ++ I + P A+ +G Sbjct: 217 --KQDSNYEVVGKIFTDEPYGIAVQKG 241 >gi|229015970|ref|ZP_04172931.1| hypothetical protein bcere0030_5530 [Bacillus cereus AH1273] gi|228745330|gb|EEL95371.1| hypothetical protein bcere0030_5530 [Bacillus cereus AH1273] Length = 276 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 13/207 (6%) Query: 30 IKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 IKKRG L G+ +T L G + G +GFDVD +AL+ I D K++ + +K Sbjct: 45 IKKRGKLVVGVKNDTNLFGLKN-PSTGQVEGFDVDIAKALAKKILGDEKKLELKEVTSKT 103 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGA 146 R L++ ID + T+ E + F + + GQ ++ K I S+ + G Sbjct: 104 RIPLLKNGDIDAIIAT--MTITEERKKEVDFSDVYFKAGQSLLVKKGSDIKSIDDVKKGV 161 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 + G+T+ + + + + + FE E A +A + D T D + LY + Sbjct: 162 KVLAVKGSTS----TNNIRQKSPESTVLEFENYSEAFTALKAGKGDVLTTDNAILYGM-- 215 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQG 233 + S + ++ I + P A+ +G Sbjct: 216 -AKQDSNYEVVGKIFTDEPYGIAVQKG 241 >gi|148992284|ref|ZP_01822007.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP9-BS68] gi|168488293|ref|ZP_02712492.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP195] gi|237649852|ref|ZP_04524104.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae CCRI 1974] gi|237821285|ref|ZP_04597130.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae CCRI 1974M2] gi|147928910|gb|EDK79922.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP9-BS68] gi|183573167|gb|EDT93695.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP195] gi|332074415|gb|EGI84891.1| major cell-binding factor [Streptococcus pneumoniae GA17570] Length = 254 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 45/176 (25%), Positives = 83/176 (47%), Gaps = 6/176 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 + DI+KRG L G+ + F + G + G + D + ++ + KI+Y+P+ A Sbjct: 19 IADIQKRGELVVGVKQDVPNFGYKDPKTGTYSGIETDLAKMVADEL---KVKIRYVPVTA 75 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 + R L ++Q+D+ +T+ E F Y D GF+++K I + L+G Sbjct: 76 QTRGPLLDNEQVDM--DIATFTITDERKKLYNFTSPYYTDASGFLVNKSAKIKKIEDLNG 133 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 +I V G+ T+ + + K +K+ + E+ + AHR D ++ D S L Sbjct: 134 KTIGVAQGSITQRLITELGKKKGLKFKFVELGSYPELITSLHAHRIDTFSVDRSIL 189 >gi|23464704|ref|NP_695307.1| solute-binding protein for glutamate/aspartate ABC transporter system [Bifidobacterium longum NCC2705] gi|189438957|ref|YP_001954038.1| amino acid ABC transporter periplasmic protein [Bifidobacterium longum DJO10A] gi|322689597|ref|YP_004209331.1| amino acid ABC transporter substrate-binding protein [Bifidobacterium longum subsp. infantis 157F] gi|23325269|gb|AAN23943.1| probable solute-binding protein for glutamate/aspartate ABC transporter system [Bifidobacterium longum NCC2705] gi|189427392|gb|ACD97540.1| ABC-type amino acid transport system periplasmic component [Bifidobacterium longum DJO10A] gi|291516166|emb|CBK69782.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [Bifidobacterium longum subsp. longum F8] gi|320460933|dbj|BAJ71553.1| amino acid ABC transporter substrate binding component [Bifidobacterium longum subsp. infantis 157F] Length = 300 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 63/232 (27%), Positives = 109/232 (46%), Gaps = 23/232 (9%) Query: 18 TSFSTNASI--LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 TS S NA L +IKK G +K + + F V +G ++G+DV F L+ + +P Sbjct: 45 TSSSANAKARSLDEIKKSGKIKIAVFSDKAPFGYVDKDGKYQGYDVYFAEQLAKDLGVEP 104 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 +Y ++ R L S ++D++ N T R+ + A +P G + + Sbjct: 105 ---EYTSVDPAARVDVLTSNKVDLVLANFTVTDERKEKVDFA-KPYMKV-ALGVVSPESA 159 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFK--AHNMKYHPIVFERVEEIDAAYRA---HR 190 I+ VSQL G ++ + GTT E +F+ A N+K ++ ++ AY A R Sbjct: 160 QITDVSQLDGKTLIIAKGTTAET----WFEKNAPNVK-----LQKYDQYADAYNALLDGR 210 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 DA++ D + + A +N V + + +APA+ +G+TE N V+ Sbjct: 211 GDAFSTDNTEVLAWAKSN--KGFKVGITHLGDDDTIAPAVQKGNTELLNFVN 260 >gi|54027317|ref|YP_121559.1| putative transporter substrate-binding protein [Nocardia farcinica IFM 10152] gi|54018825|dbj|BAD60195.1| putative transporter substrate-binding protein [Nocardia farcinica IFM 10152] Length = 323 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 39/138 (28%), Positives = 68/138 (49%), Gaps = 5/138 (3%) Query: 21 STNASILGDIKKRGFLKCGINTG--LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 +T L I++RG L G++TG L F + G GFD D R ++ + P I Sbjct: 74 ATTGPTLDAIRRRGRLLVGLDTGSNLFSFRD-PITGAVVGFDADIAREIARDLLGSPDLI 132 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 ++ + + +R ALQ + +D++++ T+ E +AF + Q + K GI Sbjct: 133 EFRSMGSADREQALQDRTVDLVAKT--MTITCERRRKVAFSTVYLRADQRVLAMKDSGIR 190 Query: 139 SVSQLSGASICVQAGTTT 156 ++ L+G +CV GTT+ Sbjct: 191 GLADLAGKRVCVVRGTTS 208 >gi|325836784|ref|ZP_08166251.1| ABC transporter, substrate-binding protein, family 3 [Turicibacter sp. HGF1] gi|325491162|gb|EGC93451.1| ABC transporter, substrate-binding protein, family 3 [Turicibacter sp. HGF1] Length = 279 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 67/261 (25%), Positives = 115/261 (44%), Gaps = 37/261 (14%) Query: 13 IILFFTSFSTNASILG----------------DIKKRGFLKCGINTGLVGFAEVKANGDW 56 + L F SF ILG +I++ G + G+ + F V +NGD+ Sbjct: 4 VFLCFMSFLLTLGILGACGESNTSQSEARSIEEIQESGKIIIGVFSDKKPFGYVDSNGDY 63 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR--EISL 114 +G+DV F ++ D +++Y+P+ A R L S ++DI+ N T R ++ Sbjct: 64 QGYDVYFGNRIAQ---DLGVEVEYVPVEAASRVEYLVSNKVDIILANFTVTEERKEKVDF 120 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 L + + G + I+ V QL+G ++ V GTT E YF + + + Sbjct: 121 TLPYMKVAL----GVVSPDDALITDVEQLNGKTLIVSKGTTAET----YFTENYPNVNLL 172 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 F++ E A R DA + D + + A L N S V + + S +A A+ +G+ Sbjct: 173 KFDQYSEAYNALLDGRGDALSTDNTEVLAWALENQGFS--VGVESLGSIDTIAAAVQKGN 230 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 E ++ W + +V ELG Sbjct: 231 DE---LLDWLNNEIV---ELG 245 >gi|255325801|ref|ZP_05366893.1| bacterial extracellular solute-binding protein, family 3 [Corynebacterium tuberculostearicum SK141] gi|255297013|gb|EET76338.1| bacterial extracellular solute-binding protein, family 3 [Corynebacterium tuberculostearicum SK141] Length = 337 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 39/138 (28%), Positives = 71/138 (51%), Gaps = 7/138 (5%) Query: 29 DIKKRGFLKCGIN--TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 DI KRG L G++ L+ + + A GD +GF+VD R ++ IF DP+K+ + + + Sbjct: 86 DIVKRGRLIVGVDRSNNLMSYRDA-ATGDVRGFEVDIAREIARDIFGDPNKVDFRFIESS 144 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG-FIMHKKKGISSVSQLSG 145 +R AL + +D++ R + RE + + I Y + Q ++ GI SV +G Sbjct: 145 DRVNALNTGAVDMIVRTMTISPERERDVAFS---IPYMNTQTRMLVLTNSGIKSVKDAAG 201 Query: 146 ASICVQAGTTTELTLADY 163 ++C +T T+ ++ Sbjct: 202 KTLCGVGASTALETIREH 219 >gi|46190617|ref|ZP_00121269.2| COG0834: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Bifidobacterium longum DJO10A] Length = 280 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 63/232 (27%), Positives = 109/232 (46%), Gaps = 23/232 (9%) Query: 18 TSFSTNASI--LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 TS S NA L +IKK G +K + + F V +G ++G+DV F L+ + +P Sbjct: 25 TSSSANAKARSLDEIKKSGKIKIAVFSDKAPFGYVDKDGKYQGYDVYFAEQLAKDLGVEP 84 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 +Y ++ R L S ++D++ N T R+ + A +P G + + Sbjct: 85 ---EYTSVDPAARVDVLTSNKVDLVLANFTVTDERKEKVDFA-KPYMKV-ALGVVSPESA 139 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFK--AHNMKYHPIVFERVEEIDAAYRA---HR 190 I+ VSQL G ++ + GTT E +F+ A N+K ++ ++ AY A R Sbjct: 140 QITDVSQLDGKTLIIAKGTTAET----WFEKNAPNVK-----LQKYDQYADAYNALLDGR 190 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 DA++ D + + A +N V + + +APA+ +G+TE N V+ Sbjct: 191 GDAFSTDNTEVLAWAKSN--KGFKVGITHLGDDDTIAPAVQKGNTELLNFVN 240 >gi|206978156|ref|ZP_03239038.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus H3081.97] gi|206743628|gb|EDZ55053.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus H3081.97] Length = 276 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 13/207 (6%) Query: 30 IKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 IKKRG L G+ +T L G + G +GFDVD +AL+ I D K++ + +K Sbjct: 45 IKKRGKLVVGVKNDTNLFGLKN-PSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKT 103 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGA 146 R L++ ID + T+ E + F + + GQ ++ K I S+ + G Sbjct: 104 RIPLLKNGDIDAIIAT--MTITEERKKEVDFSDVYFKAGQSLLVKKGSNIKSIDDVKKGV 161 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 + G+T+ + + + + + FE E A +A + D T D + LY + Sbjct: 162 KVLAVKGSTS----TNNIRQKSPEATVLEFENYSEAFTALKAGKGDVLTTDNAILYGM-- 215 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQG 233 + S + ++ I + P A+ +G Sbjct: 216 -AKQDSNYEVVGKIFTDEPYGIAVQKG 241 >gi|296141428|ref|YP_003648671.1| extracellular solute-binding protein family 3 [Tsukamurella paurometabola DSM 20162] gi|296029562|gb|ADG80332.1| extracellular solute-binding protein family 3 [Tsukamurella paurometabola DSM 20162] Length = 326 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 42/135 (31%), Positives = 69/135 (51%), Gaps = 7/135 (5%) Query: 25 SILGDIKKRGFLKCGINTG--LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 + + +I RG L GI+ G L+ F + G+ KGFD D +++AIF DP+++ + Sbjct: 80 TTMAEIFDRGRLVVGIDIGSNLLSFRD-PITGEIKGFDADIAHQIAAAIFGDPNRVHFRI 138 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVS 141 L+ ER AL +D++ + T R + + TYF Q I+ + I++V Sbjct: 139 LSTAERQQALIDGTVDVVVKTMSATCDRAKQVDFS---ATYFIAQQRILAPRGAPINTVG 195 Query: 142 QLSGASICVQAGTTT 156 LSG +C GTT+ Sbjct: 196 DLSGRRVCEVRGTTS 210 >gi|170743518|ref|YP_001772173.1| extracellular solute-binding protein [Methylobacterium sp. 4-46] gi|168197792|gb|ACA19739.1| extracellular solute-binding protein family 3 [Methylobacterium sp. 4-46] Length = 305 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 58/231 (25%), Positives = 94/231 (40%), Gaps = 14/231 (6%) Query: 34 GFLKCGINTGLVGFA---EVKANGDWKGFDVDFCRAL----SSAIFDDPSKIQYLPLNAK 86 G + G T + F+ E + G G+ +D C+ + AI D +I+++P+ ++ Sbjct: 42 GVVAIGYRTSSIPFSFVEEGRGEGRPVGYAIDLCQEIVDEIGRAIGRDDLRIRFVPVTSE 101 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 R AL S +ID+ +T R S+ AF P+T+ ++ + I+S L+G Sbjct: 102 SRIPALLSGEIDLECGSTTANAERRRSV--AFSPVTFVSATTLLVPRGSAIASYRDLAGK 159 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD---ISALYA 203 + V AGTT E L + + E A R R DA+ D +S L A Sbjct: 160 RVVVTAGTTNETALRALLARLRLDAQVLTGRDHAESFALLREGRADAFALDDVLLSGLIA 219 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 R +LPD +S P + D +V + EL Sbjct: 220 AAGEAGR--GFTVLPDKLSFEPYGIMFRKDDPALAGVVDAAFARLAGTREL 268 >gi|229022187|ref|ZP_04178737.1| hypothetical protein bcere0029_5500 [Bacillus cereus AH1272] gi|228739118|gb|EEL89564.1| hypothetical protein bcere0029_5500 [Bacillus cereus AH1272] Length = 273 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 13/207 (6%) Query: 30 IKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 IKKRG L G+ +T L G + G +GFDVD +AL+ I D K++ + +K Sbjct: 42 IKKRGKLVVGVKNDTNLFGLKN-PSTGQVEGFDVDIAKALAKKILGDEKKLELKEVTSKT 100 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGA 146 R L++ ID + T+ E + F + + GQ ++ K I S+ + G Sbjct: 101 RIPLLKNGDIDAIIAT--MTITEERKKEVDFSDVYFKAGQSLLVKKGSDIKSIDDVKKGV 158 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 + G+T+ + + + + + FE E A +A + D T D + LY + Sbjct: 159 KVLAVKGSTS----TNNIRQKSPESTVLEFENYSEAFTALKAGKGDVLTTDNAILYGM-- 212 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQG 233 + S + ++ I + P A+ +G Sbjct: 213 -AKQDSNYEVVGKIFTDEPYGIAVQKG 238 >gi|163938563|ref|YP_001643447.1| extracellular solute-binding protein [Bacillus weihenstephanensis KBAB4] gi|229131583|ref|ZP_04260466.1| hypothetical protein bcere0014_5420 [Bacillus cereus BDRD-ST196] gi|163860760|gb|ABY41819.1| extracellular solute-binding protein family 3 [Bacillus weihenstephanensis KBAB4] gi|228651874|gb|EEL07828.1| hypothetical protein bcere0014_5420 [Bacillus cereus BDRD-ST196] Length = 276 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 13/207 (6%) Query: 30 IKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 IKKRG L G+ +T L G + G +GFDVD +AL+ I D K++ + +K Sbjct: 45 IKKRGKLVVGVKNDTNLFGLKN-PSTGQVEGFDVDIAKALAKKILGDEKKLELKEVTSKT 103 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGA 146 R L++ ID + T+ E + F + + GQ ++ K I S+ + G Sbjct: 104 RIPLLKNGDIDAIIAT--MTITEERKKEVDFSDVYFKAGQSLLVKKGSDIKSIDDVKKGV 161 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 + G+T+ + + + + + FE E A +A + D T D + LY + Sbjct: 162 KVLAVKGSTS----TNNIRQKSPESTVLEFENYSEAFTALKAGKGDVLTTDNAILYGM-- 215 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQG 233 + S + ++ I + P A+ +G Sbjct: 216 -AKQDSNYEVVGKIFTDEPYGIAVQKG 241 >gi|118476326|ref|YP_893477.1| ABC transporter periplasmic glutamine-binding protein [Bacillus thuringiensis str. Al Hakam] gi|118415551|gb|ABK83970.1| amino acid ABC transporter substrate-binding protein, PAAT family [Bacillus thuringiensis str. Al Hakam] Length = 276 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 13/207 (6%) Query: 30 IKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 IKKRG L G+ +T L G + G +GFDVD +AL+ I D K++ + +K Sbjct: 45 IKKRGKLVVGVKNDTNLFGLKN-PSTGQVEGFDVDIAKALAKKILGDEKKLELKEVTSKT 103 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGA 146 R L++ ID + T+ E + F + + GQ ++ K I S+ + G Sbjct: 104 RIPLLKNGDIDAIIAT--MTITEERKKEVDFSDVYFKAGQSLLVKKGSDIKSIDDVKKGV 161 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 + G+T+ + + + + + FE E A +A + D T D + LY + Sbjct: 162 KVLAVKGSTS----TNNIRQKSPEATVLEFENYSEAFTALKAGKGDVLTTDNAILYGM-- 215 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQG 233 + S + ++ I + P A+ +G Sbjct: 216 -AKQDSNYEVVGKIFTDEPYGIAVQKG 241 >gi|193077070|gb|ABO11828.2| putative ABC transporter [Acinetobacter baumannii ATCC 17978] Length = 236 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 61/245 (24%), Positives = 109/245 (44%), Gaps = 23/245 (9%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 ++ G+ + F + A G +GFDV+ + ++ + D +K++++ A R L++ Sbjct: 1 MVRIGVFSDKPPFGYLDAQGKNQGFDVEIAKHVAKDLLGDENKVEFVLTEAANRVEYLKA 60 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 ++DI+ N T R+ + A +P G + K I+ V+QL ++ V GT Sbjct: 61 NKVDIIFANFTVTPERKEVVDFA-KPYLKV-ALGVVSPKSHPITDVAQLKDKTLLVNKGT 118 Query: 155 TTELTLADYFKAHNMKYHPIV----FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 T AD F K HP + +E+ E A + R A D L L + Sbjct: 119 T-----ADSF---FTKTHPEIKLQKYEQNTETFDALKDGRGAALAHD--NLLVLAWAKEN 168 Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT----QKNINQVSK 266 P+ V + ++ + +APA+ +GD E N W + + + G+ +K + V Sbjct: 169 PNYTVGITNLGEQDLIAPAVKKGDKELLN---WLNQDLEKLAKEGVIHQAYEKTLKPVYG 225 Query: 267 DTTNP 271 DT NP Sbjct: 226 DTINP 230 >gi|15827074|ref|NP_301337.1| putative glutamine-binding protein [Mycobacterium leprae TN] gi|221229552|ref|YP_002502968.1| putative glutamine-binding protein [Mycobacterium leprae Br4923] gi|13092622|emb|CAC29811.1| putative glutamine-binding protein [Mycobacterium leprae] gi|219932659|emb|CAR70396.1| putative glutamine-binding protein [Mycobacterium leprae Br4923] Length = 326 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 53/213 (24%), Positives = 93/213 (43%), Gaps = 18/213 (8%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTG--LVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 F T +A++ +I+ RG L G+ G L F + G+ GFD+D ++ IF Sbjct: 73 FPTKAEADAAV-AEIRARGRLIVGLEIGSNLFSFRD-PITGEITGFDIDIAGEVARDIFG 130 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG-QGFIMH 132 PS ++Y L+ R ALQ ++DI+ + T R + + Y D Q + Sbjct: 131 TPSHMEYRILSTAARITALQKSEVDIIVKTMTITCKRRKLVNFS---TVYLDAKQRILAP 187 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF--ERVEEIDAAYRAHR 190 + I+ S LS +C+ GTT+ + + PI+ E + A + Sbjct: 188 RDSPITKPSDLSNKRVCMTRGTTS------LHQVSEVVPPPIIVSAENWADCLVAMQQRE 241 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 DA + D + L L + P H++ P++ ++ Sbjct: 242 IDAISTDDAILAG--LVEEDPYLHIVGPNMATQ 272 >gi|229028439|ref|ZP_04184561.1| hypothetical protein bcere0028_5570 [Bacillus cereus AH1271] gi|228732888|gb|EEL83748.1| hypothetical protein bcere0028_5570 [Bacillus cereus AH1271] Length = 275 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 13/207 (6%) Query: 30 IKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 IKKRG L G+ +T L G + G +GFDVD +AL+ I D K++ + +K Sbjct: 45 IKKRGKLVVGVKNDTNLFGLKN-PSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKT 103 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGA 146 R L++ ID + T+ E + F + + GQ ++ K I S+ + G Sbjct: 104 RIPLLKNGDIDAIIAT--MTITEERKKEVDFSDVYFKAGQSLLVKKGSDIKSIDDVKKGV 161 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 + G+T+ + + + + + FE E A +A + D T D + LY + Sbjct: 162 KVLAVKGSTS----TNNIRQKSPEATVLEFENYSEAFTALKAGKGDVLTTDNAILYGM-- 215 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQG 233 + S + ++ I + P A+ +G Sbjct: 216 -AKQDSNYEVVGKIFTDEPYGIAVQKG 241 >gi|217958226|ref|YP_002336772.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus AH187] gi|217064327|gb|ACJ78577.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus AH187] Length = 276 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 13/207 (6%) Query: 30 IKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 IKKRG L G+ +T L G + G +GFDVD +AL+ I D K++ + +K Sbjct: 45 IKKRGKLVVGVKNDTNLFGLKN-PSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKT 103 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGA 146 R L++ ID + T+ E + F + + GQ ++ K I S+ + G Sbjct: 104 RIPLLKNGDIDAIIAT--MTITEERKKEVDFSDVYFKAGQSLLVKKGSDIKSIDDVKKGV 161 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 + G+T+ + + + + + FE E A +A + D T D + LY + Sbjct: 162 KVLAVKGSTS----TNNIRQKSPEATVLEFENYSEAFTALKAGKGDVLTTDNAILYGM-- 215 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQG 233 + S + ++ I + P A+ +G Sbjct: 216 -AKQDSNYEVVGKIFTDEPYGIAVQKG 241 >gi|91778558|ref|YP_553766.1| polar amino acid ABC transporter periplasmic ligand-binding protein [Burkholderia xenovorans LB400] gi|91691218|gb|ABE34416.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia xenovorans LB400] Length = 272 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 62/232 (26%), Positives = 99/232 (42%), Gaps = 13/232 (5%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72 L S + +A L DIKK G L+ + GF + K+N G D+D+ RA+++ + Sbjct: 14 LLVMSAAAHADRLDDIKKAGVLRVAAFDSNPPFGFVDPKSN-QIVGLDIDYARAVANRLG 72 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 K++ P N R L+S ++D++ N T R+ + + I YF + Sbjct: 73 ---VKLEVQPTNPANRIAFLKSGKVDLVFANFTITDDRKKEVDFS---IPYFASGTQFIA 126 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 KK ++S QL+ I GTT E + F + I ++ AA R Sbjct: 127 KKGTLTSPQQLNSLRIGADKGTTNEQQVRAQFPGATI----IAYDDTPFAFAALRTGNVQ 182 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 A T D L AL + + I P IS + +G+T N+V+ T Sbjct: 183 AITQDGPKLVALLAKVPDKANYEIPPFTISNDYEGVGVPKGETRLLNVVNDT 234 >gi|229171423|ref|ZP_04299008.1| hypothetical protein bcere0006_5510 [Bacillus cereus MM3] gi|228612127|gb|EEK69364.1| hypothetical protein bcere0006_5510 [Bacillus cereus MM3] Length = 276 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 13/207 (6%) Query: 30 IKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 IKKRG L G+ +T L G + G +GFDVD +AL+ I D K++ + +K Sbjct: 45 IKKRGKLVVGVKNDTNLFGLKN-PSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKT 103 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGA 146 R L++ ID + T+ E + F + + GQ ++ K I S+ + G Sbjct: 104 RIPLLKNGDIDAIIAT--MTITEERKKEVDFSDVYFKAGQSLLVKKGSDIKSIDDVKKGV 161 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 + G+T+ + + + + + FE E A +A + D T D + LY + Sbjct: 162 KVLAVKGSTS----TNNIRQKSPEATVLEFENYSEAFTALKAGKGDVLTTDNAILYGM-- 215 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQG 233 + S + ++ I + P A+ +G Sbjct: 216 -AKQDSNYEVVGKIFTDEPYGIAVQKG 241 >gi|4154051|emb|CAA22704.1| putative glutamine-binding protein [Mycobacterium leprae] Length = 325 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 53/213 (24%), Positives = 93/213 (43%), Gaps = 18/213 (8%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTG--LVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 F T +A++ +I+ RG L G+ G L F + G+ GFD+D ++ IF Sbjct: 72 FPTKAEADAAV-AEIRARGRLIVGLEIGSNLFSFRD-PITGEITGFDIDIAGEVARDIFG 129 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG-QGFIMH 132 PS ++Y L+ R ALQ ++DI+ + T R + + Y D Q + Sbjct: 130 TPSHMEYRILSTAARITALQKSEVDIIVKTMTITCKRRKLVNFS---TVYLDAKQRILAP 186 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF--ERVEEIDAAYRAHR 190 + I+ S LS +C+ GTT+ + + PI+ E + A + Sbjct: 187 RDSPITKPSDLSNKRVCMTRGTTS------LHQVSEVVPPPIIVSAENWADCLVAMQQRE 240 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 DA + D + L L + P H++ P++ ++ Sbjct: 241 IDAISTDDAILAG--LVEEDPYLHIVGPNMATQ 271 >gi|228913329|ref|ZP_04076962.1| hypothetical protein bthur0012_5720 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228925828|ref|ZP_04088912.1| hypothetical protein bthur0010_5540 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228833843|gb|EEM79396.1| hypothetical protein bthur0010_5540 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228846238|gb|EEM91257.1| hypothetical protein bthur0012_5720 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 276 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 13/207 (6%) Query: 30 IKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 IKKRG L G+ +T L G + G +GFDVD +AL+ I D K++ + +K Sbjct: 45 IKKRGKLVVGVKNDTNLFGLKN-PSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKT 103 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGA 146 R L++ ID + T+ E + F + + GQ ++ K I S+ + G Sbjct: 104 RIPLLKNGDIDAIIAT--MTITEERKKEVDFSDVYFKAGQSLLVKKGSDIKSIDDVKKGV 161 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 + G+T+ + + + + + FE E A +A + D T D + LY + Sbjct: 162 KVLAVKGSTS----TNNIRQKSPEATVLEFENYSEAFTALKAGKGDVLTTDNAILYGM-- 215 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQG 233 + S + ++ I + P A+ +G Sbjct: 216 -AKQDSNYEVVGKIFTDEPYGIAVQKG 241 >gi|229089702|ref|ZP_04220963.1| hypothetical protein bcere0021_5460 [Bacillus cereus Rock3-42] gi|228693601|gb|EEL47303.1| hypothetical protein bcere0021_5460 [Bacillus cereus Rock3-42] Length = 273 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 13/207 (6%) Query: 30 IKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 IKKRG L G+ +T L G + G +GFDVD +AL+ I D K++ + +K Sbjct: 42 IKKRGKLVVGVKNDTNLFGLKN-PSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKT 100 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGA 146 R L++ ID + T+ E + F + + GQ ++ K I S+ + G Sbjct: 101 RIPLLKNGDIDAIIAT--MTITEERKKEVDFSDVYFKAGQSLLVKKGSDIKSIDDVKKGV 158 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 + G+T+ + + + + + FE E A +A + D T D + LY + Sbjct: 159 KVLAVKGSTS----TNNIRQKSPEATVLEFENYSEAFTALKAGKGDVLTTDNAILYGM-- 212 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQG 233 + S + ++ I + P A+ +G Sbjct: 213 -AKQDSNYEVVGKIFTDEPYGIAVQKG 238 >gi|229137440|ref|ZP_04266051.1| hypothetical protein bcere0013_5720 [Bacillus cereus BDRD-ST26] gi|228645998|gb|EEL02221.1| hypothetical protein bcere0013_5720 [Bacillus cereus BDRD-ST26] Length = 273 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 13/207 (6%) Query: 30 IKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 IKKRG L G+ +T L G + G +GFDVD +AL+ I D K++ + +K Sbjct: 42 IKKRGKLVVGVKNDTNLFGLKN-PSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKT 100 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGA 146 R L++ ID + T+ E + F + + GQ ++ K I S+ + G Sbjct: 101 RIPLLKNGDIDAIIAT--MTITEERKKEVDFSDVYFKAGQSLLVKKGSDIKSIDDVKKGV 158 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 + G+T+ + + + + + FE E A +A + D T D + LY + Sbjct: 159 KVLAVKGSTS----TNNIRQKSPEATVLEFENYSEAFTALKAGKGDVLTTDNAILYGM-- 212 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQG 233 + S + ++ I + P A+ +G Sbjct: 213 -AKQDSNYEVVGKIFTDEPYGIAVQKG 238 >gi|222094394|ref|YP_002528453.1| ABC transporter , substrate-binding protein; glutamine-binding protein [Bacillus cereus Q1] gi|229194958|ref|ZP_04321739.1| hypothetical protein bcere0001_5370 [Bacillus cereus m1293] gi|221238451|gb|ACM11161.1| ABC transporter, substrate-binding protein; probable glutamine-binding protein [Bacillus cereus Q1] gi|228588526|gb|EEK46563.1| hypothetical protein bcere0001_5370 [Bacillus cereus m1293] Length = 276 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 13/207 (6%) Query: 30 IKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 IKKRG L G+ +T L G + G +GFDVD +AL+ I D K++ + +K Sbjct: 45 IKKRGKLVVGVKNDTNLFGLKN-PSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKT 103 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGA 146 R L++ ID + T+ E + F + + GQ ++ K I S+ + G Sbjct: 104 RIPLLKNGDIDAIIAT--MTITEERKKEVDFSDVYFKAGQSLLVKKGSDIKSIDDVKKGV 161 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 + G+T+ + + + + + FE E A +A + D T D + LY + Sbjct: 162 KVLAVKGSTS----TNNIRQKSPEATVLEFENYSEAFTALKAGKGDVLTTDNAILYGM-- 215 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQG 233 + S + ++ I + P A+ +G Sbjct: 216 -AKQDSNYEVVGKIFTDEPYGIAVQKG 241 >gi|30260794|ref|NP_843171.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. Ames] gi|47525919|ref|YP_017268.1| amino acid ABC transporter amino acid-binding protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49183632|ref|YP_026884.1| amino acid ABC transporter amino acid-binding protein [Bacillus anthracis str. Sterne] gi|49476850|ref|YP_034898.1| glutamine ABC transporter substrate-binding protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|65318066|ref|ZP_00391025.1| COG0834: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Bacillus anthracis str. A2012] gi|165872945|ref|ZP_02217568.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0488] gi|167635159|ref|ZP_02393475.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0442] gi|167640878|ref|ZP_02399136.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0193] gi|170689027|ref|ZP_02880227.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0465] gi|170708475|ref|ZP_02898917.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0389] gi|177652832|ref|ZP_02935205.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0174] gi|190568524|ref|ZP_03021430.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis Tsiankovskii-I] gi|196035755|ref|ZP_03103158.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus W] gi|196041840|ref|ZP_03109129.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus NVH0597-99] gi|196047174|ref|ZP_03114391.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus 03BB108] gi|218901836|ref|YP_002449670.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus AH820] gi|227816490|ref|YP_002816499.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. CDC 684] gi|228944392|ref|ZP_04106765.1| hypothetical protein bthur0007_5660 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229182974|ref|ZP_04310206.1| hypothetical protein bcere0004_5530 [Bacillus cereus BGSC 6E1] gi|229602354|ref|YP_002865238.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0248] gi|254684283|ref|ZP_05148143.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. CNEVA-9066] gi|254722087|ref|ZP_05183876.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A1055] gi|254738747|ref|ZP_05196450.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. Western North America USA6153] gi|254742041|ref|ZP_05199728.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. Kruger B] gi|254754973|ref|ZP_05207007.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. Vollum] gi|254762296|ref|ZP_05214140.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. Australia 94] gi|30254243|gb|AAP24657.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. Ames] gi|47501067|gb|AAT29743.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49177559|gb|AAT52935.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. Sterne] gi|49328406|gb|AAT59052.1| ABC transporter, substrate-binding protein; probable glutamine-binding protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|164711299|gb|EDR16853.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0488] gi|167511098|gb|EDR86486.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0193] gi|167529418|gb|EDR92169.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0442] gi|170126596|gb|EDS95481.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0389] gi|170667012|gb|EDT17775.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0465] gi|172081866|gb|EDT66935.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0174] gi|190560318|gb|EDV14297.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis Tsiankovskii-I] gi|195991722|gb|EDX55687.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus W] gi|196022044|gb|EDX60734.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus 03BB108] gi|196027334|gb|EDX65952.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus NVH0597-99] gi|218539731|gb|ACK92129.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus AH820] gi|227003893|gb|ACP13636.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. CDC 684] gi|228600431|gb|EEK58019.1| hypothetical protein bcere0004_5530 [Bacillus cereus BGSC 6E1] gi|228815294|gb|EEM61542.1| hypothetical protein bthur0007_5660 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229266762|gb|ACQ48399.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0248] Length = 276 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 13/207 (6%) Query: 30 IKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 IKKRG L G+ +T L G + G +GFDVD +AL+ I D K++ + +K Sbjct: 45 IKKRGKLVVGVKNDTNLFGLKN-PSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKT 103 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGA 146 R L++ ID + T+ E + F + + GQ ++ K I S+ + G Sbjct: 104 RIPLLKNGDIDAIIAT--MTITEERKKEVDFSDVYFKAGQSLLVKKGSDIKSIDDVKKGV 161 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 + G+T+ + + + + + FE E A +A + D T D + LY + Sbjct: 162 KVLAVKGSTS----TNNIRQKSPEATVLEFENYSEAFTALKAGKGDVLTTDNAILYGM-- 215 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQG 233 + S + ++ I + P A+ +G Sbjct: 216 -AKQDSNYEVVGKIFTDEPYGIAVQKG 241 >gi|229074424|ref|ZP_04207456.1| hypothetical protein bcere0024_5440 [Bacillus cereus Rock4-18] gi|228708708|gb|EEL60849.1| hypothetical protein bcere0024_5440 [Bacillus cereus Rock4-18] Length = 276 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 51/207 (24%), Positives = 92/207 (44%), Gaps = 13/207 (6%) Query: 30 IKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 IKKRG L G+ +T L G + G +GFDVD +AL+ I D K++ + +K Sbjct: 45 IKKRGKLVVGVKNDTNLFGLKN-PSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKT 103 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGA 146 R L++ ID + T+ E + F + + GQ ++ K I S+ + G Sbjct: 104 RIPMLKNGDIDAIIAT--MTITEERKKEVDFSDVYFKAGQSLLVKKGSNIKSIDDIKQGV 161 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 + G+T+ + + + + + FE E A +A + D T D + LY + Sbjct: 162 KVLAVKGSTS----TNNIRQKSPEATVLEFENYSEAFTALKAGKGDVLTTDNAILYGMA- 216 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQG 233 + + + ++ I + P A+ +G Sbjct: 217 --KQDANYEVVGKIFTDEPYGIAVQKG 241 >gi|229120290|ref|ZP_04249540.1| hypothetical protein bcere0016_6050 [Bacillus cereus 95/8201] gi|228663100|gb|EEL18690.1| hypothetical protein bcere0016_6050 [Bacillus cereus 95/8201] Length = 276 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 13/207 (6%) Query: 30 IKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 IKKRG L G+ +T L G + G +GFDVD +AL+ I D K++ + +K Sbjct: 45 IKKRGKLVVGVKNDTNLFGLKN-PSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKT 103 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGA 146 R L++ ID + T+ E + F + + GQ ++ K I S+ + G Sbjct: 104 RIPLLKNGDIDAIIAT--MTITEERKKEVDFSDVYFKAGQSLLVKKGSDIKSIDDVKKGV 161 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 + G+T+ + + + + + FE E A +A + D T D + LY + Sbjct: 162 KVLAVKGSTS----TNNIRQKSPEATVLEFENYSEAFTALKAGKGDVLTTDNAILYGM-- 215 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQG 233 + S + ++ I + P A+ +G Sbjct: 216 -AKQDSNYEVVGKIFTDEPYGIAVQKG 241 >gi|218516825|ref|ZP_03513665.1| probable amino acid ABC transporter, substrate-binding protein [Rhizobium etli 8C-3] Length = 279 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 66/282 (23%), Positives = 119/282 (42%), Gaps = 19/282 (6%) Query: 1 MYKDFFVSILCLII--LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M F ++ L+ L T S L ++ RG L G + + A+ +G Sbjct: 1 MTISFRTGVISLVAAALLSTPVLAEGSKLDEVLARGHLVLGTGSTNAPWHFKSADDKLQG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD ++ A+F DP KI+Y+ ++ R + + ++DI + T+ E + +AF Sbjct: 61 FDVDMGHIIAKALFGDPEKIEYVNQSSDARIPNITTDKVDITCQFM--TVTGERAQQVAF 118 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI---V 175 Y +G G ++ + + L AG++ +++ A M + + Sbjct: 119 TIPYYREGVGLMLKADGKYADYAALKA------AGSSATISVLQNVYAETMVHAALPEAT 172 Query: 176 FERVEEIDAAYRA---HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 ++ E +D Y+A R DA D S+L A +T + P + + A A+ + Sbjct: 173 VDQYESVDLIYQALESGRADAVATDQSSL-AWYMTQN-PGRYKDAGYGWNPQTYACAVKR 230 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQ-VSKDTTNPDV 273 GD +W N V+ + +T E K+ KD T P + Sbjct: 231 GDQDWLNFVNTALHEAMTGVEFDFYAKSFKTWFGKDLTPPQI 272 >gi|42779786|ref|NP_977033.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus ATCC 10987] gi|52144672|ref|YP_082157.1| glytamine ABC transporter substrate-binding protein [Bacillus cereus E33L] gi|42735703|gb|AAS39641.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus ATCC 10987] gi|51978141|gb|AAU19691.1| ABC transporter, substrate-binding protein; probable glutamine-binding protein [Bacillus cereus E33L] Length = 276 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 13/207 (6%) Query: 30 IKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 IKKRG L G+ +T L G + G +GFDVD +AL+ I D K++ + +K Sbjct: 45 IKKRGKLVVGVKNDTNLFGLKN-PSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKT 103 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGA 146 R L++ ID + T+ E + F + + GQ ++ K I S+ + G Sbjct: 104 RIPLLKNGDIDAIIAT--MTITEERKKEVDFSDVYFKAGQSLLVKKGSDIKSIDDVKKGV 161 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 + G+T+ + + + + + FE E A +A + D T D + LY + Sbjct: 162 KVLAVKGSTS----TNNIRQKSPEATVLEFENYSEAFTALKAGKGDVLTTDNAILYGM-- 215 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQG 233 + S + ++ I + P A+ +G Sbjct: 216 -AKQDSNYEVVGKIFTDEPYGIAVQKG 241 >gi|317053657|ref|YP_004118791.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b] gi|316952762|gb|ADU72235.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b] Length = 261 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 59/231 (25%), Positives = 99/231 (42%), Gaps = 18/231 (7%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 L L+ L F A+ L DIK RG L+ + A G G DVD + L+ Sbjct: 8 LALVALCALPFLAQANSLDDIKSRGVLRVATTVDAAPWGFTDAAGKPTGLDVDLAQKLAD 67 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDI----LSRNTDWTLLREISLGLAFRPITYFD 125 + K+Q + R L S+++D+ L + + L S A + + Sbjct: 68 NMG---VKLQLQQVTGANRIPYLMSRKVDVLIAALGSSPERAKLVNFSEPYAAVYLGVYG 124 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 G K ++ +S LS A+I V G+T +LTL+D N + + + E +A Sbjct: 125 GSDV-----KKVTKLSDLSNATIAVPKGSTPDLTLSD----QNPQGNYLRLEDTASAVSA 175 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + + + + L A K+ + P++H+ L ++ KSP AI G E Sbjct: 176 FLSGQAPMFAEN--NLIAQKVAQENPAKHIELKYLLRKSPAYIAIRPGQPE 224 >gi|312961374|ref|ZP_07775879.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas fluorescens WH6] gi|311285032|gb|EFQ63608.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas fluorescens WH6] Length = 282 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 54/239 (22%), Positives = 100/239 (41%), Gaps = 4/239 (1%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L + KRG L G + + A+G +GFD+D R ++ +F+DPSK++++ + Sbjct: 30 SKLDSVLKRGHLVVGTGSTNAPWHFQGADGKLQGFDIDIGRIVAKGLFNDPSKVEFVVQS 89 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 + R L + ++D+ + T R + +AF Y +G G ++ + L Sbjct: 90 SDARIPNLLTDKVDMSCQFITVTASR--AQQVAFTLPYYREGVGLLLPNNSKYKEIEDLQ 147 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 A V + + K ++ V+ + A + R DA D S++ L Sbjct: 148 AAGDGVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLMYQAVNSGRADAAATDQSSVKYL 207 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 + N P + S A A+ +GD +W N V+ + +T E + + Q Sbjct: 208 MVQN--PGRYRSPAYAWSPQTYACAVKRGDQDWLNFVNTALHEAMTGVEFPTYKASFKQ 264 >gi|228932067|ref|ZP_04094959.1| hypothetical protein bthur0009_5520 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|301052294|ref|YP_003790505.1| ABC transporter substrate-binding protein [Bacillus anthracis CI] gi|228827650|gb|EEM73392.1| hypothetical protein bthur0009_5520 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|300374463|gb|ADK03367.1| ABC transporter, substrate-binding protein; probable glutamine-binding protein [Bacillus cereus biovar anthracis str. CI] Length = 276 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 13/207 (6%) Query: 30 IKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 IKKRG L G+ +T L G + G +GFDVD +AL+ I D K++ + +K Sbjct: 45 IKKRGKLVVGVKNDTNLFGLKN-PSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKT 103 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGA 146 R L++ ID + T+ E + F + + GQ ++ K I S+ + G Sbjct: 104 RIPLLKNGDIDAIIAT--MTITEERKKEVDFSDVYFKAGQSLLVKKGSDIKSIDDVKKGV 161 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 + G+T+ + + + + + FE E A +A + D T D + LY + Sbjct: 162 KVLAVKGSTS----TNNIRQKSPEATVLEFENYSEAFTALKAGKGDVLTTDNAILYGM-- 215 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQG 233 + S + ++ I + P A+ +G Sbjct: 216 -AKQDSNYEVVGKIFTDEPYGIAVQKG 241 >gi|30018825|ref|NP_830456.1| glutamine-binding protein [Bacillus cereus ATCC 14579] gi|229126071|ref|ZP_04255093.1| hypothetical protein bcere0015_5340 [Bacillus cereus BDRD-Cer4] gi|29894367|gb|AAP07657.1| Glutamine-binding protein [Bacillus cereus ATCC 14579] gi|228657393|gb|EEL13209.1| hypothetical protein bcere0015_5340 [Bacillus cereus BDRD-Cer4] Length = 276 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 13/207 (6%) Query: 30 IKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 IKKRG L G+ +T L G + G +GFDVD +AL+ I D K++ + +K Sbjct: 45 IKKRGKLVVGVKNDTNLFGLKN-PSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKT 103 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGA 146 R L++ ID + T+ E + F + + GQ ++ K I S+ + G Sbjct: 104 RIPLLKNGDIDAIIAT--MTITEERKKEVDFSDVYFKAGQSLLVKKGSEIKSIDDVKKGV 161 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 + G+T+ + + + + + FE E A +A + D T D + LY + Sbjct: 162 KVLAVKGSTS----TNNIRQKSPEATVLEFENYSEAFTALKAGKGDVLTTDNAILYGM-- 215 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQG 233 + S + ++ I + P A+ +G Sbjct: 216 -AKQDSNYEVVGKIFTDEPYGIAVQKG 241 >gi|324324679|gb|ADY19939.1| glytamine ABC transporter substrate-binding protein [Bacillus thuringiensis serovar finitimus YBT-020] Length = 276 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 13/207 (6%) Query: 30 IKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 IKKRG L G+ +T L G + G +GFDVD +AL+ I D K++ + +K Sbjct: 45 IKKRGKLIVGVKNDTNLFGLKN-PSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKT 103 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGA 146 R L++ ID + T+ E + F + + GQ ++ K I S+ + G Sbjct: 104 RIPLLKNGDIDAIIAT--MTITEERKKEVDFSDVYFKAGQSLLVKKGSDIKSIDDVKKGV 161 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 + G+T+ + + + + + FE E A +A + D T D + LY + Sbjct: 162 KVLAVKGSTS----TNNIRQKSPEATVLEFENYSEAFTALKAGKGDVLTTDNAILYGM-- 215 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQG 233 + S + ++ I + P A+ +G Sbjct: 216 -AKQDSNYEVVGKIFTDEPYGIAVQKG 241 >gi|126641445|ref|YP_001084429.1| ArtI protein [Acinetobacter baumannii ATCC 17978] Length = 212 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 54/213 (25%), Positives = 99/213 (46%), Gaps = 11/213 (5%) Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + ++ + D K++++ A R L+S + D++ T R+ + A P Sbjct: 3 LAKRVTKDLLGDEKKVEFIVTEASNRVEFLKSNRADVVFATFTVTPERKEVVDFA-EP-- 59 Query: 123 YFDGQ-GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y G G + K K I+ ++QL G ++ V GT+++ YF H K + + FER + Sbjct: 60 YLKGAFGIVSPKAKPITDIAQLEGKTLIVNKGTSSDT----YFTKHYPKVNLLKFERNSD 115 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A R DA + D + YAL PS + I + +APA+ +G+T+ N + Sbjct: 116 AFKALTDGRGDAISQD--STYALAWAAKNPSYVAGIQSIGDQEFIAPAVKKGNTQLLNWL 173 Query: 242 SWTHYAMVTAEEL-GITQKNINQVSKDTTNPDV 273 + + T+ E+ I + + + D+ NP+V Sbjct: 174 NTEIKQLRTSGEIKKIYDETLKPIYGDSVNPNV 206 >gi|308067189|ref|YP_003868794.1| Glutamine-binding protein precursor (GlnBP) [Paenibacillus polymyxa E681] gi|305856468|gb|ADM68256.1| Glutamine-binding protein precursor (GlnBP) [Paenibacillus polymyxa E681] Length = 276 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 57/252 (22%), Positives = 113/252 (44%), Gaps = 23/252 (9%) Query: 6 FVSILCLIILFFTSFSTNASILGD----------IKKRGFLKCGI--NTGLVGFAEVKAN 53 V++ CL++L A+ G+ IK+RG L G+ +T L G + A+ Sbjct: 12 LVALSCLLVLAGCGGKEGAATSGNEPAAAKGLEAIKQRGKLVVGVKYDTKLFGLKD-PAS 70 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G +GFD+D +A++ IF D +K++ + +K R LQ+ ID + T+ E Sbjct: 71 GKVEGFDIDIAKAVAKHIFGDETKLELKEVTSKTRITLLQNGDIDAIIAT--MTISDERK 128 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSG-ASICVQAGTTTELTLADYFKAHNMKYH 172 + F + + GQ ++ K I+ + L+ + G+T+ A + + Sbjct: 129 KQVDFSDVYFNAGQSLLVKKGSPITGLESLTANTKVLAVKGSTS----AKNIREKAPEAT 184 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + FE ++ A +A + +A T D S L ++ + ++++ ++ P A+ + Sbjct: 185 ILEFENYQDAFNALKAGKGEALTTDNSILLGMQ---KQDPNYILVGGNFTEEPYGIAVKK 241 Query: 233 GDTEWYNIVSWT 244 G E ++ T Sbjct: 242 GQPELLQAINDT 253 >gi|329117390|ref|ZP_08246107.1| bifunctional adhesin/ABC transporter aspartate/glutamate-binding protein [Streptococcus parauberis NCFD 2020] gi|326907795|gb|EGE54709.1| bifunctional adhesin/ABC transporter aspartate/glutamate-binding protein [Streptococcus parauberis NCFD 2020] Length = 271 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 39/173 (22%), Positives = 86/173 (49%), Gaps = 6/173 (3%) Query: 30 IKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 I+K G ++ G+ + F + G ++G +V+ + ++ ++ K ++ + A+ R Sbjct: 40 IQKAGIIRVGVKQDVPNFGYYSPDTGKYEGMEVEIAKDIAKSL---GVKAEFTAVTAQTR 96 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 L + Q+D++ +T+ E +F Y D GF+++K G S+ L+ +I Sbjct: 97 EALLDNGQLDMII--ATYTITPERQANYSFSKPYYLDEVGFLVNKSDGFKSIKSLNNKTI 154 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 V G+TT++ + ++ KA+N+ + + E+ + + R A++ D S L Sbjct: 155 GVAQGSTTKVAIEEFGKANNLHFKFVQLGSYPELAISLYSTRISAFSVDKSIL 207 >gi|229042502|ref|ZP_04190247.1| hypothetical protein bcere0027_5680 [Bacillus cereus AH676] gi|296501400|ref|YP_003663100.1| glutamine-binding protein [Bacillus thuringiensis BMB171] gi|228726855|gb|EEL78067.1| hypothetical protein bcere0027_5680 [Bacillus cereus AH676] gi|296322452|gb|ADH05380.1| glutamine-binding protein [Bacillus thuringiensis BMB171] Length = 276 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 13/207 (6%) Query: 30 IKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 IKKRG L G+ +T L G + G +GFDVD +AL+ I D K++ + +K Sbjct: 45 IKKRGKLVVGVKNDTNLFGLKN-PSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKT 103 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGA 146 R L++ ID + T+ E + F + + GQ ++ K I S+ + G Sbjct: 104 RIPLLKNGDIDAIIAT--MTITEERKKEVDFSDVYFKAGQSLLVKKGSEIKSIDDVKKGV 161 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 + G+T+ + + + + + FE E A +A + D T D + LY + Sbjct: 162 KVLAVKGSTS----TNNIRQKSPEATVLEFENYSEAFTALKAGKGDVLTTDNAILYGM-- 215 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQG 233 + S + ++ I + P A+ +G Sbjct: 216 -AKQDSNYEVVGKIFTDEPYGIAVQKG 241 >gi|134295676|ref|YP_001119411.1| extracellular solute-binding protein [Burkholderia vietnamiensis G4] gi|134138833|gb|ABO54576.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia vietnamiensis G4] Length = 276 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 63/225 (28%), Positives = 99/225 (44%), Gaps = 15/225 (6%) Query: 23 NASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 +A L DIKK G L+ + GF + K++ G DVD+ +AL+ + K+Q Sbjct: 28 HADRLDDIKKAGVLRVATFDSNPPFGFVDAKSH-HIVGLDVDYAKALADKL---GVKLQL 83 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 P N R L S ++D++ N +T+ E + + F I YF + KK + S Sbjct: 84 QPTNPANRIPFLTSGKVDLVLAN--FTITDERAKQVDFS-IPYFSSGQQFLAKKGVLKSA 140 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 QL+G + GTT E+TL D F + + ++ AA RA A T D Sbjct: 141 DQLNGLRVGADKGTTNEITLRDKFPGATI----VAYDDTPFAFAALRAGNVQAITQDGPK 196 Query: 201 LYALKLTNDRPSEHVILPDI-ISKSPLAPAIIQGDTEWYNIVSWT 244 L L L N ++ +P IS + + +G+ V+ T Sbjct: 197 LIGL-LANVPDKQNYEIPAFTISNDYMGVGVPKGEARLLGFVNDT 240 >gi|15891687|ref|NP_357359.1| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|15160141|gb|AAK90144.1| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 297 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 54/226 (23%), Positives = 96/226 (42%), Gaps = 13/226 (5%) Query: 7 VSILCLIILFFTSFST-----NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 +S+ CL + F + L I K ++ G F+ NG+ GF Sbjct: 3 LSVFCLFLTCFAPVTPLQAADEGDTLQQIAKTAKIRIGYREAEPPFSYQLPNGEITGFST 62 Query: 62 DFCRALSSAIFD----DPSKIQYLPLNAKERFLALQSKQIDI-LSRNTDWTLLREISLGL 116 D CRA+S I D +++Y+ RF+ ++S QIDI + T+ + R+I + Sbjct: 63 DLCRAISEDIRSKLKLDKIELEYVKATPATRFILVRSGQIDIECAATTNNSERRKI---V 119 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F + F+ K+ + S++ L+G S+ +GT L +A N+ + Sbjct: 120 DFSYPNFMTATQFLSRKQDNLKSLADLAGRSVTSASGTVNIEQLNAVNRAKNLNISVMPT 179 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222 + EE A + A+ D L AL T++ P + + + +S Sbjct: 180 KTNEEAFDLVVAGKASAFVMDGILLAALAATSENPDLYALSEETLS 225 >gi|225854142|ref|YP_002735654.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae JJA] gi|225722741|gb|ACO18594.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae JJA] Length = 254 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 47/178 (26%), Positives = 85/178 (47%), Gaps = 10/178 (5%) Query: 27 LGDIKKRGFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 + DI+KRG L G+ + F + G + G + D + ++ + KI+Y+P+ A Sbjct: 19 IADIQKRGELVVGVKQDVPNFGYKDPKTGTYSGIETDLAKMVADEL---KVKIRYVPVTA 75 Query: 86 KERFLALQSKQ--IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 + R L ++Q +DI + +T+ E F Y D GF+++K I + L Sbjct: 76 QTRGPLLDNEQGDMDIAT----FTITDERKKLYNFTSPYYTDASGFLVNKSAKIKKIEDL 131 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 +G +I V G+ T+ + + K +K+ + E+ + AHR DA++ D S L Sbjct: 132 NGKTIGVAQGSITQRLITELGKKKGLKFKFVELGSYPELITSLHAHRIDAFSVDRSIL 189 >gi|257461100|ref|ZP_05626198.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] gi|257441474|gb|EEV16619.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] Length = 267 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 67/236 (28%), Positives = 108/236 (45%), Gaps = 16/236 (6%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 I+ ++L S +N L IK++G ++ GI+ F+ V +G + GF++ L Sbjct: 4 IILALMLAVCSLLSNT--LTQIKEKGVIRIGIDGSSPPFS-VAKDGGYSGFEILLIEGLV 60 Query: 69 SAIFDDP-SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 IF D SKIQY+ +R A+Q ++D+ T RE + + P YF Sbjct: 61 KEIFGDKGSKIQYVVTVGDDRIKAVQDNRVDLDIALISVTKEREKLVDFS-DP--YFSVN 117 Query: 128 -GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 G + I VS L+G +I Q GT T+ DYF Y+ + E Sbjct: 118 IGVLTRSDDNIRKVSDLNGKTILAQPGT----TVFDYFTKQG--YNVVPCASANECFNDL 171 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 ++ + D Y D ++A + DR E V + ++ S LA A+ +G+TE N V+ Sbjct: 172 KSGKGDGYGDDNLLVFAYAVV-DRKVE-VNIKNLGSTDFLAIAVQKGNTELLNAVN 225 >gi|319405905|emb|CBI79537.1| amino-acid ABC transporter binding protein [Bartonella sp. AR 15-3] Length = 301 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 58/230 (25%), Positives = 98/230 (42%), Gaps = 9/230 (3%) Query: 3 KDFFVSILCLIILFFTSFS--TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + F+ + I + TS + TN + L IK+ G + G+ G A NG + GF Sbjct: 2 RKLFLIFIAAIFMGLTSIAHATNDT-LEKIKRTGEITLGVRES-SGLAYALGNGKYTGFH 59 Query: 61 VDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 + + + I P K+ YLP+ ++ R L++ D +T R + A Sbjct: 60 TEMAEHIINDISKKIGQPIKVNYLPITSQNRIPLLKNGTYDFECGSTTNDSARNKEVAFA 119 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + TY + + K GI S+ L+G + GTT + + N+ + + + Sbjct: 120 Y--TTYVETVKIAVKKNSGIKSIDDLNGKKVATTTGTTAVQLIRKNKRQKNIHFQVVNGK 177 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 E + R DA+ DIS L A + PS++VIL +S P+A Sbjct: 178 DHGESFLLLESGRADAFVMDISILSANIAKSKNPSDYVILDTTLSVEPIA 227 >gi|296119013|ref|ZP_06837586.1| amino acid ABC transporter, amino acid-binding protein [Corynebacterium ammoniagenes DSM 20306] gi|295968111|gb|EFG81363.1| amino acid ABC transporter, amino acid-binding protein [Corynebacterium ammoniagenes DSM 20306] Length = 356 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 40/143 (27%), Positives = 73/143 (51%), Gaps = 5/143 (3%) Query: 29 DIKKRGFLKCGINTG--LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 +I +RG L G++ L+ + + A G+ +GF+VD ++ IF D +++ + L + Sbjct: 102 NIIERGRLIVGVDQSHNLLSYRDA-ATGELRGFEVDLAHEIAEDIFGDRNRVDFRFLESA 160 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 ER AL + +DI+ R T RE + + +P D + ++ GI+SV Q SG Sbjct: 161 ERTRALANGTVDIVIRTMTITPDREKEIAFS-QPYMITDTRMLVL-TSSGITSVEQTSGR 218 Query: 147 SICVQAGTTTELTLADYFKAHNM 169 ++C G+T + D+ N+ Sbjct: 219 TLCAVDGSTALDKIPDFAPNSNL 241 >gi|241113591|ref|YP_002973426.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240861799|gb|ACS59465.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 279 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 64/274 (23%), Positives = 116/274 (42%), Gaps = 17/274 (6%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V L + L T + S L ++ RG L G + + A+ +GFDVD Sbjct: 9 VMSLAVAALLSTPALADGSKLDEVLARGHLVLGTGSTNAPWHFKSADDKLQGFDVDMGHI 68 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 ++ A+F DP KI+Y+ ++ R + + ++DI + T+ E + +AF Y +G Sbjct: 69 IAKALFGDPEKIEYVNQSSDARIPNITTDKVDITCQFM--TVTGERAQQVAFTIPYYREG 126 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA-- 184 G ++ + + L AG++ +++ A M + + V++ D+ Sbjct: 127 VGLMLKADGKYADYAALKA------AGSSVTISVLQNVYAEAMVHAALPEATVDQYDSVD 180 Query: 185 ----AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A + R DA D S+L A +T + P + + A A+ +GD +W N Sbjct: 181 LIYQALESGRADAVATDQSSL-AWYMTQN-PGRYKDAGYGWNPQTYACAVKRGDQDWLNF 238 Query: 241 VSWTHYAMVTAEELGITQKNINQ-VSKDTTNPDV 273 V+ + +T E K+ KD T P + Sbjct: 239 VNTALHEAMTGVEFDFYAKSFKTWFGKDLTPPQI 272 >gi|300690825|ref|YP_003751820.1| amino-acid-binding periplasmic abc transporter protein [Ralstonia solanacearum PSI07] gi|299077885|emb|CBJ50524.1| putative amino-acid-binding periplasmic abc transporter protein [Ralstonia solanacearum PSI07] Length = 285 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 50/187 (26%), Positives = 84/187 (44%), Gaps = 11/187 (5%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK--ANGDWKGFDVDFCRALSSAIFDD 74 + A L DIKK+G L CG+ F+ +K + + G+DVD C A++ + Sbjct: 25 LAAVPAKADQLADIKKKGELVCGVLGTDEPFSFLKDPMSREIVGYDVDMCNAVAKRLGVK 84 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 P Q L R LQ ++D+L+ + RE + F T+ GQ ++ K Sbjct: 85 PVLKQ---LAVAARIPELQQGRVDLLAASLTHNKEREAQID--FSVSTFITGQKAMVRKD 139 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 GI+S++QL G + G+T E +A K ++ + F+ + A + + AY Sbjct: 140 SGITSLAQLDGKKVLTVKGSTMEANIAKTVKNADI----VSFDNSPQALLALQQGKGAAY 195 Query: 195 TGDISAL 201 D + L Sbjct: 196 VNDETTL 202 >gi|257125151|ref|YP_003163265.1| extracellular solute-binding protein family 3 [Leptotrichia buccalis C-1013-b] gi|257049090|gb|ACV38274.1| extracellular solute-binding protein family 3 [Leptotrichia buccalis C-1013-b] Length = 282 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 63/252 (25%), Positives = 108/252 (42%), Gaps = 21/252 (8%) Query: 1 MYKDF--FVSILCLIILFFTSFSTNASILGD--------IKKRGFLKCGINTGLVGFAEV 50 M K+F V I+ +++L + S G IKK G ++ G+ F V Sbjct: 1 MKKNFERLVKIIAILVLGVFAISCGKGGKGSAEPGSIEAIKKAGKIRIGVFGDKPPFGFV 60 Query: 51 KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 NG +G+D+ + L+ + D +KI+++ L A R L S ++DI+ N T R Sbjct: 61 DENGKNQGYDIYLAKRLAKDLLGDENKIEFVTLEAANRVEYLLSNKVDIILANFTVTDER 120 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 + + A +P G + + I V +L G + V GTT E+ YF + Sbjct: 121 KQKVDFA-KPYMKV-SLGIVSPEGAPIKDVKELKGKKLIVNKGTTAEI----YFTKNYPD 174 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 + +++ E A R A D + ++A N P V + + + +APA+ Sbjct: 175 IELLKYDQNTETFNALLDKRGAALAHDNTLVFAWATEN--PGFVVDIKQLGEQDYIAPAV 232 Query: 231 IQGDTE---WYN 239 +G+ E W N Sbjct: 233 RKGNKELLDWLN 244 >gi|115351568|ref|YP_773407.1| extracellular solute-binding protein [Burkholderia ambifaria AMMD] gi|115281556|gb|ABI87073.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia ambifaria AMMD] Length = 271 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 67/228 (29%), Positives = 102/228 (44%), Gaps = 21/228 (9%) Query: 23 NASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 +A L DI+K G L+ + G+ + K+N G DVD+ +AL+ + K+Q Sbjct: 23 HADRLDDIRKAGVLRVATFDSNPPFGYVDAKSN-HIVGLDVDYAKALADKL---GVKLQL 78 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 P N R L S ++D++ N +T+ E + + F I YF + KK + S Sbjct: 79 QPTNPANRIPFLTSGKVDLVLAN--FTITDERAKQVDFS-IPYFSSGQQFLAKKGVLKSA 135 Query: 141 SQLSGASICVQAGTTTELTLAD-YFKAHNMKYH--PIVFERVEEIDAAYRAHRCDAYTGD 197 QL+G + GTT E+TL + Y KA + Y P F AA RA A T D Sbjct: 136 DQLNGLRVGADKGTTNEITLREKYPKATIVAYDDTPFAF-------AALRAGNVQAITQD 188 Query: 198 ISALYALKLTNDRPSEHVILPDI-ISKSPLAPAIIQGDTEWYNIVSWT 244 L L L N ++ +P IS + + +G+T V+ T Sbjct: 189 GPKLIGL-LANVPDKQNYEIPAFTISNDYMGVGVPKGETRLLGFVNDT 235 >gi|258545105|ref|ZP_05705339.1| ABC superfamily ATP binding cassette transporter, binding protein [Cardiobacterium hominis ATCC 15826] gi|258519624|gb|EEV88483.1| ABC superfamily ATP binding cassette transporter, binding protein [Cardiobacterium hominis ATCC 15826] Length = 268 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 53/206 (25%), Positives = 93/206 (45%), Gaps = 8/206 (3%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 ++K +G ++ G+ + F V ANG +GFDV+ R L+ + D +K +++ + A R Sbjct: 25 ELKAKGEVRIGVFSDKPPFGYVDANGVSQGFDVEIGRYLTKQLLGDEAKAKFVLVEAANR 84 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 L+S ++DI+ N T R + A +P G + K I S+ +L ++ Sbjct: 85 VEYLRSNKVDIILANFTVTPERAKVVDYA-KPYMKV-ALGVVSPDKAPIKSIDELKDKTL 142 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 + GTT + YF + + +++ E A R DA D + L A Sbjct: 143 LLNKGTTADR----YFSKEHRDIKSLKYDQNTETFNALLDGRGDALAHDNTLLLA--WAK 196 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGD 234 + P V + I +APA+ +GD Sbjct: 197 EHPGYSVGITRIGEDDFIAPAVAKGD 222 >gi|228477047|ref|ZP_04061685.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus salivarius SK126] gi|228251066|gb|EEK10237.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus salivarius SK126] Length = 284 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 57/237 (24%), Positives = 105/237 (44%), Gaps = 21/237 (8%) Query: 11 CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70 C + A + +IKK G L+ + F V G ++G+D++ L+ Sbjct: 23 CSSNSSSGKSTAKARTIEEIKKSGELRIAVFADKKPFGYVDNKGAYQGYDIELGNRLAKD 82 Query: 71 IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQG 128 + P +Y+ ++A R L S ++DI N T R ++ L + ++ G Sbjct: 83 LGVKP---KYVSVDAANRAEFLISNKVDITLANFTVTDERKKQVDFALPYMKVSI----G 135 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 + K K I V +L G ++ V GTT E YF+ + Y I ++ ++ AY+A Sbjct: 136 VVSPKDKVIKDVKELEGKTLIVTKGTTAET----YFEKN---YPNIKLQKYDQYSDAYQA 188 Query: 189 ---HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 R DA++ D + + A L N V + + + +APA+ +G+ E + ++ Sbjct: 189 LLDGRGDAFSTDNTEVLAWALEN--KGYEVGITSLGNPDTIAPAVQKGNKELLDFIN 243 >gi|289168272|ref|YP_003446541.1| ABC transporter substrate binding lipoprotein-amino acid transport [Streptococcus mitis B6] gi|288907839|emb|CBJ22679.1| ABC transporter substrate binding lipoprotein-amino acid transport [Streptococcus mitis B6] Length = 288 Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 58/228 (25%), Positives = 106/228 (46%), Gaps = 23/228 (10%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + A + DIKK G L+ + F V +G ++G+D++ L+ D K++Y Sbjct: 37 TAKARTIDDIKKSGELRIAVFGDKKPFGYVDNDGSYQGYDIELGNQLAQ---DLGVKVKY 93 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKKGIS 138 + ++A R L S ++DI N T R ++ L + ++ G + K I+ Sbjct: 94 VSVDAANRAEYLISNKVDITLANFTVTDERKKQVDFALPYMKVSL----GVVSPKTGLIT 149 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP-IVFERVEEIDAAYRA---HRCDAY 194 V QL G ++ V GTT E YF+ K HP I ++ ++ +Y+A R DA+ Sbjct: 150 DVKQLEGKTLIVTKGTTAET----YFE----KNHPEIKLQKYDQYSDSYQALLDGRGDAF 201 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + D + + A L N V + + + +A A+ +G+ E + ++ Sbjct: 202 STDNTEVLAWALEN--KGFEVGITSLGNPDTIAAAVQKGNQELLDFIN 247 >gi|319791541|ref|YP_004153181.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] gi|315594004|gb|ADU35070.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] Length = 299 Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 55/240 (22%), Positives = 102/240 (42%), Gaps = 6/240 (2%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK- 77 +F+ L IK G + G+ G + NG + GF D C + + K Sbjct: 18 AFAQANDTLAKIKASGVITEGVRES-SGLSYTLGNGQYTGFHYDVCANIIKDLEKAAGKK 76 Query: 78 --IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 +++ P+ ++ R +Q+ +DI +T R+ + AF TY + ++ Sbjct: 77 LEVKFQPVTSQNRIPLVQNGTVDIECGSTTNNATRQKDV--AFGVTTYVEETKIVVKANS 134 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 GI+S++ L ++ GTT T+ +A N+ + + + + R DA+ Sbjct: 135 GINSLADLKDKTVATTTGTTPLQTVRKQKRAENLSFKEVYGKDHSDSFLLLETGRADAFV 194 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D S L AL + P ++ ILPD+++ P+ I + D + V + A + EL Sbjct: 195 MDGSILAALAAKSKSPKDYKILPDVLAVEPIGIMIRKDDPAFKKAVDDSIKAQAKSGELA 254 >gi|225862618|ref|YP_002747996.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus 03BB102] gi|225788614|gb|ACO28831.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus 03BB102] Length = 276 Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 51/207 (24%), Positives = 93/207 (44%), Gaps = 13/207 (6%) Query: 30 IKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 IKKRG L G+ +T L G + G +GFDVD +AL+ I D K++ + +K Sbjct: 45 IKKRGKLVVGVKNDTNLFGLKN-PSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKT 103 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGA 146 R L++ ID + T+ E + F + + GQ ++ K I ++ + G Sbjct: 104 RIPLLKNGDIDAIIAT--MTITEERKKEVDFSDVYFKAGQSLLVKKGSDIKNIDDVKKGV 161 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 + G+T+ + + + + + FE E A +A + D T D + LY + Sbjct: 162 KVLAVKGSTS----TNNIRQKSPEATVLEFENYSEAFTALKAGKGDVLTTDNAILYGM-- 215 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQG 233 + S + ++ I ++ P A+ +G Sbjct: 216 -AKQDSNYEVVGKIFTEEPYGIAVQKG 241 >gi|298492610|ref|YP_003722787.1| family 1 extracellular solute-binding protein ['Nostoc azollae' 0708] gi|298234528|gb|ADI65664.1| extracellular solute-binding protein family 3 ['Nostoc azollae' 0708] Length = 292 Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 58/230 (25%), Positives = 100/230 (43%), Gaps = 15/230 (6%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGL--VGFAEVKANGDWKGFDVDF 63 + ILCL L T + + L +I+KRG+L + L +GF + K G+ +G ++D Sbjct: 32 LILILCLFSLG-TDLVASGATLPEIQKRGYLTVAVKDNLRPLGFRDDK--GNLQGLEIDL 88 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 + L++ + P +++ P+ +R + +ID+ N T R S ++F Y Sbjct: 89 AKRLANDLLGKPDAVKFQPVANSDRLPVIVENKIDLAIANVTATESR--SRIVSFSVPYY 146 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 +DG I+ K I+ + L I V ++T Y K K I + Sbjct: 147 YDGAA-IVTKDTSINQLEDLYRRKIAVLNNSSTIF----YVKYFIPKSELIGVSSYAQAQ 201 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 ++ DA+ D S L + P H ILP +S PL+ + +G Sbjct: 202 EKIESNAVDAFAADNSLLSG--WVQEYPKYH-ILPSQLSTEPLSVVMAKG 248 >gi|323697579|ref|ZP_08109491.1| extracellular solute-binding protein family 3 [Desulfovibrio sp. ND132] gi|323457511|gb|EGB13376.1| extracellular solute-binding protein family 3 [Desulfovibrio desulfuricans ND132] Length = 274 Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 19/216 (8%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER--FLALQ 93 LK G++ + F + +W GFDVD ++ + K++ + +N R F+ Sbjct: 35 LKVGLSNQGIPFGFIDDKNEWVGFDVDMATEIAKRL---GCKLEKVVVNNNTRISFVQTN 91 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITY-FDGQGFIMHKKKGISSVSQLSGASICVQA 152 ++D++ N +R+ + + ITY FDGQ F + KK + V L+ + Sbjct: 92 PPKVDMVLSNMTHKRVRDEKIDFS---ITYFFDGQKF-LAKKGTVKDVKDLANMKVGSMQ 147 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEID--AAYRAHRCDAYTGDISAL--YALKLTN 208 GTT+ + Y K +P V E+ A R+ R A T D + L YA K+ Sbjct: 148 GTTSIVNATAYLKELG-NPNPSVTGYDGEVAMFEALRSGRVQAITTDSTILLGYAAKV-- 204 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 P + ++ D IS P + Q D+ W + +++T Sbjct: 205 --PGQFELVGDFISDEPYGIGLPQDDSAWRDTINFT 238 >gi|110678538|ref|YP_681545.1| amino-acid ABC transporter, periplasmic binding protein [Roseobacter denitrificans OCh 114] gi|109454654|gb|ABG30859.1| amino-acid ABC transporter, periplasmic binding protein [Roseobacter denitrificans OCh 114] Length = 278 Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 59/223 (26%), Positives = 102/223 (45%), Gaps = 8/223 (3%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS----KI 78 +A L IK+ G L G T + + N + KG+ C AL+S I + +I Sbjct: 19 HAQTLERIKQNGQLVIGFRTDAAPLSYLGEN-EPKGYTPTVCYALASKIAAEVEVPDLEI 77 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + + A++RF + + ID+L TL R + + PI Y DG ++ KK G Sbjct: 78 IFRSVTAEDRFEQVANGNIDLLCGAATITLERRELVDFSV-PI-YVDGTVVVL-KKGGPD 134 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 S+ L+G + V+A TTT L + A ++ ++F+ AA AY D Sbjct: 135 SLEGLAGMKVGVRAATTTLEALQNSLAAADIAAEVVIFDDHPTGMAALEQDEIAAYFADQ 194 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 S L + + ++ +E + +++ A+ +GDTE+ +V Sbjct: 195 SILMNMVMQSEVANELKVFDQLLTVEKQGLAMARGDTEFRLVV 237 >gi|325956804|ref|YP_004292216.1| glutamine ABC transporter substrate-binding protein [Lactobacillus acidophilus 30SC] gi|325333369|gb|ADZ07277.1| glutamine ABC transporter substrate-binding protein [Lactobacillus acidophilus 30SC] Length = 289 Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 65/247 (26%), Positives = 107/247 (43%), Gaps = 28/247 (11%) Query: 4 DFFVSILCLIILF------FTSFSTNASILG----------DIKKRGFLKCGINTGLVGF 47 ++ +S+L +I++ FT N+ L +IK+RG+++ + L + Sbjct: 8 NWIISVLAIILVVVSAYFGFTQKGLNSGTLASRWNSQNGVSEIKRRGYIRVAVFGDLPPY 67 Query: 48 AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 V ++G G+DV R ++ D KI+++ +NA R L S + DI+ N T Sbjct: 68 GWVNSDGKRVGYDVYLARRMAK---DLGVKIRFVQVNANNRVDTLNSNKADIVLANFTVT 124 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 R+ + A +P G I K I S SQL + V GTT E +YF Sbjct: 125 PERKEVVDYA-KPYMKVS-VGVISPKSAPIKSASQLKNKKLIVTKGTTAE----NYFTKQ 178 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 + + F+ + A + R A D S LYA N P V + I K ++ Sbjct: 179 G-NVNLLKFDSKTQQFNALKNGRGAALADDNSYLYAWVKQN--PKYTVGIKSIGPKQYIS 235 Query: 228 PAIIQGD 234 PA+ +G+ Sbjct: 236 PAVKKGN 242 >gi|312863687|ref|ZP_07723925.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus vestibularis F0396] gi|322516243|ref|ZP_08069175.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus vestibularis ATCC 49124] gi|311101223|gb|EFQ59428.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus vestibularis F0396] gi|322125307|gb|EFX96672.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus vestibularis ATCC 49124] Length = 284 Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 57/237 (24%), Positives = 104/237 (43%), Gaps = 21/237 (8%) Query: 11 CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70 C + A + +IKK G L+ + F V G ++G+D++ L+ Sbjct: 23 CSSNSSSGKSTAKARTIEEIKKSGELRIAVFADKKPFGYVDNKGAYQGYDIELGNRLAKD 82 Query: 71 IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQG 128 + P +Y+ ++A R L S ++DI N T R ++ L + ++ G Sbjct: 83 LGVKP---KYVSVDAANRAEFLISNKVDITLANFTVTDERKKQVDFALPYMKVSI----G 135 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 + K K I V +L G ++ V GTT E YF+ + Y I ++ ++ AY+A Sbjct: 136 VVSPKDKVIKDVKELEGKTLIVTKGTTAET----YFEKN---YPNIKLQKYDQYSDAYQA 188 Query: 189 ---HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 R DA++ D + + A L N V + + +APA+ +G+ E + ++ Sbjct: 189 LLDGRGDAFSTDNTEVLAWALEN--KGYEVGITSLGDPDTIAPAVQKGNKELLDFIN 243 >gi|319761716|ref|YP_004125653.1| extracellular solute-binding protein family 3 [Alicycliphilus denitrificans BC] gi|317116277|gb|ADU98765.1| extracellular solute-binding protein family 3 [Alicycliphilus denitrificans BC] Length = 277 Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 49/211 (23%), Positives = 96/211 (45%), Gaps = 18/211 (8%) Query: 19 SFSTNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 S S A L DIK +G L CG+ + F + + +G+DVDFC A++ ++ Sbjct: 24 STSAMADQLADIKAKGSLVCGVLGTSKPFSFPNPQTR-EIQGYDVDFCSAVAKSLG---V 79 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 K++ P++ R L K+ID+++ N WT R + + Y+ + K+ Sbjct: 80 KLEIKPISVAARIPELTQKRIDVIAANLGWTAERAQQIAYS---DAYYVALQKVAVKRGA 136 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 + + L+G + G+T+E+ + + P+ F+ A + + D + Sbjct: 137 FARSTDLAGKRVSATKGSTSEIAIRAFLPTAT----PVTFQDPPPAFLALQQGKVDGFV- 191 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLA 227 ++ + ++L ++H I DI+ + PLA Sbjct: 192 -VTEMVLVQLKAQSEADHPI--DIL-EPPLA 218 >gi|55823483|ref|YP_141924.1| amino acid (glutamine) ABC transporter substrate binding protein [Streptococcus thermophilus CNRZ1066] gi|116628268|ref|YP_820887.1| amino acid ABC transporter periplasmic protein [Streptococcus thermophilus LMD-9] gi|55739468|gb|AAV63109.1| amino acid (glutamine) ABC transporter substrate binding protein [Streptococcus thermophilus CNRZ1066] gi|116101545|gb|ABJ66691.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus thermophilus LMD-9] gi|312278892|gb|ADQ63549.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus thermophilus ND03] Length = 284 Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 57/237 (24%), Positives = 104/237 (43%), Gaps = 21/237 (8%) Query: 11 CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70 C + A + +IKK G L+ + F V G ++G+D++ L+ Sbjct: 23 CSSNSSSGKSTAKARTIEEIKKSGELRIAVFADKKPFGYVDNKGAYQGYDIELGNRLAKD 82 Query: 71 IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQG 128 + P +Y+ ++A R L S ++DI N T R ++ L + ++ G Sbjct: 83 LGVKP---KYVSVDAANRAEFLISNKVDITLANFTVTDERKKQVDFALPYMKVSI----G 135 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 + K K I V +L G ++ V GTT E YF+ + Y I ++ ++ AY+A Sbjct: 136 VVSPKDKVIKDVKELEGKTLIVTKGTTAET----YFEKN---YPNIKLQKYDQYSDAYQA 188 Query: 189 ---HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 R DA++ D + + A L N V + + +APA+ +G+ E + ++ Sbjct: 189 LLDGRGDAFSTDNTEVLAWALEN--KGYEVGITSLGDPDTIAPAVQKGNKELLDFIN 243 >gi|300703462|ref|YP_003745064.1| amino-acid-binding periplasmic ABC transporter protein [Ralstonia solanacearum CFBP2957] gi|299071125|emb|CBJ42437.1| putative amino-acid-binding periplasmic abc transporter protein [Ralstonia solanacearum CFBP2957] Length = 284 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 56/233 (24%), Positives = 102/233 (43%), Gaps = 12/233 (5%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVK--ANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 A L DIKK+G L CG+ F+ +K + + G+DVD C A++ ++ P Q Sbjct: 31 ADQLSDIKKKGELVCGVLGTDEPFSFLKDPMSREIVGYDVDMCNAVAKSLGVKPVLKQ-- 88 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 L R LQ ++D+L+ + RE + F T+ GQ ++ K GI++++ Sbjct: 89 -LAVAARIPELQQGRVDLLAASLTHNKEREAQID--FSVSTFITGQKAMVRKDSGITTLA 145 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 QL G + G+T E + K ++ + F+ + A + + AY D + L Sbjct: 146 QLDGKKVLTVKGSTMEANIGKAIKNADI----VSFDNSPQALLALQQGKGAAYVNDETTL 201 Query: 202 YA-LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 + ++ I+P +S +A I + + + V+ M + E Sbjct: 202 IGNMAKLGPASKDYAIVPQNLSTEHIALGIRKNEPAFREQVNKVLLGMEASGE 254 >gi|325518275|gb|EGC98022.1| extracellular solute-binding protein [Burkholderia sp. TJI49] Length = 271 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 62/238 (26%), Positives = 105/238 (44%), Gaps = 15/238 (6%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRAL 67 L + L + +A L DI+K G L+ + G+ + K+N G DVD+ +A+ Sbjct: 10 LVGVALVTAGTAAHADRLDDIRKAGVLRVATFDSNPPFGYVDAKSN-HIVGLDVDYAKAI 68 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + K+Q P N R L S ++D++ N +T+ E + + F I YF Sbjct: 69 ADKL---GVKLQLQPTNPANRIPFLTSGKVDLVLAN--FTITDERAKQVDFS-IPYFSSG 122 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 + KK + S QL+G + GTT E+TL + + + + + ++ AA R Sbjct: 123 QQFLAKKGVLKSADQLNGLRVGADKGTTNEITLREKYPSATI----VAYDDTPFAFAALR 178 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDI-ISKSPLAPAIIQGDTEWYNIVSWT 244 A A T D L L L N ++ +P IS + + +G+T V+ T Sbjct: 179 AGNVQAITQDGPKLIGL-LANVPDKQNYEIPAFTISNDYMGVGVPKGETRLLGFVNDT 235 >gi|254421935|ref|ZP_05035653.1| Bacterial extracellular solute-binding protein, family 3 [Synechococcus sp. PCC 7335] gi|196189424|gb|EDX84388.1| Bacterial extracellular solute-binding protein, family 3 [Synechococcus sp. PCC 7335] Length = 288 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 53/227 (23%), Positives = 93/227 (40%), Gaps = 14/227 (6%) Query: 13 IILFFTSFSTNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSA 70 ++ F S + A+ L +I++RG+L + N +GF + + GF++D R L+ Sbjct: 18 LLPLFVSLNAFAAELSEIRERGYLVVAVKDNRPPMGF--LNSADQLSGFEIDIARKLAED 75 Query: 71 IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130 + D ++ +P +R A+ ++D+ T R + ++ Y DG FI Sbjct: 76 LLGDADAVELVPTRNVDRLDAVIENRVDVAIAALTITEPRRRIVSFSYP--YYLDGTAFI 133 Query: 131 MH----KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 I ++ L +I V ++T L+ A + E Sbjct: 134 TRLPTDSAPDILTLHDLQLGTIAVLERSSTVAQLSYLLPAAQQ----VGVGSYLEAQTLV 189 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + DA+ GD S L + H +LPDIIS PLA + +G Sbjct: 190 ESGAVDAFAGDASVLAGWTMEGGALMNHSMLPDIISAEPLAVVLPKG 236 >gi|227489293|ref|ZP_03919609.1| family 3 extracellular solute-binding protein [Corynebacterium glucuronolyticum ATCC 51867] gi|227090753|gb|EEI26065.1| family 3 extracellular solute-binding protein [Corynebacterium glucuronolyticum ATCC 51867] Length = 336 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 40/147 (27%), Positives = 80/147 (54%), Gaps = 9/147 (6%) Query: 21 STNAS-ILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 ST AS ++ DI KRG++ G+ + L+ + ++ A G+ GF++D ++ IF DPSK Sbjct: 74 STPASELIPDIYKRGYIIVGVEQSQNLMSYRDL-ATGELIGFEIDLAHEIARDIFGDPSK 132 Query: 78 IQYLPLNAKERFLALQ---SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 + + ++A R AL ++++D++ R T+ + + + F + GF+ K Sbjct: 133 VAFRYVDAANREQALSAPPTERVDVVIRA--MTMTKGRADNVDFSAPYFSTSAGFLTDKD 190 Query: 135 KGISSVSQLSGASICVQAGTTTELTLA 161 +++V L+ A++CV G+ + +A Sbjct: 191 SPVTTVDDLNKATVCVAQGSINQYRVA 217 >gi|294083879|ref|YP_003550636.1| putative ABC transporter periplasmic amino acid-binding protein [Candidatus Puniceispirillum marinum IMCC1322] gi|292663451|gb|ADE38552.1| putative ABC transporter periplasmic amino acid-binding protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 275 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 46/184 (25%), Positives = 80/184 (43%), Gaps = 5/184 (2%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 L L + T A L D+ G ++CG+ AN + GFDV++C+ L++ Sbjct: 16 LALSLALTTGTVAQADKLDDVIDNGKVRCGVVLDFPPIGYRDANNEPAGFDVEYCKDLAT 75 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 A+ D + +PL ER ++ S + D++ T TL R ++G P + Q Sbjct: 76 AMDVD---YEIIPLTWAERLPSIVSNRADVVFGGTSDTLERAKTVGFTI-PYAIYYAQA- 130 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 ++ K+ GI+S + + G + GT E+ K + F+ E+ A Sbjct: 131 VVTKESGITSFADMKGKRVGAAVGTVPEIEFLKIAKEWGTENLYQGFQSENEVFLAVAQG 190 Query: 190 RCDA 193 + DA Sbjct: 191 KIDA 194 >gi|229587795|ref|YP_002869914.1| putative amino acid ABC transporter substrate-binding protein [Pseudomonas fluorescens SBW25] gi|229359661|emb|CAY46509.1| putative amino acid ABC transport system, substrate-binding protein [Pseudomonas fluorescens SBW25] Length = 284 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 58/219 (26%), Positives = 94/219 (42%), Gaps = 13/219 (5%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S + IK R L G+ T F V G + GFD D R + + D +K++++ + Sbjct: 33 SYIDKIKARDKLIVGVFTDKPPFGFVNEAGRYVGFDTDIGRRFAKDLLGDENKVEFVAVE 92 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 R LQS ++D++ N T R+ ++ P Q + SSV L Sbjct: 93 PASRIPFLQSDKVDLILANMTVTPERKEAVDFT-NPNLKVAVQALVPQD----SSVKSLD 147 Query: 145 GASICVQAGTTTELTLAD-YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 + + T T AD + H+ + + FE+ E A A R DAY D L++ Sbjct: 148 --DLATRTTIVTTGTTADIWLTKHHPDWKLLKFEKNSESLQALSAGRGDAYAQDNLVLFS 205 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE---WYN 239 N P V+ + ++P+APA+ +G+ E W N Sbjct: 206 WAKQN--PGYRVLEEKLGDEAPIAPAVKKGNVELRDWVN 242 >gi|320095228|ref|ZP_08026929.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Actinomyces sp. oral taxon 178 str. F0338] gi|319977842|gb|EFW09484.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Actinomyces sp. oral taxon 178 str. F0338] Length = 302 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 59/217 (27%), Positives = 106/217 (48%), Gaps = 22/217 (10%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 IK+ G + GI + F + A+G G+DV + +++ D +Y+P++A R Sbjct: 54 IKEAGEITIGIFSDKAPFGYIDADGKPAGYDVVYGDRIAA---DLGVTAKYVPVDAAART 110 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 LQS ++DI N +T+ E + + F + G + I+ VSQL+G ++ Sbjct: 111 EVLQSNKVDITLAN--FTVTPERAEKVDFANPYFKVSLGVVSPASAEITDVSQLAGKTLI 168 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIV-FERVEEIDAAYRA---HRCDAYTGDISALYALK 205 V GTT E YF+A+ HP V ++ ++ AY+A R DA++ D + + A Sbjct: 169 VTKGTTAEA----YFEAN----HPEVELQKYDQYSDAYQALEDGRGDAFSTDNTEVIAWA 220 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDT---EWYN 239 + + P V + + S +A A+ +G++ +W N Sbjct: 221 IAH--PGFGVGIKSLGETSYIAAAVKKGNSALLDWLN 255 >gi|229095292|ref|ZP_04226284.1| hypothetical protein bcere0020_5490 [Bacillus cereus Rock3-29] gi|228688151|gb|EEL42037.1| hypothetical protein bcere0020_5490 [Bacillus cereus Rock3-29] Length = 275 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 17/209 (8%) Query: 30 IKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 IKKRG L G+ +T L G + G +GFDVD +AL+ I D K++ + +K Sbjct: 45 IKKRGKLVVGVKNDTNLFGLKN-PSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKT 103 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK---KGISSVSQLS 144 R L++ ID + T+ E + F + + GQ ++ K KGI + Q Sbjct: 104 RIRLLKNGDIDAIIAT--MTITEERKKEVDFSDVYFKAGQSLLVKKGSNIKGIDDIKQ-- 159 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G + G+T+ + + + + + FE E +A + D T D + LY + Sbjct: 160 GVKVLAVKGSTS----TNNIRQKSPEATVLEFENYSEAFTGLKAGKGDVLTTDNAILYGM 215 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + S + ++ I + P A+ +G Sbjct: 216 A---KQDSNYEVVGKIFTDEPYGIAVQKG 241 >gi|229817173|ref|ZP_04447455.1| hypothetical protein BIFANG_02432 [Bifidobacterium angulatum DSM 20098] gi|229784962|gb|EEP21076.1| hypothetical protein BIFANG_02432 [Bifidobacterium angulatum DSM 20098] Length = 298 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 62/225 (27%), Positives = 101/225 (44%), Gaps = 19/225 (8%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 S S A L +IKK G LK + + F V +G G+D+ F L+ D K+ Sbjct: 46 SSSAKARTLDEIKKSGELKVAVFSDKAPFGYVDKDGKNAGYDIVFAERLAK---DLGVKV 102 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 +Y ++ R L S ++DI N T R+ + A +P G + + I+ Sbjct: 103 KYTSVDPAARVDVLTSNKVDITLANFTVTDERKEKVDFA-KPYMKV-ALGVVSPENAEIT 160 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV-FERVEEIDAAYRA---HRCDAY 194 VSQL G ++ + GTT E YF+ K P V ++ ++ AY A R DA+ Sbjct: 161 DVSQLKGKTLIIAKGTTAET----YFE----KNQPDVKLQKYDQYADAYNALLDGRGDAF 212 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + D + + A +N V + + + +APA+ +G+ E N Sbjct: 213 STDNTEVLAWAKSN--KGFKVGITKLGDEDTIAPAVQKGNKELLN 255 >gi|241630654|ref|XP_002408387.1| cystine-binding periplasmic protein, putative [Ixodes scapularis] gi|215501179|gb|EEC10673.1| cystine-binding periplasmic protein, putative [Ixodes scapularis] Length = 249 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 73/235 (31%), Positives = 104/235 (44%), Gaps = 23/235 (9%) Query: 23 NASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 A L DIKK G LK + GF + K+ G DVDF +AL+ + K++ Sbjct: 13 QADRLDDIKKTGVLKVASFDSNPPFGFVDQKSR-QITGLDVDFAQALADKLG---VKLEV 68 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF-DGQGFIMHKKKGISS 139 LP N R L S ++D++ N +T+ E + + F I YF GQ F + KK +SS Sbjct: 69 LPTNPANRVPLLTSNKVDLVLAN--FTITEERAKQVDFS-IPYFASGQQF-LAKKGVLSS 124 Query: 140 VSQLSGASICVQAGTTTELTLAD-YFKAHNMKYH--PIVFERVEEIDAAYRAHRCDAYTG 196 QL+ I V GT E+ L + Y +A + Y P F A R A T Sbjct: 125 PEQLNSLRIGVDKGTVNEIVLREKYPQAKLVAYDDTPFAF-------TALRNGNVQAITQ 177 Query: 197 DISALYALKLTNDRPSEHVILPDI-ISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 D L L L N E+ +P IS+ + I +G+T + V T + T Sbjct: 178 DGPKLIGL-LANVPDKENYEIPAFSISEDLIGIGIPKGETALKSFVDETLLELET 231 >gi|329295744|ref|ZP_08253080.1| family 3 extracellular solute-binding protein [Plautia stali symbiont] Length = 83 Score = 59.7 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 32/79 (40%), Positives = 49/79 (62%), Gaps = 1/79 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K +++ LF + +A + L IKK+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKMMLSTLIAAASLFAVTQQAHAGTTLDAIKKKGFIQCGISDGLPGFSYADASGKFTGI 60 Query: 60 DVDFCRALSSAIFDDPSKI 78 DVD CRA ++A+F D SK+ Sbjct: 61 DVDVCRAAAAAVFGDASKV 79 >gi|78066232|ref|YP_369001.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia sp. 383] gi|77966977|gb|ABB08357.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia sp. 383] Length = 271 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 68/228 (29%), Positives = 101/228 (44%), Gaps = 21/228 (9%) Query: 23 NASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 +A L DIKK G L+ + G+ + K+N G DVD+ +AL+ + K+Q Sbjct: 23 HADRLDDIKKAGVLRVATFDSNPPFGYVDGKSN-HIVGLDVDYAKALADKL---GVKLQL 78 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 P N R L S ++D++ N +T+ E + + F I YF + KK + S Sbjct: 79 QPTNPANRIPFLTSGKVDLVLAN--FTITDERAKQVDFS-IPYFSSGQQFLAKKGVLKSA 135 Query: 141 SQLSGASICVQAGTTTELTLADYF-KAHNMKYH--PIVFERVEEIDAAYRAHRCDAYTGD 197 QLS + GTT E+TL + F KA + Y P F AA RA A T D Sbjct: 136 DQLSALRVGADKGTTNEITLREKFPKATIVAYDDTPFAF-------AALRAGNVQAITQD 188 Query: 198 ISALYALKLTNDRPSEHVILPDI-ISKSPLAPAIIQGDTEWYNIVSWT 244 L L L N ++ +P IS + + +G+T V+ T Sbjct: 189 GPKLIGL-LANVPDKQNYEIPAFTISNDYMGVGVPKGETRLLGFVNDT 235 >gi|209547535|ref|YP_002279453.1| family 3 extracellular solute-binding protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538779|gb|ACI58713.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 279 Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 64/274 (23%), Positives = 114/274 (41%), Gaps = 17/274 (6%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V L L T + S L ++ RG L G + + A+ +GFDVD Sbjct: 9 VMSLAAAALLSTPALADGSKLDEVLARGHLVLGTGSTNAPWHFKSADDKLQGFDVDMGHI 68 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 ++ A+F DP KI+Y+ ++ R + + ++DI + T+ E + +AF Y +G Sbjct: 69 IAKALFGDPEKIEYVNQSSDARIPNITTDKVDITCQFM--TVTGERAQQVAFTIPYYREG 126 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA-- 184 G ++ + L AG++ +++ A M + + V++ D+ Sbjct: 127 VGLMLKADGKYGDYAALKA------AGSSATISVLQNVYAETMVHAALPDATVDQYDSVD 180 Query: 185 ----AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A + R DA D S+L A +T + P + + A A+ +GD +W N Sbjct: 181 LIYQALESGRADAVATDQSSL-AWYMTQN-PGRYKDAGYGWNPQTYACAVKRGDQDWLNF 238 Query: 241 VSWTHYAMVTAEELGITQKNINQ-VSKDTTNPDV 273 V+ + +T E K+ KD T P + Sbjct: 239 VNTALHEAMTGVEFDFYAKSFKTWFGKDLTPPQI 272 >gi|227540882|ref|ZP_03970931.1| 3 family extracellular solute-binding protein [Corynebacterium glucuronolyticum ATCC 51866] gi|227183142|gb|EEI64114.1| 3 family extracellular solute-binding protein [Corynebacterium glucuronolyticum ATCC 51866] Length = 336 Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 40/147 (27%), Positives = 80/147 (54%), Gaps = 9/147 (6%) Query: 21 STNAS-ILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 ST AS ++ DI KRG++ G+ + L+ + ++ A G+ GF++D ++ IF DPSK Sbjct: 74 STPASELIPDIYKRGYIIVGVEQSQNLMSYRDL-ATGELIGFEIDLAHEIARDIFGDPSK 132 Query: 78 IQYLPLNAKERFLALQ---SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 + + ++A R AL ++++D++ R T+ + + + F + GF+ K Sbjct: 133 VAFRYVDAANREQALSAPPTERVDVVIRA--MTMTKGRADNVDFSAPYFSTSAGFLTDKD 190 Query: 135 KGISSVSQLSGASICVQAGTTTELTLA 161 +++V L+ A++CV G+ + +A Sbjct: 191 SPVTTVDDLNKATVCVAQGSINQYRVA 217 >gi|157150751|ref|YP_001450271.1| amino acid transport protein [Streptococcus gordonii str. Challis substr. CH1] gi|262282452|ref|ZP_06060220.1| amino acid transporter [Streptococcus sp. 2_1_36FAA] gi|157075545|gb|ABV10228.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus gordonii str. Challis substr. CH1] gi|262261743|gb|EEY80441.1| amino acid transporter [Streptococcus sp. 2_1_36FAA] Length = 284 Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 64/251 (25%), Positives = 114/251 (45%), Gaps = 32/251 (12%) Query: 7 VSILCLIILFFTS---------FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 V L L ++F T+ S+ A + +IKK G L+ + F V +G ++ Sbjct: 10 VMTLALALVFITACGASKNSNASSSKARTIDEIKKSGELRIAVFGDKKPFGYVDNDGSYQ 69 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR--EISLG 115 G+D++ L+ D K++Y+ ++A R L S ++DI N T R ++ Sbjct: 70 GYDIELGNQLAK---DLGVKVKYVSVDAANRAEYLISNKVDITLANFTVTDERKKQVDFA 126 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 L + ++ G + K I V +L G ++ V GTT E YF+ K HP V Sbjct: 127 LPYMKVSL----GVVSPKDALIKDVKELKGKTLIVTKGTTAET----YFE----KNHPEV 174 Query: 176 -FERVEEIDAAYRA---HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 ++ ++ AY+A R DA++ D + + A L N V + + +APA+ Sbjct: 175 KLQKYDQYSDAYQALLDGRGDAFSTDNTEVLAWALEN--KGYEVGITSLGDPDTIAPAVQ 232 Query: 232 QGDTEWYNIVS 242 +G+ E + ++ Sbjct: 233 KGNKELLDFIN 243 >gi|119025524|ref|YP_909369.1| solute-binding protein for glutamate_aspartate ABC transporter system [Bifidobacterium adolescentis ATCC 15703] gi|118765108|dbj|BAF39287.1| probable solute-binding protein for glutamate_aspartate ABC transporter system [Bifidobacterium adolescentis ATCC 15703] Length = 301 Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 61/226 (26%), Positives = 101/226 (44%), Gaps = 19/226 (8%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 T+ A L +IKK G LK + + F + +G G+D+ F L+ D K Sbjct: 48 TTSKVTARSLDEIKKSGVLKVAVFSDKAPFGYIDKDGKNAGYDIVFAERLAK---DLGVK 104 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++Y ++ R L S ++DI N T R+ + A +P G + + I Sbjct: 105 VKYTSVDPAARVDVLTSNKVDITLANFTVTDERKEKVDFA-KPYMKV-ALGVVSPENAEI 162 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV-FERVEEIDAAYRA---HRCDA 193 + VSQL G ++ + GTT E YF+ K P V ++ ++ AY A R DA Sbjct: 163 TDVSQLKGKTLIIAKGTTAE----SYFE----KNEPDVKLQKYDQYADAYNALLDGRGDA 214 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 ++ D + + A TN V + + + +APA+ +G+ E N Sbjct: 215 FSTDNTEVLAWAKTN--KGFKVGITKLGDEDTIAPAVQKGNKELLN 258 >gi|225350813|ref|ZP_03741836.1| hypothetical protein BIFPSEUDO_02383 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225158269|gb|EEG71511.1| hypothetical protein BIFPSEUDO_02383 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 302 Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 59/219 (26%), Positives = 100/219 (45%), Gaps = 20/219 (9%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L +IKK G LK + + F V +G++ G+DV F L + D ++Y ++A Sbjct: 57 LDEIKKSGKLKVAVFSDKAPFGYVDKDGNYAGYDVYFAERLGKDLGVD---VEYTSVDAA 113 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 R L S ++DI N T R+ + A +P G + + I+ V QL G Sbjct: 114 ARVDVLTSNKVDITLANFTVTDERKEKVDFA-KPYMKV-ALGVVSPENAEITDVDQLKGK 171 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA---HRCDAYTGDISALYA 203 ++ V GTT E +F+ + Y I ++ ++ AY A R DA++ D + + A Sbjct: 172 TLIVTKGTTAET----FFEKN---YPDIKLQKYDQYADAYNALLDGRGDAFSTDNTEVLA 224 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE---WYN 239 +N V + ++ K +A A+ +G+ E W N Sbjct: 225 WAKSN--KGFKVGITELGDKDTIAAAVQKGNKELLDWIN 261 >gi|166367483|ref|YP_001659756.1| extracellular solute-binding protein [Microcystis aeruginosa NIES-843] gi|166089856|dbj|BAG04564.1| extracellular solute-binding protein [Microcystis aeruginosa NIES-843] Length = 299 Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 55/250 (22%), Positives = 107/250 (42%), Gaps = 13/250 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M + V + + + ++ S+ A +I I+K G + G + F V + G W G+ Sbjct: 1 MKRTLAVMTMTVALTLTSNHSSLAGAIFDRIQKTGVITAGARKDAIPFGFVNSQGKWVGY 60 Query: 60 DVD---FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +D R + P K++ + + + RF L++ IDI +T +T RE + Sbjct: 61 SLDMLELIRKETERKLGKPIKLKIVEITPQNRFEKLKTGVIDIECGSTTFTWKRENEVDF 120 Query: 117 AFRPITYF-DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + ++YF G + K + + L+G I V A TT E + A + Sbjct: 121 S---VSYFAGGTQLLTRKGSNLDDIGSLAGRRIGVIANTTNEAVIKTQQPAAILVKVKNR 177 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI-ISKSPLAPAIIQGD 234 E +++++A D + D L L+ + P+ I+P + A + + D Sbjct: 178 GEGLQKLEAG----EIDGFASDGITLEGLRKSAKNPNNLAIVPSYPYAYESYACTLPEND 233 Query: 235 TEWYNIVSWT 244 ++W + V++T Sbjct: 234 SKWRDTVNYT 243 >gi|226359784|ref|YP_002777562.1| ABC transporter substrate-binding protein [Rhodococcus opacus B4] gi|226238269|dbj|BAH48617.1| putative ABC transporter substrate-binding protein [Rhodococcus opacus B4] Length = 340 Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 39/137 (28%), Positives = 67/137 (48%), Gaps = 7/137 (5%) Query: 27 LGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 L +I RG L G+ NT F + G +GFD+D + ++ IF DP+K+++ L Sbjct: 95 LAEIASRGRLIVGVDQNTNPFSFRD-PTTGTLQGFDIDVAKEITKDIFGDPAKVEFRLLT 153 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG-QGFIMHKKKGISSVSQL 143 + RF AL+ +D++ T T R +G + YF Q ++ + I+ + L Sbjct: 154 SAGRFSALEQNDVDVVVHATAITCERARRVGFS---TEYFRAFQRILVPRGSDITGPADL 210 Query: 144 SGASICVQAGTTTELTL 160 +G +C TT+ T+ Sbjct: 211 AGKRVCTFVDTTSLPTV 227 >gi|154486962|ref|ZP_02028369.1| hypothetical protein BIFADO_00799 [Bifidobacterium adolescentis L2-32] gi|154084825|gb|EDN83870.1| hypothetical protein BIFADO_00799 [Bifidobacterium adolescentis L2-32] Length = 301 Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 61/226 (26%), Positives = 101/226 (44%), Gaps = 19/226 (8%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 T+ A L +IKK G LK + + F + +G G+D+ F L+ D K Sbjct: 48 TTSKVTARSLDEIKKSGVLKVAVFSDKAPFGYIDKDGKNAGYDIVFAERLAK---DLGVK 104 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++Y ++ R L S ++DI N T R+ + A +P G + + I Sbjct: 105 VKYTSVDPAARVDVLTSNKVDITLANFTVTDERKEKVDFA-KPYMKV-ALGVVSPENAEI 162 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV-FERVEEIDAAYRA---HRCDA 193 + VSQL G ++ + GTT E YF+ K P V ++ ++ AY A R DA Sbjct: 163 TDVSQLKGKTLIIAKGTTAE----SYFE----KNEPDVKLQKYDQYADAYNALLDGRGDA 214 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 ++ D + + A TN V + + + +APA+ +G+ E N Sbjct: 215 FSTDNTEVLAWAKTN--KGFKVGITKLGDEDTIAPAVQKGNKELLN 258 >gi|224372632|ref|YP_002607004.1| extracellular solute-binding protein, family 3 [Nautilia profundicola AmH] gi|223588682|gb|ACM92418.1| extracellular solute-binding protein, family 3 [Nautilia profundicola AmH] Length = 260 Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 49/192 (25%), Positives = 83/192 (43%), Gaps = 11/192 (5%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 + ++ +F T+ S A +L D++ RG LK G+ F V + G GFD+D + + Sbjct: 6 AFFVILGMFLTTAS--ADLLKDVQSRGVLKAGVKYDFPPFGYVNSKGQVVGFDIDLIKYI 63 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + P Q + +K R +QS IDI + + + R+ L + F YFDGQ Sbjct: 64 AKKLGVKPVFTQ---VTSKTRIPMVQSGTIDIAAASMTHKVKRD--LPIDFTISYYFDGQ 118 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 + K S +G + V G T+ D FK + F+ + A + Sbjct: 119 SILARKDCKAKSYKDFAGKRVGVIQGATS----GDNFKRVCPGVKLVYFQEYPQAVMALK 174 Query: 188 AHRCDAYTGDIS 199 + DA + D + Sbjct: 175 RGKIDAVSTDYT 186 >gi|163735254|ref|ZP_02142689.1| amino-acid ABC transporter, periplasmic binding protein [Roseobacter litoralis Och 149] gi|161391468|gb|EDQ15802.1| amino-acid ABC transporter, periplasmic binding protein [Roseobacter litoralis Och 149] Length = 278 Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 61/235 (25%), Positives = 101/235 (42%), Gaps = 8/235 (3%) Query: 11 CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70 LI + A L IK+ G L G T + + N + KG+ C L+S Sbjct: 7 ALIAAILMPAAAQAQTLERIKENGQLVIGFRTDAAPLSYLGEN-EPKGYTPTVCYVLASK 65 Query: 71 I---FDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 I + P +I + P+ A+ RF + + ID+L TL R + F Y DG Sbjct: 66 IAAAVELPDMEIIFRPVTAENRFEEVANGNIDLLCGAATITLERRELVD--FSVPVYVDG 123 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 ++ KK G S+ +L+G + V++ TTT L + A ++ +VF+ AA Sbjct: 124 TVVVL-KKDGPESLDELAGMKVGVRSATTTLDALQNSLNAADIAAEVVVFDDHPTGMAAL 182 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 AY D S L + ++ + + +++ A+ +GDTE+ IV Sbjct: 183 EQDEITAYFADQSILMNMVAQSEVADDLKVFDQLLTVEKQGLAMARGDTEFRLIV 237 >gi|229114241|ref|ZP_04243662.1| hypothetical protein bcere0017_5430 [Bacillus cereus Rock1-3] gi|228669261|gb|EEL24682.1| hypothetical protein bcere0017_5430 [Bacillus cereus Rock1-3] Length = 275 Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 17/209 (8%) Query: 30 IKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 IKKRG L G+ +T L G + G +GFDVD +AL+ I D K++ + +K Sbjct: 45 IKKRGKLVVGVKNDTNLFGLKN-PSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKT 103 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK---KGISSVSQLS 144 R L++ ID + T+ E + F + + GQ ++ K KGI + Q Sbjct: 104 RIPLLKNGDIDAIIAT--MTITEERKKEVDFSDVYFKAGQSLLVKKGSNIKGIDDIKQ-- 159 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G + G+T+ + + + + + FE E +A + D T D + LY + Sbjct: 160 GVKVLAVKGSTS----TNNIRQKSPEATVLEFENYSEAFTGLKAGKGDVLTTDNAILYGM 215 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + S + ++ I + P A+ +G Sbjct: 216 ---AKQDSNYEVVGKIFTDEPYGIAVQKG 241 >gi|207723710|ref|YP_002254108.1| amino-acid-binding periplasmic protein [Ralstonia solanacearum MolK2] gi|206588914|emb|CAQ35876.1| amino-acid-binding periplasmic protein [Ralstonia solanacearum MolK2] Length = 284 Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 62/240 (25%), Positives = 104/240 (43%), Gaps = 17/240 (7%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVK--ANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 A L DIKK+G L CG+ F+ +K + + G+DVD C A++ ++ P Q Sbjct: 31 ADQLSDIKKKGELVCGVLGTDEPFSFLKDPMSREIVGYDVDMCNAVAKSLGVKPVLKQ-- 88 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 L R LQ ++D+L+ + RE + F T+ GQ ++ K GI++++ Sbjct: 89 -LAVAARIPELQQGRVDLLAASLTHNKERETQID--FSVSTFITGQKAMVRKDSGITTLA 145 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIV-FERVEEIDAAYRAHRCDAYTGDISA 200 QL G + G+T E + H +K IV F+ + A + + AY D + Sbjct: 146 QLDGKKVLTVKGSTMEANI-----GHAIKNADIVSFDNSPQALLALQQGKGAAYVNDETT 200 Query: 201 LYA-LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L + ++ I+P +S A I + + + V+ M E G QK Sbjct: 201 LIGNMAKLGPASKDYAIVPQNLSTEHFALGIRKNEPAFREQVNKVLLGM---EASGDAQK 257 >gi|83746551|ref|ZP_00943602.1| Hypothetical Protein RRSL_03550 [Ralstonia solanacearum UW551] gi|207743861|ref|YP_002260253.1| amino-acid-binding periplasmic protein [Ralstonia solanacearum IPO1609] gi|83726882|gb|EAP74009.1| Hypothetical Protein RRSL_03550 [Ralstonia solanacearum UW551] gi|206595261|emb|CAQ62188.1| amino-acid-binding periplasmic protein [Ralstonia solanacearum IPO1609] Length = 284 Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 62/240 (25%), Positives = 104/240 (43%), Gaps = 17/240 (7%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVK--ANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 A L DIKK+G L CG+ F+ +K + + G+DVD C A++ ++ P Q Sbjct: 31 ADQLSDIKKKGELVCGVLGTDEPFSFLKDPMSREIVGYDVDMCNAVAKSLGVKPVLKQ-- 88 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 L R LQ ++D+L+ + RE + F T+ GQ ++ K GI++++ Sbjct: 89 -LAVAARIPELQQGRVDLLAASLTHNKERETQID--FSVSTFITGQKAMVRKDSGITTLA 145 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIV-FERVEEIDAAYRAHRCDAYTGDISA 200 QL G + G+T E + H +K IV F+ + A + + AY D + Sbjct: 146 QLDGKKVLTVKGSTMEANI-----GHAIKNADIVSFDNSPQALLALQQGKGAAYVNDETT 200 Query: 201 LYA-LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L + ++ I+P +S A I + + + V+ M E G QK Sbjct: 201 LIGNMAKLGPASKDYAIVPQNLSTEHFALGIRKNEPAFREQVNKVLLGM---EASGDAQK 257 >gi|299066140|emb|CBJ37323.1| putative amino-acid-binding periplasmic abc transporter protein [Ralstonia solanacearum CMR15] Length = 284 Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 47/187 (25%), Positives = 84/187 (44%), Gaps = 11/187 (5%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK--ANGDWKGFDVDFCRALSSAIFDD 74 + A L D+KK+G L CG+ F+ +K + + G+DVD C A++ ++ Sbjct: 24 LAAVPAKADQLADVKKKGELVCGVLGTDEPFSFLKDPMSREIVGYDVDMCHAVAKSLGVK 83 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 P Q L R LQ ++D+L+ + RE + + T+ GQ ++ K Sbjct: 84 PVLKQ---LAVAARIPELQQGRVDLLAASLTHNKEREAQIDFSLS--TFVTGQKAMVRKD 138 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 GI+S++QL G + G+T E + K ++ + F+ + A + + AY Sbjct: 139 SGITSLAQLDGKKVLTVKGSTMEANIGKAIKNADI----VSFDNSPQALLALQQGKGAAY 194 Query: 195 TGDISAL 201 D + L Sbjct: 195 VNDETTL 201 >gi|56750285|ref|YP_170986.1| polar amino acid transport system substrate-binding protein [Synechococcus elongatus PCC 6301] gi|81300085|ref|YP_400293.1| extracellular solute-binding protein [Synechococcus elongatus PCC 7942] gi|56685244|dbj|BAD78466.1| polar amino acid transport system substrate-binding proetin [Synechococcus elongatus PCC 6301] gi|81168966|gb|ABB57306.1| extracellular solute-binding protein, family 3 [Synechococcus elongatus PCC 7942] Length = 260 Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 26/88 (29%), Positives = 52/88 (59%), Gaps = 3/88 (3%) Query: 16 FFTSFSTNASILGD---IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72 FF +T+ +I D IK+RG+L G+ + + A G W+GF+VD R+L++ + Sbjct: 24 FFYGANTSGTIAADLETIKRRGYLIVGVQANVAPLSWQDAQGQWQGFEVDLARSLAAELL 83 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDIL 100 + + +++ L +++R AL + ++D+L Sbjct: 84 GNSAAVRFEGLQSRDRLPALLADRVDLL 111 >gi|154686884|ref|YP_001422045.1| GlnH [Bacillus amyloliquefaciens FZB42] gi|154352735|gb|ABS74814.1| GlnH [Bacillus amyloliquefaciens FZB42] Length = 275 Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 11/219 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSK 77 S T L IK R + G+ T F + ++GD +GFD+D + L+ I D K Sbjct: 33 SKGTGKDTLASIKDRDKIIFGVKTDTRLFGLKNPSSGDIEGFDIDISKQLAKDILGDEKK 92 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++ + +K R LQ+ ID ++ T+ E + F + + GQ ++ K I Sbjct: 93 AEFKEVTSKTRIPMLQNGDIDAITAT--MTITDERKKEVDFSDVYFEAGQSLLVKKGSSI 150 Query: 138 SSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 S L G+ + G+T+ + + KA + + FE E A +A + DA T Sbjct: 151 KSTEDLGKGSKVLAVKGSTSSQNIRE--KAPDA--SVLEFENYAEAFTALKAGQGDALTT 206 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 D + LY + D ++ + + + P A+ +G + Sbjct: 207 DNAILYGM---ADENKQYQLTGETFTDEPYGIAVKKGQS 242 >gi|17546976|ref|NP_520378.1| amino-acid-binding periplasmic ABC transporter protein [Ralstonia solanacearum GMI1000] gi|17429277|emb|CAD15964.1| probable amino-acid-binding periplasmic abc transporter protein [Ralstonia solanacearum GMI1000] Length = 284 Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 48/187 (25%), Positives = 84/187 (44%), Gaps = 11/187 (5%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK--ANGDWKGFDVDFCRALSSAIFDD 74 + A L D+KK+G L CG+ F+ +K + + G+DVD C A++ ++ Sbjct: 24 LAAVPAKADQLADVKKKGELVCGVLGTDEPFSFLKDPMSREIVGYDVDMCNAVAKSLGVK 83 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 P Q L R LQ ++D+L+ + RE + F T+ GQ ++ K Sbjct: 84 PVLKQ---LAVAARIPELQQGRVDLLAASLTHNKEREAQID--FSVSTFVTGQKAMVRKD 138 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 GI+S++QL G + G+T E + K ++ + F+ + A + + AY Sbjct: 139 SGITSLAQLDGKKVLTVKGSTMEANIGKTIKNADI----VSFDNSPQALLALQQGKGAAY 194 Query: 195 TGDISAL 201 D + L Sbjct: 195 VNDETTL 201 >gi|322516689|ref|ZP_08069599.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus vestibularis ATCC 49124] gi|322124783|gb|EFX96218.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus vestibularis ATCC 49124] Length = 224 Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 43/180 (23%), Positives = 86/180 (47%), Gaps = 6/180 (3%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYL 81 N++ + I K+G L G+ + F A + ++G ++D + ++ + K+ + Sbjct: 38 NSAAIQKIVKKGTLNVGVKQDVPNFGYYSAKTNTYQGMEIDLAKKIAKKL---KVKVNFT 94 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 + + R + + ID+L +T+ E A Y+D GF++ K G +S Sbjct: 95 AVTPQTREALMDNGTIDMLIAT--YTITDERKASYAMSNPYYYDQIGFLVQTKSGYKKLS 152 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L+G +I V G++ + + +Y A+N+K+ + E+ + A+R DA+ GD S L Sbjct: 153 DLNGKTIGVSQGSSAKTAVEEYASANNLKFDYVQLGSYPELAVSLYAYRIDAFAGDKSIL 212 >gi|163868657|ref|YP_001609866.1| amino-acid ABC transporter binding protein [Bartonella tribocorum CIP 105476] gi|161018313|emb|CAK01871.1| amino-acid ABC transporter binding protein [Bartonella tribocorum CIP 105476] Length = 301 Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 58/234 (24%), Positives = 95/234 (40%), Gaps = 14/234 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + I I + L IK+ G + G+ G A N + GF Sbjct: 1 MKKSLLMFIAAAAIGLTSGAHAENDTLEKIKQTGEITLGVRES-SGLAYALGNNKYVGFH 59 Query: 61 VDFCRALSSAIFDDPSK-------IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 + ++ I DD SK I YLP+ ++ R L++K D +T + R S Sbjct: 60 TE----MAEHIIDDISKKIGKSIKIHYLPITSQNRIPLLKNKTYDFECGSTTNDIAR--S 113 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 AF TY + + K I S+ L+G + GTT+ + +A N+ + Sbjct: 114 KEAAFAYTTYVEEVRIAVKKNSNIKSLDDLNGKIVATTTGTTSVQLIRKNKRAKNIHFKV 173 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 + + + + R DA+ D S L + PS++VIL ++S P+A Sbjct: 174 VKGKDHGDSFLLLESGRADAFVMDASILAGHIAKSKNPSDYVILDTVLSVEPIA 227 >gi|121606347|ref|YP_983676.1| extracellular solute-binding protein [Polaromonas naphthalenivorans CJ2] gi|120595316|gb|ABM38755.1| amino acid ABC transporter substrate-binding protein, PAAT family [Polaromonas naphthalenivorans CJ2] Length = 299 Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 55/254 (21%), Positives = 115/254 (45%), Gaps = 6/254 (2%) Query: 5 FFVSILCLIILFFTS-FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 F ++ L L +L + F+ + + +K G + G+ + +G + G+ V+ Sbjct: 3 FKIATLTLALLASGAVFAQASDTVAKVKASGVVTMGVRDSSGALSYTLGDGKYVGYHVEI 62 Query: 64 CRALSSAIFDDPSK---IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 C+ + + + + ++Y P+ ++ R +Q+ +DI +T R + +AF Sbjct: 63 CQRILANLEKAAGRKLEVKYQPVTSQNRIPLVQNGTVDIECGSTTNNATR--AKDVAFLH 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 T+ + + GI+SV+QL+G ++ GTT+ TL +A N+ ++ I + Sbjct: 121 TTFVEEVRIAVKTSSGITSVAQLNGKNVATTTGTTSVQTLRRNERATNVNFNEIFGKDHS 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + + R DA+ D S L + P++ I+ +++S P+A I + D I Sbjct: 181 DSFLLLESGRADAFVMDGSILAGNIASAKNPADFKIVGEVLSVEPIAIMIRKDDAGLKKI 240 Query: 241 VSWTHYAMVTAEEL 254 T ++ + EL Sbjct: 241 GDDTINGLIKSGEL 254 >gi|312862681|ref|ZP_07722921.1| putative major cell-binding factor [Streptococcus vestibularis F0396] gi|311101541|gb|EFQ59744.1| putative major cell-binding factor [Streptococcus vestibularis F0396] Length = 277 Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 43/180 (23%), Positives = 86/180 (47%), Gaps = 6/180 (3%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYL 81 N++ + I K+G L G+ + F A + ++G ++D + ++ + K+ + Sbjct: 38 NSAAIQKIVKKGTLNVGVKQDVPNFGYYSAKTNTYQGMEIDLAKKIAKKL---KVKVNFT 94 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 + + R + + ID+L +T+ E A Y+D GF++ K G +S Sbjct: 95 AVTPQTREALMDNGTIDMLIAT--YTITDERKASYAMSNPYYYDQIGFLVQTKSGYKKLS 152 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L+G +I V G++ + + +Y A+N+K+ + E+ + A+R DA+ GD S L Sbjct: 153 DLNGKTIGVSQGSSAKTAVEEYASANNLKFDYVQLGSYPELAVSLYAYRIDAFAGDKSIL 212 >gi|110347317|ref|YP_666134.1| extracellular solute-binding protein [Mesorhizobium sp. BNC1] gi|110287493|gb|ABG65551.1| amino acid ABC transporter substrate-binding protein, PAAT family [Chelativorans sp. BNC1] Length = 289 Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 65/258 (25%), Positives = 109/258 (42%), Gaps = 16/258 (6%) Query: 21 STNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 + A L DIK RG L CG+ N+ G+ E N G+++D C+ L+ + P+ Sbjct: 34 AAEAGTLDDIKARGELICGVLGNSEPFGY-EDPGNRQVVGYEIDLCKDLAGTMDVTPTIK 92 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 P + R LQ ++D+L+ +T E + + F D ++ K GI+ Sbjct: 93 VIAP---QARIPELQQGRVDLLAALISYT--NERAEQVDFSNTYLVDSFRCMVKKDSGIT 147 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + L+ I VQ G E L F + + V ER A CD T Sbjct: 148 GLDGLADKRISVQKGGLIEAALRSQFPNATVLSYDDVSERFVAFQQGKAAATCDRAT--- 204 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 L AL++ + ILP+ ++ A A+ +GD ++ V + + + T E G Sbjct: 205 -LLRALQIRAKNEATTTILPEALNMMQKAGFAVRKGDKDF---VDYLNQFLATYESSGKG 260 Query: 258 QKNINQVSKDTTNPDVQR 275 Q ++ ++N D+ R Sbjct: 261 QALFDRWVGASSNYDLSR 278 >gi|306823349|ref|ZP_07456724.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Bifidobacterium dentium ATCC 27679] gi|304553056|gb|EFM40968.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Bifidobacterium dentium ATCC 27679] Length = 311 Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 63/225 (28%), Positives = 101/225 (44%), Gaps = 22/225 (9%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 T A L +IKK G LK + + F V +G++ G+DV F L+ D K Y Sbjct: 61 TTARTLDEIKKSGELKVAVFSDKAPFGYVDKDGNYAGYDVYFAERLAK---DLGVKAAYT 117 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 ++ R L S ++D+ N T R+ + A +P G + + I+ VS Sbjct: 118 SVDPAARVDVLTSNKVDVTLANFTVTDERKEKVDFA-KPYMKV-ALGVVSPEGAEITDVS 175 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHP-IVFERVEEIDAAYRA---HRCDAYTGD 197 QL G ++ V GTT E YF+ K P I ++ ++ AY A R DA++ D Sbjct: 176 QLKGKTLIVAKGTTAET----YFE----KNEPDIKLQKYDQYADAYNALLDGRGDAFSTD 227 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE---WYN 239 + + A +N V + + + +APA+ +G+ E W N Sbjct: 228 NTEVLAWAKSN--KGFKVGITKLGDEDTIAPAVQKGNKELLDWIN 270 >gi|330808725|ref|YP_004353187.1| putative amino acid ABC transporter, periplasmic component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327376833|gb|AEA68183.1| putative amino acid ABC transporter, periplasmic component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 282 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 55/235 (23%), Positives = 101/235 (42%), Gaps = 17/235 (7%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L + +RG L G + + A+G +GFD+D R ++ +F+DP K++++ + Sbjct: 30 SKLDSVLQRGKLIVGTGSTNAPWHFQGADGKLQGFDIDIARMVAKGLFNDPEKVEFVVQS 89 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 + R L + ++D+ + T R + +AF Y +G G ++ + L Sbjct: 90 SDARIPNLLTDKVDMSCQFITVTASR--AQQVAFTLPYYREGVGLLLPANSKYKEIEDLK 147 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA------AYRAHRCDAYTGDI 198 AG + + A + + + +V++ D+ A + R DA D Sbjct: 148 A------AGDGVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLMYQAVNSGRADAAATDQ 201 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT-HYAMVTAE 252 S++ L + N P + S A A+ +GD +W N V+ T H AM E Sbjct: 202 SSVKYLMVQN--PGRYRSPAYAWSPQTYACAVKRGDQDWLNFVNTTLHEAMTGVE 254 >gi|309802692|ref|ZP_07696796.1| ABC transporter, substrate-binding protein, family 3 [Bifidobacterium dentium JCVIHMP022] gi|308220756|gb|EFO77064.1| ABC transporter, substrate-binding protein, family 3 [Bifidobacterium dentium JCVIHMP022] Length = 301 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 63/225 (28%), Positives = 101/225 (44%), Gaps = 22/225 (9%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 T A L +IKK G LK + + F V +G++ G+DV F L+ D K Y Sbjct: 51 TTARTLDEIKKSGELKVAVFSDKAPFGYVDKDGNYAGYDVYFAERLAK---DLGVKAAYT 107 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 ++ R L S ++D+ N T R+ + A +P G + + I+ VS Sbjct: 108 SVDPAARVDVLTSNKVDVTLANFTVTDERKEKVDFA-KPYMKV-ALGVVSPEGAEITDVS 165 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHP-IVFERVEEIDAAYRA---HRCDAYTGD 197 QL G ++ V GTT E YF+ K P I ++ ++ AY A R DA++ D Sbjct: 166 QLKGKTLIVAKGTTAET----YFE----KNEPDIKLQKYDQYADAYNALLDGRGDAFSTD 217 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE---WYN 239 + + A +N V + + + +APA+ +G+ E W N Sbjct: 218 NTEVLAWAKSN--KGFKVGITKLGDEDTIAPAVQKGNKELLDWIN 260 >gi|327192287|gb|EGE59252.1| extracellular solute-binding protein family 3 [Rhizobium etli CNPAF512] Length = 307 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 64/274 (23%), Positives = 116/274 (42%), Gaps = 17/274 (6%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V L + L T + S L ++ RG L G + + A+ +GFDVD Sbjct: 37 VMSLAVAALMSTPALADGSKLDEVLARGHLVLGTGSTNAPWHFKSADDKLQGFDVDMGHI 96 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 ++ A+F DP KI+Y+ ++ R + + ++DI + T+ E + +AF Y +G Sbjct: 97 IAKALFGDPEKIEYVNQSSDARIPNITTDKVDITCQFM--TVTGERAQQVAFTIPYYREG 154 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI---VFERVEEID 183 G ++ + + L AG++ +++ A M + + ++ E +D Sbjct: 155 VGLMLKADGKYADYAALKA------AGSSVTISVLQNVYAEAMVHAALPEATVDQYESVD 208 Query: 184 AAYRA---HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 Y+A R DA D S+L A +T + P + + A A+ +GD +W N Sbjct: 209 LIYQALESGRADAVATDQSSL-AWYMTQN-PGRYKDAGYGWNPQTYACAVKRGDQDWLNF 266 Query: 241 VSWTHYAMVTAEELGITQKNINQ-VSKDTTNPDV 273 V+ + +T E K+ KD P + Sbjct: 267 VNTALHEAMTGVEFDFYAKSFKTWFGKDLAPPQI 300 >gi|146311435|ref|YP_001176509.1| extracellular solute-binding protein [Enterobacter sp. 638] gi|145318311|gb|ABP60458.1| amino acid ABC transporter substrate-binding protein, PAAT family [Enterobacter sp. 638] Length = 276 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 60/242 (24%), Positives = 98/242 (40%), Gaps = 11/242 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFD 60 Y+ +++ L S A L DIK G +K F + D G+D Sbjct: 8 YQQLVLALGLLTAGGILSTPAQADQLADIKAAGVVKVATFDANPPFGSIDPKTHDIVGYD 67 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDF +AL+ + K++ + N R LQS + D++ D T+ E + + F Sbjct: 68 VDFAKALAKTLG---VKLELVATNPANRIPLLQSGKADLIV--ADITITPERAQVIDFST 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + GQ F++ K + S A I GTT E L F + + ++ + Sbjct: 123 PYFVTGQQFLVPVKSA-DKLDDYSKARIGAVKGTTGEQALHQRFPQSRV----LSYDDIP 177 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A R A T D + L L + ILPD++SK + + +G+T N+ Sbjct: 178 LALTALRNGNVQAITQDSTILAGLLSQAPDKANFKILPDLLSKEEIGVGVKKGETALLNV 237 Query: 241 VS 242 V+ Sbjct: 238 VN 239 >gi|237650055|ref|ZP_04524307.1| amino acid ABC transporter periplasmic protein [Streptococcus pneumoniae CCRI 1974] gi|237822716|ref|ZP_04598561.1| amino acid ABC transporter periplasmic protein [Streptococcus pneumoniae CCRI 1974M2] gi|332075991|gb|EGI86457.1| putative amino-acid transporter periplasmic solute-binding protein [Streptococcus pneumoniae GA41301] Length = 288 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 57/228 (25%), Positives = 106/228 (46%), Gaps = 23/228 (10%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + A + +IKK G L+ + F V +G ++G+D++ L+ D K++Y Sbjct: 37 TAKARTIDEIKKSGELRIAVFGDKKLFGYVDNDGSYQGYDIELGNQLAQ---DLGVKVKY 93 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKKGIS 138 + ++A R L S ++DI+ N T R ++ L + ++ G + K I+ Sbjct: 94 ISVDAANRAEYLISNKVDIILANFTVTDERKKQVDFALPYMKVSL----GVVSPKTGLIT 149 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP-IVFERVEEIDAAYRA---HRCDAY 194 V QL G ++ V GTT E YF+ K HP I ++ ++ +Y+A R DA+ Sbjct: 150 DVKQLEGKTLIVTKGTTAET----YFE----KNHPEIKLQKYDQYSDSYQALLDGRGDAF 201 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + D + + A L N V + + +A A+ +G+ E + ++ Sbjct: 202 STDNTEVLAWALEN--KGFEVGITSLGDPDTIAAAVQKGNQELLDFIN 247 >gi|17545692|ref|NP_519094.1| amino-acid-binding periplasmic (PBP) ABC transporter protein [Ralstonia solanacearum GMI1000] gi|17427986|emb|CAD14675.1| probable amino-acid-binding periplasmic (pbp) abc transporter protein [Ralstonia solanacearum GMI1000] Length = 303 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 54/252 (21%), Positives = 107/252 (42%), Gaps = 15/252 (5%) Query: 8 SILCLIILFF---TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 ++LC + F T+ ++ +L I+ G ++ F+ A+ G+ VD C Sbjct: 12 ALLCTSLSIFSPGTALASTTPVLDRIRDTGIVRIAHRESASPFSYYDADKKPVGYAVDLC 71 Query: 65 ----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 L + + K+QY+ + R +Q + D+ T T RE +AF Sbjct: 72 LRVVDKLRTELKRPDLKVQYVLVTPSTRIPTIQEGKADLECSTT--TNNRERREQVAFTI 129 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G ++ GI L ++ GTT+ +A+ K ++ + I FE V+ Sbjct: 130 PHYIAGIRMLVKTASGIHRWDDLRDKTVVSTKGTTS---VAELRKMNDSRVLRIKFEEVK 186 Query: 181 EIDAAY---RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E A+ + + DA+ D LY+ + P ++ ++ D+++ P A + + D ++ Sbjct: 187 EHAEAFAMVESGKADAFVMDDVQLYSFRANAKHPQDYTVVGDMMTVEPYAIMLSKSDPDF 246 Query: 238 YNIVSWTHYAMV 249 +V A++ Sbjct: 247 KRMVDRAMTAII 258 >gi|172041410|ref|YP_001801124.1| putative extracellular solute-binding protein [Corynebacterium urealyticum DSM 7109] gi|171852714|emb|CAQ05690.1| putative extracellular solute-binding protein [Corynebacterium urealyticum DSM 7109] Length = 382 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 37/125 (29%), Positives = 68/125 (54%), Gaps = 7/125 (5%) Query: 29 DIKKRGFLKCGINTGL--VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 +I KRG L G+ L +G+ + +++ D GF+VD R ++ IF DP K+++ + ++ Sbjct: 92 NISKRGRLIVGVAQSLYRLGYRDSESS-DLIGFEVDLAREIARDIFGDPDKVEFRYVESR 150 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSG 145 R AL++ +D++ R T R+ +L + I Y Q ++ +K GI SV+ L Sbjct: 151 HREEALRTGDVDLVLRTMTTTRKRQKALEFS---IPYLHVQERLLTQKGSGIESVADLKH 207 Query: 146 ASICV 150 ++C Sbjct: 208 KTVCA 212 >gi|257461486|ref|ZP_05626582.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] gi|257441209|gb|EEV16356.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] Length = 268 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 43/150 (28%), Positives = 77/150 (51%), Gaps = 5/150 (3%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 I+ I+L FTS S A+ L +I++ G ++ G+ F++ + +G ++GF+V ALS Sbjct: 4 IILGILLLFTS-SVVANTLSEIRQSGSVRVGVFEAQPPFSKFE-DGKFQGFEVTLAEALS 61 Query: 69 SAIFDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 IF + K++++P+ A ER L+ ++D++ +T+ E + F + Sbjct: 62 KDIFGGKAGKVEFVPVKASERLKVLEENKVDMVLAT--FTITNERKQLVDFTTPYFAVNI 119 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTE 157 G + I +VS L G I + GTT E Sbjct: 120 GVLTRAGDRIKTVSDLHGKPIIAETGTTGE 149 >gi|154508366|ref|ZP_02044008.1| hypothetical protein ACTODO_00863 [Actinomyces odontolyticus ATCC 17982] gi|293193556|ref|ZP_06609826.1| CjaA protein [Actinomyces odontolyticus F0309] gi|153798000|gb|EDN80420.1| hypothetical protein ACTODO_00863 [Actinomyces odontolyticus ATCC 17982] gi|292819912|gb|EFF78914.1| CjaA protein [Actinomyces odontolyticus F0309] Length = 300 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 65/251 (25%), Positives = 116/251 (46%), Gaps = 26/251 (10%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 IK+ G + GI + F + A+G G+DV + +++ D +Y+P++A R Sbjct: 54 IKEAGEIVIGIFSDKAPFGYIDADGKPAGYDVVYGDRIAA---DLGVTAKYVPVDAAART 110 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 L S ++DI N +T+ E + + F + G + I+ VSQL+G ++ Sbjct: 111 EVLASNKVDITLAN--FTVTPERAEKVDFANPYFKVSLGVVSPTSAEITDVSQLAGKTLI 168 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIV-FERVEEIDAAYRA---HRCDAYTGDISALYALK 205 V GTT E YF+A+ HP V ++ ++ AY+A R DA++ D + + A Sbjct: 169 VTKGTTAEA----YFEAN----HPEVKLQKYDQYSDAYQALEDGRGDAFSTDNTEVIAWA 220 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ-- 263 + + P V + + S +A A+ +G+T ++ W + +V + K+ Q Sbjct: 221 IQH--PGFSVGIKSLGETSYIAAAVKKGNTA---LLDWLNNQLVELGQENFFHKDYEQTL 275 Query: 264 --VSKDTTNPD 272 V D PD Sbjct: 276 APVYGDAATPD 286 >gi|75909655|ref|YP_323951.1| extracellular solute-binding protein [Anabaena variabilis ATCC 29413] gi|75703380|gb|ABA23056.1| amino acid ABC transporter substrate-binding protein, PAAT family [Anabaena variabilis ATCC 29413] Length = 271 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 51/227 (22%), Positives = 107/227 (47%), Gaps = 15/227 (6%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRA 66 I+C +I T + +A+ L +I++RG++ + N L+GF + A G+ +G ++D + Sbjct: 22 IICWMI-SATGLAASAAELPEIQRRGYITVAVKDNLPLLGFKD--AQGNLQGLEIDLAKR 78 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L++ + ++ P+N ++R + + Q+D+ T R S ++F Y DG Sbjct: 79 LAADLLGKADAVKLQPVNNRDRLPVVFNHQVDLAIARVTATESR--SRLVSFSVPYYMDG 136 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 +++ K + ++ L+ I V ++T + Y + + + +E AA Sbjct: 137 T-YLITKDVSVQQINDLATRKIAVLNNSSTIAEVRYYIPSAEL----VGVNSYQEAQAAI 191 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + A+ D S L D P ++ +LP +S +PL+ + +G Sbjct: 192 ENNSVAAFAADGSLLSG--WVRDNP-QYRLLPTKLSTAPLSVVMPKG 235 >gi|210611518|ref|ZP_03288938.1| hypothetical protein CLONEX_01128 [Clostridium nexile DSM 1787] gi|319936515|ref|ZP_08010930.1| extracellular solute-binding protein family 3 [Coprobacillus sp. 29_1] gi|210151965|gb|EEA82972.1| hypothetical protein CLONEX_01128 [Clostridium nexile DSM 1787] gi|319808407|gb|EFW04962.1| extracellular solute-binding protein family 3 [Coprobacillus sp. 29_1] Length = 290 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 56/220 (25%), Positives = 99/220 (45%), Gaps = 25/220 (11%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 +IKK G + G+ + F V NG+++G+D+ F L D KI Y+ A R Sbjct: 45 EIKKSGTINIGVFSDKAPFGYVDENGEYQGYDIYFAERLGK---DLGVKINYVSTEAANR 101 Query: 89 FLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SG 145 LQ+ ++D++ N T R E+ L + ++ G + HK+ I+ +SQ+ + Sbjct: 102 IEYLQTGKVDVILANFTVTDERAEEVDFALPYMNVSL----GVVSHKEHVITDLSQVGAD 157 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD---AYTGDISALY 202 + V +GTT E L Y I ++ + AA A A+ D + + Sbjct: 158 EQVIVISGTTAETYLT-------KNYPDIKLQKFDTYAAAKSAFENGTGVAWANDNTEVI 210 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT---EWYN 239 A N+ + + + + S +APA+ +G+T +W N Sbjct: 211 AFAKENEGYT--IGIDSLGSSDTIAPAVTKGNTSLLDWLN 248 >gi|305680314|ref|ZP_07403122.1| bacterial extracellular solute-binding protein, family 3 [Corynebacterium matruchotii ATCC 14266] gi|305659845|gb|EFM49344.1| bacterial extracellular solute-binding protein, family 3 [Corynebacterium matruchotii ATCC 14266] Length = 333 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 39/130 (30%), Positives = 67/130 (51%), Gaps = 7/130 (5%) Query: 29 DIKKRGFLKCGINTG--LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 +I RG L GI+ L+ F G+ +GF+VD + +++ IF DP+KI++ +++ Sbjct: 81 EIISRGRLIVGIDQSQNLLSFRNT-ITGELQGFEVDIAKEIAADIFGDPTKIEFRYVDSA 139 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM-HKKKGISSVSQLSG 145 +L+S QID+ R T R+ + F Y G I+ HK I +S++ G Sbjct: 140 NWIDSLESHQIDMAIRTLSITRDRQDQV---FFSTPYLKGSTKILVHKSSAIKGISEIGG 196 Query: 146 ASICVQAGTT 155 +CV + +T Sbjct: 197 RPVCVTSQST 206 >gi|149003314|ref|ZP_01828203.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus pneumoniae SP14-BS69] gi|147758497|gb|EDK65495.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus pneumoniae SP14-BS69] Length = 290 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 57/228 (25%), Positives = 106/228 (46%), Gaps = 23/228 (10%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + A + +IKK G L+ + F V +G ++G+D++ L+ D K++Y Sbjct: 37 TAKARTIDEIKKSGELRIAVFGDKKLFGYVDNDGSYQGYDIELGNQLAQ---DLGVKVKY 93 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKKGIS 138 + ++A R L S ++DI+ N T R ++ L + ++ G + K I+ Sbjct: 94 ISVDAANRAEYLISNKVDIILANFTVTDERKKQVDFALPYMKVSL----GVVSPKTGLIT 149 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP-IVFERVEEIDAAYRA---HRCDAY 194 V QL G ++ V GTT E YF+ K HP I ++ ++ +Y+A R DA+ Sbjct: 150 DVKQLEGKTLIVTKGTTAET----YFE----KNHPEIKLQKYDQYSDSYQALLDGRGDAF 201 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + D + + A L N V + + +A A+ +G+ E + ++ Sbjct: 202 STDNTEVLAWALEN--KGFEVGITSLGDPDTIAAAVQKGNQELLDFIN 247 >gi|55821555|ref|YP_139997.1| polar amino acid ABC uptake transporter substrate binding protein [Streptococcus thermophilus LMG 18311] gi|55737540|gb|AAV61182.1| polar amino acid ABC uptake transporter substrate binding protein [Streptococcus thermophilus LMG 18311] Length = 284 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 57/237 (24%), Positives = 103/237 (43%), Gaps = 21/237 (8%) Query: 11 CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70 C + A + +IKK G L+ + F V G ++G+D+ L+ Sbjct: 23 CSSNSSSGKSTAKARTIEEIKKSGELRIAVFADKKPFGYVDNKGAYQGYDIGLGNRLAKD 82 Query: 71 IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQG 128 + P +Y+ ++A R L S ++DI N T R ++ L + ++ G Sbjct: 83 LGVKP---KYVSVDAANRAEFLISNKVDITLANFTVTDERKKQVDFALPYMKVSI----G 135 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 + K K I V +L G ++ V GTT E YF+ + Y I ++ ++ AY+A Sbjct: 136 VVSPKDKVIKDVKELEGKTLIVTKGTTAET----YFEKN---YPNIKLQKYDQYSDAYQA 188 Query: 189 ---HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 R DA++ D + + A L N V + + +APA+ +G+ E + ++ Sbjct: 189 LLDGRGDAFSTDNTEVLAWALEN--KGYEVGITSLGDPDTIAPAVQKGNKELLDFIN 243 >gi|256380783|ref|YP_003104443.1| extracellular solute-binding protein family 3 [Actinosynnema mirum DSM 43827] gi|255925086|gb|ACU40597.1| extracellular solute-binding protein family 3 [Actinosynnema mirum DSM 43827] Length = 275 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 51/204 (25%), Positives = 96/204 (47%), Gaps = 10/204 (4%) Query: 2 YKDFFVSILCLIILFFTSF--STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 Y+ ++I +L T+ S + S L G L GI L G ++ + +G++ GF Sbjct: 3 YRKLVMAITGSAVLAATAACGSADQSTLEGKADDGALTIGIRYDLPGMSQRRIDGEFVGF 62 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD + +++ P+ I + + +R + S ++D++ N T R+ +G A Sbjct: 63 DVDVAKYVAAQFDVQPAGITWREVRPADREKLIASGEVDLVVANYSITEPRKQQVGFAG- 121 Query: 120 PITYFD-GQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 YF GQG ++ ++ I+ LSG +C GTT+ + + F A +++ + + Sbjct: 122 --PYFQTGQGLLVRATEEAITGTEALSGKKLCSVTGTTSAAKVKEEF-AQDVEL--VEYG 176 Query: 178 RVEEIDAAYRAHRCDAYTGDISAL 201 + + A A + DA T D + L Sbjct: 177 QYSDCVTALLAEKVDAVTTDEAIL 200 >gi|239817984|ref|YP_002946894.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] gi|239804561|gb|ACS21628.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] Length = 303 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 48/231 (20%), Positives = 97/231 (41%), Gaps = 6/231 (2%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS----AIFDDPSKIQYLP 82 L I++ G + G+ + G + GF V+ C + + A+ + ++Y Sbjct: 29 LKKIRESGAITMGVRDASGAMSFTLGPGSYTGFHVEVCERVVADIGRALQIEKIHVKYQL 88 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + + R +Q+ +DI T R+ + AF P Y +G + GI S +Q Sbjct: 89 VTPQNRIALVQNGTVDIECGTTTNNAARQKDV--AFAPTLYVEGVRIAVKAASGIVSPAQ 146 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 LSG ++ GTT+ L + + ++ + E + R D + D L Sbjct: 147 LSGKAVAATTGTTSVQLLRKLKREGAGEIAEVLAKDNSEGFLLLESGRVDGFAADGQILA 206 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 L + P+++ +L ++S P+A + +GD + +V + ++ + E Sbjct: 207 TLISKSREPAQYKLLDQVLSVEPIAIMLAKGDPAFKKLVDQSVVSLARSGE 257 >gi|182683628|ref|YP_001835375.1| amino acid (glutamine) ABC transporter substrate binding protein [Streptococcus pneumoniae CGSP14] gi|182628962|gb|ACB89910.1| amino acid (glutamine) ABC transporter substrate binding protein [Streptococcus pneumoniae CGSP14] Length = 286 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 57/228 (25%), Positives = 105/228 (46%), Gaps = 23/228 (10%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + A + +IKK G L+ + F V +G ++G+D++ L+ D K++Y Sbjct: 37 TAKARTIDEIKKSGELRIAVFGDKKPFGYVDNDGSYQGYDIELGNQLAQ---DLGVKVKY 93 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKKGIS 138 + ++A R L S ++DI N T R ++ L + ++ G + K I+ Sbjct: 94 ISVDAANRAEYLISNKVDITLANFTVTDERKKQVDFALPYMKVSL----GVVSPKTGLIT 149 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP-IVFERVEEIDAAYRA---HRCDAY 194 V QL G ++ V GTT E YF+ K HP I ++ ++ +Y+A R DA+ Sbjct: 150 DVKQLEGKTLIVTKGTTAET----YFE----KNHPEIKLQKYDQYSDSYQALLDGRGDAF 201 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + D + + A L D V + + +A A+ +G+ E + ++ Sbjct: 202 STDNTEVLAWAL--DNKGFEVGITSLGDPDTIAAAVQKGNQELLDFIN 247 >gi|148997221|ref|ZP_01824875.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus pneumoniae SP11-BS70] gi|168575367|ref|ZP_02721303.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus pneumoniae MLV-016] gi|307067313|ref|YP_003876279.1| amino acid ABC transporter/signal transduction system periplasmic domain-containing protein [Streptococcus pneumoniae AP200] gi|147756921|gb|EDK63961.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus pneumoniae SP11-BS70] gi|183578414|gb|EDT98942.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus pneumoniae MLV-016] gi|306408850|gb|ADM84277.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain protein [Streptococcus pneumoniae AP200] Length = 288 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 23/228 (10%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + A + +IKK G L+ + F V +G ++G+D++ L+ + K++Y Sbjct: 37 TAKARTIDEIKKSGELRIAVFGDKKLFGYVDNDGSYQGYDIELGNQLAQNL---GVKVKY 93 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKKGIS 138 + ++A R L S ++DI+ N T R ++ L + ++ G + K I+ Sbjct: 94 ISVDAANRAEYLISNKVDIILANFTVTDERKKQVDFALPYMKVSL----GVVSPKTGLIT 149 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP-IVFERVEEIDAAYRA---HRCDAY 194 V QL G ++ V GTT E YF+ K HP I ++ ++ +Y+A R DA+ Sbjct: 150 DVKQLEGKTLIVTKGTTAET----YFE----KNHPEIKLQKYDQYSDSYQALLDGRGDAF 201 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + D + + A L N V + + +A A+ +G+ E + ++ Sbjct: 202 STDNTEVLAWALEN--KGFEVGITSLGDPDTIAAAVQKGNQELLDFIN 247 >gi|169832728|ref|YP_001694168.1| amino acid ABC transporter periplasmic protein [Streptococcus pneumoniae Hungary19A-6] gi|168995230|gb|ACA35842.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus pneumoniae Hungary19A-6] Length = 288 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 57/228 (25%), Positives = 105/228 (46%), Gaps = 23/228 (10%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + A + +IKK G L+ + F V +G ++G+D++ L+ D K++Y Sbjct: 37 TAKARTIDEIKKSGELRIAVFGDKKPFGYVDNDGSYQGYDIELGNQLAQ---DLGVKVKY 93 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKKGIS 138 + ++A R L S ++DI N T R ++ L + ++ G + K I+ Sbjct: 94 ISVDAANRAEYLISNKVDITLANFTVTDERKKQVDFALPYMKVSL----GVVSPKTGLIT 149 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP-IVFERVEEIDAAYRA---HRCDAY 194 V QL G ++ V GTT E YF+ K HP I ++ ++ +Y+A R DA+ Sbjct: 150 DVKQLEGKTLIVTKGTTAET----YFE----KNHPEIKLQKYDQYSDSYQALLDGRGDAF 201 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + D + + A L N V + + +A A+ +G+ E + ++ Sbjct: 202 STDNTEVLAWALEN--KGFEVGITSLGDPDTIAAAVQKGNQELLDFIN 247 >gi|322376967|ref|ZP_08051460.1| CjaA protein [Streptococcus sp. M334] gi|321282774|gb|EFX59781.1| CjaA protein [Streptococcus sp. M334] Length = 288 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 57/228 (25%), Positives = 106/228 (46%), Gaps = 23/228 (10%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + A + +IKK G L+ + F V +G ++G+D++ L+ D K++Y Sbjct: 37 TAKARTIDEIKKSGELRIAVFGDKKPFGYVDNDGSYQGYDIELGNQLAQ---DLGVKVKY 93 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKKGIS 138 + ++A R L S ++DI N T R ++ L + ++ G + K I+ Sbjct: 94 VSVDAANRAEYLISNKVDITLANFTVTDERKKQVDFALPYMKVSL----GVVSPKTGLIT 149 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP-IVFERVEEIDAAYRA---HRCDAY 194 V QL G ++ V GTT E YF+ K HP I ++ ++ +Y+A R DA+ Sbjct: 150 DVKQLEGKTLIVTKGTTAET----YFE----KKHPEIKLQKYDQYSDSYQALLDGRGDAF 201 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + D + + A L N V + + + +A A+ +G+ E + ++ Sbjct: 202 STDNTEVLAWALEN--KGFEVGITSLGNPDTIAAAVQKGNQELLDFIN 247 >gi|312958337|ref|ZP_07772858.1| extracellular solute-binding protein [Pseudomonas fluorescens WH6] gi|311287401|gb|EFQ65961.1| extracellular solute-binding protein [Pseudomonas fluorescens WH6] Length = 282 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 59/222 (26%), Positives = 98/222 (44%), Gaps = 19/222 (8%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S + IK R L G+ T F V G + GFD D R + + D +K++++ + Sbjct: 31 SYIDKIKARDKLIVGVFTDKPPFGFVNEAGRYVGFDTDIGRQFAKDLLGDENKVEFVAVE 90 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 R LQS ++D++ N T R+ ++ P Q + + + S++ L+ Sbjct: 91 PASRIPFLQSDKVDLILANMTVTPERKEAVDFT-NPNLKVAVQALVPN-NSAVKSLNDLA 148 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHP----IVFERVEEIDAAYRAHRCDAYTGDISA 200 + V GTT ++ L K HP + FE+ E A A R DAY D Sbjct: 149 TRTTIVTTGTTADIWLT--------KNHPDWKLLKFEKNSESLQALSAGRGDAYAQDNLV 200 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE---WYN 239 L++ N P V+ + ++P+APA+ +G+ E W N Sbjct: 201 LFSWAKQN--PGYRVLEEKLGDEAPIAPAVKKGNIELRDWVN 240 >gi|225856389|ref|YP_002737900.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain protein [Streptococcus pneumoniae P1031] gi|225726288|gb|ACO22140.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain protein [Streptococcus pneumoniae P1031] Length = 288 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 57/228 (25%), Positives = 105/228 (46%), Gaps = 23/228 (10%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + A + +IKK G L+ + F V +G ++G+D++ L+ D K++Y Sbjct: 37 TAKARTIDEIKKSGELRIAVFGDKKPFGYVDNDGSYQGYDIELGNQLAQ---DLGVKVKY 93 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKKGIS 138 + ++A R L S ++DI N T R ++ L + ++ G + K I+ Sbjct: 94 ISVDAANRAEYLISNKVDITLANFTVTDERKKQVDFALPYMKVSL----GVVSPKTGLIT 149 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP-IVFERVEEIDAAYRA---HRCDAY 194 V QL G ++ V GTT E YF+ K HP I ++ ++ +Y+A R DA+ Sbjct: 150 DVKQLEGKTLIVTKGTTAET----YFE----KNHPEIKLQKYDQYSDSYQALLDGRGDAF 201 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + D + + A L N V + + +A A+ +G+ E + ++ Sbjct: 202 STDNTEVLAWALEN--KGFEVGITSLGDPDTIAAAVQKGNQELLDFIN 247 >gi|167836674|ref|ZP_02463557.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia thailandensis MSMB43] Length = 271 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 70/225 (31%), Positives = 102/225 (45%), Gaps = 23/225 (10%) Query: 27 LGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 L DIKK G L+ + GF + K N G DVD+ +AL+ + +++ P N Sbjct: 27 LDDIKKSGVLRVATFDSNPPFGFVDRKTN-RIVGLDVDYAQALADRL---GVRLKLQPTN 82 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF-DGQGFIMHKKKGISSVSQL 143 R L S ++D++ N +T+ E + + F I YF GQ F + KK + S QL Sbjct: 83 PANRIPFLTSGKVDLVLAN--FTITDERAKQIDFS-IPYFASGQQF-LAKKGVLKSADQL 138 Query: 144 SGASICVQAGTTTELTLADYF-KAHNMKYH--PIVFERVEEIDAAYRAHRCDAYTGDISA 200 +G I GTT E+TL + F KA + Y P F AA RA A T D Sbjct: 139 NGLRIGADKGTTNEVTLREKFPKATIVAYDDTPFAF-------AALRAGNVQAITQDGPK 191 Query: 201 LYALKLTNDRPSEHVILPDI-ISKSPLAPAIIQGDTEWYNIVSWT 244 L L L N ++ +P IS + + +G+T V+ T Sbjct: 192 LIGL-LANVPDKQNYEVPAFSISNDYMGVGVPKGETRLVAFVNDT 235 >gi|148989071|ref|ZP_01820471.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus pneumoniae SP6-BS73] gi|149010672|ref|ZP_01832043.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus pneumoniae SP19-BS75] gi|147765153|gb|EDK72082.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus pneumoniae SP19-BS75] gi|147925568|gb|EDK76645.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus pneumoniae SP6-BS73] Length = 286 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 57/228 (25%), Positives = 105/228 (46%), Gaps = 23/228 (10%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + A + +IKK G L+ + F V +G ++G+D++ L+ D K++Y Sbjct: 37 TAKARTIDEIKKSGELRIAVFGDKKPFGYVDNDGSYQGYDIELGNQLAQ---DLGVKVKY 93 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKKGIS 138 + ++A R L S ++DI N T R ++ L + ++ G + K I+ Sbjct: 94 ISVDAANRAEYLISNKVDITLANFTVTDERKKQVDFALPYMKVSL----GVVSPKTGLIT 149 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP-IVFERVEEIDAAYRA---HRCDAY 194 V QL G ++ V GTT E YF+ K HP I ++ ++ +Y+A R DA+ Sbjct: 150 DVKQLEGKTLIVTKGTTAET----YFE----KNHPEIKLQKYDQYSDSYQALLDGRGDAF 201 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + D + + A L N V + + +A A+ +G+ E + ++ Sbjct: 202 STDNTEVLAWALEN--KGFEVGITSLGDPDTIAAAVQKGNQELLDFIN 247 >gi|317123707|ref|YP_004097819.1| amino acid ABC transporter substrate-binding protein, PAAT family [Intrasporangium calvum DSM 43043] gi|315587795|gb|ADU47092.1| amino acid ABC transporter substrate-binding protein, PAAT family [Intrasporangium calvum DSM 43043] Length = 334 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 51/189 (26%), Positives = 87/189 (46%), Gaps = 30/189 (15%) Query: 30 IKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 I +RG L G+ +T L G + N +GFD+D RA++ ++ SK+++ + A + Sbjct: 86 ILERGHLTVGVSADTYLFGARDPFTN-RIEGFDIDIARAVAQSLLGSASKVRFRVITAAD 144 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG----ISSVSQL 143 R L+ +++D+++RN T R +AF Y GQ ++ K +++ L Sbjct: 145 RIEVLEKREVDMVARNMTMTCARWEQ--IAFSSEYYHSGQKLLVAKDPSGAVPDTTIEDL 202 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA--------YRAHRCDAYT 195 G +C GT+T K ++K VE + AA ++ R DA T Sbjct: 203 KGKRVCAPRGTST------LEKLRSVK-------GVEAVPAADHTGCLVLFQQGRADAIT 249 Query: 196 GDISALYAL 204 GD + L L Sbjct: 250 GDDTVLAGL 258 >gi|319404432|emb|CBI78035.1| amino-acid ABC transporter binding protein [Bartonella rochalimae ATCC BAA-1498] Length = 301 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 59/238 (24%), Positives = 98/238 (41%), Gaps = 22/238 (9%) Query: 1 MYKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K F + I + + L + +TN + L IK+ G + G+ G A NG + GF Sbjct: 1 MRKSFVIFIAAIFMGLTNIAHATNDT-LEKIKRTGEITLGVRES-SGLAYALGNGKYTGF 58 Query: 60 DVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 + + + I P K+ Y P+ ++ R L++ D +T R Sbjct: 59 HTEMAERIINDISKKIGQPIKVNYQPITSQNRIPLLKNGTYDFECGSTTNDSARNKEAAF 118 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASI-------CVQAGTTTELTLADYFKAHNM 169 A+ TY + ++ K GI S+ L+G + VQ + +F+ N Sbjct: 119 AY--TTYVESVKIVVKKNSGIQSIDDLNGKKVATTTGTTAVQLIRKNKRQKNIHFEVVNG 176 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 K H F +E + R DA+ D S L A + PS+++IL +S P+A Sbjct: 177 KDHGDSFLSLE-------SGRADAFVMDTSILSAHIAKSKNPSDYIILDTTLSVEPIA 227 >gi|91780195|ref|YP_555402.1| polar amino acid ABC transporter periplasmic ligand-binding protein [Burkholderia xenovorans LB400] gi|91692855|gb|ABE36052.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia xenovorans LB400] Length = 272 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 64/239 (26%), Positives = 99/239 (41%), Gaps = 13/239 (5%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCR 65 S + +L S +A L DIKK G L+ + GF + K N G DVD+ R Sbjct: 7 SAAVVGLLLTLSGVAHADRLDDIKKAGVLRVATFDSNPPFGFVDPKTN-QIVGLDVDYAR 65 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 A+++ + K++ P N R L+S ++D++ N +T+ E + F + Sbjct: 66 AVAAKLG---VKLEIQPTNPANRIAFLKSNKVDLVFAN--FTITDERKKEIDFSTPYFAS 120 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 G FI KK + S QL I GTT E + F A + + ++ AA Sbjct: 121 GTQFIA-KKGVLKSPQQLDSLRIGADKGTTNEQQVRAQFPAATI----VAYDDTPFAFAA 175 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 RA A T D L AL ++ I P IS + + + N+V+ T Sbjct: 176 LRAGNVQAITQDGPKLVALLANVPDKEKYEIPPFTISNDYEGVGVPKNEARLLNVVNET 234 >gi|325957194|ref|YP_004292606.1| amino acid ABC transporter periplasmic protein [Lactobacillus acidophilus 30SC] gi|325333759|gb|ADZ07667.1| amino acid ABC transporter periplasmic protein [Lactobacillus acidophilus 30SC] Length = 286 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 63/237 (26%), Positives = 106/237 (44%), Gaps = 18/237 (7%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 + +S N S+ IK+RG+++ G+ L + V + G GFD+ R L+ + P Sbjct: 39 SGWSNNNSVT-QIKRRGYIRIGVYGDLPPYGWVNSQGKRVGFDLRLARELAKELGVKP-- 95 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++ LN R AL S ++D++ N T R + A + G + K I Sbjct: 96 -RFTQLNGNNRVDALNSNKVDMVLANFTKTPERAEVVDFAHPYMKV--STGVVSPKSHPI 152 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 +S QL G + + G+T E +YF A+ + F+ + A + R A D Sbjct: 153 TSEKQLRGKQLILLKGSTGE----NYF-ANRPGIKLLRFDSETQQFNAMKNKRGAALADD 207 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM--VTAE 252 S LYA N P V + I +APA+ +G+ +++ WT+ + +TAE Sbjct: 208 NSYLYAWIKKN--PQYVVGIRSIGPHQFIAPAVKKGNK---SLLKWTNKQINRLTAE 259 >gi|319408772|emb|CBI82429.1| amino-acid ABC transporter binding protein [Bartonella schoenbuchensis R1] Length = 302 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 56/234 (23%), Positives = 95/234 (40%), Gaps = 13/234 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++I + L IK G + G+ +G A NG + GF Sbjct: 1 MKKSLLAFSAAIVIGLTSMVQAQNDTLEKIKTTGEITLGVRESSIGLAYAIGNGKYTGFH 60 Query: 61 VDFCRALSSAIFDDPSK-------IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 + ++ I DD SK I YLP+ ++ R LQ+ D +T R Sbjct: 61 TE----MAEYIIDDISKKIGQSIKIHYLPITSQNRIPLLQNGTYDFECGSTTNDSSRNKE 116 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 A+ TY + + K GI S+ L+G ++ GTT+ + +A N+ + Sbjct: 117 AAFAY--TTYVEEVRIAVKKNSGIKSIEDLNGKTVATTTGTTSVQLIRKNKRAKNINFKV 174 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 + + + + R DA+ D S L + PS+++IL ++S P+A Sbjct: 175 VTGKDHGDSFLLLESGRADAFVMDASILSGHISKSKNPSDYIILDTVLSIEPIA 228 >gi|307706279|ref|ZP_07643092.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus mitis SK321] gi|307618312|gb|EFN97466.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus mitis SK321] Length = 288 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 57/228 (25%), Positives = 105/228 (46%), Gaps = 23/228 (10%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + A + +IKK G L+ + F V +G ++G+D++ L+ D K++Y Sbjct: 37 TAKARTIDEIKKSGELRIAVFGDKKPFGYVDNDGSYQGYDIELGNQLAQ---DLGVKVKY 93 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKKGIS 138 + ++A R L S ++DI N T R ++ L + ++ G + K I+ Sbjct: 94 VSVDAANRAEYLISNKVDITLANFTVTDERKKQVDFALPYMKVSL----GVVSPKTGLIT 149 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP-IVFERVEEIDAAYRA---HRCDAY 194 V QL G ++ V GTT E YF+ K HP I ++ ++ +Y+A R DA+ Sbjct: 150 DVKQLEGKTLIVTKGTTAET----YFE----KNHPEIKLQKYDQYSDSYQALLDGRGDAF 201 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + D + + A L N V + + +A A+ +G+ E + ++ Sbjct: 202 STDNTEVLAWALEN--KGFEVGITSLGDPDTIAAAVQKGNQELLDFIN 247 >gi|296532448|ref|ZP_06895172.1| ABC superfamily ATP binding cassette transporter, binding protein [Roseomonas cervicalis ATCC 49957] gi|296267223|gb|EFH13124.1| ABC superfamily ATP binding cassette transporter, binding protein [Roseomonas cervicalis ATCC 49957] Length = 299 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 55/224 (24%), Positives = 94/224 (41%), Gaps = 7/224 (3%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 S S L IK RG L G + + A+G +G D+D R L+ ++FDDP+K+++ Sbjct: 42 SAGRSRLQMIKDRGRLIVGTGSTNPPWHFEGADGKLQGMDIDLARLLAKSLFDDPNKVEF 101 Query: 81 LPLNAKERFLALQSKQIDILSRNTDW-TLLREISLGLAFRPITYFDGQGFIMHKKKG-IS 138 + + R +L + ++DI+ W T+ + + F Y +G ++ + Sbjct: 102 VLQGSDARIPSLITDKVDIV---VQWMTVTPGRAQQVEFTIPYYREGVTLLLLARGAKYQ 158 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + + A V G + + ++ + + FE + + A A R DAY D Sbjct: 159 NYDAMKAAGNAVTVGGMQNVFMEEWVRKALPQAKVDAFESPDAVLQALNARRIDAYMADQ 218 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 SA A L P V + A A+ GD W N V+ Sbjct: 219 SA--ARWLMQQTPGRFVDAGYGWMPNSYASAVKPGDPVWLNWVN 260 >gi|307704540|ref|ZP_07641447.1| ABC transporter substrate-binding protein [Streptococcus mitis SK597] gi|307621905|gb|EFO00935.1| ABC transporter substrate-binding protein [Streptococcus mitis SK597] Length = 288 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 57/228 (25%), Positives = 105/228 (46%), Gaps = 23/228 (10%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + A + +IKK G L+ + F V +G ++G+D++ L+ D K++Y Sbjct: 37 TAKARTIDEIKKSGELRIAVFGDKKPFGYVDNDGSYQGYDIELGNQLAQ---DLGVKVKY 93 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKKGIS 138 + ++A R L S ++DI N T R ++ L + ++ G + K I+ Sbjct: 94 VSVDAANRAEYLISNKVDITLANFTVTDERKKQVDFALPYMKVSL----GVVSPKTGLIT 149 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP-IVFERVEEIDAAYRA---HRCDAY 194 V QL G ++ V GTT E YF+ K HP I ++ ++ +Y+A R DA+ Sbjct: 150 DVKQLEGKTLIVTKGTTAET----YFE----KNHPEIKLQKYDQYSDSYQALLDGRGDAF 201 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + D + + A L N V + + +A A+ +G+ E + ++ Sbjct: 202 STDNTEVLAWALEN--KGFEVGITSLGDPDTIAAAVQKGNQELLDFIN 247 >gi|168492230|ref|ZP_02716373.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus pneumoniae CDC0288-04] gi|183573551|gb|EDT94079.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus pneumoniae CDC0288-04] Length = 288 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 56/228 (24%), Positives = 105/228 (46%), Gaps = 23/228 (10%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + A + +IKK G L+ + F V +G ++G+D++ L+ + K++Y Sbjct: 37 TAKARTIDEIKKSGELRIAVFGDKKPFGYVDNDGSYQGYDIELGNQLAQNL---GVKVKY 93 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKKGIS 138 + ++A R L S ++DI N T R ++ L + ++ G + K I+ Sbjct: 94 ISVDAANRAEYLISNKVDITLANFTVTDERKKQVDFALPYMKVSL----GVVSPKTGLIT 149 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP-IVFERVEEIDAAYRA---HRCDAY 194 V QL G ++ V GTT E YF+ K HP I ++ ++ +Y+A R DA+ Sbjct: 150 DVKQLEGKTLIVTKGTTAET----YFE----KNHPEIKLQKYDQYSDSYQALLDGRGDAF 201 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + D + + A L N V + + +A A+ +G+ E + ++ Sbjct: 202 STDNTEVLAWALEN--KGFEVGITSLGDPDTIAAAVQKGNQELLDFIN 247 >gi|116248747|ref|YP_764588.1| putative substrate-binding component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115253397|emb|CAK11785.1| putative substrate-binding component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 279 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 63/274 (22%), Positives = 114/274 (41%), Gaps = 17/274 (6%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V L + L T S L ++ RG L G + + A+ +GFDVD Sbjct: 9 VMSLAVAALLSTPALAEGSKLDEVLARGHLVLGTGSTNAPWHFKSADDKLQGFDVDMGHI 68 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 ++ A+F DP KI+Y+ ++ R + + ++DI + T+ E + +AF Y +G Sbjct: 69 IAKALFGDPEKIEYVNQSSDARIPNITTDKVDITCQFM--TVTGERAQQVAFTIPYYREG 126 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA-- 184 G ++ + + L AG++ +++ A M + + V++ D+ Sbjct: 127 VGLMLKADGKYADYAALKA------AGSSVTISVLQNVYAEAMVHAALPEATVDQYDSVD 180 Query: 185 ----AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A + R DA D S+L A +T + P + + A A+ +GD +W N Sbjct: 181 LIYQALESGRADAVATDQSSL-AWYMTQN-PGRYKDAGYGWNPQTYACAVKRGDQDWLNF 238 Query: 241 VSWTHYAMVTAEELGITQKNINQ-VSKDTTNPDV 273 V+ + +T E K+ KD P + Sbjct: 239 VNTALHEAMTGVEFDFYAKSFKTWFGKDLAPPQI 272 >gi|319899106|ref|YP_004159199.1| amino-acid ABC transporter binding protein [Bartonella clarridgeiae 73] gi|319403070|emb|CBI76625.1| amino-acid ABC transporter binding protein [Bartonella clarridgeiae 73] Length = 301 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 65/253 (25%), Positives = 106/253 (41%), Gaps = 32/253 (12%) Query: 8 SILCLIILFFTSFSTNASILGD----IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 S+L I++ ++ A D IKK G + G+ G A NG + GF + Sbjct: 4 SLLIFIVVISMGLTSIAHATNDTLEKIKKTGEITLGVRES-SGLAYALGNGKYTGFHTE- 61 Query: 64 CRALSSAIFDD-------PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 ++ I DD P K+ YLP+ ++ R L++ D +T R S Sbjct: 62 ---MAERIIDDISKKIGKPIKVNYLPITSQNRIPLLKNGTYDFECGSTTNDSAR--SKEA 116 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD-------YFKAHNM 169 AF TY + ++ K GI S+ L+G ++ GTT + +FK N Sbjct: 117 AFAYTTYVESVKIVVKKNSGIKSIDDLNGKTVATTTGTTAVQLIRKNKRQKNIHFKVVNG 176 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 K H F +E + R DA+ D S L A + PS+++IL +S P+A Sbjct: 177 KDHGDSFLLLE-------SGRADAFVMDTSILSANIAKSKNPSDYIILDTTLSVEPIACM 229 Query: 230 IIQGDTEWYNIVS 242 + D + +++ Sbjct: 230 LRLNDKNFEQVIN 242 >gi|73540829|ref|YP_295349.1| extracellular solute-binding protein [Ralstonia eutropha JMP134] gi|72118242|gb|AAZ60505.1| extracellular solute-binding protein, family 3 [Ralstonia eutropha JMP134] Length = 297 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 56/208 (26%), Positives = 88/208 (42%), Gaps = 14/208 (6%) Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDD-------PS-KIQYLPLNAKERFLALQSKQ 96 V F+ + A GF VD L+ AI DD P+ K+ Y+P+ + R L S Sbjct: 46 VPFSYLLAPHKAVGFSVD----LTEAIIDDVRSRLKKPNLKVDYVPVTGQNRIPMLVSGT 101 Query: 97 IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT 156 D+ +T T R +AF ++ G + K GI + S L+ ++ AG+T Sbjct: 102 YDLECGSTTNTSAR--GKEVAFSINVFYAGTRLLTKKNSGIKNYSDLTKKTVASTAGSTN 159 Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216 E L+ Y HN+ I + + R A D L+ L+ + PS I Sbjct: 160 EKLLSQYSADHNLDIQLISGKDYADAMQLVLNDRAVALALDDVLLFGLRANSRSPSALEI 219 Query: 217 LPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + D + P A + + DTE+ +V T Sbjct: 220 VGDTLQVEPYACMVRKDDTEFKKLVDGT 247 >gi|330900314|gb|EGH31733.1| extracellular solute-binding protein [Pseudomonas syringae pv. japonica str. M301072PT] Length = 264 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 57/246 (23%), Positives = 103/246 (41%), Gaps = 17/246 (6%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 +L T + S L + KRG L G + + A+G +GFD+D R ++ +F+ Sbjct: 1 MLANTVQAAEGSKLDAVSKRGNLVVGTGSTNAPWHFQGADGKLQGFDIDIGRIIAKGLFN 60 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 DPSK++++ ++ R L + ++DI + T R + +AF Y +G ++ Sbjct: 61 DPSKVEFVVQSSDARIPNLLTDKVDISCQFITVTASR--AQQVAFTLPYYREGVALLLPA 118 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA------AYR 187 + L AG + + A + + + +V++ D+ A Sbjct: 119 NSKYKEIDDLKA------AGDDVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLMYQAIN 172 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT-HY 246 + R D D S++ L + N P + S A A+ +GD +W N V+ H Sbjct: 173 SGRADTAATDQSSVKYLMVQN--PGRYRSPAFAWSPQTYACAVKRGDQDWLNFVNTALHE 230 Query: 247 AMVTAE 252 AM E Sbjct: 231 AMTGVE 236 >gi|111223300|ref|YP_714094.1| putative ABC transporter glutamine-binding protein GlnH [Frankia alni ACN14a] gi|111150832|emb|CAJ62536.1| putative ABC transporter glutamine-binding protein GlnH [Frankia alni ACN14a] Length = 350 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 13/154 (8%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + L I++RG+L+ + + F + A G ++GFDVD + AIF +++ Sbjct: 103 TFLATIQQRGYLRAAVLADVPPFGSINAFTGQFEGFDVDLANRIGRAIFGTDGHVRFRAT 162 Query: 84 NAKERFLALQSKQIDIL--SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 ER L +DI+ + T+ R+I F + +++ Q ++ S+ Sbjct: 163 TYAERIPVLTHGDVDIVVATMTTNCERRRQID----FSTVYWYETQRVLVPLGSPARSLD 218 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 L G +C AGTTT TL HP+V Sbjct: 219 DLGGQPVCTAAGTTTVDTL------RRTSSHPVV 246 >gi|119713445|gb|ABL97506.1| extracellular solute-binding protein family 3 [uncultured marine bacterium HOT0_02H05] Length = 299 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 51/226 (22%), Positives = 101/226 (44%), Gaps = 12/226 (5%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPSKIQY 80 IL I++ G + G FA + G+W G+ +D + + P +++ Sbjct: 25 GEILERIRQTGVITAGTRKDATPFAYINEKGEWVGYSIDILEIIRQNVEKELGKPIRLKL 84 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISS 139 + + + RF +++K+IDI ++ +T R+ + + ++YF IM KK + + Sbjct: 85 VEVTPQNRFNKVKNKEIDIECASSTFTWERDKIIDFS---VSYFASGTKIMRKKGSSLGT 141 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L+G I V TT E + A + PI R+E ++ + +A GD Sbjct: 142 IDSLAGRRIGVIPNTTNEQAIKIQQPAAII--VPIK-NRIEGLEKLKKGE-IEAIAGDGI 197 Query: 200 ALYALKLTNDRPSEHVILPDI-ISKSPLAPAIIQGDTEWYNIVSWT 244 L AL+L N+ ++P+ A I + ++ W +V+++ Sbjct: 198 VLQALQLENNNGDRFEVVPEFPYVYEAYACMIPEDESAWRGMVNYS 243 >gi|284048142|ref|YP_003398481.1| extracellular solute-binding protein family 3 [Acidaminococcus fermentans DSM 20731] gi|283952363|gb|ADB47166.1| extracellular solute-binding protein family 3 [Acidaminococcus fermentans DSM 20731] Length = 292 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 6/143 (4%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 S A + IKKRG L+ G+ GF + A G + G +VD AL+ + D ++ Sbjct: 40 SNVAEDIAAIKKRGVLRVGVKNSTKGFGYQDPATGKFTGLEVDLGEALAKKLGVD---VE 96 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 Y P+ A R L S ID+++ +T+ E F Y D G ++ K I+S Sbjct: 97 YTPVTAATRTALLDSGDIDMVAAT--FTITPERKKSWDFTTPYYTDHVGVLVEKASNINS 154 Query: 140 VSQLSGASICVQAGTTTELTLAD 162 ++ L G + V +G+T+ L + Sbjct: 155 LADLKGKVVGVSSGSTSAKALVE 177 >gi|260103307|ref|ZP_05753544.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus helveticus DSM 20075] gi|260082888|gb|EEW67008.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus helveticus DSM 20075] Length = 286 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 61/233 (26%), Positives = 104/233 (44%), Gaps = 17/233 (7%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 +N + + IK+RG+++ G+ L + V + G GFD+ R L+ + P ++ Sbjct: 42 SNNNSVTQIKRRGYIRIGVYGDLPPYGWVNSQGKRVGFDLRLARELAKELGVKP---RFT 98 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 LN R AL S ++D++ N T R + A + G + K I+S Sbjct: 99 QLNGNNRVDALNSNKVDMVLANFTKTPERAEVVDFAHPYMKV--STGVVSPKSHPITSEK 156 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 QL G + + G+T E +YF A+ + F+ + A + R A D S L Sbjct: 157 QLRGKQLILLKGSTGE----NYF-ANRPGIKLLRFDSETQQFNAMKNKRGAALADDNSYL 211 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM--VTAE 252 YA N P V + I +APA+ +G+ +++ WT+ + +TAE Sbjct: 212 YAWIKKN--PQYVVGIRSIGPHQFIAPAVKKGNK---SLLKWTNKQIDRLTAE 259 >gi|149926670|ref|ZP_01914930.1| putative ABC transporter, glutamate receptor [Limnobacter sp. MED105] gi|149824599|gb|EDM83815.1| putative ABC transporter, glutamate receptor [Limnobacter sp. MED105] Length = 299 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 51/231 (22%), Positives = 94/231 (40%), Gaps = 6/231 (2%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQYLP 82 L I + + G V F+ + N G+ +D C + A+ PS +Q P Sbjct: 30 LKKITETKTIVVGYRESSVPFSYLDNNQKPIGYHMDMCNKVVDAVKAKLKMPSLNVQLQP 89 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + + R LQ+ ID+ +T ++ R+ + A T+ ++ K GI S++ Sbjct: 90 VTSANRIPLLQNGTIDMECGSTTNSVARQEQVSFANS--TFITSVKIVVKKNSGIKSLAD 147 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G I +GTT+ + K N+ + I + E R A+ D + Sbjct: 148 LDGQPIATTSGTTSVQLIKQNEKGANINFKEIYGKDHAESFLLVANDRAKAFVMDDILIA 207 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 L + P E + LP+I+ P + + D ++ ++ T M+ + E Sbjct: 208 GLVAQSKNPDEFMFLPEILRTEPYGIMLRKDDPQFKALLDETVNGMIKSGE 258 >gi|67923258|ref|ZP_00516743.1| extracellular solute-binding protein, family 3 [Crocosphaera watsonii WH 8501] gi|67854884|gb|EAM50158.1| extracellular solute-binding protein, family 3 [Crocosphaera watsonii WH 8501] Length = 300 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 51/226 (22%), Positives = 101/226 (44%), Gaps = 12/226 (5%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPSKIQY 80 IL I++ G + G FA + G+W G+ +D + + P +++ Sbjct: 26 GEILERIRQTGVITAGTRKDATPFAYINEKGEWVGYSIDILEIIRQNVEKELGKPIRLKL 85 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISS 139 + + + RF +++K+IDI ++ +T R+ + + ++YF IM KK + + Sbjct: 86 VEVTPQNRFNKVKNKEIDIECASSTFTWERDKIIDFS---VSYFASGTKIMRKKGSSLGT 142 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L+G I V TT E + A + PI R+E ++ + +A GD Sbjct: 143 IDSLAGRRIGVIPNTTNEQAIKIQQPAAII--VPIK-NRIEGLEKLKKGE-IEAIAGDGI 198 Query: 200 ALYALKLTNDRPSEHVILPDI-ISKSPLAPAIIQGDTEWYNIVSWT 244 L AL+L N+ ++P+ A I + ++ W +V+++ Sbjct: 199 VLQALQLENNNGDRFEVVPEFPYVYEAYACMIPEDESAWRGMVNYS 244 >gi|296162377|ref|ZP_06845170.1| extracellular solute-binding protein family 3 [Burkholderia sp. Ch1-1] gi|295887410|gb|EFG67235.1| extracellular solute-binding protein family 3 [Burkholderia sp. Ch1-1] Length = 273 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 51/207 (24%), Positives = 84/207 (40%), Gaps = 17/207 (8%) Query: 9 ILCLIILFFTSFSTNASI--LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 +L L +L F S A L +K RG L GI V F + + G GF+VD Sbjct: 9 VLMLFVLGFGGLSGGARADELEMVKARGKLIVGIRNDYVPFGYLDSKGQLVGFEVDLASF 68 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI----LSRNTDWTLLREISLGLAFRPIT 122 ++ +F + I+++P+ A R L + +ID+ L +N D + + + P Sbjct: 69 VAKDLFGSETAIEFVPVVASNRIELLNAGRIDVIFATLGKNPDRAKVIDFT-----NPYY 123 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 G + K I+ L G +C G L + A ++F + Sbjct: 124 MMAGMVLLAPKNTTIAKWEDLKGRKVCGSQGNMYNRALQEKLGADT-----VLFTATAPM 178 Query: 183 DAAYRAHRCDAYTGDISALYALKLTND 209 A++ +RC+A D L LK+ D Sbjct: 179 YKAFQDNRCEAIAYDGPNL-TLKVNED 204 >gi|86360898|ref|YP_472785.1| amino acid ABC transporter substrate-binding protein [Rhizobium etli CFN 42] gi|86285000|gb|ABC94058.1| probable amino acid ABC transporter, substrate-binding protein [Rhizobium etli CFN 42] Length = 279 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 60/258 (23%), Positives = 112/258 (43%), Gaps = 17/258 (6%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 + S L ++ RG L G + + A+ +GFDVD ++ A+F DP KI+Y+ Sbjct: 25 DGSKLDEVLARGHLVLGTGSTNAPWHFKSADDKLQGFDVDMGHIVAKALFGDPDKIEYVN 84 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 ++ R + + ++DI + T+ E + +AF Y +G G ++ + + Sbjct: 85 QSSDARIPNITTDKVDITCQFM--TVTGERAQQVAFTIPYYREGVGLMLKGDGKYADYAA 142 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPI---VFERVEEIDAAYRA---HRCDAYTG 196 L AG++ +++ A +M + + ++ E +D Y+A R DA Sbjct: 143 LKA------AGSSVTISVLQNVYAESMVHAALPEATVDQYESVDLIYQALESGRADAAAT 196 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 D S+L A +T + P + + A A+ +GD +W N V+ + +T E Sbjct: 197 DQSSL-AWYMTQN-PGRYKDAGYGWNPQTYACAVKRGDQDWLNFVNTALHEAMTGVEFDF 254 Query: 257 TQKNINQ-VSKDTTNPDV 273 K+ KD P + Sbjct: 255 YAKSFKTWFGKDLAPPQI 272 >gi|227892707|ref|ZP_04010512.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus ultunensis DSM 16047] gi|227865484|gb|EEJ72905.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus ultunensis DSM 16047] gi|323466211|gb|ADX69898.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus helveticus H10] Length = 286 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 61/233 (26%), Positives = 104/233 (44%), Gaps = 17/233 (7%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 +N + + IK+RG+++ G+ L + V + G GFD+ R L+ + P ++ Sbjct: 42 SNNNSVTQIKRRGYIRIGVYGDLPPYGWVNSQGKRVGFDLRLARELAKELGVKP---RFT 98 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 LN R AL S ++D++ N T R + A + G + K I+S Sbjct: 99 QLNGNNRVDALNSNKVDMVLANFTKTPERAEVVDFAHPYMKV--STGVVSPKSHPITSEK 156 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 QL G + + G+T E +YF A+ + F+ + A + R A D S L Sbjct: 157 QLRGKQLILLKGSTGE----NYF-ANRPGIKLLRFDSETQQFNAMKNKRGAALADDNSYL 211 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM--VTAE 252 YA N P V + I +APA+ +G+ +++ WT+ + +TAE Sbjct: 212 YAWIKKN--PQYVVGIRSIGPHQFIAPAVKKGNK---SLLKWTNKQIDRLTAE 259 >gi|46200782|ref|ZP_00056492.2| COG0834: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Magnetospirillum magnetotacticum MS-1] Length = 294 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 53/240 (22%), Positives = 102/240 (42%), Gaps = 20/240 (8%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS----KIQYLP 82 L +K+ G + G+ + + G G+ VD CR ++ A+ +++ Sbjct: 19 LDKVKRTGSIVLGVRETSYPLSYLDQTGQPIGYHVDICRRIAEAVKTQLGLSSLEVRTEV 78 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + +K R + ID+ +T R+ + AF P TY + K I+ ++Q Sbjct: 79 VTSKTRIPKMVDGAIDLECGSTTNNAARQTQV--AFAPTTYVASVRIAVKKASRITKLAQ 136 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKY-------HPIVFERVEEIDAAYRAHRCDAYT 195 L G ++ AG+T+ L + ++ H F+ +E AA A+ Sbjct: 137 LDGKAVVTTAGSTSVQLLKARVQGRDINVIEVFGNDHAESFKMLESDQAA-------AFV 189 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D + L L ++ P ++ IL ++ P+A + + D + +V T AM+T+ E+G Sbjct: 190 MDDNLLAGLIASSSAPKDYEILAQTLNTEPIAIMLRKNDPAFKALVDQTVKAMMTSGEVG 249 >gi|170702190|ref|ZP_02893096.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] gi|170132899|gb|EDT01321.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] Length = 278 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 67/228 (29%), Positives = 101/228 (44%), Gaps = 21/228 (9%) Query: 23 NASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 +A L DIKK G L+ + G+ + K+N G DVD+ +AL+ + K+Q Sbjct: 30 HADRLDDIKKAGVLRVATFDSNPPFGYVDGKSN-HIVGLDVDYAKALADKL---GVKLQL 85 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 P N R L S ++D++ N +T+ E + + F I YF + KK + S Sbjct: 86 QPTNPANRIPFLTSGKVDLVLAN--FTITDERAKQVDFS-IPYFSSGQQFLAKKGVLKSA 142 Query: 141 SQLSGASICVQAGTTTELTLAD-YFKAHNMKYH--PIVFERVEEIDAAYRAHRCDAYTGD 197 QL+ + GTT E+TL + Y KA + Y P F AA RA A T D Sbjct: 143 DQLNSLRVGADKGTTNEITLREKYPKATIVAYDDTPFAF-------AALRAGNVQAITQD 195 Query: 198 ISALYALKLTNDRPSEHVILPDI-ISKSPLAPAIIQGDTEWYNIVSWT 244 L L L N ++ +P IS + + +G+T V+ T Sbjct: 196 GPKLIGL-LANVPDKQNYEIPAFTISNDYMGVGVPKGETRLLGFVNDT 242 >gi|319407433|emb|CBI81084.1| amino-acid ABC transporter binding protein [Bartonella sp. 1-1C] Length = 301 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 58/237 (24%), Positives = 93/237 (39%), Gaps = 20/237 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + I + + L IK+ G + G+ G A NG + GF Sbjct: 1 MRKSFLIFIAAIFMGSTNIAHATNDTLEKIKRTGEITLGVRES-SGLAYALGNGKYTGFH 59 Query: 61 VDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 + + + I P K+ Y P+ ++ R L++ D +T R S A Sbjct: 60 TEMAERIINDISKKIGQPIKVHYQPITSQNRIPLLKNGTYDFECGSTTNDSAR--SKEAA 117 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASI-------CVQAGTTTELTLADYFKAHNMK 170 F TY + ++ K GI S+ L+G + VQ + +F+ N K Sbjct: 118 FAYTTYVESVKIVVKKNSGIQSIDDLNGKKVATTTGTTAVQLIRKNKRQKNIHFEVVNGK 177 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 H F +E + R DA+ D S L A + PS+++IL +S P+A Sbjct: 178 DHGDSFLSLE-------SGRADAFVMDTSILSAHIAKSRNPSDYIILDTTLSVEPIA 227 >gi|158314294|ref|YP_001506802.1| extracellular solute-binding protein [Frankia sp. EAN1pec] gi|158109699|gb|ABW11896.1| extracellular solute-binding protein family 3 [Frankia sp. EAN1pec] Length = 338 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 44/166 (26%), Positives = 81/166 (48%), Gaps = 28/166 (16%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW-------KGFDVDFCRALSSAIF 72 F++ S L I+KRGFL+ G++ + + G W +GFDV+ + ++ A+F Sbjct: 71 FASGGS-LDKIRKRGFLRVGVSR------DTQTRGAWSPVSHRFEGFDVELAQRIAEALF 123 Query: 73 DDPS---KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 + K++Y P++ ER A+++ ++DIL ++ R +GL+ YF Sbjct: 124 GPGTADEKVRYRPVSYAERLPAVENGEVDILVSTLTYSESRAERVGLS---AAYFTAHPR 180 Query: 130 IMHKKK--------GISSVSQLSGASICVQAGTTTELTLADYFKAH 167 ++ ++ GI S +L+G +C GTTT L + + H Sbjct: 181 LLSHRESTHSGAGPGIDSPEELAGKRVCAPRGTTTLTNLENTHQTH 226 >gi|220929057|ref|YP_002505966.1| extracellular solute-binding protein family 3 [Clostridium cellulolyticum H10] gi|219999385|gb|ACL75986.1| extracellular solute-binding protein family 3 [Clostridium cellulolyticum H10] Length = 290 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 15/199 (7%) Query: 8 SILCLIILFFTSFSTNA-------SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 SI+C I L S A SIL + +RG + G + + NG+W GFD Sbjct: 4 SIVCFIFLVIISVLLTACGTEKQESILDKVLERGVVNIGSGNNVPPMNYIDENGNWTGFD 63 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ A++ + K++ + +N K R L + +D++ N T R+ + P Sbjct: 64 IELSDAIAERL---GVKLERVVVNNKTRISFLANGTVDMVVSNLSHTRSRDEQIDYVEPP 120 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYF-KAHNMKYHPIVFER 178 + G I + KKG +++ L+G I V G+ + + K + K F+ Sbjct: 121 YLW---TGKIAYAKKGKFKNLTDLAGKKIAVDQGSNAYIAIQQEIEKVNGAKPDIQTFQS 177 Query: 179 VEEIDAAYRAHRCDAYTGD 197 E A + + DA+T D Sbjct: 178 NAECFLALKQGKVDAFTQD 196 >gi|323467048|gb|ADX70735.1| Glutamine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus helveticus H10] Length = 272 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 60/243 (24%), Positives = 106/243 (43%), Gaps = 18/243 (7%) Query: 1 MYKDFFVSILCLIILFFT----SFSTNASILGDIKKRGFLKCGI--NTGLVGFAEVKANG 54 M K FF+S L + I FT S + ++ +K + G+ +T L G +K G Sbjct: 1 MKKRFFLSTLLIGITLFTLSACSQNKKQNVYQTVKSTKTINWGVKADTPLFGSMNIKT-G 59 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 GF++D +AL+ + +K ++ A + L+++ +D + T RE + Sbjct: 60 KINGFEIDLAKALTKEMLGKNAKANFVTTTANTKIQLLKNRNVDAVIAAMTITPEREKQV 119 Query: 115 GLAFRPITYFD-GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + +P YF GQ ++ K I +V L+ + V GTT AD K K Sbjct: 120 DFS-KP--YFPAGQSIMVAKNSKIKNVKDLNNKKVLVVKGTTA----ADAVKKFAPKAEI 172 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + F+ + AA +A + DA+ D L + + S + ++ + P A+ +G Sbjct: 173 LQFDDYGQAFAALKAGQGDAFVTDNGILVGILRDS---SGYKLVGGNFTNQPYGIAVNKG 229 Query: 234 DTE 236 TE Sbjct: 230 QTE 232 >gi|328554362|gb|AEB24854.1| glutamine ABC transporter (glutamine-binding lipoprotein) [Bacillus amyloliquefaciens TA208] gi|328912766|gb|AEB64362.1| glutamine ABC transporter (glutamine-binding lipoprotein) [Bacillus amyloliquefaciens LL3] Length = 275 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 53/219 (24%), Positives = 95/219 (43%), Gaps = 11/219 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSK 77 S T L IK R + G+ T F + ++GD +GFD+D + ++ I D K Sbjct: 33 SKGTGKDTLASIKDRDKIIFGVKTDTRLFGLKNPSSGDIEGFDIDIAKQIAKDILGDEKK 92 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++ + +K R LQ+ ID ++ T+ E + F + + GQ ++ K I Sbjct: 93 AEFKEVTSKTRIPMLQNGDIDAITAT--MTITDERKKEVDFSDVYFEAGQSLLVKKGSSI 150 Query: 138 SSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 S L G+ + G+T+ + + KA + + FE E A +A + DA T Sbjct: 151 KSTEDLKKGSKVLAVKGSTSSQNIRE--KAPDA--SVLEFENYAEAFTALKAGQGDALTT 206 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 D + LY + D ++ + + P A+ +G + Sbjct: 207 DNAILYGM---ADENKQYQLTGGTFTDEPYGIAVKKGQS 242 >gi|218678693|ref|ZP_03526590.1| putative substrate-binding component of ABC transporter [Rhizobium etli CIAT 894] Length = 277 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 63/257 (24%), Positives = 111/257 (43%), Gaps = 19/257 (7%) Query: 1 MYKDFFVSILCLII--LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M F ++ LI L T S L ++ RG L G + + A+ +G Sbjct: 1 MTISFRTGVMSLITAALLSTPALAEGSKLDEVLARGHLVLGTGSTNAPWHFKSADDKLQG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD ++ A+F DP KI+Y+ ++ R + + ++DI + T+ E + +AF Sbjct: 61 FDVDMGHIIAKALFGDPEKIEYVNQSSDARIPNITTDKVDITCQFM--TVTGERAQQVAF 118 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI---V 175 Y +G G ++ + + L AG++ +++ A M + + Sbjct: 119 TIPYYREGVGLMLKADGKYADYAALKA------AGSSVTISVLQNVYAETMVHAALPEAT 172 Query: 176 FERVEEIDAAYRA---HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 ++ E +D Y+A R DA D S+L A +T + P + + A A+ + Sbjct: 173 VDQYESVDLIYQALESGRADAVATDQSSL-AWYMTQN-PGRYKDAGYGWNPQTYACAVKR 230 Query: 233 GDTEWYNIVSWT-HYAM 248 GD +W N V+ H AM Sbjct: 231 GDQDWLNFVNTALHEAM 247 >gi|308174443|ref|YP_003921148.1| glutamine ABC transporter glutamine-binding lipoprotein [Bacillus amyloliquefaciens DSM 7] gi|307607307|emb|CBI43678.1| glutamine ABC transporter (glutamine-binding lipoprotein) [Bacillus amyloliquefaciens DSM 7] Length = 275 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 53/219 (24%), Positives = 95/219 (43%), Gaps = 11/219 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSK 77 S T L IK R + G+ T F + ++GD +GFD+D + ++ I D K Sbjct: 33 SKGTGKDTLASIKDRDKIIFGVKTDTRLFGLKNPSSGDIEGFDIDIAKQIAKDILGDEKK 92 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++ + +K R LQ+ ID ++ T+ E + F + + GQ ++ K I Sbjct: 93 AEFKEVTSKTRIPMLQNGDIDAITAT--MTITDERKKEVDFSDVYFEAGQSLLVKKGSSI 150 Query: 138 SSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 S L G+ + G+T+ + + KA + + FE E A +A + DA T Sbjct: 151 KSTEDLKKGSKVLAVKGSTSSQNIRE--KAPDA--SVLEFENYAEAFTALKAGQGDALTT 206 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 D + LY + D ++ + + P A+ +G + Sbjct: 207 DNAILYGM---ADENKQYQLTGGTFTDEPYGIAVKKGQS 242 >gi|29828504|ref|NP_823138.1| glutamate binding periplasmic protein [Streptomyces avermitilis MA-4680] gi|29605607|dbj|BAC69673.1| putative glutamate ABC transporter substrate-binding protein [Streptomyces avermitilis MA-4680] Length = 305 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 42/144 (29%), Positives = 70/144 (48%), Gaps = 5/144 (3%) Query: 31 KKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 KKRG+L G+ E A+G + GFD++ + +S+++ DP I++ + + R Sbjct: 61 KKRGYLTVGVKEDQPYLGERDPASGAFSGFDIEIAKMMSASLGFDPGTIRFKTIASANRE 120 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASI 148 ALQ+ QID R+ +G A Y GQ ++ K ++GI+ L+G + Sbjct: 121 TALQNGQIDYYVGTYTINDKRKKLVGFAGP--YYLAGQSLLVRKDEQGINGPQDLAGKRV 178 Query: 149 CVQAGTTT-ELTLADYFKAHNMKY 171 C AG+T + DY K + Y Sbjct: 179 CSAAGSTPYQRIQQDYPKVKLVAY 202 >gi|56962545|ref|YP_174271.1| glutamine ABC transporter substrate-binding protein [Bacillus clausii KSM-K16] gi|56908783|dbj|BAD63310.1| glutamine ABC transporter substrate-binding protein [Bacillus clausii KSM-K16] Length = 273 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 52/223 (23%), Positives = 95/223 (42%), Gaps = 13/223 (5%) Query: 18 TSFSTNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 T S S L I++ G+ +T L G + G+ +GFD+D + ++ + D Sbjct: 31 TENSNEESTLAKIEEADKFVVGVKFDTRLFGLKD-PGTGEVEGFDIDIAKEIAKELLGDE 89 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 +KI+ + +K R L + QID + T+ E + F + + GQ ++ K Sbjct: 90 NKIELKEVTSKTRIPLLDNGQIDAIIAT--MTITEERKKEVNFSDVYFEAGQSLLVEKGS 147 Query: 136 GISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I + + +G + G T+ L + I E +E A ++ + DA Sbjct: 148 DIQGIDDIGAGTKVLAVKGATSGQNLLE----QAPDAEVIELENYQEAFLALQSGQGDAL 203 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 T D S LY + N S++ ++ + P A+ +GD E+ Sbjct: 204 TTDNSILYGMAEEN---SDYEVVGGTFTDEPYGIAVRKGDDEF 243 >gi|327183916|gb|AEA32363.1| amino acid ABC transporter periplasmic protein [Lactobacillus amylovorus GRL 1118] Length = 286 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 61/233 (26%), Positives = 104/233 (44%), Gaps = 17/233 (7%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 +N + + IK+RG+++ G+ L + V + G GFD+ R L+ + P ++ Sbjct: 42 SNNNSVTQIKRRGYIRIGVYGDLPPYGWVNSQGKRVGFDLRLARELAKELGVKP---RFT 98 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 LN R AL S ++D++ N T R + A + G + K I+S Sbjct: 99 QLNGNNRVDALNSDKVDMVLANFTKTPERAEVVDFAHPYMKV--STGVVSPKSHPITSEK 156 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 QL G + + G+T E +YF A+ + F+ + A + R A D S L Sbjct: 157 QLRGKQLILLKGSTGE----NYF-ANRPGIKLLRFDSETQQFNAMKNKRGAALADDNSYL 211 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM--VTAE 252 YA N P V + I +APA+ +G+ +++ WT+ + +TAE Sbjct: 212 YAWIKKN--PQYVVGIRSIGPHQFIAPAVKKGNK---SLLKWTNKQIDRLTAE 259 >gi|34496730|ref|NP_900945.1| ABC transporter periplasmic-binding protein [Chromobacterium violaceum ATCC 12472] gi|34102585|gb|AAQ58950.1| probable ABC transporter, periplasmic-binding protein [Chromobacterium violaceum ATCC 12472] Length = 283 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 64/242 (26%), Positives = 105/242 (43%), Gaps = 19/242 (7%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCR 65 +I + + TS + A L DIKK G L+ + GF + K G DVD + Sbjct: 20 TIALALAVALTSTAALADRLDDIKKAGVLRVAAFDSNPPFGFLDAKTR-QISGLDVDVAQ 78 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ + K+Q +P N R L S + DI++ N +T+ E + F + Sbjct: 79 HIAKKLG---VKLQLIPTNPANRVPLLVSGKADIVAAN--FTVTDERKKQVDFSLPYFAS 133 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD-YFKAHNMKYH--PIVFERVEEI 182 GQ FI+ +K + QL+G + V GTT E+ L + Y K + Y P+ F Sbjct: 134 GQQFIV-RKGALQKPEQLAGLRVGVDKGTTQEVYLREKYPKTTVVAYDDTPLAF------ 186 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A R A T D S L AL +++ + P +++ A + +G+ +V+ Sbjct: 187 -TALRNGNVQAITQDGSKLAALLANAPDKAKYELAPFTLTREFQAIGLPKGEARLTKVVN 245 Query: 243 WT 244 T Sbjct: 246 ET 247 >gi|212716832|ref|ZP_03324960.1| hypothetical protein BIFCAT_01775 [Bifidobacterium catenulatum DSM 16992] gi|212660117|gb|EEB20692.1| hypothetical protein BIFCAT_01775 [Bifidobacterium catenulatum DSM 16992] Length = 301 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 67/254 (26%), Positives = 108/254 (42%), Gaps = 22/254 (8%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 A L +IKK G LK + + F + G G+DV F L D K++Y + Sbjct: 54 ARTLDEIKKSGELKVAVFSDKAPFGYIDKEGKNAGYDVYFAERLGK---DLGVKVKYTSV 110 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 + R L S ++DI N T R+ + A +P G + + I+ VSQL Sbjct: 111 DPAARVDVLTSNKVDITLANFTVTDERKEKVDFA-KPYMKV-ALGVVSPENAEITDVSQL 168 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIV-FERVEEIDAAYRA---HRCDAYTGDIS 199 G ++ + GTT E YF+ K P V ++ ++ AY A R DA++ D + Sbjct: 169 KGKTLIIAKGTTAE----SYFE----KNEPDVKLQKYDQYADAYNALLDGRGDAFSTDNT 220 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 + A +N V + + + +APA+ +G+ E N W + +V + K Sbjct: 221 EVLAWAKSN--KGFKVGITKLGDEDTIAPAVQKGNKELLN---WLNDEIVKLGKENFFHK 275 Query: 260 NINQVSKDTTNPDV 273 + Q K DV Sbjct: 276 DYEQTLKPVYGSDV 289 >gi|225022582|ref|ZP_03711774.1| hypothetical protein CORMATOL_02622 [Corynebacterium matruchotii ATCC 33806] gi|224944650|gb|EEG25859.1| hypothetical protein CORMATOL_02622 [Corynebacterium matruchotii ATCC 33806] Length = 333 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 38/130 (29%), Positives = 67/130 (51%), Gaps = 7/130 (5%) Query: 29 DIKKRGFLKCGINTG--LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 +I RG L GI+ L+ F G+ +GF+VD + +++ IF +P+KI++ +++ Sbjct: 81 EIISRGRLIVGIDQSQNLLSFRNT-ITGELQGFEVDIAKEIAADIFGNPTKIEFRYVDSA 139 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM-HKKKGISSVSQLSG 145 +L+S QID+ R T R+ + F Y G I+ HK I +S++ G Sbjct: 140 NWIDSLESHQIDMAIRTLSITRDRQDQV---FFSTPYLKGSTKILVHKSSAIKGISEIGG 196 Query: 146 ASICVQAGTT 155 +CV + +T Sbjct: 197 RPVCVTSQST 206 >gi|297160476|gb|ADI10188.1| putative ABC transporter solute-binding protein [Streptomyces bingchenggensis BCW-1] Length = 338 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 56/112 (50%), Gaps = 7/112 (6%) Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT--DWTLL 109 A GD GFD++ RA++ IF DP + Y + +R ALQ ++DI+ R + L Sbjct: 107 ATGDLTGFDIELVRAIAKDIFGDPDAVIYRAIPTSQRVKALQQGKVDIVVRTMTINCDRL 166 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSV-SQLSGASICVQAGTTTELTL 160 ++++ A+ + GQ ++ K ++ + L G +C G+T E L Sbjct: 167 KDVAFSTAY----FKAGQQVLVPKGSSVTGYNTSLRGKKVCTAQGSTAEAEL 214 >gi|159027519|emb|CAO89483.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 299 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 51/229 (22%), Positives = 95/229 (41%), Gaps = 12/229 (5%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD---FCRALSSAIFDDPSK 77 S +I I+K G + G + F V + G W G+ +D R + P K Sbjct: 22 SLAGAIFDRIQKTGVITAGARKDAIPFGFVNSQGKWVGYSLDMLELIRKETERKLGKPIK 81 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF-DGQGFIMHKKKG 136 ++ + + + RF L++ IDI +T +T RE + + ++YF G + K Sbjct: 82 LKIVEVTPQNRFEKLKTGVIDIECGSTTFTWKRENEVDFS---VSYFAGGTQLLTRKGSN 138 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 + + L+G I V A TT E + A + E +++++ D + Sbjct: 139 LDDIGSLAGRRIGVIANTTNEAVIKTQQPAAILVKVKSRGEGLQKLETG----EIDGFAS 194 Query: 197 DISALYALKLTNDRPSEHVILPDI-ISKSPLAPAIIQGDTEWYNIVSWT 244 D L L+ P+ I+P + A + + D++W + V++T Sbjct: 195 DGITLEGLRKNAKNPNNLAIVPSYPYAYESYACTLPENDSKWRDTVNYT 243 >gi|289673926|ref|ZP_06494816.1| extracellular solute-binding protein [Pseudomonas syringae pv. syringae FF5] gi|330971240|gb|EGH71306.1| extracellular solute-binding protein [Pseudomonas syringae pv. aceris str. M302273PT] Length = 264 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 57/246 (23%), Positives = 103/246 (41%), Gaps = 17/246 (6%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 +L T + S L + KRG L G + + A+G +GFD+D R ++ +F+ Sbjct: 1 MLANTVQAAEGSKLDAVLKRGNLVVGTGSTNAPWHFQGADGKLQGFDIDIGRIIAKGLFN 60 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 DPSK++++ ++ R L + ++DI + T R + +AF Y +G ++ Sbjct: 61 DPSKVEFVVQSSDARIPNLLTDKVDISCQFITVTASR--AQQVAFTLPYYREGVALLLPA 118 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA------AYR 187 + L AG + + A + + + +V++ D+ A Sbjct: 119 NSKYKEIDDLKA------AGDDVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLMYQAIN 172 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT-HY 246 + R D D S++ L + N P + S A A+ +GD +W N V+ H Sbjct: 173 SGRADTAATDQSSVKYLMVQN--PGRYRSPAFAWSPQTYACAVKRGDQDWLNFVNTALHE 230 Query: 247 AMVTAE 252 AM E Sbjct: 231 AMTGVE 236 >gi|282864976|ref|ZP_06274030.1| extracellular solute-binding protein family 3 [Streptomyces sp. ACTE] gi|282560401|gb|EFB65949.1| extracellular solute-binding protein family 3 [Streptomyces sp. ACTE] Length = 304 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 5/143 (3%) Query: 32 KRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 +RG+L G E A+G + GFD++ R +++++ +P KI++ + + R Sbjct: 61 RRGYLVVGAKEDQPYLGEKDPASGVYSGFDIEIARMMAASLGFEPKKIRFRTIASANRET 120 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASIC 149 ALQ+ QID +R+ +G A Y GQG ++ + I L+G ++C Sbjct: 121 ALQNGQIDYYVGTYTINDMRKKIVGFAG--PYYMAGQGLLVRTDENDIHGPQDLAGKTVC 178 Query: 150 VQAGTTT-ELTLADYFKAHNMKY 171 AG+T + ADY KA + Y Sbjct: 179 SAAGSTPYQRIAADYPKAKLVAY 201 >gi|171318958|ref|ZP_02908088.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MEX-5] gi|171095843|gb|EDT40787.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MEX-5] Length = 271 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 66/228 (28%), Positives = 101/228 (44%), Gaps = 21/228 (9%) Query: 23 NASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 +A L DI+K G L+ + G+ + K+N G DVD+ +AL+ + K+Q Sbjct: 23 HADRLDDIRKAGVLRVATFDSNPPFGYVDGKSN-HIVGLDVDYAKALADKL---GVKLQL 78 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 P N R L S ++D++ N +T+ E + + F I YF + KK + S Sbjct: 79 QPTNPANRIPFLTSGKVDLVLAN--FTITDERAKQVDFS-IPYFSSGQQFLAKKGVLKSA 135 Query: 141 SQLSGASICVQAGTTTELTLAD-YFKAHNMKYH--PIVFERVEEIDAAYRAHRCDAYTGD 197 QL+ + GTT E+TL + Y KA + Y P F AA RA A T D Sbjct: 136 DQLNNLRVGADKGTTNEITLREKYPKATIVAYDDTPFAF-------AALRAGNVQAITQD 188 Query: 198 ISALYALKLTNDRPSEHVILPDI-ISKSPLAPAIIQGDTEWYNIVSWT 244 L L L N ++ +P IS + + +G+T V+ T Sbjct: 189 GPKLIGL-LANVPDKQNYEIPAFTISNDYMGVGVPKGETRLLGFVNDT 235 >gi|289643954|ref|ZP_06476056.1| extracellular solute-binding protein family 3 [Frankia symbiont of Datisca glomerata] gi|289506230|gb|EFD27227.1| extracellular solute-binding protein family 3 [Frankia symbiont of Datisca glomerata] Length = 254 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 35/148 (23%), Positives = 66/148 (44%), Gaps = 9/148 (6%) Query: 30 IKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 I RG+L G+ F V + G+++GFDVD + +F P +++ + A +R Sbjct: 16 IFDRGYLIVGVRPDTPPFGSVNPDTGEFEGFDVDIANLVGRWLFGAPRHVRFRAITAAQR 75 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 + +ID+ + + T R + + A + Y G ++ + S++ L G + Sbjct: 76 LPLVAQGEIDLSTGSLTATCDRLLEVDFAT--VYYMTATGLLVSRDSNYHSLADLGGRKV 133 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVF 176 C +GTT+ + N HPI + Sbjct: 134 CAASGTTSLQAI------ENEPSHPIPY 155 >gi|311069226|ref|YP_003974149.1| glutamine ABC transporter glutamine-binding lipoprotein [Bacillus atrophaeus 1942] gi|310869743|gb|ADP33218.1| glutamine ABC transporter (glutamine-binding lipoprotein) [Bacillus atrophaeus 1942] Length = 275 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 10/198 (5%) Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 ++GD +GFD+D + L+ I D +K ++ + +K R LQ+ ID + T+ E Sbjct: 67 SSGDIEGFDIDIAKQLAKDIAGDENKAEFKEVTSKTRIPMLQNGDIDAIVAT--MTITDE 124 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMK 170 + F + + GQ ++ K I SV L G + G+T+ + + KA N Sbjct: 125 RKKEVDFSNVYFEAGQSLLVKKGSAIKSVKDLKKGTKVLAVKGSTSSQNIRE--KAPNAT 182 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 + FE E A ++ + +A T D + LY + D ++ + + P A+ Sbjct: 183 V--LEFENYAEAFTALKSGQGEALTTDNAILYGMA---DENKDYQLTGKTFTDEPYGIAV 237 Query: 231 IQGDTEWYNIVSWTHYAM 248 +G +E ++ + M Sbjct: 238 KKGQSELVKEINASLKKM 255 >gi|330901546|gb|EGH32965.1| extracellular solute-binding protein [Pseudomonas syringae pv. japonica str. M301072PT] Length = 290 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 60/227 (26%), Positives = 98/227 (43%), Gaps = 19/227 (8%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 S ++S L IK R L G+ + F V G + GFD D + + + D KI++ Sbjct: 35 SPSSSYLETIKARDKLIVGVFSDKPPFGFVNEQGQYVGFDTDLGKRFAKDLLGDEKKIEF 94 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + + R LQS ++D++ N T R ++ P Q + + + ++ Sbjct: 95 VVVEPASRIPFLQSDKVDLILANMTVTPERREAVDFT-NPNLRVAVQALV-PQASPVKTL 152 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHP----IVFERVEEIDAAYRAHRCDAYTG 196 L+ + V GTT +L L K HP + FE+ E A R DAY Sbjct: 153 DDLASKTTIVTTGTTADLWLT--------KNHPDWKVLKFEKNSESLQALANGRGDAYAQ 204 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE---WYNI 240 D L++ N P V+ + ++P+APA+ +G+ E W NI Sbjct: 205 DNLVLFSWAKKN--PGYRVLEQKLGDEAPIAPAVKKGNIELRDWVNI 249 >gi|315038756|ref|YP_004032324.1| amino acid ABC transporter periplasmic protein [Lactobacillus amylovorus GRL 1112] gi|312276889|gb|ADQ59529.1| amino acid ABC transporter periplasmic protein [Lactobacillus amylovorus GRL 1112] Length = 286 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 61/233 (26%), Positives = 103/233 (44%), Gaps = 17/233 (7%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 +N + + IK+RG+++ G+ L + V + G GFD+ R L+ + P ++ Sbjct: 42 SNNNSVTQIKRRGYIRIGVYGDLPPYGWVNSQGKRVGFDLRLARELAKELGVKP---RFT 98 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 LN R AL S ++D++ N T R + A + G + K I+S Sbjct: 99 QLNGNNRVDALNSDKVDMVLANFTKTPERAEVVDFAHPYMKV--STGVVSPKSHPITSEK 156 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 QL G + + G+T E +YF A + F+ + A + R A D S L Sbjct: 157 QLRGKQLILLKGSTGE----NYF-AKRPGIKLLRFDSETQQFNAMKNKRGAALADDNSYL 211 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM--VTAE 252 YA N P V + I +APA+ +G+ +++ WT+ + +TAE Sbjct: 212 YAWIKKN--PQYVVGIRSIGPHQFIAPAVKKGNK---SLLKWTNKQINRLTAE 259 >gi|77459314|ref|YP_348821.1| extracellular solute-binding protein [Pseudomonas fluorescens Pf0-1] gi|77383317|gb|ABA74830.1| amino acid ABC transporter substrate-binding protein, PAAT family [Pseudomonas fluorescens Pf0-1] Length = 282 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 54/235 (22%), Positives = 99/235 (42%), Gaps = 17/235 (7%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L + RG L G + + A+G +GFD+D R ++ +F+DPSK++++ + Sbjct: 30 SKLDSVLARGKLIVGTGSTNAPWHFQGADGKLQGFDIDIARMVAKGLFNDPSKVEFVVQS 89 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 + R L + ++D+ + T R + +AF Y +G G ++ + L Sbjct: 90 SDARIPNLLTDKVDMSCQFITVTASR--AQQVAFTLPYYREGVGLLLPNNSKYKEIEDLQ 147 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA------AYRAHRCDAYTGDI 198 G + + A + + + +V++ D+ A + R DA D Sbjct: 148 A------GGDGVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLMYQAVNSGRADAAATDQ 201 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT-HYAMVTAE 252 S++ L + N P + S A A+ +GD +W N V+ H AM E Sbjct: 202 SSVKYLMVQN--PGRYRSPTYAWSPQTYACAVKRGDQDWLNFVNTALHEAMTGVE 254 >gi|261820369|ref|YP_003258475.1| extracellular solute-binding protein family 3 [Pectobacterium wasabiae WPP163] gi|261604382|gb|ACX86868.1| extracellular solute-binding protein family 3 [Pectobacterium wasabiae WPP163] Length = 274 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 51/193 (26%), Positives = 85/193 (44%), Gaps = 14/193 (7%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD----FCRALSSAIFDDPSKI 78 +A +L I RG + N A ++++G+ KG +D F + LS+ + K+ Sbjct: 18 HADVLEKIADRGVISVCTNVNNPPLAFLESSGETKGLHIDLLNDFTQRLSTQL-GKTVKV 76 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF-RPITYFDGQGFIMHKKKGI 137 +P+ R LQ + DIL T T+ E + F P Y G + K Sbjct: 77 DLVPVLPANRVQFLQQGKCDILF--TSLTVSEERKKLVQFVEPYYYAAGPALLTKKGVTF 134 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 S+ ++ G +IC G++ + L F A+ + F+ +E+D + R RC A D Sbjct: 135 SNWEEVKGKAICSNQGSSWNVPLEQKFGAN-----IVAFQTQQEVDQSLRDGRCAALVSD 189 Query: 198 ISALYALKLTNDR 210 S L A + ND+ Sbjct: 190 DSYLQA-RFLNDK 201 >gi|114705497|ref|ZP_01438400.1| hypothetical protein FP2506_13564 [Fulvimarina pelagi HTCC2506] gi|114538343|gb|EAU41464.1| hypothetical protein FP2506_13564 [Fulvimarina pelagi HTCC2506] Length = 292 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 55/187 (29%), Positives = 84/187 (44%), Gaps = 17/187 (9%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L G N G V + NG+ GF+V+ + ++S + + IQ +P N F A+QS Sbjct: 53 MLTAGANVGNVPWEFQDENGEITGFEVELLQEVASRLDYEGVDIQNIPFNG--LFSAVQS 110 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDG-QGFIMHKKKGISSVSQLSGASICVQAG 153 +ID+ + T R S+ A +P Y+D Q GISS L G ++ V G Sbjct: 111 GRIDVAISSITITDERLQSVSFA-QP--YYDSDQSLSTRTDSGISSTQDLEGKTVGVDTG 167 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAY---RAHRCDAYTGDISAL-YALKLTND 209 +T ++ Y + R E ++ A A R DAY DI A+ Y L+ D Sbjct: 168 STGDM----YASEREADWGLAGISRYEGLNPAMLDLAAGRIDAYVSDIPAVAYYLR---D 220 Query: 210 RPSEHVI 216 +P V+ Sbjct: 221 KPDMEVV 227 >gi|27375213|ref|NP_766742.1| glutamate/aspartate periplasmic binding protein [Bradyrhizobium japonicum USDA 110] gi|27348349|dbj|BAC45367.1| glutamate/aspartate periplasmic binding protein precursor [Bradyrhizobium japonicum USDA 110] Length = 308 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 56/241 (23%), Positives = 101/241 (41%), Gaps = 6/241 (2%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 S+L L T + L IKK ++ G F+ + +G G+ ++ C A+ Sbjct: 19 SLLATTALAQTGSEGLSPTLSAIKKAHVVRLGYRESSPPFSFLDQSGRPIGYSLELCEAI 78 Query: 68 SSAI---FDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 I DDP+ KI Y+ + + +R A+ +ID+ +T T E + +AF P+ + Sbjct: 79 VEEIGVEVDDPNLKIDYVKVTSDDRIDAVLQNKIDLECGST--TANAERAKRVAFSPLMF 136 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 G ++ K + S++ L G +I V GTT E + K ++ V E+ Sbjct: 137 VAGTKLMVPKASSVQSLTDLKGKTIVVTKGTTNEQAIQAADKKSSLGLTIAVGADHEQSF 196 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 + DA+ D L L + ++ + D +S P +G+ + +V Sbjct: 197 QMLADGKADAFATDDILLSGLIARHKAQDKYRVTGDYLSYDPYGIMFRKGEPQLSAVVER 256 Query: 244 T 244 T Sbjct: 257 T 257 >gi|299066929|emb|CBJ38124.1| glutamate/aspartate transport protein (ABC superfamily, peri_bind) high affinity periplasmic solute-binding protein [Ralstonia solanacearum CMR15] Length = 304 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 55/253 (21%), Positives = 108/253 (42%), Gaps = 16/253 (6%) Query: 8 SILCLIILFF---TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK-GFDVDF 63 ++LC + F T+ ++ +L I+ G ++ F+ A+ G+ VD Sbjct: 12 ALLCTSLSIFSPGTALASATPVLDRIRDTGTVRIAYRESASPFSYYDADSKKPIGYTVDL 71 Query: 64 C----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 C L + + K+QY+ + R A+Q + D+ T T RE +AF Sbjct: 72 CLRVVDKLRTELKRPDLKVQYVLITPSTRIPAIQEGKADLECSTT--TNNRERREQVAFT 129 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G ++ GI L ++ GTT+ +A+ K ++ + I FE V Sbjct: 130 IPHYIAGIRMLVKTASGIHKWDDLRDKTVVSTKGTTS---VAELRKMNDSRVLRIKFEEV 186 Query: 180 EEIDAAY---RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 +E A+ + + DA+ D LY+ + P ++ ++ D+++ P A + + D + Sbjct: 187 KEHAEAFAMVESGKADAFVMDDVQLYSFRANAKHPQDYTVVGDMMTVEPYAIMLSKSDPD 246 Query: 237 WYNIVSWTHYAMV 249 + + V A++ Sbjct: 247 FKHTVDRAMTAII 259 >gi|168186417|ref|ZP_02621052.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Clostridium botulinum C str. Eklund] gi|169295555|gb|EDS77688.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Clostridium botulinum C str. Eklund] Length = 272 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 68/249 (27%), Positives = 104/249 (41%), Gaps = 43/249 (17%) Query: 30 IKKRGFLKCGINTGL--VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 +KK G L G++ G + F + K N GFDVD R + I K++++P Sbjct: 40 VKKSGKLLVGLDDGYPPMEFRDEKNN--LVGFDVDLAREIGKKI---GVKVEFIPTEFSG 94 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS--- 144 L LQSK+ D + +T+ E L F GQ I+ KKG +S+ +LS Sbjct: 95 ILLGLQSKKFDTII--AGFTMTDERKKSLNFTEPYVLGGQ--IVAVKKGNTSIKKLSDLK 150 Query: 145 GASICVQAGTTTELTLADYFK--AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD--ISA 200 G I Q G+ ++T K KY ++ E + R DA D + Sbjct: 151 GKIIGCQMGSAGQITAERKLKDIKELRKYG-----KITETFSDMSIGRIDAVIMDAQVGG 205 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 Y K +P + +L ++++K P+ A +GD N V QK Sbjct: 206 YYISK----KPGQFEVLDEMVAKEPMGIAFRKGDNALKNEV----------------QKI 245 Query: 261 INQVSKDTT 269 IN++ KD T Sbjct: 246 INELKKDGT 254 >gi|319943773|ref|ZP_08018054.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lautropia mirabilis ATCC 51599] gi|319743006|gb|EFV95412.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lautropia mirabilis ATCC 51599] Length = 274 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 8/208 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L IK ++ G+ F + + G +GFDV+ + + + P K++Y+ A Sbjct: 31 LARIKASDRIRIGVFGDKPPFGYIDSEGKSQGFDVEIAKDFAKDLLGSPDKVEYVITEAA 90 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 R L+S ++DI+ N +T +E + + F G + K I SV++L G Sbjct: 91 NRVEYLKSGKVDIILAN--FTQTKERARVVDFAAPYMKVSLGVVSPTKAPIKSVNELEGK 148 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 ++ V GTT + YF + +++ E A + R A D + L+A Sbjct: 149 TLLVNKGTTADA----YFSKKYPDISLLKYDQNTETFDALKDGRGAALAHDNALLWAWAK 204 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGD 234 N P V + + +APA+ +GD Sbjct: 205 EN--PGYEVAIGQLGEPEFIAPAVKKGD 230 >gi|227903457|ref|ZP_04021262.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus acidophilus ATCC 4796] gi|227868777|gb|EEJ76198.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus acidophilus ATCC 4796] Length = 284 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 56/242 (23%), Positives = 104/242 (42%), Gaps = 16/242 (6%) Query: 1 MYKDFFVSILCLIILFFT----SFSTNASILGDIKKRGFLKCGI--NTGLVGFAEVKANG 54 M K +F+S + +L T + N SI +K+ + G+ +T L G +K +G Sbjct: 13 MRKKYFLSTFLIALLAITLSACGQNKNQSIYQTVKETKSITWGVKADTPLFGSMSIK-DG 71 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 +GF++D AL+ I +K ++ A + L+++ +D + T+ E Sbjct: 72 KVRGFEIDLAEALTHKILGKQAKANFVTTTANTKIQLLKNRNVDAVI--AAMTITPERKK 129 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + F + GQ ++ K I++V L+ + + GTT+ AD + K + Sbjct: 130 QVEFSKPYFPAGQSIMVAKNSKINNVKDLNNKRVLIVKGTTS----ADAVRKFAPKAEIL 185 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 F+ + AA +A + DA+ D L + N S + I + P A+ +G Sbjct: 186 QFDDYGQAFAALKADQGDAFVTDNGILAGILRDN---SGYKIAGGTFTNQPYGIAVNKGQ 242 Query: 235 TE 236 E Sbjct: 243 NE 244 >gi|182435043|ref|YP_001822762.1| putative glutamate ABC transporter substrate-binding protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326775559|ref|ZP_08234824.1| ABC-type transporter, periplasmic subunit family 3 [Streptomyces cf. griseus XylebKG-1] gi|178463559|dbj|BAG18079.1| putative glutamate ABC transporter substrate-binding protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326655892|gb|EGE40738.1| ABC-type transporter, periplasmic subunit family 3 [Streptomyces cf. griseus XylebKG-1] Length = 309 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 42/144 (29%), Positives = 70/144 (48%), Gaps = 5/144 (3%) Query: 31 KKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 KKRG+L G E A+G + GFD++ R +++++ +P I++ + + R Sbjct: 65 KKRGYLVVGAKEDQPYLGEKDPASGIYSGFDIEIARMMAASLGFEPKTIRFRTIASANRE 124 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASI 148 ALQ+ QID +R+ +G A Y GQG ++ + I L+G ++ Sbjct: 125 TALQNGQIDYYVGTYTINDMRKKLVGFAG--PYYMAGQGLLVRTDENDIHGPQDLAGKTV 182 Query: 149 CVQAGTTT-ELTLADYFKAHNMKY 171 C AG+T + ADY KA + Y Sbjct: 183 CSAAGSTPYQRIAADYPKATLVAY 206 >gi|126739646|ref|ZP_01755338.1| putative ABC transporter periplasmic amino acid-binding protein [Roseobacter sp. SK209-2-6] gi|126719292|gb|EBA16002.1| putative ABC transporter periplasmic amino acid-binding protein [Roseobacter sp. SK209-2-6] Length = 267 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 5/151 (3%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 ++ L L I ++ + A L ++ RG L+CG+ AN + GFDV++C Sbjct: 5 LAALGLAIGLSSTGAAVADTLDNVVDRGTLRCGVVLDFPPIGYRDANNEPAGFDVEYCAD 64 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L++A+ D + LP+ ER + + + D++ T +L R ++G P + Sbjct: 65 LAAALEVD---YEILPVTWAERLPVIVTGRADVVFGGTSDSLARARTVGFTI-PYAIYYA 120 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTE 157 QG +++ + GI S + G + GT E Sbjct: 121 QG-VVNAESGIKSFDDVRGKRVAGAVGTVPE 150 >gi|306836971|ref|ZP_07469921.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Corynebacterium accolens ATCC 49726] gi|304567154|gb|EFM42769.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Corynebacterium accolens ATCC 49726] Length = 339 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 7/130 (5%) Query: 29 DIKKRGFLKCGIN--TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 DI KRG L G++ L+ + + A+GD +GF+VD ++ IF DP+K+ + + + Sbjct: 89 DIVKRGRLIVGVDRSNNLLSYRDA-ASGDVRGFEVDIAHEIARDIFGDPNKVDFRFVESS 147 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG-FIMHKKKGISSVSQLSG 145 +R AL + +DI+ R + RE + + I Y Q ++ G++S+ G Sbjct: 148 DRTAALDNGTVDIIVRTMTISPEREKEVAFS---IPYMTTQTRMLVLTSSGMNSIDDADG 204 Query: 146 ASICVQAGTT 155 +C G+T Sbjct: 205 KRLCGVRGST 214 >gi|237800640|ref|ZP_04589101.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331023499|gb|EGI03556.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 283 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 55/236 (23%), Positives = 97/236 (41%), Gaps = 5/236 (2%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 T + S L + KRG L G + + A+G +GFD+D R ++ +F+DPSK Sbjct: 24 TGQAAQGSKLEAVLKRGNLVVGTGSTNAPWHFQGADGKLQGFDIDIGRIIAKGLFNDPSK 83 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++++ ++ R L + ++DI + T R + +AF Y +G ++ Sbjct: 84 VEFVVQSSDARIPNLLTDKVDISCQFITVTASR--AQQVAFTLPYYREGVALLLPANSKY 141 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + L A V + + K ++ V+ + A + R D D Sbjct: 142 KEIDDLKAAGDGVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLMYQAINSGRADTAATD 201 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT-HYAMVTAE 252 S++ L + N P + S A A+ +GD +W N V+ H AM E Sbjct: 202 QSSVKYLMVQN--PGRYRSPSFAWSPQTYACAVKRGDQDWLNFVNTALHEAMTGVE 255 >gi|283455613|ref|YP_003360177.1| glutamine-binding protein glnH [Bifidobacterium dentium Bd1] gi|283102247|gb|ADB09353.1| glnH Glutamine-binding protein glnH [Bifidobacterium dentium Bd1] Length = 276 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 22/220 (10%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L +IKK G LK + + F V +G++ G+DV F L+ + K Y ++ Sbjct: 31 LDEIKKSGELKVAVFSDKAPFGYVDKDGNYAGYDVYFAERLAKDL---GVKAAYTSVDPA 87 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 R L S ++D+ N T R+ + A +P G + + I+ VSQL G Sbjct: 88 ARVDVLTSNKVDVTLANFTVTDERKEKVDFA-KPYMKV-ALGVVSPEGAEITDVSQLKGK 145 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHP-IVFERVEEIDAAYRA---HRCDAYTGDISALY 202 ++ V GTT E YF+ K P I ++ ++ AY A R DA++ D + + Sbjct: 146 TLIVAKGTTAET----YFE----KNEPDIKLQKYDQYADAYNALLDGRGDAFSTDNTEVL 197 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE---WYN 239 A +N V + + + +APA+ +G+ E W N Sbjct: 198 AWAKSN--KGFKVGITKLGDEDTIAPAVQKGNKELLDWIN 235 >gi|58198299|gb|AAW65857.1| putative lipoprotein P30Hm13 [Helicobacter muridarum] Length = 268 Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 54/214 (25%), Positives = 86/214 (40%), Gaps = 8/214 (3%) Query: 30 IKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 IKKRG L G+ FA + +GF++D + L+ + D +KI+ P+ AK R Sbjct: 42 IKKRGVLIVGVKKDAPNFALMNHKTQQIEGFEIDMAKMLAKQMLGDENKIKLEPVTAKTR 101 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 L + +DI+ +T+ E F Y D GF++ K+ S L I Sbjct: 102 GPLLDNGTLDIVIAT--FTITDERKKTYNFTESYYSDPIGFLVLKENNFKSFKDLDDKVI 159 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 V TT + + + F + +A + R DA++ D S L N Sbjct: 160 GVAQAATTNKVVTEAAADLGITVKIKEFPDYPSLKSALDSKRIDAFSVDKSILRGYLDAN 219 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + IL D + A + D +W N V+ Sbjct: 220 NE-----ILDDNLKAQEYGMATRKEDIDWSNYVN 248 >gi|171740998|ref|ZP_02916805.1| hypothetical protein BIFDEN_00060 [Bifidobacterium dentium ATCC 27678] gi|171276612|gb|EDT44273.1| hypothetical protein BIFDEN_00060 [Bifidobacterium dentium ATCC 27678] Length = 311 Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 61/220 (27%), Positives = 99/220 (45%), Gaps = 22/220 (10%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L +IKK G LK + + F V +G++ G+DV F L+ D K Y ++ Sbjct: 66 LDEIKKSGELKVAVFSDKAPFGYVDKDGNYAGYDVYFAERLAK---DLGVKAAYTSVDPA 122 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 R L S ++D+ N T R+ + A +P G + + I+ VSQL G Sbjct: 123 ARVDVLTSNKVDVTLANFTVTDERKEKVDFA-KPYMKV-ALGVVSPEGAEITDVSQLKGK 180 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHP-IVFERVEEIDAAYRA---HRCDAYTGDISALY 202 ++ V GTT E YF+ K P I ++ ++ AY A R DA++ D + + Sbjct: 181 TLIVAKGTTAET----YFE----KNEPDIKLQKYDQYADAYNALLDGRGDAFSTDNTEVL 232 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE---WYN 239 A +N V + + + +APA+ +G+ E W N Sbjct: 233 AWAKSN--KGFKVGITKLGDEDTIAPAVQKGNKELLDWIN 270 >gi|330875049|gb|EGH09198.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 283 Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 54/233 (23%), Positives = 97/233 (41%), Gaps = 5/233 (2%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + +S L + KRG L G + + A+G +GFD+D R ++ +F+DPSK+++ Sbjct: 27 AAESSKLDAVLKRGNLVVGTGSTNAPWHFQGADGKLQGFDIDIGRIIAKGLFNDPSKVEF 86 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + ++ R L + ++DI + T R + +AF Y +G ++ + Sbjct: 87 VVQSSDARIPNLLTDKVDISCQFITVTASR--AQQVAFTLPYYREGVALLLPANSKYKEI 144 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L A V + + K ++ V+ + A + R D D S+ Sbjct: 145 DDLKAAGDGVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLMYQAINSGRADTAATDQSS 204 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT-HYAMVTAE 252 + L + N P + S A A+ +GD +W N V+ H AM E Sbjct: 205 VKYLMVQN--PGRYRSPAFAWSPQTYACAVKRGDQDWLNFVNTALHEAMTGVE 255 >gi|227502018|ref|ZP_03932067.1| amino acid ABC superfamily ATP binding cassette transporter glutamin-binding protein [Corynebacterium accolens ATCC 49725] gi|227077302|gb|EEI15265.1| amino acid ABC superfamily ATP binding cassette transporter glutamin-binding protein [Corynebacterium accolens ATCC 49725] Length = 335 Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 7/130 (5%) Query: 29 DIKKRGFLKCGIN--TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 DI KRG L G++ L+ + + A+GD +GF+VD ++ IF DP+K+ + + + Sbjct: 85 DILKRGRLIVGVDRSNNLLSYRDA-ASGDVRGFEVDIAHEIARDIFGDPNKVDFRFVESS 143 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG-FIMHKKKGISSVSQLSG 145 +R AL + +DI+ R + RE + + I Y Q ++ G++S+ G Sbjct: 144 DRTAALDNGTVDIIVRTMTISPEREKEVAFS---IPYMTTQTRMLVLTSSGMNSIDDADG 200 Query: 146 ASICVQAGTT 155 +C G+T Sbjct: 201 KRLCGVRGST 210 >gi|254504149|ref|ZP_05116300.1| Bacterial extracellular solute-binding protein, family 3 [Labrenzia alexandrii DFL-11] gi|222440220|gb|EEE46899.1| Bacterial extracellular solute-binding protein, family 3 [Labrenzia alexandrii DFL-11] Length = 280 Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 37/136 (27%), Positives = 62/136 (45%), Gaps = 5/136 (3%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 T A L D+ RG L+CG+ AN + GFDVD+C+ L++A+ + Sbjct: 33 TQADTLDDVVDRGELRCGVVLDFPPIGYRDANNEPAGFDVDYCKDLAAAL---EVEATIY 89 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 P+ ER + + + D++ T +L R ++G P + QG +++ GI S Sbjct: 90 PVTWAERLPVIVTGRADVVFGATSDSLARARTVGFTI-PYAIYYAQG-VVNADSGIESFE 147 Query: 142 QLSGASICVQAGTTTE 157 + G + GT E Sbjct: 148 DIRGKRVAGAIGTVPE 163 >gi|332107601|gb|EGJ08825.1| polar amino acid transporter substrate-binding protein [Rubrivivax benzoatilyticus JA2] Length = 270 Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 72/261 (27%), Positives = 106/261 (40%), Gaps = 21/261 (8%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L DI+K G L+ F V A G DVD+ A + + K+Q +P N Sbjct: 26 LADIQKAGVLRVAAFDANPPFGYVDAKTKKIVGLDVDYAEAFAKKLG---VKLQIVPTNP 82 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 R L S ++D++ N T R +G + I YF + +K + S QLSG Sbjct: 83 ANRVPLLASNKVDLVFANFTITEERAKVVGFS---IPYFASGTQFIARKGTLKSPEQLSG 139 Query: 146 ASICVQAGTTTELTLAD-YFKAHNMKYH--PIVFERVEEIDAAYRAHRCDAYTGDISALY 202 I V GTT E+ L + Y +A + Y P F A R A + D L Sbjct: 140 LRIGVDKGTTNEIQLREKYPQATLVAYDDTPFAF-------TALRNGNVQAISQDGPKLI 192 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 L ++ I P IS+ + I +G+T V+ T ++ E G QK + Sbjct: 193 GLLANVPDRDKYEIPPFAISQDYIGVGIPKGETALTEFVNKT---LLELEADGRAQKIYD 249 Query: 263 QVSKDTTNPDVQRFLGI-DKS 282 TT ++R I DK+ Sbjct: 250 TWFGPTTKTPLKRIFKIGDKT 270 >gi|311694310|gb|ADP97183.1| ABC transporter periplasmic amino acid-binding protein [marine bacterium HP15] Length = 272 Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 44/140 (31%), Positives = 62/140 (44%), Gaps = 5/140 (3%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 TS S A L + +RG L CG+ N + GFDVD+C L A+ D Sbjct: 16 TSVSATADQLDTVIQRGTLNCGVVLDFPPMGYFDENNEPAGFDVDYCNDLGEALGVD--- 72 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 + L L ER +L S + D++ +T TL R ++G + P F Q I ++ K I Sbjct: 73 VNVLNLTWGERIPSLVSGKTDVVIGSTSDTLERAKTVGFTY-PYFVFKFQ-VIANEDKNI 130 Query: 138 SSVSQLSGASICVQAGTTTE 157 S L + GTT E Sbjct: 131 ESFDDLKNLKVGAALGTTYE 150 >gi|328462032|gb|EGF34212.1| glutamine ABC transporter [Lactobacillus helveticus MTCC 5463] Length = 272 Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 59/243 (24%), Positives = 104/243 (42%), Gaps = 18/243 (7%) Query: 1 MYKDFFVSILCLIILFFT----SFSTNASILGDIKKRGFLKCGI--NTGLVGFAEVKANG 54 M K FF+S L + I FT S + ++ +K + G+ +T L G +K G Sbjct: 1 MKKRFFLSTLLIGIALFTLSACSQNKKQNVYQTVKSTKTINWGVKADTPLFGSMNIKT-G 59 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 GF++D +AL+ + +K ++ A + L+++ +D + T RE + Sbjct: 60 KINGFEIDLAKALTKEMLGKNAKANFVTTTANTKIQLLKNRNVDAVIAAMTITPEREKQV 119 Query: 115 GLAFRPITYFD-GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + +P YF GQ ++ K I +V L+ + V GTT AD K K Sbjct: 120 NFS-KP--YFPAGQSIMVAKNNKIKNVKDLNNKKVLVVKGTTA----ADAVKKFAPKAEI 172 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + F+ + A +A + DA+ D L + S + ++ + P A+ +G Sbjct: 173 LQFDDYGQAFTALKAGQGDAFVTDNGILVGIL---RDSSGYKLVGGNFTNQPYGIAVNKG 229 Query: 234 DTE 236 TE Sbjct: 230 QTE 232 >gi|145296749|ref|YP_001139570.1| hypothetical protein cgR_2653 [Corynebacterium glutamicum R] gi|140846669|dbj|BAF55668.1| hypothetical protein [Corynebacterium glutamicum R] Length = 344 Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 68/130 (52%), Gaps = 7/130 (5%) Query: 30 IKKRGFLKCGINTG--LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 I RG + G++ L+ F + G+ +GF+V+ R +S IF DP+K+ + + + + Sbjct: 89 IVNRGRIIVGVDQSQNLLSFRD-PVTGELRGFEVELAREISRDIFGDPNKVDFRFVGSSD 147 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG-FIMHKKKGISSVSQLSGA 146 R +L +DI+ R+ T+ E + + F Y Q + + GI+S++ L G Sbjct: 148 RLRSLDQGDVDIVIRSV--TITDERAKLVEFS-TPYLRTQTRMLTMESSGITSIADLPGH 204 Query: 147 SICVQAGTTT 156 +ICV G+T+ Sbjct: 205 TICVTDGSTS 214 >gi|307708866|ref|ZP_07645326.1| ABC transporter substrate-binding protein [Streptococcus mitis SK564] gi|307620202|gb|EFN99318.1| ABC transporter substrate-binding protein [Streptococcus mitis SK564] Length = 288 Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 56/228 (24%), Positives = 105/228 (46%), Gaps = 23/228 (10%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + A + +IKK G L+ + F V +G ++G+D++ L+ D ++Y Sbjct: 37 TAKARTIDEIKKSGELRIAVFGDKKPFGYVDNDGSYQGYDIELGNQLAQ---DLGVNVKY 93 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKKGIS 138 + ++A R L S ++DI N T R ++ L + ++ G + K I+ Sbjct: 94 VSVDAANRAEYLISNKVDITLANFTVTDERKKQVDFALPYMKVSL----GVVSPKTGLIT 149 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV-FERVEEIDAAYRA---HRCDAY 194 V QL G ++ V GTT E YF+ K HP V ++ ++ +Y+A R DA+ Sbjct: 150 DVKQLEGKTLIVTKGTTAET----YFE----KNHPEVKLQKYDQYSDSYQALLDGRGDAF 201 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + D + + A L N V + + + +A A+ +G+ E + ++ Sbjct: 202 STDNTEVLAWALEN--KGFEVGITSLGNPDTIAAAVQKGNQELLDFIN 247 >gi|66045739|ref|YP_235580.1| extracellular solute-binding protein [Pseudomonas syringae pv. syringae B728a] gi|302186218|ref|ZP_07262891.1| extracellular solute-binding protein [Pseudomonas syringae pv. syringae 642] gi|63256446|gb|AAY37542.1| extracellular solute-binding protein, family 3 [Pseudomonas syringae pv. syringae B728a] Length = 283 Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 57/246 (23%), Positives = 103/246 (41%), Gaps = 17/246 (6%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 +L T + S L + KRG L G + + A+G +GFD+D R ++ +F+ Sbjct: 20 MLANTVQAAEGSKLDAVLKRGNLVVGTGSTNAPWHFQGADGKLQGFDIDIGRIIAKGLFN 79 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 DPSK++++ ++ R L + ++DI + T R + +AF Y +G ++ Sbjct: 80 DPSKVEFVVQSSDARIPNLLTDKVDISCQFITVTASR--AQQVAFTLPYYREGVALLLPA 137 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA------AYR 187 + L AG + + A + + + +V++ D+ A Sbjct: 138 NSKYKEIDDLKA------AGDDVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLMYQAIN 191 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT-HY 246 + R D D S++ L + N P + S A A+ +GD +W N V+ H Sbjct: 192 SGRADTAATDQSSVKYLMVQN--PGRYRSPAFAWSPQTYACAVKRGDQDWLNFVNTALHE 249 Query: 247 AMVTAE 252 AM E Sbjct: 250 AMTGVE 255 >gi|315929488|gb|EFV08683.1| Amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Campylobacter jejuni subsp. jejuni 305] Length = 168 Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 42/150 (28%), Positives = 74/150 (49%), Gaps = 3/150 (2%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDP 75 F++ + L IK +G L G+ + +A + +A G+ KGF+VD + L+ +I D Sbjct: 21 FSNANAAEGKLESIKSKGQLIVGVKNDVPHYALLDQATGEIKGFEVDVAKLLAKSILGDD 80 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 KI+ + +NAK R L + +D + +T+ E F Y D G ++ K+K Sbjct: 81 KKIKLVAVNAKTRGPLLDNGSVDAVI--ATFTITPERKRIYNFSEPYYQDAIGLLVLKEK 138 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFK 165 S++ + GA+I V TT+ + + K Sbjct: 139 KYKSLADMKGANIGVAQAATTKKAIGEAAK 168 >gi|297156308|gb|ADI06020.1| putative glutamate ABC transporter substrate-binding protein [Streptomyces bingchenggensis BCW-1] Length = 310 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 41/145 (28%), Positives = 71/145 (48%), Gaps = 7/145 (4%) Query: 31 KKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 K+RG+L G E A G + GFD++ + +++++ DP +++ + + R Sbjct: 64 KRRGYLVVGAKEDQPYLGEKDPATGRYSGFDIEIAKMMAASLGFDPKTVRFKTIASANRE 123 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYF-DGQGFIMHK-KKGISSVSQLSGAS 147 ALQ+ QID LR+ +G A YF GQ ++ + I L+G + Sbjct: 124 TALQNGQIDYYVGTYTINPLRKRLVGFAG---PYFIAGQSLLVRTDEHDIHGPKDLAGKT 180 Query: 148 ICVQAGTTTELTL-ADYFKAHNMKY 171 +C AG+T + + +DY KAH + Y Sbjct: 181 VCSVAGSTPLMRIQSDYPKAHAVAY 205 >gi|58336899|ref|YP_193484.1| glutamine ABC transporter [Lactobacillus acidophilus NCFM] gi|58254216|gb|AAV42453.1| glutamine ABC transporter [Lactobacillus acidophilus NCFM] Length = 272 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 56/242 (23%), Positives = 104/242 (42%), Gaps = 16/242 (6%) Query: 1 MYKDFFVSILCLIILFFT----SFSTNASILGDIKKRGFLKCGI--NTGLVGFAEVKANG 54 M K +F+S + +L T + N SI +K+ + G+ +T L G +K +G Sbjct: 1 MRKKYFLSTFLIALLAITLSACGQNKNQSIYQTVKETKSITWGVKADTPLFGSMSIK-DG 59 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 +GF++D AL+ I +K ++ A + L+++ +D + T+ E Sbjct: 60 KVRGFEIDLAEALTHKILGKQAKANFVTTTANTKIQLLKNRNVDAVI--AAMTITPERKK 117 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + F + GQ ++ K I++V L+ + + GTT+ AD + K + Sbjct: 118 QVEFSKPYFPAGQSIMVAKNSKINNVKDLNNKRVLIVKGTTS----ADAVRKFAPKAEIL 173 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 F+ + AA +A + DA+ D L + N S + I + P A+ +G Sbjct: 174 QFDDYGQAFAALKADQGDAFVTDNGILAGILRDN---SGYKIAGGTFTNQPYGIAVNKGQ 230 Query: 235 TE 236 E Sbjct: 231 NE 232 >gi|19553943|ref|NP_601945.1| ABC-type transport system, periplasmic component [Corynebacterium glutamicum ATCC 13032] gi|62391586|ref|YP_226988.1| ABC-type amino acid transport system, component [Corynebacterium glutamicum ATCC 13032] gi|21325522|dbj|BAC00144.1| ABC-type amino acid transport system, periplasmic component [Corynebacterium glutamicum ATCC 13032] gi|41326928|emb|CAF20772.1| ABC-type amino acid transport system, secreted component [Corynebacterium glutamicum ATCC 13032] Length = 344 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 68/130 (52%), Gaps = 7/130 (5%) Query: 30 IKKRGFLKCGINTG--LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 I RG + G++ L+ F + G+ +GF+V+ R +S IF DP+K+ + + + + Sbjct: 89 IVNRGRIIVGVDQSQNLLSFRD-PVTGELRGFEVELAREISRDIFGDPNKVDFRFVGSSD 147 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG-FIMHKKKGISSVSQLSGA 146 R +L +DI+ R+ T+ E + + F Y Q + + GI+S++ L G Sbjct: 148 RLRSLDQGDVDIVIRSV--TITDERAKLVEFS-TPYLRTQTRMLTMESSGITSIADLPGH 204 Query: 147 SICVQAGTTT 156 +ICV G+T+ Sbjct: 205 TICVTDGSTS 214 >gi|330960987|gb|EGH61247.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 283 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 54/233 (23%), Positives = 97/233 (41%), Gaps = 5/233 (2%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + + S L + KRG L G + + A+G +GFD+D R ++ +F+DPSK+++ Sbjct: 27 AADGSKLDAVLKRGNLIVGTGSTNAPWHFQGADGKLQGFDIDIGRIIAKGLFNDPSKVEF 86 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + ++ R L + ++DI + T R + +AF Y +G ++ + Sbjct: 87 VVQSSDARIPNLLTDKVDISCQFITVTASR--AQQVAFTLPYYREGVALLLPANSKYKEI 144 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L A V + + K ++ V+ + A + R D D S+ Sbjct: 145 DDLKAAGDGVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLMYQAINSGRADTAATDQSS 204 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT-HYAMVTAE 252 + L + N P + S A A+ +GD +W N V+ H AM E Sbjct: 205 VKYLMVQN--PGRYRSPAFAWSPQTYACAVKRGDQDWLNFVNTALHEAMTGVE 255 >gi|289627186|ref|ZP_06460140.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289648680|ref|ZP_06480023.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. aesculi str. 2250] gi|330868023|gb|EGH02732.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 283 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 55/239 (23%), Positives = 100/239 (41%), Gaps = 17/239 (7%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + S L + KRG L G + + A+G +GFD+D R ++ +F+DPSK+++ Sbjct: 27 AAEGSKLDAVLKRGNLVVGTGSTNAPWHFQGADGKLQGFDIDIGRIIAKGLFNDPSKVEF 86 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + ++ R L + ++DI + T R + +AF Y +G ++ + Sbjct: 87 VVQSSDARIPNLLTDKVDISCQFITVTASR--AQQVAFTLPYYREGVALLLPANSKYKEI 144 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA------AYRAHRCDAY 194 L AG + + A + + + +V++ D+ A + R D Sbjct: 145 DDLKA------AGDGVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLMYQAINSGRADTA 198 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT-HYAMVTAE 252 D S++ L + N P + S A A+ +GD +W N V+ H AM E Sbjct: 199 ATDQSSVKYLMVQN--PGRYRSPAFAWSPQTYACAVKRGDQDWLNFVNTALHEAMTGVE 255 >gi|126659454|ref|ZP_01730588.1| hypothetical protein CY0110_20820 [Cyanothece sp. CCY0110] gi|126619290|gb|EAZ90025.1| hypothetical protein CY0110_20820 [Cyanothece sp. CCY0110] Length = 299 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 61/255 (23%), Positives = 112/255 (43%), Gaps = 22/255 (8%) Query: 21 STNAS----ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FD 73 S NAS IL IK+ G + G + FA + G+W G+ +D + I Sbjct: 18 SQNASWAGEILEKIKETGVITAGTRKDAIPFAYINDEGEWVGYSIDVLEIIRQDIEKKLG 77 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 P +++ + + + RF +++++IDI ++ +T RE + + ++YF G + + Sbjct: 78 KPIQLKLVEVTPQNRFDKVKNREIDIECASSTFTWEREEMVDFS---VSYF-ASGTKIFR 133 Query: 134 KKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191 KKG + ++ L+G I V TT E + A + E +E+++ Sbjct: 134 KKGSDLGTIDSLAGRRIGVIPNTTNEQAIKIQQPAAILVPIKDRNEGLEKLNNG----EI 189 Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDI-ISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 +A GD L L+L N + ++P+ A I + ++ W +V +Y++V Sbjct: 190 EAIAGDGIVLQGLRLENGNADKFEVVPEFPYMYEAYACMIPEDESAWRGMV---NYSLVK 246 Query: 251 AEELGITQKNINQVS 265 E GI QV Sbjct: 247 FME-GIVSDQPQQVQ 260 >gi|320324045|gb|EFW80128.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. glycinea str. B076] gi|320329010|gb|EFW85009.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330880666|gb|EGH14815.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 283 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 54/233 (23%), Positives = 96/233 (41%), Gaps = 5/233 (2%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + S L + KRG L G + + A+G +GFD+D R ++ +F+DPSK+++ Sbjct: 27 AAEGSKLDAVLKRGNLVVGTGSTNAPWHFQGADGKLQGFDIDIGRIIAEGLFNDPSKVEF 86 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + ++ R L + ++DI + T R + +AF Y +G ++ + Sbjct: 87 VVQSSDARIPNLLTDKVDISCQFITVTASR--AQQVAFTLPYYREGVALLLPANSKYKEI 144 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L A V + + K ++ V+ + A + R D D S+ Sbjct: 145 DDLKAAGDGVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLMYQAINSGRADTAATDQSS 204 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT-HYAMVTAE 252 + L + N P + S A A+ +GD +W N V+ H AM E Sbjct: 205 VKYLMVQN--PGRYRSPAFAWSPQTYACAVKRGDQDWLNFVNTALHEAMTGVE 255 >gi|28869961|ref|NP_792580.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213967002|ref|ZP_03395152.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato T1] gi|301385186|ref|ZP_07233604.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato Max13] gi|302062754|ref|ZP_07254295.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato K40] gi|302130127|ref|ZP_07256117.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28853206|gb|AAO56275.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213928324|gb|EEB61869.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato T1] gi|330965316|gb|EGH65576.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. actinidiae str. M302091] gi|331014305|gb|EGH94361.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 283 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 54/233 (23%), Positives = 96/233 (41%), Gaps = 5/233 (2%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + S L + KRG L G + + A+G +GFD+D R ++ +F+DPSK+++ Sbjct: 27 AAEGSKLDAVLKRGNLVVGTGSTNAPWHFQGADGKLQGFDIDIGRIIAKGLFNDPSKVEF 86 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + ++ R L + ++DI + T R + +AF Y +G ++ + Sbjct: 87 VVQSSDARIPNLLTDKVDISCQFITVTASR--AQQVAFTLPYYREGVALLLPANSKYKEI 144 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L A V + + K ++ V+ + A + R D D S+ Sbjct: 145 DDLKAAGDGVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLMYQAINSGRADTAATDQSS 204 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT-HYAMVTAE 252 + L + N P + S A A+ +GD +W N V+ H AM E Sbjct: 205 VKYLMVQN--PGRYRSPAFAWSPQTYACAVKRGDQDWLNFVNTALHEAMTGVE 255 >gi|258405418|ref|YP_003198160.1| extracellular solute-binding protein family 3 [Desulfohalobium retbaense DSM 5692] gi|257797645|gb|ACV68582.1| extracellular solute-binding protein family 3 [Desulfohalobium retbaense DSM 5692] Length = 263 Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 63/269 (23%), Positives = 112/269 (41%), Gaps = 16/269 (5%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 FVS L + + T F+ + S ++K+G L G++ K +G GFDVD Sbjct: 6 LFVSALLCLCVAATGFAGDGS-WERVQKKGELVIGLDDTFAPMGFRKDDGTLVGFDVDAA 64 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 AL + D I + P +L +K+ D + T+ E + + F Sbjct: 65 EALGERLGID---IAWQPTAWDGVIHSLNAKKFDCIWNGM--TITEERAAKVDFTEPYIM 119 Query: 125 DGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKA-HNMKYHPIVFERVEEI 182 DGQ ++ + ++ + L G ++ VQ G++ + D KA +K +P + ++ Sbjct: 120 DGQIVVVQFENDAVTDFADLGGTTVGVQKGSSAVEAVEDLPKAPETVKEYPSNNNALLDL 179 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 +A A +++ YA+ RP +LP ++K P A + D V Sbjct: 180 EAGRLAA---VIVDNVAGRYAIAT---RPGTFKVLPGFVTKEPFGIAFRKADDSLRMKVQ 233 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNP 271 AMV E+ + + + +D TNP Sbjct: 234 QALDAMV--EDGTLAEISRKWFGEDITNP 260 >gi|150376683|ref|YP_001313279.1| extracellular solute-binding protein [Sinorhizobium medicae WSM419] gi|150031230|gb|ABR63346.1| extracellular solute-binding protein family 3 [Sinorhizobium medicae WSM419] Length = 280 Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 59/254 (23%), Positives = 102/254 (40%), Gaps = 11/254 (4%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 +S L ++ RG L G + + A +GFDVD R ++ A+F DP KI+++ Sbjct: 27 SSKLDEVLSRGHLILGTGSTNAPWHFKSAEDKLQGFDVDMGRIIAKALFGDPEKIEFVNQ 86 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 ++ R + + ++DI + T+ E + +AF Y +G G ++ L Sbjct: 87 SSDARIPNITTGKVDITCQFM--TVTGERAQQVAFTIPYYREGVGLMLKADGKYGDYEAL 144 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 A V + D A + +E V+ I A + R DA D S+L Sbjct: 145 KAAGSSVTISVLQNVYAEDMVHAALPEAAVDQYESVDLIYQALESGRADAAATDQSSLAW 204 Query: 204 LKLTND---RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 N + + + P A + +GD +W N V+ + +T E K+ Sbjct: 205 YMTQNSGRYKDAGYGWNPQT-----YACGVRRGDQDWLNFVNTALHEAMTGVEFDFYAKS 259 Query: 261 INQ-VSKDTTNPDV 273 KD T P++ Sbjct: 260 FKTWFGKDLTPPEI 273 >gi|257487796|ref|ZP_05641837.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331008517|gb|EGH88573.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 283 Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 55/239 (23%), Positives = 100/239 (41%), Gaps = 17/239 (7%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + S L + KRG L G + + A+G +GFD+D R ++ +F+DPSK+++ Sbjct: 27 AAEGSKLDAVLKRGNLVVGTGSTNAPWHFQGADGKLQGFDIDIGRIIAKGLFNDPSKVEF 86 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + ++ R L + ++DI + T R + +AF Y +G ++ + Sbjct: 87 VVQSSDARIPNLLTDKVDISCQFITVTASR--AQQVAFTLPYYREGVALLLPANSKYKEI 144 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA------AYRAHRCDAY 194 L AG + + A + + + +V++ D+ A + R D Sbjct: 145 DDLKA------AGDGVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLMYQAINSGRADTA 198 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT-HYAMVTAE 252 D S++ L + N P + S A A+ +GD +W N V+ H AM E Sbjct: 199 ATDQSSVKYLMVQN--PGRYRSPAFAWSPQTYACAVKRGDQDWLNFVNTALHEAMTGVE 255 >gi|71733635|ref|YP_274850.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|298487226|ref|ZP_07005275.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|71554188|gb|AAZ33399.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|298158250|gb|EFH99321.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330985341|gb|EGH83444.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. lachrymans str. M301315] Length = 283 Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 54/233 (23%), Positives = 96/233 (41%), Gaps = 5/233 (2%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + S L + KRG L G + + A+G +GFD+D R ++ +F+DPSK+++ Sbjct: 27 AAEGSKLDAVLKRGNLVVGTGSTNAPWHFQGADGKLQGFDIDIGRIIAKGLFNDPSKVEF 86 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + ++ R L + ++DI + T R + +AF Y +G ++ + Sbjct: 87 VVQSSDARIPNLLTDKVDISCQFITVTASR--AQQVAFTLPYYREGVALLLPANSKYKEI 144 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L A V + + K ++ V+ + A + R D D S+ Sbjct: 145 DDLKAAGDGVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLMYQAINSGRADTAATDQSS 204 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT-HYAMVTAE 252 + L + N P + S A A+ +GD +W N V+ H AM E Sbjct: 205 VKYLMVQN--PGRYRSPAFAWSPQTYACAVKRGDQDWLNFVNTALHEAMTGVE 255 >gi|330432864|gb|AEC17923.1| cystine transporter subunit [Gallibacterium anatis UMN179] Length = 280 Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 13/232 (5%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L I++ G ++ G+ + F V G +GFDV+ + ++ + D +K +++ + Sbjct: 34 SQLAQIQEAGKVRIGVFSDKPPFGYVDGQGKSQGFDVEIGKEIAKDLVGDENKAEFVLVE 93 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 A R L S ++DI+ N T R+ + A P G + + I+ + QL+ Sbjct: 94 AANRAEYLLSNKVDIILANFTVTPARKEVVDFA-NPYMKV-ALGVVSKEGSVITDIQQLT 151 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 ++ V GTT + +F + + FE+ E A + R DA D + L+A Sbjct: 152 DKTLLVNKGTTADA----FFTKNYPNIKLLKFEQNTETFDALKDGRGDALAHDNTLLFAW 207 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTE---WYN--IVSWTHYAMVTA 251 N P V + + + +APA+ + E W N IV T + A Sbjct: 208 AKNN--PGYTVGVRSLGEQEFIAPAVQKNQPELLKWLNDEIVKLTKEGKIKA 257 >gi|16264462|ref|NP_437254.1| putative amino acid uptake ABC transporter periplasmic solute-binding protein precursor [Sinorhizobium meliloti 1021] gi|307306767|ref|ZP_07586508.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti BL225C] gi|15140599|emb|CAC49114.1| ABC transporter, periplasmic solute-binding protein [Sinorhizobium meliloti 1021] gi|306902058|gb|EFN32656.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti BL225C] Length = 280 Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 59/254 (23%), Positives = 102/254 (40%), Gaps = 11/254 (4%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 +S L ++ RG L G + + A +GFDVD R ++ A+F DP KI+++ Sbjct: 27 SSKLDEVLSRGHLILGTGSTNAPWHFKSAEDKLQGFDVDMGRIIAKALFGDPEKIEFVNQ 86 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 ++ R + + ++DI + T+ E + +AF Y +G G ++ + L Sbjct: 87 SSDARIPNITTGKVDITCQFM--TVTGERAQQIAFTIPYYREGVGLMLKADGKYADYEAL 144 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 A V + D A + +E V+ I A + R DA D S+L Sbjct: 145 KAAGSSVTISVLQNVYAEDMVHAALPEATVDQYESVDLIYQALESGRADAAATDQSSLAW 204 Query: 204 LKLTND---RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 N + + + P A + +GD +W N V+ + +T E K+ Sbjct: 205 YMTQNSGRYKDAGYGWNPQT-----YACGVRRGDQDWLNFVNTALHEAMTGVEFDFYAKS 259 Query: 261 INQ-VSKDTTNPDV 273 KD T P + Sbjct: 260 FKTWFGKDLTPPHI 273 >gi|78356430|ref|YP_387879.1| extracellular solute-binding protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78218835|gb|ABB38184.1| amino acid ABC transporter substrate-binding protein, PAAT family [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 271 Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 58/252 (23%), Positives = 106/252 (42%), Gaps = 28/252 (11%) Query: 6 FVSILCLIILFFTSFSTNA--------SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 FV L L+++ + A S+L DI KRG L+ G + G F +G++ Sbjct: 3 FVKALVLLLVTVMAVPAFAGDIDLAKKSVLNDILKRGELRVGFDAGYPPFEMTDKSGNFV 62 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL--ALQSKQIDILSRNTDWTLLREISLG 115 GFD+D + L+ ++ ++++P+N + +L S + D++ T R + +G Sbjct: 63 GFDIDLGKELAKSM-----GVKFVPVNTDFDGMIPSLLSGKFDVIISGMTLTQERNMKIG 117 Query: 116 LAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICV--QAGTTTELTLADYFKAHNMKYH 172 + P + K KG + S L+ V + GTT E Y K Sbjct: 118 FS-EPYLVMGQTVLVAAKHKGTVKSYKDLNDPKFIVVSRMGTTGEEATKKYLPKATYK-- 174 Query: 173 PIVFERVEEIDAAYRA--HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 F++ E+D A R DA+ D+ + + + +L + + P+A Sbjct: 175 --SFDK--EVDCAMEVVNGRADAFVYDLPVNEVFQAQQGKDKTY-LLNEPFTFEPMAVGY 229 Query: 231 IQGDTEWYNIVS 242 QGD ++ N ++ Sbjct: 230 KQGDPDFANFIN 241 >gi|330941851|gb|EGH44588.1| extracellular solute-binding protein [Pseudomonas syringae pv. pisi str. 1704B] Length = 283 Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 57/246 (23%), Positives = 103/246 (41%), Gaps = 17/246 (6%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 +L T + S L + KRG L G + + A+G +GFD+D R ++ +F+ Sbjct: 20 MLANTVQAAEGSKLDAVLKRGNLVVGTGSTNAPWHFQGADGKLQGFDIDIGRIIAKGLFN 79 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 DPSK++++ ++ R L + ++DI + T R + +AF Y +G ++ Sbjct: 80 DPSKVEFVVQSSDARIPNLLTDKVDISCQFITVTASR--AQQVAFTLPYYREGVALLLPV 137 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA------AYR 187 + L AG + + A + + + +V++ D+ A Sbjct: 138 NSKYKEIDDLKA------AGDDVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLMYQAIN 191 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT-HY 246 + R D D S++ L + N P + S A A+ +GD +W N V+ H Sbjct: 192 SGRADTAATDQSSVKYLMVQN--PGRYRSPAFAWSPQTYACAVKRGDQDWLNFVNTALHE 249 Query: 247 AMVTAE 252 AM E Sbjct: 250 AMTGVE 255 >gi|33595038|ref|NP_882681.1| extracellular solute-binding protein [Bordetella parapertussis 12822] gi|33599318|ref|NP_886878.1| extracellular solute-binding protein [Bordetella bronchiseptica RB50] gi|33565114|emb|CAE40067.1| probable extracellular solute-binding protein [Bordetella parapertussis] gi|33575364|emb|CAE30827.1| probable extracellular solute-binding protein [Bordetella bronchiseptica RB50] Length = 304 Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 50/222 (22%), Positives = 90/222 (40%), Gaps = 6/222 (2%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR----ALSSAIFDDPSKIQYLP 82 L I G + G + F+ AN G+ +D C A+ + I D +++YLP Sbjct: 31 LKKISDTGVITIGHRETSIPFSYYDANQKPVGYSIDICTRIVDAVKTRIKRDDIQVKYLP 90 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + + R + + ID+ +T TL R+ + AF T+ G FI K + ++ Sbjct: 91 VTSATRIPLMGNGTIDLECASTSNTLDRQKQV--AFSVTTFVTGNRFISLKSANLKTIDD 148 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G ++ +GT + +A ++ + + E R A+ D LY Sbjct: 149 LKGKTVASTSGTANIRQANEINEARSLGMKVVPVKEHAEGFLMVETGRAAAFIMDDILLY 208 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 L P + + D +S P A + + D ++ +V T Sbjct: 209 GLAANAKEPDRYQVSGDSLSIEPYAIMLRRDDPQFKALVDDT 250 >gi|295096060|emb|CBK85150.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 276 Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 62/244 (25%), Positives = 100/244 (40%), Gaps = 14/244 (5%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDP 75 S A L DIK G +K F + A + G+DVDF +AL+ ++ Sbjct: 23 LVSAQAQADRLADIKAAGVVKVATFDANPPFGSIDAKTHEIVGYDVDFAKALAKSLG--- 79 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 K++ + N R LQS + D++ D T+ E + + F + GQ F++ K Sbjct: 80 VKLELVATNPANRIPLLQSGKADLIV--ADITITPERAQVIDFSTPYFVTGQQFLVPAKS 137 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 + S A I GTT E L F + + ++ + A R A T Sbjct: 138 P-DKLDDYSRARIGAVKGTTGEQALHQRFPQSRV----LSYDDIPLALTALRNGNVQAIT 192 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D + L L ++ ILPD++SK + + +G+T V + +VT E+ G Sbjct: 193 QDSTILAGLLAQAPDKADFKILPDLLSKEEIGVGVKKGETALLRAV---NDELVTLEKNG 249 Query: 256 ITQK 259 K Sbjct: 250 QAAK 253 >gi|260102758|ref|ZP_05752995.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus helveticus DSM 20075] gi|260083428|gb|EEW67548.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus helveticus DSM 20075] Length = 272 Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 59/243 (24%), Positives = 104/243 (42%), Gaps = 18/243 (7%) Query: 1 MYKDFFVSILCLIILFFT----SFSTNASILGDIKKRGFLKCGI--NTGLVGFAEVKANG 54 M K FF+S L + I FT S + ++ +K + G+ +T L G +K G Sbjct: 1 MKKRFFLSTLLIGIALFTLSACSQNKKQNVYQTVKSTKTINWGVKADTPLFGSMNIKT-G 59 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 GF++D +AL+ + +K ++ A + L+++ +D + T RE + Sbjct: 60 KINGFEIDLAKALTKEMLGKNAKANFVTTTANTKIQLLKNRNVDAVIAAMTITPEREKQV 119 Query: 115 GLAFRPITYFD-GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + +P YF GQ ++ K I +V L+ + V GTT AD K K Sbjct: 120 DFS-KP--YFPAGQSIMVAKNNKIKNVKDLNNKKVLVVKGTTA----ADAVKKFAPKAEI 172 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + F+ + A +A + DA+ D L + S + ++ + P A+ +G Sbjct: 173 LQFDDYGQAFTALKAGQGDAFVTDNGILVGIL---RDSSGYKLVGGNFTNQPYGIAVNKG 229 Query: 234 DTE 236 TE Sbjct: 230 QTE 232 >gi|171060694|ref|YP_001793043.1| extracellular solute-binding protein [Leptothrix cholodnii SP-6] gi|170778139|gb|ACB36278.1| extracellular solute-binding protein family 3 [Leptothrix cholodnii SP-6] Length = 298 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 49/246 (19%), Positives = 107/246 (43%), Gaps = 6/246 (2%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC-RALSSA-- 70 ++ + + L IK + G+ + +G + G+ V+ C RAL+ Sbjct: 11 LMAMGAAQAQSDTLKKIKDSASVTMGVRESSGALSLTLGDGKYVGYHVELCQRALADVQK 70 Query: 71 IFDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 + P I+Y + ++ R +Q+ +DI +T R+ + +F TY + Sbjct: 71 LLGLPKLDIKYQAVTSQNRIPLVQNGTVDIECGSTTNNAARQKDV--SFAVTTYVEEVRI 128 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 + GI+S++QL G S+ GTT+ L + +A+ + ++ + + + + Sbjct: 129 AVKGSSGITSIAQLGGKSVATTTGTTSVQLLRKHERANGVNFNEVFGKDHADSFLLLESG 188 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 R DA+ D L + P++ I+ +++S P+A + + D + + + AM+ Sbjct: 189 RADAFVMDGQILAGNIAKSKAPADFKIVGEVLSVEPIAIMMRKDDPAFKKAIDASLTAMM 248 Query: 250 TAEELG 255 + E+ Sbjct: 249 KSGEIA 254 >gi|121602735|ref|YP_988960.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Bartonella bacilliformis KC583] gi|121602769|ref|YP_988990.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Bartonella bacilliformis KC583] gi|120614912|gb|ABM45513.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Bartonella bacilliformis KC583] gi|120614946|gb|ABM45547.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Bartonella bacilliformis KC583] Length = 302 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 59/231 (25%), Positives = 96/231 (41%), Gaps = 7/231 (3%) Query: 1 MYKDFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M + V I II S + L IK+ G + G+ G A NG + GF Sbjct: 1 MRRSLSVLITTAIIGLIVSVAHAQNDTLERIKQTGRITLGVRES-SGLAYALGNGRYTGF 59 Query: 60 DVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 + + + I P +I+YLP+ ++ R LQ+ D +T R S+ Sbjct: 60 HTEMAENIINDISKKIGKPIRIRYLPITSQNRIPLLQNNTYDFECGSTTNDTARGRSVAF 119 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 A+ TY + + K GI S+ L+G +I GTT + +A N+ + I Sbjct: 120 AY--TTYVEEVRIAVKKDSGIKSIQDLNGKTIATTTGTTAVQLIRQNGRAKNINFRVING 177 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 + + R DA+ D S L + PS+++IL ++S P+A Sbjct: 178 RDHADSFLLLESGRADAFIMDSSILAGSISRSRNPSDYMILDAVLSVEPIA 228 >gi|159184745|ref|NP_354406.2| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|159140033|gb|AAK87191.2| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 267 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 54/198 (27%), Positives = 82/198 (41%), Gaps = 8/198 (4%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 FT FS NA + DI KRG +K G+ G F V A G+ G+D D + + + Sbjct: 21 FTGFSANAQSVDDIVKRGSVKIGVLVGAPPFGSVDAQGNPVGYDADVATLIGKYLGVPVT 80 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 +Q P R AL+S ++D L T R ++ + P + F G HK Sbjct: 81 MVQLTP---PSRIPALESGKVDFLVATLAPTPERAKAV-MFTNPYSAFQ-VGIYSHKDTK 135 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 I L G ++ V G++ E + K + + F+ A + + A G Sbjct: 136 IEKWEDLKGMTVGVNRGSSVEREFVNREKELGLTI--LRFDDDATTMQALFSGQVQAIAG 193 Query: 197 -DISALYALKLTNDRPSE 213 D A A+KL D +E Sbjct: 194 PDAQANAAIKLRGDTTTE 211 >gi|154247956|ref|YP_001418914.1| extracellular solute-binding protein [Xanthobacter autotrophicus Py2] gi|154162041|gb|ABS69257.1| extracellular solute-binding protein family 3 [Xanthobacter autotrophicus Py2] Length = 296 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 61/118 (51%), Gaps = 7/118 (5%) Query: 47 FAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQYLPLNAKERFLALQSKQIDILSR 102 ++ ANG G+ VD CR ++ + P+ K+ Y+ + A++RF A++ +IDIL Sbjct: 60 YSYAAANGQPSGYIVDLCREVADGVKRTLKLPAIKVDYVKVTAEDRFEAVRDGRIDILCE 119 Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 + T+ R + + T+ DG G ++ + + + L G + V GTTTE TL Sbjct: 120 PSSMTMSRRALVDFSL--PTFLDGAG-VVTRGAPVKGLEDLKGKKVGVLRGTTTEETL 174 >gi|227113607|ref|ZP_03827263.1| putative amino acid ABC transporter, substrate binding protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 268 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 10/173 (5%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K ++++ +L + S A L DI+KRG L+ + F V + +G+D+D Sbjct: 9 KKGLLAVMGAAMLLIQAGSAMADQLQDIEKRGVLRVAVPQDFPPFGSVGTDLQPQGYDID 68 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE--ISLGLAFRP 120 R L+ + K+Q +P+ + R LQ+ ++D++ + RE I A+ P Sbjct: 69 IARYLAKEM---KLKLQLVPVTSANRVPYLQTNKVDLVISSLGKNAEREKVIDFSRAYAP 125 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF-KAHNMKYH 172 +F G K ++S L G SI V G ++ L D KA +K + Sbjct: 126 --FF--LGVFGPKDSTLTSSEALEGKSIGVTRGAVEDMVLTDIAPKAAQIKRY 174 >gi|157693147|ref|YP_001487609.1| glutamine ABC transporter binding protein [Bacillus pumilus SAFR-032] gi|157681905|gb|ABV63049.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Bacillus pumilus SAFR-032] Length = 269 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 42/192 (21%), Positives = 86/192 (44%), Gaps = 10/192 (5%) Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 ++GD +GFD+D +A++ I D K ++ + +K R LQ + DI + T+ E Sbjct: 65 SSGDIEGFDIDIAKAIAKEILGDEGKAEFKEVTSKTRIPLLQ--KGDIHAIVATMTITEE 122 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMK 170 + F + + GQ ++ K I S+ L G + G+T+ + + ++ Sbjct: 123 RKKEVNFSDVYFEAGQSLLVKKGSDIQSIDDLKKGTKVLAVKGSTSSQNIREKAPEASV- 181 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 + FE +E A ++++ T D + L+ + D S + ++ + P A+ Sbjct: 182 ---LEFENYQEAFTALKSNQGQVLTTDNAILFGMA---DEDSNYEVVGGTFTDEPYGIAV 235 Query: 231 IQGDTEWYNIVS 242 +GD E ++ Sbjct: 236 KKGDKELTTAIN 247 >gi|325062714|gb|ADY66404.1| amino acid ABC transporter, substrate binding protein [Agrobacterium sp. H13-3] Length = 297 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 53/228 (23%), Positives = 92/228 (40%), Gaps = 17/228 (7%) Query: 7 VSILCLIILFFTSFSTNASI--------LGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 +S+ CL F T F A + L I K ++ G F+ +G+ G Sbjct: 3 ISVFCL---FLTCFIPTAPVQAAGEGDTLRQIAKTAKIRIGYREAEPPFSYQLPDGEVTG 59 Query: 59 FDVDFCRALSSAIFD----DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 F D CRA+S I D I+Y+ RF+ ++S +IDI T R + Sbjct: 60 FSTDLCRAISEDIRTQLKLDKLDIEYVKATPATRFILVRSGKIDIECAATTNNSERRKMV 119 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 ++ + F+ K+ + S++ L+G S+ +GT L + N+ + Sbjct: 120 DFSYP--NFMTATQFLSRKQDNLKSLADLAGRSVTSASGTVNIEQLNAVNREKNLNISVM 177 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222 + EE A + A+ D L AL T++ P + + + +S Sbjct: 178 PTKTNEEAFELVVAGKASAFVMDGILLAALAATSENPDLYALSDETLS 225 >gi|307329669|ref|ZP_07608827.1| extracellular solute-binding protein family 3 [Streptomyces violaceusniger Tu 4113] gi|306884727|gb|EFN15755.1| extracellular solute-binding protein family 3 [Streptomyces violaceusniger Tu 4113] Length = 307 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 43/145 (29%), Positives = 68/145 (46%), Gaps = 7/145 (4%) Query: 31 KKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 + RG L G+ E A G + GFD++ R +S+++ P I++ + + R Sbjct: 63 EHRGHLTVGVKEDQPYLGERDPATGRYSGFDIEIARMMSASLGFAPKTIRFQTIASANRE 122 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYF-DGQGFIMHKKKG-ISSVSQLSGAS 147 ALQS QID LR+ +G A YF GQ ++ + I + L+G + Sbjct: 123 TALQSGQIDYYVGTYTINPLRKRLVGFAG---PYFMAGQSLLVRTDENDIHGPADLAGRT 179 Query: 148 ICVQAGTTT-ELTLADYFKAHNMKY 171 +C AG+T + DY KAH + Y Sbjct: 180 VCSVAGSTPLQRIQTDYPKAHAVAY 204 >gi|168492861|ref|ZP_02717004.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus pneumoniae CDC3059-06] gi|183576884|gb|EDT97412.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus pneumoniae CDC3059-06] Length = 286 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 23/228 (10%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + A + + KK G L+ + F V +G ++G+D++ L+ D K++Y Sbjct: 37 TAKARTIDENKKSGELRIAVFGDKKPFGYVDNDGSYQGYDIELGNQLAQ---DLGVKVKY 93 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKKGIS 138 + ++A R L S ++DI N T R ++ L + ++ G + K I+ Sbjct: 94 ISVDAANRAEYLISNKVDITLANFTVTDERKKQVDFALPYMKVSL----GVVSPKTGLIT 149 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP-IVFERVEEIDAAYRA---HRCDAY 194 V QL G ++ V GTT E YF+ K HP I ++ ++ +Y+A R DA+ Sbjct: 150 DVKQLEGKTLIVTKGTTAET----YFE----KNHPEIKLQKYDQYSDSYQALLDGRGDAF 201 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + D + + A L N V + + +A A+ +G+ E + ++ Sbjct: 202 STDNTEVLAWALEN--KGFEVGITSLGDPDTIAAAVQKGNQELLDFIN 247 >gi|311108047|ref|YP_003980900.1| extracellular solute-binding protein, family 3 family protein 8 [Achromobacter xylosoxidans A8] gi|310762736|gb|ADP18185.1| bacterial extracellular solute-binding protein, family 3 family protein 8 [Achromobacter xylosoxidans A8] Length = 261 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 54/226 (23%), Positives = 100/226 (44%), Gaps = 17/226 (7%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L D+ G L+ G+ + A G+ G D+D + +++ D K++ + + Sbjct: 27 LQDVLGAGKLRVGVLMDAAPWGFKDAKGEAAGLDIDLAKLMAA---DMGVKLELVQVTGA 83 Query: 87 ERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 R +L + ++D+L T R ++ + + G M + K SV +L Sbjct: 84 SRIPSLLAGKVDVLIAAAGATPERAQQVMFSQPYAAVNLGVYGGDAMPQAK---SVDELK 140 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G SI V G+T ++ L D + + FE AAY A + +++ + + AL Sbjct: 141 GHSIAVAKGSTLDIWLTDNAPGAKL----VRFEDTPSAVAAYLAGQSESFAENSA--IAL 194 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 K+T D P+ L +I +SP A+ QG N+++W + + T Sbjct: 195 KVTEDNPARAPQLKFLIRQSPAHAAVQQGQ---QNLLNWINTFLFT 237 >gi|148985280|ref|ZP_01818503.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus pneumoniae SP3-BS71] gi|147922478|gb|EDK73597.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus pneumoniae SP3-BS71] gi|301799733|emb|CBW32298.1| putative periplasmic solute-binding transport protein [Streptococcus pneumoniae OXC141] Length = 288 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 23/228 (10%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + A + + KK G L+ + F V +G ++G+D++ L+ D K++Y Sbjct: 37 TAKARTIDENKKSGELRIAVFGDKKPFGYVDNDGSYQGYDIELGNQLAQ---DLGVKVKY 93 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKKGIS 138 + ++A R L S ++DI N T R ++ L + ++ G + K I+ Sbjct: 94 ISVDAANRAEYLISNKVDITLANFTVTDERKKQVDFALPYMKVSL----GVVSPKTGLIT 149 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP-IVFERVEEIDAAYRA---HRCDAY 194 V QL G ++ V GTT E YF+ K HP I ++ ++ +Y+A R DA+ Sbjct: 150 DVKQLEGKTLIVTKGTTAET----YFE----KNHPEIKLQKYDQYSDSYQALLDGRGDAF 201 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + D + + A L N V + + +A A+ +G+ E + ++ Sbjct: 202 STDNTEVLAWALEN--KGFEVGITSLGDPDTIAAAVQKGNQELLDFIN 247 >gi|186475671|ref|YP_001857141.1| extracellular solute-binding protein [Burkholderia phymatum STM815] gi|184192130|gb|ACC70095.1| extracellular solute-binding protein family 3 [Burkholderia phymatum STM815] Length = 304 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 53/235 (22%), Positives = 94/235 (40%), Gaps = 15/235 (6%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK--------I 78 L I G + G+ + F+ NGD + + ++++ AI DD K + Sbjct: 36 LKKIHDDGVITLGVREASIPFSYF--NGDRT---IGYSQSIALAIVDDIKKTLAMPDLRV 90 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + +P+ + RF+ L + QID+ +T T RE + Y I K GI+ Sbjct: 91 REVPITSANRFMMLANNQIDLECGSTTHTRERESVAAFSNSFFQY--AVRMIARKNAGIT 148 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 L+G + AGT+ E + + + + AA +A R A+ D Sbjct: 149 DFPDLAGKPVVTTAGTSDERLVRQLNSEKQLNMRIASAKDHADAFAAVKADRAVAFVMDE 208 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 LY + T+ RP + ++ + A +GD + +V+ M T+ E Sbjct: 209 PILYGFRATDPRPDDFIVTGTPLGYETYACMFRKGDAPFRELVNRVISKMQTSGE 263 >gi|189310258|emb|CAP64356.1| probable extracellular solute-binding protein [Bordetella bronchiseptica 253] Length = 304 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 50/222 (22%), Positives = 89/222 (40%), Gaps = 6/222 (2%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR----ALSSAIFDDPSKIQYLP 82 L I G + G + F+ AN G+ +D C A+ + I D +++YLP Sbjct: 31 LKKISDTGVITIGHRETSIPFSYYDANQKPVGYSIDICARIVDAVKARIKRDDIQVKYLP 90 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + + R + + ID+ +T TL R+ + AF T+ G FI K + ++ Sbjct: 91 VTSATRIPLMGNGTIDLECASTSNTLDRQKQV--AFSVTTFVTGNRFISLKSANLKTIDD 148 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G ++ +GT + +A + + + E R A+ D LY Sbjct: 149 LKGKTVVSTSGTANIRQANEINEARGLGMKVVPVKEHAEGFLMVETGRAAAFIMDDILLY 208 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 L P + + D +S P A + + D ++ +V T Sbjct: 209 GLAANAKEPDRYQVSGDSLSIEPYAIMLRRDDPQFKALVDDT 250 >gi|91789746|ref|YP_550698.1| extracellular solute-binding protein [Polaromonas sp. JS666] gi|91698971|gb|ABE45800.1| amino acid ABC transporter substrate-binding protein, PAAT family [Polaromonas sp. JS666] Length = 298 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 50/232 (21%), Positives = 105/232 (45%), Gaps = 6/232 (2%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK---IQYLPL 83 + +K G + G+ G + +G + G+ VD C+ + + + K ++YLP+ Sbjct: 26 IAKVKASGVVTMGVRDS-SGLSFTLGDGKYAGYHVDVCQRILARLEKTVGKKLEVKYLPV 84 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 ++ R +Q+ +DI +T R+ + AF T+ + + GI+S++QL Sbjct: 85 TSQNRIPLVQNGTVDIECGSTTNNATRQKDV--AFAVTTFVEEVRIAVKADSGITSIAQL 142 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 +G S+ GTT+ TL +A + + + + + + R DA+ D S L + Sbjct: 143 NGKSVATTTGTTSVQTLRKNERATGIDFKEVFGKDHSDSFLLLESGRADAFVMDGSILAS 202 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + P+ I+ +++S P+A + + D + + T ++ + EL Sbjct: 203 NIANSKNPAGFKIVGEVLSVEPIAIMMRKDDPAFKKLSDDTIKDLIKSGELA 254 >gi|257057662|ref|YP_003135494.1| periplasmic component of amino acid ABC-type transporter/signal transduction system [Saccharomonospora viridis DSM 43017] gi|256587534|gb|ACU98667.1| periplasmic component of amino acid ABC-type transporter/signal transduction system [Saccharomonospora viridis DSM 43017] Length = 324 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 46/195 (23%), Positives = 85/195 (43%), Gaps = 10/195 (5%) Query: 24 ASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 S + IK+RG L G+ NT L GF + + G GFD+D R ++ A+ + + + Sbjct: 79 GSTMAKIKERGHLIVGVDQNTYLFGFPDPE-TGKLSGFDIDIARKIAEALLGNADAVHFK 137 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 +++ ER AL++ +DI+ R T R + F + Y GQ ++ +S Sbjct: 138 AISSAERIDALRNGDVDIVVRTFSITCDRLEDIN--FSTVYYVAGQRVLVPVGSTARGLS 195 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L +C +T+ +A A + P+ + + + + DA + D + L Sbjct: 196 DLGDKRVCAAKDSTSLRNIA----ASRPRPIPVAVDDWSDCLVLLQQGQVDAISTDDTIL 251 Query: 202 YALKLTNDRPSEHVI 216 L+ DR ++ Sbjct: 252 AGLR-AQDRTGTKIV 265 >gi|295693349|ref|YP_003601959.1| amino acid ABC transporter, amino acid-binding protein [Lactobacillus crispatus ST1] gi|295031455|emb|CBL50934.1| Amino acid ABC transporter, amino acid-binding protein [Lactobacillus crispatus ST1] Length = 289 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 79/181 (43%), Gaps = 10/181 (5%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 N + + IK+RG+L+ + L + V + G G+DV R ++ + P IQ Sbjct: 43 NENNVSSIKRRGYLRVAVFGDLPPYGWVNSQGKRVGYDVRLARRVAKDLGVKPKFIQ--- 99 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 +NA R L S + DI+ N T R+ S+ +P G I K I+S Q Sbjct: 100 VNANNRIDTLNSNKADIVLANFTLTPERK-SVASWTKPYMKVS-VGVISPKSAPITSPKQ 157 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G S+ V GTT E +YF + + F+ + A + R A D S LY Sbjct: 158 LKGKSVIVTKGTTAE----NYFTKQK-GVNLLKFDSKTQQFNAIKNGRGAALADDNSYLY 212 Query: 203 A 203 A Sbjct: 213 A 213 >gi|329122022|ref|ZP_08250631.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Dialister micraerophilus DSM 19965] gi|327467074|gb|EGF12586.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Dialister micraerophilus DSM 19965] Length = 265 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 54/212 (25%), Positives = 91/212 (42%), Gaps = 16/212 (7%) Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 NG+ GFDVD +A+S I +I++ P++ + L S +ID + T RE Sbjct: 57 NGNIVGFDVDIAKAVSKEI---GVEIEFKPIDWASKESELNSGRIDCIWNGLSITPEREE 113 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN---- 168 + P D Q +++ I S S L G IC Q G+T +L L + Sbjct: 114 KMDFT-NPYMNND-QIYVVMDNSDIKSASDLKGKRICFQEGSTVDLALNKNMDLRHSFGE 171 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 +K +P ++D A+R DA + + A P ++ LP+ +S P A Sbjct: 172 IKTYPDFTSCFLDLD----ANRADAVL--VDGILADYYMTKSPGKYRRLPEKLSTEPFAI 225 Query: 229 AIIQGDTEWYNIVS-WTHYAMVTAEELGITQK 259 + +G+ E +++ + E I+QK Sbjct: 226 GVKKGNEEIVKMLNEGIEKVKASGEAAKISQK 257 >gi|91783382|ref|YP_558588.1| polar amino acid ABC transporter periplasmic ligand-binding protein [Burkholderia xenovorans LB400] gi|91687336|gb|ABE30536.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia xenovorans LB400] Length = 274 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 50/203 (24%), Positives = 83/203 (40%), Gaps = 16/203 (7%) Query: 1 MYKDFFVSILCLIILFFT--SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K + +L + L F+ S +A L K RG L GI V F + G G Sbjct: 1 MSKRSWWVVLMMFALGFSWLSAGAHADELQMAKARGKLIVGIRNDYVPFGYLDNKGHEVG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI----LSRNTDWTLLREISL 114 F+VD + ++ +F + I+++P+ A R L + +ID+ L +N D + + + Sbjct: 61 FEVDLAKFIAKDMFGSDTAIEFVPVVASNRIELLNAGRIDVIFATLGKNPDRAKVIDFT- 119 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 P G + K I+ L G IC G TL + A + Sbjct: 120 ----DPYYMMAGMVLLAPKNTTITKWEDLKGRKICGSQGNMYNRTLQEKLGADT-----V 170 Query: 175 VFERVEEIDAAYRAHRCDAYTGD 197 +F ++ A+ +RC+A D Sbjct: 171 LFTGTAQMYKAFEDNRCEAIAYD 193 >gi|158314289|ref|YP_001506797.1| extracellular solute-binding protein [Frankia sp. EAN1pec] gi|158109694|gb|ABW11891.1| extracellular solute-binding protein family 3 [Frankia sp. EAN1pec] Length = 385 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 40/183 (21%), Positives = 80/183 (43%), Gaps = 16/183 (8%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWK-----GFDVDFCRALSSAIFDDPSKIQYLPLN 84 I++ G+L+ G+ T F + +W+ GFD ++ AI DP +Q+ ++ Sbjct: 100 IRRYGYLRVGVTTVAPPFGSM----NWRTMEVEGFDPAIAGEIAGAILGDPELVQFRAVD 155 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 ++R + +DI++ T R+ + F + Y ++ G+ +V L+ Sbjct: 156 TRDREALVADGTVDIVTGTMTMTCARKER--VRFSGVYYEAAMRILVPAGAGLRTVGDLA 213 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID--AAYRAHRCDAYTGDISALY 202 G +C G+T+ +A+ + P+ RV +D AA + DA D + L Sbjct: 214 GRPVCSSQGSTSFEKVANLVRGPG---RPVAVNRVGIVDCLAALQRGEVDAVATDDTILA 270 Query: 203 ALK 205 ++ Sbjct: 271 GMR 273 >gi|239945337|ref|ZP_04697274.1| putative glutamate ABC transporter substrate-binding protein [Streptomyces roseosporus NRRL 15998] gi|239991794|ref|ZP_04712458.1| putative glutamate ABC transporter substrate-binding protein [Streptomyces roseosporus NRRL 11379] Length = 294 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 54/217 (24%), Positives = 96/217 (44%), Gaps = 16/217 (7%) Query: 31 KKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 K+RG L G E A+G + GFD++ R +++++ +P I++ + + R Sbjct: 50 KRRGHLVVGAKEDQPYLGEKDPASGIYSGFDIEIARMMAASLGFEPKTIRFRTIASANRE 109 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASI 148 ALQ+ QID +R+ +G A Y GQG ++ + I+ L+G ++ Sbjct: 110 TALQNGQIDYYVGTYTINDMRKKLVGFAGP--YYMAGQGLLVRTDEDDINGPQDLAGKTV 167 Query: 149 CVQAGTTT-ELTLADYFKAHNMKY--HPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 C AG+T + ADY KA + Y + I + + ++ DA T D + L L Sbjct: 168 CSAAGSTPYQRIAADYPKATLVAYDTYSICVDNL-------LTYQVDAVTTDDAIL--LG 218 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 P E ++ S+ P + + D N ++ Sbjct: 219 FAAKAPEEMKVVGKPFSEEPYGIGVPRSDNALRNALN 255 >gi|253689675|ref|YP_003018865.1| extracellular solute-binding protein family 3 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251756253|gb|ACT14329.1| extracellular solute-binding protein family 3 [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 268 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 10/173 (5%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K ++++ +L + S A L DI+KRG L+ + F V + +G+D+D Sbjct: 9 KKGLLAVMGAAMLLVQAGSAMADQLQDIEKRGVLRVAVPQDFPPFGSVGTDLQPQGYDID 68 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE--ISLGLAFRP 120 R L+ + K+Q +P+ + R LQ+ ++D++ + RE I A+ P Sbjct: 69 IARYLAKEM---KLKLQLVPVTSANRVPYLQTNKVDLVISSLGKNAEREKVIDFSRAYAP 125 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF-KAHNMKYH 172 +F G K ++S L G SI V G ++ L D KA +K + Sbjct: 126 --FF--LGVFGPKDSTLTSSDALEGKSIGVTRGAVEDMVLTDIAPKAAQIKRY 174 >gi|291456584|ref|ZP_06595974.1| CjaA protein [Bifidobacterium breve DSM 20213] gi|291381861|gb|EFE89379.1| CjaA protein [Bifidobacterium breve DSM 20213] Length = 282 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 59/233 (25%), Positives = 102/233 (43%), Gaps = 16/233 (6%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS-K 77 S S + IKK G ++ L + VK +G G+DV AL + I D K Sbjct: 34 SSSQQGQTVEQIKKTGKIRIATFGDLPPYGYVKNDGTRAGYDV----ALGNQIGKDLGVK 89 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 + ++ +NA R +L+S ++D++ N +T+ E + F G + I Sbjct: 90 VDWVQVNADGRVDSLKSDKVDLVLAN--FTVTDERKQVVDFADPYMKVSIGVVSPDSAKI 147 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 +S QL G + V GTT E + + ++ F+ + A++ R A D Sbjct: 148 TSADQLKGKQLAVTKGTTAEAFFTEKYPDVQLRK----FDSKTQQFQAFKDGRVAALADD 203 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 + LYA D P V + I +S +APA+ +G+ +++ WT+ + T Sbjct: 204 NTYLYA--WAKDNPGYTVGIKTIGDESTIAPAVKKGNK---SLLEWTNKEIKT 251 >gi|313891662|ref|ZP_07825269.1| ABC transporter, substrate-binding protein, family 3 [Dialister microaerophilus UPII 345-E] gi|313119940|gb|EFR43125.1| ABC transporter, substrate-binding protein, family 3 [Dialister microaerophilus UPII 345-E] Length = 265 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 54/212 (25%), Positives = 91/212 (42%), Gaps = 16/212 (7%) Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 NG+ GFDVD +A+S I +I++ P++ + L S +ID + T RE Sbjct: 57 NGNIVGFDVDIAKAVSKEI---GVEIEFKPIDWASKESELNSGRIDCIWNGLSITPEREE 113 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN---- 168 + P D Q +++ I S S L G IC Q G+T +L L + Sbjct: 114 KMDFT-NPYMNND-QIYVVMDNSDIKSASDLKGKRICFQEGSTVDLALNKNMDLRHSFGE 171 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 +K +P ++D A+R DA + + A P ++ LP+ +S P A Sbjct: 172 IKTYPDFTSCFLDLD----ANRADAVL--VDGILADYYMTKSPDKYRRLPEKLSTEPFAI 225 Query: 229 AIIQGDTEWYNIVS-WTHYAMVTAEELGITQK 259 + +G+ E +++ + E I+QK Sbjct: 226 GVKKGNEEIVKMLNEGIEEVKASGEAAKISQK 257 >gi|16119461|ref|NP_396167.1| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|15161999|gb|AAK90608.1| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 259 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 19/217 (8%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L D+ G L+ G+ + A G G DV+ R ++ D ++++ +PL Sbjct: 26 LADVTSNGKLRVGVLLDAAPWGYKDAEGKDTGLDVELARIMAK---DLNAELEIVPLTGA 82 Query: 87 ERFLALQSKQIDILSRNTDWTLLRE----ISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 R +L + ++D+L T R S A + F G G + I VS Sbjct: 83 SRIPSLLADKVDVLIAAAGATPERAQQVMFSQPYAAVSLGVFGGDG------EKIDDVSG 136 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+G I V G+T + L D A +K + FE AA+ A + D Y + SA+ Sbjct: 137 LAGKQIAVAKGSTLDTWLTD--NAPEVKL--VRFEDTPSAIAAFLAGQAD-YFAENSAI- 190 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 A+K+ +D P ++V + I SP + QG+ + N Sbjct: 191 AVKVADDNPGKNVAIVYRIRLSPAHVGVKQGEQNFLN 227 >gi|77456456|ref|YP_345961.1| extracellular solute-binding protein [Pseudomonas fluorescens Pf0-1] gi|77380459|gb|ABA71972.1| amino acid ABC transporter substrate-binding protein, PAAT family [Pseudomonas fluorescens Pf0-1] Length = 292 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 59/223 (26%), Positives = 94/223 (42%), Gaps = 19/223 (8%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 A L IK R L G+ T F V G + GFD D R + + D +K++++ + Sbjct: 40 AGYLDKIKARDKLIVGVFTDKPPFGFVNEAGRYVGFDTDIGRQFAKDLLGDENKVEFVAV 99 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 R LQS ++D++ N T R+ ++ P Q + S V +L Sbjct: 100 EPASRIPFLQSDKVDLILANMTVTPERKEAVEFT-NPNLKVAVQALVPQG----SEVKKL 154 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHP----IVFERVEEIDAAYRAHRCDAYTGDIS 199 + + T T AD + N HP + FE+ E A R DAY D Sbjct: 155 D--DLATRTTIVTTGTTADIWLTKN---HPDWKLLKFEKNSESLQALANGRGDAYAQDNL 209 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE---WYN 239 L++ N P V+ + +++P+APA+ +G+ E W N Sbjct: 210 VLFSWAKQN--PGYRVLDEKLGAEAPIAPAVKKGNIELRDWVN 250 >gi|291448799|ref|ZP_06588189.1| glutamate binding periplasmic protein [Streptomyces roseosporus NRRL 15998] gi|291351746|gb|EFE78650.1| glutamate binding periplasmic protein [Streptomyces roseosporus NRRL 15998] Length = 308 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 54/217 (24%), Positives = 96/217 (44%), Gaps = 16/217 (7%) Query: 31 KKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 K+RG L G E A+G + GFD++ R +++++ +P I++ + + R Sbjct: 64 KRRGHLVVGAKEDQPYLGEKDPASGIYSGFDIEIARMMAASLGFEPKTIRFRTIASANRE 123 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASI 148 ALQ+ QID +R+ +G A Y GQG ++ + I+ L+G ++ Sbjct: 124 TALQNGQIDYYVGTYTINDMRKKLVGFAG--PYYMAGQGLLVRTDEDDINGPQDLAGKTV 181 Query: 149 CVQAGTTT-ELTLADYFKAHNMKY--HPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 C AG+T + ADY KA + Y + I + + ++ DA T D + L L Sbjct: 182 CSAAGSTPYQRIAADYPKATLVAYDTYSICVDNL-------LTYQVDAVTTDDAIL--LG 232 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 P E ++ S+ P + + D N ++ Sbjct: 233 FAAKAPEEMKVVGKPFSEEPYGIGVPRSDNALRNALN 269 >gi|327399612|ref|YP_004340481.1| ABC transporter periplasmic subunit family 3 [Hippea maritima DSM 10411] gi|327182241|gb|AEA34422.1| ABC-type transporter, periplasmic subunit family 3 [Hippea maritima DSM 10411] Length = 275 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 62/247 (25%), Positives = 104/247 (42%), Gaps = 24/247 (9%) Query: 5 FFVSILCLIILFFTSFSTNA--------SILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 F V ++ L +L SF++ A S L I+KRG L+ G+N G + F G Sbjct: 7 FLVFVVSLFML--VSFTSRAADINLWHNSTLYKIQKRGVLRVGLNAGYMPFEMRSKTGKI 64 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFDVD + ++ A+ K++ + + AL + + DI+ T R + + Sbjct: 65 IGFDVDMAKLMAKAM---GVKLKIVNTDWDGIIPALMTNKFDIIMSGMTITQKRNLKVNF 121 Query: 117 AFRPITYFDGQGFIMHKKKG--ISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYH 172 A I GQ +++KK I S L+ ++ V GTT + Y ++ Sbjct: 122 ADPYIVV--GQTVLVNKKWAGKIKSYKDLNDPKFTVTVMLGTTGDFAAKKYISKAKIQE- 178 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 F+ EE R DA+ D ++ +N + + L + PL AI + Sbjct: 179 ---FQTEEEAVMQVMQGRADAFVYD-KPYESIFYSNKGKGKLIFLDKPFTYEPLGWAINK 234 Query: 233 GDTEWYN 239 GD ++ N Sbjct: 235 GDPDFLN 241 >gi|315605387|ref|ZP_07880430.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Actinomyces sp. oral taxon 180 str. F0310] gi|315312956|gb|EFU61030.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Actinomyces sp. oral taxon 180 str. F0310] Length = 299 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 67/267 (25%), Positives = 120/267 (44%), Gaps = 31/267 (11%) Query: 19 SFSTNASILGD-----IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 S S ++ +GD IK+ G + GI + F + A+G G+DV + +++ D Sbjct: 36 SDSATSAQVGDRSPEQIKEAGEIVIGIFSDKAPFGYIDADGKPAGYDVVYGDRIAA---D 92 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 +Y+P++A R L S ++DI N +T+ E + + F + G + Sbjct: 93 LGVTAKYVPVDAAARTEVLASNKVDITLAN--FTVTPERAEKVDFANPYFKVSLGVVSPS 150 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV-FERVEEIDAAYRA---H 189 I+ V QL+G ++ V GTT E YF+A+ HP V ++ ++ AY+A Sbjct: 151 SAEITDVGQLAGKTLIVTKGTTAEA----YFEAN----HPEVKLQKYDQYSDAYQALEDG 202 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 R DA++ D + + A + + P V + + S +A A+ +G+ ++ W + + Sbjct: 203 RGDAFSTDNTEVIAWAIAH--PGFSVGIKSLGETSYIAAAVKKGNAP---LLDWLNNQLT 257 Query: 250 TAEELGITQKNINQ----VSKDTTNPD 272 E K+ Q V D PD Sbjct: 258 ELGEENFFHKDYEQTLAPVYGDAATPD 284 >gi|302545376|ref|ZP_07297718.1| amino acid ABC transporter, amino acid-binding protein [Streptomyces hygroscopicus ATCC 53653] gi|302462994|gb|EFL26087.1| amino acid ABC transporter, amino acid-binding protein [Streptomyces himastatinicus ATCC 53653] Length = 348 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 62/130 (47%), Gaps = 11/130 (8%) Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT--DWTLL 109 A G+ GFD+D RA++ IF DP + Y + +R ALQ ++DI+ R + + Sbjct: 117 ATGELTGFDIDIVRAIAKDIFGDPDAVIYRTIPTSQRIKALQQGKVDIVVRTMTINCDRI 176 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHN 168 ++++ A+ + GQ ++ I+ ++ L G +C G+T E L + K Sbjct: 177 KDVAFSTAY----FQAGQQVLVPDDSSITGYNRTLRGKRVCTAQGSTAEAVLDEPEKGAE 232 Query: 169 ----MKYHPI 174 +K P+ Sbjct: 233 ALGAIKVKPV 242 >gi|289672924|ref|ZP_06493814.1| extracellular solute-binding protein [Pseudomonas syringae pv. syringae FF5] gi|330982422|gb|EGH80525.1| extracellular solute-binding protein [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 290 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 59/226 (26%), Positives = 97/226 (42%), Gaps = 19/226 (8%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 S ++S L IK R L G+ + F V G + GFD D + + + D KI++ Sbjct: 35 SPSSSYLETIKARDKLIVGVFSDKPPFGFVNEQGQYVGFDTDLGKRFAKDLLGDEKKIEF 94 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + + R LQS ++D++ N T R ++ P Q + + + ++ Sbjct: 95 VVVEPASRIPFLQSDKVDLILANMTVTPERREAVDFT-NPNLRVAVQALV-PQASPVKTL 152 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHP----IVFERVEEIDAAYRAHRCDAYTG 196 L+ + V GTT +L L K HP + FE+ E A R DAY Sbjct: 153 DDLASKTTIVTTGTTADLWLT--------KNHPDWKVLKFEKNSESLQALANGRGDAYAQ 204 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE---WYN 239 D L++ N P V+ + ++P+APA+ +G+ E W N Sbjct: 205 DNLVLFSWAKKN--PGYRVLEQKLGDEAPIAPAVKKGNIELRDWVN 248 >gi|319442374|ref|ZP_07991530.1| putative extracellular solute-binding protein [Corynebacterium variabile DSM 44702] Length = 369 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 34/134 (25%), Positives = 68/134 (50%), Gaps = 5/134 (3%) Query: 29 DIKKRGFLKCGINTGL--VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 DI RG L G++ + +GF + G+ GF+VD ++ IF DP ++ + + Sbjct: 84 DIIDRGRLIVGVSQSMNQLGFRD-PVTGEMAGFEVDIAHEIARDIFGDPDRVDFRYIEGD 142 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 R AL+ +DI+ R+ T LR++++ + +T ++++ GI+S L+ Sbjct: 143 GRDEALRDGDVDIVIRSMTVTRLRQMNVEFSIPYLTV--SPRLLVNRNSGIASEEDLADK 200 Query: 147 SICVQAGTTTELTL 160 ++C +T+ +L Sbjct: 201 TVCATTRSTSAQSL 214 >gi|302541695|ref|ZP_07294037.1| putative glutamate periplasmic binding protein [Streptomyces hygroscopicus ATCC 53653] gi|302459313|gb|EFL22406.1| putative glutamate periplasmic binding protein [Streptomyces himastatinicus ATCC 53653] Length = 305 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 5/144 (3%) Query: 31 KKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 K+ G+L G+ E A G + GFD++ + +S+++ P I++ + + R Sbjct: 63 KRLGYLTVGVKEDQPYLGEKDPATGRYSGFDIEIAKMMSASLGFPPRTIRFRSIASANRE 122 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASI 148 ALQ+ QID LR+ +G A Y GQ ++ I + L+G ++ Sbjct: 123 TALQNGQIDYYVGTYTINPLRKRLVGFAG--PYYMAGQSLLVRTDTDDIHGPADLAGKTV 180 Query: 149 CVQAGTTT-ELTLADYFKAHNMKY 171 C AG+T + DY KAH + Y Sbjct: 181 CSAAGSTPLQRIQHDYPKAHAVAY 204 >gi|242241397|ref|YP_002989578.1| extracellular solute-binding protein family 3 [Dickeya dadantii Ech703] gi|242133454|gb|ACS87756.1| extracellular solute-binding protein family 3 [Dickeya dadantii Ech703] Length = 278 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 65/231 (28%), Positives = 99/231 (42%), Gaps = 22/231 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59 M K F ++ L L F S + A L DI+K G +K + F V G+ Sbjct: 1 MKKQVF-ALTLLAGLVFLSGAAQADKLDDIQKAGVVKVAVFDSNPPFGYVDPQSKKLVGY 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD A+ A+ K++ N R L SK++D++S N +T+ E + + F Sbjct: 60 DVDVAEAIGKALG---VKVELRATNPANRIPLLTSKKVDLISAN--FTITDERAKQVNFS 114 Query: 120 PITYF-DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH---PIV 175 I YF GQ FI +K + + + I GT E+TL ++F + + + P+ Sbjct: 115 -IPYFATGQKFIA-RKGALKTPDDIKTLRIGADKGTVQEITLREHFPSAKVISYDDTPLA 172 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYAL--KLTNDRPSEHVILPDIISKS 224 F AA R A T D + L L L D+ + I P I+K Sbjct: 173 F-------AALRNGNVQAITQDDAKLVGLLGNLPADQKAGFEISPFSITKE 216 >gi|16264001|ref|NP_436793.1| putative ABC transporter periplasmic amino acid-binding protein [Sinorhizobium meliloti 1021] gi|307300146|ref|ZP_07579931.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti BL225C] gi|15140125|emb|CAC48653.1| putative ABC transporter periplasmic amino acid-binding protein [Sinorhizobium meliloti 1021] gi|306905035|gb|EFN35618.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti BL225C] Length = 268 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 45/162 (27%), Positives = 76/162 (46%), Gaps = 9/162 (5%) Query: 8 SILCLIILFFTSFST--NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 S+L ++ T+ ++ +A L DI G L+C + N + GFDVD+C Sbjct: 4 SVLAFGLVAATALTSPAHADKLDDIIASGTLRCAVVLDFPPMGSRDENNEPIGFDVDYCN 63 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 L++A+ ++I P ER AL S ++D+ +T TL R ++G+ + YF Sbjct: 64 DLATAL-GVTAEIVETPF--PERIPALMSGRVDVGVASTSDTLERAKTVGMT---VPYFA 117 Query: 126 GQ-GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 + ++K GI S + G + AGT + L + KA Sbjct: 118 FEMAVTANEKSGIKSFEDMKGKVVGATAGTYEAIALENQVKA 159 >gi|291280399|ref|YP_003497234.1| amino acid ABC transporter substrate-binding protein [Deferribacter desulfuricans SSM1] gi|290755101|dbj|BAI81478.1| amino acid ABC transporter, substrate-binding protein [Deferribacter desulfuricans SSM1] Length = 269 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 69/251 (27%), Positives = 104/251 (41%), Gaps = 30/251 (11%) Query: 3 KDFFVSILCLIILFFTSFSTNA-------SILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 + FFVS+L + LF +F A S L I KRG L+ G+ +G F NG+ Sbjct: 2 RKFFVSLL--VFLFAATFLYAADNSLWEKSTLNQILKRGELRVGLESGYKPFEMTAKNGE 59 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFDVD + ++ A+ K++ + AL + + DI+ T R + + Sbjct: 60 IIGFDVDLAKVMAKAM---GVKLKIVNTAWDGIIPALITDKFDIIMSGMTITQKRNLQVN 116 Query: 116 LAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 A I GQ ++HKK I S L+ + ++L YF A KY P Sbjct: 117 FADPYIIV--GQTLLIHKKDAGKIKSYKDLNNPKYVI----ASKLGTTGYFAAK--KYIP 168 Query: 174 I----VFERVEEIDAAYRAHRCDAYTGDIS-ALYALKLTNDRPSEHVILPDIISKSPLAP 228 FE + + + DA+ D+ Y L DR V L + PL Sbjct: 169 KAKVNAFETEADAFQDFINGKADAFVYDLPLCAYYYSLYKDRV---VFLDKPFTFEPLGW 225 Query: 229 AIIQGDTEWYN 239 AI +GD ++ N Sbjct: 226 AIKKGDPDFLN 236 >gi|150376017|ref|YP_001312613.1| extracellular solute-binding protein [Sinorhizobium medicae WSM419] gi|150030564|gb|ABR62680.1| extracellular solute-binding protein family 3 [Sinorhizobium medicae WSM419] Length = 268 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 9/162 (5%) Query: 8 SILCLIILFFTSFST--NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 SIL ++ T+ ++ +A L DI G L+C + N + GFDVD+C Sbjct: 4 SILAFGLVAATALTSPAHADKLDDIIASGTLRCAVVLDFPPMGSRDENNEPIGFDVDYCN 63 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 L+ A+ ++I P ER AL S ++D+ +T TL R ++G+ + YF Sbjct: 64 DLAKAL-GVTAEIVETPF--PERIPALMSGRVDVGVASTSDTLERAKTVGMT---VPYFA 117 Query: 126 GQ-GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 + ++K GI S + G + AGT + L + KA Sbjct: 118 FEMAVTANEKSGIKSFEDMKGKVVGATAGTYEAIALENQVKA 159 >gi|157164816|ref|YP_001466613.1| surface antigen, CjaA [Campylobacter concisus 13826] gi|112800727|gb|EAT98071.1| surface antigen, CjaA [Campylobacter concisus 13826] Length = 285 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 51/224 (22%), Positives = 98/224 (43%), Gaps = 15/224 (6%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 S + IK+RG+++ G+ + F V +G +G+D+ F + ++ + D SK+++ Sbjct: 32 SNQTDAIAKIKERGYVRIGVFSDKPPFGYVDKDGKNQGYDIYFAKRIAKDLLGDESKVKF 91 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLRE--ISLGLAFRPITYFDGQGFIMHKKKGIS 138 + A R L + ++DI N T R + L + ++ G + + I Sbjct: 92 ELVEAAGRVEVLTADKVDITLANFTKTPERAQVVDFALPYMKVSL----GIVSPEGAVIK 147 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 SV +L ++ V GTT + +F + + +++ E AA R A D Sbjct: 148 SVDELKDKTLIVNKGTTADA----FFTKNYPDIKLLKYDQNTETFAALVDKRGAALAHDN 203 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT---EWYN 239 + L+A + P V + + +APA+ +G+ EW N Sbjct: 204 ALLFA--WAKETPGFVVGVEALGDVDVIAPAVKKGNKALLEWIN 245 >gi|330890817|gb|EGH23478.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. mori str. 301020] Length = 283 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 53/233 (22%), Positives = 96/233 (41%), Gaps = 5/233 (2%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + S L + KRG L G + + A+G +GFD+D R ++ +F+DPSK+++ Sbjct: 27 AAEGSKLDAVLKRGNLVVGTGSTNAPWHFQGADGKLQGFDIDIGRIIAKGLFNDPSKVEF 86 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + ++ R L + ++DI + T R + +AF Y +G ++ + Sbjct: 87 VVQSSDARIPNLLTDKVDISCQFITVTASR--AQQVAFTLPYYREGVALLLPANSKYKEI 144 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L A V + + K ++ V+ + A + R D D S+ Sbjct: 145 DDLKAAGDGVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLMYQAINSGRADTAATDQSS 204 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT-HYAMVTAE 252 + L + N P + + A A+ +GD +W N V+ H AM E Sbjct: 205 VKYLMVQN--PGRYRSPAFAWNPQTYACAVKRGDQDWLNFVNTALHEAMTGVE 255 >gi|307130478|ref|YP_003882494.1| amino acid ABC transporter periplasmic binding protein [Dickeya dadantii 3937] gi|306528007|gb|ADM97937.1| amino acid ABC transporter periplasmic binding protein (precursor) [Dickeya dadantii 3937] Length = 278 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 6/147 (4%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFD 73 + FTS A +L D+ RG LKC + + + F+ AN G DVD C AL+ + Sbjct: 14 VLFTSIGAQADLLADMTARGELKCAVYSDVPPFSSPDANTRQLVGMDVDLCNALAKQM-- 71 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 K+ +P + + R + + + D+L N +T R + F Y + ++ K Sbjct: 72 -GLKLTLVPTSVEARIAVIVTGRADVLIANLAYTKTR--GNQIQFSDPYYVAKEMLLVKK 128 Query: 134 KKGISSVSQLSGASICVQAGTTTELTL 160 + ++ G I GTT+E ++ Sbjct: 129 ENADKTLEYFKGKRISATKGTTSEQSI 155 >gi|29375695|ref|NP_814849.1| amino acid ABC transporter, amino acid-binding protein [Enterococcus faecalis V583] gi|227518374|ref|ZP_03948423.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis TX0104] gi|227552903|ref|ZP_03982952.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis HH22] gi|229546202|ref|ZP_04434927.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis TX1322] gi|229550387|ref|ZP_04439112.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis ATCC 29200] gi|255976201|ref|ZP_05426787.1| extracellular solute-binding protein [Enterococcus faecalis T2] gi|256762127|ref|ZP_05502707.1| extracellular solute-binding protein [Enterococcus faecalis T3] gi|256852769|ref|ZP_05558139.1| amino acid ABC transporter [Enterococcus faecalis T8] gi|256958616|ref|ZP_05562787.1| extracellular solute-binding protein [Enterococcus faecalis DS5] gi|256962285|ref|ZP_05566456.1| extracellular solute-binding protein [Enterococcus faecalis Merz96] gi|256965480|ref|ZP_05569651.1| extracellular solute-binding protein [Enterococcus faecalis HIP11704] gi|257078030|ref|ZP_05572391.1| extracellular solute-binding protein [Enterococcus faecalis JH1] gi|257082918|ref|ZP_05577279.1| extracellular solute-binding protein [Enterococcus faecalis E1Sol] gi|257085620|ref|ZP_05579981.1| extracellular solute-binding protein [Enterococcus faecalis Fly1] gi|257086474|ref|ZP_05580835.1| extracellular solute-binding protein [Enterococcus faecalis D6] gi|257415733|ref|ZP_05592727.1| extracellular solute-binding protein [Enterococcus faecalis AR01/DG] gi|257418948|ref|ZP_05595942.1| extracellular solute-binding protein [Enterococcus faecalis T11] gi|257422964|ref|ZP_05599954.1| ABC amino acid transporter [Enterococcus faecalis X98] gi|293383314|ref|ZP_06629229.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Enterococcus faecalis R712] gi|293387529|ref|ZP_06632078.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Enterococcus faecalis S613] gi|294780990|ref|ZP_06746342.1| putative bifunctional adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis PC1.1] gi|300859786|ref|ZP_07105874.1| putative Major cell-binding factor [Enterococcus faecalis TUSoD Ef11] gi|307268767|ref|ZP_07550135.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX4248] gi|307273810|ref|ZP_07555032.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0855] gi|307274579|ref|ZP_07555759.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX2134] gi|307278845|ref|ZP_07559908.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0860] gi|307288576|ref|ZP_07568560.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0109] gi|307291102|ref|ZP_07570987.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0411] gi|312899594|ref|ZP_07758920.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0470] gi|312905821|ref|ZP_07764841.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis DAPTO 512] gi|312909124|ref|ZP_07767983.1| putative bifunctional adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis DAPTO 516] gi|312951371|ref|ZP_07770269.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0102] gi|29343156|gb|AAO80919.1| amino acid ABC transporter, amino acid-binding protein [Enterococcus faecalis V583] gi|227074052|gb|EEI12015.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis TX0104] gi|227177975|gb|EEI58947.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis HH22] gi|229304509|gb|EEN70505.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis ATCC 29200] gi|229308726|gb|EEN74713.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis TX1322] gi|255969073|gb|EET99695.1| extracellular solute-binding protein [Enterococcus faecalis T2] gi|256683378|gb|EEU23073.1| extracellular solute-binding protein [Enterococcus faecalis T3] gi|256711228|gb|EEU26266.1| amino acid ABC transporter [Enterococcus faecalis T8] gi|256949112|gb|EEU65744.1| extracellular solute-binding protein [Enterococcus faecalis DS5] gi|256952781|gb|EEU69413.1| extracellular solute-binding protein [Enterococcus faecalis Merz96] gi|256955976|gb|EEU72608.1| extracellular solute-binding protein [Enterococcus faecalis HIP11704] gi|256986060|gb|EEU73362.1| extracellular solute-binding protein [Enterococcus faecalis JH1] gi|256990948|gb|EEU78250.1| extracellular solute-binding protein [Enterococcus faecalis E1Sol] gi|256993650|gb|EEU80952.1| extracellular solute-binding protein [Enterococcus faecalis Fly1] gi|256994504|gb|EEU81806.1| extracellular solute-binding protein [Enterococcus faecalis D6] gi|257157561|gb|EEU87521.1| extracellular solute-binding protein [Enterococcus faecalis ARO1/DG] gi|257160776|gb|EEU90736.1| extracellular solute-binding protein [Enterococcus faecalis T11] gi|257164788|gb|EEU94748.1| ABC amino acid transporter [Enterococcus faecalis X98] gi|291079337|gb|EFE16701.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Enterococcus faecalis R712] gi|291083039|gb|EFE20002.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Enterococcus faecalis S613] gi|294451936|gb|EFG20386.1| putative bifunctional adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis PC1.1] gi|300850604|gb|EFK78353.1| putative Major cell-binding factor [Enterococcus faecalis TUSoD Ef11] gi|306497756|gb|EFM67288.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0411] gi|306500483|gb|EFM69816.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0109] gi|306504516|gb|EFM73723.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0860] gi|306508731|gb|EFM77821.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX2134] gi|306509495|gb|EFM78543.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0855] gi|306514895|gb|EFM83442.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX4248] gi|310628160|gb|EFQ11443.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis DAPTO 512] gi|310630631|gb|EFQ13914.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0102] gi|311290548|gb|EFQ69104.1| putative bifunctional adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis DAPTO 516] gi|311293273|gb|EFQ71829.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0470] gi|315028076|gb|EFT40008.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX2137] gi|315031597|gb|EFT43529.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0017] gi|315034961|gb|EFT46893.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0027] gi|315148456|gb|EFT92472.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX4244] gi|315150401|gb|EFT94417.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0012] gi|315153642|gb|EFT97658.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0031] gi|315156540|gb|EFU00557.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0043] gi|315158366|gb|EFU02383.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0312] gi|315165530|gb|EFU09547.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX1302] gi|315168387|gb|EFU12404.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX1341] gi|315170970|gb|EFU14987.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX1342] gi|315174638|gb|EFU18655.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX1346] gi|315573711|gb|EFU85902.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0309B] gi|315582674|gb|EFU94865.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0309A] gi|323480358|gb|ADX79797.1| amino acid ABC transporter, amino acid-binding protein [Enterococcus faecalis 62] gi|327534750|gb|AEA93584.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis OG1RF] gi|329576390|gb|EGG57903.1| major cell-binding factor [Enterococcus faecalis TX1467] Length = 275 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 44/185 (23%), Positives = 84/185 (45%), Gaps = 4/185 (2%) Query: 19 SFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDW-KGFDVDFCRALSSAIFDDPS 76 S S+N ++ + +KK G +K G+ + F + + + +G + D R ++ I Sbjct: 34 SASSNKTVTVEQLKKAGKIKVGVKEDIPNFGYMNPDTNKNEGMEPDIARLIAKEITGSEE 93 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 ++++ + AK R L + ++D++ +T+ E F Y D GF++ K+ Sbjct: 94 NVEFVGVTAKTRGPLLDNGELDMVIAT--FTITDERKKTYNFTTPYYTDEIGFLVRKEDN 151 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 SS+ L G +I V TT+ L + +K+ E+ A + R DA++ Sbjct: 152 FSSMKDLDGKTIGVAQSATTKENLEKKAQEEGIKFTYQELGSYPELKTALTSKRIDAFSV 211 Query: 197 DISAL 201 D S L Sbjct: 212 DKSIL 216 >gi|70733740|ref|YP_257380.1| glutamine/glutamate ABC transporter periplasmic glutamine/glutamate-binding protein [Pseudomonas fluorescens Pf-5] gi|68348039|gb|AAY95645.1| glutamine/glutamate ABC transporter, periplasmic glutamine/glutamate-binding protein [Pseudomonas fluorescens Pf-5] Length = 294 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 58/220 (26%), Positives = 92/220 (41%), Gaps = 19/220 (8%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L IK R L G+ T F V G + GFD D R + + D +K++++ + Sbjct: 45 LDKIKARDKLIVGVFTDKPPFGFVDETGRYVGFDTDIGRQFAKDLLGDENKVEFVAVEPA 104 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 R LQS ++D++ N T R+ ++ P Q + S+V L Sbjct: 105 SRIPFLQSDKVDLILANMTVTPERKEAVEFT-NPNLKVAVQALVPEG----SAVKSLD-- 157 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHP----IVFERVEEIDAAYRAHRCDAYTGDISALY 202 + + T T AD + N HP + FE+ E A R DAY D L+ Sbjct: 158 DLASRTTIVTTGTTADIWLTQN---HPDWKLLKFEKNTESLQALANGRGDAYAQDNLILF 214 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE---WYN 239 + N P V+ + ++P+APA+ +G+ E W N Sbjct: 215 SWSKQN--PGYRVLPQTLGEQAPIAPAVKKGNIELRDWVN 252 >gi|315144632|gb|EFT88648.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX2141] gi|315160937|gb|EFU04954.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0645] Length = 275 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 44/185 (23%), Positives = 84/185 (45%), Gaps = 4/185 (2%) Query: 19 SFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDW-KGFDVDFCRALSSAIFDDPS 76 S S+N ++ + +KK G +K G+ + F + + + +G + D R ++ I Sbjct: 34 SASSNKTVTVEQLKKAGKIKVGVKEDIPNFGYMNPDTNKNEGMEPDIARLIAKEITGSEE 93 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 ++++ + AK R L + ++D++ +T+ E F Y D GF++ K+ Sbjct: 94 NVEFVGVTAKTRGPLLDNGELDMVIAT--FTITDERKKTYNFTTPYYTDEIGFLVRKEDN 151 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 SS+ L G +I V TT+ L + +K+ E+ A + R DA++ Sbjct: 152 FSSMKDLDGKTIGVAQSATTKENLEKKAQEEGIKFTYQELGSYPELKTALTSKRIDAFSV 211 Query: 197 DISAL 201 D S L Sbjct: 212 DKSIL 216 >gi|307328497|ref|ZP_07607672.1| extracellular solute-binding protein family 3 [Streptomyces violaceusniger Tu 4113] gi|306885909|gb|EFN16920.1| extracellular solute-binding protein family 3 [Streptomyces violaceusniger Tu 4113] Length = 351 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 34/131 (25%), Positives = 63/131 (48%), Gaps = 13/131 (9%) Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT--DWTLL 109 A GD GFD+D RA++ IF DP + + + +R ALQ ++D++ R + + Sbjct: 120 ATGDLTGFDIDLVRAIAEDIFGDPDAVIFRTIPTSQRIKALQQGKVDVVVRTMTINCDRI 179 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTL------AD 162 ++++ A+ + GQ ++ I+ ++ L G +C G+T E L A+ Sbjct: 180 KDVAFSTAY----FQAGQQVLVADDSSITGYNKTLRGKRVCTAQGSTAEAELDKPDTGAE 235 Query: 163 YFKAHNMKYHP 173 + A +K P Sbjct: 236 HLGAIKVKPVP 246 >gi|157369177|ref|YP_001477166.1| extracellular solute-binding protein [Serratia proteamaculans 568] gi|157320941|gb|ABV40038.1| extracellular solute-binding protein family 3 [Serratia proteamaculans 568] Length = 263 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 37/161 (22%), Positives = 76/161 (47%), Gaps = 5/161 (3%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 +K V L ++L + S A L +I++RG L+ + F V + +G+D+ Sbjct: 3 FKKIGVVALGAVLLMAQAASAMADQLQEIQQRGVLRVAVPQDFPPFGSVGTDLQPQGYDI 62 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D + L+ + K+Q +P+ + R LQ+ ++D++ + RE ++ + Sbjct: 63 DMAQYLADKM---KLKLQLVPVTSANRVPYLQTNKVDLVISSLGKNAEREKAIAFSRTYA 119 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162 +F G K+ ++ +QL+G +I V G ++ L+D Sbjct: 120 PFF--LGVFGPKESVLADATQLNGKTIGVTRGAVEDMVLSD 158 >gi|194017138|ref|ZP_03055750.1| glutamine-binding protein (GlnBP) [Bacillus pumilus ATCC 7061] gi|194011006|gb|EDW20576.1| glutamine-binding protein (GlnBP) [Bacillus pumilus ATCC 7061] Length = 269 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 41/184 (22%), Positives = 83/184 (45%), Gaps = 10/184 (5%) Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 +NGD +GFD+D +A++ + D K ++ + +K R LQ + DI + T+ E Sbjct: 65 SNGDIEGFDIDIAKAIAKEMLGDEGKAEFKEVTSKTRIPLLQ--KGDIHAIVATMTITEE 122 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMK 170 + F + + GQ ++ K I S+ L G + G+T+ + + ++ Sbjct: 123 RKKEVNFSDVYFEAGQSLLVKKGSDIQSIDDLKKGTKVLAVKGSTSSQNIREKAPEASV- 181 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 + FE +E A ++++ T D + L+ + D S + ++ + P A+ Sbjct: 182 ---LEFENYQEAFTALKSNQGQVLTTDNAILFGMA---DEDSNYEVVGGTFTDEPYGIAV 235 Query: 231 IQGD 234 +GD Sbjct: 236 KKGD 239 >gi|323698009|ref|ZP_08109921.1| extracellular solute-binding protein family 3 [Desulfovibrio sp. ND132] gi|323457941|gb|EGB13806.1| extracellular solute-binding protein family 3 [Desulfovibrio desulfuricans ND132] Length = 253 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 37/141 (26%), Positives = 67/141 (47%), Gaps = 5/141 (3%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 F +F+ + L IK +G + G + F + G+ GFDVD A+++ + Sbjct: 21 FATFAQAGTTLDKIKAKGVITVGNSPDYPPFESIGDGGERVGFDVDLLNAIAAKM---GV 77 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 K+Q++ ++ A QS Q+D+ + +++ E + ++F + GQ ++ Sbjct: 78 KVQWVTMDFAAIVTATQSGQVDM--GMSGFSVTPERAGQVSFSAPYFASGQALVVRNDSD 135 Query: 137 ISSVSQLSGASICVQAGTTTE 157 I S + L G I VQ GTT E Sbjct: 136 IKSAADLKGKKIAVQLGTTGE 156 >gi|312903652|ref|ZP_07762828.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0635] gi|310633005|gb|EFQ16288.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0635] gi|315577480|gb|EFU89671.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0630] Length = 287 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 44/185 (23%), Positives = 84/185 (45%), Gaps = 4/185 (2%) Query: 19 SFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDW-KGFDVDFCRALSSAIFDDPS 76 S S+N ++ + +KK G +K G+ + F + + + +G + D R ++ I Sbjct: 46 SASSNKTVTVEQLKKAGKIKVGVKEDIPNFGYMNPDTNKNEGMEPDIARLIAKEITGSEE 105 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 ++++ + AK R L + ++D++ +T+ E F Y D GF++ K+ Sbjct: 106 NVEFVGVTAKTRGPLLDNGELDMVIAT--FTITDERKKTYNFTTPYYTDEIGFLVRKEDN 163 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 SS+ L G +I V TT+ L + +K+ E+ A + R DA++ Sbjct: 164 FSSMKDLDGKTIGVAQSATTKENLEKKAQEEGIKFTYQELGSYPELKTALTSKRIDAFSV 223 Query: 197 DISAL 201 D S L Sbjct: 224 DKSIL 228 >gi|163793471|ref|ZP_02187446.1| extracellular solute-binding protein, family 3 [alpha proteobacterium BAL199] gi|159181273|gb|EDP65788.1| extracellular solute-binding protein, family 3 [alpha proteobacterium BAL199] Length = 304 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 57/267 (21%), Positives = 109/267 (40%), Gaps = 19/267 (7%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 + ++ S L + RG L+ G + + G G D+D R ++ ++FDDP+K+ Sbjct: 45 TVDSSKSKLQQVLSRGVLRVGTGSTNPPWHFEDDTGKLVGMDIDMARLIAKSLFDDPTKV 104 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDW-TLLREISLGLAFRPITYFDGQG-FIMHKKKG 136 +++ + R +L + ++D++ + W T+ + + F Y +G G +M Sbjct: 105 EFVIQGSDARIPSLITDKVDVICQ---WMTITAGRAQQVEFTVPYYREGVGLLVMADNPK 161 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 L A V+ G + + ++ + F+ + A A R DAY G Sbjct: 162 YKKFDDLMMAGDSVKVGAMQNVFIEEWIHKGLPQAKVDQFDSPDTTLQALNAGRVDAYLG 221 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 D SA+ L N P + + A A+ GD W N V+ + Sbjct: 222 DQSAIRW--LMNQFPGRYADSGYGWLPNSYASAVRPGDPVWLNWVN------------TV 267 Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSS 283 ++ + V DT +++ GID ++ Sbjct: 268 YREALMGVDFDTMKASYKKWFGIDVAT 294 >gi|290473276|ref|YP_003466142.1| putative amino acid-binding protein (ABC superfamily, peri_bind) [Xenorhabdus bovienii SS-2004] gi|289172575|emb|CBJ79344.1| putative amino acid-binding protein (ABC superfamily, peri_bind) [Xenorhabdus bovienii SS-2004] Length = 282 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 69/246 (28%), Positives = 109/246 (44%), Gaps = 25/246 (10%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCR 65 ++ L L S A L DIKK G ++ + + GF + + G+DVD Sbjct: 11 TVALLTSLALVSGVAKADKLDDIKKTGTVRIAVFDSNPPFGFIDPQTKK-LAGYDVDIAN 69 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF- 124 A++S D K++ P N R L SK+ID+++ N +T+ E + + F I YF Sbjct: 70 AVAS---DLGVKLELRPTNPANRIPLLSSKKIDLIAAN--FTITDERAKQVNFS-IPYFA 123 Query: 125 DGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLAD-YFKAHNMKYH--PIVFERVE 180 GQ FI +KG+ + ++ I GT E+TL + Y A + Y P+ F Sbjct: 124 TGQKFIA--RKGVLKTPDDIAKLRIGADKGTVQEITLRERYPTAKVISYDDTPLAF---- 177 Query: 181 EIDAAYRAHRCDAYTGDISALYAL--KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 AA R A T D + L L + + ++ I P I++ A A +G+ Sbjct: 178 ---AALRNGNVQAITQDDAKLVGLLANVPEAQKADFEISPFSITREYQAVAATKGEDRLI 234 Query: 239 NIVSWT 244 N V+ T Sbjct: 235 NAVNQT 240 >gi|167581949|ref|ZP_02374823.1| extracellular solute-binding protein [Burkholderia thailandensis TXDOH] Length = 271 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 61/184 (33%), Positives = 84/184 (45%), Gaps = 21/184 (11%) Query: 27 LGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 L DIKK G L+ + GF + K N G DVD+ RAL+ + K++ P N Sbjct: 27 LDDIKKAGVLRVATFDSNPPFGFVDPKTN-RIVGLDVDYARALADKLG---VKLKLQPTN 82 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF-DGQGFIMHKKKGISSVSQL 143 R L S ++D++ N +T+ E + + F I YF GQ F + KK + S QL Sbjct: 83 PANRIPFLTSGKVDLVLAN--FTITGERAKQVDFS-IPYFASGQQF-LAKKGVLKSADQL 138 Query: 144 SGASICVQAGTTTELTLAD-YFKAHNMKYH--PIVFERVEEIDAAYRAHRCDAYTGDISA 200 + I GTT E+TL + Y +A + Y P F AA RA A T D Sbjct: 139 NRLRIGADKGTTNEVTLREKYPQATIVAYDDTPFAF-------AALRAGNVQAITQDGPK 191 Query: 201 LYAL 204 L L Sbjct: 192 LIGL 195 >gi|83719161|ref|YP_442971.1| extracellular solute-binding protein [Burkholderia thailandensis E264] gi|167620111|ref|ZP_02388742.1| extracellular solute-binding protein [Burkholderia thailandensis Bt4] gi|257139195|ref|ZP_05587457.1| extracellular solute-binding protein [Burkholderia thailandensis E264] gi|83652986|gb|ABC37049.1| extracellular solute-binding protein [Burkholderia thailandensis E264] Length = 271 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 61/184 (33%), Positives = 84/184 (45%), Gaps = 21/184 (11%) Query: 27 LGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 L DIKK G L+ + GF + K N G DVD+ RAL+ + K++ P N Sbjct: 27 LDDIKKAGVLRVATFDSNPPFGFVDPKTN-RIVGLDVDYARALADKLG---VKLKLQPTN 82 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF-DGQGFIMHKKKGISSVSQL 143 R L S ++D++ N +T+ E + + F I YF GQ F + KK + S QL Sbjct: 83 PANRIPFLTSGKVDLVLAN--FTITGERAKQVDFS-IPYFASGQQF-LAKKGVLKSADQL 138 Query: 144 SGASICVQAGTTTELTLAD-YFKAHNMKYH--PIVFERVEEIDAAYRAHRCDAYTGDISA 200 + I GTT E+TL + Y +A + Y P F AA RA A T D Sbjct: 139 NRLRIGADKGTTNEVTLREKYPQATIVAYDDTPFAF-------AALRAGNVQAITQDGPK 191 Query: 201 LYAL 204 L L Sbjct: 192 LIGL 195 >gi|111223729|ref|YP_714523.1| putative transporter substrate-binding protein [Frankia alni ACN14a] gi|111151261|emb|CAJ62973.1| Putative transporter substrate-binding protein (partial) [Frankia alni ACN14a] Length = 272 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 47/180 (26%), Positives = 80/180 (44%), Gaps = 17/180 (9%) Query: 33 RGFLKCGINT-----GLVGFAEVKANGDWKGFDVDFCRALSSAIF---DDPSKIQYLPLN 84 RG+L+ GI T GL+ + ++ +GFDV RA+++AIF D IQ+ + Sbjct: 14 RGYLRVGIVTDAPPAGLMNWRTLR----LEGFDVGIARAVAAAIFGPDDVDDHIQFRAVT 69 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 ER L+S +D+L T R+ + F + Y ++ ++ G + ++ L+ Sbjct: 70 TSEREDLLRSNMVDMLVATMTITCERKRQV--RFSSVYYESTLRLLVRQEAGFTGIADLA 127 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G +C AG+T LA + + R+ + A + DA GD L L Sbjct: 128 GRPVCTSAGSTASEKLA---RLPTPAPRVVTRSRIADCLVALQHGDVDAIVGDDVLLAGL 184 >gi|315030715|gb|EFT42647.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX4000] Length = 275 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 44/185 (23%), Positives = 84/185 (45%), Gaps = 4/185 (2%) Query: 19 SFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDW-KGFDVDFCRALSSAIFDDPS 76 S S+N ++ + +KK G +K G+ + F + + + +G + D R ++ I Sbjct: 34 SASSNKTVTVEQLKKAGKIKIGVKEDIPNFGYMNPDTNKNEGMEPDIARLIAKEITGSEE 93 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 ++++ + AK R L + ++D++ +T+ E F Y D GF++ K+ Sbjct: 94 NVEFVGVTAKTRGPLLDNGELDMVIAT--FTITDERKKTYNFTTPYYTDEIGFLVRKEDN 151 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 SS+ L G +I V TT+ L + +K+ E+ A + R DA++ Sbjct: 152 FSSMKDLDGKTIGVAQSATTKENLEKKAQEEGIKFTYQELGSYPELKTALTSKRIDAFSV 211 Query: 197 DISAL 201 D S L Sbjct: 212 DKSIL 216 >gi|225858524|ref|YP_002740034.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain protein [Streptococcus pneumoniae 70585] gi|225721173|gb|ACO17027.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain protein [Streptococcus pneumoniae 70585] Length = 286 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 23/228 (10%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + A + + KK G L+ + F V +G ++G+D++ L+ D K++Y Sbjct: 37 TAKARTIDENKKSGELRIAVFGDKKPFDYVDNDGSYQGYDIELGNQLAQ---DLGVKVKY 93 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKKGIS 138 + ++A R L S ++DI N T R ++ L + ++ G + K I+ Sbjct: 94 ISVDAANRAEYLISNKVDITLANFTVTDERKKQVDFALPYMKVSL----GVVSPKTGLIT 149 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP-IVFERVEEIDAAYRA---HRCDAY 194 V QL G ++ V GTT E YF+ K HP I ++ ++ +Y+A R DA+ Sbjct: 150 DVKQLEGKTLIVTKGTTAET----YFE----KNHPEIKLQKYDQYSDSYQALLDGRGDAF 201 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + D + + A L N V + + +A A+ +G+ E + ++ Sbjct: 202 STDNTEVLAWALEN--KGFEVGITSLGDPDTIAAAVQKGNQELLDFIN 247 >gi|241664891|ref|YP_002983251.1| family 3 extracellular solute-binding protein [Ralstonia pickettii 12D] gi|240866918|gb|ACS64579.1| extracellular solute-binding protein family 3 [Ralstonia pickettii 12D] Length = 298 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 49/235 (20%), Positives = 95/235 (40%), Gaps = 7/235 (2%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC----RALSSAIFDD 74 + T + +L I+ G ++ V F+ V G G+ +D C AL A+ Sbjct: 22 ALPTTSPVLDRIRDTGAVRLAYRENSVPFSYVDG-GKPVGYSIDLCSRLVEALKVAVKRA 80 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 IQY+P+ R A+ + D+ +T+ T RE +AF Y ++ Sbjct: 81 DLNIQYVPVTPATRIAAITEGKADLECGSTNNT--RERREKVAFTIPHYIASSRMLVKTS 138 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 GI L+ ++ G+T + A +K + + E A + DA+ Sbjct: 139 SGIHRWEDLNNKTVVSTRGSTNGGQIRAMADARVLKVNVVEARDHTEAFGLVVAGKADAF 198 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 D LY + T+ P+++ ++ ++ +P A + + D E+ ++ M+ Sbjct: 199 AMDDVLLYGFRATSPNPADYTVVGSNLAVAPYAIMLSKDDPEFKKVIDLAMSRMI 253 >gi|257089531|ref|ZP_05583892.1| ABC amino acid transporter [Enterococcus faecalis CH188] gi|256998343|gb|EEU84863.1| ABC amino acid transporter [Enterococcus faecalis CH188] Length = 275 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 44/185 (23%), Positives = 84/185 (45%), Gaps = 4/185 (2%) Query: 19 SFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDW-KGFDVDFCRALSSAIFDDPS 76 S S+N ++ + +KK G +K G+ + F + + + +G + D R ++ I Sbjct: 34 SASSNKTVTVEQLKKAGKIKVGVKEDIPNFGYMNPDTNKNEGMEPDIARLIAKEITGSEE 93 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 ++++ + AK R L + ++D++ +T+ E F Y D GF++ K+ Sbjct: 94 NVKFVGVTAKTRGPLLDNGELDMVIAT--FTITDERKKTYNFTTPYYTDEIGFLVRKEDN 151 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 SS+ L G +I V TT+ L + +K+ E+ A + R DA++ Sbjct: 152 FSSMKDLDGKTIGVAQSATTKENLEKKAQEEGIKFTYQELGSYPELKTALTSKRIDAFSV 211 Query: 197 DISAL 201 D S L Sbjct: 212 DKSIL 216 >gi|161507099|ref|YP_001577053.1| glutamine ABC transporter [Lactobacillus helveticus DPC 4571] gi|160348088|gb|ABX26762.1| Glutamine ABC transporter [Lactobacillus helveticus DPC 4571] Length = 272 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 59/243 (24%), Positives = 104/243 (42%), Gaps = 18/243 (7%) Query: 1 MYKDFFVSILCLIILFFT----SFSTNASILGDIKKRGFLKCGI--NTGLVGFAEVKANG 54 M K FF+ L + I FT S + + +K + G+ +T L G +K G Sbjct: 1 MKKRFFLPTLLIGIALFTLSACSQNKKQIVYQTVKSTKTINWGVKADTPLFGSMNIKT-G 59 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 GF++D +AL+ + + +K ++ A + L+++ +D + T RE + Sbjct: 60 KINGFEIDLAKALTKEMLSNNAKANFVTTTANTKIQLLKNRNVDAVIAAMTITPEREKQV 119 Query: 115 GLAFRPITYFD-GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + +P YF GQ + K I +V L+ + V GTT AD K K Sbjct: 120 DFS-KP--YFPAGQSITVAKNSKIKNVKDLNNKKVLVVKGTTA----ADAVKKFAPKAEI 172 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + F+ + AA +A + DA+ D L + + S + ++ + P A+ +G Sbjct: 173 LQFDDYGQAFAALKAGQGDAFVTDNGILVGILRDS---SGYKLVGGNFTNQPYGIAVNKG 229 Query: 234 DTE 236 TE Sbjct: 230 QTE 232 >gi|229587936|ref|YP_002870055.1| putative ABC transporter substrate-binding protein [Pseudomonas fluorescens SBW25] gi|229359802|emb|CAY46652.1| putative ABC transport system, substrate-binding protein [Pseudomonas fluorescens SBW25] Length = 266 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 66/274 (24%), Positives = 113/274 (41%), Gaps = 32/274 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++L + + A + D +RG LK G V F G GF+ Sbjct: 1 MSKGYCSALLISAVAWIHMGLAQAGAIDDAVRRGALKVGTTPTYVPFEMTDKQGRIVGFE 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + +S A+ +++ + + E LQ+K+ D++ T+ +E +L L F Sbjct: 61 IDLLKVMSQAL---GVELELVTVPYTELVAGLQAKKFDLIGSGM--TVTQERNLKLNFSD 115 Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGAS--ICVQAGTTTELTLADYFKAHNMKYHPIVF 176 GQ ++H + +SSV L AS I GTT E + A + Sbjct: 116 SFIVVGQSVVLHPRLLGKVSSVEDLDDASYRIATTEGTTGEAAARRFLGAARISSFATPE 175 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYAL-KLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 E V ++ A DA+ D A Y L L+ S + L + PLA + +GD Sbjct: 176 EGVRQV----LAGAADAFIHD--APYNLIALSRPENSTLLALEQPFTFEPLAFGLKKGD- 228 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 ++ ++W ++ + NQV++D T Sbjct: 229 --FDSLNWINHFL-------------NQVAQDGT 247 >gi|209526069|ref|ZP_03274601.1| extracellular solute-binding protein family 3 [Arthrospira maxima CS-328] gi|209493457|gb|EDZ93780.1| extracellular solute-binding protein family 3 [Arthrospira maxima CS-328] Length = 282 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 29/115 (25%), Positives = 60/115 (52%), Gaps = 4/115 (3%) Query: 1 MYKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M + + +L LI+ + FT ++ ++L I++ G L+ G+ T V F+ + NG+ +G+ Sbjct: 1 MNQKLAIPLLSLILSVGFTGYAAAETVLEQIERTGVLRAGVRTDAVPFSYLNDNGEIEGY 60 Query: 60 DVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 VD R + + + P +++ + ++RF +Q +D++ T T RE Sbjct: 61 SVDLIRLIHGRLEEKLNQPIRLEMTTVTLQDRFEQVQKGNLDLVCEATSITAERE 115 >gi|51245088|ref|YP_064972.1| glutamine ABC transporter, periplasmic substrate binding protein [Desulfotalea psychrophila LSv54] gi|50876125|emb|CAG35965.1| probable glutamine ABC transporter, periplasmic substrate binding protein [Desulfotalea psychrophila LSv54] Length = 271 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 55/241 (22%), Positives = 104/241 (43%), Gaps = 23/241 (9%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 +++ +++ +F+ + I+K L+ GI + A +W GFDVD + + Sbjct: 10 AVISVMVSGVVAFA--GPVWDKIQKSKTLRAGIMNNSIPGAYYNDKKEWVGFDVDMAKEI 67 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + K++ + + K R LQ +ID+ N T RE + F +FDGQ Sbjct: 68 AKRL---GLKLEQVLVTDKTRIGFLQQGRIDMSIANM--THKRERDKSIDFSITYFFDGQ 122 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK----AHNMKY--HPIVFERVEE 181 + K K + + L G +I GTT+E+ + K A + Y +P F Sbjct: 123 KMLTRKGK-YADWNALVGKTIATVQGTTSEINVKTLMKKMGGAEIVSYQDYPSAFN---- 177 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A + R A++ D + L L P ++ ++ D S+ P + Q +++ + V Sbjct: 178 ---ALQMGRVQAFSTDSTIL--LGYAAQEPGKYELVGDFFSREPYGIGLPQDESQLRDAV 232 Query: 242 S 242 + Sbjct: 233 N 233 >gi|94313505|ref|YP_586714.1| glutamate/aspartate ABC transporter periplasmic solute-binding protein [Cupriavidus metallidurans CH34] gi|93357357|gb|ABF11445.1| glutamate/aspartate transport protein (ABC superfamily, peri_bind) high affinity periplasmic solute-binding protein [Cupriavidus metallidurans CH34] Length = 304 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 57/247 (23%), Positives = 101/247 (40%), Gaps = 18/247 (7%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS----KI 78 + +L I+ G + G + F+ G G+ VD C ++ A + K+ Sbjct: 33 QSPVLDRIRDSGTITLGYRESALPFSFGDDKGQPAGYAVDLCLRVAEAAKEKLGLKTIKV 92 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 ++LPL + R A+ + +D+ TL R+ + AF Y ++ GI Sbjct: 93 RWLPLTPQNRVPAVVNGLVDLDCAPNTNTLERQKQV--AFSVSHYVSTVRMLVRADSGIK 150 Query: 139 SVSQLSGASICVQAGTTTELTL----ADY-FKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 S L G ++ AG+T + + A+Y ++ K H F +E R A Sbjct: 151 SFDDLRGKTVVTSAGSTGDRHVRRLKAEYGYRDVYAKDHGESFLLLE-------TGRAQA 203 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 + D L L+ + PS++VI+ +S A + + D EW +V T T+ + Sbjct: 204 FVMDDVLLAGLRAKSKDPSQYVIVGPALSVEQNALMLSKADPEWKRLVDQTLAKTFTSPD 263 Query: 254 LGITQKN 260 + QK Sbjct: 264 VAAMQKR 270 >gi|222082710|ref|YP_002542075.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221727389|gb|ACM30478.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 262 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 57/256 (22%), Positives = 111/256 (43%), Gaps = 17/256 (6%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L ++ RG L G + + A+ +GFD+D R ++ A+F DP KI+++ + Sbjct: 10 SKLDEVLARGHLVMGTGSTNAPWHFKSADDKLQGFDIDMGRIVAKALFGDPDKIEFVNQS 69 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 + R + + ++D+ + T+ E + +AF Y +G G ++ + + L Sbjct: 70 SDARIPNITTDKVDLTCQFM--TVTGERAQQIAFTIPYYREGVGLMLKADGKYADYAALK 127 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPI---VFERVEEIDAAYRA---HRCDAYTGDI 198 AG++ +++ A M + + ++ E +D Y+A R DA D Sbjct: 128 A------AGSSVTISVLQNVYAEAMVHAALPDATVDQYESVDLIYQALESGRADAVATDQ 181 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 S+L A +T + P + + A + +GD +W N V+ + +T E Sbjct: 182 SSL-AWYMTQN-PGRYKDAGYGWNPQTYACGVKRGDQDWLNFVNTALHEAMTGVEFDFYA 239 Query: 259 KNINQ-VSKDTTNPDV 273 + + KD T P + Sbjct: 240 ASYKKWFGKDLTPPQI 255 >gi|220909135|ref|YP_002484446.1| family 3 extracellular solute-binding protein [Cyanothece sp. PCC 7425] gi|219865746|gb|ACL46085.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7425] Length = 300 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 52/244 (21%), Positives = 110/244 (45%), Gaps = 18/244 (7%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPSKIQYL 81 S+L + K G L G + FA + G+ G+ V+ + ++ + + P K++ + Sbjct: 26 SVLEKVVKSGVLTAGTSKDAFPFAYRDSQGNLTGYSVEMLKLINEQVSKELNQPIKLELV 85 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY-FDGQGFIMHKKKGISSV 140 L+ +ER LQ +DI+ + +T RE + + ++Y G ++ + +S Sbjct: 86 ALDPQERIAKLQQGAVDIVCDFSSFTWKREADVDFS---VSYAITGTRLLVKRNSPLSDP 142 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + L G I V GTT ++ L + + ++F+ + A +A + DA+ D Sbjct: 143 ASLVGKRIGVLPGTTAQVAL----RKAQPQAQIVLFQDRNKAYQAIQAGQIDAFADDDVL 198 Query: 201 L--YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 L + + ND+ + P S +A + + ++ + + V +Y+++ + +TQ Sbjct: 199 LEDWLFRTKNDKTFQVASYP--YSNEGVACMLPENNSTFRDTV---NYSLIRFMQGLLTQ 253 Query: 259 KNIN 262 K N Sbjct: 254 KTPN 257 >gi|220908696|ref|YP_002484007.1| family 3 extracellular solute-binding protein [Cyanothece sp. PCC 7425] gi|219865307|gb|ACL45646.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7425] Length = 259 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 51/223 (22%), Positives = 91/223 (40%), Gaps = 10/223 (4%) Query: 11 CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70 ++L + S A+ L I +RG L + L G +G ++D R L+ Sbjct: 6 VFLLLAWLSLPAQAAELKQILQRGRLIVAVKDNLPPLGFRDQGGQLQGLEIDIARQLAKE 65 Query: 71 IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130 +F + +++ P+ +R A+ + Q D+ N T R + F P YF G G I Sbjct: 66 LFGTETAVEFKPVANVDRLEAVLTGQADLAIANLTATAGRYRLVN--FTPPYYFTGTG-I 122 Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190 + K K + ++ L+ + V G++ L F N+K + +E Sbjct: 123 LTKGKSLQRLTDLNHRPVAVLQGSSAIAQL--RFLLPNVKL--VGVNSYQEAKTKLDRGE 178 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 A D + L + T + + + P ++S PLA A +G Sbjct: 179 VGAVAADSTVLTGWRQTA---TNYYLFPTLLSADPLAIAFPKG 218 >gi|291570910|dbj|BAI93182.1| extracellular solute-binding protein [Arthrospira platensis NIES-39] Length = 282 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 30/115 (26%), Positives = 59/115 (51%), Gaps = 4/115 (3%) Query: 1 MYKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M + +S+L L++ + FT + ++L I + G L+ G+ T V F+ + NGD +G+ Sbjct: 1 MNQKLAISLLSLVLSVGFTGVAGAETVLEQIGRTGVLRAGVRTDAVPFSYLNDNGDIEGY 60 Query: 60 DVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 VD R + + + P +++ + ++RF +Q +D++ T T RE Sbjct: 61 SVDLIRLIHGRLQEKLNQPIRLEMTTVTLQDRFEQVQKGNLDLVCEATSITAERE 115 >gi|227512774|ref|ZP_03942823.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding protein [Lactobacillus buchneri ATCC 11577] gi|227522898|ref|ZP_03952947.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding protein [Lactobacillus hilgardii ATCC 8290] gi|227083974|gb|EEI19286.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding protein [Lactobacillus buchneri ATCC 11577] gi|227089927|gb|EEI25239.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding protein [Lactobacillus hilgardii ATCC 8290] Length = 277 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 59/259 (22%), Positives = 111/259 (42%), Gaps = 22/259 (8%) Query: 5 FFVSILCLIILFFTSFSTNAS---ILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGF 59 V++L +++ ST+ S +L D K+ + G+ +T L G +VK N KGF Sbjct: 10 LVVALLIMVVSLGACSSTSGSKRDVLKDDKQSNTITWGVKADTKLFGLMDVKDN-QIKGF 68 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 +VD +A++ I K +++ + ++ R L + ID + T R + + Sbjct: 69 EVDLAKAMTKEILGKKGKARFIQVTSQTRMPLLANGNIDAIMATMTITPQRAEQVDFSR- 127 Query: 120 PITYFD-GQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 +YFD GQ ++ I +V L+ GA + G+ + K K + Sbjct: 128 --SYFDAGQAILVKDGSPIKNVRSLNRKGAVVLGVVGSNS----VQNIKKFAPKARVLQL 181 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + A ++ + DA T D LY + + N P + ++ +K P A +G Sbjct: 182 SDYSQALTALKSGQGDALTTDNGILYGMSIEN--PG-YSVVGGTFTKEPYGIATAKGQRP 238 Query: 237 WYNIVSWTHYAMVTAEELG 255 ++N + ++A+ E G Sbjct: 239 FHNAI---NHALTKVENSG 254 >gi|120612399|ref|YP_972077.1| extracellular solute-binding protein [Acidovorax citrulli AAC00-1] gi|120590863|gb|ABM34303.1| amino acid ABC transporter substrate-binding protein, PAAT family [Acidovorax citrulli AAC00-1] Length = 302 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 46/172 (26%), Positives = 75/172 (43%), Gaps = 12/172 (6%) Query: 30 IKKRGFLKCG--INTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 IK+ G L+ G + L K +G +GFD + ++ I D SK+Q+ +N+ Sbjct: 60 IKQAGTLRLGGTQTSNLFSLLNEK-DGKLRGFDAGLAQLITRYILGDASKVQFTQVNSST 118 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSG 145 R L + Q+D++ T R + A Y+ Q ++ K + I SV+ L G Sbjct: 119 REQVLINGQVDMVVATYSITPARAEKISFAG---PYYTSQAGVLVKASNQAIQSVNDLGG 175 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + QAG+T LA + ++ F+ +E A R R AY D Sbjct: 176 RKVATQAGSTGPAILAQFAPKSTVQE----FQTHQEALDALRQGRVAAYVTD 223 >gi|29831920|ref|NP_826554.1| amino acid ABC transporter solute-binding protein [Streptomyces avermitilis MA-4680] gi|29609037|dbj|BAC73089.1| putative polar amino acid ABC transporter substrate-binding protein [Streptomyces avermitilis MA-4680] Length = 335 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 13/159 (8%) Query: 30 IKKRGFLKCGINT-----GLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP-SKIQYLPL 83 IKKRG+L G++ G K D +GFD+D ++ I P + +++ + Sbjct: 83 IKKRGYLSVGVDQNSYRWGYRDPNSTKKGSDLEGFDIDLAHRIADEILGKPNADVRFHAI 142 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ- 142 +R A++S Q+D++ R T R +AF + GQ + KK GI+ + Sbjct: 143 PTNQRIEAIRSGQVDMVVRTMTITCKRLAD--VAFSDPYFRTGQQVLAPKKSGITGYDKS 200 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 L+ IC A +T TL KA + +V R+ E Sbjct: 201 LAHKRICTAASSTAFDTLTADRKAGRL----VVSARMSE 235 >gi|295700116|ref|YP_003608009.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] gi|295439329|gb|ADG18498.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] Length = 300 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 55/243 (22%), Positives = 98/243 (40%), Gaps = 11/243 (4%) Query: 19 SFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDD 74 +F+ +A S L I++ G + G V F+ V AN D GF D C + A+ Sbjct: 22 AFAQDATSTLAKIQQSGVIAIGHRETSVPFSYVDANNDVIGFSQDLCNKIIDAVKAKTKH 81 Query: 75 PS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIM 131 P K++++P+ ++ R +Q+ +D+ T R +++ G F + + Sbjct: 82 PDLKVRFIPVTSQNRIPLVQNGTVDLECGVTTNLAARQSQVTFGDTF----FVATTRLLT 137 Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191 K GI L+G ++ GTT+E L + M I + E + R Sbjct: 138 RKDSGIKDFPDLAGKTVVTNQGTTSERILRKMNEDKKMNMQIISAKDYGEGRLTLESGRA 197 Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 AY D L + +PS+ +I S + + D E+ +V T ++ Sbjct: 198 VAYMMDDVLLAGTRTLTAKPSDWIITGTPQSSEAYGFMLRRDDPEFRKLVDDTLEQVMKG 257 Query: 252 EEL 254 E+ Sbjct: 258 PEI 260 >gi|255973158|ref|ZP_05423744.1| amino acid ABC transporter [Enterococcus faecalis T1] gi|255964176|gb|EET96652.1| amino acid ABC transporter [Enterococcus faecalis T1] Length = 275 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 42/185 (22%), Positives = 82/185 (44%), Gaps = 3/185 (1%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW-KGFDVDFCRALSSAIFDDPS 76 ++ S + + +KK G +K G+ + F + + + +G + D R ++ I Sbjct: 34 SASSNKTATVEQLKKAGKIKVGVKEDIPNFGYMNPDTNKNEGMEPDIARLIAKEITGSEE 93 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 ++++ + AK R L + ++D++ +T+ E F Y D GF++ K+ Sbjct: 94 NVEFVGVTAKTRGPLLDNGELDMVIAT--FTITDERKKTYNFTTPYYTDEIGFLVRKEDN 151 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 SS+ L G +I V TT+ L + +K+ E+ A + R DA++ Sbjct: 152 FSSMKDLDGKTIGVAQSATTKENLEKKAQEEGIKFTYQELGSYPELKTALTSKRIDAFSV 211 Query: 197 DISAL 201 D S L Sbjct: 212 DKSIL 216 >gi|332111811|gb|EGJ11791.1| extracellular solute-binding protein [Rubrivivax benzoatilyticus JA2] Length = 295 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 54/241 (22%), Positives = 109/241 (45%), Gaps = 7/241 (2%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD----DPS 76 + A L IK+ G + G+ G + +G + G+ +D C+ + S I Sbjct: 16 AVQADTLSKIKETGTVTMGVRES-SGLSYTLGDGKFVGYHIDVCQKVLSDIRKKLGLSSL 74 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 I+Y P+ ++ R +Q+ +DI +T + R+ + AF T+ + + G Sbjct: 75 TIKYQPVTSQNRIPLVQNGTVDIECGSTTNNVARQKDV--AFAVTTFVEEVRIAVKADSG 132 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 I+S++QL G ++ GTT+ TL + +A+ + + + + + + R DA+ Sbjct: 133 INSIAQLVGKTVATTTGTTSVQTLRKHERANGVDFKEVYGKDHADSFLLLESGRADAFVM 192 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 D S L T+ P+ I+ +++S P+A + + D + V + A + + +L Sbjct: 193 DGSILAKNIATSKNPAGFKIVGEVLSVEPIAIMLRKDDAAFKAAVDESIKAQIKSGDLAK 252 Query: 257 T 257 T Sbjct: 253 T 253 >gi|183602357|ref|ZP_02963723.1| probable solute-binding protein for glutamate/aspartate ABC transporter system [Bifidobacterium animalis subsp. lactis HN019] gi|219683328|ref|YP_002469711.1| solute-binding protein for glutamate/aspartate ABC transporter system [Bifidobacterium animalis subsp. lactis AD011] gi|241191289|ref|YP_002968683.1| amino acid ABC transporter periplasmic component [Bifidobacterium animalis subsp. lactis Bl-04] gi|241196695|ref|YP_002970250.1| amino acid ABC transporter periplasmic protein [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183218276|gb|EDT88921.1| probable solute-binding protein for glutamate/aspartate ABC transporter system [Bifidobacterium animalis subsp. lactis HN019] gi|219620978|gb|ACL29135.1| probable solute-binding protein for glutamate/aspartate ABC transporter system [Bifidobacterium animalis subsp. lactis AD011] gi|240249681|gb|ACS46621.1| ABC-type amino acid transport system periplasmic component [Bifidobacterium animalis subsp. lactis Bl-04] gi|240251249|gb|ACS48188.1| ABC-type amino acid transport system periplasmic component [Bifidobacterium animalis subsp. lactis DSM 10140] gi|289177405|gb|ADC84651.1| Glutamine-binding protein [Bifidobacterium animalis subsp. lactis BB-12] gi|295794282|gb|ADG33817.1| ABC-type amino acid transport system periplasmic component [Bifidobacterium animalis subsp. lactis V9] Length = 302 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 60/231 (25%), Positives = 101/231 (43%), Gaps = 21/231 (9%) Query: 18 TSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 T STNA L +IKK G L+ + + F V +G + G+D++F +AL+ + P Sbjct: 45 TQNSTNAKARTLDEIKKSGELRVAVFSDKAPFGYVDKDGKYAGYDIEFAQALADGLGVKP 104 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 Y ++ R L S ++D+ N +T E + + F G + Sbjct: 105 V---YTSVDPAARVDVLASNKVDVTLAN--FTETPERAEKVDFSKPYMKVALGIVAPDAA 159 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP-IVFERVEEIDAAYRA---HRC 191 I V L+G ++ V GTT E YF+ K HP I ++ ++ AY A R Sbjct: 160 PIKDVKDLNGKTLIVAKGTTAET----YFE----KNHPEIKLQKYDQYADAYNALLDGRG 211 Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 DA + D + + A N V + +I +A A+ +G+ E + ++ Sbjct: 212 DAMSTDNTEVLAWAKAN--KGYRVDVTEIGDVDVIAAAVQKGNKELLDYIN 260 >gi|121602131|ref|YP_988959.1| putative glutamate/aspartate ABC transporter, permease protein/periplasmic glutamate/aspartate-binding protein [Bartonella bacilliformis KC583] gi|120614308|gb|ABM44909.1| putative glutamate/aspartate ABC transporter, permease protein/periplasmic glutamate/aspartate-binding protein [Bartonella bacilliformis KC583] Length = 460 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 53/204 (25%), Positives = 88/204 (43%), Gaps = 6/204 (2%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPSKIQYLPL 83 L IK+ G + G+ G A NG + GF + + + I P +I+YLP+ Sbjct: 186 LERIKQTGRITLGVRES-SGLAYALGNGRYTGFHTEMAENIINDISKKIGKPIRIRYLPI 244 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 ++ R LQ+ D +T R S+ A+ TY + + K GI S+ L Sbjct: 245 TSQNRIPLLQNNTYDFECGSTTNDTARGRSVAFAY--TTYVEEVRIAVKKDSGIKSIQDL 302 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 +G +I GTT + +A N+ + I + + R DA+ D S L Sbjct: 303 NGKTIATTTGTTAVQLIRQNGRAKNINFRVINGRDHADSFLLLESGRADAFIMDSSILAG 362 Query: 204 LKLTNDRPSEHVILPDIISKSPLA 227 + PS+++IL ++S P+A Sbjct: 363 SISRSRNPSDYMILDAVLSVEPIA 386 >gi|154148664|ref|YP_001406796.1| amino acid [Campylobacter hominis ATCC BAA-381] gi|153804673|gb|ABS51680.1| amino acid [Campylobacter hominis ATCC BAA-381] Length = 268 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 43/163 (26%), Positives = 80/163 (49%), Gaps = 11/163 (6%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 IL L I F F + L IK++G + G+ F E +G ++GF++D +++ Sbjct: 5 ILVLGICFCALFGDS---LDQIKQKGVFRVGVYESQPPF-EKFVDGKFEGFEIDLANSIA 60 Query: 69 SAIF-DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 +F ++ ++++ + AK+R ALQ +ID + N +T+ E + + F + Sbjct: 61 KDLFGENGGTVEFVIITAKDRIPALQQNKIDAVIAN--YTVTDERAKSVDFTMPYFAVNT 118 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 G + K I+S +L I + GTTTE +Y + ++ K Sbjct: 119 GILTRKNDNITSPLELRDTPIICEKGTTTE----EYLQKNDFK 157 >gi|213970375|ref|ZP_03398504.1| glutamine/glutamate ABC transporter, periplasmic glutamine/glutamate-binding protein [Pseudomonas syringae pv. tomato T1] gi|301381158|ref|ZP_07229576.1| glutamine/glutamate ABC transporter, periplasmic glutamine/glutamate-binding protein [Pseudomonas syringae pv. tomato Max13] gi|302063124|ref|ZP_07254665.1| glutamine/glutamate ABC transporter, periplasmic glutamine/glutamate-binding protein [Pseudomonas syringae pv. tomato K40] gi|302132571|ref|ZP_07258561.1| glutamine/glutamate ABC transporter, periplasmic glutamine/glutamate-binding protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213924846|gb|EEB58412.1| glutamine/glutamate ABC transporter, periplasmic glutamine/glutamate-binding protein [Pseudomonas syringae pv. tomato T1] Length = 290 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 57/226 (25%), Positives = 97/226 (42%), Gaps = 19/226 (8%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 S + S L IK R L G+ + F V G + GFD D + + + D K+++ Sbjct: 35 SPSTSYLETIKARDKLIVGVFSDKPPFGFVNEQGQYVGFDTDLGKRFAKDLLGDEKKVEF 94 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + + R LQS ++D++ N T+ E S + F ++ + + ++ Sbjct: 95 VVVEPASRIPFLQSDKVDLILANM--TVTPERSEAVDFTHPNLRVAVQALVPEASPVKTL 152 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHP----IVFERVEEIDAAYRAHRCDAYTG 196 L+ + V GTT ++ L K HP + FE+ E A R DAY Sbjct: 153 DDLASKTTIVTTGTTADIWLT--------KNHPDWKVLKFEKNSESLQALANGRGDAYAQ 204 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE---WYN 239 D L++ N P V+ + ++P+APA+ +G+ E W N Sbjct: 205 DNLVLFSWAKKN--PGYRVLEQKLGDEAPIAPAVKKGNIELRDWVN 248 >gi|227509837|ref|ZP_03939886.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190761|gb|EEI70828.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 277 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 59/259 (22%), Positives = 111/259 (42%), Gaps = 22/259 (8%) Query: 5 FFVSILCLIILFFTSFSTNAS---ILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGF 59 V++L +++ ST+ S +L D K+ + G+ +T L G +VK N KGF Sbjct: 10 LVVALLIMVVSLGACSSTSGSKRDVLKDDKQSNTITWGVKADTKLFGLMDVKDN-QIKGF 68 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 +VD +A++ I K +++ + ++ R L + ID + T R + + Sbjct: 69 EVDLAKAMTKEILGKKGKARFIQVTSQTRMPLLANGNIDAIMATMTITPQRAEQVDFSR- 127 Query: 120 PITYFD-GQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 +YFD GQ ++ I +V L+ GA + G+ + K K + Sbjct: 128 --SYFDAGQAILVKDGSPIKNVRDLNRKGAVVLGVVGSNS----VQNIKKFAPKARVLQL 181 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + A ++ + DA T D LY + + N P + ++ +K P A +G Sbjct: 182 SDYSQALTALKSGQGDALTTDNGILYGMSIEN--PG-YSVVGGTFTKEPYGIATAKGQRP 238 Query: 237 WYNIVSWTHYAMVTAEELG 255 ++N + ++A+ E G Sbjct: 239 FHNAI---NHALTKVENSG 254 >gi|56478019|ref|YP_159608.1| putative ABC transporter, glutamate receptor [Aromatoleum aromaticum EbN1] gi|56314062|emb|CAI08707.1| putative ABC transporter, glutamate receptor [Aromatoleum aromaticum EbN1] Length = 298 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 55/260 (21%), Positives = 106/260 (40%), Gaps = 10/260 (3%) Query: 1 MYKDFFVSILCLII--LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M+K V LCL + + + ++ L IK G + G V F+ + AN G Sbjct: 1 MHKSLTVIALCLSAAGMVAPAHAQSSGTLQKIKDTGTITVGHRESSVPFSYLDANQKPVG 60 Query: 59 FDVDFCRALSSAIFDD---PS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + +D C + A+ + P+ +++Y P+ ++ R +Q+ ID+ +T ++ R+ + Sbjct: 61 YAMDLCAKVVDAVKTELKMPNLQVKYQPVTSQNRIPLMQNGTIDLECGSTTNSVARQQQV 120 Query: 115 GLAFRPITYF-DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 G + + YF + K GI + L G + GTT++ + K + Sbjct: 121 GFS---VAYFITSVRMGVRKDSGIDDIGDLDGKPVVTTTGTTSDELIKQNEKGRTINVKN 177 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + + + R A+ D L L + PS I+ + P + + Sbjct: 178 IYGKDHADSFLMVDSGRAAAFVMDDILLAGLIANSKNPSAFEIVGPSLRDEPYGVMVRKD 237 Query: 234 DTEWYNIVSWTHYAMVTAEE 253 D + IV T ++ + E Sbjct: 238 DAPFKAIVDKTLVGLMKSGE 257 >gi|307316501|ref|ZP_07595944.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti AK83] gi|306897699|gb|EFN28442.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti AK83] Length = 268 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 45/162 (27%), Positives = 75/162 (46%), Gaps = 9/162 (5%) Query: 8 SILCLIILFFTSFST--NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 S+L ++ T+ ++ +A L DI G L+C + N + GFDVD+C Sbjct: 4 SVLAFGLVAATALTSPAHADKLDDIIASGTLRCAVVLDFPPMGSRDENNEPIGFDVDYCN 63 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 L+ A+ ++I P ER AL S ++D+ +T TL R ++G+ + YF Sbjct: 64 DLARAL-GVTAEIVETPF--PERIPALMSGRVDVGVASTSDTLERAKTVGMT---VPYFA 117 Query: 126 GQ-GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 + ++K GI S + G + AGT + L + KA Sbjct: 118 FEMAVTANEKSGIKSFEDMKGKVVGATAGTYEAIALENQVKA 159 >gi|158320976|ref|YP_001513483.1| diguanylate cyclase/phosphodiesterase [Alkaliphilus oremlandii OhILAs] gi|158141175|gb|ABW19487.1| diguanylate cyclase/phosphodiesterase [Alkaliphilus oremlandii OhILAs] Length = 737 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 48/189 (25%), Positives = 94/189 (49%), Gaps = 14/189 (7%) Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G++KGF+VD ALS + D I+++P+N +E AL++K++D++ + +E Sbjct: 45 GNYKGFNVDIINALSIELGMD---IEFIPMNWREALRALENKEVDVIQGMSSTEERKEKY 101 Query: 114 LGLAFRPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 L F T + Q F++ + + LSG + QAG E LAD ++ Sbjct: 102 L---FTIPTVTNSQSIFVLKDTSIVFGLEDLSGMKVAFQAGDLNEEILAD---IPDITLL 155 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGD-ISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 P ++ E +D+ DAY G+ ++ L+ L+ + + + ++ + ++ S PA Sbjct: 156 PKK-DQNEAMDSLING-EADAYVGNRLTGLFYLQKSKNSSTVKIV-GEQMATSEYGPATY 212 Query: 232 QGDTEWYNI 240 +G+ E ++ Sbjct: 213 RGNEELVHL 221 >gi|302537785|ref|ZP_07290127.1| glutamate binding periplasmic protein [Streptomyces sp. C] gi|302446680|gb|EFL18496.1| glutamate binding periplasmic protein [Streptomyces sp. C] Length = 301 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 16/209 (7%) Query: 31 KKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 +KRG L G+ E A+G + GFD++ + +++++ DP I++ + + R Sbjct: 57 RKRGRLVVGVKEDQPYMGEKDPASGRYSGFDIEIAKMMAASLGFDPKTIEFKTIASANRE 116 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYF-DGQGFIMHK-KKGISSVSQLSGAS 147 ALQ+ QID R+ +G A YF GQ ++ + +K I L+G Sbjct: 117 TALQNGQIDYYVGTYTINDNRKKQVGFAG---PYFMAGQSLLVRRNEKDIKGPEDLAGKK 173 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL--YALK 205 +C AG+T L F + + ++ ++ DA + D S L YA K Sbjct: 174 VCSAAGSTPYQRLQREFPKAVL----VAYDTYSVCVDNLLTYQVDAVSTDDSILLGYAAK 229 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + P E ++ + SK P + +GD Sbjct: 230 V----PEELKVVGEPFSKEPYGIGVPRGD 254 >gi|330969980|gb|EGH70046.1| extracellular solute-binding protein [Pseudomonas syringae pv. aceris str. M302273PT] Length = 262 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 58/226 (25%), Positives = 93/226 (41%), Gaps = 19/226 (8%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 S ++S L IK R L G+ + F V G + GFD D + + + D K+++ Sbjct: 7 SPSSSYLETIKARDKLIVGVFSDKPPFGFVNEQGQYVGFDTDLGKRFAKDLLGDEKKVEF 66 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + + R LQS ++D++ N T R ++ P Q + S V Sbjct: 67 VVVEPASRIPFLQSDKVDLILANMTVTPERREAVDFT-HPNLRVAVQALVPQ----ASPV 121 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHP----IVFERVEEIDAAYRAHRCDAYTG 196 L + + T T AD + N HP + FE+ E A R DAY Sbjct: 122 KTLD--DLASKTTIVTTGTTADIWLTKN---HPDWKVLKFEKNSESLQALANGRGDAYAQ 176 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE---WYN 239 D L++ N P V+ + ++P+APA+ +G+ E W N Sbjct: 177 DNLVLFSWAKKN--PGYRVLEQKLGDEAPIAPAVKKGNIELRDWVN 220 >gi|91790186|ref|YP_551138.1| extracellular solute-binding protein [Polaromonas sp. JS666] gi|91699411|gb|ABE46240.1| amino acid ABC transporter substrate-binding protein, PAAT family [Polaromonas sp. JS666] Length = 303 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 53/242 (21%), Positives = 97/242 (40%), Gaps = 8/242 (3%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 VS+ + L S++ A L ++ L G +G + F+ + G G+ +D C+ Sbjct: 5 IVSLAVALFLCAGSWTVEADTLDKVRVSKALHLGHRSGSIPFSYLGNTGQPIGYAIDLCK 64 Query: 66 ALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 L++AI + +I ++P+ ER AL ID+ D T+ + +AF Sbjct: 65 HLAAAIAKEIRQPEMQIVWIPIGPNERNSALMDGLIDL--DCGDSTVTAQSQKVIAFSIP 122 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y G ++ K I+ + LSG + + E L + +V + Sbjct: 123 IYLAGTRLLVPKAASIAEIGTLSGMKVVTTTQSGNEAMLRHVLGQTGVTADVVVARTAKA 182 Query: 182 IDAAYRAHRCDAYTGDISALYALK-LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A D + L+ ++ LT D+ ++ LP S P A A + D + Sbjct: 183 ATEVLTTGQAQALFADDATLFGIRNLTKDQ-AQFTTLPKTYSLRPKALAYRKDDERLRTL 241 Query: 241 VS 242 V+ Sbjct: 242 VT 243 >gi|139439419|ref|ZP_01772860.1| Hypothetical protein COLAER_01880 [Collinsella aerofaciens ATCC 25986] gi|133775198|gb|EBA39018.1| Hypothetical protein COLAER_01880 [Collinsella aerofaciens ATCC 25986] Length = 291 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 47/191 (24%), Positives = 80/191 (41%), Gaps = 12/191 (6%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSK-- 77 S S L IK RG L G+ + G+ A G ++G +VD C +++A+F K Sbjct: 44 SDKGSKLAAIKSRGHLNAGVKKDVPGYGYYDTAKGRFEGMEVDLCYQIAAAVFGVSYKEA 103 Query: 78 -----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 +++ + K R + + Q+D+++ +T+ E F D G ++ Sbjct: 104 RAQELVEFTDVTPKTRGPLIDNGQLDVVAAT--YTITDERKKSWDFSTPYRTDYVGLMVK 161 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP--IVFERVEEIDAAYRAHR 190 K+ G +S+ L G I V G TT+ + K + P F I ++ A Sbjct: 162 KRSGFTSIEDLDGKVIGVSQGATTQSLIEQMIKDNGFSCKPEFRAFSGYPIIKSSLDAGN 221 Query: 191 CDAYTGDISAL 201 D + D S L Sbjct: 222 IDVFAMDRSTL 232 >gi|330820727|ref|YP_004349589.1| extracellular solute-binding protein [Burkholderia gladioli BSR3] gi|327372722|gb|AEA64077.1| extracellular solute-binding protein [Burkholderia gladioli BSR3] Length = 273 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 63/226 (27%), Positives = 94/226 (41%), Gaps = 17/226 (7%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 +A L DIK+ G L+ F V A+ G DVD+ RAL+ + K++ Sbjct: 25 HADRLDDIKQAGVLRVATFDSNPPFGYVDPASNHIVGLDVDYARALADKLG---VKLELQ 81 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 N R L S+++D++ N +T+ E + + F I YF + KK + S Sbjct: 82 STNPANRIPFLTSRKVDLVLAN--FTITDERAKQVDFS-IPYFSSGQQFLAKKGVLKSKD 138 Query: 142 QLSGASICVQAGTTTELTLADYF-KAHNMKYH--PIVFERVEEIDAAYRAHRCDAYTGDI 198 QL G I GTT E+ + + F KA + Y P F AA RA A T D Sbjct: 139 QLDGLRIGADKGTTNEIAVREQFPKATVVAYDDTPFAF-------AALRAGNVQAITQDG 191 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 L L ++ I P I+ + I +G+ V+ T Sbjct: 192 PKLVGLLANVPDKQKYEIPPFTITNDYMGVGIPKGEPRLVAFVNDT 237 >gi|239941192|ref|ZP_04693129.1| putative ABC transporter solute-binding protein [Streptomyces roseosporus NRRL 15998] gi|239987666|ref|ZP_04708330.1| putative ABC transporter solute-binding protein [Streptomyces roseosporus NRRL 11379] Length = 344 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 36/131 (27%), Positives = 67/131 (51%), Gaps = 10/131 (7%) Query: 30 IKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 IK+RG L G+ N+ G+ + +GD +GFD+D RA++ + DP + + + + Sbjct: 84 IKERGKLIAGVDQNSFRWGYRNPE-SGDLEGFDIDLVRAIADDLLGDPDAVIFRAIPTNQ 142 Query: 88 RFLALQSKQIDILSRNT--DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV-SQLS 144 R AL++ ++D++ R + L ++S A+ + GQ + K+ I+ S L Sbjct: 143 RIAALENDRVDVVVRTMTINCKRLEQVSFSTAY----FQAGQQVLAPKESPITGYDSSLK 198 Query: 145 GASICVQAGTT 155 G +C G+T Sbjct: 199 GKRVCSAEGST 209 >gi|33591939|ref|NP_879583.1| extracellular solute-binding protein [Bordetella pertussis Tohama I] gi|33571583|emb|CAE41071.1| probable extracellular solute-binding protein [Bordetella pertussis Tohama I] Length = 304 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 49/222 (22%), Positives = 89/222 (40%), Gaps = 6/222 (2%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR----ALSSAIFDDPSKIQYLP 82 L I G + G + F+ AN G+ +D C A+ + I D +++YLP Sbjct: 31 LKKISDTGVITIGHRETSIPFSYYDANQKPVGYSIDICTRIVDAVKTRIKRDDIQVKYLP 90 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + + R + + ID+ +T TL + +AF T+ G FI K + ++ Sbjct: 91 VTSATRIPLMGNGTIDLECASTSNTL--DCQKQVAFSVTTFVTGNRFISLKSANLKTIDD 148 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G ++ +GT + +A ++ + + E R A+ D LY Sbjct: 149 LKGKTVASTSGTANIRQANEINEARSLGMKVVPVKEHAEGFLMVETGRAAAFIMDDILLY 208 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 L P + + D +S P A + + D ++ +V T Sbjct: 209 GLAANAKEPDRYQVSGDSLSIEPYAIMLRRDDPQFKALVDDT 250 >gi|296132709|ref|YP_003639956.1| extracellular solute-binding protein family 3 [Thermincola sp. JR] gi|296031287|gb|ADG82055.1| extracellular solute-binding protein family 3 [Thermincola potens JR] Length = 260 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 63/244 (25%), Positives = 104/244 (42%), Gaps = 27/244 (11%) Query: 3 KDFFVSILCLIILFF----TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 K F +SIL L +LF T +T S D+K K G + F V +G+ +G Sbjct: 6 KIFVLSILALSLLFAVGCGTKATTEESKGEDVKT---YKVGTDAAYAPFESVAPSGEIEG 62 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD RA++ A + +++++ + F +L+ Q DI+ T R+ + + Sbjct: 63 FDVDIMRAIAKA---EGFEVEFVNTAWEGIFASLKG-QNDIVISAVTITDDRKKEMDFS- 117 Query: 119 RPITYFDGQGFI-MHKKKGISSVSQLSGASICVQAGTTTELTLA-----DYFKAHNMKYH 172 P YF+ +I + K I+S++ L G + VQ GTT + L DY K Sbjct: 118 EP--YFESTNYIAVPKDSNIASLNDLKGKVVAVQEGTTGDEALTKFLGKDYRNIKRFKGT 175 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 P F + R + DA D + N + ++ + K A+ + Sbjct: 176 PEAFLEL-------RNGKADAAVADSGVVANYVKNNPDANLKIVKDETFPKEYYGIAVAK 228 Query: 233 GDTE 236 G+TE Sbjct: 229 GNTE 232 >gi|330981319|gb|EGH79422.1| extracellular solute-binding protein [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 283 Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 56/248 (22%), Positives = 104/248 (41%), Gaps = 21/248 (8%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 +L T + S L + KRG L G + + A+G +GFD+D R ++ +F+ Sbjct: 20 MLANTVQAAEGSKLDAVLKRGNLVVGTGSTNAPWHFQGADGKLQGFDIDIGRIIAKGLFN 79 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIM 131 DPSK++++ ++ R L + ++DI + T R +++ L + Y +G ++ Sbjct: 80 DPSKVEFVVQSSDARIPNLLTDKVDISCQFITVTASRAQQVASTLPY----YREGVALLL 135 Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA------A 185 + L AG + + A + + + +V++ D+ A Sbjct: 136 PANSKYKEIDDLKA------AGDDVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLMYQA 189 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT- 244 + R D D S++ L + N P + S A A+ +GD +W N V+ Sbjct: 190 INSGRADTAATDQSSVKYLMVQN--PGRYRSPAFAWSPQTYACAVKRGDQDWLNFVNTAL 247 Query: 245 HYAMVTAE 252 H AM E Sbjct: 248 HEAMTGVE 255 >gi|256026691|ref|ZP_05440525.1| solute-binding protein for glutamate_aspartate ABC transporter system [Fusobacterium sp. D11] gi|260495454|ref|ZP_05815580.1| ABC superfamily ATP binding cassette transporter binding protein [Fusobacterium sp. 3_1_33] gi|289764686|ref|ZP_06524064.1| ABC-type amino acid transport/signal transduction system [Fusobacterium sp. D11] gi|260196991|gb|EEW94512.1| ABC superfamily ATP binding cassette transporter binding protein [Fusobacterium sp. 3_1_33] gi|289716241|gb|EFD80253.1| ABC-type amino acid transport/signal transduction system [Fusobacterium sp. D11] Length = 293 Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 19/193 (9%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + A + +IK G +K G+ T F V NG +G+DV F L+ D K++Y Sbjct: 42 TAKARTVQEIKDSGVIKIGVFTDKAPFGYVDENGKNQGYDVYFTNRLAK---DLGVKVEY 98 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKKGIS 138 + L+ R ++ + DI++ N T R ++ L + ++ G + K I Sbjct: 99 ISLDPASRVEYAETGKADIVAANFTVTPERAEKVDFSLPYMKVSL----GVVSPDKAVIK 154 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA---HRCDAYT 195 S+ +L ++ V GTT A+Y+ + N Y + ++ + AY A R DA++ Sbjct: 155 SIDELKDKTLIVSKGTT-----AEYYFSKN--YPEVKLQKYDSYADAYNALLDGRGDAFS 207 Query: 196 GDISALYALKLTN 208 D + + A N Sbjct: 208 TDNTEVLAWAKAN 220 >gi|163759017|ref|ZP_02166103.1| probable amino acid ABC transporter, substrate-binding protein [Hoeflea phototrophica DFL-43] gi|162283421|gb|EDQ33706.1| probable amino acid ABC transporter, substrate-binding protein [Hoeflea phototrophica DFL-43] Length = 262 Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 53/225 (23%), Positives = 99/225 (44%), Gaps = 29/225 (12%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L DI + G +K GI F + A G+++G+DVD + ++ + D I+ +P+ +K Sbjct: 27 LSDILEAGTIKIGIPESFPPFGSLGAEGEYEGYDVDVAKLIAEDLGID---IELVPVTSK 83 Query: 87 ERFLALQSKQIDIL--SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 +R L++ ++D++ S + + I A+ P +F G ISS++ L+ Sbjct: 84 QRIPFLETDRVDLIISSMGANPERAKSIWFSSAYAP--FFSGA--FASTDMAISSMADLA 139 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY-TGDISAL-- 201 G + V G+ ++ L + E E I A AY +G + L Sbjct: 140 GKKVGVTGGSLEDIELTENSP-----------EGTEIIRFGDNAATLSAYVSGQVDVLVT 188 Query: 202 ---YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT---EWYNI 240 A +++ D P + II +SP + +G+ +W N+ Sbjct: 189 GNTVAAQVSADNPDLSMETKFIIKESPAFIGVKKGNVDLLQWVNV 233 >gi|320007608|gb|ADW02458.1| extracellular solute-binding protein family 3 [Streptomyces flavogriseus ATCC 33331] Length = 304 Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 40/144 (27%), Positives = 69/144 (47%), Gaps = 5/144 (3%) Query: 31 KKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 +KRG+L G E A G + GFD++ R +++++ +P I++ + + R Sbjct: 60 EKRGYLVVGAKEDQPYLGEKDPATGVYSGFDIEIARMMAASLGFEPDTIRFRTIASANRE 119 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASI 148 ALQ+ QID +R+ +G A Y GQG ++ + I L+G ++ Sbjct: 120 TALQNGQIDYYVGTYTINDMRKKLVGFAGP--YYMAGQGLLVRTDENDIHGPQDLAGKTV 177 Query: 149 CVQAGTTT-ELTLADYFKAHNMKY 171 C AG+T + ADY +A + Y Sbjct: 178 CSAAGSTPYQRIAADYPEADLVAY 201 >gi|66046172|ref|YP_236013.1| extracellular solute-binding protein [Pseudomonas syringae pv. syringae B728a] gi|63256879|gb|AAY37975.1| extracellular solute-binding protein, family 3 [Pseudomonas syringae pv. syringae B728a] Length = 290 Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 58/226 (25%), Positives = 93/226 (41%), Gaps = 19/226 (8%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 S ++S L IK R L G+ + F V G + GFD D + + + D K+++ Sbjct: 35 SPSSSYLETIKARDKLIVGVFSDKPPFGFVNEQGQYVGFDTDLGKRFAKDLLGDEKKVEF 94 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + + R LQS ++D++ N T R ++ P Q + S V Sbjct: 95 VVVEPASRIPFLQSDKVDLILANMTVTPERREAVDFT-HPNLRVAVQALVPQ----ASPV 149 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHP----IVFERVEEIDAAYRAHRCDAYTG 196 L + + T T AD + N HP + FE+ E A R DAY Sbjct: 150 KTLD--DLASKTTIVTTGTTADIWLTKN---HPDWKVLKFEKNSESLQALANGRGDAYAQ 204 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE---WYN 239 D L++ N P V+ + ++P+APA+ +G+ E W N Sbjct: 205 DNLVLFSWAKKN--PGYRVLEQKLGDEAPIAPAVKKGNIELRDWVN 248 >gi|49475801|ref|YP_033842.1| amino-acid ABC transporter binding protein [Bartonella henselae str. Houston-1] gi|49238608|emb|CAF27849.1| Amino-acid ABC transporter binding protein [Bartonella henselae str. Houston-1] Length = 303 Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 59/230 (25%), Positives = 93/230 (40%), Gaps = 14/230 (6%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F++ II L IKK G + G+ G NG + GF + Sbjct: 7 IFIAATTTIIGLIGIAKAENDTLEKIKKTGEVTLGVRES-SGLGYALGNGKYVGFHTE-- 63 Query: 65 RALSSAIFDD-------PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 ++ I DD P KI YLP+ ++ R LQ+ D +T + R S A Sbjct: 64 --MAEHIIDDISKKIGKPIKIHYLPITSQNRIPLLQNNTYDFECGSTTNDIFR--SKEAA 119 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F TY + + K I S+ L+G +I GTT + +A N+ + + + Sbjct: 120 FAYTTYVEEVRIAVKKNSNIKSLEDLNGKTIATTTGTTAVQLIRKNKRAKNINFKVVKGK 179 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 + + R DA+ D S L + PS++VIL ++S P+A Sbjct: 180 DHGDSFLLLESGRADAFIMDASILAGHIAKSKNPSDYVILDTVLSVEPIA 229 >gi|116050137|ref|YP_791046.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa UCBPP-PA14] gi|115585358|gb|ABJ11373.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa UCBPP-PA14] Length = 268 Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 64/253 (25%), Positives = 109/253 (43%), Gaps = 18/253 (7%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRAL 67 + + L S A L DI+K G L+ + GF + K+ +G DVD+ +AL Sbjct: 7 ITALALALISGLAQADRLEDIRKAGVLRVASFDSNPPFGFVDAKSK-QIEGLDVDYAKAL 65 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF-DG 126 + + ++Q LP N R L + ++D++ N +T+ RE + + F I YF G Sbjct: 66 ADKLG---VRLQVLPTNPANRIPLLTANKVDLVLAN--FTITRERAQQVDFS-IPYFSSG 119 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 Q FI+ KK ++S L+ + V GT E L + F + I ++ A Sbjct: 120 QQFIV-KKGTLTSPEVLNKWRVGVDKGTVNEGVLREKFPGAKV----IAYDDTPFAFTAL 174 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 R + A T D L L ++ + P IS + I +G+ ++ + Sbjct: 175 RNGQVQAITQDGPKLIGLLANVPDRDKYEVPPFTISNDLIGVGIPKGEK---SLTEFVDK 231 Query: 247 AMVTAEELGITQK 259 ++ E+ G QK Sbjct: 232 SLRELEQDGQAQK 244 >gi|307320837|ref|ZP_07600247.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti AK83] gi|306893547|gb|EFN24323.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti AK83] Length = 280 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 58/254 (22%), Positives = 101/254 (39%), Gaps = 11/254 (4%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 +S L ++ RG L G + + A +GFDVD R ++ A+F DP KI+++ Sbjct: 27 SSKLDEVLSRGHLILGTGSTNAPWHFKSAEDKLQGFDVDMGRIIAKALFGDPEKIEFVNQ 86 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 ++ R + + ++DI + T+ E + +AF Y +G ++ + L Sbjct: 87 SSDARIPNITTGKVDITCQFM--TVTGERAQQIAFTIPYYREGVALMLKADGKYADYDAL 144 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 A V + D A + +E V+ I A + R DA D S+L Sbjct: 145 KAAGSSVTISVLQNVYAEDMVHAALPEATVDQYESVDLIYQALESGRADAAATDQSSLAW 204 Query: 204 LKLTND---RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 N + + + P A + +GD +W N V+ + +T E K+ Sbjct: 205 YMTQNSGRYKDAGYGWNPQT-----YACGVRRGDQDWLNFVNTALHQAMTGVEFDFYAKS 259 Query: 261 INQ-VSKDTTNPDV 273 KD T P + Sbjct: 260 FKTWFGKDLTPPQI 273 >gi|257054837|ref|YP_003132669.1| periplasmic component of amino acid ABC-type transporter/signal transduction system [Saccharomonospora viridis DSM 43017] gi|256584709|gb|ACU95842.1| periplasmic component of amino acid ABC-type transporter/signal transduction system [Saccharomonospora viridis DSM 43017] Length = 278 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 50/197 (25%), Positives = 83/197 (42%), Gaps = 11/197 (5%) Query: 6 FVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 V+++ + L +T A SI+ G L GI G AE +G+ GFD D Sbjct: 9 LVNVVVVSALLAACSATEAAPDSIVTRASDTGSLTIGIGVDQPGLAERTMDGNVVGFDAD 68 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 R +++ + I + A ER AL S ++D++ T R+ + A Sbjct: 69 VARFVAAELGVPEGNITWKETLASEREKALASGEVDLVVAAYSVTERRQREVSFAG---P 125 Query: 123 YFD-GQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + GQ ++H+ ++ + L+G ++C G+T+ A K + + RV Sbjct: 126 YLEVGQDLLIHRNSTHLTDPAALAGHTVCSPTGSTSA---AHVRKRFGDAVRLVEYPRVS 182 Query: 181 EIDAAYRAHRCDAYTGD 197 E A A R DA D Sbjct: 183 ECVTALLAQRVDAVATD 199 >gi|116695573|ref|YP_841149.1| ABC transporter periplasmic protein [Ralstonia eutropha H16] gi|113530072|emb|CAJ96419.1| ABC-type transporter, periplasmic component: PAAT family [Ralstonia eutropha H16] Length = 312 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 57/244 (23%), Positives = 99/244 (40%), Gaps = 8/244 (3%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC-RALSSA---IFDDPS 76 ST + +L I++ G + G + F+ G G+ VD C RA +A + Sbjct: 39 STQSPVLDKIRESGTIVLGYRESALPFSFADDKGQPAGYAVDLCLRAAEAARQQLGLKDL 98 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 K++++PL + R A+ + +D+ +L R+ + AF Y ++ G Sbjct: 99 KVRWMPLTPQNRIPAVVNGLVDLDCAPNTNSLERQKQV--AFSVSHYVSTVRMLVRADSG 156 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 I S L G ++ AG+T + + KA YH + + E + R A+ Sbjct: 157 IRSFGDLRGKTVVTSAGSTGDRHV-RRMKAQ-YGYHDVYAKDHGESFLLLESGRAQAFVM 214 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 D L L+ PS++VI+ +S A + + D EW +V E+ Sbjct: 215 DDVLLAGLRARAKDPSQYVIVGPALSVEQNALMLSKADPEWKRLVDQALANTFAGPEVTA 274 Query: 257 TQKN 260 QK Sbjct: 275 LQKR 278 >gi|291444634|ref|ZP_06584024.1| sugar-binding protein [Streptomyces roseosporus NRRL 15998] gi|291347581|gb|EFE74485.1| sugar-binding protein [Streptomyces roseosporus NRRL 15998] Length = 332 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 36/131 (27%), Positives = 67/131 (51%), Gaps = 10/131 (7%) Query: 30 IKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 IK+RG L G+ N+ G+ + +GD +GFD+D RA++ + DP + + + + Sbjct: 72 IKERGKLIAGVDQNSFRWGYRNPE-SGDLEGFDIDLVRAIADDLLGDPDAVIFRAIPTNQ 130 Query: 88 RFLALQSKQIDILSRNT--DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV-SQLS 144 R AL++ ++D++ R + L ++S A+ + GQ + K+ I+ S L Sbjct: 131 RIAALENDRVDVVVRTMTINCKRLEQVSFSTAY----FQAGQQVLAPKESPITGYDSSLK 186 Query: 145 GASICVQAGTT 155 G +C G+T Sbjct: 187 GKRVCSAEGST 197 >gi|207092714|ref|ZP_03240501.1| glutamine ABC transporter, periplasmic glutamine-binding protein (glnH) [Helicobacter pylori HPKX_438_AG0C1] Length = 220 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 46/191 (24%), Positives = 86/191 (45%), Gaps = 12/191 (6%) Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 + G ++G+DV + ++ + D +KI+++P+ A R L++ ++DI+ N T RE Sbjct: 3 SKGKYQGYDVVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKERE 62 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 + A +P Y ++ K I ++ +L + V GTT + YF + Sbjct: 63 KVVDFA-KP--YMKVALGVISKDGVIKNIEELKDKELIVNKGTTADF----YFTKNYPNI 115 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + FE+ E + ++ A D + L A P + + + K +APAI Sbjct: 116 KLLKFEQNTETFLSLLNNKATALAHDNTLLLA--WAKQHPEFKLGITSLGDKDVIAPAIK 173 Query: 232 QGDT---EWYN 239 +G+ EW N Sbjct: 174 KGNPKLLEWLN 184 >gi|240850842|ref|YP_002972242.1| glutamate-aspartate ABC transporter periplasmic component GltI [Bartonella grahamii as4aup] gi|240267965|gb|ACS51553.1| glutamate-aspartate ABC transporter periplasmic component GltI [Bartonella grahamii as4aup] Length = 301 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 61/261 (23%), Positives = 108/261 (41%), Gaps = 14/261 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + I I F + L IK+ G + G+ G A N + GF Sbjct: 1 MKKSLLMFIAATAIGFTSVAHAEHDTLEKIKRTGEITLGVRES-SGLAYALGNNKYVGFH 59 Query: 61 VDFCRALSSAIFDD-------PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 + ++ I DD P KI YLP+ ++ R L++K D +T + R S Sbjct: 60 TE----MAERIIDDISKKIAKPIKIHYLPITSQNRIPLLKNKTYDFECGSTTNDIAR--S 113 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 AF TY + + K I S+ L+G ++ GTT+ + +A N+++ Sbjct: 114 KEAAFAYTTYIEEVRIAVKKNSNIKSLDDLNGKTVATTTGTTSVQLIRKNKRAKNIQFKV 173 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + + + + + DA+ D S L + PS++VIL ++S P+A + Sbjct: 174 LKGKDHGDSFLLLESGKADAFVMDASILAGHIAKSKNPSDYVILDTVLSVEPIACMLRLN 233 Query: 234 DTEWYNIVSWTHYAMVTAEEL 254 D ++ ++ + + E L Sbjct: 234 DKKFEQTINDSIVRQIKDESL 254 >gi|227329360|ref|ZP_03833384.1| putative amino acid ABC transporter, substrate binding protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 253 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 44/162 (27%), Positives = 73/162 (45%), Gaps = 10/162 (6%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 +L + S A L DI+KRG L+ + F V + +G+D+D R L+ + Sbjct: 5 MLLVQAGSAMADQLQDIEKRGVLRVAVPQDFPPFGSVGTDLQPQGYDIDIARYLAKEM-- 62 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE--ISLGLAFRPITYFDGQGFIM 131 K+Q +P+ + R LQ+ ++D++ + RE I A+ P +F G Sbjct: 63 -KLKLQLVPVTSANRVPYLQTNKVDLVISSLGKNAEREKVIDFSRAYAP--FF--LGVFG 117 Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYF-KAHNMKYH 172 K ++S L G SI V G ++ L D KA +K + Sbjct: 118 PKDSTLTSSDALEGKSIGVTRGAVEDMVLTDIAPKAAQIKRY 159 >gi|256618703|ref|ZP_05475549.1| extracellular solute-binding protein [Enterococcus faecalis ATCC 4200] gi|256598230|gb|EEU17406.1| extracellular solute-binding protein [Enterococcus faecalis ATCC 4200] Length = 275 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 44/185 (23%), Positives = 83/185 (44%), Gaps = 4/185 (2%) Query: 19 SFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDW-KGFDVDFCRALSSAIFDDPS 76 S S+N ++ + +KK G +K G+ + F + + + +G + D R + I Sbjct: 34 SASSNKTVTVEQLKKAGKIKVGVKEDIPNFGYMNPDTNKNEGMEPDIARLIVKEITGSEE 93 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 ++++ + AK R L + ++D++ +T+ E F Y D GF++ K+ Sbjct: 94 NVEFVGVTAKTRGPLLDNGELDMVIAT--FTITDERKKTYNFTTPYYTDEIGFLVRKEDN 151 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 SS+ L G +I V TT+ L + +K+ E+ A + R DA++ Sbjct: 152 FSSMKDLDGKTIGVAQSATTKENLEKKAQEEGIKFTYQELGSYPELKTALTSKRIDAFSV 211 Query: 197 DISAL 201 D S L Sbjct: 212 DKSIL 216 >gi|157363346|ref|YP_001470113.1| extracellular solute-binding protein [Thermotoga lettingae TMO] gi|157313950|gb|ABV33049.1| extracellular solute-binding protein family 3 [Thermotoga lettingae TMO] Length = 252 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 66/258 (25%), Positives = 112/258 (43%), Gaps = 24/258 (9%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + FFV IL + L FT AS++ DI+KRG L+ G + G + G+ G +V+ Sbjct: 2 RRFFV-ILIVTALLFTGL---ASLIDDIQKRGVLRVGQDEGYMPLYGTDEKGERVGLEVE 57 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 ++ + K++Y+ +N AL S + DI+ + T+ E +L + F Sbjct: 58 LINKIAEIL---GVKVEYVIVNWDGIIPALISGKFDIIF--SGMTITPERALKVNFSAPY 112 Query: 123 YFDGQGFIMHKK--KGISSVSQLSG--ASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 GQ + +K K + L+ I VQ GTT E T F K + F Sbjct: 113 LTVGQAILYNKSVFKTPPTYQDLADKPVKIAVQLGTTGEFTARRKFP----KAEILTFST 168 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE-- 236 ++E + R D D ++Y +K + + +++S+ L AI +GD E Sbjct: 169 MDEAAFQVVSKRADIMVND--SIY-VKFLTQKYETLGMTNELLSREDLGIAIRKGDMEAL 225 Query: 237 -WYN-IVSWTHYAMVTAE 252 W++ V W + + E Sbjct: 226 RWFDTFVQWAKTSGLIEE 243 >gi|126667081|ref|ZP_01738056.1| putative ABC transporter periplasmic amino acid-binding protein [Marinobacter sp. ELB17] gi|126628487|gb|EAZ99109.1| putative ABC transporter periplasmic amino acid-binding protein [Marinobacter sp. ELB17] Length = 273 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 45/148 (30%), Positives = 64/148 (43%), Gaps = 5/148 (3%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 L L + FTS + A L + +RG L CG+ N GFDV +C L++ Sbjct: 9 LVLSCIAFTSVNATADQLDTVIQRGTLNCGVVLDFPPMGYFDGNNQPAGFDVGYCNDLAA 68 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 A+ + L L +R +L S + D++ +T TL R S+G + P F Q Sbjct: 69 AL---GVESNILNLTWGDRIPSLISGKTDVVIGSTSDTLERAKSVGFTY-PYFVFKFQ-V 123 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTE 157 I K K I S L + GTT E Sbjct: 124 IAPKNKNIQSFDDLKNLKVGAALGTTYE 151 >gi|50086540|ref|YP_048050.1| amino acid ABC transporter periplasmic substrate-binding protein [Acinetobacter sp. ADP1] gi|49532514|emb|CAG70228.1| putative amino acid-binding protein (ABC superfamily, peri_bind) [Acinetobacter sp. ADP1] Length = 305 Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 54/229 (23%), Positives = 96/229 (41%), Gaps = 19/229 (8%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 L +F+ NA L DIKK G +K I F V + +G+D+D + ++ D Sbjct: 61 LMLPTFA-NADALADIKKAGVIKIAIPQDFPPFGTVGTDLKAQGYDIDVAKLIAQ---DL 116 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 K+Q +P+ + R L +K++D++ + RE + +++ G K Sbjct: 117 GVKLQLVPVTSANRIPYLTTKKVDLVISSLGKNPEREKVIDFVGPYAPFYN--GVFGQKN 174 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE----IDAAYRAHR 190 + S + L+G +I V G+ +L L+ + +R E+ + A Y Sbjct: 175 VSVKSAADLAGKTIAVTRGSIEDLELSKVAPSST------TIKRFEDNNSTVSAFYSGQV 228 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 TG++ A K + +P E II SP + +G+T N Sbjct: 229 NLIATGNVVAGTLSKHFSKKPLETKF---IIKNSPCYIGLNKGETALQN 274 >gi|270263422|ref|ZP_06191691.1| hypothetical protein SOD_e00460 [Serratia odorifera 4Rx13] gi|270042306|gb|EFA15401.1| hypothetical protein SOD_e00460 [Serratia odorifera 4Rx13] Length = 263 Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 36/161 (22%), Positives = 74/161 (45%), Gaps = 5/161 (3%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 +K V+ L ++L + S A L +I++RG L+ + F V + +G+D+ Sbjct: 3 FKKIGVATLGAVLLMAQAASAMADQLQEIQQRGVLRVAVPQDFPPFGSVGTDLQPQGYDI 62 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D L+ + K+Q +P+ + R LQ+ ++D++ + RE ++ + Sbjct: 63 DMAHYLADKM---KLKLQLVPVTSANRVPYLQTDKVDLVISSLGKNPEREKTIAFSRAYA 119 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162 +F G K+ + +QL G ++ V G ++ L+D Sbjct: 120 PFF--LGVFGPKEAVLGDAAQLDGKTVGVTRGAVEDMVLSD 158 >gi|300692064|ref|YP_003753059.1| glutamate/aspartate transport protein (ABC superfamily, peri_bind) high affinity periplasmic solute-binding protein [Ralstonia solanacearum PSI07] gi|299079124|emb|CBJ51791.1| glutamate/aspartate transport protein (ABC superfamily, peri_bind) high affinity periplasmic solute-binding protein [Ralstonia solanacearum PSI07] Length = 303 Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 56/256 (21%), Positives = 104/256 (40%), Gaps = 23/256 (8%) Query: 8 SILCLIILFF---TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 ++LC + F T+ ++ +L I+ G ++ F+ A+ G+ VD C Sbjct: 12 ALLCSSLSIFAPGTALASATPVLDRIRDTGTVRIAHRESAAPFSYYDADKKPIGYAVDLC 71 Query: 65 ----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 L + + K+QY+ + R + + D+ T T RE +AF Sbjct: 72 LRVVDKLRAELKRPDLKVQYVLVTPSTRIPTIMEGKADLECSTT--TNNRERREQVAFTI 129 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT--TEL-TLAD----YFKAHNMKYHP 173 Y G ++ GI L ++ + GTT TE+ L D + K +K H Sbjct: 130 PHYIAGIRMLVKTSSGIHKWDDLRNKTVVLTKGTTSVTEMRKLNDSRVLHMKIEEVKEHA 189 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 F VE + + DA+ D LY+ + P ++ ++ D+++ P A + + Sbjct: 190 EAFAMVE-------SGKADAFAMDDVQLYSFRANAKHPMDYTVVGDMMTVEPYAIMLSKS 242 Query: 234 DTEWYNIVSWTHYAMV 249 D E+ +V A++ Sbjct: 243 DPEFKRVVDRAMTAII 258 >gi|237740706|ref|ZP_04571187.1| solute-binding protein for glutamate/aspartate ABC transporter system [Fusobacterium sp. 2_1_31] gi|229422723|gb|EEO37770.1| solute-binding protein for glutamate/aspartate ABC transporter system [Fusobacterium sp. 2_1_31] Length = 293 Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 57/222 (25%), Positives = 99/222 (44%), Gaps = 23/222 (10%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 A + +IK G ++ G+ T F + NG +G+DV F L+ D K++Y+ L Sbjct: 45 ARTVQEIKDSGVIRIGVFTDKAPFGYIDENGKNQGYDVYFTDRLAK---DLGVKVEYISL 101 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 + R ++ + DI++ N T R ++ L + ++ G + I SV Sbjct: 102 DPASRVEYAETGKADIVAANFTVTPERAEKVDFSLPYMKVSL----GVVSPDGAVIKSVE 157 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIV-FERVEEIDAAYRA---HRCDAYTGD 197 +L ++ V GTT E YF K HP V ++ + AY A R DA++ D Sbjct: 158 ELKDKTLIVSKGTTAEY----YFS----KNHPEVKLQKYDSYADAYNALLDGRGDAFSTD 209 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + + A +N P V + + +A A+ +G+T+ N Sbjct: 210 NTEVLAWAKSN--PGFTVGIDSLGDVDTIAVAVQKGNTDLLN 249 >gi|311280748|ref|YP_003942979.1| extracellular solute-binding protein family 3 [Enterobacter cloacae SCF1] gi|308749943|gb|ADO49695.1| extracellular solute-binding protein family 3 [Enterobacter cloacae SCF1] Length = 276 Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 56/237 (23%), Positives = 95/237 (40%), Gaps = 11/237 (4%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCR 65 V++ L + + A L +IK G +K F V + G+D+DF Sbjct: 13 VALSVLATAGLAAQTARADQLANIKAAGVIKVATFDANPPFGSVDGKTHELVGYDIDFAN 72 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 AL+ ++ K++ + N R LQS + D++ D T+ E + + F + Sbjct: 73 ALAKSLG---VKLELVATNPANRIPLLQSGKADVIV--ADITITPERAQVIDFSTPYFVT 127 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 GQ F++ K G + A I GTT E L F + + ++ + A Sbjct: 128 GQQFLVAAKAG-DQLEDYQHARIGAVKGTTGEQALHQRFPQSRV----LAYDDIPLALTA 182 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 R A T D + L L + ILPD++SK + + +G+ N V+ Sbjct: 183 LRNGNVQAITQDSTILAGLLAGAPDKASFKILPDLLSKEEIGVGVKKGEPALLNAVN 239 >gi|302872379|ref|YP_003841015.1| extracellular solute-binding protein family 3 [Caldicellulosiruptor obsidiansis OB47] gi|302575238|gb|ADL43029.1| extracellular solute-binding protein family 3 [Caldicellulosiruptor obsidiansis OB47] Length = 266 Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 70/276 (25%), Positives = 108/276 (39%), Gaps = 32/276 (11%) Query: 1 MYKDFFVSILCLIILFF-------TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 MYK F V L L++ FF +S + N + L IKK G++ N Sbjct: 1 MYKKFVV--LVLLVAFFIPLLSGCSSNNQNMTTLEKIKKTKEFAVGMDNTFPPMEFADDN 58 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 + GFDVD ++ + +K++ + ++ AL+SK+ D + T R+ + Sbjct: 59 NNTVGFDVDLANEIAKKL---GAKLKIVTVDWSGIQSALKSKKFDAIISCFSITDERKKA 115 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 LA P Y + I S L G I VQA TT + + K N + Sbjct: 116 FNLA-GPYLYIRQVIAVKRGDSSIKSFEDLKGIKIGVQANTTGD-SAVQKMKFINYEKDV 173 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 +ER+ + R A D Y K N P + I P + K P+ A+ + Sbjct: 174 TRYERITDAFNDLDIGRIKAVVIDSVVAYYYKKQN--PEKFDIAPAELEKEPVGIALRKE 231 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 D E YN + QK ++Q+ KD T Sbjct: 232 DKELYNEI----------------QKILDQLKKDGT 251 >gi|271501781|ref|YP_003334807.1| family 3 extracellular solute-binding protein [Dickeya dadantii Ech586] gi|270345336|gb|ACZ78101.1| extracellular solute-binding protein family 3 [Dickeya dadantii Ech586] Length = 263 Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 39/159 (24%), Positives = 73/159 (45%), Gaps = 9/159 (5%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 ++++ +L + A L DI+KRG L+ + F V + +G+D+D R Sbjct: 7 VLAVVGAALLMVQAGQAMADQLQDIQKRGVLRVAVPQDFPPFGSVGTDLQPQGYDIDMAR 66 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE--ISLGLAFRPITY 123 L+S + K+Q +P+++ R LQ+ ++D++ + RE I A+ P + Sbjct: 67 YLASEM---KLKLQLVPVSSANRVPYLQTDKVDLVISSLGKNAEREKVIDFSSAYAP--F 121 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162 F G K ++S L G ++ V G ++ L D Sbjct: 122 F--LGVFGPKDTTVTSPDALQGKTVGVTRGAVEDMVLTD 158 >gi|254387161|ref|ZP_05002431.1| sugar-binding protein [Streptomyces sp. Mg1] gi|194345976|gb|EDX26942.1| sugar-binding protein [Streptomyces sp. Mg1] Length = 330 Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 64/135 (47%), Gaps = 9/135 (6%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 I+ G L G++ + +G GFD+ +A++ I D SK+ Y + +R Sbjct: 85 IRSAGKLVAGVDQNSFKWGYRNPDGHLDGFDIALVKAIAKDILGDESKVIYRAIPTSQRI 144 Query: 90 LALQSKQIDILSRNT--DWTLLREISLGLAFRPITYFD-GQGFIMHKKKGISSV-SQLSG 145 ALQ+ ++D++ R + L +++ A YF+ GQ ++ K I+ + L G Sbjct: 145 PALQAGRVDVVVRTMTINCKRLEDVAFSTA-----YFEAGQQVLVPKGSTITGYDASLKG 199 Query: 146 ASICVQAGTTTELTL 160 IC AG+T E L Sbjct: 200 RKICFAAGSTAEAAL 214 >gi|328948883|ref|YP_004366220.1| ABC transporter periplasmic protein family 3 [Treponema succinifaciens DSM 2489] gi|328449207|gb|AEB14923.1| ABC-type transporter, periplasmic subunit family 3 [Treponema succinifaciens DSM 2489] Length = 278 Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 56/237 (23%), Positives = 101/237 (42%), Gaps = 18/237 (7%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 +IL L T+A + IKK G +K + + F V G+++G+DV F + Sbjct: 15 AILALFSACVKENKTSARTVEQIKKSGEIKIAVFSDKKPFGYVDEYGEYQGYDVYFGNRI 74 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFD 125 + D K++Y+P+ A R L + ++DI+ N T R ++ L + + Sbjct: 75 AK---DLGVKVKYVPVEAASRVEFLVTGKVDIVLANFTVTPERAEKVDFALPYMKVAL-- 129 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 G + + ++ L G + + GTT E YF + + + F++ E +A Sbjct: 130 --GVVSPESALVTKPEDLIGKKLIISKGTTAET----YFTKNYPEVELLKFDQYAEAYSA 183 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT---EWYN 239 R + D + + A L N P V + + +A A+ +G+T EW N Sbjct: 184 LLDGRGAGMSTDNTEVLAWALEN--PGYKVGIESLGELDTIAAAVQKGNTSLLEWIN 238 >gi|16079797|ref|NP_390621.1| glutamine ABC transporter glutamine-binding lipoprotein [Bacillus subtilis subsp. subtilis str. 168] gi|221310680|ref|ZP_03592527.1| glutamine ABC transporter (glutamine-binding protein) [Bacillus subtilis subsp. subtilis str. 168] gi|221315003|ref|ZP_03596808.1| glutamine ABC transporter (glutamine-binding protein) [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319924|ref|ZP_03601218.1| glutamine ABC transporter (glutamine-binding protein) [Bacillus subtilis subsp. subtilis str. JH642] gi|221324205|ref|ZP_03605499.1| glutamine ABC transporter (glutamine-binding protein) [Bacillus subtilis subsp. subtilis str. SMY] gi|81555988|sp|O34563|GLNH_BACSU RecName: Full=ABC transporter glutamine-binding protein glnH; Flags: Precursor gi|2635189|emb|CAB14685.1| glutamine ABC transporter (glutamine-binding lipoprotein) [Bacillus subtilis subsp. subtilis str. 168] gi|28375453|emb|CAA93318.1| glutamine-binding subunit [Bacillus subtilis subsp. subtilis str. 168] Length = 273 Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 39/158 (24%), Positives = 72/158 (45%), Gaps = 7/158 (4%) Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 ++G+ +GFD+D + ++ I D K Q+ + +K R LQ+ ID + T+ E Sbjct: 65 SSGEIEGFDIDIAKQIAKDILGDEKKAQFKEVTSKTRIPMLQNGDIDAIVAT--MTITEE 122 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMK 170 + F + + GQ ++ K I SV L G+ + G+T+ + + ++ Sbjct: 123 RKKEVDFSDVYFEAGQSLLVKKGSKIKSVENLGKGSKVLAVKGSTSSQNIREKAPEASV- 181 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 + FE E A ++ + DA T D + LY + N Sbjct: 182 ---LEFENYAEAFTALKSGQGDALTTDNAILYGMADEN 216 >gi|293392696|ref|ZP_06637015.1| arginine ABC superfamily ATP binding cassette transporter, binding protein [Serratia odorifera DSM 4582] gi|291424813|gb|EFE98023.1| arginine ABC superfamily ATP binding cassette transporter, binding protein [Serratia odorifera DSM 4582] Length = 263 Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 36/160 (22%), Positives = 74/160 (46%), Gaps = 5/160 (3%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K +V+ L I+L + + A L DI++RG L+ + F V + +G+D+D Sbjct: 4 KRIWVTALGAIVLMAQAGAVQADQLQDIQQRGVLRVAVPQDFPPFGSVGTDLQPQGYDID 63 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + L+ + K+Q +P+ + R LQ+ ++D++ + RE ++ + Sbjct: 64 MAQYLADKM---KLKLQLVPVTSANRVPYLQTNKVDLVISSLGKNPQREKAIAFSRAYAP 120 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162 +F G + + + + L G +I V G ++ L+D Sbjct: 121 FF--LGVFGPQAEALKDPAALDGKTIGVTRGAVEDMVLSD 158 >gi|213691643|ref|YP_002322229.1| extracellular solute-binding protein, family 3 [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213523104|gb|ACJ51851.1| extracellular solute-binding protein, family 3 [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320457730|dbj|BAJ68351.1| amino acid ABC transporter substrate binding component [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 300 Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 59/232 (25%), Positives = 105/232 (45%), Gaps = 23/232 (9%) Query: 18 TSFSTNASI--LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 TS NA L +IKK G +K + + F V +G ++G+DV F L+ + P Sbjct: 45 TSSGANAKARSLDEIKKSGKIKIAVFSDKAPFGYVDKDGKYQGYDVYFAERLAKDLGVKP 104 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 +Y ++ R L S ++D++ N T R+ + A +P G + + Sbjct: 105 ---EYTSVDPAARVDVLTSNKVDLVLANFTVTEERKEKVDFA-KPYMKV-ALGVVSPQNA 159 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFK--AHNMKYHPIVFERVEEIDAAYRA---HR 190 I+ V QL G ++ + GTT E +F+ A N+K ++ ++ AY A R Sbjct: 160 PITDVGQLDGKTLIIAKGTTAET----WFEKNAPNVK-----LQKYDQYADAYNALLDGR 210 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 DA++ D + + A +N V + + +APA+ +G+ E + V+ Sbjct: 211 GDAFSTDNTEVLAWAKSN--KGFKVGITHLGDDDTIAPAVQKGNKELLDFVN 260 >gi|237731337|ref|ZP_04561818.1| cysteine transporter [Citrobacter sp. 30_2] gi|226906876|gb|EEH92794.1| cysteine transporter [Citrobacter sp. 30_2] Length = 276 Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 59/239 (24%), Positives = 99/239 (41%), Gaps = 14/239 (5%) Query: 8 SILCLIILFFTSFSTN---ASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDF 63 ++L L +L + + + A L DIK G +K F V A G+DVDF Sbjct: 11 TLLALGVLLASGLTVSQVQADQLADIKAAGVVKVATFDANPPFGSVDAKTHKIVGYDVDF 70 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 AL+ ++ K++ + N R LQS + D++ D T+ E + + F + Sbjct: 71 AEALAKSLG---VKLELVATNPANRIPLLQSGKADLIV--ADITITPERAQVIDFSVPYF 125 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 GQ F++ K + + S A I GTT E L F + + ++ + Sbjct: 126 VTGQQFLVPAKSP-DKLDEYSKARIGAVKGTTGEQALHQRFPQSRV----LAYDDIPLAL 180 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A R A T D + L L ++ ILPD++SK + + +G+ V+ Sbjct: 181 TALRNGNVQAITQDSTILAGLLGAAPDKADFKILPDLLSKEEIGVGVKKGEPALLKAVN 239 >gi|241762906|ref|ZP_04760969.1| extracellular solute-binding protein family 3 [Acidovorax delafieldii 2AN] gi|241368081|gb|EER62286.1| extracellular solute-binding protein family 3 [Acidovorax delafieldii 2AN] Length = 278 Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 62/226 (27%), Positives = 92/226 (40%), Gaps = 21/226 (9%) Query: 7 VSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFC 64 + +LC I T+ + +A + L IK+RG L G+ F + A G++V Sbjct: 14 LGLLCAI----TAPAAHADATLDKIKQRGKLVVGVILSGPPFGTIDPATQRHVGYNVLLA 69 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 ++ + +Q P N R LQ ++DIL N WT +E S L+F P + Sbjct: 70 EGVAKGLGVTVETVQVQPSN---RVQFLQQGKVDILVANMQWT--QERSEILSFVPTPFE 124 Query: 125 D-GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 + G I K GI + L G +CV G+ LAD AH F E Sbjct: 125 EVGGAAIAKKGTGIKAWDDLRGEPVCVSQGSNFTKPLADQHGAHIK-----AFRGQPESL 179 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 A R C A L L + N ++ +I+S S L P+ Sbjct: 180 LALRGGNCTAAVHVSPTLRELVVENPDWKDY----EIVSPSDLIPS 221 >gi|227877752|ref|ZP_03995786.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus crispatus JV-V01] gi|256850081|ref|ZP_05555511.1| glutamine ABC transporter substrate-binding protein [Lactobacillus crispatus MV-1A-US] gi|262047369|ref|ZP_06020326.1| glutamine ABC transporter substrate-binding protein [Lactobacillus crispatus MV-3A-US] gi|227862655|gb|EEJ70140.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus crispatus JV-V01] gi|256713053|gb|EEU28044.1| glutamine ABC transporter substrate-binding protein [Lactobacillus crispatus MV-1A-US] gi|260572343|gb|EEX28906.1| glutamine ABC transporter substrate-binding protein [Lactobacillus crispatus MV-3A-US] Length = 290 Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 50/177 (28%), Positives = 77/177 (43%), Gaps = 10/177 (5%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 + IK+RG+L+ + L + V + G G+DV R ++ + P IQ +NA Sbjct: 48 VSSIKRRGYLRIAVFGDLPPYGWVNSQGKRVGYDVRLARRVAKDLGVKPKFIQ---VNAN 104 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 R L S + DI+ N T R+ S+ +P G I K +++ QL G Sbjct: 105 NRIDTLNSNKADIVLANFTLTPERK-SVASWTKPYMKVS-VGVISPKSAPVTNAKQLKGK 162 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 S+ V GTT E +YF + + F+ + A + R A D S LYA Sbjct: 163 SVIVTKGTTAE----NYF-TKQKGVNLLKFDSKTQQFNAIKNGRGAALADDNSYLYA 214 >gi|253575034|ref|ZP_04852373.1| extracellular solute-binding protein, family 3 [Paenibacillus sp. oral taxon 786 str. D14] gi|251845490|gb|EES73499.1| extracellular solute-binding protein, family 3 [Paenibacillus sp. oral taxon 786 str. D14] Length = 284 Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 52/221 (23%), Positives = 103/221 (46%), Gaps = 13/221 (5%) Query: 27 LGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 L IK RG L G+ +T L G + + G+ +GFD+D + ++ I D + ++ + Sbjct: 50 LAKIKDRGKLVVGVKYDTKLFGLKD-PSTGNVEGFDIDISKTIAKHILGDENALELKEVT 108 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 +K R L + +ID++ T+ E + F + + GQ ++ K I+ + L+ Sbjct: 109 SKTRIPMLNNGEIDMIVAT--MTITEERKKEVDFSDVYFQAGQSLLVKKGSPITGIESLT 166 Query: 145 GASICVQA-GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 S + + G+T+ + + K +K + F+ ++ A +A + DA T D + LY Sbjct: 167 ADSTVLGSKGSTSVKNIRE--KVEGIKV--LEFDNYQDAFNALKAGQGDALTTDDAILYG 222 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + D E V P + P A+ +G+++ ++ T Sbjct: 223 M-AAQDPNYEVVGKP--FTDEPYGIAVQKGNSDIVQAINDT 260 >gi|237745206|ref|ZP_04575687.1| amino acid transporter [Fusobacterium sp. 7_1] gi|229432435|gb|EEO42647.1| amino acid transporter [Fusobacterium sp. 7_1] Length = 291 Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 48/193 (24%), Positives = 87/193 (45%), Gaps = 19/193 (9%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + A + +IK G ++ G+ T F V NG +G+DV F L+ D K++Y Sbjct: 40 TAKARTVQEIKDSGVIRIGVFTDKAPFGYVDENGKNQGYDVYFTNRLAK---DLGVKVEY 96 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKKGIS 138 + L+ R ++ + DI++ N T R ++ L + ++ G + K I Sbjct: 97 ISLDPASRVEYAETGKADIVAANFTVTPERAEKVDFSLPYMKVSL----GVVSPDKAVIK 152 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA---HRCDAYT 195 S+ +L ++ V GTT A+Y+ + N Y + ++ + AY A R DA++ Sbjct: 153 SIDELKDKTLIVSKGTT-----AEYYFSKN--YPEVKLQKYDSYADAYNALLDGRGDAFS 205 Query: 196 GDISALYALKLTN 208 D + + A N Sbjct: 206 TDNTEVLAWAKAN 218 >gi|256843605|ref|ZP_05549093.1| glutamine ABC transporter substrate-binding protein [Lactobacillus crispatus 125-2-CHN] gi|312984334|ref|ZP_07791676.1| CjaA protein [Lactobacillus crispatus CTV-05] gi|256615025|gb|EEU20226.1| glutamine ABC transporter substrate-binding protein [Lactobacillus crispatus 125-2-CHN] gi|310894259|gb|EFQ43339.1| CjaA protein [Lactobacillus crispatus CTV-05] Length = 288 Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 50/177 (28%), Positives = 77/177 (43%), Gaps = 10/177 (5%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 + IK+RG+L+ + L + V + G G+DV R ++ + P IQ +NA Sbjct: 46 VSSIKRRGYLRIAVFGDLPPYGWVNSQGKRVGYDVRLARRVAKDLGVKPKFIQ---VNAN 102 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 R L S + DI+ N T R+ S+ +P G I K +++ QL G Sbjct: 103 NRIDTLNSNKADIVLANFTLTPERK-SVASWTKPYMKVS-VGVISPKSAPVTNAKQLKGK 160 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 S+ V GTT E +YF + + F+ + A + R A D S LYA Sbjct: 161 SVIVTKGTTAE----NYF-TKQKGVNLLKFDSKTQQFNAIKNGRGAALADDNSYLYA 212 >gi|154148689|ref|YP_001406380.1| polar amino acid ABC uptake transporter substrate binding protein [Campylobacter hominis ATCC BAA-381] gi|153804698|gb|ABS51705.1| polar amino acid ABC uptake transporter substrate binding protein [Campylobacter hominis ATCC BAA-381] Length = 271 Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 40/156 (25%), Positives = 75/156 (48%), Gaps = 8/156 (5%) Query: 12 LIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70 +I +FS NA+ L +I+ L+ G+ F+++K++G+++GF++ F + ++ Sbjct: 4 FLIFLVLAFSLLNANSLNEIRSSKTLRVGVYDAQPPFSQLKSSGEFEGFEIGFAKEIAKG 63 Query: 71 IFDDP-SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 IF + +++ ++A +R LQ +D++ T+ E + + F + G Sbjct: 64 IFGESGGNVEFKAVSANDRIKFLQDNSVDLVI--ATLTITDERAKLVDFSNPYFAVNIGV 121 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165 + K I SQL I Q G T E DYFK Sbjct: 122 LTRKDDEIKEFSQLKNKIIITQKGGTAE----DYFK 153 >gi|94311476|ref|YP_584686.1| extracellular solute-binding protein [Cupriavidus metallidurans CH34] gi|93355328|gb|ABF09417.1| ABC-type transporter, periplasmic component, probable glutamate and aspartate transporter [Cupriavidus metallidurans CH34] Length = 310 Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 49/223 (21%), Positives = 96/223 (43%), Gaps = 7/223 (3%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KI 78 ++ ++ I++ G ++ V F+ + A+G G+ VD C + A+ P ++ Sbjct: 38 SSPVIQRIQQTGTIRIAHRESSVPFSFI-ADGKPVGYAVDLCLKAADAVRAQLKMPQLRV 96 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 +++P+ R A+ + D+ +T T RE +AF Y G ++ GI Sbjct: 97 EWVPVTPATRIPAIVDGKADLECGST--TNNRERREQVAFTIPHYIAGSRMLVKSDSGIR 154 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 S L G ++ GTT + ++ M + + + E A + R DA+ D Sbjct: 155 RWSDLRGKTVVSTTGTTPLAMIRKMDESGAMGWKVLEAKDHAEAFAMVESGRADAFVMDD 214 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 L+ L+ P+ + D+++ P A + + D E+ IV Sbjct: 215 VLLFGLRANAKNPASLAVTGDLLTIEPYAIMLSKQDAEFKKIV 257 >gi|38234609|ref|NP_940376.1| ABC transporter [Corynebacterium diphtheriae NCTC 13129] gi|38200873|emb|CAE50578.1| Putative ABC transpoter membrane protein [Corynebacterium diphtheriae] Length = 315 Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 37/133 (27%), Positives = 67/133 (50%), Gaps = 6/133 (4%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 S N + +++RG+L GI+ + +G+ KGF+VD R ++ IF +P KI Sbjct: 60 SLRPNGDDVPQVRQRGYLIVGIDQSQNLLSFRDTDGELKGFEVDLAREVARDIFGEP-KI 118 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-I 137 + +++ AL+ Q+D++ R+ T R+ + F YF G+ I+ +K I Sbjct: 119 DFRYVDSSSWVKALEDGQVDMVLRSISVTRERQDQV---FFSTPYFSGKTRILTQKDSDI 175 Query: 138 SSVSQLSGASICV 150 + L G ++CV Sbjct: 176 HGAADLKG-TVCV 187 >gi|86741500|ref|YP_481900.1| extracellular solute-binding protein [Frankia sp. CcI3] gi|86568362|gb|ABD12171.1| amino acid ABC transporter substrate-binding protein, PAAT family [Frankia sp. CcI3] Length = 319 Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 48/184 (26%), Positives = 81/184 (44%), Gaps = 21/184 (11%) Query: 31 KKRGFLKCGINT-----GLVGFAEVKANGDWKGFDVDFCRALSSAIF-----DDPSKIQY 80 + RG+L+ GI T GL+ + ++ +GFDV RA+++AIF DD +Q+ Sbjct: 59 RDRGYLRVGIATDAPPAGLMNWRTLR----LEGFDVGIARAVAAAIFGAERVDD--HVQF 112 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + ER L+S +D+L T R+ + F + Y ++ + G + Sbjct: 113 RAVTTSEREDLLRSGMVDMLVATMTITCERKRQV--RFSDVYYESTLRLLVRENAGFRGI 170 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + L G +C AG+T+ LA + P+ R+ + A + DA GD Sbjct: 171 ADLVGRPVCSSAGSTSSEKLA---RLPAPGPRPVTRARLADCLVALQHGDVDAIAGDDVL 227 Query: 201 LYAL 204 L L Sbjct: 228 LAGL 231 >gi|254382236|ref|ZP_04997597.1| glutamate binding periplasmic protein [Streptomyces sp. Mg1] gi|194341142|gb|EDX22108.1| glutamate binding periplasmic protein [Streptomyces sp. Mg1] Length = 301 Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 38/128 (29%), Positives = 62/128 (48%), Gaps = 6/128 (4%) Query: 31 KKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 K+RG L G+ E A+G + GFD++ + +S+++ DP I++ + + R Sbjct: 57 KRRGHLVVGVKEDQPYMGEKDPASGRYSGFDIEIAKMMSASLGFDPKTIEFKTIASANRE 116 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYF-DGQGFIMHK-KKGISSVSQLSGAS 147 ALQ+ QID R+ +G A YF GQ ++ K +K I L+G Sbjct: 117 TALQNGQIDYYVGTYTINDNRKKQVGFAG---PYFMAGQSLLVRKDEKDIKGPEDLAGKK 173 Query: 148 ICVQAGTT 155 +C AG+T Sbjct: 174 VCSAAGST 181 >gi|28870257|ref|NP_792876.1| glutamine/glutamate ABC transporter periplasmic glutamine/glutamate-binding protein [Pseudomonas syringae pv. tomato str. DC3000] gi|28853504|gb|AAO56571.1| glutamine/glutamate ABC transporter, periplasmic glutamine/glutamate-binding protein [Pseudomonas syringae pv. tomato str. DC3000] gi|331016472|gb|EGH96528.1| glutamine/glutamate ABC transporter, periplasmic glutamine/glutamate-binding protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 290 Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 56/226 (24%), Positives = 97/226 (42%), Gaps = 19/226 (8%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 S + S L IK R L G+ + F V G + GFD D + + + D K+++ Sbjct: 35 SPSTSYLETIKARDKLIVGVFSDKPPFGFVNEQGQYVGFDTDLGKRFAKDLLGDEKKVEF 94 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + + R LQS ++D++ N T+ E + + F ++ + + ++ Sbjct: 95 VVVEPASRIPFLQSDKVDLILANM--TVTPERAEAVDFTHPNLRVAVQALVPEASPVKTL 152 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHP----IVFERVEEIDAAYRAHRCDAYTG 196 L+ + V GTT ++ L K HP + FE+ E A R DAY Sbjct: 153 DDLASKTTIVTTGTTADIWLT--------KNHPDWKVLKFEKNSESLQALANGRGDAYAQ 204 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE---WYN 239 D L++ N P V+ + ++P+APA+ +G+ E W N Sbjct: 205 DNLVLFSWAKKN--PGYRVLEQKLGDEAPIAPAVKKGNIELRDWVN 248 >gi|17230921|ref|NP_487469.1| glutamine-binding protein of glutamine ABC transporter [Nostoc sp. PCC 7120] gi|17132562|dbj|BAB75128.1| glutamine-binding protein of glutamine ABC transporter [Nostoc sp. PCC 7120] Length = 271 Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 51/231 (22%), Positives = 106/231 (45%), Gaps = 18/231 (7%) Query: 9 ILCLIILFF----TSFSTNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVD 62 IL II+ F T +A+ + +I++RG++ + N L+GF + A+G +G ++D Sbjct: 17 ILSAIIICFMISATGLVASAAEMPEIQRRGYITVAVKDNLPLLGFKD--ADGKLQGLEID 74 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + L++ + ++ P++ ++R + + ++DI T R S ++F Sbjct: 75 LAKRLAADLLGKADAVKLQPVSNRDRLSVVFNHKVDIAIARVTATESR--SRLVSFSVPY 132 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y DG +++ K + ++ L+ I V ++T + Y K + +E Sbjct: 133 YMDGT-YLITKDATVQQINDLAKRKIAVLNNSSTIAEVRYYIP----KAELVGVNSYQEA 187 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 AA + A+ D S L + P ++ +LP +S +PL+ + +G Sbjct: 188 QAAIENNSVAAFAADGSLLSG--WVREHP-QYRLLPTKLSTAPLSVVMPKG 235 >gi|251790186|ref|YP_003004907.1| extracellular solute-binding protein family 3 [Dickeya zeae Ech1591] gi|247538807|gb|ACT07428.1| extracellular solute-binding protein family 3 [Dickeya zeae Ech1591] Length = 278 Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 37/147 (25%), Positives = 66/147 (44%), Gaps = 6/147 (4%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFD 73 + FTS A +L D+ +G LKC + + + F+ AN G DVD C AL+ + Sbjct: 14 VLFTSIGAQADLLADMTAQGELKCAVYSDVPPFSSPDANTRQLVGMDVDLCNALAKQM-- 71 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 K+ +P + + R + + + D+L N +T R + F Y + ++ K Sbjct: 72 -GLKLTLVPTSVEARIAVIVTGRADVLIANLAYTKTR--GNQIQFSDPYYVAKEMLLVKK 128 Query: 134 KKGISSVSQLSGASICVQAGTTTELTL 160 + ++ G I GTT+E ++ Sbjct: 129 ENADQTLEYFKGKRISATKGTTSEQSI 155 >gi|319791018|ref|YP_004152658.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] gi|315593481|gb|ADU34547.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] Length = 302 Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 49/229 (21%), Positives = 97/229 (42%), Gaps = 4/229 (1%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L IK G + G+ A + G+ + G+ V+ C + I + +K++Y+ + A Sbjct: 33 LDKIKASGKVVLGVREASPPMAYMLGAGEKYVGYHVELCERVLKDITPN-AKLEYMAVTA 91 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 + +Q+ +DI T R+ + A TY GI+++ QL+G Sbjct: 92 QNTIPLVQNGTLDIGCGPTTNNTARQQQVAFAL--TTYVSEVRMATRVDSGITTLDQLAG 149 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 ++ GTT L +A N+ Y+ ++ + E + R DA+ D + L + Sbjct: 150 RNVSASTGTTAVQLLRKRERAQNVSYNTMLGKDHLESFLLMESGRADAFVLDDNLLAGII 209 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 + P+ + I+ D + P+A + D + V + ++ + EL Sbjct: 210 ANSKNPAAYRIVGDALGSEPIALLFRKDDPAFKTAVDESLRKLMKSGEL 258 >gi|226938961|ref|YP_002794032.1| GltI [Laribacter hongkongensis HLHK9] gi|226713885|gb|ACO73023.1| GltI [Laribacter hongkongensis HLHK9] Length = 298 Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 49/250 (19%), Positives = 100/250 (40%), Gaps = 16/250 (6%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP----SKIQYLP 82 L ++++G G + F+ + AN G+ +D C +++ + + + + +P Sbjct: 30 LKKVQEKGEFVIGHRESSIPFSYLDANQKPVGYMMDICNRIAAEVKKEAGAKGAVTRLVP 89 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R + + +DI +T +L R+ + + P Y ++ GI S+S Sbjct: 90 VTSQTRIPLMTNGTVDIECGSTTNSLERQKQVAFSVTP--YITSIRMLVKADSGIKSLSD 147 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G + GTT++ + + K N+ + + + R A+ D L Sbjct: 148 LDGKPVVTTTGTTSDRYIKQHEKGQNLNVKNVYGKDHADSFLMVSTGRASAFVMDDVLLA 207 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG------- 255 L + P E I+ + +S P + + D + +V M+ + EL Sbjct: 208 GLIANSKNPKEFSIVGETLSVEPYGVMMRKDDPQLKAVVDRVIVGMMKSGELDKLYTKWF 267 Query: 256 ---ITQKNIN 262 I KNIN Sbjct: 268 MSPIPPKNIN 277 >gi|299529534|ref|ZP_07042971.1| amino-acid ABC transporter binding protein ybeJ precursor [Comamonas testosteroni S44] gi|298722397|gb|EFI63317.1| amino-acid ABC transporter binding protein ybeJ precursor [Comamonas testosteroni S44] Length = 303 Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 51/236 (21%), Positives = 99/236 (41%), Gaps = 4/236 (1%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 +T+ S L ++K G + G+ A + AN + G+ V+ C + + I +KI+ Sbjct: 28 TTSGSTLEKLQKTGKVVIGVRESSAPMAYAIGANHRFTGYHVELCEKVLAQIAPS-AKIE 86 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 Y+ + A+ +Q+ +D+ T L R+ + A TY + ++S Sbjct: 87 YMAITAQNTMPLVQNGTVDLGCGPTTNNLSRQKQVSFAV--TTYVSQVRMAVRADSPVTS 144 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 QL G ++ AGTT L Y +N+K + + E + R DA+ D + Sbjct: 145 FKQLDGKTVAASAGTTAVQLLRKYSHDNNVKLPTQLGKDHFESFLMLESGRADAFVLDDN 204 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L + + P + I+ + + P+A + + D + V M+ + E+ Sbjct: 205 LLAGVIANSKDPRGYKIVGEALGSEPIALLMRKDDPSFKKAVDDALVRMMKSGEVA 260 >gi|126658585|ref|ZP_01729732.1| glutamine-binding protein of glutamine ABC transporter [Cyanothece sp. CCY0110] gi|126620172|gb|EAZ90894.1| glutamine-binding protein of glutamine ABC transporter [Cyanothece sp. CCY0110] Length = 260 Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 50/198 (25%), Positives = 80/198 (40%), Gaps = 10/198 (5%) Query: 6 FVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 VS+L + +F S A+ L DIK+RG L + + +G ++D Sbjct: 9 LVSVLIITAIFNVGDSKLIAATLEDIKQRGKLIVAVKDNIRPLGFRNQENKLQGLEIDLA 68 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI-LSRNTDWTLLREISLGLAFRPITY 123 R L+ I DP + P++ +ER + ++D+ ++R T T I + F P Y Sbjct: 69 RQLAQDILGDPQAVVLQPVSNQERLQKVIDGEVDLAIARITINTSRGRI---VDFSPYYY 125 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 DG G I + K I S LS I V ++T + + I +E Sbjct: 126 LDGTGIITNNPK-IRSKYHLSQGKIAVLKRSST----IAVIRTEVPQAELIGVSSYQEAM 180 Query: 184 AAYRAHRCDAYTGDISAL 201 + DA+ D S L Sbjct: 181 TLLETQQVDAFAADNSIL 198 >gi|254302678|ref|ZP_04970036.1| ABC superfamily ATP binding cassette transporter binding protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148322870|gb|EDK88120.1| ABC superfamily ATP binding cassette transporter binding protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 292 Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 50/194 (25%), Positives = 86/194 (44%), Gaps = 21/194 (10%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + A + +IK G ++ G+ T F + NG +G+DV F L+ D K++Y Sbjct: 42 TAKARTVQEIKDSGVIRIGVFTDKAPFGYIDENGKNQGYDVYFTDRLAK---DLGVKVEY 98 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKKGIS 138 + L+ R ++ + DI++ N T R ++ L + ++ G + K I Sbjct: 99 ISLDPASRVEYAETAKADIVAANFTVTPERAEKVDFSLPYMKVSL----GVVSPDKAVIK 154 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP-IVFERVEEIDAAYRA---HRCDAY 194 S+ +L ++ V GTT E YF K HP I ++ + AY A R DA+ Sbjct: 155 SIDELKDKTLIVSKGTTAEY----YFS----KNHPEIKLQKYDSYADAYNALLDGRGDAF 206 Query: 195 TGDISALYALKLTN 208 + D + + A N Sbjct: 207 STDNTEVLAWAKAN 220 >gi|293380805|ref|ZP_06626846.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus crispatus 214-1] gi|290922629|gb|EFD99590.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus crispatus 214-1] Length = 283 Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 50/177 (28%), Positives = 77/177 (43%), Gaps = 10/177 (5%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 + IK+RG+L+ + L + V + G G+DV R ++ + P IQ +NA Sbjct: 46 VSSIKRRGYLRIAVFGDLPPYGWVNSQGKRVGYDVRLARRVAKDLGVKPKFIQ---VNAN 102 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 R L S + DI+ N T R+ S+ +P G I K +++ QL G Sbjct: 103 NRIDTLNSNKADIVLANFTLTPERK-SVASWTKPYMKVS-VGVISPKSAPVTNAKQLKGK 160 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 S+ V GTT E +YF + + F+ + A + R A D S LYA Sbjct: 161 SVIVTKGTTAE----NYF-TKQKGVNLLKFDSKTQQFNAIKNGRGAALADDNSYLYA 212 >gi|67923374|ref|ZP_00516855.1| extracellular solute-binding protein, family 3 [Crocosphaera watsonii WH 8501] gi|67854799|gb|EAM50077.1| extracellular solute-binding protein, family 3 [Crocosphaera watsonii WH 8501] Length = 261 Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 54/245 (22%), Positives = 100/245 (40%), Gaps = 25/245 (10%) Query: 9 ILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 +L L + F + N A+ L +IK+RG L + + + +G ++D Sbjct: 10 VLILTLGVFLNLGNNHLVIAATLEEIKERGKLLVAVKDNIRPLGFLDHKNQLQGLEIDLA 69 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI-LSRNT-DWTLLREISLGLAFRPIT 122 R L+ I DP + P++ +ER + ++D+ ++R T + + R ++ F P Sbjct: 70 RQLAQDILGDPQALILQPVSNQERLQKVIDGEVDLAIARVTINSSRGRLVN----FSPYY 125 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y DG G I + + I +V L + I V G++T +A + I + +E Sbjct: 126 YLDGTGIITNNGR-IRAVDHLRESKIAVLEGSST----IAVIRAELPQAKLIGVKSYQEA 180 Query: 183 DAAYRAHRCDAYTGDISAL----------YALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + +A+ D S L Y L + + V++P + + L I Q Sbjct: 181 MTLLETEKVEAFVADNSILTGWVQQYPQYYRLPVRLSGEALGVVMPKGLQYASLRSRINQ 240 Query: 233 GDTEW 237 W Sbjct: 241 AIGRW 245 >gi|241762905|ref|ZP_04760968.1| extracellular solute-binding protein family 3 [Acidovorax delafieldii 2AN] gi|241368080|gb|EER62285.1| extracellular solute-binding protein family 3 [Acidovorax delafieldii 2AN] Length = 299 Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 41/144 (28%), Positives = 66/144 (45%), Gaps = 7/144 (4%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + L I++RG L GI+ F ++ A G G+ + ++ + +++ +P+ Sbjct: 25 ATLDKIRQRGKLSVGIDGASPPFGKLDPATGKTGGYQTELAADIAKRLG---VQLETVPV 81 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY-FDGQGFIMHKKKGISSVSQ 142 A R LQS ++D+L N WT RE S L+F P Y G ++ K GI+ Sbjct: 82 TANTRVQFLQSGKVDLLIANIQWT--RERSEILSFAPTPYDLIGGAALVAKASGITRWED 139 Query: 143 LSGASICVQAGTTTELTLADYFKA 166 L G CV G+ LA+ A Sbjct: 140 LRGKVACVSQGSNYAKPLAEAHGA 163 >gi|160901197|ref|YP_001566779.1| extracellular solute-binding protein [Delftia acidovorans SPH-1] gi|160366781|gb|ABX38394.1| extracellular solute-binding protein family 3 [Delftia acidovorans SPH-1] Length = 308 Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 42/144 (29%), Positives = 65/144 (45%), Gaps = 7/144 (4%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + L IK+RG L GI+ F + A G G+ + ++ + ++ +P+ Sbjct: 29 ATLDKIKQRGKLSVGIDGASPPFGVLDPATGKTGGYQTELAADIARRLG---VPLETVPV 85 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY-FDGQGFIMHKKKGISSVSQ 142 A R LQS ++D+L N WT +E S L+F P Y G G ++ K GI Sbjct: 86 TASTRVQFLQSGKVDLLIANIQWT--QERSEILSFAPTPYDLIGGGALVAKASGIKRWED 143 Query: 143 LSGASICVQAGTTTELTLADYFKA 166 L G CV G+ LA+ + A Sbjct: 144 LRGKVACVSQGSNFAKPLAESYGA 167 >gi|307132300|ref|YP_003884316.1| putative amino acid ABC transporter periplasmic protein [Dickeya dadantii 3937] gi|306529829|gb|ADM99759.1| Putative amino acid ABC transporter, periplasmic protein [Dickeya dadantii 3937] Length = 263 Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 38/159 (23%), Positives = 72/159 (45%), Gaps = 9/159 (5%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 F++++ +L + A L DI+KRG L+ + F V + +G+D+D R Sbjct: 7 FLAVVGAALLMVQAGQVMADQLQDIQKRGVLRVAVPQDFPPFGSVGTDLQPQGYDIDMAR 66 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE--ISLGLAFRPITY 123 L+S + K+Q +P+ + R LQ+ ++D++ + RE I A+ P + Sbjct: 67 YLASEM---KLKLQLVPVTSANRVPYLQTDKVDLVISSLGKNAEREKVIDFSRAYAP--F 121 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162 F G K + + L G ++ V G ++ L + Sbjct: 122 F--LGVFGPKDTDVGAPEALQGKTVGVTRGAVEDMVLTE 158 >gi|69246349|ref|ZP_00603905.1| extracellular solute-binding protein, family 3 [Enterococcus faecium DO] gi|257878163|ref|ZP_05657816.1| extracellular solute-binding protein [Enterococcus faecium 1,230,933] gi|257881053|ref|ZP_05660706.1| extracellular solute-binding protein [Enterococcus faecium 1,231,502] gi|257884714|ref|ZP_05664367.1| extracellular solute-binding protein [Enterococcus faecium 1,231,501] gi|257889638|ref|ZP_05669291.1| extracellular solute-binding protein [Enterococcus faecium 1,231,410] gi|258616331|ref|ZP_05714101.1| glutamine ABC transporter, substrate binding protein [Enterococcus faecium DO] gi|260559210|ref|ZP_05831396.1| extracellular solute-binding protein family 3 [Enterococcus faecium C68] gi|261207743|ref|ZP_05922428.1| extracellular solute-binding protein family 3 [Enterococcus faecium TC 6] gi|289565818|ref|ZP_06446260.1| ABC transporter glutamine-binding protein glnH [Enterococcus faecium D344SRF] gi|293554036|ref|ZP_06674636.1| glutamine-binding protein [Enterococcus faecium E1039] gi|293563130|ref|ZP_06677595.1| glutamine-binding protein [Enterococcus faecium E1162] gi|293569785|ref|ZP_06680872.1| glutamine-binding protein (GlnBP) [Enterococcus faecium E1071] gi|294619641|ref|ZP_06699063.1| glutamine-binding protein [Enterococcus faecium E1679] gi|294623308|ref|ZP_06702170.1| glutamine-binding protein [Enterococcus faecium U0317] gi|314939889|ref|ZP_07847095.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecium TX0133a04] gi|314943736|ref|ZP_07850475.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecium TX0133C] gi|314949692|ref|ZP_07853010.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecium TX0082] gi|314953238|ref|ZP_07856177.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecium TX0133A] gi|314993682|ref|ZP_07859030.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecium TX0133B] gi|314997401|ref|ZP_07862352.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecium TX0133a01] gi|68195302|gb|EAN09753.1| extracellular solute-binding protein, family 3 [Enterococcus faecium DO] gi|257812391|gb|EEV41149.1| extracellular solute-binding protein [Enterococcus faecium 1,230,933] gi|257816711|gb|EEV44039.1| extracellular solute-binding protein [Enterococcus faecium 1,231,502] gi|257820552|gb|EEV47700.1| extracellular solute-binding protein [Enterococcus faecium 1,231,501] gi|257825998|gb|EEV52624.1| extracellular solute-binding protein [Enterococcus faecium 1,231,410] gi|260074967|gb|EEW63283.1| extracellular solute-binding protein family 3 [Enterococcus faecium C68] gi|260078126|gb|EEW65832.1| extracellular solute-binding protein family 3 [Enterococcus faecium TC 6] gi|289162361|gb|EFD10219.1| ABC transporter glutamine-binding protein glnH [Enterococcus faecium D344SRF] gi|291587533|gb|EFF19410.1| glutamine-binding protein (GlnBP) [Enterococcus faecium E1071] gi|291594115|gb|EFF25567.1| glutamine-binding protein [Enterococcus faecium E1679] gi|291597276|gb|EFF28465.1| glutamine-binding protein [Enterococcus faecium U0317] gi|291601818|gb|EFF32070.1| glutamine-binding protein [Enterococcus faecium E1039] gi|291604908|gb|EFF34377.1| glutamine-binding protein [Enterococcus faecium E1162] gi|313588536|gb|EFR67381.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecium TX0133a01] gi|313591856|gb|EFR70701.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecium TX0133B] gi|313594704|gb|EFR73549.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecium TX0133A] gi|313597599|gb|EFR76444.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecium TX0133C] gi|313640852|gb|EFS05432.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecium TX0133a04] gi|313643950|gb|EFS08530.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecium TX0082] Length = 271 Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 53/214 (24%), Positives = 95/214 (44%), Gaps = 21/214 (9%) Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 +T L G ++++ +GFDVD +A++ I D K +++ + +K R L++ ID + Sbjct: 50 DTRLFGMMDIESR-TVQGFDVDIAKAITKKILGDNGKTEFVEVTSKTRIPLLKNGNIDAI 108 Query: 101 SRNTDWTLLREISLGLAFRPITYFD-GQGFIMHKKKGISSVSQLSGASICVQAGTTTELT 159 T+ E + F + YFD GQ ++ K I SV L+ +TT L Sbjct: 109 IAT--MTITDERKKQVDFSDV-YFDAGQALLVKKGSQIKSVDDLN--------ASTTVLA 157 Query: 160 LADYFKAHNMKYHP-----IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 + A N++ H + E E A ++ + DA T D + L L + ++ P E+ Sbjct: 158 VKGSTSAANIRQHAPDAKILELENYAEAFTALQSGQGDAMTTDNAIL--LGIADENP-EY 214 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 ++ + P AI +G + V+ M Sbjct: 215 ELVGGTFTNEPYGIAINKGQENFLKAVNQALEEM 248 >gi|220920915|ref|YP_002496216.1| family 3 extracellular solute-binding protein [Methylobacterium nodulans ORS 2060] gi|219945521|gb|ACL55913.1| extracellular solute-binding protein family 3 [Methylobacterium nodulans ORS 2060] Length = 267 Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 10/160 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFD 60 K +S++ L+ L + S A L DIKKRG L C T F ++ G+D Sbjct: 2 KTLTLSLVALLSL--GAVSARADQLDDIKKRGTLVCATLGTTEPFSFQDLTTR-QTAGYD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDFC+A++ A+ K++ + + R L ++D+++ N +T R + + Sbjct: 59 VDFCKAIADAL---GVKLELKLVAVEARIPELSQGRVDVVAANLGYTPERAEQID--YSD 113 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 Y Q + +G + S L G + G+T+EL + Sbjct: 114 FYYVSQQKLLARDAEGFKAASDLGGKRVSAIKGSTSELAV 153 >gi|37524239|ref|NP_927583.1| hypothetical protein plu0219 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36783662|emb|CAE12514.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 278 Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 69/248 (27%), Positives = 109/248 (43%), Gaps = 26/248 (10%) Query: 7 VSILCLII-LFFTSFSTNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDF 63 V I L+ L + + A L DIKK G ++ + + GF + + G+DVD Sbjct: 5 VVITALLAGLTLVTGAAKADKLDDIKKTGAVRIAVFDSNPPFGFIDPQTK-KLAGYDVDI 63 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 A+++ D K++ P N R L SK++D+++ N +T+ E + + F I Y Sbjct: 64 ANAIAN---DLGVKLELRPTNPANRLPLLASKKVDLIAAN--FTVTHERAKQVDFS-IPY 117 Query: 124 F-DGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFK-AHNMKYH--PIVFER 178 F GQ FI +KGI S + I GT E+TL +++ A + Y P+ F Sbjct: 118 FATGQKFIA--RKGILKSPEDIKNLRIGADKGTVQEITLREHYPTAKVISYDDTPLAF-- 173 Query: 179 VEEIDAAYRAHRCDAYTGDISALYAL--KLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 AA R A T D + L L + + +E I P I++ A A +G Sbjct: 174 -----AALRNGNVQAITQDDAKLVGLLANVPEAQKAEFEISPFSITREYQAVAAAKGQER 228 Query: 237 WYNIVSWT 244 V+ T Sbjct: 229 LVEAVNQT 236 >gi|222099043|ref|YP_002533611.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Thermotoga neapolitana DSM 4359] gi|221571433|gb|ACM22245.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Thermotoga neapolitana DSM 4359] Length = 246 Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 53/236 (22%), Positives = 105/236 (44%), Gaps = 17/236 (7%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 L +++ S + + +IK RG+L G++ F V NG+ GFDVD + ++ Sbjct: 4 LIAVLVLAISMVAFSGAIEEIKSRGYLLVGLSADFPPFEFVDENGNIVGFDVDLAKEIAR 63 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD-GQG 128 + +++ + + +L +K+ID++ + T+ E +AF YFD GQ Sbjct: 64 RL---GVELKIVDMTFDGLIPSLLTKKIDVII--SGMTITEERKKVVAFSD-PYFDAGQV 117 Query: 129 FIMHKKKGI--SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 ++ K + L G ++ VQ GTT ++ ++ Y + ++ F++ + Sbjct: 118 IVVRKDSDFRPKTYEDLVGKTVAVQIGTTGDIEVSKYEGINVVR-----FDKFTDAFLEL 172 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + R DA D + A N + VI D++S A+ + DT+ ++ Sbjct: 173 KRKRADAVVLDSATARAFVSKN---PDIVISSDVLSSEQYGIAVRKEDTDLLEFIN 225 >gi|221069161|ref|ZP_03545266.1| extracellular solute-binding protein family 3 [Comamonas testosteroni KF-1] gi|220714184|gb|EED69552.1| extracellular solute-binding protein family 3 [Comamonas testosteroni KF-1] Length = 303 Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 50/221 (22%), Positives = 92/221 (41%), Gaps = 9/221 (4%) Query: 13 IILFFTSFSTNA-----SILGDIKKRGFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRA 66 ++ T+F A S L ++K G + G+ A + AN + G+ V+ C Sbjct: 15 LVAAMTTFGAQAQTAPGSTLEKLQKTGKVVIGVRESSAPMAYAIGANHRFTGYHVELCEK 74 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 + + I +KI+Y+ + A+ +Q+ +D+ T L R+ + AF TY Sbjct: 75 VLAQIVPS-AKIEYMAITAQNTMPLVQNGTVDLGCGPTTNNLSRQKQV--AFAVTTYVSQ 131 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 + ++S QL G ++ AGTT L Y +N+K + + E Sbjct: 132 VRMAVRADSPVTSFKQLDGKTVAASAGTTAVQLLRKYSHENNVKLPTQLGKDHFESFLML 191 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 + R DA+ D + L + P + I+ + + P+A Sbjct: 192 ESGRADAFVLDDNLLAGVIANAKDPKGYKIVGEALGSEPIA 232 >gi|307728863|ref|YP_003906087.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1003] gi|307583398|gb|ADN56796.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1003] Length = 267 Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 40/161 (24%), Positives = 74/161 (45%), Gaps = 9/161 (5%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + S+L IL T+ + +A L +I K G LK + F V + +G+D+D Sbjct: 11 RTLLASLLVSSILAITAHAAHADTLDNIVKAGVLKVAVPEDYPPFGSVGPDMKPQGYDID 70 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE--ISLGLAFRP 120 L+ ++ K++ +P+N+ R LQ+ ++D++ + T RE I A+ P Sbjct: 71 TAALLAKSMN---VKLELVPVNSANRIPYLQTNKVDLVISSLGKTPDREKVIDFSTAYAP 127 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 Y+ QG +S + L+G ++ G E+ L+ Sbjct: 128 --YY--QGVFGPADIKVSGPADLTGKTVGATRGALEEIGLS 164 >gi|227544431|ref|ZP_03974480.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri CF48-3A] gi|300908278|ref|ZP_07125743.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri SD2112] gi|68160716|gb|AAY86804.1| lr0525 [Lactobacillus reuteri] gi|227185594|gb|EEI65665.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri CF48-3A] gi|300894525|gb|EFK87882.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri SD2112] Length = 276 Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 49/206 (23%), Positives = 90/206 (43%), Gaps = 14/206 (6%) Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 +T L G ++ G +GF++D A++ I K ++P+ + R L++ ID + Sbjct: 50 DTRLFGLENIRT-GKLEGFEIDLATAITKKILGPQGKPIFVPVTSGTRVPLLKNGNIDAI 108 Query: 101 SRNTDWTLLREISLGLAFRPITYFD-GQGFIMHKKKGISSVSQLS--GASICVQAGTTTE 157 T RE + +YFD GQ ++ K I ++S L+ GA I +G+ + Sbjct: 109 MATMTITPEREKQVDFTH---SYFDAGQSLLVKKGSPIKNISDLNRRGAIILGVSGSNSV 165 Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 +A + K + + A ++ + DA T D LY + N P V+ Sbjct: 166 KNVAKFAP----KARALQLSDYAQAMTALKSKQGDALTTDNGILYGMAAEN--PGYEVVG 219 Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSW 243 + +K P A+ + T + N ++W Sbjct: 220 GN-FTKEPYGIAVNKNQTRFRNKLNW 244 >gi|167824254|ref|ZP_02455725.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 9] gi|226196401|ref|ZP_03791983.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei Pakistan 9] gi|225931618|gb|EEH27623.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei Pakistan 9] Length = 271 Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 55/183 (30%), Positives = 82/183 (44%), Gaps = 19/183 (10%) Query: 27 LGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 L DI+K G L+ + GF + + N G DVD+ +AL+ + K++ P N Sbjct: 27 LDDIRKAGVLRVATFDSNPPFGFVDPRTN-RIVGLDVDYAQALADRLG---VKLKLQPTN 82 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 R L S ++D++ N +T+ E + + F + GQ F + KK + S QL+ Sbjct: 83 PANRIPFLTSGKVDLVLAN--FTITDERAKQVDFSVPYFASGQQF-LAKKGALKSADQLN 139 Query: 145 GASICVQAGTTTELTLAD-YFKAHNMKYH--PIVFERVEEIDAAYRAHRCDAYTGDISAL 201 I GTT E+TL + Y +A + Y P F AA RA A T D L Sbjct: 140 RLRIGADKGTTNEVTLREKYPQATIVAYDDTPFAF-------AALRAGNVQAITQDGPKL 192 Query: 202 YAL 204 L Sbjct: 193 IGL 195 >gi|242238356|ref|YP_002986537.1| extracellular solute-binding protein family 3 [Dickeya dadantii Ech703] gi|242130413|gb|ACS84715.1| extracellular solute-binding protein family 3 [Dickeya dadantii Ech703] Length = 254 Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 39/151 (25%), Positives = 69/151 (45%), Gaps = 9/151 (5%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 +L + S A L DI++RG L+ + F V + +G+D+D R L+ + Sbjct: 6 LLIMQAGSAMADQLQDIQQRGVLRVAVPQDFPPFGSVGTDLQPQGYDIDVARYLAGEM-- 63 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE--ISLGLAFRPITYFDGQGFIM 131 K+Q +P+ + R LQ+ ++D++ + RE I A+ P +F G Sbjct: 64 -KLKLQLVPVTSANRVPYLQTDKVDLVISSLGKNAEREKVIDFSRAYAP--FF--LGVFG 118 Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLAD 162 K+ +SS L G ++ V G ++ L D Sbjct: 119 PKEGDVSSPDALQGKTVGVTRGAVEDMVLTD 149 >gi|239816902|ref|YP_002945812.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] gi|239803479|gb|ACS20546.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] Length = 297 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 50/228 (21%), Positives = 95/228 (41%), Gaps = 7/228 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFD----DPSKIQYL 81 L IK+ G ++ G + F+ + A GF + C + AI +++Y Sbjct: 28 LRKIKETGTVQIGSRDTQIPFSYKTGAESAPIGFTNEICLKVVDAIKAKLGLSKIEVRYT 87 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 LN+ R +Q+ +D+ T T+ R+ + F P + + K GI+S++ Sbjct: 88 LLNSTNRIPLVQNGTVDLDCATTTNTVQRQQQVD--FAPSHFVTNITAAVKKNSGINSIA 145 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L G ++ AG+T+ L + K N++ I + + + R AY D L Sbjct: 146 DLQGKTVATVAGSTSMQLLRGFRKTENIEVQEIAGKDTADAFLLLASDRAAAYVLDDVQL 205 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 L +++ +L D++ + P + + D E+ IV M+ Sbjct: 206 AGLIANQPNAADYKLLKDVLRQEPYGIMMRKDDPEFKAIVDQAVTEMM 253 >gi|218245993|ref|YP_002371364.1| family 3 extracellular solute-binding protein [Cyanothece sp. PCC 8801] gi|257059044|ref|YP_003136932.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 8802] gi|218166471|gb|ACK65208.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 8801] gi|256589210|gb|ACV00097.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 8802] Length = 255 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 44/178 (24%), Positives = 81/178 (45%), Gaps = 13/178 (7%) Query: 27 LGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 L +I KRG L + N +GF++ NG+ +G ++D R L+ + DP + + P++ Sbjct: 26 LEEILKRGQLIVAVKDNVRPLGFSD--QNGELQGLEIDLARRLAEELLGDPQAVIFQPVS 83 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 ++R + +++D+ T R + F P Y DG G + K+ + V+ L+ Sbjct: 84 NQKRLQMVIDQEVDLAIARVSVTPSRNRLVD--FSPYYYLDGTGLV-TKQSYLGGVAGLA 140 Query: 145 GASICV-QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 I V + +T + A++ +A + + EE DA+ GD S L Sbjct: 141 KGKIAVLRVSSTIAVIRAEFPQAELVGVNS-----YEEALRLLENETVDAFAGDNSIL 193 >gi|154246379|ref|YP_001417337.1| extracellular solute-binding protein [Xanthobacter autotrophicus Py2] gi|154160464|gb|ABS67680.1| extracellular solute-binding protein family 3 [Xanthobacter autotrophicus Py2] Length = 271 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 5/140 (3%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 S +A+ L DI+KRG ++ G+ TG V +G G+DVD L +F+ P ++ Sbjct: 29 SADATSLSDIQKRGKVRIGVLTGAPPMGMVDEHGKPAGYDVDVAN-LVGTMFNLP--VEL 85 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +P+ R ALQ+ Q+D L T R ++ + P + F+ + K + V Sbjct: 86 VPVTPPARIPALQTGQVDFLVATLAPTGERAKTV-MFTTPYSAFN-MVVVSGPGKVYNVV 143 Query: 141 SQLSGASICVQAGTTTELTL 160 L G I V G++ E L Sbjct: 144 GDLKGKRIAVNRGSSQETAL 163 >gi|331007213|ref|ZP_08330422.1| Hypothetical Protein IMCC1989_1214 [gamma proteobacterium IMCC1989] gi|330418980|gb|EGG93437.1| Hypothetical Protein IMCC1989_1214 [gamma proteobacterium IMCC1989] Length = 532 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 15/198 (7%) Query: 13 IILFFTSFSTNASILGD------IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 +++ F+ F TNA D IK RG + G+ +A A+G+ G +VD + Sbjct: 8 LLILFSFFFTNALAASDSPRLDLIKSRGAVIVGVKNDYPPWAYYDASGNLVGLEVDLAQD 67 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 ++ + ++ + + R L+ IDI+ T R G+ P Y G Sbjct: 68 IADRL---GVSLKLQAVTSSNRISQLEQGSIDIIIATMGDTAKRRQQTGI-IEPSYYSSG 123 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 ++HKK + S ++L G S+C+ T L + F KY E + AA Sbjct: 124 ATILIHKKSPLKSWAELYGKSVCLTKNTYLNRDLIERFLLKPQKY-----EGTLDNMAAL 178 Query: 187 RAHRCDAYTGDISALYAL 204 + +C + D +AL L Sbjct: 179 QFGKCSGWIYDDTALTRL 196 >gi|253987650|ref|YP_003039006.1| periplasmic binding transport protein [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253779100|emb|CAQ82260.1| putative periplasmic binding transport protein [Photorhabdus asymbiotica] Length = 287 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 68/248 (27%), Positives = 111/248 (44%), Gaps = 26/248 (10%) Query: 24 ASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 A L DIKK G ++ + + GF + + G+DVD A+++ D K++ Sbjct: 32 ADKLDDIKKAGTVRIAVFDSNPPFGFIDPQTK-KLAGYDVDIANAIAN---DLGVKLELR 87 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF-DGQGFIMHKKKGISSV 140 P N R L SK+ID+++ N +T+ E + + F I YF GQ FI +K + S Sbjct: 88 PTNPANRLPLLASKKIDLIAAN--FTVTDERAKQVDFS-IPYFATGQKFIA-RKGVLKSP 143 Query: 141 SQLSGASICVQAGTTTELTLADYFK-AHNMKYH--PIVFERVEEIDAAYRAHRCDAYTGD 197 + I GT E+TL +++ A + Y P+ F AA R A T D Sbjct: 144 EDIKNLRIGADKGTVQEITLREHYPTAKVISYDDTPLAF-------AALRNGNVQAITQD 196 Query: 198 ISALYAL--KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + L L + + +E I P I++ A A +G+ +V+ T ++ E+ G Sbjct: 197 DAKLVGLLANVPAAQKAEFEISPFSITREYQAVAAAKGEGRLVEVVNQT---LLKLEKEG 253 Query: 256 ITQKNINQ 263 +K N Sbjct: 254 EAEKIYNH 261 >gi|242279193|ref|YP_002991322.1| extracellular solute-binding protein family 3 [Desulfovibrio salexigens DSM 2638] gi|242122087|gb|ACS79783.1| extracellular solute-binding protein family 3 [Desulfovibrio salexigens DSM 2638] Length = 271 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 57/225 (25%), Positives = 99/225 (44%), Gaps = 22/225 (9%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L I K G L+CGI +G + F G GF++D R ++ A+ ++++P+N Sbjct: 31 STLNSILKSGELRCGIASGYIPFQMTDKKGRIVGFEIDLAREMAKAM-----GVKFVPVN 85 Query: 85 AKERFL--ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSV 140 + + AL + +IDI++ T+ +E +L + F GQ +++KK I S Sbjct: 86 MEFDGIIPALLTNKIDIIT--AGMTVNQERNLQINFAEPFMVVGQTVLLNKKLEGKIKSY 143 Query: 141 SQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA--HRCDAYTG 196 L+ +I + GTT E + K + E DAA + DA Sbjct: 144 KDLNKPEYTIVSKLGTTGEQAAKRFIPKAKYKSFDL------ETDAALEVLNGKADAMIY 197 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 D+ A+ + + V L + + PL I +GD ++ N + Sbjct: 198 DLP-FNAIFMAEQGEGKLVFLDEPFTYEPLGWGISKGDPDFLNFL 241 >gi|319791997|ref|YP_004153637.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] gi|315594460|gb|ADU35526.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] Length = 300 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 57/252 (22%), Positives = 109/252 (43%), Gaps = 13/252 (5%) Query: 4 DFF--VSILCL-IILFFTSFSTNAS---ILGDIKKRGFLKCGINTGLVGFA-EVKANGDW 56 DFF S L L + L FT + +A L IK+ G ++ G + F+ ++ A+ Sbjct: 2 DFFKLPSALALGLTLAFTCGAASAQDGGTLQKIKESGTIQIGARDSQIPFSYKLSADSAP 61 Query: 57 KGFDVDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G+ D C + A+ +++Y LN+ R LQ+ +D+ T T R+ Sbjct: 62 IGYTNDICLKIVDAVKAKLGLSKIEVRYTMLNSTNRIPLLQNGTVDLDCATTTNTTQRQA 121 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + F P + + K GI+++S L+G ++ +G+T+ L K+ ++ + Sbjct: 122 QVD--FAPSHFVTNITAAVRKNSGINALSDLNGKNVATVSGSTSIQLLRGARKSGTIEVN 179 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 I + + R DAY D L + + P E+ +L + + + P + + Sbjct: 180 EIAGKDTSDGFLLLSTGRADAYVLDDVQLAGMIASATNPGEYKLLKESLRQEPYGIMLRK 239 Query: 233 GDTEWYNIVSWT 244 D ++ +V T Sbjct: 240 DDPQFKALVDET 251 >gi|148544724|ref|YP_001272094.1| extracellular solute-binding protein [Lactobacillus reuteri DSM 20016] gi|184154076|ref|YP_001842417.1| glutamine ABC transporter substrate binding component [Lactobacillus reuteri JCM 1112] gi|227363849|ref|ZP_03847954.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri MM2-3] gi|325683059|ref|ZP_08162575.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri MM4-1A] gi|148531758|gb|ABQ83757.1| amino acid ABC transporter substrate-binding protein, PAAT family [Lactobacillus reuteri DSM 20016] gi|183225420|dbj|BAG25937.1| glutamine ABC transporter substrate binding component [Lactobacillus reuteri JCM 1112] gi|227071076|gb|EEI09394.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri MM2-3] gi|324977409|gb|EGC14360.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri MM4-1A] Length = 276 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 49/206 (23%), Positives = 90/206 (43%), Gaps = 14/206 (6%) Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 +T L G ++ G +GF++D A++ I K ++P+ + R L++ ID + Sbjct: 50 DTRLFGLENIRT-GKLEGFEIDLATAITKKILGPQGKPIFVPVTSGTRVPLLKNGNIDAI 108 Query: 101 SRNTDWTLLREISLGLAFRPITYFD-GQGFIMHKKKGISSVSQLS--GASICVQAGTTTE 157 T RE + +YFD GQ ++ K I ++S L+ GA I +G+ + Sbjct: 109 MATMTITPEREKQVDFTH---SYFDAGQSLLVKKGSPIKNISDLNRRGAVILGVSGSNSV 165 Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 +A + K + + A ++ + DA T D LY + N P V+ Sbjct: 166 KNVAKFAP----KARVLQLSDYAQAMTALKSKQGDALTTDNGILYGMAAEN--PGYEVVG 219 Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSW 243 + +K P A+ + T + N ++W Sbjct: 220 GN-FTKEPYGIAVNKNQTRFRNKLNW 244 >gi|302388265|ref|YP_003824087.1| extracellular solute-binding protein family 3 [Clostridium saccharolyticum WM1] gi|302198893|gb|ADL06464.1| extracellular solute-binding protein family 3 [Clostridium saccharolyticum WM1] Length = 299 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 44/170 (25%), Positives = 79/170 (46%), Gaps = 16/170 (9%) Query: 18 TSFSTNAS---ILGDIKK---RGFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSA 70 T+ ST A+ + D++K RG LK G + F+ + A G+++GF+ D ++ Sbjct: 44 TAGSTEAAGKGLAADVQKIIDRGVLKVGCKADIPKFSLQNTATGEYEGFEDDLAYEIAGT 103 Query: 71 IF-------DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 IF + +++ + AK R L++ +ID++ +T+ E F Y Sbjct: 104 IFGCTAAEAKEKKLVEFQGVTAKTRGPLLENGEIDLVIAT--FTITPERKETYNFSTPYY 161 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 D G +++K+ GI S+ L G I V +TT+ Y +K +P Sbjct: 162 TDAVGLLVNKESGIDSIEDLDGKIIGVAQSSTTKDGFKKYVDEKGLKVNP 211 >gi|172039490|ref|YP_001805991.1| glutamine-binding protein of glutamine ABC transporter [Cyanothece sp. ATCC 51142] gi|171700944|gb|ACB53925.1| glutamine-binding protein of glutamine ABC transporter [Cyanothece sp. ATCC 51142] Length = 260 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 45/190 (23%), Positives = 84/190 (44%), Gaps = 19/190 (10%) Query: 6 FVSILCLIILF-FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 VS+L + ++F + + A+ L +IK+RG L + + N +G ++D Sbjct: 9 LVSMLIIGVIFNLGNSNLIAATLEEIKQRGKLIVAVKDNVRPLGFRNQNNQLQGLEIDLA 68 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI----LSRNTDWTLLREISLGLAFRP 120 + L+ I DP I P+ +ER + ++D+ ++ N+ L + F P Sbjct: 69 KQLAQDILGDPQAIILQPVQNQERLQKVIDGEVDLAIARITINSSRGRL------VNFSP 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT------ELTLADYFKAHNMKYHPI 174 Y DG G I + + I +V LS I + ++T EL A+ ++ + Sbjct: 123 YYYLDGTGIITNNPR-IRAVDHLSQGKIALLKRSSTIAVIRAELPQAELIGVNSYQEALT 181 Query: 175 VFERVEEIDA 184 + E E++DA Sbjct: 182 LLE-TEQVDA 190 >gi|317406067|gb|EFV86331.1| extracellular solute-binding protein family 3 [Achromobacter xylosoxidans C54] Length = 286 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 47/182 (25%), Positives = 78/182 (42%), Gaps = 16/182 (8%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + L +K+RG L G++ F + A G GF + R +++ + ++ +P+ Sbjct: 25 ATLDRVKQRGKLVVGVDGASPPFGLLDPATGKVGGFQTELGRDIATRLG---VTLETVPV 81 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY-FDGQGFIMHKKKGISSVSQ 142 A R LQ+ ++D+L N WT +E S L++ P Y G ++ K+ GI Sbjct: 82 TAATRVQFLQAGKVDLLIANIQWT--QERSEILSYAPTPYNLVGGAAMVSKRSGIKRWED 139 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIV--FERVEEIDAAYRAHRCDAYTGDISA 200 L G CV G+ ++ K Y +V + E A + CDA A Sbjct: 140 LKGKVACVSQGS-------NFAKPLQETYGAVVKGLRNIPESLLALKGGSCDASVHIQPA 192 Query: 201 LY 202 LY Sbjct: 193 LY 194 >gi|89899769|ref|YP_522240.1| extracellular solute-binding protein [Rhodoferax ferrireducens T118] gi|89344506|gb|ABD68709.1| extracellular solute-binding protein, family 3 [Rhodoferax ferrireducens T118] Length = 280 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 62/248 (25%), Positives = 108/248 (43%), Gaps = 26/248 (10%) Query: 18 TSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 T S NA S L + RG L G + + A+ +GFD+D + +S A+FD+ Sbjct: 18 TGASVNAAGTSKLDQVLARGKLIVGTGSTNAPWHFKSADNKLQGFDIDIAKIISKALFDN 77 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF-DGQGFIMH- 132 P KI+++ ++ R + + ++DI + T R + I YF +G G + Sbjct: 78 PDKIEFVNQSSDARIPNITTDKVDITCQFLTVTGGRAQQVAFT---IPYFREGVGLMTKT 134 Query: 133 -KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA------A 185 K+G + + +GAS+ V L + + A +M + + +V + D+ A Sbjct: 135 GSKRGDYAALKAAGASVNV-------AVLQNVY-AESMVHAALPMAKVAQYDSPDLMYQA 186 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT- 244 + R DA D S++ N P ++ + A A+ +GD +W N V+ Sbjct: 187 LNSGRADAAATDQSSISWFIKQN--PGKYKDAGYGWNPQTYACAVKRGDQDWLNFVNTAL 244 Query: 245 HYAMVTAE 252 H AM E Sbjct: 245 HEAMTGVE 252 >gi|315652801|ref|ZP_07905775.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Eubacterium saburreum DSM 3986] gi|315485003|gb|EFU75411.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Eubacterium saburreum DSM 3986] Length = 289 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 55/226 (24%), Positives = 99/226 (43%), Gaps = 17/226 (7%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 S N L +IKK G + G+ + F V NG+++G+D+ F L D KI Sbjct: 36 SKKNNFRTLDEIKKSGTINIGVFSDKHPFGYVDENGEYQGYDIYFGNKLGE---DLGVKI 92 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 Y+ A R L++ ++D++ N T R ++ A + G G I + + Sbjct: 93 NYVSTEAANRVEYLETGKVDLILANFTVTPERAEAVDFALPYMNV--GLGVISSESNKVD 150 Query: 139 SVSQLSGA-SICVQAGTTTE-LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 S+ + + + V +GTT E + +Y KY + ++ + + A+ Sbjct: 151 SLDNWNASDEMIVISGTTAEPFMIKNYPNIKLQKYDTYANAKNALLNGSGK-----AWVN 205 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT---EWYN 239 D + + A +N P V + D+ K +APA+ +G+T +W N Sbjct: 206 DNTEVLAFAKSN--PGYVVGIDDLGVKDTIAPAVTKGNTTLLDWVN 249 >gi|300725186|ref|YP_003714514.1| putative amino acid ABC transporter ATP-binding protein [Xenorhabdus nematophila ATCC 19061] gi|297631731|emb|CBJ92450.1| putative amino acid-binding protein (ABC superfamily, peri_bind) [Xenorhabdus nematophila ATCC 19061] Length = 282 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 72/267 (26%), Positives = 122/267 (45%), Gaps = 29/267 (10%) Query: 7 VSILCLII-LFFTSFSTNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDF 63 ++I L+ L S A L DIKK G ++ + + GF + + G+DV+ Sbjct: 9 IAITALLTSLALVSGVAKADKLDDIKKAGTVRIAVFDSNPPFGFIDPRTK-KLAGYDVEI 67 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 A++S D K++ P N R L SK+ID+++ N +T+ E + + F I Y Sbjct: 68 ANAIAS---DLGVKLELRPTNPANRIPLLSSKKIDLIAAN--FTVTDERAKQVDFS-IPY 121 Query: 124 F-DGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLAD-YFKAHNMKYH--PIVFER 178 F GQ FI +KG+ ++ ++ I GT E+TL + Y A + Y P+ F Sbjct: 122 FATGQKFIA--RKGVLTNPDDIAKLRIGADKGTVQEITLRERYPTAKVISYDDTPLAF-- 177 Query: 179 VEEIDAAYRAHRCDAYTGDISALYAL--KLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 AA R A T D + L L + + ++ I P I++ A A+ +G+ Sbjct: 178 -----AALRNGNVQAITQDDAKLVGLLANVPEAQKADFEISPFSITREYQAVAVTKGEGR 232 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQ 263 + V+ T ++ E+ G +K N+ Sbjct: 233 LIDAVNQT---LLKLEKEGEAEKIYNR 256 >gi|227824756|ref|ZP_03989588.1| extracellular solute-binding protein [Acidaminococcus sp. D21] gi|226905255|gb|EEH91173.1| extracellular solute-binding protein [Acidaminococcus sp. D21] Length = 279 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 41/154 (26%), Positives = 70/154 (45%), Gaps = 16/154 (10%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANG------DWKGFDVDFCRALSSAIFDDP 75 TN + + LK N V F E K G D+KG ++D R ++ + +P Sbjct: 26 TNKETAKNADAKKVLKIATNATYVPF-EFKDKGTSGDESDYKGMEIDMIREVAKRLGREP 84 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 +++ +P N A+QSKQ+D+ + T T+ +E + +AF Y ++ Sbjct: 85 -QMENIPFNG--IIPAIQSKQVDVAA--TGMTMTKERAKKVAFAAPFYESKLAIVVPTDS 139 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 + S + L G ++ V GTT A Y ++H M Sbjct: 140 PVQSAADLKGKNVAVMVGTTG----AKYAESHGM 169 >gi|332040175|gb|EGI76556.1| extracellular solute-binding protein family 3 [Hylemonella gracilis ATCC 19624] Length = 298 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 12/176 (6%) Query: 30 IKKRGFLKCG--INTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 IK+ G L+ G + L K +G +GFD + ++ I D +K+Q+ + + Sbjct: 56 IKQAGTLRLGGLQTSNLFSLLNEK-DGKTRGFDAGLAQLITRYILGDGAKVQFTQVTSST 114 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSG 145 R L + Q+D++ T R + A Y+ Q ++ K K I S + L+G Sbjct: 115 REQVLINDQVDMVIATYSITPARTEKISFAG---PYYSSQAGVLVKANNKTIQSYNDLAG 171 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 + QAG+T LA Y ++ F+ +E A R R DAY D + L Sbjct: 172 KKVATQAGSTGPTILAQYAPKGVVQE----FQTHQEALDALRQGRVDAYVTDYTLL 223 >gi|322421250|ref|YP_004200473.1| family 3 extracellular solute-binding protein [Geobacter sp. M18] gi|320127637|gb|ADW15197.1| extracellular solute-binding protein family 3 [Geobacter sp. M18] Length = 271 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 58/237 (24%), Positives = 104/237 (43%), Gaps = 20/237 (8%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L D+KK+G L G+ L F V + + + G+D+DF + ++ + K++ P+ + Sbjct: 27 LADVKKKGVLVAGVKDSLPPFGYVDEKSREIVGYDIDFVKYIAKKL---GVKVELKPVTS 83 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 R L IDI++ T E + + F + GQ FI KK + S+ L G Sbjct: 84 ASRMPQLMEGNIDIIAAT--MTKNPERAKQIDFSHTYFLTGQKFIT-KKGAVKSLKDLEG 140 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL- 204 I G+T+E +A + + F+ + A + + A T D S L + Sbjct: 141 KKIGTAKGSTSEQNVAKAIPTATV----LSFDDYPQAFLALQQGKVAAVTTDESILAGIL 196 Query: 205 -KLTNDRPSEHVILPDI-ISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 K N E +P++ IS+ P + + D N V++ + ++ E+ G +K Sbjct: 197 GKAPNKNKFE---IPNLQISEEPYGLGMRKDDK---NFVAFVNKTLLEMEKNGEAKK 247 >gi|89091825|ref|ZP_01164780.1| putative ABC transporter periplasmic amino acid-binding protein [Oceanospirillum sp. MED92] gi|89083560|gb|EAR62777.1| putative ABC transporter periplasmic amino acid-binding protein [Oceanospirillum sp. MED92] Length = 275 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 43/145 (29%), Positives = 65/145 (44%), Gaps = 5/145 (3%) Query: 13 IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72 I + +S + A L ++ KRG L CG+ + GFDVD+C L++A+ Sbjct: 14 IAVMASSVTAQADQLDEVIKRGTLNCGVVLDFPPMGYFDKDNKPAGFDVDYCNDLAAAL- 72 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 K L L +R +L S + D++ +T TL R S+G + P F Q I Sbjct: 73 --GVKSNVLNLTWGDRIPSLVSGKTDVVIGSTSDTLERAKSVGFTY-PYFVFKFQT-ISK 128 Query: 133 KKKGISSVSQLSGASICVQAGTTTE 157 K I+S + L + GTT E Sbjct: 129 KGTPINSFADLKNVKVGAALGTTYE 153 >gi|313673708|ref|YP_004051819.1| amino acid abc transporter substrate-binding protein, paat family [Calditerrivibrio nitroreducens DSM 19672] gi|312940464|gb|ADR19656.1| amino acid ABC transporter substrate-binding protein, PAAT family [Calditerrivibrio nitroreducens DSM 19672] Length = 264 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 58/246 (23%), Positives = 111/246 (45%), Gaps = 16/246 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K F++++ + +LF T F+ + S L I KRG +K G++T V +A +G+W GF++ Sbjct: 2 KRIFLALIMIFMLFATGFAEDKKSTLDSIIKRGKMKVGMST-FVPWAMQTKSGEWIGFEI 60 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D + L+ D I+++P +L + DI+ T R + + + P Sbjct: 61 DVAKRLAK---DMGVGIEFVPTKWSGIIPSLLTGNYDIIIGGMGITPERALKVEFSI-PY 116 Query: 122 TYFDGQGFIMHKKK-GISSVSQLSGASICVQA--GTTTELTLADYFKAHNMKYHPIVFER 178 Y G + ++ K +S+ +L+ + + A GTT T +F +K + Sbjct: 117 DY-SGMAIVANRSKTKANSLKELNNPDVTIVARLGTTAAETAKKFFPRAQLKLFDDEPQA 175 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 ++E+ R A+ + L A + + + +K P+ A+ +GD E+ Sbjct: 176 IQEL----LNGRATAFISS-APLPAFLAIDHSSKLYQPVKGTFTKEPIGFAVRKGDQEFL 230 Query: 239 NIV-SW 243 N + SW Sbjct: 231 NYLNSW 236 >gi|124265636|ref|YP_001019640.1| amino-acid ABC transporter binding protein [Methylibium petroleiphilum PM1] gi|124258411|gb|ABM93405.1| amino-acid ABC transporter binding protein [Methylibium petroleiphilum PM1] Length = 297 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 54/251 (21%), Positives = 104/251 (41%), Gaps = 6/251 (2%) Query: 8 SILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 S+L L+ L T + L +K G + G+ + + G+ V C Sbjct: 4 SLLILVTALAATGLAQAEDTLKKVKDSGAITLGVRESSGVLSYTLGGAKYVGYHVAICEK 63 Query: 67 LSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 I K+ Y P+ ++ R +Q+ +D+ +T R+ + AF T+ Sbjct: 64 AVEDIEKAVGRKLKVNYQPVTSQNRIPLVQNGTVDLECGSTTNNATRQKDV--AFANTTF 121 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 + + GI S++ L G ++ GTT+ TL +A NM++ + + + Sbjct: 122 VEEVRMAVKTSSGIKSIADLQGKTVATTTGTTSVQTLRKNKRAENMEFKEVFGKDHSDSF 181 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 + R D + D S L L + P++ I+ +++S P+A + + D +V+ Sbjct: 182 LLVDSGRADVFVMDGSLLAGLIARSKNPADFKIVGEVLSVEPIAIMMRKDDEALLKLVNA 241 Query: 244 THYAMVTAEEL 254 T MV + E+ Sbjct: 242 TIAGMVKSGEI 252 >gi|146337810|ref|YP_001202858.1| ABC transporter substrate-binding protein [Bradyrhizobium sp. ORS278] gi|146190616|emb|CAL74618.1| Putative ABC transporter (substrate binding protein) [Bradyrhizobium sp. ORS278] Length = 308 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 37/138 (26%), Positives = 65/138 (47%), Gaps = 6/138 (4%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQYLP 82 L IK R + G F+ + G G+ ++ C A+ I DDP +I Y+ Sbjct: 38 LAAIKARHVVNLGYRESSPPFSFLDQAGRPIGYSLELCEAIVEEIGGEIDDPGLRIAYVK 97 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + + +R A+ + +ID+ +T T E S ++F P+ + G ++ K ++S + Sbjct: 98 VTSDDRIDAVVAGRIDLECGST--TANAERSRQVSFSPLIFVAGTKLMVSKGSPVASATD 155 Query: 143 LSGASICVQAGTTTELTL 160 L G S+ V GTT E + Sbjct: 156 LRGKSVVVTKGTTNEAAM 173 >gi|90419462|ref|ZP_01227372.1| putative solute-binding protein [Aurantimonas manganoxydans SI85-9A1] gi|90336399|gb|EAS50140.1| putative solute-binding protein [Aurantimonas manganoxydans SI85-9A1] Length = 259 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 54/186 (29%), Positives = 81/186 (43%), Gaps = 17/186 (9%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 L G N G V + N + GF+VD + ++ + D IQ +P N F A+QS Sbjct: 21 LTAGANIGNVPWEFQDENSEIVGFEVDLLKKVADRLGYDEVDIQNVPFNG--LFSAVQSG 78 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDG-QGFIMHKKKGISSVSQLSGASICVQAGT 154 +ID+ + T R S+ A +P Y+D Q GI+ L G ++ V G+ Sbjct: 79 RIDVAISSITITDERLQSVSFA-QP--YYDSDQSLSTRADSGIAGSGDLKGKTVGVDTGS 135 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAY---RAHRCDAYTGDISAL-YALKLTNDR 210 T ++ Y ++ R E + A A R DAY DI A+ Y LK D+ Sbjct: 136 TGDI----YSTERESEWGLAGISRYEGLSPAMLDLAAGRIDAYVSDIPAVAYYLK---DK 188 Query: 211 PSEHVI 216 P V+ Sbjct: 189 PEMKVV 194 >gi|257892422|ref|ZP_05672075.1| extracellular solute-binding protein [Enterococcus faecium 1,231,408] gi|294614008|ref|ZP_06693938.1| glutamine-binding protein [Enterococcus faecium E1636] gi|257828801|gb|EEV55408.1| extracellular solute-binding protein [Enterococcus faecium 1,231,408] gi|291593115|gb|EFF24694.1| glutamine-binding protein [Enterococcus faecium E1636] Length = 244 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 53/214 (24%), Positives = 95/214 (44%), Gaps = 21/214 (9%) Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 +T L G ++++ +GFDVD +A++ I D K +++ + +K R L++ ID + Sbjct: 23 DTRLFGMMDIESRT-VQGFDVDIAKAITKKILGDNGKTEFVEVTSKTRIPLLKNGNIDAI 81 Query: 101 SRNTDWTLLREISLGLAFRPITYFD-GQGFIMHKKKGISSVSQLSGASICVQAGTTTELT 159 T+ E + F + YFD GQ ++ K I SV L+ +TT L Sbjct: 82 IAT--MTITDERKKQVDFSDV-YFDAGQALLVKKGSQIKSVDDLN--------ASTTVLA 130 Query: 160 LADYFKAHNMKYHP-----IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 + A N++ H + E E A ++ + DA T D + L L + ++ P E+ Sbjct: 131 VKGSTSAANIRQHAPDAKILELENYAEAFTALQSGQGDAMTTDNAIL--LGIADENP-EY 187 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 ++ + P AI +G + V+ M Sbjct: 188 ELVGGTFTNEPYGIAINKGQENFLKAVNQALEEM 221 >gi|222148131|ref|YP_002549088.1| ABC transporter substrate binding protein (amino acid) [Agrobacterium vitis S4] gi|221735119|gb|ACM36082.1| ABC transporter substrate binding protein (amino acid) [Agrobacterium vitis S4] Length = 260 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 39/164 (23%), Positives = 69/164 (42%), Gaps = 13/164 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M++ +++ + F +A LGDI KRG LK + F V + G+D Sbjct: 1 MHRRTLLALGLSLATFAAVLPAHADALGDITKRGTLKVAVPQDFPPFGSVGTDMQPVGYD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI----LSRNTDWTLLREISLGL 116 +D ++ + K++ +P+ + R LQ+ ++D+ L +N D + + Sbjct: 61 IDTAALIAKKLG---VKLELVPVTSANRIPYLQTNKVDLVISSLGKNPDRE--KVVDFST 115 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 A+ P G I S + LSG S+ V G +L L Sbjct: 116 AYAPFY----NGVFAPADTAIKSAADLSGKSVGVTRGAVEDLEL 155 >gi|73537816|ref|YP_298183.1| extracellular solute-binding protein [Ralstonia eutropha JMP134] gi|72121153|gb|AAZ63339.1| extracellular solute-binding protein, family 3 [Ralstonia eutropha JMP134] Length = 311 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 52/248 (20%), Positives = 96/248 (38%), Gaps = 8/248 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 +++ +L + L + +L I+ G + G + F+ G G+ Sbjct: 18 LFRPLTALLLAVATLSPLGARAQSPVLDKIRDSGTIVLGYRESALPFSFADDKGQPAGYA 77 Query: 61 VDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 VD C ++ A K+++LPL + RF A+ + +D+ +L R+ + Sbjct: 78 VDLCLRVAEAARQKLGLKDIKVRWLPLTPQNRFPAVVNGLVDLDCAPNTNSLERQKQV-- 135 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 AF Y ++ GI S L G ++ AG+T + + + + Y + Sbjct: 136 AFSVSHYVSTVRMLVRADSGIQSFEDLRGKTVVTSAGSTGDRHVRRLKQQYG--YRDVYA 193 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + E + R A+ D L L+ PS+ VI+ +S A + + D E Sbjct: 194 KDHGESFLLLESGRAQAFVMDDVLLAGLRARAKDPSQFVIVGPALSTEQNALMMSKADPE 253 Query: 237 WYNIVSWT 244 W V T Sbjct: 254 WKRFVDQT 261 >gi|322831658|ref|YP_004211685.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602] gi|321166859|gb|ADW72558.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602] Length = 263 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 13/151 (8%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 +L + S A L DI+KRG L+ + F V + +G+D+D L+ + Sbjct: 15 MLVLQASSVMADQLQDIQKRGVLRVAVPQDFPPFGSVSKDLQPEGYDIDMAHYLADKM-- 72 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE--ISLGLAFRP--ITYFDGQGF 129 K+Q +P+ + R LQ+ ++D++ + RE I A+ P + F QG Sbjct: 73 -KLKLQLVPVTSANRVPYLQTDKVDLVISSLGKNAEREKVIDFSNAYAPFFLGVFGAQG- 130 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTL 160 +S + +LSG +I V G +L L Sbjct: 131 -----DKLSDLKELSGKTIGVTRGAVEDLAL 156 >gi|311103230|ref|YP_003976083.1| glutamate/aspartate periplasmic-binding protein 1 [Achromobacter xylosoxidans A8] gi|310757919|gb|ADP13368.1| glutamate/aspartate periplasmic-binding protein 1 [Achromobacter xylosoxidans A8] Length = 295 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 49/233 (21%), Positives = 98/233 (42%), Gaps = 6/233 (2%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQYL 81 IL IK +G + G + F+ + G+ +D C + A+ P+ K+ Y+ Sbjct: 35 ILERIKAKGTITLGYRESSIPFSYLDDARKPVGYAMDLCMKVVDAVRQRLQMPALKVDYI 94 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 +N + R + + +D+ +T +L R+ + F + ++ K I V Sbjct: 95 AVNPQNRIALVANGTVDLECGSTVNSLGRQAQVD--FSAPHFISTTRLLVRKGADIKEVE 152 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L+G ++ + TT E + +A N++ + E A R DA++ D L Sbjct: 153 DLNGKAVALPINTTPERLIKALIEAKNLQVRIVPVRDNSEGFLALSTGRADAFSTDDILL 212 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 Y L+ + P + ++ +S P + + T + ++V+ T V + EL Sbjct: 213 YGLRKSAPTPVDFEVVGRPLSFDPYGLMLQKNSTVFLSLVNATIARSVRSGEL 265 >gi|254504719|ref|ZP_05116870.1| Bacterial extracellular solute-binding protein, family 3 [Labrenzia alexandrii DFL-11] gi|222440790|gb|EEE47469.1| Bacterial extracellular solute-binding protein, family 3 [Labrenzia alexandrii DFL-11] Length = 262 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 50/219 (22%), Positives = 97/219 (44%), Gaps = 17/219 (7%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L DI G +K F + A+G+++G+D+D + ++ D +++ +P+ +K Sbjct: 27 LKDILAAGKIKIATPENFPPFGALGADGEYEGYDIDVAKMIAE---DLGVELELVPVTSK 83 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 +R L++ ++D++ R S+ + +F G +SS++ +G Sbjct: 84 QRIPFLETDRVDLVIATLGANPERAKSIWFSHAYAPFFSGA--FAKPDVAVSSIADFAGK 141 Query: 147 SICVQAGTTTELTLA-DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA-YTGDISALYAL 204 I V GT +L + D + I F AAY + + D TG+ + AL Sbjct: 142 KIAVTGGTLEDLAITEDAPDGAEI----IRFGDNAATIAAYVSGQADVIVTGN---MVAL 194 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDT---EWYNI 240 ++ND P ++ II+ SP + G+ +W N+ Sbjct: 195 GISNDNPEFNLEPKFIIANSPSFIGVKTGNMDLLQWVNV 233 >gi|257461101|ref|ZP_05626199.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] gi|257441475|gb|EEV16620.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] Length = 267 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 60/227 (26%), Positives = 95/227 (41%), Gaps = 14/227 (6%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 L S S A+ L IK++G ++ GI+ L + V +G + GF++ LS IF D Sbjct: 8 LLIASCSLFANSLAQIKEKGLIRIGIDGSLPPLS-VSEDGKYSGFEISLIEELSKEIFGD 66 Query: 75 P-SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ-GFIMH 132 KI+Y+ +R A+Q ++D+ T RE + + P YF G + Sbjct: 67 KGGKIEYVVTLGNDRITAVQDNKVDLDIAAITVTKEREKLVDFS-NP--YFSVNIGVLTR 123 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 I +V L I + GTT DYF K I E A ++ R Sbjct: 124 TDDNIKTVDDLQDKEILAEPGTTA----FDYFNKEGFKV--ISCASSSECFRALKSGRGS 177 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 Y D + + DR E V + ++ + LA A+ +G+ + N Sbjct: 178 GYADDNMVVLGYSVV-DRKVE-VNIKNLGTTDFLAIAVQKGNDDLLN 222 >gi|329296932|ref|ZP_08254268.1| family 3 extracellular solute-binding protein [Plautia stali symbiont] Length = 261 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 9/141 (6%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 A L DI+KRG ++ + F V N +G+D+D + L+ + K+Q +P+ Sbjct: 23 ADQLQDIQKRGVIRVAVPQDFPPFGSVGTNLQPQGYDIDMAKYLAKQM---KLKLQLVPV 79 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLRE--ISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 + R LQ+ ++D++ + RE I A+ P +F G K + + + Sbjct: 80 TSANRVPYLQTDKVDLVISSMGKNAEREKVIDFSRAYAP--FF--LGVFGPKGETLKDAA 135 Query: 142 QLSGASICVQAGTTTELTLAD 162 LSG SI V G ++ L+D Sbjct: 136 ALSGKSIGVTRGAVEDMVLSD 156 >gi|239979493|ref|ZP_04702017.1| putative ABC transporter solute-binding protein [Streptomyces albus J1074] Length = 312 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 31/112 (27%), Positives = 56/112 (50%), Gaps = 9/112 (8%) Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL--L 109 A G +GFD+D RA++ + DP + + + R A+ S ++D++ R T + Sbjct: 93 ATGSLEGFDIDLVRAIAEELMGDPEAVVFRAIPTNRRVQAIDSGEVDMVVRTMTITCDRI 152 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISS-VSQLSGASICVQAGTT--TEL 158 +E++ A+ + GQ ++ K I+ + L G +C AG+T TEL Sbjct: 153 KEVAFSTAY----FETGQQLLVPKGSRITGHDTSLKGRKVCAAAGSTALTEL 200 >gi|152985442|ref|YP_001349486.1| putative ABC transporter binding protein subunit [Pseudomonas aeruginosa PA7] gi|150960600|gb|ABR82625.1| probable binding protein component of ABC transporter [Pseudomonas aeruginosa PA7] Length = 273 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 44/145 (30%), Positives = 69/145 (47%), Gaps = 7/145 (4%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 A L DI + G L+C + A + GFDVD+C L+ A+ D ++I P Sbjct: 24 QADKLDDIIESGKLRCAVTLDFPPMGSRDAQNNPVGFDVDYCNDLAKAL-DVKAEIVETP 82 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVS 141 +R AL S + D++ +T TL R ++G++ I YF ++ ++ GI+S + Sbjct: 83 F--PDRIPALVSGRADVIVASTSDTLERARTIGMS---IPYFAFVKVVLTREDTGIASYA 137 Query: 142 QLSGASICVQAGTTTELTLADYFKA 166 L G + AGT L L KA Sbjct: 138 DLKGRPVGGTAGTFEALALEKDSKA 162 >gi|326790342|ref|YP_004308163.1| ABC transporter periplasmic protein [Clostridium lentocellum DSM 5427] gi|326541106|gb|ADZ82965.1| ABC-type transporter, periplasmic subunit family 3 [Clostridium lentocellum DSM 5427] Length = 280 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 43/157 (27%), Positives = 68/157 (43%), Gaps = 11/157 (7%) Query: 30 IKKRGFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFD-------DPSKIQYL 81 IK G LK G + F + A G+++G ++D ++ IFD + + + Sbjct: 43 IKDAGVLKVGCKIDVPSFGLQNTATGEYEGVEIDLAYEIAGKIFDCTAAEAKEKKLVAFQ 102 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 + AK R L S +ID++ +T+ E F Y D G ++ K GI S++ Sbjct: 103 GVTAKTRGGLLDSGEIDLVIAT--FTVTEERKESWNFSTPYYTDAVGLMVLKDSGIQSIN 160 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 L G I V G+ T+ Y K + P VFE Sbjct: 161 DLDGKIIGVSQGSITKDGFEAYIKETGINVTP-VFEE 196 >gi|261822707|ref|YP_003260813.1| extracellular solute-binding protein family 3 [Pectobacterium wasabiae WPP163] gi|261606720|gb|ACX89206.1| extracellular solute-binding protein family 3 [Pectobacterium wasabiae WPP163] Length = 268 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 77/173 (44%), Gaps = 10/173 (5%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K ++++ +L + S A L DI+KRG L+ + F V + +G+D+D Sbjct: 9 KKGLLAVMGAAMLLVQAGSAMADQLQDIEKRGVLRVAVPQDFPPFGSVGTDLQPQGYDID 68 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE--ISLGLAFRP 120 R L+ + +Q +P+ + R LQ+ ++D++ + RE I A+ P Sbjct: 69 IARYLAKEM---KLTLQLVPVTSANRVPYLQTNKVDLVISSLGKNAEREKVIDFSRAYAP 125 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF-KAHNMKYH 172 +F G K ++S L G SI V G ++ L + KA +K + Sbjct: 126 --FF--LGVFGPKDSALASSEALEGKSIGVTRGAVEDMVLTETAPKAAQIKRY 174 >gi|91781298|ref|YP_556505.1| polar amino acid ABC transporter periplasmic ligand-binding protein [Burkholderia xenovorans LB400] gi|91693958|gb|ABE37155.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia xenovorans LB400] Length = 267 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 61/240 (25%), Positives = 106/240 (44%), Gaps = 33/240 (13%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGD-IKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + K ++ L L + FT+ + +A L D +K+ G L+ G+ F ++G +GF Sbjct: 3 LSKRLLINALALSAVGFTAVAAHAEDLLDTVKQAGVLRIGLEGTYPPFDYRNSDGQLEGF 62 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD +A+++ + P Q++P ALQS + D++ T R+ L + + Sbjct: 63 DVDVAKAVATKLGVKP---QFIPTEWSGIIAALQSGKFDVIVNQVTITPQRKQVLDFS-Q 118 Query: 120 PITYFDGQGFIMH--KKKGISSVSQLSG-ASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 P TY Q I K+ S+ + G + V GT + +A N++ +P Sbjct: 119 PYTYSAAQ-LIQRTDDKREFRSLDEFKGDKKLGVTLGTNYD-QMARAVPGINVQTYPGAP 176 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS--PLAP-AIIQG 233 E++ ++ A R DA D ++LP II S PL P A+++G Sbjct: 177 EKLSDL----AAKRIDATIDD----------------RLMLPYIIKTSQLPLRPGAVLKG 216 >gi|34556716|ref|NP_906531.1| binding component of ABC transporter [Wolinella succinogenes DSM 1740] gi|34482430|emb|CAE09431.1| BINDING COMPONENT OF ABC TRANSPORTER [Wolinella succinogenes] Length = 267 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 54/219 (24%), Positives = 95/219 (43%), Gaps = 14/219 (6%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L +I KRG L+ G+ G + F G+ GFDVD R ++ A+ K++ +P + Sbjct: 26 STLNEIIKRGELRVGLEPGYLPFEMKDKKGNVIGFDVDLAREMAKAM---GVKLKLVPTS 82 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQ 142 L +++ DI+ T+ +E +L + F GQ ++ K +KG+ S Sbjct: 83 WDGLIPGLVTEKFDIIISGM--TISQERNLRVNFVEPYIVVGQSLLVKKGLEKGVKSYKD 140 Query: 143 LSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L ++ + G + E FK +K + E V+E+ + D + D+ Sbjct: 141 LDKPELTLVTKFGVSAEYAAKRLFKNAKLKTYDTEAEAVQEV----LNGKADMFIFDLPF 196 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 A + V L ++ PL AI +GD ++ N Sbjct: 197 NVAF-MAQKGQGYLVHLDTSLTYEPLGWAIKKGDPDFLN 234 >gi|149201666|ref|ZP_01878640.1| polar amino acid uptake family ABC transporter, periplasmic substrate-binding protein [Roseovarius sp. TM1035] gi|149144714|gb|EDM32743.1| polar amino acid uptake family ABC transporter, periplasmic substrate-binding protein [Roseovarius sp. TM1035] Length = 269 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 42/197 (21%), Positives = 81/197 (41%), Gaps = 13/197 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + + + L ++ TS + A L DIK G + G+ + + ++G+ +G ++D Sbjct: 2 RTYIKAALTAVVATLTSTAAMADALQDIKDAGKIVVGVKQDYKPWGYLTSDGELQGLEID 61 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + ++ + +++ +P+ A R LQ +I+++ R +G+ P Sbjct: 62 LAKDVAERLG---VEVELVPVVASNRMEFLQQGRINLIIATMGDNEQRRQVIGM-IEPNY 117 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP--IVFERVE 180 Y G + K G+ + L GA +C G+ Y K Y P + F + Sbjct: 118 YAGGTNVLAPKAAGLKNWEDLKGADVCALQGSY-------YNKRVTQLYGPNLVAFAGIP 170 Query: 181 EIDAAYRAHRCDAYTGD 197 E AA C A+ D Sbjct: 171 EATAALLNGSCIAFLYD 187 >gi|50122416|ref|YP_051583.1| putative amino acid ABC transporter substrate binding protein [Pectobacterium atrosepticum SCRI1043] gi|49612942|emb|CAG76393.1| putative amino acid ABC transporter, substrate binding protein [Pectobacterium atrosepticum SCRI1043] Length = 268 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 77/173 (44%), Gaps = 10/173 (5%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K ++++ +L + S A L DI+KRG L+ + F V + +G+D+D Sbjct: 9 KKGLLAVMGAAMLLVQAGSVMADQLQDIEKRGVLRVAVPQDFPPFGSVGTDLQPQGYDID 68 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE--ISLGLAFRP 120 R L+ + +Q +P+ + R LQ+ ++D++ + RE I A+ P Sbjct: 69 IARYLAKEM---KLTLQLVPVTSANRVPYLQTNKVDLVISSLGKNAEREKVIDFSRAYAP 125 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF-KAHNMKYH 172 +F G K ++S L G SI V G ++ L + KA +K + Sbjct: 126 --FF--LGVFGPKDSALASSEALEGKSIGVTRGAVEDMVLTETAPKAAQIKRY 174 >gi|159027770|emb|CAO89640.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 260 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 6/138 (4%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 SFS + L I +RG L + L A + + G+ +G ++D + L+S I S I Sbjct: 18 SFSAD---LDTIIRRGKLIVAVKNNLPPLAFLDSQGNLQGLEIDIAKRLASEILGSDSAI 74 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 P++ +ER + ++D+ T R+ + F P Y D GF+ K + Sbjct: 75 ILKPVSNQERLQVVIDDRVDLAIARVAITPARQRLVD--FSPFYYLDSSGFV-TKNPQLQ 131 Query: 139 SVSQLSGASICVQAGTTT 156 + L+ + I V G+TT Sbjct: 132 RLEDLANSRIAVLNGSTT 149 >gi|291451363|ref|ZP_06590753.1| sugar-binding protein [Streptomyces albus J1074] gi|291354312|gb|EFE81214.1| sugar-binding protein [Streptomyces albus J1074] Length = 321 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 31/112 (27%), Positives = 56/112 (50%), Gaps = 9/112 (8%) Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL--L 109 A G +GFD+D RA++ + DP + + + R A+ S ++D++ R T + Sbjct: 102 ATGSLEGFDIDLVRAIAEELMGDPEAVVFRAIPTNRRVQAIDSGEVDMVVRTMTITCDRI 161 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISS-VSQLSGASICVQAGTT--TEL 158 +E++ A+ + GQ ++ K I+ + L G +C AG+T TEL Sbjct: 162 KEVAFSTAY----FETGQQLLVPKGSRITGHDTSLKGRKVCAAAGSTALTEL 209 >gi|294629391|ref|ZP_06707951.1| amino acid ABC transporter, amino acid-binding protein [Streptomyces sp. e14] gi|292832724|gb|EFF91073.1| amino acid ABC transporter, amino acid-binding protein [Streptomyces sp. e14] Length = 350 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 6/130 (4%) Query: 30 IKKRGFLKCGI--NTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 I++RG+L G+ N+ G+ A+G +GFD+D ++ I D K+Q+ + Sbjct: 97 IRQRGYLSVGVDQNSYRWGYRNPNNASGALEGFDIDLAHRIAEDILGDGDKVQFRAIPTN 156 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSG 145 ER A++S ++D++ R T R +AF + GQ + + I+ + L+G Sbjct: 157 ERVNAIRSGRVDMVVRTMTITCDRLDQ--VAFSAPYFLTGQQVLAPRTSAITGYDKSLAG 214 Query: 146 ASICVQAGTT 155 +C G+T Sbjct: 215 KRVCSATGST 224 >gi|15643359|ref|NP_228403.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Thermotoga maritima MSB8] gi|4981112|gb|AAD35678.1|AE001734_5 amino acid ABC transporter, periplasmic amino acid-binding protein [Thermotoga maritima MSB8] Length = 246 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 61/248 (24%), Positives = 109/248 (43%), Gaps = 29/248 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K VSIL + I+ F+ + +IK RG+L G++ F V NG+ GFD Sbjct: 1 MKKLLAVSILLVSIVIFSG------AIDEIKSRGYLLVGLSADFPPFEFVDENGNIVGFD 54 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + ++ + +++ + + +L +K+ID++ + T+ E +AF Sbjct: 55 VDLAKEIARRL---GVELKIVDMTFDGLIPSLLTKKIDVII--SGMTITEERKKVVAFSD 109 Query: 121 ITYFD-GQGFIMHKKKGI--SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 YFD GQ ++ K + L G ++ VQ GTT ++ ++ KY I Sbjct: 110 -PYFDAGQVIVVRKDSDFRPKTYEDLVGKTVAVQIGTTGDIEVS--------KYDGIKVV 160 Query: 178 RVEEIDAAY---RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 R ++ A+ + R DA D + A N + VI ++S A+ + D Sbjct: 161 RFDKFTDAFLELKRGRADAVVLDSATARAFVAKN---PDLVISSGVLSSEQYGIAVRKED 217 Query: 235 TEWYNIVS 242 T+ ++ Sbjct: 218 TDLLEFIN 225 >gi|312958493|ref|ZP_07773013.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas fluorescens WH6] gi|311287036|gb|EFQ65597.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas fluorescens WH6] Length = 266 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 61/251 (24%), Positives = 105/251 (41%), Gaps = 19/251 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++ L + +A + D +RG L+ G V F G GF+ Sbjct: 1 MIKRYCLAALICVAALIQHNLAHAGAIDDAARRGVLRVGTTPTYVPFEMTDKQGRIVGFE 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D ++S A+ K++ + + E L +K+ D++ + T+ +E +L L F Sbjct: 61 IDLLASMSQAL---GVKLELVSVPYTELLPGLMAKKFDLI--GSGMTVTQERNLKLNFSD 115 Query: 121 ITYFDGQGFIMHKK--KGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 GQ ++H +SSV L +G I V GTT E A + + F Sbjct: 116 SFIVVGQTVLLHPSLLGKVSSVEDLDDAGYRIAVTEGTTGEAVAQRLLGAARL----LSF 171 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYAL-KLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 EE + DA+ D A Y L L+ SE + L + PLA + +GD Sbjct: 172 ATPEEGVRQVVRGQADAFIYD--APYNLIALSRPENSELLALEQPFTFEPLAFGVKKGD- 228 Query: 236 EWYNIVSWTHY 246 ++ ++W ++ Sbjct: 229 --FDSLNWINH 237 >gi|313106245|ref|ZP_07792494.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa 39016] gi|310878996|gb|EFQ37590.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa 39016] Length = 273 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 7/145 (4%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 A L DI + G L+C + A + GFDVD+C L+ A+ D ++I P Sbjct: 24 QADKLDDIIESGKLRCAVTLDFPPMGSRDAQNNPVGFDVDYCHDLAKAL-DVKAEIVETP 82 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVS 141 +R AL S + D++ +T TL R ++G++ I YF ++ ++ GI+S Sbjct: 83 F--PDRIPALVSGRADVIVASTSDTLERAKTIGMS---IPYFAFVKVVLTREDTGIASYE 137 Query: 142 QLSGASICVQAGTTTELTLADYFKA 166 L G + AGT L L KA Sbjct: 138 DLKGRPVGGTAGTFEALALEKDSKA 162 >gi|91782144|ref|YP_557350.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia xenovorans LB400] gi|296162005|ref|ZP_06844804.1| extracellular solute-binding protein family 3 [Burkholderia sp. Ch1-1] gi|91686098|gb|ABE29298.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia xenovorans LB400] gi|295887749|gb|EFG67568.1| extracellular solute-binding protein family 3 [Burkholderia sp. Ch1-1] Length = 267 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 39/160 (24%), Positives = 75/160 (46%), Gaps = 9/160 (5%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + + ++L +L T+ + +A L +I K G LK + F V A+ +G+D+D Sbjct: 11 RAWLAALLLSPVLAITAPAAHADTLDNIAKAGVLKVAVPEDYPPFGSVGADMKPQGYDID 70 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE--ISLGLAFRP 120 L+ ++ K++ +P+N+ R LQ+ ++D++ + T RE I A+ P Sbjct: 71 TAALLAKSMN---VKLELVPVNSANRIPYLQTGKVDLVISSLGKTPEREKVIDFSTAYAP 127 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 Y+ QG +S + L+G ++ G E+ L Sbjct: 128 --YY--QGVFGPADIKVSGPADLTGKTVGATRGALEEIGL 163 >gi|294782141|ref|ZP_06747467.1| CjaA protein [Fusobacterium sp. 1_1_41FAA] gi|294480782|gb|EFG28557.1| CjaA protein [Fusobacterium sp. 1_1_41FAA] Length = 293 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 57/225 (25%), Positives = 100/225 (44%), Gaps = 26/225 (11%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 A + +IK G ++ G+ T F + NG +G+DV F L+ D +++Y+ L Sbjct: 45 ARTVQEIKDSGVIRIGVFTDKAPFGYIDENGKNQGYDVYFTDRLAK---DLGVQVEYISL 101 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 + R ++ + DI++ N T R ++ L + ++ G + I SV Sbjct: 102 DPASRVEYAETGKADIVAANFTVTPERAEKVDFSLPYMKVSL----GVVSPDGAVIKSVE 157 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIV-FERVEEIDAAYRA---HRCDAYTGD 197 +L ++ V GTT E YF K HP V ++ + AY A R DA++ D Sbjct: 158 ELKDKTLIVSKGTTAEY----YFS----KNHPEVKLQKYDSYADAYNALLDGRGDAFSTD 209 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT---EWYN 239 + + A +N P V + + +A A+ +G+T +W N Sbjct: 210 NTEVLAWAKSN--PGFTVGIESLGDVDTIAVAVQKGNTDLLDWIN 252 >gi|209518146|ref|ZP_03266975.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] gi|209501450|gb|EEA01477.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] Length = 266 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 50/197 (25%), Positives = 88/197 (44%), Gaps = 14/197 (7%) Query: 5 FFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 + L L L FT+ + +A +L +K+ G LK G+ F +G+ +GFDVD Sbjct: 6 LLIGALALFALGFTAVAAHAEDLLDSVKQAGVLKIGLEGTYPPFDSRNKDGELEGFDVDV 65 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 +A+++ + P +++P ALQS + D++ T R+ L + +P TY Sbjct: 66 AKAVAAKLGVKP---EFIPTEWSGIIAALQSGKFDVIINQVTITPQRKQVLDFS-QPYTY 121 Query: 124 FDGQGFIMH--KKKGISSVSQLSG-ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Q I K+ S+ + G + V GT + +A N++ +P E++ Sbjct: 122 SAAQ-LIQRADDKREFKSLDEFKGDKKLGVTLGTNYD-QMARAVPGINVQTYPGAPEKLR 179 Query: 181 EIDAAYRAHRCDAYTGD 197 ++ A R DA D Sbjct: 180 DL----AAKRIDATIDD 192 >gi|27379088|ref|NP_770617.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] gi|27352238|dbj|BAC49242.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] Length = 265 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 55/229 (24%), Positives = 101/229 (44%), Gaps = 21/229 (9%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 +A L D+ G L+ GI T + G+ G D D R +++ D K++ + Sbjct: 24 AHADKLQDVLGSGKLRVGILTDAAPWGFKDDKGEIAGLDADLARLIAA---DMGVKLELV 80 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 P+ R +L S +ID+L T R + + +P + ++ K + S + Sbjct: 81 PVTGAARIPSLLSDKIDMLIAGLGATPERAQQVMFS-QPYAVVN---LGVYGAKSLPSAT 136 Query: 142 -----QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 L G S+ V G+T ++ L D + K + FE AA+ A + D + Sbjct: 137 SKKPDNLDGRSVAVAKGSTLDVWLTD----NAPKVKLVRFEDTPAALAAFLAGQADTFAE 192 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + + ALK+ + P++ V L +I +SP + QG+ N+++W + Sbjct: 193 N--SAIALKVQDQNPTKEVELKFLIRQSPAHVGVRQGE---QNLLNWIN 236 >gi|59714167|ref|YP_206942.1| transglycosylase [Vibrio fischeri ES114] gi|59482415|gb|AAW88054.1| predicted transglycosylase [Vibrio fischeri ES114] Length = 485 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 42/150 (28%), Positives = 71/150 (47%), Gaps = 6/150 (4%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 F+ + +I L T+ +N + L IKKRGFL T L G G +G + + + Sbjct: 48 FIFVPEIIYLSSTNNKSNKNTLEKIKKRGFLLVA--TKLDGVGCYYKRGQLRGIECELLQ 105 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ + D I + P + F AL +K++DI++ +D T E F + Sbjct: 106 EYANYL-DVELNILFFP-DLHSLFTALDNKRVDIIA--SDLTPNNERKKKFLFSNALFHT 161 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTT 155 + I K IS++ QL+G +I ++ GTT Sbjct: 162 EEWLIQRKDNAISNLKQLNGKTISIRKGTT 191 >gi|239817008|ref|YP_002945918.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] gi|239803585|gb|ACS20652.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] Length = 275 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 60/233 (25%), Positives = 99/233 (42%), Gaps = 23/233 (9%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK-----GFDVDFCRALSSAIFDD 74 + +A L DIKK+G L G+ +G E D K G++VD A++ I Sbjct: 19 IAAHADQLADIKKKGELVVGV----LGTDEPATFIDPKTRQIVGYEVDLVNAIAKKIGVK 74 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 P Q + R LQ +D+++ RE + F T+ GQ I+ K Sbjct: 75 PVLKQ---IAVAARIPELQQGHVDLVAAGLTHNKEREAQID--FSLTTFVTGQKAIVKKD 129 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 GI+ V QL+G + G T E + + + F+ ++ A + + Y Sbjct: 130 SGITEVPQLAGKKVLTIRGGTQEPNIRKAVPTAEV----VTFDTSQQAFQALQQGKGVGY 185 Query: 195 TGDISAL---YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 D +AL YA KL + +++V+L +S LA I +G++ +V T Sbjct: 186 VDDEAALLRSYA-KLGPQK-AQYVVLKQNLSTEALAIGIKKGESALKAVVDDT 236 >gi|116049212|ref|YP_791985.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa UCBPP-PA14] gi|115584433|gb|ABJ10448.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa UCBPP-PA14] Length = 273 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 7/145 (4%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 A L DI + G L+C + A + GFDVD+C L+ A+ D ++I P Sbjct: 24 QADKLDDIIESGKLRCAVTLDFPPMGSRDAQNNPVGFDVDYCNDLAKAL-DVKAEIVETP 82 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVS 141 +R AL S + D++ +T TL R ++G++ I YF ++ ++ GI+S Sbjct: 83 F--PDRIPALVSGRADVIVASTSDTLERAKTIGMS---IPYFAFVKVVLTREDTGIASYE 137 Query: 142 QLSGASICVQAGTTTELTLADYFKA 166 L G + AGT L L KA Sbjct: 138 DLKGRPVGGTAGTFEALALEKDSKA 162 >gi|291518760|emb|CBK73981.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [Butyrivibrio fibrisolvens 16/4] Length = 298 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 57/223 (25%), Positives = 95/223 (42%), Gaps = 27/223 (12%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L +IK+ G + G+ + F V NG++ G+DV F + D KI Y+ A Sbjct: 55 LDEIKESGTINIGVFSDKSPFGFVDENGEYAGYDVYFAERIGE---DLGVKINYVSTEAA 111 Query: 87 ERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 R LQ+ ++DI+ N T R E+ L + + G + + S+ L Sbjct: 112 NRIEYLQTGKVDIILANFTVTEERAQEVDFALPYMNVAL----GVVSPDSAVVESLDDLG 167 Query: 145 G-ASICVQAGTTTELTLADYFKAHNMKYHPIV----FERVEEIDAAYRAHRCDAYTGDIS 199 I V +GTT E L K +P + ++ E A+ A+ D + Sbjct: 168 ADDQIIVISGTTAETYL--------TKNYPDIKLQKYDAYAEAKTAFENGTGVAWANDNT 219 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG-DT--EWYN 239 + A L N+ + V +P + + +APA+ +G DT +W N Sbjct: 220 EVIAFSLENEGYT--VGIPSLGDQDTIAPAVTKGNDTLLKWLN 260 >gi|238893281|ref|YP_002918015.1| cysteine transport system periplasmic binding component [Klebsiella pneumoniae NTUH-K2044] gi|238545597|dbj|BAH61948.1| cysteine transport system periplasmic binding component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 283 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 59/222 (26%), Positives = 90/222 (40%), Gaps = 13/222 (5%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDW-KGFDVDFCRALSSAIFDDPSKIQYL 81 A L DIK G +K F V A G+DVDF +AL+ A+ K++ + Sbjct: 36 QADQLADIKAAGVVKVATFDANPPFGSVDAKTHHIVGYDVDFAQALAKALG---VKLELV 92 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 N R LQS + D++ D T+ E + + F + GQ F++ + Sbjct: 93 ATNPANRIPLLQSGKADLIV--ADITITPERAQVIDFSTPYFVTGQQFLVPAGSP-DKLD 149 Query: 142 QLSGASICVQAGTTTELTLADYF-KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + S A I GTT E L F +A + Y I A R A T D + Sbjct: 150 EYSKARIGAVKGTTGEQALHQRFPQARVLSYDDIPLALT-----ALRNGNVQAITQDSTI 204 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 L L ++ ILPD++SK + + +G+ V+ Sbjct: 205 LAGLLAEAPDKAKFKILPDLLSKEEIGVGVKKGEPALLKAVN 246 >gi|15596457|ref|NP_249951.1| amino acid ABC transporter periplasmic binding protein [Pseudomonas aeruginosa PAO1] gi|218892766|ref|YP_002441635.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa LESB58] gi|254234386|ref|ZP_04927709.1| hypothetical protein PACG_00230 [Pseudomonas aeruginosa C3719] gi|296390361|ref|ZP_06879836.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa PAb1] gi|9947192|gb|AAG04649.1|AE004555_9 amino acid ABC transporter periplasmic binding protein [Pseudomonas aeruginosa PAO1] gi|126166317|gb|EAZ51828.1| hypothetical protein PACG_00230 [Pseudomonas aeruginosa C3719] gi|218772994|emb|CAW28806.1| probable binding protein component of ABC transporter [Pseudomonas aeruginosa LESB58] Length = 273 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 7/145 (4%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 A L DI + G L+C + A + GFDVD+C L+ A+ D ++I P Sbjct: 24 QADKLDDIIESGKLRCAVTLDFPPMGSRDAQNNPVGFDVDYCNDLAKAL-DVKAEIVETP 82 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVS 141 +R AL S + D++ +T TL R ++G++ I YF ++ ++ GI+S Sbjct: 83 F--PDRIPALVSGRADVIVASTSDTLERAKTIGMS---IPYFAFVKVVLTREDTGIASYE 137 Query: 142 QLSGASICVQAGTTTELTLADYFKA 166 L G + AGT L L KA Sbjct: 138 DLKGRPVGGTAGTFEALALEKDSKA 162 >gi|72383932|ref|YP_293286.1| extracellular solute-binding protein [Ralstonia eutropha JMP134] gi|72123275|gb|AAZ65429.1| extracellular solute-binding protein, family 3 [Ralstonia eutropha JMP134] Length = 289 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 51/232 (21%), Positives = 94/232 (40%), Gaps = 18/232 (7%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD-------P 75 +A L + G + V F+ + GF VD L+ AI DD P Sbjct: 16 HAETLEKVAATGRITVAYREAAVPFSYLLGPHKAVGFSVD----LTEAIVDDVRSRLKQP 71 Query: 76 S-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMH 132 K++Y+P+ + R L + D+ +T T +R E++ + F ++ G + Sbjct: 72 DLKVEYIPVTGQNRIPLLVNGTYDLECGSTTNTSMRGKEVAFSINF----FYAGTRLLTK 127 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 + GI+ + L+ ++ AG+T E + + +N+ I + + R Sbjct: 128 RDSGINGYADLAKKTVASTAGSTNEKVVRKHGADNNIDVQMISGKDYADALQLVENDRAS 187 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 A D L+ L+ + PS I+ D + P A + + D E+ +V T Sbjct: 188 ALALDDVLLFGLRANSRNPSSLEIVGDTLQVEPYACMVRKDDAEFKKLVDGT 239 >gi|257461155|ref|ZP_05626253.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] gi|257441529|gb|EEV16674.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] Length = 270 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 43/202 (21%), Positives = 92/202 (45%), Gaps = 12/202 (5%) Query: 12 LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI 71 L IL S A+ L +I++ G ++ G+ G +E NG ++GF+++ +++ I Sbjct: 4 LFILALFCASIFANTLDEIRQAGVIRVGVREGRPPLSE-SNNGKFEGFEIELASSIAKDI 62 Query: 72 F-DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQG 128 F D ++Q++ + A ER L++ ++D++ T R ++ L + + + G Sbjct: 63 FGDKKGEVQFVAVTAGERIPFLKNNKVDMVIGTFMITQERKKQVDFSLPYLSVNF----G 118 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF-ERVEEIDAAYR 187 + K+ + +Q+ I ++ +T Y + K+ +V+ + E A + Sbjct: 119 IVTRKEDQVKDFAQVRDMRISIEKNPNGSMT-ERYLRKE--KFSNLVYCKNTSECYAMMK 175 Query: 188 AHRCDAYTGDISALYALKLTND 209 R D Y D + A + +D Sbjct: 176 DGRADGYANDNIIVLAYAVVDD 197 >gi|194292188|ref|YP_002008095.1| glutamate/aspartate transport protein (ABC superfamily, peri_bind) high affinity periplasmic solute-binding protein [Cupriavidus taiwanensis LMG 19424] gi|193226092|emb|CAQ72039.1| glutamate/aspartate transport protein (ABC superfamily, peri_bind) high affinity periplasmic solute-binding protein [Cupriavidus taiwanensis LMG 19424] Length = 281 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 53/243 (21%), Positives = 97/243 (39%), Gaps = 8/243 (3%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC-RALSSA---IFDDPSK 77 + +L I+ G + G + F+ G G+ VD C RA +A + K Sbjct: 9 AQSPVLDKIRDAGTIVLGYRESALPFSFADDKGQPAGYAVDLCLRAAEAARQKLGLKDLK 68 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++++PL + R A+ + +D+ +L R+ + AF Y ++ GI Sbjct: 69 VRWMPLTPQNRIPAVVNGLVDLDCAPNTNSLERQKQV--AFSVSHYVSTVRMLVRADSGI 126 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 S L G ++ AG+T + + + + YH + + E + R A+ D Sbjct: 127 RSFGDLRGKTVVTSAGSTGDRHVRRFKGQYG--YHDVYAKDHGESFLLLESGRAQAFVMD 184 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 L L+ PS++VI+ +S A + + D EW +V T E+ Sbjct: 185 DVLLAGLRARAKDPSQYVIVGPALSVEQNALMLSKADPEWKRLVDQTLATTFAGPEVVAL 244 Query: 258 QKN 260 Q+ Sbjct: 245 QQR 247 >gi|261344518|ref|ZP_05972162.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Providencia rustigianii DSM 4541] gi|282567430|gb|EFB72965.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Providencia rustigianii DSM 4541] Length = 280 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 64/249 (25%), Positives = 107/249 (42%), Gaps = 17/249 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKG 58 M S L + L T+ +A L DIK+ G ++ + + GF + K G Sbjct: 1 MKARILTSALLVAGLALTANVASADKLDDIKQAGVIRISVFDSNPPFGFIDPKTK-KLAG 59 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 +D+D +A++ D K++ P N R L S ++D++ N +T+ E + + F Sbjct: 60 YDIDIAQAIAD---DLGVKLELRPTNPANRIPLLTSGKVDLIGAN--FTITDERAKQVDF 114 Query: 119 RPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + GQ FI +KG+ + ++ I GT E+TL + F N K I ++ Sbjct: 115 SIPDFATGQKFIA--RKGVLKTPEDIAPLRIGADKGTVQEVTLRERF--PNTKV--ISYD 168 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYAL--KLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + AA R A T D + L L L ++ I P ++K A A +G+T Sbjct: 169 DTPQAFAALRNGNVQAITQDDAKLVGLLGNLPEKVKADFEISPFSLTKEYQALAASKGET 228 Query: 236 EWYNIVSWT 244 V+ T Sbjct: 229 RLVESVNET 237 >gi|212711638|ref|ZP_03319766.1| hypothetical protein PROVALCAL_02713 [Providencia alcalifaciens DSM 30120] gi|212685740|gb|EEB45268.1| hypothetical protein PROVALCAL_02713 [Providencia alcalifaciens DSM 30120] Length = 279 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 51/206 (24%), Positives = 90/206 (43%), Gaps = 13/206 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKG 58 M F S L + L T+ +A L DIK+ G ++ + + GF + + G Sbjct: 1 MKARFLTSALLVAGLALTANVASADKLDDIKQAGVIRISVFDSNPPFGFIDPQTK-KLAG 59 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 +D+D +A++ D K++ P N R L S ++D++ N +T+ E + + F Sbjct: 60 YDIDIAQAIAD---DLGVKLELRPTNPANRIPLLTSGKVDLIGAN--FTITDERAKQVDF 114 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + GQ FI +K + + ++ I GT E+TL + F + + I ++ Sbjct: 115 SIPDFATGQKFI-ARKGVLKTPEDIAPLRIGADKGTVQEVTLRERFPSTKV----ISYDD 169 Query: 179 VEEIDAAYRAHRCDAYTGDISALYAL 204 + AA R A T D + L L Sbjct: 170 TPQAFAALRNGNVQAITQDDAKLVGL 195 >gi|152968872|ref|YP_001333981.1| cysteine ABC transporter periplasmic substrate binding protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206578283|ref|YP_002240191.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Klebsiella pneumoniae 342] gi|262042357|ref|ZP_06015519.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|288936935|ref|YP_003440994.1| extracellular solute-binding protein family 3 [Klebsiella variicola At-22] gi|290510009|ref|ZP_06549379.1| cysteine transport system periplasmic binding component [Klebsiella sp. 1_1_55] gi|330006799|ref|ZP_08305702.1| ABC transporter, substrate-binding protein, family 3 [Klebsiella sp. MS 92-3] gi|150953721|gb|ABR75751.1| cysteine transport protein (ABC superfamily, peri_bind) [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206567341|gb|ACI09117.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Klebsiella pneumoniae 342] gi|259040265|gb|EEW41374.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|288891644|gb|ADC59962.1| extracellular solute-binding protein family 3 [Klebsiella variicola At-22] gi|289776725|gb|EFD84723.1| cysteine transport system periplasmic binding component [Klebsiella sp. 1_1_55] gi|328535739|gb|EGF62181.1| ABC transporter, substrate-binding protein, family 3 [Klebsiella sp. MS 92-3] Length = 269 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 59/222 (26%), Positives = 90/222 (40%), Gaps = 13/222 (5%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDW-KGFDVDFCRALSSAIFDDPSKIQYL 81 A L DIK G +K F V A G+DVDF +AL+ A+ K++ + Sbjct: 22 QADQLADIKAAGVVKVATFDANPPFGSVDAKTHHIVGYDVDFAQALAKALG---VKLELV 78 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 N R LQS + D++ D T+ E + + F + GQ F++ + Sbjct: 79 ATNPANRIPLLQSGKADLIV--ADITITPERAQVIDFSTPYFVTGQQFLVPAGSP-DKLD 135 Query: 142 QLSGASICVQAGTTTELTLADYF-KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + S A I GTT E L F +A + Y I A R A T D + Sbjct: 136 EYSKARIGAVKGTTGEQALHQRFPQARVLSYDDIPLALT-----ALRNGNVQAITQDSTI 190 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 L L ++ ILPD++SK + + +G+ V+ Sbjct: 191 LAGLLAEAPDKAKFKILPDLLSKEEIGVGVKKGEPALLKAVN 232 >gi|187928559|ref|YP_001899046.1| family 3 extracellular solute-binding protein [Ralstonia pickettii 12J] gi|187725449|gb|ACD26614.1| extracellular solute-binding protein family 3 [Ralstonia pickettii 12J] Length = 297 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 54/249 (21%), Positives = 97/249 (38%), Gaps = 18/249 (7%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 S L + L + +A L + G + G V F+ + A GF VD Sbjct: 7 LASTLVVAGLTVAAQGIHAQTLEKVAAAGKITVGYREAAVPFSYLLAPNKAVGFSVD--- 63 Query: 66 ALSSAIFDD-------PS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR--EISLG 115 L+ AI DD PS ++ +P+ R L + D+ +T T R +++ Sbjct: 64 -LTQAIVDDVRARLKKPSLQVDAIPVTGTNRIPLLVNGTYDLECGSTTNTSARGKDVAFS 122 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F ++ G + + GI + L+G ++ AG+T E L + HN+ I Sbjct: 123 INF----FYAGTRLLTKRDSGIKNYPDLAGKTVASTAGSTNEKVLKKFAVEHNIDVQIIS 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + R A D LY L+ + P+ ++ + + P A + + D Sbjct: 179 GKDYADALKLVETGRATALALDDVLLYGLRANSANPAALEVVAETLQVEPYACMVRKDDP 238 Query: 236 EWYNIVSWT 244 + +V T Sbjct: 239 AFKRLVDAT 247 >gi|87303445|ref|ZP_01086233.1| extracellular solute-binding protein, family 3 [Synechococcus sp. WH 5701] gi|87282093|gb|EAQ74055.1| extracellular solute-binding protein, family 3 [Synechococcus sp. WH 5701] Length = 299 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 47/222 (21%), Positives = 96/222 (43%), Gaps = 11/222 (4%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD---PSKIQY 80 S+L + G L G + FA G G+ +D + I P K++ Sbjct: 25 GSLLQSVAASGVLVGGTSRDAFPFAYQNEEGQLVGYSIDMMNLIREEIERQTGRPIKLKL 84 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY-FDGQGFIMHKKKGISS 139 +PL+ +R +L+S ++++ + +T R+ + + ++Y G ++ + G+SS Sbjct: 85 VPLDTDQRLSSLESGAVNLVCDASSFTWSRDEKVDFS---VSYGITGTQLLVPRGSGLSS 141 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L+G + V TT+ L +A A ++ ++ + +E A + R DA+ D Sbjct: 142 PESLAGKRVGVLPRTTSVLAVASRQPAASL----VLLKDRQEGYEALQQGRIDAFADDGM 197 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 LYA + + D S+ +A + Q ++ + +V Sbjct: 198 LLYAWLQRQGGQAPFKVSADTYSREGIACMVPQNNSSFQRVV 239 >gi|218894181|ref|YP_002443050.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa LESB58] gi|254238211|ref|ZP_04931534.1| hypothetical protein PACG_04337 [Pseudomonas aeruginosa C3719] gi|126170142|gb|EAZ55653.1| hypothetical protein PACG_04337 [Pseudomonas aeruginosa C3719] gi|218774409|emb|CAW30226.1| probable binding protein component of ABC transporter [Pseudomonas aeruginosa LESB58] Length = 299 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 53/246 (21%), Positives = 106/246 (43%), Gaps = 8/246 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFC----RALSSAIFDDPSKI 78 + L + G + G V F+ + N G G+ V+ L S + K+ Sbjct: 26 SGTLKKVADNGTITLGYRDASVPFSYLGDNSGQPMGYSVELADKVVERLKSTLGKPELKV 85 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 +Y + ++ R +Q+ +D+ +T T R+ + ++ I Y GQ + K GI+ Sbjct: 86 KYNLVTSQTRIPLVQNGTVDLECGSTGVTAERQKQVAFSYGFI-YVKGQ-LLTRKDSGIA 143 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 L G ++ AGTT E L +Y H + + + + E ++ R A+ D Sbjct: 144 HFDDLKGKNVVTTAGTTNERYLKNYNAEHKLGMNVVSAKDHGEAFQMLQSGRAVAFYMDD 203 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL-GIT 257 + LY + +P + V++ + S+ + + + D ++ +V+ T + + E+ GI Sbjct: 204 ALLYGERAKARQPHDWVVVGEPQSREIYSCMVRKDDPQFLALVNETLAGLYRSGEIQGIY 263 Query: 258 QKNINQ 263 Q+ Q Sbjct: 264 QRWFQQ 269 >gi|53719422|ref|YP_108408.1| putative amino acid transport system, exported protein [Burkholderia pseudomallei K96243] gi|76810718|ref|YP_333446.1| extracellular solute-binding protein [Burkholderia pseudomallei 1710b] gi|121599839|ref|YP_992996.1| extracellular solute-binding protein [Burkholderia mallei SAVP1] gi|124384138|ref|YP_001026328.1| polar amino acid ABC uptake transporter substrate binding protein [Burkholderia mallei NCTC 10229] gi|126441076|ref|YP_001058918.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 668] gi|126448524|ref|YP_001080398.1| extracellular solute-binding protein [Burkholderia mallei NCTC 10247] gi|126454167|ref|YP_001066160.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 1106a] gi|134282189|ref|ZP_01768894.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 305] gi|167719672|ref|ZP_02402908.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei DM98] gi|167738660|ref|ZP_02411434.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 14] gi|167815884|ref|ZP_02447564.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 91] gi|167845801|ref|ZP_02471309.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei B7210] gi|167894372|ref|ZP_02481774.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 7894] gi|167902774|ref|ZP_02489979.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei NCTC 13177] gi|167911019|ref|ZP_02498110.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 112] gi|167919034|ref|ZP_02506125.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei BCC215] gi|217421274|ref|ZP_03452778.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 576] gi|237812174|ref|YP_002896625.1| polar amino acid ABC uptake transporter substrate binding protein [Burkholderia pseudomallei MSHR346] gi|242315405|ref|ZP_04814421.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 1106b] gi|254178648|ref|ZP_04885303.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia mallei ATCC 10399] gi|254179866|ref|ZP_04886465.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 1655] gi|254188730|ref|ZP_04895241.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei Pasteur 52237] gi|254197737|ref|ZP_04904159.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei S13] gi|254258483|ref|ZP_04949537.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 1710a] gi|254297706|ref|ZP_04965159.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 406e] gi|254358534|ref|ZP_04974807.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia mallei 2002721280] gi|52209836|emb|CAH35808.1| putative amino acid transport system, exported protein [Burkholderia pseudomallei K96243] gi|76580171|gb|ABA49646.1| extracellular solute-binding protein [Burkholderia pseudomallei 1710b] gi|121228649|gb|ABM51167.1| extracellular solute-binding protein [Burkholderia mallei SAVP1] gi|124292158|gb|ABN01427.1| polar amino acid ABC uptake transporter substrate binding protein [Burkholderia mallei NCTC 10229] gi|126220569|gb|ABN84075.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 668] gi|126227809|gb|ABN91349.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 1106a] gi|126241394|gb|ABO04487.1| extracellular solute-binding protein [Burkholderia mallei NCTC 10247] gi|134246227|gb|EBA46316.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 305] gi|148027661|gb|EDK85682.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia mallei 2002721280] gi|157807287|gb|EDO84457.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 406e] gi|157936409|gb|EDO92079.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei Pasteur 52237] gi|160699687|gb|EDP89657.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia mallei ATCC 10399] gi|169654478|gb|EDS87171.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei S13] gi|184210406|gb|EDU07449.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 1655] gi|217395016|gb|EEC35034.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 576] gi|237505304|gb|ACQ97622.1| polar amino acid ABC uptake transporter substrate binding protein [Burkholderia pseudomallei MSHR346] gi|242138644|gb|EES25046.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 1106b] gi|254217172|gb|EET06556.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 1710a] Length = 271 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 55/183 (30%), Positives = 82/183 (44%), Gaps = 19/183 (10%) Query: 27 LGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 L DI+K G L+ + GF + + N G DVD+ +AL+ + K++ P N Sbjct: 27 LDDIRKAGVLRVATFDSNPPFGFVDPRTN-RIVGLDVDYAQALADRLG---VKLKLQPTN 82 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 R L S ++D++ N +T+ E + + F + GQ F + KK + S QL+ Sbjct: 83 PANRIPFLTSGKVDLVLAN--FTITDERAKQVDFSVPYFASGQQF-LAKKGVLKSADQLN 139 Query: 145 GASICVQAGTTTELTLAD-YFKAHNMKYH--PIVFERVEEIDAAYRAHRCDAYTGDISAL 201 I GTT E+TL + Y +A + Y P F AA RA A T D L Sbjct: 140 RLRIGADKGTTNEVTLREKYPQATIVAYDDTPFAF-------AALRAGNVQAITQDGPKL 192 Query: 202 YAL 204 L Sbjct: 193 IGL 195 >gi|296391932|ref|ZP_06881407.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa PAb1] gi|313110121|ref|ZP_07796023.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa 39016] gi|310882525|gb|EFQ41119.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa 39016] Length = 299 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 53/246 (21%), Positives = 106/246 (43%), Gaps = 8/246 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFC----RALSSAIFDDPSKI 78 + L + G + G V F+ + N G G+ V+ L S + K+ Sbjct: 26 SGTLKKVADNGTITLGYRDASVPFSYLGDNSGQPMGYSVELAGKVVERLKSTLGKPELKV 85 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 +Y + ++ R +Q+ +D+ +T T R+ + ++ I Y GQ + K GI+ Sbjct: 86 KYNLVTSQTRIPLVQNGTVDLECGSTGVTAERQKQVAFSYGFI-YVKGQ-LLTRKDSGIA 143 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 L G ++ AGTT E L +Y H + + + + E ++ R A+ D Sbjct: 144 HFDDLKGKNVVTTAGTTNERYLKNYNAEHKLGMNVVSAKDHGEAFQMLQSGRAVAFYMDD 203 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL-GIT 257 + LY + +P + V++ + S+ + + + D ++ +V+ T + + E+ GI Sbjct: 204 ALLYGERAKARQPHDWVVVGEPQSREIYSCMVRKDDPQFLALVNETLAGLYRSGEIQGIY 263 Query: 258 QKNINQ 263 Q+ Q Sbjct: 264 QRWFQQ 269 >gi|107100709|ref|ZP_01364627.1| hypothetical protein PaerPA_01001736 [Pseudomonas aeruginosa PACS2] Length = 273 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 42/139 (30%), Positives = 66/139 (47%), Gaps = 7/139 (5%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 A L DI + G L+C + A + GFDVD+C L+ A+ D ++I P Sbjct: 24 QADKLDDIIESGKLRCAVTLDFPPMGSRDAQNNPVGFDVDYCNDLAKAL-DVKAEIVETP 82 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVS 141 +R AL S + D++ +T TL R ++G++ I YF ++ ++ GI+S Sbjct: 83 F--PDRIPALVSGRADVIVASTSDTLERAKTIGMS---IPYFAFVKVVLTREDTGIASYE 137 Query: 142 QLSGASICVQAGTTTELTL 160 L G + AGT L L Sbjct: 138 DLKGRPVGGTAGTFEALAL 156 >gi|302534451|ref|ZP_07286793.1| sugar binding protein [Streptomyces sp. C] gi|302443346|gb|EFL15162.1| sugar binding protein [Streptomyces sp. C] Length = 336 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 9/135 (6%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 I+K G L G++ + +G GFD+D +A++ I + + Y + +R Sbjct: 91 IRKAGKLVAGVDQNSFKWGYRNPDGHLDGFDIDLVKAIAKDILGNEDLVIYRAIPTSQRV 150 Query: 90 LALQSKQIDILSRNT--DWTLLREISLGLAFRPITYFD-GQGFIMHKKKGISSV-SQLSG 145 ALQ ++DI+ R + L +++ A YF+ GQ + K I+ + L G Sbjct: 151 PALQEGRVDIVVRTMTINCKRLEDVAFSTA-----YFEAGQQVLAPKGSPITGYDASLKG 205 Query: 146 ASICVQAGTTTELTL 160 IC AG+T E L Sbjct: 206 RRICTAAGSTAEAAL 220 >gi|262068036|ref|ZP_06027648.1| CjaA protein [Fusobacterium periodonticum ATCC 33693] gi|291378258|gb|EFE85776.1| CjaA protein [Fusobacterium periodonticum ATCC 33693] Length = 293 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 57/225 (25%), Positives = 99/225 (44%), Gaps = 26/225 (11%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 A + +IK G ++ G+ T F + NG +G+DV F L+ D ++Y+ L Sbjct: 45 ARTVQEIKDSGVIRIGVFTDKAPFGYIDENGKNQGYDVYFTDRLAK---DLGVNVEYISL 101 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 + R ++ + DI++ N T R ++ L + ++ G + I SV Sbjct: 102 DPASRVEYAETGKADIVAANFTVTPERAEKVDFSLPYMKVSL----GVVSPDGAVIKSVE 157 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIV-FERVEEIDAAYRA---HRCDAYTGD 197 +L ++ V GTT E YF K HP V ++ + AY A R DA++ D Sbjct: 158 ELKDKTLIVSKGTTAEY----YFS----KNHPEVKLQKYDSYADAYNALLDGRGDAFSTD 209 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT---EWYN 239 + + A +N P V + + +A A+ +G+T +W N Sbjct: 210 NTEVLAWAKSN--PGFTVGIESLGDVDTIAVAVQKGNTDLLDWIN 252 >gi|290963270|ref|YP_003494452.1| glutamine-binding protein precursor [Streptomyces scabiei 87.22] gi|260652796|emb|CBG75929.1| putative glutamine-binding protein precursor [Streptomyces scabiei 87.22] Length = 292 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 48/216 (22%), Positives = 93/216 (43%), Gaps = 12/216 (5%) Query: 23 NASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 S + + +RG GI + L G+ E + G GFD + R ++ + I++ Sbjct: 33 EGSTMARVAERGVFTVGIKFDHPLFGYKE-PSTGRITGFDAEIARMVAKDLTGSERNIRF 91 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISS 139 + + R L+ +DI+ +++ E + F Y+ Q ++ ++GI Sbjct: 92 IETMPRNREDFLRRGVVDIVV--ATYSISEERRKLVDFTDPYYYSRQDVLVRSDERGIRD 149 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 ++ L+G +C AG+T+ A + + ++ + E AA R DA + D S Sbjct: 150 LADLAGRDVCTAAGSTS----AQRLRGEVSRARLVIVDTYSECMAALVDGRIDAISTDES 205 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 L L L + +P ++ + P A + +GDT Sbjct: 206 IL--LGLMSRQPDTVRLVGKPFGREPYAIGVRRGDT 239 >gi|268319108|ref|YP_003292764.1| amino acid ABC transporter solute-binding component [Lactobacillus johnsonii FI9785] gi|262397483|emb|CAX66497.1| amino acid ABC transporter solute-binding component [Lactobacillus johnsonii FI9785] Length = 273 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 53/241 (21%), Positives = 100/241 (41%), Gaps = 18/241 (7%) Query: 10 LCLIILFFTSFSTNA------SILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDV 61 L I+ F+ F +A ++ ++KK + G+ +T L G +K G +GF+V Sbjct: 8 FSLFIVLFSVFLLSACQKNTRNVYQEVKKSNEITWGVKADTRLFGLMSIKT-GKIEGFEV 66 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D AL+ I +K ++ AK + L+++ ID + T+ E + F Sbjct: 67 DLANALTKEILGKNAKANFVQTTAKTKIPLLKNENIDAVL--AAMTITPERKKQIDFSDP 124 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 ++ GQ ++ I +V L+G + GTT D K K + ++ + Sbjct: 125 YFYAGQSLLVKDDSSIKNVRDLNGKTALAVKGTTA----VDNVKKFAPKAKVLEYDDYGQ 180 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A +A + A T D L + N + ++ + P A+ +G T+ N + Sbjct: 181 AFTALKAGQGQAMTTDNGLLAGIATEN---KGYKLVGGTYTNEPYGIAVNKGQTQMRNAI 237 Query: 242 S 242 + Sbjct: 238 N 238 >gi|260463006|ref|ZP_05811209.1| extracellular solute-binding protein family 3 [Mesorhizobium opportunistum WSM2075] gi|259031127|gb|EEW32400.1| extracellular solute-binding protein family 3 [Mesorhizobium opportunistum WSM2075] Length = 262 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 59/228 (25%), Positives = 92/228 (40%), Gaps = 20/228 (8%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F++ L L L + + +A L DI KRG L+ + T F+ V ANG+ G V+ Sbjct: 6 LFIAGLALAGL---TTAASAGALDDITKRGELRVAVQTQGPPFSLVGANGERTGSSVELA 62 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 ++ + KI +L + AL S + D+L + TL R + + P Y Sbjct: 63 ELMAKEM---GVKITFLDFDWDGLIPALLSGKADLLVADMTPTLARGMKVAFT-TPYMYT 118 Query: 125 DGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH----PIVFERV 179 F K + + G I V G T E F ++K + P++ + V Sbjct: 119 GSTVFTKADSKFKTTEDCKAKGTKIAVLLGATGEKEAKAAFPDADIKSYKGGGPLLLDAV 178 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 A + A G +A A T I+PD++SK PLA Sbjct: 179 NNGQADCGVNDVSAVKGQSTAYPAGTFT--------IMPDLLSKEPLA 218 >gi|107104181|ref|ZP_01368099.1| hypothetical protein PaerPA_01005254 [Pseudomonas aeruginosa PACS2] gi|254244037|ref|ZP_04937359.1| hypothetical protein PA2G_04870 [Pseudomonas aeruginosa 2192] gi|126197415|gb|EAZ61478.1| hypothetical protein PA2G_04870 [Pseudomonas aeruginosa 2192] Length = 299 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 53/246 (21%), Positives = 106/246 (43%), Gaps = 8/246 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFC----RALSSAIFDDPSKI 78 + L + G + G V F+ + N G G+ V+ L S + K+ Sbjct: 26 SGTLKKVADNGTITLGYRDASVPFSYLGDNSGQPMGYSVELADKVVERLKSTLGKPELKV 85 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 +Y + ++ R +Q+ +D+ +T T R+ + ++ I Y GQ + K GI+ Sbjct: 86 KYNLVTSQTRIPLVQNGTVDLECGSTGVTAERQKQVAFSYGFI-YVKGQ-LLTRKDSGIA 143 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 L G ++ AGTT E L +Y H + + + + E ++ R A+ D Sbjct: 144 HFDDLKGKNVVTTAGTTNERYLKNYNAEHKLGMNVVSAKDHGEAFQMLQSGRAVAFYMDD 203 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL-GIT 257 + LY + +P + V++ + S+ + + + D ++ +V+ T + + E+ GI Sbjct: 204 ALLYGERAKARQPHDWVVVGEPQSREIYSCMVRKDDPQFLALVNETLAGLYRSGEIQGIY 263 Query: 258 QKNINQ 263 Q+ Q Sbjct: 264 QRWFQQ 269 >gi|321312269|ref|YP_004204556.1| glutamine ABC transporter glutamine-binding lipoprotein [Bacillus subtilis BSn5] gi|320018543|gb|ADV93529.1| glutamine ABC transporter (glutamine-binding lipoprotein) [Bacillus subtilis BSn5] Length = 273 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 38/158 (24%), Positives = 72/158 (45%), Gaps = 7/158 (4%) Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 ++G+ +GFD+D + ++ I D K ++ + +K R LQ+ ID + T+ E Sbjct: 65 SSGEIEGFDIDIAKQIAKDILGDEKKAEFKEVTSKTRIPMLQNGDIDAIVAT--MTITDE 122 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMK 170 + F + + GQ ++ K I SV L G+ + G+T+ + + ++ Sbjct: 123 RKKEVDFSDVYFEAGQSLLVKKGSKIKSVEDLDKGSKVLAVKGSTSSQNIREKAPEASV- 181 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 + FE E A ++ + DA T D + LY + N Sbjct: 182 ---LEFENYAEAFTALKSGQGDALTTDNAILYGMADEN 216 >gi|172037363|ref|YP_001803864.1| solute-binding family protein 3 [Cyanothece sp. ATCC 51142] gi|171698817|gb|ACB51798.1| putative extracellular solute-binding protein, family 3 [Cyanothece sp. ATCC 51142] Length = 276 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 59/248 (23%), Positives = 96/248 (38%), Gaps = 19/248 (7%) Query: 9 ILCLIILFFTS----FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 IL LI L F S F+ ++L IK+ G L G+ + F V G W G+ VD Sbjct: 7 ILVLITLIFCSIFPSFALAETVLEKIKRTGELNAGVRKDAIPFGYVNQRGKWTGYSVDLI 66 Query: 65 RALSSAIFDDPSKIQYLPLNAKE-----RFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 + + D + Q + LN +E RF +Q +DI+ T T R S + F Sbjct: 67 HLIHKRLEKDLN--QSIKLNLREATIDSRFRIVQRGDVDIMCGATTITQTR--SKRVDFS 122 Query: 120 PITYFDGQGFI--MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + G F+ + L+ I GTTT+ + + + N K + Sbjct: 123 VPFFMTGAQFLVKLEDAPNFDYNGSLNNIPIAFLPGTTTQEIIPQIYPSANWKN---IKN 179 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP-DIISKSPLAPAIIQGDTE 236 R E + R + I L + + + V+LP I++ + Q + + Sbjct: 180 REEGVRKLKRDEVKAVVSDGILLLGEIVQQGNNIEDFVLLPSQPITRELYGCILPQKNPQ 239 Query: 237 WYNIVSWT 244 W V+ T Sbjct: 240 WKQFVNVT 247 >gi|197117373|ref|YP_002137800.1| amino acid ABC transporter amino acid-binding protein [Geobacter bemidjiensis Bem] gi|197086733|gb|ACH38004.1| amino acid ABC transporter, amino acid-binding protein [Geobacter bemidjiensis Bem] Length = 264 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 64/273 (23%), Positives = 100/273 (36%), Gaps = 26/273 (9%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 +S L ++ L ++F+ + S +KK G L G++ G+ GFD+D Sbjct: 7 ILSSLLVLTLAVSAFAADGS-FKRVKKEGTLTIGLDDAFPPMGYRNDKGELVGFDIDAAE 65 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 + + KI++ P AL SK+ D + T+ E +AF D Sbjct: 66 EVGKRL---GIKIKWQPTAWDGVMHALNSKKFDCIWNGM--TITDERKKEVAFTKPYKMD 120 Query: 126 GQ-GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 GQ + +K ++ L GA + VQ G++ +K P V E + Sbjct: 121 GQVAVVRFGEKKFKKLADLKGAKVGVQKGSSA---------VEAVKKLPAAPAEVREYED 171 Query: 185 AYRA------HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +A R D I RP + I+P I+K P A + D E Sbjct: 172 NPKALLDLESKRLDTVV--IDDATGRDFIAKRPGKFQIIPGNITKEPFGVAFRKDDVELR 229 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 V T MV + K +D TNP Sbjct: 230 EAVQKTLDKMVKDGTMAKISK--KWFGEDITNP 260 >gi|15600275|ref|NP_253769.1| binding protein component of ABC transporter [Pseudomonas aeruginosa PAO1] gi|116053228|ref|YP_793551.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa UCBPP-PA14] gi|9951376|gb|AAG08467.1|AE004921_4 probable binding protein component of ABC transporter [Pseudomonas aeruginosa PAO1] gi|115588449|gb|ABJ14464.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa UCBPP-PA14] Length = 299 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 58/270 (21%), Positives = 113/270 (41%), Gaps = 11/270 (4%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKK---RGFLKCGINTGLVGFAEVKAN-GDWKG 58 K S L + + + G +KK G + G V F+ + N G G Sbjct: 2 KTLVSSTFALSLSLAIGAAQAEELSGTLKKVADNGTITLGYRDASVPFSYLGDNSGQPMG 61 Query: 59 FDVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + V+ L S + K++Y + ++ R +Q+ +D+ +T T R+ + Sbjct: 62 YSVELAGKVVERLKSTLGKPELKVKYNLVTSQTRIPLVQNGTVDLECGSTGVTAERQKQV 121 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 ++ I Y GQ + K GI+ L G ++ AGTT E L +Y H + + + Sbjct: 122 AFSYGFI-YVKGQ-LLTRKDSGIAHFDDLKGKNVVTTAGTTNERYLKNYNAEHKLGMNVV 179 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + E ++ R A+ D + LY + +P + V++ + S+ + + + D Sbjct: 180 SAKDHGEAFQMLQSGRAVAFYMDDALLYGERAKARQPHDWVVVGEPQSREIYSCMVRKDD 239 Query: 235 TEWYNIVSWTHYAMVTAEEL-GITQKNINQ 263 ++ +V+ T + + E+ GI Q+ Q Sbjct: 240 PQFLALVNETLAGLYRSGEIQGIYQRWFQQ 269 >gi|186471953|ref|YP_001863271.1| extracellular solute-binding protein [Burkholderia phymatum STM815] gi|184198262|gb|ACC76225.1| extracellular solute-binding protein family 3 [Burkholderia phymatum STM815] Length = 262 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 59/233 (25%), Positives = 95/233 (40%), Gaps = 13/233 (5%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAI 71 ++ S + A L DIKK G L+ + GF + K+N G DVD+ RA+++ + Sbjct: 3 LMLAISSAVRADRLDDIKKAGVLRVATFDSNPPFGFVDPKSN-QIVGLDVDYARAVANKL 61 Query: 72 FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131 K++ P N R L+S ++D++ N +T+ E + F + G FI Sbjct: 62 G---VKLEIQPTNPANRIAFLKSGKVDLVFAN--FTITDERKKEVDFSTPYFASGTQFI- 115 Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191 KK + + QL+ I GTT E + F + + ++ AA R Sbjct: 116 AKKGVLKTPQQLNSLRIGADKGTTNEQQVRAQFPGATI----VAYDDTPFAFAALRTGNV 171 Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 T D L AL + I IS + +G+T N+V T Sbjct: 172 QVITQDGPKLVALLANVPDKGSYEISAFTISNDYEGVGVPKGETRLLNLVDDT 224 >gi|254470766|ref|ZP_05084169.1| extracellular solute-binding protein, family 3 [Pseudovibrio sp. JE062] gi|211959908|gb|EEA95105.1| extracellular solute-binding protein, family 3 [Pseudovibrio sp. JE062] Length = 275 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 36/158 (22%), Positives = 72/158 (45%), Gaps = 5/158 (3%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 +++ ++ ++ A + DI +G L+CG+ ++ + GFDV +C+ + Sbjct: 10 ALVGAALMAASTAPAQADEIDDIIGKGTLRCGVMLDFPPAGFRNSSNEPDGFDVQYCKDM 69 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + A+ + + + + ER AL SK++D++ + TL R ++ + Y + Sbjct: 70 AKAL---GVEAEVVETPSPERVPALVSKRVDVMIASASNTLERAKTVAFTMPYVVYTN-- 124 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165 I K I S L G S+ GTT E ++F+ Sbjct: 125 VVITQKDSDIESFEDLKGRSVGNVVGTTPEQFFLEHFE 162 >gi|107101631|ref|ZP_01365549.1| hypothetical protein PaerPA_01002675 [Pseudomonas aeruginosa PACS2] Length = 268 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 63/253 (24%), Positives = 108/253 (42%), Gaps = 18/253 (7%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRAL 67 + + L S A L DI+K G L+ + GF + K+ +G DVD+ +AL Sbjct: 7 ITALALALISGLAQADRLEDIRKAGVLRVASFDSNPPFGFVDAKSK-QIEGLDVDYAKAL 65 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF-DG 126 + + ++Q LP N R L + ++D++ N +T+ E + + F I YF G Sbjct: 66 ADKLG---VRLQVLPTNPANRIPLLTANKVDLVLAN--FTITPERAQQVDFS-IPYFSSG 119 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 Q FI+ KK ++S L+ + V GT E L + F + I ++ A Sbjct: 120 QQFIV-KKGTLTSPEVLNKWRVGVDKGTVNEGVLREKFPGAKV----IAYDDTPFAFTAL 174 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 R + A T D L L ++ + P IS + I +G+ ++ + Sbjct: 175 RNGQVQAITQDGPKLIGLLANVPDRDKYEVPPFTISNDLIGVGIPKGEK---SLTEFVDK 231 Query: 247 AMVTAEELGITQK 259 ++ E+ G QK Sbjct: 232 SLRELEQDGQAQK 244 >gi|293572581|ref|ZP_06683555.1| glutamine-binding protein [Enterococcus faecium E980] gi|291607364|gb|EFF36712.1| glutamine-binding protein [Enterococcus faecium E980] Length = 271 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 57/234 (24%), Positives = 102/234 (43%), Gaps = 23/234 (9%) Query: 23 NASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 N IL K + G+ +T L G ++++ +GFDVD +A++ I + K ++ Sbjct: 30 NEDILERSKSTNEISWGVKYDTRLFGMMDIESR-TVQGFDVDIAKAITEKILGENGKAEF 88 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD-GQGFIMHKKKGISS 139 + + +K R L++ ID + T+ E + F + YFD GQ ++ K I S Sbjct: 89 VEVTSKTRIPLLKNGNIDAII--ATMTITDERKKQVDFSDV-YFDAGQALLVKKGSQIKS 145 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHP-----IVFERVEEIDAAYRAHRCDAY 194 V L+ +TT L + A N++ H + E E A ++ + DA Sbjct: 146 VDDLN--------ASTTVLAVKGSTSAANIRQHAPDANILELENYAEAFTALQSGQGDAM 197 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 T D + L L + ++ P E+ ++ + P AI +G + V+ M Sbjct: 198 TTDNAIL--LGIADENP-EYELVGGTFTNEPYGIAINKGQENFLKAVNQALEEM 248 >gi|253701872|ref|YP_003023061.1| extracellular solute-binding protein family 3 [Geobacter sp. M21] gi|251776722|gb|ACT19303.1| extracellular solute-binding protein family 3 [Geobacter sp. M21] Length = 264 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 65/273 (23%), Positives = 101/273 (36%), Gaps = 26/273 (9%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 +S L ++ L ++F+ + S +KK G L G++ G+ GFD+D Sbjct: 7 ILSSLLVLTLAVSAFAADGS-FKRVKKEGTLTIGLDDAFPPMGYRNDKGELIGFDIDAAE 65 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 + + KI++ P AL SK+ D + T+ E +AF D Sbjct: 66 EVGKRL---GIKIKWQPTAWDGVMHALNSKKFDCIWNGM--TITDERKKEVAFTKPYKMD 120 Query: 126 GQ-GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 GQ + +K ++ L GA + VQ G++ +K P V V E + Sbjct: 121 GQVAVVRFGEKKFKKLADLKGARVGVQKGSSA---------VEAVKKLPAVPAGVREYED 171 Query: 185 AYRA------HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +A R D I RP + I+P I+K P A + D E Sbjct: 172 NPKALLDLESKRLDTVV--IDDATGRDFIAKRPGKFQIIPGNITKEPFGVAFRKEDVELR 229 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 V T MV + K +D TNP Sbjct: 230 EAVQKTLDKMVKDGTMAKISK--KWFGEDITNP 260 >gi|296103000|ref|YP_003613146.1| allantoate transport periplasmic binding protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057459|gb|ADF62197.1| allantoate transport periplasmic binding protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 268 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 38/149 (25%), Positives = 67/149 (44%), Gaps = 9/149 (6%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 + T+ S A L DI+KRG ++ + F V + +G+D+D R L+ + Sbjct: 20 VCLLTNLSAKADQLQDIEKRGTIRIAVPQDFPPFGSVGTDLQPQGYDIDMARYLAKQM-- 77 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE--ISLGLAFRPITYFDGQGFIM 131 K+Q +P+ + R LQ+ ++D++ + RE I A+ P +F G Sbjct: 78 -KVKLQLVPVTSANRVPYLQTDKVDLVISSLGKNAEREKVIDFSRAYAP--FF--LGVFG 132 Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTL 160 K + + LSG +I V G ++ L Sbjct: 133 PKGAELKDAAALSGKTIGVTRGAVEDMVL 161 >gi|163789690|ref|ZP_02184127.1| glutamine ABC transporter (glutamine-binding protein) [Carnobacterium sp. AT7] gi|159874912|gb|EDP68979.1| glutamine ABC transporter (glutamine-binding protein) [Carnobacterium sp. AT7] Length = 266 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 44/174 (25%), Positives = 82/174 (47%), Gaps = 12/174 (6%) Query: 40 INTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99 ++T L G ++K+ G+ +GFD+D +A++ I D + +++ + +K R L++ ID Sbjct: 49 VDTNLFGLYDIKS-GEIRGFDIDIAKAITEEITGDEANAEFVEVTSKTRIPLLKNGNIDA 107 Query: 100 LSRNTDWTLLREISLGLAFRPITYFD-GQGFIMHKKKGISSVSQLSG-ASICVQAGTTTE 157 + T+ E + F I YFD GQ ++ I S+ LS ++ G+T+ Sbjct: 108 IIAT--MTITEERKEQVNFSDI-YFDAGQALLVPNDSSIQSLEDLSADTTVLAVKGSTSA 164 Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 + + N+ + E E A ++ + DA T D + L L + D P Sbjct: 165 QNIRELSPDTNV----LELENYSEAFTALQSGQGDAVTTDNAIL--LGIIADNP 212 >gi|257887550|ref|ZP_05667203.1| extracellular solute-binding protein [Enterococcus faecium 1,141,733] gi|257898672|ref|ZP_05678325.1| extracellular solute-binding protein [Enterococcus faecium Com15] gi|257823604|gb|EEV50536.1| extracellular solute-binding protein [Enterococcus faecium 1,141,733] gi|257836584|gb|EEV61658.1| extracellular solute-binding protein [Enterococcus faecium Com15] Length = 271 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 52/214 (24%), Positives = 95/214 (44%), Gaps = 21/214 (9%) Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 +T L G ++++ +GFDVD +A++ I + K +++ + +K R L++ ID + Sbjct: 50 DTRLFGMMDIESR-TVQGFDVDIAKAITEKILGENGKAEFVEVTSKTRIPLLKNGNIDAI 108 Query: 101 SRNTDWTLLREISLGLAFRPITYFD-GQGFIMHKKKGISSVSQLSGASICVQAGTTTELT 159 T+ E + F + YFD GQ ++ K I SV L+ +TT L Sbjct: 109 I--ATMTITDERKKQVDFSDV-YFDAGQALLVKKGSQIKSVDDLN--------ASTTVLA 157 Query: 160 LADYFKAHNMKYHP-----IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 + A N++ H + E E A ++ + DA T D + L L + ++ P E+ Sbjct: 158 VKGSTSAANIRQHAPDANILELENYAEAFTALQSGQGDAMTTDNAIL--LGIADENP-EY 214 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 ++ + P AI +G + V+ M Sbjct: 215 ELVGGTFTNEPYGIAINKGQENFLKAVNQALEEM 248 >gi|304395377|ref|ZP_07377260.1| extracellular solute-binding protein family 3 [Pantoea sp. aB] gi|304356671|gb|EFM21035.1| extracellular solute-binding protein family 3 [Pantoea sp. aB] Length = 261 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 40/144 (27%), Positives = 68/144 (47%), Gaps = 9/144 (6%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 S A L DI+KRG ++ + F V + +G+D+D + L+ + K+Q Sbjct: 20 SALADQLQDIQKRGVIRVAVPQDFPPFGSVGTDLQPQGYDIDTAKYLAKQM---KLKLQL 76 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLRE--ISLGLAFRPITYFDGQGFIMHKKKGIS 138 +P+++ R LQ+ ++D++ + RE I A+ P +F G K I Sbjct: 77 VPVSSANRVPYLQTDKVDLVISSMGKNAEREKVIDFTRAYAP--FF--LGVFGPKGDEIK 132 Query: 139 SVSQLSGASICVQAGTTTELTLAD 162 + S LSG SI V G ++ L+D Sbjct: 133 AASALSGKSIGVTRGAVEDMVLSD 156 >gi|152984549|ref|YP_001348446.1| putative ABC transporter binding protein subunit [Pseudomonas aeruginosa PA7] gi|150959707|gb|ABR81732.1| probable binding protein component of ABC transporter [Pseudomonas aeruginosa PA7] Length = 268 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 63/253 (24%), Positives = 107/253 (42%), Gaps = 18/253 (7%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRAL 67 + + L S A L DI+K G L+ + GF + K+ +G DVD+ +AL Sbjct: 7 ITALALALVSGLAQADRLEDIRKAGVLRVASFDSNPPFGFVDAKSK-QIEGLDVDYAKAL 65 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF-DG 126 + + ++Q LP N R L + ++D++ N +T+ E + + F I YF G Sbjct: 66 ADKLG---VRLQVLPTNPANRIPLLTANKVDLVLAN--FTITPERAQQVDFS-IPYFSSG 119 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 Q FI+ KK ++S L+ + V GT E L + F + I ++ A Sbjct: 120 QQFIV-KKGTLTSPEVLNKWRVGVDKGTVNEGVLREKFPGAKV----IAYDDTPFAFTAL 174 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 R + A T D L L ++ + P IS + I +G+ + + Sbjct: 175 RNGQVQAITQDGPKLIGLLANVPDRDKYEVPPFTISNDLIGVGIPKGEKA---LTEFVDK 231 Query: 247 AMVTAEELGITQK 259 ++ E+ G QK Sbjct: 232 SLRELEQDGQAQK 244 >gi|308185786|ref|YP_003929917.1| ABC transport system, periplasmic protein precursor [Pantoea vagans C9-1] gi|308056296|gb|ADO08468.1| putative ABC transport system, periplasmic protein precursor [Pantoea vagans C9-1] Length = 261 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 9/162 (5%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K +++ +L + S A L +I+KRG ++ + F V + +G+D+D Sbjct: 2 KKVLMAVATAALLMAQTGSALADQLQNIQKRGVIRVAVPQDFPPFGSVGTDLQPQGYDID 61 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE--ISLGLAFRP 120 + L+ + K+Q +P+++ R LQ+ ++D++ + RE I A+ P Sbjct: 62 TAKYLAKQM---KLKLQLVPVSSANRVPYLQTDKVDLVISSMGKNAEREKVIDFTRAYAP 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162 +F G K I + S LSG SI V G ++ L++ Sbjct: 119 --FF--LGVFGPKGDEIKAASALSGKSIGVTRGAVEDMVLSE 156 >gi|300692873|ref|YP_003753868.1| amino-acid ABC transporter binding protein ybeJ [Ralstonia solanacearum PSI07] gi|299079933|emb|CBJ52610.1| Amino-acid ABC transporter binding protein ybeJ [Ralstonia solanacearum PSI07] Length = 299 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 49/232 (21%), Positives = 94/232 (40%), Gaps = 7/232 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQYLP 82 L I+ G ++ V F+ +A G G+ +D C + +I P K+QY+P Sbjct: 31 LDRIRDTGTIRLAYREDSVPFSYSEA-GKPIGYSIDICSRVVESIRTSLKRPELKVQYVP 89 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + A R + S + D+ +T+ R + AF Y ++ G+ Sbjct: 90 VTAVNRMDTIASGKADLECGSTNNAPDRREKV--AFTIPHYITKGRMLVKASSGLQQWDD 147 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G ++ G++ + + M H + ++ A + DA+ GD L Sbjct: 148 LHGKTVVAARGSSASDVMHKLNDSTGMGMHTVDTNDLKTAFAMLSTGKADAFAGDDVLLA 207 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 ++ T+D PSE+V+ S A + + D E+ +V + ++ E+ Sbjct: 208 GMRATSDNPSEYVVAGKTQLVSSYAMMLSKQDAEFKKLVDQSMTRLIVDGEV 259 >gi|288871529|ref|ZP_06117940.2| CjaA protein [Clostridium hathewayi DSM 13479] gi|288863100|gb|EFC95398.1| CjaA protein [Clostridium hathewayi DSM 13479] Length = 300 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 56/222 (25%), Positives = 94/222 (42%), Gaps = 25/222 (11%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L +IK+ G + G+ + F V NG+++G+DV F + D KI Y+ A Sbjct: 55 LDEIKESGTINIGVFSDKNPFGYVDENGEYQGYDVYFANRIGE---DLGVKINYISTEAA 111 Query: 87 ERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 R LQ+ + DI+ N T R E+ L + + G + + I S+ + Sbjct: 112 NRIEYLQTGKADIILANFTVTPQRAEEVDFALPYMNVAL----GVVSPDSRVIESLDNWN 167 Query: 145 GAS-ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA---HRCDAYTGDISA 200 I V +GTT E L + Y I ++ + A A A+ D + Sbjct: 168 AEDPIIVISGTTAETYLIE-------NYPDIPLQKYDSYATAKNALENGNGAAWANDNTE 220 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT---EWYN 239 + A L N V +P + S+ +APA+ +G++ +W N Sbjct: 221 VIAFALQN--AGYTVGIPSLGSQDSIAPAVSKGNSTLLDWLN 260 >gi|225386719|ref|ZP_03756483.1| hypothetical protein CLOSTASPAR_00467 [Clostridium asparagiforme DSM 15981] gi|225047197|gb|EEG57443.1| hypothetical protein CLOSTASPAR_00467 [Clostridium asparagiforme DSM 15981] Length = 306 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 49/207 (23%), Positives = 92/207 (44%), Gaps = 20/207 (9%) Query: 26 ILGDIKK---RGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFD---DPSK- 77 + D++K G LK G+ T + F+ + A G+++G + D ++ IF D +K Sbjct: 62 VTADVQKIIDAGVLKVGVKTDVPCFSLLNTATGEYEGLEDDLAYNIAGKIFGCTPDEAKE 121 Query: 78 ---IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 +++ + AK R +++ ++D++ +T+ E F + D G ++ K Sbjct: 122 KKLVEFQGVTAKTRGPLVENGELDMVIAT--FTITEERKETYNFSTPYFTDAVGLLVLKD 179 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV--FERVEEIDAAYRAHRCD 192 GI+S+ L G I V G+T++ Y + P F+ + AA A D Sbjct: 180 SGINSIEDLDGKVIGVAQGSTSQKGFEAYVAEKGINVKPTFEEFDGYPALAAALSAKNID 239 Query: 193 AYTGDISALYAL-----KLTNDRPSEH 214 ++ D + L KL +DR +E Sbjct: 240 VFSVDRAILAGYRDDTNKLLDDRYAEQ 266 >gi|299530123|ref|ZP_07043549.1| glutamate-binding protein precursor [Comamonas testosteroni S44] gi|298721780|gb|EFI62711.1| glutamate-binding protein precursor [Comamonas testosteroni S44] Length = 300 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 10/175 (5%) Query: 30 IKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 IK+ G L+ G F+ + + +G +GFD+ + ++ I D +K Q+ + + R Sbjct: 58 IKQAGTLRLGSTQTSNLFSLLNEKDGKIRGFDLGLAQLITRYILGDAAKYQFTQVTSSTR 117 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGA 146 L + Q+D++ T R + A Y+ Q ++ K K + S + L G Sbjct: 118 EQVLINNQVDMVFATYSITPARAEKISFAG---PYYTSQSGVLVKSNNKTVQSYNDLGGK 174 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 + QAG+T LA Y ++ F+ +E A R R DAY D + L Sbjct: 175 KVATQAGSTGPAILAQYAPKAVVQE----FQTHQEALDALRQGRVDAYVTDYTLL 225 >gi|221195872|ref|ZP_03568925.1| amino acid transport protein [Atopobium rimae ATCC 49626] gi|221184346|gb|EEE16740.1| amino acid transport protein [Atopobium rimae ATCC 49626] Length = 296 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 15/216 (6%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 DIKK G + G + F V +G G+DV F L+ D + Y+ + R Sbjct: 53 DIKKAGTVNIGYFSDKAPFGYVDKDGKPAGYDVVFGNRLAK---DLGVEANYISTDGLNR 109 Query: 89 FLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 LQS + DI+ N T R ++ L + I G + + I SV +L G Sbjct: 110 VPFLQSNKADIMLANFTVTDERAEKVDFSLPYMKIKL----GIVSPESAVIKSVDELKGK 165 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 + V GTT E YF+ + + + F+ + A R DA++ D + + A Sbjct: 166 KLIVSKGTTAET----YFEKNYPEVTMVKFDSYADAYNALLDGRGDAFSTDNTEVLAWVK 221 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 +N P V + D+ + +A A+ +G+T ++ Sbjct: 222 SN--PGFVVGVDDLGNADTIAAAVHKGNTSLLEFIN 255 >gi|298294202|ref|YP_003696141.1| extracellular solute-binding protein family 3 [Starkeya novella DSM 506] gi|296930713|gb|ADH91522.1| extracellular solute-binding protein family 3 [Starkeya novella DSM 506] Length = 260 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 51/221 (23%), Positives = 92/221 (41%), Gaps = 15/221 (6%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 A L DI R ++ + T F V A+ +G D+D + + K++ +P+ Sbjct: 24 ADALDDIIARKTIRVAVPTDYPPFGSVGADMQPRGMDIDVANLIGEKLG---VKVELVPV 80 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLRE--ISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 A R LQS + D+ + T R I +A+ P +FD K+ + + Sbjct: 81 TAPNRVAFLQSGKTDLTISSLGKTEERAKVIDFSIAYSP--FFDA--IFGKKEPPVKEYA 136 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 LSG I V G+ + LAD ++ FE AA+ + + + + Sbjct: 137 DLSGKKISVTRGSMQDKELADLAPKAVVQR----FEDNNSTIAAFMSGQVEMFASGTPVA 192 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A+K N P + L +++ SP +++G+T + V+ Sbjct: 193 AAIKRRN--PDLDLELKIVLANSPCYVGVVKGETRLLDKVN 231 >gi|160899821|ref|YP_001565403.1| extracellular solute-binding protein [Delftia acidovorans SPH-1] gi|160365405|gb|ABX37018.1| extracellular solute-binding protein family 3 [Delftia acidovorans SPH-1] Length = 318 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 48/175 (27%), Positives = 75/175 (42%), Gaps = 10/175 (5%) Query: 30 IKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 IK+ G L+ G F+ + + +G +GFD + L+ I D SK Q+ + + R Sbjct: 76 IKQTGTLRLGSTQTSNLFSLLNEKDGKIRGFDAGLAQLLTRYILGDASKYQFAQVTSSTR 135 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGA 146 L + Q D++ T R + A Y+ Q ++ K K + S S L+G Sbjct: 136 EQVLINNQADMVIATYSITPARAEKISFAG---PYYTSQAGVLVKASNKTVQSYSDLAGK 192 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 + QAG+T LA H K F+ +E + R R DAY D + L Sbjct: 193 KVATQAGSTGPAILAQ----HAPKAVVQEFQTHQEALDSLRQGRVDAYVTDYTLL 243 >gi|49083417|gb|AAT51027.1| PA1260 [synthetic construct] Length = 274 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 41/144 (28%), Positives = 65/144 (45%), Gaps = 5/144 (3%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 A L DI + G L+C + A + GFDVD+C L+ A+ D ++I P Sbjct: 24 QADKLDDIIESGKLRCAVTLDFPPMGSRDAQNNPVGFDVDYCNDLAKAL-DVKAEIVETP 82 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 +R AL S + D++ +T TL R ++G++ + + + + GI+S Sbjct: 83 F--PDRIPALVSGRADVIVASTSDTLERAKTIGMSIPHFAFV--KVVLTREDTGIASYED 138 Query: 143 LSGASICVQAGTTTELTLADYFKA 166 L G + AGT L L KA Sbjct: 139 LKGRPVGGTAGTFEALALEKDSKA 162 >gi|295675752|ref|YP_003604276.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] gi|295435595|gb|ADG14765.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] Length = 302 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 39/148 (26%), Positives = 69/148 (46%), Gaps = 9/148 (6%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 L F + + +A L +I K G LK + F V A+ +G+D+D L+ A+ Sbjct: 58 LAFHAGAAHADTLDNIAKTGVLKVAVPEDYPPFGSVGADMKPQGYDIDTAALLAKAMN-- 115 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE--ISLGLAFRPITYFDGQGFIMH 132 K++ +P+N+ R LQ+ ++D++ + T RE I A+ P Y+ QG Sbjct: 116 -VKLELVPVNSANRIPYLQTGKVDLVISSLGKTPEREKVIDFSSAYAP--YY--QGVFGP 170 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTL 160 +S + L+G ++ G E+ L Sbjct: 171 ADIKVSGPADLTGKTVGATRGALEEIGL 198 >gi|227551336|ref|ZP_03981385.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecium TX1330] gi|257896044|ref|ZP_05675697.1| extracellular solute-binding protein [Enterococcus faecium Com12] gi|293378784|ref|ZP_06624941.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecium PC4.1] gi|227179547|gb|EEI60519.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecium TX1330] gi|257832609|gb|EEV59030.1| extracellular solute-binding protein [Enterococcus faecium Com12] gi|292642577|gb|EFF60730.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecium PC4.1] Length = 271 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 52/214 (24%), Positives = 95/214 (44%), Gaps = 21/214 (9%) Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 +T L G ++++ +GFDVD +A++ I + K +++ + +K R L++ ID + Sbjct: 50 DTRLFGMMDIESR-TVQGFDVDIAKAITEKILGENGKAEFVEVTSKTRIPLLKNGNIDAI 108 Query: 101 SRNTDWTLLREISLGLAFRPITYFD-GQGFIMHKKKGISSVSQLSGASICVQAGTTTELT 159 T+ E + F + YFD GQ ++ K I SV L+ +TT L Sbjct: 109 I--ATMTITDERKKQVDFSDV-YFDAGQALLVKKGSRIKSVDDLN--------ASTTVLA 157 Query: 160 LADYFKAHNMKYHP-----IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 + A N++ H + E E A ++ + DA T D + L L + ++ P E+ Sbjct: 158 VKGSTSAANIRQHAPDANILELENYAEAFTALQSGQGDAMTTDNAIL--LGIADENP-EY 214 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 ++ + P AI +G + V+ M Sbjct: 215 ELVGGTFTNEPYGIAINKGQENFLKAVNQALEEM 248 >gi|119896733|ref|YP_931946.1| putative glutamine-binding protein [Azoarcus sp. BH72] gi|119669146|emb|CAL93059.1| putative glutamine-binding protein [Azoarcus sp. BH72] Length = 299 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 47/220 (21%), Positives = 94/220 (42%), Gaps = 8/220 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD---PS-KIQYLP 82 L IK G + G V F+ + A+ G+ +D C + A+ D+ P +++Y Sbjct: 30 LKKIKDSGTITVGHRESSVPFSYLDADQKPVGYAMDLCAKVVDAVKDELKLPKLEVKYQA 89 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF-DGQGFIMHKKKGISSVS 141 + ++ R +Q+ IDI +T ++ R+ +G + + YF + K GI + Sbjct: 90 VTSQNRIPLMQNGTIDIECGSTTNSVQRQQQVGFS---VNYFVTSVRMAVRKDSGIKDIG 146 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L+G + GTT++ + K ++ I + + + R A+ D L Sbjct: 147 DLNGKPVATTTGTTSDALIKQNEKGKSIDVRNIYGKDHADSFLMVESGRAAAFVMDDILL 206 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 L ++ P+ + I+ + P + + DTE+ +V Sbjct: 207 AGLIASSKNPAAYEIVGPSLRDEPYGVMLRKDDTEFKAVV 246 >gi|283833316|ref|ZP_06353057.1| extracellular solute-binding protein [Citrobacter youngae ATCC 29220] gi|291070954|gb|EFE09063.1| extracellular solute-binding protein [Citrobacter youngae ATCC 29220] Length = 277 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 55/227 (24%), Positives = 92/227 (40%), Gaps = 11/227 (4%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDP 75 ++ A L DIK G +K F + A G+DVDF AL+ ++ Sbjct: 24 ISASQAQADQLADIKAAGVVKVATFDANPPFGSIDAKTHKIVGYDVDFAEALAKSLG--- 80 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 K++ + N R LQS + D++ D T+ E + + F + GQ F++ K Sbjct: 81 VKLELVATNPANRIPLLQSGKADLIV--ADITITPERAQVIDFSVPYFVTGQQFLVPAKS 138 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 + + S A I GTT E L F + + ++ + A R A T Sbjct: 139 P-DKLDEYSKARIGAVKGTTGEQALHQRFPQSRV----LAYDDIPLALTALRNGNVQAIT 193 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 D + L L ++ ILPD++SK + + +G+ V+ Sbjct: 194 QDSTILAGLLGGAPDKADFKILPDLLSKEEIGVGVKKGEPALLKAVN 240 >gi|264678000|ref|YP_003277907.1| glutamate-binding protein precursor [Comamonas testosteroni CNB-2] gi|262208513|gb|ACY32611.1| glutamate-binding protein precursor [Comamonas testosteroni CNB-2] Length = 300 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 10/175 (5%) Query: 30 IKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 IK+ G L+ G F+ + + +G +GFD+ + ++ I D +K Q+ + + R Sbjct: 58 IKQAGTLRLGSTQTSNLFSLLNEKDGKIRGFDLGLAQLITRYILGDAAKYQFTQVTSSTR 117 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGA 146 L + Q+D++ T R + A Y+ Q ++ K K + S + L G Sbjct: 118 EQVLINNQVDMVFATYSITPARAEKISFAG---PYYTSQSGVLVKSNNKTVQSYNDLGGK 174 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 + QAG+T LA Y ++ F+ +E A R R DAY D + L Sbjct: 175 KVATQAGSTGPAILAQYAPKAVVQE----FQTHQEALDALRQGRVDAYVTDYTLL 225 >gi|49082882|gb|AAT50841.1| PA2204 [synthetic construct] Length = 269 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 63/253 (24%), Positives = 107/253 (42%), Gaps = 18/253 (7%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRAL 67 + + L S A L DI+K G L+ + GF + K+ +G DVD+ +AL Sbjct: 7 ITALALALISGLAQADRLEDIRKAGVLRVASFDSNPPFGFVDAKSK-QIEGLDVDYAKAL 65 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF-DG 126 + + ++Q LP N R L + ++D++ N +T+ E + + F I YF G Sbjct: 66 ADKLG---VRLQVLPTNPANRIPLLTANKVDLVLAN--FTITPERAQQVDFS-IPYFSSG 119 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 Q FI+ KK ++S L+ + V GT E L + F + I ++ A Sbjct: 120 QQFIV-KKGTLTSPEVLNKWRVGVDKGTVNEGVLREKFPGAKV----IAYDDTPFAFTAL 174 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 R + A T D L L ++ + P IS + I +G+ + + Sbjct: 175 RNGQVQAITQDGPKLIGLLANVPDRDKYEVPPFTISNDLIGVGIPKGEKA---LTEFVDK 231 Query: 247 AMVTAEELGITQK 259 ++ E+ G QK Sbjct: 232 SLRELEQDGQAQK 244 >gi|67921803|ref|ZP_00515320.1| extracellular solute-binding protein, family 3 [Crocosphaera watsonii WH 8501] gi|67856395|gb|EAM51637.1| extracellular solute-binding protein, family 3 [Crocosphaera watsonii WH 8501] Length = 294 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 55/200 (27%), Positives = 83/200 (41%), Gaps = 16/200 (8%) Query: 9 ILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 I+ L +LFF+SF ++ ++L I K G LK GI V F NGD +G +DF Sbjct: 14 IINLFLLFFSSFPSHGQEETVLERIDKTGLLKVGIREDAVPFGYRDINGDLEGLCLDFIA 73 Query: 66 ALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDI-LSRNTDWTLLREI-SLGLAFR 119 L + + +K I+ RF + + +DI NT +RE+ + F Sbjct: 74 VLRDKLKQELNKQVIAIKVYKSTLFNRFELVSDRIVDIECGPNT----IRELPEYQIQFS 129 Query: 120 PITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 G ++ K K I L +I V TT E +A+ + N+ V Sbjct: 130 TPFLLTGTQLLIEADKAKTIDPDGSLENVNIGVLKNTTNEQLMAEKYPLANLVQFQGVTG 189 Query: 178 RVEEIDAAYRAHRCDAYTGD 197 R I A R + DA+ D Sbjct: 190 RYRGI-QALRGDKIDAFASD 208 >gi|296272604|ref|YP_003655235.1| family 3 extracellular solute-binding protein [Arcobacter nitrofigilis DSM 7299] gi|296096778|gb|ADG92728.1| extracellular solute-binding protein family 3 [Arcobacter nitrofigilis DSM 7299] Length = 260 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 42/165 (25%), Positives = 77/165 (46%), Gaps = 14/165 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M+K+ + +L + L S NA+ L DIKK G +K + F V + +G+D Sbjct: 1 MFKNVLLKVLAIGALLSVSL-LNANQLADIKKSGVIKIAVPQDFAPFGSVSKDMSIQGYD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI----LSRNTDWTLLREISLGL 116 VD + ++ + K++ +P+ + R LQ+ ++++ L +N + R I Sbjct: 60 VDTAKLIAKKL---GVKLELIPVASANRIPYLQTGKVNLTISSLGKNPERA--RAIDFSD 114 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 A+ I Y G K +SS + L G ++ V GT ++ L+ Sbjct: 115 AY-AIFYL---GVFGSKDVKVSSPADLKGKTVGVTRGTIEDIELS 155 >gi|264676713|ref|YP_003276619.1| amino-acid ABC transporter binding protein ybeJ precursor [Comamonas testosteroni CNB-2] gi|262207225|gb|ACY31323.1| amino-acid ABC transporter binding protein ybeJ precursor [Comamonas testosteroni CNB-2] Length = 303 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 46/208 (22%), Positives = 88/208 (42%), Gaps = 4/208 (1%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 + + S L ++K G + G+ A + AN + G+ V+ C + + I +KI+ Sbjct: 28 TASGSTLEKLQKTGKVVIGVRESSAPMAYAIGANHRFTGYHVELCEKVLAQIAPS-AKIE 86 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 Y+ + A+ +Q+ +D+ T L R+ + A TY + ++S Sbjct: 87 YMAITAQNTMPLVQNGTVDLGCGPTTNNLSRQKQVSFAV--TTYVSQVRMAVRADSPVTS 144 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 QL G ++ AGTT L Y +N+K + + E + R DA+ D + Sbjct: 145 FKQLDGKTVAASAGTTAVQLLRKYSHDNNVKLPTQLGKDHFESFLMLESGRADAFVLDDN 204 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLA 227 L + + P + I+ + + P+A Sbjct: 205 LLAGVIANSKDPRGYKIVGEALGSEPIA 232 >gi|331002715|ref|ZP_08326230.1| hypothetical protein HMPREF0491_01092 [Lachnospiraceae oral taxon 107 str. F0167] gi|330407128|gb|EGG86632.1| hypothetical protein HMPREF0491_01092 [Lachnospiraceae oral taxon 107 str. F0167] Length = 283 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 54/221 (24%), Positives = 95/221 (42%), Gaps = 15/221 (6%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 N L +IKK G + G+ + F V NG+++G+D+ F L+ D KI Y+ Sbjct: 34 NFRTLDEIKKSGTINIGVFSDKHPFGYVDENGEYQGYDIYFGNRLAE---DLGVKINYVS 90 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 A R L++ ++DI+ N T R ++ A + G G I +K ++S+ Sbjct: 91 TEAANRVEYLETGKVDIILANFTVTPERAEAVDFALPYMNV--GLGVISSEKDAVASLDN 148 Query: 143 LSG-ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 + + V +GTT E + + N+K ++ A A+ D + + Sbjct: 149 WNADDEMIVISGTTAEPYMTKNYP--NIKLQK--YDTYANAKNALLNGTGKAWVNDNTEV 204 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT---EWYN 239 A N P V + + +APA+ +G++ EW N Sbjct: 205 IA--FANSNPGYVVGIDSLGVNDTIAPAVTKGNSSLLEWIN 243 >gi|291618612|ref|YP_003521354.1| GlnH [Pantoea ananatis LMG 20103] gi|291153642|gb|ADD78226.1| GlnH [Pantoea ananatis LMG 20103] Length = 280 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 52/223 (23%), Positives = 92/223 (41%), Gaps = 13/223 (5%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 T+ + AS L + +RG L+ G F G+ G+DVD +AL+ A+ K Sbjct: 35 TAGAAPASTLQTVLQRGTLRVGDCLSFAPFGFYDKAGNPDGYDVDLAKALAKAM---GVK 91 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++ + + R LQ+ ++D++ N L R +G F + ++ K GI Sbjct: 92 LEMVNTTSANRIPNLQTNKVDVVFCNFTRNLERAKEIG--FTQPYVVASEAMLVRKVSGI 149 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 S ++G +I G+T D ++ + ++ + A + + DA D Sbjct: 150 KSAHDMAGKTIATVKGSTN----GDEVRSMGIDVKIQEYDSSQAAILAVKQGQADAMIED 205 Query: 198 ISAL-YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + L Y KL P+ V ++ A + QGD W N Sbjct: 206 NNFLAYQAKLD---PTLEVTNEALVPLEYNAFGVKQGDQVWTN 245 >gi|317053314|ref|YP_004119081.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b] gi|316953053|gb|ADU72525.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b] Length = 275 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 64/240 (26%), Positives = 99/240 (41%), Gaps = 28/240 (11%) Query: 8 SILCLIIL--FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFC 64 +IL + +L S + +A L DIK G +K F + A + G+DVDF Sbjct: 11 NILTIAVLATLLVSAAASADQLADIKAAGVIKVATFDANPPFGSIDAKSHELVGYDVDFA 70 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 +AL++++ K++ + N R LQS + D++ D T+ E + + F + Sbjct: 71 KALANSLG---VKLKLVATNPANRIPLLQSGKADLIV--ADITITPERAQVIDFSTPYFV 125 Query: 125 DGQGFIMHKKKGISSVSQL---SGASICVQAGTTTELTLAD-YFKAHNMKYHPIVFERVE 180 GQ F++ +S QL S A I GTT E L Y +A + Y I Sbjct: 126 TGQQFLVPA----TSPDQLDKYSHARIGAVKGTTGEQALHQRYPQARVLAYDDIPLALT- 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA-------PAIIQG 233 A R A T D + L L ILP ++SK + PA++Q Sbjct: 181 ----ALRNGNVQAITQDSTILAGLLAAAPDKENFKILPALLSKEEIGVGVKKDQPALLQA 236 >gi|300311590|ref|YP_003775682.1| amino acid ABC transporter/signal transduction system periplasmic protein/domain-containing protein [Herbaspirillum seropedicae SmR1] gi|300074375|gb|ADJ63774.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain protein [Herbaspirillum seropedicae SmR1] Length = 267 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 64/248 (25%), Positives = 111/248 (44%), Gaps = 27/248 (10%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 A L DI+K G ++ G+ F V + +G D+D R ++ + K+Q +P+ Sbjct: 26 ADALADIQKNGVVRIGVPQDFAPFGSVNTDLQLQGLDIDVARLIAQKMG---VKLQLVPV 82 Query: 84 NAKERFLALQSKQIDI----LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 + R LQ+ + D+ L RN + + + S +P ++ F + K +S Sbjct: 83 ASANRIAYLQTHKADLVISTLGRNAEREKVIDFS-----QPYAPYNNSVFGVASVK-VSG 136 Query: 140 VSQLSGASICVQAGTTTELTLADYF-KAHNMKYHPIVFERVEEIDAAYRAHRCDAY-TGD 197 + L+ ++ V GT +L L D K+ +K +E + +AY + + TGD Sbjct: 137 PADLADKTVGVARGTFQDLQLTDTAPKSATIKR----YEDNNAMISAYVSGQVQLVGTGD 192 Query: 198 ISALYAL--KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL- 254 A YAL K N++P +L II +S + +G+ V+ A + EL Sbjct: 193 FVA-YALAEKAPNNKP----VLKYIIQESACNVGLNKGEPALLAKVNEALTAAKKSGELN 247 Query: 255 GITQKNIN 262 GI QK +N Sbjct: 248 GIVQKWLN 255 >gi|319940827|ref|ZP_08015166.1| extracellular solute-binding protein family 3 [Sutterella wadsworthensis 3_1_45B] gi|319805709|gb|EFW02490.1| extracellular solute-binding protein family 3 [Sutterella wadsworthensis 3_1_45B] Length = 300 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 66/271 (24%), Positives = 117/271 (43%), Gaps = 25/271 (9%) Query: 11 CLIILFFTSFSTNASILGDIKK---RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 CL L + + A + G +KK G + G V F+ + A+G G+ C+ + Sbjct: 15 CLFAL--SGVVSAAELTGTLKKVQETGSITLGYRESSVPFSYLNADGKPVGYAFTVCQRV 72 Query: 68 SSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 + A+ + ++Y + + R +Q+ +DI +T +L R+ + ++Y Sbjct: 73 ADAVKSELGLKTLDVKYQAVTSANRIPLIQNGTVDIECGSTTNSLKRQREAAFS---VSY 129 Query: 124 FDGQ-GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 F Q + K GI S+ L+G ++ V +GTT+ + ++ KAHN+K ++ + E Sbjct: 130 FGIQVSAAVWKSSGIKSLEDLNGKTVTVTSGTTSVALIKEFEKAHNLKIRYLMTKDFAES 189 Query: 183 DAAYRAHRCDAYTGDISALYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 R DA+ D L A +++N SE IL + P + D + +V Sbjct: 190 MQLVANKRADAFILD-DVLLAGQISNLPNASEFTILDASLGVEPYGAMFRKDDAPFKAVV 248 Query: 242 SWTHYAMVTAEELG----------ITQKNIN 262 T M+ + EL I KNIN Sbjct: 249 DKTVKGMIASGELAKLYSTWFESPIPPKNIN 279 >gi|213965170|ref|ZP_03393368.1| bacterial extracellular solute-binding protein, family 3 [Corynebacterium amycolatum SK46] gi|213952284|gb|EEB63668.1| bacterial extracellular solute-binding protein, family 3 [Corynebacterium amycolatum SK46] Length = 359 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 34/137 (24%), Positives = 66/137 (48%), Gaps = 17/137 (12%) Query: 29 DIKKRGFLKCGINTGL--VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 +I +RG + G++ L + F + + G+ GF+V + ++ IFD+P +++ +++ Sbjct: 96 EIYQRGRIIVGVDQSLNLLSFRDF-STGELSGFEVSLAQEIARDIFDNPDAVEFRFVDSN 154 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ------GFIMHKKKGISSV 140 ER AL+ +D+ +LR +++ A R F G ++ G +S Sbjct: 155 ERTAALEDGTVDV--------VLRTMTVTDARRERVLFSAPYLTARAGVLVSSPGGDASP 206 Query: 141 SQLSGASICVQAGTTTE 157 + ICV G+TTE Sbjct: 207 EDVEDGRICVSRGSTTE 223 >gi|15597400|ref|NP_250894.1| binding protein component of ABC transporter [Pseudomonas aeruginosa PAO1] gi|218891843|ref|YP_002440710.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa LESB58] gi|254235230|ref|ZP_04928553.1| hypothetical protein PACG_01121 [Pseudomonas aeruginosa C3719] gi|254240626|ref|ZP_04933948.1| hypothetical protein PA2G_01285 [Pseudomonas aeruginosa 2192] gi|296389383|ref|ZP_06878858.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa PAb1] gi|313110962|ref|ZP_07796802.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa 39016] gi|9948227|gb|AAG05592.1|AE004647_1 probable binding protein component of ABC transporter [Pseudomonas aeruginosa PAO1] gi|126167161|gb|EAZ52672.1| hypothetical protein PACG_01121 [Pseudomonas aeruginosa C3719] gi|126194004|gb|EAZ58067.1| hypothetical protein PA2G_01285 [Pseudomonas aeruginosa 2192] gi|218772069|emb|CAW27848.1| probable binding protein component of ABC transporter [Pseudomonas aeruginosa LESB58] gi|310883304|gb|EFQ41898.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa 39016] Length = 268 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 63/253 (24%), Positives = 107/253 (42%), Gaps = 18/253 (7%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRAL 67 + + L S A L DI+K G L+ + GF + K+ +G DVD+ +AL Sbjct: 7 ITALALALISGLAQADRLEDIRKAGVLRVASFDSNPPFGFVDAKSK-QIEGLDVDYAKAL 65 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF-DG 126 + + ++Q LP N R L + ++D++ N +T+ E + + F I YF G Sbjct: 66 ADKLG---VRLQVLPTNPANRIPLLTANKVDLVLAN--FTITPERAQQVDFS-IPYFSSG 119 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 Q FI+ KK ++S L+ + V GT E L + F + I ++ A Sbjct: 120 QQFIV-KKGTLTSPEVLNKWRVGVDKGTVNEGVLREKFPGAKV----IAYDDTPFAFTAL 174 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 R + A T D L L ++ + P IS + I +G+ + + Sbjct: 175 RNGQVQAITQDGPKLIGLLANVPDRDKYEVPPFTISNDLIGVGIPKGEKA---LTEFVDK 231 Query: 247 AMVTAEELGITQK 259 ++ E+ G QK Sbjct: 232 SLRELEQDGQAQK 244 >gi|327394992|dbj|BAK12414.1| glutamine-binding protein precursor GlnH [Pantoea ananatis AJ13355] Length = 280 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 52/223 (23%), Positives = 92/223 (41%), Gaps = 13/223 (5%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 T+ + AS L + +RG L+ G F G+ G+DVD +AL+ A+ K Sbjct: 35 TAGAAPASTLQTVLQRGTLRVGDCLSFAPFGFYDKAGNPDGYDVDLAKALAKAM---GVK 91 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++ + + R LQ+ ++D++ N L R +G F + ++ K GI Sbjct: 92 LEMVNTTSANRIPNLQTNKVDVVFCNFTRNLERAKEIG--FTQPYVVASEAMLVRKVSGI 149 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 S ++G +I G+T D ++ + ++ + A + + DA D Sbjct: 150 KSAHDMAGKTIATVKGSTN----GDEVRSMGIDVKIQEYDSSQAAILAVKQGQADAMIED 205 Query: 198 ISAL-YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + L Y KL P+ V ++ A + QGD W N Sbjct: 206 NNFLAYQAKLD---PTLEVTNEALVPLEYNAFGVKQGDQVWTN 245 >gi|295107461|emb|CBL05004.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [Gordonibacter pamelaeae 7-10-1-b] Length = 274 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 47/169 (27%), Positives = 75/169 (44%), Gaps = 7/169 (4%) Query: 36 LKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L+ G + GF + G+ +G +VD R L+ I DP+ +Q +N R L + Sbjct: 37 LRVGTKIDVPGFGFQNPETGNIEGMEVDIARELAKRIKGDPNALQVTGVNVTTRGAMLDN 96 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 +D T R+ S + RP Y D G ++ K GI+ ++ L G ++ V Sbjct: 97 GTLDATLATFTITEARKKSYNFS-RPY-YTDHIGVLVKKSSGITDLADLDGKTVGVALSA 154 Query: 155 TT--ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 TT +LT A +MK+ + E+ A R DA++ D S L Sbjct: 155 TTRDKLTAAGDEIGIHMKFAE--YSTYPEVKIALVTGRVDAFSVDRSIL 201 >gi|254253239|ref|ZP_04946557.1| ABC-type amino acid transport/signal transduction systems periplasmic component [Burkholderia dolosa AUO158] gi|124895848|gb|EAY69728.1| ABC-type amino acid transport/signal transduction systems periplasmic component [Burkholderia dolosa AUO158] Length = 300 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 50/219 (22%), Positives = 90/219 (41%), Gaps = 6/219 (2%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQYLP 82 L IK G + G + F+ N G+ DF + A+ + P+ +++ +P Sbjct: 31 LKKIKDTGVIALGHRESSIPFSYYDQNQQVVGYSRDFQMKVVDAVKKKLNLPNLQVKNIP 90 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R +Q+ +DI +T L R+ AF + G + K GI + Sbjct: 91 VTSQNRIPLVQNGTVDIECGSTTNNLERQQQA--AFSNTIFVIGTRLMTKKDSGIKDFAD 148 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G ++ AGTT+E L M + I + + + R A+ D + L Sbjct: 149 LKGKTVVTTAGTTSERLLRKMNNDKQMGMNIISAKDHGDSFNTLESGRAVAFMMDDALLA 208 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + +P E VI+ S+ + +GDTE+ +V Sbjct: 209 GERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDTEFKKVV 247 >gi|209520965|ref|ZP_03269702.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] gi|209498602|gb|EDZ98720.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] Length = 300 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 47/205 (22%), Positives = 84/205 (40%), Gaps = 11/205 (5%) Query: 19 SFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDD 74 +F+ +A S L I++ G + G V F+ V +N GF D C + A+ Sbjct: 22 AFAQDATSTLAKIQQSGVIAIGHRETSVPFSYVDSNNQVIGFSQDLCNKVIDAVKVKTKR 81 Query: 75 PS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE--ISLGLAFRPITYFDGQGFIM 131 P K++++P+ ++ R +Q+ +D+ T R+ ++ G F + + Sbjct: 82 PDLKVRFIPVTSQNRIPLVQNGTVDLECGVTTNLAARQSQVTFGDTF----FVATTRLLT 137 Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191 K GI L+G ++ GTT+E L + M I + E + R Sbjct: 138 RKDSGIKDFPDLAGKTVVTNQGTTSERILRKMNEDKKMNMQIISAKDYGEGRLTLESGRA 197 Query: 192 DAYTGDISALYALKLTNDRPSEHVI 216 AY D L + +PS+ +I Sbjct: 198 VAYMMDDVLLAGTRTLTAKPSDWII 222 >gi|291485150|dbj|BAI86225.1| glutamine ABC transporter, glutamine-binding protein [Bacillus subtilis subsp. natto BEST195] Length = 273 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 38/158 (24%), Positives = 72/158 (45%), Gaps = 7/158 (4%) Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 ++G+ +GFD+D + ++ I D K ++ + +K R LQ+ ID + T+ E Sbjct: 65 SSGEIEGFDIDIAKQIAKDILVDEKKAEFKEVTSKTRIPMLQNGDIDAIVAT--MTITDE 122 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMK 170 + F + + GQ ++ K I SV L G+ + G+T+ + + ++ Sbjct: 123 RKKEVDFSDVYFEAGQSLLVKKGSKIKSVEDLDKGSKVLAVKGSTSSQNIREKAPEASV- 181 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 + FE E A ++ + DA T D + LY + N Sbjct: 182 ---LEFENYAEAFTALKSGQGDALTTDNAILYGMADEN 216 >gi|152985853|ref|YP_001351140.1| putative ABC transporter binding protein subunit [Pseudomonas aeruginosa PA7] gi|150961011|gb|ABR83036.1| probable binding protein component of ABC transporter [Pseudomonas aeruginosa PA7] Length = 299 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 57/270 (21%), Positives = 113/270 (41%), Gaps = 11/270 (4%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKK---RGFLKCGINTGLVGFAEVKAN-GDWKG 58 K S L + + + G +KK G + G V F+ + N G G Sbjct: 2 KTLVSSTLAFSLSLAIGAAQAEELSGTLKKVADNGTITLGYRDASVPFSYLGDNSGRPMG 61 Query: 59 FDVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + VD L + + +++Y + ++ R +Q+ +D+ +T T R+ + Sbjct: 62 YSVDLAGKVVERLKATLGKPELRVKYNLVTSQTRIPLVQNGTVDLECGSTGVTAERQKQV 121 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 ++ I Y GQ + K GI+ L G ++ AGTT E L +Y H + + + Sbjct: 122 AFSYGFI-YVKGQ-LLTRKDSGIAHFDDLKGRNVVTTAGTTNERYLKNYNAEHKLGMNVV 179 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + E ++ R A+ D + LY + +P + V++ + S+ + + + D Sbjct: 180 SAKDHGEAFQMLQSGRAVAFYMDDALLYGERAKARQPHDWVVVGEPQSREIYSCMVRKDD 239 Query: 235 TEWYNIVSWTHYAMVTAEEL-GITQKNINQ 263 ++ +V+ T + + E+ GI Q+ Q Sbjct: 240 PQFLALVNETLAGLYRSGEIQGIYQRWFQQ 269 >gi|319782449|ref|YP_004141925.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168337|gb|ADV11875.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 268 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 54/206 (26%), Positives = 83/206 (40%), Gaps = 17/206 (8%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L DI KRG L+ + T F+ V ANG+ G V+ ++ + KI +L + Sbjct: 31 LDDITKRGELRVAVQTQGPPFSLVGANGERTGSSVELAELMAKEM---GVKITFLDFDWD 87 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSG 145 AL S + D+L + TL R + + P Y F K + + G Sbjct: 88 GLIPALLSGKADLLVADMTPTLARGMKVAFT-TPYMYTGSTVFTKADSKFKTTEDCKAKG 146 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYH----PIVFERVEEIDAAYRAHRCDAYTGDISAL 201 I V G T E + F ++K + P++ + V A + A G +A Sbjct: 147 TKIAVLLGATGEKEAKNAFPDADIKSYKGGGPLLLDAVNNGQADCGVNDVSAVKGQSTAY 206 Query: 202 YALKLTNDRPSEHVILPDIISKSPLA 227 A T I+PD++SK PLA Sbjct: 207 PAGTFT--------IMPDLLSKEPLA 224 >gi|222081074|ref|YP_002540437.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221725753|gb|ACM28842.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 275 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 9/148 (6%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72 L ++ S S L I + L+CGI ++ GF N + +GFDV +C+ +++A+ Sbjct: 17 LTLSAHSYAQSALDTIVQSKKLRCGIMLDSPPAGFRNT--NNEPEGFDVVYCKDMAAALG 74 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 +P ++ + +R AL S +ID+L +T T R +L +AF + G + Sbjct: 75 AEPEIVE---TPSPDRIPALVSNRIDVLIASTTPTPKR--ALTVAFTQPYMNNTMGVVTR 129 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTL 160 K GI + + LS + G+T E L Sbjct: 130 KDTGIKAYADLSSKKLGGVVGSTPEQLL 157 >gi|160901104|ref|YP_001566686.1| extracellular solute-binding protein [Delftia acidovorans SPH-1] gi|160366688|gb|ABX38301.1| extracellular solute-binding protein family 3 [Delftia acidovorans SPH-1] Length = 299 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 52/251 (20%), Positives = 101/251 (40%), Gaps = 5/251 (1%) Query: 7 VSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFA-EVKANGDWKGFDVDFC 64 V++ C++ + + A+ L I+ G + G+ A + G+ V+ C Sbjct: 8 VAMACVVAATGAAHAQEAAGTLDKIQSTGKVVMGVRESSAPMAYAFGTTQKYVGYHVELC 67 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 + + I +KI+Y+ L ++ +Q+ +DI T L R+ + AF TY Sbjct: 68 EKVLAQIVPK-AKIEYMALTSQNTMPLVQNGTVDIGCGPTTNNLARQKQV--AFAVTTYV 124 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 + GI+S QL G + AGTT L Y + + + + + E Sbjct: 125 SQVRMAVRADSGITSFKQLDGKPVAASAGTTAVQLLRKYGRDNGVNLPTSLGKDHFESFL 184 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + R DA+ D + L + + P+ I+ +++ P+A + D + V Sbjct: 185 MLESGRADAFVLDDNLLAGVIANSKNPAGFKIVGEVLGSEPIAILFRRDDPAFKKAVDDV 244 Query: 245 HYAMVTAEELG 255 M+ + E+ Sbjct: 245 LVGMMASGEVA 255 >gi|329666939|gb|AEB92887.1| Glutamine ABC transporter, periplasmic glutamine-binding protein [Lactobacillus johnsonii DPC 6026] Length = 273 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 53/241 (21%), Positives = 100/241 (41%), Gaps = 18/241 (7%) Query: 10 LCLIILFFTSFSTNA------SILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDV 61 L I+ F+ F +A ++ ++KK + G+ +T L G +K G +GF+V Sbjct: 8 FSLFIVLFSVFLLSACQKNTRNVYQEVKKSNEITWGVKADTRLFGLMSIKT-GKIEGFEV 66 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D AL+ I +K ++ AK + L++ ID + T+ E + F Sbjct: 67 DLANALTKEILGKNAKANFVQTTAKTKIPLLKNGNIDAVL--AAMTITPERKKQIDFSDP 124 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 ++ GQ ++ I S+ ++G + GTT + K K + F+ + Sbjct: 125 YFYAGQSLLVKDDSTIKSIKDMNGKTALAVKGTTAVANV----KKFAPKAKVLEFDDYGQ 180 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A +A + A T D L + N + ++ +K P A+ +G T+ N + Sbjct: 181 AFTALKAGQGQAMTTDNGLLAGIATEN---KGYKLVGGTYTKEPYGIAVNKGQTQMKNAI 237 Query: 242 S 242 + Sbjct: 238 N 238 >gi|218507942|ref|ZP_03505820.1| general L-amino acid ABC transporter, substrate-binding protein [Rhizobium etli Brasil 5] Length = 65 Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 24/49 (48%), Positives = 29/49 (59%), Gaps = 1/49 (2%) Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 +TGL GFA A+G+W GFDVDFC S F P K+ P +A RF Sbjct: 4 HTGLAGFAAPDASGNWAGFDVDFCMP-SLPPFSRPDKVNSPPFSAANRF 51 >gi|317047031|ref|YP_004114679.1| family 3 extracellular solute-binding protein [Pantoea sp. At-9b] gi|316948648|gb|ADU68123.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b] Length = 261 Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 39/160 (24%), Positives = 72/160 (45%), Gaps = 9/160 (5%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K +++ ++ S A L DI+KRG ++ + F V + +G+D+D Sbjct: 2 KKVLMAVAGAALMMAQVGSAMADQLQDIQKRGVIRIAVPQDFPPFGSVGTDLQPQGYDID 61 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE--ISLGLAFRP 120 + L+ + K+Q +P+++ R LQ+ ++D++ + RE I A+ P Sbjct: 62 MAKYLAKEM---KLKLQLVPVSSANRVPYLQTDKVDLVISSMGKNAEREKVIDFSRAYAP 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 +F G K + I + LSG SI V G ++ L Sbjct: 119 --FF--LGVFGPKGEEIKDAAALSGKSIGVTRGAVEDMVL 154 >gi|325684596|gb|EGD26755.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 281 Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 52/238 (21%), Positives = 106/238 (44%), Gaps = 15/238 (6%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVD 62 F +L ++L S S ++S +K+ + G+ +T L +V + G GF+VD Sbjct: 11 FMAVLLLSLVLTACSHSQSSSTYDRVKQTNTITWGMRADTRLFSMMDVDS-GKATGFEVD 69 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQID-ILSRNTDWTLLREISLGLAFRPI 121 RA++ I K++ ++ K R + L+ +D +++ T+ R+I + F Sbjct: 70 LARAITKQILGPKGKMKIEYISEKSRIMDLKIGNVDAVMATMTNTPDRRKI---INFSDT 126 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G+ I+ KK ++S+ + + SI G+T + + Y K I ++ Sbjct: 127 YFMAGETLIVPKKSKLNSIKDFNNSKYSIAAVKGSTADSDVHKYAP----KSRVIFYDDY 182 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 A ++ + +A D + L L +D + +LPD + P I +G+ ++ Sbjct: 183 GSCYNALKSGKANAMVSDNAVLAG--LISDDKDKFKMLPDTFTVEPYGIGIKKGEDKF 238 >gi|288935409|ref|YP_003439468.1| extracellular solute-binding protein family 3 [Klebsiella variicola At-22] gi|288890118|gb|ADC58436.1| extracellular solute-binding protein family 3 [Klebsiella variicola At-22] Length = 261 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 39/160 (24%), Positives = 71/160 (44%), Gaps = 9/160 (5%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K +++ L + + A L DI+KRG ++ + F V + +G+D+D Sbjct: 2 KKLLIALAGAACLLSSVSAAQADQLQDIEKRGVIRIAVPQDFPPFGSVGTDLQPQGYDID 61 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE--ISLGLAFRP 120 R L+ ++ K+Q +P+ + R LQ+ ++D++ + RE I A+ P Sbjct: 62 MARYLAKSM---KLKLQLVPVTSANRVPYLQTDKVDLVISSLGKNAEREKVIDFSRAYAP 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 +F G K + + LSG SI V G ++ L Sbjct: 119 --FF--LGVFGPKGAELKDAAALSGKSIGVTRGAVEDMVL 154 >gi|257461157|ref|ZP_05626255.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] gi|257441531|gb|EEV16676.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] Length = 267 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 45/203 (22%), Positives = 92/203 (45%), Gaps = 14/203 (6%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD-DPSKIQYLP 82 A+ L +I+ G ++ G+ G F+E+ + G ++GF+++ A++ AIF ++Q++ Sbjct: 16 ANTLQEIRNSGVIRVGVRDGRPPFSEI-SGGKFEGFEIELANAIAKAIFGAKQGEVQFVS 74 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ-GFIMHKKKGISSVS 141 L+A +R L + ++D+++ R+ + + + YF G + K I +S Sbjct: 75 LSAADRVSYLVNNKVDMVAATFVIDSARKNHVDFS---MPYFSTNLGVLTRKADAIKDIS 131 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 +L + + GTT + +Y K + + E A R + D Y + Sbjct: 132 RLRDMRLITEEGTTVD----NYLKKEKFT-NASYCKSTSECYAMIRDGKADGYVNLNITV 186 Query: 202 YALKLTNDR---PSEHVILPDII 221 A + +D P ++ PD I Sbjct: 187 LAYAVVDDTLEVPFQNFGKPDFI 209 >gi|221067529|ref|ZP_03543634.1| extracellular solute-binding protein family 3 [Comamonas testosteroni KF-1] gi|220712552|gb|EED67920.1| extracellular solute-binding protein family 3 [Comamonas testosteroni KF-1] Length = 300 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 10/175 (5%) Query: 30 IKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 IK+ G L+ G F+ + + +G +GFD+ + ++ I D +K Q+ + + R Sbjct: 58 IKQAGTLRLGSTQTSNLFSLLNEKDGKIRGFDLGLAQLITRYILGDAAKYQFTQVTSSTR 117 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGA 146 L + Q+D++ T R + A Y+ Q ++ K K + S + L G Sbjct: 118 EQVLINNQVDMVFATYSITPARAEKISFAG---PYYTSQSGVLVKSNNKTLQSYNDLGGK 174 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 + QAG+T LA Y ++ F+ +E A R R DAY D + L Sbjct: 175 KVATQAGSTGPAILAQYAPKAVVQE----FQTHQEALDALRQGRVDAYVTDYTLL 225 >gi|227529073|ref|ZP_03959122.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus vaginalis ATCC 49540] gi|227351085|gb|EEJ41376.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus vaginalis ATCC 49540] Length = 289 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 64/269 (23%), Positives = 111/269 (41%), Gaps = 28/269 (10%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 IKK G L G++ V + NG G+DVD RA+ + + Q + + KE Sbjct: 44 IKKSGQLNIGVDDSFVPMDFRQKNGKLVGYDVDLSRAVCK-VLGLKANFQSIDWSMKE-- 100 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 L++ ID++ +T E AF + GQ ++ K GI+S + G + Sbjct: 101 TELKNGTIDVIW--NGYTATPERQKKEAFSRVYERSGQSLVVKKNSGINSFKDMQGKKLG 158 Query: 150 VQAGTT--TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA-YTGDISALYALKL 206 +Q G+T T+ + PI+++ +A R G I A Y K Sbjct: 159 LQEGSTAFTDFNKYPQLLKRYISGSPIIYQDNNSAFMDLKAGRTQGVLAGTIYAGYYAKN 218 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 +I ++ + +A + +GD +V +YA+ ++ G T + IN Sbjct: 219 LAKTNQYKLIGSNVFPQDRVAVGMRKGDR---TLVKKINYALGVLQKDG-TLRRIN---- 270 Query: 267 DTTNPDVQRFLGIDKSSNIGEALGLTKDW 295 +++LGID + LG TK++ Sbjct: 271 -------EKWLGIDSN-----YLGSTKEF 287 >gi|257461102|ref|ZP_05626200.1| polar amino acid ABC uptake transporter substrate binding protein [Campylobacter gracilis RM3268] gi|257441476|gb|EEV16621.1| polar amino acid ABC uptake transporter substrate binding protein [Campylobacter gracilis RM3268] Length = 267 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 60/246 (24%), Positives = 108/246 (43%), Gaps = 16/246 (6%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 IL I+L + N+ L DIK+ G ++ G+ F+ NG KGF+VD L Sbjct: 4 ILLSILLGAGALCANS--LADIKQAGEIRIGLQDSQPPFS-FDDNGTLKGFEVDLANELV 60 Query: 69 SAIFDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 +F + KI ++ + +K+R +L+ ++D++ T R + ++ Y+ Q Sbjct: 61 KNLFGNKKIKIDFISVASKDRVPSLEQNKVDLIISKLTVTKDRVQKVDFSY---PYYSVQ 117 Query: 128 -GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 G + K IS + Q++ I GTT E ++FK N Y E A Sbjct: 118 IGVLSRKDDNISRIDQIAHKKILSVKGTTAE----EHFK--NAGYEIATCADANECVARL 171 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 +A + D + + ND + I+ ++ +A A+ +G+TE + V+ + Sbjct: 172 KAGEGIGFADDNTVVLGYA-RNDAALDAKII-NLGKVDYIAVALSKGNTELLDAVNSSLV 229 Query: 247 AMVTAE 252 M A+ Sbjct: 230 KMYKAK 235 >gi|170749711|ref|YP_001755971.1| extracellular solute-binding protein [Methylobacterium radiotolerans JCM 2831] gi|170656233|gb|ACB25288.1| extracellular solute-binding protein family 3 [Methylobacterium radiotolerans JCM 2831] Length = 280 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 55/230 (23%), Positives = 91/230 (39%), Gaps = 16/230 (6%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 IKKRG L G+ F +G G + D L+ + K++ +P+ + R Sbjct: 38 IKKRGTLIVGVKADYKPFGFRDPSGTIIGLEPDLAADLAKRLG---VKLELVPVVSANRI 94 Query: 90 LALQSKQIDIL-SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 LQ ++D+L + +D R + A P Y D ++ K GI+ +QL G + Sbjct: 95 EFLQQGKVDLLIATLSDKPERRRVVQ--AIDPNYYSDFVNVLLPKSSGITDWAQLKGKPL 152 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 C +G +A + A + F+ E+ A + C Y D S L L + Sbjct: 153 CATSGAWYNKDVARTYGAEI-----VAFDGSEKPLFALKQGNCIGYVYDQSMLQGKLLDD 207 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS-----WTHYAMVTAEE 253 D + + + I +P A+ QG+T V W + EE Sbjct: 208 DWKANYALPLKGILDAPWMMAVAQGNTTLQAAVEDATKDWMKTGFIVNEE 257 >gi|87122495|ref|ZP_01078375.1| putative amino acid ABC transporter, periplasmic protein [Marinomonas sp. MED121] gi|86162288|gb|EAQ63573.1| putative amino acid ABC transporter, periplasmic protein [Marinomonas sp. MED121] Length = 263 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 35/158 (22%), Positives = 71/158 (44%), Gaps = 5/158 (3%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 VS +II F+ F+ A +L DI+ R ++ + F + + +G DVD Sbjct: 7 LVSKAMIIIAGFSVFNATADVLQDIQGRKLIRIAVPQDFPPFGSIGTDLKPQGIDVDMAN 66 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ + KI+ +P+ + R LQ+K++D++ + RE ++ + +F Sbjct: 67 YIADEMG---VKIEIVPVTSANRIPYLQTKKVDLVISSLGKNPEREKAIDFSTPYAPFF- 122 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163 G K ++ + L+G + V G+ +L L + Sbjct: 123 -LGVFGSKDVEVTKIEDLAGKIVGVTRGSVEDLELEKH 159 >gi|311106718|ref|YP_003979571.1| extracellular solute-binding protein, family 3 family protein 6 [Achromobacter xylosoxidans A8] gi|310761407|gb|ADP16856.1| bacterial extracellular solute-binding protein, family 3 family protein 6 [Achromobacter xylosoxidans A8] Length = 273 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 42/154 (27%), Positives = 68/154 (44%), Gaps = 7/154 (4%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFA-EVKANGDWKGFDVDF 63 F + L L L + + A + DIK RG L CG F+ + G+DVD Sbjct: 6 LFAACLGLATLALGAVA-QADQVDDIKARGELICGTLGTSQPFSFQDGTTRQLVGYDVDV 64 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 C+ ++ + KI Y L+ R L ++DIL+ N ++ R +G F Y Sbjct: 65 CKLVADKL---GVKISYKLLSVAARVPELNEGRVDILAANLGYSPDRAQQIG--FSHAYY 119 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157 Q ++ K G+ +V L+G I G+++E Sbjct: 120 VSPQKLLVRKDSGLETVEALNGRRIGATKGSSSE 153 >gi|212712951|ref|ZP_03321079.1| hypothetical protein PROVALCAL_04049 [Providencia alcalifaciens DSM 30120] gi|212684429|gb|EEB43957.1| hypothetical protein PROVALCAL_04049 [Providencia alcalifaciens DSM 30120] Length = 297 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 56/241 (23%), Positives = 89/241 (36%), Gaps = 30/241 (12%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQYLP 82 L IK G + G V F+ N G+ D+ + A+ + P +++ +P Sbjct: 28 LKKIKDNGVIVVGHRESSVPFSYYDNNQKVVGYSQDYSNLIVDAVKKKLNMPDLQVKLIP 87 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R LQ+ D +T L R+ AF + G + K GI + Sbjct: 88 ITSQNRIPLLQNGTFDFECGSTTNNLERQKQA--AFSNTIFVVGTRLLAKKDSGIKDFAD 145 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKY-------HPIVFERVEE--------IDAAYR 187 L+G ++ V +GTT+E+ L NMK H F +E DA Sbjct: 146 LAGKNVVVTSGTTSEVILNKLNDEKNMKMRIISAKDHGDSFRTLESGRAVAFMMDDALLA 205 Query: 188 AHRCDAYTGDI---------SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R A DI Y L D P ++ D IS + + A + W+ Sbjct: 206 GERAKAKQPDIWEIVAKPQTEEAYGCMLRKDDPQFKALVDDTISTAQKSGAAEKSFDRWF 265 Query: 239 N 239 N Sbjct: 266 N 266 >gi|241764991|ref|ZP_04762988.1| extracellular solute-binding protein family 3 [Acidovorax delafieldii 2AN] gi|241365425|gb|EER60212.1| extracellular solute-binding protein family 3 [Acidovorax delafieldii 2AN] Length = 300 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 46/171 (26%), Positives = 74/171 (43%), Gaps = 10/171 (5%) Query: 30 IKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 IK+ G L+ G F+ + + +G +GFD + L+ I D K Q+ + + R Sbjct: 58 IKQAGTLRLGGTQTSNLFSLLNEKDGKIRGFDAGLAQLLTRYILGDGGKYQFTQVTSSTR 117 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGA 146 L + Q+D++ T R + A Y+ Q ++ K K I S + L+G Sbjct: 118 EQVLINDQVDMVFATYSITPARAEKISFAG---PYYTSQAGVLVKANNKTIQSYNDLAGK 174 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + QAG+T LA Y ++ F+ +E A R R DAY D Sbjct: 175 KVATQAGSTGPAILAQYAPKAVVQE----FQTHQEALDALRQGRVDAYITD 221 >gi|152970318|ref|YP_001335427.1| cysteine ABC transporter periplasmic substrate binding protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206576516|ref|YP_002238435.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Klebsiella pneumoniae 342] gi|238894802|ref|YP_002919536.1| cysteine ABC transport system periplasmic substrate-binding component [Klebsiella pneumoniae NTUH-K2044] gi|262044440|ref|ZP_06017501.1| amino acid ABC superfamily ATP binding cassette transporter [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|290509459|ref|ZP_06548830.1| polar amino acid transport system substrate-binding protein [Klebsiella sp. 1_1_55] gi|330010551|ref|ZP_08306784.1| ABC transporter, substrate-binding protein, family 3 [Klebsiella sp. MS 92-3] gi|150955167|gb|ABR77197.1| cysteine transport protein (ABC superfamily, peri_bind) [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206565574|gb|ACI07350.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Klebsiella pneumoniae 342] gi|238547118|dbj|BAH63469.1| cysteine ABC transport system periplasmic substrate-binding component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259038220|gb|EEW39430.1| amino acid ABC superfamily ATP binding cassette transporter [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|289778853|gb|EFD86850.1| polar amino acid transport system substrate-binding protein [Klebsiella sp. 1_1_55] gi|328534488|gb|EGF61076.1| ABC transporter, substrate-binding protein, family 3 [Klebsiella sp. MS 92-3] Length = 261 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 39/160 (24%), Positives = 71/160 (44%), Gaps = 9/160 (5%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K +++ L + + A L DI+KRG ++ + F V + +G+D+D Sbjct: 2 KKLLIALAGAACLLSSVSAAQADQLQDIEKRGVIRIAVPQDFPPFGSVGTDLQPQGYDID 61 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE--ISLGLAFRP 120 R L+ ++ K+Q +P+ + R LQ+ ++D++ + RE I A+ P Sbjct: 62 MARYLAKSM---KLKLQLVPVTSANRVPYLQTDKVDLVISSLGKNAEREKVIDFSRAYAP 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 +F G K + + LSG SI V G ++ L Sbjct: 119 --FF--LGVFGPKGAELKDAAALSGKSIGVTRGAVEDMVL 154 >gi|119387586|ref|YP_918620.1| extracellular solute-binding protein [Paracoccus denitrificans PD1222] gi|119378161|gb|ABL72924.1| amino acid ABC transporter substrate-binding protein, PAAT family [Paracoccus denitrificans PD1222] Length = 268 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 39/140 (27%), Positives = 63/140 (45%), Gaps = 7/140 (5%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L DI G L+C + + GFDVD+C L++A+ K + + Sbjct: 25 LDDIIASGTLRCAVVLDFPPMGMRDESNTPVGFDVDYCNDLAAAL---GVKAEIVETPFP 81 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ-GFIMHKKKGISSVSQLSG 145 ER AL S ++D+ +T TL R ++G++ I YF + + K GI+S + G Sbjct: 82 ERIPALMSGRVDVGVASTSDTLERAKTVGMS---IPYFAFEMAVTANDKSGIASFEDMKG 138 Query: 146 ASICVQAGTTTELTLADYFK 165 ++ AGT + L K Sbjct: 139 KTVGATAGTFEAIALEKQVK 158 >gi|182438660|ref|YP_001826379.1| putative ABC transporter solute-binding protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|178467176|dbj|BAG21696.1| putative ABC transporter solute-binding protein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 351 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 34/132 (25%), Positives = 65/132 (49%), Gaps = 10/132 (7%) Query: 30 IKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 IK+RG L G+ N+ G+ +A + +GFD+D RA++ + DP + + + + Sbjct: 91 IKQRGKLIAGVDQNSFRWGYRNPEAR-ELEGFDIDLVRAIAKDVLGDPDAVIFRAIPTNQ 149 Query: 88 RFLALQSKQIDILSRNT--DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV-SQLS 144 R AL++ ++D++ R + L ++S A+ + GQ + K I+ + L Sbjct: 150 RIAALENDRVDVVVRTMTINCKRLEQVSFSTAY----FQAGQQVLAPKGSTITGYDASLK 205 Query: 145 GASICVQAGTTT 156 G +C G+T Sbjct: 206 GKRVCSAEGSTA 217 >gi|17231622|ref|NP_488170.1| binding protein of ABC transporter component [Nostoc sp. PCC 7120] gi|17133265|dbj|BAB75829.1| binding protein of ABC transporter component [Nostoc sp. PCC 7120] Length = 301 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 49/250 (19%), Positives = 107/250 (42%), Gaps = 13/250 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 MYK+ +++ L + + A +++ + + G L G + + FA A G G+ Sbjct: 1 MYKNLAIALFSLTLTTVIPGAALAETVMQKVSRTGVLTAGTSKDAMPFAYTNAQGQLTGY 60 Query: 60 DVDFCRALSSAIFDDPSK---IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 VD + + + K ++ +PL +R + ++Q+DI+ + +T R+ + Sbjct: 61 SVDMLSEIKRHLEKELGKKIQLKLVPLTPAQRIPKIVNRQVDIVCDASSFTWERDKKVDF 120 Query: 117 AFRPITY-FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + ++Y G ++ + S L G I V A TT E + + Y Sbjct: 121 S---VSYGATGTQLLVKSGSNLGSPESLIGKRIGVLAQTTNEQAIKRVQPQAKLVY---- 173 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGD 234 + E A + + DA++ D L + P + I+PD S+ +A + + + Sbjct: 174 LKSRSEGYTALQEGKIDAFSSDSILLEGWLQRVENPDDFAIVPDRPYSREGIACMVPEDN 233 Query: 235 TEWYNIVSWT 244 +++ + V+++ Sbjct: 234 SKFLDAVNYS 243 >gi|54288345|gb|AAV31633.1| putative amino acid-binding protein [uncultured alpha proteobacterium EBAC2C11] Length = 261 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 6/156 (3%) Query: 6 FVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 +S L + L S NA L I G +K + F V A+G+ +G+DVD Sbjct: 4 ILSFLTALTLMIGPISFANAGDLSKILADGVVKIAVPESFAPFGSVGASGEHEGYDVDVA 63 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 + ++ D K++ +P+ +K+R L++ ++D++ R S+ + ++ Sbjct: 64 KLIAE---DLGVKLELVPVVSKQRIPFLETDRVDLVVSVMGANPKRAKSINFSSAYAPFY 120 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 G K +SS LSG ++ V GT +L L Sbjct: 121 SGA--FASSKIDVSSPGDLSGLTVGVTGGTLEDLEL 154 >gi|33602282|ref|NP_889842.1| solute-binding protein [Bordetella bronchiseptica RB50] gi|33576721|emb|CAE33799.1| probable solute-binding protein [Bordetella bronchiseptica RB50] Length = 272 Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 39/158 (24%), Positives = 72/158 (45%), Gaps = 7/158 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCG-INTGLVGFAEVKANGDWKGF 59 M K +++L + +L +A L DIK RG L CG + T + A G+ Sbjct: 1 MMKRNVLAVLTISLLGLAG-PAHADQLDDIKARGELLCGTLGTSQPFSYQDAATRTVVGY 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD C+ ++ + K+ Y L+ R L ++DIL+ N ++ E + +AF Sbjct: 60 DVDMCKLVADKL---GVKVNYKLLSVAARVPELNESRVDILAANLGYS--PERAEQIAFS 114 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157 Y Q ++ K + ++ ++G + G+++E Sbjct: 115 HTYYVSPQKLLVRKDSNLQTIESVNGRRVAATKGSSSE 152 >gi|225376815|ref|ZP_03754036.1| hypothetical protein ROSEINA2194_02457 [Roseburia inulinivorans DSM 16841] gi|225211311|gb|EEG93665.1| hypothetical protein ROSEINA2194_02457 [Roseburia inulinivorans DSM 16841] Length = 704 Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 55/244 (22%), Positives = 105/244 (43%), Gaps = 23/244 (9%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 ++ + ++F T FS D KK ++ G T + + E NG++ G+ VD+ R Sbjct: 8 YICLFLSTLMFLTVFSPVNCYARDGKK--VIRVGFYT-MDNYQECDENGNYSGYFVDYLR 64 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP--ITY 123 +S + +++ +N +L + ID++ D++ R +L + +P T+ Sbjct: 65 EISQYT---GWEYEFIQMNYSACLKSLNDRNIDLVC-GVDYSSFRTSTLDFSAQPAVTTH 120 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 ++ + + + G SI V A L DY AH+ + FE +++ Sbjct: 121 YELYALKDNDTYYYNDYADFDGMSIGVLASCKQLDALDDYADAHHFSFEKQYFENTAQLE 180 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 A + D A+YA +++ PSE IL + S PL +G+ I+ + Sbjct: 181 KALEDNTVD-------AIYATSVSH--PSEKKILASLPS-FPLYFVTFKGNP----IMEY 226 Query: 244 THYA 247 +YA Sbjct: 227 LNYA 230 >gi|284052353|ref|ZP_06382563.1| solute-binding family protein 3 [Arthrospira platensis str. Paraca] Length = 282 Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 26/98 (26%), Positives = 49/98 (50%), Gaps = 3/98 (3%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FD 73 FT + ++L I + G L+ G+ T V F+ + NGD +G+ VD R + + + Sbjct: 18 FTGVAGAETVLEQIGRTGVLRAGVRTDAVPFSYLNDNGDIEGYSVDLIRLIHGRLEEKLN 77 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 P +++ + ++RF +Q +D++ T T RE Sbjct: 78 QPIRLEMTTVTLQDRFDQVQQGNLDLVCEATSITAERE 115 >gi|220929055|ref|YP_002505964.1| ABC transporter [Clostridium cellulolyticum H10] gi|219999383|gb|ACL75984.1| ABC transporter related [Clostridium cellulolyticum H10] Length = 500 Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 47/231 (20%), Positives = 95/231 (41%), Gaps = 11/231 (4%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72 +F + S L +K+ + G+ N+ + F+E GFDVD ++++ + Sbjct: 242 MFMKKIFSQKSSLNSVKRANTINIGVVDNSPPMCFSE--DGNKLVGFDVDLAKSIAKRL- 298 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 + PL KER + + +ID + T R+ + + ++Y I+ Sbjct: 299 --NVSLNLQPLKNKERIEYILTNKIDACIAKLNHTKARDNLIDFS---VSYLQDCKKILM 353 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN-MKYHPIVFERVEEIDAAYRAHRC 191 K+ I +S+L+G I T+T + + ++F+ HN +K + I + E+ A + Sbjct: 354 YKENIGPISELAGKDIAYTIDTSTAMEIENFFEEHNWVKPNFIAYCSDEQAYNAMKHKLV 413 Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 Y D + P++ S + + D+EW N ++ Sbjct: 414 AGYASDEIIINHFINGEAERGNFQYHPEVCCYSYFCVGVSENDSEWLNEIN 464 >gi|186473553|ref|YP_001860895.1| extracellular solute-binding protein [Burkholderia phymatum STM815] gi|184195885|gb|ACC73849.1| extracellular solute-binding protein family 3 [Burkholderia phymatum STM815] Length = 302 Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 53/252 (21%), Positives = 93/252 (36%), Gaps = 6/252 (2%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V+ CL + L I+ + G V F+ V +N GF D C Sbjct: 13 VAAPCLTTTTGAAAQETQPTLAKIEAANLIAIGHRETSVPFSYVDSNNQVIGFSQDLCNR 72 Query: 67 LSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + A+ K ++++P+ ++ R +Q+ +D+ T T L +AF Sbjct: 73 IIDAVKVKTHKPNLQVRFIPVTSQNRISLVQNGTVDLECGVT--TNLTSRQNQVAFGDTF 130 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 + + K GI L+G ++ GTT+E L + M I + E Sbjct: 131 FVATTRLLTRKDSGIKDFPDLAGKTVVTNQGTTSERILRKMNEEKKMNMQIISAKDYGEG 190 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 R AY D L + +P++ VI+ S + +GD + IV Sbjct: 191 RMTLETGRAAAYMMDDVLLAGTRTLTAKPADWVIVGTPQSSEAYGFMLRKGDPAFLKIVD 250 Query: 243 WTHYAMVTAEEL 254 T ++ + E+ Sbjct: 251 DTLAQVMKSGEI 262 >gi|325062212|gb|ADY65902.1| amino acid ABC transporter, substrate binding protein [Agrobacterium sp. H13-3] Length = 268 Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 13/163 (7%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK---GFDVDF 63 V + L+ F A L DI G L+C + ++ F + A D GFDVD+ Sbjct: 5 VIVAGLLAATFAITPAKADKLDDIISSGTLRCAV---VLDFPPMGARDDANNPIGFDVDY 61 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 C L+ A+ ++I P ER AL S ++D+ +T TL R ++G+ + Y Sbjct: 62 CNDLAKAL-GVTAEIVETPF--PERIPALMSGRVDVGVASTSDTLERAKTVGMT---VPY 115 Query: 124 FDGQ-GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165 F + + K G+ S + G ++ AGT + L K Sbjct: 116 FAFEMAVTANDKSGVKSFEDMKGKTVGATAGTFEAIALEKTVK 158 >gi|148269469|ref|YP_001243929.1| extracellular solute-binding protein [Thermotoga petrophila RKU-1] gi|147735013|gb|ABQ46353.1| extracellular solute-binding protein, family 3 [Thermotoga petrophila RKU-1] Length = 246 Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 53/222 (23%), Positives = 98/222 (44%), Gaps = 23/222 (10%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 + +IK RG+L G++ F V NG+ GFDVD + ++ + +++ + + Sbjct: 21 IDEIKSRGYLLVGLSADFPPFEFVDENGNIAGFDVDLAKEIARRL---GVELKIVDMTFD 77 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD-GQGFIMHKKKGI--SSVSQL 143 +L +K+ID++ + T+ E +AF YFD GQ ++ K + L Sbjct: 78 GLIPSLLTKKIDVII--SGMTITEERKKVVAFSD-PYFDAGQVIVVRKDSDFRPKTYEDL 134 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY---RAHRCDAYTGDISA 200 G ++ VQ GTT ++ ++ KY I R ++ A+ + R DA D + Sbjct: 135 VGKTVAVQIGTTGDIEVS--------KYEGIKVVRFDKFTDAFLELKRGRADAVVLDSAT 186 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A N + VI ++S A+ + DT+ ++ Sbjct: 187 ARAFVAKN---PDLVISSGVLSSEQYGIAVRKEDTDLLEFIN 225 >gi|317509500|ref|ZP_07967113.1| extracellular solute-binding protein, family 3 [Segniliparus rugosus ATCC BAA-974] gi|316252204|gb|EFV11661.1| extracellular solute-binding protein, family 3 [Segniliparus rugosus ATCC BAA-974] Length = 335 Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 8/135 (5%) Query: 27 LGDIKKRGFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L I RG L G++ G F+ A G+ KGFDV R ++ + DPS+++Y +++ Sbjct: 82 LDRILARGRLVVGLDQGTYPFSYRDTATGEMKGFDVAMAREIAGGMLGDPSRVEYRIISS 141 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG----ISSVS 141 R AL++ +D++ + T R + + YF+ +M + Sbjct: 142 AGRTTALENDTVDLVVKTMSITCERAKDVTFSE---PYFETDQRVMAATNANATSFTDRK 198 Query: 142 QLSGASICVQAGTTT 156 L +++C GTT+ Sbjct: 199 ILGESTVCAARGTTS 213 >gi|229816604|ref|ZP_04446902.1| hypothetical protein COLINT_03661 [Collinsella intestinalis DSM 13280] gi|229807810|gb|EEP43614.1| hypothetical protein COLINT_03661 [Collinsella intestinalis DSM 13280] Length = 318 Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 45/191 (23%), Positives = 80/191 (41%), Gaps = 12/191 (6%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFD---DPS 76 S S L IK RG L G+ + G+ A + G ++D C +++A+FD D + Sbjct: 71 SAPGSKLAAIKARGKLNAGVKKDVPGYGYYDPAARTYAGMEIDLCYQIAAAVFDVTYDEA 130 Query: 77 K----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 + + + + K R + + Q+D++ +T+ E F D G ++ Sbjct: 131 RERELVSFTDVTPKTRGPLIDNDQLDVVCAT--YTITPERIESWDFSTPYRTDYVGLMVK 188 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP--IVFERVEEIDAAYRAHR 190 K+ G + ++ L G I V G TT+ + K + P + F I ++ A Sbjct: 189 KRSGFTRIADLDGRIIGVSQGATTQGLIEQMLKDEGIDARPEFLAFSGYPIIKSSLDAGN 248 Query: 191 CDAYTGDISAL 201 D + D S L Sbjct: 249 IDCFAMDRSTL 259 >gi|326779309|ref|ZP_08238574.1| ABC-type transporter, periplasmic subunit family 3 [Streptomyces cf. griseus XylebKG-1] gi|326659642|gb|EGE44488.1| ABC-type transporter, periplasmic subunit family 3 [Streptomyces cf. griseus XylebKG-1] Length = 346 Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 34/132 (25%), Positives = 65/132 (49%), Gaps = 10/132 (7%) Query: 30 IKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 IK+RG L G+ N+ G+ +A + +GFD+D RA++ + DP + + + + Sbjct: 86 IKQRGKLIAGVDQNSFRWGYRNPEAR-ELEGFDIDLVRAIAKDVLGDPDAVIFRAIPTNQ 144 Query: 88 RFLALQSKQIDILSRNT--DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV-SQLS 144 R AL++ ++D++ R + L ++S A+ + GQ + K I+ + L Sbjct: 145 RIAALENDRVDVVVRTMTINCKRLEQVSFSTAY----FQAGQQVLAPKGSTITGYDASLK 200 Query: 145 GASICVQAGTTT 156 G +C G+T Sbjct: 201 GKRVCSAEGSTA 212 >gi|300697251|ref|YP_003747912.1| high affinity periplasmic solute-binding protein; high affinity transporter [Ralstonia solanacearum CFBP2957] gi|299073975|emb|CBJ53512.1| high affinity periplasmic solute-binding protein; high affinity transport system [Ralstonia solanacearum CFBP2957] Length = 263 Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 49/176 (27%), Positives = 75/176 (42%), Gaps = 16/176 (9%) Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GF+VD +AL + + +Q P N R LQ ++D+L + L E + LA Sbjct: 48 GFNVDLAQALGRGLGVEVETVQVQPSN---RIQFLQQGRVDVLVAAME--LNPERAELLA 102 Query: 118 FRPITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 P Y+ G ++ K + S L G +C+ G++ LA A P F Sbjct: 103 HVPTPYYRVGGVALVPKDSPVRQWSDLKGKDVCLSQGSSYTRPLAAEIGA-----TPKGF 157 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH-VILPDIISKSPLAPAII 231 + E A R + C A D + L L TN ++ V+ PD+I AP +I Sbjct: 158 KSPAESLLALRGNNCAAAVHDATLLQPLPRTNPEWKDYRVVGPDLIP----APTVI 209 >gi|300715445|ref|YP_003740248.1| Cysteine transport protein [Erwinia billingiae Eb661] gi|299061281|emb|CAX58390.1| Cysteine transport protein [Erwinia billingiae Eb661] Length = 261 Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 38/162 (23%), Positives = 72/162 (44%), Gaps = 9/162 (5%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K ++++ ++ A L DI+KRG L+ + F V + +G+D+D Sbjct: 2 KKALLAMVGAALMLTQVTQAMADQLQDIEKRGVLRVAVPQDFPPFGSVGTDLQPQGYDID 61 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE--ISLGLAFRP 120 + L+ + K+Q +P+ + R LQ+ ++D++ + RE I+ A+ P Sbjct: 62 MAKYLAKQM---KLKLQLVPVTSANRVPYLQTDKVDLVISSMGKNPEREKVIAFSRAYAP 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162 +F G K + + LSG +I V G ++ L D Sbjct: 119 --FF--LGVFGPKDAQLKDAAALSGKTIGVTRGAVEDMVLTD 156 >gi|239813330|ref|YP_002942240.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] gi|239799907|gb|ACS16974.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] Length = 301 Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 42/176 (23%), Positives = 73/176 (41%), Gaps = 3/176 (1%) Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 AN + G+ V+ C + I +K++Y+ + A+ +Q+ +DI T R+ Sbjct: 58 ANEKYVGYHVELCERVLKDIAPQ-AKLEYMAVTAQNTIPLVQNGTLDIGCGPTTNNTARQ 116 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 + A TY GISS+ QL+G ++ GTT L +A N Sbjct: 117 QQVAFAL--TTYVSEVRMATRVDSGISSLDQLAGRTVSASTGTTAVQLLRKRERAQNTTI 174 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 ++ + E + R DA+ D + L + PS + I+ D + P+A Sbjct: 175 TTMLGKDHLESFLLMESGRADAFVLDDNLLAGIIANAKNPSAYRIVGDALGSEPIA 230 >gi|194466983|ref|ZP_03072970.1| extracellular solute-binding protein family 3 [Lactobacillus reuteri 100-23] gi|194454019|gb|EDX42916.1| extracellular solute-binding protein family 3 [Lactobacillus reuteri 100-23] Length = 276 Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 47/206 (22%), Positives = 89/206 (43%), Gaps = 14/206 (6%) Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 +T L G ++ G +GF++D A++ I K ++P+ + R L++ ID + Sbjct: 50 DTRLFGLENIRT-GKLEGFEIDLATAITKKILGPQGKPIFVPVTSGTRVPLLKNGNIDAI 108 Query: 101 SRNTDWTLLREISLGLAFRPITYFD-GQGFIMHKKKGISSVSQLS--GASICVQAGTTTE 157 T RE + +YFD GQ ++ K I +++ L+ GA I +G+ + Sbjct: 109 MATMTITPEREKQVDFTH---SYFDAGQSLLVRKGSPIKNINDLNRRGAVILGVSGSNSV 165 Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 +A + K + + A ++ + DA T D LY + N P V+ Sbjct: 166 KNVARFAP----KARVLQLSDYAQAMTALKSKQGDALTTDNGILYGMAAEN--PGYEVVG 219 Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSW 243 + +K P A+ + + N ++W Sbjct: 220 GN-FTKEPYGIAVNKNQARFRNKLNW 244 >gi|51244843|ref|YP_064727.1| glutamine ABC transporter, periplasmic substrate binding protein [Desulfotalea psychrophila LSv54] gi|50875880|emb|CAG35720.1| probable glutamine ABC transporter, periplasmic substrate binding protein [Desulfotalea psychrophila LSv54] Length = 284 Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 53/227 (23%), Positives = 99/227 (43%), Gaps = 18/227 (7%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 + +S L I K G L+ G+N F G GFDV+ + ++ ++ K++++ Sbjct: 39 SKSSSLNTIVKNGELRIGLNASYPPFEMTNKQGRLIGFDVELGKEIAKSM---GVKVKFV 95 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI--MHKKKGISS 139 ++ AL S + D++ + TL ++ +L +AF GQG + M K+K I Sbjct: 96 NMDFDGLIPALLSDKFDLII--SGMTLTQQRNLKIAFSNPYVLMGQGIMVNMSKEKDIRL 153 Query: 140 VSQLSGASICVQA--GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 L+ + + + GTT E Y K + +E+ + R DA+ D Sbjct: 154 YRNLNKPEMKIVSCIGTTGEEAARKYLPKAQYKSFDQPSDSAQEVISG----RADAFVYD 209 Query: 198 ISALYAL--KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + L L ++ D+ +L + + P+A QGD + N ++ Sbjct: 210 LHVLEVLQKRMGGDK---TFLLKEPFTFEPMAIGFKQGDPDLTNFIN 253 >gi|257460304|ref|ZP_05625407.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] gi|257442369|gb|EEV17509.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] Length = 262 Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 41/146 (28%), Positives = 70/146 (47%), Gaps = 10/146 (6%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V +L ++L F S A+ L IKK ++ G+ F+ + +G ++GF++ Sbjct: 3 VFVLAALLLGFLS----ANSLDQIKKDRLVRIGVYNDQPPFSAL-VDGKYRGFEIALGEK 57 Query: 67 LSSAIF-DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 L IF D+P K++++P+ A R ALQ + D++ T R + + P YF Sbjct: 58 LGKEIFGDNPGKVKFIPITASRRISALQRNEADMVIATFTPTPARAKKVDFS-EP--YFK 114 Query: 126 GQ-GFIMHKKKGISSVSQLSGASICV 150 Q G + K + ++S QL I V Sbjct: 115 VQVGVLAKKDENVTSFDQLRKKRIFV 140 >gi|157145937|ref|YP_001453256.1| hypothetical protein CKO_01690 [Citrobacter koseri ATCC BAA-895] gi|157083142|gb|ABV12820.1| hypothetical protein CKO_01690 [Citrobacter koseri ATCC BAA-895] Length = 277 Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 58/239 (24%), Positives = 94/239 (39%), Gaps = 14/239 (5%) Query: 8 SILCLIILF---FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDF 63 ++L L LF + A L DIK G +K F V G+DVDF Sbjct: 12 TLLALSALFASGIAALPAQADQLADIKAAGVVKVATFDANPPFGSVDPQTHKIVGYDVDF 71 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 AL+ ++ K++ + N R LQS + D++ D T+ E + + F + Sbjct: 72 AEALAKSLG---VKLELVATNPANRIPLLQSGKADLIV--ADITITPERAQVIDFSVPYF 126 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 GQ F++ + + S A I GTT E L F + + ++ + Sbjct: 127 ITGQQFLVPATSP-DKLDEYSRARIGAVKGTTGEQALHQRFPQSRV----LAYDDIPLAL 181 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A R A T D + L L + ILPD++SK + + +G+ V+ Sbjct: 182 TALRNGNVQAITQDSTILAGLLSGAPDKANFKILPDLLSKEEIGVGVKKGEPALLKAVN 240 >gi|312797284|ref|YP_004030206.1| glutamate/aspartate-binding protein [Burkholderia rhizoxinica HKI 454] gi|312169059|emb|CBW76062.1| Glutamate/aspartate-binding protein [Burkholderia rhizoxinica HKI 454] Length = 297 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 49/219 (22%), Positives = 86/219 (39%), Gaps = 6/219 (2%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQYLP 82 L IK G + G + F+ + G+ + + A+ P K++ +P Sbjct: 28 LKKIKDSGVIALGHRESSIPFSYYDEKQNVVGYSQELALKIVEAVKHELKTPDLKVKLIP 87 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R +Q+ IDI +T L R+ AF + G + K GI + Sbjct: 88 ITSQNRIPLVQNGTIDIECGSTTNNLDRQKQA--AFSNTIFVVGTRLMTKKDSGIKDFAD 145 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G ++ AGTT+E L + HNM + I + E R A+ D + L Sbjct: 146 LKGKTVVTTAGTTSERLLRKLNQDHNMGMNIISAKDHGESFLTLSTGRAAAFMMDDALLA 205 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + + P + VI+ S + +GD + +V Sbjct: 206 GERAKSSHPGDFVIVGTPQSHEAYGCMMRKGDPAFKKVV 244 >gi|15890315|ref|NP_355987.1| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|15158518|gb|AAK88772.1| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 268 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 13/163 (7%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK---GFDVDF 63 V + L+ F+ A L DI G L+C + ++ F + A D GFDVD+ Sbjct: 5 VIVAGLLAATFSLTPAKADKLDDIISSGTLRCAV---VLDFPPMGARDDANNPVGFDVDY 61 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 C L+ + ++I P ER AL S ++D+ +T TL R ++G+ + Y Sbjct: 62 CNDLAK-VLGVTAEIVETPF--PERIPALMSGRVDVGVASTSDTLERAKTVGMT---VPY 115 Query: 124 FDGQ-GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165 F + + K GI S + G ++ AGT + L K Sbjct: 116 FAFEMAVTANDKSGIKSFEDMKGKTVGATAGTFEAIALEKTVK 158 >gi|313885660|ref|ZP_07819409.1| ABC transporter glutamine-binding protein GlnH [Eremococcus coleocola ACS-139-V-Col8] gi|312619025|gb|EFR30465.1| ABC transporter glutamine-binding protein GlnH [Eremococcus coleocola ACS-139-V-Col8] Length = 278 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 49/214 (22%), Positives = 97/214 (45%), Gaps = 21/214 (9%) Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 +T L GF ++ NG+ +GFD+D + L+ + D +++ + +K R L++ ID Sbjct: 57 DTKLFGFYNIE-NGEIEGFDIDVAKELTKRLTGDSKHAKFVEVTSKTRIPLLRNGNID-- 113 Query: 101 SRNTDWTLLREISLGLAFRPI-----TYFD-GQGFIMHKKKGISSVSQLSGASICVQAGT 154 ++ +++ A + + TYFD GQ ++ K I+S+ L ++ V Sbjct: 114 ------AIIATMTINEARKKVVDFTDTYFDAGQSLLVAKDSKINSIDNLDASTTVVSVKG 167 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 +T + K + I E E A +A + DA T D + L L L ++ P + Sbjct: 168 STS---SQNIKKLAPQAKLIELETYAEGLTALKAGQGDALTTDNAIL--LGLISENP-DF 221 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 + + ++ P A+ + ++ N ++ AM Sbjct: 222 RLAGENFTEEPYGIAVNKNQADFKNQLNQALAAM 255 >gi|187922932|ref|YP_001894574.1| extracellular solute-binding protein family 3 [Burkholderia phytofirmans PsJN] gi|187714126|gb|ACD15350.1| extracellular solute-binding protein family 3 [Burkholderia phytofirmans PsJN] Length = 267 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 38/160 (23%), Positives = 74/160 (46%), Gaps = 9/160 (5%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + + ++L +L + + +A L +I K G LK + F V A+ +G+D+D Sbjct: 11 RAWLAALLLSPVLAVNAPAAHADTLDNIAKAGVLKVAVPEDYPPFGSVGADMKPQGYDID 70 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE--ISLGLAFRP 120 L+ ++ K++ +P+N+ R LQ+ ++D++ + T RE I A+ P Sbjct: 71 TAALLAKSMN---VKLELVPVNSANRIPYLQTGKVDLVISSLGKTPDREKVIDFSTAYAP 127 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 Y+ QG +S + L+G ++ G E+ L Sbjct: 128 --YY--QGVFGPADIKVSGPADLTGKTVGATRGALEEIGL 163 >gi|295681020|ref|YP_003609594.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] gi|295440915|gb|ADG20083.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] Length = 266 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 49/197 (24%), Positives = 87/197 (44%), Gaps = 14/197 (7%) Query: 5 FFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 ++ L + FT+ + +A +L +K+ G LK G+ F +G +GFDVD Sbjct: 6 LLINALAISAFSFTAVAAHAEDLLDSVKQAGVLKIGLEGTYPPFDSRNKDGQLEGFDVDV 65 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 +A+++ + P +++P ALQS + D++ T R+ L + +P TY Sbjct: 66 AKAVAAKLGVKP---EFIPTEWSGIIAALQSGKFDVIINQVTITPQRKQVLDFS-QPYTY 121 Query: 124 FDGQGFIMH--KKKGISSVSQLSG-ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Q I K+ S+ + G I V GT + +A N++ +P E++ Sbjct: 122 SAAQ-LIQRADDKREFKSLDEFKGDKKIGVTLGTNYD-QMARAVPGINVQTYPGAPEKLR 179 Query: 181 EIDAAYRAHRCDAYTGD 197 ++ A R DA D Sbjct: 180 DL----AAKRIDATIDD 192 >gi|315640804|ref|ZP_07895904.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus italicus DSM 15952] gi|315483416|gb|EFU73912.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus italicus DSM 15952] Length = 268 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 48/204 (23%), Positives = 90/204 (44%), Gaps = 13/204 (6%) Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 +T L G ++ + + KGFD+D +A++ I ++ + +K R L++ ID + Sbjct: 47 DTKLFGLMDISSR-EVKGFDIDIAKAITEEILGRDGNAVFVEVTSKTRIPLLKNGNIDAI 105 Query: 101 SRNTDWTLLREISLGLAFRPITYFD-GQGFIMHKKKGISSVSQLSGA-SICVQAGTTTEL 158 T+ E + F + YFD GQ ++ K I++V L+ ++ V G+T+ Sbjct: 106 IAT--MTITDERKKQVDFSDV-YFDAGQSLLVAKGSPITNVKDLTANDTVLVVKGSTS-- 160 Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218 AD + + E E A +A + DA + D + L + ND + ++ Sbjct: 161 --ADNIRKAAPDVKVLEMENYSEAFTALQAGQGDAVSTDNAILLGMASENDN---YTLVG 215 Query: 219 DIISKSPLAPAIIQGDTEWYNIVS 242 + P AI +G + N V+ Sbjct: 216 GTFTNEPYGIAINKGQESFLNAVN 239 >gi|254239636|ref|ZP_04932958.1| hypothetical protein PA2G_00253 [Pseudomonas aeruginosa 2192] gi|126193014|gb|EAZ57077.1| hypothetical protein PA2G_00253 [Pseudomonas aeruginosa 2192] Length = 273 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 43/145 (29%), Positives = 67/145 (46%), Gaps = 7/145 (4%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 A L DI + G L+C + A + GFDVD+C L+ A+ D ++I P Sbjct: 24 QADKLDDIIESGKLRCAVTLDFPPMGSRDAQNNPVGFDVDYCNDLAKAL-DVKAEIVETP 82 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVS 141 +R AL S + D++ +T TL R ++G++ I YF ++ ++ I+S Sbjct: 83 F--PDRIPALVSGRADVIVASTSDTLERAKTIGMS---IPYFAFVKVVLTREDTSIASYE 137 Query: 142 QLSGASICVQAGTTTELTLADYFKA 166 L G + AGT L L KA Sbjct: 138 DLKGRPVGGTAGTFEALALEKDSKA 162 >gi|242240518|ref|YP_002988699.1| extracellular solute-binding protein family 3 [Dickeya dadantii Ech703] gi|242132575|gb|ACS86877.1| extracellular solute-binding protein family 3 [Dickeya dadantii Ech703] Length = 278 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 34/131 (25%), Positives = 59/131 (45%), Gaps = 5/131 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L ++ +RG L+ G F NG G+DVD +AL+ A+ K++ + Sbjct: 40 SALQNVLQRGTLRVGDCLSFAPFGFYDKNGAPDGYDVDLAKALAKAM---GVKLEMVNTT 96 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 + R LQ+ ++D++ N L R +G F + ++ K GI S ++ Sbjct: 97 SANRIPNLQTNKVDVVFCNFTRNLERAKEIG--FTNPYVVASEAMLVRKNSGIQSAHDMA 154 Query: 145 GASICVQAGTT 155 G +I G+T Sbjct: 155 GKTIATVKGST 165 >gi|328886196|emb|CCA59435.1| Glutamate-binding protein of ABC transporter system [Streptomyces venezuelae ATCC 10712] Length = 305 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 5/144 (3%) Query: 31 KKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 KKRG L G E A G + GFD++ + +++++ DP+ I + + + R Sbjct: 61 KKRGHLVVGAKEDQPYMGERDPATGRYSGFDIEIAKMMAASLGFDPAGISFRTIASANRE 120 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASI 148 ALQ+ QID R+ +G A Y GQ ++ + I L+G + Sbjct: 121 TALQNGQIDYYVGTYTINDNRKKLVGFAG--PYYLAGQSLLVRTDENDIHGPQDLAGKRV 178 Query: 149 CVQAGTTT-ELTLADYFKAHNMKY 171 C AG+T + DY KA + Y Sbjct: 179 CSAAGSTPYQRIQKDYPKAELVAY 202 >gi|134093508|ref|YP_001098583.1| glutamate/aspartate periplasmic binding protein ABC transporter [Herminiimonas arsenicoxydans] gi|133737411|emb|CAL60454.1| Glutamate/aspartate periplasmic binding protein precursor [Herminiimonas arsenicoxydans] Length = 300 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 54/233 (23%), Positives = 106/233 (45%), Gaps = 8/233 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD---PS-KIQYLP 82 L IK+ G + G + F+ + G+ +D C + + D P+ K++ P Sbjct: 32 LKKIKETGEITIGYRESSIPFSFLDDKQQPIGYAMDLCMKIVGTVKADLKLPALKVKLQP 91 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + + R L + ID+ +T ++ R+ + AF P + + K I++++Q Sbjct: 92 VTSSNRIPLLNNGTIDLECGSTTNSIARQEQV--AFGPTYFVINVTAAVKKSSNINTIAQ 149 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G ++ +GTT+ L Y KA N + I + E R A+ D L Sbjct: 150 LDGKTVSTTSGTTSVPLLKAYKKAGNAQVKEIYGKDHAEAFLLMADDRAAAFVMD-DILL 208 Query: 203 ALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 A ++ N RP ++ ILP+ + + P + + +GD ++ +V + A++ + E+ Sbjct: 209 AGQIANAKRPGDYKILPESLRQEPYSMMLRKGDPQFKALVDKSITAVMQSGEI 261 >gi|330862548|emb|CBX72703.1| hypothetical protein YEW_JG40510 [Yersinia enterocolitica W22703] Length = 193 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 32/160 (20%), Positives = 73/160 (45%), Gaps = 5/160 (3%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K +++L +++ + + A L I++RG L+ + F V + +G+D+D Sbjct: 4 KKRMLALLGAVLILVQAPAVLADQLEKIQQRGVLRVAVPQDFPPFGSVGTDLQPQGYDID 63 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 L+ + K+Q +P+ + R LQ+ ++D++ + RE ++ + Sbjct: 64 MAHYLADKM---KLKLQLVPVTSANRVPYLQTDKVDLVISSLGKNPEREKAIAFSRAYAP 120 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162 +F G K+ + QL+G ++ V G ++ L++ Sbjct: 121 FF--LGVFGAKEDALKQPEQLAGKTVGVTRGAVEDMVLSE 158 >gi|49474411|ref|YP_032453.1| amino-acid ABC transporter binding protein [Bartonella quintana str. Toulouse] gi|49239915|emb|CAF26313.1| Amino-acid ABC transporter binding protein [Bartonella quintana str. Toulouse] Length = 303 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 53/210 (25%), Positives = 90/210 (42%), Gaps = 18/210 (8%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD-------PSKIQ 79 L IKK G + G+ G A NG + GF + ++ I DD P KI Sbjct: 29 LEKIKKTGEITLGVRES-SGLAYALGNGKYVGFHTE----MAERIIDDISKKIGKPVKIH 83 Query: 80 YLPLNAKERFLALQSKQIDIL--SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 YLP+ ++ R L++ D S D + +E AF TY + + K I Sbjct: 84 YLPITSQNRIPLLKNSTYDFECGSTTNDVSSSKE----AAFAYTTYVEDVRIAVKKNSNI 139 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 S L+G ++ GTT+ + ++ N+ ++ + + + + R DA+ D Sbjct: 140 KSFDDLNGKTVATTTGTTSVQIIRKNQRSKNINFNVVKGKDHGDSFLLLESGRADAFIMD 199 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLA 227 S L + PS+++IL ++S P+A Sbjct: 200 ASILAGHIAKSKNPSDYIILDTVLSVEPIA 229 >gi|330904270|gb|EGH34842.1| extracellular solute-binding protein [Pseudomonas syringae pv. japonica str. M301072PT] Length = 71 Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 20/47 (42%), Positives = 31/47 (65%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70 + L IKK+GF++CG++ GL GF+ + G G D D CRA+++A Sbjct: 25 GTTLDAIKKKGFIQCGVSDGLPGFSVPDSTGKITGIDADVCRAVAAA 71 >gi|116695743|ref|YP_841319.1| ABC transporter periplasmic protein [Ralstonia eutropha H16] gi|113530242|emb|CAJ96589.1| ABC-type transporter, periplasmic component: PAAT family [Ralstonia eutropha H16] Length = 267 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 38/152 (25%), Positives = 68/152 (44%), Gaps = 5/152 (3%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 +L L++L +F+ A + +I K+G + G+ TG F A G G+DVD L Sbjct: 14 VLTLLVLTSAAFTAQAQTVAEIVKKGRVTIGVVTGAPPFGTTDATGKPAGYDVDVANLLG 73 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 + + +PL + R AL++ ++D L T R ++ + P + F+ Sbjct: 74 KYLG---VPVDIVPLTSPSRIPALEAGKVDFLVATLAPTPERARAIMFS-APYSAFELTI 129 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 F K + +++L + V GTT + L Sbjct: 130 FAPVAAK-YARLTELGKKKVGVTRGTTQDTAL 160 >gi|317401748|gb|EFV82367.1| extracellular solute-binding protein family 3 [Achromobacter xylosoxidans C54] Length = 260 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 36/151 (23%), Positives = 69/151 (45%), Gaps = 5/151 (3%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 LC + T+A L DI KRG LK + F V A+ G+D+D ++ Sbjct: 10 LCTAATLLAAPLTHADTLDDIVKRGTLKVAVPQDFPPFGSVGADMKPLGYDIDTAALIAK 69 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 + K++ +P+ + R LQ++++D++ + RE ++ + +F+G Sbjct: 70 QLG---VKLELVPVTSANRVPYLQTRKVDLVISSLGKNPEREKAIDFSDAYAPFFNGVFG 126 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTL 160 K ++S + L+G +I V G ++ L Sbjct: 127 PADVK--VASAADLAGKTIGVTRGAVEDIEL 155 >gi|323498511|ref|ZP_08103504.1| hypothetical protein VISI1226_09569 [Vibrio sinaloensis DSM 21326] gi|323316400|gb|EGA69418.1| hypothetical protein VISI1226_09569 [Vibrio sinaloensis DSM 21326] Length = 262 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 54/225 (24%), Positives = 97/225 (43%), Gaps = 23/225 (10%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 IL DIK G LK ++G + F NG + GFD+D + ++ AI ++Y+P+N Sbjct: 23 ILDDIKSSGELKVCFDSGYMPFEMTAKNGQYIGFDIDLGKQMARAI-----GVKYVPVNT 77 Query: 86 KERFL--ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSVS 141 + L + + ++ T R I + A + GQ ++ K I+ Sbjct: 78 AWDGIIPTLLTGKCHMIMGGMTITPKRNIQVNFADPYVVI--GQSILLDPKHEGKITDYR 135 Query: 142 QLSGASICV--QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI- 198 L+ A V + GTT E + Y + + E V E+ + DA+ D+ Sbjct: 136 DLNSAEFVVATKLGTTGEQAIKRYLPKAKVNLYETQSEAVLEVANG----KVDAFIYDLP 191 Query: 199 -SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 +A+Y+ + + V L + + PL A+ QG+ + N ++ Sbjct: 192 FNAIYSA----ENKGQLVHLAEPFTYEPLGWAVPQGNPDTINFLN 232 >gi|260776933|ref|ZP_05885827.1| polar amino acid uptake family ABC transporter substrate-binding protein [Vibrio coralliilyticus ATCC BAA-450] gi|260606599|gb|EEX32873.1| polar amino acid uptake family ABC transporter substrate-binding protein [Vibrio coralliilyticus ATCC BAA-450] Length = 518 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 40/199 (20%), Positives = 80/199 (40%), Gaps = 10/199 (5%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 F ++L L S +L IK+ G + G+ + + +N GF+ D + Sbjct: 4 FFTLLISCCLLLPSVQAQ-DLLSKIKQSGRIVIGVKADYPPWGMLDSNNQPAGFEPDLAQ 62 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 + A+ +++++ + + RF L Q+D+L ++ R + + P + Sbjct: 63 MIGHAL---NAEVEFKTVTSANRFQKLNEGQVDMLIATVGDSMQRRQRVRM-ITPHYFRS 118 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 G + HK + + L G +C+ AG +L N + PI+ + A Sbjct: 119 GVTALTHKSNSVEKWTDLIGKPVCLTAGAYFNKSL-----VQNYRIKPIILMSNRDSKLA 173 Query: 186 YRAHRCDAYTGDISALYAL 204 ++C A+ D L+ L Sbjct: 174 LLTNKCQAWAYDSGILFHL 192 >gi|207724367|ref|YP_002254764.1| amino-acid-binding periplasmic protein [Ralstonia solanacearum MolK2] gi|206589585|emb|CAQ36546.1| amino-acid-binding periplasmic protein [Ralstonia solanacearum MolK2] Length = 290 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 49/176 (27%), Positives = 75/176 (42%), Gaps = 16/176 (9%) Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GF+VD +AL + + +Q P N R LQ ++D+L + L E + LA Sbjct: 75 GFNVDLAQALGRGLGVEVETVQVQPSN---RIQLLQQGRVDLLVAAME--LNPERAELLA 129 Query: 118 FRPITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 P Y+ G ++ K + S L G +C+ G++ LA A P F Sbjct: 130 HVPTPYYRVGGVALVPKDSPVRQWSDLKGKDVCLSQGSSYTRPLAAEIGA-----TPKGF 184 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH-VILPDIISKSPLAPAII 231 + E A R + C A D + L L TN ++ V+ PD+I AP +I Sbjct: 185 KSPAESLLALRGNNCVAAVHDATLLQPLPRTNPEWKDYRVVGPDLIP----APTVI 236 >gi|160901198|ref|YP_001566780.1| extracellular solute-binding protein [Delftia acidovorans SPH-1] gi|160366782|gb|ABX38395.1| extracellular solute-binding protein family 3 [Delftia acidovorans SPH-1] Length = 272 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 54/217 (24%), Positives = 82/217 (37%), Gaps = 40/217 (18%) Query: 30 IKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 IK+RG + G+ F + G++V ++ + +Q P N R Sbjct: 28 IKQRGKIVVGVMLSGPPFGTIDPVTQRHVGYNVQLSEGVAKGLGVGVETVQVQPSN---R 84 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD-GQGFIMHKKKGISSVSQLSGAS 147 LQ ++DIL N WT +E S L+F P + + G I K G+ L G Sbjct: 85 VQFLQQGKVDILIANMQWT--QERSEILSFVPTPFEEVGGAAIAKKSSGVRQWDDLRGKP 142 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 +CV G+ LAD + A + A+ G +L ALK Sbjct: 143 VCVSQGSNFTKPLADQYGA-----------------------QIKAFRGQPESLLALKGG 179 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEW--YNIVS 242 N + HV SP ++ + +W Y IVS Sbjct: 180 NCAAAVHV--------SPTLRELVASNADWKDYEIVS 208 >gi|199599083|ref|ZP_03212489.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus rhamnosus HN001] gi|258509003|ref|YP_003171754.1| ABC transporter amino acid-binding periplasmic protein [Lactobacillus rhamnosus GG] gi|199590046|gb|EDY98146.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus rhamnosus HN001] gi|257148930|emb|CAR87903.1| ABC transporter, amino acid-binding periplasmic protein [Lactobacillus rhamnosus GG] gi|259650296|dbj|BAI42458.1| amino acid ABC transporter substrate binding component [Lactobacillus rhamnosus GG] Length = 274 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 52/215 (24%), Positives = 86/215 (40%), Gaps = 35/215 (16%) Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 +T L G +K G +GFDVD +A++ I Q + + + R ++ +D + Sbjct: 50 DTRLFGLMNIKT-GKIEGFDVDMAKAITKQILGKKGNAQLVQVTSDTRVPMIKGGNLDAV 108 Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS--ICVQ------- 151 T+ E L F + + GQ ++ K I SV L + I VQ Sbjct: 109 IAT--MTITPERQKILDFSDVYFNAGQSLLVKKGSPIKSVKDLKKGTKVIGVQGSNSVDN 166 Query: 152 ----AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 A TT L LADY +A A ++ + DA T D LY + Sbjct: 167 VKKAAPDTTVLQLADYAQAF----------------TALKSGQGDALTTDNGILYGM--- 207 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 +++ +++ +K P AI +G + N V+ Sbjct: 208 SEQDKNYIVTGGTFTKEPYGIAINKGQKPFVNAVN 242 >gi|110347169|ref|YP_665987.1| extracellular solute-binding protein [Mesorhizobium sp. BNC1] gi|110283280|gb|ABG61340.1| amino acid ABC transporter substrate-binding protein, PAAT family [Chelativorans sp. BNC1] Length = 303 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 60/266 (22%), Positives = 103/266 (38%), Gaps = 14/266 (5%) Query: 10 LCLIILFFTSFSTNAS------ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 LC + T+ AS L IK G + G V F+ + G+ VD Sbjct: 5 LCAFAVVMTAMCGGASADDLTGTLKKIKDTGVITVGNRDSSVPFSYLDDKQQPVGYAVDI 64 Query: 64 CRALSSAIFD----DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 C + A+ + D ++++ P+ + R + + +D+ +T T R+ + AF Sbjct: 65 CLKVVDAVKERLKLDKLEVRFNPVTSATRIPLIANGTVDLECGSTFNTAERQKQV--AFS 122 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + F+ K ++S++ L G S+ +GT L + A + + I Sbjct: 123 NTYFLTANRFVAKKSSNLNSIADLKGQSVVSTSGTVNIQELNEVNTAQQLGMNIIAANDH 182 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-SPLAPAIIQGDTEWY 238 E R A+ D L +L + PS + I D S P A + + D E+ Sbjct: 183 AEAFLMVETGRAAAFVMDDILLASLVAGSRDPSGYAISQDAFSNPQPYAIMLRRDDAEFK 242 Query: 239 NIVSWTHYAMVTAEE-LGITQKNINQ 263 +V A+ + E L I K NQ Sbjct: 243 ELVDDATAALYKSPEMLDIYNKWFNQ 268 >gi|163855575|ref|YP_001629873.1| ABC transporter, substrate binding protein [Bordetella petrii DSM 12804] gi|163259303|emb|CAP41603.1| ABC transporter, substrate binding protein [Bordetella petrii] Length = 279 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 37/151 (24%), Positives = 69/151 (45%), Gaps = 5/151 (3%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 T+ + ++S L + L+CGI + +G+DV +C+ ++ A+ + Sbjct: 24 TAQAQSSSTLDRVINSKTLRCGIQLDYPPAGFRTPQNEPEGYDVAYCKDMAKALG---AT 80 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 Q + + ER +L S +ID+L +T T R +S+ + +++ + + HK G+ Sbjct: 81 AQIVETPSAERIPSLVSNRIDVLIASTSITPQRALSVAFSQPYVSFINVA--MTHKDTGV 138 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHN 168 L G +I G+TTE L F N Sbjct: 139 QKFDDLKGRTIGGVTGSTTEQELRAIFNKWN 169 >gi|170751122|ref|YP_001757382.1| extracellular solute-binding protein [Methylobacterium radiotolerans JCM 2831] gi|170657644|gb|ACB26699.1| extracellular solute-binding protein family 3 [Methylobacterium radiotolerans JCM 2831] Length = 299 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 54/231 (23%), Positives = 88/231 (38%), Gaps = 6/231 (2%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQYLP 82 L +K G + G V F+ + N GF +D C + A+ P K+ Y P Sbjct: 30 LKKVKDTGTITLGYRESSVPFSYLDGNQKPVGFSIDVCGKVVEAVKTKLGMPDLKVAYTP 89 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 +N+ R + + +D+ +T L+R+ +AF T+ ++ GI++ Sbjct: 90 VNSATRLPLVANGTVDLECGSTANQLVRQKQ--VAFSVSTFVAQFKWLTRSDSGITTPDD 147 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L + V AGT T L + +K + E R A+ D L Sbjct: 148 LKSKMVAVTAGTNTSQFLNKLNQEDGLKLTIAQGKDHAESFLLVETGRAAAFMEDDILLA 207 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 LK PS IL S P A + D E+ +V T ++ + E Sbjct: 208 GLKANAKDPSRFKILDKAYSADPYALMFRREDPEFKALVDETLIGLMRSGE 258 >gi|293605798|ref|ZP_06688171.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] gi|292815793|gb|EFF74901.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] Length = 273 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 6/130 (4%) Query: 29 DIKKRGFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 DIK RG L CG F+ + A G+DVD C+ ++ + KI Y L+ Sbjct: 29 DIKARGELICGTLGTSQPFSFQDGATRQLVGYDVDVCKLVADKLG---VKINYKLLSVAA 85 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 R L ++DIL+ N ++ R + +AF Y Q ++ K G+ ++ L+G Sbjct: 86 RVPELNEGRVDILAANLGYSPDR--AEQIAFSHAYYVSPQKLLVRKDSGLDTIEALNGRR 143 Query: 148 ICVQAGTTTE 157 I G+++E Sbjct: 144 IGATKGSSSE 153 >gi|116513636|ref|YP_812542.1| amino acid ABC transporter periplasmic protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116092951|gb|ABJ58104.1| amino acid ABC transporter substrate-binding protein, PAAT family [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 270 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 54/235 (22%), Positives = 106/235 (45%), Gaps = 17/235 (7%) Query: 10 LCLIILFFT--SFSTNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCR 65 + L+ L FT S S ++S +K+ + G+ +T L +V + G GF+VD R Sbjct: 3 VLLLSLVFTACSHSQSSSTYDRVKQTNTITWGMRADTRLFSMMDVDS-GKATGFEVDLAR 61 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQID-ILSRNTDWTLLREISLGLAFRPITYF 124 A++ I K++ ++ K R + L+ +D +++ T+ R+I + F + Sbjct: 62 AITKQILGPKGKMKIGYISEKSRIMDLKIGNVDAVMATMTNTPDRRKI---INFSDTYFM 118 Query: 125 DGQGFIMHKKKGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 G+ I+ KK ++S+ + + SI G+T + + Y K I ++ Sbjct: 119 AGETLIVPKKSKLNSIKDFNNSKYSIAAVKGSTADSDVHKYAP----KARVIFYDDYGSC 174 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 A +A + +A D + L L +D + +LPD + P I +G+ ++ Sbjct: 175 YNALKAGKANAMVSDNAVLAG--LISDDKDKFKMLPDTFTVEPYGIGIKKGEDKF 227 >gi|83747214|ref|ZP_00944257.1| Hypothetical Protein RRSL_03006 [Ralstonia solanacearum UW551] gi|207739076|ref|YP_002257469.1| amino-acid-binding periplasmic protein [Ralstonia solanacearum IPO1609] gi|83726189|gb|EAP73324.1| Hypothetical Protein RRSL_03006 [Ralstonia solanacearum UW551] gi|206592448|emb|CAQ59354.1| amino-acid-binding periplasmic protein [Ralstonia solanacearum IPO1609] Length = 290 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 49/176 (27%), Positives = 75/176 (42%), Gaps = 16/176 (9%) Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GF+VD +AL + + +Q P N R LQ ++D+L + L E + LA Sbjct: 75 GFNVDLAQALGRGLGVEVETVQVQPSN---RIQFLQQGRVDLLVAAME--LNPERAELLA 129 Query: 118 FRPITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 P Y+ G ++ K + S L G +C+ G++ LA A P F Sbjct: 130 HVPTPYYRVGGVALVPKDSPVRQWSDLKGKDVCLSQGSSYTRPLAAEIGA-----TPKGF 184 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH-VILPDIISKSPLAPAII 231 + E A R + C A D + L L TN ++ V+ PD+I AP +I Sbjct: 185 KSPAESLLALRGNNCAAAVHDATLLQPLPRTNPEWKDYRVVGPDLIP----APTVI 236 >gi|319795334|ref|YP_004156974.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] gi|315597797|gb|ADU38863.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] Length = 275 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 59/230 (25%), Positives = 97/230 (42%), Gaps = 23/230 (10%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK-----GFDVDFCRALSSAIFDDPSK 77 +A L DIKK+G L G+ +G E D K G++VD A++ I P Sbjct: 22 HADQLADIKKKGELVVGV----LGTDEPATFVDPKTRQIVGYEVDLVNAIAKKIGVKPVL 77 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 Q + R LQ +D+++ RE + F T+ GQ I+ K GI Sbjct: 78 KQ---IAVAARIPELQQGHVDLVAAGLTHNKEREAQID--FSLTTFVTGQKAIVKKDSGI 132 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + + QL G + G T E + + + F+ ++ A + + Y D Sbjct: 133 ADIPQLGGKKVLTIRGGTQEPNIRKAVPTAEV----VTFDTSQQAFQALQQGKGVGYVDD 188 Query: 198 ISAL---YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 +AL YA KL + +++V+L +S LA I +G++ +V T Sbjct: 189 EAALLRSYA-KLGPAK-AQYVVLKQNLSTEALAIGIKKGESGLKAVVDDT 236 >gi|317122404|ref|YP_004102407.1| extracellular solute-binding protein family 3 [Thermaerobacter marianensis DSM 12885] gi|315592384|gb|ADU51680.1| extracellular solute-binding protein family 3 [Thermaerobacter marianensis DSM 12885] Length = 296 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 25/226 (11%) Query: 25 SILGDIKKRGFLKCGINTGL--VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 S+L +IK+RG++ + + F + + G+ GFD+D +A++ + ++Y Sbjct: 65 SLLDEIKERGYMTFATDGAYPPMEFPDPENPGELIGFDIDLGKAIAEKL-----GVEYRV 119 Query: 83 LNAK-ERFLA-LQSKQIDILSRNTDWTLLREISLGLAFRPITYFD-GQGFIMHK--KKGI 137 A+ E LA L++++ D + + T R+ S + YF+ GQ ++ K +GI Sbjct: 120 EVAEWEGLLAGLEARRFDAVMSAMNITEERQKSADF----VQYFEMGQMIVVPKGNPQGI 175 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 S+ L G I VQ GTT E +A + +K + + ++E+ A R DA D Sbjct: 176 QSLDDLKGKVIAVQIGTTNE-EIARGIEGATVKTYQTFPDALQEVAAG----RADATILD 230 Query: 198 IS-ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A Y + D+ E+V +P +P+ A+ +G+ E V Sbjct: 231 EPVARYYANIEGDK-YEYVGVP--FETAPVGIALPKGEDELVQAVQ 273 >gi|218437188|ref|YP_002375517.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7424] gi|218169916|gb|ACK68649.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7424] Length = 261 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 46/207 (22%), Positives = 84/207 (40%), Gaps = 10/207 (4%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L +I +RG L GI + GD +GF++D + L+ I P + P+N Sbjct: 32 LDEIMRRGKLIVGIKDNVKPLGFKNEQGDLQGFEIDIAQRLAQEILGSPDALVLRPVNNL 91 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 ER + +DI T R + ++ Y DG G + K + S+S ++ A Sbjct: 92 ERLEVVIEGTVDITIARVTITPSRSRVVDMSH--YYYLDGTGLVT-KNPSMRSLSDVTSA 148 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 I + ++T + + + I +E ++ D + D S L Sbjct: 149 RIALLKNSSTIVAIKSELPNAQL----IGVNSYQEALTLLETNQADVFAADNSILAG--W 202 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQG 233 D P ++ +LP +S + L+ + +G Sbjct: 203 VQDYP-QYRLLPVRLSGAALSIVMPKG 228 >gi|13472037|ref|NP_103604.1| binding protein component of amino acid ABC transporter [Mesorhizobium loti MAFF303099] gi|14022782|dbj|BAB49390.1| probable binding protein component of amino acid ABC transporter [Mesorhizobium loti MAFF303099] Length = 262 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 53/206 (25%), Positives = 83/206 (40%), Gaps = 17/206 (8%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L +I KRG L+ + T F+ V ANG+ G V+ ++ + KI++L + Sbjct: 25 LDEITKRGELRVAVQTQGPPFSLVGANGERTGSSVELAELMAKEM---GVKIKFLDFDWD 81 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSG 145 AL S + D+L + TL R + + P Y F K + + G Sbjct: 82 GLIPALLSGKADLLVADMTPTLARGMKVAFT-TPYMYTGSTVFTKADSKFKTTEDCKAKG 140 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYH----PIVFERVEEIDAAYRAHRCDAYTGDISAL 201 I V G T E F ++K + P++ + V A + A G +A Sbjct: 141 TKIAVLLGATGEKEAKTAFPDADIKSYKGGGPLLLDAVNNGQADCGVNDVSAVKGQSTAY 200 Query: 202 YALKLTNDRPSEHVILPDIISKSPLA 227 A T I+PD++SK PLA Sbjct: 201 PAGSFT--------IMPDLLSKEPLA 218 >gi|238765045|ref|ZP_04625981.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia kristensenii ATCC 33638] gi|238696731|gb|EEP89512.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia kristensenii ATCC 33638] Length = 263 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 33/160 (20%), Positives = 74/160 (46%), Gaps = 5/160 (3%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K ++IL ++ + + A L I++RG L+ + F V + +G+D+D Sbjct: 4 KKRMLAILGAALILVQAPTVLADQLEQIQQRGVLRVAVPQDFPPFGSVGTDLQPQGYDID 63 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 L+ + K+Q +P+++ R LQ+ ++D++ + RE ++ + Sbjct: 64 MAHYLADKM---KLKLQLVPVSSANRVPYLQTDKVDLVISSLGKNPEREKAIAFSRAYAP 120 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162 +F G K+ + +QL+G ++ V G ++ L++ Sbjct: 121 FF--LGVFGAKEDALQQPAQLAGKTVGVTRGAVEDMVLSE 158 >gi|300811388|ref|ZP_07091884.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497623|gb|EFK32649.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 281 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 53/238 (22%), Positives = 109/238 (45%), Gaps = 16/238 (6%) Query: 6 FVSILCLIILFFT-SFSTNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVD 62 F+++L L ++F S S ++S +K+ + G+ +T L +V ++ GF+VD Sbjct: 11 FMAVLLLSLVFTACSHSQSSSTYDRVKQTNTITWGMRADTRLFSMMDVDSS-KATGFEVD 69 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQID-ILSRNTDWTLLREISLGLAFRPI 121 RA++ I K++ ++ K R + L+ +D +++ T+ R+I + F Sbjct: 70 LARAVTKQILGPKGKMKIEYISEKSRIMDLKIGNVDAVMATMTNTPDRRKI---INFSDT 126 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G+ I+ KK ++S+ + + SI G+T + + Y K I ++ Sbjct: 127 YFMAGETLIVPKKSKLNSIKDFNNSKYSIAAVKGSTADSDVHKYAP----KARVIFYDDY 182 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 A +A + +A D + L L +D + +LPD + P I +G+ ++ Sbjct: 183 GSCYNALKAGKTNAMVSDNAVLAG--LISDDKDKFKMLPDTFTVEPYGIGIKKGEDKF 238 >gi|319762438|ref|YP_004126375.1| extracellular solute-binding protein family 3 [Alicycliphilus denitrificans BC] gi|330825711|ref|YP_004389014.1| ABC transporter periplasmic subunit [Alicycliphilus denitrificans K601] gi|317116999|gb|ADU99487.1| extracellular solute-binding protein family 3 [Alicycliphilus denitrificans BC] gi|329311083|gb|AEB85498.1| ABC-type transporter, periplasmic subunit family 3 [Alicycliphilus denitrificans K601] Length = 300 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 53/265 (20%), Positives = 104/265 (39%), Gaps = 17/265 (6%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 +++ L+ F A L IK G + G+ + + A+G GF VD CR Sbjct: 4 YLAACALVAQGFLHVPVQAQTLEKIKASGAVTMGVRDSSIPLSYAGADGAPIGFHVDICR 63 Query: 66 ALSSAIFDDPS--------KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 + +D + +Y + ++ R + + IDI +T T R+ + A Sbjct: 64 ----KVLEDVQAQLGLARLETRYQLVTSQNRIPLVANGTIDIECGSTTNTQARQKEVAFA 119 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 TY + + GI SV L+G + GTT+ L + ++ + Sbjct: 120 L--TTYVEEVRLAVRADSGIRSVRDLAGKVVVATTGTTSVQHLRRKVRELGLELKDVSLG 177 Query: 178 RVEEIDA--AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + D+ + R DA+ D L A + S ++ ++++ P+A + + D Sbjct: 178 K-DHADSFLLLESGRADAWVLDQGVLRASIANARQSSAFSVVGEVLNAEPIAIMVRKDDP 236 Query: 236 EWYNIVSWTHYAMVTAEELGITQKN 260 + V T ++ + E+ + K Sbjct: 237 GFKRAVDVTIRKLLASGEMQVLWKK 261 >gi|295426474|ref|ZP_06819124.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus amylolyticus DSM 11664] gi|295063842|gb|EFG54800.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus amylolyticus DSM 11664] Length = 271 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 50/237 (21%), Positives = 104/237 (43%), Gaps = 13/237 (5%) Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 +T L G +K G +GF++D +AL+ + + ++L A R L++ +D + Sbjct: 47 DTRLFGLTNIKT-GKIEGFEIDLAKALTKQMLGSSAHAEFLTTTANTRIPLLKNHNVDAV 105 Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 T+ +E + + F + G ++ I++V QL+G ++ GTT Sbjct: 106 L--ATMTITKERAKQVDFTNPYFPAGSSLLVPNSSKITNVKQLNGKTVLAVKGTTA---- 159 Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220 D + K + ++ + +A +A + A T D L + + P + ++ + Sbjct: 160 VDDVHKYAPKAKVLQYDDYGQAMSALKAGQGVALTTDNGLLAG--IAQENPG-YKLVGGV 216 Query: 221 ISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277 + +P AI +G T+ +V+ + A+ ++ G + IN+ K DV+ L Sbjct: 217 YTNAPYGIAINKGQTQ---MVNHLNTALAELKKNGTYNRLINKWFKGIPGFDVKELL 270 >gi|332160644|ref|YP_004297221.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325664874|gb|ADZ41518.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 263 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 32/160 (20%), Positives = 73/160 (45%), Gaps = 5/160 (3%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K +++L +++ + + A L I++RG L+ + F V + +G+D+D Sbjct: 4 KKRMLALLGAVLILVQAPAVLADQLEKIQQRGVLRVAVPQDFPPFGSVGTDLQPQGYDID 63 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 L+ + K+Q +P+ + R LQ+ ++D++ + RE ++ + Sbjct: 64 MAHYLADKM---KLKLQLVPVTSANRVPYLQTDKVDLVISSLGKNPEREKAIAFSRAYAP 120 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162 +F G K+ + QL+G ++ V G ++ L++ Sbjct: 121 FF--LGVFGAKEDALKQPEQLAGKTVGVTRGAVEDMVLSE 158 >gi|311107045|ref|YP_003979898.1| glutamate/aspartate periplasmic-binding protein 2 [Achromobacter xylosoxidans A8] gi|310761734|gb|ADP17183.1| glutamate/aspartate periplasmic-binding protein 2 [Achromobacter xylosoxidans A8] Length = 302 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 47/239 (19%), Positives = 95/239 (39%), Gaps = 9/239 (3%) Query: 10 LCLIILFFTSFSTNASILGDIKK---RGFLKCGINTGLVGFAEVKANGDWKGFDVDFC-- 64 + + +F ++ + G +KK G + G + F+ N G+ +D C Sbjct: 9 VAALAIFMAGAASAQQLDGTLKKVADTGTITIGHRETSIPFSYYDGNQKPVGYSIDICER 68 Query: 65 --RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 RA+ + + +++YLP+ + R + + ID+ +T TL R+ + AF T Sbjct: 69 IVRAVQTRLKRSDIQVKYLPVTSATRIPLMGNGTIDLECASTSNTLDRQQQV--AFSVTT 126 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 + G F+ K + +V L G + +GT + + + + + + E Sbjct: 127 FVTGNRFLSQKSSKLRTVDDLKGKVVASTSGTANIRQINELNETRGLGMRIVPVKEHAEG 186 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 R A+ D LY L +P + + +S P A + + D ++ +V Sbjct: 187 FLMVETGRAAAFVMDDILLYGLIANAKQPDRYEVSDASLSIEPYAIMLRRDDPQFKALV 245 >gi|17544841|ref|NP_518243.1| substrate-binding periplasmic (PBP) ABC transporter protein [Ralstonia solanacearum GMI1000] gi|17427130|emb|CAD13650.1| probable substrate-binding periplasmic (pbp) abc transporter protein [Ralstonia solanacearum GMI1000] Length = 299 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 51/251 (20%), Positives = 100/251 (39%), Gaps = 9/251 (3%) Query: 10 LCLIILFFTSFSTNASI--LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 + + L ++F AS L I++ G ++ V F+ G G+ +D C + Sbjct: 12 MLAVPLAVSAFHAMASTPTLDRIRETGIIRLAYREDSVPFSYTDG-GKPIGYSIDICSRV 70 Query: 68 SSAI---FDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 AI P K+QYLP+ A R + S + D+ +T+ R + AF Y Sbjct: 71 VDAIRTSLKRPELKVQYLPVTAANRMDTIASGKADLECGSTNNAPERREKV--AFTIPHY 128 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 ++ G+ L G ++ G++ + A + + ++ Sbjct: 129 ITKGRMLVKVSSGLQQWDDLHGKTVVAARGSSASDVMHKLNDATGLGMRTVDTNDLKTAF 188 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 A + DA+ GD L ++ T+D PS++V+ S A + + D ++ +V Sbjct: 189 AMLSTGKADAFAGDDVLLAGMRATSDNPSDYVVAGKTQLVSSYAMMMSKQDADFKKLVDQ 248 Query: 244 THYAMVTAEEL 254 + ++ E+ Sbjct: 249 SMTRLIVDGEV 259 >gi|294812666|ref|ZP_06771309.1| putative ABC transporter solute-binding protein [Streptomyces clavuligerus ATCC 27064] gi|326441179|ref|ZP_08215913.1| putative ABC transporter solute-binding protein [Streptomyces clavuligerus ATCC 27064] gi|294325265|gb|EFG06908.1| putative ABC transporter solute-binding protein [Streptomyces clavuligerus ATCC 27064] Length = 354 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 35/142 (24%), Positives = 67/142 (47%), Gaps = 6/142 (4%) Query: 17 FTSFSTNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 T + + + +I+KR L G+ N+ G+ + A GD GFD+D RA++ + D Sbjct: 82 LTPSAADGPSVREIQKRRKLIVGVDQNSYRWGYRD-PATGDLMGFDIDLARAIAEDLLDK 140 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 + + ++ +R LQ ++D++ R T R + +AF + GQ + ++ Sbjct: 141 DGTVVFRAVSTDQRAPLLQEGKLDLVVRTMTITCKR--AREVAFSTAYFETGQQVLAPRQ 198 Query: 135 KGISS-VSQLSGASICVQAGTT 155 I+ + L G +C G+T Sbjct: 199 SKITGHDASLKGKKVCTAEGST 220 >gi|326318473|ref|YP_004236145.1| family 3 extracellular solute-binding protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375309|gb|ADX47578.1| extracellular solute-binding protein family 3 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 300 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 44/175 (25%), Positives = 75/175 (42%), Gaps = 10/175 (5%) Query: 30 IKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 IK+ G L+ G F+ + + +G +GFD + L+ I D SK+Q+ + + R Sbjct: 58 IKQAGTLRLGGTQTSNLFSLLNEKDGRMRGFDAGIAQLLTRYILGDASKVQFTQVTSSTR 117 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGA 146 L + Q+D + T R + A Y+ Q ++ K + I S + L G Sbjct: 118 EQVLVNGQVDTVIATYSITPARAEKISFAG---PYYTSQAGVLVKANNQAIQSYNDLGGK 174 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 + QAG+T LA + ++ F+ +E + R R AY D + L Sbjct: 175 KVATQAGSTGPAILAQFAPKSTVQE----FQTHQEALDSLRQGRVAAYVTDYTLL 225 >gi|149203652|ref|ZP_01880621.1| putative ABC transporter periplasmic amino acid-binding protein [Roseovarius sp. TM1035] gi|149142769|gb|EDM30811.1| putative ABC transporter periplasmic amino acid-binding protein [Roseovarius sp. TM1035] Length = 268 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 41/141 (29%), Positives = 65/141 (46%), Gaps = 7/141 (4%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + A L DI G L+C + AN GFDVD+C L++A+ + ++I Sbjct: 19 TAQADKLDDIISSGTLRCAVVLDFPPMGMRDANNVPIGFDVDYCNDLAAALGVE-AEIVE 77 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ-GFIMHKKKGISS 139 P ER AL S ++D+ +T TL R ++G + I YF + + GI+S Sbjct: 78 TPF--PERIPALMSGRVDVGVASTSDTLERAKTVGFS---IPYFAFEMAVTANSGTGITS 132 Query: 140 VSQLSGASICVQAGTTTELTL 160 + G ++ AGT + L Sbjct: 133 YEGMKGHTVGAVAGTYEAIAL 153 >gi|225378340|ref|ZP_03755561.1| hypothetical protein ROSEINA2194_04001 [Roseburia inulinivorans DSM 16841] gi|225209777|gb|EEG92131.1| hypothetical protein ROSEINA2194_04001 [Roseburia inulinivorans DSM 16841] Length = 299 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 54/222 (24%), Positives = 94/222 (42%), Gaps = 25/222 (11%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L +IK+ G + G+ + F V NG+++G+D+ F L + D + ++ A Sbjct: 54 LDEIKESGTINIGVFSDKNPFGYVDENGEYQGYDIYFANRLGEDLGVD---VNFVSTEAA 110 Query: 87 ERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKKGISSVSQL- 143 R LQ+ ++DI+ N T R E+ L + + G + K I ++ Sbjct: 111 NRIEYLQTGKVDIILANFTVTDERAEEVDFALPYMNVAL----GVVSPDSKVIENLDDWD 166 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD---AYTGDISA 200 S + V +GTT E + D Y I ++ + A A A+ D + Sbjct: 167 SNDQMIVISGTTAETYMID-------NYPDIPLQKYDSYATAKNALENGSGAAWVNDNTE 219 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT---EWYN 239 + A L N V +P + S +APA+ +G+T +W N Sbjct: 220 VIAYALQN--TGYTVGIPSLGSNDTIAPAVSKGNTTLLDWIN 259 >gi|318604514|emb|CBY26012.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Yersinia enterocolitica subsp. palearctica Y11] Length = 263 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 32/160 (20%), Positives = 73/160 (45%), Gaps = 5/160 (3%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K +++L +++ + + A L I++RG L+ + F V + +G+D+D Sbjct: 4 KKRMLALLGAVLILVQAPAVLADQLEKIQQRGVLRVAVPQDFPPFGSVGTDLQPQGYDID 63 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 L+ + K+Q +P+ + R LQ+ ++D++ + RE ++ + Sbjct: 64 MAHYLADKM---KLKLQLVPVTSANRVPYLQTDKVDLVISSLGKNPEREKAIAFSRAYAP 120 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162 +F G K+ + QL+G ++ V G ++ L++ Sbjct: 121 FF--LGVFGAKEDALKQPEQLAGKTVGVTRGAVEDMVLSE 158 >gi|317064770|ref|ZP_07929255.1| extracellular amino acid-binding protein [Fusobacterium ulcerans ATCC 49185] gi|313690446|gb|EFS27281.1| extracellular amino acid-binding protein [Fusobacterium ulcerans ATCC 49185] Length = 287 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 38/153 (24%), Positives = 66/153 (43%), Gaps = 5/153 (3%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K F+++L ++IL S L +KK G+ G++ N + GFD+D Sbjct: 33 KKLFMAVLVIMILASVSLFAADGSLEKVKKDGYFTVGLDATFAPMGFRDENEEIVGFDID 92 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + ++ + + ++ P L+SK ID++ T+ + S AF Sbjct: 93 LAKEVAKRM---GVEAKFKPCEWDGIIFDLRSKNIDMVWNGM--TITEQRSKQAAFTTPY 147 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 DGQ K I+ VS+L G + VQ G++ Sbjct: 148 LVDGQIIFSRKGNEINKVSELEGKVVGVQLGSS 180 >gi|325125286|gb|ADY84616.1| Glutamine ABC transporter solute-binding component [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 270 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 54/235 (22%), Positives = 106/235 (45%), Gaps = 17/235 (7%) Query: 10 LCLIILFFT--SFSTNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCR 65 + L+ L FT S S ++S +K+ + G+ +T L +V + G GF+VD R Sbjct: 3 VLLLSLVFTACSHSQSSSTYDRVKQTNTITWGMRADTRLFSMMDVDS-GKATGFEVDLAR 61 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQID-ILSRNTDWTLLREISLGLAFRPITYF 124 A++ I K++ ++ K R + L+ +D +++ T+ R+I + F + Sbjct: 62 AITKQILGPKGKMKIEYISEKSRIMDLKIGNVDAVMATMTNTPDRRKI---INFSDTYFM 118 Query: 125 DGQGFIMHKKKGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 G+ I+ KK ++S+ + + SI G+T + + Y K I ++ Sbjct: 119 AGETLIVPKKSKLNSIKDFNNSKYSIAAVKGSTADSDVHKYAP----KDRVIFYDDYGSC 174 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 A +A + +A D + L L +D + +LPD + P I +G+ ++ Sbjct: 175 YNALKAGKANAMVSDNAVLAG--LISDDKDKFKMLPDTFTVEPYGIGIKKGEDKF 227 >gi|27382711|ref|NP_774240.1| ABC transporter amino-acid-binding protein [Bradyrhizobium japonicum USDA 110] gi|27355883|dbj|BAC52865.1| ABC transporter amino-acid-binding protein [Bradyrhizobium japonicum USDA 110] Length = 303 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 51/232 (21%), Positives = 92/232 (39%), Gaps = 7/232 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD----DPSKIQYLP 82 L +IK G + G + F+ + N GF +D C + A+ D +++ P Sbjct: 29 LKNIKDTGAITLGFRDSSIPFSYLDDNQKPIGFAMDICYKIVDAVKKELKLDKLEVKLNP 88 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + + R + + ID+ +T R+ + AF + ++ K G+ S+ Sbjct: 89 VTSATRIPLMANGTIDLECGSTTNNADRQKQV--AFTNTHFLTASRYVFKKSSGLKSIDD 146 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G ++ AGTT L + A + + I + E R A+ D L Sbjct: 147 LKGKTVVSTAGTTNIKQLTEANVAKGLGANIIPAKDHAESFLMVETDRAVAFVMDDILLA 206 Query: 203 ALKLTNDRPSEHVILPDIISK-SPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 +L + P ++VI D SK P + + D + +V A+ T+ E Sbjct: 207 SLVAGSKSPDDYVISKDAFSKPEPYGIMLRKDDAPFKKVVDAATAALYTSGE 258 >gi|317405100|gb|EFV85446.1| solute-binding protein [Achromobacter xylosoxidans C54] Length = 273 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 7/154 (4%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFA-EVKANGDWKGFDVDF 63 V+ L L L + A + DIK RG L CG F+ + A G+DVD Sbjct: 6 LIVACLGLAALSLGA-GARADQVADIKARGELICGTLGTSQPFSFQDAATRQLVGYDVDV 64 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 C+ ++ + K+ Y L+ R L ++DIL+ N ++ R + +AF Y Sbjct: 65 CKLVADKL---GVKVSYKLLSVAARVPELNEGRVDILAANLGYSPDR--AEQIAFSHAYY 119 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157 Q ++ K G+ ++ L+G + G+++E Sbjct: 120 VSPQKLLVRKDSGLDTIESLNGRRVGATKGSSSE 153 >gi|309811005|ref|ZP_07704803.1| putative ABC transporter glutamine-binding protein GlnH [Dermacoccus sp. Ellin185] gi|308434969|gb|EFP58803.1| putative ABC transporter glutamine-binding protein GlnH [Dermacoccus sp. Ellin185] Length = 273 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 48/220 (21%), Positives = 89/220 (40%), Gaps = 11/220 (5%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 +K GI G +KA D+KG DVD + ++ + KI ++ +K+R L++ Sbjct: 35 IKIGIKYDQPGLG-LKAGSDYKGLDVDVAKYVAKEMGYGEDKIDFVESPSKQREKMLEAG 93 Query: 96 QIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153 + ++ T R ++S G + + GQ + I SV L+G +C G Sbjct: 94 TVKMIFATYSITDKRKQQVSFGGPY----FVAGQSVLTKADSDIKSVKDLAGKKVCSVTG 149 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 +T+ D K P +++ E A + DA T D + L + + Sbjct: 150 STS----VDNLKKQQPNLVPQQYDKYSECADALASGAIDAMTTDNTILAGYANQDAYKGK 205 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 ++ D ++ + +GD + V+ MV + E Sbjct: 206 FKLVGDAFTEEKYGVGLKKGDKDTCEKVNKAITKMVDSGE 245 >gi|218510513|ref|ZP_03508391.1| probable amino acid ABC transporter, substrate-binding protein [Rhizobium etli Brasil 5] Length = 201 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 43/193 (22%), Positives = 83/193 (43%), Gaps = 13/193 (6%) Query: 1 MYKDFFVSILCLII--LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M F ++ L+ L T S L ++ RG L G + + A+ +G Sbjct: 10 MTISFRTGVISLVAAALLSTPVLAEGSKLDEVLARGHLVLGTGSTNAPWHFKSADDKLQG 69 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD ++ A+F DP KI+Y+ ++ R + + ++DI + T+ E + +AF Sbjct: 70 FDVDMGHIIAKALFGDPEKIEYVNQSSDARIPNITTDKVDITCQF--MTVTGERAQQVAF 127 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI---V 175 Y +G G ++ + + L AG++ +++ A M + + Sbjct: 128 TIPYYREGVGLMLKADGKYADYAALKA------AGSSATISVLQNVYAETMVHAALPEAT 181 Query: 176 FERVEEIDAAYRA 188 ++ E +D Y+A Sbjct: 182 VDQYESVDLIYQA 194 >gi|170288143|ref|YP_001738381.1| extracellular solute-binding protein [Thermotoga sp. RQ2] gi|170175646|gb|ACB08698.1| extracellular solute-binding protein family 3 [Thermotoga sp. RQ2] Length = 246 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 52/225 (23%), Positives = 100/225 (44%), Gaps = 23/225 (10%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + ++ +IK RG+L G++ F V +G+ GFDVD + ++ + +++ + + Sbjct: 18 SGVINEIKSRGYLLVGLSADFPPFEFVDESGNIVGFDVDLAKEIARRL---GVELKIVDM 74 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD-GQGFIMHKKKGI--SSV 140 +L +K+ID++ + T+ E +AF YFD GQ ++ K + Sbjct: 75 TFDGLIPSLLTKKIDVII--SGMTITEERKKVVAFSD-PYFDAGQVIVVRKDSDFRPKTY 131 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY---RAHRCDAYTGD 197 L G ++ VQ GTT ++ ++ KY I R ++ A+ + R DA D Sbjct: 132 EDLVGKTVAVQIGTTGDIEVS--------KYEGIKVVRFDKFTDAFLELKRGRADAVVLD 183 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + A N + VI ++S A+ + DT+ ++ Sbjct: 184 SATARAFVAKN---PDLVISSGVLSSEQYGIAVRKEDTDLLEFIN 225 >gi|227890386|ref|ZP_04008191.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus johnsonii ATCC 33200] gi|227849200|gb|EEJ59286.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus johnsonii ATCC 33200] Length = 273 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 52/241 (21%), Positives = 99/241 (41%), Gaps = 18/241 (7%) Query: 10 LCLIILFFTSFSTNA------SILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDV 61 L I+ F+ F +A ++ ++KK + G+ +T L G +K G +GF+V Sbjct: 8 FSLFIVLFSVFLLSACQKNTRNVYQEVKKSNEITWGVKADTRLFGLMSIKT-GKIEGFEV 66 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D AL+ I +K ++ AK + L++ ID + T+ E + F Sbjct: 67 DLANALTKEILGKNAKANFVQTTAKTKIPLLKNGNIDAVL--AAMTITPERKKQIDFSDP 124 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 ++ GQ ++ I S+ ++G + GTT + K K + F+ + Sbjct: 125 YFYAGQSLLVKDDSTIKSIKDMNGKTALAVKGTTAVANV----KKFAPKAKVLEFDDYGQ 180 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A +A + A T D L + N + ++ + P A+ +G T+ N + Sbjct: 181 AFTALKAGQGQAMTTDNGLLAGIATEN---KGYKLVGGTYTNEPYGIAVNKGQTQMRNAI 237 Query: 242 S 242 + Sbjct: 238 N 238 >gi|291616413|ref|YP_003519155.1| FliY [Pantoea ananatis LMG 20103] gi|291151443|gb|ADD76027.1| FliY [Pantoea ananatis LMG 20103] Length = 280 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 9/141 (6%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 A L DI+KRG L+ + F V + +G+D+D + L+ + K+Q +P+ Sbjct: 42 ADQLQDIQKRGVLRVAVPQDFPPFGSVGTDLQPQGYDIDMAKYLAKQM---KLKLQLVPV 98 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLRE--ISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 + R LQ+ ++D++ + RE I A+ P G K + + Sbjct: 99 TSANRVPYLQTDKVDLVISSMGKNPEREKVIDFSRAYAPFFL----GVFGPKGDHLKDAA 154 Query: 142 QLSGASICVQAGTTTELTLAD 162 LSG S+ V G ++ L++ Sbjct: 155 ALSGKSVGVTRGAVEDMVLSE 175 >gi|119383776|ref|YP_914832.1| extracellular solute-binding protein [Paracoccus denitrificans PD1222] gi|119373543|gb|ABL69136.1| amino acid ABC transporter substrate-binding protein, PAAT family [Paracoccus denitrificans PD1222] Length = 281 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 48/196 (24%), Positives = 74/196 (37%), Gaps = 15/196 (7%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 LF +A L DI G L+CG+ A+G+ GFDV+ C +++ + Sbjct: 28 LFLVGTPASADKLDDIVSSGALRCGVMLDFPPLGYRDASGNPAGFDVETCNDIATQLGVK 87 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG-----F 129 P ++ A +R AL S +DI+ T TL R + +T+ D Sbjct: 88 PEIVE---TQAPQRVPALVSGTVDIVVGGTTPTLERA-------KTVTFTDPYNVGKLVV 137 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 + IS +L G S+ + GT E + + E A R Sbjct: 138 VTGSANKISGFDELKGKSVALVRGTLPETAYLAACNGWSEGCKNLSLANNAEQITAVRQG 197 Query: 190 RCDAYTGDISALYALK 205 R +A S + ALK Sbjct: 198 RANAMIETNSFMSALK 213 >gi|327392853|dbj|BAK10275.1| cystine-binding periplasmic protein precursor FliY [Pantoea ananatis AJ13355] Length = 261 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 36/141 (25%), Positives = 65/141 (46%), Gaps = 9/141 (6%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 A L DI+KRG L+ + F V + +G+D+D + L+ + K+Q +P+ Sbjct: 23 ADQLQDIQKRGVLRVAVPQDFPPFGSVGTDLQPQGYDIDMAKYLAKQM---KLKLQLVPV 79 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLRE--ISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 + R LQ+ ++D++ + RE I A+ P +F G K + + Sbjct: 80 TSANRVPYLQTDKVDLVISSMGKNPEREKVIDFSRAYAP--FF--LGVFGPKGDHLKDAA 135 Query: 142 QLSGASICVQAGTTTELTLAD 162 LSG S+ V G ++ L++ Sbjct: 136 ALSGKSVGVTRGAVEDMVLSE 156 >gi|253582766|ref|ZP_04859986.1| extracellular solute-binding protein [Fusobacterium varium ATCC 27725] gi|251835342|gb|EES63883.1| extracellular solute-binding protein [Fusobacterium varium ATCC 27725] Length = 256 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 37/153 (24%), Positives = 67/153 (43%), Gaps = 5/153 (3%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K F+++L +++ S + L +KK G+ G++ N + GFD+D Sbjct: 2 KKLFMAVLVIMVSASISLFAADNSLEKVKKDGYFTVGLDATFAPMGFRDENEEIVGFDID 61 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + ++ + ++++ P L+SK ID++ T+ E S AF Sbjct: 62 LAKEVAKRM---GVEVKFKPCEWDGIIFDLRSKNIDMVWNGM--TITEERSKQAAFSTPY 116 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 DGQ K I+ VS+L G + VQ G++ Sbjct: 117 LVDGQIIFSRKGNEINKVSELEGKVVGVQLGSS 149 >gi|170748630|ref|YP_001754890.1| extracellular solute-binding protein [Methylobacterium radiotolerans JCM 2831] gi|170655152|gb|ACB24207.1| extracellular solute-binding protein family 3 [Methylobacterium radiotolerans JCM 2831] Length = 267 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 65/228 (28%), Positives = 101/228 (44%), Gaps = 23/228 (10%) Query: 24 ASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 A L I++ G L+ + GF + A G DV++ +A++ A+ K++ Sbjct: 20 ADRLDAIRQAGVLRVAAFDSNPPFGFVD-PATKRINGLDVEYAQAIADALG---VKLEVR 75 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF-DGQGFIMHKKKGISSV 140 P N R L S ++D++ N +T+ E + L F I YF GQ F + KK +SS Sbjct: 76 PTNPANRIPLLTSGKVDLVLAN--FTITDERAKQLDFS-IPYFASGQQF-LAKKGTLSSP 131 Query: 141 SQLSGASICVQAGTTTELTL-ADYFKAHNMKYH--PIVFERVEEIDAAYRAHRCDAYTGD 197 QL+G I GTT E+ L D+ +A + + P F A R A T D Sbjct: 132 EQLNGLRIGADKGTTNEIVLRRDFPRAIVVAFDDTPFAF-------TALRNGNVQAITQD 184 Query: 198 ISALYALKLTNDRPSEHVILPDI-ISKSPLAPAIIQGDTEWYNIVSWT 244 L L L E+ +P IS + I +G+T ++V+ T Sbjct: 185 GPKLVGL-LAKVPDRENYEIPAFSISNDYIGVGIPKGETRLRDLVNET 231 >gi|257470564|ref|ZP_05634654.1| hypothetical protein FulcA4_14556 [Fusobacterium ulcerans ATCC 49185] Length = 256 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 38/153 (24%), Positives = 66/153 (43%), Gaps = 5/153 (3%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K F+++L ++IL S L +KK G+ G++ N + GFD+D Sbjct: 2 KKLFMAVLVIMILASVSLFAADGSLEKVKKDGYFTVGLDATFAPMGFRDENEEIVGFDID 61 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + ++ + + ++ P L+SK ID++ T+ + S AF Sbjct: 62 LAKEVAKRM---GVEAKFKPCEWDGIIFDLRSKNIDMVWNGM--TITEQRSKQAAFTTPY 116 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 DGQ K I+ VS+L G + VQ G++ Sbjct: 117 LVDGQIIFSRKGNEINKVSELEGKVVGVQLGSS 149 >gi|323525063|ref|YP_004227216.1| family 3 extracellular solute-binding protein [Burkholderia sp. CCGE1001] gi|323382065|gb|ADX54156.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1001] Length = 267 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 38/146 (26%), Positives = 67/146 (45%), Gaps = 9/146 (6%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 TS + +A L +I K G LK + F V + +G+D+D L+ ++ Sbjct: 25 MTSPAVHADTLDNIAKAGVLKVAVPEDYPPFGSVGPDMKPQGYDIDTAALLAKSMN---V 81 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE--ISLGLAFRPITYFDGQGFIMHKK 134 K++ +P+N+ R LQ+ ++D++ + T RE I A+ P Y+ QG Sbjct: 82 KLELVPVNSANRIPYLQTGKVDLVISSLGKTPDREKVIDFSTAYAP--YY--QGVFGPAD 137 Query: 135 KGISSVSQLSGASICVQAGTTTELTL 160 +S + L+G ++ G EL L Sbjct: 138 IKVSGPADLTGKTVGATRGALEELGL 163 >gi|52840736|ref|YP_094535.1| amino acid (glutamine) ABC transporter, periplasmic amino acid binding protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52627847|gb|AAU26588.1| amino acid (glutamine) ABC transporter, periplasmic amino acid binding protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 244 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 35/117 (29%), Positives = 51/117 (43%), Gaps = 15/117 (12%) Query: 53 NGDWKGFDVDFCRALS-----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 NG+ KGFD+D + ++ A+FD+ LP AL S Q D+ T Sbjct: 44 NGEIKGFDIDLAKLIAKELGKEAVFDNMQFSTVLP--------ALNSGQDDVAIATI--T 93 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164 + E F YF+G + + + +SQL+G I VQ GT E+ L F Sbjct: 94 ITEERKKNFDFSIPYYFEGMAAVFDISQPVKEISQLTGKKIAVQLGTVMEIWLHQNF 150 >gi|67920538|ref|ZP_00514058.1| hypothetical protein CwatDRAFT_6479 [Crocosphaera watsonii WH 8501] gi|67858022|gb|EAM53261.1| hypothetical protein CwatDRAFT_6479 [Crocosphaera watsonii WH 8501] Length = 158 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 12/100 (12%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 +I DI +RG+LK T + G AE FD++F A+++AIF D +K++ + + Sbjct: 52 TIYDDIIERGYLKVA--TAVSG-AE---------FDLEFTNAMAAAIFGDATKVELVNPS 99 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 E F + + +DI +R T R+ +L + F PI ++ Sbjct: 100 FTEGFEMVATGAVDISARRITKTSGRDATLNIDFSPIYFY 139 >gi|300313535|ref|YP_003777627.1| amino acid ABC transporter/signal transduction system periplasmic protein/domain-containing protein [Herbaspirillum seropedicae SmR1] gi|300076320|gb|ADJ65719.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain protein [Herbaspirillum seropedicae SmR1] Length = 260 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 36/155 (23%), Positives = 69/155 (44%), Gaps = 9/155 (5%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 + F++ A L DI+K G L+ + F V A+ +G D+D ++ + Sbjct: 15 MMFSASVARADALDDIQKHGTLRVAVPADFPPFGSVDADLKPQGLDIDVATLIAKKLG-- 72 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE--ISLGLAFRPITYFDGQGFIMH 132 K++ +P+++ R L +K++D++ + RE I A+ P +F+ G Sbjct: 73 -VKVELIPVSSANRIPYLTTKKVDLVISSMGKNAEREKVIDFSAAYAP--FFN--GVFGP 127 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 + S + L+G +I V G+ +L L A Sbjct: 128 ADLSVKSAADLAGKTIAVTRGSVEDLELTKIVPAS 162 >gi|83745986|ref|ZP_00943042.1| Amino-acid ABC transporter binding protein ybeJ precursor [Ralstonia solanacearum UW551] gi|207741994|ref|YP_002258386.1| substrate-binding periplasmic protein (pbp) [Ralstonia solanacearum IPO1609] gi|83727380|gb|EAP74502.1| Amino-acid ABC transporter binding protein ybeJ precursor [Ralstonia solanacearum UW551] gi|206593380|emb|CAQ60307.1| substrate-binding periplasmic protein (pbp) [Ralstonia solanacearum IPO1609] Length = 299 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 47/232 (20%), Positives = 93/232 (40%), Gaps = 7/232 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQYLP 82 L I++ G ++ V F+ G G+ +D C + AI P K+QYLP Sbjct: 31 LDRIRETGNIRLAYREDSVPFSYTDG-GKPIGYSIDICSRVVDAIRTSLKRPELKVQYLP 89 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + A R + S + D+ +T+ R + AF Y ++ G+ Sbjct: 90 VTAANRMDTIASGKADLECGSTNNAPDRREKV--AFTIPHYITKGRMLVKASSGLQQWED 147 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G ++ G++ + A M + ++ + + + DA+ GD L Sbjct: 148 LHGKTVVAARGSSAADVMHKLNDATGMGMRTVDTNDLKTAFSMLSSGKADAFAGDDVLLA 207 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 ++ T+D P+E+V+ S A + + D E+ ++ + ++ E+ Sbjct: 208 GMRATSDNPTEYVVAGKTQLVSSYAMMMSKQDAEFKKLIDQSMTRLIVDGEV 259 >gi|188025731|ref|ZP_02959612.2| hypothetical protein PROSTU_01484 [Providencia stuartii ATCC 25827] gi|188020278|gb|EDU58318.1| hypothetical protein PROSTU_01484 [Providencia stuartii ATCC 25827] Length = 295 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 55/262 (20%), Positives = 98/262 (37%), Gaps = 33/262 (12%) Query: 9 ILCLIILFFTSFSTNASILGDIKK---RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 +L +++L T + G +KK G + G V F+ N G+ D+ Sbjct: 5 VLSMMVLGATCAVQAEELTGTLKKINDNGVIVVGHRESSVPFSYYDNNQKVVGYSQDYSN 64 Query: 66 ALSSAI---FDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + A+ + P+ +++ +P+ ++ R LQ+ D +T L R+ AF Sbjct: 65 EIVDAVKKKLNKPNLEVKLIPITSQNRIPLLQNGTYDFECGSTTNNLERQKQA--AFSNT 122 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY-------HPI 174 + G + G+ + L+G ++ V +GTT+E+ L NMK H Sbjct: 123 IFVVGTRLLTKNDSGVKDFADLAGKNVVVTSGTTSEILLNKLNDEKNMKMRIISAKDHGD 182 Query: 175 VFERVEE--------IDAAYRAHRCDAYTGDI---------SALYALKLTNDRPSEHVIL 217 F +E DA R A DI Y L D P ++ Sbjct: 183 SFRTLESGRAVAFMMDDALLAGERAKAKKPDIWEIVGKPQTEEAYGCMLRKDDPQFKALV 242 Query: 218 PDIISKSPLAPAIIQGDTEWYN 239 + I+K+ + + W+N Sbjct: 243 DETIAKAQTSGTAEKSFDRWFN 264 >gi|222083302|ref|YP_002542705.1| ABC transporter substrate binding protein (amino acid) [Agrobacterium vitis S4] gi|221738682|gb|ACM39520.1| ABC transporter substrate binding protein (amino acid) [Agrobacterium vitis S4] Length = 272 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 43/156 (27%), Positives = 68/156 (43%), Gaps = 19/156 (12%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRA 66 S L LI+ F + A L DIK +G L CG F+ + G+DVDFC A Sbjct: 10 SALALIVGFGPAL---ADRLDDIKTKGLLVCGTVPNYEPFSFPDPSTRQLVGYDVDFCEA 66 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 ++ + K + ++ R L ++DIL+ + +TL R I Y G Sbjct: 67 IAGKL---GVKFEMKTMSNDARIPELTEGRVDILTADLGYTLTRA-------EQINYSYG 116 Query: 127 QGFIMHK-----KKGISSVSQLSGASICVQAGTTTE 157 + H+ +G + + L+G I V G+T+E Sbjct: 117 YFMVPHRVAVRADRGFADLKSLAGKRIAVIKGSTSE 152 >gi|319762272|ref|YP_004126209.1| extracellular solute-binding protein family 3 [Alicycliphilus denitrificans BC] gi|317116833|gb|ADU99321.1| extracellular solute-binding protein family 3 [Alicycliphilus denitrificans BC] Length = 300 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 10/175 (5%) Query: 30 IKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 IK+ G L+ G F+ + + +G +GFD + ++ I D +K ++ + + R Sbjct: 58 IKQAGTLRLGGTQTSNLFSLLNEKDGKIRGFDAGLAQLITRYILGDGAKYRFTQVTSSTR 117 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGA 146 L + Q+D++ T R + A Y+ Q ++ K K I S + L+G Sbjct: 118 EQVLINDQVDMVFATYSITPARAEKISFAG---PYYTSQAGVLVKANNKTIQSYNDLAGK 174 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 + QAG+T LA Y ++ F+ +E A R R DAY D + L Sbjct: 175 KVATQAGSTGPAILAQYASKAVVQE----FQTHQEALDALRQGRVDAYVTDYTLL 225 >gi|313123232|ref|YP_004033491.1| glutamine ABC transporter, glutamine-binding protein [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312279795|gb|ADQ60514.1| Glutamine ABC transporter, glutamine-binding protein [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 281 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 52/238 (21%), Positives = 108/238 (45%), Gaps = 16/238 (6%) Query: 6 FVSILCLIILFFT-SFSTNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVD 62 +++L L ++F S S ++S +K+ + G+ +T L +V + G GF+VD Sbjct: 11 LMAVLLLSLVFTACSHSQSSSTYDRVKQTNTITWGMRADTRLFSMMDVDS-GKATGFEVD 69 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQID-ILSRNTDWTLLREISLGLAFRPI 121 RA++ I K++ ++ K R + L+ +D +++ T+ R+I + F Sbjct: 70 LARAITKQILGPKGKMKIEYISEKSRIMDLKIGNVDAVMATMTNTPDRRKI---INFSDT 126 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G+ I+ KK ++S+ + + SI G+T + + Y K I ++ Sbjct: 127 YFMAGETLIVPKKSKLNSIKDFNNSKYSIAAVKGSTADSDVHKYAP----KARVIFYDDY 182 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 A ++ + +A D + L L +D + +LPD + P I +G+ ++ Sbjct: 183 GSCYNALKSGKANAMVSDNAVLAG--LISDDKDKFKMLPDTFTVEPYGIGIKKGEDKF 238 >gi|89899053|ref|YP_521524.1| extracellular solute-binding protein [Rhodoferax ferrireducens T118] gi|89343790|gb|ABD67993.1| extracellular solute-binding protein, family 3 [Rhodoferax ferrireducens T118] Length = 266 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 58/234 (24%), Positives = 100/234 (42%), Gaps = 26/234 (11%) Query: 4 DFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 +F +IL F +T +AS L DI+KRG L+ + T F+ + NG+ G V+ Sbjct: 5 NFLPAILLACAGFAGVAATAHASTLDDIQKRGELRIAVQTQGPPFSMIDKNGERTGSSVE 64 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + ++ + K +L L+ AL S + D+L+ + TL R + +P Sbjct: 65 LAKLMAKEM---GVKAVFLDLDWDGLLPALISGKADLLAADMTPTLARATKVAFT-KPFI 120 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE-- 180 Y G ++ K G S+ + + C GT +A F + K VFE+ E Sbjct: 121 YI---GPVVAAKAG----SKFTSTAACKAPGT----KIAVLFGSTGEKLAKTVFEKGEIK 169 Query: 181 -------EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 + A + + D D SA+ A + ++P++++K PLA Sbjct: 170 SYKGGGTLLLDAVKNGQADCLLNDSSAV-AGQAAGYPAGTFKVMPELLAKEPLA 222 >gi|330825798|ref|YP_004389101.1| ABC transporter periplasmic subunit [Alicycliphilus denitrificans K601] gi|329311170|gb|AEB85585.1| ABC-type transporter, periplasmic subunit family 3 [Alicycliphilus denitrificans K601] Length = 300 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 10/175 (5%) Query: 30 IKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 IK+ G L+ G F+ + + +G +GFD + ++ I D +K ++ + + R Sbjct: 58 IKQAGTLRLGGTQTSNLFSLLNEKDGKIRGFDAGLAQLITRYILGDGAKYRFTQVTSSTR 117 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGA 146 L + Q+D++ T R + A Y+ Q ++ K K I S + L+G Sbjct: 118 EQVLINDQVDMVFATYSITPARAEKISFAG---PYYTSQAGVLVKANNKTIQSYNDLAGK 174 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 + QAG+T LA Y ++ F+ +E A R R DAY D + L Sbjct: 175 KVATQAGSTGPAILAQYASKAVVQE----FQTHQEALDALRQGRVDAYVTDYTLL 225 >gi|42518674|ref|NP_964604.1| glutamine ABC transporter solute-binding component [Lactobacillus johnsonii NCC 533] gi|41582960|gb|AAS08570.1| glutamine ABC transporter solute-binding component [Lactobacillus johnsonii NCC 533] Length = 273 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 52/241 (21%), Positives = 99/241 (41%), Gaps = 18/241 (7%) Query: 10 LCLIILFFTSFSTNA------SILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDV 61 L I+ F+ F +A ++ ++KK + G+ +T L G +K G +GF+V Sbjct: 8 FSLFIVLFSVFLLSACQKNTRNVYQEVKKSNEITWGVKADTRLFGLMSIKT-GKIEGFEV 66 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D AL+ I +K ++ AK + L++ ID + T+ E + F Sbjct: 67 DLANALTKEILGKNAKANFVQTTAKTKIPLLKNGNIDAVL--AAMTITPERKKQIDFSDP 124 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 ++ GQ ++ I S+ ++G + GTT + K K + F+ + Sbjct: 125 YFYAGQSLLVKDDSTIKSIKDMNGKTALAVKGTTAVANV----KKFAPKAKVLEFDDYGQ 180 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A +A + A T D L + N + ++ +K P A+ +G + N + Sbjct: 181 AFTALKAGQGQAMTTDNGLLAGIATEN---KGYKLVGGTYTKEPYGIAVNKGQIQMKNAI 237 Query: 242 S 242 + Sbjct: 238 N 238 >gi|302671821|ref|YP_003831781.1| amino acid ABC transporter substrate-binding protein [Butyrivibrio proteoclasticus B316] gi|302396294|gb|ADL35199.1| amino acid ABC transporter substrate-binding protein [Butyrivibrio proteoclasticus B316] Length = 303 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 50/216 (23%), Positives = 88/216 (40%), Gaps = 16/216 (7%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L +IK+ G + G+ + F V NG++ G+DV F + D KI Y+ A Sbjct: 57 LDEIKESGTINIGVFSDKSPFGYVDENGEYAGYDVYFAERIGQ---DLGVKINYVSTEAA 113 Query: 87 ERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 R LQ+ ++DI+ N T R E+ L + + G + I S+ + Sbjct: 114 NRIEYLQTGKVDIILANFTVTEERAQEVDFALPYMNVAL----GVVSPSDAVIDSLDNVG 169 Query: 145 G-ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 I V +GTT E L + ++ ++ E A + D + + A Sbjct: 170 ADDEIIVISGTTAETYLEKNYPDIKLQK----YDAYAEAKTAIENGNAAGWANDNTEVIA 225 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + N+ + V +P + +APA+ +G+ N Sbjct: 226 FAIENEGFT--VGVPSLGDSDTIAPAVTKGNETLLN 259 >gi|281411813|ref|YP_003345892.1| extracellular solute-binding protein family 3 [Thermotoga naphthophila RKU-10] gi|281372916|gb|ADA66478.1| extracellular solute-binding protein family 3 [Thermotoga naphthophila RKU-10] Length = 246 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 52/225 (23%), Positives = 100/225 (44%), Gaps = 23/225 (10%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + ++ +IK RG+L G++ F V +G+ GFDVD + ++ + +++ + + Sbjct: 18 SGVIDEIKSRGYLLVGLSADFPPFEFVDESGNIVGFDVDLAKEIARRL---GVELKIVDM 74 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD-GQGFIMHKKKGI--SSV 140 +L +K+ID++ + T+ E +AF YFD GQ ++ K + Sbjct: 75 TFDGLIPSLLTKKIDVII--SGMTITEERKKVVAFSD-PYFDAGQVIVVRKDSDFRPKTY 131 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY---RAHRCDAYTGD 197 L G ++ VQ GTT ++ ++ KY I R ++ A+ + R DA D Sbjct: 132 EDLVGKTVAVQIGTTGDIEVS--------KYEGIKVVRFDKFTDAFLELKRGRADAVVLD 183 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + A N + VI ++S A+ + DT+ ++ Sbjct: 184 SATARAFVAKN---PDLVISSGVLSSEQYGIAVRKEDTDLLEFIN 225 >gi|191638947|ref|YP_001988113.1| Glutamine ABC transporter, substrate binding protein [Lactobacillus casei BL23] gi|190713249|emb|CAQ67255.1| Glutamine ABC transporter, substrate binding protein [Lactobacillus casei BL23] gi|327382995|gb|AEA54471.1| Sugar binding protein [Lactobacillus casei LC2W] gi|327386183|gb|AEA57657.1| Sugar binding protein [Lactobacillus casei BD-II] Length = 274 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 51/215 (23%), Positives = 87/215 (40%), Gaps = 35/215 (16%) Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 +T L G ++K G +GFDVD +A++ I K Q + + + R ++ +D + Sbjct: 50 DTRLFGLMDIK-TGKIEGFDVDMAKAITKQILGSKGKAQLVQVTSDTRVPMIKGGNVDAV 108 Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS--ICVQ------- 151 T+ E L F + + GQ ++ K I SV L + I VQ Sbjct: 109 IAT--MTITPERQKILDFSDVYFNAGQSILVKKGSPIKSVKDLKKGTKVIGVQGSNSVDN 166 Query: 152 ----AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 A TT L L+DY +A A ++ + DA T D LY + Sbjct: 167 VKKAAPDTTVLQLSDYAQAFT----------------ALKSGQGDALTTDNGILYGM--- 207 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 +++ +++ +K P AI +G + V+ Sbjct: 208 SEQDPNYIVTGGTFTKEPYGIAINKGQKPFVQAVN 242 >gi|15893671|ref|NP_347020.1| periplasmic amino acid-binding protein [Clostridium acetobutylicum ATCC 824] gi|15023229|gb|AAK78360.1|AE007552_10 Periplasmic amino acid-binding protein [Clostridium acetobutylicum ATCC 824] gi|325507793|gb|ADZ19429.1| Periplasmic amino acid-binding protein [Clostridium acetobutylicum EA 2018] Length = 272 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 51/217 (23%), Positives = 85/217 (39%), Gaps = 10/217 (4%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 T S+N L +KK G LK G++ +N GFD+D A+ + K Sbjct: 28 TGSSSNDESLSKVKKAGVLKVGLSDDYPPMEFRDSNNKVSGFDIDMINAIGKKM---GVK 84 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 +Q + + F+AL++K+ D++ T R+ +L L P Y F+ I Sbjct: 85 VQIVTNSFDGIFVALKAKKFDMVQSCVSITDERKSTL-LFSDPYIYGGVAVFVKKSNTTI 143 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 L G + QAGTT E D K N +++ + +R +A D Sbjct: 144 KKPEDLKGKVVGCQAGTTAE----DALKKFNGLKETKKYQQTTDAFLDLENNRIEAVVAD 199 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + T P ++ + + K P+ A + D Sbjct: 200 --PMVGDYYTTKNPGKYEKISKYLGKEPVGAAFRKQD 234 >gi|264680798|ref|YP_003280708.1| amino-acid ABC transporter binding protein ybeJ precursor [Comamonas testosteroni CNB-2] gi|262211314|gb|ACY35412.1| amino-acid ABC transporter binding protein ybeJ precursor [Comamonas testosteroni CNB-2] Length = 320 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 43/207 (20%), Positives = 85/207 (41%), Gaps = 7/207 (3%) Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI--LSRNTDWT 107 + AN + G+ +D C + AI ++++Y+ L + + + D S + T Sbjct: 73 IGANEKFVGYHMDLCERVVHAIAPR-AQLKYMVLTPQNTMPLINNGTADFNCASMTNNLT 131 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 ++++ GL TY + GI+S QL G ++ GTT L Y + Sbjct: 132 RQKQVAFGLT----TYVSEVRMAVRADSGITSFRQLQGRNVGAITGTTAVQILRKYASDN 187 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 + + ++ + E + R DA+ D + L + + P + I+ ++I P+A Sbjct: 188 ELNFKTLMSKDQFESFLMLESGRVDAFVLDDNMLAGVIGQSKNPKGYKIVGEVIGAEPIA 247 Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEEL 254 + D + V M+ + EL Sbjct: 248 IQFSKNDPQIKKAVDGAILQMIRSGEL 274 >gi|313115586|ref|ZP_07801045.1| bacterial extracellular solute-binding protein, family 3 [Faecalibacterium cf. prausnitzii KLE1255] gi|310622101|gb|EFQ05597.1| bacterial extracellular solute-binding protein, family 3 [Faecalibacterium cf. prausnitzii KLE1255] Length = 282 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 55/222 (24%), Positives = 93/222 (41%), Gaps = 25/222 (11%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L IK+ G + G+ + F V NG+++G+DV F R L D +I ++ A Sbjct: 6 LDQIKESGTINIGVFSDKNPFGYVDENGEYQGYDVYFARRLGE---DLGVEINFVSTEAA 62 Query: 87 ERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 R LQ+ + D++ N T R E+ L + + G I I+++ + Sbjct: 63 NRIEYLQTGKADVILANFTVTPERAEEVDFALPYMNVAL----GVISPDSNVITTLDNWN 118 Query: 145 G-ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD---AYTGDISA 200 + V +GTT E L +Y I ++ + A A A+ D + Sbjct: 119 ADDQMIVISGTTAETYLT-------KEYPDIPLQKYDSYATAKNALENGNGVAWANDNTE 171 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT---EWYN 239 + A N V +P + S+ +APA+ QG+T +W N Sbjct: 172 VIAFAKQN--TGYTVGIPSLGSQDTIAPAVSQGNTTVLDWLN 211 >gi|317053830|ref|YP_004117855.1| family 3 extracellular solute-binding protein [Pantoea sp. At-9b] gi|316951825|gb|ADU71299.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b] Length = 274 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 49/216 (22%), Positives = 89/216 (41%), Gaps = 13/216 (6%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L + +RG L+ G F +G+ G+DVD +AL+ + K++ + Sbjct: 36 SALQTVLQRGTLRVGDCLSFAPFGFYDKDGNPDGYDVDLAKALAKEM---GVKLEMVNTT 92 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 + R LQ+ ++D++ N L R +G F + ++ K+ GI S ++ Sbjct: 93 SANRIPNLQTNKVDVVFCNFTRNLERAKEIG--FTNPYVVASEAMLVRKESGIKSAHDMA 150 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL-YA 203 G +I G+T D ++ + ++ + A + + DA D + L Y Sbjct: 151 GKTIATVKGSTN----GDEVRSMGIDVKIQEYDSSQAAILAVKQGQADAMIEDNNFLAYQ 206 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 KL P+ V ++ A + QGD W N Sbjct: 207 AKLD---PTLTVTNEALVPLEYNAFGVKQGDQVWLN 239 >gi|227534089|ref|ZP_03964138.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239629876|ref|ZP_04672907.1| ABC-type amino acid transport/signal transduction system [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301066997|ref|YP_003789020.1| amino acid ABC transporter/signal transduction system periplasmic protein [Lactobacillus casei str. Zhang] gi|227188270|gb|EEI68337.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239527488|gb|EEQ66489.1| ABC-type amino acid transport/signal transduction system [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300439404|gb|ADK19170.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus casei str. Zhang] Length = 274 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 51/215 (23%), Positives = 87/215 (40%), Gaps = 35/215 (16%) Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 +T L G ++K G +GFDVD +A++ I K Q + + + R ++ +D + Sbjct: 50 DTRLFGLMDIK-TGKIEGFDVDMAKAITKQILGSKGKAQLVQVTSDTRVPMIKGGNVDAV 108 Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS--ICVQ------- 151 T+ E L F + + GQ ++ K I SV L + I VQ Sbjct: 109 IAT--MTITPERQKILDFSDVYFNAGQSILVKKGSPIKSVKDLKKGTKVIGVQGSNSVDN 166 Query: 152 ----AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 A TT L L+DY +A A ++ + DA T D LY + Sbjct: 167 VKKAAPDTTVLQLSDYAQAFT----------------ALKSGQGDALTTDNGILYGM--- 207 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 +++ +++ +K P AI +G + V+ Sbjct: 208 SEQDPNYIVTGGTFTKEPYGIAINKGQKPFVQAVN 242 >gi|148360895|ref|YP_001252102.1| amino acid (glutamine) ABC transporter periplasmic amino acid binding protein [Legionella pneumophila str. Corby] gi|296106039|ref|YP_003617739.1| amino acid (glutamine) ABC transporter, periplasmic amino acid binding protein [Legionella pneumophila 2300/99 Alcoy] gi|148282668|gb|ABQ56756.1| amino acid (glutamine) ABC transporter, periplasmic amino acid binding protein [Legionella pneumophila str. Corby] gi|295647940|gb|ADG23787.1| amino acid (glutamine) ABC transporter, periplasmic amino acid binding protein [Legionella pneumophila 2300/99 Alcoy] Length = 244 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 15/117 (12%) Query: 53 NGDWKGFDVDFCRALS-----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 NG+ KGFD+D + ++ A+FD+ LP A+ S Q D+ T Sbjct: 44 NGEIKGFDIDLAKLIAKELGKEAVFDNMQFSAVLP--------AVNSGQDDVAIATI--T 93 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164 + E F YF+G + + + +SQL+G I VQ G+ E+ L F Sbjct: 94 ITEERKKNFDFSKPYYFEGMAAVFDNSQPVKEISQLTGKKIAVQLGSVMEIWLHQNF 150 >gi|238024846|ref|YP_002909078.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain-containing protein [Burkholderia glumae BGR1] gi|237879511|gb|ACR31843.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain protein [Burkholderia glumae BGR1] Length = 269 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 38/152 (25%), Positives = 68/152 (44%), Gaps = 9/152 (5%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + +A L I K G L+ + F V A+ +G+D+D L+ A+ +K+Q Sbjct: 31 AAHADALDSITKSGVLRVAVPEDYPPFGSVGADMQPQGYDIDTAGLLAKALG---AKLQL 87 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLRE--ISLGLAFRPITYFDGQGFIMHKKKGIS 138 +P+N+ R L + ++D++ + T RE I A+ P YF QG +S Sbjct: 88 VPVNSANRIPYLTTNKVDLVISSLGKTPEREKVIDFSAAYGP--YF--QGVFGPADLKVS 143 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 + L+G ++ G E+ L+ +K Sbjct: 144 GPADLTGKTVGATRGALEEIALSQMAPNATIK 175 >gi|160935367|ref|ZP_02082749.1| hypothetical protein CLOBOL_00262 [Clostridium bolteae ATCC BAA-613] gi|158441725|gb|EDP19425.1| hypothetical protein CLOBOL_00262 [Clostridium bolteae ATCC BAA-613] Length = 278 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 48/219 (21%), Positives = 88/219 (40%), Gaps = 11/219 (5%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 ST L + K + G F +G G+DVD L+ ++ +++ Sbjct: 36 STQTGTLQKVLKERKMTVGCILSFPPFGYKSEDGTPMGYDVDMIHELADSL---GVEVEI 92 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + + A R +L++ ++D + N TL R + + F G+ ++ K GI++V Sbjct: 93 VEVTADARIPSLETGKVDAVFGNFTRTLER--AQKIDFSNPYVVAGERLLVKKGSGINTV 150 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L+G + V G+T A+ N + FE + A + +C + D + Sbjct: 151 DDLTGKKVAVTKGSTN----AELMATLNPNAEVVFFETSADALQAVKNGQCATFLEDSNF 206 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 ND V+ +IS A + +GD +W N Sbjct: 207 QQYQAAQND--DLEVVGDSLISLEYNAIGVKKGDQDWLN 243 >gi|222081147|ref|YP_002540510.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221725826|gb|ACM28915.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 267 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 45/178 (25%), Positives = 75/178 (42%), Gaps = 8/178 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 + +A+ L DI RG ++ G+ TG V G+ G+DVD L + P Sbjct: 21 LLATTQAHATTLNDIVSRGKVRIGVLTGAPPMGMVDEKGNPAGYDVDVAN-LIAGYLSLP 79 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 ++ +PL R ALQ+ ++D L T R ++ + +P + F+ I + Sbjct: 80 --VELVPLTPPSRIPALQTGKVDFLVATLAPTGERAKTV-MFTQPYSAFN-MDIISGPDQ 135 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 + +S L G + V G++ E L KA +V+E A A + DA Sbjct: 136 KFTQLSDLQGKRVAVNRGSSQETALR---KAAVPGLEIVVYEDDSTSAQALIAGQTDA 190 >gi|121593036|ref|YP_984932.1| extracellular solute-binding protein [Acidovorax sp. JS42] gi|120605116|gb|ABM40856.1| amino acid ABC transporter substrate-binding protein, PAAT family [Acidovorax sp. JS42] Length = 299 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 53/243 (21%), Positives = 103/243 (42%), Gaps = 7/243 (2%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K ++ ++ ++F+ L IK G + G+ G NG + GF + Sbjct: 2 KKHLLAAAITVLAAGSAFAQANDTLAKIKSTGAVTLGVRES-SGLGYTLGNGKYVGFHTE 60 Query: 63 FCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 + + I +I+Y P+ ++ R + + +DI +T R+ + AF Sbjct: 61 MGERILADIQKQLGLANMEIKYQPVTSQNRIPLVTNGTVDIECGSTTNNTARQKEV--AF 118 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 TY + ++ K GI+ + L+G +I GTT+ TL + +A + + ++ + Sbjct: 119 AVTTYVEEVRIAVNAKSGITGIKDLNGKTIVTTTGTTSVQTLRKHKRADGLNFKEVMGKD 178 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R DA+ D S L A + PS+ I+ +++S P+A I + D + Sbjct: 179 HADSFLMLETGRADAFIMDGSILAANISKSKNPSDFKIVGEVLSVEPIACMIRKDDPAFK 238 Query: 239 NIV 241 V Sbjct: 239 KAV 241 >gi|330429988|gb|AEC21322.1| amino-acid ABC transporter binding protein precursor [Pusillimonas sp. T7-7] Length = 299 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 64/286 (22%), Positives = 109/286 (38%), Gaps = 30/286 (10%) Query: 14 ILFFTSFSTNASI-------LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 I FT+ + A+ L IK G + G + F+ + G+ +D C+ Sbjct: 6 ITLFTALAVVATAPVYADGRLEKIKSSGEIALGHRDSSIPFSYLDDKQQPIGYSMDICKN 65 Query: 67 LSSAIFD----DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + A+ + D ++ +P+ + R L + +D+ ++ T +E + F P T Sbjct: 66 IVEAVKEKLGMDKLNVKMVPVTSSTRIPLLANGTVDLNCGSS--TNTKERQAQVTFAPTT 123 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 + F+ K I+S+ L G ++ AGT+ + + I + E Sbjct: 124 FVTATRFVAKKSSNINSLEDLKGKTVISTAGTSNIRWATGANDQQKLGMNIIPAKDHAEA 183 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 R A+ D L L T+ PSE +I D + P A + D E+ +V Sbjct: 184 LLTVNNGRAAAFFMDDILLAGLVATSRDPSEWMISKDAYTVEPYAIMEPKDDPEFKKVVD 243 Query: 243 WTHYAMVT----AE------ELGITQKNIN-------QVSKDTTNP 271 T M+ AE E I KN+N Q+ K NP Sbjct: 244 DTIKGMMKDGTLAELYKKWFESPIPPKNVNLNWPMSEQLKKVVANP 289 >gi|209521051|ref|ZP_03269783.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] gi|209498507|gb|EDZ98630.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] Length = 270 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 38/148 (25%), Positives = 67/148 (45%), Gaps = 9/148 (6%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 L F + +A L +I K G LK + F V + +G+D+D L+ A+ Sbjct: 26 LAFHAGVAHADTLDNITKAGVLKVAVPEDYPPFGSVGPDMKPQGYDIDTATLLAKAMS-- 83 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE--ISLGLAFRPITYFDGQGFIMH 132 K++ +P+N+ R LQ+ ++D++ + T RE I A+ P Y+ QG Sbjct: 84 -VKLELVPVNSANRIPYLQTGKVDLVISSLGKTPEREKVIDFSTAYAP--YY--QGVFGP 138 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTL 160 +S + L+G ++ G E+ L Sbjct: 139 ADIKVSGPADLTGKTVGATRGALEEIGL 166 >gi|326692922|ref|ZP_08229927.1| amino acid ABC transporter periplasmic protein [Leuconostoc argentinum KCTC 3773] Length = 288 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 57/222 (25%), Positives = 95/222 (42%), Gaps = 22/222 (9%) Query: 6 FVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGF 59 +++ L +++ T+ + S L +++ G + G+ +T L G K G +GF Sbjct: 17 LAAVIVLGLMWATATAKKNSEHEDTLARVERLGRIVWGVKADTKLFGLMNTK-TGTPEGF 75 Query: 60 DVDFCRALSSAIFDD---PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 DVD +AL+ I P Q++P++A + L++ ID T RE + Sbjct: 76 DVDIAKALTVQIAKQTGVPMSAQFIPVSASSKMQLLKNTNIDGSVSTMTITPEREKIIDF 135 Query: 117 AFRPITYFD-GQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHP 173 +P YFD GQ ++ K GI SV + S +I V GTT A K K Sbjct: 136 T-KP--YFDAGQSILVKKDSGIHSVKDMNDSKYTIIVVVGTTA----ATEIKKFAPKAKV 188 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215 + + A ++ + A + D + LY N P H+ Sbjct: 189 LAVQDYATGMQALKSGQGQAMSTDNAILYGFATEN--PEYHI 228 >gi|300704696|ref|YP_003746299.1| glutamate/aspartate ABC transport protein high affinity periplasmic solute-binding protein [Ralstonia solanacearum CFBP2957] gi|299072360|emb|CBJ43698.1| glutamate/aspartate transport protein (ABC superfamily, peri_bind) high affinity periplasmic solute-binding protein [Ralstonia solanacearum CFBP2957] Length = 303 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 50/244 (20%), Positives = 101/244 (41%), Gaps = 15/244 (6%) Query: 8 SILCL---IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 ++LC I+ T+ ++ +L I+ G ++ F+ A+ G+ VD C Sbjct: 12 ALLCSSLSIVAPGTALASATPVLDRIRDTGTVRIAYRESASPFSYSDADKKPIGYAVDLC 71 Query: 65 ----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 L + + K+QY+ + R + + D+ T T RE +AF Sbjct: 72 LRVVDKLRTELKRPDLKVQYVQVTPSSRIPTILEGKADLECSTT--TNNRERREQVAFTI 129 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G ++ GI L ++ GTT+ +A+ + ++ + + E V+ Sbjct: 130 PHYIAGIRMLVKTSSGIHKWDDLRDKTVVSTKGTTS---IAEMRRLNDSRVLHMKVEEVK 186 Query: 181 EIDAAY---RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E A+ + + DA+ D LY+ + P ++ ++ D+++ P A + + D E+ Sbjct: 187 EHADAFAMVESGKADAFVMDDVQLYSFRANAKHPMDYTVVGDMMTVEPYAIMLSKSDPEF 246 Query: 238 YNIV 241 V Sbjct: 247 KRTV 250 >gi|87302929|ref|ZP_01085733.1| polar amino acid transport system substrate-binding proetin [Synechococcus sp. WH 5701] gi|87282425|gb|EAQ74384.1| polar amino acid transport system substrate-binding proetin [Synechococcus sp. WH 5701] Length = 154 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 21/43 (48%), Positives = 30/43 (69%) Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 IR G+ GE+++RNLG S L++ RG N L GGL+++PP R Sbjct: 112 IRAGGHVGEIYERNLGPGSPLRLERGRNRLRHAGGLLWSPPFR 154 Score = 43.1 bits (100), Expect = 0.061, Method: Compositional matrix adjust. Identities = 16/42 (38%), Positives = 28/42 (66%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI 71 I++RG+L CG+ + GF+ V+ +G GF +D C AL++ + Sbjct: 9 IRRRGYLNCGVEGTMPGFSLVEPSGRCSGFALDLCHALAAPM 50 >gi|83745767|ref|ZP_00942824.1| Glutamate/aspartate-binding protein [Ralstonia solanacearum UW551] gi|207743682|ref|YP_002260074.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia solanacearum IPO1609] gi|83727457|gb|EAP74578.1| Glutamate/aspartate-binding protein [Ralstonia solanacearum UW551] gi|206595081|emb|CAQ62008.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia solanacearum IPO1609] Length = 303 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 51/252 (20%), Positives = 105/252 (41%), Gaps = 15/252 (5%) Query: 8 SILCL---IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 ++LC I+ T+ ++ +L I+ G ++ F+ A+ G+ VD C Sbjct: 12 ALLCSSLSIVAPGTALASATPVLDRIRDTGTVRIAYRESASPFSYSDADKKPIGYAVDLC 71 Query: 65 ----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 L + + K+QY+ + R + + D+ T T RE +AF Sbjct: 72 LRVVDKLRTELKRSDLKVQYVLVTPSSRIPTILEGKADLECSTT--TNNRERREQVAFTI 129 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G ++ GI L ++ GTT+ +A+ + ++ + + E V+ Sbjct: 130 PHYIAGIRMLVKTSSGIHKWDDLRDKTVVSTKGTTS---IAEMRRLNDSRVLHMKVEEVK 186 Query: 181 EIDAAY---RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E A+ + + DA+ D LY+ + P ++ ++ D+++ P A + + D E+ Sbjct: 187 EHADAFAMVESGKADAFVMDDVQLYSFRANAKHPMDYTVVGDMMTVEPYAIMLSKSDPEF 246 Query: 238 YNIVSWTHYAMV 249 + V A++ Sbjct: 247 KHSVDRAMTAII 258 >gi|300722327|ref|YP_003711612.1| glutamate/aspartate ABC transporter periplasmic-binding protein [Xenorhabdus nematophila ATCC 19061] gi|297628829|emb|CBJ89407.1| glutamate/aspartate transport protein (ABC superfamily, peri_bind) [Xenorhabdus nematophila ATCC 19061] Length = 295 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 48/219 (21%), Positives = 92/219 (42%), Gaps = 6/219 (2%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQYLP 82 L IK G + G V FA +N + G+ D+ + AI + P+ +++ +P Sbjct: 26 LKKIKDTGMIAVGHRESSVPFAYYDSNQNVIGYAQDYSNMIVDAIKAKLNMPNLQVKLIP 85 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R LQ+ + +T T R+ AF + + +K GI Sbjct: 86 VTSQNRIPLLQNGTYNFECGSTTNTPERQKQA--AFSNTIFIVSTRLLTNKDSGIKGFDD 143 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+G ++ V AGTT+E+ L NMK I + + + R A+ D + L Sbjct: 144 LAGKNVVVSAGTTSEIILNKLNDEKNMKMRIISAKDHGDSFRTLESGRAAAFMVDDALLA 203 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + +P + +I+ + S+ + + D ++ +V Sbjct: 204 GERAKAKKPDQWLIVGEPQSREGYGCLMRKDDAQFKALV 242 >gi|120612710|ref|YP_972388.1| extracellular solute-binding protein [Acidovorax citrulli AAC00-1] gi|120591174|gb|ABM34614.1| amino acid ABC transporter substrate-binding protein, PAAT family [Acidovorax citrulli AAC00-1] Length = 300 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 55/242 (22%), Positives = 104/242 (42%), Gaps = 7/242 (2%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP-- 75 ++F+ L IK G + G+ G + +G + GF D C + S + Sbjct: 17 SAFAQANDTLAKIKASGTITEGVRES-SGLSYTLGDGKYTGFHYDVCARVISDVQKQLGL 75 Query: 76 SKIQ--YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 SK++ Y P+ ++ R +Q+ +DI +T R+ + AF TY + + Sbjct: 76 SKLETRYQPVTSQNRIPLVQNGTVDIECGSTTNNQARQKDV--AFAVTTYVEEVRIAVKA 133 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 GIS + L+G +I GTT+ TL +A + + + + + + R DA Sbjct: 134 NSGISGIKDLNGKTIATTTGTTSVQTLRKNKRAEGLTFKEVFGKDHSDSFLLLESGRADA 193 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 + D S L + + P++ I+ + +S P+A I + D + V + M+ + E Sbjct: 194 FIMDGSILASNIAKSKAPNDFKIVGETLSVEPIAIMIRKDDPAFKKAVDDSLKGMMKSGE 253 Query: 254 LG 255 + Sbjct: 254 MA 255 >gi|183597011|ref|ZP_02958504.1| hypothetical protein PROSTU_00243 [Providencia stuartii ATCC 25827] gi|188023667|gb|EDU61707.1| hypothetical protein PROSTU_00243 [Providencia stuartii ATCC 25827] Length = 276 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 59/227 (25%), Positives = 100/227 (44%), Gaps = 17/227 (7%) Query: 23 NASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 NA L DIK+ G ++ + + GF + + G+DVD +A++ D K++ Sbjct: 22 NADKLDDIKQAGVIRISVFDSNPPFGFIDPQTK-KLAGYDVDIAQAIAD---DLGVKLEL 77 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SS 139 P N R L S ++D++ N +T+ E + + F + GQ FI +KG+ + Sbjct: 78 RPTNPANRIPLLTSGKVDLIGAN--FTITDERAKQVDFSIPDFATGQKFIA--RKGVLKT 133 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 ++ I GT E+TL + + N K I ++ + AA R A T D + Sbjct: 134 PDDIAPLRIGADKGTVQEVTLRERY--PNTKV--ISYDDTPQAFAALRNGNVQAITQDDA 189 Query: 200 ALYAL--KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 L L L ++ I P I++ A A +G+T V+ T Sbjct: 190 KLVGLLGNLPEKVKADFEISPFSITREYQAVAAAKGETRLIENVNNT 236 >gi|116495484|ref|YP_807218.1| amino acid ABC transporter periplasmic protein [Lactobacillus casei ATCC 334] gi|116105634|gb|ABJ70776.1| amino acid ABC transporter substrate-binding protein, PAAT family [Lactobacillus casei ATCC 334] Length = 274 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 51/215 (23%), Positives = 87/215 (40%), Gaps = 35/215 (16%) Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 +T L G ++K G +GFDVD +A++ I K Q + + + R ++ +D + Sbjct: 50 DTRLFGLMDIK-TGKIEGFDVDMAKAITKQILGSKGKAQLVQVTSDTRVPMIKGGSVDAV 108 Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS--ICVQ------- 151 T+ E L F + + GQ ++ K I SV L + I VQ Sbjct: 109 IAT--MTITPERQKILDFSDVYFNAGQSILVKKGSPIKSVKDLKKGTKVIGVQGSNSVDN 166 Query: 152 ----AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 A TT L L+DY +A A ++ + DA T D LY + Sbjct: 167 VKKAAPDTTVLQLSDYAQAFT----------------ALKSGQGDALTTDNGILYGM--- 207 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 +++ +++ +K P AI +G + V+ Sbjct: 208 SEQDPNYIVTGGTFTKEPYGIAINKGQKPFVQAVN 242 >gi|46579379|ref|YP_010187.1| amino acid ABC transporter periplasmic amino acid-binding protein [Desulfovibrio vulgaris str. Hildenborough] gi|120603065|ref|YP_967465.1| extracellular solute-binding protein [Desulfovibrio vulgaris DP4] gi|46448793|gb|AAS95446.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Desulfovibrio vulgaris str. Hildenborough] gi|120563294|gb|ABM29038.1| amino acid ABC transporter substrate-binding protein, PAAT family [Desulfovibrio vulgaris DP4] gi|311233202|gb|ADP86056.1| extracellular solute-binding protein family 3 [Desulfovibrio vulgaris RCH1] Length = 272 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 55/227 (24%), Positives = 100/227 (44%), Gaps = 24/227 (10%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L +I RG L+ G + G + F NG++ GFD+D + ++ A+ ++++P+N Sbjct: 31 STLNEIMARGELRVGFDAGYLPFEMTDKNGNYVGFDIDIAKEMARAM-----GVKFVPVN 85 Query: 85 AKERFL--ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSV 140 + AL S + DI+ + T+ +E +L + F GQ ++ KK + S Sbjct: 86 TDFDGMIPALLSDKFDIII--SGMTVTQERNLKINFADPYIVVGQTVLLSKKLEGKVKSW 143 Query: 141 SQLSGASICV--QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA--HRCDAYTG 196 L+ V + GTT E K F++ E D A R DA+ Sbjct: 144 KDLNSPEYTVVSRLGTTGEEAAKRMLPKAKFK----SFDK--EADGALEVVNGRADAWVY 197 Query: 197 DISALYALKLTNDRPSEHVI-LPDIISKSPLAPAIIQGDTEWYNIVS 242 D+ + + ++ + V+ L + PL I +GD ++ N ++ Sbjct: 198 DMP--FNVVFMAEQGKDKVVHLDKPFTYEPLGFGIKKGDPDFLNFLN 242 >gi|323697765|ref|ZP_08109677.1| extracellular solute-binding protein family 3 [Desulfovibrio sp. ND132] gi|323457697|gb|EGB13562.1| extracellular solute-binding protein family 3 [Desulfovibrio desulfuricans ND132] Length = 286 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 55/232 (23%), Positives = 104/232 (44%), Gaps = 20/232 (8%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 S L I KRG ++ G +T +A NGD+ GF+++ R L+ D K++++P Sbjct: 45 GSQLDVILKRGTIRVGFDT-FKPWAMKDKNGDYIGFEIEVARQLAK---DMGVKVEFVPT 100 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVS 141 AL + + DI+ T R + + + P Y G + +K +G +S+ Sbjct: 101 KWSGIIPALLTGKFDIIIGGMSVTPQRNLKVNFSL-PYEY-SGMSIVASRKLAEGRASIE 158 Query: 142 QLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + G +I V+ GTT ++ + + + ++E+ R H A S Sbjct: 159 DFNNPGTTIAVRLGTTAAEAAKNFLPQAKILFFDEESQTIQEL-LNERVHAVVA-----S 212 Query: 200 ALYALKLTNDRPSEHVILP--DIISKSPLAPAIIQGDTEWYN-IVSWTHYAM 248 L L+ + ++ + LP D ++ P+A A+ +GD ++ N + +W M Sbjct: 213 NPLPLTLSKEY-ADQLFLPLKDDFTREPIAFAVKKGDLDFLNWLNNWVRVTM 263 >gi|153953344|ref|YP_001394109.1| extracellular amino acid-binding protein [Clostridium kluyveri DSM 555] gi|219853973|ref|YP_002471095.1| hypothetical protein CKR_0630 [Clostridium kluyveri NBRC 12016] gi|146346225|gb|EDK32761.1| Predicted extracellular amino acid-binding protein [Clostridium kluyveri DSM 555] gi|219567697|dbj|BAH05681.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 268 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 40/155 (25%), Positives = 75/155 (48%), Gaps = 16/155 (10%) Query: 22 TNASILGDIKKRGFLKCGINTGL--VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 +N + DIK +G G++ +GF + K G GFD+D +A + + K++ Sbjct: 28 SNDTSWDDIKAKGKFVVGLDDSFPPMGFRDEK--GQIVGFDIDMAKAAAEKL---GVKVE 82 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDW---TLLREISLGLAFRPITYFDGQGFIMHKKKG 136 + P+ L+L +K ID++ W T+ E + F + + Q ++ K Sbjct: 83 FKPVEWDGVILSLNNKDIDVI-----WNGLTITEERKKQIVFSKVYLQNKQIIVVQKNST 137 Query: 137 ISSVSQLSGASICVQAGTTTELTL-ADYFKAHNMK 170 I+S LSG ++ +Q G+++E L AD + ++K Sbjct: 138 INSKKDLSGKTVGLQMGSSSEKALNADADTSKSLK 172 >gi|152994486|ref|YP_001339321.1| extracellular solute-binding protein [Marinomonas sp. MWYL1] gi|150835410|gb|ABR69386.1| extracellular solute-binding protein family 3 [Marinomonas sp. MWYL1] Length = 263 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 32/149 (21%), Positives = 69/149 (46%), Gaps = 5/149 (3%) Query: 12 LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI 71 +I F++ S +A +L DIK R ++ + F V + +G DVD ++ + Sbjct: 13 IIAAGFSALSASADVLQDIKDRNLIRIAVPQDFPPFGSVGTDLKPQGIDVDMANYIAKEM 72 Query: 72 FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131 KI+ +P+ + R LQ++++D++ + RE ++ + +F G Sbjct: 73 G---VKIEIIPVTSANRIPYLQTQKVDLVISSLGKNPEREKAIDFSTPYAPFF--LGVFG 127 Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTL 160 K ++ + +L+ ++ V G+ +L L Sbjct: 128 SKDVAVTKIGELADKTVGVTRGSVEDLEL 156 >gi|283785107|ref|YP_003364972.1| putative periplasmic solute-binding protein of ABC transporter [Citrobacter rodentium ICC168] gi|282948561|emb|CBG88152.1| putative periplasmic solute-binding protein of ABC transporter [Citrobacter rodentium ICC168] Length = 272 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 54/217 (24%), Positives = 86/217 (39%), Gaps = 11/217 (5%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L DIK G LK F V G+DVDF AL+ ++ K++ + N Sbjct: 29 LADIKAAGVLKVATFDANPPFGSVDPKTHQIVGYDVDFANALAQSLG---VKLELVATNP 85 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 R LQS + D++ D T+ E + + F + GQ F++ + + S Sbjct: 86 ANRIPLLQSGKADLIV--ADITITPERARVIDFSVPYFVTGQQFLVPATSP-DKLEEYSR 142 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 A I GTT E L F + + ++ + A R A T D + L L Sbjct: 143 ARIGAVKGTTGEQALHQRFPQSRV----LAYDDIPLAFTALRNGNVQAITQDSTILAGLL 198 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + ILPD++SK + + +G+ V+ Sbjct: 199 GGAPDKANFKILPDLLSKEEIGVGVKKGEPALLKAVN 235 >gi|242280218|ref|YP_002992347.1| extracellular solute-binding protein family 3 [Desulfovibrio salexigens DSM 2638] gi|242123112|gb|ACS80808.1| extracellular solute-binding protein family 3 [Desulfovibrio salexigens DSM 2638] Length = 262 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 67/277 (24%), Positives = 112/277 (40%), Gaps = 35/277 (12%) Query: 9 ILCLIILFFTSFSTNASILGD-----IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 +L L++ +F+T A + GD ++K G L G++ + +G GFDVD Sbjct: 4 VLVLMVAMMLAFATTA-MAGDGSLEKVQKAGKLVIGLDDTFAPMGFRQDDGTLVGFDVDA 62 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 + + KI++ P +L +K+ D + T RE ++ +F Sbjct: 63 AEEVGKRL---GIKIEWQPTAWSGVIHSLNAKKFDCIWNGMTITPEREKAV--SFSKPYI 117 Query: 124 FDGQ-GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 DGQ I K I + L G + VQ G+ A ++K P + + E Sbjct: 118 MDGQIAVIAMGNKSIKAHKDLGGKVVGVQKGSPA------LEAAKSLKPAP---KEIREY 168 Query: 183 DAAYRA------HRCDAYTGD-ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 D +A R + D I+ Y++ RP +++ LP I+ A QG+ Sbjct: 169 DTNVKALLDLESGRLNGVVVDNIAGRYSMA---QRPGKYLALPGYITSEAFGIAFRQGED 225 Query: 236 EWYNIVSWTHYAMVTAEELG-ITQKNINQVSKDTTNP 271 V T AM+ +G I++K + D TNP Sbjct: 226 SLRAAVQKTIDAMIADGTMGKISRKWFGE---DVTNP 259 >gi|227355083|ref|ZP_03839494.1| ABC superfamily ATP binding cassette transporter, binding protein [Proteus mirabilis ATCC 29906] gi|227164870|gb|EEI49717.1| ABC superfamily ATP binding cassette transporter, binding protein [Proteus mirabilis ATCC 29906] Length = 279 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 21/228 (9%) Query: 24 ASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 A L DIK+ G ++ I + GF + + G+D D ++ D K++ Sbjct: 23 ADKLDDIKQAGVVRIAIFDSNPPFGFIDPQTK-KLAGYDADIANEIAK---DLGVKLELR 78 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 P N R L +K++D+++ N +T+ E + + F + GQ FI +K ++S Sbjct: 79 PTNPANRIPLLNAKKVDLIAAN--FTITEERAKQVDFSVPYFATGQKFIA-RKGVLTSPE 135 Query: 142 QLSGASICVQAGTTTELTLAD-YFKAHNMKYH--PIVFERVEEIDAAYRAHRCDAYTGDI 198 Q++ I GT E+TL + Y + + Y P+ F AA R A T D Sbjct: 136 QIASLRIGADKGTVQEITLRERYPETKVISYDDTPLAF-------AALRNGNVQAITQDD 188 Query: 199 SALYAL--KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + L L L ++ I P I++ A A +G+ N ++ T Sbjct: 189 AKLVGLLANLPEKIKADFEISPFSITREYQAVAAAKGEQRLINEINNT 236 >gi|219855438|ref|YP_002472560.1| hypothetical protein CKR_2095 [Clostridium kluyveri NBRC 12016] gi|219569162|dbj|BAH07146.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 276 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 60/233 (25%), Positives = 93/233 (39%), Gaps = 28/233 (12%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 T T++++L +IKK G + G G +NG GFDVDF ++ + K Sbjct: 35 TKKDTSSNLLENIKKSGKIVIGTEEGYPPMEFRDSNGQLVGFDVDFSNEVAKRL---GVK 91 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD------GQGF-I 130 ++L ++ LAL SK+ D + IS+ R T F GQ + Sbjct: 92 AEFLVMDFNGIILALNSKKFD--------AAIASISITDERRKTTDFSTPYVVGGQVITV 143 Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190 + ++ I V L G I + GTT E +K + V E +++ R Sbjct: 144 KNGREDIKGVDDLKGKVIACELGTTGENVANGIKGVKELKKYDKVTEAFQDMSIG----R 199 Query: 191 CDAYTGD--ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 DA D + Y K + E +L I+SK P+ A + D N V Sbjct: 200 VDATIIDQQVGGYYIQK----KKDEFKMLEGILSKEPMGVAYRKEDDSLKNEV 248 >gi|310766721|gb|ADP11671.1| Putative amino acid ABC transporter, substrate binding protein [Erwinia sp. Ejp617] Length = 261 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 37/140 (26%), Positives = 67/140 (47%), Gaps = 11/140 (7%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 A L DI+KRG L+ + F V + +G+D+D L+ + K+Q +P+ Sbjct: 23 ADQLQDIEKRGVLRVAVPQDFPPFGSVGTDLQPQGYDIDMATYLARQM---KLKLQLVPV 79 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLRE--ISLGLAFRPITYFDGQGFIMHKKKG-ISSV 140 + R LQ+ ++D++ + RE I A+ P +F G + ++G + S Sbjct: 80 TSANRVPYLQTDKVDLVISSLGKNPEREKVIDFSRAYAP--FFLG---VFGPQQGTLKSA 134 Query: 141 SQLSGASICVQAGTTTELTL 160 ++LSG S+ V G ++ L Sbjct: 135 AELSGKSVGVTRGAVEDMVL 154 >gi|307705123|ref|ZP_07642000.1| ABC transporter substrate-binding protein [Streptococcus mitis SK597] gi|307621319|gb|EFO00379.1| ABC transporter substrate-binding protein [Streptococcus mitis SK597] Length = 279 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 38/153 (24%), Positives = 71/153 (46%), Gaps = 12/153 (7%) Query: 9 ILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 ++ L+ LF T+ + AS +++G + G + V + NG + GFD+D Sbjct: 10 LVSLLTLFLTACTQKASDPKQDNWNKYQEQGSITIGFDNTFVPMGFEEKNGQYTGFDIDL 69 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 +A+S + KIQ+ P++ + LQ+ ID + T R + + I Y Sbjct: 70 AQAVSEKL---GFKIQFQPIDWDMKETELQNGTIDAIWNGYSATDERREKVAFS---IPY 123 Query: 124 FDGQGFIMHKK-KGISSVSQLSGASICVQAGTT 155 + Q ++ KK + I SV + ++ QAG++ Sbjct: 124 MENQQVLVAKKSQQIHSVEDMKDKTLGAQAGSS 156 >gi|312135672|ref|YP_004003010.1| extracellular solute-binding protein family 3 [Caldicellulosiruptor owensensis OL] gi|311775723|gb|ADQ05210.1| extracellular solute-binding protein family 3 [Caldicellulosiruptor owensensis OL] Length = 266 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 67/275 (24%), Positives = 108/275 (39%), Gaps = 30/275 (10%) Query: 1 MYKDFFVSILCLIILFF------TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54 MYK ++++ LI LF +S + + + L IKK G++ N Sbjct: 1 MYKKV-IALVLLISLFIPLLSGCSSNNQDMTTLEKIKKTKEFAVGMDNTFPPMEFADDNN 59 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + GFDVD ++ + +K++ + ++ AL+SK+ D + T R+ + Sbjct: 60 NAVGFDVDLANEIAKKL---GAKLKIVTVDWSGIQSALKSKKFDAIISCFSITDERKKAF 116 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 LA P Y + I S L G I VQA TT + + K N + Sbjct: 117 NLA-GPYLYIRQVIAVKRGDNSIKSFEDLKGIKIGVQANTTGD-SAVQKMKFINYEKDVT 174 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +ER+ + R A D Y K N P + I P + K P+ A+ + D Sbjct: 175 RYERITDAFNDLDIGRIKAVVIDSVVAYYYKKQN--PEKFDIAPAELEKEPVGIALRKED 232 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 E YN + QK ++Q+ KD T Sbjct: 233 KELYNEI----------------QKILDQLKKDGT 251 >gi|153954995|ref|YP_001395760.1| lysine-arginine-ornithine-binding extracellular protein precursor [Clostridium kluyveri DSM 555] gi|146347853|gb|EDK34389.1| Predicted lysine-arginine-ornithine-binding extracellular protein precursor [Clostridium kluyveri DSM 555] Length = 266 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 60/233 (25%), Positives = 93/233 (39%), Gaps = 28/233 (12%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 T T++++L +IKK G + G G +NG GFDVDF ++ + K Sbjct: 25 TKKDTSSNLLENIKKSGKIVIGTEEGYPPMEFRDSNGQLVGFDVDFSNEVAKRL---GVK 81 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD------GQGF-I 130 ++L ++ LAL SK+ D + IS+ R T F GQ + Sbjct: 82 AEFLVMDFNGIILALNSKKFD--------AAIASISITDERRKTTDFSTPYVVGGQVITV 133 Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190 + ++ I V L G I + GTT E +K + V E +++ R Sbjct: 134 KNGREDIKGVDDLKGKVIACELGTTGENVANGIKGVKELKKYDKVTEAFQDMSIG----R 189 Query: 191 CDAYTGD--ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 DA D + Y K + E +L I+SK P+ A + D N V Sbjct: 190 VDATIIDQQVGGYYIQK----KKDEFKMLEGILSKEPMGVAYRKEDDSLKNEV 238 >gi|302526883|ref|ZP_07279225.1| predicted protein [Streptomyces sp. AA4] gi|302435778|gb|EFL07594.1| predicted protein [Streptomyces sp. AA4] Length = 495 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 47/187 (25%), Positives = 79/187 (42%), Gaps = 16/187 (8%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 L+ G + F A G GFD+D RAL+ K+ ++ + ALQ+ Sbjct: 49 LRVGTDATFPPFEFTDAKGGQLGFDIDLVRALAQR--AGIKKVDFVQMPFGNIVPALQAN 106 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGT 154 QID+ + + R+ ++ F I Y G F+ K ++S+ L+G + VQ GT Sbjct: 107 QIDVGASAIYISPARQKAVD--FSDIYYPGGLAVFVSDKDNSVASLKDLAGKRVAVQVGT 164 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA-YTGDISALY------ALKLT 207 + D+ H I + E++ ++ + + DA TG + Y LK Sbjct: 165 KS----VDWLAQHQPAAQLITAQTNEQMFSSVKLGQADAVVTGAPAGKYFIAQQGGLKQV 220 Query: 208 NDRPSEH 214 DR +E Sbjct: 221 GDRLTEE 227 >gi|77407243|ref|ZP_00784204.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus agalactiae H36B] gi|77174149|gb|EAO77057.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus agalactiae H36B] Length = 167 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 26/79 (32%), Positives = 40/79 (50%) Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y D GF++ K I ++ +L G I V G TT++ L Y K H +K+ E+ Sbjct: 24 YHDEIGFLVRKNSHIXTIKELDGKHIGVAQGATTKVNLEKYAKEHKLKFSYAQLGSFPEL 83 Query: 183 DAAYRAHRCDAYTGDISAL 201 + A+R DA++ D S L Sbjct: 84 AISLYANRIDAFSVDKSIL 102 >gi|221069888|ref|ZP_03545993.1| extracellular solute-binding protein family 3 [Comamonas testosteroni KF-1] gi|220714911|gb|EED70279.1| extracellular solute-binding protein family 3 [Comamonas testosteroni KF-1] Length = 320 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 43/207 (20%), Positives = 85/207 (41%), Gaps = 7/207 (3%) Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI--LSRNTDWT 107 + AN + G+ +D C + AI ++++Y+ L + + + D S + T Sbjct: 73 IGANEKFVGYHMDLCERVVHAIAPR-AQLRYMVLTPQNTMPLINNGTADFNCASMTNNLT 131 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 ++++ GL TY + GI+S QL G ++ GTT L Y + Sbjct: 132 RQKQVAFGLT----TYVSEVRMAVRADSGITSFKQLQGRNVGAITGTTAVQILRKYASDN 187 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 + + ++ + E + R DA+ D + L + + P + I+ ++I P+A Sbjct: 188 ELNFKTLMSKDQLESFLMLESGRVDAFVLDDNMLAGVIGQSKNPKGYKIVGEVIGAEPIA 247 Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEEL 254 + D + V M+ + EL Sbjct: 248 IQFSKNDPQIKKAVDGAILQMIRSGEL 274 >gi|207725321|ref|YP_002255717.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia solanacearum MolK2] gi|206590556|emb|CAQ37518.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia solanacearum MolK2] Length = 303 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 51/252 (20%), Positives = 105/252 (41%), Gaps = 15/252 (5%) Query: 8 SILCL---IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 ++LC I+ T+ ++ +L I+ G ++ F+ A+ G+ VD C Sbjct: 12 ALLCSSLSIVAPGTALASATPVLDRIRDTGTVRIAYRESASPFSYSDADKKPIGYAVDLC 71 Query: 65 ----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 L + + K+QY+ + R + + D+ T T RE +AF Sbjct: 72 LRVVDKLRTELKRPDLKVQYVLVTPSSRIPTILEGKADLECSTT--TNNRERREQVAFTI 129 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G ++ GI L ++ GTT+ +A+ + ++ + + E V+ Sbjct: 130 PHYIAGIRMLVKTSSGIHKWDDLRDKTVVSTKGTTS---IAEMRRLNDSRVLHMKVEEVK 186 Query: 181 EIDAAY---RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E A+ + + DA+ D LY+ + P ++ ++ D+++ P A + + D E+ Sbjct: 187 EHADAFAMVESGKADAFVMDDVQLYSFRANAKHPMDYTVVGDMMTVEPYAIMLSKSDPEF 246 Query: 238 YNIVSWTHYAMV 249 + V A++ Sbjct: 247 KHSVDRAMTAII 258 >gi|170692054|ref|ZP_02883218.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] gi|170143338|gb|EDT11502.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] Length = 258 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 39/162 (24%), Positives = 72/162 (44%), Gaps = 10/162 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + ++L +L T +A L +I K G LK + F V + +G+D Sbjct: 1 MRRTLLAALLASPVLAVT-VPAHADTLDNIAKAGVLKVAVPEDYPPFGSVGPDMKPQGYD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE--ISLGLAF 118 ++ L+ ++ K++ +P+N+ R LQ+ ++D++ + T RE I A+ Sbjct: 60 IETAALLAKSMN---VKLELVPVNSANRIPYLQTNKVDLVISSLGKTPDREKVIDFSTAY 116 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 P Y+ QG +S + L+G ++ G EL L Sbjct: 117 AP--YY--QGVFGPADVKVSGPADLTGKTVGATRGALEELGL 154 >gi|159186274|ref|NP_355978.2| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|159141408|gb|AAK88763.2| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 267 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 8/167 (4%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L +I RG +K G+ TG V G+ G+DVD + S + ++ +PL Sbjct: 32 LSEITARGKVKIGVLTGAPPMGMVDEKGNPSGYDVDVANLIGSYL---SLPVELVPLTPP 88 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 R ALQ+ ++D L T R ++ + +P + F+ I K + ++ L G Sbjct: 89 ARIPALQTGKVDFLVATLAPTGERAKTV-MFTQPYSAFN-MDIISGKDQKFENLDSLKGK 146 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 + V G++ E L KA+ +V+E A A + DA Sbjct: 147 RVSVNRGSSQETALR---KANVEGLEIVVYEDDSTSAQALLAGQVDA 190 >gi|300693530|ref|YP_003749503.1| high affinity periplasmic solute-binding protein; high affinity transport system [Ralstonia solanacearum PSI07] gi|299075567|emb|CBJ34860.1| high affinity periplasmic solute-binding protein; high affinity transport system [Ralstonia solanacearum PSI07] Length = 277 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 49/176 (27%), Positives = 74/176 (42%), Gaps = 16/176 (9%) Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GF+VD +AL + + +Q P N R LQ ++DIL + + L E + LA Sbjct: 62 GFNVDLAQALGRGLGVEVETVQVQPSN---RIPFLQQGRVDILVASME--LNPERAGLLA 116 Query: 118 FRPITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 P Y+ G ++ K + S L G +C+ G++ LA A P F Sbjct: 117 HVPTPYYRVGGVALVPKDSPVRRWSDLKGKEVCLSQGSSYAKPLAAEIGA-----TPKGF 171 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH-VILPDIISKSPLAPAII 231 + E A R C A D + L L N ++ V+ PD+I AP +I Sbjct: 172 KSPAESLLALRGSNCAAAVHDATLLQPLPRANPEWKDYRVVGPDLIP----APTVI 223 >gi|194292630|ref|YP_002008537.1| high affinity periplasmic solute-binding protein; high affinity transport system [Cupriavidus taiwanensis LMG 19424] gi|193226534|emb|CAQ72485.1| high affinity periplasmic solute-binding protein; high affinity transport system [Cupriavidus taiwanensis LMG 19424] Length = 276 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 56/248 (22%), Positives = 102/248 (41%), Gaps = 30/248 (12%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + L IK+RG + G+ G F + G++ D R L+ + + + +P+ Sbjct: 27 ATLDRIKQRGKVSIGVLVGGSLFGSIDPVTQQLVGWNPDLARDLAKRLG---VEAELVPV 83 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 R LQ ++D+L + ++ R LG A P G ++ K+ GI+ L Sbjct: 84 QPSNRVQFLQQGKVDLLIASMEYNAERGELLGHAPTPFYRVGGTAAVL-KRSGIAKWDDL 142 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIV--FERVEEIDAAYRAHRCDAYTGDISAL 201 G ++C G++ Y K +Y V F+ E A R +C A D + + Sbjct: 143 RGKTVCASQGSS-------YVKPLQEQYGAQVRGFKTSAESLLALRGGQCVAAVHDATLI 195 Query: 202 YALKLTNDRPSEHVI-LPDIISKSPLAPAIIQGDT-----------EWYNIVSWTHYAMV 249 + L +N +++ +P I +P +G+T EW+ + + + Sbjct: 196 HPLVRSNADWTDYAAPIPAEILPAPSVVWTRKGETDTIAAVDKIVQEWHR----SGWLIA 251 Query: 250 TAEELGIT 257 T + LGIT Sbjct: 252 TEKRLGIT 259 >gi|269219728|ref|ZP_06163582.1| CjaA protein [Actinomyces sp. oral taxon 848 str. F0332] gi|269210970|gb|EEZ77310.1| CjaA protein [Actinomyces sp. oral taxon 848 str. F0332] Length = 400 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 42/168 (25%), Positives = 77/168 (45%), Gaps = 9/168 (5%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 IK G ++ G+ F ++G G+DV++ + ++ D K++ +P+ A R Sbjct: 115 IKAAGTVRIGVFGDKAPFGYTDSDGTNVGYDVEYAKRIAK---DLGVKLELVPVVADSRV 171 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 L S ++D++ N +T+ E + + F G + K I+S SQLSG I Sbjct: 172 EYLTSGKVDVILAN--FTVTPERAEKVDFAKPYMKVSLGAVSRKDAPITSESQLSGKKIL 229 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 V GTT + Y +A + + P +++ ++ A R D + D Sbjct: 230 VVKGTTAD----SYIQAKHPDWKPAKYDQYSDVYNALADGRGDVWVTD 273 >gi|259909374|ref|YP_002649730.1| Putative amino acid ABC transporter, substrate binding protein [Erwinia pyrifoliae Ep1/96] gi|224964996|emb|CAX56524.1| Putative amino acid ABC transporter, substrate binding protein [Erwinia pyrifoliae Ep1/96] gi|283479446|emb|CAY75362.1| putative ABC transport system, periplasmic component [Erwinia pyrifoliae DSM 12163] Length = 261 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 37/140 (26%), Positives = 67/140 (47%), Gaps = 11/140 (7%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 A L DI+KRG L+ + F V + +G+D+D L+ + K+Q +P+ Sbjct: 23 ADQLQDIEKRGVLRVAVPQDFPPFGSVGTDLQPQGYDIDMATYLARQM---KLKLQLVPV 79 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLRE--ISLGLAFRPITYFDGQGFIMHKKKG-ISSV 140 + R LQ+ ++D++ + RE I A+ P +F G + ++G + S Sbjct: 80 TSANRVPYLQTDKVDLVISSLGKNPEREKVIDFSRAYAP--FFLG---VFGPQQGTLKSA 134 Query: 141 SQLSGASICVQAGTTTELTL 160 ++LSG S+ V G ++ L Sbjct: 135 AELSGKSVGVTRGAVEDMVL 154 >gi|325062203|gb|ADY65893.1| amino acid ABC transporter, substrate binding protein [Agrobacterium sp. H13-3] Length = 267 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 8/167 (4%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L +I RG +K G+ TG V G+ G+DVD + S + ++ +PL Sbjct: 32 LSEITARGKVKIGVLTGAPPMGMVDEKGNPSGYDVDVANLIGSYL---SLPVELVPLTPP 88 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 R ALQ+ ++D L T R ++ + +P + F+ I K + ++ L G Sbjct: 89 ARIPALQTGKVDFLVATLAPTGERAKTV-MFTQPYSAFN-MDIISGKDQKFENLDSLKGK 146 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 + V G++ E L KA+ +V+E A A + DA Sbjct: 147 RVSVNRGSSQETALR---KANVEGLEIVVYEDDSTSAQALLAGQVDA 190 >gi|300811758|ref|ZP_07092231.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497257|gb|EFK32306.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 276 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 58/241 (24%), Positives = 100/241 (41%), Gaps = 17/241 (7%) Query: 5 FFVSILCLIILFFTSFSTNASIL----------GDIKKRGFLKCGINTGLVGFAEVKANG 54 +F IL L ++ +T S L IKKRG L G++ V + +G Sbjct: 3 WFKKILLLGLVLSCFLTTACSNLTKEANQKDTWAKIKKRGSLVIGLDDTFVPMDFRQKDG 62 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G+DVD +A+ + K + ++ + L++ ID+L T R+ Sbjct: 63 QLVGYDVDLAKAVCKKL---GLKADFQTIDWSMKETELRNGTIDVLWNGYSVTSQRKKK- 118 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 +AF + Q ++ K GI S +Q+ G +I Q+G+T ++ L K K + Sbjct: 119 -VAFSRSYLRNRQVLVVKKSSGIKSFAQMKGQAIGAQSGSTAQIWLDGSQKVIKPK-SKV 176 Query: 175 VFERVEEIDAAYRAHRCDAYTGDIS-ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 +++ + A R D + A Y +K D S VIL + + A + +G Sbjct: 177 LYDTIPSAFLDLNAGRIKGILLDETYAEYYIKHEADSKSYQVILNKEVPEDLFAVGMRKG 236 Query: 234 D 234 D Sbjct: 237 D 237 >gi|54296522|ref|YP_122891.1| hypothetical protein lpp0553 [Legionella pneumophila str. Paris] gi|53750307|emb|CAH11701.1| hypothetical protein lpp0553 [Legionella pneumophila str. Paris] Length = 244 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 15/117 (12%) Query: 53 NGDWKGFDVDFCRALS-----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 NG+ KGFD+D + ++ A+FD+ LP A+ S Q D+ T Sbjct: 44 NGEIKGFDIDLAKLIAKELGKEAVFDNMQFSAVLP--------AVNSGQDDVAIATI--T 93 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164 + E F YF+G + + + +SQL+G I VQ G+ E+ L F Sbjct: 94 ITEERKKNFDFSKPYYFEGMAAVFDTSQPVKEISQLTGKKIAVQLGSVMEIWLHQNF 150 >gi|197286727|ref|YP_002152599.1| amino acid ABC transporter substrate-binding protein [Proteus mirabilis HI4320] gi|194684214|emb|CAR45712.1| putative amino acid ABC transporter, substrate-binding protein [Proteus mirabilis HI4320] Length = 279 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 21/228 (9%) Query: 24 ASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 A L DIK+ G ++ I + GF + + G+D D ++ D K++ Sbjct: 23 ADKLDDIKQAGVVRIAIFDSNPPFGFIDPQTK-KLAGYDADIANEIAK---DLGVKLELR 78 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 P N R L +K++D+++ N +T+ E + + F + GQ FI +K ++S Sbjct: 79 PTNPANRIPLLSAKKVDLIAAN--FTITEERAKQVDFSVPYFATGQKFIA-RKGVLTSPE 135 Query: 142 QLSGASICVQAGTTTELTLAD-YFKAHNMKYH--PIVFERVEEIDAAYRAHRCDAYTGDI 198 Q++ I GT E+TL + Y + + Y P+ F AA R A T D Sbjct: 136 QIASLRIGADKGTVQEITLRERYPETKVISYDDTPLAF-------AALRNGNVQAITQDD 188 Query: 199 SALYAL--KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + L L L ++ I P I++ A A +G+ N ++ T Sbjct: 189 AKLVGLLANLPEKIKADFEISPFSITREYQAVAAAKGEQRLINEINNT 236 >gi|330810053|ref|YP_004354515.1| ABC transporter, periplasmic component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327378161|gb|AEA69511.1| ABC transporter, periplasmic component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 272 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 48/198 (24%), Positives = 83/198 (41%), Gaps = 15/198 (7%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 +A L DI G L+C + + GFDVD+C L+ + D ++ P Sbjct: 23 HADKLDDIIGSGKLRCAVTLDFPPMGFRDESNKPAGFDVDYCNDLAKVLGVDAEVVE-TP 81 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVS 141 + +R AL S + D++ +T TL R ++GL + YF Q ++ + GI+S + Sbjct: 82 FS--DRIPALLSGRADVIVASTSDTLERAKTVGLT---VPYFAFQMVVLTRDNTGITSYA 136 Query: 142 QLSGASICVQAGTTTELTL--------ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 L G ++ + T + L + F+A+ + ++ IDA + A Sbjct: 137 DLKGKALGNTSSTYEAIALEKDQKSWGSGSFRAYQSQNDTLLAVAQGHIDATVVTNTVAA 196 Query: 194 YTGDISALYALKLTNDRP 211 T LK+ D P Sbjct: 197 ATIKSGKYKGLKIAGDAP 214 >gi|307701962|ref|ZP_07638970.1| ABC transporter substrate-binding protein - glutamine transport [Streptococcus mitis NCTC 12261] gi|307616607|gb|EFN95796.1| ABC transporter substrate-binding protein - glutamine transport [Streptococcus mitis NCTC 12261] Length = 279 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 18/156 (11%) Query: 9 ILCLIILFFTSFSTNASILGDIKK--------RGFLKCGINTGLVGFAEVKANGDWKGFD 60 ++ L+ LF T+ + AS D KK +G + G + V + NG + GFD Sbjct: 10 LVSLLTLFLTACTQKAS---DPKKDNWDKYQEQGTITIGFDNTFVPMGFEEKNGQYTGFD 66 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +A+S + K+Q+ P++ + LQ+ ID + T R + + Sbjct: 67 IDLAQAVSEKL---GVKVQFQPIDWDMKETELQNGTIDAIWNGYAATDERREKVAFS--- 120 Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTT 155 I Y + Q ++ KK + I SV + ++ QAG++ Sbjct: 121 IPYMENQQVLVAKKSQQIRSVEDMKDKTLGAQAGSS 156 >gi|313124501|ref|YP_004034760.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312281064|gb|ADQ61783.1| Amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 276 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 51/206 (24%), Positives = 89/206 (43%), Gaps = 7/206 (3%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 IKKRG L G++ V + +G G+DVD +A+ + K + ++ + Sbjct: 38 IKKRGSLVIGLDDTFVPMDFRQKDGQLVGYDVDLAKAVCKKL---GLKADFQTIDWSMKE 94 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 L++ ID+L T R+ +AF + Q ++ K GI S +Q+ G +I Sbjct: 95 TELRNGTIDVLWNGYSVTSQRKKK--VAFSRSYLRNRQVLVVKKSSGIKSFAQMKGQAIG 152 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS-ALYALKLTN 208 Q+G+T ++ L K K ++++ + A R D + A Y +K Sbjct: 153 AQSGSTAQIWLDGSQKVIKPK-SKVLYDTIPSAFLDLNAGRIKGILLDETYAEYYIKHEA 211 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGD 234 D S VIL + + A + +GD Sbjct: 212 DSKSYQVILNKEVPEDLFAVGMRKGD 237 >gi|257461099|ref|ZP_05626197.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] gi|257441473|gb|EEV16618.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] Length = 269 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 52/238 (21%), Positives = 104/238 (43%), Gaps = 19/238 (7%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 IL L++ S + A L +IK G L+ G+ F++++ +G +GF+VD ++ Sbjct: 5 ILSLLVAALASSALCARSLSEIKSSGVLRIGVYDAQPPFSKIE-DGVHQGFEVDMANTIA 63 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ- 127 + K+++ + A +R LQ ++D + T RE + YF Sbjct: 64 KDMLPSGGKVEFTSVLANQRIKFLQEDKVDAVIATLTVTPEREKQIDFT---TPYFSVNI 120 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 G + + I S+++L +I V +G T E YF+ R + +A Y+ Sbjct: 121 GILTRVEDKIKSLNELQDKTILVLSGGTAET----YFEKQGYN-----IARCDNANACYK 171 Query: 188 AHRC---DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A + D Y D + A + + + V + ++ + LA + +G++E + ++ Sbjct: 172 ALKAGQGDGYADDNLVVLAYPVLDKKV--EVNIKNLGTSDFLAIGVKKGNSELLDFLN 227 >gi|289168136|ref|YP_003446405.1| ABC transporter substrate binding lipoprotein-amino acid transport [Streptococcus mitis B6] gi|288907703|emb|CBJ22540.1| ABC transporter substrate binding lipoprotein-amino acid transport [Streptococcus mitis B6] Length = 279 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 45/194 (23%), Positives = 82/194 (42%), Gaps = 15/194 (7%) Query: 9 ILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 ++ L+ LF T+ + AS +++G + G + V + NG + GFD+D Sbjct: 10 LVSLLTLFLTACTQKASDPKQDNWDKYQEQGTITIGFDNTFVPMGFEEKNGQYTGFDIDL 69 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 +A+S + K+Q+ P++ + LQ+ ID + T R + + I Y Sbjct: 70 AQAVSEKL---GFKVQFQPIDWDMKETELQNGTIDAIWNGYSATDERREKVAFS---IPY 123 Query: 124 FDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPIVFERV 179 + Q ++ KK + I SV + ++ QAG++ L D K H ++ Sbjct: 124 MENQQVLVTKKSQWIHSVEDMKDKTLGAQAGSSGYLDFEAQPDLLKNHVKDQKANQYQSF 183 Query: 180 EEIDAAYRAHRCDA 193 E + R DA Sbjct: 184 NEALIDLKNDRIDA 197 >gi|222529920|ref|YP_002573802.1| extracellular solute-binding protein family 3 [Caldicellulosiruptor bescii DSM 6725] gi|222456767|gb|ACM61029.1| extracellular solute-binding protein family 3 [Caldicellulosiruptor bescii DSM 6725] Length = 266 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 67/275 (24%), Positives = 106/275 (38%), Gaps = 30/275 (10%) Query: 1 MYKDFFVSILCLIILFF------TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54 MYK ++++ LI LF TS N + L IKK G++ N Sbjct: 1 MYKKV-IALVLLIALFIPFLSGCTSNDQNMTTLEKIKKTKEFVVGMDNTFPPMEFTDDNN 59 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + GFDVD ++ + +K++ + ++ AL+SK+ D + T R+ + Sbjct: 60 NTVGFDVDLANEIAKKL---GAKLKIVAVDWSGIQSALKSKKFDAIISCFSITDERKKAF 116 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 LA P Y + I S L G I VQA TT + K N + Sbjct: 117 NLA-GPYLYIRQVIAVKKGDSSIKSFEDLKGIKIGVQANTTGD-NAVQKMKFINYEKDVT 174 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +ER+ + R A D Y K N P + I P + + P+ A+ + D Sbjct: 175 RYERITDAFNDLDIGRIKAVVIDSVVAYYYKKQN--PEKFDIAPAQLEREPVGIALRKED 232 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 + YN + QK ++Q+ KD T Sbjct: 233 KDLYNEI----------------QKILDQLKKDGT 251 >gi|299069550|emb|CBJ40822.1| putative substrate-binding periplasmic (PBP) ABC transporter protein [Ralstonia solanacearum CMR15] Length = 298 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 49/219 (22%), Positives = 86/219 (39%), Gaps = 6/219 (2%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD---PS-KIQYLP 82 L IK G ++ V F+ + ANG G+ +D C L AI D+ P K+QYL Sbjct: 29 LDRIKATGAIRLAHRESSVPFSYLDANGKPIGYSMDLCMRLVDAIRDNLKRPDLKVQYLQ 88 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + R A+ S + D+ +T+ RE +AF Y ++ GI + Sbjct: 89 VTPATRMDAIASGKADLECASTNNA--RERREKVAFTIPHYIANGRMLVKTASGIHQMED 146 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G ++ G+ + +A + + E A + A+ D L Sbjct: 147 LRGKTVVSTRGSANGNLVRQLSEAGGLGITVVETADHSESFAMLADGKAQAFAMDDVLLA 206 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +K P+++ I+ P A + + D E+ ++ Sbjct: 207 GMKANAKNPADYAIVGKTQQVVPYAIMLSKNDPEFKKLI 245 >gi|169334518|ref|ZP_02861711.1| hypothetical protein ANASTE_00921 [Anaerofustis stercorihominis DSM 17244] gi|169259235|gb|EDS73201.1| hypothetical protein ANASTE_00921 [Anaerofustis stercorihominis DSM 17244] Length = 280 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 45/191 (23%), Positives = 91/191 (47%), Gaps = 24/191 (12%) Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI----LSRNTDWTLL 109 G+ GFD++ +A++ D +++++ + F L + + D+ +S N D Sbjct: 61 GELAGFDIELAKAIAK---DMGLEVEFVQVGFDAIFAGLDADKYDVAISAISVNKD---- 113 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAH 167 R+ +L L+ TY Q ++ K G I SV +LSG + VQ GTT + Y + Sbjct: 114 RQETLALSD---TYLANQQVVISAKDGKQIKSVKELSGKKVAVQVGTTADEACQYYQEKE 170 Query: 168 NMKYHPIVFERVEEIDAAYRAHR---CDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 +++ ++++++ AA+ A + D D+ + N+ P ++V D ++ Sbjct: 171 GLEFD---LQQLDDMTAAFLALKSGNVDCVVTDL--VVGDYYVNNFPKDYVKSCDKLTNE 225 Query: 225 PLAPAIIQGDT 235 P+A A + +T Sbjct: 226 PIAIAAKKSNT 236 >gi|253990333|ref|YP_003041689.1| arginine-binding periplasmic protein 1 [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253781783|emb|CAQ84946.1| arginine-binding periplasmic protein 1 [Photorhabdus asymbiotica] Length = 244 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 40/160 (25%), Positives = 68/160 (42%), Gaps = 20/160 (12%) Query: 47 FAEVKANGDWKGFDVDFCRALSSAI-----FDDPSKIQYLPLNAKERFLALQSKQIDILS 101 F + AN +GFD+D AL + I F + S +P +L+ ++ D L+ Sbjct: 36 FEFIDANNQIQGFDIDLANALCTKINATCTFTNQSFDSLIP--------SLKFRRFDALA 87 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 D T R+ + TY+D + K ISSV++L G + +Q GTT + Sbjct: 88 AGMDITPERQKQVDFT---DTYYDNSAVFIAIKGKISSVAELKGKQVGIQNGTTHQ---- 140 Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 Y + + ++ + + R DA GD +A+ Sbjct: 141 KYLIEQQKEIKTVPYDSYQNAILDLKNGRLDAIFGDTAAI 180 >gi|268592306|ref|ZP_06126527.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Providencia rettgeri DSM 1131] gi|291312087|gb|EFE52540.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Providencia rettgeri DSM 1131] Length = 279 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 58/244 (23%), Positives = 104/244 (42%), Gaps = 17/244 (6%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDF 63 ++ + L L T+ +A L DIK+ G ++ + + GF + + G+DVD Sbjct: 5 ILTTVLLTGLALTANVASADKLDDIKQAGVIRISVFDSNPPFGFIDPQTK-KLAGYDVDI 63 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 + ++ + K++ P N R L S ++D++ N +T+ E + + F + Sbjct: 64 AQEIADGLG---VKLELRPTNPANRIPLLTSGKVDLIGAN--FTITDERAKQVDFSIPDF 118 Query: 124 FDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 GQ FI +KG+ + + I GT E+TL + F + I ++ + Sbjct: 119 ATGQKFIA--RKGVLKTPDDIKPLRIGADKGTVQEVTLRERFPETKV----ISYDDTPQA 172 Query: 183 DAAYRAHRCDAYTGDISALYAL--KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 AA R A T D + L L L ++ I P ++K A A +G+T Sbjct: 173 FAALRNGNVQAITQDDAKLVGLLGNLPEKVKADFEISPFSLTKEYQALAASKGETRLVEN 232 Query: 241 VSWT 244 V+ T Sbjct: 233 VNET 236 >gi|186474262|ref|YP_001861604.1| extracellular solute-binding protein [Burkholderia phymatum STM815] gi|184196594|gb|ACC74558.1| extracellular solute-binding protein family 3 [Burkholderia phymatum STM815] Length = 270 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 50/199 (25%), Positives = 93/199 (46%), Gaps = 17/199 (8%) Query: 7 VSILCLIILFFTSFS-TNAS-----ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 VS+L + T+FS +AS +L +K G L+ G+ F A+G+ +GFD Sbjct: 7 VSVLLRGAVIATAFSFVSASAHAQDLLETVKSSGVLRVGLEGTYPPFDYKNASGELEGFD 66 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A+++ + P Q++P LQ+ + D++ T R+ +L + +P Sbjct: 67 VDVAKAVAARLGVKP---QFVPTEWSGILAGLQAGKFDVIVNQVTITPQRKQALDFS-QP 122 Query: 121 ITYFDGQGFI-MHKKKGISSVSQLSG-ASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 T+ Q + K+ +S+++ SG + V GT + +A N++ +P E+ Sbjct: 123 YTFSAAQLIQRVDDKREFNSLAEFSGDKKLGVTLGTNYD-QMARTVSGINVQTYPGAPEK 181 Query: 179 VEEIDAAYRAHRCDAYTGD 197 + ++ A R DA D Sbjct: 182 LRDLSAG----RIDATLDD 196 >gi|116492193|ref|YP_803928.1| amino acid ABC transporter periplasmic protein [Pediococcus pentosaceus ATCC 25745] gi|116102343|gb|ABJ67486.1| amino acid ABC transporter substrate-binding protein, PAAT family [Pediococcus pentosaceus ATCC 25745] Length = 278 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 47/199 (23%), Positives = 87/199 (43%), Gaps = 14/199 (7%) Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 +T L G +VK + KGFD+D +AL+ + +K ++ + ++ R L++ +D + Sbjct: 52 DTKLFGLMDVK-DSQIKGFDIDIAKALTKQMLGKKAKANFIQVTSQTRIPLLKNGNLDAI 110 Query: 101 SRNTDWTLLREISLGLAFRPITYFD-GQGFIMHKKKGISSVSQLS--GASICVQAGTTTE 157 T RE + + +YFD GQ ++ K I SV L+ G + G+ + Sbjct: 111 IATMTITKEREKVVDFSN---SYFDAGQSLLVKKGSSIKSVKDLNKPGTKVIGVVGSNS- 166 Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 + K K I + + A ++ + A T D L+ + + D P+ V+ Sbjct: 167 ---VENIKKFAPKAQVIQLQDYAQALTALKSGQGAALTTDNGILFGMAV--DNPNYQVV- 220 Query: 218 PDIISKSPLAPAIIQGDTE 236 +K P AI +G + Sbjct: 221 GKAFTKEPYGIAINKGQGQ 239 >gi|158313076|ref|YP_001505584.1| extracellular solute-binding protein [Frankia sp. EAN1pec] gi|158108481|gb|ABW10678.1| extracellular solute-binding protein family 3 [Frankia sp. EAN1pec] Length = 323 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 54/255 (21%), Positives = 106/255 (41%), Gaps = 11/255 (4%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S + ++ G + G F G+ +GFDV+ R ++ A+ K++++ Sbjct: 75 STMAKLQSAGTITVGTKFDQPLFGLKNLRGEPEGFDVEIARIITDALGIPADKVKFVETV 134 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQL 143 + R ++ ++D++ +T+ + + F Y GQ ++ + I+ L Sbjct: 135 SANREPFIEQHRVDLVVAT--YTINDKRKQVVDFAGPYYVAGQTLMVRAGETAITGKDTL 192 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 +G +C +G+T A+ + +F+ + A +A + DA T D + L Sbjct: 193 AGKKVCSVSGSTP----AERIRTQAPDAELTLFDVYSKCAEALKAGQVDAVTTDNAIL-- 246 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN-IN 262 L L + P ++ + S P I +GD E+ ++ T A T K+ I Sbjct: 247 LGLMDSDPGAFKLVGEPFSTEPYGIGIAKGDDEFRTFINDTLEAAYTDGRYETAYKDTIG 306 Query: 263 QVSKD-TTNPDVQRF 276 +V D T P V R+ Sbjct: 307 KVEPDMPTPPAVDRY 321 >gi|325685426|gb|EGD27527.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 276 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 51/206 (24%), Positives = 89/206 (43%), Gaps = 7/206 (3%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 IKKRG L G++ V + +G G+DVD +A+ + K + ++ + Sbjct: 38 IKKRGSLVIGLDDTFVPMDFRQKDGQLVGYDVDLAKAVCKKL---GLKADFQTIDWSMKE 94 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 L++ ID+L T R+ +AF + Q ++ K GI S +Q+ G +I Sbjct: 95 TELRNGTIDVLWNGYSVTSQRKKK--VAFSRSYLRNRQILVVKKSSGIKSFAQMKGQAIG 152 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS-ALYALKLTN 208 Q+G+T ++ L K K ++++ + A R D + A Y +K Sbjct: 153 AQSGSTAQIWLDGSQKVIKPK-SKVLYDTIPSAFLDLNAGRIKGILLDETYAEYYIKHEA 211 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGD 234 D S VIL + + A + +GD Sbjct: 212 DSKSYQVILNKEVPEDLFAVGMRKGD 237 >gi|312899028|ref|ZP_07758415.1| putative glutamine ABC transporter periplasmic protein [Megasphaera micronuciformis F0359] gi|310619935|gb|EFQ03508.1| putative glutamine ABC transporter periplasmic protein [Megasphaera micronuciformis F0359] Length = 255 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 63/224 (28%), Positives = 98/224 (43%), Gaps = 23/224 (10%) Query: 1 MYKDFFVSI-LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M+K F I L LI + + +S G+ +K L G+N F E D+ GF Sbjct: 1 MFKKFLALITLTLIAVSALTGCGTSSPQGNTEKT--LIIGMNPNFPPF-EFTQGEDYVGF 57 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD +A++ + P +I+ + + ALQS QID+++ D T R + Sbjct: 58 DVDLSKAIAEKLGMKP-EIKAMAFDG--LIPALQSGQIDLIASGMDATPERREHVNFT-- 112 Query: 120 PITYF-DGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV-- 175 TYF DG ++ K I S L ++ Q GT ADY K +Y +V Sbjct: 113 -QTYFKDGYTIVVRKDNDTIHSFDDLKDITVGAQMGTKA----ADYAK----QYGAVVKE 163 Query: 176 FERVEEIDAAYRAHRCDAYTGD-ISALYALKLTNDRPSEHVILP 218 F + ++ +H CDA + + ALY L ++ + V P Sbjct: 164 FNQNDQCWMELESHTCDAVVVNRVVALYFLNQGGNKAFKTVGEP 207 >gi|161523531|ref|YP_001578543.1| extracellular solute-binding protein [Burkholderia multivorans ATCC 17616] gi|189351696|ref|YP_001947324.1| polar amino acid transporter substrate-binding protein [Burkholderia multivorans ATCC 17616] gi|221201670|ref|ZP_03574708.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia multivorans CGD2M] gi|221207255|ref|ZP_03580265.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia multivorans CGD2] gi|221213394|ref|ZP_03586369.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia multivorans CGD1] gi|160340960|gb|ABX14046.1| extracellular solute-binding protein family 3 [Burkholderia multivorans ATCC 17616] gi|189335718|dbj|BAG44788.1| polar amino acid transport system substrate-binding protein [Burkholderia multivorans ATCC 17616] gi|221166846|gb|EED99317.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia multivorans CGD1] gi|221172843|gb|EEE05280.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia multivorans CGD2] gi|221178486|gb|EEE10895.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia multivorans CGD2M] Length = 266 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 49/196 (25%), Positives = 85/196 (43%), Gaps = 14/196 (7%) Query: 17 FTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 FT+ + +A +L +KK G L+ G+ F +G +GFDVD A++ + Sbjct: 19 FTAVAAHAEDLLDSVKKAGVLRVGLEGTYPPFNSRGTSGQLEGFDVDVANAVAGKLG--- 75 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-- 133 K Q++P LQ+ + D++ T R+ +L + P TY Q I K Sbjct: 76 VKTQFIPTEWSGIIAGLQAGKFDVIVNQVTITPQRKEALDFS-EPYTYSAAQ-LIQRKDD 133 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 K+ S+ G + V GT + +A ++ +P E++ ++ A R +A Sbjct: 134 KRDFKSLEDFKGKKLGVTLGTNYD-QMARSVPGIEVQTYPGAPEKLRDLAAG----RIEA 188 Query: 194 YTGDISAL-YALKLTN 208 D L Y +K +N Sbjct: 189 TLDDRLMLPYMIKTSN 204 >gi|291302343|ref|YP_003513621.1| extracellular solute-binding protein family 3 [Stackebrandtia nassauensis DSM 44728] gi|290571563|gb|ADD44528.1| extracellular solute-binding protein family 3 [Stackebrandtia nassauensis DSM 44728] Length = 315 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 57/227 (25%), Positives = 97/227 (42%), Gaps = 25/227 (11%) Query: 29 DIKKRGFLKCG--INTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK------IQY 80 DI G L G + L G + KA G +GFD + R ++ IF ++ I+ Sbjct: 68 DILDSGRLTIGSKFDQPLTGLRD-KATGRIEGFDAEIGRIITQRIFGKVAEGENLDFIET 126 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +P N +E++L + +D++ +T+ E + F Y GQ + K +GI + Sbjct: 127 VPAN-REKYL--EDGTVDLVLAT--YTITPERKKAVTFAGPYYEAGQAIMTRKGEGIEDI 181 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA---HRCDAYTGD 197 LS +C GTT+ D + HN + + V + + + +A DA + D Sbjct: 182 KDLSKKKVCAAEGTTS----LDNVEKHNPRAN--VSKPMRNWSSCRQALLEKEYDAVSTD 235 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 LY L+ D PS+ I + P + +G TE ++ T Sbjct: 236 DVILYGF-LSED-PSKLEISKKTFTTEPYGIGLPKGSTELQKFINET 280 >gi|117619722|ref|YP_857305.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117561129|gb|ABK38077.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 283 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 57/240 (23%), Positives = 102/240 (42%), Gaps = 22/240 (9%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 IL ++L + + S L + +RG L+ G + G F G + GFDVD + ++ Sbjct: 27 ILSTLLLCGLANAAPTSTLDAVLERGVLRVGFDAGYQPFEMTNKQGQYIGFDVDLAKMVA 86 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 + K++++ AL + + D++ T R + + A I GQ Sbjct: 87 KEM---GVKVEFVNTAWDGIIPALLTDKFDVIMGGMTVTPQRNLRVNFADPYIVV--GQT 141 Query: 129 FIMHKKKG--ISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K K I S + L+ I V+ GTT E + + + FE ++ Sbjct: 142 IVLRKDKAGEIKSFTDLNDPKYKIAVKLGTTGEQAVKRLIPKATL----LQFETQDDAKL 197 Query: 185 AYRAHRCDAYTGDI--SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE---WYN 239 + DA+ D+ +A++A + N H+ P + PLA AI +GD + W+N Sbjct: 198 EVINGKVDAFVYDLPYNAIFATQ--NKGAVVHLDKP--FTFEPLAWAIRKGDQDTLNWFN 253 >gi|254253412|ref|ZP_04946730.1| ABC-type amino acid transport/signal transduction systems periplasmic component [Burkholderia dolosa AUO158] gi|124896021|gb|EAY69901.1| ABC-type amino acid transport/signal transduction systems periplasmic component [Burkholderia dolosa AUO158] Length = 266 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 49/196 (25%), Positives = 85/196 (43%), Gaps = 14/196 (7%) Query: 17 FTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 FT+ + +A +L +KK G L+ G+ F +G +GFDVD A++ + Sbjct: 19 FTAVAAHAEDLLDSVKKAGVLRVGLEGTYPPFNSRGTSGQLEGFDVDVANAVAGKLG--- 75 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-- 133 K Q++P LQ+ + D++ T R+ +L + P TY Q I K Sbjct: 76 VKTQFIPTEWSGIIAGLQAGKFDVIVNQVTITPQRKEALDFS-EPYTYSAAQ-LIQRKDD 133 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 K+ S+ G + V GT + +A ++ +P E++ ++ A R +A Sbjct: 134 KRDFKSLEDFKGKKLGVTLGTNYD-QMARSVPGIEVQTYPGAPEKLRDLAAG----RIEA 188 Query: 194 YTGDISAL-YALKLTN 208 D L Y +K +N Sbjct: 189 TLDDRLMLPYMIKTSN 204 >gi|237737433|ref|ZP_04567914.1| extracellular solute-binding protein [Fusobacterium mortiferum ATCC 9817] gi|229421295|gb|EEO36342.1| extracellular solute-binding protein [Fusobacterium mortiferum ATCC 9817] Length = 253 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 36/160 (22%), Positives = 72/160 (45%), Gaps = 6/160 (3%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K F +S++ ++ +F +SF + S L +K++G+ G++ +G+ GFD+D Sbjct: 2 KKFLMSLVLMVCVFVSSFGADKS-LETVKEKGYFIVGLDATFAPMGYRDESGEIVGFDID 60 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + ++ + + ++ P L+SK ID++ T R + +AF Sbjct: 61 LAKEVAKRM---GVEARFKPCEWDAIIFDLRSKNIDMVWNGMTITPAR--AKQVAFTKPY 115 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162 D Q K + V L+G + VQ G++ ++ D Sbjct: 116 LSDNQIIFTRKGTAPAKVQDLAGKVVGVQLGSSGAQSVED 155 >gi|119945248|ref|YP_942928.1| ABC transporter extracellular solute-binding protein [Psychromonas ingrahamii 37] gi|119863852|gb|ABM03329.1| ABC transporter extracellular solute-binding protein, family 3 [Psychromonas ingrahamii 37] Length = 275 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 43/154 (27%), Positives = 67/154 (43%), Gaps = 10/154 (6%) Query: 7 VSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 +S++ + +FST +A L D+ G L CG+ N GFDVD+C Sbjct: 7 ISLVVASMAAIGAFSTASADKLDDVINSGTLNCGVVLDFPPMGYTDKNNQPAGFDVDYCN 66 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 L+ + K + L +R +L S + D++ +T TL R S+G + P F Sbjct: 67 DLAKVL---GVKSNVINLTWGDRIPSLISAKTDVVVGSTSDTLARAKSVGFTY-PYFVFK 122 Query: 126 GQGFIMHKKKGI--SSVSQLSGASICVQAGTTTE 157 F + KKG+ +S L + GTT E Sbjct: 123 ---FQVLSKKGVKMTSFDDLKNVKVGAALGTTYE 153 >gi|241204562|ref|YP_002975658.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858452|gb|ACS56119.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 262 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 53/206 (25%), Positives = 81/206 (39%), Gaps = 17/206 (8%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L DI KRG L+ + T F+ V A G+ G V+ ++ + KI +L + Sbjct: 25 LDDIAKRGELRVAVQTQGPPFSLVDAAGERTGSSVELAELMAKEM---GVKITFLDFDWD 81 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSG 145 AL S + D+L + TL R + + +P Y F K + + G Sbjct: 82 GLIPALLSGKADLLVADMTPTLARGMKVAFT-KPYMYTGSTVFTKAGGKFNTTGDCKAKG 140 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYH----PIVFERVEEIDAAYRAHRCDAYTGDISAL 201 I V G T E F +K + P++ + V A + A G +A Sbjct: 141 TKIAVLLGATGEKEAKAAFPDAEIKSYKGGGPLLLDAVNNGQADCGVNDVSAVKGQSTAY 200 Query: 202 YALKLTNDRPSEHVILPDIISKSPLA 227 A T I+PD++SK PLA Sbjct: 201 PAGSFT--------IMPDMLSKEPLA 218 >gi|238765553|ref|ZP_04626466.1| Extracellular solute-binding protein, family 3 [Yersinia kristensenii ATCC 33638] gi|238696231|gb|EEP89035.1| Extracellular solute-binding protein, family 3 [Yersinia kristensenii ATCC 33638] Length = 284 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 51/192 (26%), Positives = 81/192 (42%), Gaps = 21/192 (10%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSK 77 S + +A L DIK+ G ++ + F + G+DVD A++ D K Sbjct: 24 SGAAHADKLDDIKQAGVVRIAVFDSNPPFGYIDPQTKKLVGYDVDVANAIAK---DLGVK 80 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWT--LLREISLGLAFRPITYFDGQGFIMHKKK 135 ++ N R L SK++D+++ N T +E++ L + + GQ FI HK Sbjct: 81 VELRATNPANRIPLLTSKKVDLIAANFTITDDRAKEVNFSLPY----FATGQKFIAHKGV 136 Query: 136 GISSVSQLSGASICVQAGTTTELTLAD-YFKAHNMKYH--PIVFERVEEIDAAYRAHRCD 192 + + ++G I GT E+TL D Y A + Y P+ F A R Sbjct: 137 -LKTPEDIAGLRIGADKGTVQEITLRDRYPTAKVISYDDTPVAF-------TALRNGNVQ 188 Query: 193 AYTGDISALYAL 204 A T D + L L Sbjct: 189 AITQDDAKLVGL 200 >gi|115352263|ref|YP_774102.1| extracellular solute-binding protein [Burkholderia ambifaria AMMD] gi|115282251|gb|ABI87768.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia ambifaria AMMD] Length = 330 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 42/195 (21%), Positives = 77/195 (39%), Gaps = 6/195 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQYLP 82 L I++ G + G V F+ V A+G GF D C + +A+ K ++++P Sbjct: 61 LEKIRQAGLISIGHRETSVPFSYVDASGKVIGFSQDLCDRVIAAVKARTGKPDLQVRFIP 120 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R +Q+ +D+ T R +AF + + GI Sbjct: 121 VTSQNRIPLVQNGTVDLECGVTTNLAARHAQ--VAFSTTFFVATTRLLTRTSSGIRDFPD 178 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+G ++ GTT+E L + M I + E + R AY D L Sbjct: 179 LAGKTVVTNQGTTSERLLRKMNEEKKMNMQIISAKDYGEGRLTLESGRAAAYMMDDVLLA 238 Query: 203 ALKLTNDRPSEHVIL 217 ++ +P++ I+ Sbjct: 239 GVRQLAAKPADWAIV 253 >gi|152981681|ref|YP_001351726.1| ABC transporter substrate binding protein [Janthinobacterium sp. Marseille] gi|151281758|gb|ABR90168.1| ABC transporter substrate binding protein [Janthinobacterium sp. Marseille] Length = 259 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 36/149 (24%), Positives = 72/149 (48%), Gaps = 10/149 (6%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 L T+ + A L DI+K+G L+ + F V + +G D+D ++ + Sbjct: 15 LLLTNVA-RADALDDIQKKGVLRVAVPQDFPPFGSVTTDMTPQGLDIDVATLIAKKLG-- 71 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE--ISLGLAFRPITYFDGQGFIMH 132 K++ +P+ + R LQ+K++D++ + RE I A+ P +F+G Sbjct: 72 -VKVELIPVTSANRIPYLQTKKVDLVISSMGKNPEREKVIDFSAAYAP--FFNGVFGPAD 128 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLA 161 +K +++ + L+G +I V G+ +L L+ Sbjct: 129 QK--VAAPADLAGKTIGVTRGSVEDLELS 155 >gi|54293480|ref|YP_125895.1| hypothetical protein lpl0529 [Legionella pneumophila str. Lens] gi|53753312|emb|CAH14759.1| hypothetical protein lpl0529 [Legionella pneumophila str. Lens] gi|307609294|emb|CBW98770.1| hypothetical protein LPW_05691 [Legionella pneumophila 130b] Length = 244 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 34/117 (29%), Positives = 51/117 (43%), Gaps = 15/117 (12%) Query: 53 NGDWKGFDVDFCRALS-----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 NG+ KGFD+D + ++ A+FD+ LP AL S Q D+ T Sbjct: 44 NGEIKGFDIDLAKLIAKELGKEAVFDNMQFSTVLP--------ALNSGQDDVAIATI--T 93 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164 + E F YF+G + + + +SQL+G I VQ G+ E+ L F Sbjct: 94 ITEERKKNFDFSIPYYFEGMAAVFDISQPVKEISQLTGKKIAVQLGSVMEIWLHQNF 150 >gi|299531960|ref|ZP_07045360.1| amino-acid ABC transporter binding protein ybeJ precursor [Comamonas testosteroni S44] gi|298720135|gb|EFI61092.1| amino-acid ABC transporter binding protein ybeJ precursor [Comamonas testosteroni S44] Length = 320 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 43/207 (20%), Positives = 85/207 (41%), Gaps = 7/207 (3%) Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI--LSRNTDWT 107 + AN + G+ +D C + AI ++++Y+ L + + + D S + T Sbjct: 73 IGANEKFVGYHMDLCERVVHAIAPR-AQLKYMVLTPQNTMPLINNGTADFNCASMTNNLT 131 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 ++++ GL TY + GI+S QL G ++ GTT L Y + Sbjct: 132 RQKQVAFGLT----TYVSEVRMAVRVDSGITSFKQLQGRNVGAITGTTAVQILRKYASDN 187 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 + + ++ + E + R DA+ D + L + + P + I+ ++I P+A Sbjct: 188 ELNFKTLMSKDQFESFLMLESGRVDAFVLDDNMLAGVIGQSKNPKGYKIVGEVIGAEPIA 247 Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEEL 254 + D + V M+ + EL Sbjct: 248 IQFSKDDPQIKKAVDGAILQMIRSGEL 274 >gi|218886440|ref|YP_002435761.1| extracellular solute-binding protein family 3 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218757394|gb|ACL08293.1| extracellular solute-binding protein family 3 [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 272 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 55/225 (24%), Positives = 96/225 (42%), Gaps = 22/225 (9%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L +I RG L+ G + G + F NG++ GFD+D + L+ A+ ++++P+N Sbjct: 31 STLNEIMARGELRVGFDAGYMPFEMTDKNGNYVGFDIDLAKELAKAM-----GVKFVPVN 85 Query: 85 AKERFL--ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSV 140 + AL S + DI+ + T+ +E +L + F GQ I+ KK + + Sbjct: 86 TDFDGMIPALLSDKFDIII--SGMTVTQERNLRINFANPYIVVGQSVIVSKKHEGKVKTW 143 Query: 141 SQLSGASICV--QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA--HRCDAYTG 196 L+ V + GTT E K FE+ E D A + DA+ Sbjct: 144 EDLNKPEYTVVSRLGTTGEEAAKRMLPKAKYK----SFEK--EADGALEVINGKADAWVY 197 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 D+ + + + + L + PL I +GD ++ N + Sbjct: 198 DMP-FNVVFMAEQGKGKAIHLDKPFTYEPLGFGIKKGDPDFLNFL 241 >gi|17549361|ref|NP_522701.1| substrate-binding periplasmic (PBP) ABC transporter protein [Ralstonia solanacearum GMI1000] gi|17431614|emb|CAD18291.1| probable substrate-binding periplasmic (pbp) abc transporter protein [Ralstonia solanacearum GMI1000] Length = 298 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 49/219 (22%), Positives = 86/219 (39%), Gaps = 6/219 (2%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD---PS-KIQYLP 82 L IK G ++ V F+ + ANG G+ +D C L AI D+ P K+QYL Sbjct: 29 LDHIKATGAIRLAHRESSVPFSYLDANGKPIGYSMDLCMRLVDAIRDNLKRPDLKVQYLQ 88 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + R A+ S + D+ +T+ RE +AF Y ++ GI + Sbjct: 89 VTPATRMDAIMSGKADLECASTNNA--RERREKVAFTIPHYIANGRMLVKTASGIHQLED 146 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G ++ G+ + +A + + E A + A+ D L Sbjct: 147 LRGKTVVSTRGSANGNLVRQLSEAGGLGITVVEAGDHGESFAMLAEGKAQAFAMDDVLLA 206 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +K P+++ I+ P A + + D E+ ++ Sbjct: 207 GMKANAKNPADYAIVGKTQQVVPYAIMLSKNDPEFKKLI 245 >gi|218677477|ref|ZP_03525374.1| extracellular solute-binding protein family 3 [Rhizobium etli CIAT 894] Length = 53 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 21/50 (42%), Positives = 36/50 (72%), Gaps = 2/50 (4%) Query: 292 TKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRG--YNALWSKGGLMYAP 339 + D+ + I+ +GNYGE +DRNLG ++++ + R NALW++GG +Y+P Sbjct: 1 SDDFIAQAIKAVGNYGEAYDRNLGPKTKMYLDRKGTPNALWTQGGAIYSP 50 >gi|322376867|ref|ZP_08051360.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus sp. M334] gi|321282674|gb|EFX59681.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus sp. M334] Length = 279 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 37/153 (24%), Positives = 71/153 (46%), Gaps = 12/153 (7%) Query: 9 ILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 ++ L+ LF T+ + AS +++G + G + V + NG + GFD+D Sbjct: 10 LVSLLTLFLTACTQKASDPKQDNWDKYQEQGTITIGFDNTFVPMGFEEKNGQYTGFDIDL 69 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 +A+S + K+Q+ P++ + LQ+ ID + T R + + I Y Sbjct: 70 AQAVSEKL---GFKVQFQPIDWDMKETELQNGTIDAIWNGYSATDERREKVAFS---IPY 123 Query: 124 FDGQGFIMHKK-KGISSVSQLSGASICVQAGTT 155 + Q ++ KK + I SV + ++ QAG++ Sbjct: 124 MENQQVLVAKKSQQIRSVEDMKDKTLGAQAGSS 156 >gi|188534746|ref|YP_001908543.1| Putative amino acid ABC transporter, substrate binding protein [Erwinia tasmaniensis Et1/99] gi|188029788|emb|CAO97667.1| Putative amino acid ABC transporter, substrate binding protein [Erwinia tasmaniensis Et1/99] Length = 261 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 36/141 (25%), Positives = 68/141 (48%), Gaps = 11/141 (7%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 +A L DI+KRG L+ + F V + +G+D+D L+ + K+Q +P Sbjct: 22 HADQLQDIEKRGVLRVAVPQDFPPFGSVGTDLQPQGYDIDMANYLARQM---KLKLQLVP 78 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLRE--ISLGLAFRPITYFDGQGFIMHKKKG-ISS 139 + + R LQ+ ++D++ + RE I A+ P +F G + ++G + + Sbjct: 79 VTSANRVPYLQTDKVDLVISSLGKNPEREKVIDFSRAYAP--FFLG---VFGPQQGTLKN 133 Query: 140 VSQLSGASICVQAGTTTELTL 160 ++LSG S+ V G ++ L Sbjct: 134 AAELSGKSVGVTRGAVEDMVL 154 >gi|257866174|ref|ZP_05645827.1| extracellular solute-binding protein [Enterococcus casseliflavus EC30] gi|257872505|ref|ZP_05652158.1| extracellular solute-binding protein [Enterococcus casseliflavus EC10] gi|257875809|ref|ZP_05655462.1| extracellular solute-binding protein [Enterococcus casseliflavus EC20] gi|257800108|gb|EEV29160.1| extracellular solute-binding protein [Enterococcus casseliflavus EC30] gi|257806669|gb|EEV35491.1| extracellular solute-binding protein [Enterococcus casseliflavus EC10] gi|257809975|gb|EEV38795.1| extracellular solute-binding protein [Enterococcus casseliflavus EC20] Length = 269 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 47/210 (22%), Positives = 95/210 (45%), Gaps = 13/210 (6%) Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 +T L G ++ A + +GFD+D RA++ I ++ + +K R L++ ID + Sbjct: 48 DTRLFGLMDI-ATREVRGFDIDIARAITEKILGRDGNAIFVEVTSKTRIPLLKNGNIDAI 106 Query: 101 SRNTDWTLLREISLGLAFRPITYFD-GQGFIMHKKKGISSVSQLSG-ASICVQAGTTTEL 158 T+ E + F + YFD GQ ++ K I + L+ ++ V G+T+ + Sbjct: 107 IAT--MTITEERKKQVDFSDV-YFDAGQSLLVAKDSPIQGIEDLTADTTVLVVKGSTSAV 163 Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218 + + + + E E A ++ + DA T D + L L + ++ P+ H++ Sbjct: 164 NI----REAAPEAQILELENYAEAFTALQSGQGDAMTTDNAIL--LGMASENPNYHLV-G 216 Query: 219 DIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 + ++ P AI +G + + V+ M Sbjct: 217 ETFTEEPYGIAINKGQKPFLDAVNQALREM 246 >gi|186685028|ref|YP_001868224.1| extracellular solute-binding protein [Nostoc punctiforme PCC 73102] gi|186467480|gb|ACC83281.1| extracellular solute-binding protein, family 3 [Nostoc punctiforme PCC 73102] Length = 271 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 33/152 (21%), Positives = 71/152 (46%), Gaps = 6/152 (3%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F++S ++ T F+ +A+ + +I++RG+L + L ANG+ +G ++D Sbjct: 23 FWISCFSIV---GTGFTASAAEMPEIQQRGYLTVAVKDNLRPLGFRDANGNLQGLEIDLA 79 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 + L+ + ++ P+ ++R + K++D T R S ++F Y Sbjct: 80 QRLALDLVGKTDAVKLQPVANRDRLSVVLDKKVDFAIARVTATESR--SRIVSFSVPYYL 137 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTT 156 DG ++ K ++ +S L+ I V ++T Sbjct: 138 DG-TVLVTKDASVNKLSDLAKQKIAVLNNSST 168 >gi|288959825|ref|YP_003450165.1| polar amino acid transport system substrate-binding protein [Azospirillum sp. B510] gi|288912133|dbj|BAI73621.1| polar amino acid transport system substrate-binding protein [Azospirillum sp. B510] Length = 277 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 51/197 (25%), Positives = 83/197 (42%), Gaps = 16/197 (8%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L IK+RG L G+ F + A + KGF++D L+ + K++ + + Sbjct: 31 LDRIKQRGSLVAGVILSGAPFGYIDAKSQEQKGFNIDLATELARGLG---VKLETVTVTP 87 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQL 143 R LQ ++D+L N WT E + L F P T F+ G I +KG + L Sbjct: 88 PNRVQFLQQGKVDLLIANMSWT--EERAEMLDFVP-TAFERSGGIALGRKGTPVKDWPDL 144 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA--YTGDISAL 201 G ++C+ G LA+ A +K P + + A + +CDA +TG + Sbjct: 145 KGKTVCLSQGANFTKPLAEEIGA-KIKGFPSQPDSL----LALKGGQCDAAVHTGATLRV 199 Query: 202 YALKLTNDRPSEHVILP 218 L D ++ P Sbjct: 200 MLLDHPEDWKDYEILTP 216 >gi|167836761|ref|ZP_02463644.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia thailandensis MSMB43] Length = 264 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 43/184 (23%), Positives = 78/184 (42%), Gaps = 12/184 (6%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 F + + A +L ++K+RG L+ G+ F G+ GFDVD +A+++ + P Sbjct: 19 FVAATAHAADLLDEVKQRGTLRIGLEGTFPPFNSKNPQGELVGFDVDIAKAVAAKLGVKP 78 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-- 133 +++ LQ+ + D++ T R+ +L F P F I K Sbjct: 79 ---EFVTTEWSGIIAGLQAGKFDVIVNQVGITDQRKQTLD--FSPAYTFSSAQLIQRKDD 133 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 + +S+ L G + V GT + +A ++K +P E + ++ A R DA Sbjct: 134 TRQFTSLEDLKGKKLGVALGTNY-MDMAKSVPGVDVKTYPGAPEYLRDLAAG----RLDA 188 Query: 194 YTGD 197 D Sbjct: 189 ALND 192 >gi|289642305|ref|ZP_06474453.1| extracellular solute-binding protein family 3 [Frankia symbiont of Datisca glomerata] gi|289507837|gb|EFD28788.1| extracellular solute-binding protein family 3 [Frankia symbiont of Datisca glomerata] Length = 286 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 44/193 (22%), Positives = 85/193 (44%), Gaps = 13/193 (6%) Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 GD +GFDV+ + ++ + DP I ++ + +R A+Q ++D + +T+ + Sbjct: 65 GGDVEGFDVEIAKIIADGLGIDPDDITFVETPSAQREGAIQQSRVDFIVAT--YTINDKR 122 Query: 113 SLGLAFRPITYFDGQGFIMHKKK----GISSVSQLSGASICVQAGTTTELTLADYFKAHN 168 ++F Y GQ ++ K G S+ + + A +C +G+T + +Y A N Sbjct: 123 KQLISFAGPYYQAGQDIMVKKDNTTITGPESL-RATNAKVCSVSGSTPAEKIKEYADASN 181 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 + ++F+ + A R + DA T D L L L + I+ + P Sbjct: 182 I----VLFDVYSKCADALRTGQVDAVTTDNVVL--LGLVDASGGAFKIVGKPFTTEPYGI 235 Query: 229 AIIQGDTEWYNIV 241 I +GDT + + Sbjct: 236 GIKKGDTAFCQFI 248 >gi|167587289|ref|ZP_02379677.1| ABC polar amino acid transporter, periplasmic ligand binding protein [Burkholderia ubonensis Bu] Length = 264 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 45/192 (23%), Positives = 84/192 (43%), Gaps = 13/192 (6%) Query: 9 ILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 + LI FT+ + +A+ +L ++K+RG L+ G+ F G+ GFDVD +A+ Sbjct: 11 VAGLIGASFTAATAHAADLLDEVKQRGTLRVGLEGTFPPFNSKSPQGELVGFDVDIAKAV 70 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 ++ + P +++ LQ+ + D+++ T R+ +L F P + Sbjct: 71 AAKLGVKP---EFVTTEWSGIIAGLQAGKFDVIANQVGITDKRKETLD--FSPAYTYSSA 125 Query: 128 GFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 I K + S+ L G + V GT + +A ++K +P E + ++ A Sbjct: 126 QLIQRKDDTRQFKSLEDLKGKKLGVALGTNY-MDMAKSVPGIDVKTYPGAPEYLRDLAAG 184 Query: 186 YRAHRCDAYTGD 197 R DA D Sbjct: 185 ----RLDAALND 192 >gi|307730962|ref|YP_003908186.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1003] gi|307585497|gb|ADN58895.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1003] Length = 297 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 47/227 (20%), Positives = 93/227 (40%), Gaps = 6/227 (2%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDP 75 + + +A L IK G + G + F+ + G+ +F + A+ + P Sbjct: 20 AHAQDAGTLKKIKDTGVISLGHRESSIPFSYYDDKQNVIGYSQEFALKVVEAVKQKLNAP 79 Query: 76 S-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 + K++ +P+ ++ R +Q+ +D+ +T R+ + AF + G + K Sbjct: 80 NLKVKLIPVTSQNRIPLVQNGTVDMECGSTTNNAERQQQV--AFSNTIFVIGTRLMTKKD 137 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 GI + L G ++ AGTT+E L + NM + I + E R A+ Sbjct: 138 SGIKDWADLKGKTVVTTAGTTSERLLRKMNQDKNMGMNIISAKDHGESFLTLSTGRAAAF 197 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 D + L + ++ P + VI+ S + + D E+ +V Sbjct: 198 MMDDALLAGERAKSNNPGDFVIVGAPQSHEAYGCMLRKNDPEFKKVV 244 >gi|322833412|ref|YP_004213439.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602] gi|321168613|gb|ADW74312.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602] Length = 280 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 34/141 (24%), Positives = 60/141 (42%), Gaps = 6/141 (4%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQ 79 S A +L DI+ RG L C + + + F+ G DVD C AL+ + K+ Sbjct: 22 SAKADVLSDIQARGSLNCAVYSDVPPFSSPDPKTRQLAGMDVDLCTALAKQMG---VKLN 78 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P + + R + + + D+L N +T R + F Y + ++ K + Sbjct: 79 LMPTSIEARIAVIATGRADVLIANLAYTKTR--GQQIQFSDPYYVAKEVLVVKKPNVDKT 136 Query: 140 VSQLSGASICVQAGTTTELTL 160 + G I GTT+E ++ Sbjct: 137 RADFKGKRISATKGTTSEQSI 157 >gi|90413901|ref|ZP_01221887.1| hypothetical binding protein component of ABC transporter [Photobacterium profundum 3TCK] gi|90325085|gb|EAS41595.1| hypothetical binding protein component of ABC transporter [Photobacterium profundum 3TCK] Length = 265 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 58/249 (23%), Positives = 109/249 (43%), Gaps = 24/249 (9%) Query: 3 KDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + I+ + L TS + A IL DI K G L+ + G + F NG + GFD+ Sbjct: 2 RKLLSGIVAAVALMSTSAAVTAGPILDDIAKSGELRVCFDAGYMPFEMKSKNGSFIGFDI 61 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFL--ALQSKQIDILSRNTDWTLLREISLGLAFR 119 D + ++ + ++Y+P+N + L + + ++ N T+ + ++ + F Sbjct: 62 DIGKQMARQM-----GVKYVPINTAWDGIIPTLLTGKCHMI--NAGMTINAQRNMRVNFA 114 Query: 120 PITYFDGQGFIMHK--KKGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIV 175 GQ +++ + I+S L+ + +I + GTT E + + V Sbjct: 115 DPYIVIGQSILINPELEGEITSYKDLNDSKYTIATKLGTTGEQAIKRMISKAKLN----V 170 Query: 176 FERVEEIDAAYRAHRCDAYTGDI--SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 FE + + DA+ D+ +A+YA + ND H+ P + PL AI QG Sbjct: 171 FETQSDAVLEVANGKADAFIYDMPFNAIYASQ--NDGKVIHLEQP--FTYEPLGWAIAQG 226 Query: 234 DTEWYNIVS 242 D++ N ++ Sbjct: 227 DSDMLNFLN 235 >gi|167904262|ref|ZP_02491467.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei NCTC 13177] Length = 300 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 48/215 (22%), Positives = 87/215 (40%), Gaps = 11/215 (5%) Query: 12 LIILFFTSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 L++ ++F+ A L IK G + G + F+ N G+ DF Sbjct: 11 LMVAALSTFAGGAIAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGYSRDFQMK 70 Query: 67 LSSAI---FDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + A+ + P+ +++ +P+ ++ R +Q+ +DI +T L R+ AF Sbjct: 71 VVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLDRQKQA--AFSDTI 128 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 + G + K GI + L G ++ AGTT+E L + + M I + E Sbjct: 129 FVIGTRLMTKKDSGIKDFADLKGKTVVTTAGTTSERLLREMNNKNQMGMSIISAKDHGES 188 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 R A+ D + L + +P E VI+ Sbjct: 189 FQTLETGRAVAFMMDDALLAGERAKAKQPGEWVII 223 >gi|227431443|ref|ZP_03913492.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227352809|gb|EEJ42986.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 288 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 65/271 (23%), Positives = 114/271 (42%), Gaps = 30/271 (11%) Query: 9 ILCLIILFFTSFSTNAS--------ILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKG 58 +L +I+ ++T A+ L ++K G + G+ +T L G + K G KG Sbjct: 16 VLAAVIVLGLLWATTAAKKNEEHQDTLQRVEKLGRIIWGVKSDTKLFGLMDTK-TGVSKG 74 Query: 59 FDVDFCRALSSAIFDD---PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 FDVD +AL+ I P +++P+++ + L++ ID T RE ++ Sbjct: 75 FDVDIAKALTVQISKQTGVPMSAEFVPVSSSSKIQLLKNTNIDGTVSTMTITPEREKNID 134 Query: 116 LAFRPITYFD-GQGFIMHKKKGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYH 172 + YFD GQ ++ K GI S+ ++ + I V GTT A+ K K Sbjct: 135 FTNQ---YFDAGQSILVKKDSGIKSIKDMNDSKYKIIVVVGTTA----AEETKKFAPKAK 187 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + + A +A + A + D + LY N ++ I+ + P A Sbjct: 188 LLAVQDYATGMQALKAGQGQAMSTDNAILYGFATEN---PDYQIVGGTFTHGPYGIAF-- 242 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 D +V T+ A+ T ++ G K I + Sbjct: 243 -DNNQGPMVRETNKALATIKKNGTYNKLIKK 272 >gi|296392570|ref|YP_003657454.1| family 3 extracellular solute-binding protein [Segniliparus rotundus DSM 44985] gi|296179717|gb|ADG96623.1| extracellular solute-binding protein family 3 [Segniliparus rotundus DSM 44985] Length = 335 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 33/136 (24%), Positives = 64/136 (47%), Gaps = 12/136 (8%) Query: 27 LGDIKKRGFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L I +RG L G++ G F+ A G KGFDV R ++ + DP+++ Y +++ Sbjct: 82 LDRILQRGKLVVGLDQGTYPFSYRDSATGQMKGFDVAMAREIAQGMLGDPNRVDYRIISS 141 Query: 86 KERFLALQSKQIDIL--SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG----ISS 139 R AL++ +DI+ + + + ++EI+ YF+ +M ++ Sbjct: 142 AGRTTALENDSVDIVIKTMSINCKRMKEITFSEP-----YFETDQRVMAATNANATTLAD 196 Query: 140 VSQLSGASICVQAGTT 155 L +++C G+T Sbjct: 197 RKILGESTVCAARGST 212 >gi|254389483|ref|ZP_05004710.1| glutamate binding periplasmic protein [Streptomyces clavuligerus ATCC 27064] gi|294815860|ref|ZP_06774503.1| Putative glutamate ABC transporter substrate-binding protein [Streptomyces clavuligerus ATCC 27064] gi|326444202|ref|ZP_08218936.1| putative glutamate ABC transporter substrate-binding protein [Streptomyces clavuligerus ATCC 27064] gi|197703197|gb|EDY49009.1| glutamate binding periplasmic protein [Streptomyces clavuligerus ATCC 27064] gi|294328459|gb|EFG10102.1| Putative glutamate ABC transporter substrate-binding protein [Streptomyces clavuligerus ATCC 27064] Length = 301 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 3/105 (2%) Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 A G + GFD++ R +S+++ DP++I ++ + + R ALQ+ QID R+ Sbjct: 79 ATGLYSGFDIEIARMVSASLGLDPARISFVTIASANRETALQNGQIDYYVGTYTINDNRK 138 Query: 112 ISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTT 155 +G A Y GQ ++ K + I L+G +C G+T Sbjct: 139 KLVGFAGP--YYMAGQDLLVRKDETDIKGPEDLAGKRVCSATGST 181 >gi|73540102|ref|YP_294622.1| extracellular solute-binding protein [Ralstonia eutropha JMP134] gi|72117515|gb|AAZ59778.1| extracellular solute-binding protein, family 3 [Ralstonia eutropha JMP134] Length = 302 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 43/198 (21%), Positives = 87/198 (43%), Gaps = 12/198 (6%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQYLP 82 L IK G + G T + F+ +N GF D C + + + + P+ +++ +P Sbjct: 33 LSKIKSSGTISIGHRTSSIPFSYYDSNQKVIGFSQDLCDRVVNEVKKQTNQPNLQVRMVP 92 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R +Q+ +D+ T T L+ +AF + G ++ K + S Sbjct: 93 VTSQNRISLVQNGTVDLECGVT--TNLKSRQQQVAFSTTFFVAGTRLLVKKGSPVHDFSD 150 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY---RAHRCDAYTGDIS 199 LSG ++ AGTT+E L + ++ K I + ++ ++ ++ R A+ D Sbjct: 151 LSGKAVVTNAGTTSERILR---RLNDEKKANITIQSAKDYGESFLILQSGRVAAFMMDDV 207 Query: 200 ALYALKLTNDRPSEHVIL 217 L + P+E V++ Sbjct: 208 LLSGARTLAPNPAEWVVV 225 >gi|114763147|ref|ZP_01442573.1| hypothetical protein 1100011001313_R2601_05783 [Pelagibaca bermudensis HTCC2601] gi|114544200|gb|EAU47209.1| hypothetical protein R2601_05783 [Roseovarius sp. HTCC2601] Length = 269 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 17/185 (9%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 L+ G N G V + +G++ GF+V+ A++S + + +I +P N F A+QS Sbjct: 34 LEVGANIGNVPWEFQDESGEFVGFEVELANAVASQLGRE-VEIVNIPFNG--LFSAVQSG 90 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 +ID+ + T R S+ A +P Y+D + +G +S+ ++ + V G+T Sbjct: 91 RIDMAMSSITITDERLQSVSFA-QP--YYDSDQSLTVGAEGPASLDEMKDKVVGVDTGST 147 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAY---RAHRCDAYTGDISAL-YALKLTNDRP 211 ++ + H Y R E + A A R D Y DI AL Y +K D+P Sbjct: 148 GDM----WATEHAEDYGFADIRRYEGLQPAMLDLTAGRIDGYISDIPALQYYVK---DKP 200 Query: 212 SEHVI 216 + V+ Sbjct: 201 ALEVV 205 >gi|86605397|ref|YP_474160.1| cystine ABC transporter, cystine-binding protein [Synechococcus sp. JA-3-3Ab] gi|86553939|gb|ABC98897.1| cystine ABC transporter, cystine-binding protein [Synechococcus sp. JA-3-3Ab] Length = 287 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 32/143 (22%), Positives = 58/143 (40%), Gaps = 19/143 (13%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 + + +L +++RG L+ ++ + + +G W+GFDVD R ++ Sbjct: 30 LAQGSDLLAQVQERGVLRVSTDSNYRPQSYLNPDGSWEGFDVDVAREIAKR--------- 80 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDW-------TLLREISLGLAFRPITYFDGQGFIMH 132 L K FL + I S N W T+ E L F Y+ F++H Sbjct: 81 ---LGVKAEFLDINFDVITAGSWNGRWDVNVGSMTVTAERQKALLFTIPYYYTPASFVVH 137 Query: 133 KKKGISSVSQLSGASICVQAGTT 155 + ++ ++ L G + V TT Sbjct: 138 QASTLTDIAALEGKRVGVGTATT 160 >gi|221198481|ref|ZP_03571527.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia multivorans CGD2M] gi|221208569|ref|ZP_03581570.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia multivorans CGD2] gi|221171560|gb|EEE04006.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia multivorans CGD2] gi|221182413|gb|EEE14814.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia multivorans CGD2M] Length = 301 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 42/195 (21%), Positives = 77/195 (39%), Gaps = 6/195 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQYLP 82 L I++ + G V F+ V ANG GF D C + +A+ K ++++P Sbjct: 32 LEKIRQNNLISIGHRETSVPFSYVDANGKVIGFSQDLCDRVIAAVKARTGKPDLQVRFIP 91 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R +Q+ +D+ T R +AF + + + GI Sbjct: 92 VTSQNRIPLVQNGTVDLECGVTTNLAARHAQ--VAFSTTFFVATTRLLTRTQSGIRDFPD 149 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+G ++ GTT+E L + M I + E + R AY D L Sbjct: 150 LAGKTVVTNQGTTSERLLRKMNEEKKMNMQIISAKDYGEGRLTLESGRAVAYMMDDVLLA 209 Query: 203 ALKLTNDRPSEHVIL 217 ++ +P++ I+ Sbjct: 210 GVRQLAAKPADWQIV 224 >gi|295396899|ref|ZP_06807023.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Aerococcus viridans ATCC 11563] gi|294974833|gb|EFG50536.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Aerococcus viridans ATCC 11563] Length = 484 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 51/190 (26%), Positives = 85/190 (44%), Gaps = 15/190 (7%) Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 +G+ GFD+D A++ +++ P++ + L S ID++ T RE Sbjct: 57 GSGELVGFDIDLANAVADLY---GWNLEFQPIDWVMKETELNSGNIDMIWNGYGITPERE 113 Query: 112 ISLGLAFRPITYFD-GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK--AHN 168 + L P Y + GQ I K I +S L+G +I Q+G+T+ + ++ + Sbjct: 114 -EMVLFSEP--YIESGQMVISKKGSDIDELSDLAGKTIATQSGSTSLTFMQEWPDDLYNQ 170 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDA-YTGDISALYAL--KLTNDRPSEHVILPDIISKSP 225 + P+++ E+ A A R DA Y GDI + Y L K T D E+ D S P Sbjct: 171 LADEPVLYPSYNEVFADLDADRVDAIYAGDIYSRYTLNQKGTLD---EYEYFVDETSIEP 227 Query: 226 LAPAIIQGDT 235 + + DT Sbjct: 228 MGVGFRKSDT 237 >gi|167580590|ref|ZP_02373464.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia thailandensis TXDOH] gi|167618697|ref|ZP_02387328.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia thailandensis Bt4] gi|257137940|ref|ZP_05586202.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia thailandensis E264] Length = 297 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 48/215 (22%), Positives = 87/215 (40%), Gaps = 11/215 (5%) Query: 12 LIILFFTSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 L++ ++F+ A L IK G + G + F+ N G+ DF Sbjct: 8 LMVAALSTFAGGAIAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGYSRDFQMK 67 Query: 67 LSSAI---FDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + A+ + P+ +++ +P+ ++ R +Q+ +DI +T L R+ AF Sbjct: 68 VVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLDRQKQA--AFSDTI 125 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 + G + K GI + L G ++ AGTT+E L + + M I + E Sbjct: 126 FVIGTRLMTKKDSGIKDFADLKGKTVVTTAGTTSERLLREMNNKNQMGMSIISAKDHGES 185 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 R A+ D + L + +P E VI+ Sbjct: 186 FQTLETGRAVAFMMDDALLAGERAKAKQPGEWVIV 220 >gi|76808998|ref|YP_334805.1| glutamate/aspartate periplasmic binding protein [Burkholderia pseudomallei 1710b] gi|167721209|ref|ZP_02404445.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei DM98] gi|167740181|ref|ZP_02412955.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 14] gi|167817396|ref|ZP_02449076.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 91] gi|167825802|ref|ZP_02457273.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 9] gi|167895874|ref|ZP_02483276.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 7894] gi|167912523|ref|ZP_02499614.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 112] gi|167920474|ref|ZP_02507565.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei BCC215] gi|254190906|ref|ZP_04897412.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei Pasteur 52237] gi|76578451|gb|ABA47926.1| glutamate/aspartate periplasmic binding protein precursor [Burkholderia pseudomallei 1710b] gi|157938580|gb|EDO94250.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei Pasteur 52237] Length = 297 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 48/215 (22%), Positives = 87/215 (40%), Gaps = 11/215 (5%) Query: 12 LIILFFTSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 L++ ++F+ A L IK G + G + F+ N G+ DF Sbjct: 8 LMVAALSTFAGGAIAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGYSRDFQMK 67 Query: 67 LSSAI---FDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + A+ + P+ +++ +P+ ++ R +Q+ +DI +T L R+ AF Sbjct: 68 VVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLDRQKQA--AFSDTI 125 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 + G + K GI + L G ++ AGTT+E L + + M I + E Sbjct: 126 FVIGTRLMTKKDSGIKDFADLKGKTVVTTAGTTSERLLREMNNKNQMGMSIISAKDHGES 185 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 R A+ D + L + +P E VI+ Sbjct: 186 FQTLETGRAVAFMMDDALLAGERAKAKQPGEWVIV 220 >gi|254199128|ref|ZP_04905543.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei S13] gi|254261815|ref|ZP_04952869.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 1710a] gi|169656958|gb|EDS88355.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei S13] gi|254220504|gb|EET09888.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 1710a] Length = 363 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 56/257 (21%), Positives = 102/257 (39%), Gaps = 14/257 (5%) Query: 12 LIILFFTSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 L++ ++F+ A L IK G + G + F+ N G+ DF Sbjct: 74 LMVAALSTFAGGAIAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGYSRDFQMK 133 Query: 67 LSSAI---FDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + A+ + P+ +++ +P+ ++ R +Q+ +DI +T L R+ AF Sbjct: 134 VVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLDRQKQA--AFSDTI 191 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 + G + K GI + L G ++ AGTT+E L + + M I + E Sbjct: 192 FVIGTRLMTKKDSGIKDFADLKGKTVVTTAGTTSERLLREMNNKNQMGMSIISAKDHGES 251 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 R A+ D + L + +P E VI+ S+ + + D + +V Sbjct: 252 FQTLETGRAVAFMMDDALLAGERAKAKQPGEWVIVGKPQSQEAYGCMMRKDDPAFKKVVD 311 Query: 243 WTHYAMVTAEELGITQK 259 A+V E+ G K Sbjct: 312 ---DAIVQVEKSGEAAK 325 >gi|53720532|ref|YP_109518.1| glutamate/aspartate periplasmic binding protein precursor [Burkholderia pseudomallei K96243] gi|52210946|emb|CAH36934.1| glutamate/aspartate periplasmic binding protein precursor [Burkholderia pseudomallei K96243] Length = 300 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 48/215 (22%), Positives = 87/215 (40%), Gaps = 11/215 (5%) Query: 12 LIILFFTSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 L++ ++F+ A L IK G + G + F+ N G+ DF Sbjct: 11 LMVAALSTFAGGAIAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGYSRDFQMK 70 Query: 67 LSSAI---FDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + A+ + P+ +++ +P+ ++ R +Q+ +DI +T L R+ AF Sbjct: 71 VVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLDRQKQA--AFSDTI 128 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 + G + K GI + L G ++ AGTT+E L + + M I + E Sbjct: 129 FVIGTRLMTKKDSGIKDFADLKGKTVVTTAGTTSERLLREMNNKNQMGMSIISAKDHGES 188 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 R A+ D + L + +P E VI+ Sbjct: 189 FQTLETGRAVAFMMDDALLAGERAKAKQPGEWVIV 223 >gi|186682620|ref|YP_001865816.1| extracellular solute-binding protein [Nostoc punctiforme PCC 73102] gi|186465072|gb|ACC80873.1| extracellular solute-binding protein, family 3 [Nostoc punctiforme PCC 73102] Length = 734 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 1/69 (1%) Query: 27 LGDIKKRGFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L I+ RG+L + + GF G++ G ++D R ++ IF DPSK++++ ++ Sbjct: 470 LRRIQDRGYLVVAVKENVPGFGYRDPKTGEFSGLEIDLARLIAKQIFGDPSKVKFVAVST 529 Query: 86 KERFLALQS 94 ++R L+S Sbjct: 530 QQRLPVLRS 538 >gi|298293081|ref|YP_003695020.1| extracellular solute-binding protein family 3 [Starkeya novella DSM 506] gi|296929592|gb|ADH90401.1| extracellular solute-binding protein family 3 [Starkeya novella DSM 506] Length = 265 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 42/155 (27%), Positives = 68/155 (43%), Gaps = 10/155 (6%) Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 E + +G GF+VD A+ + + +I ++ + E AL +ID+ + T Sbjct: 45 EFREDGHLVGFEVDLIEAIGTRLG---MRIDFVGMAFGELLPALAGDRIDVAMCSMSITP 101 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168 R F Y QG ++ K + S+ L+G + +AG+T E L+D + Sbjct: 102 ERRRRFD--FTQPYYRTSQGMVVMKSARVRSLEDLAGKRVGTEAGSTNEQWLSDNRARYG 159 Query: 169 M-KYHPIV-FERVEEIDAAYRAHRCDAYTGDISAL 201 P+V ER E+ A DAY GD+ AL Sbjct: 160 FGPTVPVVGLERALEL---LSAGEIDAYFGDLPAL 191 >gi|126439062|ref|YP_001060407.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 668] gi|126452231|ref|YP_001067668.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 1106a] gi|134280250|ref|ZP_01766961.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 305] gi|217420638|ref|ZP_03452143.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 576] gi|226196796|ref|ZP_03792375.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei Pakistan 9] gi|237813798|ref|YP_002898249.1| glutamate/aspartate periplasmic-binding protein [Burkholderia pseudomallei MSHR346] gi|242316081|ref|ZP_04815097.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 1106b] gi|254180661|ref|ZP_04887259.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 1655] gi|254299254|ref|ZP_04966704.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 406e] gi|126218555|gb|ABN82061.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 668] gi|126225873|gb|ABN89413.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 1106a] gi|134248257|gb|EBA48340.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 305] gi|157809157|gb|EDO86327.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 406e] gi|184211200|gb|EDU08243.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 1655] gi|217396050|gb|EEC36067.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 576] gi|225931056|gb|EEH27064.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei Pakistan 9] gi|237504398|gb|ACQ96716.1| glutamate/aspartate periplasmic-binding protein [Burkholderia pseudomallei MSHR346] gi|242139320|gb|EES25722.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 1106b] Length = 328 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 56/257 (21%), Positives = 102/257 (39%), Gaps = 14/257 (5%) Query: 12 LIILFFTSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 L++ ++F+ A L IK G + G + F+ N G+ DF Sbjct: 39 LMVAALSTFAGGAIAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGYSRDFQMK 98 Query: 67 LSSAI---FDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + A+ + P+ +++ +P+ ++ R +Q+ +DI +T L R+ AF Sbjct: 99 VVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLDRQKQA--AFSDTI 156 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 + G + K GI + L G ++ AGTT+E L + + M I + E Sbjct: 157 FVIGTRLMTKKDSGIKDFADLKGKTVVTTAGTTSERLLREMNNKNQMGMSIISAKDHGES 216 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 R A+ D + L + +P E VI+ S+ + + D + +V Sbjct: 217 FQTLETGRAVAFMMDDALLAGERAKAKQPGEWVIVGKPQSQEAYGCMMRKDDPAFKKVVD 276 Query: 243 WTHYAMVTAEELGITQK 259 A+V E+ G K Sbjct: 277 ---DAIVQVEKSGEAAK 290 >gi|83718416|ref|YP_441772.1| glutamate/aspartate ABC transporter periplasmic glutamate/aspartate-binding protein [Burkholderia thailandensis E264] gi|83652241|gb|ABC36304.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia thailandensis E264] Length = 298 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 48/215 (22%), Positives = 87/215 (40%), Gaps = 11/215 (5%) Query: 12 LIILFFTSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 L++ ++F+ A L IK G + G + F+ N G+ DF Sbjct: 9 LMVAALSTFAGGAIAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGYSRDFQMK 68 Query: 67 LSSAI---FDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + A+ + P+ +++ +P+ ++ R +Q+ +DI +T L R+ AF Sbjct: 69 VVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLDRQKQA--AFSDTI 126 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 + G + K GI + L G ++ AGTT+E L + + M I + E Sbjct: 127 FVIGTRLMTKKDSGIKDFADLKGKTVVTTAGTTSERLLREMNNKNQMGMSIISAKDHGES 186 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 R A+ D + L + +P E VI+ Sbjct: 187 FQTLETGRAVAFMMDDALLAGERAKAKQPGEWVIV 221 >gi|21228041|ref|NP_633963.1| glutamine-binding protein [Methanosarcina mazei Go1] gi|20906474|gb|AAM31635.1| Glutamine-binding protein [Methanosarcina mazei Go1] Length = 284 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 10/131 (7%) Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F V + G GFDVD A++ D K+QYL + ALQ+ IDI++ Sbjct: 71 FEIVDSRGKVVGFDVDLLNAIAE---DQGFKVQYLDQDFAGLIPALQTGNIDIIASGMTI 127 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T RE + + IT ++ ++ I SV+ L G ++ VQ G+T + KA Sbjct: 128 TEEREQEVDFSEPYITAGLALAVPINNEE-IQSVADLQGKTVAVQTGST------GFMKA 180 Query: 167 HNMKYHPIVFE 177 +K ++ E Sbjct: 181 EELKEAGVIAE 191 >gi|54308668|ref|YP_129688.1| hypothetical protein PBPRA1475 [Photobacterium profundum SS9] gi|46913097|emb|CAG19886.1| hypothetical binding protein component ofABC transporter [Photobacterium profundum SS9] Length = 265 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 58/243 (23%), Positives = 108/243 (44%), Gaps = 24/243 (9%) Query: 9 ILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 I+ + L TS + A IL DI K G L+ + G + F NG + GFD+D + + Sbjct: 8 IVAAVALMSTSAAVTAGPILDDIAKSGELRVCFDAGYMPFEMKSKNGSFIGFDIDIGKQM 67 Query: 68 SSAIFDDPSKIQYLPLNAKERFL--ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 + + ++Y+P+N + L + + ++ N T+ + ++ + F Sbjct: 68 ARQM-----GVKYVPINTAWDGIIPTLLTGKCHMI--NAGMTINAQRNMRVNFADPYIVI 120 Query: 126 GQGFIMHK--KKGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 GQ +++ + I+S L+ + +I + GTT E + + VFE + Sbjct: 121 GQSILINPELEGEITSYKDLNDSKYTIATKLGTTGEQAIKRMISKAKLN----VFETQSD 176 Query: 182 IDAAYRAHRCDAYTGDI--SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + DA+ D+ +A+YA + ND H+ P + PL AI QGD++ N Sbjct: 177 AVLEVANGKADAFIYDMPFNAIYASQ--NDGKVIHLEQP--FTYEPLGWAIAQGDSDMLN 232 Query: 240 IVS 242 ++ Sbjct: 233 FLN 235 >gi|326318773|ref|YP_004236445.1| family 3 extracellular solute-binding protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375609|gb|ADX47878.1| extracellular solute-binding protein family 3 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 300 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 52/240 (21%), Positives = 102/240 (42%), Gaps = 7/240 (2%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS-- 76 +F+ + L IK G + G+ G + +G + GF D C + + + Sbjct: 18 AFAQSNDTLAKIKASGTITEGVRES-SGLSYTLGDGKYTGFHYDVCARVIADVQKQLGLA 76 Query: 77 --KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 + +Y P+ ++ R +Q+ +DI +T R+ + AF TY + + Sbjct: 77 KLETKYQPVTSQNRIPLVQNGTVDIECGSTTNNQARQKDV--AFAVTTYVEEVRIAVKAN 134 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 GIS + L+G +I GTT+ TL +A + + + + + + R DA+ Sbjct: 135 SGISGIKDLNGKTIATTTGTTSVQTLRKNKRADGLTFKEVFGKDHSDSFLLLESGRADAF 194 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D S L + + P++ I+ + +S P+A I + D + V + M+ + E+ Sbjct: 195 IMDGSILASNIAKSKAPNDFKIVGETLSVEPIAIMIRKDDPAFKKAVDDSLKGMMKSGEM 254 >gi|300172544|ref|YP_003771709.1| glutamine-binding protein [Leuconostoc gasicomitatum LMG 18811] gi|299886922|emb|CBL90890.1| glutamine-binding protein [Leuconostoc gasicomitatum LMG 18811] Length = 288 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 81/170 (47%), Gaps = 16/170 (9%) Query: 6 FVSILCLIILFFTSFST-NAS---ILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGF 59 V+++ L +++ T+ + NA L ++K G + G+ +T L G + K G +GF Sbjct: 17 LVAVIVLGLMWATATANRNAEHQDTLARVEKLGRIVWGVKADTRLFGLMDTK-TGISQGF 75 Query: 60 DVDFCRALSSAIFDD---PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 D+D RAL+ I P +++P++ + L++ ID T RE + Sbjct: 76 DIDIARALTVQISKQTGVPMSAEFVPVSTASKMQLLKNTNIDGSVSTMTITPEREKIIDF 135 Query: 117 AFRPITYFD-GQGFIMHKKKGISSVSQLSGA--SICVQAGTTTELTLADY 163 + YFD GQ ++ K GI+S+ ++ + +I V GTT A + Sbjct: 136 TNQ---YFDAGQSILVKKDSGINSIKDMNSSKYTIIVVVGTTAATETAKF 182 >gi|302540998|ref|ZP_07293340.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Streptomyces hygroscopicus ATCC 53653] gi|302458616|gb|EFL21709.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Streptomyces himastatinicus ATCC 53653] Length = 274 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 56/242 (23%), Positives = 98/242 (40%), Gaps = 26/242 (10%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L + + G L+ F +GFDVD +A++ A+ K++ + Sbjct: 41 STLQKVTRSGTLRVASCLTFPPFGSTDKANKPQGFDVDVAKAMAKALG---VKVKIVDTT 97 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 + R L++ ++D + N +T E + +AF G+ ++ K I+S+ LS Sbjct: 98 SANRIPNLRTHKVDAVVCN--FTTTAERAKQVAFSDPYIVAGEVLMVKKSSAIASLKDLS 155 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA------AYRAHRCDAYTGDI 198 G + V G+T + K N K R++E D A + + DA D Sbjct: 156 GKKVAVTKGSTNGAAV----KEGNPK------ARIQEYDTSAAAVLAVKQGQADAMVEDS 205 Query: 199 SAL-YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN-IVSWTHYAMVTAEELGI 256 + L Y KL PS V ++ A + QGD +W I +W + + + Sbjct: 206 NFLNYQAKLD---PSLKVTKDSVVPLEYNAIGVGQGDPDWLQWINTWLREFNTSGQSAAL 262 Query: 257 TQ 258 T+ Sbjct: 263 TR 264 >gi|323527327|ref|YP_004229480.1| family 3 extracellular solute-binding protein [Burkholderia sp. CCGE1001] gi|323384329|gb|ADX56420.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1001] Length = 297 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 49/239 (20%), Positives = 97/239 (40%), Gaps = 6/239 (2%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDP 75 + + +A L IK G + G + F+ + G+ +F + A+ + P Sbjct: 20 AHAQDAGTLKKIKDTGVISLGHRESSIPFSYYDDKQNVIGYSQEFALKVVDAVKQKLNAP 79 Query: 76 S-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 + K++ +P+ ++ R +Q+ +D+ +T R+ + AF + G + K Sbjct: 80 NLKVKLIPVTSQNRIPLVQNGTVDMECGSTTNNAERQQQV--AFSNTIFVIGTRLMTKKD 137 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 GI + L G ++ AGTT+E L + NM + I + E R A+ Sbjct: 138 SGIKDWADLKGKTVVTTAGTTSERLLRKMNQDKNMGMNIISAKDHGESFLTLSTGRAAAF 197 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 D + L + ++ P + VI+ S + + D E+ +V + T+ E Sbjct: 198 MMDDALLAGERAKSNNPGDFVIVGAPQSHEAYGCMLRKNDPEFKKVVDEAIAKVETSGE 256 >gi|111017250|ref|YP_700222.1| ABC amino acid transporter, periplasmic substrate binding protein [Rhodococcus jostii RHA1] gi|110816780|gb|ABG92064.1| ABC amino acid transporter, periplasmic substrate binding protein [Rhodococcus jostii RHA1] Length = 329 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 32/127 (25%), Positives = 55/127 (43%), Gaps = 5/127 (3%) Query: 27 LGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 LGDI+ RG + + NT L F + G GF VD R ++ + DP+K+++ PL Sbjct: 87 LGDIRARGTVVVAVDQNTNLFSFRD-PTTGTLTGFGVDLAREVARDLLGDPTKVEFRPLG 145 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 + L + D++ R L + L F + + ++ GIS + L+ Sbjct: 146 TDDGAEMLADRDADMVVRPV--ALPCQGLQDLTFSTVYLEASRRLVVRDGSGISGPADLA 203 Query: 145 GASICVQ 151 +C Sbjct: 204 RRRVCTH 210 >gi|171319564|ref|ZP_02908662.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MEX-5] gi|171095209|gb|EDT40203.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MEX-5] Length = 306 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 42/195 (21%), Positives = 77/195 (39%), Gaps = 6/195 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQYLP 82 L I++ G + G V F+ V A+G GF D C + +A+ K ++++P Sbjct: 37 LEKIRQAGLISIGHRETSVPFSYVDASGKVIGFSQDLCDRVIAAVKARTGKPDLQVRFIP 96 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R +Q+ +D+ T R +AF + + GI Sbjct: 97 VTSQNRIPLVQNGTVDLECGVTTNLAARHAQ--VAFSTTFFVATTRLLTRTSSGIRDFHD 154 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+G ++ GTT+E L + M I + E + R AY D L Sbjct: 155 LAGKTVVTNQGTTSERLLRKMNEEKKMNMQIISAKDYGEGRLTLESGRAAAYMMDDVLLA 214 Query: 203 ALKLTNDRPSEHVIL 217 ++ +P++ I+ Sbjct: 215 GVRQLAAKPADWAIV 229 >gi|218662937|ref|ZP_03518867.1| putative substrate-binding component of ABC transporter [Rhizobium etli IE4771] Length = 171 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 2/122 (1%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 L + L T S L ++ RG L G + + + +GFDVD R ++ Sbjct: 12 LVAVALLSTPVLAEGSKLDEVLARGHLVLGTGSTNAPWHFKSEDDKLQGFDVDMGRIIAK 71 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 A+F DP KI+Y+ ++ R + + ++DI + T+ E + +AF Y +G G Sbjct: 72 ALFGDPEKIEYVNQSSDARIPNITTDKVDITCQF--MTVTGERAQQVAFTIPYYREGVGL 129 Query: 130 IM 131 ++ Sbjct: 130 ML 131 >gi|326318774|ref|YP_004236446.1| family 3 extracellular solute-binding protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375610|gb|ADX47879.1| extracellular solute-binding protein family 3 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 296 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 49/253 (19%), Positives = 95/253 (37%), Gaps = 14/253 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V+ LC + +++A +L I G L FA A G G+ V+ C+ Sbjct: 13 VASLCCAV------ASHAGVLDRIASGGKLVVAYRDAASPFAFKDAGGRPAGYAVELCQR 66 Query: 67 LSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDI-LSRNTDWTLLREISLGLAFRPI 121 ++ A+ + + YLP++ R A+ + D+ T+ R+I +AF Sbjct: 67 IADAVRRKTGRKDMEVAYLPVDLDNRMEAITQGRADLECGSTTNNAERRQI---VAFTIP 123 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + G ++ I + + G + GTT + + ++ + I + Sbjct: 124 HFITGTRLLVKASSPIDRIEDMGGHKLVSTRGTTALRAVQQLNRERALQINVIEAPDDQR 183 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 DA+ D LYA P ++ ++ LA + +GD E+ +V Sbjct: 184 AVDMVEKGEADAFAMDDVLLYAFAAGRPDPKALKVVGKFVTAEALAIMLPKGDPEFKKVV 243 Query: 242 SWTHYAMVTAEEL 254 ++T E+ Sbjct: 244 DDEMRRLITTREI 256 >gi|282866759|ref|ZP_06275798.1| extracellular solute-binding protein family 3 [Streptomyces sp. ACTE] gi|282558387|gb|EFB63950.1| extracellular solute-binding protein family 3 [Streptomyces sp. ACTE] Length = 344 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 34/140 (24%), Positives = 67/140 (47%), Gaps = 10/140 (7%) Query: 21 STNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 S + + I++RG L G+ N+ G+ + + +GFD+D RAL+ I D + Sbjct: 75 SADGPTIQKIRERGKLIAGVDQNSFRWGYRDPETR-TLEGFDIDLVRALAKDILGDADAV 133 Query: 79 QYLPLNAKERFLALQSKQIDILSRNT--DWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 + + +R AL+ ++D++ R + L ++S A+ + GQ + K+ Sbjct: 134 IFRAIPTNQRIAALEHDRVDVVVRTMTINCGRLEQVSFSTAY----FQAGQQVLAAKESD 189 Query: 137 ISSVSQ-LSGASICVQAGTT 155 I+ + L+G +C G+T Sbjct: 190 ITGYDRSLAGKRVCSAEGST 209 >gi|295677664|ref|YP_003606188.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] gi|295437507|gb|ADG16677.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] Length = 297 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 44/203 (21%), Positives = 84/203 (41%), Gaps = 6/203 (2%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDP 75 + + ++ L IK G + G + F+ + G+ D+ + A+ + P Sbjct: 20 AHAQDSGTLKKIKDTGVISLGHRESSIPFSYYDDKQNVIGYSQDYAVKIVEAVKQKLNMP 79 Query: 76 S-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 + K++ +P+ ++ R +Q+ +DI +T L R+ AF + G + K Sbjct: 80 NLKVKLVPVTSQNRIPLVQNGTVDIECGSTTNNLERQQQA--AFTNTIFVIGTRLMTKKD 137 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 GI L G ++ AGTT+E L + NM + I + E R A+ Sbjct: 138 SGIKDFPDLKGKTVVTTAGTTSERLLRKMNQDKNMGMNIISAKDHGESFLTLSTGRAAAF 197 Query: 195 TGDISALYALKLTNDRPSEHVIL 217 D + L + + P++ VI+ Sbjct: 198 MMDDALLAGERAKSSNPNDFVIV 220 >gi|258540197|ref|YP_003174696.1| amino acid ABC transporter substrate-binding periplasmic protein [Lactobacillus rhamnosus Lc 705] gi|257151873|emb|CAR90845.1| ABC transporter, amino acid-binding periplasmic protein [Lactobacillus rhamnosus Lc 705] Length = 274 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 51/215 (23%), Positives = 85/215 (39%), Gaps = 35/215 (16%) Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 +T L G +K G +GFDVD +A++ I Q + + + R ++ +D + Sbjct: 50 DTRLFGLMNIKT-GKIEGFDVDMAKAITKQILGKKGNAQLVQVTSDTRVPMIKGGNLDAV 108 Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS--ICVQ------- 151 T+ E L F + + GQ ++ K I SV L + I VQ Sbjct: 109 IAT--MTITPERQKILDFSDVYFNAGQSLLVKKGSPIKSVKDLKKGTKVIGVQGSNSVDN 166 Query: 152 ----AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 A TT L LADY +A A ++ + DA T D LY + Sbjct: 167 VKKAAPDTTVLQLADYAQAF----------------TALKSGQGDALTTDNGILYGM--- 207 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 +++ +++ +K P AI +G + V+ Sbjct: 208 SEQDKNYIVTGGTFTKEPYGIAINKGQKPFVKAVN 242 >gi|104773644|ref|YP_618624.1| glutamine ABC transporter, glutamine-binding protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103422725|emb|CAI97352.1| Glutamine ABC transporter, glutamine-binding protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 281 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 53/235 (22%), Positives = 104/235 (44%), Gaps = 17/235 (7%) Query: 10 LCLIILFFT--SFSTNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCR 65 + L+ L FT S S ++S +K+ + G+ +T L +V + G GF+VD R Sbjct: 14 VLLLSLVFTACSHSQSSSTYDRVKQTNTITWGMRADTRLFSMMDVDS-GKATGFEVDLAR 72 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQID-ILSRNTDWTLLREISLGLAFRPITYF 124 A++ I K++ ++ K R + L+ +D +++ T+ R+I + F + Sbjct: 73 AITKQILGPKGKMKIEYISEKSRIMDLKIGNVDAVMATMTNTPDRRKI---INFSDTYFM 129 Query: 125 DGQGFIMHKKKGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 G+ I+ KK ++S+ + + SI G+T + + Y K I ++ Sbjct: 130 AGETLIVPKKSKLNSIKDFNNSKYSIAAVKGSTADSDVHKYAP----KARVIFYDDYGSC 185 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 A + + A D + L L +D + +LPD + P I +G+ ++ Sbjct: 186 YNALKTGKASAMVSDNAVLAG--LISDDKDKFKMLPDTFTVEPYGIGIKRGEDKF 238 >gi|119511878|ref|ZP_01630977.1| glutamine-binding protein of glutamine ABC transporter [Nodularia spumigena CCY9414] gi|119463446|gb|EAW44384.1| glutamine-binding protein of glutamine ABC transporter [Nodularia spumigena CCY9414] Length = 236 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 32/138 (23%), Positives = 73/138 (52%), Gaps = 11/138 (7%) Query: 23 NASILGDIKKRGFLKCGINTGL--VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 +A+ + +I++RG+L + L +GF +V +G+ +G ++D + L+ + +++ Sbjct: 3 SAAQMPEIQRRGYLTIAVKDNLRPLGFRDV--DGNLQGLEIDLAKRLALDLLGKADAVRF 60 Query: 81 LPLNAKERFLALQSKQIDI-LSRNT-DWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 P+ ++R + + ++D+ ++R T + R +S + + YFDG I+ K +S Sbjct: 61 QPVANRDRLSVVLNNKVDLAIARVTATESRARLVSFSVPY----YFDGT-LIVTKDACVS 115 Query: 139 SVSQLSGASICVQAGTTT 156 +S L+ I V ++T Sbjct: 116 QLSDLANRKIAVIKNSST 133 >gi|167587662|ref|ZP_02380050.1| extracellular solute-binding protein family 3 [Burkholderia ubonensis Bu] Length = 266 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 48/196 (24%), Positives = 87/196 (44%), Gaps = 14/196 (7%) Query: 17 FTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 FT+ + +A +L +K+ G L+ G+ F +G +GFDVD +A+++ + Sbjct: 19 FTAVAAHAEDLLDSVKQAGVLRIGLEGTYPPFNSRGTSGQLEGFDVDVAKAVAAKLG--- 75 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-- 133 K Q++P LQ+ + D++ T R+ L + +P TY Q I K Sbjct: 76 VKTQFVPTEWSGIIAGLQAGKFDVIVNQVTITPQRKEVLDFS-QPYTYSAAQ-LIQRKDD 133 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 K+ S+ G + V GT + +A ++ +P E++ ++ A R +A Sbjct: 134 KRDFKSLEDFKGKKLGVTLGTNYD-QMARAVPGIEVQTYPGAPEKLRDLAAG----RIEA 188 Query: 194 YTGDISAL-YALKLTN 208 D L Y +K +N Sbjct: 189 TLDDRLMLPYMIKTSN 204 >gi|296110977|ref|YP_003621358.1| glutamine ABC transporter, substrate binding protein [Leuconostoc kimchii IMSNU 11154] gi|295832508|gb|ADG40389.1| glutamine ABC transporter, substrate binding protein [Leuconostoc kimchii IMSNU 11154] Length = 288 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 57/241 (23%), Positives = 102/241 (42%), Gaps = 22/241 (9%) Query: 27 LGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD---PSKIQYL 81 L ++K G + G+ +T L G + K G +GFD+D RA++ I P +++ Sbjct: 42 LARVEKLGRIVWGVKADTRLFGLMDTK-TGISQGFDIDIARAITVQISKQTGVPMSAEFV 100 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD-GQGFIMHKKKGISSV 140 P+++ + +++ ID T RE + + YFD GQ ++ K GI S+ Sbjct: 101 PVSSSSKMQLIKNTNIDGSVSTMTITPEREKIIDFTNQ---YFDAGQSILVKKDSGIRSI 157 Query: 141 SQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 ++ + +I V GTT L + M + + A ++ + A + D Sbjct: 158 KDMNDSKYTIIVVVGTTAATELKKFAPKAKM----LAVQDYATGMQALKSGQGQAMSTDN 213 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 + LY N P H I + + P A D ++ T+ A+ T +E G+ Sbjct: 214 AILYGFATEN--PEYH-IAGEAFTHGPYGIAF---DNNQKPMIDETNKALATIKENGVYN 267 Query: 259 K 259 K Sbjct: 268 K 268 >gi|170016503|ref|YP_001727422.1| amino acid ABC transporter periplasmic protein [Leuconostoc citreum KM20] gi|169803360|gb|ACA81978.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Leuconostoc citreum KM20] Length = 288 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 40/145 (27%), Positives = 69/145 (47%), Gaps = 12/145 (8%) Query: 27 LGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD---PSKIQYL 81 L ++K G + G+ +T L G K G +GFD+D +AL+ I P +++ Sbjct: 42 LARVEKLGRIVWGVKADTKLFGLMNTK-TGKPEGFDIDIAKALTVQISKQTGVPMSAEFV 100 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD-GQGFIMHKKKGISSV 140 P++A + +++ ID T RE + + YFD GQ ++ K GI+SV Sbjct: 101 PVSASSKMQLIKNTNIDGSVSTMTITPEREKIIDFTNQ---YFDAGQSILVKKDSGINSV 157 Query: 141 SQLSGA--SICVQAGTTTELTLADY 163 ++ + +I V GTT +A + Sbjct: 158 KDMNDSKYTIIVVVGTTAATEIAKF 182 >gi|328956871|ref|YP_004374257.1| glutamine-binding periplasmic protein [Carnobacterium sp. 17-4] gi|328673195|gb|AEB29241.1| glutamine-binding periplasmic protein [Carnobacterium sp. 17-4] Length = 266 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 47/205 (22%), Positives = 94/205 (45%), Gaps = 13/205 (6%) Query: 40 INTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99 ++T L G +++++ + KGFD+D +A++ + D +++ + +K R L++ ID Sbjct: 49 VDTNLFGLYDIQSS-EIKGFDIDIAKAITEELTGDADNAEFVEVTSKTRIPLLKNGNIDA 107 Query: 100 LSRNTDWTLLREISLGLAFRPITYFD-GQGFIMHKKKGISSVSQLSG-ASICVQAGTTTE 157 + T+ E + F I YFD GQ ++ I S+ L+ ++ G+T+ Sbjct: 108 IIAT--MTITEERKEQVNFTDI-YFDAGQALLVPNDSSIQSLDDLTADTTVLAVKGSTSA 164 Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 + + N+ + E E A ++ + DA T D + L L + D P + + Sbjct: 165 QNIRELSPEANV----LELENYSEAFTALQSGQGDAVTTDNAIL--LGIIADNPG-YRLA 217 Query: 218 PDIISKSPLAPAIIQGDTEWYNIVS 242 ++ P AI +G + N V+ Sbjct: 218 GGNFTQEPYGIAINKGQDAFLNEVN 242 >gi|288960219|ref|YP_003450559.1| ABC transporter substrate-binding protein [Azospirillum sp. B510] gi|288912527|dbj|BAI74015.1| ABC transporter substrate-binding protein [Azospirillum sp. B510] Length = 309 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 60/239 (25%), Positives = 100/239 (41%), Gaps = 17/239 (7%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 A L ++ RG L+ G G F + + +G+WKG AL+ + P ++ Sbjct: 58 ADTLQQVRNRGELRIGAPPGEPWFFKDQRSGEWKGIGWGAGVALAEELGVKPVAVETTWG 117 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 A LQ+ Q D+L D T R +++ +P+ Y+ G + S + L Sbjct: 118 TA---VAGLQAGQFDVLF-AMDATPQRALAVDFPVQPMFYY-ALGVLARDGLAAKSWNDL 172 Query: 144 S--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 I V GT+ + L + N K F ++E+ AA+ + R DA + AL Sbjct: 173 DKPDVRIGVVLGTSPDRELT--VRLTNAKLE--RFPNIDEVGAAFVSGRVDAVSLFHPAL 228 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQG-DTEWYNIVSWTHYAMVTAEELGITQK 259 L+ R + V+LPD I + + + + D W + W A+ + E G QK Sbjct: 229 VMLRSRVKRGT--VLLPDPIRAASTSAGVRRDVDKSWRD---WVGVAIQSLYESGRIQK 282 >gi|194288893|ref|YP_002004800.1| cysteine ABC transporter periplasmic protein [Cupriavidus taiwanensis LMG 19424] gi|193222728|emb|CAQ68731.1| cysteine ABC transporter, periplasmic binding component [Cupriavidus taiwanensis LMG 19424] Length = 273 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 51/210 (24%), Positives = 86/210 (40%), Gaps = 13/210 (6%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 +K + L + + A +L +K+ G LK G+ F A + +GFDV Sbjct: 9 FKSLLAASLVAGAGLAATAAHAADLLDTVKQAGVLKIGLEGTYPPFGFRGAKNELEGFDV 68 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D RA++ + P +++ LQ+ + D++ + T R+ L + P Sbjct: 69 DVARAVAGKLGVKP---EFVTTEWSGIIAGLQAGKFDVIVNQVNVTPQRQQVLDFS-TPY 124 Query: 122 TYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y D Q I K K+ S+ L G + V G+ LA ++K +P E + Sbjct: 125 VYSDAQ-LIQRKDDKRQFKSLEDLKGHKLGVSLGSNYN-DLAKSVAGIDVKTYPGAPEYL 182 Query: 180 EEIDAAYRAHRCDAYTGD-ISALYALKLTN 208 ++ A R DA D + Y +K TN Sbjct: 183 RDL----AAQRVDAALNDRLMVAYLVKTTN 208 >gi|295675491|ref|YP_003604015.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] gi|295435334|gb|ADG14504.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] Length = 278 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 49/220 (22%), Positives = 89/220 (40%), Gaps = 13/220 (5%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + + S L + +RG L+ G F +G G+DVD + L+ + K++ Sbjct: 36 AASPSTLQGVLQRGTLRVGDCLTFAPFGFYNKDGQPDGYDVDLAKELAKQM---GVKLEV 92 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + + R LQ+ ++D++ N L R + + F + ++ K GI S+ Sbjct: 93 VNTTSANRIPNLQTSKVDVVFCNFTRNLER--AKVIEFTAPYVVASEALLVRKNSGIQSI 150 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 +SG +I G+T D ++ N+ ++ + A + + DA D + Sbjct: 151 KDMSGRTIATVKGSTN----GDEVRSLNIPVKIQEYDSSQAAILAVKQGQADAMIEDNNF 206 Query: 201 L-YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 L Y KL P V ++ A + GD EW N Sbjct: 207 LAYQAKLD---PELAVTNEALVPLEYNAFGVKAGDQEWLN 243 >gi|331266481|ref|YP_004326111.1| ABC transporter substrate binding lipoprotein-amino acid transport [Streptococcus oralis Uo5] gi|326683153|emb|CBZ00771.1| ABC transporter substrate binding lipoprotein-amino acid transport [Streptococcus oralis Uo5] Length = 279 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 16/162 (9%) Query: 9 ILCLIILFFTSFST---------NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 I ++ LFF+ F T N +K+G + G + V + NG + GF Sbjct: 6 IALVLALFFSFFLTACTQKASDPNQDNWAKYQKQGSITIGFDNTFVPMGFEEKNGQYAGF 65 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D +A+S + KI++ P++ + LQ+ ID + +T E +AF Sbjct: 66 DIDLAQAVSEKL---GIKIKFQPIDWDMKETELQNGTIDAIWNG--YTATDERKEKVAF- 119 Query: 120 PITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTL 160 I Y + Q ++ KK + I S+ ++ + QAG++ L Sbjct: 120 TIPYMENQQVLVSKKSQNIHSIQAMTDKVLGAQAGSSGYLNF 161 >gi|229553193|ref|ZP_04441918.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus rhamnosus LMS2-1] gi|229313489|gb|EEN79462.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus rhamnosus LMS2-1] Length = 294 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 51/215 (23%), Positives = 85/215 (39%), Gaps = 35/215 (16%) Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 +T L G +K G +GFDVD +A++ I Q + + + R ++ +D + Sbjct: 70 DTRLFGLMNIKT-GKIEGFDVDMAKAITKQILGKKGNAQLVQVTSDTRVPMIKGGNLDAV 128 Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS--ICVQ------- 151 T+ E L F + + GQ ++ K I SV L + I VQ Sbjct: 129 IAT--MTITPERQKILDFSDVYFNAGQSLLVKKGSPIKSVKDLKKGTKVIGVQGSNSVDN 186 Query: 152 ----AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 A TT L LADY +A A ++ + DA T D LY + Sbjct: 187 VKKAAPDTTVLQLADYAQAF----------------TALKSGQGDALTTDNGILYGM--- 227 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 +++ +++ +K P AI +G + V+ Sbjct: 228 SEQDKNYIVTGGTFTKEPYGIAINKGQKPFVKAVN 262 >gi|312127064|ref|YP_003991938.1| extracellular solute-binding protein family 3 [Caldicellulosiruptor hydrothermalis 108] gi|311777083|gb|ADQ06569.1| extracellular solute-binding protein family 3 [Caldicellulosiruptor hydrothermalis 108] Length = 266 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 66/275 (24%), Positives = 107/275 (38%), Gaps = 30/275 (10%) Query: 1 MYKDFFVSILCLIILFF------TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54 MYK ++++ LI LF +S N + L IKK G++ N Sbjct: 1 MYKKA-IALVLLIALFIPFLSGCSSNEKNMTTLEKIKKTKEFVVGMDNTFPPMEFTDDNN 59 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + GFDVD ++ + +K++ + ++ AL+SK+ D + T R+ + Sbjct: 60 NTVGFDVDLANEIAKKL---GAKLKIVAVDWSGIQSALKSKKFDAIISCFSITDERKKAF 116 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 LA P Y + I S L G I VQA TT + + K N + Sbjct: 117 NLA-GPYLYIRQVIAVKKGDNSIKSFEDLKGIKIGVQANTTGD-SAVQKMKFINYEKDVT 174 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +ER+ + R A D Y K N P + I P + + P+ A+ + D Sbjct: 175 RYERITDAFNDLDIGRIKAVVIDSVVAYYYKKQN--PEKFDIAPAQLEREPVGIALRKED 232 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 + YN + QK ++Q+ KD T Sbjct: 233 KDLYNEI----------------QKILDQLEKDGT 251 >gi|227893075|ref|ZP_04010880.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus ultunensis DSM 16047] gi|227865126|gb|EEJ72547.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus ultunensis DSM 16047] Length = 273 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 53/221 (23%), Positives = 98/221 (44%), Gaps = 17/221 (7%) Query: 3 KDFFVSILCLIILFF--TSFSTNA--SILGDIKKRGFLKCGI--NTGLVGFAEVKANGDW 56 K F+S +I+L F T+ S N +I +K+ + G+ +T L G +K+ G Sbjct: 4 KKLFLSTFFIILLSFMLTACSQNKKQTIYETVKENKTINWGVKADTPLFGSMSIKS-GKV 62 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GF++D AL+ I +K ++ A + L+++ +D + T R+ + Sbjct: 63 NGFEIDLANALTHKILGKDAKANFVTTTANTKIQLLKNRNVDAVIAAMTITPERKKQVDF 122 Query: 117 AFRPITYFD-GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + +P YF GQ ++ I + L+ + V GTT+ AD K + K + Sbjct: 123 S-KP--YFPAGQSVMVSDHSKIKNAKDLNKQKVLVVKGTTS----ADAVKKVSPKAEILQ 175 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216 ++ + AA +A++ +A D L + D P V+ Sbjct: 176 YDDYGQAFAALKANQGNALVTDNGILAG--ILRDNPGYRVV 214 >gi|294637494|ref|ZP_06715780.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Edwardsiella tarda ATCC 23685] gi|291089326|gb|EFE21887.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Edwardsiella tarda ATCC 23685] Length = 300 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 48/225 (21%), Positives = 90/225 (40%), Gaps = 10/225 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M+K L + L + + N ++ L IK+ G + G V F+ Sbjct: 1 MHKSVLTMALLALSLPLYAVADNGAADSATLAKIKQNGVIVVGHRESSVPFSYYDNKQQV 60 Query: 57 KGFDVDFCRALSSAIFDD---PS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G+ D+ A+ +A+ P+ +++ LP+ ++ R LQ+ D +T R+ Sbjct: 61 VGYSQDYSNAIVAAVKKQLGLPNLQVKLLPITSQNRIPLLQNGTYDFECGSTTHNAERQQ 120 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + AF + G + K G+ L+G + V +GTT+E+ L + MK Sbjct: 121 QV--AFSNTLFIVGTRLLTAKDSGVHDFRDLAGKPVVVTSGTTSEILLNRMNEKEGMKMR 178 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 I + + + R A+ D + L + +P VI+ Sbjct: 179 IISAKDHGDAFRTLESGRAVAFMMDDALLAGERAKAKQPERWVIV 223 >gi|78061686|ref|YP_371594.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia sp. 383] gi|77969571|gb|ABB10950.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia sp. 383] Length = 266 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 45/196 (22%), Positives = 84/196 (42%), Gaps = 14/196 (7%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F I ++ T+ S A +L +K+ G LK + F A+G +GFDVD Sbjct: 8 FKQGIAAALLCIATATSHAADLLDTVKQSGVLKIALEGTYPPFDYRNADGQLEGFDVDVA 67 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 +A+++ + P Q++ LQ+ + D++ T R+ +L + P Y Sbjct: 68 KAVAARLGVKP---QFVTTEWSGILAGLQAGKFDVIVNQVAITPSRQQALDFS-TPYVYS 123 Query: 125 DGQGFIMHKK---KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Q ++ ++ + S+ +L G I V G+ + L A +++ +P E + + Sbjct: 124 SAQ--LLQRQNDARAFKSLDELKGKKIGVTMGSNY-VDLVKTVPAIDLQVYPGTPENLRD 180 Query: 182 IDAAYRAHRCDAYTGD 197 + A R DA D Sbjct: 181 LAAG----RIDAAVND 192 >gi|254411623|ref|ZP_05025399.1| Bacterial extracellular solute-binding protein, family 3 [Microcoleus chthonoplastes PCC 7420] gi|196181345|gb|EDX76333.1| Bacterial extracellular solute-binding protein, family 3 [Microcoleus chthonoplastes PCC 7420] Length = 260 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 33/132 (25%), Positives = 60/132 (45%), Gaps = 7/132 (5%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L +I++RG L + L A G +G ++D R L+ + P + P+ + Sbjct: 31 LAEIEQRGQLIVAVKDNLRPLGFRDATGSLQGLEIDIARRLAKELLGSPEAVVLQPVANR 90 Query: 87 ERFLALQSKQIDI-LSRNTDW-TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 +R + Q+DI ++R T + R + + + Y DG G I + I+ +S L Sbjct: 91 DRLSVVVEDQVDIAIARVTVTDSRARLVDFSIPY----YLDGAGIITNDAS-INLLSDLD 145 Query: 145 GASICVQAGTTT 156 +I V G++T Sbjct: 146 NQTIAVIKGSST 157 >gi|187930729|ref|YP_001901216.1| family 3 extracellular solute-binding protein [Ralstonia pickettii 12J] gi|187727619|gb|ACD28784.1| extracellular solute-binding protein family 3 [Ralstonia pickettii 12J] Length = 301 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 41/194 (21%), Positives = 77/194 (39%), Gaps = 6/194 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQYLP 82 L I+ + G+ + F+ + + GF D C + A+ K I+++P Sbjct: 32 LKKIQDSNTILIGVRESSIPFSYRDSKNEIVGFSADLCSRVIDAVRKKTGKPNLDIKHIP 91 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R +Q+ +D+ T T L+ AF + G + + K G+ Sbjct: 92 VTSQNRTSLVQNGSVDLECGVT--THLKSREQQTAFSTTFFIAGTRLLTNVKSGVKDFPD 149 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+G S+ AGTT+E L M + I + E ++ R A+ D L Sbjct: 150 LAGKSVITNAGTTSERILRRMNDEKKMNMNVISGKDYGESFLTLQSGRVAAFMMDDVLLA 209 Query: 203 ALKLTNDRPSEHVI 216 + +P + V+ Sbjct: 210 GARTLAQKPDDWVV 223 >gi|330830266|ref|YP_004393218.1| amino acid ABC transporter periplasmic amino acid-binding protein [Aeromonas veronii B565] gi|328805402|gb|AEB50601.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Aeromonas veronii B565] Length = 266 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 52/222 (23%), Positives = 90/222 (40%), Gaps = 18/222 (8%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L + +RG L+ G + G F G + GFDVD + ++ + K++++ Sbjct: 26 STLDAVLERGVLRVGFDAGYQPFEMTNKQGQYIGFDVDLAKMVAKEM---GVKVEFVNTA 82 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQ 142 AL + + D++ T R + + A I GQ ++ K+K I S + Sbjct: 83 WDGIIPALLTNKFDVIMGGMTVTPQRNLRVNFADPYIVV--GQTIVLRKEKAGEIKSFTD 140 Query: 143 LSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L+ I V+ GTT E + + + FE ++ + DA+ D+ Sbjct: 141 LNDPKYKIAVKLGTTGEQAVKRLIPKATL----LQFETQDDAKLEVINGKVDAFVYDLPY 196 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE---WYN 239 N H+ P + PLA AI +GD + W+N Sbjct: 197 NAIFASQNQGAVVHLDKP--FTFEPLAWAIRKGDQDTLNWFN 236 >gi|271968291|ref|YP_003342487.1| serine/threonine protein kinase-like protein [Streptosporangium roseum DSM 43021] gi|270511466|gb|ACZ89744.1| Serine/threonine protein kinase-like protein [Streptosporangium roseum DSM 43021] Length = 600 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 36/148 (24%), Positives = 68/148 (45%), Gaps = 17/148 (11%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + + +L IK G L+ G G F V GF+V+ ++ A+ K+++ Sbjct: 351 TVRSPLLDRIKAGGVLRVGYRDG---FPGVSLGVPPTGFEVEVAEYIARALKVPEGKVRF 407 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK----KKG 136 +P+ +R A++ ++D++ N +S+ A R F G ++ H+ + G Sbjct: 408 VPVGYADREAAVERGKVDLVIAN--------LSIDSADRSRVAFAGPYYVAHRDVLVRAG 459 Query: 137 --ISSVSQLSGASICVQAGTTTELTLAD 162 IS V L G +C+ AG +T ++D Sbjct: 460 MKISEVGHLRGKKLCLAAGQSTGSMISD 487 >gi|134294747|ref|YP_001118482.1| extracellular solute-binding protein [Burkholderia vietnamiensis G4] gi|134137904|gb|ABO53647.1| L-aspartate-binding protein / L-glutamate-binding protein [Burkholderia vietnamiensis G4] Length = 297 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 49/244 (20%), Positives = 95/244 (38%), Gaps = 6/244 (2%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 Y+ + I L + + L IK G + G + F+ N G+ Sbjct: 3 YQKAVLMIAALCAFASGAHAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGYSR 62 Query: 62 DFCRALSSAI---FDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 DF + A+ + P+ +++ +P+ ++ R +Q+ +DI +T L R+ A Sbjct: 63 DFQMKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLERQQQA--A 120 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F + G + K G+ + L G ++ AGTT+E L + I + Sbjct: 121 FSDTIFVIGTRLMTKKDSGVKDFADLKGKTVVTTAGTTSERLLRKMNNDKQLGMSIISAK 180 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + + R A+ D + L + +P E VI+ S+ + +GD ++ Sbjct: 181 DHGDSFNTLESGRAVAFMMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDADF 240 Query: 238 YNIV 241 +V Sbjct: 241 KKVV 244 >gi|262278835|ref|ZP_06056620.1| glutamate/aspartate transporter [Acinetobacter calcoaceticus RUH2202] gi|262259186|gb|EEY77919.1| glutamate/aspartate transporter [Acinetobacter calcoaceticus RUH2202] Length = 297 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 55/244 (22%), Positives = 95/244 (38%), Gaps = 7/244 (2%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 +S L + TS A L IK G + G + V A G G+ VD C Sbjct: 8 LIISTFMLCTVGATSQIQAADTLAKIKSSGKIVIGHRESSDPISYVVA-GKPVGYAVDIC 66 Query: 65 RALSSAIFDD---PS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ I + P K++Y + + R L + ID+ T + R+ +G F Sbjct: 67 NQFANDIKKELKMPGLKVEYKAVTSSTRIPELLAGNIDMECGTTTNSKQRQEQVG--FST 124 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + GI S++ L+G ++ GTT++ + K + I + Sbjct: 125 NYYATEVRMAVKANSGIKSLADLNGKAVVTTQGTTSDKYIKMNEKGQALTIQNIYGKDHS 184 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A + R A+ D + L L + P I+ ++S P + +GDT++ I Sbjct: 185 DSFAMMASGRAAAFVMDDNILAGLVAKSSTPKAFAIVGPVLSSEPYGIMLAKGDTKFKAI 244 Query: 241 VSWT 244 T Sbjct: 245 ADRT 248 >gi|220924480|ref|YP_002499782.1| family 3 extracellular solute-binding protein [Methylobacterium nodulans ORS 2060] gi|219949087|gb|ACL59479.1| extracellular solute-binding protein family 3 [Methylobacterium nodulans ORS 2060] Length = 302 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 56/229 (24%), Positives = 87/229 (37%), Gaps = 20/229 (8%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS----KIQYLP 82 L IK+ G + G V F+ + + GF +D C + A+ S K+ Y P Sbjct: 33 LKKIKETGTIVIGYRESSVPFSYLDNDQKPIGFSMDLCGHVVEAVKKKLSLSDLKVAYNP 92 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 +N+ R + + +D+ +T L R+ + AF T+ ++ GISS Sbjct: 93 VNSATRLPLVANGTVDLECGSTANQLARQKQV--AFSVSTFVAQFKWLTRVDSGISSPDD 150 Query: 143 LSGASICVQAGTTTELTLADYFKAHNM-------KYHPIVFERVEEIDAAYRAHRCDAYT 195 L G ++ V AGT T L + + K H F VE R A+ Sbjct: 151 LKGRNVVVTAGTNTAQFLNKLNQEQKLQLTITQGKDHAESFLLVE-------TGRASAFM 203 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 D L +K P+ IL S P A + D + +V T Sbjct: 204 EDDILLAGVKANAKEPARFKILDKAYSADPYALMFRRDDPAFKAVVDET 252 >gi|322388044|ref|ZP_08061650.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus infantis ATCC 700779] gi|321141065|gb|EFX36564.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus infantis ATCC 700779] Length = 280 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 37/157 (23%), Positives = 73/157 (46%), Gaps = 17/157 (10%) Query: 10 LCLIILFFTSF--------STNASILG--DIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + L+++FF +F ++N + +++ + G + V + NG + GF Sbjct: 6 ISLVLVFFLAFFLVGCTQKASNPKVDNWEKYQQQESITIGFDNTFVPMGFEEKNGQYVGF 65 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D +A+S + K+Q+ P++ + LQ+ ID + T R + Sbjct: 66 DIDLAQAVSEKL---GFKVQFQPIDWDMKETELQNGTIDAIWNGYSATDERREKVAFT-- 120 Query: 120 PITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTT 155 I Y + Q ++ KK + I SVS ++G + QAG++ Sbjct: 121 -IPYMENQQVLVSKKSQNIQSVSDMTGKVLGAQAGSS 156 >gi|227820464|ref|YP_002824435.1| substrate-binding component of ABC transporter [Sinorhizobium fredii NGR234] gi|227339463|gb|ACP23682.1| putative substrate-binding component of ABC transporter [Sinorhizobium fredii NGR234] Length = 267 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 8/176 (4%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 ++ A+ L DI RG ++ G+ TG V G+ G+DVD L + P + Sbjct: 23 SAVEAQAATLNDIISRGTVRIGVLTGAPPMGMVDEQGNPTGYDVDVAN-LIAGYLSLPGE 81 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 + +PL R ALQ+ ++D L T R ++ + +P + F+ I + Sbjct: 82 L--VPLTPPARIPALQTGKVDFLVATLAPTGERAKTV-MFTQPYSAFN-MDIISGPDQKF 137 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 + ++ L G + V G++ E L KA +V+E A A + DA Sbjct: 138 AKLADLEGKRVAVNRGSSQETALR---KAAVPGLEIVVYEDDSTSAQALIAGQVDA 190 >gi|121608200|ref|YP_996007.1| extracellular solute-binding protein [Verminephrobacter eiseniae EF01-2] gi|121552840|gb|ABM56989.1| extracellular solute-binding protein, family 3 [Verminephrobacter eiseniae EF01-2] Length = 373 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 55/250 (22%), Positives = 103/250 (41%), Gaps = 16/250 (6%) Query: 1 MYKDFFVSILCLIILFFTSF-STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + + + L S + L IK G + G+ G + NG + GF Sbjct: 73 MKKHLLAATVTSLCLSAGSVGAQTGDTLAKIKASGSVTLGVRES-SGLSYTLGNGKYVGF 131 Query: 60 DVDFCRALSSAIFDDPSK--------IQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 + ++ I D K +Y P+ ++ R + + +D+ +T T R+ Sbjct: 132 HTE----MAERILADIQKQLGLATLTTKYQPVTSQNRIPLVTNGTVDLECGSTTNTTARQ 187 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 + AF TY + GI+S+ L+G ++ GTT+ TL + +A + + Sbjct: 188 KDV--AFAMTTYVEEIRTATKANSGITSIRDLNGKTVATTTGTTSVQTLRRHQRADGVDF 245 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + + + R DAY D+S L A + PS++ I+ +++S P+A + Sbjct: 246 KEVFGKDHADSFLLLETGRADAYVMDVSILAANISKSKAPSDYKIVGEVLSVEPIACMLR 305 Query: 232 QGDTEWYNIV 241 + D + V Sbjct: 306 KDDPAFKKAV 315 >gi|300312815|ref|YP_003776907.1| amino acid ABC transporter/signal transduction system periplasmic protein [Herbaspirillum seropedicae SmR1] gi|300075600|gb|ADJ64999.1| ABC-type amino acid transport/signal transduction system, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 305 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 50/233 (21%), Positives = 93/233 (39%), Gaps = 8/233 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR----ALSSAIFDDPSKIQYLP 82 L IK + G T + F+ N G+ D C A+ + I +++ +P Sbjct: 36 LQKIKDANLIAIGHRTSSIPFSYYDENQQVIGYSQDLCNKVIDAVKTKIGAAKLEVRMVP 95 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVS 141 + ++ R LQ+ ID+ T R + A +F I+ K+ GI Sbjct: 96 VTSQNRTPLLQNGTIDLECGVTSNLKSRWQQVSFA---TNFFVASSRILTKRDSGIKDFP 152 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L+G ++ AGTT+E L + + M + E ++ R AY D L Sbjct: 153 DLAGKAVVTNAGTTSEQLLRNLNEHRKMGMQIQSAKDYGEAFLILQSGRVAAYVMDDVLL 212 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 + T +P++ V+ + P A + + D ++ +V T ++ + E+ Sbjct: 213 AGARTTAQKPNDWVLTGNPFGAEPYAFMVRRDDPQFKQLVDDTLSGLMKSGEI 265 >gi|217967439|ref|YP_002352945.1| extracellular solute-binding protein family 3 [Dictyoglomus turgidum DSM 6724] gi|217336538|gb|ACK42331.1| extracellular solute-binding protein family 3 [Dictyoglomus turgidum DSM 6724] Length = 257 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 18/203 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +S L +++ + A + IKK G LK G + F ++ + GFD Sbjct: 1 MRKGIIISFLFFLLVLYPVLGAGA--VERIKKVGVLKVGSDVAYAPFEFMEGDKPV-GFD 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + ++ A+ K+Q + + AL++K+ DI+ T R+ + + Sbjct: 58 IDIAQEIAKAL---GVKLQVINTSFDGIIAALKAKKFDIIISAMTITEERKKEIDFS--- 111 Query: 121 ITYFD-GQGFIMH-KKKGISSVSQLSGASICVQAGTTTELT---LADYFKAHNMKYHPIV 175 I Y+D GQ ++ + K I S L + VQ GTT ELT L D ++ + + Sbjct: 112 IPYYDSGQIIVVRSENKDIKSEKDLKDKVVGVQLGTTGELTAKKLKDQIGIKEIRSYETI 171 Query: 176 FERVEEIDAAYRAHRCDAYTGDI 198 E +++ R DA D+ Sbjct: 172 PEAFMDLELG----RLDAVINDL 190 >gi|170692242|ref|ZP_02883405.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] gi|170142672|gb|EDT10837.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] Length = 264 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 47/200 (23%), Positives = 85/200 (42%), Gaps = 15/200 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + K FV+ +I FT+ +A +L +K+RG L+ G+ F +G+ G+ Sbjct: 5 LLKKLFVA--AMIGASFTAIPAHADDLLDQVKQRGTLRVGLEGTFPPFNSKAPSGELVGY 62 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD +A+++ + P +++ LQ+ + D++ T R+ SL F Sbjct: 63 DVDIAKAVAAKLGVKP---EFITTEWSGIIAGLQAGKFDVIVNQVGITDARKQSLD--FS 117 Query: 120 PITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 P + I K + S+ L G + V GT + +A ++K +P E Sbjct: 118 PAYTYSAAQLIQRKDDTRQFKSLDDLKGKKLGVGLGTNY-MDMAKSVPGIDVKTYPGAPE 176 Query: 178 RVEEIDAAYRAHRCDAYTGD 197 + ++ A R DA D Sbjct: 177 YLRDL----AAGRLDAALND 192 >gi|282901104|ref|ZP_06309036.1| extracellular solute-binding protein, family 3 [Cylindrospermopsis raciborskii CS-505] gi|281194003|gb|EFA68968.1| extracellular solute-binding protein, family 3 [Cylindrospermopsis raciborskii CS-505] Length = 267 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 33/141 (23%), Positives = 67/141 (47%), Gaps = 13/141 (9%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF-DDPS-----K 77 A+ + +I++RG++ + A G+ +G ++D + L+ + D PS + Sbjct: 34 AATMQEIQERGYITIAVKDNTPPLAFRDKQGNLQGLEIDLAKRLARDLLGDSPSSRVKLQ 93 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE--ISLGLAFRPITYFDGQGFIMHKKK 135 +++ P+ ER A+ + ++D+ T R +SL + + Y+DG I+ K Sbjct: 94 VKFQPVTNVERLPAVFNHKVDLAIARVTATPSRSRIVSLSIPY----YYDGTA-IVTKNP 148 Query: 136 GISSVSQLSGASICVQAGTTT 156 I +S L+ ICV ++T Sbjct: 149 AIQKLSDLNKRRICVLNYSST 169 >gi|229593102|ref|YP_002875221.1| putative ABC transporter substrate-binding exported protein [Pseudomonas fluorescens SBW25] gi|229364968|emb|CAY53090.1| putative ABC transport system, substrate-binding exported protein [Pseudomonas fluorescens SBW25] Length = 300 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 53/239 (22%), Positives = 97/239 (40%), Gaps = 8/239 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPS----KIQYL 81 LG I + G V F+ V N G G+ V+ + I ++Y Sbjct: 30 LGKIANAQSITLGYRDASVPFSYVGDNSGKPMGYSVELADKIVERIRQKTGVATLNVKYT 89 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 + ++ R +Q+ +D+ +T T R+ + ++ I Y GQ + K GI + Sbjct: 90 LVTSQTRIPLVQNGTVDLECGSTGVTAERQKQVAFSYGFI-YVKGQ-LLTAKDSGIQGFA 147 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L+G ++ AGTT E L Y H I + E R A+ D + L Sbjct: 148 DLAGKNVVTTAGTTNERFLKSYNAEHKANMFVISAKDHGEAFKMLETGRAAAFYMDDALL 207 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQK 259 Y + P V++ + S+ + + + D+++ +V+ T + + E+ GI Q+ Sbjct: 208 YGERAKAKDPHNWVVVGEEQSREIYSCMVRKDDSQFLAVVNETLGDLYRSGEINGIYQR 266 >gi|260904718|ref|ZP_05913040.1| extracellular solute-binding protein family 3 [Brevibacterium linens BL2] Length = 299 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 4/144 (2%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDW-KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 K G LK G+ G VKA + +GFD++ + +++ + P +I+Y + R Sbjct: 61 KDAGELKVGVKYDQPGLGNVKAGSEQPEGFDIEIAKMVAAQLGFSPDQIKYTETVSANRE 120 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 LQ ID++ +T+ E + F Y GQ ++ + I+ L G +C Sbjct: 121 PFLQQGNIDMVVAT--YTINDERKKVVDFAGPYYVAGQDLLVAEDSDIAGPDDLDGKKVC 178 Query: 150 VQAGTTTELTLAD-YFKAHNMKYH 172 G+T + + Y KA + Y Sbjct: 179 SVDGSTPAQNIEEKYDKAELVAYD 202 >gi|134291750|ref|YP_001115519.1| extracellular solute-binding protein [Burkholderia vietnamiensis G4] gi|134134939|gb|ABO59264.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia vietnamiensis G4] Length = 296 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 55/259 (21%), Positives = 96/259 (37%), Gaps = 16/259 (6%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 F + L+ S + A L I + G + V F+ + GF VD Sbjct: 6 FAVLATLLAACVASTAACAQTLDKISRSGRIVVSYREAAVPFSYLLTPHKAVGFSVD--- 62 Query: 66 ALSSAIFDDPSK--------IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 ++ AI DD K + Y+P+ + R L D+ +T T R + + Sbjct: 63 -VTEAIVDDVRKTLRRPDLRVAYVPVTGQNRIPLLVDGSYDLECGSTTNTSARGKDVAFS 121 Query: 118 FRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 I YF +M K+ I + L+ ++ AG+T E TL A ++ ++ Sbjct: 122 ---INYFYAGTRLMAKRASHIGDYADLAHQAVATVAGSTNEKTLRRELAARHIDADVVLA 178 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + + A D LY L+ D P V+ D + P A + + D Sbjct: 179 KDYADALQMVATDKVAALALDDVLLYGLRANADDPGSWVVAGDALQVEPYACMVRKDDPA 238 Query: 237 WYNIVSWTHYAMVTAEELG 255 + +V T ++ + E Sbjct: 239 FKRLVDGTLTRLIRSGEFA 257 >gi|166364039|ref|YP_001656312.1| extracellular solute-binding protein [Microcystis aeruginosa NIES-843] gi|166086412|dbj|BAG01120.1| extracellular solute-binding protein [Microcystis aeruginosa NIES-843] Length = 260 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 35/138 (25%), Positives = 60/138 (43%), Gaps = 6/138 (4%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 SFS + L I +RG L + L A + + G+ +G ++D + L+ I + I Sbjct: 18 SFSAD---LDTIIRRGKLIVAVKNNLPPLAFLDSQGNLQGLEIDIAKRLAEEILGSDTAI 74 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 P++ +ER + ++D T R+ + F P Y D GF+ K Sbjct: 75 ILKPVSNQERLQVVIDDRVDFAIARVAITPARQRLVD--FSPFYYLDSSGFVT-KNLLFQ 131 Query: 139 SVSQLSGASICVQAGTTT 156 + L+ + I V G+TT Sbjct: 132 RLEDLANSRIAVLNGSTT 149 >gi|224368640|ref|YP_002602803.1| ABC-type amino acid transporter, periplasmic amino acid-binding protein [Desulfobacterium autotrophicum HRM2] gi|223691356|gb|ACN14639.1| ABC-type amino acid transporter, periplasmic amino acid-binding protein [Desulfobacterium autotrophicum HRM2] Length = 267 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 71/261 (27%), Positives = 111/261 (42%), Gaps = 21/261 (8%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 +++ LI L F+ S A+ L DI KRG L+ + +G +A + NGD G ++F + Sbjct: 9 MALAFLIALSFSGLSF-ANNLTDIVKRGELRVAVQSGNPPYAFIDKNGDHTGSMIEFTKG 67 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR-PITYFD 125 ++ A+ K++ L + AL S + DIL+ + TL R SL + F P Y Sbjct: 68 MADAM---GVKLKILDFDWDGLIPALLSGKADILAADMTPTLKR--SLKITFTDPWIYVQ 122 Query: 126 GQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 F K + + V++ S ++ V G+T E Y +K + + + Sbjct: 123 PCIFTRTDKAYQTLEDVNK-SDVTVGVLLGSTGENIARTYLPNAKIKAYKGGGRMIVQ-- 179 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI---ISKSPLAPAIIQGDTEWYNI 240 A A DA D L L + +D P V L D K PLA A+ E N+ Sbjct: 180 -ALVAGHVDAGVND--DLAVLTVLSDFPPNSVRLLDKRLGQGKDPLAFAVRH---EAVNL 233 Query: 241 VSWTHYAMVTAEELGITQKNI 261 W + T G +NI Sbjct: 234 WQWINLYFQTIRSSGEYDRNI 254 >gi|186471430|ref|YP_001862748.1| extracellular solute-binding protein [Burkholderia phymatum STM815] gi|184197739|gb|ACC75702.1| extracellular solute-binding protein family 3 [Burkholderia phymatum STM815] Length = 277 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 52/220 (23%), Positives = 86/220 (39%), Gaps = 13/220 (5%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + S L + +RG L+ G F +G G+DVD + L+ + K++ Sbjct: 35 AATGSTLQAVLQRGTLRVGDCLTFAPFGFYDKSGQPDGYDVDLAKELAKQM---GVKLEM 91 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + + R LQ+ ++D++ N L R + AF + ++ K GI SV Sbjct: 92 VNTTSANRIPNLQTAKVDVVFCNFTRNLERAKEI--AFTTPYVVASEALLVKKSSGIQSV 149 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 +SG +I G+T D +A + F+ E A + + DA D + Sbjct: 150 KDMSGHTIATVKGSTN----GDEVRALGIPVKIQEFDSSEAAILAVKQGQADAMIEDNNF 205 Query: 201 L-YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 L Y KL P V ++ A + GD W N Sbjct: 206 LAYQAKLD---PELTVTNEALVPLEYNAFGVKAGDQVWLN 242 >gi|330718494|ref|ZP_08313094.1| amino acid ABC transporter periplasmic protein [Leuconostoc fallax KCTC 3537] Length = 265 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 78/173 (45%), Gaps = 12/173 (6%) Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS---KIQYLPLNAKERFLALQSKQI 97 +T L G K G+++GFDVD RA++ I D + K + + +++ + L++ I Sbjct: 36 DTRLFGLMNTKT-GEYEGFDVDIARAVTKQIAKDQNIKLKAELVQVSSSSKIQLLKNANI 94 Query: 98 DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTT 155 D + + T+ +E + F + GQ ++ + I SV L+ G ++ GTT Sbjct: 95 DATA--SVMTITKERENQVDFTQPYFPAGQSLLVKENSDIRSVKDLNQPGRTVIGAVGTT 152 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 T+ ++ K + + A +A + DA T D + LY L N Sbjct: 153 AIPTMKEFAP----KVRVLSLADYAQSMTALKAGQGDALTTDNAILYGLAQQN 201 >gi|307706788|ref|ZP_07643593.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus mitis SK321] gi|307617873|gb|EFN97035.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus mitis SK321] Length = 279 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 35/153 (22%), Positives = 70/153 (45%), Gaps = 12/153 (7%) Query: 9 ILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 ++ + LF T+ + S +++G + G + V + NG + GFD+D Sbjct: 10 LVSFLTLFLTACTQKVSDPKQDNWNKYQEQGTITIGFDNTFVPMGFEEKNGQYTGFDIDL 69 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 +A+S + K+Q+ P++ + LQ+ ID++ T R + + I Y Sbjct: 70 AQAVSEKL---GFKVQFQPIDWDMKETELQNGTIDVIWNGYSATDERREKVAFS---IPY 123 Query: 124 FDGQGFIMHKK-KGISSVSQLSGASICVQAGTT 155 + Q ++ KK + I SV + ++ QAG++ Sbjct: 124 MENQQVLVAKKSQQIRSVEDMKDKTLGAQAGSS 156 >gi|91224516|ref|ZP_01259778.1| hypothetical binding protein component ofABC transporter [Vibrio alginolyticus 12G01] gi|269968273|ref|ZP_06182299.1| conserved hypothetical protein [Vibrio alginolyticus 40B] gi|91190858|gb|EAS77125.1| hypothetical binding protein component ofABC transporter [Vibrio alginolyticus 12G01] gi|269827130|gb|EEZ81438.1| conserved hypothetical protein [Vibrio alginolyticus 40B] Length = 262 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 55/241 (22%), Positives = 97/241 (40%), Gaps = 19/241 (7%) Query: 9 ILCLIIL-FFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 +LC L S + NA IL DIK G LK ++G + F NG + GFD+D + Sbjct: 4 LLCFAALGLAVSTTVNADPILDDIKSTGELKVCFDSGYMPFEMTAKNGQYIGFDIDLGKQ 63 Query: 67 LSSAIFDDPSKIQYLPLNAKERFL--ALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 ++ A+ ++++P+N + L + + ++ T +R + A P Sbjct: 64 MARAM-----DVKFVPVNTSWDGIIPTLLTGKCHMIMGGMTITPMRNTQVNFA-DPYVVI 117 Query: 125 DGQGFIMHKKKG-ISSVSQLSGAS--ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + K +G +SS L+ + + GTT E + Y + + E V E Sbjct: 118 GQSILVDLKHEGKVSSYRDLNSPEYVVATKLGTTGEQAVKRYLPKAKINLYETQSEAVLE 177 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + + DA+ D N H+ P + PL A+ QG+ + N + Sbjct: 178 VANG----KVDAFVYDFPYNSIYVAENKGQLMHLAKP--FTYEPLGWAVPQGNPDTLNFL 231 Query: 242 S 242 + Sbjct: 232 N 232 >gi|309780275|ref|ZP_07675026.1| glutamate/aspartate periplasmic-binding protein [Ralstonia sp. 5_7_47FAA] gi|308920978|gb|EFP66624.1| glutamate/aspartate periplasmic-binding protein [Ralstonia sp. 5_7_47FAA] Length = 301 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 41/194 (21%), Positives = 77/194 (39%), Gaps = 6/194 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQYLP 82 L I+ + G+ + F+ + + GF D C + A+ K I+++P Sbjct: 32 LKKIQDSNTILIGVRESSIPFSYRDSKNEIVGFSADLCSRVIDAVKKKTGKPNLDIKHIP 91 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R +Q+ +D+ T T L+ AF + G + + K G+ Sbjct: 92 VTSQNRTSLVQNGSVDLECGVT--THLKSREQQTAFSTTFFIAGTRLLTNVKSGVKDFPD 149 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+G S+ AGTT+E L M + I + E ++ R A+ D L Sbjct: 150 LAGKSVITNAGTTSERILRRMNDEKKMNMNVISGKDYGESFLTLQSGRVAAFMMDDVLLA 209 Query: 203 ALKLTNDRPSEHVI 216 + +P + V+ Sbjct: 210 GARTLAQKPDDWVV 223 >gi|302549233|ref|ZP_07301575.1| ABC transporter substrate-binding protein [Streptomyces viridochromogenes DSM 40736] gi|302466851|gb|EFL29944.1| ABC transporter substrate-binding protein [Streptomyces viridochromogenes DSM 40736] Length = 313 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 58/199 (29%), Positives = 84/199 (42%), Gaps = 31/199 (15%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK---GFDVDFCRALSS-----AIF 72 S A + D+++ G L+ G + G A NG K G D+D A++ A+ Sbjct: 54 SAAALLPADVRRSGRLRIGSSVGFPPGAYYP-NGPGKAPAGQDIDIADAVAKVLGVKAVR 112 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF-DGQGFIM 131 D S LP AL S + D+ + N T R ++ +TY DGQGF + Sbjct: 113 QDASFETILP--------ALGSGKYDVGTGNFGVTTQRLKTVDF----VTYINDGQGFAV 160 Query: 132 HK-----KKGISSVSQLSGASICVQAGTTTELTLADY----FKAHNMKYHPIVFERVEEI 182 K KK ++ ++QL G +I AGTT E TLA+ KA Y V+ Sbjct: 161 KKGDTTLKKKVTDLTQLCGLTIGTGAGTTFETTLAEQKGVCAKAGKKPYEVKVYSENAAT 220 Query: 183 DAAYRAHRCDAYTGDISAL 201 A + R D I+ L Sbjct: 221 LTALQQGRIDVIMSTINGL 239 >gi|323526240|ref|YP_004228393.1| family 3 extracellular solute-binding protein [Burkholderia sp. CCGE1001] gi|323383242|gb|ADX55333.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1001] Length = 264 Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust. Identities = 47/200 (23%), Positives = 86/200 (43%), Gaps = 15/200 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + K FV+ LI FT+ + +A +L +K+RG L+ G+ F +G+ G+ Sbjct: 5 LLKKLFVA--ALIGASFTAVTAHADDLLDQVKQRGTLRVGLEGTFPPFNSKAPSGELVGY 62 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD +A+++ + P +++ LQ+ + D++ T R+ +L F Sbjct: 63 DVDIAKAVAAKLGVKP---EFVTTEWSGIIAGLQAGKFDVIVNQVGITDARKQALD--FS 117 Query: 120 PITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 P + I K + S+ L G + V GT + +A ++K +P E Sbjct: 118 PAYTYSAAQLIQRKDDTRQFKSLEDLKGKKLGVGLGTNY-MDMAKSVPGIDVKTYPGAPE 176 Query: 178 RVEEIDAAYRAHRCDAYTGD 197 + ++ A R DA D Sbjct: 177 YLRDLAAG----RLDAALND 192 >gi|167570067|ref|ZP_02362941.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia oklahomensis C6786] Length = 264 Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust. Identities = 43/184 (23%), Positives = 76/184 (41%), Gaps = 12/184 (6%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 F + + A +L ++K+RG L+ G+ F G+ GFDVD +A+++ + P Sbjct: 19 FVAATAHAADLLDEVKQRGTLRIGLEGTFPPFNSKNPQGELVGFDVDIAKAIAAKLGVKP 78 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-- 133 +++ LQ+ + D++ T R +L F P F I K Sbjct: 79 ---EFVTTEWSGIIAGLQAGKFDVIVNQVGITDKRRETLD--FSPAYTFSSAQLIQRKDD 133 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 + S+ L G + V GT + +A ++K +P E + ++ A R DA Sbjct: 134 TRQFKSLEDLKGKKLGVALGTNY-MDMAKSVPGIDVKTYPGAPEYLRDLAAG----RLDA 188 Query: 194 YTGD 197 D Sbjct: 189 ALND 192 >gi|315037806|ref|YP_004031374.1| glutamine ABC transporter [Lactobacillus amylovorus GRL 1112] gi|325956282|ref|YP_004286892.1| glutamine ABC transporter [Lactobacillus acidophilus 30SC] gi|312275939|gb|ADQ58579.1| glutamine ABC transporter [Lactobacillus amylovorus GRL 1112] gi|325332847|gb|ADZ06755.1| glutamine ABC transporter [Lactobacillus acidophilus 30SC] Length = 272 Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust. Identities = 53/238 (22%), Positives = 98/238 (41%), Gaps = 15/238 (6%) Query: 3 KDFFVSILCLIILFFTSF---STNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWK 57 K F+++ L +I S N S+ +++ + G+ +T L G VK + + Sbjct: 4 KKFYLTFLIALITITLSACGQKKNESVYQTVRQTKTINWGVKADTPLFGSMSVK-DSKIR 62 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GF++D AL+ + +K ++ A + L++K ID + T+ E + Sbjct: 63 GFEIDLAEALTHKMLGKNAKANFVTTTANTKIQLLKNKNIDAVI--AAMTITPERKKQVN 120 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F + GQ ++ K I +V L+ + + GTT AD K + F+ Sbjct: 121 FSNPYFPAGQSIMVAKNSKIKNVKDLNNKRVLIVKGTTA----ADAVHKFAPKAEILQFD 176 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + AA +A + DA D L + +D P + + + P A+ +G T Sbjct: 177 DYGQAFAALKADQGDALVTDNGILAG--ILHDNPG-YKLTGGTFTNQPYGIAVNKGQT 231 >gi|188534469|ref|YP_001908266.1| glutamate and aspartate transporter subunit [Erwinia tasmaniensis Et1/99] gi|188029511|emb|CAO97388.1| Glutamate/aspartate periplasmic-binding protein [Erwinia tasmaniensis Et1/99] Length = 309 Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust. Identities = 52/233 (22%), Positives = 92/233 (39%), Gaps = 6/233 (2%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQY 80 S L I K G + G V F+ G+ D+ A+ +AI + P +++ Sbjct: 38 STLEKIAKTGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVAAIKTKLNKPDLQVKM 97 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 LP+ ++ R LQ+ D +T L R+ +F + G ++ K I Sbjct: 98 LPVTSQNRIPLLQNGTYDFECGSTTNNLERQKQA--SFSNSIFVVGTRLLVKKGGAIKDF 155 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + L G ++ V +GTT+E+ L M I + + + R A+ D + Sbjct: 156 ADLKGKTVVVTSGTTSEILLNKLNDEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDAL 215 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 L + +PS+ IL S + +GD E+ ++ T T+ E Sbjct: 216 LAGERAKAKKPSDWEILGTPQSHEAYGCMLRKGDNEFKKLMDDTIVQAQTSGE 268 >gi|318059839|ref|ZP_07978562.1| glutamate binding periplasmic protein [Streptomyces sp. SA3_actG] gi|318077304|ref|ZP_07984636.1| glutamate binding periplasmic protein [Streptomyces sp. SA3_actF] Length = 354 Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust. Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 5/144 (3%) Query: 31 KKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 + RG L G E A+G + GFD++ + +++ + ++I + + + R Sbjct: 110 RARGRLVVGAKEDQPYLGEKDPASGRYSGFDIEIAKMVAAGLGFPANRISFRTIASANRE 169 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASI 148 +LQ+ QID R+ +G A Y GQG ++ K + GI + L G + Sbjct: 170 TSLQNGQIDYYVGTYTINDNRKKLVGFAG--PYYMAGQGLLVRKDEDGIKGPADLDGKRV 227 Query: 149 CVQAGTTT-ELTLADYFKAHNMKY 171 C AG+T + DY KA + Y Sbjct: 228 CSAAGSTPYQRIQHDYPKADLVSY 251 >gi|167562880|ref|ZP_02355796.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia oklahomensis EO147] Length = 264 Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust. Identities = 43/184 (23%), Positives = 76/184 (41%), Gaps = 12/184 (6%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 F + + A +L ++K+RG L+ G+ F G+ GFDVD +A+++ + P Sbjct: 19 FVAATAHAADLLDEVKQRGTLRIGLEGTFPPFNSKNPQGELVGFDVDIAKAIAAKLGVKP 78 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-- 133 +++ LQ+ + D++ T R +L F P F I K Sbjct: 79 ---EFVTTEWSGIIAGLQAGKFDVIVNQVGITDKRRETLD--FSPAYTFSSAQLIQRKDD 133 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 + S+ L G + V GT + +A ++K +P E + ++ A R DA Sbjct: 134 TRQFKSLEDLKGKKLGVALGTNY-MDMAKSVPGIDVKTYPGAPEYLRDLAAG----RLDA 188 Query: 194 YTGD 197 D Sbjct: 189 ALND 192 >gi|290476187|ref|YP_003469087.1| glutamate/aspartate ABC transporter periplasmic binding protein [Xenorhabdus bovienii SS-2004] gi|289175520|emb|CBJ82323.1| glutamate/aspartate transport protein (ABC superfamily, peri_bind) [Xenorhabdus bovienii SS-2004] Length = 295 Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust. Identities = 48/231 (20%), Positives = 93/231 (40%), Gaps = 6/231 (2%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQYLP 82 L IK G + G V F+ + G+ D+ + A+ D P+ +++ +P Sbjct: 26 LKKIKDNGIIVVGHRESSVPFSYYDNQQNVVGYAQDYSNLIVDAVKKKLDMPNLQVKLIP 85 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R LQ+ D +T L R+ AF + G + +K GI Sbjct: 86 ITSQNRIPLLQNGTYDFECGSTTNNLERQKQA--AFSNTIFVVGTRLLTNKDSGIKGFDD 143 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+G + V +GTT+E+ L M+ I + + + R A+ D + L Sbjct: 144 LAGKHVVVTSGTTSEILLNKLNDEKQMQMRIISAKDHGDSFRTLESGRAVAFMMDDALLA 203 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 + +P + VI+ S+ + + D ++ ++ T + T+ E Sbjct: 204 GERAKAKKPDQWVIVGKPQSEEAYGCMLRKDDPQFKKLIDGTIVKVQTSGE 254 >gi|194468162|ref|ZP_03074148.1| extracellular solute-binding protein family 3 [Lactobacillus reuteri 100-23] gi|194453015|gb|EDX41913.1| extracellular solute-binding protein family 3 [Lactobacillus reuteri 100-23] Length = 294 Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 5/134 (3%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 IKKRG L G++ V K NG G+DVD RA++ + + Q + + KE Sbjct: 43 IKKRGTLLIGVDDTFVPMDFRKKNGQLVGYDVDLSRAVAK-VLGLKADFQSIDWSMKE-- 99 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 L++ ID + T R+ +AF + GQ ++ K I + + + G ++ Sbjct: 100 TELKNGTIDCIWNGYTATPSRQKR--IAFSRVYELSGQSLVVRKDSKIKNFADMKGKTLG 157 Query: 150 VQAGTTTELTLADY 163 +Q +T + Y Sbjct: 158 IQESSTAQTDFDKY 171 >gi|312198103|ref|YP_004018164.1| extracellular solute-binding protein family 3 [Frankia sp. EuI1c] gi|311229439|gb|ADP82294.1| extracellular solute-binding protein family 3 [Frankia sp. EuI1c] Length = 311 Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust. Identities = 52/220 (23%), Positives = 92/220 (41%), Gaps = 13/220 (5%) Query: 18 TSFSTNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 T+F +A+ L I++RG L G + L G + G +GFD + R LS IF P Sbjct: 56 TAFPASAT-LDRIRQRGELIVGTKFDQPLFGL-QNPTTGKIEGFDTEIARLLSIRIFGSP 113 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-K 134 K++++ +K R +Q ++D++ +T+ + F Y GQ ++ Sbjct: 114 DKVKFVETVSKNREPFIQQGKVDVVVAT--YTINDARKKLVDFAGPYYTAGQDIMVKAGD 171 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 + V+ L+G +C G+T+E L +A ++ + R DA Sbjct: 172 TTVHGVTDLNGKKVCTVEGSTSETNL----RAKAPGASVVLVDTYSSCAEQLLDGRVDAV 227 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 T D L L L + ++ + P +I+GD Sbjct: 228 TTDNVVL--LGLVSQHKDALKLVGTAFTSEPYGIGLIKGD 265 >gi|190895140|ref|YP_001985433.1| putative amino acid ABC transporter substrate-binding protein [Rhizobium etli CIAT 652] gi|190700801|gb|ACE94883.1| probable amino acid ABC transporter, substrate-binding protein [Rhizobium etli CIAT 652] Length = 282 Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust. Identities = 40/169 (23%), Positives = 78/169 (46%), Gaps = 30/169 (17%) Query: 8 SILCLIILFFTSF---STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 S L L I F + A+ L +IKK+G + GI T F+ + A+G +G+D+D Sbjct: 17 SSLALAIAFTGASHIRQAGAATLDEIKKKGTITFGIVTDQPPFSFINASGQNEGYDIDLS 76 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL----------SRNTDWTL-LREIS 113 + ++ + + + Y+P+ + R L + ++D+L ++ + EI+ Sbjct: 77 KLMAKELGVEAA---YVPITSANRIPQLMTGKVDMLICVMGVYPDRAKVVQYVAPYAEIN 133 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162 + + P K G++ V +LSG SI V+ G++ + + D Sbjct: 134 AAI-YGP------------KDGGVTKVEELSGHSIAVEKGSSMDKAVTD 169 >gi|238787904|ref|ZP_04631700.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia frederiksenii ATCC 33641] gi|238723852|gb|EEQ15496.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia frederiksenii ATCC 33641] Length = 263 Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust. Identities = 33/160 (20%), Positives = 70/160 (43%), Gaps = 5/160 (3%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K ++ L ++ + S A L I++RG L+ + F V + +G+D+D Sbjct: 4 KKRMLAWLGAALILVQAPSVLADQLEQIQQRGVLRVAVPQDFPPFGSVGTDLQPQGYDID 63 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 L+ + K+Q +P+ + R LQ+ ++D++ + RE ++ + Sbjct: 64 MAHYLADKM---KLKLQLVPVTSANRVPYLQTDKVDLVISSLGKNPEREKAIAFSRAYAP 120 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162 +F G K + QL+G ++ V G ++ L++ Sbjct: 121 FF--LGVFGAKDDALQQPEQLAGKTVGVTRGAVEDMVLSE 158 >gi|114764420|ref|ZP_01443646.1| putative periplasmic binding abc transporter protein [Pelagibaca bermudensis HTCC2601] gi|114543174|gb|EAU46192.1| putative periplasmic binding abc transporter protein [Roseovarius sp. HTCC2601] Length = 258 Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust. Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 12/158 (7%) Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F ++G+W G+++DF AL + I D P+ AL + +ID++ + Sbjct: 36 FYSPDSSGNWSGWEIDFADALCAEIEAD---CVITPVAWDGIIPALNTGKIDMIVASM-- 90 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFK 165 ++ E + +AF Y G I K+ I S + GA + V GT E +F Sbjct: 91 SITEERAKQIAFSDKYYDTPTGVIALKETEIQPSAEGIEGAYLGVSVGTIHETYARAHFS 150 Query: 166 --AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 A +++ +P V E ++++ A R DA GD+ AL Sbjct: 151 EAAADIRSYPTVDEELQDL----AAGRIDAVVGDMLAL 184 >gi|148255507|ref|YP_001240092.1| cyclohexadienyl dehydratase [Bradyrhizobium sp. BTAi1] gi|146407680|gb|ABQ36186.1| cyclohexadienyl dehydratase [Bradyrhizobium sp. BTAi1] Length = 263 Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust. Identities = 46/175 (26%), Positives = 79/175 (45%), Gaps = 15/175 (8%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSK 77 + + AS L +I +RG L+ G+ F + KA G + GFDVD AL A+ K Sbjct: 24 ALAEQASRLDEIMQRGSLRVGMTGDYKPFTYLDKATGKFSGFDVDMAEALGKAL---GVK 80 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH----- 132 ++++P + + ++ + D+ TL R+ GL PI +G+ I Sbjct: 81 VEFVPTSWPQLMKDFEADKFDVAMGGVSITLDRQ-KKGLFSTPIMR-EGKTPIARCSDTS 138 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP---IVFERVEEIDA 184 K + +S + + G + V G T E KA +++ H +FE + + DA Sbjct: 139 KYQTLSDIDK-PGTRVIVNPGGTNERFARANVKAADIRVHNDNVTIFEEIAKGDA 192 >gi|292487616|ref|YP_003530488.1| putative glutamate/aspartate ABC transporter periplasmic protein [Erwinia amylovora CFBP1430] gi|292898854|ref|YP_003538223.1| glutamate/aspartate ABC transporter substrate-binding protein [Erwinia amylovora ATCC 49946] gi|291198702|emb|CBJ45811.1| glutamate/aspartate ABC transporter, substrate-binding protein [Erwinia amylovora ATCC 49946] gi|291553035|emb|CBA20080.1| putative glutamate/aspartate ABC transport system, periplasmic component [Erwinia amylovora CFBP1430] Length = 309 Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust. Identities = 50/231 (21%), Positives = 93/231 (40%), Gaps = 6/231 (2%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQYLP 82 L I K G + G V F+ G+ D+ A+ +AI + P +++ LP Sbjct: 40 LEKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSDAIVAAIKKKLNKPDLQVKMLP 99 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R LQ+ D +T + R+ +F + G ++ K I + Sbjct: 100 VTSQNRIPLLQNGTYDFECGSTTNNIERQKQA--SFSNSIFVVGTRLLVKKGSAIKDFAD 157 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G ++ V +GTT+E+ L M + + + + R A+ D + L Sbjct: 158 LKGKTVVVTSGTTSEILLNKLNDEQKMGMRIVSAKDHGDSFRTLESGRAVAFMMDDALLA 217 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 + +PSE IL S+ + +GD+E+ ++ T T+ E Sbjct: 218 GERAKAKKPSEWEILGTPQSREAYGCMLRKGDSEFKKLMDDTIVQAQTSGE 268 >gi|163839930|ref|YP_001624335.1| glutamate-binding protein [Renibacterium salmoninarum ATCC 33209] gi|162953406|gb|ABY22921.1| glutamate-binding protein [Renibacterium salmoninarum ATCC 33209] Length = 277 Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust. Identities = 43/175 (24%), Positives = 77/175 (44%), Gaps = 10/175 (5%) Query: 30 IKKRGFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 IK G + G+ G + A G++ GFD++ R +++++ KIQ+ + + R Sbjct: 38 IKSNGKITIGVKEDQPGLGFKDPATGEYSGFDIEIARWMAASLGLSADKIQFQAIASSNR 97 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF-DGQGFIMHKKK-GISSVSQLSGA 146 AL + Q+D+ T R+ + A YF GQG ++ K I+S L+G Sbjct: 98 EQALANGQVDLYVGTYSITDKRKALVDFAG---PYFVTGQGLLVKKDNTSINSEKDLAGK 154 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 ++C G+T + F + + VE++ + DA T D + L Sbjct: 155 TVCSATGSTPIQNIKAKFPDTKTTEFDLYSKCVEQV----KNGSADALTTDQAIL 205 >gi|302522778|ref|ZP_07275120.1| glutamate binding periplasmic protein [Streptomyces sp. SPB78] gi|302431673|gb|EFL03489.1| glutamate binding periplasmic protein [Streptomyces sp. SPB78] Length = 261 Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust. Identities = 48/189 (25%), Positives = 85/189 (44%), Gaps = 19/189 (10%) Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 A+G + GFD++ + +++ + ++I + + + R +LQ+ QID R+ Sbjct: 39 ASGRYSGFDIEIAKMVAAGLGFPANRISFRTIASANRETSLQNGQIDYYVGTYTINDNRK 98 Query: 112 ISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTT-ELTLADYFKAHNM 169 +G A Y GQG ++ K + GI + L G +C AG+T + DY KA + Sbjct: 99 KLVGFAG--PYYMAGQGLLVRKDEDGIKGPADLDGKRVCSAAGSTPYQRIQHDYPKADLV 156 Query: 170 KY--HPIVFERVEEIDAAYRAHRCDAYTGDISAL--YALKLTNDRPSEHVILPDIISKSP 225 Y + I + + ++ DA T D S L YA K+ P E ++ S+ P Sbjct: 157 SYDTYSICVDNL-------LTYQVDAVTTDDSILLGYAAKV----PEELKVVGKPFSEEP 205 Query: 226 LAPAIIQGD 234 + + D Sbjct: 206 YGIGVPRKD 214 >gi|296273473|ref|YP_003656104.1| family 3 extracellular solute-binding protein [Arcobacter nitrofigilis DSM 7299] gi|296097647|gb|ADG93597.1| extracellular solute-binding protein family 3 [Arcobacter nitrofigilis DSM 7299] Length = 249 Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust. Identities = 46/241 (19%), Positives = 105/241 (43%), Gaps = 24/241 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M+ SI+ LI+L S+S + IL D G+++ G++ + F + +G GF Sbjct: 1 MHTTIMKSIIILILLVQYSYSKSFKEILND----GYIRVGVSYDYIPFGFINNDGILDGF 56 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D + + + + +++++ +++ + L ++DIL ++ + + F Sbjct: 57 DIDLIKRMMNKL---ELRVKFIEVSSTNKEKMLLDDKLDILFAGMSKD--KQSNKNIIFT 111 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP----IV 175 Y D Q +++ K + ++ + + GT + + +K P + Sbjct: 112 KPYYTDEQVILLNSNKNVKTLKDMDNMHVGSLKGTN--------YLTNFLKIQPNVLTVS 163 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F + ++ A + DA T S +A + P+E IL D+I + + A+ + + Sbjct: 164 FSQYPQLTKALAYNNIDAVTAGSS--WAKEQVESHPNEFRILSDVICQINYSMALKKSNE 221 Query: 236 E 236 + Sbjct: 222 D 222 >gi|239813837|ref|YP_002942747.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] gi|239800414|gb|ACS17481.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] Length = 300 Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust. Identities = 52/237 (21%), Positives = 99/237 (41%), Gaps = 15/237 (6%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK--------I 78 L IK G + G+ G + NG + GF D C + I D K Sbjct: 26 LAKIKASGSITEGVRES-SGLSYTLGNGQYTGFHYDIC----ANIIKDIQKHLGLAKLET 80 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 +Y P+ ++ R +Q+ +D+ +T R+ + A TY + + GI+ Sbjct: 81 KYQPVTSQNRVPLVQNGTVDLECGSTTNNATRQKDVSFAV--TTYVEEVRIAVKANSGIN 138 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 S+ L+G ++ GTT+ TL +A + + + + + + R DA+ D Sbjct: 139 SIKDLNGKTVATTTGTTSVQTLRKNERAGGIDFKELYGKDHSDSFLLLESGRADAFVMDG 198 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 S L + + P++ I+ +++S P+A I + D + +V + A + +L Sbjct: 199 SILASNIAKSKSPADFKIVGEVLSVEPIAIMIRKDDPAFKKVVDDSIKAQIKNGDLA 255 >gi|116629190|ref|YP_814362.1| amino acid ABC transporter periplasmic protein [Lactobacillus gasseri ATCC 33323] gi|238853883|ref|ZP_04644246.1| glutamine-binding protein [Lactobacillus gasseri 202-4] gi|311111032|ref|ZP_07712429.1| glutamine-binding protein [Lactobacillus gasseri MV-22] gi|116094772|gb|ABJ59924.1| amino acid ABC transporter substrate-binding protein, PAAT family [Lactobacillus gasseri ATCC 33323] gi|238833469|gb|EEQ25743.1| glutamine-binding protein [Lactobacillus gasseri 202-4] gi|311066186|gb|EFQ46526.1| glutamine-binding protein [Lactobacillus gasseri MV-22] Length = 273 Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust. Identities = 58/286 (20%), Positives = 114/286 (39%), Gaps = 29/286 (10%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCR 65 ++L + L ++ ++K+ + G+ +T L G +K G +GF+VD Sbjct: 12 TVLLSVFLLSACRKNTRNVYQEVKRSNEITWGVKADTRLFGLMSIKT-GKIEGFEVDLAN 70 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 AL+ + +K ++ AK + L++ ID + T+ E + F ++ Sbjct: 71 ALTKEMLGKDAKANFVQTTAKTKIPLLKNGNIDAVL--AAMTITPERKKQIDFSEPYFYA 128 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 GQ ++ + I +V L+G + GTT + K K + F+ + A Sbjct: 129 GQSLLVKEDSTIKNVQDLNGKTALAVKGTTAVANV----KKFAPKAKVLEFDDYGQAFTA 184 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 +A + A T D L + N + ++ + P A+ +G + N ++ Sbjct: 185 LKAGQGQAMTTDNGLLAGIATEN---KGYKLVGGTYTNEPYGIAVNKGQKQMKNAIN--- 238 Query: 246 YAMVTAEELGITQKNINQVSKDTT-NPDVQRFLGIDKSSNIGEALG 290 + +N++ KD T N V+++ NI EA G Sbjct: 239 -------------RALNKLKKDGTYNALVKKWFSGIPGFNIKEAEG 271 >gi|323529254|ref|YP_004231406.1| family 3 extracellular solute-binding protein [Burkholderia sp. CCGE1001] gi|323386256|gb|ADX58346.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1001] Length = 277 Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust. Identities = 38/173 (21%), Positives = 74/173 (42%), Gaps = 9/173 (5%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L + +RG L+ G F +G G+DVD + L+ + K++ + Sbjct: 39 STLKQVLQRGTLRVGDCLTFAPFGFYNKDGQPDGYDVDLAKELAKQM---GVKLEVVNTT 95 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 + R LQ+ ++D++ N L R + +AF + +++K GI S++ ++ Sbjct: 96 SANRIPNLQTSKVDVVFCNFTRNLER--AKEIAFTNPYVVASEALLVNKSSGIKSINDMA 153 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 +I G+T D ++ NM+ F+ + A + + DA D Sbjct: 154 NRTIATVKGSTN----GDEVRSLNMQVKIQEFDSSQAAILAVKQGQADAMIED 202 >gi|253990626|ref|YP_003041982.1| glutamate and aspartate transporter subunit [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253782076|emb|CAQ85240.1| glutamate/aspartate transport system permease protein glti [Photorhabdus asymbiotica] Length = 313 Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust. Identities = 53/259 (20%), Positives = 105/259 (40%), Gaps = 12/259 (4%) Query: 9 ILCLIILFFTSFSTNASILGDIKK---RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 +L +++L + + G +KK G + G V FA + G+ D+ Sbjct: 23 VLTMMLLGVAGAAQAEELTGTLKKIKDDGVIIVGHRESSVPFAYYDNHQKVVGYSQDYSN 82 Query: 66 ALSSAI---FDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + A+ D P+ +++ +P+ ++ R LQ+ D +T L R+ + F Sbjct: 83 LIVEAVKKKLDMPNLQVKLIPVTSQNRIPLLQNGTYDFECGSTSNNLERQKQV--TFSNT 140 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + + K GI L+G ++ V AGTT+E+ L NMK I + + Sbjct: 141 IFIVNTRLLTKKGSGIKDFPDLAGKNVVVSAGTTSEILLNKLNDEKNMKMRIISAKDHGD 200 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + R A+ D + L + +P + I+ S+ + D ++ ++ Sbjct: 201 SFRTLESGRAIAFMVDDALLAGERAKAKKPDQWEIVGKPQSREAYGCISRKDDLQFKKLI 260 Query: 242 SWTHYAMVTAEELGITQKN 260 T +V A+ G+ +K+ Sbjct: 261 DET---IVQAQTSGVAEKS 276 >gi|239814553|ref|YP_002943463.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] gi|239801130|gb|ACS18197.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] Length = 295 Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust. Identities = 43/235 (18%), Positives = 93/235 (39%), Gaps = 6/235 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 A L I + G + V F+ + GF V+ A+ A+ + PS ++Q Sbjct: 23 ADTLAKIAESGKITLAYRESSVPFSYLDGPNKPIGFSVELSNAVVEAVKKKLNKPSLQVQ 82 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R + + +D+ +T R + A ++ G ++ K I Sbjct: 83 LMPVTSQNRIPLITNGTVDLECGSTTNNSARGKDVAFAVN--HFYTGTRLLVKKSSKIKD 140 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L+ ++ GTT L + Y N+ ++ + + + R A+ D Sbjct: 141 YADLAKKTVASTTGTTNALVMRKYNTEKNLDMDIVLGKDHADAFLLVESDRAVAFAMDDI 200 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 L+ L P+++ ++ + + P A + + D + +V T M+ + E Sbjct: 201 LLFGLIANAKNPADYEVVGEPLQVEPYACMLPKDDPAFKKLVDDTFIGMMKSGEF 255 >gi|218517221|ref|ZP_03514061.1| probable amino acid ABC transporter, substrate-binding protein [Rhizobium etli 8C-3] Length = 261 Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust. Identities = 35/151 (23%), Positives = 72/151 (47%), Gaps = 27/151 (17%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 A+ L +IKK+G + GI T F+ + A+G +G+D+D + ++ + + + Y+P Sbjct: 14 GAATLDEIKKKGTITFGIVTDQPPFSFINASGQNEGYDIDLSKLMAKELGVEAA---YVP 70 Query: 83 LNAKERFLALQSKQIDIL----------SRNTDWTL-LREISLGLAFRPITYFDGQGFIM 131 + + R L + ++D+L ++ + EI+ + + P Sbjct: 71 ITSANRIPQLMTGKVDMLICVMGVYPDRAKVVQYVAPYAEINAAI-YGP----------- 118 Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLAD 162 K G++ V +LSG SI V+ G++ + + D Sbjct: 119 -KDGGVTKVEELSGHSIAVEKGSSMDKAVTD 148 >gi|227545108|ref|ZP_03975157.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri CF48-3A] gi|300909220|ref|ZP_07126681.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri SD2112] gi|68160911|gb|AAY86901.1| lr1730 [Lactobacillus reuteri] gi|227184896|gb|EEI64967.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri CF48-3A] gi|300893085|gb|EFK86444.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri SD2112] Length = 294 Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 5/134 (3%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 IKKRG L G++ V K NG G+DVD RA++ + + Q + + KE Sbjct: 43 IKKRGTLLIGVDDTFVPMDFRKKNGQLVGYDVDLSRAVAK-VLGLKADFQSIDWSMKE-- 99 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 L++ ID + T R+ +AF + GQ ++ K I + + + G ++ Sbjct: 100 TELKNGTIDCIWNGYTATPSRQKR--IAFSRVYELSGQSLVVRKDSKIKNFADMKGKTLG 157 Query: 150 VQAGTTTELTLADY 163 +Q +T + Y Sbjct: 158 IQESSTAQTDFDKY 171 >gi|330429005|gb|AEC20339.1| family 3 extracellular solute-binding protein [Pusillimonas sp. T7-7] Length = 299 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 42/236 (17%), Positives = 96/236 (40%), Gaps = 6/236 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD----DPSKIQ 79 A+ L +++ G G + F + N GF + + ++ + + D +++ Sbjct: 27 ATTLKKVEQTGTFTVGTRAASIPFNYLDDNNQQSGFAWEITQRVADKVKETVARDDIQVR 86 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 + + + R + ++ +D+ +T T RE ++F + G + I + Sbjct: 87 PMEVTPQTRIPLVANQTVDLECSST--THNRERENQVSFSTSFFIVGTRMLTLANSPIKN 144 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L+G ++ V AGTT E L ++ + I+ + ++ R DA D Sbjct: 145 WEDLAGKNVVVSAGTTAERLLRKVNDEKKLRVNIILSKDIDNTFMTVDTGRADAAMMDDM 204 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 LY+L + P + ++ +++ + + DTE+ +V M+ + E+ Sbjct: 205 VLYSLIARSPDPKKWKVVGEVLQPEAYGCMLRKDDTEFKELVDNVITGMMNSGEMA 260 >gi|302551504|ref|ZP_07303846.1| sugar-binding protein [Streptomyces viridochromogenes DSM 40736] gi|302469122|gb|EFL32215.1| sugar-binding protein [Streptomyces viridochromogenes DSM 40736] Length = 356 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 3/110 (2%) Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +GFD+D ++ I DP +Q+ + +R A+Q ++D++ R T+ + + Sbjct: 128 EGFDIDLVHRIAEDILGDPDAVQFKAIPTDQRIPAIQDGRVDMVVRT--MTINCDRIKDV 185 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFK 165 AF + GQ + K I L+G IC AG+T TL + K Sbjct: 186 AFSAPYFKTGQQVLAPKSSPIKGYDDTLAGRRICTAAGSTAYSTLEEDQK 235 >gi|282599606|ref|ZP_05971190.2| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Providencia rustigianii DSM 4541] gi|282568694|gb|EFB74229.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Providencia rustigianii DSM 4541] Length = 310 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 50/241 (20%), Positives = 100/241 (41%), Gaps = 9/241 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQYLP 82 L IK G + G V F+ + G+ D+ + A+ + P +++ +P Sbjct: 41 LKKIKDNGVIVVGHRESSVPFSYYDNSQKVVGYSQDYSNQIVDAVKKKLNMPDLQVKLIP 100 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R LQ+ D +T L R+ AF + G + K GI + Sbjct: 101 ITSQNRIPLLQNGTFDFECGSTTNNLERQKQA--AFSNTIFVVGTRLLAKKDAGIKDFAD 158 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+G ++ V +GTT+E+ L NMK I + + + R A+ D + L Sbjct: 159 LAGKNVVVTSGTTSEIILNQLNDQKNMKMRIISAKDHGDSFRTLESGRAVAFMMDDALLA 218 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 + +P+ I+ ++ + + D ++ ++ T + TA++ G +K+ N Sbjct: 219 GERAKAKQPAIWEIVGKPQTQEAYGCMLRKDDPQFKALIDET---ISTAQKSGTAEKSFN 275 Query: 263 Q 263 + Sbjct: 276 R 276 >gi|13473258|ref|NP_104825.1| glutamine-binding protein, glutamine ABC transporter [Mesorhizobium loti MAFF303099] gi|14024006|dbj|BAB50611.1| glutamine-binding protein, glutamine ABC transporter [Mesorhizobium loti MAFF303099] Length = 276 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 48/226 (21%), Positives = 93/226 (41%), Gaps = 16/226 (7%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S+L + RG L G + + G+ G D+ R L+ +FDDP+K++++ + Sbjct: 26 SLLRTVLDRGKLIVGTGSTNAPWHFENDAGELVGMDITMGRILAKGLFDDPTKVEFVMQD 85 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 +R + + ++DI + T R + + RP Y +G + + +L Sbjct: 86 PAQRIPNVTTNKVDITIQFMTMTAQRSQLINFS-RPY-YVEGVALLTLPTAENKTFDKL- 142 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA------AYRAHRCDAYTGDI 198 + G+ T +++ A + ++ + +V +ID A + R DA D+ Sbjct: 143 -----LAGGSATRISILQNVDAESSVHYALPQAQVLQIDTQANVLQALESKRADAAAVDL 197 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 S + L N P ++ A+ QGD +W V+ T Sbjct: 198 STVRWLASRN--PDKYFDAGKSWYSMLYGAALRQGDLDWLTFVNQT 241 >gi|315613066|ref|ZP_07887977.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis ATCC 49296] gi|315315176|gb|EFU63217.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis ATCC 49296] Length = 279 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 40/162 (24%), Positives = 73/162 (45%), Gaps = 16/162 (9%) Query: 9 ILCLIILFFTSFST---------NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 I ++ LFF+ F T N +K+G + G + V + NG + GF Sbjct: 6 IALVLALFFSFFLTACTQKASDPNQDNWAKYQKQGSITIGFDNTFVPMGFEEKNGQYAGF 65 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D +A+S + +I++ P++ + LQ+ ID + +T E +AF Sbjct: 66 DIDLAQAVSEKL---GIQIKFQPIDWDMKETELQNGTIDAIWNG--YTATDERKEKVAF- 119 Query: 120 PITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTL 160 I Y + Q ++ KK + I S+ ++ + QAG++ L Sbjct: 120 TIPYMENQQVLVSKKSQNIHSIQDMTDKVLGAQAGSSGYLNF 161 >gi|77456603|ref|YP_346108.1| extracellular solute-binding protein [Pseudomonas fluorescens Pf0-1] gi|77380606|gb|ABA72119.1| amino acid ABC transporter substrate-binding protein, PAAT family [Pseudomonas fluorescens Pf0-1] Length = 265 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 58/245 (23%), Positives = 102/245 (41%), Gaps = 16/245 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K + +L + + A + D KRG LK G++ + F G+ GF+VD Sbjct: 2 KKYLSMLLVGVTALVAVNAAQAGAIDDAVKRGSLKVGMDPTYMPFEMTNKRGEIIGFEVD 61 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 +A++ A+ K++ + AL + + D++ + TL +E +L L F Sbjct: 62 ILKAMTKAM---GVKLELVSTGYDGIIPALMTDKFDMIG--SGMTLTQERNLRLNFSEPF 116 Query: 123 YFDGQGFIMHK--KKGISSVSQLSGAS--ICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 GQ ++ K + I S L+ A I + GTT E+ KYH E+ Sbjct: 117 IVVGQTLLIRKELEGTIKSYKDLNTADYRITSKLGTTGEMVAKKLI--SKAKYHGYDNEQ 174 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI-ISKSPLAPAIIQGDTEW 237 +D + DA+ D A Y + N + ++ D + PLA + +GD + Sbjct: 175 EAVLDVV--NGKADAFIYD--APYNVVAVNKVGAGKLVFLDKPFTYEPLAFGLKKGDYDS 230 Query: 238 YNIVS 242 N ++ Sbjct: 231 LNFIN 235 >gi|51595216|ref|YP_069407.1| amino acid ABC transporter, periplasmic protein [Yersinia pseudotuberculosis IP 32953] gi|153950109|ref|YP_001402150.1| amino acid ABC transporter periplasmic protein [Yersinia pseudotuberculosis IP 31758] gi|170025546|ref|YP_001722051.1| extracellular solute-binding protein [Yersinia pseudotuberculosis YPIII] gi|186894233|ref|YP_001871345.1| extracellular solute-binding protein [Yersinia pseudotuberculosis PB1/+] gi|51588498|emb|CAH20106.1| putative amino acid ABC transporter, periplasmic protein [Yersinia pseudotuberculosis IP 32953] gi|152961604|gb|ABS49065.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia pseudotuberculosis IP 31758] gi|169752080|gb|ACA69598.1| extracellular solute-binding protein family 3 [Yersinia pseudotuberculosis YPIII] gi|186697259|gb|ACC87888.1| extracellular solute-binding protein family 3 [Yersinia pseudotuberculosis PB1/+] Length = 262 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 32/153 (20%), Positives = 69/153 (45%), Gaps = 5/153 (3%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 L +++ + + A L I++RG L+ + F V + +G+D+D + L+ Sbjct: 10 LWAVLVLVQAPAVLADQLEKIQQRGVLRVAVPQDFPPFGSVGTDLQPQGYDIDMAQYLAD 69 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 + K+Q +P+ + R LQ+ ++D++ + RE ++ + +F G Sbjct: 70 KM---KLKLQLVPVTSANRVPYLQTDKVDLVISSLGKNPEREKAIAFSRAYAPFF--LGV 124 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162 K + QL+G +I V G ++ L++ Sbjct: 125 FGAKDDELKQPEQLAGKTIGVTRGAVEDMVLSE 157 >gi|113866798|ref|YP_725287.1| ABC transporter periplasmic protein [Ralstonia eutropha H16] gi|113525574|emb|CAJ91919.1| ABC-type transporter, periplasmic component: PAAT family [Ralstonia eutropha H16] Length = 273 Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust. Identities = 48/188 (25%), Positives = 79/188 (42%), Gaps = 13/188 (6%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 A +L +K+ G LK G+ F A + +GFDVD RA++ + P +++ Sbjct: 31 ADLLDTVKQAGVLKIGLEGTYPPFGFRGAKNELEGFDVDVARAVAGKLGVKP---EFVTT 87 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVS 141 LQ+ + D++ + T R+ L + P Y D Q I K K+ S+ Sbjct: 88 EWSGIIAGLQAGKFDVIVNQVNVTPQRQQVLDFS-TPYVYSDAQ-LIQRKDDKRQFKSLE 145 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD-ISA 200 L G + V G+ LA ++K +P E + ++ A R DA D + Sbjct: 146 DLKGHKLGVSLGSNFN-DLAKSVPGIDVKTYPGAPEYLRDL----AAQRVDAALNDRLMV 200 Query: 201 LYALKLTN 208 Y +K N Sbjct: 201 AYLVKTAN 208 >gi|322374408|ref|ZP_08048922.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus sp. C300] gi|321279908|gb|EFX56947.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus sp. C300] Length = 279 Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust. Identities = 40/162 (24%), Positives = 73/162 (45%), Gaps = 16/162 (9%) Query: 9 ILCLIILFFTSFST---------NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 I ++ LFF+ F T N +K+G + G + V + NG + GF Sbjct: 6 IALVLALFFSFFLTACTQKASDPNQDNWAKYQKQGSITIGFDNTFVPMGFEEKNGQYAGF 65 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D +A+S + +I++ P++ + LQ+ ID + +T E +AF Sbjct: 66 DIDLAQAVSEKL---GIQIKFQPIDWDMKETELQNGTIDAIWNG--YTATDERKEKVAF- 119 Query: 120 PITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTL 160 I Y + Q ++ KK + I S+ ++ + QAG++ L Sbjct: 120 TIPYMENQQVLVSKKSQNIHSIQDMTDKVLGAQAGSSGYLNF 161 >gi|28870091|ref|NP_792710.1| glutamine ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213966881|ref|ZP_03395031.1| glutamine ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato T1] gi|301381564|ref|ZP_07229982.1| glutamine ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato Max13] gi|302061680|ref|ZP_07253221.1| glutamine ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato K40] gi|302131523|ref|ZP_07257513.1| glutamine ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28853337|gb|AAO56405.1| glutamine ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213928203|gb|EEB61748.1| glutamine ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato T1] gi|330877719|gb|EGH11868.1| glutamine ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330965183|gb|EGH65443.1| glutamine ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 277 Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust. Identities = 56/241 (23%), Positives = 103/241 (42%), Gaps = 27/241 (11%) Query: 23 NASILGDIKKRGFLKCGINTGLVGF-AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 +A L D+ + L CG+ + F A + G DVD C+AL+ + +++ Sbjct: 21 HADQLSDVMSKKSLSCGVYADVPPFSAPDPKTRELVGMDVDLCKALAKHMG---VELELK 77 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 PL+ + R ++ ++D++ N +T R + + F Y + ++ S Sbjct: 78 PLSVEARIPEVKMGRVDVIFANLAYT--RSRADQIQFSDPYYIAKETLVVRAANADQPKS 135 Query: 142 QLSGASICVQAGTTTE--LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 I G+T+E + LAD P+ F ++ +AY A + + G ++ Sbjct: 136 FFKDKRISSTKGSTSEQSIRLAD--------ATPVTF---QDTGSAYMALQQNKVVGLVT 184 Query: 200 -ALYALKLTNDRPSEHVILPDIISKSPLAPAII-----QGDTEWYNIVSWTHYAMVTAEE 253 + A+KL + V L I+K P+A I QG+ + V+ + YAM A E Sbjct: 185 NTMTAIKLVGQAKASGVEL--AIAKEPMALEPIGAGMRQGEPAFLAKVNESLYAMEAAGE 242 Query: 254 L 254 + Sbjct: 243 I 243 >gi|27378207|ref|NP_769736.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] gi|27351354|dbj|BAC48361.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] Length = 302 Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust. Identities = 52/247 (21%), Positives = 94/247 (38%), Gaps = 20/247 (8%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 + + + L S + ++ L IK G + G + F+ + + GF +D C Sbjct: 13 LIGLAAVGTLAGPSIAADSPTLAKIKSSGAITIGHREASIPFSYLGPDQKPIGFSLDLCA 72 Query: 66 ALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNT--DWTLLREISLGLAFR 119 + I + S + Y P+N+ R +QS +DI T D ++S +A Sbjct: 73 GIVERIKAELSLPNLAVNYTPVNSSNRIPLIQSGTVDIECGGTANDRKRQEQVSFSVA-- 130 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 T+ +++ G+ + L G +I V G+ + + N K + F V Sbjct: 131 --TFVSQPRWLVKADSGLKTAGDLKGKTIVVTQGSNA----VGFAQGVNAKEQ-LGFNIV 183 Query: 180 EEIDAA-----YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + D A R A+ D L LK +P + LP+ +K +GD Sbjct: 184 QAKDHAESFLMLNTGRAAAFMEDDILLAGLKAAAPKPDALIFLPEGYAKIYYGLMFTKGD 243 Query: 235 TEWYNIV 241 + +V Sbjct: 244 AGFKALV 250 >gi|134299236|ref|YP_001112732.1| extracellular solute-binding protein [Desulfotomaculum reducens MI-1] gi|134051936|gb|ABO49907.1| amino acid ABC transporter substrate-binding protein, PAAT family [Desulfotomaculum reducens MI-1] Length = 277 Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust. Identities = 51/224 (22%), Positives = 89/224 (39%), Gaps = 26/224 (11%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 T + L IK++G + G++ + GFD+D ++ + KIQ+ Sbjct: 39 QTEKNTLDQIKEKGVIVAGLDDTFAPMGYRDESNKLVGFDIDMGEEMAKRL---GVKIQW 95 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-- 138 P +AL SK+ DI+ T R+ S+ + + Y G G IM KKG + Sbjct: 96 QPTQWDGIIMALDSKRFDIILSGMTVTEERKKSINFS---VPYV-GDGQIMVVKKGTTGF 151 Query: 139 -SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + + L G + QAG++ E + +K + Y D G Sbjct: 152 NTAADLKGKVVGTQAGSSGEEAVKKVEGIKEVKLY-----------KTYPEAFTDLQIGR 200 Query: 198 ISALYALKLT-----NDRPSEHVILPDIISKSPLAPAIIQGDTE 236 I + ++T + R + I+ + I+ PLA + + D E Sbjct: 201 IPVVVCDRITASHYISKRADTYEIVGEKITDEPLAIGLRKSDPE 244 >gi|325523433|gb|EGD01757.1| polar amino acid transporter substrate-binding protein [Burkholderia sp. TJI49] Length = 266 Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust. Identities = 48/196 (24%), Positives = 85/196 (43%), Gaps = 14/196 (7%) Query: 17 FTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 FT+ + +A +L +KK G L+ G+ F +G +GFDVD A++ + Sbjct: 19 FTAVAAHAEDLLDSVKKAGVLRVGLEGTYPPFNSRGTSGQLEGFDVDVANAVAGKLG--- 75 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-- 133 K Q++P LQ+ + D++ T R+ +L + +P TY Q I K Sbjct: 76 VKTQFVPTEWSGIIAGLQAGKFDVIVNQVTITPQRKEALDFS-QPYTYSAAQ-LIQRKDD 133 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 + S+ G + V GT + +A ++ +P E++ ++ A R +A Sbjct: 134 TRDFKSLEDFKGKKLGVTLGTNYD-QMARAVPGIEVQTYPGAPEKLRDLAAG----RIEA 188 Query: 194 YTGDISAL-YALKLTN 208 D L Y +K +N Sbjct: 189 TLDDRLMLPYMIKTSN 204 >gi|222081209|ref|YP_002540572.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221725888|gb|ACM28977.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 278 Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust. Identities = 38/158 (24%), Positives = 66/158 (41%), Gaps = 12/158 (7%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQ 79 S NA L DI ++CG + FA + GFDVD C A++ A+ P + Sbjct: 20 SANADQLADIMTAKVIRCGTFADVPPFASPDPKTREMVGFDVDLCGAIAQALGVKP---E 76 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 P++ + R ++ +DI N +T+ R S + F Y + I+ Sbjct: 77 IKPVSVEARVPEVKLGHVDIAVANLAYTVSR--SEQIQFSDPYYLAKEMLIVKVGDAGQK 134 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + +G + G+T+EL++ K P+ F+ Sbjct: 135 KADFAGVRLASTKGSTSELSI------RLNKSQPLTFQ 166 >gi|221065073|ref|ZP_03541178.1| extracellular solute-binding protein family 3 [Comamonas testosteroni KF-1] gi|264680314|ref|YP_003280224.1| amino-acid ABC transporter bindingprotein ybeJ precursor [Comamonas testosteroni CNB-2] gi|299532720|ref|ZP_07046108.1| amino-acid ABC transporter bindingprotein ybeJ precursor [Comamonas testosteroni S44] gi|220710096|gb|EED65464.1| extracellular solute-binding protein family 3 [Comamonas testosteroni KF-1] gi|262210830|gb|ACY34928.1| amino-acid ABC transporter bindingprotein ybeJ precursor [Comamonas testosteroni CNB-2] gi|298719355|gb|EFI60324.1| amino-acid ABC transporter bindingprotein ybeJ precursor [Comamonas testosteroni S44] Length = 299 Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust. Identities = 54/247 (21%), Positives = 99/247 (40%), Gaps = 15/247 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K ++I + T F+ L IK G + G+ G NG + GF + Sbjct: 2 KKHLLAIAVTALATGTVFAQANDTLAKIKSTGSVTLGVRES-SGLGYTLGNGKYVGFHTE 60 Query: 63 FCRALSSAIFDDPSK--------IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + I D K ++Y P+ ++ R +Q+ +DI +T R+ Sbjct: 61 ----MGERILKDIQKQLGLTALEVKYQPVTSQNRIPLVQNGTVDIECGSTTNNTARQKDA 116 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 AF TY + GI+ + L+G +I GTT+ TL +A + + + Sbjct: 117 AFAF--TTYVEEVRIATRANSGITGIKDLNGKTIVTTTGTTSVQTLRKNKRADGLTFKEV 174 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + + R DA+ D S L A + P+++ I+ +++S P+A + + D Sbjct: 175 MGKDHADSFLMLETGRADAFIMDGSILAANISKSKAPNDYKIVGEVLSVEPIACMMRKDD 234 Query: 235 TEWYNIV 241 + V Sbjct: 235 PAFKKAV 241 >gi|329666779|gb|AEB92727.1| ABC transporter solute-binding component [Lactobacillus johnsonii DPC 6026] Length = 262 Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust. Identities = 45/176 (25%), Positives = 73/176 (41%), Gaps = 10/176 (5%) Query: 6 FVSILCLIILFFTSFSTNASILGD-----IKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + L L+I+ TS + IK RG L G++ V + +G GFD Sbjct: 4 IIRFLGLLIIVLTSVGLAGCQRQENSWQAIKSRGTLVIGVDDSFVPMDFRQKDGKLVGFD 63 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A+ I P Q + + KE L++ ID++ T RE +AF Sbjct: 64 VDLAKAVCKEIGLKPD-FQTIDWSMKE--TELRNGTIDVIWNGYTKTKAREKK--VAFSK 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + Q + K +GI++ Q+ G + VQ G++ L +Y K + V Sbjct: 119 PYLENDQILVTRKNEGINNYRQMRGKILGVQTGSSGTDDLDNYPKVLKKRVKSTVL 174 >gi|83718424|ref|YP_442093.1| amino acid ABC transporter periplasmic amino acid-binding protein [Burkholderia thailandensis E264] gi|167580939|ref|ZP_02373813.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia thailandensis TXDOH] gi|167619034|ref|ZP_02387665.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia thailandensis Bt4] gi|257138279|ref|ZP_05586541.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia thailandensis E264] gi|83652249|gb|ABC36312.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia thailandensis E264] Length = 266 Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust. Identities = 45/186 (24%), Positives = 79/186 (42%), Gaps = 9/186 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 +K F S L +L + S +A+ +L +K+ G LK + F A+G +GFD Sbjct: 4 FKPMFTSALVAALLGIATASAHAADLLDSVKQAGVLKIALEGTYPPFDYRNADGQLEGFD 63 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + +++ + P Q++ LQ+ + D++ T R +L + +P Sbjct: 64 VDVAKEVAARLGVKP---QFVTTEWSGILAGLQAGKFDVIVNQVGITPARRQALDFS-QP 119 Query: 121 ITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y Q I K + L G I V GT LA + ++K +P E+ Sbjct: 120 YVYSAAQ-LIQRADDKHDYGAPGALQGKRIGVTLGTNFA-DLAKTLQGVDVKTYPGAPEK 177 Query: 179 VEEIDA 184 + ++ A Sbjct: 178 LRDVAA 183 >gi|302336265|ref|YP_003801472.1| amino acid ABC transporter substrate-binding protein, PAAT family [Olsenella uli DSM 7084] gi|301320105|gb|ADK68592.1| amino acid ABC transporter substrate-binding protein, PAAT family [Olsenella uli DSM 7084] Length = 323 Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 79/174 (45%), Gaps = 12/174 (6%) Query: 30 IKKRG-FLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 IK G F G+ T + FA++ + +G +GFD + L I D SK + + + Sbjct: 80 IKDAGSFRLGGVQTSTL-FAQLDETDGKLRGFDAGLAQLLVRYILGDESKYDFTQVTSST 138 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGA 146 R LQ+ Q+D + +++ + ++F Y QG ++ I+SV L+ Sbjct: 139 RESVLQNDQVDAVFAT--YSITDDRKKAISFAGPYYTSQQGILVAASNSDINSVDDLADK 196 Query: 147 SICVQAGTTTELTLADYF-KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 ++ VQ+G+T +A+ KA + F EE A R DAY D++ Sbjct: 197 NVAVQSGSTGPQIVAELAPKAVTQE-----FTTDEEARTALEQGRVDAYVIDVT 245 >gi|218670915|ref|ZP_03520586.1| putative substrate-binding component of ABC transporter [Rhizobium etli GR56] Length = 101 Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust. Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 2/101 (1%) Query: 1 MYKDFFVSILCLII--LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M F ++ L+ L T S L ++ RG L G + + A+ +G Sbjct: 1 MTISFRTGVISLVAAALLSTPALAEGSKLDEVLARGHLVLGTGSTNAPWHFKSADDKLQG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99 FDVD R ++ A+F DP KI+Y+ ++ R + + ++DI Sbjct: 61 FDVDMGRIIAKALFGDPEKIEYVNQSSDARIPNITTDKVDI 101 >gi|209515706|ref|ZP_03264570.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] gi|209503942|gb|EEA03934.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] Length = 264 Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust. Identities = 47/196 (23%), Positives = 87/196 (44%), Gaps = 14/196 (7%) Query: 17 FTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 FT+ + +A+ +L +K+RG L+ G+ F +G+ G+DVD +A+++ + P Sbjct: 19 FTAVAAHAADLLDQVKQRGTLRVGLEGTFPPFNSKAPSGELVGYDVDIAKAVAAKLGVKP 78 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK- 134 +++ LQ+ + D++ T R+ +L F P + I K Sbjct: 79 ---EFVTTEWSGIIAGLQAGKFDVIVNQVGITDARKQTLD--FSPAYTYSAAQLIQRKDD 133 Query: 135 -KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 + +S+ L G + V GT + +A ++K +P E + ++ A R DA Sbjct: 134 TRQFTSLEDLKGKKLGVGLGTNY-MDMAKAVPGIDVKTYPGAPEYLRDL----AAGRLDA 188 Query: 194 YTGDISAL-YALKLTN 208 D L Y LK +N Sbjct: 189 ALNDRLMLAYLLKNSN 204 >gi|42518509|ref|NP_964439.1| ABC transporter solute-binding component [Lactobacillus johnsonii NCC 533] gi|41582794|gb|AAS08405.1| ABC transporter solute-binding component [Lactobacillus johnsonii NCC 533] Length = 262 Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust. Identities = 39/147 (26%), Positives = 65/147 (44%), Gaps = 5/147 (3%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 IK RG L G++ V + NG GFDVD +A+ I P Q + + KE Sbjct: 33 IKSRGTLVIGVDDSFVPMDFRQKNGKLVGFDVDLAKAVCKEIGLKPD-FQTIDWSMKE-- 89 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 L++ ID++ +T + + +AF + Q + K +GI++ Q+ G + Sbjct: 90 TELRNGTIDVIWNG--YTKTKARAKKVAFSKPYLENDQILVTRKNEGINNYRQMKGKILG 147 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVF 176 VQ G++ L +Y K + V Sbjct: 148 VQTGSSGADDLDNYPKVLKKRVKSTVL 174 >gi|241664919|ref|YP_002983279.1| family 3 extracellular solute-binding protein [Ralstonia pickettii 12D] gi|240866946|gb|ACS64607.1| extracellular solute-binding protein family 3 [Ralstonia pickettii 12D] Length = 301 Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust. Identities = 41/194 (21%), Positives = 76/194 (39%), Gaps = 6/194 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQYLP 82 L I+ + G+ + F+ + + GF D C + A+ K I+ +P Sbjct: 32 LKKIQDSNTILIGVRESSIPFSYRDSKNEIVGFSADLCSRVIDAVKKKTGKPNLDIKQIP 91 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R +Q+ +D+ T T L+ AF + G + + K G+ Sbjct: 92 VTSQNRTSLVQNGSVDLECGVT--THLKSREQQTAFSTTFFIAGTRLLTNVKSGVKDFPD 149 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+G S+ AGTT+E L M + I + E ++ R A+ D L Sbjct: 150 LAGKSVITNAGTTSERILRKMNDEKKMNMNVISGKDYGESFLTLQSGRVAAFMMDDVLLA 209 Query: 203 ALKLTNDRPSEHVI 216 + +P + V+ Sbjct: 210 GARTLAQKPDDWVV 223 >gi|83719983|ref|YP_443031.1| amino acid ABC transporter periplasmic amino acid-binding protein [Burkholderia thailandensis E264] gi|167582027|ref|ZP_02374901.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia thailandensis TXDOH] gi|167620192|ref|ZP_02388823.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia thailandensis Bt4] gi|257139260|ref|ZP_05587522.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia thailandensis E264] gi|83653808|gb|ABC37871.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia thailandensis E264] Length = 264 Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust. Identities = 42/184 (22%), Positives = 77/184 (41%), Gaps = 12/184 (6%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 F + + A +L ++K+RG L+ G+ F G+ GFDVD +A+++ + P Sbjct: 19 FVAATAHAADLLDEVKQRGTLRIGLEGTFPPFNSKNPQGELVGFDVDIAKAIAAKLGVKP 78 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-- 133 +++ LQ+ + D++ T R+ +L F P + I K Sbjct: 79 ---EFVTTEWSGIIAGLQAGKFDVIVNQVGITDQRKQTLD--FSPAYTYSSAQLIQRKDD 133 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 + S+ L G + V GT + +A ++K +P E + ++ A R DA Sbjct: 134 ARQFKSLEDLKGKKLGVALGTNY-MDMAKSVPGIDVKTYPGAPEYLRDLAAG----RLDA 188 Query: 194 YTGD 197 D Sbjct: 189 ALND 192 >gi|300718324|ref|YP_003743127.1| extracellular solute-binding protein [Erwinia billingiae Eb661] gi|299064160|emb|CAX61280.1| extracellular solute-binding protein [Erwinia billingiae Eb661] Length = 279 Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust. Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 7/154 (4%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRA 66 S+L L ++ S S A L DI+ RG L C + + + F+ G DVD C A Sbjct: 9 SVLALPLMMAFS-SAKADALSDIQARGQLNCAVYSDVPPFSSPDPKTRQLVGMDVDLCTA 67 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + K+ +P + + R + + + D+L N +T R + F Y Sbjct: 68 LAQQMG---LKLNLMPTSIEARIAVIATGRADVLIANLAYTKTR--GKQIQFSDPYYVAK 122 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 + ++ K + + G I GTT+E ++ Sbjct: 123 EMLVVKKPDVDKTKADFKGKRISATKGTTSEQSI 156 >gi|260461492|ref|ZP_05809739.1| extracellular solute-binding protein family 3 [Mesorhizobium opportunistum WSM2075] gi|259032562|gb|EEW33826.1| extracellular solute-binding protein family 3 [Mesorhizobium opportunistum WSM2075] Length = 290 Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust. Identities = 48/226 (21%), Positives = 90/226 (39%), Gaps = 16/226 (7%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S+L + RG L G + + G+ G D+ R L+ +FDDP+K++++ + Sbjct: 40 SLLRTVLDRGKLIVGTGSTNAPWHFENDAGELVGMDITMGRILAKGLFDDPTKVEFVMQD 99 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 +R + + ++DI + T R + RP Y +G + + +L Sbjct: 100 PAQRIPNVTTNKVDITIQFMTMTAQRSQLINFT-RPY-YVEGVALLTLPNAENKTFDKL- 156 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA------AYRAHRCDAYTGDI 198 + G+ T +++ A ++ + +V +ID A + R DA D+ Sbjct: 157 -----LAGGSATRISILQNVDAETSVHYALPQAQVMQIDTQANVLQALESKRVDAAAVDL 211 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 S + L N P ++ A+ QGD +W V T Sbjct: 212 STVRWLASRN--PDKYFDAGKSWYSMLYGAALRQGDLDWLTFVDQT 255 >gi|170702494|ref|ZP_02893375.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] gi|170132604|gb|EDT01051.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] Length = 306 Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust. Identities = 41/195 (21%), Positives = 77/195 (39%), Gaps = 6/195 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQYLP 82 L I++ G + G V F+ V A+G GF D C + +A+ K ++++P Sbjct: 37 LEKIRQAGLISIGHRETSVPFSYVDASGKVIGFSQDLCDRVIAAVKARTGKPDLQVRFIP 96 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R +Q+ +D+ T R +AF + + GI Sbjct: 97 VTSQNRIPLVQNGTVDLECGVTTNLAARHAQ--VAFSTTFFVATTRLLTRTSSGIRDFPD 154 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+G ++ GTT+E L + + I + E + R AY D L Sbjct: 155 LAGKTVVTNQGTTSERLLRKMNEEKKLNMQIISAKDYGEGRLTLESGRAAAYMMDDVLLA 214 Query: 203 ALKLTNDRPSEHVIL 217 ++ +P++ I+ Sbjct: 215 GVRQLAAKPADWAIV 229 >gi|116619008|ref|YP_819379.1| amino acid ABC transporter periplasmic protein [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116097855|gb|ABJ63006.1| amino acid ABC transporter substrate-binding protein, PAAT family [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 288 Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust. Identities = 65/271 (23%), Positives = 113/271 (41%), Gaps = 30/271 (11%) Query: 9 ILCLIILFFTSFSTNAS--------ILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKG 58 +L +I+ ++T A+ L ++K G + G+ +T L G + K G KG Sbjct: 16 VLAAVIVLGLLWATTAAKKNEEHQDTLQRVEKLGRIIWGVKSDTKLFGLMDTK-TGVSKG 74 Query: 59 FDVDFCRALSSAIFDD---PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 FDVD +AL+ I P +++P+++ + L++ ID T RE + Sbjct: 75 FDVDIAKALTVQISKQTGVPMSAEFVPVSSSSKIQLLKNTNIDGTVSTMTITPEREKIID 134 Query: 116 LAFRPITYFD-GQGFIMHKKKGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYH 172 + YFD GQ ++ K GI S+ ++ + I V GTT A+ K K Sbjct: 135 FTNQ---YFDAGQSILVKKDSGIKSIKDMNDSKYKIIVVVGTTA----AEETKKFAPKAK 187 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + + A +A + A + D + LY N ++ I+ + P A Sbjct: 188 LLAVQDYATGMQALKAGQGQAMSTDNAILYGFATEN---PDYQIVGGTFTHGPYGIAF-- 242 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 D +V T+ A+ T ++ G K I + Sbjct: 243 -DNNQGPMVRETNKALATIKKNGTYNKLIKK 272 >gi|312171723|emb|CBX79981.1| putative glutamate/aspartate ABC transport system, periplasmic component [Erwinia amylovora ATCC BAA-2158] Length = 309 Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust. Identities = 50/231 (21%), Positives = 93/231 (40%), Gaps = 6/231 (2%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQYLP 82 L I K G + G V F+ G+ D+ A+ +AI + P +++ LP Sbjct: 40 LEKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSDAIVAAIKKKLNKPDLQVKMLP 99 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R LQ+ D +T + R+ +F + G ++ K I + Sbjct: 100 VTSQNRIPLLQNGTYDFECGSTTNNIERQKQA--SFSNSIFVVGTRLLVKKGGAIKDFAD 157 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G ++ V +GTT+E+ L M + + + + R A+ D + L Sbjct: 158 LKGKTVVVTSGTTSEILLNKLNDEQKMGMRIVSAKDHGDSFRTLESGRAVAFMMDDALLA 217 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 + +PSE IL S+ + +GD+E+ ++ T T+ E Sbjct: 218 GERAKAKKPSEWEILGTPQSREAYGCMLRKGDSEFKKLMDDTIVQAQTSGE 268 >gi|304405415|ref|ZP_07387074.1| extracellular solute-binding protein family 3 [Paenibacillus curdlanolyticus YK9] gi|304345454|gb|EFM11289.1| extracellular solute-binding protein family 3 [Paenibacillus curdlanolyticus YK9] Length = 284 Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust. Identities = 31/136 (22%), Positives = 54/136 (39%), Gaps = 2/136 (1%) Query: 39 GINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQID 98 G T G + NG GFDV+ R L + D + ++ ++ L+L++ +ID Sbjct: 51 GTGTQFPGVCFIDENGKLTGFDVELVRELDKRL--DGYEFEFKTMDFSNLLLSLETNKID 108 Query: 99 ILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTEL 158 +++ + RE P + F + + K + S+ L G I V + Sbjct: 109 VIAHQMEKNPEREAKFLFNKEPYSIFLSKVAVSAKNNDVKSIEDLKGKKIQVSPTSNQAY 168 Query: 159 TLADYFKAHNMKYHPI 174 L Y + H Y I Sbjct: 169 FLKKYKEEHKDAYDLI 184 >gi|296103152|ref|YP_003613298.1| arginine transporter, periplasmic binding protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057611|gb|ADF62349.1| arginine transporter, periplasmic binding protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 243 Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust. Identities = 58/237 (24%), Positives = 90/237 (37%), Gaps = 36/237 (15%) Query: 11 CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70 LI SFS +A+ I+ F + AN GFDVD AL Sbjct: 4 VLIAALLASFSLSATAAQTIR------FATEASYPPFESIDANNKIVGFDVDLANALCKE 57 Query: 71 I-----FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 I F + + +P +L+ ++ID + D T RE + L P Y+D Sbjct: 58 IDATCTFSNQAFDSLIP--------SLKFRRIDAVMAGMDITPEREKQV-LFTTP--YYD 106 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP----IVFERVEE 181 + +K +SV QL G + VQ GTT + + M HP + ++ + Sbjct: 107 NSALFIGQKGKFTSVDQLKGKKVGVQNGTTHQKFI--------MDKHPEITTVPYDSYQN 158 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTE 236 + R D GD + + ND+ P + + L A+ QG+TE Sbjct: 159 AKLDLQNGRIDGVFGDTAVVTEWLKANDKLAPVGDKVTDKDYFGTGLGIAVRQGNTE 215 >gi|269139977|ref|YP_003296678.1| glutamate and aspartate transporter subunit [Edwardsiella tarda EIB202] gi|267985638|gb|ACY85467.1| glutamate and aspartate transporter subunit [Edwardsiella tarda EIB202] gi|304559810|gb|ADM42474.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Edwardsiella tarda FL6-60] Length = 300 Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust. Identities = 43/195 (22%), Positives = 81/195 (41%), Gaps = 6/195 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQYLP 82 L IK G + G V F+ G+ D+ A+ A+ + P+ +++ LP Sbjct: 31 LQKIKDSGVIVVGHRESSVPFSYYDNQQRVVGYSQDYANAIVDAVKKQLNLPALQVKLLP 90 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R LQ+ D+ +T R+ + AF + G + K+ G+ Sbjct: 91 ITSQNRIPLLQNGTYDVECGSTTHNAERQQQV--AFSNTLFIVGTRLLTAKESGVHDFRD 148 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+G + V +GTT+E+ L + +MK I + + + R A+ D + L Sbjct: 149 LAGKPVVVTSGTTSEIMLNRMNEKDDMKMRIISAKDHGDAFRTLESGRAVAFMMDDALLA 208 Query: 203 ALKLTNDRPSEHVIL 217 + +P VI+ Sbjct: 209 GERAKAKQPERWVIV 223 >gi|330954118|gb|EGH54378.1| glutamine ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae Cit 7] Length = 277 Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust. Identities = 52/240 (21%), Positives = 102/240 (42%), Gaps = 23/240 (9%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGF-AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 +A L D+ + L CG+ + F A + G DVD C+AL+ + +++ Sbjct: 20 VHADQLSDVMSKKSLSCGVYADVPPFSAPDPQTRELVGMDVDLCKALAKHMG---VELEL 76 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 PL+ + R ++ ++D++ N +T R + + F Y + ++ Sbjct: 77 KPLSVEARIPEVKMGRVDVIFANLAYTKSR--ADQIQFSDPYYIAKETLVVRAANADQPK 134 Query: 141 SQLSGASICVQAGTTTE--LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 S G I G+T+E + LAD P+ F ++ +AY A + + G + Sbjct: 135 SCFKGKRISSTKGSTSEQSIRLAD--------ATPVTF---QDTGSAYMALQQNKVVGLV 183 Query: 199 S-ALYALKLTNDRPS---EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 + + A+KL + E I + ++ P+ + QG+ + V+ + AM A E+ Sbjct: 184 TNTMTAIKLVGQAKAGGVELAIAKEPMALEPIGAGMRQGEPAFLAKVNESLRAMEAAGEI 243 >gi|220904827|ref|YP_002480139.1| extracellular solute-binding protein family 3 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869126|gb|ACL49461.1| extracellular solute-binding protein family 3 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 302 Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust. Identities = 46/198 (23%), Positives = 86/198 (43%), Gaps = 12/198 (6%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQYLP 82 L IK+ G + G V F+ + G+ D+ + A+ + P+ K++++P Sbjct: 33 LKKIKETGVITVGHRESSVPFSYYDLQQNVIGYSQDYSNKIVDAVKKQLNMPNLKVRFVP 92 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R LQ+ D +T R+ + F + G + HK GI Sbjct: 93 ITSQNRIPLLQNGTYDFECGSTTNNADRQQQVD--FSNTLFIVGTRLLTHKDSGIKDFDD 150 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR---AHRCDAYTGDIS 199 L G ++ V AGTT+E+ L K ++ K I ++ ++R + R A+ D + Sbjct: 151 LKGKNVAVTAGTTSEMLLN---KMNDEKKLGISIISTKDHGDSFRTVESGRAVAFFIDDA 207 Query: 200 ALYALKLTNDRPSEHVIL 217 L + +P+E VI+ Sbjct: 208 LLAGERAKAKKPAEWVIV 225 >gi|78065025|ref|YP_367794.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia sp. 383] gi|77965770|gb|ABB07150.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia sp. 383] Length = 266 Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust. Identities = 48/196 (24%), Positives = 84/196 (42%), Gaps = 14/196 (7%) Query: 17 FTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 FT+ + +A +L +KK G L+ G+ F +G +GFDVD A++ + Sbjct: 19 FTAVAAHADDLLDSVKKAGVLRVGLEGTYPPFNSRGTSGQLEGFDVDVANAVAGKLG--- 75 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK- 134 K Q++P LQ+ + D++ T R+ +L + P TY Q I K Sbjct: 76 VKTQFIPTEWSGIIAGLQAGKFDVIVNQVTITPQRKEALDFS-EPYTYSAAQ-LIQRKDD 133 Query: 135 -KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 + S+ G + V GT + +A ++ +P E++ ++ A R +A Sbjct: 134 TRNFKSLDDFKGKKLGVTLGTNYD-QMARTVPGIEVQTYPGAPEKLRDLAAG----RIEA 188 Query: 194 YTGDISAL-YALKLTN 208 D L Y +K +N Sbjct: 189 TLDDRLMLPYMIKTSN 204 >gi|326803928|ref|YP_004321746.1| ABC transporter glutamine-binding protein GlnH [Aerococcus urinae ACS-120-V-Col10a] gi|326650155|gb|AEA00338.1| ABC transporter glutamine-binding protein GlnH [Aerococcus urinae ACS-120-V-Col10a] Length = 280 Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust. Identities = 45/211 (21%), Positives = 91/211 (43%), Gaps = 11/211 (5%) Query: 40 INTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99 ++T L GF ++ G+ +GFD+D + L+ I ++ +++ + +K R L++ ID Sbjct: 50 VDTNLFGFYNIE-KGEVEGFDIDIAKELTKRIVGPNAQAEFVEVTSKTRIPLLKNANIDA 108 Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTEL 158 + T+ E + F I + GQ ++ + V L ++ G+T+ Sbjct: 109 II--ATMTISDERKKQVDFSDIYFNAGQALLVGPDVKLKGVEDLGPDHTVLAVKGSTS-- 164 Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218 A K H + + E E A ++ + A T D + L L ++ + P H I Sbjct: 165 --AQRIKEHAPEAKVLELENYSEAFTALKSGQGQAMTTDNAIL--LGISKENPDYH-IAG 219 Query: 219 DIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 ++ P A+ +G ++ ++ MV Sbjct: 220 STFTREPYGIAVNKGQDDFRQAINQGLKDMV 250 >gi|206558740|ref|YP_002229500.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315] gi|198034777|emb|CAR50644.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315] Length = 266 Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust. Identities = 48/196 (24%), Positives = 84/196 (42%), Gaps = 14/196 (7%) Query: 17 FTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 FT+ + +A +L +KK G L+ G+ F +G +GFDVD A++ + Sbjct: 19 FTAVAAHAEDLLDSVKKAGVLRVGLEGTYPPFNSRGTSGQLEGFDVDVANAVAGKLG--- 75 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-- 133 K Q++P LQ+ + D++ T R+ +L + P TY Q I K Sbjct: 76 VKTQFIPTEWSGIIAGLQAGKFDVIVNQVTITPQRKEALDFS-EPYTYSAAQ-LIQRKDD 133 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 + S+ G + V GT + +A ++ +P E++ ++ A R +A Sbjct: 134 TRNFKSLDDFKGKKLGVTLGTNYD-QMARTVPGIEVQTYPGAPEKLRDLAAG----RIEA 188 Query: 194 YTGDISAL-YALKLTN 208 D L Y +K +N Sbjct: 189 TLDDRLMLPYMIKTSN 204 >gi|241762904|ref|ZP_04760967.1| extracellular solute-binding protein family 3 [Acidovorax delafieldii 2AN] gi|241368079|gb|EER62284.1| extracellular solute-binding protein family 3 [Acidovorax delafieldii 2AN] Length = 278 Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust. Identities = 46/192 (23%), Positives = 83/192 (43%), Gaps = 12/192 (6%) Query: 25 SILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 + L IK+RG + G+ N G G + AN G++ + RA++ + + +Q Sbjct: 29 ATLDKIKQRGKVTIGVLVNGGPFGSID-PANQQLVGWNPELARAVAKGLGAEAELVQ--- 84 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + R LQ+ ++D+L + + R +LG A P Y G + K GIS Sbjct: 85 VQTATRVQFLQAGKVDLLIASMELNPDRAETLGYAPTPF-YRVGGTAAVRKDSGISKWDD 143 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G +C+ G++ LA+ + A F+ + A + C A D + ++ Sbjct: 144 LRGKPVCISQGSSFAKPLANDYGAQVQG-----FKSSSDSLLALKGGTCVAAVHDSTLIH 198 Query: 203 ALKLTNDRPSEH 214 L +N S++ Sbjct: 199 PLLRSNPEWSQY 210 >gi|284929259|ref|YP_003421781.1| amino acid ABC transporter substrate-binding protein, PAAT family [cyanobacterium UCYN-A] gi|284809703|gb|ADB95400.1| amino acid ABC transporter substrate-binding protein, PAAT family [cyanobacterium UCYN-A] Length = 261 Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust. Identities = 49/203 (24%), Positives = 86/203 (42%), Gaps = 12/203 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKG 58 MYK F I+ ++ + +AS L +I++R + + NT +GF K +G Sbjct: 7 MYKLFLTFIVSFALVLNHNIVLSAS-LEEIRERKKIIIAVKNNTRPLGFLNSK--NQLEG 63 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 ++D + L+ I D + I + +N +ER + ++DI+ R S + F Sbjct: 64 LEIDLAKQLAKDILGDSNAILFKFVNNQERLQTVIDGEVDIVIARMTIDSFR--SRLINF 121 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y D G I+ KK I S L ++I V + T + F N+ + + Sbjct: 122 SSYYYLDSTG-IITKKHQIKDSSDLFNSTIAVINHSDTISVIRSNFPKTNL----VGVDS 176 Query: 179 VEEIDAAYRAHRCDAYTGDISAL 201 +E + + DA+ D S L Sbjct: 177 YQEAFKLMESQKVDAFAADNSIL 199 >gi|171321021|ref|ZP_02910008.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MEX-5] gi|171093718|gb|EDT38862.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MEX-5] Length = 297 Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust. Identities = 47/244 (19%), Positives = 94/244 (38%), Gaps = 6/244 (2%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 Y+ + + L + + L IK G + G + F+ N G+ Sbjct: 3 YQKAVLMVAALCAFASGAHAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGYSR 62 Query: 62 DFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 +F + A+ S +++ +P+ ++ R +Q+ +DI +T R+ A Sbjct: 63 EFQMKIVDAVKKKLSLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNTERQQQA--A 120 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F + G + K G+ + L G ++ AGTT+E L + + I + Sbjct: 121 FSDTIFVIGTRLMTKKDSGVKDFTDLKGKTVVTTAGTTSERLLRKMNNDKQLGMNIISAK 180 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + + R A+ D + L + +P E VI+ S+ + +GDT++ Sbjct: 181 DHGDSFNTLESGRAVAFMMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDTDF 240 Query: 238 YNIV 241 +V Sbjct: 241 KKVV 244 >gi|170731786|ref|YP_001763733.1| extracellular solute-binding protein [Burkholderia cenocepacia MC0-3] gi|254246506|ref|ZP_04939827.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Burkholderia cenocepacia PC184] gi|124871282|gb|EAY62998.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Burkholderia cenocepacia PC184] gi|169815028|gb|ACA89611.1| extracellular solute-binding protein family 3 [Burkholderia cenocepacia MC0-3] Length = 266 Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust. Identities = 48/196 (24%), Positives = 84/196 (42%), Gaps = 14/196 (7%) Query: 17 FTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 FT+ + +A +L +KK G L+ G+ F +G +GFDVD A++ + Sbjct: 19 FTAVAAHADDLLDSVKKAGVLRVGLEGTYPPFNSRGTSGQLEGFDVDVANAVAGKLG--- 75 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-- 133 K Q++P LQ+ + D++ T R+ +L + P TY Q I K Sbjct: 76 VKTQFIPTEWSGIIAGLQAGKFDVIVNQVTITPQRKEALDFS-EPYTYSAAQ-LIQRKDD 133 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 + S+ G + V GT + +A ++ +P E++ ++ A R +A Sbjct: 134 TRNFKSLDDFKGKKLGVTLGTNYD-QMARTVPGIEVQTYPGAPEKLRDLAAG----RIEA 188 Query: 194 YTGDISAL-YALKLTN 208 D L Y +K +N Sbjct: 189 TLDDRLMLPYMIKTSN 204 >gi|166032314|ref|ZP_02235143.1| hypothetical protein DORFOR_02017 [Dorea formicigenerans ATCC 27755] gi|166028037|gb|EDR46794.1| hypothetical protein DORFOR_02017 [Dorea formicigenerans ATCC 27755] Length = 296 Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust. Identities = 53/222 (23%), Positives = 95/222 (42%), Gaps = 25/222 (11%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L +IKK G + G+ + F V NG+++G+DV F + D K+ ++ A Sbjct: 51 LDEIKKDGTINIGVFSDKNPFGYVDENGEYQGYDVYFANRIGE---DLGVKVNFVSTEAA 107 Query: 87 ERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKKGISSVSQL- 143 R LQ+ ++D++ N T R E+ L + + G + I S+ + Sbjct: 108 NRIEYLQTGKVDLILANFTVTDERAEEVDFALPYMNVAL----GVVSPDSNVIKSLDKWN 163 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD---AYTGDISA 200 S + V +GTT E L + Y I ++ + A A A+ D + Sbjct: 164 SKDQMIVISGTTAETYLTE-------NYPDIPLQKYDSYATAKNALENGNGVAWANDNTE 216 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT---EWYN 239 + A L N + V + ++ +K +APA+ +G+ +W N Sbjct: 217 VIAFALQNKGYT--VGISELGNKDTIAPAVSKGNDTLLDWVN 256 >gi|150020368|ref|YP_001305722.1| extracellular solute-binding protein [Thermosipho melanesiensis BI429] gi|149792889|gb|ABR30337.1| extracellular solute-binding protein, family 3 [Thermosipho melanesiensis BI429] Length = 247 Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust. Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 9/149 (6%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L +IK+RG L G F V + + GFD+D + ++ + + +I LP ++ Sbjct: 24 LSEIKERGKLIIGTEPTFPPFEYVDKDNNIVGFDIDIAKKIAEELGVE-LEIVNLPFDS- 81 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG-QGFIMHKKKGIS--SVSQL 143 A+ S +ID++ T+ +E + + F I YF+ Q ++ K + S S+++L Sbjct: 82 -LIPAIMSDKIDLII--AGMTITKERAKVIDFS-IPYFNANQSIVVRKGESFSPKSLNEL 137 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYH 172 G + VQ GTT +L ++D + ++ Sbjct: 138 VGKRVAVQLGTTGDLVVSDIKRIKITRFQ 166 >gi|85707349|ref|ZP_01038432.1| putative ABC transporter periplasmic amino acid-binding protein [Roseovarius sp. 217] gi|85668157|gb|EAQ23035.1| putative ABC transporter periplasmic amino acid-binding protein [Roseovarius sp. 217] Length = 268 Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust. Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 7/153 (4%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 I L+ + + + A L DI G L+C + + GFDVD+C L+ Sbjct: 7 IAALLGMTSIAGTAQADKLDDIISSGTLRCAVVLDFPPMGMRDESNVPIGFDVDYCNDLA 66 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ- 127 +A+ + ++I P ER AL S ++D+ +T TL R ++G + + YF + Sbjct: 67 AALGVE-AEIVETPF--PERIPALMSGRVDVGVASTSDTLERAKTVGFS---VPYFAFEM 120 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 + GISS + G ++ AGT + L Sbjct: 121 AVTANNATGISSYEGMKGFTVGAVAGTYEAIAL 153 >gi|163747482|ref|ZP_02154833.1| putative ABC transporter periplasmic amino acid-binding protein [Oceanibulbus indolifex HEL-45] gi|161379238|gb|EDQ03656.1| putative ABC transporter periplasmic amino acid-binding protein [Oceanibulbus indolifex HEL-45] Length = 268 Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust. Identities = 41/150 (27%), Positives = 71/150 (47%), Gaps = 13/150 (8%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK---GFDVDFCRALSSAIFDDPSK 77 + A L DI G L+C + ++ F + + D GFDVD+C L++A+ D ++ Sbjct: 19 AAQADKLDDIISSGTLRCAV---VLDFPPMGSRDDTNTPVGFDVDYCNDLAAALGVD-AE 74 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KG 136 I P +R AL S + D+ +T TL R ++G + + YF ++ ++ G Sbjct: 75 IVETPF--PDRIPALVSGRADVGVASTSDTLERAKTVGFS---VPYFAFTNVVLTREDAG 129 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKA 166 + S L G ++ AGT + L + A Sbjct: 130 VDSFESLKGKTVGSVAGTFEAIALEEQIDA 159 >gi|107024193|ref|YP_622520.1| extracellular solute-binding protein [Burkholderia cenocepacia AU 1054] gi|116688482|ref|YP_834105.1| extracellular solute-binding protein [Burkholderia cenocepacia HI2424] gi|105894382|gb|ABF77547.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia AU 1054] gi|116646571|gb|ABK07212.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia HI2424] Length = 266 Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust. Identities = 48/196 (24%), Positives = 84/196 (42%), Gaps = 14/196 (7%) Query: 17 FTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 FT+ + +A +L +KK G L+ G+ F +G +GFDVD A++ + Sbjct: 19 FTAVAAHADDLLDSVKKAGVLRVGLEGTYPPFNSRGTSGQLEGFDVDVANAVAGKLG--- 75 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-- 133 K Q++P LQ+ + D++ T R+ +L + P TY Q I K Sbjct: 76 VKTQFIPTEWSGIIAGLQAGKFDVIVNQVTITPQRKEALDFS-EPYTYSAAQ-LIQRKDD 133 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 + S+ G + V GT + +A ++ +P E++ ++ A R +A Sbjct: 134 TRNFKSLDDFKGKKLGVTLGTNYD-QMARTVPGIEVQTYPGAPEKLRDLAAG----RIEA 188 Query: 194 YTGDISAL-YALKLTN 208 D L Y +K +N Sbjct: 189 TLDDRLMLPYMIKTSN 204 >gi|282851032|ref|ZP_06260406.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus gasseri 224-1] gi|282557984|gb|EFB63572.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus gasseri 224-1] Length = 252 Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust. Identities = 47/237 (19%), Positives = 96/237 (40%), Gaps = 12/237 (5%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCR 65 +IL + L ++ ++K+ + G+ +T L G +K G +GF+VD Sbjct: 12 TILLSVFLLSACRKNTRNVYQEVKRSNEITWGVKADTRLFGLMSIKT-GKIEGFEVDLAN 70 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 AL+ + +K ++ AK + L++ ID + T+ E + F ++ Sbjct: 71 ALTKEMLGKDAKANFVQTTAKTKIPLLKNGNIDAVL--AAMTITPERKKQIDFSEPYFYA 128 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 GQ ++ + I +V L+G + GTT + + K + F+ + A Sbjct: 129 GQSLLVKEDSTIKNVQDLNGKTALAVKGTTAVANVKKFAP----KAKVLEFDDYGQAFTA 184 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 +A + A T D L + N + ++ + P A+ +G + N ++ Sbjct: 185 LKAGQGQAMTTDNGLLAGIATEN---KGYKLVGGTYTNEPYGIAVNKGQKQMKNAIN 238 >gi|271500708|ref|YP_003333733.1| family 3 extracellular solute-binding protein [Dickeya dadantii Ech586] gi|270344263|gb|ACZ77028.1| extracellular solute-binding protein family 3 [Dickeya dadantii Ech586] Length = 278 Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust. Identities = 32/131 (24%), Positives = 59/131 (45%), Gaps = 5/131 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L + +RG L+ G F G+ G+DVD +AL+ A+ K++ + Sbjct: 40 SALQTVLQRGTLRVGDCLSFAPFGFYDQAGNPDGYDVDLAKALAKAM---GVKLEMVNTT 96 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 + R LQ+ ++D++ N L R + ++F + ++ K GI S ++ Sbjct: 97 SANRIPNLQTNKVDVVFCNFTRNLER--AKEISFTAPYVVASEAMLVRKNSGIQSAHDMA 154 Query: 145 GASICVQAGTT 155 G +I G+T Sbjct: 155 GKTIATVKGST 165 >gi|172061134|ref|YP_001808786.1| extracellular solute-binding protein [Burkholderia ambifaria MC40-6] gi|171993651|gb|ACB64570.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MC40-6] Length = 306 Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust. Identities = 41/195 (21%), Positives = 76/195 (38%), Gaps = 6/195 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQYLP 82 L I++ G + G V F+ V A+G GF D C + + + K ++++P Sbjct: 37 LEKIRQAGLISIGHRETSVPFSYVDASGKVIGFSQDLCDRVIATVKARTGKPDLQVRFIP 96 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R +Q+ +D+ T R + AF + + GI Sbjct: 97 VTSQNRIPLVQNGTVDLECGVTTNLAARHAQV--AFSTTFFVATTRLLTRTSSGIRDFPD 154 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+G ++ GTT+E L + M I + E + R AY D L Sbjct: 155 LAGKTVVTNQGTTSERLLRKMNEEKKMNMQIISAKDYGEGRLTLESGRAAAYMMDDVLLA 214 Query: 203 ALKLTNDRPSEHVIL 217 ++ +P++ I+ Sbjct: 215 GVRQLAAKPADWAIV 229 >gi|58698602|ref|ZP_00373499.1| amino acid ABC transporter, periplasmic amino acid-binding protein, putative [Wolbachia endosymbiont of Drosophila ananassae] gi|225630093|ref|YP_002726884.1| amino acid ABC transporter, periplasmic amino acid binding protein [Wolbachia sp. wRi] gi|58534872|gb|EAL58974.1| amino acid ABC transporter, periplasmic amino acid-binding protein, putative [Wolbachia endosymbiont of Drosophila ananassae] gi|225592074|gb|ACN95093.1| amino acid ABC transporter, periplasmic amino acid binding protein [Wolbachia sp. wRi] Length = 244 Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust. Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 17/121 (14%) Query: 49 EVKANGDWKGFDVDFCRALS-----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103 E NG + GFD++ + ++ AIF D +Q+ + F ALQS +D Sbjct: 40 EYYENGKFTGFDIELAQLVAKELGKEAIFKD---MQFSTI-----FAALQSNSVDAAIST 91 Query: 104 TDWTLLREISLGLAFRPITYFDGQ-GFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162 T RE + + +Y+ G+ G + HK K I+ ++ L+ I VQ GT E+ L + Sbjct: 92 IGSTEEREKNFDFSN---SYYTGEFGILYHKNKPIAGINNLTHKKIAVQLGTVMEIWLKE 148 Query: 163 Y 163 + Sbjct: 149 H 149 >gi|256375607|ref|YP_003099267.1| extracellular solute-binding protein family 3 [Actinosynnema mirum DSM 43827] gi|255919910|gb|ACU35421.1| extracellular solute-binding protein family 3 [Actinosynnema mirum DSM 43827] Length = 274 Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust. Identities = 56/243 (23%), Positives = 101/243 (41%), Gaps = 11/243 (4%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 +L TS + + ++G + G+ G + +G+ +GFD+D R +++ + Sbjct: 16 VLALTSCGADDDTVLGRAEQGRITIGVAHDQPGLGLRRQDGNLRGFDIDVARYVATELGV 75 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL-LREISLGLAFRPITYFDGQG-FIM 131 S I ++ ++R L S ++D++ T RE+ + F Y GQ ++ Sbjct: 76 PESGITWVEAPPEDRERLLTSGEVDLVVNGYSITPKRREV---IDFAGPYYTAGQDLLVL 132 Query: 132 HKKKGISSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190 + I+ LS G +C GTT+ + D F A N+K + R E A A Sbjct: 133 IDNQEITGPDSLSRGQRLCSVTGTTSAQYVKDTF-AKNVKL--VEQPRFSECVTALLAGE 189 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 DA T D L N P ++ + S+ + +G+ E + V+ MV Sbjct: 190 VDALTTDDVVLAGYAAQN--PELLRVVGEPFSEEEYGIGLPKGEQETKDAVTAALRKMVD 247 Query: 251 AEE 253 + E Sbjct: 248 SGE 250 >gi|134294561|ref|YP_001118296.1| extracellular solute-binding protein [Burkholderia vietnamiensis G4] gi|134137718|gb|ABO53461.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia vietnamiensis G4] Length = 266 Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust. Identities = 48/196 (24%), Positives = 84/196 (42%), Gaps = 14/196 (7%) Query: 17 FTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 FT+ + +A +L +KK G L+ G+ F +G +GFDVD A++ + Sbjct: 19 FTAVAAHADDLLDSVKKAGVLRVGLEGTYPPFNSRGTSGQLEGFDVDVANAVAGKLG--- 75 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-- 133 K Q++P LQ+ + D++ T R+ +L + P TY Q I K Sbjct: 76 VKTQFVPTEWSGIIAGLQAGKFDVIVNQVTITPQRKEALDFS-EPYTYSAAQ-LIQRKDD 133 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 + S+ G + V GT + +A ++ +P E++ ++ A R +A Sbjct: 134 TRNFKSLEDFKGKKLGVTLGTNYD-QMARSVPGIEVQTYPGAPEKLRDLAAG----RIEA 188 Query: 194 YTGDISAL-YALKLTN 208 D L Y +K +N Sbjct: 189 TLDDRLMLPYMIKTSN 204 >gi|115358997|ref|YP_776135.1| extracellular solute-binding protein [Burkholderia ambifaria AMMD] gi|115284285|gb|ABI89801.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia ambifaria AMMD] Length = 266 Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust. Identities = 43/193 (22%), Positives = 84/193 (43%), Gaps = 18/193 (9%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 ++LC++ + S A +L +K+ G LK + F A G +GFDVD +A+ Sbjct: 15 ALLCVV----ATASHAADLLDTVKQAGVLKIALEGTYPPFDYRNAEGQLEGFDVDVAKAV 70 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 ++ + P Q++ LQ+ + D++ T R+ +L + P Y Q Sbjct: 71 AARLGVKP---QFVTTEWSGILAGLQAGKFDVIVNQVAITPSRQQALDFSM-PYVYSSAQ 126 Query: 128 GFIMHKK---KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ ++ + S+ +L G + V G+ + L A +++ +P E + ++ A Sbjct: 127 --LLQRQNDTRAFKSLDELKGKKVGVTMGSNY-VDLVKTVPAIDLQVYPGTPENLRDLAA 183 Query: 185 AYRAHRCDAYTGD 197 R DA D Sbjct: 184 G----RIDAAVND 192 >gi|331015352|gb|EGH95408.1| glutamine ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 277 Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust. Identities = 56/241 (23%), Positives = 103/241 (42%), Gaps = 27/241 (11%) Query: 23 NASILGDIKKRGFLKCGINTGLVGF-AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 +A L D+ + L CG+ + F A + G DVD C+AL+ + +++ Sbjct: 21 HADQLSDVMSKKSLSCGVYADVPPFSAPDPKTRELVGMDVDLCKALAKHMG---VELELK 77 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 PL+ + R ++ ++D++ N +T R + + F Y + ++ S Sbjct: 78 PLSVEARIPEVKMGRVDVIFANLAYTKSR--ADQIQFSDPYYIAKETLVVRAANADQPKS 135 Query: 142 QLSGASICVQAGTTTE--LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 I G+T+E + LAD P+ F ++ +AY A + + G ++ Sbjct: 136 FFKDKRISSTKGSTSEQSIRLAD--------ATPVTF---QDTGSAYMALQQNKVVGLVT 184 Query: 200 -ALYALKLTNDRPSEHVILPDIISKSPLAPAII-----QGDTEWYNIVSWTHYAMVTAEE 253 + A+KL + V L I+K P+A I QG+ + V+ + YAM A E Sbjct: 185 NTMTAIKLVGQAKASGVEL--AIAKEPMALEPIGAGMRQGEPAFLAKVNESLYAMEAAGE 242 Query: 254 L 254 + Sbjct: 243 I 243 >gi|48428787|gb|AAT42435.1| ABC-type amino acid transport, periplasmic component [Collimonas fungivorans Ter331] Length = 277 Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust. Identities = 50/227 (22%), Positives = 93/227 (40%), Gaps = 20/227 (8%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD---PS-KIQYL 81 +L I+ + G F+ V + G+ +D C ++ A+ P I Y+ Sbjct: 42 VLTKIRDSKTITIGYREASFPFSFVDQDKKPVGYAIDLCLKIADAVKQQLKLPQLNIVYV 101 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 P+ + R + S +ID+ +T R + +F + ++ + I + Sbjct: 102 PVTSSNRIDMIASGKIDLECGSTTNNAERRKQV--SFTIAHFMASSRMLVRVEDKIKNWP 159 Query: 142 QLSGASICVQAGTTTELTLAD--YFKAHNM-----KYHPIVFERVEEIDAAYRAHRCDAY 194 L + GTT+ +L D ++ NM + H F+ VE+ A DA+ Sbjct: 160 DLRDKKVATTKGTTSVKSLVDRGQVRSLNMTIVEGRDHNESFKMVEDKAA-------DAF 212 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 D LY LK T P+ + I+ + ++ P A + +GDT + +V Sbjct: 213 VMDDVLLYGLKATAKDPAAYAIVGEPLTTEPYAIMLPKGDTSYKAVV 259 >gi|295835696|ref|ZP_06822629.1| glutamate-binding protein [Streptomyces sp. SPB74] gi|295825636|gb|EDY45043.2| glutamate-binding protein [Streptomyces sp. SPB74] Length = 291 Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust. Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 5/144 (3%) Query: 31 KKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 K RG L G E A+G + GFD++ + +++ + ++I + + + R Sbjct: 47 KARGRLVVGAKEDQPYLGEKDPASGRYTGFDIEIAKMVAAGLGFPANRISFRTIASANRE 106 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASI 148 +LQ+ QID R+ +G A Y GQG + K + GI + L G + Sbjct: 107 TSLQNGQIDYYVGTYTINDNRKKLVGFAG--PYYLAGQGLLERKDEDGIKGPADLDGKRV 164 Query: 149 CVQAGTTT-ELTLADYFKAHNMKY 171 C AG+T + DY KA + Y Sbjct: 165 CSAAGSTPYQRIQHDYPKADLVSY 188 >gi|170691131|ref|ZP_02882297.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] gi|170144380|gb|EDT12542.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] Length = 277 Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust. Identities = 38/173 (21%), Positives = 73/173 (42%), Gaps = 9/173 (5%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L + +RG L+ G F +G G+DVD + L+ + K++ + Sbjct: 39 STLKQVLQRGTLRVGDCLTFAPFGFYNKDGQPDGYDVDLAKELAKQM---GVKLEVVNTT 95 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 + R LQ+ ++D++ N L R + +AF + ++ K GI S++ ++ Sbjct: 96 SANRIPNLQTSKVDVVFCNFTRNLER--AKEIAFTNPYVVASEALLVKKSSGIKSINDMA 153 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 +I G+T D ++ NM+ F+ + A + + DA D Sbjct: 154 NRTIATVKGSTN----GDEVRSLNMQVKIQEFDSSQAAILAVKQGQADAMIED 202 >gi|307709177|ref|ZP_07645636.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus mitis SK564] gi|307620123|gb|EFN99240.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus mitis SK564] Length = 279 Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust. Identities = 31/126 (24%), Positives = 61/126 (48%), Gaps = 7/126 (5%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 +++G + G + V + NG + GFD+D +A+S + K+Q+ P++ + Sbjct: 37 QEQGSITIGFDNTFVPMGFEEKNGQYTGFDIDLAQAVSEKL---GFKVQFQPIDWDMKET 93 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASIC 149 LQ+ ID + T R + + I Y + Q ++ KK + I SV ++ ++ Sbjct: 94 ELQNGTIDAIWNGYSATNERREKVAFS---IPYMENQQVLVAKKSQQIHSVEEMKDKALG 150 Query: 150 VQAGTT 155 QAG++ Sbjct: 151 AQAGSS 156 >gi|238853598|ref|ZP_04643967.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus gasseri 202-4] gi|238833742|gb|EEQ26010.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus gasseri 202-4] Length = 263 Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust. Identities = 42/140 (30%), Positives = 63/140 (45%), Gaps = 5/140 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 AS IK+RG L G++ V + NG GFDVD A+ I P Q + Sbjct: 28 ASSWQKIKERGTLVIGVDDSFVPMDFRQKNGKLVGFDVDLATAVCKEIGLKPD-FQTIDW 86 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 + KE L++ ID++ T R + + RP D Q + KK+ I+S Q+ Sbjct: 87 SMKE--TELRNGTIDVIWNGYTKTKARAKKVAFS-RPYLEND-QILVTRKKEQINSYRQM 142 Query: 144 SGASICVQAGTTTELTLADY 163 G + VQ G++ L +Y Sbjct: 143 KGRILGVQTGSSGADDLDNY 162 >gi|319950339|ref|ZP_08024258.1| extracellular solute-binding protein family 3 [Dietzia cinnamea P4] gi|319436031|gb|EFV91232.1| extracellular solute-binding protein family 3 [Dietzia cinnamea P4] Length = 273 Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust. Identities = 45/216 (20%), Positives = 89/216 (41%), Gaps = 8/216 (3%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 LK GI G +K ++ GFDVD R ++ + I+++ + +R L++ Sbjct: 34 LKVGIKFDQPGLG-LKEGNEYTGFDVDVARYIAEKLGTAEDDIEWIQAPSAQRETLLETG 92 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGT 154 Q+D++ T R+ +G F + GQ ++ I+ L G +C G+ Sbjct: 93 QVDMIVATYSITDSRKEKVG--FAGPYFIAGQDLLVRADDDSITGPDSLDGKRLCSVTGS 150 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T+ T+ + N++ F E +A ++ DA T D + L + + Sbjct: 151 TSAQTVKEKVPGVNLQE----FGTYSECVSALVSNAVDALTTDDTILAGYASQDQYQGQL 206 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 ++ ++ I +GDTE ++ M++ Sbjct: 207 KVVGAPFTEERYGVGIAKGDTEKCEQINEAIREMIS 242 >gi|226359768|ref|YP_002777546.1| ABC transporter substrate-binding protein [Rhodococcus opacus B4] gi|226238253|dbj|BAH48601.1| putative ABC transporter substrate-binding protein [Rhodococcus opacus B4] Length = 329 Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust. Identities = 31/125 (24%), Positives = 55/125 (44%), Gaps = 5/125 (4%) Query: 29 DIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 +I+ RG L + NT L F + G GF VD R ++ + DP+K+++ PL + Sbjct: 89 EIRARGSLVVAVDQNTNLFSFRD-PTTGTLTGFGVDLAREVARDLLGDPAKVEFRPLGSG 147 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 + L + D++ R L E +AF + + ++ GIS + L+ Sbjct: 148 DGAEMLAHRDADMIVRPV--ALPCESPQDVAFSTVYLETPRRLVVRVGSGISEPADLARR 205 Query: 147 SICVQ 151 +C Sbjct: 206 RVCTH 210 >gi|15888714|ref|NP_354395.1| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|15156456|gb|AAK87180.1| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 261 Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust. Identities = 36/162 (22%), Positives = 69/162 (42%), Gaps = 13/162 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + ++I + + S + A LGDI RG ++ + F V + +G+D+D Sbjct: 4 RRLLLAIAAVSVTLGFSPAAFADALGDISSRGTIRVAVPQDFPPFGSVGTDMAPQGYDID 63 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI----LSRNTDWTLLREISLGLAF 118 + + K++ +P+ + R LQ+ ++D+ L +N D + I A+ Sbjct: 64 VANLIGEKLG---VKVELVPVTSANRVPYLQTNKVDLVISSLGKNPDRE--KVIDFSTAY 118 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 P +F+ G ++ LSG +I V G +L L Sbjct: 119 AP--FFN--GVFAPDSVTVAKAEDLSGKTIGVTRGAVEDLEL 156 >gi|325570409|ref|ZP_08146186.1| glutamate ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus casseliflavus ATCC 12755] gi|325156619|gb|EGC68796.1| glutamate ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus casseliflavus ATCC 12755] Length = 269 Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust. Identities = 46/210 (21%), Positives = 94/210 (44%), Gaps = 13/210 (6%) Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 +T L G ++ A + +GFD+D RA++ I ++ + +K R L++ ID + Sbjct: 48 DTRLFGLMDI-ATREVRGFDIDIARAITEKILGRDGNAIFVEVTSKTRIPLLKNGNIDAI 106 Query: 101 SRNTDWTLLREISLGLAFRPITYFD-GQGFIMHKKKGISSVSQLSG-ASICVQAGTTTEL 158 T+ E + F + YFD GQ ++ K I + L+ ++ V G+T+ + Sbjct: 107 IAT--MTITEERKKQVDFSDV-YFDAGQSLLVAKDSPIQGIEDLTADTTVLVVKGSTSAV 163 Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218 + + + + E E A ++ + DA D + L L + ++ P+ H++ Sbjct: 164 NI----REAAPEAQILELENYAEAFTALQSGQGDAMITDNAIL--LGMASENPNYHLV-G 216 Query: 219 DIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 + ++ P AI +G + + V+ M Sbjct: 217 ETFTEEPYGIAINKGQKPFLDAVNQALREM 246 >gi|170703105|ref|ZP_02893924.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] gi|170131984|gb|EDT00493.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] Length = 297 Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust. Identities = 48/240 (20%), Positives = 95/240 (39%), Gaps = 11/240 (4%) Query: 11 CLIILFFTSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 L++ +F++ A L IK G + G + F+ N G+ +F Sbjct: 7 VLMVAALCAFASGAHAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGYSREFQM 66 Query: 66 ALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + A+ S +++ +P+ ++ R +Q+ +DI +T R+ AF Sbjct: 67 KIVDAVKKKLSLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNTERQQQA--AFSDT 124 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + G + K G+ + L G ++ AGTT+E L + + I + + Sbjct: 125 IFVIGTRLMTKKDSGVKDFADLKGKTVVTTAGTTSERLLRKMNNDKQLGMNIISAKDHGD 184 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + R A+ D + L + +P E VI+ S+ + +GDT++ +V Sbjct: 185 SFNTLESGRAVAFMMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDTDFKKVV 244 >gi|289627074|ref|ZP_06460028.1| glutamine ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289646271|ref|ZP_06477614.1| glutamine ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. aesculi str. 2250] gi|298486960|ref|ZP_07005013.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298158522|gb|EFH99589.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330866809|gb|EGH01518.1| glutamine ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 277 Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust. Identities = 60/257 (23%), Positives = 110/257 (42%), Gaps = 28/257 (10%) Query: 8 SILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGF-AEVKANGDWKGFDVDFCR 65 S+L + L + S +A L D+ + L CG+ + F A + G DVD C+ Sbjct: 5 SLLVALALSPLAVSVAHADQLSDVMSKKSLSCGVYADVPPFSAPDPKTRELVGMDVDLCK 64 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 AL+ + +++ PL+ + R ++ ++D++ N +T R + + F Y Sbjct: 65 ALAKHMG---VELELKPLSVEARIPEVKMGRVDVIFANLAYTKSR--ADQIQFSDPYYIA 119 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTE--LTLADYFKAHNMKYHPIVFERVEEID 183 + ++ S G I G+T+E + LAD P+ F ++ Sbjct: 120 KETLVVRAANADQPKSFFKGKRISSTKGSTSEQSIRLAD--------ATPVTF---QDTG 168 Query: 184 AAYRAHRCDAYTGDIS-ALYALKLTNDRPSEHVILPDIISKSPLAPAII-----QGDTEW 237 +AY A + + G ++ + A+KL + V L I+K P+A I QG+ + Sbjct: 169 SAYMALQQNKVVGLVTNTMTAIKLVGQAKASGVEL--AIAKEPMALEPIGAGMRQGEPAF 226 Query: 238 YNIVSWTHYAMVTAEEL 254 V+ + AM A E+ Sbjct: 227 LAKVNESLRAMEAAGEI 243 >gi|293602769|ref|ZP_06685209.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] gi|292818785|gb|EFF77826.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] Length = 260 Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust. Identities = 34/152 (22%), Positives = 69/152 (45%), Gaps = 5/152 (3%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 LC + T+A L DI K G +K + F V ++ G+D+D ++ Sbjct: 10 LCTAASLLAAPLTHADTLDDIVKAGVIKIAVPQDFPPFGSVGSDMKPLGYDIDTAALIAK 69 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 + K++ +P+ + R LQ++++D++ + RE ++ + +F+G Sbjct: 70 QLG---VKLELVPVTSANRVPYLQTRKVDLVISSLGKNAEREKAIDFSDAYAPFFNGVFG 126 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 K +SS + L+G +I V G ++ L+ Sbjct: 127 PADLK--VSSAADLAGKTIGVTRGAVEDIELS 156 >gi|256829597|ref|YP_003158325.1| extracellular solute-binding protein family 3 [Desulfomicrobium baculatum DSM 4028] gi|256578773|gb|ACU89909.1| extracellular solute-binding protein family 3 [Desulfomicrobium baculatum DSM 4028] Length = 273 Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust. Identities = 54/221 (24%), Positives = 93/221 (42%), Gaps = 18/221 (8%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L +I KRG L+ G++ G + F G+ GFDVD + ++ A+ K+ + + Sbjct: 32 STLNEILKRGELRVGLDAGYMPFEMTDKKGEIVGFDVDMAKEMAKAM---GVKLTIVNTD 88 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQ 142 AL + + DI+ + T+ +E +L + F GQ +++KK I+S Sbjct: 89 YDGIIPALMADKFDIII--SGMTVNQERNLQINFADPYIVVGQAILLNKKHEGAITSYKD 146 Query: 143 LSGASICV--QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA--HRCDAYTGDI 198 L+ V + GTT E K FE+ E D A + DA+ D+ Sbjct: 147 LNDPKFTVVSRIGTTGEQAAKRMIPKAQYKS----FEK--ESDGAMEVVNGQADAFVYDL 200 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + + V+L + PL + +GD ++ N Sbjct: 201 P-FNVVFMAQQGGKNLVLLDKPFTYEPLGFGVKKGDPDFLN 240 >gi|71737113|ref|YP_274662.1| glutamine ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71557666|gb|AAZ36877.1| glutamine ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 277 Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust. Identities = 60/257 (23%), Positives = 110/257 (42%), Gaps = 28/257 (10%) Query: 8 SILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGF-AEVKANGDWKGFDVDFCR 65 S+L + L + S +A L D+ + L CG+ + F A + G DVD C+ Sbjct: 5 SLLVALALSPLAVSFAHADQLSDVMSKKSLSCGVYADVPPFSAPDPKTRELVGMDVDLCK 64 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 AL+ + +++ PL+ + R ++ ++D++ N +T R + + F Y Sbjct: 65 ALAKHMG---VELELKPLSVEARIPEVKMGRVDVIFANLAYTKSR--ADQIQFSDPYYIA 119 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTE--LTLADYFKAHNMKYHPIVFERVEEID 183 + ++ S G I G+T+E + LAD P+ F ++ Sbjct: 120 KETLVVRAANADQPKSFFKGKRISSTKGSTSEQSIRLAD--------ATPVTF---QDTG 168 Query: 184 AAYRAHRCDAYTGDIS-ALYALKLTNDRPSEHVILPDIISKSPLAPAII-----QGDTEW 237 +AY A + + G ++ + A+KL + V L I+K P+A I QG+ + Sbjct: 169 SAYMALQQNKVVGLVTNTMTAIKLVGQAKTSGVEL--AIAKEPMALEPIGAGMRQGEPAF 226 Query: 238 YNIVSWTHYAMVTAEEL 254 V+ + AM A E+ Sbjct: 227 LAKVNESLRAMEAAGEI 243 >gi|292487346|ref|YP_003530218.1| putative ABC transporter periplasmic protein [Erwinia amylovora CFBP1430] gi|292898591|ref|YP_003537960.1| ABC transporter substrate-binding protein [Erwinia amylovora ATCC 49946] gi|291198439|emb|CBJ45547.1| ABC transporter, substrate-binding protein [Erwinia amylovora ATCC 49946] gi|291552765|emb|CBA19810.1| putative ABC transport system, periplasmic component [Erwinia amylovora CFBP1430] gi|312171452|emb|CBX79710.1| putative ABC transport system, periplasmic component [Erwinia amylovora ATCC BAA-2158] Length = 261 Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust. Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 10/147 (6%) Query: 17 FTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 F+ S A L D++KRG L+ + F V + +G+D+D L+ + Sbjct: 15 FSQISVVQADQLQDVEKRGVLRVAVPQDFPPFGSVGTDLQPQGYDIDMATYLAKQM---K 71 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE--ISLGLAFRPITYFDGQGFIMHK 133 K+Q +P+ + R LQ+ ++D++ + RE I A+ P +F G K Sbjct: 72 LKLQLVPVTSANRVPYLQTGKVDLVISSLGKNPEREKVIDFSRAYAP--FF--LGVFGAK 127 Query: 134 KKGISSVSQLSGASICVQAGTTTELTL 160 + + LSG S+ V G ++ L Sbjct: 128 PGALKDAAGLSGKSVGVTRGAVEDMVL 154 >gi|115350421|ref|YP_772260.1| extracellular solute-binding protein [Burkholderia ambifaria AMMD] gi|170698931|ref|ZP_02889991.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] gi|172059445|ref|YP_001807097.1| extracellular solute-binding protein [Burkholderia ambifaria MC40-6] gi|115280409|gb|ABI85926.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia ambifaria AMMD] gi|170136184|gb|EDT04452.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] gi|171991962|gb|ACB62881.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MC40-6] Length = 266 Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust. Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 16/197 (8%) Query: 17 FTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 FT+ + +A +L +KK G L+ G+ F +G +GFDVD A++ + Sbjct: 19 FTAVAAHAEDLLDSVKKAGVLRVGLEGTYPPFNSRGTSGQLEGFDVDVANAVAGKLG--- 75 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK- 134 K Q++P LQ+ + D++ T R+ L + +P TY Q ++ +K Sbjct: 76 VKTQFIPTEWSGIIAGLQAGKFDVIVNQVTITPQRKEVLDFS-QPYTYSAAQ--LIQRKD 132 Query: 135 --KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 + S+ G + V GT + +A ++ +P E++ ++ A R + Sbjct: 133 DTRNFKSLEDFKGKKLGVTLGTNYD-QMARSVPGIEVQTYPGAPEKLRDLAAG----RIE 187 Query: 193 AYTGDISAL-YALKLTN 208 A D L Y +K +N Sbjct: 188 ATLDDRLMLPYMIKTSN 204 >gi|332041717|gb|EGI78069.1| extracellular solute-binding protein [Hylemonella gracilis ATCC 19624] Length = 297 Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust. Identities = 46/228 (20%), Positives = 96/228 (42%), Gaps = 3/228 (1%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L IK G + G+ + +G + G+ V+ C+ + +I + ++Y P+ + Sbjct: 29 LAKIKSSGKVVMGVRESSPPLSYTLGDGKYTGYHVELCQNILKSIAPG-AAVEYTPVTSA 87 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 R +Q+ +DI +T R+ + A TY + I S++ L G Sbjct: 88 NRIPLVQNGTVDIECGSTTNNATRQKDVSFAL--TTYVTEVRTAVKSTSKIKSIADLEGK 145 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 ++ GTT+ L + + ++K+ + + + + R DA+ D + L L Sbjct: 146 TVATTTGTTSVALLRKHKRGADIKFTEVYGKDHADSFLLLESGRADAFVMDDNLLAGLIA 205 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 + P + VI+ + ++ P+A + + D + V A + + EL Sbjct: 206 GSKNPKDFVIVGETLNVEPIAIMVRKDDPAFKKAVDDYIRAAIKSGEL 253 >gi|300362124|ref|ZP_07058301.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus gasseri JV-V03] gi|300354743|gb|EFJ70614.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus gasseri JV-V03] Length = 273 Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust. Identities = 58/286 (20%), Positives = 113/286 (39%), Gaps = 29/286 (10%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCR 65 ++L + L ++ ++KK + G+ +T L G +K G +GF+VD Sbjct: 12 TVLLSVFLLSACQKNTRNVYQEVKKSNEITWGVKADTRLFGLMSIKT-GKIEGFEVDLAN 70 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 AL+ + +K ++ AK + L++ ID + T+ E + F ++ Sbjct: 71 ALTKEMLGKNAKASFVQTTAKTKIPLLKNGNIDAVL--AAMTITTERKKQIDFSNPYFYA 128 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 GQ ++ + I +V L+G GTT + + K + F+ + A Sbjct: 129 GQSLLVKEDSSIRNVQDLNGKIALAVKGTTAVANVKKFAP----KAKVLEFDDYGQAFTA 184 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 +A + A T D L + N + ++ + P A+ +G + N ++ Sbjct: 185 LKAGQGQAMTTDNGLLAGIATEN---KGYKLVGGTYTNEPYGIAVNKGQKQMKNAIN--- 238 Query: 246 YAMVTAEELGITQKNINQVSKDTT-NPDVQRFLGIDKSSNIGEALG 290 + +N++ KD T N V+++ NI EA G Sbjct: 239 -------------RALNKLKKDGTYNALVKKWFSGIPGFNIKEAEG 271 >gi|186477008|ref|YP_001858478.1| extracellular solute-binding protein [Burkholderia phymatum STM815] gi|184193467|gb|ACC71432.1| extracellular solute-binding protein family 3 [Burkholderia phymatum STM815] Length = 266 Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust. Identities = 34/134 (25%), Positives = 62/134 (46%), Gaps = 9/134 (6%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 +I K G LK + F V + +G+D+D L+ ++ K++ +P+N+ R Sbjct: 36 NITKSGVLKVAVPEDYPPFGSVGPDLKPQGYDIDTAALLAKSMN---VKLELVPVNSANR 92 Query: 89 FLALQSKQIDILSRNTDWTLLRE--ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 LQ+ ++D++ + T RE I A+ P Y+ QG +SS + L+G Sbjct: 93 IPYLQTNKVDLVISSLGKTAEREKVIDFSSAYAP--YY--QGVFGPADLKVSSPADLTGK 148 Query: 147 SICVQAGTTTELTL 160 ++ G E+ L Sbjct: 149 TVGATRGALEEIAL 162 >gi|161525883|ref|YP_001580895.1| extracellular solute-binding protein [Burkholderia multivorans ATCC 17616] gi|189349395|ref|YP_001945023.1| polar amino acid transporter substrate-binding protein [Burkholderia multivorans ATCC 17616] gi|221202318|ref|ZP_03575352.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia multivorans CGD2M] gi|221209132|ref|ZP_03582126.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia multivorans CGD2] gi|160343312|gb|ABX16398.1| extracellular solute-binding protein family 3 [Burkholderia multivorans ATCC 17616] gi|189333417|dbj|BAG42487.1| polar amino acid transport system substrate-binding protein [Burkholderia multivorans ATCC 17616] gi|221171036|gb|EEE03489.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia multivorans CGD2] gi|221177892|gb|EEE10305.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia multivorans CGD2M] Length = 297 Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust. Identities = 49/240 (20%), Positives = 96/240 (40%), Gaps = 11/240 (4%) Query: 11 CLIILFFTSFSTNAS-----ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 L++ +F++ A L IK G + G + F+ N G+ +F Sbjct: 7 VLMVAALCAFASGAQAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGYSREFQL 66 Query: 66 ALSSAI---FDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + A+ + P+ +++ +P+ ++ R +Q+ +DI +T R+ AF Sbjct: 67 KVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNAERQQQA--AFSNT 124 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + G + K G+ + L G ++ AGTT+E L M + I + + Sbjct: 125 IFVIGTRLMTKKDSGVKDFADLKGKTVVTTAGTTSERLLRKMNNDKQMGMNIISAKDHGD 184 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + R A+ D + L + +P E VI+ S+ + +GD E+ +V Sbjct: 185 SFNTLESGRAVAFMMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDPEFKKVV 244 >gi|118443622|ref|YP_878647.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Clostridium novyi NT] gi|118134078|gb|ABK61122.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Clostridium novyi NT] Length = 270 Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust. Identities = 62/249 (24%), Positives = 100/249 (40%), Gaps = 43/249 (17%) Query: 30 IKKRGFLKCGINTGL--VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 +K G L G++ G + F + K N GFD+D + + + K++++ Sbjct: 40 VKNSGKLLVGLDDGYPPMEFRDEKNN--LVGFDIDLAKEIGKKL---GVKVEFITTEFSG 94 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 L LQSK+ D + +T+ E L F GQ I+ KKG +S+ +LS Sbjct: 95 ILLGLQSKKFDTIIAG--FTMTDERKKSLNFTEPYVLGGQ--IIAVKKGNNSIKKLSDLK 150 Query: 148 ---ICVQAGTTTELTLADYFK--AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD--ISA 200 I Q G+ ++T K KY ++ E + R DA D + Sbjct: 151 EKVIGCQMGSAGQITAESKLKDIKELRKYG-----KITEAFSDMSIGRIDAVIMDAQVGG 205 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 Y K +P + +L +++SK P+ A GD + V QK Sbjct: 206 YYISK----KPGQFEVLDEMVSKEPMGIAFRMGDNALKDEV----------------QKI 245 Query: 261 INQVSKDTT 269 IN++ KD T Sbjct: 246 INELKKDGT 254 >gi|85058784|ref|YP_454486.1| glutamate and aspartate transporter subunit [Sodalis glossinidius str. 'morsitans'] gi|84779304|dbj|BAE74081.1| glutamate-aspartate ABC transporter periplasmic component GltI [Sodalis glossinidius str. 'morsitans'] Length = 298 Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust. Identities = 39/152 (25%), Positives = 63/152 (41%), Gaps = 6/152 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQYLP 82 L IK G + G + F+ G+ D+ A+ A+ D P+ +++YLP Sbjct: 29 LKKIKDNGVIVVGHRESSIPFSYYDNQQKVVGYSQDYSNAIVDAVKKKIDAPNLQVKYLP 88 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + + R LQ+ D +T L R+ + F + G + K I S Sbjct: 89 ITSSNRIPLLQNGTYDFECGSTTNNLERQKQVD--FSDTLFIIGTRLAVKKGALIKDFSD 146 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 L+G ++ V AGTT+E+ L MK I Sbjct: 147 LAGKTVVVTAGTTSEVLLNKLNDEKQMKMRII 178 >gi|328956328|ref|YP_004373661.1| amino acid ABC transporter substrate-binding protein, PAAT family [Coriobacterium glomerans PW2] gi|328456652|gb|AEB07846.1| amino acid ABC transporter substrate-binding protein, PAAT family [Coriobacterium glomerans PW2] Length = 282 Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust. Identities = 41/190 (21%), Positives = 80/190 (42%), Gaps = 12/190 (6%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFD---DPSK 77 + +S + IK RG LK G+ + G+ + A+G ++G ++D C +++++ + + +K Sbjct: 36 SGSSKIEAIKSRGKLKAGVKKDVPGYGYLDPASGKYEGMEIDLCYQVAASVLEVSYEEAK 95 Query: 78 ----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 +++ + K R + + +DI+ T R+ S F D G ++ K Sbjct: 96 QKDLVEFKDVTPKTRGPLIDNDNLDIICATYTITDTRKESYD--FSEPYRTDYVGMMVKK 153 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV--FERVEEIDAAYRAHRC 191 G+ + L G I V G+ T+ + P F + +A A Sbjct: 154 SSGMEDLDDLDGKVIGVSQGSDTKAAITKMLADQKADAKPTYQEFPDYPSLKSALDAGNV 213 Query: 192 DAYTGDISAL 201 D + D S L Sbjct: 214 DVFAMDRSTL 223 >gi|171316557|ref|ZP_02905773.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MEX-5] gi|171098285|gb|EDT43091.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MEX-5] Length = 266 Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust. Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 16/197 (8%) Query: 17 FTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 FT+ + +A +L +KK G L+ G+ F +G +GFDVD A++ + Sbjct: 19 FTAVAAHAEDLLDSVKKAGVLRVGLEGTYPPFNSRGTSGQLEGFDVDVANAVAGKLG--- 75 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK- 134 K Q++P LQ+ + D++ T R+ L + +P TY Q ++ +K Sbjct: 76 VKTQFIPTEWSGIIAGLQAGKFDVIVNQVTITPQRKEVLDFS-QPYTYSAAQ--LIQRKD 132 Query: 135 --KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 + S+ G + V GT + +A ++ +P E++ ++ A R + Sbjct: 133 DTRNFKSLEDFKGKKLGVTLGTNYD-QMARSVPGIEVQTYPGAPEKLRDLAAG----RIE 187 Query: 193 AYTGDISAL-YALKLTN 208 A D L Y +K +N Sbjct: 188 ATLDDRLMLPYMIKTSN 204 >gi|282896969|ref|ZP_06304973.1| extracellular solute-binding protein, family 3 [Raphidiopsis brookii D9] gi|281198142|gb|EFA73034.1| extracellular solute-binding protein, family 3 [Raphidiopsis brookii D9] Length = 274 Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust. Identities = 39/169 (23%), Positives = 76/169 (44%), Gaps = 22/169 (13%) Query: 5 FFVSILCLIILFF---------TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 F + L L IL F T ++ A+ + +I++RG++ + + A G+ Sbjct: 11 FSLGFLPLTILLFSWVVLPLPGTINTSLAATMQEIEERGYITIAVKDNIPPLAFRDKQGN 70 Query: 56 WKGFDVDFCRALSSAIF-DDPS-----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 +G ++D + L+ + D PS ++++ P+ ER + + ++D+ T Sbjct: 71 LQGLEIDLAKRLTRDLLGDSPSSRVKLQVKFQPVTNMERLPVVFNHRVDLAIARVTATPS 130 Query: 110 RE--ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT 156 R +SL + + Y+DG I+ K I S L+ ICV ++T Sbjct: 131 RSRIVSLSIPY----YYDGTA-IVTKNLTIQKPSDLNKRRICVLNYSST 174 >gi|167837860|ref|ZP_02464743.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia thailandensis MSMB43] Length = 297 Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust. Identities = 46/215 (21%), Positives = 86/215 (40%), Gaps = 11/215 (5%) Query: 12 LIILFFTSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 L++ ++F+ A L IK G + G + F+ + G+ DF Sbjct: 8 LVVAALSTFAGGAIAQETGTLKKIKDTGVIALGHRESSIPFSYYDQSQQVVGYSRDFQMK 67 Query: 67 LSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + A+ + +++ +P+ ++ R +Q+ +DI +T L R+ AF Sbjct: 68 VVDAVKKKLNLSNLQVRNIPVTSQNRIPLVQNGTVDIECGSTTNNLDRQKQA--AFSDTI 125 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 + G + K GI + L G ++ AGTT+E L + + M + I + E Sbjct: 126 FVIGTRLMTKKDSGIKDFADLKGKTVVTTAGTTSERLLREMNNKNQMGMNIISAKDHGES 185 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 R A+ D + L + +P E VI+ Sbjct: 186 FQTLETGRAVAFMMDDALLAGERAKAKQPGEWVIV 220 >gi|187927921|ref|YP_001898408.1| family 3 extracellular solute-binding protein [Ralstonia pickettii 12J] gi|187724811|gb|ACD25976.1| extracellular solute-binding protein family 3 [Ralstonia pickettii 12J] Length = 302 Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust. Identities = 51/233 (21%), Positives = 90/233 (38%), Gaps = 20/233 (8%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD---PS 76 +++ +L I+ G ++ V F+ A+ G+ VD C + + D P Sbjct: 26 LASSTPVLDRIRDTGTVRVAYRESSVPFSFYDADKKPVGYAVDLCLRVVDKLRTDLKRPD 85 Query: 77 -KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 K+QY+ + R A+ + D+ +T T RE +AF Y G I+ Sbjct: 86 LKVQYVLVTPSTRMPAIADGKADLECGST--TNNRERREKVAFTIPHYIAGIRMIVKTSS 143 Query: 136 GISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKY-----HPIVFERVEEIDAAYRA 188 GI L + EL + + NM + H F VE Sbjct: 144 GIRRWDDLRGKTVVTTKGTTSVAELRKMNDVRVLNMNFLEAKDHAESFAMVE-------T 196 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + DA+ D LY + P ++ ++ D+++ P A + + DTE+ +V Sbjct: 197 GKADAFAMDDVLLYGFRANTKTPGDYAVVGDMLTVEPYAIMLSKDDTEFKRLV 249 >gi|331702185|ref|YP_004399144.1| ABC transporter periplasmic subunit [Lactobacillus buchneri NRRL B-30929] gi|329129528|gb|AEB74081.1| ABC-type transporter, periplasmic subunit family 3 [Lactobacillus buchneri NRRL B-30929] Length = 276 Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust. Identities = 48/217 (22%), Positives = 94/217 (43%), Gaps = 16/217 (7%) Query: 25 SILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 ++L D K+ + G+ +T L G +V+ N KGF++D +A++ I K +++ Sbjct: 32 NVLKDDKQTKTITWGVKADTKLFGLMDVRDN-QIKGFEIDLAKAMTKQILGKDGKARFIQ 90 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD-GQGFIMHKKKGISSVS 141 + ++ R L++ ID + T R + + +YFD GQ ++ I +V Sbjct: 91 VTSQTRMPLLRNGNIDAIMATMTITPERAKQVDFSR---SYFDAGQAILVKNGSPIKNVK 147 Query: 142 QLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L+ GA + G+ + K K + + A ++ + DA T D Sbjct: 148 DLNHKGAIVLGVVGSNS----VQNIKKFAPKARVLQLSDYSQALTALKSGQGDALTTDNG 203 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 LY + + N P + ++ +K P A+ +G + Sbjct: 204 ILYGMSIEN--PG-YSVVGGTFTKEPYGIAVDKGQGQ 237 >gi|113866501|ref|YP_724990.1| ABC transporter periplasmic protein [Ralstonia eutropha H16] gi|113525277|emb|CAJ91622.1| ABC-type transporter, periplasmic component: PAAT family [Ralstonia eutropha H16] Length = 299 Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust. Identities = 46/218 (21%), Positives = 88/218 (40%), Gaps = 6/218 (2%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD---PS-KIQYLP 82 L IK G + G+ + F G+ D + AI D P+ +++ +P Sbjct: 30 LKKIKDTGVITLGVRESSIPFNYNLGGVRQVGYSYDINMKIVEAIKDQLKLPNLQVKEIP 89 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R LQ+ IDI +T L R+ +G F + G ++ K GI + Sbjct: 90 ITSQNRITLLQNGTIDIECGSTTNNLERQKQVG--FTNSIFIIGTRIMVKKDAGIKDWAD 147 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G ++ AGTT+E L + + I + + + R A+ D + LY Sbjct: 148 LKGKNVVTTAGTTSERLLRKMNDDQKLGVNIISTKDHGQSFLTLESGRAVAFMMDDALLY 207 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + P++ +++ S+ I + D ++ + Sbjct: 208 GERAKAKNPADWIVVGKPQSRESYGCMIRKDDPQFKKL 245 >gi|206901753|ref|YP_002250771.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Dictyoglomus thermophilum H-6-12] gi|206740856|gb|ACI19914.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Dictyoglomus thermophilum H-6-12] Length = 257 Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 16/174 (9%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 IKK G LK G + F ++ + GFD+D + ++ A+ K+Q + + Sbjct: 28 IKKAGVLKVGSDVAYAPFEFMEGDKPV-GFDIDIAQEIAKAL---GVKLQIINTSFDGII 83 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGAS 147 AL++K+ DI+ T R+ + + I Y+D I+ + K I+S L G Sbjct: 84 AALKAKKFDIIISAMTITEERKKEIDFS---IPYYDSGQIIVVRSDNKDINSEKDLKGKI 140 Query: 148 ICVQAGTTTELT---LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + VQ GTT ELT L D ++ + + E +++ R DA D+ Sbjct: 141 VGVQLGTTGELTAKKLKDQVGIKEIRSYETIPEAFMDLELG----RLDAVINDL 190 >gi|158425756|ref|YP_001527048.1| putative amino acid ABC transporter substrate binding protein [Azorhizobium caulinodans ORS 571] gi|158332645|dbj|BAF90130.1| putative amino acid ABC transporter substrate binding protein [Azorhizobium caulinodans ORS 571] Length = 304 Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust. Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 13/156 (8%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 L L + T+ A L DI K G +K + F V + G+D+D ++ Sbjct: 54 LGLAAVSLTALPARADALDDIMKAGVIKIAVPQDFPPFGSVGPDLKPVGYDIDMANLIAQ 113 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDI----LSRNTDWTLLREISLGLAFRPITYFD 125 + K + +P+ + R LQ+K++D+ L +N D + + S+ A +F+ Sbjct: 114 KLG---VKAELVPVTSANRIPYLQTKKVDLVISSLGKNPDREKVMDFSVAYA----PFFN 166 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 G F K ++ +L+G ++ V G ++ L+ Sbjct: 167 G-AFAPADVK-VTKPEELAGLTVGVTRGANEDIELS 200 >gi|309779619|ref|ZP_07674378.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Ralstonia sp. 5_7_47FAA] gi|308921560|gb|EFP67198.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Ralstonia sp. 5_7_47FAA] Length = 282 Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust. Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 12/166 (7%) Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GF+VD +AL + + +Q P N R LQ ++D+L + L E + LA Sbjct: 67 GFNVDLAQALGRGLGVEVETVQVQPSN---RVQFLQQGRVDVLVAAME--LNPERAELLA 121 Query: 118 FRPITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 P Y+ G ++ + + S L G +C+ G++ L A ++ P F Sbjct: 122 HVPTPYYRVGGVALVAQDSPVHQWSDLKGKDVCLSQGSSYAKPL-----AADIGATPKGF 176 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL-PDII 221 + E A R + C A D + L L +N ++ I+ PD+I Sbjct: 177 KSPAESLLALRGNNCAAAVHDATLLQPLPRSNPEWKDYRIVGPDLI 222 >gi|298290398|ref|YP_003692337.1| extracellular solute-binding protein family 3 [Starkeya novella DSM 506] gi|296926909|gb|ADH87718.1| extracellular solute-binding protein family 3 [Starkeya novella DSM 506] Length = 274 Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust. Identities = 39/180 (21%), Positives = 72/180 (40%), Gaps = 12/180 (6%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + +A L D+K +G L G+ + + G+ GF+VD + ++ + K + Sbjct: 20 AASADTLADVKAKGTLTIGVKNDYPPYGFLNDKGEIVGFEVDLGKYIAKELLGPEGKFEL 79 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +P+ A R L S +IDI+ T R + + ++ G I K S Sbjct: 80 VPVVAANRIEFLNSGRIDIILATLGVTEERGKVIDFSEYYVSA-PGPSVIAPKAATFSKW 138 Query: 141 SQLSGASICVQAGTTTELTLADYFKAH---NMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 +L G ++C G+ Y+ H ++ F+ E A + +RC + D Sbjct: 139 EELKGLTLCGIQGS--------YYNKHLSGDLGIQLTAFKTQPEAYRALKDNRCVGFVFD 190 >gi|282861575|ref|ZP_06270639.1| serine/threonine protein kinase with extracellular ligand sensor(s) [Streptomyces sp. ACTE] gi|282563391|gb|EFB68929.1| serine/threonine protein kinase with extracellular ligand sensor(s) [Streptomyces sp. ACTE] Length = 628 Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust. Identities = 36/163 (22%), Positives = 72/163 (44%), Gaps = 8/163 (4%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L+ G+ G + VK+ +KGF+VD +A++ + D ++Q++ +N+ R L++ Sbjct: 381 VLRIGVKRDQPGLS-VKSGDTYKGFEVDLAKAVARELGFDEGQVQFVSVNSGNRSDYLRT 439 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS---GASICVQ 151 + D++ + RE +AF Y +G ++ K + + +S L GA +C Sbjct: 440 GRADLVLATYSISDEREREEKVAFAGPYYQALKGLLVRKNRPYNDLSDLQRDPGAEVC-- 497 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 T + + K + ++ E+ A R D Y Sbjct: 498 --TARDSVYESWIKTEGLAGQQVLRSGFEDCVKALLDPRTDVY 538 >gi|195973406|gb|ACG63349.1| allantoate transport periplasmic binding protein [Klebsiella oxytoca M5al] Length = 261 Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust. Identities = 37/160 (23%), Positives = 68/160 (42%), Gaps = 9/160 (5%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K +++ L + A L DI+KRG ++ + V + +G+D+D Sbjct: 2 KKLLIALAGAACLLTNLSAAKADQLQDIEKRGTIRIAVPQDFPPLGSVGTDLQPQGYDID 61 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE--ISLGLAFRP 120 R L+ + K+Q +P+ + R LQ+ ++D++ + RE I A+ P Sbjct: 62 MARYLAKQM---KLKLQLVPVTSANRVPYLQTDKVDLVISSLGKNAEREKVIDFSRAYAP 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 +F G K + + LSG S+ V G ++ L Sbjct: 119 --FF--LGVFGPKGAELKDPAALSGKSVGVTRGAVEDMVL 154 >gi|325525013|gb|EGD02925.1| extracellular solute-binding protein [Burkholderia sp. TJI49] Length = 297 Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust. Identities = 49/240 (20%), Positives = 95/240 (39%), Gaps = 11/240 (4%) Query: 11 CLIILFFTSFSTNAS-----ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 L++ +F++ A L IK G + G + F+ N G+ +F Sbjct: 7 VLMVAALCAFASGAQAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGYSREFQM 66 Query: 66 ALSSAI---FDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + A+ + P+ +++ +P+ ++ R +Q+ +DI +T R+ AF Sbjct: 67 KVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNAERQQQA--AFSDT 124 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + G + K GI L G ++ AGTT+E L M + I + + Sbjct: 125 IFVIGTRLMTKKDSGIKDFGDLKGKTVVTTAGTTSERLLRKMNNEKQMGMNIISAKDHGD 184 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + R A+ D + L + +P E VI+ S+ + +GD ++ +V Sbjct: 185 SFNTLESGRAVAFMMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDADFKKVV 244 >gi|325526439|gb|EGD04023.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia sp. TJI49] Length = 301 Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust. Identities = 41/195 (21%), Positives = 77/195 (39%), Gaps = 6/195 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQYLP 82 L I++ + G V F+ V A+G GF D C + +A+ K ++++P Sbjct: 32 LEKIRQNNLISIGHRETSVPFSYVDASGKVIGFSQDLCDRVIAAVKARTGKPDLQVRFIP 91 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R +Q+ +D+ T R +AF + + + GI Sbjct: 92 VTSQNRIPLVQNGTVDLECGVTTNLAARHAQ--VAFSTTFFVATTRLLTRTQSGIRDFPD 149 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+G ++ GTT+E L + M I + E + R AY D L Sbjct: 150 LAGKTVVTNQGTTSERLLRKMNEDKKMNMQIISAKDYGEGRLTLESGRAAAYMMDDVLLA 209 Query: 203 ALKLTNDRPSEHVIL 217 ++ +P++ I+ Sbjct: 210 GVRQLAAKPADWQIV 224 >gi|221214829|ref|ZP_03587798.1| glutamate/aspartate periplasmic-binding protein [Burkholderia multivorans CGD1] gi|221165368|gb|EED97845.1| glutamate/aspartate periplasmic-binding protein [Burkholderia multivorans CGD1] Length = 301 Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust. Identities = 40/191 (20%), Positives = 75/191 (39%), Gaps = 6/191 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQYLP 82 L I++ + G V F+ V A+G GF D C + +A+ K ++++P Sbjct: 32 LEKIRQTNLISIGHRETSVPFSYVDASGKVIGFSQDLCDRVIAAVKARTGKPDLQVRFIP 91 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R +Q+ +D+ T R + AF + + + GI Sbjct: 92 VTSQNRIPLVQNGTVDLECGVTTNLAARHAQV--AFSTTFFVATTRLLTRTQSGIRDFPD 149 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+G ++ GTT+E L + M I + E + R AY D L Sbjct: 150 LAGKTVVTNQGTTSERLLRKMNEEKKMNMQIISAKDYGEGRLTLESGRAAAYMMDDVLLA 209 Query: 203 ALKLTNDRPSE 213 ++ +P++ Sbjct: 210 GVRQLAAKPAD 220 >gi|307130055|ref|YP_003882071.1| glutamate/aspartate ABC transporter periplasmic-binding protein [Dickeya dadantii 3937] gi|306527584|gb|ADM97514.1| periplasmic-binding component of an ABC superfamily glutamate/aspartate transporter [Dickeya dadantii 3937] Length = 307 Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust. Identities = 50/231 (21%), Positives = 91/231 (39%), Gaps = 6/231 (2%) Query: 27 LGDIKKRGFLKCGINTGLVGFA----EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 L +K G + G V F+ + K G + + A+ A+ +++ LP Sbjct: 39 LKKVKDSGVIVIGHRESSVPFSYYDNQQKVVGYSQAYSDKIVEAVKKAVGAPNLQVKLLP 98 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R LQ+ D+ +T L R+ AF + G + K GI + Sbjct: 99 ITSQNRIPLLQNGTFDLECGSTTNNLERQQQA--AFSNTIFVIGTRLLTKKDSGIKDFTD 156 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+G ++ V +GTT+E+ L + M I + + + R A+ D + L Sbjct: 157 LNGKAVVVTSGTTSEVLLNKMNEEKKMNLRIISAKDHGDSFRTLESGRAVAFMMDDALLA 216 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 + P E VI+ S + + D E+ +V T + T+ E Sbjct: 217 GERAKAKNPDEWVIVGTPQSHEAYGCMLRKNDPEFKKLVDDTIAQVQTSGE 267 >gi|295112703|emb|CBL31340.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Enterococcus sp. 7L76] Length = 190 Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust. Identities = 35/144 (24%), Positives = 68/144 (47%), Gaps = 4/144 (2%) Query: 19 SFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDW-KGFDVDFCRALSSAIFDDPS 76 S S+N ++ + +KK G +K G+ + F + + + +G + D R ++ I Sbjct: 34 SASSNKTVTVEQLKKAGKIKVGVKEDIPNFGYMNPDTNKNEGMEPDIARLIAKEITGSEE 93 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 ++++ + AK R L + ++D++ +T+ E F Y D GF++ K+ Sbjct: 94 NVEFVGVTAKTRGPLLDNGELDMVI--ATFTITDERKKTYNFTTPYYTDEIGFLVRKEDN 151 Query: 137 ISSVSQLSGASICVQAGTTTELTL 160 SS+ L G +I V TT+ L Sbjct: 152 FSSMKDLDGKTIGVAQSATTKENL 175 >gi|154249737|ref|YP_001410562.1| extracellular solute-binding protein [Fervidobacterium nodosum Rt17-B1] gi|154153673|gb|ABS60905.1| extracellular solute-binding protein family 3 [Fervidobacterium nodosum Rt17-B1] Length = 250 Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust. Identities = 44/174 (25%), Positives = 73/174 (41%), Gaps = 12/174 (6%) Query: 3 KDFFVSILC--LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 K FF ++ L++L TSF A L IK+RG L G F V GFD Sbjct: 2 KKFFTMVIAVLLVVLTVTSF---AQTLTQIKQRGKLIVGTEPTFPPFEFVDEKNQVVGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D L+ + K++ + L ALQ +ID+ T+ +E + + F Sbjct: 59 IDIAMELAKRL---GVKLEIVSLPFDSLIPALQQGKIDLAIAG--MTITKERAKVVDFSK 113 Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + Q ++ K + L G + VQ GTT +L ++D + +++ Sbjct: 114 PYFEANQAIVVRKDSKFEPKKLEDLVGQKVAVQLGTTGDLVVSDITGINVVRFQ 167 >gi|148543614|ref|YP_001270984.1| extracellular solute-binding protein [Lactobacillus reuteri DSM 20016] gi|184153022|ref|YP_001841363.1| amino acid ABC transporter substrate binding component [Lactobacillus reuteri JCM 1112] gi|227363423|ref|ZP_03847547.1| hypothetical protein HMPREF0535_0385 [Lactobacillus reuteri MM2-3] gi|325681968|ref|ZP_08161486.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri MM4-1A] gi|148530648|gb|ABQ82647.1| amino acid ABC transporter substrate-binding protein, PAAT family [Lactobacillus reuteri DSM 20016] gi|183224366|dbj|BAG24883.1| amino acid ABC transporter substrate binding component [Lactobacillus reuteri JCM 1112] gi|227071523|gb|EEI09822.1| hypothetical protein HMPREF0535_0385 [Lactobacillus reuteri MM2-3] gi|324978612|gb|EGC15561.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri MM4-1A] Length = 294 Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 58/134 (43%), Gaps = 5/134 (3%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 IKKRG L G++ V K NG G+DVD RA++ + + Q + + KE Sbjct: 43 IKKRGTLLIGVDDTFVPMDFRKKNGQLVGYDVDLSRAVAK-VLGLKADFQSIDWSMKE-- 99 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 L++ ID + T R+ +AF + GQ ++ K I + + G + Sbjct: 100 TELKNGTIDCIWNGYTATPSRQKR--IAFSRVYELSGQSLVVRKNSKIKNFKDMKGKVLG 157 Query: 150 VQAGTTTELTLADY 163 +Q +T + Y Sbjct: 158 IQESSTAQTDFDKY 171 >gi|268318929|ref|YP_003292585.1| ABC transporter solute-binding component [Lactobacillus johnsonii FI9785] gi|262397304|emb|CAX66318.1| ABC transporter solute-binding component [Lactobacillus johnsonii FI9785] Length = 249 Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust. Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 5/147 (3%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 IK RG L G++ V + NG GFDVD +A I P Q + + KE Sbjct: 20 IKSRGTLVIGVDDSFVPMDFRQKNGKLVGFDVDLAKAACKEIGLKPD-FQTIDWSMKE-- 76 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 L++ ID++ +T + + +AF + Q + K +GI++ Q+ G + Sbjct: 77 TELRNGTIDVIWNG--YTKTKARAKKVAFSKPYLENDQILVTRKNEGINNYRQMRGKILG 134 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVF 176 VQ G++ L +Y K + V Sbjct: 135 VQTGSSGADDLDNYPKVLKKRVKSTVL 161 >gi|251788514|ref|YP_003003235.1| extracellular solute-binding protein family 3 [Dickeya zeae Ech1591] gi|247537135|gb|ACT05756.1| extracellular solute-binding protein family 3 [Dickeya zeae Ech1591] Length = 240 Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust. Identities = 32/136 (23%), Positives = 61/136 (44%), Gaps = 9/136 (6%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 DI+KRG L+ + F V + +G+D+D L+ + K+Q +P+ + R Sbjct: 7 DIQKRGVLRVAVPQDFPPFGSVGTDLQPQGYDIDMAHYLADEM---KLKLQLVPVTSANR 63 Query: 89 FLALQSKQIDILSRNTDWTLLRE--ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 LQ+ ++D++ + RE I A+ P +F G K+ + + L G Sbjct: 64 VPYLQTDKVDLVISSLGKNAEREKVIDFSSAYAP--FF--LGVFGPKETDVGAPEALQGK 119 Query: 147 SICVQAGTTTELTLAD 162 ++ V G ++ L + Sbjct: 120 TVGVTRGAVEDMVLTE 135 >gi|107021746|ref|YP_620073.1| extracellular solute-binding protein [Burkholderia cenocepacia AU 1054] gi|116688692|ref|YP_834315.1| extracellular solute-binding protein [Burkholderia cenocepacia HI2424] gi|105891935|gb|ABF75100.1| L-aspartate-binding protein / L-glutamate-binding protein [Burkholderia cenocepacia AU 1054] gi|116646781|gb|ABK07422.1| L-aspartate-binding protein / L-glutamate-binding protein [Burkholderia cenocepacia HI2424] Length = 297 Score = 44.3 bits (103), Expect = 0.029, Method: Compositional matrix adjust. Identities = 45/227 (19%), Positives = 92/227 (40%), Gaps = 6/227 (2%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDP 75 +++ L IK G + G + F+ N G+ +F + A+ + P Sbjct: 20 AYAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGYSREFQLKIVDAVKKKLNLP 79 Query: 76 S-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 + +++ +P+ ++ R +Q+ +DI +T L R+ AF + G + K Sbjct: 80 NLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLERQQQA--AFSDTIFVIGTRLMTKKD 137 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 G+ + L G ++ AGTT+E L + + I + + + R A+ Sbjct: 138 SGVKDFADLKGKTVVTTAGTTSERLLRKMNNDKQLGMNIISAKDHGDSFNTLESGRAVAF 197 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 D + L + +P E VI+ S+ + +GD ++ +V Sbjct: 198 MMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDADFKKVV 244 >gi|307152145|ref|YP_003887529.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7822] gi|306982373|gb|ADN14254.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7822] Length = 261 Score = 44.3 bits (103), Expect = 0.029, Method: Compositional matrix adjust. Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 10/131 (7%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDV 61 + ++I + + F ST A+ L +I RG L G+ NT +GF G+ +GF++ Sbjct: 9 NLSLAIALMTLGLFPWASTRAASLEEIIHRGKLIVGVKDNTRPLGFK--NEQGNLQGFEI 66 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI-LSRNTDW-TLLREISLGLAFR 119 D + L+ + + P+N ER + +DI ++R TD + R + L + + Sbjct: 67 DVAQRLAQELLGSAEAVILRPVNNLERLQVVIDGTVDITIARVTDTSSRSRVVDLSIYY- 125 Query: 120 PITYFDGQGFI 130 Y DG G + Sbjct: 126 ---YLDGTGLV 133 >gi|312864872|ref|ZP_07725103.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus downei F0415] gi|311099999|gb|EFQ58212.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus downei F0415] Length = 282 Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust. Identities = 36/152 (23%), Positives = 72/152 (47%), Gaps = 7/152 (4%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F V+++ ++F+T K +K G + V + +G + GFDVD Sbjct: 15 FLVALVLASCSSRSNFATETDQWQTYSKEKTIKIGFDATFVPMGFEEKDGKYTGFDVD-- 72 Query: 65 RALSSAIFDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 L++A+F K+++ ++ + L++ ID++ +++ E LAF Sbjct: 73 --LANAVFKKYGIKVEWQAIDWDMKETELKNGTIDLIWNG--YSVTDERKKELAFTEPYM 128 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 + Q + K GISS++ ++G S+ QAG++ Sbjct: 129 VNQQVVVTKKSSGISSIAMMAGKSLGAQAGSS 160 >gi|288916725|ref|ZP_06411099.1| extracellular solute-binding protein family 3 [Frankia sp. EUN1f] gi|288351799|gb|EFC86002.1| extracellular solute-binding protein family 3 [Frankia sp. EUN1f] Length = 375 Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust. Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 15/152 (9%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDW-----KGFDVDFCRALSSAIFDD--PSK 77 SI+ DI ++G L I T A + +W +GFDVD A+++A+F + SK Sbjct: 93 SIMDDIWRKGDLTVAIVTD----APPAGSMNWTEPTLEGFDVDIAGAIATALFGNGGESK 148 Query: 78 IQYLPLNAKERFLALQSKQ--IDILSRNTDWTLLREISLGLAFRPITYFDGQ-GFIMHKK 134 I++ + K+R L++ +DI+ T R+ + F + YF+ + ++ K Sbjct: 149 IRFRAVTTKDRAALLKNPNSGVDIVVATYTITCERKEKENILFSGV-YFESRFALLVPAK 207 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKA 166 G ++ +G +IC G T+ L D ++ Sbjct: 208 AGFKTLRDFAGYTICSTEGATSVQKLEDAARS 239 >gi|115350618|ref|YP_772457.1| extracellular solute-binding protein [Burkholderia ambifaria AMMD] gi|115280606|gb|ABI86123.1| L-aspartate-binding protein / L-glutamate-binding protein [Burkholderia ambifaria AMMD] Length = 297 Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust. Identities = 48/240 (20%), Positives = 97/240 (40%), Gaps = 11/240 (4%) Query: 11 CLIILFFTSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 L++ +F++ A L IK G + G + F+ N G+ +F Sbjct: 7 VLMVAALCAFASGAHAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGYSREFQM 66 Query: 66 ALSSAI---FDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + A+ + P+ +++ +P+ ++ R +Q+ +DI +T R+ AF Sbjct: 67 KVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNTERQQQA--AFSDT 124 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + G + K G+ + L G ++ AGTT+E L + + I + + Sbjct: 125 IFVIGTRLMTKKDSGVKDFADLKGKTVVTTAGTTSERLLRKMNNDKQLGMNIISAKDHGD 184 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + R A+ D + L + +P E VI+ S+ + +GDT++ +V Sbjct: 185 SFNTLESGRAVAFMMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDTDFKKVV 244 >gi|290960317|ref|YP_003491499.1| extracellular transport-associated solute-binding protein [Streptomyces scabiei 87.22] gi|260649843|emb|CBG72959.1| putative extracellular transport-associated solute-binding protein [Streptomyces scabiei 87.22] Length = 350 Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust. Identities = 35/137 (25%), Positives = 61/137 (44%), Gaps = 8/137 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGD---WKGFDVDFCRALSSAIFD 73 S + + + IK GF+ G+ N+ G+ + A D +GFD+D R ++ I Sbjct: 83 SSDESGTTIQRIKDNGFITVGVDQNSYRWGYRDPNAKDDGAQLEGFDIDIVRRIAKEILG 142 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 DP K+ + + R AL+ ++D++ R T+ E +AF + GQ + K Sbjct: 143 DPDKVHFKAIPTSRRIPALRDGEVDMVVRT--MTISCERMDEVAFSQPYFRTGQQVLAPK 200 Query: 134 KKGISSVSQ-LSGASIC 149 I + L+ IC Sbjct: 201 SSTIKGYGKSLADKKIC 217 >gi|325062401|gb|ADY66091.1| polar amino acid uptake family ABC transporter, periplasmic substrate-binding protein [Agrobacterium sp. H13-3] Length = 277 Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust. Identities = 45/213 (21%), Positives = 82/213 (38%), Gaps = 7/213 (3%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 D+K R L G+ + + G+ GF+V+ + ++ + KI+++P+ A R Sbjct: 32 DVKARDKLIVGVKNDYPPYGYLNDKGEIIGFEVELAKYVAKELLGSSDKIEFVPVVAANR 91 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 L + +ID + T R+ + ++ G +M K+ S +L G + Sbjct: 92 IEFLTAGRIDAIFATLGVTPERDKVIDFTTAYVSS-PGPAVMMAKEATTSKWEELKGKPV 150 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 C G+ + + F + F+ E A R +RC + D L Sbjct: 151 CGIQGSYYNKKMTEEF-----GIQLVAFKTQPEAMRALRDNRCVGFVFDQMTLDLKVQEA 205 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 D V +P P+A I +GD + V Sbjct: 206 DWKGYKVAVP-TYEYLPMAGGIREGDKAFQEAV 237 >gi|229589723|ref|YP_002871842.1| putative ABC transporter exported solute-binding protein [Pseudomonas fluorescens SBW25] gi|229361589|emb|CAY48466.1| putative ABC transport system, exported solute-binding protein [Pseudomonas fluorescens SBW25] Length = 281 Score = 44.3 bits (103), Expect = 0.031, Method: Compositional matrix adjust. Identities = 45/197 (22%), Positives = 79/197 (40%), Gaps = 14/197 (7%) Query: 11 CLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALS 68 LI+L ++ + A + L I++R L G+ F + A +G +V+ + L Sbjct: 18 ALILLAASTTAAQADATLDKIEQRHVLVVGVLLSGGPFGGIDPATQKPRGLNVELAQELG 77 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 + +++Q +P+ R LQ ++D+L N +WT R LG P G Sbjct: 78 RQLG---AEVQLVPVLPANRVQFLQQGKVDLLIANMEWTPERGEILGFVPTPFYRVGGTA 134 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA-HNMKYHPIVFERVEEIDAAYR 187 ++ K I+ L G +C G++ Y K + F+ E A R Sbjct: 135 AVLKDSK-ITRWEDLKGQPVCTSQGSS-------YVKPLTELGVELKAFKSSSESLLALR 186 Query: 188 AHRCDAYTGDISALYAL 204 + C A D + + L Sbjct: 187 GNNCVAAVHDATLVNPL 203 >gi|300694154|ref|YP_003750127.1| substrate-binding periplasmic (pbp) ABC transporter protein [Ralstonia solanacearum PSI07] gi|299076191|emb|CBJ35504.1| putative substrate-binding periplasmic (PBP) ABC transporter protein [Ralstonia solanacearum PSI07] Length = 296 Score = 44.3 bits (103), Expect = 0.031, Method: Compositional matrix adjust. Identities = 48/219 (21%), Positives = 85/219 (38%), Gaps = 6/219 (2%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD---PS-KIQYLP 82 L IK G ++ V F+ + ANG G+ +D C L AI + P K+QYL Sbjct: 27 LDRIKATGTVRLAHRENSVPFSYLDANGKPIGYSMDLCMRLVDAIRESLKRPDLKVQYLQ 86 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + R A+ S + D+ +T+ RE +AF Y ++ GI + Sbjct: 87 VTPATRMDAIMSGRADLECASTNNA--RERREKVAFTIPHYIANGRMLVKTASGIRQLED 144 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G ++ G+ + +A + + E A + A+ D L Sbjct: 145 LRGKTVVSTRGSANGDLVRQLSEAGGLGITVVEASDHGESFAMVAEGKAQAFAMDDVLLA 204 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +K P+++ I+ P A + + D E+ ++ Sbjct: 205 GIKANAKNPADYAIVGKTQQVVPYAIMLSKNDPEFKKLI 243 >gi|256391355|ref|YP_003112919.1| extracellular solute-binding protein family 3 [Catenulispora acidiphila DSM 44928] gi|256357581|gb|ACU71078.1| extracellular solute-binding protein family 3 [Catenulispora acidiphila DSM 44928] Length = 355 Score = 44.3 bits (103), Expect = 0.031, Method: Compositional matrix adjust. Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 7/90 (7%) Query: 27 LGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 L I+KRGFL GI NT L G+ + + + + +GFDVD R ++ AIF IQ+ + Sbjct: 91 LDKIRKRGFLIAGIDLNTELFGY-DPQHDNNPQGFDVDMARQMARAIFGSDGHIQFRVVT 149 Query: 85 AKE----RFLALQSKQIDILSRNTDWTLLR 110 + + L + +D++ + T T R Sbjct: 150 LGDPKTGEYAQLHAGNVDLVVQTTTITCAR 179 >gi|310766983|gb|ADP11933.1| glutamate/aspartate ABC transporter, substrate-binding protein [Erwinia sp. Ejp617] Length = 309 Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust. Identities = 50/231 (21%), Positives = 91/231 (39%), Gaps = 6/231 (2%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQYLP 82 L I K G + G V F+ G+ D+ A+ +AI + P +++ LP Sbjct: 40 LEKIAKSGVIVVGHRESSVPFSYYDNQQKAVGYSQDYSDAIVAAIKKKLNKPDLQVKMLP 99 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R LQ+ D +T + R+ +F + G ++ K I + Sbjct: 100 VTSQNRIPLLQNGTYDFECGSTTNNIERQKQA--SFSNSIFVVGTRLLVKKGGAIKDFAD 157 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G ++ V +GTT+E+ L M + + + + R A+ D + L Sbjct: 158 LKGKTVVVTSGTTSEILLNKLNDEQKMGMRIVSAKDHGDSFRTLESGRAVAFMMDDALLA 217 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 + +PSE IL S + +GD E+ ++ T T+ E Sbjct: 218 GERAKAKKPSEWEILGTPQSHEAYGCMLRKGDNEFKKLMDDTIVQAQTSGE 268 >gi|167815972|ref|ZP_02447652.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 91] Length = 264 Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust. Identities = 41/174 (23%), Positives = 73/174 (41%), Gaps = 12/174 (6%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 +L ++K+RG L+ G+ F G+ GFDVD +A+++ + P +++ Sbjct: 29 LLDEVKQRGTLRIGLEGTFPPFNSKNPQGELVGFDVDIAKAIAAKLGVKP---EFVTTEW 85 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQL 143 LQ+ + D++ T R+ +L F P F I K + S+ L Sbjct: 86 SGIIAGLQAGKFDVIVNQVGITDPRKQTLD--FSPAYTFSSAQLIQRKDDARQFKSLEDL 143 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 G + V GT + +A ++K +P E + ++ A R DA D Sbjct: 144 KGKKLGVALGTNY-MDMAKSVPGIDVKTYPGAPEYLRDL----AAGRLDAALND 192 >gi|307729488|ref|YP_003906712.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1003] gi|307584023|gb|ADN57421.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1003] Length = 264 Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust. Identities = 44/191 (23%), Positives = 82/191 (42%), Gaps = 13/191 (6%) Query: 10 LCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 + LI FT+ + +A +L +K+RG L+ G+ F +G+ G+DVD +A++ Sbjct: 12 VALIGASFTAVAAHAEDLLDQVKQRGTLRVGLEGTFPPFNSKAPSGELVGYDVDIAKAVA 71 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 + + P +++ LQ+ + D++ T R+ +L F P + Sbjct: 72 ARLGVKP---EFITTEWSGIIAGLQAGKFDVIVNQVGITDARKQALD--FSPAYTYSAAQ 126 Query: 129 FIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 I K + S+ L G + V GT + +A ++K +P E + ++ A Sbjct: 127 LIQRKDDTRQFKSLDDLKGKKLGVGLGTNY-MDMAKSVPGIDVKTYPGAPEYLRDLAAG- 184 Query: 187 RAHRCDAYTGD 197 R DA D Sbjct: 185 ---RLDAALND 192 >gi|76809564|ref|YP_333374.1| amino acid ABC transporter periplasmic amino acid-binding protein [Burkholderia pseudomallei 1710b] gi|254179931|ref|ZP_04886530.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 1655] gi|254261060|ref|ZP_04952114.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 1710a] gi|254297763|ref|ZP_04965216.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 406e] gi|76579017|gb|ABA48492.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 1710b] gi|157806758|gb|EDO83928.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 406e] gi|184210471|gb|EDU07514.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 1655] gi|254219749|gb|EET09133.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 1710a] Length = 284 Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust. Identities = 41/174 (23%), Positives = 73/174 (41%), Gaps = 12/174 (6%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 +L ++K+RG L+ G+ F G+ GFDVD +A+++ + P +++ Sbjct: 49 LLDEVKQRGTLRIGLEGTFPPFNSKNPQGELVGFDVDIAKAIAAKLGVKP---EFVTTEW 105 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQL 143 LQ+ + D++ T R+ +L F P F I K + S+ L Sbjct: 106 SGIIAGLQAGKFDVIVNQVGITDPRKQTLD--FSPAYTFSSAQLIQRKDDARQFKSLEDL 163 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 G + V GT + +A ++K +P E + ++ A R DA D Sbjct: 164 KGKKLGVALGTNY-MDMAKSVPGIDVKTYPGAPEYLRDLAAG----RLDAALND 212 >gi|330884961|gb|EGH19110.1| amino-acid binding protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 40 Score = 43.9 bits (102), Expect = 0.033, Method: Composition-based stats. Identities = 18/36 (50%), Positives = 24/36 (66%) Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 + G+W GFDVD RA+S AIF D I+Y PL + + Sbjct: 5 SEGEWSGFDVDLARAVSVAIFGDDQCIEYFPLASND 40 >gi|229816477|ref|ZP_04446777.1| hypothetical protein COLINT_03530 [Collinsella intestinalis DSM 13280] gi|229807944|gb|EEP43746.1| hypothetical protein COLINT_03530 [Collinsella intestinalis DSM 13280] Length = 329 Score = 43.9 bits (102), Expect = 0.033, Method: Compositional matrix adjust. Identities = 42/177 (23%), Positives = 78/177 (44%), Gaps = 10/177 (5%) Query: 30 IKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 IK G ++ G+ + F+ + + +G +GFD + L I D SK + + + R Sbjct: 86 IKDAGTMRLGVVQTSMLFSLLNEKDGKLRGFDAGLSQLLVRYILGDESKFEATQVTSDTR 145 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG--FIMHKKKGISSVSQLSGA 146 LQ+ Q+D + T R+ + A Y+ Q ++ I+SV L+G Sbjct: 146 ESVLQNDQVDAVFATYSITEDRKKLISFAG---PYYGTQQSILVLADNDDIASVDDLAGK 202 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 ++ Q+G+T + + ++ F+ EE +A R DAY D + L++ Sbjct: 203 NVAAQSGSTGPSIMEEVCPDAKLQE----FKTDEEARSALAQGRVDAYVIDRNMLFS 255 >gi|330820140|ref|YP_004349002.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain protein [Burkholderia gladioli BSR3] gi|327372135|gb|AEA63490.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain protein [Burkholderia gladioli BSR3] Length = 269 Score = 43.9 bits (102), Expect = 0.033, Method: Compositional matrix adjust. Identities = 36/146 (24%), Positives = 65/146 (44%), Gaps = 9/146 (6%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 F + + A L I K G L+ + F V A+ +G+D+D L+ ++ Sbjct: 27 FGANAAQADALDTITKSGTLRVAVPEDYPPFGSVGADMQPQGYDIDTAALLAKSLG---V 83 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE--ISLGLAFRPITYFDGQGFIMHKK 134 K+Q +P+N+ R L + ++D++ + T RE I A+ P YF QG Sbjct: 84 KLQLVPVNSANRIPYLTTNKVDLVISSLGKTPDREKVIDFSAAYGP--YF--QGVFGPAD 139 Query: 135 KGISSVSQLSGASICVQAGTTTELTL 160 ++ + L+G ++ G E+ L Sbjct: 140 IKVAGPADLTGKTVGATRGALEEIAL 165 >gi|53719480|ref|YP_108466.1| putative ABC transporter cystine-binding protein [Burkholderia pseudomallei K96243] gi|53723464|ref|YP_102925.1| amino acid ABC transporter periplasmic amino acid-binding protein [Burkholderia mallei ATCC 23344] gi|67640271|ref|ZP_00439084.1| cystine ABC transporter, periplasmic cystine-binding protein [Burkholderia mallei GB8 horse 4] gi|121601368|ref|YP_993059.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia mallei SAVP1] gi|124385440|ref|YP_001026394.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia mallei NCTC 10229] gi|126439839|ref|YP_001058845.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 668] gi|126450875|ref|YP_001080333.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia mallei NCTC 10247] gi|126455413|ref|YP_001066091.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 1106a] gi|134282256|ref|ZP_01768961.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 305] gi|167003921|ref|ZP_02269700.1| cystine ABC transporter, periplasmic cystine-binding protein [Burkholderia mallei PRL-20] gi|167719753|ref|ZP_02402989.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei DM98] gi|167738748|ref|ZP_02411522.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 14] gi|167845887|ref|ZP_02471395.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei B7210] gi|167894457|ref|ZP_02481859.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 7894] gi|167902858|ref|ZP_02490063.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei NCTC 13177] gi|167911101|ref|ZP_02498192.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 112] gi|167919121|ref|ZP_02506212.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei BCC215] gi|217423617|ref|ZP_03455118.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 576] gi|226196423|ref|ZP_03792005.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei Pakistan 9] gi|237812103|ref|YP_002896554.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei MSHR346] gi|242315262|ref|ZP_04814278.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 1106b] gi|254177632|ref|ZP_04884287.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia mallei ATCC 10399] gi|254188664|ref|ZP_04895175.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei Pasteur 52237] gi|254197646|ref|ZP_04904068.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei S13] gi|254199867|ref|ZP_04906233.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia mallei FMH] gi|254206195|ref|ZP_04912547.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia mallei JHU] gi|254358593|ref|ZP_04974866.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia mallei 2002721280] gi|52209894|emb|CAH35866.1| putative ABC transport system, cystine-binding protein [Burkholderia pseudomallei K96243] gi|52426887|gb|AAU47480.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia mallei ATCC 23344] gi|121230178|gb|ABM52696.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia mallei SAVP1] gi|124293460|gb|ABN02729.1| cystine ABC transporter, periplasmic cystine-binding protein [Burkholderia mallei NCTC 10229] gi|126219332|gb|ABN82838.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 668] gi|126229055|gb|ABN92595.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 1106a] gi|126243745|gb|ABO06838.1| cystine ABC transporter, periplasmic cystine-binding protein [Burkholderia mallei NCTC 10247] gi|134246294|gb|EBA46383.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 305] gi|147749463|gb|EDK56537.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia mallei FMH] gi|147753638|gb|EDK60703.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia mallei JHU] gi|148027720|gb|EDK85741.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia mallei 2002721280] gi|157936343|gb|EDO92013.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei Pasteur 52237] gi|160698671|gb|EDP88641.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia mallei ATCC 10399] gi|169654387|gb|EDS87080.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei S13] gi|217393475|gb|EEC33496.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 576] gi|225931640|gb|EEH27645.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei Pakistan 9] gi|237502856|gb|ACQ95174.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei MSHR346] gi|238520963|gb|EEP84418.1| cystine ABC transporter, periplasmic cystine-binding protein [Burkholderia mallei GB8 horse 4] gi|242138501|gb|EES24903.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 1106b] gi|243060613|gb|EES42799.1| cystine ABC transporter, periplasmic cystine-binding protein [Burkholderia mallei PRL-20] Length = 264 Score = 43.9 bits (102), Expect = 0.033, Method: Compositional matrix adjust. Identities = 41/174 (23%), Positives = 73/174 (41%), Gaps = 12/174 (6%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 +L ++K+RG L+ G+ F G+ GFDVD +A+++ + P +++ Sbjct: 29 LLDEVKQRGTLRIGLEGTFPPFNSKNPQGELVGFDVDIAKAIAAKLGVKP---EFVTTEW 85 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQL 143 LQ+ + D++ T R+ +L F P F I K + S+ L Sbjct: 86 SGIIAGLQAGKFDVIVNQVGITDPRKQTLD--FSPAYTFSSAQLIQRKDDARQFKSLEDL 143 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 G + V GT + +A ++K +P E + ++ A R DA D Sbjct: 144 KGKKLGVALGTNY-MDMAKSVPGIDVKTYPGAPEYLRDL----AAGRLDAALND 192 >gi|146340753|ref|YP_001205801.1| cyclohexadienyl dehydratase [Bradyrhizobium sp. ORS278] gi|146193559|emb|CAL77576.1| Cyclohexadienyl dehydratase precursor [Includes: Prephenate dehydratase (EC 4.2.1.51); Arogenate dehydratase (EC 4.-.-.-)] [Bradyrhizobium sp. ORS278] Length = 273 Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust. Identities = 43/169 (25%), Positives = 76/169 (44%), Gaps = 15/169 (8%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 S L +I +RG L+ G+ F + KA G + GFDVD AL A+ K++++P Sbjct: 40 SRLDEIMQRGALRVGMTGDYKPFTYLDKATGKFSGFDVDMAEALGKAM---GVKVEFVPT 96 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-----KKKGIS 138 + + ++ + D+ TL R+ G PI +G+ I K + ++ Sbjct: 97 SWPQLMKDFEADKFDVAMGGVSITLDRQ-KKGFFSTPIMR-EGKTPIARCSDTGKYQTLA 154 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP---IVFERVEEIDA 184 + + G + V G T E KA +++ HP +F+ + + DA Sbjct: 155 DIDR-PGTRVVVNPGGTNERFARANIKAADIRVHPDNVTIFDEIAKGDA 202 >gi|251790533|ref|YP_003005254.1| extracellular solute-binding protein family 3 [Dickeya zeae Ech1591] gi|247539154|gb|ACT07775.1| extracellular solute-binding protein family 3 [Dickeya zeae Ech1591] Length = 297 Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust. Identities = 47/231 (20%), Positives = 93/231 (40%), Gaps = 6/231 (2%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQYLP 82 L +K G + G V F+ G+ + + A+ D P+ +++ +P Sbjct: 29 LKKVKDNGVIVIGHRESSVPFSYYDNQQKVVGYSQAYSDKIVEAVRKKLDAPNLQVKLIP 88 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R LQ+ D+ +T L R+ + AF + G + K G+ S+ Sbjct: 89 ITSQNRIPLLQNGTYDLECGSTTNNLERQQQV--AFSDTIFIIGTRLLTKKDSGLKDFSE 146 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+G ++ V +GTT+E+ L + + I + + + R A+ D + L Sbjct: 147 LTGKAVVVTSGTTSEVLLNKMNEEKKLNLRIISAKDHGDSFRTLESGRAVAFMMDDALLA 206 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 + P E VI S+ + + D ++ +V T + T+ E Sbjct: 207 GERAKAKTPDEWVITGTPQSREAYGCMLRKDDPQFKQLVDATISQLQTSGE 257 >gi|297202815|ref|ZP_06920212.1| glutamate binding protein [Streptomyces sviceus ATCC 29083] gi|297148212|gb|EFH28894.1| glutamate binding protein [Streptomyces sviceus ATCC 29083] Length = 281 Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust. Identities = 45/207 (21%), Positives = 83/207 (40%), Gaps = 9/207 (4%) Query: 46 GFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105 G + +G + GFDVD ++ + P +I+++ + +R AL + I++ Sbjct: 52 GLGLKEPDGSFSGFDVDVATYVAKQLGYKPDQIEFVETKSADRENALARGDVKIIAAT-- 109 Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF- 164 +++ E + F Q ++ K IS + L+G +C G+T+ + D F Sbjct: 110 YSINDERKKKVDFAGPYLLAHQDLLVKKDSKISQATDLNGEKLCSVTGSTSAQNVHDDFA 169 Query: 165 -KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 KA +Y E A ++ DA T D S L + + + +S Sbjct: 170 PKAQLKQYGGY-----SECIAGLQSGAVDAVTTDDSILAGFAAQDKYKGQFKLAGLKLSN 224 Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAMVT 250 + +GDT N V+ MV+ Sbjct: 225 ENYGIGVKKGDTATLNKVNAALEKMVS 251 >gi|187923719|ref|YP_001895361.1| extracellular solute-binding protein family 3 [Burkholderia phytofirmans PsJN] gi|187714913|gb|ACD16137.1| extracellular solute-binding protein family 3 [Burkholderia phytofirmans PsJN] Length = 264 Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust. Identities = 44/192 (22%), Positives = 82/192 (42%), Gaps = 13/192 (6%) Query: 9 ILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 + LI FT+ + +A +L +K+RG L+ G+ F +G+ G+DVD +A+ Sbjct: 11 VAGLIGASFTAVAAHADDLLDQVKQRGTLRIGLEGTFPPFNSKAPSGELVGYDVDIAKAV 70 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 ++ + P +++ LQ+ + D++ T R+ +L F P + Sbjct: 71 AAKLGVKP---EFVTTEWSGIIAGLQANKFDVIVNQVGITDARKQALD--FSPAYTYSAA 125 Query: 128 GFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 I K + S+ L G + V GT + +A ++K +P E + ++ Sbjct: 126 QLIQRKDDTRQFKSLDDLKGKKLGVGLGTNY-MDMAKSVPGIDVKTYPGAPEYLRDL--- 181 Query: 186 YRAHRCDAYTGD 197 A R DA D Sbjct: 182 -AAGRLDAALND 192 >gi|94309287|ref|YP_582497.1| extracellular solute-binding protein [Cupriavidus metallidurans CH34] gi|93353139|gb|ABF07228.1| glutamate and aspartate transporter subunit ; periplasmic-binding component of ABC superfamily [Cupriavidus metallidurans CH34] Length = 302 Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust. Identities = 43/198 (21%), Positives = 84/198 (42%), Gaps = 12/198 (6%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS----KIQYLP 82 L IK G + G T + F+ AN GF D C + A+ + +++ +P Sbjct: 33 LSKIKSSGTISIGHRTSSIPFSYYDANQKVIGFSQDICDRVIDAVKKETGTPNLQVRMVP 92 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R +Q+ +D+ T T L+ +AF + G ++ K + Sbjct: 93 VTSQNRQSLVQNGTVDLECGVT--TNLKSRQQQVAFSTTFFVAGTRLLVKKGSPVHDFGD 150 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY---RAHRCDAYTGDIS 199 LSG ++ AGTT+E L K ++ K I + ++ ++ ++ R A+ D Sbjct: 151 LSGKAVVTNAGTTSERILR---KLNDEKGANITIQSAKDYGESFLILQSGRVAAFMMDDV 207 Query: 200 ALYALKLTNDRPSEHVIL 217 L + P++ V++ Sbjct: 208 LLSGSRTLAPNPNDWVVV 225 >gi|299068311|emb|CBJ39535.1| Amino-acid ABC transporter binding protein ybeJ [Ralstonia solanacearum CMR15] Length = 288 Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust. Identities = 45/232 (19%), Positives = 92/232 (39%), Gaps = 7/232 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQYLP 82 L I+ G ++ V F+ + G G+ +D C + AI P K+QYLP Sbjct: 20 LDRIRDTGTIRLAYREDSVPFSYMDG-GKPIGYSIDICSRVVDAIRTSLKRPDLKVQYLP 78 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + A R + S + D+ +T+ R + AF Y ++ G+ Sbjct: 79 VTAVNRMDTIASGKADLECGSTNNAPERREKV--AFTIPHYITKGRMLVKASSGLQQWED 136 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G ++ G++ + A + + ++ + + DA+ GD L Sbjct: 137 LHGKTVVAARGSSASDVMHKLNDATGLGMRAVDTNDLKTAFSMLSTGKADAFAGDDVLLA 196 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 ++ T+D P+++V+ S A + + D ++ +V + ++ E+ Sbjct: 197 GMRATSDNPTDYVVAGKTQLVSSYAMMMSKQDADFKKLVDQSMTRLIVDGEV 248 >gi|311895159|dbj|BAJ27567.1| putative glutamate ABC transporter substrate-binding protein [Kitasatospora setae KM-6054] Length = 303 Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust. Identities = 52/219 (23%), Positives = 89/219 (40%), Gaps = 16/219 (7%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 T + L + RG L G + A G++ GFD++ R + + + P +I++ Sbjct: 52 TGSPTLDAARARGHLVVGAKEDQPYLGQKNPATGEYSGFDIEIARMVGADLGFAPERIEF 111 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF-DGQGFIMHKKK-GIS 138 + + R ALQ+ Q+D R+ +G A YF GQ ++ K + I Sbjct: 112 RTIASANRETALQNGQVDYYVGTYTINDNRKKLVGFAG---PYFVAGQSLLVRKNETKID 168 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 L+G +C AG+T + + + + V+ + + DA T D Sbjct: 169 GPQDLAGRKVCSAAGSTPYQRIQKNYPQAKLIGYDTYSACVDNLITG----QVDAVTTDN 224 Query: 199 SAL--YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + L YA K+ P E I S+ P + +GDT Sbjct: 225 AILQGYAAKV----PDELRIAGQPFSEEPYGIGVPKGDT 259 >gi|317472160|ref|ZP_07931492.1| extracellular solute-binding protein, family 3 [Anaerostipes sp. 3_2_56FAA] gi|316900564|gb|EFV22546.1| extracellular solute-binding protein, family 3 [Anaerostipes sp. 3_2_56FAA] Length = 265 Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust. Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 5/121 (4%) Query: 38 CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97 G N F V N GFD+ + ++ + KI+ + K +++SK I Sbjct: 36 VGTNAEFPPFEYVDDNKKVDGFDIALMKEIAKRM---DKKIEIQNMEFKSLIGSMESKTI 92 Query: 98 DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157 ++++ T R+ ++ F Y Q I++K I+ +SQL G I VQ GTT + Sbjct: 93 NVVAAGMTKTEERQNAVD--FSDSYYTSNQAIIVNKDSKITKLSQLDGKKIGVQEGTTGD 150 Query: 158 L 158 L Sbjct: 151 L 151 >gi|167837541|ref|ZP_02464424.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia thailandensis MSMB43] Length = 266 Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust. Identities = 43/186 (23%), Positives = 80/186 (43%), Gaps = 9/186 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 +K F S L +L + S +A+ +L ++++ G LK + F +G +GFD Sbjct: 4 FKPMFTSTLVAALLGIATASAHAADLLDNVRQAGVLKIALEGTYPPFDYRNGDGQLEGFD 63 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + +++ + P Q++ LQ+ + D++ T R+ +L + +P Sbjct: 64 VDVAKEVAARLGVKP---QFVTTEWSGILAGLQAGKFDVIVNQVGITPARKQALDFS-QP 119 Query: 121 ITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y Q I K + L G I V GT LA + ++K +P E+ Sbjct: 120 YVYSAAQ-LIQRADDKHDYGAPGALQGKRIGVTLGTNFA-DLAKTLQGVDVKTYPGAPEK 177 Query: 179 VEEIDA 184 + ++ A Sbjct: 178 LRDVAA 183 >gi|296274226|ref|YP_003656857.1| family 3 extracellular solute-binding protein [Arcobacter nitrofigilis DSM 7299] gi|296098400|gb|ADG94350.1| extracellular solute-binding protein family 3 [Arcobacter nitrofigilis DSM 7299] Length = 271 Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust. Identities = 56/243 (23%), Positives = 104/243 (42%), Gaps = 24/243 (9%) Query: 10 LCLIILFFTSFSTNAS--------ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + L IL F + + AS L + +RG L+ + G + F G G+DV Sbjct: 4 MLLAILVFATVNLVASDINLWKNSTLNKVLERGELQVCLEPGYMPFEMKDKKGRIIGYDV 63 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D + ++ + K++ LP AL + + DI+ T+ ++ +L + F Sbjct: 64 DVAQLMAKEM---GVKLKLLPTAWDGIIAALVTGKCDIIISGM--TVTQQRNLKVNFADP 118 Query: 122 TYFDGQGFIMHK--KKGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 GQ +M+K + I S +L +I + GT+ E+ + ++K K + FE Sbjct: 119 YLVVGQTVLMNKSLEGKIKSAKELDNPKYTIVTKLGTSAEIAIRKFYK----KAKIVTFE 174 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI-ISKSPLAPAIIQGDTE 236 + + + DA+ D Y + D+ ++ D ++ PLA AI +GD + Sbjct: 175 TEADAVSEVLNNNADAFVYDQP--YNILFMADKGKGKLVHLDTPLTFEPLAWAIRKGDPD 232 Query: 237 WYN 239 + N Sbjct: 233 FLN 235 >gi|171059369|ref|YP_001791718.1| extracellular solute-binding protein [Leptothrix cholodnii SP-6] gi|170776814|gb|ACB34953.1| extracellular solute-binding protein family 3 [Leptothrix cholodnii SP-6] Length = 300 Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust. Identities = 54/262 (20%), Positives = 104/262 (39%), Gaps = 15/262 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ L L F T + L I+ G G+ A +G + GF Sbjct: 1 MKKTLMMAAL-LACAFVTGQARAEDTLKKIRDTGSATLGVRESSGALAYTLGDGKYVGFH 59 Query: 61 VDFCRALSSAIFDDPSK--------IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 + ++ I D K I+Y + ++ R +Q+ +D+ +T R+ Sbjct: 60 TE----MAERILGDIRKQLGLPKLDIKYQVVTSQNRIPLVQNGTVDLECGSTTNNAARQK 115 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + AF TY + GI+ + QLSG ++ GTT+ TL + +A+ + + Sbjct: 116 DV--AFAVTTYVEEVRIATKVNSGITGIGQLSGRAVATTTGTTSVQTLRRHERANGVDFK 173 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + + + R DA+ D L P ++ ++ +++S P+A + + Sbjct: 174 EVYGKDHADSFLLLETGRADAFVMDGQILAGNISRAKNPPDYRLVGEVLSVEPIACVLRR 233 Query: 233 GDTEWYNIVSWTHYAMVTAEEL 254 D + V + M+ + EL Sbjct: 234 DDPVFKKAVDDSIVGMIRSGEL 255 >gi|158316704|ref|YP_001509212.1| extracellular solute-binding protein [Frankia sp. EAN1pec] gi|158112109|gb|ABW14306.1| extracellular solute-binding protein family 3 [Frankia sp. EAN1pec] Length = 341 Score = 43.9 bits (102), Expect = 0.037, Method: Compositional matrix adjust. Identities = 28/137 (20%), Positives = 58/137 (42%), Gaps = 7/137 (5%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYL 81 + L I RG+L G+ F + G+++GFDVD + A+F +++ Sbjct: 96 DGPTLRKIADRGYLTVGVRPDTPPFGSRNPDTGEFEGFDVDLALLVGRALFGADGHVRFR 155 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLR--EISLGLAFRPITYFDGQGFIMHKKKGISS 139 + +R ++ +D+++ T R E+ + Y + ++ + Sbjct: 156 AVTGADRVALVRDGTLDLVAATLTITCDRADEVDFSAPY----YLTAKAVLVLEDAPYQG 211 Query: 140 VSQLSGASICVQAGTTT 156 ++ L G +C AGTT+ Sbjct: 212 LADLGGRRVCAAAGTTS 228 >gi|329295743|ref|ZP_08253079.1| extracellular solute-binding protein family 3 [Plautia stali symbiont] Length = 42 Score = 43.9 bits (102), Expect = 0.037, Method: Composition-based stats. Identities = 19/26 (73%), Positives = 22/26 (84%) Query: 79 QYLPLNAKERFLALQSKQIDILSRNT 104 +Y PL AKERF ALQS ++DILSRNT Sbjct: 16 KYTPLTAKERFTALQSGEVDILSRNT 41 >gi|296162982|ref|ZP_06845759.1| extracellular solute-binding protein family 3 [Burkholderia sp. Ch1-1] gi|295886776|gb|EFG66617.1| extracellular solute-binding protein family 3 [Burkholderia sp. Ch1-1] Length = 297 Score = 43.9 bits (102), Expect = 0.038, Method: Compositional matrix adjust. Identities = 47/227 (20%), Positives = 93/227 (40%), Gaps = 6/227 (2%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDP 75 + + +A L IK G + G + F+ + G+ +F + A+ + P Sbjct: 20 AHAQDAGTLKKIKDTGVISLGHRESSIPFSYYDDKQNVIGYSQEFALKVVDAVKQKLNMP 79 Query: 76 S-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 + K++ P+ ++ R +Q+ +D+ +T R+ + AF + G + K Sbjct: 80 NLKVKLTPVTSQNRIPLVQNGTVDMECGSTTNNAERQQQV--AFSNTIFVIGTRLMTKKD 137 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 GI + L G ++ AGTT+E L + +M + I + E R A+ Sbjct: 138 SGIKDWADLKGKTVVTTAGTTSERLLRKMNQDKSMGMNIISAKDHGESFLTLSTGRAAAF 197 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 D + L + ++ P++ VI+ S I + D E+ +V Sbjct: 198 MMDDALLAGERAKSNNPADFVIVGAPQSHEAYGCMIRKNDPEFKKVV 244 >gi|187920635|ref|YP_001889667.1| family 3 extracellular solute-binding protein [Burkholderia phytofirmans PsJN] gi|187719073|gb|ACD20296.1| extracellular solute-binding protein family 3 [Burkholderia phytofirmans PsJN] Length = 291 Score = 43.9 bits (102), Expect = 0.038, Method: Compositional matrix adjust. Identities = 43/197 (21%), Positives = 74/197 (37%), Gaps = 6/197 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQY 80 S L I+ + G V F+ V N GF D C + A+ +++ Sbjct: 20 STLAKIRSGNSISIGHRETSVPFSYVDTNNQVIGFSQDICNRIIDAVKAKTGHPDLHVRF 79 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +P+ ++ R +Q+ +D+ T T L +AF + + K GI Sbjct: 80 IPVTSQNRIPLVQNGTVDLECGVT--TNLTSRQNQVAFSDTFFVATTRLLTRKDSGIKDF 137 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + L+G ++ GTT+E L + M I + E R AY D Sbjct: 138 TDLAGKTVVTNQGTTSERLLRKMNEEKKMNMQIISAKDYGEGRVTLETGRAVAYMMDDVL 197 Query: 201 LYALKLTNDRPSEHVIL 217 L + +P++ VI+ Sbjct: 198 LAGARSLTAKPADWVIV 214 >gi|306825320|ref|ZP_07458662.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432756|gb|EFM35730.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 279 Score = 43.9 bits (102), Expect = 0.039, Method: Compositional matrix adjust. Identities = 40/162 (24%), Positives = 72/162 (44%), Gaps = 16/162 (9%) Query: 9 ILCLIILFFTSFST---------NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 I + LFF+ F T N +K+G + G + V + NG + GF Sbjct: 6 IALALALFFSFFLTACTQKASDPNQDNWAKYQKQGSITIGFDNTFVPMGFEEKNGQYAGF 65 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D +A+S + +I++ P++ + LQ+ ID + +T E +AF Sbjct: 66 DIDLAQAVSEKL---GIQIKFQPIDWDMKETELQNGTIDAIWNG--YTATDERKEKVAF- 119 Query: 120 PITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTL 160 I Y + Q ++ KK + I S+ ++ + QAG++ L Sbjct: 120 TIPYMENQQVLVSKKSQNIHSIQDMTDKILGAQAGSSGYLNF 161 >gi|163856809|ref|YP_001631107.1| periplasmic glutamine-binding protein [Bordetella petrii DSM 12804] gi|163260537|emb|CAP42839.1| periplasmic glutamine-binding protein [Bordetella petrii] Length = 247 Score = 43.9 bits (102), Expect = 0.040, Method: Compositional matrix adjust. Identities = 45/185 (24%), Positives = 79/185 (42%), Gaps = 14/185 (7%) Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 NG GFD++ AL A+ KI+++ ++ K ALQ+ + D+ T R+ Sbjct: 45 NGQRTGFDIELIEALGQAMG---KKIEWIDIDFKGLIPALQAGRADMAVSAIYITDARKQ 101 Query: 113 SLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 + Y+ G ++ +K G I S+ L G + VQ GT + +Y K H + Sbjct: 102 VVDFTD---PYYAGGLVVLTRKDGPIKSLKDLDGRKVSVQVGTKS----VNYLKEHYPQV 154 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + E+ +E+ + R DA ++ A KL E +L + I+ A+ Sbjct: 155 QRVEVEKNQEMFNLVQVGRTDAA---VTGKPAAKLFAQNTPELTVLDEQITTEQYGIAVP 211 Query: 232 QGDTE 236 + E Sbjct: 212 KSKPE 216 >gi|218440339|ref|YP_002378668.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7424] gi|218173067|gb|ACK71800.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7424] Length = 276 Score = 43.9 bits (102), Expect = 0.040, Method: Compositional matrix adjust. Identities = 26/109 (23%), Positives = 49/109 (44%), Gaps = 5/109 (4%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 FF+S++CL ++ ++L I++ G L G + F G+W G+ V+ Sbjct: 9 FFLSLICLTNYSLKVYA--ETVLEKIQRTGELNAGARIDAIPFGYKTDKGEWTGYSVELL 66 Query: 65 RALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 R + + + P K+ + RF ++ +Q+DI+ T T R Sbjct: 67 RLIHQDLEKKLNKPIKLNLKEVTIDNRFQTVEKQQVDIVCGATTITQQR 115 >gi|170744198|ref|YP_001772853.1| extracellular solute-binding protein [Methylobacterium sp. 4-46] gi|168198472|gb|ACA20419.1| extracellular solute-binding protein family 3 [Methylobacterium sp. 4-46] Length = 298 Score = 43.9 bits (102), Expect = 0.040, Method: Compositional matrix adjust. Identities = 50/237 (21%), Positives = 92/237 (38%), Gaps = 9/237 (3%) Query: 6 FVSILCLIILFF--TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 F + C ++L F T S + L IK G + G + F+ + + GF +D Sbjct: 7 FRRVSCALVLSFATTVASAESPTLTKIKSNGSVTLGYREASIPFSYLGTDQKPVGFSLDL 66 Query: 64 CRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 C + + I D ++ P+++ R +Q+ ID+ T ++ R +AF Sbjct: 67 CAQVVAKIKSDLKLDTLAVKLQPVDSTNRIPLIQNGTIDMECGATSSSVARLKQ--VAFT 124 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + ++ GI V L G ++ G+ + A KA ++ I + Sbjct: 125 VAIFVSSARWLTKVSSGIHDVKDLDGKTVVATQGSNA-VGFAFGIKAKGGTFNVIQAKDH 183 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E ++ R A+ D L +LK P+ LP+ + P + + D E Sbjct: 184 GESMLTLQSGRAAAFMEDDILLASLKARTPDPAAFAFLPETYTLVPYGLMLPRDDVE 240 >gi|256787709|ref|ZP_05526140.1| sugar-binding protein [Streptomyces lividans TK24] Length = 334 Score = 43.9 bits (102), Expect = 0.040, Method: Compositional matrix adjust. Identities = 30/118 (25%), Positives = 55/118 (46%), Gaps = 5/118 (4%) Query: 46 GFAEVKANGD--WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103 G+ + + GD +GFD+D ++ + D +Q+ + +R A+Q ++D++ R Sbjct: 94 GYRDPNSGGDAELEGFDIDLAHRIAKDVLGDEDAVQFKAIPTDQRVPAIQDGRVDMVVRT 153 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS-QLSGASICVQAGTTTELTL 160 T+ + +AF + GQ + K I+ L+G IC AG+T TL Sbjct: 154 M--TINCDRLEDVAFSAPYFRTGQQVLAPKSSKITGYDGTLAGKEICTAAGSTALSTL 209 >gi|254252492|ref|ZP_04945810.1| ABC-type amino acid transport/signal transduction systems periplasmic component [Burkholderia dolosa AUO158] gi|124895101|gb|EAY68981.1| ABC-type amino acid transport/signal transduction systems periplasmic component [Burkholderia dolosa AUO158] Length = 264 Score = 43.5 bits (101), Expect = 0.041, Method: Compositional matrix adjust. Identities = 41/174 (23%), Positives = 73/174 (41%), Gaps = 12/174 (6%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 +L +K+RG L+ G+ F GD GFDVD +A+++ + +P +++ Sbjct: 29 LLDQVKQRGTLRIGLEGTFPPFNSKSPQGDLVGFDVDIAKAVAAKLGVNP---EFVTTEW 85 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQL 143 LQ+ + D++ T R+ +L F P + I K + S+ L Sbjct: 86 SGIIAGLQAGKFDVIVNQVGITDKRKETLD--FSPAYTYSSAQLIQRKDDTREFKSLEDL 143 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 G + V GT + +A ++K +P E + ++ A R DA D Sbjct: 144 KGKKLGVALGTNY-MDMAKSVPGIDVKTYPGAPEYLRDL----AAGRLDAALND 192 >gi|197284337|ref|YP_002150209.1| glutamate and aspartate transporter subunit [Proteus mirabilis HI4320] gi|227358519|ref|ZP_03842844.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, substrate-binding protein [Proteus mirabilis ATCC 29906] gi|194681824|emb|CAR41086.1| glutamate/aspartate ABC transporter, substrate-binding protein [Proteus mirabilis HI4320] gi|227161230|gb|EEI46304.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, substrate-binding protein [Proteus mirabilis ATCC 29906] Length = 297 Score = 43.5 bits (101), Expect = 0.041, Method: Compositional matrix adjust. Identities = 42/210 (20%), Positives = 88/210 (41%), Gaps = 9/210 (4%) Query: 58 GFDVDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ D+ + A+ + K ++ +P+ ++ R LQ+ D +T L R+ Sbjct: 59 GYSQDYSNLIVEAVKEKLGKPNLQVRLIPITSQNRIPLLQNGTFDFECGSTTNNLARQQQ 118 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 F + G + K GI + L+G ++ V +GTT+E+ L M Sbjct: 119 AD--FSNTIFIVGTRLLAKKDSGIKDFADLAGKNVVVTSGTTSEMLLNKLNDEKKMNMRI 176 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + + + R A+ D + L + +P+ I+ S+ + +G Sbjct: 177 ISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPALWEIVGTPQSEEAYGCMLRKG 236 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 DT++ +++ T + A++ G +K+ N+ Sbjct: 237 DTQFKSLIDET---IANAQKSGAAEKSFNR 263 >gi|188591216|ref|YP_001795816.1| glutamate/aspartate transporter; ABC superfamily, periplasmic binding component [Cupriavidus taiwanensis LMG 19424] gi|170938110|emb|CAP63096.1| glutamate/aspartate transport protein; ABC superfamily, periplasmic binding component [Cupriavidus taiwanensis LMG 19424] Length = 299 Score = 43.5 bits (101), Expect = 0.041, Method: Compositional matrix adjust. Identities = 43/195 (22%), Positives = 80/195 (41%), Gaps = 6/195 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD---PS-KIQYLP 82 L IK G + G+ + F G+ D + AI D P+ +++ +P Sbjct: 30 LKKIKDTGVITLGVRESSIPFNYNLGGVRQVGYSYDINMKIVEAIKDQLKLPNLQVKEIP 89 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R LQ+ IDI +T L R+ + AF + G ++ K GI + Sbjct: 90 ITSQNRITLLQNGTIDIECGSTTNNLERQKQV--AFTNSIFIIGTRIMVKKDAGIKDWAD 147 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G ++ AGTT+E L + + I + + + R A+ D + LY Sbjct: 148 LKGKNVVTTAGTTSERLLRKMNDDQKLGMNIISTKDHGQSFLTLESGRAVAFMMDDALLY 207 Query: 203 ALKLTNDRPSEHVIL 217 + P++ +++ Sbjct: 208 GERAKAKNPADWIVV 222 >gi|70733091|ref|YP_262864.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas fluorescens Pf-5] gi|68347390|gb|AAY94996.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas fluorescens Pf-5] Length = 300 Score = 43.5 bits (101), Expect = 0.041, Method: Compositional matrix adjust. Identities = 54/239 (22%), Positives = 100/239 (41%), Gaps = 8/239 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDD---PS-KIQYL 81 L I + G V F+ V N G G+ V+ + I P+ K++Y Sbjct: 30 LAKIANSASITLGYRDASVPFSYVGDNSGKPMGYSVELASKVVERIQQQLHLPNLKVKYN 89 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 + ++ R +Q+ +D+ +T T R+ + ++ I Y GQ + K GI S + Sbjct: 90 LVTSQTRIPLVQNGTVDLECGSTGVTAERQKQVAFSYGFI-YVKGQ-LLTAKDSGIKSFA 147 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L G ++ AGTT E L Y H + I + E ++ R A+ D + L Sbjct: 148 DLRGKNVVTTAGTTNERFLKSYNVEHKIDMFVISAKDHGEAFQMLQSGRAAAFYMDDALL 207 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQK 259 Y + P V++ + S+ + + + D ++ +V+ + + E+ GI Q+ Sbjct: 208 YGERAKARDPHNWVVVGEEQSREIYSCMVRKDDPQFLALVNGALADLYRSGEINGIYQR 266 >gi|156934833|ref|YP_001438749.1| glutamate and aspartate transporter subunit [Cronobacter sakazakii ATCC BAA-894] gi|156533087|gb|ABU77913.1| hypothetical protein ESA_02680 [Cronobacter sakazakii ATCC BAA-894] Length = 316 Score = 43.5 bits (101), Expect = 0.042, Method: Compositional matrix adjust. Identities = 49/228 (21%), Positives = 87/228 (38%), Gaps = 6/228 (2%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS- 76 S+ S L IK G + G V F+ G+ D+ A+ A+ + P Sbjct: 41 SSGQSTLDKIKANGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKQLNKPDL 100 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 +++ +P+ ++ R LQ+ D +T L R+ AF + G ++ K Sbjct: 101 QVKMIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQA--AFSDTIFVVGTRLLVKKGGP 158 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 I L G ++ V +GTT+E+ L M I + + + R A+ Sbjct: 159 IKDFPDLKGKAVVVTSGTTSEVLLHKLNDEKKMDMRIISAKDHGDSFRTLESGRAVAFMM 218 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 D + L + +P I+ SK + +GD + +V T Sbjct: 219 DDALLAGERAKAKKPDNWEIVGTPQSKEAYGCMLRKGDESFKKLVDET 266 >gi|326317500|ref|YP_004235172.1| family 3 extracellular solute-binding protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374336|gb|ADX46605.1| extracellular solute-binding protein family 3 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 298 Score = 43.5 bits (101), Expect = 0.043, Method: Compositional matrix adjust. Identities = 47/197 (23%), Positives = 79/197 (40%), Gaps = 6/197 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD---PS-KIQ 79 AS L IK G + G GF+ G G+ +D C + AI + P I+ Sbjct: 27 ASTLHKIKDSGAITLGHRESSFGFSYNAGTGTPVGYSIDICMRIVDAIKAELQLPKLDIR 86 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 Y + ++ R + +DI +T T L E +AF P + ++ GI S Sbjct: 87 YQLVTSQNRIPLVAGGTVDIECGST--TNLVERQKLVAFSPDIFRYNVRMLVRADSGIRS 144 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 ++ L G ++ +GTT+ L + K N+ + + + + R A+ D Sbjct: 145 IADLQGKTVVATSGTTSLRLLREADKGRNLDIQQMAGKDHADSFLLVESGRAQAFVLDDI 204 Query: 200 ALYALKLTNDRPSEHVI 216 L L T P + +I Sbjct: 205 LLAGLVATARNPKDFLI 221 >gi|222109804|ref|YP_002552068.1| family 3 extracellular solute-binding protein [Acidovorax ebreus TPSY] gi|221729248|gb|ACM32068.1| extracellular solute-binding protein family 3 [Acidovorax ebreus TPSY] Length = 299 Score = 43.5 bits (101), Expect = 0.043, Method: Compositional matrix adjust. Identities = 51/243 (20%), Positives = 102/243 (41%), Gaps = 7/243 (2%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K ++ ++ ++F+ L IK G + G+ G NG + GF + Sbjct: 2 KKHLLAAAITVLAAGSAFAQANDTLAKIKSTGAVTLGVRES-SGLGYTLGNGKYVGFHTE 60 Query: 63 FCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 + + I +I+Y P+ ++ R + + +DI +T R+ + AF Sbjct: 61 MGERILADIQKQLGLANMEIKYQPVTSQNRIPLVTNGTVDIECGSTTNNTARQKDV--AF 118 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 TY + ++ K GI+ + L+G +I GTT+ TL +A + + ++ + Sbjct: 119 AVTTYVEEVRIAVNAKSGITGIKDLNGKTIVTTTGTTSVQTLRKNKRADGLTFKEVMGKD 178 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R DA+ D S L A + P++ I+ +++S P+A + + D + Sbjct: 179 HADSFLMLETGRADAFIMDGSILAANISKSKNPADFKIVGEVLSVEPIACMLRKDDPAFK 238 Query: 239 NIV 241 V Sbjct: 239 KAV 241 >gi|238064580|ref|ZP_04609289.1| glutamate binding protein [Micromonospora sp. ATCC 39149] gi|237886391|gb|EEP75219.1| glutamate binding protein [Micromonospora sp. ATCC 39149] Length = 381 Score = 43.5 bits (101), Expect = 0.043, Method: Compositional matrix adjust. Identities = 50/220 (22%), Positives = 96/220 (43%), Gaps = 20/220 (9%) Query: 5 FFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 + L I+L F + + + +K R L G+ G ++ N WKGFDV+ Sbjct: 39 VLAAALIPIVLAFGPPTRDELLERAGLKGRQQLLIGVKDDQPGVSQRFPNNVWKGFDVEI 98 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ------IDILSRNTDWTLLREISLGLA 117 ++ + D S++++LP+ +++R Q++ +D++ + T RE G Sbjct: 99 AYMIAGYLGFDRSQVRFLPIESEDR-ARRQARDGDGFVTVDLVIASYSITKQRE-EEGAV 156 Query: 118 FRPITYFDGQGFI----MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 F + Q I + +++ +SS+ LSG ++C +T+ L + P Sbjct: 157 FSAPYLYTEQSVITLDSVGEREQVSSLEDLSGRTVCTLTTSTSAQRLREAGAV------P 210 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 I R+ + + A T D +A+ A +T DRP + Sbjct: 211 IGRNRISDCVQMLYDGKAYAVTTD-AAILAGFVTGDRPDD 249 >gi|50085186|ref|YP_046696.1| glutamate/aspartate ABC transporter substrate-binding protein [Acinetobacter sp. ADP1] gi|49531162|emb|CAG68874.1| glutamate/aspartate transport protein (ABC superfamily, peri_bind) [Acinetobacter sp. ADP1] Length = 297 Score = 43.5 bits (101), Expect = 0.044, Method: Compositional matrix adjust. Identities = 43/195 (22%), Positives = 80/195 (41%), Gaps = 6/195 (3%) Query: 58 GFDVDFCRALSSAIFDD---PS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ VD C ++ I + P+ K++Y + + R L S ID+ T + R+ Sbjct: 60 GYAVDICNNFANDIKKELKMPNLKVEYKAVTSSTRIPELLSGNIDMECGTTTNSKQRQQQ 119 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 +G F Y + GI S++ L+G ++ GTT++ + K ++ Sbjct: 120 VG--FSTNYYATEVRMAVKANSGIKSLADLNGKAVVTTQGTTSDKYIKMNEKGQSINVQN 177 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + + A + R A+ D + L L + P E I+ ++S P I + Sbjct: 178 IYGKDHADSFAMMASGRAAAFVMDDNILAGLIAKSSNPKEFAIVGPVLSSEPYGIMIAKD 237 Query: 234 DTEWYNIVSWTHYAM 248 D ++ + T M Sbjct: 238 DPKFKALADRTVTGM 252 >gi|78066952|ref|YP_369721.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia sp. 383] gi|77967697|gb|ABB09077.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia sp. 383] Length = 306 Score = 43.5 bits (101), Expect = 0.044, Method: Compositional matrix adjust. Identities = 41/195 (21%), Positives = 75/195 (38%), Gaps = 6/195 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQYLP 82 L I++ + G V F+ ANG GF D C + +A+ K ++++P Sbjct: 37 LDKIRQSNLISIGHRETSVPFSYADANGKVIGFSQDLCDRVIAAVKARTGKPDLQVRFIP 96 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R +Q+ +D+ T R +AF + + GI Sbjct: 97 VTSQNRIPLVQNGTVDLECGVTTNLAARHAQ--VAFSTTFFVATTRLLTRTNSGIRDFPD 154 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+G ++ GTT+E L + M I + E + R AY D L Sbjct: 155 LAGKTVVTNQGTTSERLLRKMNEEKKMNMRIISAKDYGEGRLTLESGRAAAYMMDDVLLA 214 Query: 203 ALKLTNDRPSEHVIL 217 ++ +P++ I+ Sbjct: 215 GVRQLAAKPADWQIV 229 >gi|260550662|ref|ZP_05824871.1| glutamate/aspartate transporter [Acinetobacter sp. RUH2624] gi|260406373|gb|EEW99856.1| glutamate/aspartate transporter [Acinetobacter sp. RUH2624] Length = 297 Score = 43.5 bits (101), Expect = 0.045, Method: Compositional matrix adjust. Identities = 54/244 (22%), Positives = 94/244 (38%), Gaps = 7/244 (2%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 VS + L + TS A L IK G + G + V G G+ VD C Sbjct: 8 LIVSTIMLCTVGATSQIQAADTLAKIKSTGKIVIGHRESSDPISYV-VGGKPVGYAVDIC 66 Query: 65 RALSSAIFDD---PS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ I + P K++Y + + R L + ID+ T + R+ +G F Sbjct: 67 NQFANDIKKELKMPGLKVEYKAVTSSTRIPELLAGNIDMECGTTTNSKQRQQQVG--FST 124 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + GI S++ L+G ++ GTT++ + K ++ I + Sbjct: 125 NYYATEVRMAVKANSGIKSLADLNGKAVVTTQGTTSDKYIKMNEKGQSLNVQNIYGKDHS 184 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A + R A+ D + L L + P I+ ++S P I + D ++ I Sbjct: 185 DSFAMMASGRAAAFVMDDNILAGLIAKSSTPKAFAIVGPVLSSEPYGIMIAKDDPKFKAI 244 Query: 241 VSWT 244 T Sbjct: 245 ADRT 248 >gi|121611643|ref|YP_999450.1| extracellular solute-binding protein [Verminephrobacter eiseniae EF01-2] gi|121556283|gb|ABM60432.1| extracellular solute-binding protein, family 3 [Verminephrobacter eiseniae EF01-2] Length = 296 Score = 43.5 bits (101), Expect = 0.046, Method: Compositional matrix adjust. Identities = 50/265 (18%), Positives = 103/265 (38%), Gaps = 20/265 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + ++ + +LF + + A L I + G + V F+ + GF Sbjct: 1 MKRSVLMASMAAAVLFSATGAQAADTLAKIAESGKITLAYRESSVPFSYLDGANKPIGFS 60 Query: 61 VDFCRALSSAI---FDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 V+ A+ A+ + P+ ++ +P+ ++ R L + +D+ +T R + Sbjct: 61 VELSNAVVEAVKKKLNKPNLQVALMPVTSQNRIPLLTNGTVDLECGSTTNNSAR--GKDV 118 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM------- 169 AF ++ G + K I + L+ ++ GTT + Y N+ Sbjct: 119 AFAVNHFYTGTRLLAKKSSKIKDYADLAKKTVASTTGTTNAQVMRKYNADKNLGMDIVLG 178 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 K H F VE + R A+ D L+ L + P+++ ++ + + P A Sbjct: 179 KDHADAFLLVE-------SDRVVAFAMDDILLFGLIANSKNPADYEVVGESLQVEPYACM 231 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEEL 254 + + D + +V T M+ + E Sbjct: 232 LPKDDPAFKKLVDDTFIDMMKSGEF 256 >gi|167589672|ref|ZP_02382060.1| extracellular solute-binding protein, family 3 [Burkholderia ubonensis Bu] Length = 246 Score = 43.5 bits (101), Expect = 0.046, Method: Compositional matrix adjust. Identities = 34/137 (24%), Positives = 61/137 (44%), Gaps = 9/137 (6%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L I K G L+ + F V + +G+D+D L+ A+ K++ +P+N+ Sbjct: 14 LDTIAKNGALRVAVPEDYPPFGSVGTDMQPQGYDIDMAGVLAKALG---VKLKLVPVNSA 70 Query: 87 ERFLALQSKQIDILSRNTDWTLLRE--ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 R L + ++D++ + T RE I A+ P YF QG +S+ L+ Sbjct: 71 NRIPYLTTNKVDMVISSLGKTPEREKVIDFSTAYAP--YF--QGVFGPADVKVSAPDDLT 126 Query: 145 GASICVQAGTTTELTLA 161 G ++ G E+ L+ Sbjct: 127 GKTVGATRGALEEIALS 143 >gi|91785182|ref|YP_560388.1| ABC glutamate/aspartate transporter, periplasmic ligand binding protein [Burkholderia xenovorans LB400] gi|91689136|gb|ABE32336.1| L-glutamate-binding protein / L-aspartate-binding protein [Burkholderia xenovorans LB400] Length = 297 Score = 43.5 bits (101), Expect = 0.047, Method: Compositional matrix adjust. Identities = 47/227 (20%), Positives = 92/227 (40%), Gaps = 6/227 (2%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDP 75 + + +A L IK G + G + F+ + G+ +F + A+ + P Sbjct: 20 AHAQDAGTLKKIKDTGVISLGHRESSIPFSYYDDKQNVIGYSQEFALKVVDAVKQKLNMP 79 Query: 76 S-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 + K++ P+ ++ R +Q+ +D+ +T R+ + AF + G + K Sbjct: 80 NLKVKLTPVTSQNRIPLVQNGTVDMECGSTTNNAERQQQV--AFSNTIFVIGTRLMTKKD 137 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 GI + L G ++ AGTT+E L + +M + I + E R A+ Sbjct: 138 SGIKDWADLKGKTVVTTAGTTSERLLRKMNQDKSMGMNIISAKDHGESFLTLSTGRAAAF 197 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 D + L + ++ P + VI+ S I + D E+ +V Sbjct: 198 MMDDALLAGERAKSNNPGDFVIVGAPQSHEAYGCMIRKNDPEFKKVV 244 >gi|289771597|ref|ZP_06530975.1| sugar-binding protein [Streptomyces lividans TK24] gi|289701796|gb|EFD69225.1| sugar-binding protein [Streptomyces lividans TK24] Length = 352 Score = 43.5 bits (101), Expect = 0.047, Method: Compositional matrix adjust. Identities = 30/118 (25%), Positives = 55/118 (46%), Gaps = 5/118 (4%) Query: 46 GFAEVKANGD--WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103 G+ + + GD +GFD+D ++ + D +Q+ + +R A+Q ++D++ R Sbjct: 112 GYRDPNSGGDAELEGFDIDLAHRIAKDVLGDEDAVQFKAIPTDQRVPAIQDGRVDMVVRT 171 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV-SQLSGASICVQAGTTTELTL 160 T+ + +AF + GQ + K I+ L+G IC AG+T TL Sbjct: 172 M--TINCDRLEDVAFSAPYFRTGQQVLAPKSSKITGYDGTLAGKEICTAAGSTALSTL 227 >gi|237729706|ref|ZP_04560187.1| extracellular solute-binding protein [Citrobacter sp. 30_2] gi|226908312|gb|EEH94230.1| extracellular solute-binding protein [Citrobacter sp. 30_2] Length = 306 Score = 43.5 bits (101), Expect = 0.047, Method: Compositional matrix adjust. Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 10/141 (7%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD----DPSKI 78 NA+ L I+ L G L F+ NG G+ + C ++ + + + Sbjct: 45 NAATLDHIQSSSVLNVGYRQ-LPPFSFTDHNGKVTGYTIAVCNMIADKLRQYLKLNNLTV 103 Query: 79 QYLPLNAKERFLALQSKQIDI-LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 Y+P+N ERF AL S++ID+ NT+ E + ++F Y I +K I Sbjct: 104 HYIPVNFAERFSALNSRKIDMDCGVNTNAP---ERTASVSFSENYYTAKMRIISLRKNNI 160 Query: 138 SSVSQLSGASICVQAGTTTEL 158 S+S L G ++ + G++ +L Sbjct: 161 RSISDLKGRTVSL-TGSSKDL 180 >gi|291295430|ref|YP_003506828.1| extracellular solute-binding protein family 3 [Meiothermus ruber DSM 1279] gi|290470389|gb|ADD27808.1| extracellular solute-binding protein family 3 [Meiothermus ruber DSM 1279] Length = 247 Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust. Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 10/168 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 + ++ L+ L S + S L +++ G L G + F + N GFDVD Sbjct: 5 IVVMVLVGLLGVSGALAQSCLANVRANG-LTVGTSPDYPPFESLDKNNKIIGFDVDLLNL 63 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 + + + K+ ++ + AL +K+ID+++ T R+ S+ RP Y G Sbjct: 64 IGAEL---GVKVNFIGQSFDGLIPALLTKKIDLIAAGLTITEERKKSVDFT-RP--YISG 117 Query: 127 QGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 I+ +K+ GIS + L+G + VQ G+ E +A K +K + Sbjct: 118 PNVIITRKETTGISKLEDLAGKKVAVQIGSAQE-KIASGVKGAEVKSY 164 >gi|330833724|ref|YP_004402549.1| putative amino acid ABC transporter substrate-binding protein [Streptococcus suis ST3] gi|329307947|gb|AEB82363.1| putative amino acid ABC transporter, substrate-binding protein [Streptococcus suis ST3] Length = 283 Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust. Identities = 41/140 (29%), Positives = 58/140 (41%), Gaps = 12/140 (8%) Query: 37 KCGINTGLVG----FAEVKANGDWKGFDVDFCRALSSAIFD--DPSKIQYLPLNAKERFL 90 K I G VG F+ NG+ GFD++ R AIFD D ++ + + +F Sbjct: 40 KETIVMGTVGTTKPFSYRDENGELTGFDIELAR----AIFDGSDQYELTFETTDGSGQFP 95 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150 L S + D+L NT +T +E + T + K I S + G S V Sbjct: 96 GLDSGRFDLLGNNTSYT--KERGEKYLYSYPTASTPSVLAVPKDTDIQSYDDIGGHSTQV 153 Query: 151 QAGTTTELTLADYFKAHNMK 170 GTTT L +Y H K Sbjct: 154 VTGTTTAAQLEEYNTQHTDK 173 >gi|319942018|ref|ZP_08016337.1| glutamine ABC transporter [Sutterella wadsworthensis 3_1_45B] gi|319804402|gb|EFW01280.1| glutamine ABC transporter [Sutterella wadsworthensis 3_1_45B] Length = 265 Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust. Identities = 37/116 (31%), Positives = 58/116 (50%), Gaps = 9/116 (7%) Query: 46 GFAEVKANGDWKGFDVDFCRALS-SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 GF + K G++ GFDVD RA+ +A F K++ +P + AL+++ IDI + Sbjct: 50 GFKDSK-TGEFVGFDVDIIRAIGRTAGFR--VKVENIPFDG--LIPALKTRTIDIAINDI 104 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELT 159 T R S+ + R Y G G ++ K +GI S L G + V G+T E+ Sbjct: 105 GITAERAKSVDFSDR--YYIAGMGIVVAKGYQGIQSAKDLEGKRLAVTIGSTGEIA 158 >gi|296157669|ref|ZP_06840503.1| extracellular solute-binding protein family 3 [Burkholderia sp. Ch1-1] gi|295891915|gb|EFG71699.1| extracellular solute-binding protein family 3 [Burkholderia sp. Ch1-1] Length = 264 Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust. Identities = 44/192 (22%), Positives = 82/192 (42%), Gaps = 13/192 (6%) Query: 9 ILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 + LI FT+ + +A +L +K+RG L+ G+ F +G+ G+DVD +A+ Sbjct: 11 VAGLIGASFTAVTAHADDLLDQVKQRGTLRIGLEGTFPPFNSKAPSGELVGYDVDIAKAV 70 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 ++ + P +++ LQ+ + D++ T R+ +L F P + Sbjct: 71 AAKLGVKP---EFVTTEWSGIIAGLQAGKFDVIVNQVGITDARKQALD--FSPAYTYSAA 125 Query: 128 GFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 I K + S+ L G + V GT + +A ++K +P E + ++ Sbjct: 126 QLIQRKDDTRQFKSLEDLKGKKLGVGLGTNY-MDMAKSVPGIDVKTYPGAPEYLRDL--- 181 Query: 186 YRAHRCDAYTGD 197 A R DA D Sbjct: 182 -AAGRLDAALND 192 >gi|91783311|ref|YP_558517.1| polar amino acid ABC transporter periplasmic ligand-binding protein [Burkholderia xenovorans LB400] gi|91687265|gb|ABE30465.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia xenovorans LB400] Length = 264 Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust. Identities = 44/192 (22%), Positives = 82/192 (42%), Gaps = 13/192 (6%) Query: 9 ILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 + LI FT+ + +A +L +K+RG L+ G+ F +G+ G+DVD +A+ Sbjct: 11 VAGLIGASFTAVTAHADDLLDQVKQRGTLRIGLEGTFPPFNSKAPSGELVGYDVDIAKAV 70 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 ++ + P +++ LQ+ + D++ T R+ +L F P + Sbjct: 71 AAKLGVKP---EFVTTEWSGIIAGLQAGKFDVIVNQVGITDARKQALD--FSPAYTYSAA 125 Query: 128 GFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 I K + S+ L G + V GT + +A ++K +P E + ++ Sbjct: 126 QLIQRKDDTRQFKSLEDLKGKKLGVGLGTNY-MDMAKSVPGIDVKTYPGAPEYLRDL--- 181 Query: 186 YRAHRCDAYTGD 197 A R DA D Sbjct: 182 -AAGRLDAALND 192 >gi|317057988|gb|ADU90705.1| putative amino acid transporter periplasmic ligand binding protein [Collimonas sp. MPS11E8] Length = 268 Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust. Identities = 47/199 (23%), Positives = 86/199 (43%), Gaps = 10/199 (5%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + +A L DI+KRG L+ + F V A +G D+D ++ + K+Q Sbjct: 24 AAHADSLSDIQKRGVLRIAVPQDFAPFGSVTAELKLQGLDIDVAGLVAKNMG---LKLQL 80 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +P+ + R LQ+ + D++ RE + + +P + ++ F K +S Sbjct: 81 VPVTSANRIAYLQTAKADLVISTLGKNAEREKVIAFS-QPYSPYNNSVFGPTAIK-VSGP 138 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY-TGDIS 199 + L+G +I V GT + L++ +E + +AY A + TGD Sbjct: 139 ADLAGKTIGVARGTFQDSQLSETAPPSATIKR---YEDNNGMISAYLAGQVQLVGTGDFV 195 Query: 200 AL-YALKLTNDRPSEHVIL 217 A+ A K T ++P I+ Sbjct: 196 AVALAAKTTGNKPQMKYII 214 >gi|221214523|ref|ZP_03587494.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia multivorans CGD1] gi|221165780|gb|EED98255.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia multivorans CGD1] Length = 378 Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust. Identities = 49/239 (20%), Positives = 96/239 (40%), Gaps = 11/239 (4%) Query: 12 LIILFFTSFSTNAS-----ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 L++ +F++ A L IK G + G + F+ N G+ +F Sbjct: 89 LMVAALCAFASGAQAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGYSREFQLK 148 Query: 67 LSSAI---FDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + A+ + P+ +++ +P+ ++ R +Q+ +DI +T R+ AF Sbjct: 149 VVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNAERQQQA--AFSNTI 206 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 + G + K G+ + L G ++ AGTT+E L M + I + + Sbjct: 207 FVIGTRLMTKKDSGVKDFADLKGKTVVTTAGTTSERLLRKMNNDKQMGMNIISAKDHGDS 266 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + R A+ D + L + +P E VI+ S+ + +GD E+ +V Sbjct: 267 FNTLESGRAVAFMMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDPEFKKVV 325 >gi|289671688|ref|ZP_06492578.1| glutamine ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. syringae FF5] gi|330982576|gb|EGH80679.1| glutamine ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 277 Score = 43.5 bits (101), Expect = 0.049, Method: Compositional matrix adjust. Identities = 51/241 (21%), Positives = 102/241 (42%), Gaps = 23/241 (9%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGF-AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 + +A L D+ + L CG+ + F A + G DVD C+AL+ + +++ Sbjct: 19 AVHADQLSDVMSKKSLSCGVYADVPPFSAPDPQTRELVGMDVDLCKALAKHMG---VELE 75 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 PL+ + R ++ ++D++ N +T R + + F Y + ++ Sbjct: 76 LKPLSVEARIPEVKMGRVDVIFANLAYTKSR--AEQIQFSDPYYIAKETLVVRAANADQP 133 Query: 140 VSQLSGASICVQAGTTTE--LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 S G I G+T+E + LAD P+ F ++ +AY A + + G Sbjct: 134 KSFFKGKRISSTKGSTSEQSIRLAD--------ATPVTF---QDTGSAYMALQQNKVVGL 182 Query: 198 IS-ALYALKLTNDRPS---EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 ++ + A+KL + E I + ++ P+ + QG+ + V+ + M A E Sbjct: 183 VTNTMTAIKLVGQAKAGGVELAIAKEPMALEPIGAGMRQGEPAFLAKVNESLREMEAAGE 242 Query: 254 L 254 + Sbjct: 243 I 243 >gi|229829988|ref|ZP_04456057.1| hypothetical protein GCWU000342_02094 [Shuttleworthia satelles DSM 14600] gi|229791286|gb|EEP27400.1| hypothetical protein GCWU000342_02094 [Shuttleworthia satelles DSM 14600] Length = 294 Score = 43.5 bits (101), Expect = 0.049, Method: Compositional matrix adjust. Identities = 52/241 (21%), Positives = 102/241 (42%), Gaps = 41/241 (17%) Query: 28 GDIKKRG-FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL--PLN 84 GD+K L G + F + +NG++ GFD++ + ++ + K++ + P++ Sbjct: 49 GDVKNTDQNLIVGFDQNFPPFGYLDSNGNFTGFDLELAQEAANRM-----KVELVLQPID 103 Query: 85 AKERFLALQSKQIDIL-------SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 + + + L + ID + R ++T F + Q F++ K GI Sbjct: 104 WETKDMELSAGTIDCIWNGFSVNGREKNYT----------FSDSYMNNAQVFVVRKNSGI 153 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV---FERVEEIDAAYRAHRCDAY 194 L+G + VQ ++ E L N K + F ++ ++ A Y D Sbjct: 154 EDEQGLAGKVVDVQKESSAETAL-------NSKEEETLKNSFAQLNQV-ADYNTAMMDLE 205 Query: 195 TGDISAL-----YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 +G + A+ AL ++P + IL + IS A A ++G+T+ + V+ + M Sbjct: 206 SGAVDAVAMDKFVALDQMKNKPDKFQILNEQISSEQYAVAFLKGNTQLRDQVNSVLHEMD 265 Query: 250 T 250 T Sbjct: 266 T 266 >gi|146311037|ref|YP_001176111.1| cationic amino acid ABC transporter, periplasmic binding protein [Enterobacter sp. 638] gi|145317913|gb|ABP60060.1| L-arginine-binding protein [Enterobacter sp. 638] Length = 243 Score = 43.5 bits (101), Expect = 0.049, Method: Compositional matrix adjust. Identities = 50/201 (24%), Positives = 79/201 (39%), Gaps = 30/201 (14%) Query: 47 FAEVKANGDWKGFDVDFCRALSSAI-----FDDPSKIQYLPLNAKERFLALQSKQIDILS 101 F + AN GFDVD AL I F + S +P +L+ K+ID + Sbjct: 34 FESIDANNKIVGFDVDLANALCKEIDATCTFANQSFDSLIP--------SLKFKRIDAVM 85 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 D T RE + + Y+D + +K +S+ L G + VQ GTT + + Sbjct: 86 AGMDITPEREKQVLFS---TPYYDNSALFIGQKGKFASIDLLKGKKVGVQNGTTHQKFI- 141 Query: 162 DYFKAHNMKYHP----IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHV 215 M HP + ++ + + R DA GD + + ND+ P Sbjct: 142 -------MDKHPEITTVPYDSYQNAKLDLQNGRIDAVFGDTAVVTEWLKANDKLAPVGDK 194 Query: 216 ILPDIISKSPLAPAIIQGDTE 236 + + L A+ QG+TE Sbjct: 195 VTDKDYFGTGLGIAVRQGNTE 215 >gi|300705482|ref|YP_003747085.1| amino-acid ABC transporter binding protein ybej [Ralstonia solanacearum CFBP2957] gi|299073146|emb|CBJ44504.1| Amino-acid ABC transporter binding protein ybeJ [Ralstonia solanacearum CFBP2957] Length = 299 Score = 43.5 bits (101), Expect = 0.050, Method: Compositional matrix adjust. Identities = 40/194 (20%), Positives = 77/194 (39%), Gaps = 7/194 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQYLP 82 L I+ G ++ V F+ G G+ +D C + AI P K+QY+P Sbjct: 31 LDRIRDTGTIRLAYREDSVPFSYTDG-GKPIGYSIDICSRVVDAIRTSLKRPELKVQYVP 89 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + A R + S + D+ +T+ R + AF Y ++ G+ Sbjct: 90 VTAANRMDTIASGKADLECGSTNNAPDRREKV--AFTIPHYITKGRMLVKASSGLQQWED 147 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G ++ G++ + A M + ++ + + DA+ GD L Sbjct: 148 LHGKTVVAARGSSAADVMHKLNDATGMGMRTVDTNDLKTAFSMLSTGKADAFAGDDVLLA 207 Query: 203 ALKLTNDRPSEHVI 216 ++ T+D P+++V+ Sbjct: 208 GMRATSDNPTDYVV 221 >gi|282852735|ref|ZP_06262077.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus gasseri 224-1] gi|282556477|gb|EFB62097.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus gasseri 224-1] Length = 243 Score = 43.5 bits (101), Expect = 0.050, Method: Compositional matrix adjust. Identities = 41/140 (29%), Positives = 63/140 (45%), Gaps = 5/140 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 AS IK+RG L G++ V + NG GFDVD A+ I P Q + Sbjct: 8 ASSWQKIKERGTLVIGVDDSFVPMDFRQKNGKLVGFDVDLATAVCKEIGLKPD-FQTIDW 66 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 + KE L++ ID++ T R + + RP D Q + KK+ I++ Q+ Sbjct: 67 SMKE--TELRNGTIDVIWNGYTKTKARAKKVAFS-RPYLEND-QILVTRKKEQINNYCQM 122 Query: 144 SGASICVQAGTTTELTLADY 163 G + VQ G++ L +Y Sbjct: 123 KGRILGVQTGSSGADDLDNY 142 >gi|70733919|ref|YP_257559.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas fluorescens Pf-5] gi|68348218|gb|AAY95824.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas fluorescens Pf-5] Length = 265 Score = 43.5 bits (101), Expect = 0.050, Method: Compositional matrix adjust. Identities = 55/227 (24%), Positives = 97/227 (42%), Gaps = 16/227 (7%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + A + D KRG LK G++ + F G+ GF+VD +A++ ++ K++ Sbjct: 20 TAQAGAIDDAVKRGTLKVGMDPTYMPFEMTNKRGEIIGFEVDLLKAMAKSM---GVKLEM 76 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGIS 138 + AL + + D++ + TL +E +L L F GQ ++ K + I Sbjct: 77 VSTGYDGIIPALLTDKFDMIG--SGMTLTQERNLRLNFSEPFIVVGQTLLIRKDLEGTIK 134 Query: 139 SVSQLSGAS--ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 S L+ A I + GTT E+ KYH E+ +D + DA+ Sbjct: 135 SYKDLNSADYRITSKLGTTGEMVAKKLIA--KAKYHGYDNEQEAVLDVV--NGKADAFIY 190 Query: 197 DISALYALKLTNDRPSEHVILPDI-ISKSPLAPAIIQGDTEWYNIVS 242 D A Y + N + ++ D + PLA + +GD + N ++ Sbjct: 191 D--APYNVVAVNKVGNGKLVFLDKPFTYEPLAFGLKKGDYDSINFIN 235 >gi|21221120|ref|NP_626899.1| sugar-binding protein [Streptomyces coelicolor A3(2)] gi|20520796|emb|CAB71196.2| putative sugar-binding protein [Streptomyces coelicolor A3(2)] Length = 352 Score = 43.5 bits (101), Expect = 0.050, Method: Compositional matrix adjust. Identities = 30/118 (25%), Positives = 55/118 (46%), Gaps = 5/118 (4%) Query: 46 GFAEVKANGD--WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103 G+ + + GD +GFD+D ++ + D +Q+ + +R A+Q ++D++ R Sbjct: 112 GYRDPNSGGDAELEGFDIDLAHRIAKDVLGDEDAVQFKAIPTDQRVPAIQDGRVDMVVRT 171 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV-SQLSGASICVQAGTTTELTL 160 T+ + +AF + GQ + K I+ L+G IC AG+T TL Sbjct: 172 M--TINCDRLEDVAFSAPYFRTGQQVLAPKSSKITGYDGTLAGKEICTAAGSTALSTL 227 >gi|329906185|ref|ZP_08274376.1| Glutamate Aspartate periplasmic binding protein precursor gltI [Oxalobacteraceae bacterium IMCC9480] gi|327547318|gb|EGF32154.1| Glutamate Aspartate periplasmic binding protein precursor gltI [Oxalobacteraceae bacterium IMCC9480] Length = 313 Score = 43.5 bits (101), Expect = 0.051, Method: Compositional matrix adjust. Identities = 35/203 (17%), Positives = 83/203 (40%), Gaps = 6/203 (2%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS----KIQYLP 82 L IK G + G+ + F+ + ++G+ +D C + ++I + ++ P Sbjct: 28 LKKIKDSGQITLGVRDSSIPFSYLDDKQSYQGYSIDICMKIVTSIQKELGMTSLNVKLNP 87 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + + R + + +D++ + + R+ + +F P T+ + K I ++ Sbjct: 88 VTSATRIPLMANGTVDLVCGSATNNIERQKQV--SFAPTTFVTANRLLAKKSSNIKTLDD 145 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 + G S+ +GT+ L N+ + + + E R A+ D L Sbjct: 146 MKGKSLVSTSGTSNLKQLVQLNGDRNLGMNVMTAKDHAEAFLMVETGRAVAFGMDDILLA 205 Query: 203 ALKLTNDRPSEHVILPDIISKSP 225 +L ++ P+++ I + +S P Sbjct: 206 SLAASSKSPADYSITTEALSTEP 228 >gi|229589724|ref|YP_002871843.1| putative ABC transporter exported solute-binding protein [Pseudomonas fluorescens SBW25] gi|229361590|emb|CAY48467.1| putative ABC transport system, exported solute-binding protein [Pseudomonas fluorescens SBW25] Length = 283 Score = 43.5 bits (101), Expect = 0.052, Method: Compositional matrix adjust. Identities = 40/172 (23%), Positives = 77/172 (44%), Gaps = 11/172 (6%) Query: 1 MYKDFFVSILCLI--ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWK 57 ++ ++ LCL + S + + L I++R + G+ F + G+ + Sbjct: 4 LFSTKALASLCLAGALASGASLARADATLDKIEQRHVINIGVMLSGPPFGTIDPKTGEHQ 63 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR-EISLGL 116 G++V+ + ++ A+ + + + L A R LQ ++DIL N +T R EI L Sbjct: 64 GYNVELAKGVAKALGVEANTVSVL---APNRVQFLQQGKVDILIANMQFTEERGEI---L 117 Query: 117 AFRPITYFD-GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 + P Y + G ++ K GI+ + L G +CV G+ L + + A Sbjct: 118 DYVPTPYEEVGGAALIRKGSGITQWADLKGKPVCVSQGSNFIKPLQETYGAQ 169 >gi|86609571|ref|YP_478333.1| cystine ABC transporter, periplasmic cystine-binding protein [Synechococcus sp. JA-2-3B'a(2-13)] gi|86558113|gb|ABD03070.1| cystine ABC transporter, periplasmic cystine-binding protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 287 Score = 43.5 bits (101), Expect = 0.052, Method: Compositional matrix adjust. Identities = 31/143 (21%), Positives = 57/143 (39%), Gaps = 19/143 (13%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 + + +L +++RG L+ ++ + +G W+GFDVD R ++ Sbjct: 30 LAQGSDLLAQVQERGVLRISTDSNYRPQSYRNPDGSWEGFDVDVAREIAKR--------- 80 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDW-------TLLREISLGLAFRPITYFDGQGFIMH 132 L + FL + I S N W T+ E L F Y+ F++H Sbjct: 81 ---LGVEAEFLDINFDVITAGSWNGRWDVNVGSMTVTAERQKALLFTIPYYYTPASFVVH 137 Query: 133 KKKGISSVSQLSGASICVQAGTT 155 + ++ ++ L G + V TT Sbjct: 138 QASTLTDIAALEGKRVGVGTATT 160 >gi|303248475|ref|ZP_07334733.1| extracellular solute-binding protein family 3 [Desulfovibrio fructosovorans JJ] gi|302490095|gb|EFL50015.1| extracellular solute-binding protein family 3 [Desulfovibrio fructosovorans JJ] Length = 271 Score = 43.1 bits (100), Expect = 0.053, Method: Compositional matrix adjust. Identities = 51/221 (23%), Positives = 91/221 (41%), Gaps = 15/221 (6%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 S L I +RG L G+ F V G+ GFDVD + L+ + K++ Sbjct: 33 EGSNLRKIVQRGTLVVGMELKFWPFEYVDKEGNPVGFDVDIAKTLADRL---GVKLEIKD 89 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSV 140 + AL + +ID++ TL R S + F + G ++ K+ + +V Sbjct: 90 MEWTGLIPALTAGKIDLIISGISGTLERAKS--ITFTSPYFTTGLCALLSAKRAGDVKNV 147 Query: 141 SQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 L+ G + V+ GTT +L F + + V+E+ A R DA+ D Sbjct: 148 DALNAPGRVLAVKTGTTADLVATKKFTKATINRYKDETACVQEVVAG----RADAFFYDQ 203 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 ++ N ++ ++ P + P A+ +GD +W+ Sbjct: 204 ISIAKHHKQNPEATKAILKP--FTYEPFCIALQKGDFDWWQ 242 >gi|319795551|ref|YP_004157191.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] gi|315598014|gb|ADU39080.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] Length = 319 Score = 43.1 bits (100), Expect = 0.054, Method: Compositional matrix adjust. Identities = 50/234 (21%), Positives = 97/234 (41%), Gaps = 10/234 (4%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD---PS-KIQYLP 82 + I++ + G+ F+ V A G+ VD C I + P K+QY P Sbjct: 48 MSKIRETRTIVLGVREAAAPFSFVNAQKQPVGYSVDLCMNAVEEIRRELKLPDIKVQYKP 107 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF-DGQGFIMHKKKGISSVS 141 ++ +R L S +ID+ +T T+ R+ + ++ T+F G + + + +V Sbjct: 108 VSGPDRIPKLLSGEIDLECGSTTNTMARQEKVDFSY---TFFVAGMRVLTSQNLHVDTVK 164 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L + + GTT+E + ++ E A + + A+ D S L Sbjct: 165 DLQKQPVALTKGTTSEKLFRQLAEGELRDAKFTTYDNNVEAFKALKEGKVRAFAQDDSLL 224 Query: 202 YALKLTNDRPSEHVILPDI-ISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 L ++ND+ + + L + +S P A +GDT V + + ++ E+ Sbjct: 225 QGL-VSNDKTIDTLSLSRLALSVEPYAVMARKGDTALLAAVDRSLAQLYSSGEI 277 >gi|146307037|ref|YP_001187502.1| cystine transporter subunit [Pseudomonas mendocina ymp] gi|145575238|gb|ABP84770.1| L-cystine-binding protein / Diaminopimelate-binding protein [Pseudomonas mendocina ymp] Length = 265 Score = 43.1 bits (100), Expect = 0.054, Method: Compositional matrix adjust. Identities = 43/167 (25%), Positives = 70/167 (41%), Gaps = 7/167 (4%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 S+ ++ F+ S A +L DIK RG +K G+ F A+G GF+V+ AL Sbjct: 14 SLTLVLSSAFSLPSLAADLLDDIKARGAIKIGLEGTYPPFNYQDASGKLTGFEVELAEAL 73 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + K ++ P AL+SK++D++ T+ E F G Sbjct: 74 AKEL---GVKAEFQPTKWDGILAALESKRLDVVINQV--TISDERRKKYDFSTPYTVSGI 128 Query: 128 GFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + K G I S L+G + V GT E L D +++ + Sbjct: 129 QALTRKADGDSIKSAQDLAGKKVGVGLGTNYEQWLKDNVPQADIRTY 175 >gi|183601790|ref|ZP_02963160.1| glutamate-binding protein of ABC transporter system [Bifidobacterium animalis subsp. lactis HN019] gi|241190712|ref|YP_002968106.1| amino acid ABC transporter periplasmic component [Bifidobacterium animalis subsp. lactis Bl-04] gi|183219396|gb|EDT90037.1| glutamate-binding protein of ABC transporter system [Bifidobacterium animalis subsp. lactis HN019] gi|240249104|gb|ACS46044.1| ABC-type amino acid transport system periplasmic component [Bifidobacterium animalis subsp. lactis Bl-04] gi|289178450|gb|ADC85696.1| Glutamate-binding protein [Bifidobacterium animalis subsp. lactis BB-12] gi|295793701|gb|ADG33236.1| ABC-type amino acid transport system periplasmic component [Bifidobacterium animalis subsp. lactis V9] Length = 279 Score = 43.1 bits (100), Expect = 0.055, Method: Compositional matrix adjust. Identities = 34/159 (21%), Positives = 74/159 (46%), Gaps = 7/159 (4%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 ++++C F + +S KK ++ GI G K +G ++GFDVD R Sbjct: 14 IAMVCAASALFGMAACGSSSADGEKK---IRIGIKYDQPGLG-FKKSGTFEGFDVDVARY 69 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 +++ + ++I++L +K+R LQ+ +D++ +++ E ++F + G Sbjct: 70 VANQLGYTDAEIEFLEAPSKQREAMLQNGDVDMILAT--YSITDERKKAVSFAGPYFVAG 127 Query: 127 QGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYF 164 Q ++ I+ L+G +C G+T+ + + F Sbjct: 128 QDLMVRADDHSINGPEDLNGKRLCSVTGSTSAKVVKERF 166 >gi|306829415|ref|ZP_07462605.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus mitis ATCC 6249] gi|304428501|gb|EFM31591.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus mitis ATCC 6249] Length = 263 Score = 43.1 bits (100), Expect = 0.056, Method: Compositional matrix adjust. Identities = 48/212 (22%), Positives = 88/212 (41%), Gaps = 33/212 (15%) Query: 9 ILCLIILFFTSFSTNASILGD---------IKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 I ++ LFF+ F T + +K+G + G + V + NG + GF Sbjct: 6 IALVLALFFSFFLTACTQKASDPKQDNWAKYQKQGSITIGFDNTFVPMGFEEKNGQYAGF 65 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D +A+S + +I++ P++ + LQ+ ID + T R+ + Sbjct: 66 DIDLAQAVSEKL---GIQIKFQPIDWDMKETELQNGTIDAIWNGYSATDERKEKVSFT-- 120 Query: 120 PITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I Y + Q ++ KK + I S+ ++ ++ QAG++ L N + P Sbjct: 121 -IPYMENQQVLVSKKSQNIHSIQDMTDKTLGAQAGSSGYL---------NFERQP----- 165 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 E + + + + Y AL LK NDR Sbjct: 166 -EPLKNRVKDQKANQYQSFNEALIDLK--NDR 194 >gi|28210295|ref|NP_781239.1| cystine/glutamine-binding periplasmic protein [Clostridium tetani E88] gi|28202731|gb|AAO35176.1| cystine/glutamine-binding periplasmic protein [Clostridium tetani E88] Length = 272 Score = 43.1 bits (100), Expect = 0.056, Method: Compositional matrix adjust. Identities = 61/250 (24%), Positives = 101/250 (40%), Gaps = 22/250 (8%) Query: 5 FFVSILCLIILFFTSFSTNA--------SILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 F VS+L +I + S S L IKK G LK G+N + + Sbjct: 11 FLVSMLLIIGCGNKNTSNKGNDKNNKSLSTLEKIKKDGVLKMGLNDTYPPMEFRDESHNL 70 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFDVD + ++ + K++ + + L+L+SK+ D++ T R+ + Sbjct: 71 VGFDVDLGKEIAKKL---GVKLEIITNDWSGIVLSLKSKKYDMILSTMSITEERKKEMN- 126 Query: 117 AFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F GQ ++ K +K I V L G I Q GTT E++ +K + V Sbjct: 127 -FSEPYIVGGQKLVVKKDEKDIKKVEDLKGKVIGCQMGTTGEVSANKIEGIKELKKYDGV 185 Query: 176 FERVEEIDAAYRAHRCDAYTGDIS-ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + ++ R +A D A Y LK R + V+L ++ P+ + D Sbjct: 186 TQAFNDLSVG----RINAVIADGQVAGYYLK---KRSGDLVLLDTKLTSEPVGIGFRKED 238 Query: 235 TEWYNIVSWT 244 T+ + V T Sbjct: 239 TDIRDEVQKT 248 >gi|319761413|ref|YP_004125350.1| extracellular solute-binding protein family 3 [Alicycliphilus denitrificans BC] gi|317115974|gb|ADU98462.1| extracellular solute-binding protein family 3 [Alicycliphilus denitrificans BC] Length = 299 Score = 43.1 bits (100), Expect = 0.057, Method: Compositional matrix adjust. Identities = 51/251 (20%), Positives = 101/251 (40%), Gaps = 6/251 (2%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K ++ ++ ++ + L IK G + G+ A +G + GF + Sbjct: 2 KKHLLAAAITVLAAGSAIAQANDTLAKIKSSGAITLGVRESSGALAYTLGDGKYVGFHTE 61 Query: 63 FC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 R L + +I+Y P+ ++ R + + +D+ +T L R+ + AF Sbjct: 62 MAERVARDLQKKLGLSKLEIKYQPVTSQNRIPLVVNGTVDLECGSTTNNLARQKDV--AF 119 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 TY + + GIS + L+G +I GTT+ TL +A M + ++ + Sbjct: 120 ANTTYVEEVRIAVKANSGISDIKDLNGKTIVTTTGTTSVQTLRKNKRAEGMNFREVMGKD 179 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R DA+ D S L + P++ I+ + +S P+A + + D + Sbjct: 180 HADSFLMLETGRADAFIMDGSILAGNISKSKNPNDFKIVGEALSVEPIACMLRKDDPAFK 239 Query: 239 NIVSWTHYAMV 249 V + A + Sbjct: 240 KAVDESIVAQI 250 >gi|171317513|ref|ZP_02906703.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MEX-5] gi|171097342|gb|EDT42187.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MEX-5] Length = 264 Score = 43.1 bits (100), Expect = 0.057, Method: Compositional matrix adjust. Identities = 41/174 (23%), Positives = 73/174 (41%), Gaps = 12/174 (6%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 +L +K+RG L+ G+ F G+ GFDVD +A+++ + K +++ Sbjct: 29 LLDQVKQRGTLRVGLEGTFPPFNSKNPQGELVGFDVDIAKAVAAKLG---VKAEFVTTEW 85 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQL 143 LQ+ + D++S T R+ +L F P + I K + S+ L Sbjct: 86 SGIIAGLQAGKFDVISNQVGITDKRKETLD--FSPAYTYSSAQLIQRKDDTREFKSLEDL 143 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 G + V GT + +A ++K +P E + ++ A R DA D Sbjct: 144 KGKKLGVALGTNY-MDMAKSVPGIDVKTYPGAPEYLRDLAAG----RLDAALND 192 >gi|206561695|ref|YP_002232460.1| periplasmic glutamate/aspartate-binding protein [Burkholderia cenocepacia J2315] gi|198037737|emb|CAR53681.1| periplasmic glutamate/aspartate-binding protein [Burkholderia cenocepacia J2315] Length = 297 Score = 43.1 bits (100), Expect = 0.058, Method: Compositional matrix adjust. Identities = 46/239 (19%), Positives = 95/239 (39%), Gaps = 6/239 (2%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 +++ L + + L IK G + G + F+ N G+ +F Sbjct: 8 LTVAALCAFASGAHAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGYSREFQLK 67 Query: 67 LSSAI---FDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + A+ + P+ +++ +P+ ++ R +Q+ +DI +T L R+ AF Sbjct: 68 VVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLERQQQA--AFSDTI 125 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 + G + K G+ + L G ++ AGTT+E L + + I + + Sbjct: 126 FVIGTRLMTKKDSGVKDFADLKGKTVVTTAGTTSERLLRKMNNDKQLGMNIISAKDHGDS 185 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + R A+ D + L + +P E VI+ S+ + +GD ++ +V Sbjct: 186 FNTLESGRAVAFMMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDADFKKVV 244 >gi|264679052|ref|YP_003278959.1| amino-acid ABC transporter bindingprotein ybeJ precursor [Comamonas testosteroni CNB-2] gi|262209565|gb|ACY33663.1| amino-acid ABC transporter bindingprotein ybeJ precursor [Comamonas testosteroni CNB-2] Length = 303 Score = 43.1 bits (100), Expect = 0.059, Method: Compositional matrix adjust. Identities = 51/234 (21%), Positives = 95/234 (40%), Gaps = 8/234 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC-RALS--SAIFDDPS-KIQYLP 82 L I+ G + G+ + NG + GF V+ C +AL+ P +I+Y Sbjct: 21 LDRIRDTGVVTMGVREASGTMSYTLGNGKYAGFHVELCEKALARMQQQLKLPRLEIRYQM 80 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + A+ R + + +D+ T R+ + AF P Y + + K GI+ V+Q Sbjct: 81 VTAQNRVPLVANGTVDVECGTTTNNAARQKEV--AFAPTVYMEEVRTAVRKSSGITEVAQ 138 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G + G T L + K + ++ ++ + E R DA D + Sbjct: 139 LKGRKVAATTGATAVTLLRRFSKEKGVDFNVLMAKDNAECFVLLETGRADACVAD-GQIL 197 Query: 203 ALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 A L+ R P ++ I+ + S P+A + + E+ + M ++ E+ Sbjct: 198 ASGLSRLRDPGQYAIVGEPFSVEPIAIMLDRKSPEFKKLFDAQIREMASSGEVA 251 >gi|239814903|ref|YP_002943813.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] gi|239801480|gb|ACS18547.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] Length = 290 Score = 43.1 bits (100), Expect = 0.059, Method: Compositional matrix adjust. Identities = 48/196 (24%), Positives = 84/196 (42%), Gaps = 38/196 (19%) Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL-----SRNTDWTLLREI 112 GFD R L++++ ++ + L+ + AL+ ++D+L +R+T Sbjct: 79 GFDATLARQLAASLG---VPLELVGLDPAAQEAALREGRVDLLVAGVPARSTH------- 128 Query: 113 SLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 G+A P +Y G+G ++ ++G + S L GAS+CV G+ ++ + A Y Sbjct: 129 --GIAAAPGSYDTGRGLVVSLRRGKVQEPSALRGASVCVGEGSGYAAAVSQRYGAQPRSY 186 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND------------RPSEHVI-LP 218 V +A+ A C A D L L + + PS+ I LP Sbjct: 187 PSSV-----HAASAFMAGECAALAEDAEVLERLMRSEEWRFYKPLAGDLRPPSDAAIRLP 241 Query: 219 --DIISKSPLAPAIIQ 232 D +S+ LA A+ Q Sbjct: 242 EGDAMSRDYLAAALRQ 257 >gi|116629031|ref|YP_814203.1| amino acid ABC transporter periplasmic protein [Lactobacillus gasseri ATCC 33323] gi|311111174|ref|ZP_07712571.1| amino acid ABC transporter, amino acid-binding protein [Lactobacillus gasseri MV-22] gi|116094613|gb|ABJ59765.1| amino acid ABC transporter substrate-binding protein, PAAT family [Lactobacillus gasseri ATCC 33323] gi|311066328|gb|EFQ46668.1| amino acid ABC transporter, amino acid-binding protein [Lactobacillus gasseri MV-22] Length = 263 Score = 43.1 bits (100), Expect = 0.059, Method: Compositional matrix adjust. Identities = 41/140 (29%), Positives = 63/140 (45%), Gaps = 5/140 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 AS IK+RG L G++ V + NG GFDVD A+ I P Q + Sbjct: 28 ASSWQKIKERGTLVIGVDDSFVPMDFRQKNGKLVGFDVDLATAVCKEIGLKPD-FQTIDW 86 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 + KE L++ ID++ T R + + RP D Q + KK+ I++ Q+ Sbjct: 87 SMKE--TELRNGTIDVIWNGYTKTKARAKKVAFS-RPYLEND-QILVTRKKEQINNYCQM 142 Query: 144 SGASICVQAGTTTELTLADY 163 G + VQ G++ L +Y Sbjct: 143 KGRILGVQTGSSGADDLDNY 162 >gi|293365297|ref|ZP_06612014.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus oralis ATCC 35037] gi|307703837|ref|ZP_07640778.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus oralis ATCC 35037] gi|291316747|gb|EFE57183.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus oralis ATCC 35037] gi|307622672|gb|EFO01668.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus oralis ATCC 35037] Length = 279 Score = 43.1 bits (100), Expect = 0.060, Method: Compositional matrix adjust. Identities = 33/131 (25%), Positives = 63/131 (48%), Gaps = 7/131 (5%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 +K+G + G + V + NG + GFD+D +A+S + +I++ P++ + Sbjct: 37 QKQGSITIGFDNTFVPMGFEEKNGQYAGFDIDLAQAVSEKL---GIQIKFQPIDWDMKET 93 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASIC 149 LQ+ ID + +T E +AF I Y + Q ++ KK + I S+ ++ + Sbjct: 94 ELQNGTIDAIWNG--YTATNERKEKVAF-TIPYMENQQVLVSKKSQNIHSIQDMADKVLG 150 Query: 150 VQAGTTTELTL 160 QAG++ L Sbjct: 151 AQAGSSGYLNF 161 >gi|297565168|ref|YP_003684140.1| family 3 extracellular solute-binding protein [Meiothermus silvanus DSM 9946] gi|296849617|gb|ADH62632.1| extracellular solute-binding protein family 3 [Meiothermus silvanus DSM 9946] Length = 247 Score = 43.1 bits (100), Expect = 0.060, Method: Compositional matrix adjust. Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 10/167 (5%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 ++L L+ L S + S L K G L G + F + + GFDVD A+ Sbjct: 6 AVLALVGLLGASSTLAQSCLASAKANG-LTVGTSPDYPPFESLDKDNKIIGFDVDLINAI 64 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + K+ + + AL SK+ID+++ T R+ S+ RP Y G Sbjct: 65 AGEL---GLKVSVIGQSFDGLIPALLSKKIDVIAAGLTITEERKKSVDFT-RP--YISGP 118 Query: 128 GFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 I+ +K+ GIS + L+G + VQ G+ E +A K +K + Sbjct: 119 NVIITRKETSGISKLEDLAGKKVAVQIGSAQE-KIASGVKGAQVKSY 164 >gi|73540163|ref|YP_294683.1| extracellular solute-binding protein [Ralstonia eutropha JMP134] gi|72117576|gb|AAZ59839.1| extracellular solute-binding protein, family 3 [Ralstonia eutropha JMP134] Length = 299 Score = 43.1 bits (100), Expect = 0.060, Method: Compositional matrix adjust. Identities = 49/242 (20%), Positives = 96/242 (39%), Gaps = 9/242 (3%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKK---RGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 S++ LF S + G +KK G + G+ + F G+ D Sbjct: 6 LASLMMAAGLFCGSAQAAEQLTGTLKKIKDTGVITLGVRDSSIPFNYNLGGVRQVGYSYD 65 Query: 63 FCRALSSAIFDD---PS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 + AI D P+ +++ +P+ ++ R LQ+ IDI +T L R+ + +F Sbjct: 66 INMKIVEAIKDQLKMPNLQVKEIPITSQNRITLLQNGTIDIECGSTTNNLERQKQV--SF 123 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + G ++ K GI + L G ++ AGTT+E L + + I + Sbjct: 124 TDSIFIIGTRIMVKKDGGIKDWADLKGKNVVTTAGTTSERLLRKMNDDQKLGMNIISTKD 183 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + + R A+ D + LY + P++ +++ S+ I + D ++ Sbjct: 184 HGQSFLTLESGRAVAFMMDDALLYGERAKAKNPADWIVVGKPQSREAYGCMIRKDDPQFK 243 Query: 239 NI 240 + Sbjct: 244 KV 245 >gi|283852824|ref|ZP_06370087.1| extracellular solute-binding protein family 3 [Desulfovibrio sp. FW1012B] gi|283571816|gb|EFC19813.1| extracellular solute-binding protein family 3 [Desulfovibrio sp. FW1012B] Length = 270 Score = 43.1 bits (100), Expect = 0.061, Method: Compositional matrix adjust. Identities = 55/238 (23%), Positives = 97/238 (40%), Gaps = 16/238 (6%) Query: 7 VSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 +++ C + T F S L I +RG L G+ F V G+ GFDVD R Sbjct: 15 LTMCCGTSVAVTPFDVYEGSNLRKIVQRGTLVVGMELKFWPFEYVDEQGNPVGFDVDIAR 74 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 L+ + K++ + AL + +ID++ TL R S + F + Sbjct: 75 TLAERL---GVKLEIKDMEWTGLIPALTAGKIDLIISGITGTLERGKS--ITFTSPYFTT 129 Query: 126 GQGFIMHKKKG--ISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 G ++ +K ++ + L G I V+ GTT +L F + + V+E Sbjct: 130 GLCALLSAQKAGDVTDAAALDAPGRIIAVKTGTTADLVATKRFPKATINRYSDETACVQE 189 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + A R DA+ D ++ N ++ ++ P + P A+ +GD +W+ Sbjct: 190 VVAG----RVDAFFYDQISIGKHHRQNPETTKALLTP--FTYEPFCIALQKGDFDWWQ 241 >gi|170759814|ref|YP_001785787.1| polar amino acid ABC transporter amino acid-binding protein [Clostridium botulinum A3 str. Loch Maree] gi|169406803|gb|ACA55214.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum A3 str. Loch Maree] Length = 267 Score = 43.1 bits (100), Expect = 0.061, Method: Compositional matrix adjust. Identities = 39/164 (23%), Positives = 77/164 (46%), Gaps = 13/164 (7%) Query: 3 KDFFVSILCLIILFFTSFSTNASI----LGDIKKRGFLKCGINTGL--VGFAEVKANGDW 56 K+ SIL + ++F + N S L DIK +G G++ +GF K G+ Sbjct: 4 KNILFSILIMGLIFMLTGCDNKSKEDTSLKDIKAKGEFVVGLDDSFPPMGFKNDK--GEI 61 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFD+D + ++ + K+ + P+ L+L +K ID++ T R+ + Sbjct: 62 VGFDIDLAKEVAEKM---GVKVVFKPVQWDGVVLSLNNKDIDVIWNGLTITEKRKEQINF 118 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 + +P + Q +++ I S L+ ++ +Q G+++E+ L Sbjct: 119 S-KPYVE-NKQIIVVNNDSNIKSKKDLNKKTVAIQLGSSSEVAL 160 >gi|197295420|ref|YP_002153961.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315] gi|195944899|emb|CAR57508.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315] Length = 268 Score = 43.1 bits (100), Expect = 0.063, Method: Compositional matrix adjust. Identities = 35/146 (23%), Positives = 64/146 (43%), Gaps = 9/146 (6%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L I K G L+ + F V + +G+D+D L+ A+ K++ +P+N+ Sbjct: 36 LDTIAKNGTLRVAVPEDYPPFGSVGTDMQPQGYDIDMAGLLAKALG---VKLKLVPVNSA 92 Query: 87 ERFLALQSKQIDILSRNTDWTLLRE--ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 R L + ++D++ + T RE I A+ P YF QG +S+ + L+ Sbjct: 93 NRIPYLTTNKVDMVISSLGKTPEREKVIDFSSAYAP--YF--QGVFGPSDVKVSAPADLT 148 Query: 145 GASICVQAGTTTELTLADYFKAHNMK 170 G ++ G E+ L+ +K Sbjct: 149 GKTVGATRGALEEIALSQLAPNATIK 174 >gi|330970137|gb|EGH70203.1| glutamine ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. aceris str. M302273PT] Length = 277 Score = 43.1 bits (100), Expect = 0.064, Method: Compositional matrix adjust. Identities = 51/240 (21%), Positives = 101/240 (42%), Gaps = 23/240 (9%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGF-AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 +A L D+ + L CG+ + F A + G DVD C+AL+ + +++ Sbjct: 20 VHADQLSDVMSKKSLSCGVYADVPPFSAPDPETRELVGMDVDLCKALAKHMG---VELEL 76 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 PL+ + R ++ ++D++ N +T R + + F Y + ++ Sbjct: 77 KPLSVEARIPEVKMGRVDVIFANLAYTKSR--AEQIQFSDPYYIAKETLVVRAANADQPK 134 Query: 141 SQLSGASICVQAGTTTE--LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 S G I G+T+E + LAD P+ F ++ +AY A + + G + Sbjct: 135 SFFKGKRISSTKGSTSEQSIRLAD--------ATPVTF---QDTGSAYMALQQNKVVGLV 183 Query: 199 S-ALYALKLTNDRPS---EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 + + A+KL + E I + ++ P+ + QG+ + V+ + M A E+ Sbjct: 184 TNTMTAIKLVGQAKAGGVELAIAKEPMALEPIGAGMRQGEPAFLAKVNESLREMEAAGEI 243 >gi|168177792|ref|ZP_02612456.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum NCTC 2916] gi|226947682|ref|YP_002802773.1| polar amino acid uptake ABC transporter amino acid-binding protein [Clostridium botulinum A2 str. Kyoto] gi|182670634|gb|EDT82608.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum NCTC 2916] gi|226841993|gb|ACO84659.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum A2 str. Kyoto] Length = 267 Score = 43.1 bits (100), Expect = 0.064, Method: Compositional matrix adjust. Identities = 39/164 (23%), Positives = 77/164 (46%), Gaps = 13/164 (7%) Query: 3 KDFFVSILCLIILFFTSFSTNASI----LGDIKKRGFLKCGINTGL--VGFAEVKANGDW 56 K+ SIL + ++F + N S L DIK +G G++ +GF K G+ Sbjct: 4 KNILFSILIMGLIFMLTGCDNKSKEDTSLKDIKAKGEFVVGLDDSFPPMGFKNDK--GEI 61 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFD+D + ++ + K+ + P+ L+L +K ID++ T R+ + Sbjct: 62 VGFDIDLAKEVAKKM---GVKVVFKPVQWDGVVLSLNNKDIDVIWNGLTITEKRKEQINF 118 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 + +P + Q +++ I S L+ ++ +Q G+++E+ L Sbjct: 119 S-KPYVE-NKQIIVVNNDSNIKSKKDLNKKTVAIQLGSSSEVAL 160 >gi|118431638|ref|NP_148244.2| ABC transporter, substrate binding protein [Aeropyrum pernix K1] gi|116062962|dbj|BAA80898.2| ABC transporter, substrate binding protein [Aeropyrum pernix K1] Length = 283 Score = 43.1 bits (100), Expect = 0.064, Method: Compositional matrix adjust. Identities = 40/178 (22%), Positives = 78/178 (43%), Gaps = 14/178 (7%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 S +L +IK+RG LK G + + + G + G D++ + ++ + +++ Sbjct: 42 SVGYGLLDNIKERGVLKVGTSADWPPYEYIDPQGGYAGIDIELAKKIADGL---GVQLEI 98 Query: 81 LPLNAKERFLALQSKQIDILSRNTDW--TLLREISLGLAFRPITYFDGQGFIMHKK--KG 136 + + F A+QS ++DI+ + L + + +R T G+ I+ + G Sbjct: 99 VDMKFAALFQAVQSGKVDIVIADVAMKPERLEAVDFTIPYRCET---GKAIIVKAEDASG 155 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV-EEIDAAYRAHRCDA 193 + L+G I VQ+ T E YF K + ++RV E+ A + + DA Sbjct: 156 YTGFDWLAGKKIGVQSATVEEELANKYF---GDKAEIVTYDRVYPEMTIALKTGKIDA 210 >gi|254246322|ref|ZP_04939643.1| Extracellular solute-binding protein, family 12 [Burkholderia cenocepacia PC184] gi|124871098|gb|EAY62814.1| Extracellular solute-binding protein, family 12 [Burkholderia cenocepacia PC184] Length = 300 Score = 43.1 bits (100), Expect = 0.065, Method: Compositional matrix adjust. Identities = 45/219 (20%), Positives = 89/219 (40%), Gaps = 6/219 (2%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQYLP 82 L IK G + G + F+ N G+ +F + A+ + P+ +++ +P Sbjct: 31 LKKIKDTGVIALGHRESSIPFSYYDQNQQVVGYSREFQLKIVDAVKKKLNLPNLQVKNIP 90 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R +Q+ +DI +T L R+ AF + G + K G+ + Sbjct: 91 VTSQNRIPLVQNGTVDIECGSTTNNLERQQQA--AFSDTIFVIGTRLMTKKDSGVKDFAD 148 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G ++ AGTT+E L + + I + + + R A+ D + L Sbjct: 149 LKGKTVVTTAGTTSERLLRKMNNDKQLGMNIISAKDHGDSFNTLESGRAVAFMMDDALLA 208 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + +P E VI+ S+ + +GD ++ +V Sbjct: 209 GERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDADFKKVV 247 >gi|91787876|ref|YP_548828.1| extracellular solute-binding protein [Polaromonas sp. JS666] gi|91697101|gb|ABE43930.1| amino acid ABC transporter substrate-binding protein, PAAT family [Polaromonas sp. JS666] Length = 294 Score = 43.1 bits (100), Expect = 0.066, Method: Compositional matrix adjust. Identities = 40/192 (20%), Positives = 77/192 (40%), Gaps = 10/192 (5%) Query: 61 VDFCRALSSAIFDDPSK--------IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 V F L+ AI DD K + Y+P+ ++ R L + D+ +T R Sbjct: 55 VGFSVELTEAIIDDVRKKVKKPNLEVAYMPVTSQNRIPLLVNGTYDLECGSTTNNSAR-- 112 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 +AF ++ G + K G+ + + L+ ++ GTT + Y N+ Sbjct: 113 GKDVAFSINMFYTGTRLLTKKTSGVKNYADLTKKTVASTTGTTNAQVIRKYNTEKNLDMQ 172 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 I+ + ++ + R A+ D L+ L + P+ ++ D + P A + + Sbjct: 173 LILGKDHDDSLLLVESDRAMAFAMDDILLFGLMANSKNPAALQVVGDSLQVEPYACMLRK 232 Query: 233 GDTEWYNIVSWT 244 D E+ +V T Sbjct: 233 DDPEFKKLVDGT 244 >gi|161524852|ref|YP_001579864.1| extracellular solute-binding protein [Burkholderia multivorans ATCC 17616] gi|189350398|ref|YP_001946026.1| polar amino acid transporter substrate-binding protein [Burkholderia multivorans ATCC 17616] gi|160342281|gb|ABX15367.1| extracellular solute-binding protein family 3 [Burkholderia multivorans ATCC 17616] gi|189334420|dbj|BAG43490.1| polar amino acid transport system substrate-binding protein [Burkholderia multivorans ATCC 17616] Length = 264 Score = 43.1 bits (100), Expect = 0.066, Method: Compositional matrix adjust. Identities = 41/174 (23%), Positives = 73/174 (41%), Gaps = 12/174 (6%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 +L +K+RG L+ G+ F A G+ GFDVD +A+++ + P +++ Sbjct: 29 LLDQVKQRGTLRIGLEGTFPPFNSKNAQGELVGFDVDIAKAVAAKLGVKP---EFVTTEW 85 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQL 143 LQ+ + D++ T R+ +L F P + I K + S+ L Sbjct: 86 SGIIAGLQAGKFDVIVNQVGITDKRKETLD--FSPAYTYSSAQLIQRKDDTRQFKSLEDL 143 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 G + V GT + +A ++K +P E + ++ A R DA D Sbjct: 144 KGKKLGVALGTNY-MDMAKSVPGIDVKTYPGAPEYLRDLAAG----RLDAALND 192 >gi|241196118|ref|YP_002969673.1| amino acid ABC transporter periplasmic protein [Bifidobacterium animalis subsp. lactis DSM 10140] gi|240250672|gb|ACS47611.1| ABC-type amino acid transport system periplasmic component [Bifidobacterium animalis subsp. lactis DSM 10140] Length = 279 Score = 43.1 bits (100), Expect = 0.067, Method: Compositional matrix adjust. Identities = 35/159 (22%), Positives = 75/159 (47%), Gaps = 7/159 (4%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 ++++C F + +S KK ++ GI G K +G ++GFDVD R Sbjct: 14 IAMVCAASALFGMAACGSSSADGEKK---IRIGIKYDQPGLG-FKKSGTFEGFDVDVARY 69 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 +++ + ++I++L +K+R LQ+ +D++ + T R+ + ++F + G Sbjct: 70 VANQLGYTDAEIEFLEAPSKQREAMLQNGDVDMILATSSITDERKKA--VSFAGPYFVAG 127 Query: 127 QGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYF 164 Q ++ I+ L+G +C G+T+ + + F Sbjct: 128 QDLMVRADDHSINGPEDLNGKRLCSVTGSTSAKVVKERF 166 >gi|329934517|ref|ZP_08284558.1| sugar-binding protein [Streptomyces griseoaurantiacus M045] gi|329305339|gb|EGG49195.1| sugar-binding protein [Streptomyces griseoaurantiacus M045] Length = 337 Score = 43.1 bits (100), Expect = 0.068, Method: Compositional matrix adjust. Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 9/113 (7%) Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL--L 109 + + +GFD+D R ++ I DP + + + +R A++S ++D++ R T L Sbjct: 110 GSSELEGFDIDLARRIAREILGDPDAVVFRAIPTNQRTEAIRSGRVDMVVRTMTITCDRL 169 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTT--TELT 159 R++ AF + GQ + +K I+ L+ +C G+T T+LT Sbjct: 170 RQV----AFSAPYFRTGQQVLAPRKSDITGYDDTLAHKRVCSATGSTALTQLT 218 >gi|134295624|ref|YP_001119359.1| extracellular solute-binding protein [Burkholderia vietnamiensis G4] gi|134138781|gb|ABO54524.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia vietnamiensis G4] Length = 264 Score = 43.1 bits (100), Expect = 0.068, Method: Compositional matrix adjust. Identities = 40/174 (22%), Positives = 74/174 (42%), Gaps = 12/174 (6%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 +L ++K+RG L+ G+ F G+ GFDVD +A+++ + K +++ Sbjct: 29 LLDEVKQRGTLRVGLEGTFPPFNSKSPQGELVGFDVDIAKAVAAKLG---VKAEFVTTEW 85 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQL 143 LQ+ + D+++ T R+ +L F P + I K + S+ L Sbjct: 86 SGIIAGLQAGKFDVIANQVGITDKRKETLD--FSPAYTYSSAQLIQRKDDTRQFKSLEDL 143 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 G + V GT + +A ++K +P E + ++ A R DA D Sbjct: 144 KGKKLGVALGTNY-MDMAKSVPGIDVKTYPGAPEYLRDLAAG----RLDAALND 192 >gi|237808726|ref|YP_002893166.1| extracellular solute-binding protein family 3 [Tolumonas auensis DSM 9187] gi|237500987|gb|ACQ93580.1| extracellular solute-binding protein family 3 [Tolumonas auensis DSM 9187] Length = 259 Score = 43.1 bits (100), Expect = 0.068, Method: Compositional matrix adjust. Identities = 51/223 (22%), Positives = 96/223 (43%), Gaps = 18/223 (8%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 A L DI+++G LK + F V A+ G+D+D L+ + K++ +P+ Sbjct: 23 ADQLDDIQQKGVLKVAVPQDFPPFGSVGADMQPYGYDIDMAGYLAQKLN---VKLELVPV 79 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLRE--ISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 + R LQ+K++D++ + RE I A+ P +F G + + + Sbjct: 80 TSANRIPYLQTKKVDLVISSLGKNPEREKVIDFSNAYAP--FF--LGVFGAESVALKTSD 135 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY-TGDIS- 199 +L+ +I V G ++ L+ A FE +AY + + D TG++ Sbjct: 136 ELADKTIGVTRGAVEDMELSKIAPASTTVKR---FEDNNTTLSAYLSGQIDLIATGNVVI 192 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A A ++ + +P+ +L SP I +G+T V+ Sbjct: 193 AEIASRMPDRKPATKFML----KNSPCFIGIYKGETRLQQKVN 231 >gi|187777536|ref|ZP_02994009.1| hypothetical protein CLOSPO_01127 [Clostridium sporogenes ATCC 15579] gi|187774464|gb|EDU38266.1| hypothetical protein CLOSPO_01127 [Clostridium sporogenes ATCC 15579] Length = 267 Score = 43.1 bits (100), Expect = 0.069, Method: Compositional matrix adjust. Identities = 39/164 (23%), Positives = 77/164 (46%), Gaps = 13/164 (7%) Query: 3 KDFFVSILCLIILFFTSFSTNASI----LGDIKKRGFLKCGINTGL--VGFAEVKANGDW 56 K+ SIL + ++F + N S L DIK +G G++ +GF K G+ Sbjct: 4 KNILFSILIMGLIFMLTGCGNKSKEDTSLKDIKDKGEFVVGLDDSFPPMGFKNDK--GEI 61 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFD+D + ++ + K+ + P+ L+L +K ID++ T R+ + Sbjct: 62 VGFDIDLAKEVAKKM---GVKVVFKPVQWDGVVLSLNNKDIDVIWNGLTITEKRKEQINF 118 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 + +P + Q +++ I S L+ ++ +Q G+++E+ L Sbjct: 119 S-KPYVE-NKQIIVVYNDSNIKSKKDLNKKTVAIQLGSSSEVAL 160 >gi|167034163|ref|YP_001669394.1| extracellular solute-binding protein [Pseudomonas putida GB-1] gi|166860651|gb|ABY99058.1| extracellular solute-binding protein family 3 [Pseudomonas putida GB-1] Length = 279 Score = 43.1 bits (100), Expect = 0.069, Method: Compositional matrix adjust. Identities = 46/203 (22%), Positives = 80/203 (39%), Gaps = 11/203 (5%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDV 61 + S+L + + + + L +++R L G+ F + A + GF V Sbjct: 9 RGLLASLLATTTVAASGLAQADATLDKVQQRHKLAVGVVLSGGPFGAIDPATREPIGFSV 68 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D R L+ + + P N R LQ ++D+L N +WT R+ LG P Sbjct: 69 DLARDLARQLGVAVDLVAVQPAN---RVQFLQQGKVDLLIANMEWTPERDKLLGHVPTPF 125 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y G + K I++ + L G +C G++ L + ++K F+ E Sbjct: 126 -YRVGGTAALAKDSPINTWAGLKGQPVCTSQGSSYTQALVEL--GADIK----AFKTSAE 178 Query: 182 IDAAYRAHRCDAYTGDISALYAL 204 A R + C A D + + L Sbjct: 179 SLLALRGNNCVAAVHDATLINPL 201 >gi|254555899|ref|YP_003062316.1| glutamine ABC transporter, substrate binding protein [Lactobacillus plantarum JDM1] gi|300767693|ref|ZP_07077603.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308179876|ref|YP_003924004.1| glutamine ABC transporter, substrate binding protein [Lactobacillus plantarum subsp. plantarum ST-III] gi|254044826|gb|ACT61619.1| glutamine ABC transporter, substrate binding protein [Lactobacillus plantarum JDM1] gi|300494678|gb|EFK29836.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308045367|gb|ADN97910.1| glutamine ABC transporter, substrate binding protein [Lactobacillus plantarum subsp. plantarum ST-III] Length = 278 Score = 42.7 bits (99), Expect = 0.069, Method: Compositional matrix adjust. Identities = 55/235 (23%), Positives = 100/235 (42%), Gaps = 17/235 (7%) Query: 7 VSILCLIILFFTSFSTNAS-----ILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGF 59 + +L ++++ T+ + S +L + K + G+ +T L G +VK N KGF Sbjct: 11 LGMLAMLVVVLTACGSRQSLAKQDVLTNDKASKTITWGVKADTKLFGLMDVKDN-QIKGF 69 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D D AL+ + + +++ + ++ R L++ ID + T RE + Sbjct: 70 DADIATALTKRVLGKNATAKFVQVTSQTRIPLLKNGNIDAIIATMTITPEREKQVDFTN- 128 Query: 120 PITYFD-GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 +YFD GQ ++ K I SV L+ + V G T ++ + KA K + Sbjct: 129 --SYFDAGQSLLVKKGSAIKSVKDLNKSGTKV-LGVTGANSVENIKKAAP-KAKVLELSD 184 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + A ++ + A T D LY + N P V+ +K P A+ +G Sbjct: 185 YAQAMTALKSGQGVALTTDNGILYGMASQN--PGYEVV-GGTFTKEPYGIAVNKG 236 >gi|238853885|ref|ZP_04644248.1| glutamine-binding protein [Lactobacillus gasseri 202-4] gi|311111030|ref|ZP_07712427.1| glutamine-binding protein [Lactobacillus gasseri MV-22] gi|238833471|gb|EEQ25745.1| glutamine-binding protein [Lactobacillus gasseri 202-4] gi|311066184|gb|EFQ46524.1| glutamine-binding protein [Lactobacillus gasseri MV-22] Length = 274 Score = 42.7 bits (99), Expect = 0.069, Method: Compositional matrix adjust. Identities = 43/197 (21%), Positives = 80/197 (40%), Gaps = 10/197 (5%) Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 +T L G +K G +GF+VD +AL+ + +K +++ K R L++ ID + Sbjct: 49 DTRLFGLMSIKT-GKIEGFEVDLAKALTKQMLGKNAKTEFVQTTPKTRIPLLKNGNIDAI 107 Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 T R+ + F + GQ ++ I +V L+G + GTT Sbjct: 108 LATMTITPDRKKQ--VTFSEPYFTAGQSLLVKDNSTIKNVKDLNGKTALAVKGTTA---- 161 Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220 D K K + ++ + A +A + A T D L + N + ++ Sbjct: 162 VDNVKKFAPKAKVLEYDDYGQAFTALKAGQGQAMTTDNGLLAGIASEN---KGYKLVGGT 218 Query: 221 ISKSPLAPAIIQGDTEW 237 + P A+ +G T++ Sbjct: 219 YTSEPYGIAVEKGQTDF 235 >gi|301801564|emb|CBW34258.1| putative periplasmic solute-binding transport protein (pseudogene) [Streptococcus pneumoniae INV200] Length = 254 Score = 42.7 bits (99), Expect = 0.071, Method: Compositional matrix adjust. Identities = 47/190 (24%), Positives = 87/190 (45%), Gaps = 23/190 (12%) Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR--EISLGL 116 +D++ L+ D K++Y+ ++A R L S ++DI N T R ++ L Sbjct: 43 YDIELGNQLAQ---DLGVKVKYISVDAANRAEYLISNKVDITLANFTVTDERKKQVDFAL 99 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP-IV 175 + ++ G + K I+ V QL G ++ V GTT E YF+ K HP I Sbjct: 100 PYMKVSL----GVVSPKTGLITDVKQLEGKTLIVTKGTTAET----YFE----KNHPEIK 147 Query: 176 FERVEEIDAAYRA---HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 ++ ++ +Y+A R DA++ D + + A L N V + + +A A+ + Sbjct: 148 LQKYDQYSDSYQALLDGRGDAFSTDNTEVLAWALEN--KGFEVGITSLGDPDTIAAAVQK 205 Query: 233 GDTEWYNIVS 242 G+ E + ++ Sbjct: 206 GNQELLDFIN 215 >gi|241765003|ref|ZP_04762999.1| extracellular solute-binding protein family 3 [Acidovorax delafieldii 2AN] gi|241365400|gb|EER60193.1| extracellular solute-binding protein family 3 [Acidovorax delafieldii 2AN] Length = 298 Score = 42.7 bits (99), Expect = 0.071, Method: Compositional matrix adjust. Identities = 49/223 (21%), Positives = 93/223 (41%), Gaps = 15/223 (6%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK--------I 78 L IK G + G+ G A NG + GF + + I DD K + Sbjct: 26 LAKIKSSGSVTLGVRES-SGLAYTLGNGKYVGFHTE----MGERILDDIQKQLGLAKLDV 80 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 +Y P+ ++ R + + +D+ +T R+ + AF TY + + GI Sbjct: 81 KYQPVTSQNRVPLVTNGTVDLECGSTTNNAARQKDV--AFAVTTYVEEVRIAVKASSGIH 138 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 S+ L+G ++ GTT+ TL + +A + + ++ + + R DA+ D Sbjct: 139 SIKDLNGKTVATTTGTTSVQTLRKHERAGGIDFKEVLGKDHADSFLLLETGRADAFVMDG 198 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 S L P+++ I+ +++S P+A + + D + V Sbjct: 199 SILAGNISKAKNPADYKIVGEVLSVEPIACMMRKDDPAFKKAV 241 >gi|237793772|ref|YP_002861324.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum Ba4 str. 657] gi|229262805|gb|ACQ53838.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum Ba4 str. 657] Length = 267 Score = 42.7 bits (99), Expect = 0.071, Method: Compositional matrix adjust. Identities = 39/164 (23%), Positives = 77/164 (46%), Gaps = 13/164 (7%) Query: 3 KDFFVSILCLIILFFTSFSTNASI----LGDIKKRGFLKCGINTGL--VGFAEVKANGDW 56 K+ SIL + ++F + N S L DIK +G G++ +GF K G+ Sbjct: 4 KNILFSILIMGLIFILTGCDNKSKEDTSLKDIKAKGEFVVGLDDSFPPMGFKNDK--GEI 61 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFD+D + ++ + K+ + P+ L+L +K ID++ T R+ + Sbjct: 62 VGFDIDLAKEVAKKM---GVKVVFKPVQWDGVVLSLNNKDIDVIWNGLTITEKRKEQINF 118 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 + +P + Q +++ I S L+ ++ +Q G+++E+ L Sbjct: 119 S-KPYVE-NKQIIVVNNDSNIKSKKDLNKKTVAIQLGSSSEVAL 160 >gi|219683680|ref|YP_002470063.1| glutamate-binding protein of ABC transporter system [Bifidobacterium animalis subsp. lactis AD011] gi|219621330|gb|ACL29487.1| glutamate-binding protein of ABC transporter system [Bifidobacterium animalis subsp. lactis AD011] Length = 271 Score = 42.7 bits (99), Expect = 0.071, Method: Compositional matrix adjust. Identities = 34/159 (21%), Positives = 74/159 (46%), Gaps = 7/159 (4%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 ++++C F + +S KK ++ GI G K +G ++GFDVD R Sbjct: 6 IAMVCAASALFGMAACGSSSADGEKK---IRIGIKYDQPGLG-FKKSGTFEGFDVDVARY 61 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 +++ + ++I++L +K+R LQ+ +D++ +++ E ++F + G Sbjct: 62 VANQLGYTDAEIEFLEAPSKQREAMLQNGDVDMILAT--YSITDERKKAVSFAGPYFVAG 119 Query: 127 QGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYF 164 Q ++ I+ L+G +C G+T+ + + F Sbjct: 120 QDLMVRADDHSINGPEDLNGKRLCSVTGSTSAKVVKERF 158 >gi|295096601|emb|CBK85691.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 316 Score = 42.7 bits (99), Expect = 0.072, Method: Compositional matrix adjust. Identities = 49/233 (21%), Positives = 89/233 (38%), Gaps = 6/233 (2%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQY 80 S L I K G + G V F+ G+ D+ A+ A+ + P +++ Sbjct: 45 STLDKIAKNGVIVVGHRESSVPFSYYDNTQKVVGYSQDYSNAIVEAVKKKLNKPDLQVKL 104 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +P+ ++ R LQ+ D +T L R+ AF + G + K I Sbjct: 105 IPITSQNRIPLLQNGTFDFECGSTTNNLERQKQA--AFSDTIFVVGTRLLTKKGGDIKDF 162 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + L G ++ V +GTT+E+ L M I + + + R A+ D + Sbjct: 163 ADLKGKAVVVTSGTTSEVLLHKLNDEKKMDMRIISAKDHGDSFRTLESGRAVAFMMDDAL 222 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 L + +P I+ SK + +GD ++ ++ T T+ E Sbjct: 223 LAGERAKAKKPDNWEIVGTAQSKEAYGCMLRKGDEDFKKLIDDTIAQAQTSGE 275 >gi|167586688|ref|ZP_02379076.1| extracellular solute-binding protein, family 3 [Burkholderia ubonensis Bu] Length = 302 Score = 42.7 bits (99), Expect = 0.072, Method: Compositional matrix adjust. Identities = 42/198 (21%), Positives = 77/198 (38%), Gaps = 6/198 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQ 79 A L I++ + G V F+ V A+G GF D C + +A+ K ++ Sbjct: 30 AGTLAKIQQSNVIAIGHRETSVPFSYVDASGKVIGFSQDLCDRVIAAVRARTGKPDLQVR 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 ++P+ ++ R +Q+ +D+ T R +AF + + GI Sbjct: 90 FIPVTSQNRMPLVQNGTVDLECGVTTNLAARHAQ--VAFSTTFFVATTRLLTRTTSGIRD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L+G ++ GTT+E L + M I + E + R AY D Sbjct: 148 FPDLAGKTVVTNQGTTSERLLRRMNEEKKMNMQIISAKDYGEGRLTLESGRAVAYMMDDV 207 Query: 200 ALYALKLTNDRPSEHVIL 217 L ++ +P++ I+ Sbjct: 208 LLAGVRQLAAKPADWTIV 225 >gi|167586129|ref|ZP_02378517.1| extracellular solute-binding protein, family 3 [Burkholderia ubonensis Bu] Length = 297 Score = 42.7 bits (99), Expect = 0.072, Method: Compositional matrix adjust. Identities = 46/219 (21%), Positives = 88/219 (40%), Gaps = 6/219 (2%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQYLP 82 L IK G + G + F+ N G+ DF + A+ + P+ +++ +P Sbjct: 28 LKKIKDTGVIALGHRESSIPFSYYDQNQQVVGYSRDFQLKVVDAVKKKLNLPNLQVKNIP 87 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R +Q+ +DI +T R+ AF + G + K GI + Sbjct: 88 VTSQNRIPLVQNGTVDIECGSTTNNTERQQQA--AFSDTIFVIGTRLMTKKDSGIKDFAD 145 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G ++ AGTT+E L + + I + + + R A+ D + L Sbjct: 146 LKGKTVVTTAGTTSERLLRKMNNDKQLGMNIISAKDHGDSFNTLESGRAVAFMMDDALLA 205 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + +P E VI+ S+ + +GD ++ +V Sbjct: 206 GERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDADFKKVV 244 >gi|28377714|ref|NP_784606.1| glutamine ABC transporter, substrate binding protein [Lactobacillus plantarum WCFS1] gi|28270547|emb|CAD63451.1| glutamine ABC transporter, substrate binding protein [Lactobacillus plantarum WCFS1] Length = 278 Score = 42.7 bits (99), Expect = 0.073, Method: Compositional matrix adjust. Identities = 55/235 (23%), Positives = 100/235 (42%), Gaps = 17/235 (7%) Query: 7 VSILCLIILFFTSFSTNAS-----ILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGF 59 + +L ++++ T+ + S +L + K + G+ +T L G +VK N KGF Sbjct: 11 LGMLAMLVVVLTACGSRQSLAKQDVLTNDKASKTITWGVKADTKLFGLMDVKDN-QIKGF 69 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D D AL+ + + +++ + ++ R L++ ID + T RE + Sbjct: 70 DADIATALTKRVLGKNATAKFVQVTSQTRIPLLKNGNIDAILATMTITPEREKQVDFTN- 128 Query: 120 PITYFD-GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 +YFD GQ ++ K I SV L+ + V G T ++ + KA K + Sbjct: 129 --SYFDAGQSLLVKKGSAIKSVKDLNKSGTKV-LGVTGANSVENIKKAAP-KAKVLELSD 184 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + A ++ + A T D LY + N P V+ +K P A+ +G Sbjct: 185 YAQAMTALKSGQGVALTTDNGILYGMASQN--PGYEVV-GGTFTKEPYGIAVNKG 236 >gi|116629192|ref|YP_814364.1| amino acid ABC transporter periplasmic protein [Lactobacillus gasseri ATCC 33323] gi|116094774|gb|ABJ59926.1| amino acid ABC transporter substrate-binding protein, PAAT family [Lactobacillus gasseri ATCC 33323] Length = 277 Score = 42.7 bits (99), Expect = 0.074, Method: Compositional matrix adjust. Identities = 43/197 (21%), Positives = 80/197 (40%), Gaps = 10/197 (5%) Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 +T L G +K G +GF+VD +AL+ + +K +++ K R L++ ID + Sbjct: 52 DTRLFGLMSIKT-GKIEGFEVDLAKALTKQMLGKNAKTEFVQTTPKTRIPLLKNGNIDAI 110 Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 T R+ + F + GQ ++ I +V L+G + GTT Sbjct: 111 LATMTITPDRKKQ--VTFSEPYFTAGQSLLVKDNSTIKNVKDLNGKTALAVKGTTA---- 164 Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220 D K K + ++ + A +A + A T D L + N + ++ Sbjct: 165 VDNVKKFAPKAKVLEYDDYGQAFTALKAGQGQAMTTDNGLLAGIASEN---KGYKLVGGT 221 Query: 221 ISKSPLAPAIIQGDTEW 237 + P A+ +G T++ Sbjct: 222 YTSEPYGIAVEKGQTDF 238 >gi|169334519|ref|ZP_02861712.1| hypothetical protein ANASTE_00922 [Anaerofustis stercorihominis DSM 17244] gi|169259236|gb|EDS73202.1| hypothetical protein ANASTE_00922 [Anaerofustis stercorihominis DSM 17244] Length = 278 Score = 42.7 bits (99), Expect = 0.076, Method: Compositional matrix adjust. Identities = 45/184 (24%), Positives = 80/184 (43%), Gaps = 15/184 (8%) Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 V NG GFD++F +A+ + K++++ + F L + + D++ + Sbjct: 56 VDKNGKTVGFDIEFAKAIGEKM---GRKVEFVNSSWDAIFAGLDADKYDLVISSVGVNKD 112 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAH 167 R+ L L+ P Y Q I+ K G I SV +L+G + VQ TT+ T +Y+ + Sbjct: 113 RQEQLALS-NP--YLANQQVIISSKSGKQIKSVEELAGKKVGVQVSTTSNDT-CNYYLSK 168 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGD--ISALYALKLTNDRPSEHVILPDIISKSP 225 + + ++ + E A D D + Y K TN + V D ++ P Sbjct: 169 GIDFDLREYDGMTEAFVALEGGSVDCVVTDLVVGEYYVHKNTN----KFVKTCDKLTNEP 224 Query: 226 LAPA 229 +A A Sbjct: 225 IAVA 228 >gi|251799198|ref|YP_003013929.1| extracellular solute-binding protein family 3 [Paenibacillus sp. JDR-2] gi|247546824|gb|ACT03843.1| extracellular solute-binding protein family 3 [Paenibacillus sp. JDR-2] Length = 297 Score = 42.7 bits (99), Expect = 0.076, Method: Compositional matrix adjust. Identities = 51/207 (24%), Positives = 83/207 (40%), Gaps = 16/207 (7%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 S S NA G++KK + G TG + NG GFDV+ + + + I Sbjct: 51 SASGNAG--GEVKK---VVIGTGTGFPQVCFIDENGKLTGFDVELIKEIDKRLPQYEFDI 105 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 Q + + L+L++ +ID+++ + RE P ++ + + I Sbjct: 106 QTMEFS--NLLLSLETNKIDLVAHEMEKNPEREAKYLFNTEPYAHWRNKIVVPQDNNTIH 163 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR--AHRCDAYTG 196 S+ L+G + V A + L +Y K H+ K + IV++ D + R DA Sbjct: 164 SLDDLAGKKVLVGATSAQAQILENYNKDHDKKIN-IVYQNGAANDTVSQITTGRVDATLA 222 Query: 197 D------ISALYALKLTNDRPSEHVIL 217 I LK T D SE IL Sbjct: 223 ADFTLSLIDPQAKLKTTGDNLSEADIL 249 >gi|167564084|ref|ZP_02357000.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia oklahomensis EO147] Length = 297 Score = 42.7 bits (99), Expect = 0.076, Method: Compositional matrix adjust. Identities = 45/215 (20%), Positives = 88/215 (40%), Gaps = 11/215 (5%) Query: 12 LIILFFTSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 L++ ++F+ A L IK G + G + F+ + G+ DF Sbjct: 8 LMVAALSTFAGGAIAQETGTLKKIKDTGVIALGHRESSIPFSYYDQSQQVVGYSRDFQMK 67 Query: 67 LSSAI---FDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + A+ + P+ +++ +P+ ++ R +Q+ +DI +T L R+ AF Sbjct: 68 VVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLDRQKQA--AFSNTI 125 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 + G + K G+ + L G ++ AGTT+E L + + M + I + + Sbjct: 126 FVIGTRLMTKKDSGVKDFADLKGKTVVTTAGTTSERLLREMNNKNQMGMNIISAKDHGDS 185 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 R A+ D + L + +P E VI+ Sbjct: 186 FQTLETGRAVAFMMDDALLAGERAKAKQPGEWVIV 220 >gi|207111016|ref|ZP_03245178.1| glutamine ABC transporter, periplasmic glutamine-binding protein (glnH) [Helicobacter pylori HPKX_438_CA4C1] Length = 71 Score = 42.7 bits (99), Expect = 0.077, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 37/65 (56%) Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F V + G ++G+DV + ++ + D +KI+++P+ A R L++ ++DI+ N Sbjct: 4 FGSVDSKGKYQGYDVVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTR 63 Query: 107 TLLRE 111 T RE Sbjct: 64 TKERE 68 >gi|186477321|ref|YP_001858791.1| extracellular solute-binding protein [Burkholderia phymatum STM815] gi|184193780|gb|ACC71745.1| extracellular solute-binding protein family 3 [Burkholderia phymatum STM815] Length = 297 Score = 42.7 bits (99), Expect = 0.079, Method: Compositional matrix adjust. Identities = 45/225 (20%), Positives = 91/225 (40%), Gaps = 6/225 (2%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS- 76 + +A L IK G + G + F+ + G+ +F + A+ + P+ Sbjct: 22 AQDAGTLKKIKDTGVISLGHRESSIPFSYYDDKQNVIGYSQEFALKVVDAVKQKLNMPNL 81 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 K++ P+ ++ R +Q+ +D+ +T R+ + +F + G + K G Sbjct: 82 KVKLTPVTSQNRIPLVQNGTVDLECGSTTNNAERQQQV--SFSNTIFVIGTRLMTKKDSG 139 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 + + L G ++ AGTT+E L + NM + I + E R A+ Sbjct: 140 VKDWADLKGKTVVTTAGTTSERLLRKMNQDKNMGMNIISAKDHGESFLTLSTGRAAAFMM 199 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 D + L + ++ P + VI+ S + + D E+ +V Sbjct: 200 DDALLAGERAKSNNPGDFVIVGAPQSHEAYGCMLRKNDPEFKKVV 244 >gi|83950196|ref|ZP_00958929.1| polar amino acid uptake family ABC transporter, periplasmic substrate-binding protein [Roseovarius nubinhibens ISM] gi|83838095|gb|EAP77391.1| polar amino acid uptake family ABC transporter, periplasmic substrate-binding protein [Roseovarius nubinhibens ISM] Length = 269 Score = 42.7 bits (99), Expect = 0.079, Method: Compositional matrix adjust. Identities = 42/188 (22%), Positives = 78/188 (41%), Gaps = 17/188 (9%) Query: 13 IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72 I+ F T+ A L +IK G + G+ + + ++G+ G ++D R ++ + Sbjct: 14 IVAFGTT--AQADQLQEIKDEGKIVVGVKQDYKPWGYLTSDGELAGLEIDLARDVAERLG 71 Query: 73 DDPSKIQYLPLNAKERFLALQSKQID-ILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131 +++ +P+ A R L +ID I++ D RE+ +G+ P Y G + Sbjct: 72 ---VEVELVPVVASNRMEFLSQGRIDLIIATMGDNPKRREV-VGM-IEPNYYAGGTNVLA 126 Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP--IVFERVEEIDAAYRAH 189 K G+ L G +C G+ Y K Y P + F + E+ +A + Sbjct: 127 PKAVGLKEWEDLRGKDVCALQGSY-------YNKRVTQLYGPNLVAFAGIPEVTSALKNG 179 Query: 190 RCDAYTGD 197 C + D Sbjct: 180 SCIGFLYD 187 >gi|259909117|ref|YP_002649473.1| glutamate and aspartate transporter subunit [Erwinia pyrifoliae Ep1/96] gi|224964739|emb|CAX56256.1| Glutamate/aspartate periplasmic-binding protein [Erwinia pyrifoliae Ep1/96] gi|283479144|emb|CAY75060.1| putative glutamate/aspartate ABC transport system, periplasmic component [Erwinia pyrifoliae DSM 12163] Length = 309 Score = 42.7 bits (99), Expect = 0.080, Method: Compositional matrix adjust. Identities = 50/231 (21%), Positives = 91/231 (39%), Gaps = 6/231 (2%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQYLP 82 L I K G + G V F+ G+ D+ A+ +AI + P +++ LP Sbjct: 40 LEKIAKSGVIVVGHRESSVPFSYYHNQQKVVGYSQDYSDAIVAAIKKKLNKPDLQVKMLP 99 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R LQ+ D +T + R+ +F + G ++ K I + Sbjct: 100 VTSQNRIPLLQNGTYDFECGSTTNNIERQKQA--SFSNSIFVVGTRLLVKKGGVIKEFAD 157 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G ++ V +GTT+E+ L M + + + + R A+ D + L Sbjct: 158 LKGKTVVVTSGTTSEILLNKLNDEQKMGIRIVSAKDHGDSFRTLESGRAVAFMMDDALLA 217 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 + +PSE IL S + +GD E+ ++ T T+ E Sbjct: 218 GERAKAKKPSEWEILGTPQSHEAYGCMLRKGDNEFKKLMDDTIVQAQTSGE 268 >gi|167571226|ref|ZP_02364100.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia oklahomensis C6786] Length = 297 Score = 42.7 bits (99), Expect = 0.080, Method: Compositional matrix adjust. Identities = 45/215 (20%), Positives = 88/215 (40%), Gaps = 11/215 (5%) Query: 12 LIILFFTSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 L++ ++F+ A L IK G + G + F+ + G+ DF Sbjct: 8 LMVAALSTFAGGAIAQETGTLKKIKDTGVIALGHRESSIPFSYYDQSQQVVGYSRDFQMK 67 Query: 67 LSSAI---FDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + A+ + P+ +++ +P+ ++ R +Q+ +DI +T L R+ AF Sbjct: 68 VVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLDRQKQA--AFSNTI 125 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 + G + K G+ + L G ++ AGTT+E L + + M + I + + Sbjct: 126 FVIGTRLMTKKDSGVKDFADLKGKTVVTTAGTTSERLLREMNNKNQMGMNIISAKDHGDS 185 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 R A+ D + L + +P E VI+ Sbjct: 186 FQTLETGRAVAFMMDDALLAGERAKAKQPGEWVIV 220 >gi|299529975|ref|ZP_07043402.1| amino-acid ABC transporter bindingprotein ybeJ precursor [Comamonas testosteroni S44] gi|298721955|gb|EFI62885.1| amino-acid ABC transporter bindingprotein ybeJ precursor [Comamonas testosteroni S44] Length = 307 Score = 42.7 bits (99), Expect = 0.081, Method: Compositional matrix adjust. Identities = 51/234 (21%), Positives = 95/234 (40%), Gaps = 8/234 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC-RALS--SAIFDDPS-KIQYLP 82 L I+ G + G+ + NG + GF V+ C +AL+ P I+Y Sbjct: 25 LDRIRDTGVVTMGVREASGTMSYTLGNGKYAGFHVELCEKALARMQQQLKLPRLDIRYQM 84 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + A+ R + + +D+ T R+ + AF P Y + + K GI+ V+Q Sbjct: 85 VTAQNRVPLVANGTVDVECGTTTNNAARQKEV--AFAPTVYMEEVRTAVRKNSGITEVAQ 142 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G ++ G T L + K + ++ ++ + E R DA D + Sbjct: 143 LKGRNVAATTGATAVTLLRRFSKEKGVDFNVLMAKDNAECFILLETGRADACVAD-GQIL 201 Query: 203 ALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 A L+ R P ++ I+ + S P+A + + E+ + M ++ E+ Sbjct: 202 ASGLSRLRDPGQYAIVGEPFSVEPIAIMLDRKSPEFKKLFDAQIRGMASSGEVA 255 >gi|150398176|ref|YP_001328643.1| extracellular solute-binding protein [Sinorhizobium medicae WSM419] gi|150029691|gb|ABR61808.1| extracellular solute-binding protein family 3 [Sinorhizobium medicae WSM419] Length = 265 Score = 42.7 bits (99), Expect = 0.081, Method: Compositional matrix adjust. Identities = 50/183 (27%), Positives = 81/183 (44%), Gaps = 12/183 (6%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 L G N G V + +A+G GF+VD ++ + ++++ F A+QS Sbjct: 29 LTVGANIGNVPWEFQEADGKIVGFEVDLVNEIAKRL---GKSVEFVNTPFNGLFPAVQSG 85 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDG-QGFIMHKKKGISSVSQLSGASICVQAGT 154 +ID+ + T R S+ A +P Y+D Q + G + + + G + V G+ Sbjct: 86 RIDMAISSITITDKRLESVSFA-QP--YYDSDQSLTVTATSGTTGLKDMEGKVVGVDTGS 142 Query: 155 TTELTLADYFKAHNMKYHPI-VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 T ++ AD KA + K+ I FE + A R D Y DI AL L D+P Sbjct: 143 TGDM-WADRNKA-DYKFGEIRRFEGLSPAMLDLVAGRVDGYISDIPAL--LYYVKDKPDL 198 Query: 214 HVI 216 V+ Sbjct: 199 KVV 201 >gi|25029144|ref|NP_739198.1| putative amino acid ABC transporter glutamin-binding protein [Corynebacterium efficiens YS-314] gi|23494431|dbj|BAC19398.1| putative amino acid ABC transporter glutamin-binding protein [Corynebacterium efficiens YS-314] Length = 368 Score = 42.7 bits (99), Expect = 0.081, Method: Compositional matrix adjust. Identities = 31/132 (23%), Positives = 60/132 (45%), Gaps = 11/132 (8%) Query: 29 DIKKRGFLKCGINTG--LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 +I +RG L G++ L+ F + +G +GF+V + ++ IF +P + + + A Sbjct: 106 EIFQRGRLIVGVDQSKNLLSFRD-PVSGQLRGFEVQLAKEIARDIFGNPEAVDFRFIEAG 164 Query: 87 ERFLALQSKQIDILSRNTDWT--LLREISLGLAFRPITYFDGQG-FIMHKKKGISSVSQL 143 + L +D++ R+ T LR + Y Q ++ GI + L Sbjct: 165 DSLRGLSRGDVDMVIRSVSVTEDRLRRMEFS-----TPYMRTQTRLLVMDNSGIQGIEDL 219 Query: 144 SGASICVQAGTT 155 +G ++CV G+T Sbjct: 220 AGNTVCVADGST 231 >gi|330944616|gb|EGH46566.1| extracellular solute-binding protein [Pseudomonas syringae pv. pisi str. 1704B] Length = 147 Score = 42.7 bits (99), Expect = 0.083, Method: Compositional matrix adjust. Identities = 26/90 (28%), Positives = 42/90 (46%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 S ++S L IK R L G+ + F V G + GFD D + + + D KI++ Sbjct: 35 SPSSSYLETIKARDKLIVGVFSDKPPFGFVNEQGQYVGFDTDLGKRFAKDLLGDEKKIEF 94 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLR 110 + + R LQS ++D++ N T R Sbjct: 95 VVVEPASRIPFLQSDKVDLILANMTVTPER 124 >gi|257869447|ref|ZP_05649100.1| extracellular solute-binding protein [Enterococcus gallinarum EG2] gi|257803611|gb|EEV32433.1| extracellular solute-binding protein [Enterococcus gallinarum EG2] Length = 269 Score = 42.7 bits (99), Expect = 0.083, Method: Compositional matrix adjust. Identities = 53/253 (20%), Positives = 108/253 (42%), Gaps = 22/253 (8%) Query: 7 VSILCLIILFFTSFST-------NASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWK 57 +S + L++ +FS +L K+ + G+ +T L G ++ A + + Sbjct: 5 ISTVLLLVFALMTFSACKGQSAAERDVLASSKESNQIIWGVKNDTRLFGLMDI-ATAEVR 63 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D +A++ I ++ + +K R L++ ID + T+ E + Sbjct: 64 GFDIDIAKAITEHILGRDGSAIFVEVTSKTRIPLLKNGNIDAIIAT--MTITDERKKQVD 121 Query: 118 FRPITYFD-GQGFIMHKKKGISSVSQLSG-ASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F + YFD GQ ++ K I + L+ ++ V G+T+ + + + + + Sbjct: 122 FSDV-YFDAGQSLLVAKDSPIQGIEDLNANTTVLVVKGSTSAINI----RKAAPEAKILE 176 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 E E A ++ + DA T D + L L + ++ P+ H++ + P AI +G Sbjct: 177 LENYAEAFTALQSGQGDAMTTDNAIL--LGMASENPNYHLV-GGTFTNEPYGIAIDKGQE 233 Query: 236 EWYNIVSWTHYAM 248 + V+ M Sbjct: 234 PFLKAVNQALKEM 246 >gi|56697873|ref|YP_168244.1| polar amino acid ABC transporter periplasmic substrate-binding protein [Ruegeria pomeroyi DSS-3] gi|56679610|gb|AAV96276.1| polar amino acid uptake family ABC transporter, periplasmic substrate-binding protein [Ruegeria pomeroyi DSS-3] Length = 277 Score = 42.7 bits (99), Expect = 0.083, Method: Compositional matrix adjust. Identities = 41/173 (23%), Positives = 74/173 (42%), Gaps = 11/173 (6%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 I++RG + G+ + +G G ++D ++ + +++ P+ A R Sbjct: 33 IQERGKIVVGVKADYKPWGFRDTDGSIIGMEIDMAAEVAKTL---GVELELTPVVASNRM 89 Query: 90 LALQSKQIDIL-SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 L+ QID++ + TD REI +G+ P Y G + K G SS ++L+G + Sbjct: 90 QFLEQGQIDLMIATMTDRADRREI-VGI-VGPNYYTSGTNILAPKALGFSSWNELNGKPV 147 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 C G + D + A + F E A R +C A+ D S++ Sbjct: 148 CGVQGAFYNQIVEDKYGA-----QIVAFAGAAEARQALRDKKCVAFVYDDSSI 195 >gi|94309344|ref|YP_582554.1| extracellular solute-binding protein [Cupriavidus metallidurans CH34] gi|93353196|gb|ABF07285.1| glutamate and aspartate transporter subunit ; periplasmic-binding component of ABC superfamily [Cupriavidus metallidurans CH34] gi|222871736|gb|EEF08867.1| predicted protein [Populus trichocarpa] Length = 299 Score = 42.7 bits (99), Expect = 0.083, Method: Compositional matrix adjust. Identities = 42/195 (21%), Positives = 80/195 (41%), Gaps = 6/195 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD---PS-KIQYLP 82 L IK G + G+ + F G+ D + AI D P+ +++ +P Sbjct: 30 LQKIKDTGVITLGVRDSSIPFNYNLGGVRQVGYSYDINMKIVEAIKDQLKLPNLQVKEIP 89 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R LQ+ IDI +T L R+ + +F + G ++ K GI + Sbjct: 90 ITSQNRITLLQNGTIDIECGSTTNNLERQKQV--SFTDTIFIIGTRIMVKKDGGIKDWAD 147 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G ++ AGTT+E L + + I + + + R A+ D + LY Sbjct: 148 LKGKNVVTTAGTTSERLLRKMNDDQKLGMNIISTKDHGQSFLTLESGRAVAFMMDDALLY 207 Query: 203 ALKLTNDRPSEHVIL 217 + P++ +++ Sbjct: 208 GERAKAKNPNDWIVV 222 >gi|317047307|ref|YP_004114955.1| family 3 extracellular solute-binding protein [Pantoea sp. At-9b] gi|316948924|gb|ADU68399.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b] Length = 308 Score = 42.7 bits (99), Expect = 0.085, Method: Compositional matrix adjust. Identities = 37/149 (24%), Positives = 62/149 (41%), Gaps = 6/149 (4%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQY 80 S L I K G + G V F+ G+ D+ A+ AI + P +++ Sbjct: 37 STLEKISKNGVIVVGHRESSVPFSYYDNEQKVVGYSQDYSNAIVEAIKKKLNKPDLQVKM 96 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 LP+ ++ R LQ+ D +T L R+ AF + G ++ K I Sbjct: 97 LPITSQNRIPLLQNGTFDFECGSTTNNLERQQQA--AFSDTIFVVGTRLLVKKGGPIKDF 154 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNM 169 + L G ++ V +GTT+E+ L + M Sbjct: 155 ADLKGKTVVVTSGTTSEILLNKLNDSQKM 183 >gi|217423103|ref|ZP_03454605.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei 576] gi|217394011|gb|EEC34031.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei 576] Length = 292 Score = 42.7 bits (99), Expect = 0.085, Method: Compositional matrix adjust. Identities = 41/198 (20%), Positives = 81/198 (40%), Gaps = 14/198 (7%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK--------I 78 L I+ G + G+ V F+ D + + + + ++ I D+ K + Sbjct: 23 LKKIRDTGVVTLGVRESSVPFSYY----DQQQRTIGYSQEIALKIVDEIKKTLNRPNLTV 78 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + +P+ ++ R +Q+ +D+ +T T +E + ++F + G I+ K G+ Sbjct: 79 REIPITSQNRIPLVQNGTVDLECGSTTHT--KERANQVSFSNSIFQYGMRLIVKKSSGVK 136 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 L+G ++ AGTT E L + M I + + ++ R A+ D Sbjct: 137 DFPDLAGKTVATTAGTTEERLLRQWNAEKGMAMQIISAKDHADAFLNVKSGRAVAFFMDE 196 Query: 199 SALYALKLTNDRPSEHVI 216 LY K P ++VI Sbjct: 197 PLLYGAKAKEANPGDYVI 214 >gi|310829836|ref|YP_003962193.1| extracellular solute-binding protein family 3 [Eubacterium limosum KIST612] gi|308741570|gb|ADO39230.1| extracellular solute-binding protein family 3 [Eubacterium limosum KIST612] Length = 271 Score = 42.7 bits (99), Expect = 0.086, Method: Compositional matrix adjust. Identities = 50/183 (27%), Positives = 86/183 (46%), Gaps = 16/183 (8%) Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD + + +P K+Q + + KE L L S ID + T RE ++ L Sbjct: 66 GFDVDLATEAAKRMGMEP-KMQVVNWDTKE--LELDSGNIDAIWNGLSVTPEREEAM-LM 121 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT-ELTLAD--YFKAHNMKYHPI 174 +P D Q ++ K GI+ + L G ++ +Q G++ + AD + K M +P Sbjct: 122 TKPYLKND-QVIVVKKDSGITKKADLEGKNVGLQKGSSAYDAFEADDIHTKVAGMNEYPE 180 Query: 175 VFERVEEIDAAYRAHRCDAYTGD-ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 ++++ R DA D + A Y + N +++VIL + +S A A+ +G Sbjct: 181 NVSALQDLGIG----RIDAVIVDSVVARYYISSEN---ADYVILDESLSPETYAVAVKKG 233 Query: 234 DTE 236 +TE Sbjct: 234 NTE 236 >gi|170695393|ref|ZP_02886539.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] gi|170139793|gb|EDT07975.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] Length = 297 Score = 42.7 bits (99), Expect = 0.086, Method: Compositional matrix adjust. Identities = 45/227 (19%), Positives = 94/227 (41%), Gaps = 6/227 (2%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDP 75 + + +A L IK G + G + F+ + G+ +F + A+ + P Sbjct: 20 AHAQDAGTLKKIKDTGVIALGHRESSIPFSYYDDKQEVIGYSQEFALKVVEAVKQKLNAP 79 Query: 76 S-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 + K++ +P+ ++ R +Q+ +D+ +T R+ + AF + G + K Sbjct: 80 NLKVKLIPVTSQNRIPLVQNGTVDMECGSTTNNAERQQQV--AFSNTIFVIGTRLMTKKD 137 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 GI + L G ++ AGTT+E L + ++ + I + E R A+ Sbjct: 138 SGIKDWADLKGKTVVTTAGTTSERLLRKMNQDKSLGMNIISAKDHGESFLTLSTGRAAAF 197 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 D + L + ++ P++ VI+ S + + D E+ +V Sbjct: 198 MMDDALLAGERAKSNTPNDFVIVGAPQSHEAYGCMLRKNDPEFKKVV 244 >gi|220924346|ref|YP_002499648.1| family 3 extracellular solute-binding protein [Methylobacterium nodulans ORS 2060] gi|219948953|gb|ACL59345.1| extracellular solute-binding protein family 3 [Methylobacterium nodulans ORS 2060] Length = 301 Score = 42.7 bits (99), Expect = 0.086, Method: Compositional matrix adjust. Identities = 50/230 (21%), Positives = 89/230 (38%), Gaps = 24/230 (10%) Query: 9 ILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 +L L++ + +A L IK+ G + G V F+ + N G+ +D C Sbjct: 6 LLPLLVAGLAAMPASAEELTGTLKKIKETGAITLGYRDSSVPFSYLDGNQKPVGYAMDIC 65 Query: 65 RALSSAI---FDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 + A+ P+ +++ P+ + R + + ID+ +T R+ + AF Sbjct: 66 YKIVEAVKAKLAMPNLEVKLNPVTSATRIPLMANGTIDLECGSTTNNAERQKQV--AFTN 123 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM-------KYHP 173 + F+ K ++ L G ++ +GTT + +Y AH K H Sbjct: 124 THFLTANRFVAKKASNVNKFEDLKGKTVVSTSGTTNIKQINEYNAAHKFGMTILPAKDHA 183 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 F VE R A+ D L +L + P ++I D ISK Sbjct: 184 EAFLMVE-------TGRAVAFVMDDVLLASLAAGSKEPDAYMISKDAISK 226 >gi|150403151|ref|YP_001330445.1| extracellular solute-binding protein [Methanococcus maripaludis C7] gi|150034181|gb|ABR66294.1| extracellular solute-binding protein family 3 [Methanococcus maripaludis C7] Length = 260 Score = 42.7 bits (99), Expect = 0.086, Method: Compositional matrix adjust. Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 10/168 (5%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 K G L G + F E A+G+ GFD+D +AL + +IQ++ A Sbjct: 36 KEGILVVGTDPTFPPFEEKNADGELVGFDIDLMKALGEKM---GLEIQFVEQPFDGIIPA 92 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI--MHKKKGISSVSQLSGASIC 149 L++++ D + T+ + + +AF +YFD I + + + SV L+G + Sbjct: 93 LKAEKFDCIISAV--TITDDRAKEVAFTN-SYFDAAQVIAVLVDDESVQSVDDLAGKVVA 149 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 Q GTT E Y A + + +E + + R DA D Sbjct: 150 AQLGTTGEYEAQHY--AEELGFEIKSYEVMADAFIDMENGRVDAVVTD 195 >gi|170731989|ref|YP_001763936.1| extracellular solute-binding protein [Burkholderia cenocepacia MC0-3] gi|169815231|gb|ACA89814.1| extracellular solute-binding protein family 3 [Burkholderia cenocepacia MC0-3] Length = 297 Score = 42.7 bits (99), Expect = 0.087, Method: Compositional matrix adjust. Identities = 44/227 (19%), Positives = 92/227 (40%), Gaps = 6/227 (2%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDP 75 +++ L IK G + G + F+ N G+ +F + A+ + P Sbjct: 20 AYAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGYSREFQLKIVDAVKKKLNLP 79 Query: 76 S-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 + +++ +P+ ++ R +Q+ +DI +T L R+ AF + G + K Sbjct: 80 NLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLERQQQA--AFSDTIFVIGTRLMTKKD 137 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 G+ + L G ++ AGTT+E L + + I + + + R A+ Sbjct: 138 SGVKDFADLKGKTVVTTAGTTSERLLRKMNNDKQLGMNIISAKDHGDSFNTLESGRAVAF 197 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 D + L + +P + VI+ S+ + +GD ++ +V Sbjct: 198 MMDDALLAGERAKAKQPGDWVIVGTPQSEEAYGCMMRKGDADFKKVV 244 >gi|29375354|ref|NP_814508.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecalis V583] gi|227554876|ref|ZP_03984923.1| amino acid ABC superfamily ATP binding cassette transporter protein [Enterococcus faecalis HH22] gi|256761528|ref|ZP_05502108.1| amino acid ABC transporter [Enterococcus faecalis T3] gi|257081023|ref|ZP_05575384.1| ABC-type amino acid transport/signal transduction protein system [Enterococcus faecalis E1Sol] gi|257083683|ref|ZP_05578044.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis Fly1] gi|257418368|ref|ZP_05595362.1| ABC amino acid transporter [Enterococcus faecalis T11] gi|29342814|gb|AAO80578.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecalis V583] gi|227175989|gb|EEI56961.1| amino acid ABC superfamily ATP binding cassette transporter protein [Enterococcus faecalis HH22] gi|256682779|gb|EEU22474.1| amino acid ABC transporter [Enterococcus faecalis T3] gi|256989053|gb|EEU76355.1| ABC-type amino acid transport/signal transduction protein system [Enterococcus faecalis E1Sol] gi|256991713|gb|EEU79015.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis Fly1] gi|257160196|gb|EEU90156.1| ABC amino acid transporter [Enterococcus faecalis T11] gi|315573457|gb|EFU85648.1| ABC transporter, permease protein [Enterococcus faecalis TX0309B] gi|315581418|gb|EFU93609.1| ABC transporter, permease protein [Enterococcus faecalis TX0309A] Length = 722 Score = 42.7 bits (99), Expect = 0.087, Method: Compositional matrix adjust. Identities = 55/209 (26%), Positives = 85/209 (40%), Gaps = 21/209 (10%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K F +S +++ T F + S + KK G + F + G + G DVD Sbjct: 4 KHFLLSFFVMMVTLLT-FISGTSAHAEGKK---YTIGTDLTFAPFEFQDSKGKYIGIDVD 59 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A++ D ++ PL A+QSKQID + T R+ S + P Sbjct: 60 LLDAIAK---DQDFEVDLKPLGFDSAVQAIQSKQIDGMIAGMSITDERKKSFDFS-DP-- 113 Query: 123 YFDGQGFIMHKKKG---ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV--FE 177 YFD G + KKG I S L G ++ + GT + A++ + + KY + F+ Sbjct: 114 YFD-SGLQLAVKKGNDKIKSYDDLKGKTVAAKVGTES----ANFLEKNKEKYDYTIKNFD 168 Query: 178 RVEEIDAAYRAHRCDAYTGDISAL-YALK 205 + A DA D L YA+K Sbjct: 169 DATGLYKALENGEADAIVDDYPVLGYAVK 197 >gi|307296217|ref|ZP_07576045.1| ABC transporter, permease protein [Enterococcus faecalis TX0411] gi|306496091|gb|EFM65673.1| ABC transporter, permease protein [Enterococcus faecalis TX0411] gi|315159996|gb|EFU04013.1| ABC transporter, permease protein [Enterococcus faecalis TX0312] Length = 722 Score = 42.7 bits (99), Expect = 0.088, Method: Compositional matrix adjust. Identities = 55/209 (26%), Positives = 86/209 (41%), Gaps = 21/209 (10%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K F +S +++ T F ++ S + KK G + F + G + G DVD Sbjct: 4 KHFLLSFFVMMVTLLT-FISSTSAHAEGKK---YTIGTDLTFAPFEFQDSKGKYIGIDVD 59 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A++ D ++ PL A+QSKQID + T R+ S + P Sbjct: 60 LLDAIAK---DQGFEVDLKPLGFDSAVQAIQSKQIDGMIAGMSITDERKKSFDFS-DP-- 113 Query: 123 YFDGQGFIMHKKKG---ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV--FE 177 YFD G + KKG I S L G ++ + GT + A++ + + KY + F+ Sbjct: 114 YFD-SGLQLAVKKGNDKIKSYDDLKGKTVAAKVGTES----ANFLEKNKEKYDYTIKNFD 168 Query: 178 RVEEIDAAYRAHRCDAYTGDISAL-YALK 205 + A DA D L YA+K Sbjct: 169 DATGLYKALENGEADAIVDDYPVLGYAVK 197 >gi|187925335|ref|YP_001896977.1| extracellular solute-binding protein family 3 [Burkholderia phytofirmans PsJN] gi|187716529|gb|ACD17753.1| extracellular solute-binding protein family 3 [Burkholderia phytofirmans PsJN] Length = 297 Score = 42.7 bits (99), Expect = 0.088, Method: Compositional matrix adjust. Identities = 47/227 (20%), Positives = 91/227 (40%), Gaps = 6/227 (2%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDP 75 + + +A L IK G + G + F+ + G+ +F + A+ + P Sbjct: 20 AHAQDAGTLKKIKDTGVISLGHRESSIPFSYYDDKQNVIGYSQEFALKVVEAVKQKLNMP 79 Query: 76 S-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 + K++ P+ ++ R +Q+ +D+ +T R+ AF + G + K Sbjct: 80 NLKVKLTPVTSQNRIPLVQNGTVDMECGSTTNNAERQQQA--AFSNTIFVIGTRLMTKKD 137 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 GI + L G ++ AGTT+E L + +M + I + E R A+ Sbjct: 138 SGIKDWADLKGKTVVTTAGTTSERLLRKMNQDKSMGMNIISAKDHGESFLTLSTGRAAAF 197 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 D + L + ++ P + VI+ S I + D E+ +V Sbjct: 198 MMDDALLAGERAKSNNPGDFVIVGAPQSHEAYGCMIRKNDPEFKKVV 244 >gi|317048576|ref|YP_004116224.1| family 3 extracellular solute-binding protein [Pantoea sp. At-9b] gi|316950193|gb|ADU69668.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b] Length = 266 Score = 42.7 bits (99), Expect = 0.089, Method: Compositional matrix adjust. Identities = 50/205 (24%), Positives = 86/205 (41%), Gaps = 10/205 (4%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V + L+ F ++L +K+RG L G+ F+ NG GF+V+F + Sbjct: 14 VMAVALVAGFNVKTFAAENLLNKVKERGTLLVGLEGTYPPFSFQDENGKLTGFEVEFAQE 73 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + K P +L SK+ID++ + R+ + P T Sbjct: 74 LAQHL---GVKASLKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDFS-TPYTISGV 129 Query: 127 QGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 Q + K G I+ LSG + V G+ E L D K +++ + + +++ Sbjct: 130 QALTLKKNAGSINKPEDLSGKKVGVGLGSNYEQWLRDNVKGVDIRTYDDDPTKYQDL--- 186 Query: 186 YRAHRCDAYTGD-ISALYALKLTND 209 R+ R DA D ++AL +K T D Sbjct: 187 -RSGRLDAILVDRLAALDLVKKTGD 210 >gi|159030704|emb|CAO88377.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 285 Score = 42.7 bits (99), Expect = 0.090, Method: Compositional matrix adjust. Identities = 48/201 (23%), Positives = 86/201 (42%), Gaps = 18/201 (8%) Query: 9 ILCLIIL---FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 IL L+IL F T + + ++L IK+ G L+ + + F +N + +G +DF + Sbjct: 5 ILTLVILSNVFATLPAKSETVLEKIKRTGLLEVAMREDAIPFGYRDSNNNLQGLCLDFIQ 64 Query: 66 ALSSAIFDDPSKIQYLPLNAK-------ERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 L + K+ ++ K RF L++K +D ++ + I G++F Sbjct: 65 LLREEL---KHKLNLQIISVKIYKSTLFNRFQLLENKTVDFECGPN--SIRKNIPDGVSF 119 Query: 119 RPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + G F++ + + S L G SI V TTT+ L + + V Sbjct: 120 SRPFFVTGTQFLVRSDNQNNFNFSSSLEGISIGVLRDTTTQELLRQKYPLATYQEFQGVT 179 Query: 177 ERVEEIDAAYRAHRCDAYTGD 197 R+ I + R +R DA+ D Sbjct: 180 GRLRGIQ-SLRRNRIDAFASD 199 >gi|148378449|ref|YP_001252990.1| polar amino acid ABC transporter amino acid-binding protein [Clostridium botulinum A str. ATCC 3502] gi|153933297|ref|YP_001382838.1| polar amino acid ABC transporter amino acid-binding protein [Clostridium botulinum A str. ATCC 19397] gi|153937497|ref|YP_001386405.1| polar amino acid ABC transporter amino acid-binding protein [Clostridium botulinum A str. Hall] gi|148287933|emb|CAL81999.1| binding-protein-dependent transport system,permease component [Clostridium botulinum A str. ATCC 3502] gi|152929341|gb|ABS34841.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum A str. ATCC 19397] gi|152933411|gb|ABS38910.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum A str. Hall] gi|322804728|emb|CBZ02280.1| amino acid ABC transporter, amino acid-binding protein [Clostridium botulinum H04402 065] Length = 267 Score = 42.7 bits (99), Expect = 0.090, Method: Compositional matrix adjust. Identities = 39/164 (23%), Positives = 77/164 (46%), Gaps = 13/164 (7%) Query: 3 KDFFVSILCLIILFFTSFSTNASI----LGDIKKRGFLKCGINTGL--VGFAEVKANGDW 56 K+ SIL + ++F + N S L DIK +G G++ +GF K G+ Sbjct: 4 KNILFSILIMGLIFMLTGCDNKSKEDTSLKDIKAKGEFVVGLDDSFPPMGFKNDK--GEI 61 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFD+D + ++ + K+ + P+ L+L +K ID++ T R+ + Sbjct: 62 VGFDIDLAKEVAKKM---GIKVVFKPVQWDGVVLSLNNKDIDVIWNGLTITEKRKEQINF 118 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 + +P + Q +++ I S L+ ++ +Q G+++E+ L Sbjct: 119 S-KPYVE-NKQIIVVNNDSNIKSKKDLNKKTVAIQLGSSSEVAL 160 >gi|167921349|ref|ZP_02508440.1| putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei BCC215] Length = 299 Score = 42.4 bits (98), Expect = 0.091, Method: Compositional matrix adjust. Identities = 41/198 (20%), Positives = 81/198 (40%), Gaps = 14/198 (7%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK--------I 78 L I+ G + G+ V F+ D + + + + ++ I D+ K + Sbjct: 30 LKKIRDTGVVTLGVRESSVPFSYY----DQQQRTIGYSQEIALKIVDEIKKTLNRPNLTV 85 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + +P+ ++ R +Q+ +D+ +T T +E + ++F + G I+ K G+ Sbjct: 86 REIPITSQNRIPLVQNGTVDLECGSTTHT--KERANQVSFSNSIFQYGMRLIVKKSSGVK 143 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 L+G ++ AGTT E L + M I + + ++ R A+ D Sbjct: 144 DFPDLAGKTVATTAGTTEERLLRQWNAEKGMAMQIISAKDHADAFLNVKSGRAVAFFMDE 203 Query: 199 SALYALKLTNDRPSEHVI 216 LY K P ++VI Sbjct: 204 PLLYGAKAKEANPGDYVI 221 >gi|114321290|ref|YP_742973.1| extracellular solute-binding protein [Alkalilimnicola ehrlichii MLHE-1] gi|114227684|gb|ABI57483.1| L-glutamine-binding protein [Alkalilimnicola ehrlichii MLHE-1] Length = 247 Score = 42.4 bits (98), Expect = 0.091, Method: Compositional matrix adjust. Identities = 37/160 (23%), Positives = 71/160 (44%), Gaps = 13/160 (8%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 L I +G V F + +G+W GF+++ A++ ++ +Y +N ALQ+ Sbjct: 25 LTIAIPSGFVPFM-FEEDGEWTGFEIELWEAIAE---ENGWDYEYNTMNFSGIITALQTG 80 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAG 153 ++D T RE ++ + Y+D +M + + + + L+G ++ V G Sbjct: 81 RVDGAIAAITITSQREETMDFSH---AYYDSGLMLMVRSDNETVRGIDDLAGKTLAVTTG 137 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 TT++ +D ++ F R E+ RA R DA Sbjct: 138 TTSDDYASDNLPDTQLRR----FSRAEQAYLEVRAGRVDA 173 >gi|126444823|ref|YP_001061310.1| solute-binding family 1 protein [Burkholderia pseudomallei 668] gi|126456775|ref|YP_001074257.1| solute-binding family 1 protein [Burkholderia pseudomallei 1106a] gi|167722081|ref|ZP_02405317.1| putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei DM98] gi|167826650|ref|ZP_02458121.1| putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 9] gi|167908550|ref|ZP_02495755.1| putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei NCTC 13177] gi|237509822|ref|ZP_04522537.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei MSHR346] gi|242313678|ref|ZP_04812695.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei 1106b] gi|254182839|ref|ZP_04889432.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei 1655] gi|126224314|gb|ABN87819.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei 668] gi|126230543|gb|ABN93956.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei 1106a] gi|184213373|gb|EDU10416.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei 1655] gi|235002027|gb|EEP51451.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei MSHR346] gi|242136917|gb|EES23320.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei 1106b] Length = 299 Score = 42.4 bits (98), Expect = 0.091, Method: Compositional matrix adjust. Identities = 41/198 (20%), Positives = 81/198 (40%), Gaps = 14/198 (7%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK--------I 78 L I+ G + G+ V F+ D + + + + ++ I D+ K + Sbjct: 30 LKKIRDTGVVTLGVRESSVPFSYY----DQQQRTIGYSQEIALKIVDEIKKTLNRPNLTV 85 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + +P+ ++ R +Q+ +D+ +T T +E + ++F + G I+ K G+ Sbjct: 86 REIPITSQNRIPLVQNGTVDLECGSTTHT--KERANQVSFSNSIFQYGMRLIVKKSSGVK 143 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 L+G ++ AGTT E L + M I + + ++ R A+ D Sbjct: 144 DFPDLAGKTVATTAGTTEERLLRQWNAEKGMAMQIISAKDHADAFLNVKSGRAVAFFMDE 203 Query: 199 SALYALKLTNDRPSEHVI 216 LY K P ++VI Sbjct: 204 PLLYGAKAKEANPGDYVI 221 >gi|53721189|ref|YP_110174.1| glutamate/aspartate periplasmic binding protein precursor [Burkholderia pseudomallei K96243] gi|76819782|ref|YP_336826.1| glutamate/aspartate periplasmic binding protein [Burkholderia pseudomallei 1710b] gi|124381383|ref|YP_001025039.1| putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia mallei NCTC 10229] gi|167818262|ref|ZP_02449942.1| putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 91] gi|167848169|ref|ZP_02473677.1| putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei B7210] gi|167896727|ref|ZP_02484129.1| putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 7894] gi|167913410|ref|ZP_02500501.1| putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 112] gi|52211603|emb|CAH37598.1| glutamate/aspartate periplasmic binding protein precursor [Burkholderia pseudomallei K96243] gi|76584255|gb|ABA53729.1| glutamate/aspartate periplasmic binding protein precursor [Burkholderia pseudomallei 1710b] Length = 299 Score = 42.4 bits (98), Expect = 0.091, Method: Compositional matrix adjust. Identities = 41/198 (20%), Positives = 81/198 (40%), Gaps = 14/198 (7%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK--------I 78 L I+ G + G+ V F+ D + + + + ++ I D+ K + Sbjct: 30 LKKIRDTGVVTLGVRESSVPFSYY----DQQQRTIGYSQEIALKIVDEIKKTLNRPNLTV 85 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + +P+ ++ R +Q+ +D+ +T T +E + ++F + G I+ K G+ Sbjct: 86 REIPITSQNRIPLVQNGTVDLECGSTTHT--KERANQVSFSNSIFQYGMRLIVKKSSGVK 143 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 L+G ++ AGTT E L + M I + + ++ R A+ D Sbjct: 144 DFPDLAGKTVATTAGTTEERLLRQWNAEKGMAMQIISAKDHADAFLNVKSGRAVAFFMDE 203 Query: 199 SALYALKLTNDRPSEHVI 216 LY K P ++VI Sbjct: 204 PLLYGAKAKEANPGDYVI 221 >gi|268319110|ref|YP_003292766.1| amino acid ABC transporter solute-binding component [Lactobacillus johnsonii FI9785] gi|262397485|emb|CAX66499.1| amino acid ABC transporter solute-binding component [Lactobacillus johnsonii FI9785] gi|329666941|gb|AEB92889.1| glutamine ABC transporter solute-binding component [Lactobacillus johnsonii DPC 6026] Length = 274 Score = 42.4 bits (98), Expect = 0.092, Method: Compositional matrix adjust. Identities = 43/197 (21%), Positives = 80/197 (40%), Gaps = 10/197 (5%) Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 +T L G +K G +GF+VD +AL+ + +K +++ K R L++ ID + Sbjct: 49 DTRLFGLMSIKT-GKIEGFEVDLAKALTKQMLGKDAKAEFVQTTPKTRIPLLKNGNIDAI 107 Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 T R+ + F + GQ ++ I +V L+G + GTT Sbjct: 108 LATMTITPDRKKQ--VTFSEPYFTAGQSLLVKDDSSIKNVRDLNGKTALAVKGTTA---- 161 Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220 D K K + ++ + A +A + A T D L + N + ++ Sbjct: 162 VDNVKKFAPKAKVLEYDDYGQAFTALKAGQGQAMTTDNGLLAGIASEN---KGYKLVGGT 218 Query: 221 ISKSPLAPAIIQGDTEW 237 + P A+ +G T++ Sbjct: 219 YTSEPYGIAVEKGQTDF 235 >gi|315166947|gb|EFU10964.1| ABC transporter, permease protein [Enterococcus faecalis TX1341] Length = 722 Score = 42.4 bits (98), Expect = 0.093, Method: Compositional matrix adjust. Identities = 55/209 (26%), Positives = 85/209 (40%), Gaps = 21/209 (10%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K F +S +++ T F + S + KK G + F + G + G DVD Sbjct: 4 KHFLLSFFVMMVTLLT-FISGTSAHAEGKK---YTIGTDLTFAPFEFQDSKGKYIGIDVD 59 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A++ D ++ PL A+QSKQID + T R+ S + P Sbjct: 60 LLDAIAK---DQDFEVDLKPLGFDSAVQAIQSKQIDGMIAGMSITDERKKSFDFS-DP-- 113 Query: 123 YFDGQGFIMHKKKG---ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV--FE 177 YFD G + KKG I S L G ++ + GT + A++ + + KY + F+ Sbjct: 114 YFD-SGLQLAVKKGNDKIKSYDDLKGKTVAAKVGTES----ANFLEKNKEKYDYTIKNFD 168 Query: 178 RVEEIDAAYRAHRCDAYTGDISAL-YALK 205 + A DA D L YA+K Sbjct: 169 DATGLYKALENGEADAIVDDYPVLGYAVK 197 >gi|320010776|gb|ADW05626.1| extracellular solute-binding protein family 3 [Streptomyces flavogriseus ATCC 33331] Length = 344 Score = 42.4 bits (98), Expect = 0.093, Method: Compositional matrix adjust. Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 8/130 (6%) Query: 30 IKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 I+KRG L G+ N+ G+ ++ +GFD+D A++ I D + + + + Sbjct: 84 IRKRGKLIAGVDQNSFQWGYRNPESR-TLEGFDIDLVHAIAEDILGDRDAVIFRAIPTNQ 142 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLG-LAFRPITYFDGQGFIMHKKKGISSVSQ-LSG 145 R AL++ ++D++ R R +G +AF + GQ + K I ++ L G Sbjct: 143 RIAALENDKVDVVVRTMTINCRR---IGQVAFSTAYFQAGQQVLAPKTSTIDGYNESLKG 199 Query: 146 ASICVQAGTT 155 +C G+T Sbjct: 200 KRVCTAEGST 209 >gi|259505861|ref|ZP_05748763.1| ABC amino acid transport system, secreted component [Corynebacterium efficiens YS-314] gi|259166535|gb|EEW51089.1| ABC amino acid transport system, secreted component [Corynebacterium efficiens YS-314] Length = 355 Score = 42.4 bits (98), Expect = 0.093, Method: Compositional matrix adjust. Identities = 31/132 (23%), Positives = 60/132 (45%), Gaps = 11/132 (8%) Query: 29 DIKKRGFLKCGINTG--LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 +I +RG L G++ L+ F + +G +GF+V + ++ IF +P + + + A Sbjct: 93 EIFQRGRLIVGVDQSKNLLSFRD-PVSGQLRGFEVQLAKEIARDIFGNPEAVDFRFIEAG 151 Query: 87 ERFLALQSKQIDILSRNTDWT--LLREISLGLAFRPITYFDGQG-FIMHKKKGISSVSQL 143 + L +D++ R+ T LR + Y Q ++ GI + L Sbjct: 152 DSLRGLSRGDVDMVIRSVSVTEDRLRRMEFS-----TPYMRTQTRLLVMDNSGIQGIEDL 206 Query: 144 SGASICVQAGTT 155 +G ++CV G+T Sbjct: 207 AGNTVCVADGST 218 >gi|170699413|ref|ZP_02890458.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] gi|170135669|gb|EDT03952.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] Length = 266 Score = 42.4 bits (98), Expect = 0.093, Method: Compositional matrix adjust. Identities = 41/180 (22%), Positives = 77/180 (42%), Gaps = 14/180 (7%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 S A +L +K+ G LK + F A G +GFDVD +A+++ + P Q+ Sbjct: 24 SHAADLLDTVKQAGVLKIALEGTYPPFDYRNAEGQLEGFDVDVAKAVAARLGVKP---QF 80 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK---KGI 137 + LQ+ + D++ T R+ +L + P Y Q ++ ++ + Sbjct: 81 VTTEWSGILAGLQAGKFDVIVNQVAITPSRQQALDFSM-PYVYSSAQ--LLQRQNDTRAF 137 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 S+ +L G + V G+ + L A +++ +P E + ++ A R DA D Sbjct: 138 KSLDELKGKKVGVTMGSNY-VDLVKTVPAIDLQVYPGTPENLRDLAAG----RIDAAVND 192 >gi|270158881|ref|ZP_06187538.1| amino acid ABC transporter periplasmic amino acid binding protein [Legionella longbeachae D-4968] gi|289166334|ref|YP_003456472.1| glutamine-binding periplasmic protein precursor [Legionella longbeachae NSW150] gi|269990906|gb|EEZ97160.1| amino acid ABC transporter periplasmic amino acid binding protein [Legionella longbeachae D-4968] gi|288859507|emb|CBJ13468.1| putative glutamine-binding periplasmic protein precursor [Legionella longbeachae NSW150] Length = 243 Score = 42.4 bits (98), Expect = 0.094, Method: Compositional matrix adjust. Identities = 34/121 (28%), Positives = 52/121 (42%), Gaps = 15/121 (12%) Query: 49 EVKANGDWKGFDVDFCRALS-----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103 E G+ KGFD+D + ++ A+FD+ LP A+ S Q DI Sbjct: 40 EYSERGEIKGFDIDLAKLIAKELGKEAVFDNMQFSTVLP--------AISSGQDDIAIAT 91 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163 T R+ + F YFDG + + + S +QL G + VQ G+ E+ L + Sbjct: 92 ITITEARKNNFD--FSEPYYFDGIASVYRSNQPVMSQNQLKGKKVAVQLGSIMEIWLRET 149 Query: 164 F 164 F Sbjct: 150 F 150 >gi|257077632|ref|ZP_05571993.1| amino acid ABC transporter [Enterococcus faecalis JH1] gi|256985662|gb|EEU72964.1| amino acid ABC transporter [Enterococcus faecalis JH1] Length = 569 Score = 42.4 bits (98), Expect = 0.095, Method: Compositional matrix adjust. Identities = 55/209 (26%), Positives = 85/209 (40%), Gaps = 21/209 (10%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K F +S +++ T F + S + KK G + F + G + G DVD Sbjct: 4 KHFLLSFFVMMVTLLT-FISGTSAHAEGKK---YTIGTDLTFAPFEFQDSKGKYIGIDVD 59 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A++ D ++ PL A+QSKQID + T R+ S + P Sbjct: 60 LLDAIAK---DQGFEVDLKPLGFDSAVQAIQSKQIDGMIAGMSITDERKKSFDFS-DP-- 113 Query: 123 YFDGQGFIMHKKKG---ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV--FE 177 YFD G + KKG I S L G ++ + GT + A++ + + KY + F+ Sbjct: 114 YFD-SGLQLAVKKGNDKIKSYDDLKGKTVAAKVGTES----ANFLEKNKEKYDYTIKNFD 168 Query: 178 RVEEIDAAYRAHRCDAYTGDISAL-YALK 205 + A DA D L YA+K Sbjct: 169 DATGLYKALENGEADAIVDDYPVLGYAVK 197 >gi|37525274|ref|NP_928618.1| glutamate and aspartate transporter subunit [Photorhabdus luminescens subsp. laumondii TTO1] gi|36784701|emb|CAE13601.1| Glutamate/aspartate transport system permease protein GltI [Photorhabdus luminescens subsp. laumondii TTO1] Length = 297 Score = 42.4 bits (98), Expect = 0.095, Method: Compositional matrix adjust. Identities = 52/262 (19%), Positives = 106/262 (40%), Gaps = 12/262 (4%) Query: 9 ILCLIILFFTSFSTNASILGDIKK---RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 +L +++L + + G +KK G + G V FA + G+ D+ Sbjct: 7 VLTMMLLGMAGAAQAEELTGTLKKVKDDGVIIVGHRESSVPFAYYDNHQKVVGYSQDYSN 66 Query: 66 ALSSAI---FDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + A+ D P+ +++ +P+ ++ R LQ+ D +T L R+ + F Sbjct: 67 LIVEAVKKKLDMPNLQVKLIPVTSQNRIPLLQNGTYDFECGSTSNNLERQKQV--TFSNS 124 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + + K GI L+G ++ V AGTT+E+ L +MK I + + Sbjct: 125 IFIITTRLLTKKGSGIKDFPDLAGKNVVVSAGTTSEILLNKLNDEKSMKMRIISAKDHGD 184 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + R A+ D + L + +P + I+ S+ + D ++ ++ Sbjct: 185 SFRTLESGRAIAFMVDDALLAGERAKAKKPDQWEIVGTPQSREAYGCISRKDDLQFKKLI 244 Query: 242 SWTHYAMVTAEELGITQKNINQ 263 T +V A+ G+ +K+ + Sbjct: 245 DET---IVQAQTSGVAEKSFER 263 >gi|294084531|ref|YP_003551289.1| putative extracellular solute-binding protein [Candidatus Puniceispirillum marinum IMCC1322] gi|292664104|gb|ADE39205.1| putative extracellular solute-binding protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 278 Score = 42.4 bits (98), Expect = 0.097, Method: Compositional matrix adjust. Identities = 52/223 (23%), Positives = 94/223 (42%), Gaps = 18/223 (8%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK---GFDVDFCRALSSAIFDDPSKIQY 80 A + IK RG L+ G+ +++ A G W G A + + +P ++ + Sbjct: 30 AGSMSSIKSRGSLRVGVTQAPPWYSKDPATGKWTSGVGVSAGMAMAAALGVEFEPVEVTW 89 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 ALQS +IDI+ D T R+ + P+ ++ + + +SS Sbjct: 90 -----GTAVAALQSNKIDIMFV-LDATAKRKEAADFPVSPLLFYS-LAVMAREDLDVSSW 142 Query: 141 SQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 L +G I V T+ + L + +++ +P E + AA+++ R DA Sbjct: 143 QDLNKAGIKISVPQATSMDAFLTENTGNADIQRYPGNTEAI----AAFQSGRVDAVCLFH 198 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 L A + R +I+P +P + A+ +GDTE+ N V Sbjct: 199 PPLIAARKRLGR--GKIIVPTPTKSNPTSAAVRKGDTEFVNFV 239 >gi|300362319|ref|ZP_07058495.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus gasseri JV-V03] gi|300353310|gb|EFJ69182.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus gasseri JV-V03] Length = 263 Score = 42.4 bits (98), Expect = 0.097, Method: Compositional matrix adjust. Identities = 39/147 (26%), Positives = 63/147 (42%), Gaps = 5/147 (3%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 IK+RG L G++ V + NG GFDVD A+ I P Q + + KE Sbjct: 34 IKERGTLVIGVDDSFVPMDFRQKNGKLVGFDVDLATAVCKKIGLKPD-FQTIDWSMKE-- 90 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 L++ ID++ +T + + +AF + Q + KK I + Q+ G + Sbjct: 91 TELRNGTIDVIWNG--YTKTKARAKKVAFSQPYLENDQILVTRKKDKIDNYRQMKGKVLG 148 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVF 176 VQ G++ L +Y + IV Sbjct: 149 VQTGSSGADDLDNYPNVLKKRVKSIVL 175 >gi|254195402|ref|ZP_04901830.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei S13] gi|254299631|ref|ZP_04967080.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei 406e] gi|157809634|gb|EDO86804.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei 406e] gi|169652149|gb|EDS84842.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei S13] Length = 298 Score = 42.4 bits (98), Expect = 0.097, Method: Compositional matrix adjust. Identities = 41/198 (20%), Positives = 81/198 (40%), Gaps = 14/198 (7%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK--------I 78 L I+ G + G+ V F+ D + + + + ++ I D+ K + Sbjct: 29 LKKIRDTGVVTLGVRESSVPFSYY----DQQQRTIGYSQEIALKIVDEIKKTLNRPNLTV 84 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + +P+ ++ R +Q+ +D+ +T T +E + ++F + G I+ K G+ Sbjct: 85 REIPITSQNRIPLVQNGTVDLECGSTTHT--KERANQVSFSNSIFQYGMRLIVKKSSGVK 142 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 L+G ++ AGTT E L + M I + + ++ R A+ D Sbjct: 143 DFPDLAGKTVATTAGTTEERLLRQWNAEKGMAMQIISAKDHADAFLNVKSGRAVAFFMDE 202 Query: 199 SALYALKLTNDRPSEHVI 216 LY K P ++VI Sbjct: 203 PLLYGAKAKEANPGDYVI 220 >gi|53715943|ref|YP_106460.1| putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia mallei ATCC 23344] gi|121597649|ref|YP_990548.1| putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia mallei SAVP1] gi|52421913|gb|AAU45483.1| putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia mallei ATCC 23344] gi|121225447|gb|ABM48978.1| putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia mallei SAVP1] Length = 298 Score = 42.4 bits (98), Expect = 0.097, Method: Compositional matrix adjust. Identities = 41/198 (20%), Positives = 81/198 (40%), Gaps = 14/198 (7%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK--------I 78 L I+ G + G+ V F+ D + + + + ++ I D+ K + Sbjct: 29 LKKIRDTGVVTLGVRESSVPFSYY----DQQQRTIGYSQEIALKIVDEIKKTLNRPNLTV 84 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + +P+ ++ R +Q+ +D+ +T T +E + ++F + G I+ K G+ Sbjct: 85 REIPITSQNRIPLVQNGTVDLECGSTTHT--KERANQVSFSNSIFQYGMRLIVKKSSGVK 142 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 L+G ++ AGTT E L + M I + + ++ R A+ D Sbjct: 143 DFPDLAGKTVATTAGTTEERLLRQWNAEKGMAMQIISAKDHADAFLNVKSGRAVAFFMDE 202 Query: 199 SALYALKLTNDRPSEHVI 216 LY K P ++VI Sbjct: 203 PLLYGAKAKEANPGDYVI 220 >gi|157146734|ref|YP_001454053.1| glutamate and aspartate transporter subunit [Citrobacter koseri ATCC BAA-895] gi|157083939|gb|ABV13617.1| hypothetical protein CKO_02507 [Citrobacter koseri ATCC BAA-895] Length = 317 Score = 42.4 bits (98), Expect = 0.099, Method: Compositional matrix adjust. Identities = 48/234 (20%), Positives = 89/234 (38%), Gaps = 6/234 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 S L I K G + G V F+ G+ D+ A+ A+ + P +++ Sbjct: 45 GSTLDKIAKNGIIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 104 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ AF + G + K I Sbjct: 105 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQA--AFSDTIFIVGTRLLAKKDSDIKD 162 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L G ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 163 FPDLKGKAVVVTSGTTSEILLHKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 222 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 L + +P I+ S+ + + D E+ +V T + T+ E Sbjct: 223 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKNDPEFKTLVDDTIAQVQTSGE 276 >gi|296158681|ref|ZP_06841511.1| extracellular solute-binding protein family 3 [Burkholderia sp. Ch1-1] gi|295891249|gb|EFG71037.1| extracellular solute-binding protein family 3 [Burkholderia sp. Ch1-1] Length = 267 Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust. Identities = 30/120 (25%), Positives = 56/120 (46%), Gaps = 8/120 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M++ F+ +L ++ T+ A L I K G ++ G+N + A GFD Sbjct: 1 MFRAVFL-VLAAVVATMTAQVAEARTLDQIIKSGTIRIGVNPNFPPMSSYNATNQLAGFD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI----LSRNTDWTLLREISLGL 116 +D ++S + K +++P A +R L S +IDI L+R+ + L + ++ L Sbjct: 60 IDVGNKIASTL---NIKAEFVPTEAAQRVPFLVSDRIDISLGALTRSAERAQLIDFTVPL 116 >gi|167741079|ref|ZP_02413853.1| putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 14] Length = 242 Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust. Identities = 44/211 (20%), Positives = 86/211 (40%), Gaps = 18/211 (8%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK--------I 78 L I+ G + G+ V F+ D + + + + ++ I D+ K + Sbjct: 23 LKKIRDTGVVTLGVRESSVPFSYY----DQQQRTIGYSQEIALKIVDEIKKTLNRPNLTV 78 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + +P+ ++ R +Q+ +D+ +T T +E + ++F + G I+ K G+ Sbjct: 79 REIPITSQNRIPLVQNGTVDLECGSTTHT--KERANQVSFSNSIFQYGMRLIVKKSSGVK 136 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 L+G ++ AGTT E L + M I + + ++ R A+ D Sbjct: 137 DFPDLAGKTVATTAGTTEERLLRQWNAEKGMAMQIISAKDHADAFLNVKSGRAVAFFMDE 196 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPA 229 LY K P ++V I SP++ A Sbjct: 197 PLLYGAKAKEANPGDYV----ITGNSPVSEA 223 >gi|167564787|ref|ZP_02357703.1| putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia oklahomensis EO147] gi|167571954|ref|ZP_02364828.1| putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia oklahomensis C6786] Length = 299 Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust. Identities = 40/194 (20%), Positives = 77/194 (39%), Gaps = 6/194 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQYLP 82 L I+ G + G+ V F+ G+ D + I + + ++ +P Sbjct: 30 LKKIRDTGIVTLGVRESSVPFSYYDQQQRTIGYSQDIALKIVDEIKKELKRPNLTVREIP 89 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R +Q+ +D+ +T T +E + ++F + G I+ K G+ Sbjct: 90 ITSQNRIPLVQNGTVDLECGSTTHT--KERANQVSFSNSFFQYGMRLIVKKSSGVKDFPD 147 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+G ++ AGTT E L + M I + + ++ R A+ D LY Sbjct: 148 LAGKTVATTAGTTEERLLRQWNAEKGMSMQIISAKDHADAFLNVKSGRAVAFFMDEPLLY 207 Query: 203 ALKLTNDRPSEHVI 216 K P ++VI Sbjct: 208 GAKAKEANPGDYVI 221 >gi|238790776|ref|ZP_04634535.1| Glutamate/aspartate periplasmic-binding protein [Yersinia frederiksenii ATCC 33641] gi|238721134|gb|EEQ12815.1| Glutamate/aspartate periplasmic-binding protein [Yersinia frederiksenii ATCC 33641] Length = 312 Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust. Identities = 51/249 (20%), Positives = 99/249 (39%), Gaps = 9/249 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQYLP 82 L IK G + G V F+ G+ D+ + AI + P +++ +P Sbjct: 43 LKKIKDNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNLIVDAIKKKLNAPDLQVKLIP 102 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R LQ+ D +T L R+ AF + G + K + Sbjct: 103 ITSQNRIPLLQNGTFDFECGSTTNNLERQQQA--AFSNTIFVVGTRLLTKKGSEVKDFKD 160 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+G ++ V +GTT+E+ L + M I + + + R A+ D + L Sbjct: 161 LAGKAVVVTSGTTSEVLLNKLNEKDKMNMRIISAKDHGDSFRTLESGRAVAFMMDDALLA 220 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 + +P + I+ S+ + + D + N+V T + TA+ G+ +K+ + Sbjct: 221 GERAKAKKPDQWDIVGTPQSQEAYGCMLRKNDPAFKNLVDET---IATAQTGGVAEKSFD 277 Query: 263 QVSKDTTNP 271 + K+ P Sbjct: 278 RWFKNPIPP 286 >gi|254473004|ref|ZP_05086402.1| extracellular solute-binding protein, family 3 [Pseudovibrio sp. JE062] gi|211957725|gb|EEA92927.1| extracellular solute-binding protein, family 3 [Pseudovibrio sp. JE062] Length = 248 Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust. Identities = 32/125 (25%), Positives = 59/125 (47%), Gaps = 5/125 (4%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 ++ G++ G F VK + +GF+VD RA++ DD ++++ ++ AL++ Sbjct: 23 IRVGMSGGYFPFTFVKQDV-LQGFEVDVARAIAEQTGDD---VEFVTMSFSGLIGALEAG 78 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 +ID ++ T RE + +P Y Q + + I+ V L G S+ V G+ Sbjct: 79 RIDTIANQITITPEREAKFTFS-QPYVYDGAQVVVKAGNEEINGVEDLKGKSVAVNLGSN 137 Query: 156 TELTL 160 E L Sbjct: 138 FEELL 142 >gi|241663976|ref|YP_002982336.1| family 3 extracellular solute-binding protein [Ralstonia pickettii 12D] gi|240866003|gb|ACS63664.1| extracellular solute-binding protein family 3 [Ralstonia pickettii 12D] Length = 254 Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust. Identities = 45/180 (25%), Positives = 78/180 (43%), Gaps = 18/180 (10%) Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 E NG GFDVD AL+ + +++ ++ K L S++ D+ T Sbjct: 47 EFVENGKRTGFDVDLIEALARTM---GRPVEWTDIDFKGLVPGLISRRFDVAISGIYITE 103 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKG---ISSVSQLSGASICVQAGTTTELTLADYFK 165 R+ + + Y+ G G + K+G I + + L+G + VQ GT + +Y K Sbjct: 104 ERKKVVDFT---VPYYHG-GLVAMVKQGNTAIKTPADLNGKKVSVQVGTKS----VNYLK 155 Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCD-AYTGDISALYALKLTNDRPSEHVILPDIISKS 224 + K + E+ E++ R D A TG +A Y +K RP ++ P + S+ Sbjct: 156 ENYPKVERVEVEKNEQMFNLVEIGRADAAVTGRPAAAYYVKA---RPGLRLVEPALTSEE 212 >gi|312136840|ref|YP_004004177.1| aliphatic sulfonates family abc transporter, periplasmic ligand-binding protein [Methanothermus fervidus DSM 2088] gi|311224559|gb|ADP77415.1| aliphatic sulfonates family ABC transporter, periplasmic ligand-binding protein [Methanothermus fervidus DSM 2088] Length = 315 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 41/136 (30%), Positives = 65/136 (47%), Gaps = 8/136 (5%) Query: 66 ALSSAIFDDPS-KIQYLPLNA-KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 AL+ +F+ K++ + A E A+ SKQIDI T + IS G+ + I Sbjct: 48 ALAKGMFEKEGIKVKTIEFKAGPELMRAIASKQIDIGYVGTP-PAVTSISKGVPVKIIAA 106 Query: 124 F--DGQGFIMHKKKGISSVSQLSGASICV-QAGTTTELTLADYFKAHNM--KYHPIVFER 178 +G G ++ K GI S+S L G ++ + G+ ++ L K HN+ K IV Sbjct: 107 VNEEGSGIVVKKGSGIHSISDLKGKTVAIPMKGSIQDVLLKMVLKQHNIDPKDVNIVEMD 166 Query: 179 VEEIDAAYRAHRCDAY 194 V + A +A R DA+ Sbjct: 167 VPMMPKALQAGRIDAF 182 >gi|291326463|ref|ZP_06124623.2| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Providencia rettgeri DSM 1131] gi|291314316|gb|EFE54769.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Providencia rettgeri DSM 1131] Length = 288 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 50/241 (20%), Positives = 88/241 (36%), Gaps = 30/241 (12%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQYLP 82 L IK G + G V F+ + G+ D+ A+ A+ + P +++ +P Sbjct: 19 LKKIKDNGVIVVGHRESSVPFSYYDNSQKVVGYSQDYSNAIVDAVKKKLNMPDLQVKLIP 78 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R LQ+ D +T + R+ AF + G + G+ + Sbjct: 79 ITSQNRIPLLQNGTFDFECGSTTNNVERQKQA--AFSNTIFVVGTRLLTKGDSGVKDFAD 136 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKY-------HPIVFERVEE--------IDAAYR 187 L+G ++ V +GTT+E+ L NMK H F +E DA Sbjct: 137 LAGKNVVVTSGTTSEILLNQLNDEKNMKMRIISAKDHGDSFRTLESGRAVAFMMDDALLA 196 Query: 188 AHRCDAYTGDI---------SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R A DI Y L D P ++ + I+ + + + W+ Sbjct: 197 GERAKAKKPDIWEIVGKPQTEEAYGCMLRKDDPQFKALIDETIANAQTSGVAEKSFDRWF 256 Query: 239 N 239 N Sbjct: 257 N 257 >gi|300856477|ref|YP_003781461.1| putative amino acid ABC transporter periplasmic solute-binding protein [Clostridium ljungdahlii DSM 13528] gi|300436592|gb|ADK16359.1| predicted ABC-type aminoacid transporter, periplasmic solute-binding component [Clostridium ljungdahlii DSM 13528] Length = 268 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 51/210 (24%), Positives = 89/210 (42%), Gaps = 15/210 (7%) Query: 29 DIKKRGFLKCGINTGL--VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 DIK +G G++ +GF + K G GFD+D +A + + K+ + P+ Sbjct: 35 DIKSKGQFVVGLDDSFPPMGFRDEK--GQIVGFDIDMAKAAAQKM---GVKVVFKPVEWD 89 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 L+L +K ID++ T R+ + AF + + Q ++ I + LSG Sbjct: 90 GIILSLNNKDIDVIWNGLTITDKRKKQI--AFSKVYLQNKQIIVVRNDSNIKNKKDLSGK 147 Query: 147 SICVQAGTTTELTL-ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD-ISALYAL 204 ++ +Q G+++E L +D A ++K E + R DA D + Y L Sbjct: 148 TVGLQMGSSSETALNSDAATAKSLKNIRKYSNNTEAL-LDLNQGRIDAVVVDEVVGRYYL 206 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + +P + IL D K I + D Sbjct: 207 Q---KKPGLYKILEDNFGKEDYGVGIRKSD 233 >gi|327393303|dbj|BAK10725.1| arginine-binding periplasmic protein 1 precursor ArtI [Pantoea ananatis AJ13355] Length = 246 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 50/197 (25%), Positives = 84/197 (42%), Gaps = 22/197 (11%) Query: 47 FAEVKANGDWKGFDVDFCRAL-----SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101 F V AN +GFDVD AL ++ F + + +P +L+ ++ D + Sbjct: 37 FEFVDANNKIQGFDVDLANALCKEMDATCTFTNQAFDSLIP--------SLKFRRFDAVM 88 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 D T RE + L +P Y+D + +K ++SV L G + VQ GTT + L Sbjct: 89 AGMDITPEREKQV-LFSKP--YYDNSAIFVAQKGKVASVEALKGKRVGVQNGTTHQKYLT 145 Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL--YALKLTNDRPSEHVILPD 219 D K ++ P ++ + + R DA GD + + + + N P + Sbjct: 146 D--KHADITVVP--YDSYQNAVLDLKNGRIDAVFGDSAVVNEWLKQNANLAPVGEKVTDK 201 Query: 220 IISKSPLAPAIIQGDTE 236 + L A+ QG+TE Sbjct: 202 AYFGTGLGIAVRQGNTE 218 >gi|325528847|gb|EGD05895.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia sp. TJI49] Length = 266 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 41/180 (22%), Positives = 78/180 (43%), Gaps = 14/180 (7%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 S A +L +K+ G LK + F A+G +GFDVD +A+++ + P Q+ Sbjct: 24 SHAADLLDTVKQAGVLKIALEGTYPPFDYRNADGQLEGFDVDVAKAVAARLGVKP---QF 80 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK---KGI 137 + LQ+ + D++ T R +L + +P Y Q ++ ++ + Sbjct: 81 VTTEWSGILAGLQAGKFDVIVNQVAITPSRRQALDFS-QPYVYSSAQ--LLQRQNDARAF 137 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 S+ +L G + V G+ + L A +++ +P E + ++ A R DA D Sbjct: 138 RSLDELKGKKVGVTMGSNY-VDLVKRVPAIDLQVYPGTPENLRDLAAG----RIDAAVND 192 >gi|330891102|gb|EGH23763.1| putative ABC transporter exported solute-binding protein [Pseudomonas syringae pv. mori str. 301020] gi|330985962|gb|EGH84065.1| putative ABC transporter exported solute-binding protein [Pseudomonas syringae pv. lachrymans str. M301315] Length = 279 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 38/159 (23%), Positives = 67/159 (42%), Gaps = 7/159 (4%) Query: 11 CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSS 69 L ++ + + L I +R + G+ F + A GD +G++V+ + L+ Sbjct: 12 ALGLILCAGLAQADATLERINERHKVSVGVLLSGPPFGTIDPATGDHQGYNVELSKELAK 71 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD-GQG 128 + D + L A R LQ ++D+L N +T E + L + P Y + G Sbjct: 72 RLSVDLETVSVL---APNRVQFLQQGKVDLLIANMQFT--EERAQILDYVPTPYEEVGGA 126 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 ++ K GIS L G +CV G+ L + + A Sbjct: 127 ALVRKGSGISMWEDLKGKPVCVSQGSNFIKPLQELYGAQ 165 >gi|315029877|gb|EFT41809.1| ABC transporter, permease protein [Enterococcus faecalis TX4000] Length = 722 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 55/209 (26%), Positives = 85/209 (40%), Gaps = 21/209 (10%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K F +S +++ T F + S + KK G + F + G + G DVD Sbjct: 4 KHFLLSFFVMMVTLLT-FISGTSAHAEGKK---YTIGTDLTFTPFEFQDSKGKYIGIDVD 59 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A++ D ++ PL A+QSKQID + T R+ S + P Sbjct: 60 LLDAIAK---DQGFEVDLKPLGFDSAVQAIQSKQIDGMIAGMSITDERKKSFDFS-DP-- 113 Query: 123 YFDGQGFIMHKKKG---ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV--FE 177 YFD G + KKG I S L G ++ + GT + A++ + + KY + F+ Sbjct: 114 YFD-SGLQLAVKKGNDKIKSYDDLKGKTVAAKVGTES----ANFLEKNKEKYDYTIKNFD 168 Query: 178 RVEEIDAAYRAHRCDAYTGDISAL-YALK 205 + A DA D L YA+K Sbjct: 169 DATGLYKALENGEADAIVDDYPVLGYAVK 197 >gi|209517530|ref|ZP_03266370.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] gi|209502063|gb|EEA02079.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] Length = 297 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 45/227 (19%), Positives = 90/227 (39%), Gaps = 6/227 (2%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDP 75 + + ++ L IK G + G + F+ + G+ D+ + A+ + P Sbjct: 20 AHAQDSGTLKKIKDTGVISLGHRESSIPFSFYDDKQNVIGYSQDYALKIVEAVKQKLNMP 79 Query: 76 S-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 + K++ +P+ ++ R +Q+ +DI +T L R+ AF + G + K Sbjct: 80 NLKVKLVPVTSQNRIPLVQNGTVDIECGSTTNNLERQQQA--AFTNTIFVIGTRLMTKKD 137 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 GI L G ++ AGTT+E L + +M + I + E R A+ Sbjct: 138 SGIKDFPDLKGKTVVTTAGTTSERLLRKMNQDKSMGMNIISAKDHGESFLTLSTGRAAAF 197 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 D + L + P + VI+ S+ + + D ++ + Sbjct: 198 MMDDALLAGERAKASNPGDFVIVGTPQSREAYGCMLRKNDADFKKVA 244 >gi|227517724|ref|ZP_03947773.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding/permease protein [Enterococcus faecalis TX0104] gi|229546597|ref|ZP_04435322.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding/permease protein [Enterococcus faecalis TX1322] gi|229548704|ref|ZP_04437429.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding/permease protein [Enterococcus faecalis ATCC 29200] gi|255971218|ref|ZP_05421804.1| amino acid ABC transporter [Enterococcus faecalis T1] gi|255973841|ref|ZP_05424427.1| aminoacid ABC transporter [Enterococcus faecalis T2] gi|256617647|ref|ZP_05474493.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis ATCC 4200] gi|256854374|ref|ZP_05559738.1| amino acid ABC transporter [Enterococcus faecalis T8] gi|256957372|ref|ZP_05561543.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis DS5] gi|256959892|ref|ZP_05564063.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis Merz96] gi|257086118|ref|ZP_05580479.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis D6] gi|257089189|ref|ZP_05583550.1| ABC amino acid transporter [Enterococcus faecalis CH188] gi|257415331|ref|ZP_05592325.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis AR01/DG] gi|257421017|ref|ZP_05598007.1| ABC amino acid transporter [Enterococcus faecalis X98] gi|293384723|ref|ZP_06630577.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Enterococcus faecalis R712] gi|293387465|ref|ZP_06632017.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Enterococcus faecalis S613] gi|294781574|ref|ZP_06746911.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1] gi|300862075|ref|ZP_07108155.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD Ef11] gi|307269814|ref|ZP_07551144.1| ABC transporter, permease protein [Enterococcus faecalis TX4248] gi|307276261|ref|ZP_07557389.1| ABC transporter, permease protein [Enterococcus faecalis TX2134] gi|307284476|ref|ZP_07564638.1| ABC transporter, permease protein [Enterococcus faecalis TX0860] gi|307289545|ref|ZP_07569490.1| ABC transporter, permease protein [Enterococcus faecalis TX0109] gi|312900356|ref|ZP_07759667.1| ABC transporter, permease protein [Enterococcus faecalis TX0470] gi|312904217|ref|ZP_07763379.1| ABC transporter, permease protein [Enterococcus faecalis TX0635] gi|312908578|ref|ZP_07767521.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512] gi|312910503|ref|ZP_07769348.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516] gi|312951870|ref|ZP_07770759.1| ABC transporter, permease protein [Enterococcus faecalis TX0102] gi|227074829|gb|EEI12792.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding/permease protein [Enterococcus faecalis TX0104] gi|229306170|gb|EEN72166.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding/permease protein [Enterococcus faecalis ATCC 29200] gi|229308287|gb|EEN74274.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding/permease protein [Enterococcus faecalis TX1322] gi|255962236|gb|EET94712.1| amino acid ABC transporter [Enterococcus faecalis T1] gi|255966713|gb|EET97335.1| aminoacid ABC transporter [Enterococcus faecalis T2] gi|256597174|gb|EEU16350.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis ATCC 4200] gi|256709934|gb|EEU24978.1| amino acid ABC transporter [Enterococcus faecalis T8] gi|256947868|gb|EEU64500.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis DS5] gi|256950388|gb|EEU67020.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis Merz96] gi|256994148|gb|EEU81450.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis D6] gi|256998001|gb|EEU84521.1| ABC amino acid transporter [Enterococcus faecalis CH188] gi|257157159|gb|EEU87119.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis ARO1/DG] gi|257162841|gb|EEU92801.1| ABC amino acid transporter [Enterococcus faecalis X98] gi|291077973|gb|EFE15337.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Enterococcus faecalis R712] gi|291083116|gb|EFE20079.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Enterococcus faecalis S613] gi|294451352|gb|EFG19817.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1] gi|295114022|emb|CBL32659.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)/amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Enterococcus sp. 7L76] gi|300848600|gb|EFK76357.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD Ef11] gi|306499506|gb|EFM68878.1| ABC transporter, permease protein [Enterococcus faecalis TX0109] gi|306503153|gb|EFM72407.1| ABC transporter, permease protein [Enterococcus faecalis TX0860] gi|306507061|gb|EFM76203.1| ABC transporter, permease protein [Enterococcus faecalis TX2134] gi|306513924|gb|EFM82526.1| ABC transporter, permease protein [Enterococcus faecalis TX4248] gi|310625464|gb|EFQ08747.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512] gi|310630168|gb|EFQ13451.1| ABC transporter, permease protein [Enterococcus faecalis TX0102] gi|310632313|gb|EFQ15596.1| ABC transporter, permease protein [Enterococcus faecalis TX0635] gi|311289199|gb|EFQ67755.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516] gi|311292544|gb|EFQ71100.1| ABC transporter, permease protein [Enterococcus faecalis TX0470] gi|315025741|gb|EFT37673.1| ABC transporter, permease protein [Enterococcus faecalis TX2137] gi|315031474|gb|EFT43406.1| ABC transporter, permease protein [Enterococcus faecalis TX0017] gi|315036139|gb|EFT48071.1| ABC transporter, permease protein [Enterococcus faecalis TX0027] gi|315145263|gb|EFT89279.1| ABC transporter, permease protein [Enterococcus faecalis TX2141] gi|315148141|gb|EFT92157.1| ABC transporter, permease protein [Enterococcus faecalis TX4244] gi|315151540|gb|EFT95556.1| ABC transporter, permease protein [Enterococcus faecalis TX0012] gi|315153184|gb|EFT97200.1| ABC transporter, permease protein [Enterococcus faecalis TX0031] gi|315154902|gb|EFT98918.1| ABC transporter, permease protein [Enterococcus faecalis TX0043] gi|315161961|gb|EFU05978.1| ABC transporter, permease protein [Enterococcus faecalis TX0645] gi|315164648|gb|EFU08665.1| ABC transporter, permease protein [Enterococcus faecalis TX1302] gi|315170674|gb|EFU14691.1| ABC transporter, permease protein [Enterococcus faecalis TX1342] gi|315578044|gb|EFU90235.1| ABC transporter, permease protein [Enterococcus faecalis TX0630] gi|323479955|gb|ADX79394.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis 62] gi|327534349|gb|AEA93183.1| amino acid ABC superfamily ATP binding cassette transporter, binding/permease protein [Enterococcus faecalis OG1RF] gi|329577603|gb|EGG59036.1| ABC transporter, permease protein [Enterococcus faecalis TX1467] Length = 722 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 55/209 (26%), Positives = 85/209 (40%), Gaps = 21/209 (10%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K F +S +++ T F + S + KK G + F + G + G DVD Sbjct: 4 KHFLLSFFVMMVTLLT-FISGTSAHAEGKK---YTIGTDLTFAPFEFQDSKGKYIGIDVD 59 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A++ D ++ PL A+QSKQID + T R+ S + P Sbjct: 60 LLDAIAK---DQGFEVDLKPLGFDSAVQAIQSKQIDGMIAGMSITDERKKSFDFS-DP-- 113 Query: 123 YFDGQGFIMHKKKG---ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV--FE 177 YFD G + KKG I S L G ++ + GT + A++ + + KY + F+ Sbjct: 114 YFD-SGLQLAVKKGNDKIKSYDDLKGKTVAAKVGTES----ANFLEKNKEKYDYTIKNFD 168 Query: 178 RVEEIDAAYRAHRCDAYTGDISAL-YALK 205 + A DA D L YA+K Sbjct: 169 DATGLYKALENGEADAIVDDYPVLGYAVK 197 >gi|210630268|ref|ZP_03296358.1| hypothetical protein COLSTE_00242 [Collinsella stercoris DSM 13279] gi|210160594|gb|EEA91565.1| hypothetical protein COLSTE_00242 [Collinsella stercoris DSM 13279] Length = 336 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 40/177 (22%), Positives = 76/177 (42%), Gaps = 10/177 (5%) Query: 30 IKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 IK G ++ G+ + F+ + + +G +GFD + L I D SK + + + R Sbjct: 92 IKDAGTMRLGVVQTSMLFSLLNEKDGKLRGFDAGLSQLLVRYILGDESKFESTQVTSDTR 151 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG--FIMHKKKGISSVSQLSGA 146 LQ+ Q+D + T R+ + A Y+ Q ++ I + L+G Sbjct: 152 ESVLQNDQVDAVFATYSITEDRKKLISFAG---PYYSTQQSILVLADNDSIEGLEDLAGK 208 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 ++ Q+G+T + + ++ F+ EE +A R DAY D + L++ Sbjct: 209 NVAAQSGSTGPSIMEELCPDAKLQE----FKTDEEARSALAQKRVDAYVIDRNMLFS 261 >gi|169796221|ref|YP_001714014.1| glutamate/aspartate ABC transporter substrate-binding protein [Acinetobacter baumannii AYE] gi|184157850|ref|YP_001846189.1| amino acid ABC transporter periplasmic protein [Acinetobacter baumannii ACICU] gi|213157045|ref|YP_002319090.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Acinetobacter baumannii AB0057] gi|215483676|ref|YP_002325897.1| Glutamate/aspartate periplasmic-binding protein precursor [Acinetobacter baumannii AB307-0294] gi|239502273|ref|ZP_04661583.1| Glutamate/aspartate periplasmic-binding protein precursor [Acinetobacter baumannii AB900] gi|260555283|ref|ZP_05827504.1| glutamate/aspartate transporter [Acinetobacter baumannii ATCC 19606] gi|294838744|ref|ZP_06783427.1| Glutamate/aspartate periplasmic-binding protein precursor [Acinetobacter sp. 6013113] gi|294841311|ref|ZP_06785994.1| Glutamate/aspartate periplasmic-binding protein precursor [Acinetobacter sp. 6014059] gi|294859044|ref|ZP_06796813.1| Glutamate/aspartate periplasmic-binding protein precursor [Acinetobacter sp. 6013150] gi|301347722|ref|ZP_07228463.1| Glutamate/aspartate periplasmic-binding protein precursor [Acinetobacter baumannii AB056] gi|301512792|ref|ZP_07238029.1| Glutamate/aspartate periplasmic-binding protein precursor [Acinetobacter baumannii AB058] gi|301596773|ref|ZP_07241781.1| Glutamate/aspartate periplasmic-binding protein precursor [Acinetobacter baumannii AB059] gi|169149148|emb|CAM87027.1| glutamate/aspartate transport protein (ABC superfamily, peri_bind) [Acinetobacter baumannii AYE] gi|183209444|gb|ACC56842.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Acinetobacter baumannii ACICU] gi|193077140|gb|ABO11918.2| glutamate/aspartate transport protein [Acinetobacter baumannii ATCC 17978] gi|213056205|gb|ACJ41107.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Acinetobacter baumannii AB0057] gi|213988773|gb|ACJ59072.1| Glutamate/aspartate periplasmic-binding protein precursor [Acinetobacter baumannii AB307-0294] gi|260411825|gb|EEX05122.1| glutamate/aspartate transporter [Acinetobacter baumannii ATCC 19606] gi|323517739|gb|ADX92120.1| amino acid ABC transporter periplasmic protein [Acinetobacter baumannii TCDC-AB0715] Length = 297 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 55/244 (22%), Positives = 94/244 (38%), Gaps = 7/244 (2%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 VS + L + TS A L IK G + G + V A G G+ VD C Sbjct: 8 LIVSTVMLCTVGATSQIQAADTLAKIKSTGKIVIGHRESSDPISYVVA-GKPVGYAVDIC 66 Query: 65 RALSSAIFDD---PS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ I + P K++Y + + R L + ID+ T + R+ +G F Sbjct: 67 NQFANDIKKELKMPGLKVEYKAVTSSTRIPELLAGNIDMECGTTTNSKQRQQQVG--FST 124 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + GI S++ L+G ++ GTT++ + K + I + Sbjct: 125 NYYATEVRMAVKANSGIKSLADLNGKAVVTTQGTTSDKYIKMNEKGQAINVQNIYGKDHA 184 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A + R A+ D + L L + P I+ ++S P I + D ++ I Sbjct: 185 DSFAMMASGRAAAFVMDDNILAGLIAKSSTPKAFAIVGPVLSSEPYGIMIAKDDPKFKAI 244 Query: 241 VSWT 244 T Sbjct: 245 ADRT 248 >gi|227820383|ref|YP_002824354.1| glutamine ABC transporter periplasmic protein [Sinorhizobium fredii NGR234] gi|227339382|gb|ACP23601.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Sinorhizobium fredii NGR234] Length = 261 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 36/166 (21%), Positives = 68/166 (40%), Gaps = 17/166 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + FV++ + A LGDI RG ++ + F V + G+D Sbjct: 2 LSRRLFVAMTAMAAAIGFGSIAQADALGDITARGTIRVAVPQDFPPFGSVGPDMAPVGYD 61 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI----LSRNTDWTLLREISLGL 116 +D ++ + K++ +P+ + R LQ+ ++D+ L +N D + I Sbjct: 62 IDMANLIAEKLG---VKVELVPVTSANRIPYLQTNKVDLVISSLGKNPDRE--KVIDFTA 116 Query: 117 AFRPI--TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 A+ P F F+ K + +L+G +I V G +L L Sbjct: 117 AYAPFYNGVFAPADFVAAKPE------ELAGKTIGVTRGAVEDLEL 156 >gi|227890384|ref|ZP_04008189.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus johnsonii ATCC 33200] gi|227849198|gb|EEJ59284.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus johnsonii ATCC 33200] Length = 277 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 43/197 (21%), Positives = 80/197 (40%), Gaps = 10/197 (5%) Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 +T L G +K G +GF+VD +AL+ + +K +++ K R L++ ID + Sbjct: 52 DTRLFGLMSIKT-GKIEGFEVDLAKALTKQMLGKDAKAEFVQTTPKTRIPLLKNGNIDAI 110 Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 T R+ + F + GQ ++ I +V L+G + GTT Sbjct: 111 LATMTITPDRKKQ--VTFSEPYFTAGQSLLVKDDSSIKNVRDLNGKTALAVKGTTA---- 164 Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220 D K K + ++ + A +A + A T D L + N + ++ Sbjct: 165 VDNVKKFAPKAKVLEYDDYGQAFTALKAGQGQAMTTDNGLLAGIASEN---KGYKLVGGT 221 Query: 221 ISKSPLAPAIIQGDTEW 237 + P A+ +G T++ Sbjct: 222 YTSEPYGIAVEKGQTDF 238 >gi|306823262|ref|ZP_07456638.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Bifidobacterium dentium ATCC 27679] gi|309801896|ref|ZP_07696011.1| ABC transporter glutamine-binding protein GlnH [Bifidobacterium dentium JCVIHMP022] gi|304553894|gb|EFM41805.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Bifidobacterium dentium ATCC 27679] gi|308221452|gb|EFO77749.1| ABC transporter glutamine-binding protein GlnH [Bifidobacterium dentium JCVIHMP022] Length = 270 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 37/162 (22%), Positives = 69/162 (42%), Gaps = 9/162 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V+ LC F S G G ++ GI G K NG + GFDVD + Sbjct: 6 VATLCACACVFA-----VSACGADDADGKIRIGIKFDQPGLG-FKKNGTYVGFDVDVAKY 59 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 ++ + +I + +K+R LQ+ +D + +++ E ++F + G Sbjct: 60 VAKKLGYSEDQIVWKEAPSKQREAMLQNGDVDFIVAT--YSITDERKKVVSFAGPYFVAG 117 Query: 127 QGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAH 167 Q ++ K + I L+G +C G+T+ +T+ + F + Sbjct: 118 QDLLVRKDETSIKGPEDLNGKRLCSVIGSTSAVTVKEKFASE 159 >gi|160898239|ref|YP_001563821.1| extracellular solute-binding protein [Delftia acidovorans SPH-1] gi|160363823|gb|ABX35436.1| extracellular solute-binding protein family 3 [Delftia acidovorans SPH-1] Length = 305 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 55/246 (22%), Positives = 105/246 (42%), Gaps = 26/246 (10%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK--GFDVDFCRALSSAI---FDDPS- 76 ++ L I++ G + G GF+ + +GD K G+ +D CR + I P+ Sbjct: 33 DSGTLAKIQQAGAITLGYRESSFGFSYL--DGDLKPVGYSMDICRRIVDEIKAQLKLPAL 90 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 +++Y + + R + + +D+ +T T L E +AF P + ++ G Sbjct: 91 QVRYQAVTSANRIPLVANGTVDLECGST--TNLVERQKQVAFSPDIFRYNVRMLVRADSG 148 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNM-------KYHPIVFERVEEIDAAYRAH 189 + SV+ L G ++ AGTT+ L + + N+ K H F VE + Sbjct: 149 LRSVADLQGKTVATTAGTTSFRLLREADRGRNLDITNLSGKDHSDSFMLVE-------SG 201 Query: 190 RCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 R A+ D L A ++ N + P +++I + + A + + D + IV M Sbjct: 202 RAQAFVLD-DILLAGQIANAKNPQDYLITGESLRTENQALMLRKDDAGFKAIVDRVVTGM 260 Query: 249 VTAEEL 254 + + E+ Sbjct: 261 MQSGEM 266 >gi|172060526|ref|YP_001808178.1| extracellular solute-binding protein [Burkholderia ambifaria MC40-6] gi|171993043|gb|ACB63962.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MC40-6] Length = 264 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 40/174 (22%), Positives = 73/174 (41%), Gaps = 12/174 (6%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 +L +K+RG L+ G+ F G+ GFDVD +A+++ + K +++ Sbjct: 29 LLDQVKQRGTLRVGLEGTFPPFNSKNPQGELVGFDVDIAKAVAAKL---GVKAEFVTTEW 85 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQL 143 LQ+ + D+++ T R+ +L F P + I K + S+ L Sbjct: 86 SGIIAGLQAGKFDVIANQVGITDKRKETLD--FSPAYTYSSAQLIQRKDDTRQFKSLEDL 143 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 G + V GT + +A ++K +P E + ++ A R DA D Sbjct: 144 KGKKLGVALGTNY-MDMAKSVPGIDVKTYPGAPEYLRDLAAG----RLDAALND 192 >gi|116493032|ref|YP_804767.1| amino acid ABC transporter periplasmic protein [Pediococcus pentosaceus ATCC 25745] gi|116103182|gb|ABJ68325.1| amino acid ABC transporter substrate-binding protein, PAAT family [Pediococcus pentosaceus ATCC 25745] Length = 273 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 46/212 (21%), Positives = 94/212 (44%), Gaps = 12/212 (5%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS-KIQYLPLNAKER 88 I+K + G++ V + NG G+D+D R A+F K+ + ++ Sbjct: 41 IQKNKKVVIGLDDSFVPMGFREKNGQLAGYDIDLAR----AVFRQYGIKVDFQTIDWSMN 96 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 L+++ ID++ T R+ +L L+ +T + Q ++ K GI+ ++ L S+ Sbjct: 97 VTELRNQTIDLIWNGLTITDERQKALTLSEPYLT--NQQIIVVKKSSGITKLADLKNKSV 154 Query: 149 CVQAGTTTELTLADY---FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD-ISALYAL 204 Q+G++ + D+ K + PI+++ A+R D + A Y + Sbjct: 155 GAQSGSSGAQDIDDHPQILKNRIKNHDPILYDSFNNAFIDLNANRIQGLLIDSVYANYYI 214 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 K ++ S++ I+ + A I +G+TE Sbjct: 215 KHMSN-SSDYRIIKSNMPSEQFAVGIKKGNTE 245 >gi|284032614|ref|YP_003382545.1| extracellular solute-binding protein family 3 protein [Kribbella flavida DSM 17836] gi|283811907|gb|ADB33746.1| extracellular solute-binding protein family 3 [Kribbella flavida DSM 17836] Length = 307 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 33/128 (25%), Positives = 53/128 (41%), Gaps = 4/128 (3%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 IK RG G+ ANG GFD++ R +S+ + DP KI+Y + + R Sbjct: 64 IKARGNAVVGVKADQPNLGYKDANGKRCGFDIEIARMVSAQLGFDPEKIEYKEIPSANRE 123 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ--LSGAS 147 A+ +ID T R+ ++F + GQ ++ K + L G Sbjct: 124 TAIAGGEIDYYVGTYSITDKRKKL--VSFAGPYFIAGQDLLVRKDDTSMDAGKDGLKGKK 181 Query: 148 ICVQAGTT 155 +C G+T Sbjct: 182 VCSATGST 189 >gi|27381511|ref|NP_773040.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] gi|27354679|dbj|BAC51665.1| blr6400 [Bradyrhizobium japonicum USDA 110] Length = 280 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 43/148 (29%), Positives = 67/148 (45%), Gaps = 9/148 (6%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLV--GFAEVKANGDWKGFDVDFCRALSSAIF 72 L + + A L DI+K G LK G V GF++ K G GFDV+F R ++ Sbjct: 19 LSLLARAARADTLQDIRKSGVLKAGCQVVQVPWGFSDDK--GVLTGFDVEFVRLFAA--- 73 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 D K + P+ + R AL + Q+D+L+ R+ + A RP D FI Sbjct: 74 DLGVKAEISPVTSSNRVAALLTGQVDMLAAVMGIFADRQKVVLFA-RPYCVNDTV-FIGK 131 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTL 160 + + S ++G + V GT ++ L Sbjct: 132 VGQTVKGWSDMTGLRVGVPRGTPQDIAL 159 >gi|322508165|gb|ADX03619.1| amino acid ABC transporter periplasmic protein [Acinetobacter baumannii 1656-2] Length = 297 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 55/244 (22%), Positives = 94/244 (38%), Gaps = 7/244 (2%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 VS + L + TS A L IK G + G + V A G G+ VD C Sbjct: 8 LIVSTVMLCTVGATSQIQAADTLAKIKSTGKIVIGHRESSDPISYVVA-GKPVGYAVDIC 66 Query: 65 RALSSAIFDD---PS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ I + P K++Y + + R L + ID+ T + R+ +G F Sbjct: 67 NQFANDIKKELKMPGLKVEYKAVTSSTRIPELLAGNIDMECGTTTNSKQRQQQVG--FST 124 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + GI S++ L+G ++ GTT++ + K + I + Sbjct: 125 NYYATEVRMAVKANSGIKSLADLNGKAVVTTQGTTSDKYIKMNEKGQAINVQNIYGKDHA 184 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A + R A+ D + L L + P I+ ++S P I + D ++ I Sbjct: 185 DSFAMMASGRAAAFVMDDNILAGLIAKSSTPKAFAIVGPVLSSEPYGIMIAKDDPKFKAI 244 Query: 241 VSWT 244 T Sbjct: 245 ADRT 248 >gi|134098327|ref|YP_001103988.1| putative glutamate binding protein [Saccharopolyspora erythraea NRRL 2338] gi|291004253|ref|ZP_06562226.1| putative glutamate binding protein [Saccharopolyspora erythraea NRRL 2338] gi|133910950|emb|CAM01063.1| putative glutamate binding protein [Saccharopolyspora erythraea NRRL 2338] Length = 299 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 48/219 (21%), Positives = 87/219 (39%), Gaps = 15/219 (6%) Query: 30 IKKRGFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDP-SKIQYLPLNAKE 87 IK+RG + G+ G G + GFD++ R +++ + DP + I Y P+ + Sbjct: 55 IKQRGRVTVGVKEDQPGLGFRDPVTGQYSGFDIEIARLVAAQLGLDPNTAIDYKPIPSTA 114 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF-DGQGFIMHKKK-GISSVSQLSG 145 R AL + ++D R+ +G A YF GQ ++ K I+ L G Sbjct: 115 REQALATGEVDYYVGTYTINDKRKEQVGFAG---PYFMAGQDVLVRKDNTDITGPETLKG 171 Query: 146 ASICVQAGTT--TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 +C G+T + + N+ + F+R E + DA T D + L Sbjct: 172 KKVCSATGSTPIQRVKEQQLTEPQNI----VEFQRYSECVQQLLDGQIDAVTTDDAILKG 227 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + P + ++ S+ P + + D N ++ Sbjct: 228 YAAQD--PDKLKVVGKTFSEEPYGIGVAKDDIALRNKIN 264 >gi|187927460|ref|YP_001897947.1| family 3 extracellular solute-binding protein [Ralstonia pickettii 12J] gi|309779838|ref|ZP_07674593.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Ralstonia sp. 5_7_47FAA] gi|187724350|gb|ACD25515.1| extracellular solute-binding protein family 3 [Ralstonia pickettii 12J] gi|308921415|gb|EFP67057.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Ralstonia sp. 5_7_47FAA] Length = 302 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 36/173 (20%), Positives = 70/173 (40%), Gaps = 2/173 (1%) Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 K+ +P+ ++ R LQ+ ID+ +T L R+ +F + G ++ K G Sbjct: 87 KVNEIPVTSQNRITLLQNGTIDLECGSTTNNLERQKQA--SFTNTIFIIGTRIMVKKDSG 144 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 + + L G ++ AGTT+E L M + I + + + R A+ Sbjct: 145 VKDWADLKGKNVVTTAGTTSERLLRKMNDEKQMGMNIISTKDHGQSFLTLESGRAVAFMM 204 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 D + LY + P+E V++ S+ + + D + + T M+ Sbjct: 205 DDALLYGERAKAKNPAEWVVVAKPQSREAYGCMVRKDDKPFKALADKTIAGMM 257 >gi|86742202|ref|YP_482602.1| extracellular solute-binding protein [Frankia sp. CcI3] gi|86569064|gb|ABD12873.1| amino acid ABC transporter substrate-binding protein, PAAT family [Frankia sp. CcI3] Length = 296 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 41/196 (20%), Positives = 84/196 (42%), Gaps = 9/196 (4%) Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 +G +GFDV+ + ++ A+ K+ Y+ + R +Q ++D++ +T+ + Sbjct: 76 SGQPEGFDVEISKIVTDALGIPRDKVSYVETVSANREPFIQQGRVDLVVAT--YTINDKR 133 Query: 113 SLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 + F Y GQ ++ K I+ L+G +C +G+T A+ + Sbjct: 134 KKVVDFAGPYYVSGQSIMVSKNNTDITGKDTLAGKKVCSVSGSTP----AENIRRVAPTA 189 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 ++F+ + A + + DA T D L L L + P ++ +K P + Sbjct: 190 QLVLFDVYSKCADALKNGQVDAVTTDKGIL--LGLVDKDPDAFKVVGGTFTKEPYGIGLK 247 Query: 232 QGDTEWYNIVSWTHYA 247 +GD + N ++ T A Sbjct: 248 KGDDAFRNFINDTLEA 263 >gi|107022626|ref|YP_620953.1| extracellular solute-binding protein [Burkholderia cenocepacia AU 1054] gi|116689575|ref|YP_835198.1| extracellular solute-binding protein [Burkholderia cenocepacia HI2424] gi|170732879|ref|YP_001764826.1| extracellular solute-binding protein [Burkholderia cenocepacia MC0-3] gi|206559974|ref|YP_002230738.1| periplasmic cystine-binding protein [Burkholderia cenocepacia J2315] gi|254245535|ref|ZP_04938856.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia cenocepacia PC184] gi|105892815|gb|ABF75980.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia AU 1054] gi|116647664|gb|ABK08305.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia HI2424] gi|124870311|gb|EAY62027.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia cenocepacia PC184] gi|169816121|gb|ACA90704.1| extracellular solute-binding protein family 3 [Burkholderia cenocepacia MC0-3] gi|198036015|emb|CAR51908.1| periplasmic cystine-binding protein [Burkholderia cenocepacia J2315] Length = 264 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 40/174 (22%), Positives = 73/174 (41%), Gaps = 12/174 (6%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 +L +K+RG L+ G+ F G+ GFDVD +A+++ + K +++ Sbjct: 29 LLDQVKQRGTLRVGLEGTFPPFNSKSPQGELVGFDVDIAKAVAAKL---GVKAEFVTTEW 85 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQL 143 LQ+ + D+++ T R+ +L F P + I K + S+ L Sbjct: 86 SGIIAGLQAGKFDVIANQVGITDKRKETLD--FSPAYTYSSAQLIQRKDDTRQFKSLEDL 143 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 G + V GT + +A ++K +P E + ++ A R DA D Sbjct: 144 KGKKLGVALGTNY-MDMAKSVPGIDVKTYPGAPEYLRDLAAG----RLDAALND 192 >gi|238920803|ref|YP_002934318.1| glutamate/aspartate periplasmic-binding protein [Edwardsiella ictaluri 93-146] gi|238870372|gb|ACR70083.1| glutamate/aspartate periplasmic-binding protein [Edwardsiella ictaluri 93-146] Length = 300 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 41/195 (21%), Positives = 80/195 (41%), Gaps = 6/195 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQYLP 82 L IK G + G V F+ G+ D+ A+ A+ + P+ +++ LP Sbjct: 31 LQKIKDSGVIVVGHRESSVPFSYYDNQQRVVGYSQDYANAIVDAVKKQLNLPTLQVKLLP 90 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R LQ+ D+ +T R+ + AF + G + ++ G+ Sbjct: 91 ITSQNRIPLLQNGTYDVECGSTTHNAERQQQV--AFSNTLFIVGTRLLTARESGVHDFRD 148 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+G + V +GTT+E+ L + M+ I + + + R A+ D + L Sbjct: 149 LAGKPVVVTSGTTSEIMLNRMNEKDGMQMRIISAKDHGDAFRTLESGRAVAFMMDDALLA 208 Query: 203 ALKLTNDRPSEHVIL 217 + +P VI+ Sbjct: 209 GERAKAKQPERWVIV 223 >gi|308234144|ref|ZP_07664881.1| amino acid ABC transporter substrate-binding protein, PAAT family [Atopobium vaginae DSM 15829] gi|328943631|ref|ZP_08241096.1| ABC superfamily ATP binding cassette transporter, binding protein [Atopobium vaginae DSM 15829] gi|327491600|gb|EGF23374.1| ABC superfamily ATP binding cassette transporter, binding protein [Atopobium vaginae DSM 15829] Length = 323 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 39/161 (24%), Positives = 68/161 (42%), Gaps = 9/161 (5%) Query: 39 GINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQID 98 G+ T ++ + +A+G +GFD L+ + D SK + + R LQ++Q+D Sbjct: 90 GVKTSILFASLDEADGKIRGFDAGLVSLLTRYVLGDESKSDLTLVTSNTRESVLQNEQVD 149 Query: 99 ILSRNTDWTLLREISLGLAFRPITYFDGQGFIM--HKKKGISSVSQLSGASICVQAGTTT 156 ++ T R+ ++ A Y+ Q IM I+ +S L+ ++ Q+G+T Sbjct: 150 VVFATYSITDARKKAVSFAG---PYYSTQQGIMVAQSNTTINGLSDLAQKNVAAQSGSTG 206 Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 L ++ F EE A R DAY D Sbjct: 207 PTILEQLAPEAKVQE----FTTDEEARNALSQGRVDAYVID 243 >gi|154487060|ref|ZP_02028467.1| hypothetical protein BIFADO_00898 [Bifidobacterium adolescentis L2-32] gi|154084923|gb|EDN83968.1| hypothetical protein BIFADO_00898 [Bifidobacterium adolescentis L2-32] Length = 280 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 35/146 (23%), Positives = 65/146 (44%), Gaps = 5/146 (3%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 G ++ GI G K NG + GFDVD + ++ + +I + +K+R LQ Sbjct: 37 GKIRIGIKFDQPGLG-FKKNGTYVGFDVDVAKYVAKKLGYSEDEIVWKESPSKQREAMLQ 95 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQA 152 + +D + +++ E + F + GQ ++ K + GI L+G +C Sbjct: 96 NGDVDYIV--ASYSITDERKKVVDFAGPYFVAGQDLLVRKDETGIDGPKDLNGKRLCSMT 153 Query: 153 GTTTELTLADYF-KAHNMKYHPIVFE 177 GTT+ + + + F K + P + E Sbjct: 154 GTTSAVNVKEKFAKQTQLMEQPGMAE 179 >gi|160896811|ref|YP_001562393.1| extracellular solute-binding protein [Delftia acidovorans SPH-1] gi|160362395|gb|ABX34008.1| extracellular solute-binding protein family 3 [Delftia acidovorans SPH-1] Length = 299 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 53/247 (21%), Positives = 101/247 (40%), Gaps = 15/247 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD-- 60 K ++I + ++F+ L IK G + G+ G NG + GF Sbjct: 2 KKHLLAIAVTALAAGSAFAQAGDTLAKIKSSGAVTLGVRES-SGLGYTLGNGKYVGFHTE 60 Query: 61 ------VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 D + L A D I+Y P+ ++ R + + +D+ +T + R+ + Sbjct: 61 MGERVLADIQKELGLAKLD----IKYQPVTSQNRIPLVTNGTVDLECGSTTNSQARQKDV 116 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 AF TY + + GI+ + L+G +I GTT+ TL +A + + + Sbjct: 117 --AFAVTTYVEEVRIAVKGNSGITGIKDLNGKTIVTTTGTTSVQTLRKNKRADGLTFKEV 174 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + + R DA+ D S L A + P+++ I+ + +S P+A + + D Sbjct: 175 MGKDHADSFLMLETGRADAFIMDGSILAANISKSKAPADYKIVGETLSVEPIACMLRKDD 234 Query: 235 TEWYNIV 241 + V Sbjct: 235 PAFKKAV 241 >gi|332108376|gb|EGJ09600.1| extracellular solute-binding protein family 3 [Rubrivivax benzoatilyticus JA2] Length = 300 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 46/192 (23%), Positives = 80/192 (41%), Gaps = 11/192 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA----LSSAIFDD 74 S T L IK + G+ F+ + N G+ VD C A L + Sbjct: 22 SAQTPGDTLSRIKSTKTITLGVREAARPFSFLDENKRPVGYSVDLCLAAVDELKRELKLP 81 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 ++QY ++ ER L +++ID+ +T T R+ + ++ T F Q ++ K Sbjct: 82 ELQVQYKVVSGAERIPKLLAREIDLECGSTTNTKARQEQVAFSY---TMFVAQMRVLTPK 138 Query: 135 KG-ISSVSQLSGASICVQAGTTTELTLADYFKAH-NMKYHPIVFERVEEIDAAYRAHRCD 192 ++++ L G + + GTT+E + N+K VF E AA +A + Sbjct: 139 DTPVTTLKDLDGLPLALSKGTTSEKLFTRLAETEVNLKLQ--VFPSNTEAYAALKAGKVR 196 Query: 193 AYTGDISALYAL 204 A+ D + L L Sbjct: 197 AFAQDDALLQGL 208 >gi|256964404|ref|ZP_05568575.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis HIP11704] gi|307272573|ref|ZP_07553826.1| ABC transporter, permease protein [Enterococcus faecalis TX0855] gi|256954900|gb|EEU71532.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis HIP11704] gi|306510858|gb|EFM79875.1| ABC transporter, permease protein [Enterococcus faecalis TX0855] Length = 722 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 55/209 (26%), Positives = 84/209 (40%), Gaps = 21/209 (10%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K F +S +++ T F + S + KK G + F + G + G DVD Sbjct: 4 KHFLLSFFVMMVTLLT-FISGTSAHAEGKK---YTIGTDLTFAPFEFQDSKGKYIGIDVD 59 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A++ D ++ PL A+QSKQID + T R+ S + P Sbjct: 60 LLNAIAK---DQGFEVDLKPLGFDSAVQAIQSKQIDGMIAGMSITDERKKSFDFS-DP-- 113 Query: 123 YFDGQGFIMHKKKG---ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV--FE 177 YFD G + KKG I S L G ++ + GT + A++ + KY + F+ Sbjct: 114 YFD-SGLQLAVKKGNDKIKSYDDLKGKTVAAKVGTES----ANFLEKSKEKYDYTIKNFD 168 Query: 178 RVEEIDAAYRAHRCDAYTGDISAL-YALK 205 + A DA D L YA+K Sbjct: 169 DATGLYKALENGEADAIVDDYPVLGYAVK 197 >gi|62180528|ref|YP_216945.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62128161|gb|AAX65864.1| putative periplasmic binding transport protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322715004|gb|EFZ06575.1| cystine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 252 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 50/224 (22%), Positives = 91/224 (40%), Gaps = 12/224 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 SF+ + +L +K+RG L G+ F+ +G GF+VDF AL+ + K Sbjct: 13 SFA-DEGLLNKVKERGTLLVGLEGTYPPFSFQGEDGKLTGFEVDFAEALAKHL---GVKA 68 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-I 137 P +L SK+ID++ + +R+ + P T Q + +G I Sbjct: 69 SLKPTKWDGMLASLDSKRIDVVINQVTISDVRKKKYDFS-TPYTVSGVQALVKKGNEGTI 127 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + + L G + V GT E L + + +++ + + +++ R R DA Sbjct: 128 KTAADLQGKKVGVGLGTNYEEWLRQHVQGVDIRTYDDDPTKYQDL----RVGRIDAIL-- 181 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + L AL L + D S+ A+ +G+ + V Sbjct: 182 VDRLAALDLVKKTKGTLAVTGDAFSRQESGVALRKGNEDLLKAV 225 >gi|288922652|ref|ZP_06416828.1| extracellular solute-binding protein family 3 [Frankia sp. EUN1f] gi|288346010|gb|EFC80363.1| extracellular solute-binding protein family 3 [Frankia sp. EUN1f] Length = 323 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 40/195 (20%), Positives = 87/195 (44%), Gaps = 9/195 (4%) Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G +GFDV+ + +++A+ K++++ + R +Q ++D++ +T+ + Sbjct: 104 GVPEGFDVEIAKIITNALGIPADKVKFVETVSVNREPFIQQHKVDMVVAT--YTINDKRK 161 Query: 114 LGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + F Y GQ ++ + I+ L+G ++C +G+T A+ + + Sbjct: 162 QVVDFAGPYYVAGQTLMVRAGESAITGKDSLAGKNVCSVSGSTP----AERIRTEAPQAK 217 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 ++F+ + A + + DA T D + L L L + P ++ S P I + Sbjct: 218 LVLFDVYSKCAEALKNGQVDAVTTDNAIL--LGLMDSDPGTFKLVGKPFSTEPYGIGIAK 275 Query: 233 GDTEWYNIVSWTHYA 247 GD E+ ++ T A Sbjct: 276 GDDEFRTFINETLTA 290 >gi|167576714|ref|ZP_02369588.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia thailandensis TXDOH] Length = 299 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 41/198 (20%), Positives = 80/198 (40%), Gaps = 14/198 (7%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK--------I 78 L I+ G + G+ V F+ D + + + + ++ I D+ K + Sbjct: 30 LKKIRDTGVVTLGVRESSVPFSYY----DQRQQTIGYSQEIALKIVDEIKKELNRTNLTV 85 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + +P+ ++ R +Q+ +D+ +T T +E + ++F + G I K G+ Sbjct: 86 REIPITSQNRIPLVQNGTVDLECGSTTHT--KERANQVSFSNSIFQYGMRLIAKKSSGVK 143 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 L+G ++ AGTT E L + M I + + ++ R A+ D Sbjct: 144 DFPDLAGKTVATTAGTTEERLLRQWNAEKGMSMQIISAKDHADAFLNVKSGRAVAFFMDE 203 Query: 199 SALYALKLTNDRPSEHVI 216 LY K P ++VI Sbjct: 204 PLLYGAKAKEANPGDYVI 221 >gi|218670321|ref|ZP_03519992.1| ABC transporter, substrate binding protein (amino acid) [Rhizobium etli GR56] Length = 158 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 34/140 (24%), Positives = 61/140 (43%), Gaps = 5/140 (3%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 ++ +A L DI RG ++ G+ TG V G+ G+DVD L P Sbjct: 23 SAVEAHAVTLNDIISRGTVRIGVLTGAPPMGMVDEKGNPTGYDVDVAN-LIGGYLSLP-- 79 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++ +PL R ALQ+ ++D L T R ++ + +P + F+ I + Sbjct: 80 VELVPLTPPARIPALQTGKVDFLVATLAPTGERAKTV-MFTQPYSAFN-MDIISGPDQKF 137 Query: 138 SSVSQLSGASICVQAGTTTE 157 + ++ L G + G++ E Sbjct: 138 AKLADLEGKRVAANRGSSQE 157 >gi|115351507|ref|YP_773346.1| extracellular solute-binding protein [Burkholderia ambifaria AMMD] gi|115281495|gb|ABI87012.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia ambifaria AMMD] Length = 264 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 40/174 (22%), Positives = 73/174 (41%), Gaps = 12/174 (6%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 +L +K+RG L+ G+ F G+ GFDVD +A+++ + K +++ Sbjct: 29 LLDQVKQRGTLRVGLEGTFPPFNAKNPQGELVGFDVDIAKAVAAKLG---VKAEFVTTEW 85 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQL 143 LQ+ + D+++ T R+ +L F P + I K + S+ L Sbjct: 86 SGIIAGLQAGKFDVIANQVGITDKRKETLD--FSPAYTYSSAQLIQRKDDTRQFKSLEDL 143 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 G + V GT + +A ++K +P E + ++ A R DA D Sbjct: 144 KGKKLGVALGTNY-MDMAKSVPGIDVKTYPGAPEYLRDLAAG----RLDAALND 192 >gi|166366371|ref|YP_001658644.1| extracellular solute-binding protein [Microcystis aeruginosa NIES-843] gi|166088744|dbj|BAG03452.1| extracellular solute-binding protein [Microcystis aeruginosa NIES-843] Length = 299 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 44/220 (20%), Positives = 88/220 (40%), Gaps = 15/220 (6%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 V + C++ +F S S +++ + + GFL G + ++ + G+ G+ +D Sbjct: 7 LVGLGCILPMFLASASLAETVVEKVARTGFLTVGTRFDAIPYSYIDDKGELVGYSMDVLE 66 Query: 66 ALSSAI---FDDPSKIQYLPLNAK-ERFLALQSKQIDI-LSRNTDWTLLREISLGLAFRP 120 + + P +Q + N E+ ++S +IDI S W + + +++ Sbjct: 67 RIRKRLETRLGRPVTLQMIEANQPGEKINLIRSGEIDIACSTAFTWERAKVVDFSISYS- 125 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI-VFERV 179 G + K +S+ L G I + + D K + + + V Sbjct: 126 ---ISGIRILAKKGSNLSTPQSLIGKRIALVPTSAA----VDVIKLVQPQATIVTTYSTV 178 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219 EE A + + DA GD +L A + D P + I+P+ Sbjct: 179 EEAIEALKTGKIDAIAGDSISL-AGTILRDNPKIYEIVPE 217 >gi|119025598|ref|YP_909443.1| glutamate-binding protein of ABC transporter system [Bifidobacterium adolescentis ATCC 15703] gi|118765182|dbj|BAF39361.1| glutamate-binding protein of ABC transporter system [Bifidobacterium adolescentis ATCC 15703] Length = 270 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 35/146 (23%), Positives = 65/146 (44%), Gaps = 5/146 (3%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 G ++ GI G K NG + GFDVD + ++ + +I + +K+R LQ Sbjct: 27 GKIRIGIKFDQPGLG-FKKNGTYVGFDVDVAKYVAKKLGYSEDEIVWKESPSKQREAMLQ 85 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQA 152 + +D + +++ E + F + GQ ++ K + GI L+G +C Sbjct: 86 NGDVDYIV--ASYSITDERKKVVDFAGPYFVAGQDLLVRKDETGIDGPKDLNGKRLCSMT 143 Query: 153 GTTTELTLADYF-KAHNMKYHPIVFE 177 GTT+ + + + F K + P + E Sbjct: 144 GTTSAVNVKEKFAKQTQLMEQPGMAE 169 >gi|311280246|ref|YP_003942477.1| cationic amino acid ABC transporter, periplasmic binding protein [Enterobacter cloacae SCF1] gi|308749441|gb|ADO49193.1| cationic amino acid ABC transporter, periplasmic binding protein [Enterobacter cloacae SCF1] Length = 243 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 50/202 (24%), Positives = 85/202 (42%), Gaps = 32/202 (15%) Query: 47 FAEVKANGDWKGFDVDFCRALSSAI-----FDDPSKIQYLPLNAKERFLALQSKQIDILS 101 F + A+ GFDVD AL I F + + +P +L+ ++ID + Sbjct: 34 FESMDASNKIVGFDVDLANALCKEIDATCTFTNQAFDSLIP--------SLKFRRIDAVM 85 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 D T RE + L +P Y+D + +K +++ QL G + VQ GTT + + Sbjct: 86 AGMDITPEREKQV-LFSKP--YYDNSALFIGQKGKYATIDQLKGKKVGVQNGTTHQKFIT 142 Query: 162 DYFKAHNMKYHP----IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS---EH 214 D HP + ++ + + R DA GD + + +ND+ + + Sbjct: 143 D--------KHPEITTVPYDSYQNAKLDLQNGRIDAVFGDTAVVTEWLKSNDKLASVGDK 194 Query: 215 VILPDIISKSPLAPAIIQGDTE 236 V D + L A+ QG+TE Sbjct: 195 VTDKDYFG-TGLGIAVRQGNTE 215 >gi|226198726|ref|ZP_03794290.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei Pakistan 9] gi|225929166|gb|EEH25189.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei Pakistan 9] Length = 359 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 41/198 (20%), Positives = 81/198 (40%), Gaps = 14/198 (7%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK--------I 78 L I+ G + G+ V F+ D + + + + ++ I D+ K + Sbjct: 90 LKKIRDTGVVTLGVRESSVPFSYY----DQQQRTIGYSQEIALKIVDEIKKTLNRPNLTV 145 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + +P+ ++ R +Q+ +D+ +T T +E + ++F + G I+ K G+ Sbjct: 146 REIPITSQNRIPLVQNGTVDLECGSTTHT--KERANQVSFSNSIFQYGMRLIVKKSSGVK 203 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 L+G ++ AGTT E L + M I + + ++ R A+ D Sbjct: 204 DFPDLAGKTVATTAGTTEERLLRQWNAEKGMAMQIISAKDHADAFLNVKSGRAVAFFMDE 263 Query: 199 SALYALKLTNDRPSEHVI 216 LY K P ++VI Sbjct: 264 PLLYGAKAKEANPGDYVI 281 >gi|126446655|ref|YP_001079383.1| putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia mallei NCTC 10247] gi|238561893|ref|ZP_04609795.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia mallei GB8 horse 4] gi|251766795|ref|ZP_02264976.2| bacterial extracellular solute-binding protein, family 3 [Burkholderia mallei PRL-20] gi|254175972|ref|ZP_04882630.1| putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia mallei ATCC 10399] gi|254189571|ref|ZP_04896081.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei Pasteur 52237] gi|254203467|ref|ZP_04909828.1| bacterial extracellular solute-binding protein family 3 [Burkholderia mallei FMH] gi|254205346|ref|ZP_04911699.1| bacterial extracellular solute-binding protein family 3 [Burkholderia mallei JHU] gi|254265422|ref|ZP_04956287.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei 1710a] gi|254356151|ref|ZP_04972428.1| bacterial extracellular solute-binding protein family 3 [Burkholderia mallei 2002721280] gi|126239509|gb|ABO02621.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia mallei NCTC 10247] gi|147745706|gb|EDK52785.1| bacterial extracellular solute-binding protein family 3 [Burkholderia mallei FMH] gi|147754932|gb|EDK61996.1| bacterial extracellular solute-binding protein family 3 [Burkholderia mallei JHU] gi|148025134|gb|EDK83303.1| bacterial extracellular solute-binding protein family 3 [Burkholderia mallei 2002721280] gi|157937249|gb|EDO92919.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei Pasteur 52237] gi|160697014|gb|EDP86984.1| putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia mallei ATCC 10399] gi|238523731|gb|EEP87168.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia mallei GB8 horse 4] gi|243064693|gb|EES46879.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia mallei PRL-20] gi|254216424|gb|EET05809.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei 1710a] gi|261826291|gb|ABM99036.2| bacterial extracellular solute-binding protein, family 3 [Burkholderia mallei NCTC 10229] Length = 359 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 41/198 (20%), Positives = 81/198 (40%), Gaps = 14/198 (7%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK--------I 78 L I+ G + G+ V F+ D + + + + ++ I D+ K + Sbjct: 90 LKKIRDTGVVTLGVRESSVPFSYY----DQQQRTIGYSQEIALKIVDEIKKTLNRPNLTV 145 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + +P+ ++ R +Q+ +D+ +T T +E + ++F + G I+ K G+ Sbjct: 146 REIPITSQNRIPLVQNGTVDLECGSTTHT--KERANQVSFSNSIFQYGMRLIVKKSSGVK 203 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 L+G ++ AGTT E L + M I + + ++ R A+ D Sbjct: 204 DFPDLAGKTVATTAGTTEERLLRQWNAEKGMAMQIISAKDHADAFLNVKSGRAVAFFMDE 263 Query: 199 SALYALKLTNDRPSEHVI 216 LY K P ++VI Sbjct: 264 PLLYGAKAKEANPGDYVI 281 >gi|42518676|ref|NP_964606.1| glutamine ABC transporter solute-binding component [Lactobacillus johnsonii NCC 533] gi|41582962|gb|AAS08572.1| glutamine ABC transporter solute-binding component [Lactobacillus johnsonii NCC 533] Length = 274 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 43/197 (21%), Positives = 80/197 (40%), Gaps = 10/197 (5%) Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 +T L G +K G +GF+VD +AL+ + +K +++ K R L++ ID + Sbjct: 49 DTRLFGLMSIKT-GKIEGFEVDLAKALTKQMLGKDAKAEFVQTTPKTRIPLLKNGNIDAI 107 Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 T R+ + F + GQ ++ I +V L+G + GTT Sbjct: 108 LATMTITPDRKKQ--VTFSEPYFTAGQSLLVKDDSSIKNVRDLNGKTALAVKGTTA---- 161 Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220 D K K + ++ + A +A + A T D L + N + ++ Sbjct: 162 VDNVKKFAPKATVLEYDDYGQAFTALKAGQGQAMTTDNGLLAGIASEN---KGYKLVGGT 218 Query: 221 ISKSPLAPAIIQGDTEW 237 + P A+ +G T++ Sbjct: 219 YTSEPYGIAVEKGQTDF 235 >gi|311898837|dbj|BAJ31245.1| putative ABC transporter substrate-binding protein [Kitasatospora setae KM-6054] Length = 316 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 33/136 (24%), Positives = 63/136 (46%), Gaps = 6/136 (4%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 +I+KRG+L G++ + + +G +GFD+D RA++ ++ D +K+ + + Sbjct: 74 EIRKRGYLVVGVDQSAYNWGYRDSLSGKIEGFDIDLARAVAKSVLGDENKLVLKTIATAD 133 Query: 88 R--FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LS 144 R L Q + ID++ R T R +AF + Q + K SV++ L Sbjct: 134 RVKLLQQQPQPIDLIVRAMTITCDRMKQ--IAFSAPYFKVSQRVVAPKTAHADSVAKALG 191 Query: 145 GASICVQAGTTTELTL 160 G +C +++ L Sbjct: 192 GKRVCAALNSSSHTEL 207 >gi|168181319|ref|ZP_02615983.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum Bf] gi|182675354|gb|EDT87315.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum Bf] Length = 267 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 39/164 (23%), Positives = 76/164 (46%), Gaps = 13/164 (7%) Query: 3 KDFFVSILCLIILFFTSFSTNASI----LGDIKKRGFLKCGINTGL--VGFAEVKANGDW 56 K+ SIL + ++F + N S L DIK +G G++ +GF K G Sbjct: 4 KNILFSILIMGLIFILTGCDNKSKEDTSLKDIKAKGEFVVGLDDSFPPMGFKNDK--GKI 61 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFD+D + ++ + K+ + P+ L+L +K ID++ T R+ + Sbjct: 62 VGFDIDLAKEVAKKM---GVKVVFKPVQWDGVVLSLNNKDIDVIWNGLTITEKRKEQINF 118 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 + +P + Q +++ I S L+ ++ +Q G+++E+ L Sbjct: 119 S-KPYVE-NKQIIVVNNDSNIKSKKDLNKKTVAIQLGSSSEVAL 160 >gi|163858459|ref|YP_001632757.1| solute-binding protein [Bordetella petrii DSM 12804] gi|163262187|emb|CAP44489.1| probable solute-binding protein [Bordetella petrii] Length = 284 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 38/189 (20%), Positives = 85/189 (44%), Gaps = 20/189 (10%) Query: 30 IKKRGFLKCGIN--TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 IK RG + CG + GF + ++ G+DVD C+A++ + K+Q+ P++ + Sbjct: 32 IKARGTIVCGTQNASSPYGFQD-PVKREYVGYDVDMCKAIAKEL---GLKLQHKPVSTEA 87 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI---MHKKKGISSVSQLS 144 R ++ ++D+++ W R + + + + QG+I + GI +++ L Sbjct: 88 RIPEVKMGRVDMMAGAVAWLPKRAEQVDFSDQYL-----QGYIKVLVKADSGIKTLADLK 142 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G +C +G+++ + N+ + F+ + + ++ + +A T L Sbjct: 143 GKKVCASSGSSSAAIAEKVLQGANV----LTFQNIAQCYVGLQSGKVEAMTA--GELVLR 196 Query: 205 KLTNDRPSE 213 + ND E Sbjct: 197 RFLNDSVKE 205 >gi|22125092|ref|NP_668515.1| glutamate and aspartate transporter subunit [Yersinia pestis KIM 10] gi|45440928|ref|NP_992467.1| glutamate and aspartate transporter subunit [Yersinia pestis biovar Microtus str. 91001] gi|51595455|ref|YP_069646.1| glutamate and aspartate transporter subunit [Yersinia pseudotuberculosis IP 32953] gi|108808475|ref|YP_652391.1| glutamate and aspartate transporter subunit [Yersinia pestis Antiqua] gi|108811264|ref|YP_647031.1| glutamate and aspartate transporter subunit [Yersinia pestis Nepal516] gi|145599901|ref|YP_001163977.1| glutamate and aspartate transporter subunit [Yersinia pestis Pestoides F] gi|149365484|ref|ZP_01887519.1| putative amino acid-binding protein precursor [Yersinia pestis CA88-4125] gi|153950913|ref|YP_001401882.1| glutamate and aspartate transporter subunit [Yersinia pseudotuberculosis IP 31758] gi|162419470|ref|YP_001606323.1| glutamate and aspartate transporter subunit [Yersinia pestis Angola] gi|165925198|ref|ZP_02221030.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165937719|ref|ZP_02226281.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Yersinia pestis biovar Orientalis str. IP275] gi|166008368|ref|ZP_02229266.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166212590|ref|ZP_02238625.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167399290|ref|ZP_02304814.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167422521|ref|ZP_02314274.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423472|ref|ZP_02315225.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167467950|ref|ZP_02332654.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Yersinia pestis FV-1] gi|170025231|ref|YP_001721736.1| glutamate and aspartate transporter subunit [Yersinia pseudotuberculosis YPIII] gi|186894486|ref|YP_001871598.1| glutamate and aspartate transporter subunit [Yersinia pseudotuberculosis PB1/+] gi|218929696|ref|YP_002347571.1| glutamate and aspartate transporter subunit [Yersinia pestis CO92] gi|229838162|ref|ZP_04458321.1| glutamate and aspartate transporter subunit, periplasmic-binding component of ABC superfamily [Yersinia pestis biovar Orientalis str. PEXU2] gi|229895954|ref|ZP_04511124.1| glutamate and aspartate transporter subunit, periplasmic-binding component of ABC superfamily [Yersinia pestis Pestoides A] gi|229898727|ref|ZP_04513872.1| glutamate and aspartate transporter subunit, periplasmic-binding component of ABC superfamily [Yersinia pestis biovar Orientalis str. India 195] gi|229901502|ref|ZP_04516624.1| glutamate and aspartate transporter subunit, periplasmic-binding component of ABC superfamily [Yersinia pestis Nepal516] gi|294504419|ref|YP_003568481.1| putative amino acid-binding protein precursor [Yersinia pestis Z176003] gi|21957947|gb|AAM84766.1|AE013722_5 solute-binding periplasmic protein of glutamate/aspartate ABC transporter [Yersinia pestis KIM 10] gi|45435787|gb|AAS61344.1| putative amino acid-binding protein precursor [Yersinia pestis biovar Microtus str. 91001] gi|51588737|emb|CAH20348.1| ABC transporter, periplasmic glutamate/aspatate binding protein [Yersinia pseudotuberculosis IP 32953] gi|108774912|gb|ABG17431.1| amino acid-binding protein precursor [Yersinia pestis Nepal516] gi|108780388|gb|ABG14446.1| putative amino acid-binding protein precursor [Yersinia pestis Antiqua] gi|115348307|emb|CAL21238.1| putative amino acid-binding protein precursor [Yersinia pestis CO92] gi|145211597|gb|ABP41004.1| amino acid-binding protein precursor [Yersinia pestis Pestoides F] gi|149291897|gb|EDM41971.1| putative amino acid-binding protein precursor [Yersinia pestis CA88-4125] gi|152962408|gb|ABS49869.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Yersinia pseudotuberculosis IP 31758] gi|162352285|gb|ABX86233.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Yersinia pestis Angola] gi|165914469|gb|EDR33084.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Yersinia pestis biovar Orientalis str. IP275] gi|165922805|gb|EDR39956.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165992750|gb|EDR45051.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166206521|gb|EDR51001.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166958535|gb|EDR55556.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051794|gb|EDR63202.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057642|gb|EDR67388.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169751765|gb|ACA69283.1| extracellular solute-binding protein family 3 [Yersinia pseudotuberculosis YPIII] gi|186697512|gb|ACC88141.1| extracellular solute-binding protein family 3 [Yersinia pseudotuberculosis PB1/+] gi|229681431|gb|EEO77525.1| glutamate and aspartate transporter subunit, periplasmic-binding component of ABC superfamily [Yersinia pestis Nepal516] gi|229688275|gb|EEO80346.1| glutamate and aspartate transporter subunit, periplasmic-binding component of ABC superfamily [Yersinia pestis biovar Orientalis str. India 195] gi|229694528|gb|EEO84575.1| glutamate and aspartate transporter subunit, periplasmic-binding component of ABC superfamily [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700877|gb|EEO88906.1| glutamate and aspartate transporter subunit, periplasmic-binding component of ABC superfamily [Yersinia pestis Pestoides A] gi|262362591|gb|ACY59312.1| putative amino acid-binding protein precursor [Yersinia pestis D106004] gi|262366405|gb|ACY62962.1| putative amino acid-binding protein precursor [Yersinia pestis D182038] gi|294354878|gb|ADE65219.1| putative amino acid-binding protein precursor [Yersinia pestis Z176003] gi|320016181|gb|ADV99752.1| glutamate and aspartate transporter subunit, periplasmic-binding component of ABC superfamily [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 305 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 50/249 (20%), Positives = 100/249 (40%), Gaps = 9/249 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQYLP 82 L +K G + G V F+ G+ D+ + AI + P+ +++ +P Sbjct: 36 LQKVKNNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNLIVDAIRKELNAPNLEVKLIP 95 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R LQ+ D +T L R+ AF + G + K + Sbjct: 96 ITSQNRIPLLQNGTFDFECGSTTNNLERQQQA--AFSNTIFVVGTRLLTKKDSEVKDFKD 153 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+G ++ V +GTT+E+ L + NM I + + + R A+ D + L Sbjct: 154 LAGKAVVVTSGTTSEVLLNKLNEKDNMNMRIISAKDHGDSFRTLESGRAVAFMMDDALLA 213 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 + +P E I+ S+ + + D + ++ T + TA+ G+ +K+ + Sbjct: 214 GERAKAKKPDEWSIVGTPQSEEAYGCMMRKNDPAFKALLDKT---IATAQTTGVAEKSFD 270 Query: 263 QVSKDTTNP 271 + K+ P Sbjct: 271 RWFKNPIPP 279 >gi|291616876|ref|YP_003519618.1| ArtI [Pantoea ananatis LMG 20103] gi|291151906|gb|ADD76490.1| ArtI [Pantoea ananatis LMG 20103] Length = 246 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 50/197 (25%), Positives = 83/197 (42%), Gaps = 22/197 (11%) Query: 47 FAEVKANGDWKGFDVDFCRAL-----SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101 F V AN +GFDVD AL ++ F + + +P +L+ ++ D + Sbjct: 37 FEFVDANNKIQGFDVDLANALCKEMDATCTFTNQAFDSLIP--------SLKFRRFDAVM 88 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 D T RE + L +P Y+D + +K ++SV L G + VQ GTT + L Sbjct: 89 AGMDITPEREKQV-LFSKP--YYDNSAIFVAQKGKVASVEALKGKRVGVQNGTTHQKYLT 145 Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPD 219 D K ++ P ++ + + R DA GD + + N + P + Sbjct: 146 D--KHADITVVP--YDSYQNAVLDLKNGRIDAVFGDSAVVNEWLKQNAKLAPVGEKVTDK 201 Query: 220 IISKSPLAPAIIQGDTE 236 + L A+ QG+TE Sbjct: 202 AYFGTGLGIAVRQGNTE 218 >gi|206563592|ref|YP_002234355.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315] gi|198039632|emb|CAR55600.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315] Length = 298 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 41/153 (26%), Positives = 67/153 (43%), Gaps = 16/153 (10%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD-------PS-KI 78 L IK G + GI V F+ D + ++ + R ++S I D P+ + Sbjct: 29 LKKIKDTGVVSLGIRESSVPFSY----SDNQQKNIGYSRDIASRIIDQLKTELNLPNLAV 84 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + +P+ ++ R LQ+ ID +T TL R+ AF + G F K G+ Sbjct: 85 KEIPITSQNRIPLLQNGTIDFECGSTTNTLERQKQA--AFSNSIFLYGIRFSTRKDSGVK 142 Query: 139 SVSQLSGASICVQAGTTTELTLA--DYFKAHNM 169 + L+G ++ AGT+ E L + KA NM Sbjct: 143 DFADLAGKTVATTAGTSDERLLRKLNEEKAMNM 175 >gi|162419996|ref|YP_001607785.1| amino acid ABC transporter periplasmic amino acid-binding protein [Yersinia pestis Angola] gi|162352811|gb|ABX86759.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia pestis Angola] Length = 262 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 33/155 (21%), Positives = 68/155 (43%), Gaps = 9/155 (5%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 L +++ + + A L I++RG L+ + F V + +G+D+D + L+ Sbjct: 10 LWAVLVLVQAPAVLADQLEKIQQRGVLRVAVPQDFPPFGSVGTDLQPQGYDIDMAQYLAD 69 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE--ISLGLAFRPITYFDGQ 127 + K+Q + + + R LQ+ ++D++ + RE I+ A+ P Sbjct: 70 KM---KLKLQLVSVTSANRVPYLQTDKVDLVISSLGKNPEREKAIAFSRAYEPFFL---- 122 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162 G K + QL+G +I V G ++ L++ Sbjct: 123 GVFGAKDDELKQPEQLAGKTIGVTRGAVEDMVLSE 157 >gi|326803632|ref|YP_004321450.1| ABC transporter, permease protein [Aerococcus urinae ACS-120-V-Col10a] gi|326651009|gb|AEA01192.1| ABC transporter, permease protein [Aerococcus urinae ACS-120-V-Col10a] Length = 497 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 43/177 (24%), Positives = 80/177 (45%), Gaps = 13/177 (7%) Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D +A++ I+ ++ + P++ + L S ID+L T RE + L Sbjct: 76 GFDIDLAQAIAE-IYG--WELDFQPIDWAMKETELNSGNIDLLWNGVGITPEREEQM-LF 131 Query: 118 FRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKA--HNMKYHPI 174 +P YF+ ++ KK I +S L G +I Q+G+TT + + + P+ Sbjct: 132 SQP--YFESPNIVITKKGSPIKELSDLVGKTISTQSGSTTAEDIKGWPNQLYQKLAQKPV 189 Query: 175 VFERVEEIDAAYRAHRCDAYTGDIS-ALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 ++ E+ A + R DA D + Y +++ + + + P SK P A+ Sbjct: 190 LYSSYNEVFADLDSGRVDAVVTDYTYGHYIMEVRGEEKYDSFVDP---SKEPEQMAV 243 >gi|319763771|ref|YP_004127708.1| extracellular solute-binding protein family 3 [Alicycliphilus denitrificans BC] gi|330823965|ref|YP_004387268.1| ABC transporter periplasmic subunit [Alicycliphilus denitrificans K601] gi|317118332|gb|ADV00821.1| extracellular solute-binding protein family 3 [Alicycliphilus denitrificans BC] gi|329309337|gb|AEB83752.1| ABC-type transporter, periplasmic subunit family 3 [Alicycliphilus denitrificans K601] Length = 296 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 26/132 (19%), Positives = 58/132 (43%), Gaps = 3/132 (2%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 +L + + L +K G + G+ + + + + G+ V+ C ++ +F Sbjct: 15 LLHLPAIAQPQGTLEKVKASGAIVLGVREASAPLSYLLGSSQYVGYHVELCERIAKNLFP 74 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 ++++Y + ++ R +Q+ +D+ +T T R+ + F TY + + K Sbjct: 75 Q-AQVRYQAVTSQNRMPLVQNGTVDLECGSTSNTASRKEQVD--FANTTYITEARYAVKK 131 Query: 134 KKGISSVSQLSG 145 GI S QL+G Sbjct: 132 SSGIESTGQLAG 143 >gi|116686709|ref|YP_839956.1| extracellular solute-binding protein [Burkholderia cenocepacia HI2424] gi|116652424|gb|ABK13063.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia HI2424] Length = 268 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 34/146 (23%), Positives = 64/146 (43%), Gaps = 9/146 (6%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L I K G L+ + F V + +G+D+D L+ ++ K++ +P+N+ Sbjct: 36 LDTIAKNGTLRVAVPEDYPPFGSVGTDMQPQGYDIDMAGLLAKSLG---VKLKLVPVNSA 92 Query: 87 ERFLALQSKQIDILSRNTDWTLLRE--ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 R L + ++D++ + T RE I A+ P YF QG +S+ + L+ Sbjct: 93 NRIPYLTTNKVDMVISSLGKTPEREKVIDFSSAYAP--YF--QGVFGPSDVKVSTPADLT 148 Query: 145 GASICVQAGTTTELTLADYFKAHNMK 170 G ++ G E+ L+ +K Sbjct: 149 GKTVGATRGALEEIALSQLAPNATIK 174 >gi|50120253|ref|YP_049420.1| glutamate and aspartate transporter subunit [Pectobacterium atrosepticum SCRI1043] gi|49610779|emb|CAG74224.1| glutamate/aspartate periplasmic binding protein [Pectobacterium atrosepticum SCRI1043] Length = 298 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 41/173 (23%), Positives = 71/173 (41%), Gaps = 10/173 (5%) Query: 10 LCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 L LI+L + + A L +K G + G V F+ G+ + Sbjct: 8 LSLILLGTAASAAQAEDLAGTLKKVKDNGVIVIGHRESSVPFSYYDNTQKVVGYSQAYSD 67 Query: 66 ALSSAI---FDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + AI D P+ +++ LP+ ++ R LQ+ D+ +T L R+ AF Sbjct: 68 KIVEAIKKKLDAPNLQVKLLPITSQNRIPLLQNGTFDLECGSTTNNLERQKQA--AFSNT 125 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + G + K G+ L+G ++ V +GTT+E+ L + MK I Sbjct: 126 IFVVGTRLLAKKDSGVKDFPDLAGKTVVVTSGTTSEVLLNKLNEEKQMKMRII 178 >gi|224583545|ref|YP_002637343.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224468072|gb|ACN45902.1| cystine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 266 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 50/224 (22%), Positives = 91/224 (40%), Gaps = 12/224 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 SF+ + +L +K+RG L G+ F+ +G GF+VDF AL+ + K Sbjct: 27 SFA-DEGLLNKVKERGTLLVGLEGTYPPFSFQGEDGKLTGFEVDFAEALAKHL---GVKA 82 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-I 137 P +L SK+ID++ + +R+ + P T Q + +G I Sbjct: 83 SLKPTKWDGMLASLDSKRIDVVINQVTISDVRKKKYDFS-TPYTVSGVQALVKKGNEGTI 141 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + + L G + V GT E L + + +++ + + +++ R R DA Sbjct: 142 KTAADLQGKKVGVGLGTNYEEWLRQHVQGVDIRTYDDDPTKYQDL----RVGRIDAIL-- 195 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + L AL L + D S+ A+ +G+ + V Sbjct: 196 VDRLAALDLVKKTKGTLAVTGDAFSRQESGVALRKGNEDLLKAV 239 >gi|17549152|ref|NP_522492.1| amino-acid-binding periplasmic ABC transporter protein [Ralstonia solanacearum GMI1000] gi|17431403|emb|CAD18082.1| probable amino-acid-binding periplasmic abc transporter protein [Ralstonia solanacearum GMI1000] Length = 280 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 36/153 (23%), Positives = 64/153 (41%), Gaps = 6/153 (3%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRAL 67 + L L SF A +I+K L+CG + FA + GFDVD C+AL Sbjct: 10 LTVLACLCAASFPVLADQWAEIQKNKALRCGTFADVPPFAAPDPKTREMVGFDVDLCQAL 69 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + + PL+ + R ++ ++D+ N +TL R + + F Y + Sbjct: 70 ARHLG---VAARITPLSVEARVPEVKMGRVDVTVANLAYTLGR--AEQIQFSDPYYLAKE 124 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 + S + G + G+T+EL++ Sbjct: 125 MLAVRASDPGKSKADYKGKRLAAAKGSTSELSI 157 >gi|312958352|ref|ZP_07772873.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas fluorescens WH6] gi|311287416|gb|EFQ65976.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas fluorescens WH6] Length = 264 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 55/220 (25%), Positives = 92/220 (41%), Gaps = 18/220 (8%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 LG+IKK G +K G+ F+ V +G GF+V+ AL+ + K+Q P + Sbjct: 33 LGNIKKAGEIKIGLEGTYPPFSFVDESGKLSGFEVELSEALAKEL-GVKVKLQATPWDG- 90 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSG 145 AL+SK++D + + R+ + +P T Q ++ K I + L+G Sbjct: 91 -ILAALESKRLDAVVNQVTISEERKKKYDFS-KPYTVSGIQALVLKKNVDTIKTADDLAG 148 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYH---PIVFERVEEIDAAYRAHRCDAYTGDISALY 202 + V GT E L D +K + P F+ + + R DA I L Sbjct: 149 KKVGVGLGTNYEQWLKDNQPKAIIKTYNDDPTKFQDL-------KVGRIDAIL--IDRLA 199 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 AL+ P + D S+ A+ +G+ E + V+ Sbjct: 200 ALEYAKKAP-DTAAAGDAFSRQESGIALRKGEPELLDAVN 238 >gi|304405143|ref|ZP_07386803.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus curdlanolyticus YK9] gi|304346022|gb|EFM11856.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus curdlanolyticus YK9] Length = 495 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 36/145 (24%), Positives = 67/145 (46%), Gaps = 10/145 (6%) Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + K GD G D+D +A++S + K++ ++ ALQ+ ++D + T Sbjct: 64 DAKHGGDIVGLDIDIAKAITSKL---GCKLEISAMDFNGLIAALQTHRVDFVMSGMSVTP 120 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168 R+ ++ F Y + KKK +++ +L G + VQ G+T E +A A Sbjct: 121 ERKENVD--FSNPYYAARNTIVSKKKKPFATLQELEGGKVGVQLGSTQETAIAGLKNAKI 178 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDA 193 K + I ++E+ +A+R DA Sbjct: 179 TKLNTIS-SLIQEL----KANRIDA 198 >gi|229587811|ref|YP_002869930.1| cystine transporter subunit [Pseudomonas fluorescens SBW25] gi|229359677|emb|CAY46525.1| putative ABC transport system, exported protein [Pseudomonas fluorescens SBW25] Length = 264 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 56/220 (25%), Positives = 91/220 (41%), Gaps = 18/220 (8%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 LG+IKK G +K G+ F+ V +G GF+V+ AL+ + K+Q P + Sbjct: 33 LGNIKKAGEIKIGLEGTYPPFSFVDESGKLSGFEVELSEALAKEL-GVKVKLQATPWDG- 90 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSG 145 AL+SK++D + + R+ + +P T Q ++ K I + L+G Sbjct: 91 -ILAALESKRLDAVVNQVTISEERKKKYDFS-KPYTVSGIQALVLKKNVDTIKTADDLAG 148 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYH---PIVFERVEEIDAAYRAHRCDAYTGDISALY 202 + V GT E L D +K + P F+ + R R DA I L Sbjct: 149 KKVGVGLGTNYEQWLKDNQPKAIIKTYNDDPTKFQDL-------RIGRIDAIL--IDRLA 199 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 AL+ P + D S+ A+ +G+ E V+ Sbjct: 200 ALEYAKKAP-DTAAAGDAFSRQEAGIALRKGEPELLAAVN 238 >gi|170698703|ref|ZP_02889769.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] gi|170136407|gb|EDT04669.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] Length = 264 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 40/174 (22%), Positives = 73/174 (41%), Gaps = 12/174 (6%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 +L +K+RG L+ G+ F G+ GFDVD +A+++ + K +++ Sbjct: 29 LLDQVKQRGTLRVGLEGTFPPFNAKNPQGELVGFDVDIAKAVAAKL---GVKAEFVTTEW 85 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQL 143 LQ+ + D+++ T R+ +L F P + I K + S+ L Sbjct: 86 SGIIAGLQAGKFDVIANQVGITDKRKETLD--FSPAYTYSSAQLIQRKDDTRQFKSLDDL 143 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 G + V GT + +A ++K +P E + ++ A R DA D Sbjct: 144 KGKKLGVALGTNY-MDMAKSVPGIDVKTYPGAPEYLRDL----AAGRLDAALND 192 >gi|170735478|ref|YP_001774592.1| extracellular solute-binding protein [Burkholderia cenocepacia MC0-3] gi|169821516|gb|ACA96097.1| extracellular solute-binding protein family 3 [Burkholderia cenocepacia MC0-3] Length = 268 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 34/146 (23%), Positives = 64/146 (43%), Gaps = 9/146 (6%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L I K G L+ + F V + +G+D+D L+ ++ K++ +P+N+ Sbjct: 36 LDTIAKNGTLRVAVPEDYPPFGSVGTDMQPQGYDIDMAGLLAKSLG---VKLKLVPVNSA 92 Query: 87 ERFLALQSKQIDILSRNTDWTLLRE--ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 R L + ++D++ + T RE I A+ P YF QG +S+ + L+ Sbjct: 93 NRIPYLTTNKVDMVISSLGKTPEREKVIDFSSAYAP--YF--QGVFGPSDVKVSTPADLT 148 Query: 145 GASICVQAGTTTELTLADYFKAHNMK 170 G ++ G E+ L+ +K Sbjct: 149 GKTVGATRGALEEIALSQLAPNATIK 174 >gi|170770021|ref|ZP_02904474.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia albertii TW07627] gi|218548382|ref|YP_002382173.1| arginine ABC transporter periplasmic-binding protein [Escherichia fergusonii ATCC 35469] gi|170121087|gb|EDS90018.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia albertii TW07627] gi|218355923|emb|CAQ88538.1| arginine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia fergusonii ATCC 35469] gi|323967298|gb|EGB62721.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli M863] gi|323976752|gb|EGB71840.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli TW10509] gi|324112655|gb|EGC06631.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia fergusonii B253] gi|325496805|gb|EGC94664.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia fergusonii ECD227] gi|327253650|gb|EGE65279.1| arginine-binding periplasmic protein 1 [Escherichia coli STEC_7v] Length = 243 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 49/203 (24%), Positives = 82/203 (40%), Gaps = 34/203 (16%) Query: 47 FAEVKANGDWKGFDVDFCRALSSAI-----FDDPSKIQYLPLNAKERFLALQSKQIDILS 101 F + AN GFDVD +AL I F + + +P +L+ +++D + Sbjct: 34 FESMDANNQIVGFDVDLAQALCKEIDATCTFSNQAFDSLIP--------SLKFRRVDAVM 85 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 D T RE + L P Y+D + ++ +SV QL G + VQ GTT + + Sbjct: 86 AGMDITPEREKQV-LFTTP--YYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFI- 141 Query: 162 DYFKAHNMKYHP----IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 M HP + ++ + + R D GD + + + D P + Sbjct: 142 -------MDKHPEITTVPYDSYQNAKLDLQNGRIDGVFGDTAVV--TEWLKDNPKLAAVG 192 Query: 218 PDIISK----SPLAPAIIQGDTE 236 + K + L A+ QG+TE Sbjct: 193 DKVTDKDYFGTGLGIAVRQGNTE 215 >gi|239827641|ref|YP_002950265.1| extracellular solute-binding protein family 3 [Geobacillus sp. WCH70] gi|239807934|gb|ACS24999.1| extracellular solute-binding protein family 3 [Geobacillus sp. WCH70] Length = 260 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 54/232 (23%), Positives = 92/232 (39%), Gaps = 11/232 (4%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFA--EVKANGDWKGFDVD 62 FF++ + LI L + G +++ L+ G + F + + GFDVD Sbjct: 7 FFIASILLIGLLSACGTGGEQKNGSGEQKKVLRMGTSADYAPFEYIDTTKGNEIIGFDVD 66 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + ++ + + + + ++ ALQS ++D + T +E + F + Sbjct: 67 LAKMITKEL---GYEFEIVDMDFTGLIPALQSGKVDFVLAG--MTPTKERKKNVDFSDVY 121 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y + K GI +V L G ++ VQ G+ E K +MK R+ E+ Sbjct: 122 YVARNMIVSKKGSGIKTVEDLKGKTVGVQTGSIQEGEANKIAKKVDMKIES--RNRIPEL 179 Query: 183 DAAYRAHRCD-AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 +A R D A D A L +N + H I P KS A A +G Sbjct: 180 IQEIQAGRFDAAIIEDTVAKGYLDSSNGKLEGHTI-PTDKEKSGYAIAFPKG 230 >gi|226327565|ref|ZP_03803083.1| hypothetical protein PROPEN_01436 [Proteus penneri ATCC 35198] gi|225204091|gb|EEG86445.1| hypothetical protein PROPEN_01436 [Proteus penneri ATCC 35198] Length = 231 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 51/193 (26%), Positives = 86/193 (44%), Gaps = 20/193 (10%) Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G+D D +++ D K++ P N R L SK++D+++ N +T+ E + + Sbjct: 10 GYDADIANEIAN---DLGVKLELRPTNPANRIPLLSSKKVDLIAAN--FTITDERAKQVD 64 Query: 118 FRPITYF-DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF---KAHNMKYHP 173 F I YF GQ FI +K +++ Q+ I GT E+TL + + K + P Sbjct: 65 FS-IPYFATGQKFIA-RKGVLTNPEQIHSLRIGADKGTVQEITLRERYPDTKVISYDDTP 122 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYAL--KLTNDRPSEHVILPDIISKSPLAPAII 231 + F AA R A T D + L L L + ++ I P I++ A A Sbjct: 123 LAF-------AALRNGNVQAITQDDAKLVGLLANLPDAIKADFEISPFSITREYQAVAAA 175 Query: 232 QGDTEWYNIVSWT 244 +G+ N ++ T Sbjct: 176 KGEERLINEINNT 188 >gi|330812332|ref|YP_004356794.1| putative ABC transporter, periplasmic component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380440|gb|AEA71790.1| putative ABC transporter, periplasmic component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 300 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 50/226 (22%), Positives = 94/226 (41%), Gaps = 7/226 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPS----KI 78 A LG I + G V F+ V ++G G+ V+ + I + + Sbjct: 27 AGTLGKIASTRSITLGYRDASVPFSYVGDSSGQPMGYSVELAGKIVERIKTQLALSQLDV 86 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 +Y + ++ R +Q+ +D+ +T T R+ + ++ I Y GQ + K GI Sbjct: 87 KYNLVTSQTRIPLVQNGTVDLECGSTGVTAERQKQVAFSYGFI-YVKGQ-LLTAKDSGIH 144 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 S + L G ++ AGTT E L Y + +N + I + E R A+ D Sbjct: 145 SFADLRGKNVVTTAGTTNERFLKSYNQDNNAEMFIISAKDHGESFQMLETGRAAAFYMDD 204 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + LY + P + V++ S+ + + + D ++ +V+ T Sbjct: 205 ALLYGERAKARDPHKWVVVGQEQSREIYSCMVRKDDPQFLALVNAT 250 >gi|293608330|ref|ZP_06690633.1| predicted protein [Acinetobacter sp. SH024] gi|292828903|gb|EFF87265.1| predicted protein [Acinetobacter sp. SH024] Length = 297 Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust. Identities = 53/244 (21%), Positives = 95/244 (38%), Gaps = 7/244 (2%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 +S + L + TS A L IK G + G + V A G G+ VD C Sbjct: 8 LIISTVMLCTVGATSQIQAADTLAKIKSTGKIVIGHRESSDPISYVVA-GKPVGYAVDIC 66 Query: 65 RALSSAIFDD---PS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ I + PS K++Y + + R L + ID+ T + R+ +G F Sbjct: 67 NQFANDIKKELKMPSLKVEYKAVTSSTRIPELLAGNIDMECGTTTNSKQRQQQVG--FST 124 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + GI S++ L+G ++ GTT++ + K + I + Sbjct: 125 NYYATEVRMAVKANSGIKSLADLNGKAVVTTQGTTSDKYIKMNEKGQAVNVQNIYGKDHA 184 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A + R A+ D + L L + P I+ ++S P + + D ++ + Sbjct: 185 DSFAMMASGRAAAFVMDDNILAGLIAKSSTPKAFAIVGPVLSSEPYGIMLAKDDPKFKAV 244 Query: 241 VSWT 244 T Sbjct: 245 ADRT 248 >gi|126657821|ref|ZP_01728974.1| hypothetical protein CY0110_13191 [Cyanothece sp. CCY0110] gi|126620761|gb|EAZ91477.1| hypothetical protein CY0110_13191 [Cyanothece sp. CCY0110] Length = 299 Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust. Identities = 49/204 (24%), Positives = 83/204 (40%), Gaps = 16/204 (7%) Query: 5 FFVSILCLIILF---FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 F++S + L++LF S++ S+L I + G L+ GI V F NG+ +G + Sbjct: 6 FYLSFVNLLLLFSWVLPSYTQEMSVLEKIDQTGLLEVGIREDAVPFGYRDINGNLEGLCL 65 Query: 62 DFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDI-LSRNTDWTLLREI-SLG 115 D L + +K ++ RF + +DI NT +RE+ Sbjct: 66 DLIALLREQLKQKLNKKVIALKLYKSTLYNRFELASDRIVDIECGPNT----IREVPEYQ 121 Query: 116 LAFRPITYFDGQGFIM--HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F + G ++ K K I+ L I V TT E +A+ + N+ Sbjct: 122 IQFSQPFFLTGTQLLVKTEKAKRINPNRSLDNIDIGVLRNTTNEQLMAERYPLANLVQFQ 181 Query: 174 IVFERVEEIDAAYRAHRCDAYTGD 197 V R I A + ++ DA+ D Sbjct: 182 GVTGRSRGIQ-ALQGNKIDAFASD 204 >gi|256830362|ref|YP_003159090.1| extracellular solute-binding protein family 3 [Desulfomicrobium baculatum DSM 4028] gi|256579538|gb|ACU90674.1| extracellular solute-binding protein family 3 [Desulfomicrobium baculatum DSM 4028] Length = 270 Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust. Identities = 41/164 (25%), Positives = 73/164 (44%), Gaps = 27/164 (16%) Query: 1 MYKDFFVSILCLII----LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 MY+ + I+CL + + S + S+L + +RG L+ G +T V +A NGD+ Sbjct: 1 MYRITAILIVCLSLSAGFMPRESSAAEKSVLDQVMERGVLRVGFDT-FVPWAMKDKNGDY 59 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL--------SRN----- 103 GF++D R +++ D +I+ +P AL + + DI+ SRN Sbjct: 60 IGFEIDVARKVAA---DMGVEIELVPTKWSGIIPALLTGKFDIIIGGMGIQPSRNLKVNF 116 Query: 104 ------TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 + +L+ I+ + F+ I+ K G SSV+ Sbjct: 117 SSPYEFSGMSLVASIAAAPNLSSLDDFNKPEIILSAKTGASSVA 160 >gi|120612711|ref|YP_972389.1| extracellular solute-binding protein [Acidovorax citrulli AAC00-1] gi|120591175|gb|ABM34615.1| amino acid ABC transporter substrate-binding protein, PAAT family [Acidovorax citrulli AAC00-1] Length = 314 Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust. Identities = 44/240 (18%), Positives = 90/240 (37%), Gaps = 6/240 (2%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK- 77 + +++A +L I G L FA A G G+ V+ C+ ++ A+ + Sbjct: 37 AVASHAGVLERIASGGKLVVAYRDAASPFAFKDAAGRPAGYAVELCQRVAEAVRRKTGRK 96 Query: 78 ---IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 I Y+P++ R A+ D+ ++ T E +AF + G ++ Sbjct: 97 GMEIAYVPVDLGNRMEAITQGGADLECGSS--TNNAERRQNVAFTIPHFITGTRLLVKAS 154 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I + + G + GTT + + H ++ + I + DA+ Sbjct: 155 SPIERIEDMGGHKLVSTRGTTALRAVQQLNREHALQINVIEAPDDQRAVEMVEKGEADAF 214 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D LYA P ++ ++ LA + + D E+ +V ++++ E+ Sbjct: 215 AMDDVLLYAFAAGRPDPKALKVVGKFVTAEALAIMLPKDDPEFKKVVDDEMRRLISSREI 274 >gi|295398457|ref|ZP_06808496.1| amino acid ABC superfamily ATP binding cassette transporter [Aerococcus viridans ATCC 11563] gi|294973321|gb|EFG49109.1| amino acid ABC superfamily ATP binding cassette transporter [Aerococcus viridans ATCC 11563] Length = 506 Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust. Identities = 41/161 (25%), Positives = 69/161 (42%), Gaps = 9/161 (5%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS-KIQYLPLNAKE 87 DIK RG L+ G N+ F E D K V L+ I DD ++ + + Sbjct: 55 DIKDRGVLRVGTNSTYAPF-EFSILKDGKNQVVGLDIFLAQKIADDLGVDLEVVDMEFSN 113 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS--- 144 +L + QIDI+ T R S+ F I GQ F++ + K +S ++ S Sbjct: 114 LLTSLDTGQIDIVLAGMTSTEERAKSVD--FSDIYQVSGQSFVIQESK-VSEITDDSYFS 170 Query: 145 -GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 G I + GTT +L + +Y+ ++ + + +D+ Sbjct: 171 NGGKISIGEGTTQQLLVGEYYPNSEVQVMRTTTDSISALDS 211 >gi|37525534|ref|NP_928878.1| arginine-binding periplasmic protein 1 precursor [Photorhabdus luminescens subsp. laumondii TTO1] gi|36784962|emb|CAE13880.1| Arginine-binding periplasmic protein 1 precursor [Photorhabdus luminescens subsp. laumondii TTO1] Length = 244 Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust. Identities = 37/160 (23%), Positives = 65/160 (40%), Gaps = 20/160 (12%) Query: 47 FAEVKANGDWKGFDVDFCRALSSAI-----FDDPSKIQYLPLNAKERFLALQSKQIDILS 101 F + AN +GFDVD A+ I F + S +P +L+ ++ D L+ Sbjct: 36 FEFIDANNKIQGFDVDLANAICEKINATCTFTNQSFDSLIP--------SLKFRRFDALA 87 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 D T R+ + TY+D + K +SS ++L G + +Q GTT + Sbjct: 88 AGIDITPERQKQVDFTN---TYYDNSAVFISVKGKVSSTAELKGKLVGIQNGTTHQ---- 140 Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 Y + + ++ + + R DA GD + + Sbjct: 141 KYLMEQRKEIKTVPYDSYQNAILDLKNGRLDAVFGDTAVV 180 >gi|107023050|ref|YP_621377.1| extracellular solute-binding protein [Burkholderia cenocepacia AU 1054] gi|105893239|gb|ABF76404.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia AU 1054] Length = 247 Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust. Identities = 34/146 (23%), Positives = 64/146 (43%), Gaps = 9/146 (6%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L I K G L+ + F V + +G+D+D L+ ++ K++ +P+N+ Sbjct: 15 LDTIAKNGTLRVAVPEDYPPFGSVGTDMQPQGYDIDMAGLLAKSLG---VKLKLVPVNSA 71 Query: 87 ERFLALQSKQIDILSRNTDWTLLRE--ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 R L + ++D++ + T RE I A+ P YF QG +S+ + L+ Sbjct: 72 NRIPYLTTNKVDMVISSLGKTPEREKVIDFSSAYAP--YF--QGVFGPSDVKVSTPADLT 127 Query: 145 GASICVQAGTTTELTLADYFKAHNMK 170 G ++ G E+ L+ +K Sbjct: 128 GKTVGATRGALEEIALSQLAPNATIK 153 >gi|294636988|ref|ZP_06715310.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Edwardsiella tarda ATCC 23685] gi|291089816|gb|EFE22377.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Edwardsiella tarda ATCC 23685] Length = 243 Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust. Identities = 37/160 (23%), Positives = 70/160 (43%), Gaps = 20/160 (12%) Query: 47 FAEVKANGDWKGFDVDFCRALSSAI-----FDDPSKIQYLPLNAKERFLALQSKQIDILS 101 F + A +GFD+D A+ + I F + S +P +L+ K+ID + Sbjct: 34 FEFMDAQNKMQGFDIDLANAICTQIKATCTFSNQSFDSLIP--------SLKFKRIDAVI 85 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 D T R+ + + +P Y+D + +K ++ V+ L G + +Q GTT + L Sbjct: 86 SGMDITPERQKQVDFS-QP--YYDNSALFIAEKGKVADVAALKGKRVGIQNGTTHQKYLM 142 Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 D + + P+ ++ + + R DA GD + + Sbjct: 143 D----KHPELTPVPYDSYQNAILDLKNGRIDAVFGDTAVV 178 >gi|330823278|ref|YP_004386581.1| ABC transporter periplasmic subunit [Alicycliphilus denitrificans K601] gi|329308650|gb|AEB83065.1| ABC-type transporter, periplasmic subunit family 3 [Alicycliphilus denitrificans K601] Length = 299 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 50/251 (19%), Positives = 101/251 (40%), Gaps = 6/251 (2%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K ++ ++ ++ + L IK G + G+ A +G + GF + Sbjct: 2 KKHLLAAAITVLAAGSAIAQANDTLAKIKSSGAITLGVRESSGALAYTLGDGKYVGFHTE 61 Query: 63 FC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 R L + +I+Y P+ ++ R + + +D+ +T L R+ + AF Sbjct: 62 MAERVARDLQKKLGLSKLEIKYQPVTSQNRIPLVVNGTVDLECGSTTNNLARQKDV--AF 119 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 TY + + GI+ + L+G +I GTT+ TL +A M + ++ + Sbjct: 120 ANTTYVEEVRIAVKANSGINDIKDLNGKTIVTTTGTTSVQTLRKNKRAEGMNFREVMGKD 179 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R DA+ D S L + P++ I+ + +S P+A + + D + Sbjct: 180 HADSFLMLETGRADAFIMDGSILAGNISKSKSPNDFKIVGEALSVEPIACMLRKDDPAFK 239 Query: 239 NIVSWTHYAMV 249 V + A + Sbjct: 240 KAVDESIVAQI 250 >gi|311280448|ref|YP_003942679.1| extracellular solute-binding protein family 3 [Enterobacter cloacae SCF1] gi|308749643|gb|ADO49395.1| extracellular solute-binding protein family 3 [Enterobacter cloacae SCF1] Length = 303 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 50/233 (21%), Positives = 89/233 (38%), Gaps = 6/233 (2%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQY 80 S L I K G + G V F+ G+ D+ A+ A+ + P +I+ Sbjct: 32 STLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQIKL 91 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 LP+ ++ R LQ+ D +T L R+ +F + G ++ K I Sbjct: 92 LPVTSQNRIPLLQNGTFDFECGSTTNNLERQQQA--SFSDTIFVIGTRLLVKKGSPIKDF 149 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L ++ V +GTT+E+ L M I + + + R A+ D + Sbjct: 150 PDLKDKTVVVTSGTTSEVLLHKLNDEKQMNMRIISAKDHGDSFRTLESGRAVAFMMDDAL 209 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 L + +P + VI+ SK + + D E+ ++ T T+ E Sbjct: 210 LAGERAKAKKPDDWVIVGTPQSKEAYGCMLRKNDPEFKKLMDDTISQAQTSGE 262 >gi|299069322|emb|CBJ40588.1| putative amino-acid-binding periplasmic abc transporter protein [Ralstonia solanacearum CMR15] Length = 280 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 36/153 (23%), Positives = 64/153 (41%), Gaps = 6/153 (3%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRAL 67 + L L SF A +I+K L+CG + FA + GFDVD C+AL Sbjct: 10 LTVLACLCAASFPVLADQWAEIQKNKELRCGTFADVPPFAAPDPKTREMVGFDVDLCQAL 69 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + + PL+ + R ++ ++D+ N +TL R + + F Y + Sbjct: 70 AKHLG---VAARITPLSVEARVPEVKMGRVDVTVANLAYTLGR--AEQIQFSDPYYLAKE 124 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 + S + G + G+T+EL++ Sbjct: 125 MLAVRASDPGKSKADYKGKRLAAAKGSTSELSI 157 >gi|295689321|ref|YP_003593014.1| extracellular solute-binding protein family 3 [Caulobacter segnis ATCC 21756] gi|295431224|gb|ADG10396.1| extracellular solute-binding protein family 3 [Caulobacter segnis ATCC 21756] Length = 261 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 6/153 (3%) Query: 7 VSILCLIILFFTSFSTNASILG--DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 +S L L +L ++ + G IK G L+ G+ F A+G GF+VDF Sbjct: 10 ISGLGLALLAACGKKPDSDVSGWDRIKASGTLRIGLEGTYPPFNFQGADGQLTGFEVDFA 69 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 +AL++ + P ++ P AL+S ++D++ T R+ + P T Sbjct: 70 KALAAQLGLKP---EFRPAPFAGLLGALESGRVDVVINQITITPDRKDKYDFS-EPYTIS 125 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157 Q + K G S+ +L+G + V GT E Sbjct: 126 GIQIITLKAKPGPSNPDELAGKKVGVGLGTNYE 158 >gi|56413131|ref|YP_150206.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197362057|ref|YP_002141694.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56127388|gb|AAV76894.1| cystine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197093534|emb|CAR58996.1| cystine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 266 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 49/224 (21%), Positives = 91/224 (40%), Gaps = 12/224 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 SF+ + +L +K+RG L G+ F+ +G GF+VDF AL+ + K Sbjct: 27 SFA-DEGLLNKVKERGTLLVGLEGTYPPFSFQGEDGKLTGFEVDFAEALAKHL---GVKA 82 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-I 137 P +L +K+ID++ + +R+ + P T Q + +G I Sbjct: 83 SLKPTKWDGILASLDAKRIDVVINQVTISDVRKKKYDFS-TPYTVSGVQALVKKGNEGTI 141 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + + L G + V GT E L + + +++ + + +++ R R DA Sbjct: 142 KTAADLQGKKVGVGLGTNYEEWLRQHVQGVDIRTYDDDLTKYQDL----RVGRIDAIL-- 195 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + L AL L + D S+ A+ +G+ + V Sbjct: 196 VDRLAALDLVKKTKGTLAVTGDAFSRQESGVALRKGNEDLLKAV 239 >gi|33591321|ref|NP_878965.1| amino-acid ABC transporter binding protein precursor [Bordetella pertussis Tohama I] gi|33570963|emb|CAE40435.1| amino-acid ABC transporter binding protein precursor [Bordetella pertussis Tohama I] Length = 299 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 47/229 (20%), Positives = 91/229 (39%), Gaps = 10/229 (4%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR----ALSSAIFDDPSKIQYLP 82 L IK G + G + F+ + G+ ++ C A+ + + K+ +P Sbjct: 26 LDKIKSSGTITIGHRDASIPFSYLDDKQKPIGYSMEICEKAVEAIKAKLGMAQIKVNLVP 85 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + + R + + +D++ + T+ R+ + AF P T+ F K + + Sbjct: 86 VTSSTRIPLVANGTVDLVCGSATNTVERQQQV--AFAPTTFVTATRFAAKKSSNLKKLDD 143 Query: 143 LSGASICVQAGTTTE--LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + G ++ AGT+ LT A+ + +M+ P + A R A+ D Sbjct: 144 MKGKTVVSTAGTSNIRWLTQANEKDSLDMRIIPTKDHPAAMLTVAN--GRAAAFFMDDVL 201 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 L L T +P E +I D + P A + + D + +V T M+ Sbjct: 202 LAGLVATERKPDEWMISEDTYTVEPYALILPKDDPAFKKVVDDTVTGMM 250 >gi|170293734|gb|ACB12919.1| glutamate-sensitive fluorescent reporter [synthetic construct] Length = 841 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 6/153 (3%) Query: 12 LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI 71 +++L F + + S L I K G + G V F+ G+ D+ A+ A+ Sbjct: 256 MVLLEFVTAARMLSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAV 315 Query: 72 ---FDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + P +++ +P+ + R LQ+ D +T + R+ AF + G Sbjct: 316 KKKLNKPDLQVKLIPITTQNRIPLLQNGTFDFECGSTTNNVERQKQA--AFSDTIFVVGT 373 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 + K I + L ++ V +GTT+E+ L Sbjct: 374 RLLTKKGGDIKDFANLKDKAVVVTSGTTSEVLL 406 >gi|15807633|ref|NP_294751.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Deinococcus radiodurans R1] Length = 250 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 5/118 (4%) Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F + AN GFD+D A++ + K+ + + +L +K+ D+++ Sbjct: 44 FETLDANNKVVGFDMDLLNAVAKHMATHGVKVNLVTQSFDGLVPSLLAKKADLIAAGMTV 103 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLAD 162 T R+ S+ + + Y G I+ +K GIS +S LSG ++ VQ GT E + D Sbjct: 104 TEERKKSVLFS---VPYISGPNAIVIRKDTPGISKLSDLSGKTVAVQLGTAQEKLVGD 158 >gi|238920409|ref|YP_002933924.1| arginine-binding periplasmic protein 1 [Edwardsiella ictaluri 93-146] gi|238869978|gb|ACR69689.1| arginine-binding periplasmic protein 1 [Edwardsiella ictaluri 93-146] Length = 243 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 37/160 (23%), Positives = 71/160 (44%), Gaps = 20/160 (12%) Query: 47 FAEVKANGDWKGFDVDFCRAL-----SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101 F + A +GFDVD A+ ++ F + S +P +L+ K+ID + Sbjct: 34 FEFMDAQNKMQGFDVDLANAICQQMKATCTFSNQSFDSLIP--------SLRFKRIDAVI 85 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 + D T R+ + + +P Y+D + +K ++ V+ L G + +Q GTT + L Sbjct: 86 SSMDITPERQKQVDFS-QP--YYDNSALFIAEKGKVADVAALKGKRVGIQNGTTHQKYLM 142 Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 D + + P+ ++ + + R DA GD + + Sbjct: 143 D----KHPELTPVPYDSYQNAILDLKNGRIDAVFGDTAVV 178 >gi|238027537|ref|YP_002911768.1| extracellular solute-binding protein, family 3 [Burkholderia glumae BGR1] gi|237876731|gb|ACR29064.1| Extracellular solute-binding protein, family 3 [Burkholderia glumae BGR1] Length = 264 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 41/176 (23%), Positives = 72/176 (40%), Gaps = 12/176 (6%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 A +L +K+RG L+ G+ F GD G+DVD +A+++ + P +++ Sbjct: 27 ADLLDQVKQRGTLRIGLEGTFPPFNSKSPQGDLVGYDVDIAKAVAAKLGVKP---EFVTT 83 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVS 141 LQ+ + D++ T R+ L F P + I K + S+ Sbjct: 84 EWSGIIAGLQAGKFDVIVNQVGVTDKRKEVLD--FSPAYTYSAAQLIQRKDDPRQFKSLD 141 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 L G + V GT + +A ++K +P E + ++ A R DA D Sbjct: 142 DLKGKKLGVGLGTNY-MDMAKSVPGIDVKTYPGAPEYLRDL----AAGRLDAALND 192 >gi|257063100|ref|YP_003142772.1| periplasmic component of amino acid ABC-type transporter/signal transduction system [Slackia heliotrinireducens DSM 20476] gi|256790753|gb|ACV21423.1| periplasmic component of amino acid ABC-type transporter/signal transduction system [Slackia heliotrinireducens DSM 20476] Length = 273 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 42/174 (24%), Positives = 72/174 (41%), Gaps = 17/174 (9%) Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 V NGD GFDV+ +A+ A+ P + Y ++ K L++++ + + S W Sbjct: 54 VDENGDAAGFDVEVLKAIDEAL---PQYEFTYETMDFKNILLSVETGKAQLGSHQFSWNE 110 Query: 109 LREISLGLAFRPITYFDGQGFIM--HKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 R P Y G +++ I S+ + G + ++ G +E + ++ +A Sbjct: 111 ERAQKYLYPETPFCY--GTMYLVAGADNDAIQSIDDMGGKIVTLETGDASEAQINEWNEA 168 Query: 167 H---NMKYHPIVFERVEEIDAAYRAHRCDA------YTGDISALYALKLTNDRP 211 H M + I EEI A R DA Y D++A Y L +P Sbjct: 169 HPDNPMTINWIDAPTPEEISAMISTGRTDAFCEMRSYVDDVNAEYGNTLKLVQP 222 >gi|325517962|gb|EGC97786.1| polar amino acid transporter substrate-binding protein [Burkholderia sp. TJI49] Length = 264 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 40/174 (22%), Positives = 72/174 (41%), Gaps = 12/174 (6%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 +L +K+RG L+ G+ F G+ GFDVD +A+++ + P +++ Sbjct: 29 LLDQVKQRGTLRIGLEGTFPPFNSKNPQGELVGFDVDIAKAIAAKLGVKP---EFVTTEW 85 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQL 143 LQ+ + D++ T R+ +L F P + I K + S+ L Sbjct: 86 SGIIAGLQAGKFDVIVNQVGITDARKQTLD--FSPAYTYSTAQLIQRKDDTRQFKSLEDL 143 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 G + V GT + +A ++K +P E + ++ A R DA D Sbjct: 144 KGKKLGVALGTNY-MDMAKSVPGIDVKTYPGAPEYLRDLAAG----RLDAALND 192 >gi|261339174|ref|ZP_05967032.1| hypothetical protein ENTCAN_05398 [Enterobacter cancerogenus ATCC 35316] gi|288319019|gb|EFC57957.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Enterobacter cancerogenus ATCC 35316] gi|295096440|emb|CBK85530.1| L-arginine-binding protein [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 243 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 52/202 (25%), Positives = 82/202 (40%), Gaps = 32/202 (15%) Query: 47 FAEVKANGDWKGFDVDFCRALSSAI-----FDDPSKIQYLPLNAKERFLALQSKQIDILS 101 F + AN GFDVD AL I F + + +P +L+ ++ID + Sbjct: 34 FESIDANNKIVGFDVDLANALCKEIDATCTFSNQAFDSLIP--------SLKFRRIDAVM 85 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 D T RE + L P Y+D + +K +SV L G + VQ GTT + + Sbjct: 86 AGMDITPEREKQV-LFTTP--YYDNSALFIGQKGKYASVDLLKGKKVGVQNGTTHQKFI- 141 Query: 162 DYFKAHNMKYHP----IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS---EH 214 M HP + ++ + + R DA GD + + ND+ + + Sbjct: 142 -------MDKHPEITTVPYDSYQNAKLDLQNGRIDAVFGDTAVVTEWLKANDKLAAVGDK 194 Query: 215 VILPDIISKSPLAPAIIQGDTE 236 V D + L A+ QG+TE Sbjct: 195 VTDKDYFG-TGLGIAVRQGNTE 215 >gi|167563743|ref|ZP_02356659.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia oklahomensis EO147] gi|167570891|ref|ZP_02363765.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia oklahomensis C6786] Length = 266 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 39/182 (21%), Positives = 78/182 (42%), Gaps = 8/182 (4%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F +++ ++ T+ + A +L +K+ G LK + F ++G +GFDVD Sbjct: 8 FTSAVVAALVGIATASAHAADLLDSVKQAGVLKIALEGTYPPFDYRNSDGQLEGFDVDVA 67 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 +A+++ + P Q++ LQ+ + D++ T R+ +L + +P Y Sbjct: 68 KAVAARLGVKP---QFVTTEWSGILAGLQAGKFDVIVNQVGITPARKQALDFS-QPYVYS 123 Query: 125 DGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Q I K + L G + V GT LA +++ +P E++ ++ Sbjct: 124 AAQ-LIQRADDKHDYGAPGALQGKRLGVTLGTNFA-DLAKTLPGVDVRTYPGAPEKLRDV 181 Query: 183 DA 184 A Sbjct: 182 SA 183 >gi|254247735|ref|ZP_04941056.1| Extracellular solute-binding protein, family 10 [Burkholderia cenocepacia PC184] gi|124872511|gb|EAY64227.1| Extracellular solute-binding protein, family 10 [Burkholderia cenocepacia PC184] Length = 342 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 41/194 (21%), Positives = 74/194 (38%), Gaps = 6/194 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQ 79 A L I++ + G V F+ V A G GF D C + +A+ K ++ Sbjct: 70 AGTLEKIRQSNLISIGHRETSVPFSYVDAGGKVIGFSQDLCDRVIAAVKARTGKPDLQVR 129 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 ++P+ ++ R +Q+ +D+ T R +AF + + GI Sbjct: 130 FIPVTSQNRIPLVQNGTVDLECGVTTNLAARHAQ--VAFSTTFFVATTRLLTRTTSGIRD 187 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L+G ++ GTT+E L + M I + E + R AY D Sbjct: 188 FPDLAGKTVVTNQGTTSERLLRKMNEEKKMNMQIISAKDYGEGRLTLESGRAAAYMMDDV 247 Query: 200 ALYALKLTNDRPSE 213 L ++ +P++ Sbjct: 248 LLAGVRQLAAKPAD 261 >gi|242238549|ref|YP_002986730.1| extracellular solute-binding protein family 3 [Dickeya dadantii Ech703] gi|242130606|gb|ACS84908.1| extracellular solute-binding protein family 3 [Dickeya dadantii Ech703] Length = 298 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 47/222 (21%), Positives = 87/222 (39%), Gaps = 6/222 (2%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQYLP 82 L +K G + G V F+ G+ D+ + A+ + P+ +++ +P Sbjct: 30 LQKVKDSGVIVIGHRESSVPFSYYDNQQKVVGYSQDYSDKIVEAVKKAVNAPNLQVKLIP 89 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R LQ+ D+ +T L R+ AF + G + K I S Sbjct: 90 ITSQNRIPLLQNGTFDLECGSTTNNLERQQQA--AFSNTIFVIGTRLLTKKGSDIKDFSD 147 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+G ++ V +GTT+E+ L + M I + + + R A+ D + L Sbjct: 148 LNGKAVVVTSGTTSEILLNKMNEEKKMNLRIISAKDHGDSFRTLESGRAVAFMMDDALLA 207 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + P E VI+ S + + D E+ +V T Sbjct: 208 GERAKAKNPDEWVIVGTPQSHEAYGCMLRKNDPEFKKLVDDT 249 >gi|118586387|ref|ZP_01543836.1| glutamine ABC transporter, glutamine-binding protein [Oenococcus oeni ATCC BAA-1163] gi|118433174|gb|EAV39891.1| glutamine ABC transporter, glutamine-binding protein [Oenococcus oeni ATCC BAA-1163] Length = 287 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 54/216 (25%), Positives = 93/216 (43%), Gaps = 24/216 (11%) Query: 9 ILCLIILF----FTSFSTNASILGD----IKKRGFLKCGI--NTGLVGFAEVKANGDWKG 58 IL L+I+F ++ + N S D +K+ G ++ G+ +T L G + K G +G Sbjct: 16 ILTLLIIFGVVSASALAENNSKHVDTWERVKRLGKIRWGVKADTKLFGLMDTKT-GQPEG 74 Query: 59 FDVDFCRALSSAIFDD---PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 FDVD +AL+ + P + + + + R L++ ID T RE + Sbjct: 75 FDVDIAKALTVQLSKQSGVPMQADFTIVTSNTRIQLLKNANIDGFIATATITPEREKVID 134 Query: 116 LAFRPITYFD-GQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYH 172 + +YF GQ ++ K GI S+ L S ++I G+ + + + + K Sbjct: 135 FSN---SYFKAGQSILVKKGSGIKSIKDLNNSKSTIIGVVGSNSVINVKKFAP----KAK 187 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 + + AA +A + A T D LY L N Sbjct: 188 VLALGDYGQAMAALKAGQGQALTTDNGILYGLATEN 223 >gi|15800618|ref|NP_286632.1| arginine 3rd transport system periplasmic binding protein [Escherichia coli O157:H7 EDL933] gi|15830200|ref|NP_308973.1| arginine 3rd transport system periplasmic binding protein [Escherichia coli O157:H7 str. Sakai] gi|168750052|ref|ZP_02775074.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC4113] gi|168756662|ref|ZP_02781669.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC4401] gi|168763282|ref|ZP_02788289.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC4501] gi|168767378|ref|ZP_02792385.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC4486] gi|168776409|ref|ZP_02801416.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC4196] gi|168779420|ref|ZP_02804427.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC4076] gi|168787089|ref|ZP_02812096.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC869] gi|168799850|ref|ZP_02824857.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC508] gi|195936912|ref|ZP_03082294.1| arginine 3rd transport system periplasmic binding protein [Escherichia coli O157:H7 str. EC4024] gi|208808622|ref|ZP_03250959.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC4206] gi|208816255|ref|ZP_03257434.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC4045] gi|208822439|ref|ZP_03262758.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC4042] gi|209397117|ref|YP_002269536.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC4115] gi|217324500|ref|ZP_03440584.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. TW14588] gi|254792062|ref|YP_003076899.1| arginine ABC transporter periplasmic-binding protein [Escherichia coli O157:H7 str. TW14359] gi|261225517|ref|ZP_05939798.1| arginine transporter subunit; periplasmic-binding component of ABC superfamily protein [Escherichia coli O157:H7 str. FRIK2000] gi|261258514|ref|ZP_05951047.1| arginine transporter subunit; periplasmic-binding component of ABC superfamily protein [Escherichia coli O157:H7 str. FRIK966] gi|291281865|ref|YP_003498683.1| Arginine ABC transporter periplasmic arginine-binding protein ArtI [Escherichia coli O55:H7 str. CB9615] gi|12513884|gb|AAG55242.1|AE005267_7 arginine 3rd transport system periplasmic binding protein [Escherichia coli O157:H7 str. EDL933] gi|13360405|dbj|BAB34369.1| arginine 3rd transport system periplasmic binding protein [Escherichia coli O157:H7 str. Sakai] gi|187768202|gb|EDU32046.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC4196] gi|188015722|gb|EDU53844.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC4113] gi|189002776|gb|EDU71762.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC4076] gi|189356239|gb|EDU74658.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC4401] gi|189363375|gb|EDU81794.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC4486] gi|189366498|gb|EDU84914.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC4501] gi|189373113|gb|EDU91529.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC869] gi|189377781|gb|EDU96197.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC508] gi|208728423|gb|EDZ78024.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC4206] gi|208732903|gb|EDZ81591.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC4045] gi|208737924|gb|EDZ85607.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC4042] gi|209158517|gb|ACI35950.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC4115] gi|209775298|gb|ACI85961.1| arginine 3rd transport system periplasmic binding protein [Escherichia coli] gi|209775300|gb|ACI85962.1| arginine 3rd transport system periplasmic binding protein [Escherichia coli] gi|209775302|gb|ACI85963.1| arginine 3rd transport system periplasmic binding protein [Escherichia coli] gi|209775304|gb|ACI85964.1| arginine 3rd transport system periplasmic binding protein [Escherichia coli] gi|209775306|gb|ACI85965.1| arginine 3rd transport system periplasmic binding protein [Escherichia coli] gi|217320721|gb|EEC29145.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. TW14588] gi|254591462|gb|ACT70823.1| arginine transporter subunit; periplasmic-binding component of ABC superfamily [Escherichia coli O157:H7 str. TW14359] gi|290761738|gb|ADD55699.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O55:H7 str. CB9615] gi|320192652|gb|EFW67293.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC1212] gi|320637733|gb|EFX07525.1| putative ABC transporter arginine-biding protein [Escherichia coli O157:H7 str. G5101] gi|320642856|gb|EFX12057.1| putative ABC transporter arginine-biding protein [Escherichia coli O157:H- str. 493-89] gi|320648313|gb|EFX16968.1| putative ABC transporter arginine-biding protein [Escherichia coli O157:H- str. H 2687] gi|320654151|gb|EFX22219.1| putative ABC transporter arginine-biding protein [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320659775|gb|EFX27331.1| putative ABC transporter arginine-biding protein [Escherichia coli O55:H7 str. USDA 5905] gi|320664245|gb|EFX31396.1| putative ABC transporter arginine-biding protein [Escherichia coli O157:H7 str. LSU-61] gi|326338243|gb|EGD62072.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. 1125] gi|326346220|gb|EGD69958.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. 1044] Length = 243 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 48/203 (23%), Positives = 83/203 (40%), Gaps = 34/203 (16%) Query: 47 FAEVKANGDWKGFDVDFCRALSSAI-----FDDPSKIQYLPLNAKERFLALQSKQIDILS 101 F + AN GFDVD +AL I F + + +P +L+ ++++ + Sbjct: 34 FESIDANNQIVGFDVDLAQALCKEIDATCTFSNQAFDSLIP--------SLKFRRVEAVM 85 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 D T RE + L P Y+D + ++ +SV QL G + VQ GTT + + Sbjct: 86 AGMDITAEREKQV-LFTTP--YYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFI- 141 Query: 162 DYFKAHNMKYHP----IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 M HP + ++ + + R D+ GD + + + D P + Sbjct: 142 -------MDKHPEITTVPYDSYQNAKLDLQNGRIDSVFGDTAVV--TEWLKDNPKLAAVG 192 Query: 218 PDIISK----SPLAPAIIQGDTE 236 + K + L A+ QG+TE Sbjct: 193 DKVTDKDYFGTGLGIAVRQGNTE 215 >gi|307299246|ref|ZP_07579047.1| extracellular solute-binding protein family 3 [Thermotogales bacterium mesG1.Ag.4.2] gi|306915042|gb|EFN45428.1| extracellular solute-binding protein family 3 [Thermotogales bacterium mesG1.Ag.4.2] Length = 255 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 53/228 (23%), Positives = 98/228 (42%), Gaps = 20/228 (8%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 S++ D+K+RG L+ G + G + +GD G +VD + ++ I D K++++ + Sbjct: 18 GSLIDDVKQRGVLRVGQDAGYMPLYGTNPDGDRIGLEVDILKKMAE-ILD--VKLEFVVV 74 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 N AL S + DI+ T+ E +L + F GQ + + K ++ Sbjct: 75 NWDGIIPALVSNKFDIIWSAM--TITPERALRVNFTDPYLTVGQIILYNTNKYELPPTEE 132 Query: 144 S----GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 I VQ G+T A+ + +FE ++E + R DA D Sbjct: 133 DLNDPDVKIAVQLGSTG----AEAANRLLSEAQIFMFETIDEAAFQVASGRADAMIFD-- 186 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE---WYN-IVSW 243 ++YA + + + + D++++ AI +GD E W N + W Sbjct: 187 SIYA-RFMAKKYDQLEVTEDLLTREDFGVAIPKGDFETLQWMNTFIQW 233 >gi|300362122|ref|ZP_07058299.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus gasseri JV-V03] gi|300354741|gb|EFJ70612.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus gasseri JV-V03] Length = 277 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 43/195 (22%), Positives = 78/195 (40%), Gaps = 10/195 (5%) Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 +T L G +K G +GF+VD +AL+ + +K +++ K R L++ ID + Sbjct: 52 DTRLFGLMSIKT-GKIEGFEVDLAKALTKQMLGKNAKAEFVQTTPKTRIPLLKNGNIDAI 110 Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 T R+ + F + GQ ++ I +V L+G + GTT Sbjct: 111 LATMTITPDRKKQ--VTFSEPYFTAGQSLLVKDNSTIKNVKDLNGKTALAVKGTTA---- 164 Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220 D K K + ++ + A +A + A T D L + N + ++ Sbjct: 165 VDNVKKFAPKAKVLEYDDYGQAFTALKAGQGQAMTTDNGLLAGIASEN---KGYKLVGGT 221 Query: 221 ISKSPLAPAIIQGDT 235 + P A+ +G T Sbjct: 222 YTSEPYGIAVEKGQT 236 >gi|160901196|ref|YP_001566778.1| extracellular solute-binding protein [Delftia acidovorans SPH-1] gi|160366780|gb|ABX38393.1| extracellular solute-binding protein family 3 [Delftia acidovorans SPH-1] Length = 286 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 49/202 (24%), Positives = 84/202 (41%), Gaps = 13/202 (6%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRA 66 I + L T +A+ L IK+RG + G+ N G G + + G++ + RA Sbjct: 22 IAAALALACTQARADAT-LDKIKQRGKVTIGVLVNGGPFGSID-PSTQQLVGWNPELARA 79 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + + +Q + R LQ+ ++D+L + + R +LG A P Y G Sbjct: 80 LAKGLGVEAELVQ---VQTATRVQFLQAGKVDLLIASMELNPDRAETLGYAPTPF-YRVG 135 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 + K GI+ L G +CV G++ LA + A Y + + A Sbjct: 136 GIAAVRKGSGIARWEDLRGKPVCVSQGSSFAKPLASEYGAQVHGY-----KSSSDSLLAL 190 Query: 187 RAHRCDAYTGDISALYALKLTN 208 + C A D + +Y L +N Sbjct: 191 KGGNCVAAVHDSTLIYPLLRSN 212 >gi|300715838|ref|YP_003740641.1| Glutamate/aspartate periplasmic-binding protein [Erwinia billingiae Eb661] gi|299061674|emb|CAX58790.1| Glutamate/aspartate periplasmic-binding protein [Erwinia billingiae Eb661] Length = 300 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 44/201 (21%), Positives = 79/201 (39%), Gaps = 6/201 (2%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS- 76 ++ + L I K G + G V F+ G+ D+ A+ +AI + P Sbjct: 25 ASQSPTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVAAIKAKLNKPDL 84 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 +++ LP+ ++ R LQ+ D +T L R+ AF + G ++ K Sbjct: 85 QVKMLPVTSQNRIPLLQNGTYDFECGSTTNNLERQKQA--AFSDTIFVIGTRLLVKKGSP 142 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 I L G ++ V +GTT+E+ L M I + + + R A+ Sbjct: 143 IKDFPDLKGKTVVVTSGTTSEILLNKLNDEKKMDMRIISAKDHGDSFRTLESGRAVAFMM 202 Query: 197 DISALYALKLTNDRPSEHVIL 217 D + L + +P VI+ Sbjct: 203 DDALLAGERAKAKKPDNWVIV 223 >gi|222082284|ref|YP_002541649.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221726963|gb|ACM30052.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 290 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 43/224 (19%), Positives = 96/224 (42%), Gaps = 13/224 (5%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + + S+L + G L+ + L ++ V A+G G+D+D + L++A+ +P ++ Sbjct: 47 AESGSVLQSVLSNGKLRIAVLGSLPPYSTVGADGVPVGYDIDIAKKLAAALKVEP---EF 103 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + + R +LQ+ ++D+ D+T E S +AF ++ + ++ Sbjct: 104 VVTDIPSRVTSLQTGKVDVTI--ADFTRNVERSTSVAFSNPYVVTNMRLLVPESAPYKTI 161 Query: 141 SQLSGASI--CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + + A I + G T E + AH + F + +A + + DA D Sbjct: 162 DEANAAKIRVAISRGGTAERAV----PAHLPNAQIVRFNTQADELSALLSGQVDAMAED- 216 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 Y K D + + ++++ +A + GD +W +++ Sbjct: 217 -DFYNRKAIGDNQGKLRQVDGSLARAEIAIGVPAGDADWLRVIN 259 >gi|16760900|ref|NP_456517.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29141408|ref|NP_804750.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|167552818|ref|ZP_02346569.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|168244801|ref|ZP_02669733.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168259762|ref|ZP_02681735.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|194444067|ref|YP_002041219.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194448487|ref|YP_002046005.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|198244762|ref|YP_002215132.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205352351|ref|YP_002226152.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207856532|ref|YP_002243183.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213053509|ref|ZP_03346387.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213426352|ref|ZP_03359102.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213616254|ref|ZP_03372080.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213650341|ref|ZP_03380394.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213855801|ref|ZP_03384041.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|289824076|ref|ZP_06543674.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25296353|pir||AD0750 cystine-binding periplasmic protein precursor [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16503197|emb|CAD05703.1| cystine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Typhi] gi|29137035|gb|AAO68599.1| cystine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|194402730|gb|ACF62952.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194406791|gb|ACF67010.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197939278|gb|ACH76611.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205272132|emb|CAR36985.1| cystine-binding periplasmic protein (FliY) [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205322644|gb|EDZ10483.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205336345|gb|EDZ23109.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205350934|gb|EDZ37565.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206708335|emb|CAR32638.1| cystine-binding periplasmic protein (FliY) [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|326622881|gb|EGE29226.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326627401|gb|EGE33744.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 266 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 50/224 (22%), Positives = 91/224 (40%), Gaps = 12/224 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 SF+ + +L +K+RG L G+ F+ +G GF+VDF AL+ + K Sbjct: 27 SFA-DEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVDFAEALAKHL---GVKA 82 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-I 137 P +L SK+ID++ + +R+ + P T Q + +G I Sbjct: 83 SLKPTKWDGMLASLDSKRIDVVINQVTISDVRKKKYDFS-TPYTVSGVQALVKKGNEGTI 141 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + + L G + V GT E L + + +++ + + +++ R R DA Sbjct: 142 KTAADLQGKKVGVGLGTNYEEWLRQHVQGVDIRTYDDDPTKYQDL----RVGRIDAIL-- 195 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + L AL L + D S+ A+ +G+ + V Sbjct: 196 VDRLAALDLVKKTKGTLAVTGDAFSRQESGVALRKGNEDLLKAV 239 >gi|159026223|emb|CAO86379.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 299 Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust. Identities = 45/220 (20%), Positives = 87/220 (39%), Gaps = 15/220 (6%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 V + C++ +F S S +++ + + GFL G + ++ V G+ G+ +D Sbjct: 7 LVGLGCILPMFLASASLAETVVEKVARTGFLTVGTRFDAIPYSYVNDKGELVGYSMDVLE 66 Query: 66 ALSSAI---FDDPSKIQYLPLNAK-ERFLALQSKQIDI-LSRNTDWTLLREISLGLAFRP 120 + + P +Q + N E+ ++S IDI S W + + +++ Sbjct: 67 RIRKRLETRLGRPVTLQMIEANQPGEKINLIRSGDIDIACSTAFTWERAKVVDFSISYS- 125 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI-VFERV 179 G + K +S+ L G I + + D K + + + V Sbjct: 126 ---ISGIRILAKKGSNLSTPQSLIGKRIALVPTSAA----VDVIKLVQPQATIVTTYSTV 178 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219 EE A + + DA GD +L A + D P + I+P+ Sbjct: 179 EEALEALKTGKIDAIAGDSISL-AGTILRDNPKIYEIVPE 217 >gi|77461680|ref|YP_351187.1| extracellular solute-binding protein [Pseudomonas fluorescens Pf0-1] gi|77385683|gb|ABA77196.1| amino acid ABC transporter substrate-binding protein, PAAT family [Pseudomonas fluorescens Pf0-1] Length = 261 Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust. Identities = 53/243 (21%), Positives = 96/243 (39%), Gaps = 31/243 (12%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L D+ KRG LK + F V + +G D+D + L+ + K++ P+N+ Sbjct: 28 LDDVVKRGTLKVAVPQDFPPFGSVGPDMKPRGLDIDTAKLLAEQLK---VKLELTPVNST 84 Query: 87 ERFLALQSKQIDILSRNTDWTLLRE--ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 R L + ++D++ + RE I A+ P Y +S++ L Sbjct: 85 NRIPFLTTGKVDLVISSLGKNPEREKVIDFSRAYAPF-YL---AVFGPPDAAVSTLDDLK 140 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHP--IVFERVEEID---AAYRAHRCDAYTGDIS 199 G +I V G ++ L K P + +R E+ + AAY A + D Sbjct: 141 GKTISVTRGAIEDIELT--------KVAPEGVTIKRFEDNNSTIAAYLAGQVDLIASGNV 192 Query: 200 ALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 + A+ N + P+ V L D +P + + ++ + + TA+ G Sbjct: 193 VMVAISEKNPKRVPALKVKLKD-------SPVYVGVNKNEPALLGKVNEILTTAKADGAL 245 Query: 258 QKN 260 +KN Sbjct: 246 EKN 248 >gi|82777621|ref|YP_403970.1| arginine 3rd transport system periplasmic binding protein [Shigella dysenteriae Sd197] gi|309785094|ref|ZP_07679727.1| arginine-binding periplasmic protein 1 [Shigella dysenteriae 1617] gi|81241769|gb|ABB62479.1| arginine 3rd transport system periplasmic binding protein [Shigella dysenteriae Sd197] gi|308927464|gb|EFP72938.1| arginine-binding periplasmic protein 1 [Shigella dysenteriae 1617] Length = 243 Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust. Identities = 48/203 (23%), Positives = 82/203 (40%), Gaps = 34/203 (16%) Query: 47 FAEVKANGDWKGFDVDFCRALSSAI-----FDDPSKIQYLPLNAKERFLALQSKQIDILS 101 F + AN GFDVD +AL I F + + +P +L+ ++++ + Sbjct: 34 FESIDANNQIVGFDVDLAQALCKEIDATCTFSNQAFDSLIP--------SLKFRRVEAVM 85 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 D T RE + L P Y+D + ++ +SV QL G + VQ GTT + + Sbjct: 86 AGMDITPEREKQV-LFTTP--YYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFI- 141 Query: 162 DYFKAHNMKYHP----IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 M HP + ++ + + R D GD + + + D P + Sbjct: 142 -------MDKHPEITTVPYDSYQNAKLDLQNGRIDGVFGDTAVV--TEWLKDNPKLEAVG 192 Query: 218 PDIISK----SPLAPAIIQGDTE 236 + K + L A+ QG+TE Sbjct: 193 DKVTDKDYFGTGLGIAVRQGNTE 215 >gi|161502924|ref|YP_001570036.1| cystine transporter subunit [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160864271|gb|ABX20894.1| hypothetical protein SARI_00983 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 282 Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust. Identities = 49/224 (21%), Positives = 92/224 (41%), Gaps = 12/224 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 SF+ + +L +++RG L G+ F+ +G GF+VDF AL+ + K Sbjct: 43 SFA-DEGLLNKVRERGTLLVGLEGTYPPFSFQGDDGKLTGFEVDFAEALAKHL---GVKA 98 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-I 137 P +L SK+ID++ + +R+ + P T Q + +G I Sbjct: 99 SLKPTKWDGMLASLDSKRIDVVINQVTISDVRKKKYDFS-TPYTVSGVQALVKKGNEGTI 157 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + ++L G + V GT E L + + +++ + + +++ R R DA Sbjct: 158 KTAAELQGKKVGVGLGTNYEEWLRQHVQGVDIRTYDDDPTKYQDL----RVGRIDAIL-- 211 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + L AL L + D S+ A+ +G+ + V Sbjct: 212 VDRLAALDLVKKTKGTLAVTGDAFSRQESGVALRKGNEDLLKAV 255 >gi|319792374|ref|YP_004154014.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] gi|315594837|gb|ADU35903.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] Length = 296 Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust. Identities = 49/264 (18%), Positives = 102/264 (38%), Gaps = 20/264 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M ++ + +LF + + A L I + G + V F+ + GF Sbjct: 1 MKLSVLMASMAAAVLFTATGAQAADTLAKIAESGKITLAYRESSVPFSYLDGPNKPIGFS 60 Query: 61 VDFCRALSSAI---FDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 V+ A+ A+ + P+ ++ + + ++ R + + +D+ +T R + Sbjct: 61 VELSNAVVEAVKKKLNKPNLQVSLMAVTSQNRIPLITNGTVDLECGSTTNNTAR--GKDV 118 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM------- 169 AF ++ G + K I + L+ ++ GTT L + Y N+ Sbjct: 119 AFAVNHFYTGTRLLTKKSSKIKDYADLAKKTVASTTGTTNALVMRKYNTEKNLGMDIVLG 178 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 K H F VE + R A+ D L+ L + P+++ ++ + + P A Sbjct: 179 KDHADAFLLVE-------SDRAVAFAMDDILLFGLIANSKNPADYEVVGESLQVEPYACM 231 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEE 253 + + D + +V T M+ + E Sbjct: 232 LPKDDPAFKKLVDDTFIGMMKSGE 255 >gi|206560608|ref|YP_002231373.1| periplasmic glutamate/aspartate-binding protein [Burkholderia cenocepacia J2315] gi|198036650|emb|CAR52548.1| periplasmic glutamate/aspartate-binding protein [Burkholderia cenocepacia J2315] Length = 306 Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust. Identities = 40/191 (20%), Positives = 74/191 (38%), Gaps = 6/191 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQYLP 82 L I++ + G V F+ V A+G GF D C + +A+ K ++++P Sbjct: 37 LEKIRQANLISIGHRETSVPFSYVDASGKVIGFSQDLCERVIAAVKARTGKPDLQVRFIP 96 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R +Q+ +D+ T R +AF + + GI Sbjct: 97 VTSQNRIPLVQNGTVDLECGVTTNLAARHAQ--VAFSTTFFVATTRLLTRTTSGIRDFPD 154 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+G ++ GTT+E L + M I + E + R AY D L Sbjct: 155 LAGKTVVTNQGTTSERLLRKMNEEKKMNMQIISAKDYGEGRLTLESGRAAAYMMDDVLLA 214 Query: 203 ALKLTNDRPSE 213 ++ +P++ Sbjct: 215 GVRQLAAKPAD 225 >gi|17544803|ref|NP_518205.1| amino-acid-binding periplasmic (PBP) ABC transporter protein [Ralstonia solanacearum GMI1000] gi|17427092|emb|CAD13612.1| probable amino-acid-binding periplasmic (pbp) abc transporter protein [Ralstonia solanacearum GMI1000] Length = 301 Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust. Identities = 39/194 (20%), Positives = 73/194 (37%), Gaps = 6/194 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQYLP 82 L I+ + G+ + F+ + GF D C + A+ K +Q +P Sbjct: 32 LKKIQDSNTILIGVRESSIPFSYRDSKNQIIGFSADLCSRVIDAVKQKVGKPDLQVQQIP 91 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R +Q+ +D+ T T L+ AF + + G+ Sbjct: 92 VTSQNRTALVQNGSVDLECGVT--THLKSREQQTAFSTTFFIAATRLLTSTHSGVKDFPD 149 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+G S+ AGTT+E L M + I + E ++ R A+ D L Sbjct: 150 LAGKSVITNAGTTSERILRKMNDEKKMNMNVISGKDYGESFLTLQSGRVQAFMMDDVLLA 209 Query: 203 ALKLTNDRPSEHVI 216 + +P++ V+ Sbjct: 210 GARTLAQKPADWVV 223 >gi|330816747|ref|YP_004360452.1| Extracellular solute-binding protein, family 3 [Burkholderia gladioli BSR3] gi|327369140|gb|AEA60496.1| Extracellular solute-binding protein, family 3 [Burkholderia gladioli BSR3] Length = 264 Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust. Identities = 42/184 (22%), Positives = 76/184 (41%), Gaps = 12/184 (6%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 F + S A +L + K+RG L+ G+ F +G+ G+DVD +A+++ + P Sbjct: 19 FVAATSHAADLLDEAKQRGTLRIGLEGTFPPFNSKAPSGELVGYDVDIAKAVAAKLGLKP 78 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK- 134 +++ LQ+ + D++ T R+ L F P + I K Sbjct: 79 ---EFVTTEWSGIIAGLQAGKFDVIVNQVGVTDKRKEVLD--FSPAYTYSAAQLIQRKDD 133 Query: 135 -KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 + S+ L G + V GT + +A ++K +P E + ++ A R DA Sbjct: 134 TRNFKSLDDLKGKKLGVGLGTNY-MDMAKSVPGIDVKTYPGAPEYLRDL----AAGRLDA 188 Query: 194 YTGD 197 D Sbjct: 189 ALND 192 >gi|320178445|gb|EFW53413.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Shigella boydii ATCC 9905] Length = 302 Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust. Identities = 47/234 (20%), Positives = 90/234 (38%), Gaps = 6/234 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 S L I K G + G V F+ G+ D+ A+ A+ + P +++ Sbjct: 30 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ AF + G + K I Sbjct: 90 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQTQA--AFSDTIFVVGTRLLTKKGGDIKD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L G ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 148 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 207 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 L + +P I+ S+ + + D ++ ++ T M T+ E Sbjct: 208 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQMQTSGE 261 >gi|332108217|gb|EGJ09441.1| extracellular solute-binding protein [Rubrivivax benzoatilyticus JA2] Length = 295 Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust. Identities = 49/236 (20%), Positives = 89/236 (37%), Gaps = 16/236 (6%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP---- 82 L +K G + + F+ + GF + C I D+ K+ P Sbjct: 26 LDKVKASGAIGVAYRESSIPFSYLDDKAQPVGFGFEIC----GRIVDEVKKVTGRPDLKV 81 Query: 83 ----LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF-DGQGFIMHKKKGI 137 + + R L + IDI +T R + A I YF G F++ GI Sbjct: 82 NLQSVTSANRIPLLVNGTIDIECGSTTNNSDRAKQVAFA---INYFYTGTRFLVRSDSGI 138 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 S++ L+G + GTT L + + + I + E ++ R A+ D Sbjct: 139 KSLADLNGKVLVSTTGTTNFRILRNLISENKLPIELIGAKDHAEAALLVQSGRAAAFGMD 198 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 LY L+ ++ P+E ++ + I P A + + D + +V ++ + E Sbjct: 199 DILLYGLRASSANPAELAVVGESIQVEPYAIMVRKDDPAFKQLVDGVLAGLMKSGE 254 >gi|313902716|ref|ZP_07836114.1| extracellular solute-binding protein family 3 [Thermaerobacter subterraneus DSM 13965] gi|313467013|gb|EFR62529.1| extracellular solute-binding protein family 3 [Thermaerobacter subterraneus DSM 13965] Length = 293 Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust. Identities = 37/142 (26%), Positives = 69/142 (48%), Gaps = 12/142 (8%) Query: 21 STNASILGDIKKRGFLKCGINTGL--VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 S S+L +IK+RG++ + + F + + + GFD+D +A++ + + Sbjct: 58 SGEKSLLDEIKERGYMTFATDGAYPPMEFPDPENPSELIGFDIDLGKAIAEKL---GVEH 114 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD-GQGFIMHK--KK 135 + + ++ L+S + D++ + + T R+ S + YF+ GQ ++ K K Sbjct: 115 RAVVVDWDGILAGLESGRYDVVMSSMNITEERQKSADF----VQYFEMGQMIVVAKGNPK 170 Query: 136 GISSVSQLSGASICVQAGTTTE 157 GI S+ L G I VQ GTT E Sbjct: 171 GIHSLDDLKGKVIAVQIGTTNE 192 >gi|22124840|ref|NP_668263.1| solute-binding protein of ABC transporter [Yersinia pestis KIM 10] gi|45440527|ref|NP_992066.1| putative amino acid ABC transporter periplasmic protein [Yersinia pestis biovar Microtus str. 91001] gi|108808739|ref|YP_652655.1| putative amino acid ABC transporter periplasmic protein [Yersinia pestis Antiqua] gi|108811004|ref|YP_646771.1| amino acid ABC transporter, periplasmic protein [Yersinia pestis Nepal516] gi|145600152|ref|YP_001164228.1| amino acid ABC transporter, periplasmic protein [Yersinia pestis Pestoides F] gi|149364902|ref|ZP_01886937.1| putative amino acid ABC transporter, periplasmic protein [Yersinia pestis CA88-4125] gi|165926628|ref|ZP_02222460.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165936051|ref|ZP_02224621.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia pestis biovar Orientalis str. IP275] gi|166011108|ref|ZP_02232006.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166212982|ref|ZP_02239017.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167398531|ref|ZP_02304055.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421596|ref|ZP_02313349.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423593|ref|ZP_02315346.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167468796|ref|ZP_02333500.1| amino acid ABC transporter, periplasmic protein [Yersinia pestis FV-1] gi|218930282|ref|YP_002348157.1| putative amino acid ABC transporter periplasmic protein [Yersinia pestis CO92] gi|229838868|ref|ZP_04459027.1| putative amino acid ABC transporter, periplasmic protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229896361|ref|ZP_04511530.1| putative amino acid ABC transporter, periplasmic protein [Yersinia pestis Pestoides A] gi|229899437|ref|ZP_04514580.1| putative amino acid ABC transporter, periplasmic protein [Yersinia pestis biovar Orientalis str. India 195] gi|229901223|ref|ZP_04516345.1| putative amino acid ABC transporter, periplasmic protein [Yersinia pestis Nepal516] gi|270489411|ref|ZP_06206485.1| bacterial extracellular solute-binding protein, family 3 [Yersinia pestis KIM D27] gi|294504973|ref|YP_003569035.1| putative amino acid ABC transporter, periplasmic protein [Yersinia pestis Z176003] gi|21957669|gb|AAM84514.1|AE013696_7 putative solute-binding protein of ABC transporter [Yersinia pestis KIM 10] gi|45435384|gb|AAS60943.1| putative amino acid ABC transporter, periplasmic protein [Yersinia pestis biovar Microtus str. 91001] gi|108774652|gb|ABG17171.1| amino acid ABC transporter, periplasmic protein [Yersinia pestis Nepal516] gi|108780652|gb|ABG14710.1| putative amino acid ABC transporter, periplasmic protein [Yersinia pestis Antiqua] gi|115348893|emb|CAL21850.1| putative amino acid ABC transporter, periplasmic protein [Yersinia pestis CO92] gi|145211848|gb|ABP41255.1| amino acid ABC transporter, periplasmic protein [Yersinia pestis Pestoides F] gi|149291315|gb|EDM41389.1| putative amino acid ABC transporter, periplasmic protein [Yersinia pestis CA88-4125] gi|165916196|gb|EDR34803.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia pestis biovar Orientalis str. IP275] gi|165921556|gb|EDR38753.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165990108|gb|EDR42409.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166205769|gb|EDR50249.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166960515|gb|EDR56536.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051035|gb|EDR62443.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057763|gb|EDR67509.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229681152|gb|EEO77246.1| putative amino acid ABC transporter, periplasmic protein [Yersinia pestis Nepal516] gi|229687839|gb|EEO79912.1| putative amino acid ABC transporter, periplasmic protein [Yersinia pestis biovar Orientalis str. India 195] gi|229695234|gb|EEO85281.1| putative amino acid ABC transporter, periplasmic protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700637|gb|EEO88667.1| putative amino acid ABC transporter, periplasmic protein [Yersinia pestis Pestoides A] gi|262363037|gb|ACY59758.1| putative amino acid ABC transporter, periplasmic protein [Yersinia pestis D106004] gi|262366961|gb|ACY63518.1| putative amino acid ABC transporter, periplasmic protein [Yersinia pestis D182038] gi|270337915|gb|EFA48692.1| bacterial extracellular solute-binding protein, family 3 [Yersinia pestis KIM D27] gi|294355432|gb|ADE65773.1| putative amino acid ABC transporter, periplasmic protein [Yersinia pestis Z176003] gi|320016446|gb|ADW00018.1| putative amino acid ABC transporter, periplasmic protein [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 262 Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust. Identities = 31/153 (20%), Positives = 68/153 (44%), Gaps = 5/153 (3%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 L +++ + + A L I++RG L+ + F V + +G+D+D + L+ Sbjct: 10 LWAVLVLVQAPAVLADQLEKIQQRGVLRVAVPQDFPPFGSVGTDLQPQGYDIDMAQYLAD 69 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 + K+Q + + + R LQ+ ++D++ + RE ++ + +F G Sbjct: 70 KM---KLKLQLVSVTSANRVPYLQTDKVDLVISSLGKNPEREKAIAFSRAYAPFF--LGV 124 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162 K + QL+G +I V G ++ L++ Sbjct: 125 FGAKDDELKQPEQLAGKTIGVTRGAVEDMVLSE 157 >gi|116491605|ref|YP_811149.1| amino acid ABC transporter periplasmic protein [Oenococcus oeni PSU-1] gi|116092330|gb|ABJ57484.1| amino acid ABC transporter substrate-binding protein, PAAT family [Oenococcus oeni PSU-1] Length = 287 Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust. Identities = 54/216 (25%), Positives = 93/216 (43%), Gaps = 24/216 (11%) Query: 9 ILCLIILF----FTSFSTNASILGD----IKKRGFLKCGI--NTGLVGFAEVKANGDWKG 58 IL L+I+F ++ + N S D +K+ G ++ G+ +T L G + K G +G Sbjct: 16 ILTLLIIFGVVSASALAENNSKHVDTWERVKRLGKIRWGVKADTKLFGLMDTKT-GQPEG 74 Query: 59 FDVDFCRALSSAIFDD---PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 FDVD +AL+ + P + + + + R L++ ID T RE + Sbjct: 75 FDVDIAKALTVQLSKQSGVPMQADFTIVTSNTRIQLLKNANIDGFIATATITPEREKVID 134 Query: 116 LAFRPITYFD-GQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYH 172 + +YF GQ ++ K GI S+ L S ++I G+ + + + + K Sbjct: 135 FSN---SYFKAGQSILVKKGSGIKSIKDLNNSKSTIIGVVGSNSVINVKKFAP----KAK 187 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 + + AA +A + A T D LY L N Sbjct: 188 VLALGDYGQAMAALKAGQGQALTTDNGILYGLATEN 223 >gi|172063791|ref|YP_001811442.1| extracellular solute-binding protein [Burkholderia ambifaria MC40-6] gi|171996308|gb|ACB67226.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MC40-6] Length = 266 Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust. Identities = 40/180 (22%), Positives = 77/180 (42%), Gaps = 14/180 (7%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 S A +L +K+ G LK + F A G +GFDVD +A+++ + P Q+ Sbjct: 24 SHAADLLDTVKQAGVLKIALEGTYPPFDYRNAEGQLEGFDVDVAKAVAARLGVKP---QF 80 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK---KGI 137 + LQ+ + D++ T R+ +L + P + Q ++ ++ + Sbjct: 81 VTTEWSGILAGLQAGKFDVIVNQVAITPSRQQALDFSM-PYVFSSAQ--LLQRRNDTRAF 137 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 S+ +L G + V G+ + L A +++ +P E + ++ A R DA D Sbjct: 138 KSLDELKGKKVGVTMGSNY-VDLVKTVPAIDLQVYPGTPENLRDLAAG----RIDAAVND 192 >gi|299770480|ref|YP_003732506.1| Glutamate/aspartate periplasmic-binding protein precursor [Acinetobacter sp. DR1] gi|298700568|gb|ADI91133.1| Glutamate/aspartate periplasmic-binding protein precursor [Acinetobacter sp. DR1] Length = 297 Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust. Identities = 53/244 (21%), Positives = 94/244 (38%), Gaps = 7/244 (2%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 +S L + TS A L IK G + G + V A G G+ VD C Sbjct: 8 LIISTFMLCTVGATSQIQAADTLAKIKSSGKIVIGHRESSDPISYVVA-GKPVGYAVDIC 66 Query: 65 RALSSAIFDD---PS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ I + P K++Y + + R L + ID+ T + R+ +G F Sbjct: 67 NQFANDIKKELKMPGLKVEYKAVTSSTRIPELLAGNIDMECGTTTNSKQRQEQVG--FST 124 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + GI S++ L+G ++ GTT++ + K ++ I + Sbjct: 125 NYYATEVRMAVKANSGIKSLADLNGKAVVTTQGTTSDKYIKMNEKGQSINVQNIYGKDHA 184 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A + R A+ D + L L + P I+ ++S P + + D ++ I Sbjct: 185 DSFAMMASGRAAAFVMDDNILAGLVAKSSTPKAFAIVGPVLSSEPYGIMLAKDDPKFKAI 244 Query: 241 VSWT 244 T Sbjct: 245 ADRT 248 >gi|107026160|ref|YP_623671.1| extracellular solute-binding protein [Burkholderia cenocepacia AU 1054] gi|116692656|ref|YP_838189.1| extracellular solute-binding protein [Burkholderia cenocepacia HI2424] gi|170738094|ref|YP_001779354.1| extracellular solute-binding protein [Burkholderia cenocepacia MC0-3] gi|105895534|gb|ABF78698.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia AU 1054] gi|116650656|gb|ABK11296.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia HI2424] gi|169820282|gb|ACA94864.1| extracellular solute-binding protein family 3 [Burkholderia cenocepacia MC0-3] Length = 298 Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust. Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 16/153 (10%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD-------PS-KI 78 L IK G + GI V F+ D + ++ + R ++S + D P+ + Sbjct: 29 LKKIKDTGVVSLGIRESSVPFSY----SDNQQKNIGYSRDIASRVIDQLKTELNLPNLAV 84 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + +P+ ++ R LQ+ ID +T TL R+ AF + G F K G+ Sbjct: 85 KEIPITSQNRIPLLQNGTIDFECGSTTNTLERQRQA--AFSNSIFLYGIRFSTRKDSGVK 142 Query: 139 SVSQLSGASICVQAGTTTELTLA--DYFKAHNM 169 + L+G ++ AGT+ E L + KA NM Sbjct: 143 DFADLAGKTVATTAGTSDERLLRKLNEEKAMNM 175 >gi|290891212|ref|ZP_06554274.1| hypothetical protein AWRIB429_1664 [Oenococcus oeni AWRIB429] gi|290479176|gb|EFD87838.1| hypothetical protein AWRIB429_1664 [Oenococcus oeni AWRIB429] Length = 287 Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust. Identities = 54/216 (25%), Positives = 93/216 (43%), Gaps = 24/216 (11%) Query: 9 ILCLIILF----FTSFSTNASILGD----IKKRGFLKCGI--NTGLVGFAEVKANGDWKG 58 IL L+I+F ++ + N S D +K+ G ++ G+ +T L G + K G +G Sbjct: 16 ILTLLIIFGVVSASALAENNSKHVDTWERVKRLGKIRWGVKADTKLFGLMDTKT-GQPEG 74 Query: 59 FDVDFCRALSSAIFDD---PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 FDVD +AL+ + P + + + + R L++ ID T RE + Sbjct: 75 FDVDIAKALTVQLSKQSGVPMQADFTIVTSNTRIQLLKNANIDGFIATATITPEREKVID 134 Query: 116 LAFRPITYFD-GQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYH 172 + +YF GQ ++ K GI S+ L S ++I G+ + + + + K Sbjct: 135 FSN---SYFKAGQSILVKKGSGIKSIKDLNNSKSTIIGVVGSNSVINVKKFAP----KAK 187 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 + + AA +A + A T D LY L N Sbjct: 188 VLALGDYGQAMAALKAGQGQALTTDNGILYGLATEN 223 >gi|86610271|ref|YP_479033.1| amino acid transporter, periplasmic amino acid-binding protein [Synechococcus sp. JA-2-3B'a(2-13)] gi|86558813|gb|ABD03770.1| amino acid transporter, periplasmic amino acid-binding protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 309 Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust. Identities = 32/145 (22%), Positives = 55/145 (37%), Gaps = 2/145 (1%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 T A +I G L+ + L GD +GF+++ L S + ++ Sbjct: 64 IPTVARPWPEIVDSGRLRVAVKDNLRPLGFRTPQGDLQGFEIELACELGSRLLGSAEAVE 123 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P++ ER L Q+D+ T R + + F Y DG ++ + S Sbjct: 124 LVPVSNVERLQVLADGQVDLAIAQIGITPDR--ARQVEFTSAYYQDGPSLVVARSHNWES 181 Query: 140 VSQLSGASICVQAGTTTELTLADYF 164 S L G + V G++ L Y Sbjct: 182 WSDLRGGRVAVLRGSSAIPLLNRYL 206 >gi|107028647|ref|YP_625742.1| extracellular solute-binding protein [Burkholderia cenocepacia AU 1054] gi|116690194|ref|YP_835817.1| extracellular solute-binding protein [Burkholderia cenocepacia HI2424] gi|105897811|gb|ABF80769.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia AU 1054] gi|116648283|gb|ABK08924.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia HI2424] Length = 306 Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust. Identities = 40/194 (20%), Positives = 74/194 (38%), Gaps = 6/194 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQ 79 A L +++ + G V F+ V A G GF D C + +A+ K ++ Sbjct: 34 AGTLDKVRQSNLISIGHRETSVPFSYVDAGGKVIGFSQDLCDRVIAAVKARTGKPDLQVR 93 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 ++P+ ++ R +Q+ +D+ T R +AF + + GI Sbjct: 94 FIPVTSQNRIPLVQNGTVDLECGVTTNLAARHAQ--VAFSTTFFVATTRLLTRTTSGIRD 151 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L+G ++ GTT+E L + M I + E + R AY D Sbjct: 152 FPDLAGKTVVTNQGTTSERLLRKMNEEKKMNMQIISAKDYGEGRLTLESGRAAAYMMDDV 211 Query: 200 ALYALKLTNDRPSE 213 L ++ +P++ Sbjct: 212 LLAGVRQLAAKPAD 225 >gi|320535311|ref|ZP_08035431.1| bacterial extracellular solute-binding protein, family 3 [Treponema phagedenis F0421] gi|320147843|gb|EFW39339.1| bacterial extracellular solute-binding protein, family 3 [Treponema phagedenis F0421] Length = 273 Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust. Identities = 38/182 (20%), Positives = 72/182 (39%), Gaps = 5/182 (2%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 ++ GF+ G+ L +G G+D+D A + + KI+ ++ E+ Sbjct: 38 VRVNGFITVGVGDPLPPLISYSLSGYMVGYDIDLLEAAAKKLH---LKIKVKAISWDEKE 94 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 L S ++D ++ T RE AF D Q + I + L I Sbjct: 95 AILDSGEVDCIASGLSITPDREEIY--AFTQPYLKDAQVIVTLDSAAIFTFDDLVDKCIG 152 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 +Q G+T L ++ + KY + + ++ A + DA ++ +Y++ L Sbjct: 153 IQKGSTAAGLLKEHLEEKAGKYSILELDEFMDLLVALENKKTDAIVVNLLTIYSMILREH 212 Query: 210 RP 211 RP Sbjct: 213 RP 214 >gi|302866037|ref|YP_003834674.1| family 3 extracellular solute-binding protein [Micromonospora aurantiaca ATCC 27029] gi|315502596|ref|YP_004081483.1| extracellular solute-binding protein family 3 [Micromonospora sp. L5] gi|302568896|gb|ADL45098.1| extracellular solute-binding protein family 3 [Micromonospora aurantiaca ATCC 27029] gi|315409215|gb|ADU07332.1| extracellular solute-binding protein family 3 [Micromonospora sp. L5] Length = 311 Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust. Identities = 34/140 (24%), Positives = 62/140 (44%), Gaps = 8/140 (5%) Query: 22 TNASILGD-----IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 T+A++ G IK G + G+ A G GFD++ + ++S + DP+ Sbjct: 56 TDANVAGSPAFEKIKSAGKVVIGVKFDQPNLGYKDAQGKRCGFDIEIAQYVASTLGVDPA 115 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KK 135 KI+Y + + R A++ +ID T R+ ++F + GQ ++ K + Sbjct: 116 KIEYKEIASANRETAIKGGEIDYYVGTYSITDKRKND--VSFAGPYFVAGQDLLVRKDES 173 Query: 136 GISSVSQLSGASICVQAGTT 155 I+ L G +C G+T Sbjct: 174 SITGKDTLKGKKVCSATGST 193 >gi|254248250|ref|ZP_04941570.1| Extracellular solute-binding protein, family 3 [Burkholderia cenocepacia PC184] gi|124874751|gb|EAY64741.1| Extracellular solute-binding protein, family 3 [Burkholderia cenocepacia PC184] Length = 298 Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust. Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 16/153 (10%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD-------PS-KI 78 L IK G + GI V F+ D + ++ + R ++S + D P+ + Sbjct: 29 LKKIKDTGVVSLGIRESSVPFSY----SDNQQKNIGYSRDIASRVIDQLKTELNLPNLAV 84 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + +P+ ++ R LQ+ ID +T TL R+ AF + G F K G+ Sbjct: 85 KEIPITSQNRIPLLQNGTIDFECGSTTNTLERQRQA--AFSNSIFLYGIRFSTRKDSGVK 142 Query: 139 SVSQLSGASICVQAGTTTELTLA--DYFKAHNM 169 + L+G ++ AGT+ E L + KA NM Sbjct: 143 DFADLAGKTVATTAGTSDERLLRKLNEEKAMNM 175 >gi|271499291|ref|YP_003332316.1| family 3 extracellular solute-binding protein [Dickeya dadantii Ech586] gi|270342846|gb|ACZ75611.1| extracellular solute-binding protein family 3 [Dickeya dadantii Ech586] Length = 260 Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust. Identities = 58/253 (22%), Positives = 107/253 (42%), Gaps = 33/253 (13%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M+K F+ + +IIL +T++ + ++G ++ G++ F NG+ GF+ Sbjct: 1 MFKKLFI-VPAIIIL-----ATSSVVFA---RQGVIRIGVDLAYSPFQTRDVNGNPAGFE 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ ++ +K Y+ + AL +++ID++S +E + F Sbjct: 52 IDITDAICKSV---NAKCDYIVNTFDAQIPALLARKIDVISPLAVTPKRKE---AIDFSH 105 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYF--KAHNMKYHPIVFE 177 + F+ K + V +L G +I VQ GT E Y+ N+K +P Sbjct: 106 YLFHVPTRFVARKGSSLLPQVDKLRGKNIAVQQGTIQETYANKYWLPAGVNVKSYP---- 161 Query: 178 RVEEIDAAY---RAHRCD-AYTGDISALYALKLTNDRPSEHVILPDIISKSPL----APA 229 + DA Y RA R D A +S +++ T + P+I A Sbjct: 162 ---DQDAIYEDLRAGRVDGALCPSVSLIFSFLQTPQGKDFELKGPEITDDGLFSIGSAYG 218 Query: 230 IIQGDTEWYNIVS 242 I +GDTE +++ Sbjct: 219 IRKGDTETQQLLN 231 >gi|170683620|ref|YP_001742971.1| arginine ABC transporter periplasmic arginine-binding protein ArtI [Escherichia coli SMS-3-5] gi|170521338|gb|ACB19516.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli SMS-3-5] Length = 243 Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust. Identities = 48/203 (23%), Positives = 84/203 (41%), Gaps = 34/203 (16%) Query: 47 FAEVKANGDWKGFDVDFCRALSSAI-----FDDPSKIQYLPLNAKERFLALQSKQIDILS 101 F + AN GFDVD +AL I F + + + +P +L+ ++++ + Sbjct: 34 FESIDANNQIVGFDVDLAQALCKEIDATCTFSNQAFDRLIP--------SLKFRRVEAVM 85 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 D T RE + L P Y+D + ++ +SV QL G + VQ GTT + + Sbjct: 86 AGMDITPEREKQV-LFTTP--YYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFI- 141 Query: 162 DYFKAHNMKYHP----IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 M HP + ++ + + R D+ GD + + + D P + Sbjct: 142 -------MDKHPEITTVPYDSYQNAKLDLQNGRIDSVFGDTAVV--TEWLKDNPKLAAVG 192 Query: 218 PDIISK----SPLAPAIIQGDTE 236 + K + L A+ QG+TE Sbjct: 193 DKVTDKDYFGTGLGIAVRQGNTE 215 >gi|91784493|ref|YP_559699.1| ABC glutamate/aspartate transporter, periplasmic ligand binding protein [Burkholderia xenovorans LB400] gi|91688447|gb|ABE31647.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia xenovorans LB400] Length = 292 Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust. Identities = 38/166 (22%), Positives = 65/166 (39%), Gaps = 2/166 (1%) Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 K+ + + + R L + QID+ +T T+ RE + Y I K G Sbjct: 77 KVHEITVTSSNRTPMLLNNQIDLECGSTTHTVERESVAAFSDSFFQY--AVRMIARKSSG 134 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 I+ L+G ++ AGT+ E L ++ E A + R A+ Sbjct: 135 ITDFQDLAGKTVVTTAGTSDERLLRRLNTDKHLNMRITSARDHLEAFGAVKDDRAVAFVM 194 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 D +Y K T+ RP + V+ + A +GD + N+V+ Sbjct: 195 DEPIVYGFKSTDPRPDDFVVTGTPLGYEVYACMFRKGDEPFRNLVN 240 >gi|222032592|emb|CAP75331.1| Arginine-binding periplasmic protein 1 [Escherichia coli LF82] gi|312945380|gb|ADR26207.1| arginine transporter subunit; periplasmic-binding component of ABC superfamily protein [Escherichia coli O83:H1 str. NRG 857C] Length = 243 Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust. Identities = 49/203 (24%), Positives = 83/203 (40%), Gaps = 34/203 (16%) Query: 47 FAEVKANGDWKGFDVDFCRALSSAI-----FDDPSKIQYLPLNAKERFLALQSKQIDILS 101 F + AN GFDVD +AL I F + + +P +L+ ++I+ + Sbjct: 34 FESIDANNQIVGFDVDLAQALCKEIDATCTFSNQAFDSLIP--------SLKFRRIEAVM 85 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 D T RE + L P Y+D + ++ +SV QL G + VQ GTT + + Sbjct: 86 AGMDITPEREKQV-LFTTP--YYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFI- 141 Query: 162 DYFKAHNMKYHP----IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 M HP + ++ + + R D+ GD + + + D P + Sbjct: 142 -------MDKHPEITTVPYDSYQNAKLDLQNGRIDSVFGDTAVV--TEWLKDNPKLAAVG 192 Query: 218 PDIISK----SPLAPAIIQGDTE 236 + K + L A+ QG+TE Sbjct: 193 DKVTDKDYFGTGLGIAVRQGNTE 215 >gi|33598570|ref|NP_886213.1| amino-acid ABC transporter binding protein precursor [Bordetella parapertussis 12822] gi|33603520|ref|NP_891080.1| amino-acid ABC transporter binding protein precursor [Bordetella bronchiseptica RB50] gi|33574699|emb|CAE39356.1| amino-acid ABC transporter binding protein precursor [Bordetella parapertussis] gi|33577644|emb|CAE34909.1| amino-acid ABC transporter binding protein precursor [Bordetella bronchiseptica RB50] Length = 299 Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust. Identities = 48/229 (20%), Positives = 88/229 (38%), Gaps = 10/229 (4%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS----KIQYLP 82 L IK G + G + F+ + G+ ++ C AI K+ +P Sbjct: 26 LDKIKSSGTITIGHRDASIPFSYLDDKQKPIGYSMEICEKAVEAIKAKLGMAQIKVNLVP 85 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + + R + + +D++ + T+ R+ + AF P T+ F K + + Sbjct: 86 VTSSTRIPLVANGTVDLVCGSATNTVERQQQV--AFAPTTFVTATRFAAKKSSNLKKLDD 143 Query: 143 LSGASICVQAGTTTE--LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + G ++ AGT+ LT A+ +M+ P + A R A+ D Sbjct: 144 MKGKTVVSTAGTSNIRWLTQANEKDGLDMRIIPTKDHPAAMLTVAN--GRAAAFFMDDVL 201 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 L L T +P E +I D + P A + + D + +V T M+ Sbjct: 202 LAGLVATERKPDEWMISEDTYTVEPYALILPKDDPAFKKVVDDTVTGMM 250 >gi|330812507|ref|YP_004356969.1| putative ABC transporter, periplasmic component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380615|gb|AEA71965.1| putative ABC transporter, periplasmic component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 261 Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust. Identities = 54/250 (21%), Positives = 94/250 (37%), Gaps = 21/250 (8%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 L +A L D+ KRG LK + F V + +G D+D + L+ + Sbjct: 16 LMLCQLPAHADGLEDVVKRGTLKVAVPQDFPPFGSVGPDMKPRGLDIDTAKLLADQLK-- 73 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE--ISLGLAFRPITYFDGQGFIMH 132 K++ P+N+ R L + ++D++ + RE I A+ P Y G Sbjct: 74 -VKLELTPVNSTNRIPFLTTGKVDLVISSLGKNPEREKVIDFSSAYAPF-YLAVFG---P 128 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 I+++ L G +I V G ++ L FE AAY A + D Sbjct: 129 PDAAINNLDDLKGKTISVTRGAIEDIELTKVAPEGTTIKR---FEDNNSTIAAYLAGQVD 185 Query: 193 AYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 + A+ N + P+ V L D +P + + ++ + + T Sbjct: 186 LIASGNVVMVAISERNPKRVPALKVKLKD-------SPVYVGVNKNEPALLEKVNQILAT 238 Query: 251 AEELGITQKN 260 A+ G +KN Sbjct: 239 AKTDGSLEKN 248 >gi|304317592|ref|YP_003852737.1| extracellular solute-binding protein family 3 [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302779094|gb|ADL69653.1| extracellular solute-binding protein family 3 [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 258 Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust. Identities = 40/161 (24%), Positives = 71/161 (44%), Gaps = 9/161 (5%) Query: 1 MYKDFFVSILCLIIL-FFTSFSTNASILGDIKKRGFLKCGINTGLVGF---AEVKANGDW 56 M K +S+ +++L S + S L +KK G + G + F V Sbjct: 1 MKKVLIISLSLIVMLSIILSGCSKQSTLSRVKKSGVIVMGTSADFPPFEFHKVVNGKDTI 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFDVD A++ + K++ ++ ALQS QID+ + T R+ ++ Sbjct: 61 MGFDVDLANAIAKKL---GVKLEIKDMDFTGLIPALQSGQIDMAIAGMNATPDRKKNVD- 116 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157 F Y Q ++ I+++ L+G ++ VQ GTT++ Sbjct: 117 -FSDEYYNSEQVLVVKSSSSINNLKDLNGKTVAVQLGTTSD 156 >gi|28211918|ref|NP_782862.1| sensory transduction protein kinase [Clostridium tetani E88] gi|28204361|gb|AAO36799.1| sensory transduction protein kinase [Clostridium tetani E88] Length = 673 Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust. Identities = 48/204 (23%), Positives = 93/204 (45%), Gaps = 26/204 (12%) Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F + N ++ GFDVD RALS ++Q+ P+N ++ L++ +ID++ Sbjct: 57 FEYMGDNKNYTGFDVDIVRALSLTC---GFEVQFYPMNWEKACEKLKNGEIDLIQ---GM 110 Query: 107 TLLREISLGLAFRPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165 ++E F + + Q FI+++ G+ L G + +Q G Sbjct: 111 KKIQEREKEYDFSKPYFQNNQSIFILNENLGLYKYEDLKGKKVALQKGDVA--------- 161 Query: 166 AHNMKYH---PIVFERVEEIDAAYR--AHRCDAYTGDISALYALKLTND-RPSEHVILPD 219 +N+K IVF + +E DA R + DAY G+ L + N +++ + D Sbjct: 162 INNLKALGDVNIVFTKDQE-DALKRLLNKKVDAYIGN--TLTGVNYINKLEIRDNIKIVD 218 Query: 220 I-ISKSPLAPAIIQGDTEWYNIVS 242 + I+ + + A+ +G+ E +I++ Sbjct: 219 VPINSTEYSIAVKKGNVELLDIIN 242 >gi|186472290|ref|YP_001859632.1| extracellular solute-binding protein [Burkholderia phymatum STM815] gi|184194622|gb|ACC72586.1| extracellular solute-binding protein family 3 [Burkholderia phymatum STM815] Length = 259 Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust. Identities = 44/163 (26%), Positives = 76/163 (46%), Gaps = 16/163 (9%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL-NAKERFL-ALQ 93 L+ GI F A+G +GFDVD A+ + + K++ + + NA + + ALQ Sbjct: 27 LRFGIEAAYPPFESKSASGQLEGFDVDVGNAVCAKL-----KMKCVWVENAFDGLIPALQ 81 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQA 152 +++ D+++ + T R+ S +AF P Y I G+ V L G + V Sbjct: 82 ARKFDVINSAMNITSKRKES--IAFTPPIYIVPIVMIAKHGSGLKPDVKNLQGKHVGVLQ 139 Query: 153 GTTTELTLADYFKAH--NMKYHPIVFERVEEIDAAYRAHRCDA 193 G++ E D+ KAH N + ++ +++ A A R DA Sbjct: 140 GSSQE----DFLKAHWANAGVQVVSYQDQDQVYADLVAGRLDA 178 >gi|226331009|ref|ZP_03806527.1| hypothetical protein PROPEN_04939 [Proteus penneri ATCC 35198] gi|225201804|gb|EEG84158.1| hypothetical protein PROPEN_04939 [Proteus penneri ATCC 35198] Length = 287 Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust. Identities = 42/210 (20%), Positives = 85/210 (40%), Gaps = 9/210 (4%) Query: 58 GFDVDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ D+ + A+ D K ++ +P+ ++ R LQ+ D +T R+ Sbjct: 49 GYSQDYSNLIVQAVKDKIGKPNLQVRLIPITSQNRIPLLQNGTFDFECGSTTNNEARQQQ 108 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 +F + G + K GI + LSG ++ V +GTT+E+ L M Sbjct: 109 A--SFSNTIFIVGTRLLAKKDSGIKDFADLSGKNVVVTSGTTSEMLLNKLNDEKKMNMRI 166 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + + + R A+ D + L + +P E I+ S+ + + Sbjct: 167 ISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPGEWEIVGTPQSEEAYGCMLRKD 226 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 D ++ ++ T + A++ G +K+ N+ Sbjct: 227 DAQFKALIDET---IANAQKSGEAEKSFNR 253 >gi|221197837|ref|ZP_03570883.1| extracellular solute-binding protein, family 3 [Burkholderia multivorans CGD2M] gi|221204605|ref|ZP_03577622.1| extracellular solute-binding protein, family 3 [Burkholderia multivorans CGD2] gi|221213036|ref|ZP_03586012.1| extracellular solute-binding protein, family 3 [Burkholderia multivorans CGD1] gi|221167249|gb|EED99719.1| extracellular solute-binding protein, family 3 [Burkholderia multivorans CGD1] gi|221175462|gb|EEE07892.1| extracellular solute-binding protein, family 3 [Burkholderia multivorans CGD2] gi|221181769|gb|EEE14170.1| extracellular solute-binding protein, family 3 [Burkholderia multivorans CGD2M] Length = 264 Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust. Identities = 40/174 (22%), Positives = 72/174 (41%), Gaps = 12/174 (6%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 +L +K+RG L+ G+ F G+ GFDVD +A+++ + P +++ Sbjct: 29 LLDQVKQRGTLRIGLEGTFPPFNSKNPQGELVGFDVDIAKAVAAKLGVKP---EFVTTEW 85 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQL 143 LQ+ + D++ T R+ +L F P + I K + S+ L Sbjct: 86 SGIIAGLQAGKFDVIVNQVGITDKRKETLD--FSPAYTYSSAQLIQRKDDTRQFKSLEDL 143 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 G + V GT + +A ++K +P E + ++ A R DA D Sbjct: 144 KGKKLGVALGTNY-MDMAKSVPGIDVKTYPGAPEYLRDLAAG----RLDAALND 192 >gi|83747889|ref|ZP_00944921.1| ABC transporter amino acid-binding protein [Ralstonia solanacearum UW551] gi|207739279|ref|YP_002257672.1| amino-acid-binding periplasmic protein [Ralstonia solanacearum IPO1609] gi|83725422|gb|EAP72568.1| ABC transporter amino acid-binding protein [Ralstonia solanacearum UW551] gi|206592652|emb|CAQ59558.1| amino-acid-binding periplasmic protein [Ralstonia solanacearum IPO1609] Length = 280 Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust. Identities = 54/251 (21%), Positives = 103/251 (41%), Gaps = 19/251 (7%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRAL 67 + L L SF A +I+K L+CG + FA + + GFDVD C AL Sbjct: 10 LTVLACLCAASFPVLADQWAEIQKNKELRCGTFADVPPFAAPDQKTREMVGFDVDMCNAL 69 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + + PL+ + R ++ ++D+ N +TL R + + F Y + Sbjct: 70 AKRMG---VTAKITPLSVEARVPEVKMGRVDVTVANLAYTLGR--AEQIQFSDPYYLAKE 124 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 + S + G + G+T+EL++ K + P+ F ++ +AY Sbjct: 125 MLAVRASDPGKSKADYKGKRLASAKGSTSELSI----KMNG--SEPVTF---QDTGSAYM 175 Query: 188 AHRCDAYTGDIS-ALYALKLTNDRPSEHV---ILPDIISKSPLAPAIIQGDTEWYNIVSW 243 A + G +S + KL N + + ++ + + P+ + +G+ + V+ Sbjct: 176 AVQQGKALGIVSNTMTITKLVNQSKTSGIELKVIAEPMIYQPIGVGMKKGEPQLLAKVNE 235 Query: 244 THYAMVTAEEL 254 AM A E+ Sbjct: 236 ALLAMDKAGEI 246 >gi|254254170|ref|ZP_04947487.1| ABC-type amino acid transport/signal transduction systems periplasmic component [Burkholderia dolosa AUO158] gi|124898815|gb|EAY70658.1| ABC-type amino acid transport/signal transduction systems periplasmic component [Burkholderia dolosa AUO158] Length = 298 Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust. Identities = 47/192 (24%), Positives = 76/192 (39%), Gaps = 15/192 (7%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD-------PS-KI 78 L IK G + GI V F+ D + ++ + R +++ I D PS + Sbjct: 29 LKKIKDTGVVSLGIRESSVPFSY----SDNQQKNIGYSRDIAARIIDQLKTELNVPSLTV 84 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + +P+ ++ R LQ+ ID +T TL R+ AF + G F K G+ Sbjct: 85 KEIPITSQNRIPLLQNGTIDFECGSTTNTLERQKQA--AFSNSIFLYGIRFSTRKDSGVK 142 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 L+G ++ AGT+ E L + M I + E R A+ D Sbjct: 143 DFPDLAGKTVATTAGTSDERLLRKLNEEKGMNMTIISAKDHAEAFMNVTTGRAVAFVMDE 202 Query: 199 SALYALKLTNDR 210 LY ++ DR Sbjct: 203 PLLYG-EIAKDR 213 >gi|241662510|ref|YP_002980870.1| family 3 extracellular solute-binding protein [Ralstonia pickettii 12D] gi|309781092|ref|ZP_07675830.1| ABC transporter [Ralstonia sp. 5_7_47FAA] gi|240864537|gb|ACS62198.1| extracellular solute-binding protein family 3 [Ralstonia pickettii 12D] gi|308920158|gb|EFP65817.1| ABC transporter [Ralstonia sp. 5_7_47FAA] Length = 303 Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust. Identities = 49/232 (21%), Positives = 90/232 (38%), Gaps = 20/232 (8%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD---PS- 76 +++ +L I+ G ++ V F+ A+ G+ +D C + + D P Sbjct: 28 ASSTPVLDRIRDTGAVRVAYRESSVPFSFYDADKKPIGYAMDLCLRVVDKLRTDLKRPDL 87 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 K+QY+ + R A+ + D+ +T T RE +AF Y G ++ G Sbjct: 88 KVQYVMVTPSTRMPAIIEGKADLECGST--TNNRERREKVAFTIPHYIAGIRMLVKTSSG 145 Query: 137 ISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKY-----HPIVFERVEEIDAAYRAH 189 I L + EL + + NM + H F VE Sbjct: 146 IRKWDDLRGKTVVTTKGTTSVAELRKMNDVRVLNMNFLEAKDHAESFAMVE-------TG 198 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + DA+ D LY + P ++ ++ D+++ P A + + DTE+ +V Sbjct: 199 KADAFAMDDVLLYGFRANTKTPGDYAVVGDMLTVEPYAIMLSKDDTEFKRLV 250 >gi|297199735|ref|ZP_06917132.1| sugar-binding protein [Streptomyces sviceus ATCC 29083] gi|297147474|gb|EDY57926.2| sugar-binding protein [Streptomyces sviceus ATCC 29083] Length = 350 Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust. Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 3/102 (2%) Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 D +GFD+D ++ I DP +Q+ + +R A+Q ++D++ R R Sbjct: 120 DLEGFDIDLVHRIAQDILGDPKAVQFKAIPTNQRIPAIQKGRVDMVVRTMTINCKRLAD- 178 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSV-SQLSGASICVQAGTT 155 +AF + GQ + K I L+ IC G+T Sbjct: 179 -VAFSAPYFKTGQQVLAPKSSDIKGYDGTLAHKKICTAEGST 219 >gi|171743317|ref|ZP_02919124.1| hypothetical protein BIFDEN_02448 [Bifidobacterium dentium ATCC 27678] gi|171278931|gb|EDT46592.1| hypothetical protein BIFDEN_02448 [Bifidobacterium dentium ATCC 27678] Length = 270 Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust. Identities = 31/135 (22%), Positives = 62/135 (45%), Gaps = 4/135 (2%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 G ++ GI G K NG + GFDVD + ++ + +I + +K+R LQ Sbjct: 28 GKIRIGIKFDQPGLG-FKKNGTYVGFDVDVAKYVAKKLGYSEDQIVWKEAPSKQREAMLQ 86 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQA 152 + +D + +++ E ++F + GQ ++ K + I L+G +C Sbjct: 87 NGDVDFIVAT--YSITDERKKVVSFAGPYFVAGQDLLVRKDETSIKGPEDLNGKRLCSVT 144 Query: 153 GTTTELTLADYFKAH 167 G+T+ +T+ + F + Sbjct: 145 GSTSAVTVKEKFASE 159 >gi|308186225|ref|YP_003930356.1| Arginine-binding periplasmic protein precursor [Pantoea vagans C9-1] gi|308056735|gb|ADO08907.1| Arginine-binding periplasmic protein precursor [Pantoea vagans C9-1] Length = 243 Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 16/121 (13%) Query: 47 FAEVKANGDWKGFDVDFCRALSSAI-----FDDPSKIQYLPLNAKERFLALQSKQIDILS 101 F V A+ +GFDVD AL I F + + +P +L+ ++ D + Sbjct: 34 FEFVDADNKIQGFDVDLANALCKEIDATCTFTNQAFDSLIP--------SLKFRRFDAVM 85 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 D T RE + L +P Y+D + +K ++SV L G + VQ GTT + LA Sbjct: 86 AGMDITPDREKQV-LFTKP--YYDNSALFVAQKGKVASVEALKGKRVGVQNGTTHQKYLA 142 Query: 162 D 162 D Sbjct: 143 D 143 >gi|300705512|ref|YP_003747115.1| glutamate/aspartate ABC transporter periplasmic-binding protein [Ralstonia solanacearum CFBP2957] gi|299073176|emb|CBJ44534.1| glutamate/aspartate transport protein; ABC superfamily, periplasmic binding component [Ralstonia solanacearum CFBP2957] Length = 301 Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust. Identities = 38/194 (19%), Positives = 73/194 (37%), Gaps = 6/194 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQYLP 82 L I+ + G+ + F+ + GF D C + A+ K +Q +P Sbjct: 32 LKKIQDSNTILIGVREASIPFSYRDSKNQIVGFSADLCARVIEAVKQKVGKPDLQVQQIP 91 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R +Q+ +D+ T T L+ AF + + G+ Sbjct: 92 VTSQNRTALVQNGSVDLECGVT--THLKSREQQTAFSTTFFIAATRLLTSVNSGVKDFPD 149 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+G S+ AGTT+E L M + + + E ++ R A+ D L Sbjct: 150 LAGKSVITNAGTTSERILRKMNDEKKMNMNVVSGKDYGESFLTLQSGRVQAFMMDDVLLA 209 Query: 203 ALKLTNDRPSEHVI 216 + +P++ V+ Sbjct: 210 GARTLAQKPADWVV 223 >gi|254422605|ref|ZP_05036323.1| Bacterial extracellular solute-binding protein, family 3 [Synechococcus sp. PCC 7335] gi|196190094|gb|EDX85058.1| Bacterial extracellular solute-binding protein, family 3 [Synechococcus sp. PCC 7335] Length = 299 Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust. Identities = 49/229 (21%), Positives = 97/229 (42%), Gaps = 40/229 (17%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L I++ G +K + + F V + + G+D+D + ++ + ++++ +P+ Sbjct: 60 LEQIRESGQVKVAVPSDFPPFGFVNTSMEPIGYDIDMAKEIAKGL---NAELEIIPVVGG 116 Query: 87 ERFLALQSKQIDI----LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 R LQ+ ++D+ L +N + L+ + S A +F IS++ Sbjct: 117 YRIPFLQTDRVDMIISSLGKNDERDLIIDFSEPYA----PFF--SAIYGGPTADISTIED 170 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID-----------AAYRAHRC 191 LSG SI V G+ +L ++ + E + +D +A + + Sbjct: 171 LSGRSIGVAQGSLEDLEISS------------LTEDISNVDIKRYANNSLTASALVSGQV 218 Query: 192 DAY-TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 DA TG++ A KL D P + I+ SP + +GDTE+ + Sbjct: 219 DAIATGNV---VAAKLIRDNPGSEITSKFILKDSPCYVGVREGDTEFVD 264 >gi|67643524|ref|ZP_00442269.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia mallei GB8 horse 4] gi|166998513|ref|ZP_02264371.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia mallei PRL-20] gi|167847286|ref|ZP_02472794.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei B7210] gi|254178914|ref|ZP_04885568.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein, truncation [Burkholderia mallei ATCC 10399] gi|254202701|ref|ZP_04909064.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia mallei FMH] gi|254208041|ref|ZP_04914391.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia mallei JHU] gi|147746948|gb|EDK54025.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia mallei FMH] gi|147751935|gb|EDK59002.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia mallei JHU] gi|160694828|gb|EDP84836.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein, truncation [Burkholderia mallei ATCC 10399] gi|238524887|gb|EEP88317.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia mallei GB8 horse 4] gi|243065198|gb|EES47384.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia mallei PRL-20] Length = 262 Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust. Identities = 48/219 (21%), Positives = 88/219 (40%), Gaps = 9/219 (4%) Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQYLPLNAKERFLALQSKQIDIL 100 + F+ N G+ DF + A+ + P+ +++ +P+ ++ R +Q+ +DI Sbjct: 11 IPFSYYDQNQQVVGYSRDFQMKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIE 70 Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 +T L R+ AF + G + K GI + L G ++ AGTT+E L Sbjct: 71 CGSTTNNLDRQKQA--AFSDTIFVIGTRLMTKKDSGIKDFADLKGKTVVTTAGTTSERLL 128 Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220 + + M I + E R A+ D + L + +P E VI+ Sbjct: 129 REMNNKNQMGMSIISAKDHGESFQTLETGRAVAFMMDDALLAGERAKAKQPGEWVIVGKP 188 Query: 221 ISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 S+ + + D + +V A+V E+ G K Sbjct: 189 QSQEAYGCMMRKDDPAFKKVVD---DAIVQVEKSGEAAK 224 >gi|111225073|ref|YP_715867.1| putative glutamate ABC transporter glutamate binding protein [Frankia alni ACN14a] gi|111152605|emb|CAJ64346.1| putative glutamate binding protein of ABC transporter system [Frankia alni ACN14a] Length = 330 Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust. Identities = 42/196 (21%), Positives = 84/196 (42%), Gaps = 9/196 (4%) Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 +G +GFDV+ ++ A+ K+ ++ + R +Q ++D++ +T+ + Sbjct: 110 SGKPEGFDVEIAEIITDALGIPRDKVNFVETVSANREPFIQQGRVDMVVAT--YTINDKR 167 Query: 113 SLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 + F Y GQ ++ KK I+ L+G +C +G+T + A + Sbjct: 168 KKVVDFAGPYYVAGQSIMVAKKNTDITGKDSLAGKKVCSVSGSTPAENIRKVAPAAQL-- 225 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 ++F+ + A + + DA T D L L L + P ++ +K P I Sbjct: 226 --VLFDVYSKCADALKNGQVDAVTTDNVIL--LGLIDKDPDAFKLVGGTFTKEPYGIGIK 281 Query: 232 QGDTEWYNIVSWTHYA 247 +GDT + ++ T A Sbjct: 282 KGDTAFRTFINDTLEA 297 >gi|300697547|ref|YP_003748208.1| amino-acid-binding periplasmic abc transporter protein [Ralstonia solanacearum CFBP2957] gi|299074271|emb|CBJ53816.1| putative amino-acid-binding periplasmic abc transporter protein [Ralstonia solanacearum CFBP2957] Length = 280 Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust. Identities = 55/251 (21%), Positives = 102/251 (40%), Gaps = 19/251 (7%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRAL 67 + L L SF A +I+K L+CG + FA + GFDVD C AL Sbjct: 10 LTVLACLCSASFPVLADQWAEIQKNKELRCGTFADVPPFAAPDPKTREMVGFDVDMCNAL 69 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + + PL+ + R ++ ++D+ N +TL R + + F Y + Sbjct: 70 AKRMG---VTAKITPLSVEARVPEVKMGRVDVTVANLAYTLSR--AEQIQFSDPYYLAKE 124 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 + S + G + G+T+EL++ K + P+ F ++ +AY Sbjct: 125 MLAVRASDPGKSKADYKGKRLASAKGSTSELSI----KMNG--SEPVTF---QDTGSAYM 175 Query: 188 AHRCDAYTGDIS-ALYALKLTNDRPS---EHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 A + G +S + KL N + E ++ + + P+ + +G+ + V+ Sbjct: 176 AVQQGKALGIVSNTMTITKLVNQSKTGGIELKVIAEPMIYQPIGVGMKKGEPQLLAKVNE 235 Query: 244 THYAMVTAEEL 254 AM A E+ Sbjct: 236 ALLAMDKAGEI 246 >gi|323969573|gb|EGB64861.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli TA007] Length = 243 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 48/203 (23%), Positives = 82/203 (40%), Gaps = 34/203 (16%) Query: 47 FAEVKANGDWKGFDVDFCRALSSAI-----FDDPSKIQYLPLNAKERFLALQSKQIDILS 101 F + AN GFDVD +AL I F + + +P +L+ ++++ + Sbjct: 34 FESIDANNQIVGFDVDLAQALCKEIDATCTFSNQAFDSLIP--------SLKFRRVEAVM 85 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 D T RE + L P Y+D + ++ +SV QL G + VQ GTT + + Sbjct: 86 AGMDITPEREKQV-LFTNP--YYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFI- 141 Query: 162 DYFKAHNMKYHP----IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 M HP + ++ + + R D GD + + + D P + Sbjct: 142 -------MDKHPEITTVPYDSYQNAKLDLQNGRIDGVFGDTAVV--TEWLKDNPKLAAVG 192 Query: 218 PDIISK----SPLAPAIIQGDTE 236 + K + L A+ QG+TE Sbjct: 193 DKVTDKDYFGTGLGIAVRQGNTE 215 >gi|318060368|ref|ZP_07979091.1| sugar-binding protein [Streptomyces sp. SA3_actG] Length = 375 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 34/140 (24%), Positives = 60/140 (42%), Gaps = 11/140 (7%) Query: 33 RGFLKCGI--NTGLVGF--AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 RG L G+ N+ GF + N D +GFD+D A++ + DP + + R Sbjct: 120 RGKLVVGVDQNSYRWGFRNPQRDGNNDIEGFDIDLAHAIAKDLLGDPDALVLRAIPTNRR 179 Query: 89 FLALQSKQIDILSRNTDWTL--LREISLGLAFRPITYFDGQGFIMHKKKGISSV-SQLSG 145 A+ +D++ R T L+++S + T Q I+ + + + L+G Sbjct: 180 VQAVADHDVDMVVRTMTITCRRLKDVSFSTPYFRTT----QRIIVPRGSSVDGFNASLTG 235 Query: 146 ASICVQAGTTTELTLADYFK 165 +C +T E L + FK Sbjct: 236 KRLCSADSSTAENVLTEGFK 255 >gi|283455710|ref|YP_003360274.1| glutamate-binding protein gluB [Bifidobacterium dentium Bd1] gi|283102344|gb|ADB09450.1| Glutamate-binding protein GluB [Bifidobacterium dentium Bd1] Length = 256 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 31/135 (22%), Positives = 62/135 (45%), Gaps = 4/135 (2%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 G ++ GI G K NG + GFDVD + ++ + +I + +K+R LQ Sbjct: 14 GKIRIGIKFDQPGLG-FKKNGTYVGFDVDVAKYVAKKLGYSEDQIVWKEAPSKQREAMLQ 72 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQA 152 + +D + +++ E ++F + GQ ++ K + I L+G +C Sbjct: 73 NGDVDFIVAT--YSITDERKKVVSFAGPYFVAGQDLLVRKDETSIKGPEDLNGKRLCSVT 130 Query: 153 GTTTELTLADYFKAH 167 G+T+ +T+ + F + Sbjct: 131 GSTSAVTVKEKFASE 145 >gi|332094327|gb|EGI99378.1| glutamate/aspartate periplasmic-binding protein [Shigella boydii 5216-82] Length = 302 Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust. Identities = 47/234 (20%), Positives = 90/234 (38%), Gaps = 6/234 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 S L I K G + G V F+ G+ D+ A+ A+ + P +++ Sbjct: 30 GSTLDKIAKNGMIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ AF + G + K I Sbjct: 90 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQA--AFSDTIFVVGTRLLTKKGGDIKD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L G ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 148 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 207 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 L + +P I+ S+ + + D ++ ++ T M T+ E Sbjct: 208 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQMQTSGE 261 >gi|309781433|ref|ZP_07676169.1| amino acid ABC transporter, amino acid-binding/permease protein [Ralstonia sp. 5_7_47FAA] gi|308919846|gb|EFP65507.1| amino acid ABC transporter, amino acid-binding/permease protein [Ralstonia sp. 5_7_47FAA] Length = 247 Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust. Identities = 43/176 (24%), Positives = 77/176 (43%), Gaps = 18/176 (10%) Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 NG GFDVD AL+ + +++ ++ K L S++ D+ T R+ Sbjct: 44 NGKRTGFDVDLIEALARTMG---RPVEWTDIDFKGLVPGLISRRFDVAISGIYITEERKK 100 Query: 113 SLGLAFRPITYFDGQGFIMHKKKG---ISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 + + Y+ G G + K+G I + + L+G + VQ GT + +Y K + Sbjct: 101 VVDFT---VPYYHG-GLVAMVKQGNTAIKTPADLNGKKVSVQVGTKS----VNYLKENYP 152 Query: 170 KYHPIVFERVEEIDAAYRAHRCD-AYTGDISALYALKLTNDRPSEHVILPDIISKS 224 K + E+ E++ R D A TG +A Y +K RP ++ P + ++ Sbjct: 153 KVERVEVEKNEQMFNLVEIGRADAAVTGRPAAAYYVKA---RPGLRLVEPALTAEE 205 >gi|58336906|ref|YP_193491.1| glutamine-binding protein precursor [Lactobacillus acidophilus NCFM] gi|227903464|ref|ZP_04021269.1| ABC superfamily ATP binding cassette transporter, glutamine-binding protein [Lactobacillus acidophilus ATCC 4796] gi|58254223|gb|AAV42460.1| glutamine-binding protein precursor [Lactobacillus acidophilus NCFM] gi|227868784|gb|EEJ76205.1| ABC superfamily ATP binding cassette transporter, glutamine-binding protein [Lactobacillus acidophilus ATCC 4796] Length = 272 Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust. Identities = 43/196 (21%), Positives = 80/196 (40%), Gaps = 10/196 (5%) Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 +T L G VK G +GF++D RAL+ + +K ++ A R L++ ID + Sbjct: 48 DTRLFGLTNVKT-GKIEGFEIDLARALTKQMLGKNAKADFVTTTANTRIPLLKNGNIDAV 106 Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 T+ E + + F + G ++ I SV L+ ++ GTT Sbjct: 107 L--ATMTITPERAKQVTFSKPYFPAGSSLLVPNDSKIKSVKDLNNKTVLAVKGTTA---- 160 Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220 D K + F+ + +A +A++ A T D L + N + ++ + Sbjct: 161 VDDVHKSAPKARVLQFDDYGQAMSALKANQGVALTTDNGLLAGIAQEN---PGYKLVGGV 217 Query: 221 ISKSPLAPAIIQGDTE 236 S +P A+ +G + Sbjct: 218 YSDAPYGIAVNKGQKD 233 >gi|295676371|ref|YP_003604895.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] gi|295436214|gb|ADG15384.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] Length = 264 Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust. Identities = 44/186 (23%), Positives = 79/186 (42%), Gaps = 13/186 (6%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 +L +K+RG L+ G+ F +G+ G+DVD +A+++ + P ++ Sbjct: 29 LLDQVKQRGTLRVGLEGTFPPFNSKAPSGELVGYDVDIAKAVAAKLGVKPV---FVTTEW 85 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQL 143 LQ+ + D++ T R+ +L F P + I K + +S+ L Sbjct: 86 SGIIAGLQAGKFDVIVNQVGITDARKQTLD--FSPAYTYSAAQLIQRKDDTRQFTSLEDL 143 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL-Y 202 G + V GT + +A ++K +P E + ++ A R DA D L Y Sbjct: 144 KGKKLGVGLGTNY-MDMAKSVPGIDVKTYPGAPEYLRDLAAG----RLDAALNDRLMLAY 198 Query: 203 ALKLTN 208 LK +N Sbjct: 199 LLKNSN 204 >gi|256847976|ref|ZP_05553420.1| glutamine ABC transporter substrate binding component [Lactobacillus coleohominis 101-4-CHN] gi|256715036|gb|EEU30013.1| glutamine ABC transporter substrate binding component [Lactobacillus coleohominis 101-4-CHN] Length = 281 Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust. Identities = 45/209 (21%), Positives = 87/209 (41%), Gaps = 9/209 (4%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 I++R + G++ V + NG G+DVD RA+ + + Q + + KE Sbjct: 39 IERRHKVIIGVDDSFVPMGFRQKNGKLVGYDVDLARAVFKQ-YGIKADFQTIDWSMKE-- 95 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 L++ ID+L T R+ +AF + + Q + K I++ +++G ++ Sbjct: 96 TELKNGTIDLLWNGYSVTPQRQKK--VAFSRVYLLNKQILVTKKSDHINNFQEMTGKTLG 153 Query: 150 VQAGTTTELTLADY---FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD-ISALYALK 205 VQ G+T L +Y K + P++++ A+R D + A Y ++ Sbjct: 154 VQNGSTGMTMLDEYPRLLKDRIKDHKPVLYDTFPNAFIDLNANRIQGILMDEVYADYYIQ 213 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGD 234 DR + + A + +GD Sbjct: 214 HQPDRNAYATYSSSKMPADKFAVGMRKGD 242 >gi|291288059|ref|YP_003504875.1| extracellular solute-binding protein family 3 [Denitrovibrio acetiphilus DSM 12809] gi|290885219|gb|ADD68919.1| extracellular solute-binding protein family 3 [Denitrovibrio acetiphilus DSM 12809] Length = 270 Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust. Identities = 58/251 (23%), Positives = 107/251 (42%), Gaps = 24/251 (9%) Query: 3 KDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 K V++L + T+F+ + S+ L + KRG L+ G+ G + F G+ Sbjct: 2 KKIVVTLLVFAMACVTAFANDNSLWEKSTLNQVLKRGELRVGMEAGYMPFELKNKKGEII 61 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD + L+ + K+ + +L + + DI+ T R + + A Sbjct: 62 GFDVDMAKELAKEM---GVKLTLVNTAWDGIISSLLTDKYDIIMSGMTITPQRNLQVNFA 118 Query: 118 FRPITYFDGQGFIMHKKKG--ISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHP 173 I GQ ++ K+ I S L+ ++ + G T + Y N K + Sbjct: 119 DPYIVV--GQTILIRKELAGKIKSYKDLNDPKYTVATKLGVTGDYATKKYI--GNAKIN- 173 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDI--SALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 +FE +E + DA+ D+ ++LY + N + + +P + PLA AI Sbjct: 174 -LFETEQEGAMEVVNGKADAFVYDLPYNSLYFAQ--NSKNLAFLNVP--FTYEPLAWAIR 228 Query: 232 QGDTEWYNIVS 242 +GD ++ N ++ Sbjct: 229 KGDPDFMNFLN 239 >gi|308513289|ref|NP_951857.2| amino acid ABC transporter periplasmic amino acid-binding protein [Geobacter sulfurreducens PCA] gi|41152668|gb|AAR34130.2| amino acid ABC transporter, periplasmic amino acid-binding protein [Geobacter sulfurreducens PCA] gi|298504920|gb|ADI83643.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Geobacter sulfurreducens KN400] Length = 263 Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust. Identities = 56/248 (22%), Positives = 92/248 (37%), Gaps = 23/248 (9%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 +K G L G++ A+G GFD+D + + KI++ P Sbjct: 30 VKSAGKLVIGLDDAFPPMGYRDASGKLIGFDIDAAEEVGKRL---GIKIEWQPTAWDGVI 86 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ-GFIMHKKKGISSVSQLSGASI 148 +L SK+ D + T+ E + +AF DGQ + +K ++ L I Sbjct: 87 HSLNSKKFDAIWNGM--TITDERAKQVAFTKPYIMDGQIAVVKFSEKRFKKIADLKNVKI 144 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 Q G++ + +K P ++E + +A D G I + +T Sbjct: 145 GAQKGSSA---------LNAVKKLPTAPAELKEYEDNPKAL-LDLEAGRIDVVVIDNVTG 194 Query: 209 -----DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 RP + ++P ISK P A + D E V T MV L + Sbjct: 195 RDFIAKRPGQFKVVPGFISKEPFGVAFRKEDKELREKVQKTLDKMVKDGSLAKISR--KW 252 Query: 264 VSKDTTNP 271 ++D TNP Sbjct: 253 FAEDITNP 260 >gi|318081102|ref|ZP_07988434.1| sugar-binding protein [Streptomyces sp. SA3_actF] Length = 346 Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust. Identities = 34/140 (24%), Positives = 60/140 (42%), Gaps = 11/140 (7%) Query: 33 RGFLKCGI--NTGLVGF--AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 RG L G+ N+ GF + N D +GFD+D A++ + DP + + R Sbjct: 91 RGKLVVGVDQNSYRWGFRNPQRDGNNDIEGFDIDLAHAIAKDLLGDPDALVLRAIPTNRR 150 Query: 89 FLALQSKQIDILSRNTDWTL--LREISLGLAFRPITYFDGQGFIMHKKKGISSV-SQLSG 145 A+ +D++ R T L+++S + T Q I+ + + + L+G Sbjct: 151 VQAVADHDVDMVVRTMTITCRRLKDVSFSTPYFRTT----QRIIVPRGSSVDGFNASLTG 206 Query: 146 ASICVQAGTTTELTLADYFK 165 +C +T E L + FK Sbjct: 207 KRLCSADSSTAENVLTEGFK 226 >gi|257459776|ref|ZP_05624885.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] gi|257443201|gb|EEV18335.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] Length = 268 Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust. Identities = 29/133 (21%), Positives = 59/133 (44%), Gaps = 8/133 (6%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF-DDPSKIQYLPLNA 85 L I++ G ++ G+ E G ++GF++D A++ IF KI+++PL+ Sbjct: 19 LDQIRQNGVIRIGVRDAHPPLCESNG-GKFEGFEIDLANAIAKEIFGKKEGKIEFIPLSV 77 Query: 86 KERFLALQSKQIDILSRNTDWT--LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 +R L++ ++D++ T R+I L + + G + K + ++QL Sbjct: 78 NDRIPFLEANKLDLVIGLFSITNERKRKIDFSLPYLSVNL----GVLTRKADAFTDIAQL 133 Query: 144 SGASICVQAGTTT 156 I + T Sbjct: 134 HDKKIVFEGDATV 146 >gi|296129397|ref|YP_003636647.1| extracellular solute-binding protein family 3 [Cellulomonas flavigena DSM 20109] gi|296021212|gb|ADG74448.1| extracellular solute-binding protein family 3 [Cellulomonas flavigena DSM 20109] Length = 294 Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust. Identities = 52/240 (21%), Positives = 95/240 (39%), Gaps = 21/240 (8%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 S + + + G + G F V NG +GFDV+ + ++ + P I++ Sbjct: 49 GSTMARLAEAGSITIGTKFDQPLFGLVGPNGVPEGFDVEIGKLIAGKLGIAPEDIEWKES 108 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQ 142 + R +++ ++DI+ +T+ + ++F Y GQ + K I Sbjct: 109 ISANREPFIENGEVDIVIAT--YTINDKRKEVVSFAGPYYLAGQSILTLKSNTDIQGPED 166 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+G ++C +G+T E L + + ++ E +E + R + DA + D L Sbjct: 167 LAGKNVCTVSGSTPEANLLENYPDATVQALGAYSECIEPL----RNGQVDAISTDNVILA 222 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE---WYNIV--------SWTHYAMVTA 251 ND + + D ++ P + DTE W N V SWT TA Sbjct: 223 GFAADND---DLEVRGDPFTEEPYGIGLALDDTEFRNWINDVLEESFEDGSWTEAWESTA 279 >gi|227818415|ref|YP_002822386.1| amino acid ABC transporter substrate-binding protein [Sinorhizobium fredii NGR234] gi|227337414|gb|ACP21633.1| putative amino acid ABC transporter, substrate-binding protein [Sinorhizobium fredii NGR234] Length = 278 Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust. Identities = 33/139 (23%), Positives = 58/139 (41%), Gaps = 6/139 (4%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 A L DI ++CG + FA + + GFDVD C A++ + K + Sbjct: 22 KADKLADITAAKVIRCGTFADVPPFAAPDPSTREMAGFDVDLCNAIARELG---VKAEIK 78 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 PL+ + R ++ +DI N +TL R + + F Y + I+ + Sbjct: 79 PLSVEARVPEVKLGHVDIAVANLAYTLSR--AEQIQFSHPYYLAKEMLIVKADDPGQKKA 136 Query: 142 QLSGASICVQAGTTTELTL 160 +G + G+T+EL + Sbjct: 137 DFAGVRLASTKGSTSELAI 155 >gi|254250731|ref|ZP_04944050.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Burkholderia cenocepacia PC184] gi|124879865|gb|EAY67221.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Burkholderia cenocepacia PC184] Length = 320 Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust. Identities = 33/138 (23%), Positives = 62/138 (44%), Gaps = 9/138 (6%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L I K G L+ + F V + +G+D+D L+ ++ K++ +P+N+ Sbjct: 88 LDTIAKNGTLRVAVPEDYPPFGSVGTDMQPQGYDIDMAGLLAKSLG---VKLKLVPVNSA 144 Query: 87 ERFLALQSKQIDILSRNTDWTLLRE--ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 R L + ++D++ + T RE I A+ P YF QG +S+ + L+ Sbjct: 145 NRIPYLTTNKVDMVISSLGKTPEREKVIDFSSAYAP--YF--QGVFGPSDVKVSTPADLT 200 Query: 145 GASICVQAGTTTELTLAD 162 G ++ G E+ L+ Sbjct: 201 GKTVGATRGALEEIALSQ 218 >gi|238026228|ref|YP_002910459.1| glutamate/aspartate ABC transporter periplasmic glutamate/aspartate-binding protein [Burkholderia glumae BGR1] gi|237875422|gb|ACR27755.1| Glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia glumae BGR1] Length = 297 Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust. Identities = 45/203 (22%), Positives = 79/203 (38%), Gaps = 6/203 (2%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDP 75 + + A L IK G + G + F+ N G+ DF + A+ + P Sbjct: 20 AIAQEAGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVIGYARDFQMRIVDAVKKKLNLP 79 Query: 76 S-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 + + + +P+ ++ R +Q+ +DI +T L R+ AF + G + K Sbjct: 80 NLQTKNIPVTSQNRIPLVQNGTVDIECGSTTNNLDRQKQA--AFSTTYFVIGTRLMTSKD 137 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 GI + L G ++ AGTT+E L M + I + E R A+ Sbjct: 138 SGIKDFADLKGKTVVTTAGTTSERLLRAMNNDKQMGMNIISAKDHGESFQTLETGRAVAF 197 Query: 195 TGDISALYALKLTNDRPSEHVIL 217 D + L + +P VI+ Sbjct: 198 MMDDALLAGERAKAKKPDNWVIV 220 >gi|302519117|ref|ZP_07271459.1| sugar-binding protein [Streptomyces sp. SPB78] gi|302428012|gb|EFK99827.1| sugar-binding protein [Streptomyces sp. SPB78] Length = 336 Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust. Identities = 33/140 (23%), Positives = 60/140 (42%), Gaps = 11/140 (7%) Query: 33 RGFLKCGI--NTGLVGF--AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 RG L G+ N+ GF + N D +GFD+D A++ + DP + + R Sbjct: 81 RGKLVVGVDQNSYRWGFRNPQRDGNNDIEGFDIDLAHAIAKDLLGDPDALVLRAIPTNRR 140 Query: 89 FLALQSKQIDILSRNTDWTL--LREISLGLAFRPITYFDGQGFIMHKKKGISSV-SQLSG 145 A+ +D++ R T L+++S + + Q I+ + + + L+G Sbjct: 141 VQAVADHDVDMVVRTMTITCRRLKDVSFSTPY----FRTTQRIIVPRGSSVDGFNASLTG 196 Query: 146 ASICVQAGTTTELTLADYFK 165 +C +T E L + FK Sbjct: 197 KRLCSADSSTAENVLTEGFK 216 >gi|26246886|ref|NP_752926.1| arginine-binding periplasmic protein 1 [Escherichia coli CFT073] gi|91209897|ref|YP_539883.1| arginine-binding periplasmic protein 1 [Escherichia coli UTI89] gi|110641064|ref|YP_668794.1| arginine-binding periplasmic protein 1 precursor [Escherichia coli 536] gi|110804860|ref|YP_688380.1| arginine 3rd transport system periplasmic binding protein [Shigella flexneri 5 str. 8401] gi|117623043|ref|YP_851956.1| arginine transporter subunit [Escherichia coli APEC O1] gi|191172067|ref|ZP_03033611.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli F11] gi|193069380|ref|ZP_03050335.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli E110019] gi|194433081|ref|ZP_03065363.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Shigella dysenteriae 1012] gi|215485994|ref|YP_002328425.1| arginine transporter subunit [Escherichia coli O127:H6 str. E2348/69] gi|218557767|ref|YP_002390680.1| arginine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli S88] gi|218688645|ref|YP_002396857.1| arginine ABC transporter subunit periplasmic-binding protein [Escherichia coli ED1a] gi|218699239|ref|YP_002406868.1| arginine ABC transporter subunit periplasmic-binding protein [Escherichia coli IAI39] gi|218704290|ref|YP_002411809.1| arginine ABC transporter periplasmic-binding protein [Escherichia coli UMN026] gi|227884173|ref|ZP_04001978.1| arginine-binding periplasmic protein 1 precursor [Escherichia coli 83972] gi|237707173|ref|ZP_04537654.1| arginine-binding periplasmic protein 1 [Escherichia sp. 3_2_53FAA] gi|293404168|ref|ZP_06648162.1| arginine ABC transporter [Escherichia coli FVEC1412] gi|293409238|ref|ZP_06652814.1| arginine ABC transporter [Escherichia coli B354] gi|298379951|ref|ZP_06989556.1| arginine ABC transporter [Escherichia coli FVEC1302] gi|300901230|ref|ZP_07119331.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 198-1] gi|300935046|ref|ZP_07150078.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 21-1] gi|300991843|ref|ZP_07179668.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 200-1] gi|300993467|ref|ZP_07180409.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 45-1] gi|301020603|ref|ZP_07184680.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 69-1] gi|301051209|ref|ZP_07198038.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 185-1] gi|312969070|ref|ZP_07783277.1| arginine-binding periplasmic protein 1 [Escherichia coli 2362-75] gi|331646131|ref|ZP_08347234.1| arginine-binding periplasmic protein 1 [Escherichia coli M605] gi|331651881|ref|ZP_08352900.1| arginine-binding periplasmic protein 1 [Escherichia coli M718] gi|331656936|ref|ZP_08357898.1| arginine-binding periplasmic protein 1 [Escherichia coli TA206] gi|331662275|ref|ZP_08363198.1| arginine-binding periplasmic protein 1 [Escherichia coli TA143] gi|331682372|ref|ZP_08382991.1| arginine-binding periplasmic protein 1 [Escherichia coli H299] gi|26107286|gb|AAN79469.1|AE016758_73 Arginine-binding periplasmic protein 1 precursor [Escherichia coli CFT073] gi|91071471|gb|ABE06352.1| arginine-binding periplasmic protein 1 precursor [Escherichia coli UTI89] gi|110342656|gb|ABG68893.1| arginine-binding periplasmic protein 1 precursor [Escherichia coli 536] gi|110614408|gb|ABF03075.1| arginine 3rd transport system periplasmic binding protein [Shigella flexneri 5 str. 8401] gi|115512167|gb|ABJ00242.1| arginine transporter subunit [Escherichia coli APEC O1] gi|190907594|gb|EDV67189.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli F11] gi|192957333|gb|EDV87781.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli E110019] gi|194418578|gb|EDX34665.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Shigella dysenteriae 1012] gi|215264066|emb|CAS08408.1| arginine transporter subunit [Escherichia coli O127:H6 str. E2348/69] gi|218364536|emb|CAR02218.1| arginine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli S88] gi|218369225|emb|CAR16980.1| arginine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli IAI39] gi|218426209|emb|CAR07033.1| arginine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli ED1a] gi|218431387|emb|CAR12265.1| arginine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli UMN026] gi|226898383|gb|EEH84642.1| arginine-binding periplasmic protein 1 [Escherichia sp. 3_2_53FAA] gi|227838925|gb|EEJ49391.1| arginine-binding periplasmic protein 1 precursor [Escherichia coli 83972] gi|284920716|emb|CBG33779.1| arginine ABC transporter, substrate-binding protein [Escherichia coli 042] gi|291428754|gb|EFF01779.1| arginine ABC transporter [Escherichia coli FVEC1412] gi|291469706|gb|EFF12190.1| arginine ABC transporter [Escherichia coli B354] gi|294494173|gb|ADE92929.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli IHE3034] gi|298279649|gb|EFI21157.1| arginine ABC transporter [Escherichia coli FVEC1302] gi|300297116|gb|EFJ53501.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 185-1] gi|300305453|gb|EFJ59973.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 200-1] gi|300355304|gb|EFJ71174.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 198-1] gi|300398621|gb|EFJ82159.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 69-1] gi|300406581|gb|EFJ90119.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 45-1] gi|300459709|gb|EFK23202.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 21-1] gi|307552706|gb|ADN45481.1| arginine-binding periplasmic protein 1 precursor [Escherichia coli ABU 83972] gi|312286472|gb|EFR14385.1| arginine-binding periplasmic protein 1 [Escherichia coli 2362-75] gi|315287305|gb|EFU46716.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 110-3] gi|315292538|gb|EFU51890.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 153-1] gi|315299388|gb|EFU58640.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 16-3] gi|320177803|gb|EFW52789.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtI [Shigella boydii ATCC 9905] gi|320196642|gb|EFW71265.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli WV_060327] gi|323190685|gb|EFZ75954.1| arginine-binding periplasmic protein 1 [Escherichia coli RN587/1] gi|323953433|gb|EGB49299.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli H252] gi|323958152|gb|EGB53861.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli H263] gi|324009771|gb|EGB78990.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 57-2] gi|324013025|gb|EGB82244.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 60-1] gi|330910643|gb|EGH39153.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli AA86] gi|331044883|gb|EGI17010.1| arginine-binding periplasmic protein 1 [Escherichia coli M605] gi|331050159|gb|EGI22217.1| arginine-binding periplasmic protein 1 [Escherichia coli M718] gi|331055184|gb|EGI27193.1| arginine-binding periplasmic protein 1 [Escherichia coli TA206] gi|331060697|gb|EGI32661.1| arginine-binding periplasmic protein 1 [Escherichia coli TA143] gi|331080003|gb|EGI51182.1| arginine-binding periplasmic protein 1 [Escherichia coli H299] gi|332088878|gb|EGI93990.1| arginine-binding periplasmic protein 1 [Shigella boydii 5216-82] gi|332091087|gb|EGI96177.1| arginine-binding periplasmic protein 1 [Shigella dysenteriae 155-74] Length = 243 Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust. Identities = 48/203 (23%), Positives = 83/203 (40%), Gaps = 34/203 (16%) Query: 47 FAEVKANGDWKGFDVDFCRALSSAI-----FDDPSKIQYLPLNAKERFLALQSKQIDILS 101 F + AN GFDVD +AL I F + + +P +L+ ++++ + Sbjct: 34 FESIDANNQIVGFDVDLAQALCKEIDATCTFSNQAFDSLIP--------SLKFRRVEAVM 85 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 D T RE + L P Y+D + ++ +SV QL G + VQ GTT + + Sbjct: 86 AGMDITPEREKQV-LFTTP--YYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFI- 141 Query: 162 DYFKAHNMKYHP----IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 M HP + ++ + + R D+ GD + + + D P + Sbjct: 142 -------MDKHPEITTVPYDSYQNAKLDLQNGRIDSVFGDTAVV--TEWLKDNPKLAAVG 192 Query: 218 PDIISK----SPLAPAIIQGDTE 236 + K + L A+ QG+TE Sbjct: 193 DKVTDKDYFGTGLGIAVRQGNTE 215 >gi|295704149|ref|YP_003597224.1| sulfur-containing amino acid ABC transporter sulfur-containing amino acid-binding protein TcyK [Bacillus megaterium DSM 319] gi|294801808|gb|ADF38874.1| sulfur-containing amino acid ABC transporter, sulfur-containing amino acid-binding protein TcyK [Bacillus megaterium DSM 319] Length = 273 Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust. Identities = 38/177 (21%), Positives = 77/177 (43%), Gaps = 11/177 (6%) Query: 54 GDWKGFDVDFCRALSSAIFDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G+ G+DV+ + + + P+ K ++ ++ L+L+S +ID+++ + R+ Sbjct: 57 GNLTGYDVELVKEIDKRL---PNYKFEFKTMDFSNLLLSLESNKIDLVAHQMEVNEERKQ 113 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 P F + K I S+ LSG + V A + + + Y K H + + Sbjct: 114 KFLFNKEPYNIFPLHVVVNEKNTSIKSIKDLSGKKVIVGATSNSANLIDKYNKEHGNRIN 173 Query: 173 PIVF--ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP-SEHVILPDIISKSPL 226 IV+ + ++ + R DA IS +A+ N + +E ++ IS S + Sbjct: 174 -IVYSGQGSDDTKTQLKTGRADAT---ISTPFAVDFVNKQADAEQKVVGPAISNSKV 226 >gi|163789533|ref|ZP_02183971.1| hypothetical protein CAT7_08825 [Carnobacterium sp. AT7] gi|159875065|gb|EDP69131.1| hypothetical protein CAT7_08825 [Carnobacterium sp. AT7] Length = 483 Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust. Identities = 41/153 (26%), Positives = 68/153 (44%), Gaps = 17/153 (11%) Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 A+G++KG DVD A++ D K + PL AL++ Q+D + T R+ Sbjct: 54 ADGEYKGIDVDLLEAIAK---DQGFKYELRPLGFSAALQALETNQVDGMIAGMSITPERQ 110 Query: 112 ISLGLAFRPITYFDGQGFIM---HKKKGISSVSQLSGASICVQAGTT----TELTLADY- 163 S + P YF+ G +M I+S L G ++ ++ GTT E +Y Sbjct: 111 DSFDFS-EP--YFE-SGVVMAVSADNDDITSYEDLEGKTVAIKVGTTGAAFAESIQEEYG 166 Query: 164 FKAHNMKYHPIVFERVE--EIDAAYRAHRCDAY 194 F + + ++E V+ DAA+ + AY Sbjct: 167 FNVNTFEDSANMYEDVQTGNSDAAFEDYPVMAY 199 >gi|239931234|ref|ZP_04688187.1| sugar-binding protein [Streptomyces ghanaensis ATCC 14672] gi|291439606|ref|ZP_06578996.1| sugar-binding protein [Streptomyces ghanaensis ATCC 14672] gi|291342501|gb|EFE69457.1| sugar-binding protein [Streptomyces ghanaensis ATCC 14672] Length = 332 Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust. Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 3/115 (2%) Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 +G +GFD+D ++ I D +Q+ + +R A+Q ++D++ R R Sbjct: 100 SGRLEGFDIDLVHRIAEDILGDADAVQFKAIPTDQRIPAIQDGRVDMVVRTMTINCARME 159 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSV-SQLSGASICVQAGTTTELTLADYFKA 166 +AF + GQ + K + L+ IC AG+T L + KA Sbjct: 160 E--VAFSAPYFRTGQQVLAPKSSPVEGYDGTLANRRICTAAGSTAYAKLEEDKKA 212 >gi|163751502|ref|ZP_02158725.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Shewanella benthica KT99] gi|161328623|gb|EDP99773.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Shewanella benthica KT99] Length = 241 Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust. Identities = 33/137 (24%), Positives = 59/137 (43%), Gaps = 10/137 (7%) Query: 31 KKRGFLKCGINTGLVGFAEV--KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 K L G N F V + ++KGFD+D R ++S D ++ + Sbjct: 20 KSDDVLVLGTNASFPPFEYVGGASGNEFKGFDIDIARQIAS---DSGKTLKIQNMKFDSL 76 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGA 146 +AL + +ID ++ T R+ S+ + Y++ ++ KK I S++ L G Sbjct: 77 IMALNAGRIDFIAAGMTITPERQASVNFS---TPYYEATQVVITKKSDTSIHSITDLRGK 133 Query: 147 SICVQAGTTTELTLADY 163 VQ G+T ++ Y Sbjct: 134 HFAVQLGSTADIMAKKY 150 >gi|161504171|ref|YP_001571283.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160865518|gb|ABX22141.1| hypothetical protein SARI_02277 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 308 Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust. Identities = 49/234 (20%), Positives = 88/234 (37%), Gaps = 6/234 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 S L I K G + G V F+ G+ D+ A+ A+ + P +++ Sbjct: 36 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 95 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 LP+ ++ R LQ+ D +T L R+ AF + G + K I Sbjct: 96 LLPITSQNRIPLLQNGTFDFECGSTTNNLERQKQA--AFSDTIFVVGTRLLTKKGGDIKD 153 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L G ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 154 FPDLKGKAVVVTSGTTSEILLHKLNEEQKMGMRIISAKDHGDSFRTLESGRAVAFMMDDA 213 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 L + +P I+ S+ + + D E+ ++ T T+ E Sbjct: 214 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKNDPEFKKLMDDTIAQAQTSGE 267 >gi|327183100|gb|AEA31547.1| glutamine ABC transporter [Lactobacillus amylovorus GRL 1118] Length = 219 Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust. Identities = 40/179 (22%), Positives = 73/179 (40%), Gaps = 9/179 (5%) Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +GF++D AL+ + +K ++ A + L++K ID + T+ E + Sbjct: 9 RGFEIDLAEALTHKMLGKNAKANFVTTTANTKIQLLKNKNIDAVI--AAMTITPERKKQV 66 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F + GQ ++ K I +V L+ + + GTT AD K + F Sbjct: 67 NFSNPYFPAGQSIMVAKNSKIKNVKDLNNKRVLIVKGTTA----ADAVHKFAPKAEILQF 122 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + AA +A + DA D L + +D P + + + P A+ +G T Sbjct: 123 DDYGQAFAALKADQGDALVTDNGILAG--ILHDNPG-YKLTGGTFTNQPYGIAVNKGQT 178 >gi|281177998|dbj|BAI54328.1| arginine ABC transporter substrate binding component [Escherichia coli SE15] Length = 243 Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust. Identities = 48/203 (23%), Positives = 83/203 (40%), Gaps = 34/203 (16%) Query: 47 FAEVKANGDWKGFDVDFCRALSSAI-----FDDPSKIQYLPLNAKERFLALQSKQIDILS 101 F + AN GFDVD +AL I F + + +P +L+ ++++ + Sbjct: 34 FESIDANNQIVGFDVDLAQALCKEIDATCTFSNQAFDSLIP--------SLKFRRVEAVM 85 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 D T RE + L P Y+D + ++ +SV QL G + VQ GTT + + Sbjct: 86 AGMDITPEREKQV-LFTTP--YYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFI- 141 Query: 162 DYFKAHNMKYHP----IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 M HP + ++ + + R D+ GD + + + D P + Sbjct: 142 -------MDKHPEITTVPYDSYQNAKLDLQNGRIDSVFGDTAVV--TEWLKDNPKLAAVG 192 Query: 218 PDIISK----SPLAPAIIQGDTE 236 + K + L A+ QG+TE Sbjct: 193 DKVTDKDYFGTGLGIAVRQGNTE 215 >gi|150399037|ref|YP_001322804.1| extracellular solute-binding protein [Methanococcus vannielii SB] gi|150011740|gb|ABR54192.1| extracellular solute-binding protein family 3 [Methanococcus vannielii SB] Length = 239 Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust. Identities = 48/210 (22%), Positives = 90/210 (42%), Gaps = 12/210 (5%) Query: 12 LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI 71 L IL F S + S G L G+ +V + + NG GF++D+ L + + Sbjct: 2 LTILLFISGCLSNSSKQLTNNEGTLTVGVVPYVVPLSYYE-NGKLTGFEIDYANYLGNKL 60 Query: 72 FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD-GQGFI 130 K++++P K+ A+++K++DI T R+ + + RP Y G Sbjct: 61 ---NLKVEFVPYEFKDILNAVENKEVDIAISCITITPERKKRVHFS-RP--YLKTGSVVA 114 Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190 + + +S +S G I V G+ E ++ K N++ I + + +++ Sbjct: 115 VFSTEEVSDISDFDGKKIGVLKGSVHENYALEFKKVRNIEV--ITYNTQSSLINGLKSN- 171 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDI 220 + Y I +Y L ND P + I+ D+ Sbjct: 172 -EVYAVIIDKIYLDSLKNDIPIKEAIVLDV 200 >gi|271499712|ref|YP_003332737.1| family 3 extracellular solute-binding protein [Dickeya dadantii Ech586] gi|270343267|gb|ACZ76032.1| extracellular solute-binding protein family 3 [Dickeya dadantii Ech586] Length = 297 Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust. Identities = 47/231 (20%), Positives = 91/231 (39%), Gaps = 6/231 (2%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQYLP 82 L IK G + G V F+ G+ + + A+ D P+ +++ +P Sbjct: 29 LKKIKDNGVITIGHRESSVPFSYYDNQQKVVGYSQAYSDKIVEAVRKKLDAPNLQVKLIP 88 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R LQ+ D+ +T L R+ + AF + G + K + S Sbjct: 89 ITSQNRIPLLQNGTYDLECGSTTNNLERQQQV--AFSDTIFIIGTRLLTKKDSDVKDFSD 146 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+G ++ V +GTT+E+ L + + I + + + R A+ D + L Sbjct: 147 LAGKAVVVTSGTTSEVLLNKMNEEKKLNMRIISAKDHGDSFRTLESGRAVAFMMDDALLA 206 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 + P E VI S+ + + D ++ +V T + T+ E Sbjct: 207 GERAKAKAPDEWVITGTPQSREAYGCMLRKDDPQFKQLVDATISQVQTSGE 257 >gi|86741119|ref|YP_481519.1| extracellular solute-binding protein [Frankia sp. CcI3] gi|86567981|gb|ABD11790.1| amino acid ABC transporter substrate-binding protein, PAAT family [Frankia sp. CcI3] Length = 343 Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust. Identities = 25/128 (19%), Positives = 53/128 (41%), Gaps = 3/128 (2%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 ++L I++RG+L G+ + F + G ++GFDV+ + IF +++ Sbjct: 93 TGTVLETIERRGYLIAGVLADVPPFGSISPFTGQFEGFDVEIANLVGRRIFGADGHVRFR 152 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 + ER L+ +D++ R + F + Y + Q ++ + + Sbjct: 153 AVTYAERIPVLRDGAVDVVVATMTTNCERRALVD--FSAVYYNETQRVLVPRDSPYQGMD 210 Query: 142 QLSGASIC 149 L G +C Sbjct: 211 DLGGRRVC 218 >gi|224826757|ref|ZP_03699857.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum 2002] gi|224600977|gb|EEG07160.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum 2002] Length = 301 Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust. Identities = 45/195 (23%), Positives = 78/195 (40%), Gaps = 8/195 (4%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD---PS-KIQYLP 82 L IK G + G + F+ + N G+ +D + A+ D P K+QY Sbjct: 30 LKKIKDSGTIVIGHRDASIPFSYLDNNQQPIGYSMDIAHKVVEAVKKDLKMPGLKVQYNL 89 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD-GQGFIMHKKKGISSVS 141 + ++ R +Q+ +DI +T L R+ + + + F+ G + K GI Sbjct: 90 VTSQTRIPLVQNGTVDIECGSTTNNLERQKQVDFS---VGIFEIGTRLLTKKTSGIKDFP 146 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L G ++ AGTT+E + M + I + E + R A+ D L Sbjct: 147 DLKGKNVVTTAGTTSERLIKAMNAEKQMGMNIISAKDHGESFLMAESGRAVAFMMDDVLL 206 Query: 202 YALKLTNDRPSEHVI 216 Y + P+E V+ Sbjct: 207 YGEMVKARNPAEWVV 221 >gi|91789816|ref|YP_550768.1| extracellular solute-binding protein [Polaromonas sp. JS666] gi|91699041|gb|ABE45870.1| amino acid ABC transporter substrate-binding protein, PAAT family [Polaromonas sp. JS666] Length = 268 Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust. Identities = 40/154 (25%), Positives = 63/154 (40%), Gaps = 5/154 (3%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V + L + TS +A + DI KRG +K G+ G V ++G+ G+D D A Sbjct: 12 VGLTVLASVALTSTMASAQTVTDIIKRGKVKIGVLVGAPPMGAVDSSGNPVGYDADTA-A 70 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L + P ++ + L R AL+S ++D L T R ++ P F Sbjct: 71 LIAKYLGVP--LEMVALEPPARIPALESGKVDFLVSTLAPTPERAKTVMFTI-PYNAFQ- 126 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 G K + L G + V G++ E L Sbjct: 127 VGIYAKKALKVKDWGDLKGKKVGVNRGSSVEAAL 160 >gi|241661990|ref|YP_002980350.1| family 3 extracellular solute-binding protein [Ralstonia pickettii 12D] gi|240864017|gb|ACS61678.1| extracellular solute-binding protein family 3 [Ralstonia pickettii 12D] Length = 302 Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust. Identities = 35/173 (20%), Positives = 70/173 (40%), Gaps = 2/173 (1%) Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 K+ +P+ ++ R LQ+ ID+ +T L R+ +F + G ++ K G Sbjct: 87 KVNEIPVTSQNRITLLQNGTIDLECGSTTNNLERQKQA--SFTNTIFIIGTRIMVKKDSG 144 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 + + L G ++ AGTT+E L M + I + + + R A+ Sbjct: 145 VKDWADLKGKNVVTTAGTTSERLLRKMNDEKQMGMNIISTKDHGQSFLTLESGRAVAFMM 204 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 D + LY + P++ V++ S+ + + D + + T M+ Sbjct: 205 DDALLYGERAKAKNPADWVVVAKPQSREAYGCMVRKDDKPFKALADKTIAGMM 257 >gi|91781330|ref|YP_556537.1| polar amino acid ABC transporter periplasmic ligand-binding protein [Burkholderia xenovorans LB400] gi|91693990|gb|ABE37187.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia xenovorans LB400] Length = 282 Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust. Identities = 64/260 (24%), Positives = 98/260 (37%), Gaps = 11/260 (4%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 + + +A L DIK RG + GI+ + AN + GFD A++ + KI Sbjct: 23 TVAASADTLDDIKSRGTMTVGIDPTFAPYEYTDANNNIVGFDPAILAAVAKHLG---VKI 79 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--G 136 +Y L L + DI + T R L +G KK Sbjct: 80 EYQRLAFSGIIPGLLAHSFDIEGSALNVTAERAKRLAYVVPTSKTVNGALVRADFKKIPA 139 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMK-YHPIVFERVEEID---AAYRAHRCD 192 +++ L+G + V++ + E L + + K PI V+ +D AA R D Sbjct: 140 KATIESLAGLTAAVKSASAPEQILKQFNETLKAKGLAPITLISVDSVDQTVAALLTRRAD 199 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 DI+ L + N PS+ ++ +A A DT +S AM + Sbjct: 200 FVFDDITVLAGVIKQN--PSKLKSTGELGPSQWIALATRPDDTRLNKAISDEIIAMKKSG 257 Query: 253 ELGITQKNINQVSKDTTNPD 272 EL QK VS DT D Sbjct: 258 ELARLQKASLGVSFDTPTSD 277 >gi|317491413|ref|ZP_07949849.1| lysine-arginine-ornithine-binding periplasmic protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920960|gb|EFV42283.1| lysine-arginine-ornithine-binding periplasmic protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 243 Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust. Identities = 33/160 (20%), Positives = 68/160 (42%), Gaps = 20/160 (12%) Query: 47 FAEVKANGDWKGFDVDFCRAL-----SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101 F + AN +GFD+D A+ ++ F + S +P +L+ K+ID + Sbjct: 34 FEFMDANNQMQGFDIDLANAICKQMKATCTFTNQSFDSLIP--------SLKFKRIDAVI 85 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 D T R+ + Y+D + +K ++ ++ L G + +Q G+T + Sbjct: 86 SGMDITPERQKQVAFT---APYYDNSALFIAEKGKVADIAALKGKRVGMQNGSTHQ---- 138 Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 Y + + + P+ ++ + + R DA GD + + Sbjct: 139 KYLQEKHPEITPVPYDSYQNAILDLKNGRLDAVFGDTAVV 178 >gi|300693657|ref|YP_003749630.1| amino-acid-binding periplasmic ABC transporter protein [Ralstonia solanacearum PSI07] gi|299075694|emb|CBJ34991.1| putative amino-acid-binding periplasmic abc transporter protein [Ralstonia solanacearum PSI07] Length = 280 Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust. Identities = 55/251 (21%), Positives = 103/251 (41%), Gaps = 19/251 (7%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRAL 67 + L L S A +I+K L+CG + FA + GFDVD C+AL Sbjct: 10 LTVLACLCAASLPALADQWAEIQKNKELRCGTFADVPPFAAPDPKTREMVGFDVDMCQAL 69 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + + PL+ + R ++ ++D+ N +TL R + + F Y + Sbjct: 70 AKRLG---VAAKITPLSVEARVPEVKMGRVDVTVANLAYTLGR--AEQIQFSDPYYLAKE 124 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 + +S + G + G+T+EL++ K + P+ F ++ +AY Sbjct: 125 MLAVKASDPGTSKADYKGKRLAAAKGSTSELSI----KMNG--SEPVTF---QDTGSAYM 175 Query: 188 AHRCDAYTGDIS-ALYALKLTNDRPS---EHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 A + G +S + KL N S E ++ + + P+ + +G+ + V+ Sbjct: 176 AVQQGKALGIVSNTMTITKLVNQSKSGGIELKMIAEPMIYQPIGVGMKKGEPQLLAKVNE 235 Query: 244 THYAMVTAEEL 254 AM A E+ Sbjct: 236 ALLAMDKAGEI 246 >gi|24112233|ref|NP_706743.1| arginine 3rd transport system periplasmic binding protein [Shigella flexneri 2a str. 301] gi|30062345|ref|NP_836516.1| arginine 3rd transport system periplasmic binding protein [Shigella flexneri 2a str. 2457T] gi|24051080|gb|AAN42450.1| arginine 3rd transport system periplasmic binding protein [Shigella flexneri 2a str. 301] gi|30040590|gb|AAP16322.1| arginine 3rd transport system periplasmic binding protein [Shigella flexneri 2a str. 2457T] gi|281600186|gb|ADA73170.1| Arginine 3rd transport system periplasmic binding protein [Shigella flexneri 2002017] gi|313650230|gb|EFS14642.1| arginine-binding periplasmic protein 1 [Shigella flexneri 2a str. 2457T] Length = 243 Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust. Identities = 48/203 (23%), Positives = 83/203 (40%), Gaps = 34/203 (16%) Query: 47 FAEVKANGDWKGFDVDFCRALSSAI-----FDDPSKIQYLPLNAKERFLALQSKQIDILS 101 F + AN GFDVD +AL I F + + +P +L+ ++++ + Sbjct: 34 FESIDANNQIVGFDVDLAQALCKEIDATCTFSNQAFDSLIP--------SLKFRRVEAVM 85 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 D T RE + L P Y+D + ++ +SV QL G + VQ GTT + + Sbjct: 86 AGMDITPEREKQV-LFTTP--YYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFI- 141 Query: 162 DYFKAHNMKYHP----IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 M HP + ++ + + R D+ GD + + + D P + Sbjct: 142 -------MDKHPEITTVPYDSYQNAKLDLQNGRIDSVFGDTAVV--TEWLKDNPKLAAVG 192 Query: 218 PDIISK----SPLAPAIIQGDTE 236 + K + L A+ QG+TE Sbjct: 193 DKVTDKDYFGTGLGIAVRQGNTE 215 >gi|154684861|ref|YP_001420022.1| YxeM [Bacillus amyloliquefaciens FZB42] gi|154350712|gb|ABS72791.1| YxeM [Bacillus amyloliquefaciens FZB42] Length = 263 Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust. Identities = 46/157 (29%), Positives = 64/157 (40%), Gaps = 14/157 (8%) Query: 51 KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 K NG GFDVD A++ I K+ + L LQ+ ++D +S T R Sbjct: 48 KENGKLTGFDVDVMEAVAKKI---NMKLDWKLLEFSGLMGELQTGKLDTISNQVAVTDER 104 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT--TELTLADYFKAHN 168 + + P +Y Q + + K I SV+ L G ++ G+ L D K N Sbjct: 105 KKTYNFT-EPYSYAGTQIVVKNDNKDIKSVNDLKGKTVAAVLGSNHAKNLESKDPDKKIN 163 Query: 169 MKYHPIVFERVEEI--DAAYRAHRCDAYTGDISALYA 203 MK +E E D AY R DAY S L A Sbjct: 164 MK----TYETQEGTLKDVAY--GRVDAYVNSRSVLIA 194 >gi|134280643|ref|ZP_01767353.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei 305] gi|134247665|gb|EBA47749.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei 305] Length = 299 Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust. Identities = 31/139 (22%), Positives = 60/139 (43%), Gaps = 2/139 (1%) Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++ +P+ ++ R +Q+ +D+ +T T +E + ++F + G I+ K G+ Sbjct: 85 VREIPITSQNRIPLVQNGTVDLECGSTTHT--KERANQVSFSNSIFQYGMRLIVKKSSGV 142 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 L+G ++ AGTT E L + M I + + ++ R A+ D Sbjct: 143 KDFPDLAGKTVATTAGTTEERLLRQWNAEKGMAMQIISAKDHADAFLNVKSGRAVAFFMD 202 Query: 198 ISALYALKLTNDRPSEHVI 216 LY K P ++VI Sbjct: 203 EPLLYGAKAKEANPGDYVI 221 >gi|300717207|ref|YP_003742010.1| L-cystine ABC transporter, extracellular solute-binding protein [Erwinia billingiae Eb661] gi|299063043|emb|CAX60163.1| L-cystine ABC transporter, extracellular solute-binding protein [Erwinia billingiae Eb661] Length = 267 Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust. Identities = 53/239 (22%), Positives = 101/239 (42%), Gaps = 15/239 (6%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 VS+ + +F+ + ++L +K+RG L G+ F+ NG GF+VDF A Sbjct: 15 VSLALVAGFSVNAFAADENLLSKVKERGSLLVGLEGTYPPFSFQDENGKLAGFEVDFADA 74 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + K P +L SK+ID++ + R+ + P T Sbjct: 75 LAQHL---GVKASLKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDFS-TPYTISGI 130 Query: 127 QGFIMHKKKGISSVSQ---LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 Q + KK+ +S+S+ LSG + V G+ E L K +++ + + +++ Sbjct: 131 QA--LTKKENAASISKPEDLSGKKVGVGLGSNYEQWLRANVKGVDIRTYDDDPTKYQDL- 187 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 R R +A + L AL L + + S+ A+ +G+T+ + ++ Sbjct: 188 ---RVGRINAIL--VDRLAALDLVKKTGNTLAVAGPAFSRQESGVALRKGNTQLLDAIN 241 >gi|296158165|ref|ZP_06840997.1| extracellular solute-binding protein family 3 [Burkholderia sp. Ch1-1] gi|295891501|gb|EFG71287.1| extracellular solute-binding protein family 3 [Burkholderia sp. Ch1-1] Length = 337 Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust. Identities = 38/166 (22%), Positives = 65/166 (39%), Gaps = 2/166 (1%) Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 K+ + + + R L + QID+ +T T+ RE + Y I K G Sbjct: 122 KVHEITVTSSNRTPMLLNNQIDLECGSTTHTVERESVAAFSNSFFQY--AVRMIARKSSG 179 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 I+ L+G ++ AGT+ E L ++ E A + R A+ Sbjct: 180 ITDFQDLAGKTVVTTAGTSDERLLRRLNTDKHLNMRITSARDHLEAFGAVKDDRAVAFVM 239 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 D +Y K T+ RP + V+ + A +GD + N+V+ Sbjct: 240 DEPIVYGFKSTDSRPDDFVVTGTPLGYEVYACMFRKGDEPFRNLVN 285 >gi|16128831|ref|NP_415384.1| arginine transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|74311407|ref|YP_309826.1| arginine 3rd transport system periplasmic binding protein [Shigella sonnei Ss046] gi|82543351|ref|YP_407298.1| arginine 3rd transport system periplasmic binding protein [Shigella boydii Sb227] gi|89107714|ref|AP_001494.1| arginine transporter subunit [Escherichia coli str. K-12 substr. W3110] gi|157156637|ref|YP_001462061.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli E24377A] gi|157160386|ref|YP_001457704.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli HS] gi|170080522|ref|YP_001729842.1| arginine ABC transporter periplasmic-binding protein [Escherichia coli str. K-12 substr. DH10B] gi|187732757|ref|YP_001880940.1| arginine ABC transporter periplasmic arginine-binding protein ArtI [Shigella boydii CDC 3083-94] gi|188494716|ref|ZP_03001986.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli 53638] gi|191166170|ref|ZP_03028004.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli B7A] gi|193064432|ref|ZP_03045513.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli E22] gi|194438380|ref|ZP_03070470.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli 101-1] gi|209918112|ref|YP_002292196.1| arginine ABC transporter substrate binding component [Escherichia coli SE11] gi|218553449|ref|YP_002386362.1| arginine ABC transporter periplasmic-binding protein [Escherichia coli IAI1] gi|218694337|ref|YP_002402004.1| arginine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli 55989] gi|238900122|ref|YP_002925918.1| arginine transporter subunit [Escherichia coli BW2952] gi|253774107|ref|YP_003036938.1| cationic amino acid ABC transporter periplasmic binding protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254160978|ref|YP_003044086.1| arginine transporter subunit [Escherichia coli B str. REL606] gi|256021016|ref|ZP_05434881.1| arginine transporter subunit [Shigella sp. D9] gi|256023510|ref|ZP_05437375.1| arginine transporter subunit [Escherichia sp. 4_1_40B] gi|260843114|ref|YP_003220892.1| arginine 3rd transport system periplasmic binding protein ArtI [Escherichia coli O103:H2 str. 12009] gi|260854155|ref|YP_003228046.1| arginine 3rd transport system periplasmic binding protein ArtI [Escherichia coli O26:H11 str. 11368] gi|260867036|ref|YP_003233438.1| arginine 3rd transport system periplasmic binding protein ArtI [Escherichia coli O111:H- str. 11128] gi|293414144|ref|ZP_06656793.1| arginine transport system substrate-binding protein [Escherichia coli B185] gi|293433161|ref|ZP_06661589.1| arginine-binding periplasmic protein 1 [Escherichia coli B088] gi|297516292|ref|ZP_06934678.1| arginine 3rd transport system periplasmic binding protein ArtI [Escherichia coli OP50] gi|300817037|ref|ZP_07097256.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 107-1] gi|300824004|ref|ZP_07104126.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 119-7] gi|300902396|ref|ZP_07120379.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 84-1] gi|300921106|ref|ZP_07137490.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 115-1] gi|300924472|ref|ZP_07140442.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 182-1] gi|300929327|ref|ZP_07144801.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 187-1] gi|300947046|ref|ZP_07161268.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 116-1] gi|300957067|ref|ZP_07169312.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 175-1] gi|301027623|ref|ZP_07190944.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 196-1] gi|301305365|ref|ZP_07211460.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 124-1] gi|301325871|ref|ZP_07219304.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 78-1] gi|301646303|ref|ZP_07246193.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 146-1] gi|307137491|ref|ZP_07496847.1| arginine 3rd transport system periplasmic binding protein ArtI [Escherichia coli H736] gi|307311749|ref|ZP_07591389.1| cationic amino acid ABC transporter, periplasmic binding protein [Escherichia coli W] gi|309795342|ref|ZP_07689760.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 145-7] gi|331641384|ref|ZP_08342519.1| arginine-binding periplasmic protein 1 [Escherichia coli H736] gi|331667237|ref|ZP_08368102.1| arginine-binding periplasmic protein 1 [Escherichia coli TA271] gi|331676651|ref|ZP_08377347.1| arginine-binding periplasmic protein 1 [Escherichia coli H591] gi|2507362|sp|P30859|ARTI_ECOLI RecName: Full=Putative ABC transporter arginine-binding protein 2; Flags: Precursor gi|1651396|dbj|BAA35577.1| arginine transporter subunit [Escherichia coli str. K12 substr. W3110] gi|1787088|gb|AAC73950.1| arginine transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|73854884|gb|AAZ87591.1| arginine 3rd transport system periplasmic binding protein [Shigella sonnei Ss046] gi|81244762|gb|ABB65470.1| arginine 3rd transport system periplasmic binding protein [Shigella boydii Sb227] gi|157066066|gb|ABV05321.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli HS] gi|157078667|gb|ABV18375.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli E24377A] gi|169888357|gb|ACB02064.1| arginine transporter subunit; periplasmic-binding component of ABC superfamily [Escherichia coli str. K-12 substr. DH10B] gi|187429749|gb|ACD09023.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Shigella boydii CDC 3083-94] gi|188489915|gb|EDU65018.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli 53638] gi|190903779|gb|EDV63494.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli B7A] gi|192928894|gb|EDV82507.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli E22] gi|194422604|gb|EDX38601.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli 101-1] gi|209911371|dbj|BAG76445.1| arginine ABC transporter substrate binding component [Escherichia coli SE11] gi|218351069|emb|CAU96773.1| arginine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli 55989] gi|218360217|emb|CAQ97767.1| arginine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli IAI1] gi|238860009|gb|ACR62007.1| arginine transporter subunit [Escherichia coli BW2952] gi|242376679|emb|CAQ31391.1| artI, subunit of arginine ABC transporter [Escherichia coli BL21(DE3)] gi|253325151|gb|ACT29753.1| cationic amino acid ABC transporter, periplasmic binding protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972879|gb|ACT38550.1| arginine transporter subunit [Escherichia coli B str. REL606] gi|253977093|gb|ACT42763.1| arginine transporter subunit [Escherichia coli BL21(DE3)] gi|257752804|dbj|BAI24306.1| arginine 3rd transport system periplasmic binding protein ArtI [Escherichia coli O26:H11 str. 11368] gi|257758261|dbj|BAI29758.1| arginine 3rd transport system periplasmic binding protein ArtI [Escherichia coli O103:H2 str. 12009] gi|257763392|dbj|BAI34887.1| arginine 3rd transport system periplasmic binding protein ArtI [Escherichia coli O111:H- str. 11128] gi|260449990|gb|ACX40412.1| cationic amino acid ABC transporter, periplasmic binding protein [Escherichia coli DH1] gi|291323980|gb|EFE63402.1| arginine-binding periplasmic protein 1 [Escherichia coli B088] gi|291434202|gb|EFF07175.1| arginine transport system substrate-binding protein [Escherichia coli B185] gi|299879259|gb|EFI87470.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 196-1] gi|300316152|gb|EFJ65936.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 175-1] gi|300405543|gb|EFJ89081.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 84-1] gi|300411957|gb|EFJ95267.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 115-1] gi|300419357|gb|EFK02668.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 182-1] gi|300453329|gb|EFK16949.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 116-1] gi|300462746|gb|EFK26239.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 187-1] gi|300523515|gb|EFK44584.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 119-7] gi|300530389|gb|EFK51451.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 107-1] gi|300839383|gb|EFK67143.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 124-1] gi|300847385|gb|EFK75145.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 78-1] gi|301075460|gb|EFK90266.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 146-1] gi|306908304|gb|EFN38803.1| cationic amino acid ABC transporter, periplasmic binding protein [Escherichia coli W] gi|308120992|gb|EFO58254.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 145-7] gi|309701141|emb|CBJ00439.1| arginine ABC transporter, substrate-binding protein [Escherichia coli ETEC H10407] gi|315060148|gb|ADT74475.1| arginine transporter subunit [Escherichia coli W] gi|315135512|dbj|BAJ42671.1| arginine transporter subunit [Escherichia coli DH1] gi|315257899|gb|EFU37867.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 85-1] gi|315619870|gb|EFV00389.1| arginine-binding periplasmic protein 1 [Escherichia coli 3431] gi|320175303|gb|EFW50409.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtI [Shigella dysenteriae CDC 74-1112] gi|323155763|gb|EFZ41932.1| arginine-binding periplasmic protein 1 [Escherichia coli EPECa14] gi|323159685|gb|EFZ45664.1| arginine-binding periplasmic protein 1 [Escherichia coli E128010] gi|323165796|gb|EFZ51582.1| arginine-binding periplasmic protein 1 [Shigella sonnei 53G] gi|323172170|gb|EFZ57808.1| arginine-binding periplasmic protein 1 [Escherichia coli LT-68] gi|323175515|gb|EFZ61110.1| arginine-binding periplasmic protein 1 [Escherichia coli 1180] gi|323185173|gb|EFZ70538.1| arginine-binding periplasmic protein 1 [Escherichia coli 1357] gi|323379294|gb|ADX51562.1| cationic amino acid ABC transporter, periplasmic binding protein [Escherichia coli KO11] gi|323942780|gb|EGB38945.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli E482] gi|323947113|gb|EGB43124.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli H120] gi|323962976|gb|EGB58548.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli H489] gi|324015939|gb|EGB85158.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 117-3] gi|324116077|gb|EGC10001.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli E1167] gi|331038182|gb|EGI10402.1| arginine-binding periplasmic protein 1 [Escherichia coli H736] gi|331065593|gb|EGI37486.1| arginine-binding periplasmic protein 1 [Escherichia coli TA271] gi|331075340|gb|EGI46638.1| arginine-binding periplasmic protein 1 [Escherichia coli H591] gi|332097032|gb|EGJ02015.1| arginine-binding periplasmic protein 1 [Shigella boydii 3594-74] gi|332104595|gb|EGJ07941.1| arginine transporter subunit [Shigella sp. D9] Length = 243 Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust. Identities = 48/203 (23%), Positives = 82/203 (40%), Gaps = 34/203 (16%) Query: 47 FAEVKANGDWKGFDVDFCRALSSAI-----FDDPSKIQYLPLNAKERFLALQSKQIDILS 101 F + AN GFDVD +AL I F + + +P +L+ ++++ + Sbjct: 34 FESIDANNQIVGFDVDLAQALCKEIDATCTFSNQAFDSLIP--------SLKFRRVEAVM 85 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 D T RE + L P Y+D + ++ +SV QL G + VQ GTT + + Sbjct: 86 AGMDITPEREKQV-LFTTP--YYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFI- 141 Query: 162 DYFKAHNMKYHP----IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 M HP + ++ + + R D GD + + + D P + Sbjct: 142 -------MDKHPEITTVPYDSYQNAKLDLQNGRIDGVFGDTAVV--TEWLKDNPKLAAVG 192 Query: 218 PDIISK----SPLAPAIIQGDTE 236 + K + L A+ QG+TE Sbjct: 193 DKVTDKDYFGTGLGIAVRQGNTE 215 >gi|294498827|ref|YP_003562527.1| sulfur-containing amino acid ABC transporter sulfur-containing amino acid-binding protein TcyK [Bacillus megaterium QM B1551] gi|294348764|gb|ADE69093.1| sulfur-containing amino acid ABC transporter, sulfur-containing amino acid-binding protein TcyK [Bacillus megaterium QM B1551] Length = 273 Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust. Identities = 38/177 (21%), Positives = 77/177 (43%), Gaps = 11/177 (6%) Query: 54 GDWKGFDVDFCRALSSAIFDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G+ G+DV+ + + + P+ K ++ ++ L+L+S +ID+++ + R+ Sbjct: 57 GNLTGYDVELVKEIDKRL---PNYKFEFKTMDFSNLLLSLESNKIDLVAHQMEVNEERKQ 113 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 P F + K I S+ L+G + V A + + + Y K H K + Sbjct: 114 KFLFNKEPYNIFPLHVVVNEKNTSIKSIKDLNGKKVIVGATSNSANLIDKYNKEHGNKIN 173 Query: 173 PIVF--ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP-SEHVILPDIISKSPL 226 IV+ + ++ + R DA IS +A+ N + +E ++ IS S + Sbjct: 174 -IVYSGQGSDDTKTQLKTGRADAT---ISTPFAVDFVNKQADAEQKVVGPAISNSKV 226 >gi|238063458|ref|ZP_04608167.1| glutamate binding protein [Micromonospora sp. ATCC 39149] gi|237885269|gb|EEP74097.1| glutamate binding protein [Micromonospora sp. ATCC 39149] Length = 326 Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust. Identities = 31/127 (24%), Positives = 56/127 (44%), Gaps = 3/127 (2%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 IK G + G+ A G GFD++ + ++S + DP+KI+Y + + R Sbjct: 84 IKSSGKVTVGVKFDQPNLGYKDAQGKRCGFDIEIAQYVASTLGVDPAKIEYKEIASANRE 143 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASI 148 A++ +ID T R+ ++F + GQ ++ K + I+ L G + Sbjct: 144 TAIKGGEIDYYVGTYSITDKRKND--ISFAGPYFIAGQDLLVRKDETTITGKDTLKGKKV 201 Query: 149 CVQAGTT 155 C G+T Sbjct: 202 CSATGST 208 >gi|298290179|ref|YP_003692118.1| extracellular solute-binding protein family 3 [Starkeya novella DSM 506] gi|296926690|gb|ADH87499.1| extracellular solute-binding protein family 3 [Starkeya novella DSM 506] Length = 270 Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust. Identities = 41/145 (28%), Positives = 60/145 (41%), Gaps = 7/145 (4%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 A L DI G L+C + A+ + GFDVD+C L+ + ++I P Sbjct: 22 QADKLDDIIASGTLRCAVVLDFPPMGSRDASNNPIGFDVDYCNDLAK-VLGVKAEIVETP 80 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVS 141 +R AL S ++D+ +T TL R + G I YF + ++ K GI Sbjct: 81 F--PDRIPALVSGRVDVGVASTSDTLERAKTAGFT---IPYFAFKMVVLTKDGLGIKDYD 135 Query: 142 QLSGASICVQAGTTTELTLADYFKA 166 L G +GT L L KA Sbjct: 136 SLKGKKTGSVSGTFEALALEKDVKA 160 >gi|78062134|ref|YP_372042.1| extracellular solute-binding protein [Burkholderia sp. 383] gi|77970019|gb|ABB11398.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia sp. 383] Length = 298 Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust. Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 16/153 (10%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD-------PS-KI 78 L IK G + GI V F+ D + ++ + R +++ I D P+ + Sbjct: 29 LKKIKDTGVVSLGIRESSVPFSY----SDNQQKNIGYSRDIAARIIDQLKTDLNAPNLAV 84 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + +P+ ++ R LQ+ ID +T TL R+ AF + G F K G+ Sbjct: 85 KEIPITSQNRIPLLQNGTIDFECGSTTNTLERQKQA--AFSNSIFLYGIRFSTRKDSGVK 142 Query: 139 SVSQLSGASICVQAGTTTELTLA--DYFKAHNM 169 + L+G ++ AGT+ E L + KA NM Sbjct: 143 DFADLAGKTVATTAGTSDERLLRKLNEEKAMNM 175 >gi|323490819|ref|ZP_08096020.1| ABC transporter (substrate-binding protein) [Planococcus donghaensis MPA1U2] gi|323395531|gb|EGA88376.1| ABC transporter (substrate-binding protein) [Planococcus donghaensis MPA1U2] Length = 259 Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust. Identities = 35/153 (22%), Positives = 66/153 (43%), Gaps = 16/153 (10%) Query: 16 FFTSFSTNASILG-----------DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F T F+++A +LG +K+ L+ G + F GD GFD+D Sbjct: 7 FITLFASSALVLGACGSSSEEETGSSEKKEVLEMGTSAEFAPFESRNTEGDIVGFDIDLA 66 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 ++ + +++ + ALQ+ ++D++ T R+ ++ F Sbjct: 67 NHIADEL---GYELEITDMKFDGLIGALQNDRVDMVIAGMSATDSRKENVD--FSTEYNH 121 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157 G+ F+ K G++S+ L G ++ VQ GT E Sbjct: 122 SGEMFVTAKDSGLTSLESLEGKTVGVQLGTIQE 154 >gi|207727575|ref|YP_002255969.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia solanacearum MolK2] gi|206590813|emb|CAQ56425.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia solanacearum MolK2] Length = 301 Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust. Identities = 38/194 (19%), Positives = 73/194 (37%), Gaps = 6/194 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQYLP 82 L I+ + G+ + F+ + GF D C + A+ K +Q +P Sbjct: 32 LKKIQDSNTILIGVREASIPFSYRDSKNQIVGFSADLCARVIEAVKQKVGKPDLQVQQIP 91 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R +Q+ +D+ T T L+ AF + + G+ Sbjct: 92 VTSQNRTALVQNGSVDLECGVT--THLKSREQQTAFSTTFFIAATRLLTGVNSGVKDFPD 149 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+G S+ AGTT+E L M + + + E ++ R A+ D L Sbjct: 150 LAGKSVITNAGTTSERILRKMNDEKKMNMNVVSGKDYGESFLTLQSGRVQAFMMDDVLLA 209 Query: 203 ALKLTNDRPSEHVI 216 + +P++ V+ Sbjct: 210 GARTLAQKPADWVV 223 >gi|325121936|gb|ADY81459.1| glutamate/aspartate transport protein (ABC superfamily, peri_bind) [Acinetobacter calcoaceticus PHEA-2] Length = 297 Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust. Identities = 53/244 (21%), Positives = 94/244 (38%), Gaps = 7/244 (2%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 +S + L + TS A L IK G + G + V A G G+ VD C Sbjct: 8 LIISTVMLCTVGATSQIQAADTLAKIKSTGKIVIGHRESSDPISYVVA-GKPVGYAVDIC 66 Query: 65 RALSSAIFDD---PS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ I + P K++Y + + R L + ID+ T + R+ +G F Sbjct: 67 NQFANDIKKELKMPGLKVEYKAVTSSTRIPELLAGNIDMECGTTTNSKQRQQQVG--FST 124 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + GI S++ L+G ++ GTT++ + K + I + Sbjct: 125 NYYATEVRMAVKANSGIKSLADLNGKAVVTTQGTTSDKYIKMNEKGQAVNVQNIYGKDHA 184 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A + R A+ D + L L + P I+ ++S P + + D ++ I Sbjct: 185 DSFAMMASGRAAAFVMDDNILAGLIAKSSTPKAFAIVGPVLSSEPYGIMLAKDDPKFKAI 244 Query: 241 VSWT 244 T Sbjct: 245 ADRT 248 >gi|299068342|emb|CBJ39566.1| glutamate/aspartate transport protein; ABC superfamily, periplasmic binding component [Ralstonia solanacearum CMR15] Length = 301 Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust. Identities = 39/194 (20%), Positives = 73/194 (37%), Gaps = 6/194 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQYLP 82 L I+ + G+ + F+ + GF D C + A+ K +Q +P Sbjct: 32 LKKIQDSNTILIGVRESSIPFSYRDSKNQIIGFSADLCTRVIDAVKQKVGKPDLQVQQIP 91 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R +Q+ +D+ T T L+ AF + + G+ Sbjct: 92 VTSQNRTALVQNGSVDLECGVT--THLKSREQQTAFSTTFFIAATRLLTSVHSGVKDFPD 149 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+G S+ AGTT+E L M + I + E ++ R A+ D L Sbjct: 150 LAGKSVITNAGTTSERILRKMNDEKKMSMNVISGKDYGESFLTLQSGRVQAFMMDDVLLA 209 Query: 203 ALKLTNDRPSEHVI 216 + +P++ V+ Sbjct: 210 GARTLAQKPADWVV 223 >gi|222084793|ref|YP_002543322.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221722241|gb|ACM25397.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 291 Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust. Identities = 44/149 (29%), Positives = 66/149 (44%), Gaps = 13/149 (8%) Query: 53 NGDWKGFDVDFCRALSSAI-FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 NG GF VD R + + D +IQ LP +E AL + Q D + T E Sbjct: 77 NGKLSGFHVDLAREICDELGISDKCQIQALPF--EELQGALSASQGDAVIAGVAVT--PE 132 Query: 112 ISLGLAF-RPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHN 168 + AF RP + F+ + K I + + L+G S+ V GTT E LA +F A Sbjct: 133 LRKSFAFSRPFLMLPAR-FVRNLKAPIDGRTAAALAGHSVGVVKGTTHEAMLAAFFPAIK 191 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + + F+ + + AA + + DA D Sbjct: 192 L----VPFDDKDALLAAVKDGKVDAGFAD 216 >gi|269139576|ref|YP_003296277.1| cationic amino acid ABC transporter, periplasmic binding protein [Edwardsiella tarda EIB202] gi|267985237|gb|ACY85066.1| cationic amino acid ABC transporter, periplasmic binding protein [Edwardsiella tarda EIB202] gi|304559464|gb|ADM42128.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtI [Edwardsiella tarda FL6-60] Length = 256 Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust. Identities = 36/160 (22%), Positives = 70/160 (43%), Gaps = 20/160 (12%) Query: 47 FAEVKANGDWKGFDVDFCRAL-----SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101 F + A +GFDVD A+ ++ F + S +P +L+ K++D + Sbjct: 47 FEFMDAQNKMQGFDVDLANAICQQMKATCTFSNQSFDSLIP--------SLKFKRVDAVI 98 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 D T R+ + + +P Y+D + +K ++ V+ L G + +Q GTT + L Sbjct: 99 SGMDITPERQKQVDFS-QP--YYDNSALFIAEKGKVADVAALKGKRVGIQNGTTHQKYLM 155 Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 D + + P+ ++ + + R DA GD + + Sbjct: 156 D----KHPELTPVPYDSYQNAILDLKNGRIDAVFGDTAVV 191 >gi|78065231|ref|YP_368000.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia sp. 383] gi|77965976|gb|ABB07356.1| L-glutamate-binding protein / L-aspartate-binding protein [Burkholderia sp. 383] Length = 297 Score = 40.4 bits (93), Expect = 0.35, Method: Compositional matrix adjust. Identities = 44/219 (20%), Positives = 88/219 (40%), Gaps = 6/219 (2%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQYLP 82 L IK G + G + F+ N G+ +F + A+ + P+ +++ +P Sbjct: 28 LKKIKDTGVIALGHRESSIPFSYYDQNQQVVGYSREFQLKVVDAVKKKLNLPNLQVKNIP 87 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R +Q+ +DI +T R+ AF + G + K G+ + Sbjct: 88 VTSQNRIPLVQNGTVDIECGSTTNNAERQQQA--AFSDTIFVIGTRLMTKKDSGVKDFAD 145 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G ++ AGTT+E L + + I + + + R A+ D + L Sbjct: 146 LKGKTVVTTAGTTSERLLRKMNNDKQLGMNIISAKDHGDSFNTLESGRAVAFMMDDALLA 205 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + +P E VI+ S+ + +GD ++ +V Sbjct: 206 GERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDADFKKVV 244 >gi|253687586|ref|YP_003016776.1| extracellular solute-binding protein family 3 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251754164|gb|ACT12240.1| extracellular solute-binding protein family 3 [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 298 Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust. Identities = 36/155 (23%), Positives = 63/155 (40%), Gaps = 6/155 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 A L +K G + G V F+ G+ + + A+ D P+ +++ Sbjct: 26 AGTLKKVKDNGVIVIGHRESSVPFSYYDNTQKVVGYSQAYSDKIVEAVKKKLDAPNLQVK 85 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 LP+ ++ R LQ+ D +T L R+ AF + G + K G+ Sbjct: 86 LLPITSQNRIPLLQNGTFDFECGSTTNNLERQKQA--AFSNTIFVVGTRLLTKKDSGVKD 143 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 L+G ++ V +GTT+E+ L + MK I Sbjct: 144 FPDLAGKTVVVTSGTTSEVLLNKLNEEKQMKMRII 178 >gi|300310826|ref|YP_003774918.1| amino-acid ABC transporter periplasmic protein [Herbaspirillum seropedicae SmR1] gi|300073611|gb|ADJ63010.1| ABC-type amino-acid transport system, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 267 Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust. Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 3/88 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 + D+ K+G + G+ +G F V A G G+DVD + + ++ +PL Sbjct: 33 IADLTKKGKITIGVVSGTPPFGSVDAKGTPIGYDVDVANLIGKYLG---LPVEIVPLVPP 89 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISL 114 R AL+S ++D+L+ T R S+ Sbjct: 90 ARIPALESGKVDMLAATLAPTPERAKSV 117 >gi|83746634|ref|ZP_00943684.1| Glutamate/aspartate-binding protein [Ralstonia solanacearum UW551] gi|207727924|ref|YP_002256318.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia solanacearum MolK2] gi|207742329|ref|YP_002258721.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia solanacearum IPO1609] gi|83726768|gb|EAP73896.1| Glutamate/aspartate-binding protein [Ralstonia solanacearum UW551] gi|206591166|emb|CAQ56778.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia solanacearum MolK2] gi|206593719|emb|CAQ60646.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia solanacearum IPO1609] Length = 298 Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust. Identities = 44/227 (19%), Positives = 88/227 (38%), Gaps = 6/227 (2%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS----KIQYLP 82 L IK G + G+ + F+ G+ D + A+ D +++ +P Sbjct: 29 LKKIKDTGTITLGVRDSSIPFSYNVGGVRTIGYSYDVATKIVEAVKDQLKLKDLQVKEIP 88 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R LQ+ ID+ +T L R+ +F + G ++ K GI + Sbjct: 89 VTSQNRITLLQNGTIDLECGSTTNNLERQKQA--SFTDTIFIIGTRIMVKKDSGIKDWAD 146 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G ++ AGTT+E L + + I + + + R A+ D + LY Sbjct: 147 LKGKNVVTTAGTTSERLLRKMNDDKQLGMNIISTKDHGQSFLTLESGRAVAFMMDDALLY 206 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 + P++ V++ S+ + + D + + T M+ Sbjct: 207 GERAKAKNPADWVVVAKPQSREAYGCMLRKDDAPFKTLADKTIAGMM 253 >gi|213586572|ref|ZP_03368398.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 232 Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust. Identities = 47/213 (22%), Positives = 85/213 (39%), Gaps = 11/213 (5%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 +K+RG L G+ F+ +G GF+VDF AL+ + K P Sbjct: 3 VKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVDFAEALAKHL---GVKASLKPTKWDGML 59 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASI 148 +L SK+ID++ + +R+ + P T Q + +G I + + L G + Sbjct: 60 ASLDSKRIDVVINQVTISDVRKKKYDFS-TPYTVSGVQALVKKGNEGTIKTAADLQGKKV 118 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 V GT E L + + +++ + + +++ R R DA + L AL L Sbjct: 119 GVGLGTNYEEWLRQHVQGVDIRTYDDDPTKYQDL----RVGRIDAIL--VDRLAALDLVK 172 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + D S+ A+ +G+ + V Sbjct: 173 KTKGTLAVTGDAFSRQESGVALRKGNEDLLKAV 205 >gi|308177955|ref|YP_003917361.1| glutamate ABC transporter substrate-binding protein GluB [Arthrobacter arilaitensis Re117] gi|307745418|emb|CBT76390.1| glutamate ABC transporter, substrate-binding protein GluB [Arthrobacter arilaitensis Re117] Length = 276 Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust. Identities = 27/124 (21%), Positives = 57/124 (45%), Gaps = 3/124 (2%) Query: 51 KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 K ++ GFDVD + ++ + +I+++ + R LQ+ Q+D++ +++ Sbjct: 50 KDGDNYTGFDVDVAKYVAGELGYTEDQIEFISAPSANRETMLQNDQVDMIFAT--YSITD 107 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD-YFKAHNM 169 E + + F + GQ ++ I L G ++C G+T+ + D Y K N+ Sbjct: 108 ERNKVVDFAGPYFVAGQDLLVPNDSDIKGPEDLDGKNLCSVTGSTSAQKVKDNYAKNTNL 167 Query: 170 KYHP 173 + P Sbjct: 168 QELP 171 >gi|331008688|gb|EGH88744.1| putative ABC transporter exported solute-binding protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 279 Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust. Identities = 37/159 (23%), Positives = 66/159 (41%), Gaps = 7/159 (4%) Query: 11 CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSS 69 L ++ + + L I +R + G+ F + A GD +G++V+ + L+ Sbjct: 12 ALGLILCAGLAQADATLERINERHKVSVGVLLSGPPFGTIDPATGDHQGYNVELSKELAK 71 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD-GQG 128 + D + L A R LQ ++D+L N +T E + L + P Y + G Sbjct: 72 RLSVDLETVSVL---APNRVQFLQQGKVDLLIANMQFT--EERAQILDYVPTPYEEVGGA 126 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 ++ K GIS G +CV G+ L + + A Sbjct: 127 ALVRKGSGISMWEDFKGKPVCVSQGSNFIKPLQELYGAQ 165 >gi|257488014|ref|ZP_05642055.1| putative ABC transport system, exported solute-binding protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 267 Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust. Identities = 37/159 (23%), Positives = 66/159 (41%), Gaps = 7/159 (4%) Query: 11 CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSS 69 L ++ + + L I +R + G+ F + A GD +G++V+ + L+ Sbjct: 12 ALGLILCAGLAQADATLERINERHKVSVGVLLSGPPFGTIDPATGDHQGYNVELSKELAK 71 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD-GQG 128 + D + L A R LQ ++D+L N +T E + L + P Y + G Sbjct: 72 RLSVDLETVSVL---APNRVQFLQQGKVDLLIANMQFT--EERAQILDYVPTPYEEVGGA 126 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 ++ K GIS G +CV G+ L + + A Sbjct: 127 ALVRKGSGISMWEDFKGKPVCVSQGSNFIKPLQELYGAQ 165 >gi|259908946|ref|YP_002649302.1| Arginine-binding periplasmic protein 1 [Erwinia pyrifoliae Ep1/96] gi|224964568|emb|CAX56081.1| Arginine-binding periplasmic protein 1 [Erwinia pyrifoliae Ep1/96] gi|283478952|emb|CAY74868.1| Arginine ABC transport system, periplasmic component [Erwinia pyrifoliae DSM 12163] gi|310767151|gb|ADP12101.1| Arginine-binding periplasmic protein 1 [Erwinia sp. Ejp617] Length = 243 Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 66/160 (41%), Gaps = 20/160 (12%) Query: 47 FAEVKANGDWKGFDVDFCRALSSAI-----FDDPSKIQYLPLNAKERFLALQSKQIDILS 101 F + AN +GFDVD AL I F + + +P RF A+ S +DI Sbjct: 34 FEFIDANNKIQGFDVDLANALCREIDADCTFTNQAFDSLIPSLKFRRFDAVMSG-MDITP 92 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 L + Y+D + +K ++SV L G + VQ GTT + +A Sbjct: 93 EREKQVLFTQ----------AYYDNSALFITQKGKVTSVDALKGKRVGVQNGTTHQKYIA 142 Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 + K ++K P ++ + + R DA GD + + Sbjct: 143 E--KLPDVKVVP--YDSYQNAILDLKNGRIDAVFGDTAVV 178 >gi|254471178|ref|ZP_05084580.1| cystine ABC transporter, cystine-binding protein [Pseudovibrio sp. JE062] gi|211959324|gb|EEA94522.1| cystine ABC transporter, cystine-binding protein [Pseudovibrio sp. JE062] Length = 280 Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust. Identities = 35/178 (19%), Positives = 73/178 (41%), Gaps = 32/178 (17%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 SI+ L +L + + ++ + + ++ N+G + + A+G ++G+D+D + + Sbjct: 12 SIVGLSLLAVSQPVFSGEVMDRVMETKVIRVATNSGYPPASYLNADGVFEGYDIDVSKEV 71 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG-----------L 116 + + AK FL + I + W E+S+G L Sbjct: 72 AKR------------MGAKAEFLNPAWEAI----TSGKWGGRWEMSIGSMTPTPARAKVL 115 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F + Y+ F +HK ++ +L+G I G+T E Y+ H ++ P+ Sbjct: 116 DFPAVYYYTPAAFYVHKDSSYETLIELNGKRIGASTGSTFE-----YYLQHELELDPV 168 >gi|16765292|ref|NP_460907.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167993523|ref|ZP_02574617.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|4115511|dbj|BAA36399.1| FliY [Salmonella enterica subsp. enterica serovar Typhimurium] gi|16420489|gb|AAL20866.1| putative periplasmic binding transport protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|205328406|gb|EDZ15170.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|261247120|emb|CBG24943.1| cystine-binding periplasmic protein (FliY) [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267993940|gb|ACY88825.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301158468|emb|CBW17978.1| cystine-binding periplasmic protein (FliY) [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312912944|dbj|BAJ36918.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321224597|gb|EFX49660.1| Cystine ABC transporter, periplasmic cystine-binding protein FliY [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323130232|gb|ADX17662.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] Length = 266 Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust. Identities = 49/224 (21%), Positives = 91/224 (40%), Gaps = 12/224 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 SF+ + +L +K+RG L G+ F+ +G GF+VDF AL+ + K Sbjct: 27 SFA-DEGLLNKVKERGTLLVGLEGTYPPFSFQGEDGKLTGFEVDFAEALAKHL---GVKA 82 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-I 137 P +L +K+ID++ + +R+ + P T Q + +G I Sbjct: 83 SLKPTKWDGMLASLDAKRIDVVINQVTISDVRKKKYDFS-TPYTVSGIQALVKKGNEGTI 141 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + + L G + V GT E L + + +++ + + +++ R R DA Sbjct: 142 KTAADLQGKKVGVGLGTNYEEWLRQHVQGVDIRTYDDDPTKYQDL----RVGRIDAIL-- 195 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + L AL L + D S+ A+ +G+ + V Sbjct: 196 VDRLAALDLVKKTKGTLAVTGDAFSRQESGVALRKGNEDLLKAV 239 >gi|83746015|ref|ZP_00943071.1| Glutamate/aspartate-binding protein [Ralstonia solanacearum UW551] gi|207741963|ref|YP_002258355.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia solanacearum IPO1609] gi|83727409|gb|EAP74531.1| Glutamate/aspartate-binding protein [Ralstonia solanacearum UW551] gi|206593349|emb|CAQ60276.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia solanacearum IPO1609] Length = 301 Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust. Identities = 38/194 (19%), Positives = 73/194 (37%), Gaps = 6/194 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQYLP 82 L I+ + G+ + F+ + GF D C + A+ K +Q +P Sbjct: 32 LKKIQDSNTILIGVREASIPFSYRDSKNQIVGFSADLCARVIEAVKQKVGKPDLQVQQIP 91 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R +Q+ +D+ T T L+ AF + + G+ Sbjct: 92 VTSQNRTALVQNGSVDLECGVT--THLKSREQQTAFSTTFFIAATRLLTGVSSGVKDFPD 149 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+G S+ AGTT+E L M + + + E ++ R A+ D L Sbjct: 150 LAGKSVITNAGTTSERILRKMNDEKKMNMNVVSGKDYGESFLTLQSGRVQAFMMDDVLLA 209 Query: 203 ALKLTNDRPSEHVI 216 + +P++ V+ Sbjct: 210 GARTLAQKPADWVV 223 >gi|170719627|ref|YP_001747315.1| extracellular solute-binding protein [Pseudomonas putida W619] gi|169757630|gb|ACA70946.1| extracellular solute-binding protein family 3 [Pseudomonas putida W619] Length = 266 Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust. Identities = 53/246 (21%), Positives = 99/246 (40%), Gaps = 14/246 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + +L + S A + D KRG L+ G++ + F G+ GF+ Sbjct: 1 MMKKYLSRLLVGVTALVAVASAQAGAIDDAVKRGTLRVGMDPTYMPFQMTNKRGEIIGFE 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A++ ++ K++ + AL + + D++ + TL +E +L L F Sbjct: 61 VDILKAMAKSM---GVKLETVSTAYDGIIPALLTDKFDMIG--SGMTLTQERNLRLNFSE 115 Query: 121 ITYFDGQGFIMHKKKG--ISSVSQLSGAS--ICVQAGTTTELTLADYFKAHNMKYHPIVF 176 GQ ++ K I S L+ I + GTT E+ YH Sbjct: 116 PFIVVGQTLLIRKDLAGEIKSYKDLNNEKYRITSKLGTTGEMVAKKLIAKAT--YHGYDN 173 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E+ +D + DA+ D + + + + + L + + PLA + +GD + Sbjct: 174 EQEAVMDVV--NGKADAFVYD-APYNVVAVDKAGAGKLLFLEEPFTYEPLAFGLKKGDYD 230 Query: 237 WYNIVS 242 N ++ Sbjct: 231 SINFIN 236 >gi|146339752|ref|YP_001204800.1| glutamate/aspartate periplasmic-binding protein [Bradyrhizobium sp. ORS278] gi|146192558|emb|CAL76563.1| Putative extracellular solute-binding protein, family 3 ; putative glutamate/aspartate periplasmic-binding protein [Bradyrhizobium sp. ORS278] Length = 302 Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust. Identities = 47/235 (20%), Positives = 92/235 (39%), Gaps = 9/235 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD----DPSKIQYLP 82 L +K+ G + G + F+ + N GF +D C + I D +++ P Sbjct: 29 LQKVKETGTITIGYRETSLPFSYIDDNQKPLGFALDICGKIVDEIKATLKLDKLEVKLTP 88 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF-DGQGFIMHKKKGISSVS 141 +++ R + + ID+ +T L R+ + + TYF ++ G+ ++ Sbjct: 89 VSSATRIPLMANGTIDLECASTTNNLERQRLVSFSH---TYFLTASRYVAKAASGLKTID 145 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L G ++ +GT+ L + A + + + + E R DAY D L Sbjct: 146 DLKGKTVASTSGTSNIKQLYEANTARQLGLNIVAAKDNAEGFLMVENGRADAYVMDDILL 205 Query: 202 YALKLTNDRPSEHVILPDIIS-KSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L + PS++ I D S P + + D + +V + T+ E+ Sbjct: 206 AGLVASAKAPSDYAISTDQFSMPEPYGIMLRKDDPAFKTVVDRATAKLYTSPEIA 260 >gi|90414857|ref|ZP_01222823.1| putative amino acid ABC transporter [Photobacterium profundum 3TCK] gi|90324035|gb|EAS40626.1| putative amino acid ABC transporter [Photobacterium profundum 3TCK] Length = 269 Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust. Identities = 43/174 (24%), Positives = 75/174 (43%), Gaps = 12/174 (6%) Query: 3 KDFFVSILCLIILFF--TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 K + L +I L + + S L DIK+RG L+ G++T V +A G+ GF+ Sbjct: 2 KKLLAACLAVITLMMGTNALAAEKSTLIDIKERGTLRVGLST-FVPWAMRDKQGELVGFE 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD R L+ D K++++P AL + + D++ T R +S+ L P Sbjct: 61 VDVARRLAK---DAGLKVEFIPTAWDGIIPALLAGKFDVIIGGLSITPQRNMSV-LFTAP 116 Query: 121 ITYFDGQGFIMHKKKGISSVS----QLSGASICVQAGTTTELTLADYFKAHNMK 170 + G +K+K ++ ++ V+ G T T YF ++ Sbjct: 117 YAH-SGVQLAANKEKSADKLTIADYNKRSVTLSVRRGAFTVETAKKYFPKAKLR 169 >gi|152965465|ref|YP_001361249.1| extracellular solute-binding protein family 3 [Kineococcus radiotolerans SRS30216] gi|151359982|gb|ABS02985.1| extracellular solute-binding protein family 3 [Kineococcus radiotolerans SRS30216] Length = 305 Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust. Identities = 53/255 (20%), Positives = 107/255 (41%), Gaps = 21/255 (8%) Query: 30 IKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 IK G + G+ G + A +G++ GFD++ + +++ + P +I ++ + R Sbjct: 64 IKAAGKVVIGVKADQPGIGQKDAGSGEYTGFDIEMAKLMAANLGLTPDEIDFVETVSANR 123 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGAS 147 LQ +D++ + +T+ + + F Y GQ ++ ++ I+ L+G Sbjct: 124 EPFLQQGTVDMVIAS--YTINDKRKQVVDFAGPYYVAGQDLLVRADEEEITGPDALAGKK 181 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL--YALK 205 +C G+T + D + + F+ + ++ DA T D + L YA + Sbjct: 182 VCSVEGSTPATRIRDEHPDAQL----VTFDAYSKCVEQLTSNAVDAVTTDDAILRGYAAQ 237 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV- 264 +P ++ S+ P + +GDT N + + A+ TA E G +K + Sbjct: 238 ----QPEALKVVGAPFSEEPYGIGLPKGDTALRNAL---NDAIETAVEDGDWKKAYDHTL 290 Query: 265 ---SKDTTNPDVQRF 276 D P V R+ Sbjct: 291 GGSGTDPEPPTVDRY 305 >gi|330430558|gb|AEC21892.1| family 3 extracellular solute-binding protein [Pusillimonas sp. T7-7] Length = 308 Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust. Identities = 41/162 (25%), Positives = 68/162 (41%), Gaps = 11/162 (6%) Query: 8 SILCLIILFF--TSFSTNASILGDIKK---RGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 ++L IL F TS ++ + G +KK G + G + F+ G+ +D Sbjct: 15 ALLAAGILAFASTSLASTPELTGTLKKIKDEGVVVLGYREASIPFSYYDDAKQPIGYSID 74 Query: 63 FCRALSSAIFDD---PS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 + + I D P KI+ LP+ ++ R LQ+ D T RE + F Sbjct: 75 YTNLILERIKQDLDLPQLKIRKLPITSQNRISLLQNGTFDFECTTTTHNASREKQVD--F 132 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 + G ++ K GI+ L ++ V AGTT+E+ L Sbjct: 133 SNSLFVIGTRLLVKKDSGINDFDDLKDTNVVVGAGTTSEILL 174 >gi|157369457|ref|YP_001477446.1| glutamate and aspartate transporter subunit [Serratia proteamaculans 568] gi|157321221|gb|ABV40318.1| extracellular solute-binding protein family 3 [Serratia proteamaculans 568] Length = 298 Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust. Identities = 48/231 (20%), Positives = 88/231 (38%), Gaps = 6/231 (2%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQYLP 82 L IK G + G V F+ G+ D+ + A+ + P +++ LP Sbjct: 29 LKKIKDNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNQIVEAVKKKLNAPDLQVKMLP 88 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R LQ+ D +T L R+ AF + G ++ K + Sbjct: 89 ITSQNRIPLLQNGTFDFECGSTTNNLERQKQA--AFSDTIFVVGTRLLVKKGSDVKDFKD 146 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+G + V +GTT+E+ L + M I + + + R A+ D + L Sbjct: 147 LAGKPVVVTSGTTSEVLLNKLNDSGKMNMRIISAKDHGDSFRTLESGRAVAFMMDDALLA 206 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 + +P + I+ SK + + D E+ +V T T+ E Sbjct: 207 GERAKAKKPDQWEIIATPQSKEAYGCMLRKDDPEFKKLVDDTIAQAQTSGE 257 >gi|116748259|ref|YP_844946.1| extracellular solute-binding protein [Syntrophobacter fumaroxidans MPOB] gi|116697323|gb|ABK16511.1| extracellular solute-binding protein, family 3 [Syntrophobacter fumaroxidans MPOB] Length = 268 Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust. Identities = 56/239 (23%), Positives = 96/239 (40%), Gaps = 22/239 (9%) Query: 9 ILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 + C I T F + S+L + KR L G+ F G GFDV+ L Sbjct: 16 LTCGIAFAVTPFEVFDGSVLNQVIKRNKLMVGMEVKFFPFEYADEKGRPLGFDVEIA-GL 74 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 ++ +I+ + + ALQ ++D++ TL R + ++F + G Sbjct: 75 AAKELGVELEIKDMEFSG--LIPALQGGKVDMIISGMTRTLTRAKT--VSFTQAYFETGL 130 Query: 128 GFIMHKKKG--ISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 ++ ++ + V +L+ G I V+ GTT +L A F + R +E Sbjct: 131 CALLSNRRAPDVKDVKELNAPGRVIAVKLGTTGDLVTAKMFPEAQVN-------RYKEET 183 Query: 184 AAYR---AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 A R R DA+ D ++ N + V+ P + P A AI +GD ++ N Sbjct: 184 ACVREVVTGRADAFLYDQLSIGKHHKENPDTTHAVLTP--FTYEPFAIAIRKGDPDFLN 240 >gi|270489688|ref|ZP_06206762.1| glutamate-aspartate periplasmic-binding protein [Yersinia pestis KIM D27] gi|270338192|gb|EFA48969.1| glutamate-aspartate periplasmic-binding protein [Yersinia pestis KIM D27] Length = 259 Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust. Identities = 44/218 (20%), Positives = 91/218 (41%), Gaps = 9/218 (4%) Query: 58 GFDVDFCRALSSAI---FDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ D+ + AI + P+ +++ +P+ ++ R LQ+ D +T L R+ Sbjct: 21 GYSQDYSNLIVDAIRKELNAPNLEVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQQQ 80 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 AF + G + K + L+G ++ V +GTT+E+ L + NM Sbjct: 81 A--AFSNTIFVVGTRLLTKKDSEVKDFKDLAGKAVVVTSGTTSEVLLNKLNEKDNMNMRI 138 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + + + R A+ D + L + +P E I+ S+ + + Sbjct: 139 ISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDEWSIVGTPQSEEAYGCMMRKN 198 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 D + ++ T + TA+ G+ +K+ ++ K+ P Sbjct: 199 DPAFKALLDKT---IATAQTTGVAEKSFDRWFKNPIPP 233 >gi|221209879|ref|ZP_03582860.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia multivorans CGD1] gi|221170567|gb|EEE03033.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia multivorans CGD1] Length = 317 Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust. Identities = 51/235 (21%), Positives = 87/235 (37%), Gaps = 14/235 (5%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD-------PS-KI 78 L IK G + GI V F+ D + ++ + R +++ I D P + Sbjct: 48 LKKIKDTGVVSLGIRESSVPFSY----SDNQQKNIGYSRDIAARIIDQLKTDLNLPGLTV 103 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + +P+ ++ R LQ+ ID +T TL R+ AF + G F K G+ Sbjct: 104 KEIPITSQNRIPLLQNGTIDFECGSTTNTLERQKQA--AFSNSIFLYGIRFSTRKDSGVK 161 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 L+G ++ AGT+ E L + M I + E R A+ D Sbjct: 162 DFPDLAGKTVATTAGTSDERLLRKLNEEKGMNMTIISAKDHAEAFMNVTTGRAVAFVMDE 221 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 LY + P + + + A + + D + +V M T+ E Sbjct: 222 PLLYGEIAKDRNPGAYTVTGTPLMHENYACMMRKDDPAFKRVVDGVIAKMQTSGE 276 >gi|110801642|ref|YP_698644.1| amino acid ABC transporter (binding protein) [Clostridium perfringens SM101] gi|110682143|gb|ABG85513.1| amino acid ABC transporter, amino acid-binding protein [Clostridium perfringens SM101] Length = 262 Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust. Identities = 51/223 (22%), Positives = 88/223 (39%), Gaps = 12/223 (5%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 + I+ L IL F S D K + G++ V NGD GFDVD Sbjct: 7 LLIGIVILSILIFGCSSKKIETKKDSNK---VIIGMDETFVPMGFKNENGDIVGFDVDLA 63 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 + + K+ + P++ + L + ID++ +T+ E +AF Sbjct: 64 KEAFKRM---NLKVIFQPIDWSMKETELTNGNIDLIWNG--YTMTPEREKKVAFTNSYLK 118 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD--YFKAHNMKYHPIVFERVEEI 182 + Q + I+++ L G ++ Q G+++ TL + P++F+ + Sbjct: 119 NRQVIVTLSNSNINTLKDLKGKTVTTQDGSSSLDTLFENPELTKSFKNGEPVLFDSFNDC 178 Query: 183 DAAYRAHRCDAYTGD-ISALYALKLTNDRPSEHVILPDIISKS 224 A R DA D I A Y + ND HV+ D+ +S Sbjct: 179 FMDLEAGRSDAVVCDEILAQYYI-FKNDPSKFHVLTEDLGEES 220 >gi|300868858|ref|ZP_07113464.1| putative amino acid ABC transporter,substrate-binding protein [Oscillatoria sp. PCC 6506] gi|300333075|emb|CBN58656.1| putative amino acid ABC transporter,substrate-binding protein [Oscillatoria sp. PCC 6506] Length = 285 Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust. Identities = 50/228 (21%), Positives = 98/228 (42%), Gaps = 19/228 (8%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 S + S L I G ++ + F V + +G+D+D + L+ ++ K+ Sbjct: 43 STAPGTSTLDKIISAGKVRIAVPQDSPPFGSVGTDMQPQGYDIDVAKMLAESL---EVKL 99 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI- 137 + +P+ + R LQS ++D++ + T R S+ + ++ G ++ GI Sbjct: 100 ELVPVTSTNRIPYLQSDRVDLVISSLGATPERAKSIYFSIAYAPFYSG----IYGFPGIN 155 Query: 138 -SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY-T 195 SS + LSG ++ V G+ ++ LA K FE +A A + + T Sbjct: 156 ASSYTDLSGKTVGVTQGSLEDIELA---KRAPKDIQIKRFEDNSTTASALLAGQIELMAT 212 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD---TEWYNI 240 G+ A K++ D P + + ++ SP + +GD +W N+ Sbjct: 213 GNT---IANKISKDNPDKKIENKFVMKNSPCYIGVRRGDLDLLQWVNV 257 >gi|315173030|gb|EFU17047.1| ABC transporter, permease protein [Enterococcus faecalis TX1346] Length = 722 Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust. Identities = 57/219 (26%), Positives = 89/219 (40%), Gaps = 23/219 (10%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K F +S +++ T F + S + KK G + F + G + G DVD Sbjct: 4 KHFLLSFFVMMVTLLT-FISGTSAHAEGKK---YTIGTDLTFAPFEFQDSKGKYIGIDVD 59 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A++ D ++ PL A+QSKQID + T R+ S + P Sbjct: 60 LLDAIAK---DQDFEVDLKPLGFDSAVQAIQSKQIDGMIAGMSITDERKKSFDFS-DP-- 113 Query: 123 YFDGQGFIMHKKKG---ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV--FE 177 YFD + KKG I S L G ++ + GT + A++ + + KY + F+ Sbjct: 114 YFD-SSLQLAVKKGNDKIKSYDDLKGKTVAAKVGTES----ANFLEKNKEKYDYTIKNFD 168 Query: 178 RVEEIDAAYRAHRCDAYTGDISAL-YALKLTNDRPSEHV 215 + A DA D L YA+K ND+ + V Sbjct: 169 DATGLYKALENGEADAIVDDYPVLGYAVK--NDQKLQLV 205 >gi|288550055|ref|ZP_05969127.2| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Enterobacter cancerogenus ATCC 35316] gi|288316573|gb|EFC55511.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Enterobacter cancerogenus ATCC 35316] Length = 316 Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust. Identities = 34/140 (24%), Positives = 59/140 (42%), Gaps = 6/140 (4%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQY 80 S L I K G + G V F+ G+ D+ A+ A+ + P +++ Sbjct: 45 STLAKIAKNGVIVVGHRESSVPFSYYDNTQKVVGYSQDYSNAIVEAVKKKLNKPDLQVKL 104 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +P+ ++ R LQ+ D +T L R+ AF + G + K I Sbjct: 105 IPITSQNRIPLLQNGTFDFECGSTTNNLERQKQA--AFSDTIFVVGTRLLTKKGGDIKDF 162 Query: 141 SQLSGASICVQAGTTTELTL 160 + L G ++ V +GTT+E+ L Sbjct: 163 ADLKGKAVVVTSGTTSEVLL 182 >gi|134293771|ref|YP_001117507.1| extracellular solute-binding protein [Burkholderia vietnamiensis G4] gi|134136928|gb|ABO58042.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia vietnamiensis G4] Length = 298 Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust. Identities = 39/149 (26%), Positives = 62/149 (41%), Gaps = 8/149 (5%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR----ALSSAIFDDPSKIQYLP 82 L IK G + GI V F+ + G+ D AL + + ++ +P Sbjct: 29 LKKIKDTGVVSLGIRESSVPFSYSDNQQNNIGYSRDIAARIIDALKAELKAPNLTVKEIP 88 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R LQ+ ID +T TL R+ AF + G F K G+ + Sbjct: 89 ITSQNRIPLLQNGTIDFECGSTTNTLERQKQA--AFSNSIFLYGIRFSTRKDSGVKDFAD 146 Query: 143 LSGASICVQAGTTTELTLA--DYFKAHNM 169 L+G ++ AGT+ E L + KA NM Sbjct: 147 LAGKTVATTAGTSDERLLRKLNEEKAMNM 175 >gi|154246016|ref|YP_001416974.1| extracellular solute-binding protein [Xanthobacter autotrophicus Py2] gi|154160101|gb|ABS67317.1| extracellular solute-binding protein family 3 [Xanthobacter autotrophicus Py2] Length = 269 Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust. Identities = 31/144 (21%), Positives = 64/144 (44%), Gaps = 9/144 (6%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 S + A L DI K G ++ + F V + G+D+D +++ + K Sbjct: 28 STAARADTLDDIMKAGVIRIAVPQDFPPFGSVGVDLKPLGYDIDVANLIAAKLG---VKA 84 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLRE--ISLGLAFRPITYFDGQGFIMHKKKG 136 + +P+ + R LQ+K++D++ + RE + +A+ P +F+ G Sbjct: 85 ELVPVTSANRIPYLQTKKVDLVISSLGKNPEREKVMDFSVAYAP--FFN--GIFGPADVK 140 Query: 137 ISSVSQLSGASICVQAGTTTELTL 160 + V ++G ++ V G+ +L L Sbjct: 141 VEKVEDIAGMTVGVTRGSVEDLEL 164 >gi|194428243|ref|ZP_03060786.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli B171] gi|194413803|gb|EDX30082.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli B171] Length = 243 Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust. Identities = 48/203 (23%), Positives = 82/203 (40%), Gaps = 34/203 (16%) Query: 47 FAEVKANGDWKGFDVDFCRALSSAI-----FDDPSKIQYLPLNAKERFLALQSKQIDILS 101 F + AN GFDVD +AL I F + + +P +L+ ++++ + Sbjct: 34 FESIDANNQIVGFDVDLAQALCKEIDATCTFSNQAFDSLIP--------SLKFRRVEAVM 85 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 D T RE + L P Y+D + ++ +SV QL G + VQ GTT + + Sbjct: 86 AGMDITPEREKQV-LFTTP--YYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFI- 141 Query: 162 DYFKAHNMKYHP----IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 M HP + ++ + + R D GD + + + D P + Sbjct: 142 -------MDKHPEITTVPYDSYQNAKLDLQNGRIDGVFGDTAVV--TEWLKDSPKLAAVG 192 Query: 218 PDIISK----SPLAPAIIQGDTE 236 + K + L A+ QG+TE Sbjct: 193 DKVTDKDYFGTGLGIAVRQGNTE 215 >gi|322392131|ref|ZP_08065593.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus peroris ATCC 700780] gi|321145031|gb|EFX40430.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus peroris ATCC 700780] Length = 280 Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 9/112 (8%) Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 +GF E NG + GFD+D +A+S + K+ + P++ + LQ+ ID + Sbjct: 53 MGFEE--KNGQYVGFDIDLAQAVSEKL---GIKVHFQPIDWDMKETELQNGTIDAIWNGY 107 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTT 155 T R + I Y Q I+ KK + I SVS + + QAG++ Sbjct: 108 SATDERREKVAFT---IPYMQNQQVIVSKKSQNIQSVSDMKDKVLGAQAGSS 156 >gi|251788345|ref|YP_003003066.1| Prephenate dehydratase [Dickeya zeae Ech1591] gi|247536966|gb|ACT05587.1| Prephenate dehydratase [Dickeya zeae Ech1591] Length = 255 Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust. Identities = 38/165 (23%), Positives = 72/165 (43%), Gaps = 9/165 (5%) Query: 12 LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI 71 +++L + AS L +++RG LK + ++A+ D++G D+ R+L+ ++ Sbjct: 8 MLLLGLAGSAGAASHLDQVQERGVLKVCTTGDYKPYTSLRADSDYEGIDIAMARSLAKSL 67 Query: 72 FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131 K++++ + K QS Q DI TL R+ F DG+ ++ Sbjct: 68 ---GVKVEWVKTSWKTLMPDFQSGQCDIAMGGISVTLERQKK--AVFSNTLDVDGKIPLV 122 Query: 132 H--KKKGISSVSQLSGASICV--QAGTTTELTLADYFKAHNMKYH 172 K +V Q++ S+ V AG T E + Y ++ H Sbjct: 123 RCDDKDKYQTVEQINQPSVRVIEPAGGTNEAFVHAYLPKASLALH 167 >gi|261822382|ref|YP_003260488.1| glutamate and aspartate transporter subunit [Pectobacterium wasabiae WPP163] gi|261606395|gb|ACX88881.1| extracellular solute-binding protein family 3 [Pectobacterium wasabiae WPP163] Length = 298 Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 71/173 (41%), Gaps = 10/173 (5%) Query: 10 LCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 L LI+L + + A L +K G + G V F+ G+ + Sbjct: 8 LSLILLGTAASAAQAEDLAGTLKKVKDNGVIVIGHRESSVPFSYYDNTQKVVGYSQAYSD 67 Query: 66 ALSSAI---FDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + AI D P+ +++ LP+ ++ R LQ+ D+ +T L R+ AF Sbjct: 68 KIVDAIKKKLDAPNLQVKLLPITSQNRIPLLQNGTFDLECGSTTNNLERQKQA--AFSNT 125 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + G + K G+ L+G ++ V +GTT+E+ L + +K I Sbjct: 126 IFVVGTRLLTKKDSGVKDFPDLAGKTVVVTSGTTSEVLLNKLNEEKQLKMRII 178 >gi|222102916|ref|YP_002539955.1| ABC transporter substrate binding protein (amino acid) [Agrobacterium vitis S4] gi|221739517|gb|ACM40250.1| ABC transporter substrate binding protein (amino acid) [Agrobacterium vitis S4] Length = 279 Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust. Identities = 31/135 (22%), Positives = 59/135 (43%), Gaps = 6/135 (4%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L DI L+C + FA + GFDVD C A+++ + K + P++ Sbjct: 27 LADIMAAKTLRCATFADVPPFASPDPKTREMAGFDVDLCNAIAAKLG---VKAEIKPVSV 83 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 + R ++ ++DI N +TL R + + F Y + I+ + + SG Sbjct: 84 EARVPEVKLGRVDITVANLAYTLSR--AEQIQFSDPYYLAKEMLIVPADTAGKTKADFSG 141 Query: 146 ASICVQAGTTTELTL 160 + G+T+E+++ Sbjct: 142 KRLASTKGSTSEMSI 156 >gi|322833889|ref|YP_004213916.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602] gi|321169090|gb|ADW74789.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602] Length = 298 Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust. Identities = 52/253 (20%), Positives = 98/253 (38%), Gaps = 9/253 (3%) Query: 10 LCLIILFFTSFSTNASILGDIKK---RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 + L + +SF+ + G +KK G + G V F+ G+ D+ A Sbjct: 10 VLLASVTVSSFAHAEELTGTLKKIKDNGVIVVGHRESSVPFSYYNNEQKVVGYSQDYSDA 69 Query: 67 LSSAI---FDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + A+ + P +++ +P+ ++ R LQ+ D +T L R+ AF Sbjct: 70 IVDAVKKKLNLPDLQVKMMPITSQNRIPLLQNGTYDFECGSTTNNLERQQQA--AFSDTI 127 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 + G ++ K I + L G ++ V +GTT+E+ L + + I + + Sbjct: 128 FVIGTRLLVKKGSEIKDFTDLKGKTVVVTSGTTSEVLLNKLNEEKKLDLRIISAKDHGDS 187 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 R A+ D + L + +P I+ SK + + D E+ +V Sbjct: 188 FRTLETGRAVAFMMDDALLAGERAKAKKPDNWEIVGTPQSKEAYGCMMRKDDAEFKKLVD 247 Query: 243 WTHYAMVTAEELG 255 T T+ E G Sbjct: 248 DTIVQAQTSGEAG 260 >gi|290969115|ref|ZP_06560643.1| putative arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Megasphaera genomosp. type_1 str. 28L] gi|290780835|gb|EFD93435.1| putative arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Megasphaera genomosp. type_1 str. 28L] Length = 259 Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 6/107 (5%) Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 E N ++KGFD+DF +A+ + K++ + AL+S QID+++ D T Sbjct: 49 EFADNDNFKGFDIDFAQAICDKM---GVKLEIKNMGFDALIPALKSGQIDMIASGMDATP 105 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGT 154 R S +AF + DG ++ K I L+G ++ Q GT Sbjct: 106 ER--SKQVAFTKPYFHDGYVVVVRKDNTAIQGFESLAGKTVGSQVGT 150 >gi|320183197|gb|EFW58055.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtI [Shigella flexneri CDC 796-83] Length = 243 Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust. Identities = 48/203 (23%), Positives = 82/203 (40%), Gaps = 34/203 (16%) Query: 47 FAEVKANGDWKGFDVDFCRALSSAI-----FDDPSKIQYLPLNAKERFLALQSKQIDILS 101 F + AN GFDVD +AL I F + + +P +L+ ++++ + Sbjct: 34 FESIYANNQIVGFDVDLAQALCKEIDATCTFSNQAFDSLIP--------SLKFRRVEAVM 85 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 D T RE + L P Y+D + ++ +SV QL G + VQ GTT + + Sbjct: 86 AGMDITPEREKQV-LFTTP--YYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFI- 141 Query: 162 DYFKAHNMKYHP----IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 M HP + ++ + + R D GD + + + D P + Sbjct: 142 -------MDKHPEITTVPYDSYQNAKLDLQNGRIDGVFGDTAVV--TEWLKDNPKLAAVG 192 Query: 218 PDIISK----SPLAPAIIQGDTE 236 + K + L A+ QG+TE Sbjct: 193 DKVTDKDYFGTGLGIAVRQGNTE 215 >gi|296103387|ref|YP_003613533.1| glutamate/aspartate transport system substrate-binding protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057846|gb|ADF62584.1| glutamate/aspartate transport system substrate-binding protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 316 Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust. Identities = 48/233 (20%), Positives = 89/233 (38%), Gaps = 6/233 (2%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQY 80 S L I K G + G V F+ G+ D+ A+ A+ + P +++ Sbjct: 45 STLDKIAKNGVIVVGHRESSVPFSYYDNTQKVVGYSQDYSNAIVEAVKKKLNKPDLQVKL 104 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +P+ ++ R LQ+ D +T L R+ AF + G + K I Sbjct: 105 IPITSQNRIPLLQNGTFDFECGSTTNNLERQKQA--AFSDTIFVVGTRLLTKKGGDIKDF 162 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + L G ++ V +GTT+E+ L M I + + + R A+ D + Sbjct: 163 ADLKGKAVVVTSGTTSEVLLHKLNDEKKMDMRIISAKDHGDSFRTLESGRAVAFMMDDAL 222 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 L + +P I+ SK + + D ++ ++ T + T+ E Sbjct: 223 LAGERAKAKKPDNWDIVGTAQSKEAYGCMLRKDDPQFKKLIDDTIAQVQTSGE 275 >gi|226357683|ref|YP_002787422.1| amino acid ABC transporter, periplasmic component [Deinococcus deserti VCD115] gi|226319925|gb|ACO47918.1| putative amino acid ABC transporter, periplasmic component [Deinococcus deserti VCD115] Length = 254 Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust. Identities = 57/245 (23%), Positives = 108/245 (44%), Gaps = 30/245 (12%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 +S+L + L S + A L DIK G LK + F +K G KGF+VD Sbjct: 5 ISLLAGLALMVGS-AAQARTLSDIKASGVLKVATSADFEPFNYMK-GGVAKGFEVDLAEQ 62 Query: 67 LSSAIFDDPSKIQYL--PLNAKERFLALQSKQIDIL--SRNTDWTLLREISLGLAFRPIT 122 ++ + +I+++ P + + + + K+ID++ S + T + + F Sbjct: 63 VARQM---GLRIEWVVRPFDGLLKEVNDRPKEIDVVIASHAINSTRAKTVE----FASPH 115 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y G G I+ +K G + L+G + +AG+T YF ++ P F++ ++ Sbjct: 116 YCTG-GVILTRKGGPLTTKALAGKKLGAEAGST-------YF--SFLRKLP--FDKSVQV 163 Query: 183 DAAYRAHRCDAYTGDISALY-----ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + A TG ++A+ A++ P ++L + + K +A A +G+TE Sbjct: 164 YNSSLAVTTAVATGQVAAIVTDRFAAIEAQKTFPKAGLVLGETLWKEQIAMAFAKGNTEL 223 Query: 238 YNIVS 242 V+ Sbjct: 224 KTAVN 228 >gi|229591447|ref|YP_002873566.1| putative ABC transporter extracellular solute-binding protein [Pseudomonas fluorescens SBW25] gi|229363313|emb|CAY50429.1| putative ABC transport system, extracellular solute-binding protein [Pseudomonas fluorescens SBW25] Length = 277 Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust. Identities = 46/207 (22%), Positives = 86/207 (41%), Gaps = 18/207 (8%) Query: 23 NASILGDIKKRGFLKCGINTGLVGF-AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 A L DI + L CG+ + F A + G DVD C+AL+ + ++ Sbjct: 21 QADQLSDIMAKQSLSCGVYADVPPFSAPDPKTRELVGMDVDLCKALAKTMG---VALELK 77 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 PL+ + R ++ ++D++ N +T R + + F Y + ++ S Sbjct: 78 PLSVEARIPEVKMGRVDVIFANLAYTKTR--AEQIQFSDPYYIAKETLVVRAANADQPKS 135 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS-A 200 I G+T+E ++ P+ F ++ +AY A + + G ++ Sbjct: 136 FFKDKRISSTKGSTSEQSI------RLAGATPVTF---QDTGSAYMALQQNKVVGLVTNT 186 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLA 227 + ALKL N + V L ++K P+A Sbjct: 187 MTALKLVNQAKAGGVEL--ALAKEPMA 211 >gi|294791037|ref|ZP_06756195.1| glutamate-binding protein [Scardovia inopinata F0304] gi|294458934|gb|EFG27287.1| glutamate-binding protein [Scardovia inopinata F0304] Length = 291 Score = 40.4 bits (93), Expect = 0.44, Method: Compositional matrix adjust. Identities = 36/163 (22%), Positives = 71/163 (43%), Gaps = 6/163 (3%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + + IL +I + + S +A G + ++ GI G K NG + GFDVD Sbjct: 18 RSVLIKILAVIAVLASVASVSA--CGSTQSGHVIRIGIKFDQPGVG-YKKNGTYSGFDVD 74 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 R ++ + +I++ +K+R LQ+ +D++ + T R+ + ++F Sbjct: 75 VARYIAHKLGYKDYEIEWTEAPSKQRETMLQNGDVDMILASYSITDDRKKT--VSFAGPY 132 Query: 123 YFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYF 164 GQ ++ K I L+G +C G+T+ + + Sbjct: 133 LVAGQDLLIRKSNTSIKGPDDLNGKRLCSVTGSTSATVVKQKY 175 >gi|78066165|ref|YP_368934.1| ABC polar amino acid transporter, periplasmic ligand binding protein [Burkholderia sp. 383] gi|77966910|gb|ABB08290.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia sp. 383] Length = 264 Score = 40.4 bits (93), Expect = 0.44, Method: Compositional matrix adjust. Identities = 39/174 (22%), Positives = 72/174 (41%), Gaps = 12/174 (6%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 +L +K+RG L+ G+ F G+ GFDVD +A+++ + K +++ Sbjct: 29 LLDQVKQRGTLRVGLEGTFPPFNSKNPQGELVGFDVDIAKAVAAKLG---VKAEFVTTEW 85 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQL 143 LQ+ + D+++ T R+ +L F P + I + S+ L Sbjct: 86 SGIIAGLQAGKFDVIANQVGITDKRKETLD--FSPAYTYSSAQLIQRNDDTRQFKSLEDL 143 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 G + V GT + +A ++K +P E + ++ A R DA D Sbjct: 144 KGKKLGVALGTNY-MDMAKSVPGIDVKTYPGAPEYLRDL----AAGRLDAALND 192 >gi|304395814|ref|ZP_07377697.1| cationic amino acid ABC transporter, periplasmic binding protein [Pantoea sp. aB] gi|304357108|gb|EFM21472.1| cationic amino acid ABC transporter, periplasmic binding protein [Pantoea sp. aB] Length = 248 Score = 40.4 bits (93), Expect = 0.45, Method: Compositional matrix adjust. Identities = 51/197 (25%), Positives = 85/197 (43%), Gaps = 30/197 (15%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 VS+ L + F S S+ A+ D K L +T V F E K + GFDVD A Sbjct: 7 VSVAALALAF--SLSSTAA---DKK----LVVATDTAFVPF-EFKQGDKYVGFDVDLWDA 56 Query: 67 LSSAIFDDPSKIQYL--PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 ++ + K+ Y P++ ALQ++ +D+ T+ E + F Y Sbjct: 57 IAKEL-----KLDYTLKPMDFSGIIPALQTRNVDLALAGI--TITEERKKAIEFSDGYYK 109 Query: 125 DG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 G Q + + + I +S L+G + V++GT + + K+ +++ P ID Sbjct: 110 SGLQVMVRNNENDIKGISDLNGKVVAVKSGTGSVEYAKAHIKSKDLRQFP-------NID 162 Query: 184 AAYR---AHRCDAYTGD 197 +AY +R DA D Sbjct: 163 SAYMELGTNRADAVLHD 179 >gi|300692905|ref|YP_003753900.1| glutamate/aspartate transport protein; ABC superfamily, periplasmic binding component [Ralstonia solanacearum PSI07] gi|299079965|emb|CBJ52642.1| glutamate/aspartate transport protein; ABC superfamily, periplasmic binding component [Ralstonia solanacearum PSI07] Length = 301 Score = 40.4 bits (93), Expect = 0.45, Method: Compositional matrix adjust. Identities = 38/194 (19%), Positives = 73/194 (37%), Gaps = 6/194 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQYLP 82 L I+ + G+ + F+ + GF D C + + K +Q +P Sbjct: 32 LKKIQDSNTILIGVREASIPFSYRDSKNQIIGFSADLCARVIDVVKQKVGKPDLQVQQIP 91 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R +Q+ +D+ T T L+ AF + + + G+ Sbjct: 92 VTSQNRTALVQNGSVDLECGVT--THLKSREQQTAFSTTFFIAATRLLTNVNSGVKDFPD 149 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+G S+ AGTT+E L M + I + E ++ R A+ D L Sbjct: 150 LAGKSVITNAGTTSERILRKMNDEKKMNMNVISGKDYGESFLTLQSGRVQAFMMDDVLLA 209 Query: 203 ALKLTNDRPSEHVI 216 + +P++ V+ Sbjct: 210 GARTLAQKPADWVV 223 >gi|304397041|ref|ZP_07378920.1| cationic amino acid ABC transporter, periplasmic binding protein [Pantoea sp. aB] gi|304355190|gb|EFM19558.1| cationic amino acid ABC transporter, periplasmic binding protein [Pantoea sp. aB] Length = 243 Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust. Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 16/121 (13%) Query: 47 FAEVKANGDWKGFDVDFCRALSSAI-----FDDPSKIQYLPLNAKERFLALQSKQIDILS 101 F V A+ +GFDVD AL I F + + +P +L+ ++ D + Sbjct: 34 FEYVDADNKIQGFDVDLANALCKEIDATCTFTNQAFDSLIP--------SLKFRRFDAVM 85 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 D T RE + L +P Y+D + +K ++SV L G + VQ GTT + L Sbjct: 86 AGMDITPDREKQV-LFTKP--YYDNSALFVAQKGKVASVEALKGKRVGVQNGTTHQKYLT 142 Query: 162 D 162 D Sbjct: 143 D 143 >gi|300310886|ref|YP_003774978.1| amino acid ABC transporter periplasmic protein [Herbaspirillum seropedicae SmR1] gi|300073671|gb|ADJ63070.1| ABC-type amino acid transport system, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 265 Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust. Identities = 60/248 (24%), Positives = 106/248 (42%), Gaps = 27/248 (10%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 A L DI+K G +K G+ + V ++ +G D+D R ++ + K + +P+ Sbjct: 24 ADTLADIQKAGVVKIGVPQDFAPYGSVTSDLQLQGLDIDVARLVAKGMG---VKAELVPV 80 Query: 84 NAKERFLALQSKQIDI----LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 R LQ+ +ID+ L +N + + + S G A ++ F + K ++ Sbjct: 81 PISSRMAFLQTHKIDLIISTLGKNAEREKVIDFSQGYA-----PYNNSVFGVAAIK-VAG 134 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE---IDAAYRAHRCDAY-T 195 + L+ ++ V T +L L D V +R E+ + AAY + + T Sbjct: 135 PADLANQTVGVARSTFEDLMLTDSVPKST------VIKRYEDNNGLIAAYVSGQVQLVGT 188 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL- 254 GD A YA L P+ +L II+ S + +G+ V+ A + EL Sbjct: 189 GDFVA-YA--LAEKTPANKPLLKYIINVSTCYVGMNKGEPALMAKVNEALTASKKSGELN 245 Query: 255 GITQKNIN 262 GI +K +N Sbjct: 246 GIVKKWLN 253 >gi|172036285|ref|YP_001802786.1| solute-binding family protein 3 precursor [Cyanothece sp. ATCC 51142] gi|171697739|gb|ACB50720.1| putative extracellular solute-binding protein, family 3 precursor [Cyanothece sp. ATCC 51142] Length = 301 Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust. Identities = 50/204 (24%), Positives = 81/204 (39%), Gaps = 16/204 (7%) Query: 5 FFVSILCLIILFF---TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 F++SI+ L + F S + ++L I K G L+ GI V F NG+ +G + Sbjct: 6 FYLSIINLFLFFIYGSLSHAQELTVLEKIDKTGLLEVGIREDAVPFGYRDINGNLEGLCL 65 Query: 62 DFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDI-LSRNTDWTLLREI-SLG 115 DF L + +K I+ RF + +D+ NT +RE+ Sbjct: 66 DFIAILREKLKQKLNKKVIAIKLYKSTLYNRFELASDRIVDLECGPNT----IREVPEYQ 121 Query: 116 LAFRPITYFDGQGFI--MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F + G + + + K I+ L I V TT E +A+ + N+ Sbjct: 122 VQFSQPFFLTGTQLLVSIDQAKTINPDGSLENVDIGVLRNTTNEQLIAEKYPLANLVKFE 181 Query: 174 IVFERVEEIDAAYRAHRCDAYTGD 197 V R I A R + DA+ D Sbjct: 182 GVTGRSRGIQ-ALRGDKIDAFASD 204 >gi|146310840|ref|YP_001175914.1| glutamate and aspartate transporter subunit [Enterobacter sp. 638] gi|145317716|gb|ABP59863.1| L-glutamate-binding protein / L-aspartate-binding protein [Enterobacter sp. 638] Length = 301 Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust. Identities = 48/233 (20%), Positives = 89/233 (38%), Gaps = 6/233 (2%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQY 80 S L I K G + G V F+ G+ D+ A+ A+ + P +++ Sbjct: 30 STLDKIAKNGVIVVGHRESSVPFSYYDNTQKVVGYSQDYSNAIVEAVKKKLNKPDLEVKL 89 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +P+ ++ R LQ+ D +T L R+ AF + G + K I Sbjct: 90 IPITSQNRIPLLQNGTFDFECGSTTNNLERQKQA--AFSDTIFVVGTRLLTKKGGDIKDF 147 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + L G ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 148 ADLKGKAVVVTSGTTSEVLLHKLNEEKKMDMRIISAKDHGDSFRTLESGRAVAFMMDDAL 207 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 L + +P I+ SK + + D ++ ++ T T+ E Sbjct: 208 LAGERAKAKKPDNWEIVGTAQSKEAYGCMLRKDDADFKKLIDDTIAKTQTSGE 260 >gi|148550100|ref|YP_001270202.1| extracellular solute-binding protein [Pseudomonas putida F1] gi|148514158|gb|ABQ81018.1| extracellular solute-binding protein, family 3 [Pseudomonas putida F1] Length = 266 Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust. Identities = 52/246 (21%), Positives = 100/246 (40%), Gaps = 14/246 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + +L + + A + D KRG L+ G++ + F G+ GF+ Sbjct: 1 MIKKYLSRLLVGVTALVAVTAAQAGAIDDAVKRGTLRVGMDPTYMPFQMTNKRGEIIGFE 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A++ ++ K + + AL + + D++ + TL +E +L L F Sbjct: 61 VDILKAMAKSM---GVKFEAVSTAYDGIIPALLTDKFDMIG--SGMTLTQERNLRLNFSE 115 Query: 121 ITYFDGQGFIMHKKKG--ISSVSQLSGAS--ICVQAGTTTELTLADYFKAHNMKYHPIVF 176 GQ ++ K+ I S L+ + + GTT E+ KYH Sbjct: 116 PFIVVGQTLLIRKELAGEIKSYKDLNNEKYRLTSKLGTTGEMVSKKLI--SKAKYHGYDN 173 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E+ +D + DA+ D + + + + + L + + PLA + +GD + Sbjct: 174 EQEAVMDVV--NGKADAFVYD-APYNVVAVEKAGAGKLLFLEEPFTYEPLAFGLKKGDYD 230 Query: 237 WYNIVS 242 N ++ Sbjct: 231 SINFIN 236 >gi|269124459|ref|YP_003297829.1| extracellular solute-binding protein family 3 protein [Thermomonospora curvata DSM 43183] gi|268309417|gb|ACY95791.1| extracellular solute-binding protein family 3 [Thermomonospora curvata DSM 43183] Length = 279 Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust. Identities = 31/135 (22%), Positives = 59/135 (43%), Gaps = 3/135 (2%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 +A G I + L+ G+ G + +G ++GFDVD R ++ + I ++ Sbjct: 28 DAGGAGSILDKSTLRIGVKADQPGLGLKRPDGTFEGFDVDVARYVAGRLGFAEEDITFVE 87 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVS 141 + R ALQ +++D++ T R+ + F Y Q ++ G + +V Sbjct: 88 TPSSVREQALQERRVDMIVATYSITAGRKTK--VTFAGPYYVAHQDTLVRAGDGAVRNVR 145 Query: 142 QLSGASICVQAGTTT 156 LSG +C G+ + Sbjct: 146 DLSGRRLCKVTGSNS 160 >gi|161520627|ref|YP_001584054.1| extracellular solute-binding protein [Burkholderia multivorans ATCC 17616] gi|189353187|ref|YP_001948814.1| ABC-type polar amino acid transport system substrate-binding protein [Burkholderia multivorans ATCC 17616] gi|160344677|gb|ABX17762.1| extracellular solute-binding protein family 3 [Burkholderia multivorans ATCC 17616] gi|189337209|dbj|BAG46278.1| ABC-type polar amino acid transport system substrate-binding protein [Burkholderia multivorans ATCC 17616] Length = 298 Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust. Identities = 51/235 (21%), Positives = 87/235 (37%), Gaps = 14/235 (5%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD-------PS-KI 78 L IK G + GI V F+ D + ++ + R +++ I D P + Sbjct: 29 LKKIKDTGVVSLGIRESSVPFSY----SDNQQKNIGYSRDIAARIIDQLKTDLNLPGLTV 84 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + +P+ ++ R LQ+ ID +T TL R+ AF + G F K G+ Sbjct: 85 KEIPITSQNRIPLLQNGTIDFECGSTTNTLERQKQA--AFSNSIFLYGIRFSTRKDSGVK 142 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 L+G ++ AGT+ E L + M I + E R A+ D Sbjct: 143 DFPDLAGKTVATTAGTSDERLLRKLNEEKGMNMTIISAKDHAEAFMNVTTGRAVAFVMDE 202 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 LY + P + + + A + + D + +V M T+ E Sbjct: 203 PLLYGEIAKDRNPGAYTVTGTPLMHENYACMMRKDDPAFKRVVDGVIAKMQTSGE 257 >gi|300705161|ref|YP_003746764.1| glutamate/aspartate ABC transporter periplasmic-binding protein [Ralstonia solanacearum CFBP2957] gi|299072825|emb|CBJ44181.1| glutamate/aspartate transport protein; ABC superfamily, periplasmic binding component [Ralstonia solanacearum CFBP2957] Length = 298 Score = 40.0 bits (92), Expect = 0.46, Method: Compositional matrix adjust. Identities = 44/227 (19%), Positives = 88/227 (38%), Gaps = 6/227 (2%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS----KIQYLP 82 L IK G + G+ + F+ G+ D + A+ D +++ +P Sbjct: 29 LKKIKDTGTITLGVRDSSIPFSYNVGGVRTIGYSYDVATKIVEAVKDQLKLKDLQVKEIP 88 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R LQ+ ID+ +T L R+ +F + G ++ K GI + Sbjct: 89 VTSQNRITLLQNGTIDLECGSTTNNLERQKQA--SFTDTIFIIGTRIMVKKDSGIKDWAD 146 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G ++ AGTT+E L + + I + + + R A+ D + LY Sbjct: 147 LKGKNVVTTAGTTSERLLRKMNDDKQLGMNIISTKDHGQSFLTLESGRAVAFMMDDALLY 206 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 + P++ V++ S+ + + D + + T M+ Sbjct: 207 GERAKAKNPADWVVVAKPQSREAYGCMVRKDDAPFKALADKTIAGMM 253 >gi|170733526|ref|YP_001765473.1| extracellular solute-binding protein [Burkholderia cenocepacia MC0-3] gi|169816768|gb|ACA91351.1| extracellular solute-binding protein family 3 [Burkholderia cenocepacia MC0-3] Length = 306 Score = 40.0 bits (92), Expect = 0.46, Method: Compositional matrix adjust. Identities = 39/191 (20%), Positives = 73/191 (38%), Gaps = 6/191 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQYLP 82 L +++ + G V F+ V A G GF D C + +A+ K ++++P Sbjct: 37 LDKVRQSNLISIGHRETSVPFSYVDAGGKVIGFSQDLCDRVIAAVKARTGKPDLQVRFIP 96 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R +Q+ +D+ T R +AF + + GI Sbjct: 97 VTSQNRIPLVQNGTVDLECGVTTNLAARHAQ--VAFSTTFFVATTRLLTRTTSGIRDFPD 154 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+G ++ GTT+E L + M I + E + R AY D L Sbjct: 155 LAGKTVVTNQGTTSERLLRKMNEEKKMNMQIISAKDYGEGRLTLESGRAAAYMMDDVLLA 214 Query: 203 ALKLTNDRPSE 213 ++ +P++ Sbjct: 215 GVRQLAAKPAD 225 >gi|167614881|ref|ZP_02383516.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia thailandensis Bt4] Length = 299 Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust. Identities = 31/139 (22%), Positives = 59/139 (42%), Gaps = 2/139 (1%) Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++ +P+ ++ R +Q+ +D+ +T T +E + ++F + G I K G+ Sbjct: 85 VREIPITSQNRIPLVQNGTVDLECGSTTHT--KERANQVSFSNSIFQYGMRLIAKKSSGV 142 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 L+G ++ AGTT E L + M I + + ++ R A+ D Sbjct: 143 KDFPDLAGKTVATTAGTTEERLLRQWNAEKGMSMQIISAKDHADAFLNVKSGRAVAFFMD 202 Query: 198 ISALYALKLTNDRPSEHVI 216 LY K P ++VI Sbjct: 203 EPLLYGAKAKEANPGDYVI 221 >gi|317402646|gb|EFV83204.1| solute-binding protein [Achromobacter xylosoxidans C54] Length = 275 Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust. Identities = 49/224 (21%), Positives = 93/224 (41%), Gaps = 22/224 (9%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWK-----GFDVDFCRALSSAIFDDPSKIQYL 81 L DIK RG CG +G AE + D K G++VD C+A++ ++ P +++ + Sbjct: 27 LQDIKARGKFICGT----MGTAEPFSFQDPKTRAIVGYEVDMCQAVADSL-GVPLELKLI 81 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 + A R L + ++D+++ N W+ R + + + + K + + + Sbjct: 82 AVEA--RIPELIAGRVDVVAANLGWSPERAQQIDYSHQHFVSLQ-KVLARESDKDLKAPA 138 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L+G + G+++E + P+ F+ A + + + G S L Sbjct: 139 DLAGKRVSAVRGSSSEQGARKFIP----NVEPVTFKDPSGAFLALQQGKVSGFVG--SEL 192 Query: 202 YALKLTNDRPSEHV---ILPDIISKSPLAPAIIQGDTEWYNIVS 242 +KL S V IL + P + +GDT N V+ Sbjct: 193 MLVKLKQQAASSAVPAKILEPALFVEPWGMGVRRGDTAMLNQVN 236 >gi|302524588|ref|ZP_07276930.1| glutamate-binding protein [Streptomyces sp. AA4] gi|302433483|gb|EFL05299.1| glutamate-binding protein [Streptomyces sp. AA4] Length = 276 Score = 40.0 bits (92), Expect = 0.48, Method: Compositional matrix adjust. Identities = 57/251 (22%), Positives = 96/251 (38%), Gaps = 14/251 (5%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRG----FLKCGINTGLVGFAEVKANGDWKGFDV 61 V+ L L++ + S+ S + R L GI G ++ +G GFDV Sbjct: 6 LVAALFLLVSCVSCGSSTVSKDDPLPTRARDGNHLTIGIRFDAPGLSQRTVDGRLAGFDV 65 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D ++ + +P +I + R L S +D++ T R+ + A Sbjct: 66 DVATFVARELGVEPDRITWHETTPARRETDLTSGAVDLVVATYSITDKRKQRVSFAG--- 122 Query: 122 TYF-DGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 YF GQ ++ I+ L+G +C G+T + D F A +K + + R Sbjct: 123 PYFVTGQDLLVRLTSPDITGPESLNGKRLCSVTGSTPAQMVKDKF-AQMVKL--VEYPRY 179 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + A A++ DA T D L N P ++ S + +GDTE + Sbjct: 180 PDCVTALLANQVDAVTTDAVILAGYAAQN--PELLKVVGRPFSAERYGIGLRKGDTEGQH 237 Query: 240 IVSWTHYAMVT 250 V MV+ Sbjct: 238 AVDDAIRKMVS 248 >gi|16262719|ref|NP_435512.1| ABC transporter periplasmic substrate-binding protein [Sinorhizobium meliloti 1021] gi|14523345|gb|AAK64924.1| ABC transporter, periplasmic solute-binding protein [Sinorhizobium meliloti 1021] Length = 265 Score = 40.0 bits (92), Expect = 0.48, Method: Compositional matrix adjust. Identities = 34/141 (24%), Positives = 64/141 (45%), Gaps = 5/141 (3%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + +AS L DI R + G++ + F G DVD + L+ D +++ Sbjct: 24 TASASSLDDIIARKKVMIGVDLSVPPFGITNEEMQPDGLDVDVAKLLAK---DLGVELEL 80 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +P+ + R +LQ+ ++D + + + + E +L +AF I K+ I S+ Sbjct: 81 VPVTGQSRIPSLQTGKVDFVVAS--FGIYTERALSVAFSNPYGGHRSIIIAPKEATIKSL 138 Query: 141 SQLSGASICVQAGTTTELTLA 161 + L+G + V GT E L+ Sbjct: 139 ADLAGKRVGVPRGTAHEKILS 159 >gi|330815541|ref|YP_004359246.1| Glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia gladioli BSR3] gi|327367934|gb|AEA59290.1| Glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia gladioli BSR3] Length = 297 Score = 40.0 bits (92), Expect = 0.48, Method: Compositional matrix adjust. Identities = 44/203 (21%), Positives = 78/203 (38%), Gaps = 6/203 (2%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDP 75 + + L IK G + G + F+ N G+ DF + A+ + P Sbjct: 20 AMAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQKVIGYARDFQMKVVDAVKKKLNLP 79 Query: 76 S-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 + +++ +P+ ++ R +Q+ +DI +T L R+ AF + G + K Sbjct: 80 NLQVKDIPVTSQNRIPLVQNGTVDIECGSTTNNLERQKQA--AFSTTYFVIGTRLMTSKD 137 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 GI + L G ++ AGTT+E L M I + E R A+ Sbjct: 138 SGIKDFADLKGKTVVTTAGTTSERLLRAMNNDKQMGMSIISAKDHGESFQTLETGRAVAF 197 Query: 195 TGDISALYALKLTNDRPSEHVIL 217 D + L + +P VI+ Sbjct: 198 MMDDALLAGERAKAKKPDNWVIV 220 >gi|296454584|ref|YP_003661727.1| family 3 extracellular solute-binding protein [Bifidobacterium longum subsp. longum JDM301] gi|296184015|gb|ADH00897.1| extracellular solute-binding protein, family 3 [Bifidobacterium longum subsp. longum JDM301] Length = 279 Score = 40.0 bits (92), Expect = 0.48, Method: Compositional matrix adjust. Identities = 33/168 (19%), Positives = 74/168 (44%), Gaps = 5/168 (2%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILG-DIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + F +C +I + + S+ + G ++ GI G K +G + GFD Sbjct: 3 FTNTFKRKVCRVIAALAAVACTMSLAACGADETGKIRIGIKFDQPGLG-FKKSGTYVGFD 61 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + ++ + +I + +K+R +Q+ +D++ +++ E ++F Sbjct: 62 VDVAKYIAKKLGYSEDQIIWKEAPSKQREAMIQNGDVDMILAT--YSITDERKKAVSFAG 119 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 + GQ ++ K I+ L+G +C G+T+ T+ + F + Sbjct: 120 PYFVAGQDLLVRKDDNSINGPEDLNGKRLCSVTGSTSAATVKEKFASE 167 >gi|302391066|ref|YP_003826886.1| extracellular solute-binding protein family 3 [Acetohalobium arabaticum DSM 5501] gi|302203143|gb|ADL11821.1| extracellular solute-binding protein family 3 [Acetohalobium arabaticum DSM 5501] Length = 258 Score = 40.0 bits (92), Expect = 0.49, Method: Compositional matrix adjust. Identities = 53/225 (23%), Positives = 93/225 (41%), Gaps = 33/225 (14%) Query: 5 FFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 F V++L L ++ T + +IK+ G L G + F G+ GFDV Sbjct: 8 FLVTLLGLALVVGVVGCTGTEEKTTFNEIKEEGKLVVGCSADYKPFEYPNEEGEIVGFDV 67 Query: 62 DFCRALSSAI-----FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 + A+ + F D + +P +L+SK+ D++ T R ++ Sbjct: 68 ELMEAVGEELGLEVEFKDTAFDGLIP--------SLKSKKFDVIVSAMTITDKRAEAVDF 119 Query: 117 AFRPITYFDGQGFIMHKKKG---ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + P YF+ G ++ K+G I L+G + VQ GTT +L ++ +K Sbjct: 120 S-EP--YFNA-GQVIAVKEGSTDIQGPEDLAGKVVGVQLGTTGDLEASEMEDIKQVKR-- 173 Query: 174 IVFERVEEIDAAYRAHRCDAYTGD--ISALYALKLTNDRPSEHVI 216 +E++ + R R DA D ++A Y + D P +I Sbjct: 174 --YEKITQAFIELRNGRIDAVVNDLPVTAAYIM----DNPDVEII 212 >gi|295838853|ref|ZP_06825786.1| amino acid ABC transporter, amino acid-binding protein [Streptomyces sp. SPB74] gi|295827222|gb|EDY42336.2| amino acid ABC transporter, amino acid-binding protein [Streptomyces sp. SPB74] Length = 347 Score = 40.0 bits (92), Expect = 0.49, Method: Compositional matrix adjust. Identities = 36/166 (21%), Positives = 72/166 (43%), Gaps = 16/166 (9%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQ 79 + + + + IK+RG L G++ +A G + +GFD+D R ++ I K++ Sbjct: 64 AKDGAAIAAIKERGELLVGVDQNSYRWAYRGTYGSEPEGFDIDLARRVAKEILGAADKVR 123 Query: 80 YLPLNAKERFLALQSKQID----ILSRNTDWTL----------LREISLGLAFRPITYFD 125 + ++ +R AL + D + R+ ++ R IS +AF + Sbjct: 124 FKTVSTADRGPALGRDEKDKGKPLAERDAKASVDMIISTMSITCRHISNDIAFSTPYFET 183 Query: 126 GQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMK 170 Q ++ + + L G+ +C G+T E LA + A+ +K Sbjct: 184 RQTLVVPRDSPVKGFGPTLGGSRLCAATGSTAEAFLARHGGAYGLK 229 >gi|152985201|ref|YP_001351134.1| putative ABC transporter binding protein subunit [Pseudomonas aeruginosa PA7] gi|150960359|gb|ABR82384.1| probable binding protein component of ABC transporter [Pseudomonas aeruginosa PA7] Length = 266 Score = 40.0 bits (92), Expect = 0.49, Method: Compositional matrix adjust. Identities = 55/238 (23%), Positives = 100/238 (42%), Gaps = 14/238 (5%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 +L + L + + A + D KRG L+ G++ + F G GF+VD +A++ Sbjct: 9 VLGVCALLGVASAQAAGAVEDAVKRGTLRVGMDPTYMPFEMTNKRGQIIGFEVDLLKAMA 68 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 ++ K++ + + AL + + D++ + TL +E +L L F GQ Sbjct: 69 KSM---GVKLELVSTSYDGIIPALLTGKFDMIG--SGMTLTQERNLRLNFSEPFIVVGQT 123 Query: 129 FIMHK--KKGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K + I S L+ SI + GTT E+ KYH F+ E Sbjct: 124 LLVRKELEGKIKSYKDLNDPQYSITSKIGTTGEIVARKLI--SKAKYHG--FDNEPEAVM 179 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + DA+ D S + ++ + V L + PLA + +GD + N ++ Sbjct: 180 DVVNGKADAFIYD-SPYNVVAVSKFGAGKLVYLDQPFTYEPLAFGLKKGDYDSINFIN 236 >gi|227546749|ref|ZP_03976798.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Bifidobacterium longum subsp. infantis ATCC 55813] gi|227212711|gb|EEI80592.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Bifidobacterium longum subsp. infantis ATCC 55813] Length = 279 Score = 40.0 bits (92), Expect = 0.50, Method: Compositional matrix adjust. Identities = 33/168 (19%), Positives = 74/168 (44%), Gaps = 5/168 (2%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILG-DIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + F +C +I + + S+ + G ++ GI G K +G + GFD Sbjct: 3 FTNTFKRKVCRVIAALAAVACTMSLAACGADETGKIRIGIKFDQPGLG-FKKSGTYVGFD 61 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + ++ + +I + +K+R +Q+ +D++ +++ E ++F Sbjct: 62 VDVAKYIAKKLGYSEDQIIWKEAPSKQREAMIQNGDVDMILAT--YSITDERKKAVSFAG 119 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 + GQ ++ K I+ L+G +C G+T+ T+ + F + Sbjct: 120 PYFVAGQDLLVRKDDNSINGPEDLNGKRLCSVTGSTSAATVKEKFASE 167 >gi|186473522|ref|YP_001860864.1| extracellular solute-binding protein [Burkholderia phymatum STM815] gi|184195854|gb|ACC73818.1| extracellular solute-binding protein family 3 [Burkholderia phymatum STM815] Length = 299 Score = 40.0 bits (92), Expect = 0.50, Method: Compositional matrix adjust. Identities = 42/201 (20%), Positives = 81/201 (40%), Gaps = 14/201 (6%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK------ 77 ++ L I++ G + G+ V F+ D + + + +A++ I D+ K Sbjct: 27 SATLKKIRETGAISLGVRESSVPFSYY----DEQQHVIGYSQAIALKIVDEVKKELNLPD 82 Query: 78 --IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 ++ +P+ ++ R +Q+ IDI +T T R+ + + Y G I+ K+ Sbjct: 83 LKVREIPITSQNRIPLVQNGTIDIECGSTTHTKERDNQVAFSNSFFQY--GVRMIVKKES 140 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 G+ L+ ++ AGT+ E L +M I + E + R A+ Sbjct: 141 GVKDFGDLANKTVVTTAGTSEERLLRQMNAEKSMNMRLISAKDHAESFLNVKTGRAVAFV 200 Query: 196 GDISALYALKLTNDRPSEHVI 216 D LY K E++I Sbjct: 201 MDDPLLYGAKAKEANADEYLI 221 >gi|323937970|gb|EGB34232.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli E1520] Length = 243 Score = 40.0 bits (92), Expect = 0.51, Method: Compositional matrix adjust. Identities = 48/203 (23%), Positives = 82/203 (40%), Gaps = 34/203 (16%) Query: 47 FAEVKANGDWKGFDVDFCRALSSAI-----FDDPSKIQYLPLNAKERFLALQSKQIDILS 101 F + AN GFDVD +AL I F + + +P +L+ ++++ + Sbjct: 34 FESIDANNQIVGFDVDLAQALCKEIDATCTFSNQAFDSLIP--------SLKFRRVEAVM 85 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 D T RE + L P Y+D + ++ +SV QL G + VQ GTT + + Sbjct: 86 AGMDITPEREKQV-LFTTP--YYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFI- 141 Query: 162 DYFKAHNMKYHP----IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 M HP + ++ + + R D GD + + + D P + Sbjct: 142 -------MDKHPEITTVPYDSYQNAKLDLQNGRIDGVFGDTAVV--TEWLKDNPKLAALG 192 Query: 218 PDIISK----SPLAPAIIQGDTE 236 + K + L A+ QG+TE Sbjct: 193 DKVTDKDYFGTGLGIAVRQGNTE 215 >gi|77456472|ref|YP_345977.1| cystine transporter subunit [Pseudomonas fluorescens Pf0-1] gi|77380475|gb|ABA71988.1| Diaminopimelate-binding protein / L-cystine-binding protein [Pseudomonas fluorescens Pf0-1] Length = 266 Score = 40.0 bits (92), Expect = 0.51, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 59/134 (44%), Gaps = 7/134 (5%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L IK +G + G+ F+ V A+G GF+V+ AL+ + +KIQ P Sbjct: 33 LQQIKDKGVINVGLEGTYPPFSFVDADGKLSGFEVELSEALAKKL-GVKAKIQ--PTKWD 89 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG---ISSVSQL 143 AL+SK++D++ + R+ + P T Q ++ K I S + L Sbjct: 90 GILAALESKRLDVVVNQVTISEERKKKYDFS-EPYTVSGIQALVLKDKAAALNIKSAADL 148 Query: 144 SGASICVQAGTTTE 157 SG + V GT E Sbjct: 149 SGKKVGVGLGTNYE 162 >gi|167036063|ref|YP_001671294.1| extracellular solute-binding protein [Pseudomonas putida GB-1] gi|166862551|gb|ABZ00959.1| extracellular solute-binding protein family 3 [Pseudomonas putida GB-1] Length = 266 Score = 40.0 bits (92), Expect = 0.52, Method: Compositional matrix adjust. Identities = 52/246 (21%), Positives = 100/246 (40%), Gaps = 14/246 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + +L + + A + D KRG L+ G++ + F G+ GF+ Sbjct: 1 MIKKYLSRLLVGVTALVAVTAAQAGAIDDAVKRGTLRVGMDPTYMPFQMTNKRGEIIGFE 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A++ ++ K + + AL + + D++ + TL +E +L L F Sbjct: 61 VDILKAMAKSM---GVKFEAVSTAYDGIIPALLTDKFDMIG--SGMTLTQERNLRLNFSE 115 Query: 121 ITYFDGQGFIMHKKKG--ISSVSQLSGAS--ICVQAGTTTELTLADYFKAHNMKYHPIVF 176 GQ ++ K+ I S L+ + + GTT E+ KYH Sbjct: 116 PFIVVGQTLLIRKELAGEIKSYKDLNNEKYRLTSKLGTTGEMVSKKLI--GKAKYHGYDN 173 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E+ +D + DA+ D + + + + + L + + PLA + +GD + Sbjct: 174 EQEAVMDVV--NGKADAFVYD-APYNVVAVEKAGAGKLLFLEEPFTYEPLAFGLKKGDYD 230 Query: 237 WYNIVS 242 N ++ Sbjct: 231 SINFIN 236 >gi|298291224|ref|YP_003693163.1| extracellular solute-binding protein family 3 [Starkeya novella DSM 506] gi|296927735|gb|ADH88544.1| extracellular solute-binding protein family 3 [Starkeya novella DSM 506] Length = 270 Score = 40.0 bits (92), Expect = 0.52, Method: Compositional matrix adjust. Identities = 47/193 (24%), Positives = 79/193 (40%), Gaps = 16/193 (8%) Query: 9 ILCLIILFFTSFSTNASILGD-IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 I L+ F+ A+ D IK+RG L G+ F +G G + D + Sbjct: 6 IALLLAGVLAPFAAQAADGVDAIKQRGTLIVGVKADYKPFGFRDPSGAVVGIEPDLAADV 65 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL-SRNTDWTLLREISLGLAFRPITYFDG 126 + + K++ +P+ + R LQ ++D+L + +D R++ A P Y D Sbjct: 66 AKRLG---VKLELVPVVSSNRIEFLQQGKVDMLIATMSDKPERRKVVQ--AIDPPYYSDF 120 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY--HPIVFERVEEIDA 184 ++ KK G+ S+L G +C +G A Y K KY + F+ E+ Sbjct: 121 VNVLLPKKAGVKDWSELKGKPLCATSG-------AWYNKEIAQKYGVEIVAFDGSEKPLF 173 Query: 185 AYRAHRCDAYTGD 197 A + C Y D Sbjct: 174 ALKQGNCVGYVYD 186 >gi|238064114|ref|ZP_04608823.1| glutamate binding protein [Micromonospora sp. ATCC 39149] gi|237885925|gb|EEP74753.1| glutamate binding protein [Micromonospora sp. ATCC 39149] Length = 281 Score = 40.0 bits (92), Expect = 0.53, Method: Compositional matrix adjust. Identities = 24/106 (22%), Positives = 47/106 (44%), Gaps = 2/106 (1%) Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 +K +G + GFDV+ + ++ + DP+ IQ+ +R ++ +D++ +T+ Sbjct: 54 LKTDGTYVGFDVEIGKIVAKGLGVDPANIQWKDTTVPDRERVIKDGTVDLVVAT--YTIN 111 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 + F Y GQ ++ I L G +C AG+T Sbjct: 112 DARKKEIRFAGPYYVAGQDLLVKANSTIKGPEDLEGKVVCSSAGST 157 >gi|227530176|ref|ZP_03960225.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus vaginalis ATCC 49540] gi|227349851|gb|EEJ40142.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus vaginalis ATCC 49540] Length = 146 Score = 40.0 bits (92), Expect = 0.53, Method: Compositional matrix adjust. Identities = 32/137 (23%), Positives = 63/137 (45%), Gaps = 7/137 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFC 64 V+++ + +L S N +L +K + G+ +T L G ++ G +GF++D Sbjct: 13 VALISITVLSGCSSVANQDVLKVDQKNKQITWGVKADTRLFGLENIRT-GKLEGFEIDLA 71 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 +A++ I K ++P+ + R L++ ID + T RE + +YF Sbjct: 72 KAMTKEILGPNGKAVFVPVTSSTRVPLLKNGNIDTIMATMTITPEREKQVDFTK---SYF 128 Query: 125 D-GQGFIMHKKKGISSV 140 D GQ ++ K I ++ Sbjct: 129 DAGQSLLVKKGSPIKNI 145 >gi|83717385|ref|YP_438424.1| glutamate/aspartate ABC transporter periplasmic glutamate/aspartate-binding protein [Burkholderia thailandensis E264] gi|257141466|ref|ZP_05589728.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia thailandensis E264] gi|83651210|gb|ABC35274.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia thailandensis E264] Length = 299 Score = 40.0 bits (92), Expect = 0.53, Method: Compositional matrix adjust. Identities = 31/139 (22%), Positives = 59/139 (42%), Gaps = 2/139 (1%) Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++ +P+ ++ R +Q+ +D+ +T T +E + ++F + G I K G+ Sbjct: 85 VREIPITSQNRIPLVQNGTVDLECGSTTHT--KERANQVSFSNSIFQYGMRLIAKKSSGV 142 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 L+G ++ AGTT E L + M I + + ++ R A+ D Sbjct: 143 KDFPDLAGKTVATTAGTTEERLLRQWNAEKGMSMQIISAKDHADAFLNVKSGRAVAFFMD 202 Query: 198 ISALYALKLTNDRPSEHVI 216 LY K P ++VI Sbjct: 203 EPLLYGAKAKEANPGDYVI 221 >gi|262047081|ref|ZP_06020040.1| glutamine-binding protein [Lactobacillus crispatus MV-3A-US] gi|312984301|ref|ZP_07791645.1| glutamine-binding protein [Lactobacillus crispatus CTV-05] gi|260572658|gb|EEX29219.1| glutamine-binding protein [Lactobacillus crispatus MV-3A-US] gi|310894319|gb|EFQ43397.1| glutamine-binding protein [Lactobacillus crispatus CTV-05] Length = 272 Score = 40.0 bits (92), Expect = 0.53, Method: Compositional matrix adjust. Identities = 39/196 (19%), Positives = 81/196 (41%), Gaps = 10/196 (5%) Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 +T L G +K G +GF++D +AL+ + +K ++ A R L++ +D + Sbjct: 48 DTRLFGLTNIKT-GHIEGFEIDLAKALTKQMLGKDAKTDFVTTTANTRIPLLKNGNVDAV 106 Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 T+ E + + F + G ++ I +V L G ++ GTT Sbjct: 107 L--ATMTITPERAKQVTFSKPYFPAGSSLLVPNNSKIKNVKDLEGKTVLAVKGTTA---- 160 Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220 D + K + ++ + +A +A++ A T D L + N + ++ + Sbjct: 161 VDDVHKYAPKARILQYDDYGQAMSALKANQGVALTTDNGLLAGIAQEN---PGYKLVGGV 217 Query: 221 ISKSPLAPAIIQGDTE 236 S +P A+ +G + Sbjct: 218 YSNAPYGIAVNKGQKQ 233 >gi|150019590|ref|YP_001311844.1| extracellular solute-binding protein [Clostridium beijerinckii NCIMB 8052] gi|149906055|gb|ABR36888.1| extracellular solute-binding protein, family 3 [Clostridium beijerinckii NCIMB 8052] Length = 278 Score = 40.0 bits (92), Expect = 0.53, Method: Compositional matrix adjust. Identities = 56/233 (24%), Positives = 98/233 (42%), Gaps = 22/233 (9%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFA---EVKANGDWKGFDVDFCRALSSAIFDDPSK 77 S+NAS L IK +G L G + + EV GFD+D + ++ + + Sbjct: 37 SSNASALQAIKSKGKLVIGTSADYPPYEFHKEVDGKDKIVGFDIDIAQEIAKDL---GVE 93 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KK 135 ++ + +ALQS +ID++ T E F I Y F++ + Sbjct: 94 LEVKDMAFDGLLVALQSDKIDMVFAG--MTPTDERKQNADFSDIYYTATHRFVLRSGDEA 151 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 GI+ + L I VQ G+ E D F A N+K ++V ++ + ++ DA Sbjct: 152 GITKMEDLKNKKIGVQKGSIQEGIAKDNFDAANIKS----LDKVTDLILDLKNNKVDA-- 205 Query: 196 GDISALYALKLTNDRPSEHVILPDIIS-KSP---LAPAIIQGDTEWYNIVSWT 244 + A + N +E + + D + K P A A+ +G T+ + V+ T Sbjct: 206 --VLAEQPVAQINVDKNEGIAIADKLEVKDPDGGSAIAMKKGSTDLTDQVNKT 256 >gi|256844627|ref|ZP_05550112.1| glutamine-binding protein [Lactobacillus crispatus 125-2-CHN] gi|256613168|gb|EEU18372.1| glutamine-binding protein [Lactobacillus crispatus 125-2-CHN] Length = 272 Score = 40.0 bits (92), Expect = 0.54, Method: Compositional matrix adjust. Identities = 39/196 (19%), Positives = 81/196 (41%), Gaps = 10/196 (5%) Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 +T L G +K G +GF++D +AL+ + +K ++ A R L++ +D + Sbjct: 48 DTRLFGLTNIKT-GHIEGFEIDLAKALTKQMLGKDAKTDFVTTTANTRIPLLKNGNVDAV 106 Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 T+ E + + F + G ++ I +V L G ++ GTT Sbjct: 107 L--ATMTITPERAKQVTFSKPYFPAGSSLLVPNNSKIKNVKDLEGKTVLAVKGTTA---- 160 Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220 D + K + ++ + +A +A++ A T D L + N + ++ + Sbjct: 161 VDDVHKYAPKARILQYDDYGQAMSALKANQGVALTTDNGLLAGIAQEN---PGYKLVGGV 217 Query: 221 ISKSPLAPAIIQGDTE 236 S +P A+ +G + Sbjct: 218 YSNAPYGIAVNKGQKQ 233 >gi|238762870|ref|ZP_04623838.1| Glutamate/aspartate periplasmic-binding protein [Yersinia kristensenii ATCC 33638] gi|238698881|gb|EEP91630.1| Glutamate/aspartate periplasmic-binding protein [Yersinia kristensenii ATCC 33638] Length = 304 Score = 40.0 bits (92), Expect = 0.54, Method: Compositional matrix adjust. Identities = 51/252 (20%), Positives = 99/252 (39%), Gaps = 9/252 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 A L IK G + G V F+ G+ D+ + AI + P +++ Sbjct: 32 ADTLKKIKDNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNLIVDAIKKKLNAPDLQVK 91 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T L R+ AF + G + K I Sbjct: 92 LIPITSQNRIPLLQNGTFDFECGSTTNNLERQQQA--AFSNTIFVVGTRLLTKKGSEIKD 149 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L+G + V +GTT+E+ L + NM I + + + R A+ D + Sbjct: 150 FKDLAGKPVVVTSGTTSEVLLNKLNEKDNMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 209 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L + +P + I+ S+ + + D + ++ T + +A+ G+ +K Sbjct: 210 LLAGERAKAKKPDQWDIVGTPQSQEAYGCMLRKNDPAFKALLDET---IASAQTSGVAEK 266 Query: 260 NINQVSKDTTNP 271 + ++ K+ P Sbjct: 267 SFDRWFKNPIPP 278 >gi|205357022|ref|ZP_02344159.2| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205324568|gb|EDZ12407.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 245 Score = 40.0 bits (92), Expect = 0.54, Method: Compositional matrix adjust. Identities = 49/201 (24%), Positives = 81/201 (40%), Gaps = 30/201 (14%) Query: 47 FAEVKANGDWKGFDVDFCRAL-----SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101 F + AN GFDVD AL +S F + + +P +L+ ++ D + Sbjct: 36 FESMDANNKIVGFDVDLANALCKEIDASCTFTNQAFDSLIP--------SLKFRRFDAVM 87 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 D T RE + L P Y+D + ++ +SV QL G ++ VQ GTT + + Sbjct: 88 AGMDITPEREKQV-LFTTP--YYDNSALFVGQQGKYTSVDQLKGKNVGVQNGTTHQKFI- 143 Query: 162 DYFKAHNMKYHP----IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHV 215 M HP + ++ + + R DA GD + + N + P Sbjct: 144 -------MDKHPEITTVPYDSYQNAKLDLQNGRIDAVFGDTAVVTEWLKANPKLAPVGDK 196 Query: 216 ILPDIISKSPLAPAIIQGDTE 236 + + L A+ QG+TE Sbjct: 197 VTDKDYFGTGLGIAVRQGNTE 217 >gi|156934639|ref|YP_001438555.1| hypothetical protein ESA_02473 [Cronobacter sakazakii ATCC BAA-894] gi|156532893|gb|ABU77719.1| hypothetical protein ESA_02473 [Cronobacter sakazakii ATCC BAA-894] Length = 249 Score = 40.0 bits (92), Expect = 0.54, Method: Compositional matrix adjust. Identities = 52/203 (25%), Positives = 80/203 (39%), Gaps = 34/203 (16%) Query: 47 FAEVKANGDWKGFDVDFCRALSSAI-----FDDPSKIQYLPLNAKERFLALQSKQIDILS 101 F + A GFDVD AL I F + + +P AL+ K++D + Sbjct: 40 FESMDAGNKIVGFDVDLANALCKEIEATCTFTNQAFDSLIP--------ALKFKRVDAVM 91 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 D T RE + L P Y+D + + SS+ QL G + VQ GTT + + Sbjct: 92 AGMDITPEREKQV-LFTTP--YYDNSALFVGLQGKNSSIEQLKGKRVGVQNGTTHQKYIT 148 Query: 162 DYFKAHNMKYHP----IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 D HP + ++ + + R DA GD + + TN P + Sbjct: 149 D--------KHPEITTVPYDSYQTARLDLQNGRIDAVFGDTAVVTEWLKTN--PKLAAVG 198 Query: 218 PDIISK----SPLAPAIIQGDTE 236 + K + L A+ QG+TE Sbjct: 199 DKVTDKDYFGTGLGIAVRQGNTE 221 >gi|330984782|gb|EGH82885.1| cystine transporter subunit [Pseudomonas syringae pv. lachrymans str. M301315] Length = 265 Score = 40.0 bits (92), Expect = 0.54, Method: Compositional matrix adjust. Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 12/238 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + + F S L L+++ + A L IK G L G+ F+ V NG GF Sbjct: 6 IRRTFLFSALSLMLVTGIAGQAMAGEQLQKIKDSGTLNVGLEGTYPPFSFVDENGKLTGF 65 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 +V+F AL+ + +KIQ P AL SK++D++ + R+ + Sbjct: 66 EVEFSEALAKEL-GVKAKIQ--PSKWDGILAALDSKRLDVVINQVTISEERKKKYDFS-E 121 Query: 120 PITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 P T Q ++ K I + L+G + V GT E L + +K + + Sbjct: 122 PYTVSGIQALVLKKNADTIKTAKDLTGKKVGVGLGTNYEQWLKENVPGAIVKTYDDDPSK 181 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 ++++ R DA + L AL++ ++ V D S+ A+ +G+ E Sbjct: 182 IQDLSVG----RIDAIL--VDRLAALEMATKTKNKLVPAGDAFSRQESGIALRKGEPE 233 >gi|239616531|ref|YP_002939853.1| extracellular solute-binding protein family 3 [Kosmotoga olearia TBF 19.5.1] gi|239505362|gb|ACR78849.1| extracellular solute-binding protein family 3 [Kosmotoga olearia TBF 19.5.1] Length = 240 Score = 40.0 bits (92), Expect = 0.54, Method: Compositional matrix adjust. Identities = 48/200 (24%), Positives = 88/200 (44%), Gaps = 20/200 (10%) Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 E NG++KGFD+D RA++ + I+ + ++ AL S +DI+ T Sbjct: 34 EYVENGEFKGFDMDLIRAIADEM---GFNIKIVDMSFDSLIAALVSGNLDIVIAGMTITA 90 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTELTLADYFKAH 167 RE + + +P Y+ I+ K+ +V+ L G I VQ GTT D + Sbjct: 91 EREAVVDFS-KP--YWTADQSIIVKEDSDYTVTVLFGKHDIGVQTGTT-----GDLWVEE 142 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL-----YALKLTNDRPSEHVILPDIIS 222 N+ I+ + + D + D G++ A+ A + RP + I+ I++ Sbjct: 143 NLVKTKILTGKFKRYD-TFVLALTDLINGNVDAIVLDSPVAERFAETRPVK--IVGIIVT 199 Query: 223 KSPLAPAIIQGDTEWYNIVS 242 A+ +G+ E N+++ Sbjct: 200 GEEYGIAVREGNKELLNLIN 219 >gi|296269107|ref|YP_003651739.1| extracellular solute-binding protein family 3 [Thermobispora bispora DSM 43833] gi|296091894|gb|ADG87846.1| extracellular solute-binding protein family 3 [Thermobispora bispora DSM 43833] Length = 289 Score = 40.0 bits (92), Expect = 0.54, Method: Compositional matrix adjust. Identities = 34/141 (24%), Positives = 57/141 (40%), Gaps = 3/141 (2%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 SI+ K L GI G K +G + GFDVD R ++ + S I + Sbjct: 39 SIVDKAKNEKKLTIGIKIDQPGLGLRKPDGTYAGFDVDVARYIAKELGVPESGITFKEAQ 98 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVSQL 143 + R +Q Q+D++ +++ E ++F GQ ++ I+ V L Sbjct: 99 SANREPFIQQGQVDMVIAT--YSITDERKEKVSFAGPYLVTGQDILIRADDDSITDVQSL 156 Query: 144 SGASICVQAGTTTELTLADYF 164 +C G+ + LAD F Sbjct: 157 KDKKVCGAQGSISPKRLADMF 177 >gi|197250151|ref|YP_002146069.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197213854|gb|ACH51251.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 266 Score = 40.0 bits (92), Expect = 0.54, Method: Compositional matrix adjust. Identities = 49/224 (21%), Positives = 91/224 (40%), Gaps = 12/224 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 SF+ + +L +K+RG L G+ F+ +G GF+VDF AL+ + K Sbjct: 27 SFA-DEGLLNKVKERGTLLVGLEGTYPPFSFQGEDGKLTGFEVDFAEALAKHL---GVKA 82 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-I 137 P +L +K+ID++ + +R+ + P T Q + +G I Sbjct: 83 SLKPTKWDGILASLDAKRIDVVINQVTISDVRKKKYDFS-TPYTVSGVQALVKKGNEGTI 141 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + + L G + V GT E L + + +++ + + +++ R R DA Sbjct: 142 KTAADLQGKKVGVGLGTNYEEWLRQHVQGVDIRTYDDDPTKYQDL----RVGRIDAIL-- 195 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + L AL L + D S+ A+ +G+ + V Sbjct: 196 VDRLAALDLVKKTKGTLAVTGDAFSRQESGVALRKGNEDLLKAV 239 >gi|168234124|ref|ZP_02659182.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168822994|ref|ZP_02834994.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194470856|ref|ZP_03076840.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197264655|ref|ZP_03164729.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|200389342|ref|ZP_03215953.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|194457220|gb|EDX46059.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197242910|gb|EDY25530.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|199601787|gb|EDZ00333.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205331855|gb|EDZ18619.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205340677|gb|EDZ27441.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320085428|emb|CBY95209.1| Cystine-binding periplasmic protein CBP; Protein fliY; Sulfate starvation-induced protein 7; SSI7; Flags: Precursor [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|322616947|gb|EFY13855.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322618187|gb|EFY15079.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625857|gb|EFY22676.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322626309|gb|EFY23119.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322632724|gb|EFY29469.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322639066|gb|EFY35759.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322640507|gb|EFY37160.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322649895|gb|EFY46316.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322655503|gb|EFY51811.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322660281|gb|EFY56519.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322662962|gb|EFY59169.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668147|gb|EFY64306.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674093|gb|EFY70187.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675554|gb|EFY71628.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322683034|gb|EFY79050.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686728|gb|EFY82706.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323195383|gb|EFZ80563.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323199274|gb|EFZ84369.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204439|gb|EFZ89445.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207529|gb|EFZ92477.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323211854|gb|EFZ96685.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217514|gb|EGA02233.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323219589|gb|EGA04073.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323223592|gb|EGA07907.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323231536|gb|EGA15649.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235979|gb|EGA20058.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240549|gb|EGA24592.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323245441|gb|EGA29441.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323250211|gb|EGA34103.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323253978|gb|EGA37802.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323255495|gb|EGA39256.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262092|gb|EGA45655.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266215|gb|EGA49705.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270676|gb|EGA54117.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 266 Score = 40.0 bits (92), Expect = 0.55, Method: Compositional matrix adjust. Identities = 49/224 (21%), Positives = 91/224 (40%), Gaps = 12/224 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 SF+ + +L +K+RG L G+ F+ +G GF+VDF AL+ + K Sbjct: 27 SFA-DEGLLNKVKERGTLLVGLEGTYPPFSFQGEDGKLTGFEVDFAEALAKHL---GVKA 82 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-I 137 P +L +K+ID++ + +R+ + P T Q + +G I Sbjct: 83 SLKPTKWDGILASLDAKRIDVVINQVTISDVRKKKYDFS-TPYTVSGVQALVKKGNEGTI 141 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + + L G + V GT E L + + +++ + + +++ R R DA Sbjct: 142 KTAADLQGKKVGVGLGTNYEEWLRQHVQGVDIRTYDDDPTKYQDL----RVGRIDAIL-- 195 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + L AL L + D S+ A+ +G+ + V Sbjct: 196 VDRLAALDLVKKTKGTLAVTGDAFSRQESGVALRKGNEDLLKAV 239 >gi|168236652|ref|ZP_02661710.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194737342|ref|YP_002113776.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194712844|gb|ACF92065.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197290231|gb|EDY29587.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 302 Score = 40.0 bits (92), Expect = 0.56, Method: Compositional matrix adjust. Identities = 48/234 (20%), Positives = 88/234 (37%), Gaps = 6/234 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 S L I K G + G V F+ G+ D+ A+ A+ + P +++ Sbjct: 30 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T L R+ AF + G + K I Sbjct: 90 LIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQA--AFSDTIFVVGTRLLTKKGGDIKD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L G ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 148 FPDLKGKAVVVTSGTTSEILLHKLNEEQKMGMRIISAKDHGDSFRTLESGRAVAFMMDDA 207 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 L + +P I+ S+ + + D E+ ++ T T+ E Sbjct: 208 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKNDPEFKKLMDDTIAQAQTSGE 261 >gi|172063476|ref|YP_001811127.1| extracellular solute-binding protein [Burkholderia ambifaria MC40-6] gi|171995993|gb|ACB66911.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MC40-6] Length = 298 Score = 40.0 bits (92), Expect = 0.56, Method: Compositional matrix adjust. Identities = 45/198 (22%), Positives = 77/198 (38%), Gaps = 14/198 (7%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD-------PS-KI 78 L IK G + GI V F+ D + ++ + R +++ I D P+ + Sbjct: 29 LKKIKDTGIVSLGIRESSVPFSY----SDNQQKNIGYSRDIAARIIDALKVELKAPNLTV 84 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + +P+ ++ R LQ+ ID +T TL R+ AF + G F K G+ Sbjct: 85 KEIPITSQNRIPLLQNGTIDFECGSTTNTLERQKQA--AFSNSIFLYGIRFSTRKDSGVK 142 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + L+G ++ AGT+ E L + M I + E R A+ D Sbjct: 143 DFADLAGKTVATTAGTSDERLLRKLNEEKGMNMTIISAKDHAEAFMNVTTGRAVAFVMDE 202 Query: 199 SALYALKLTNDRPSEHVI 216 LY + P + + Sbjct: 203 PLLYGEIAKDRNPGAYTV 220 >gi|237732152|ref|ZP_04562633.1| arginine-binding periplasmic protein 1 [Citrobacter sp. 30_2] gi|283832472|ref|ZP_06352213.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Citrobacter youngae ATCC 29220] gi|226907691|gb|EEH93609.1| arginine-binding periplasmic protein 1 [Citrobacter sp. 30_2] gi|291072131|gb|EFE10240.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Citrobacter youngae ATCC 29220] Length = 243 Score = 40.0 bits (92), Expect = 0.57, Method: Compositional matrix adjust. Identities = 49/203 (24%), Positives = 80/203 (39%), Gaps = 34/203 (16%) Query: 47 FAEVKANGDWKGFDVDFCRALSSAI-----FDDPSKIQYLPLNAKERFLALQSKQIDILS 101 F + AN GFDVD AL I F + + +P +L+ ++ D + Sbjct: 34 FESIDANNKIVGFDVDLANALCKEIDATCTFTNQAFDSLIP--------SLKFRRFDAVM 85 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 D T RE + L P Y+D + ++ +S+ QL G + VQ GTT + + Sbjct: 86 AGMDITPEREKQV-LFTTP--YYDNSALFVGQQGKYTSIDQLKGKKVGVQNGTTHQKFI- 141 Query: 162 DYFKAHNMKYHPIV----FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 M HP V ++ + + R D GD + + + D P + Sbjct: 142 -------MDKHPEVTTVPYDSYQNAKLDLQNGRIDGVFGDTAVV--TEWLKDNPKLAAVG 192 Query: 218 PDIISK----SPLAPAIIQGDTE 236 + K + L A+ QG+TE Sbjct: 193 DKVTDKDYFGTGLGIAVRQGNTE 215 >gi|291086278|ref|ZP_06355258.2| putative ABC transporter, substrate binding protein [Citrobacter youngae ATCC 29220] gi|291068723|gb|EFE06832.1| putative ABC transporter, substrate binding protein [Citrobacter youngae ATCC 29220] Length = 297 Score = 40.0 bits (92), Expect = 0.58, Method: Compositional matrix adjust. Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 10/141 (7%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD----DPSKI 78 NA+ L I+ L G L F+ NG G+ + C ++ + I Sbjct: 36 NAATLDHIQNSSVLNVGYRQ-LPPFSLTDNNGKVTGYTIAVCNMIADKLRQYLKLSSLTI 94 Query: 79 QYLPLNAKERFLALQSKQIDI-LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 Y+P+N ERF AL +++ID+ S NT+ E ++F Y I +K I Sbjct: 95 HYIPVNFGERFSALNTRKIDMDCSVNTNAP---ERMSSVSFSIDYYTAKMRIIALRKNNI 151 Query: 138 SSVSQLSGASICVQAGTTTEL 158 S+ L G ++ + G++ +L Sbjct: 152 HSIVDLKGRTVSL-PGSSKDL 171 >gi|227877818|ref|ZP_03995842.1| glutamine ABC superfamily ATP binding cassette transporter, binding precursor [Lactobacillus crispatus JV-V01] gi|256850696|ref|ZP_05556120.1| glutamine-binding protein [Lactobacillus crispatus MV-1A-US] gi|293381615|ref|ZP_06627599.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus crispatus 214-1] gi|227862579|gb|EEJ70074.1| glutamine ABC superfamily ATP binding cassette transporter, binding precursor [Lactobacillus crispatus JV-V01] gi|256712467|gb|EEU27464.1| glutamine-binding protein [Lactobacillus crispatus MV-1A-US] gi|290921799|gb|EFD98817.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus crispatus 214-1] Length = 272 Score = 40.0 bits (92), Expect = 0.58, Method: Compositional matrix adjust. Identities = 39/196 (19%), Positives = 81/196 (41%), Gaps = 10/196 (5%) Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 +T L G +K G +GF++D +AL+ + +K ++ A R L++ +D + Sbjct: 48 DTRLFGLTNIKT-GHIEGFEIDLAKALTKQMLGKDAKTDFVTTTANTRIPLLKNGNVDAV 106 Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 T+ E + + F + G ++ I +V L G ++ GTT Sbjct: 107 L--ATMTITPERAKQVTFSKPYFPAGSSLLVPNNSKIKNVKDLEGKTVLAVKGTTA---- 160 Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220 D + K + ++ + +A +A++ A T D L + N + ++ + Sbjct: 161 VDDVHKYAPKARILQYDDYGQAMSALKANQGVALTTDNGLLAGIAQEN---PGYKLVGGV 217 Query: 221 ISKSPLAPAIIQGDTE 236 S +P A+ +G + Sbjct: 218 YSNAPYGIAVNKGQKQ 233 >gi|168239190|ref|ZP_02664248.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194736301|ref|YP_002114987.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194711803|gb|ACF91024.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197288089|gb|EDY27476.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 266 Score = 40.0 bits (92), Expect = 0.58, Method: Compositional matrix adjust. Identities = 49/224 (21%), Positives = 91/224 (40%), Gaps = 12/224 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 SF+ + +L +K+RG L G+ F+ +G GF+VDF AL+ + K Sbjct: 27 SFA-DEGLLNKVKERGTLLVGLEGTYPPFSFQGEDGKLTGFEVDFAEALAKHL---GVKA 82 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-I 137 P +L +K+ID++ + +R+ + P T Q + +G I Sbjct: 83 SLKPTKWDGILASLDAKRIDVVINQVTISDVRKKKYDFS-TPYTISGVQALVKKGNEGTI 141 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + + L G + V GT E L + + +++ + + +++ R R DA Sbjct: 142 KTAADLQGKKVGVGLGTNYEEWLRQHVQGVDIRTYDDDPTKYQDL----RVGRIDAIL-- 195 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + L AL L + D S+ A+ +G+ + V Sbjct: 196 VDRLAALDLVKKTKGTLAVTGDAFSRQESGVALRKGNEDLLKAV 239 >gi|16764042|ref|NP_459657.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56414206|ref|YP_151281.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197363130|ref|YP_002142767.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|16419178|gb|AAL19616.1| glutamate/aspartate transporter [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56128463|gb|AAV77969.1| ABC transporter periplasmic binding protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197094607|emb|CAR60128.1| ABC transporter periplasmic binding protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|326622408|gb|EGE28753.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 308 Score = 40.0 bits (92), Expect = 0.58, Method: Compositional matrix adjust. Identities = 48/234 (20%), Positives = 88/234 (37%), Gaps = 6/234 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 S L I K G + G V F+ G+ D+ A+ A+ + P +++ Sbjct: 36 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 95 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T L R+ AF + G + K I Sbjct: 96 LIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQA--AFSDTIFVVGTRLLTKKGGDIKD 153 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L G ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 154 FPDLKGKAVVVTSGTTSEILLHKLNEEQKMGMRIISAKDHGDSFRTLESGRAVAFMMDDA 213 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 L + +P I+ S+ + + D E+ ++ T T+ E Sbjct: 214 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKNDPEFKKLMDDTIAQAQTSGE 267 >gi|260102963|ref|ZP_05753200.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus helveticus DSM 20075] gi|260083248|gb|EEW67368.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus helveticus DSM 20075] gi|328463862|gb|EGF35396.1| amino acid ABC transporter, amino acid-binding protein [Lactobacillus helveticus MTCC 5463] Length = 267 Score = 39.7 bits (91), Expect = 0.59, Method: Compositional matrix adjust. Identities = 33/138 (23%), Positives = 61/138 (44%), Gaps = 7/138 (5%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS-KIQ 79 S N I+K + G++ V K NG G+D+D R A+F + K+ Sbjct: 22 SNNPDSWQTIEKNKQVVIGLDDSFVPMGFEKKNGQLTGYDIDLAR----AVFKEYGIKVS 77 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 + ++ L++ ID++ +++ E +AF + Q ++ K GI S Sbjct: 78 FQTIDWSMNVTELRNGTIDLIWNG--YSITPERKKKVAFSRPYLRNRQVLVVKKNSGIDS 135 Query: 140 VSQLSGASICVQAGTTTE 157 V+Q+ + +Q G+T E Sbjct: 136 VAQMKKYELGMQTGSTAE 153 >gi|167646870|ref|YP_001684533.1| cystine transporter subunit [Caulobacter sp. K31] gi|167349300|gb|ABZ72035.1| extracellular solute-binding protein family 3 [Caulobacter sp. K31] Length = 265 Score = 39.7 bits (91), Expect = 0.59, Method: Compositional matrix adjust. Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 4/122 (3%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 L+ G+ F +G GF+VDF +AL++ + P ++ P AL++K Sbjct: 45 LRIGLEGTYPPFNFQDKDGQLAGFEVDFAKALAAQMKVKP---EFSPSPFAGLLGALEAK 101 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 +ID++ T R + RP T Q + + GIS+ + L+G + V GT Sbjct: 102 RIDVVINQITITPERAAKYDFS-RPYTISGIQIIVRAGQTGISTPADLAGKKVGVGLGTN 160 Query: 156 TE 157 E Sbjct: 161 YE 162 >gi|87121142|ref|ZP_01077033.1| polar amino acid uptake family ABC transporter, periplasmic substrate-binding protein [Marinomonas sp. MED121] gi|86163634|gb|EAQ64908.1| polar amino acid uptake family ABC transporter, periplasmic substrate-binding protein [Marinomonas sp. MED121] Length = 267 Score = 39.7 bits (91), Expect = 0.59, Method: Compositional matrix adjust. Identities = 55/246 (22%), Positives = 102/246 (41%), Gaps = 14/246 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +S + + ++ F+S T+A L DIK +G L + + G+ G + Sbjct: 1 MKKITTISSILISLIGFSSV-THADDLADIKAKGTLVVAVKADYKPYGYRNDQGEIVGLE 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL-SRNTDWTLLREISLGLAFR 119 +D + ++ + ++ +P + R L ++D+L + +D RE L Sbjct: 60 IDLAQNVAERL---GVSLELVPAQSSNRMQFLIDGKVDLLIATMSDKPERRE--LVYIAD 114 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G I K +S L+G +C G F A + F Sbjct: 115 QAYYSSGSNIIAKKSSQYTSWGDLNGQKVCGIKGAFYNQETETTFGA-----TIVPFGSS 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP-DIISKSPLAPAIIQGDTEWY 238 EE AA + +C+A+ D S + A KL + + S+ +P I+ +P A+ G+ ++ Sbjct: 170 EESLAALKQGKCNAFVYDDSFI-AGKLNDPQWSQDYEMPLPTINDNPWGLAVRLGEDNFH 228 Query: 239 NIVSWT 244 ++ T Sbjct: 229 AFMNST 234 >gi|330817961|ref|YP_004361666.1| Cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia gladioli BSR3] gi|327370354|gb|AEA61710.1| Cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia gladioli BSR3] Length = 258 Score = 39.7 bits (91), Expect = 0.60, Method: Compositional matrix adjust. Identities = 34/164 (20%), Positives = 72/164 (43%), Gaps = 10/164 (6%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 ++ G++ F V NGD GFDVD R + + I + ++ + AL+++ Sbjct: 25 VRIGVDASYPPFESVAKNGDIVGFDVDLTREICTRI---AVRCTWVAQDLDGIIPALKAR 81 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAG 153 + D++ + T R + + + +D ++ K + +V+ L G ++ V+ G Sbjct: 82 KFDVIVSSLTVTDKRREQIDFSDK---LYDAPARMIAKAGSPLLPTVASLKGKTVGVEQG 138 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 +T E Y++ + P ++ +++ A R DA D Sbjct: 139 STQETYAKTYWETQGVTIVP--YQNQDQVYADLGTGRLDAALQD 180 >gi|325685933|gb|EGD27997.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 289 Score = 39.7 bits (91), Expect = 0.60, Method: Compositional matrix adjust. Identities = 46/208 (22%), Positives = 84/208 (40%), Gaps = 20/208 (9%) Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 +T L G +K G +GF++D A++ I SK + P+ K R L + +D + Sbjct: 57 DTKLFGLTNIK-TGKIEGFEIDLATAITKQILGPKSKAVFRPITEKTRITLLHNGSLDAV 115 Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 + T+ +E + F + + + I+ K I S++ L+ + V A T++ Sbjct: 116 I--STMTITKERMKVIDFSDVYFNANESMIVKKSSKIRSIADLNKKGVVVIAIKGTDVA- 172 Query: 161 ADYFKAHNMKYHPIVFERVEEID------AAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 K P RV++ D A +A + D D L L D P E Sbjct: 173 -----NQVAKLAPKA--RVKQFDDYGSAFNALKAGQGDVMIDDNGILAG--LIADTP-EF 222 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVS 242 + +++ P + +G TE ++ Sbjct: 223 TLTKASLAEEPYGIGVEKGQTEMRQAIN 250 >gi|167588750|ref|ZP_02381138.1| extracellular solute-binding protein family 3 [Burkholderia ubonensis Bu] Length = 302 Score = 39.7 bits (91), Expect = 0.60, Method: Compositional matrix adjust. Identities = 47/192 (24%), Positives = 75/192 (39%), Gaps = 15/192 (7%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD-------PS-KI 78 L IK G + GI V F+ D + ++ + R ++S I + P + Sbjct: 33 LKKIKDTGVVSLGIRESSVPFSY----SDNQQKNIGYSRDIASRIVEQLKTELNLPGLAV 88 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + +P+ ++ R LQ+ ID +T TL R+ AF + G F K G+ Sbjct: 89 KEIPITSQNRIPLLQNGTIDFECGSTTNTLERQKQA--AFSNSIFLYGIRFSTRKDSGVK 146 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 L+G ++ AGT+ E L + M I + E R A+ D Sbjct: 147 DFPDLAGKTVATTAGTSDERLLRKLNEEKGMNMTIISAKDHAEAFMNVTTGRAVAFVMDE 206 Query: 199 SALYALKLTNDR 210 LY +L DR Sbjct: 207 PLLYG-ELAKDR 217 >gi|26991700|ref|NP_747125.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas putida KT2440] gi|24986801|gb|AAN70589.1|AE016701_9 amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas putida KT2440] gi|313501000|gb|ADR62366.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas putida BIRD-1] Length = 266 Score = 39.7 bits (91), Expect = 0.60, Method: Compositional matrix adjust. Identities = 52/246 (21%), Positives = 100/246 (40%), Gaps = 14/246 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + +L + + A + D KRG L+ G++ + F G+ GF+ Sbjct: 1 MIKKYLSRLLVGVTALVAVTAAQAGAIDDAVKRGTLRVGMDPTYMPFQMTNKRGEIIGFE 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A++ ++ K + + AL + + D++ + TL +E +L L F Sbjct: 61 VDILKAMAKSM---GVKFEAVSTAYDGIIPALLTDKFDMIG--SGMTLTQERNLRLNFSE 115 Query: 121 ITYFDGQGFIMHKKKG--ISSVSQLSGAS--ICVQAGTTTELTLADYFKAHNMKYHPIVF 176 GQ ++ K+ I S L+ + + GTT E+ KYH Sbjct: 116 PFIVVGQTLLIRKELAGEIKSYKDLNNEKYRLTSKLGTTGEMVSKKLI--SKAKYHGYDN 173 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E+ +D + DA+ D + + + + + L + + PLA + +GD + Sbjct: 174 EQEAVMDVV--NGKADAFVYD-APYNVVAVDKAGAGKLLFLDEPFTYEPLAFGLKKGDYD 230 Query: 237 WYNIVS 242 N ++ Sbjct: 231 SINFIN 236 >gi|270284246|ref|ZP_05965800.2| glutamate-binding protein [Bifidobacterium gallicum DSM 20093] gi|270277400|gb|EFA23254.1| glutamate-binding protein [Bifidobacterium gallicum DSM 20093] Length = 286 Score = 39.7 bits (91), Expect = 0.61, Method: Compositional matrix adjust. Identities = 31/137 (22%), Positives = 64/137 (46%), Gaps = 4/137 (2%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 + G ++ GI G K +G ++GFDVD R +++++ + I + K+R Sbjct: 43 EEGKIRIGIKFDQPGLG-FKKSGTYEGFDVDVARYIANSLGYSDADIVWKEAPPKQREAM 101 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICV 150 LQ+ +D++ T R+ + ++F + GQ ++ I L+G +C Sbjct: 102 LQNGDVDMILATYSITDARKQA--VSFAGPYFVAGQDLMVRADDDSIKGPQDLNGKRLCS 159 Query: 151 QAGTTTELTLADYFKAH 167 G+T+ +T+ + F + Sbjct: 160 VTGSTSAVTVKEKFASE 176 >gi|116334344|ref|YP_795871.1| amino acid ABC transporter periplasmic protein [Lactobacillus brevis ATCC 367] gi|116099691|gb|ABJ64840.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus brevis ATCC 367] Length = 278 Score = 39.7 bits (91), Expect = 0.61, Method: Compositional matrix adjust. Identities = 38/171 (22%), Positives = 74/171 (43%), Gaps = 11/171 (6%) Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 +T L G + K +G KGF+VD +AL+ + +K +++ + + R L++ ID + Sbjct: 51 DTRLFGLLDTK-DGKIKGFEVDLAKALTKQMLGKNAKAKFIQVTSSTRMPMLKNGNIDAI 109 Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 T R + F ++ GQ ++ + I +V L+ Q GT + Sbjct: 110 IATMTNTAERRKQVD--FSNTYFYAGQSLLVKQGSSIKNVKDLNK-----QKGTVLGVVG 162 Query: 161 ADYFK-AHNMKYHPIVFERVEEIDA--AYRAHRCDAYTGDISALYALKLTN 208 +D + + + V + + A A ++ + A T D LY + + N Sbjct: 163 SDSVENVQKVAPNATVLQLTDYAQAMTALKSGQGQALTTDNGILYGMSVQN 213 >gi|319785577|ref|YP_004145053.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317171465|gb|ADV15003.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 282 Score = 39.7 bits (91), Expect = 0.61, Method: Compositional matrix adjust. Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 11/147 (7%) Query: 54 GDWKGFDVDFCRALSSAI-FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G GF +D RA+ + + + +IQ LP E ALQ + + + T Sbjct: 69 GKLSGFHIDLARAICAELGIVEKCQIQALPWAELEG--ALQKGEGEAIIAGIAATPESRA 126 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMK 170 + + R F + F+M K K ++ +L G + V +G+ E L DYF + Sbjct: 127 TYAFS-RSYLQFPAR-FVMPKGKALTEPVFDKLHGKRVGVISGSAHERMLRDYFNTVQV- 183 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGD 197 + F+R EE+ A +A + DA GD Sbjct: 184 ---VPFDRPEELYADLKAGKVDAAFGD 207 >gi|260866803|ref|YP_003233205.1| periplasmic-binding component GltI [Escherichia coli O111:H- str. 11128] gi|257763159|dbj|BAI34654.1| periplasmic-binding component GltI [Escherichia coli O111:H- str. 11128] gi|323179868|gb|EFZ65425.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli 1180] Length = 302 Score = 39.7 bits (91), Expect = 0.61, Method: Compositional matrix adjust. Identities = 35/155 (22%), Positives = 62/155 (40%), Gaps = 6/155 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 S L I K G + G V F+ G+ D+ A+ A+ + P +++ Sbjct: 30 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ AF + G + K I Sbjct: 90 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQA--AFSDTIFVVGTRLLTKKSGDIKD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + L G ++ V +GTT+E+ L + M I Sbjct: 148 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRII 182 >gi|224582740|ref|YP_002636538.1| arginine-binding periplasmic protein 1 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224467267|gb|ACN45097.1| arginine-binding periplasmic protein 1 precursor [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 245 Score = 39.7 bits (91), Expect = 0.61, Method: Compositional matrix adjust. Identities = 47/197 (23%), Positives = 80/197 (40%), Gaps = 22/197 (11%) Query: 47 FAEVKANGDWKGFDVDFCRAL-----SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101 F + AN GFDVD AL +S F + + +P +L+ ++ D + Sbjct: 36 FESMDANNKIVGFDVDLANALCKEIDASCTFTNQAFDSLIP--------SLKFRRFDAVM 87 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 D T RE + L P Y+D + ++ +SV QL G + VQ GTT + + Sbjct: 88 AGMDITPEREKQV-LFTTP--YYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFIM 144 Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPD 219 D + + + ++ + + R DA GD + + N + P + Sbjct: 145 D----KHQEITTVPYDSYQNAKLDLQNGRIDAVFGDTAVVTEWLKANPKLAPVGDKVTDK 200 Query: 220 IISKSPLAPAIIQGDTE 236 + L A+ QG+TE Sbjct: 201 DYFGTGLGIAVRQGNTE 217 >gi|161613484|ref|YP_001587449.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|161362848|gb|ABX66616.1| hypothetical protein SPAB_01201 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 244 Score = 39.7 bits (91), Expect = 0.61, Method: Compositional matrix adjust. Identities = 49/224 (21%), Positives = 91/224 (40%), Gaps = 12/224 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 SF+ + +L +K+RG L G+ F+ +G GF+VDF AL+ + K Sbjct: 5 SFA-DEGLLNKVKERGTLLVGLEGTYPPFSFQGEDGKLTGFEVDFAEALAKHL---GVKA 60 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-I 137 P +L +K+ID++ + +R+ + P T Q + +G I Sbjct: 61 LLKPTKWDGILASLDAKRIDVVINQVTISDVRKKKYDFS-TPYTVSGVQALVKKGNEGTI 119 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + + L G + V GT E L + + +++ + + +++ R R DA Sbjct: 120 KTAADLQGKKVGVGLGTNYEEWLRQHVQGVDIRTYDDDPTKYQDL----RVGRIDAIL-- 173 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + L AL L + D S+ A+ +G+ + V Sbjct: 174 VDRLAALDLVKKTKGTLAVTGDAFSRQESGVALRKGNEDLLKAV 217 >gi|283835518|ref|ZP_06355259.1| ABC transporter, substrate binding protein [Citrobacter youngae ATCC 29220] gi|291068724|gb|EFE06833.1| ABC transporter, substrate binding protein [Citrobacter youngae ATCC 29220] Length = 310 Score = 39.7 bits (91), Expect = 0.62, Method: Compositional matrix adjust. Identities = 27/105 (25%), Positives = 53/105 (50%), Gaps = 14/105 (13%) Query: 58 GFDVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR--- 110 G+ +D C RAL + + K++++ N+ +F+ +++ DI+ ++ R Sbjct: 66 GYSIDICNSIVRALKTKLQLKNLKVKWVLANSASQFVLIKNHMADIMCIPAFYSQSRHSI 125 Query: 111 -EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 E SL YF F+M K + ++++LSG S+ V++GT Sbjct: 126 SEFSLPF------YFSSTRFVMRKNESNDNLAELSGHSVLVKSGT 164 >gi|330873992|gb|EGH08141.1| cystine transporter subunit [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 268 Score = 39.7 bits (91), Expect = 0.62, Method: Compositional matrix adjust. Identities = 54/212 (25%), Positives = 85/212 (40%), Gaps = 10/212 (4%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L IK G L G+ F+ V NG GF+V+F AL+ + +KIQ P Sbjct: 33 LQKIKDSGTLNVGLEGTYPPFSFVDKNGKLTGFEVEFSEALAKEL-GVKAKIQ--PSKWD 89 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSG 145 AL SK++D++ + R+ + P T Q ++ K I S LSG Sbjct: 90 GILAALDSKRLDVVINQVTISDERKKKYDFS-EPYTISGIQALVLKKNADAIKSAKDLSG 148 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD-ISALYAL 204 + V GT E L +K + +++++ R DA D ++AL Sbjct: 149 KKVGVGLGTNYEQWLKANVPGAEIKTYEDDPTKIQDLSVG----RIDAILVDRLAALEIA 204 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 T D E + S+ A+ +G+ E Sbjct: 205 AKTKDTKRELAPAGEAFSRQESGIALRKGEPE 236 >gi|289624706|ref|ZP_06457660.1| cystine transporter subunit [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289650262|ref|ZP_06481605.1| cystine transporter subunit [Pseudomonas syringae pv. aesculi str. 2250] gi|330865667|gb|EGH00376.1| cystine transporter subunit [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 265 Score = 39.7 bits (91), Expect = 0.62, Method: Compositional matrix adjust. Identities = 51/211 (24%), Positives = 88/211 (41%), Gaps = 11/211 (5%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L IK G L G+ F+ V NG GF+V+F AL+ + +KIQ P Sbjct: 33 LQKIKDSGTLNVGLEGTYPPFSFVDENGKLTGFEVEFSEALAKEL-GVKAKIQ--PSKWD 89 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSG 145 AL SK++D++ + R+ + P T Q ++ K + I + L+G Sbjct: 90 GILAALDSKRLDVVINQVTISEERKKKYDFS-EPYTVSGIQALVLKKNEDTIKTAKDLTG 148 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 + V GT E L + +K + +++++ R DA + L AL+ Sbjct: 149 KKVGVGLGTNYEQWLKENVPGAIVKTYDDDPSKIQDLSVG----RIDAIL--VDRLAALE 202 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + ++ V D S+ A+ +G+ E Sbjct: 203 MATKTKNKLVPAGDAFSRQESGIALRKGEPE 233 >gi|171315678|ref|ZP_02904912.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MEX-5] gi|171099210|gb|EDT43983.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MEX-5] Length = 298 Score = 39.7 bits (91), Expect = 0.62, Method: Compositional matrix adjust. Identities = 45/198 (22%), Positives = 77/198 (38%), Gaps = 14/198 (7%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD-------PS-KI 78 L IK G + GI V F+ D + ++ + R +++ I D P+ + Sbjct: 29 LKKIKDTGIVSLGIRESSVPFSY----SDNQQKNIGYSRDIAARIIDALKAELKAPNLTV 84 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + +P+ ++ R LQ+ ID +T TL R+ AF + G F K G+ Sbjct: 85 KEIPITSQNRIPLLQNGTIDFECGSTTNTLERQKQA--AFSNSIFLYGIRFSTRKDSGVK 142 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + L+G ++ AGT+ E L + M I + E R A+ D Sbjct: 143 DFTDLAGKTVATTAGTSDERLLRKLNEEKGMNMTIISAKDHAEAFMNVTTGRAVAFVMDE 202 Query: 199 SALYALKLTNDRPSEHVI 216 LY + P + + Sbjct: 203 PLLYGEIAKDRNPGAYTV 220 >gi|168764668|ref|ZP_02789675.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC4501] gi|217324409|ref|ZP_03440493.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. TW14588] gi|189365371|gb|EDU83787.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC4501] gi|217320630|gb|EEC29054.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. TW14588] Length = 302 Score = 39.7 bits (91), Expect = 0.62, Method: Compositional matrix adjust. Identities = 35/155 (22%), Positives = 62/155 (40%), Gaps = 6/155 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 S L I K G + G V F+ G+ D+ A+ A+ + P +++ Sbjct: 30 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ AF + G + K I Sbjct: 90 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQA--AFSDTIFVVGTRLLTKKGDDIKD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + L G ++ V +GTT+E+ L + M I Sbjct: 148 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRII 182 >gi|161615117|ref|YP_001589082.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167550797|ref|ZP_02344553.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|168231680|ref|ZP_02656738.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168264402|ref|ZP_02686375.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168465842|ref|ZP_02699724.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168820210|ref|ZP_02832210.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194443341|ref|YP_002039908.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194469057|ref|ZP_03075041.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197248012|ref|YP_002145641.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197262383|ref|ZP_03162457.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|198241916|ref|YP_002214653.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200389609|ref|ZP_03216220.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|238911616|ref|ZP_04655453.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|20141451|sp|Q9ZF60|GLTI_SALTY RecName: Full=Glutamate/aspartate periplasmic-binding protein; Flags: Precursor gi|161364481|gb|ABX68249.1| hypothetical protein SPAB_02884 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194402004|gb|ACF62226.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194455421|gb|EDX44260.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|195631794|gb|EDX50314.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197211715|gb|ACH49112.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197240638|gb|EDY23258.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197936432|gb|ACH73765.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199602054|gb|EDZ00600.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205324274|gb|EDZ12113.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205334029|gb|EDZ20793.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205343265|gb|EDZ30029.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205347107|gb|EDZ33738.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|312911697|dbj|BAJ35671.1| glutamate/aspartate ABC transporter substrate binding protein [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320084938|emb|CBY94727.1| Membrane-bound lytic murein transglycosylase F Murein lyase F; Flags: Precursor [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321226244|gb|EFX51295.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322613209|gb|EFY10152.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322621277|gb|EFY18134.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322623697|gb|EFY20535.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628969|gb|EFY25748.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631691|gb|EFY28445.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322637573|gb|EFY34275.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641913|gb|EFY38543.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322646757|gb|EFY43263.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322651458|gb|EFY47838.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653091|gb|EFY49425.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658811|gb|EFY55066.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664919|gb|EFY61112.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668921|gb|EFY65073.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322670573|gb|EFY66706.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675314|gb|EFY71390.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682215|gb|EFY78240.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322684956|gb|EFY80953.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323193986|gb|EFZ79188.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323197922|gb|EFZ83044.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202031|gb|EFZ87091.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207164|gb|EFZ92117.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210929|gb|EFZ95792.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323214309|gb|EFZ99060.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323219286|gb|EGA03777.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323225503|gb|EGA09733.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323231062|gb|EGA15178.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323234106|gb|EGA18195.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323238199|gb|EGA22257.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323242567|gb|EGA26591.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248456|gb|EGA32390.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251329|gb|EGA35201.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323259257|gb|EGA42900.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262142|gb|EGA45704.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323264846|gb|EGA48347.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323272317|gb|EGA55724.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 302 Score = 39.7 bits (91), Expect = 0.62, Method: Compositional matrix adjust. Identities = 48/234 (20%), Positives = 88/234 (37%), Gaps = 6/234 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 S L I K G + G V F+ G+ D+ A+ A+ + P +++ Sbjct: 30 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T L R+ AF + G + K I Sbjct: 90 LIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQA--AFSDTIFVVGTRLLTKKGGDIKD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L G ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 148 FPDLKGKAVVVTSGTTSEILLHKLNEEQKMGMRIISAKDHGDSFRTLESGRAVAFMMDDA 207 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 L + +P I+ S+ + + D E+ ++ T T+ E Sbjct: 208 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKNDPEFKKLMDDTIAQAQTSGE 261 >gi|295692447|ref|YP_003601057.1| glutamine ABC transporter, glutamine-binding protein [Lactobacillus crispatus ST1] gi|295030553|emb|CBL50032.1| Glutamine ABC transporter, glutamine-binding protein [Lactobacillus crispatus ST1] Length = 272 Score = 39.7 bits (91), Expect = 0.63, Method: Compositional matrix adjust. Identities = 39/196 (19%), Positives = 81/196 (41%), Gaps = 10/196 (5%) Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 +T L G +K G +GF++D +AL+ + +K ++ A R L++ +D + Sbjct: 48 DTRLFGLTNIKT-GHIEGFEIDLAKALTKQMLGKDAKTDFVTTTANTRIPLLKNGNVDAV 106 Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 T+ E + + F + G ++ I +V L G ++ GTT Sbjct: 107 L--ATMTITPERAKQVTFSKPYFPAGSSLLVPNNSKIKNVKDLEGKTVLAVKGTTA---- 160 Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220 D + K + ++ + +A +A++ A T D L + N + ++ + Sbjct: 161 VDDVHKYAPKARILQYDDYGQAMSALKANQGVALTTDNGLLAGIAQEN---PGYKLVGGV 217 Query: 221 ISKSPLAPAIIQGDTE 236 S +P A+ +G + Sbjct: 218 YSNAPYGIAVNKGQKQ 233 >gi|292487797|ref|YP_003530672.1| arginine ABC transporter periplasmic protein [Erwinia amylovora CFBP1430] gi|291553219|emb|CBA20264.1| Arginine ABC transport system, periplasmic component [Erwinia amylovora CFBP1430] gi|312171916|emb|CBX80173.1| Arginine ABC transport system, periplasmic component [Erwinia amylovora ATCC BAA-2158] Length = 243 Score = 39.7 bits (91), Expect = 0.63, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 65/160 (40%), Gaps = 20/160 (12%) Query: 47 FAEVKANGDWKGFDVDFCRALSSAI-----FDDPSKIQYLPLNAKERFLALQSKQIDILS 101 F + AN +GFDVD AL I F + + +P RF A+ S +DI Sbjct: 34 FEFIDANNKIQGFDVDLANALCREIDADCTFTNQAFDSLIPSLKFRRFDAVMSG-MDITP 92 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 L + Y+D + +K ++SV L G + VQ GTT + +A Sbjct: 93 EREKQVLFTQ----------AYYDNSALFITQKGKVASVDALKGKRVGVQNGTTHQKYIA 142 Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 + K +K P ++ + + R DA GD + + Sbjct: 143 E--KLPEVKVVP--YDSYQNAILDLKNGRLDAVFGDTAVV 178 >gi|237729705|ref|ZP_04560186.1| predicted protein [Citrobacter sp. 30_2] gi|226908311|gb|EEH94229.1| predicted protein [Citrobacter sp. 30_2] Length = 350 Score = 39.7 bits (91), Expect = 0.63, Method: Compositional matrix adjust. Identities = 26/105 (24%), Positives = 53/105 (50%), Gaps = 14/105 (13%) Query: 58 GFDVDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR--- 110 G+ +D C ++ SA+ K++++ N+ +F+ +++ DI+ ++ R Sbjct: 106 GYSIDICNSIVSALKTKLQLKNLKVEWVKANSASQFVLIKNHMADIMCIPAFYSKSRHSI 165 Query: 111 -EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 E SL YF F+M K + ++++LSG S+ V++GT Sbjct: 166 SEFSLPF------YFSSTRFVMRKNESNDNLAELSGHSVLVKSGT 204 >gi|168240514|ref|ZP_02665446.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194450029|ref|YP_002044700.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194408333|gb|ACF68552.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|205339899|gb|EDZ26663.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 302 Score = 39.7 bits (91), Expect = 0.63, Method: Compositional matrix adjust. Identities = 48/234 (20%), Positives = 88/234 (37%), Gaps = 6/234 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 S L I K G + G V F+ G+ D+ A+ A+ + P +++ Sbjct: 30 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T L R+ AF + G + K I Sbjct: 90 LIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQA--AFSDTIFVVGTRLLTKKGGDIKD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L G ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 148 FPDLKGKAVVVTSGTTSEILLHKLNEEQKMGMRIISAKDHGDSFRTLESGRAVAFMMDDA 207 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 L + +P I+ S+ + + D E+ ++ T T+ E Sbjct: 208 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKNDPEFKKLMDDTIAQAQTSGE 261 >gi|160895520|ref|YP_001561102.1| extracellular solute-binding protein [Delftia acidovorans SPH-1] gi|160361104|gb|ABX32717.1| extracellular solute-binding protein family 3 [Delftia acidovorans SPH-1] Length = 293 Score = 39.7 bits (91), Expect = 0.63, Method: Compositional matrix adjust. Identities = 46/200 (23%), Positives = 83/200 (41%), Gaps = 20/200 (10%) Query: 53 NGDWKGFDVDFCRALSSAI---FDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 NG G V+ +A++ A+ + P K+Q+ + ++ R L + ID+ +T Sbjct: 50 NGKPIGMTVEMSQAVAEAVKKAVNRPDLKVQWQAVTSQNRMPLLANGTIDLECGSTTNNT 109 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL--ADYFKA 166 +R + A ++ G ++ K GI + + L ++ + GTT L A+ KA Sbjct: 110 VRGKEVAFAIN--HFYTGTRLLVKKSSGIKNYADLKDKTVAITTGTTNLQVLRKANADKA 167 Query: 167 HNM-----KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221 M K H F VE R A+ D L+ L T P + ++ D + Sbjct: 168 WGMNIVMAKDHADGFLLVEN-------DRAAAFGMDDILLFGLIPTAKNPGDFEVVADSL 220 Query: 222 SKSPLAPAIIQGDTEWYNIV 241 P A + + D ++ +V Sbjct: 221 QVEPYACMLRKDDPQFKQLV 240 >gi|104774237|ref|YP_619217.1| glutamine-binding protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103423318|emb|CAI98159.1| Glutamine-binding protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 292 Score = 39.7 bits (91), Expect = 0.63, Method: Compositional matrix adjust. Identities = 45/204 (22%), Positives = 83/204 (40%), Gaps = 12/204 (5%) Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 +T L G +K G +GF++D A++ I SK + P+ K R L + +D + Sbjct: 60 DTKLFGLTNIK-TGKIEGFEIDLATAITKQILGPKSKAVFRPITEKTRITLLHNGSLDAV 118 Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQA--GTTTEL 158 + T+ +E + F + + + I+ K I S++ L+ + V A GT Sbjct: 119 I--STMTITKERMKVIDFSDVYFNANESMIVKKSSKIRSIADLNKKGVVVIAIKGTDVAN 176 Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218 +A ++K F+ A +A + D D L L D P E + Sbjct: 177 QVAKLASKASVKQ----FDDYGSAFNALKAGQGDVMIDDNGILAG--LIADTP-EFTLTK 229 Query: 219 DIISKSPLAPAIIQGDTEWYNIVS 242 +++ P + +G TE ++ Sbjct: 230 ASLAEEPYGIGVEKGQTEMRQAIN 253 >gi|306812688|ref|ZP_07446881.1| arginine transporter subunit ; periplasmic-binding component of ABC superfamily protein [Escherichia coli NC101] gi|305853451|gb|EFM53890.1| arginine transporter subunit ; periplasmic-binding component of ABC superfamily protein [Escherichia coli NC101] Length = 243 Score = 39.7 bits (91), Expect = 0.64, Method: Compositional matrix adjust. Identities = 48/203 (23%), Positives = 82/203 (40%), Gaps = 34/203 (16%) Query: 47 FAEVKANGDWKGFDVDFCRALSSAI-----FDDPSKIQYLPLNAKERFLALQSKQIDILS 101 F + AN GFDVD +AL I F + +P +L+ ++++ + Sbjct: 34 FESIDANNQIVGFDVDLAQALCKEIDATCTFSNQVFDSLIP--------SLKFRRVEAVM 85 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 D T RE + L P Y+D + ++ +SV QL G + VQ GTT + + Sbjct: 86 AGMDITPEREKQV-LFTTP--YYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFI- 141 Query: 162 DYFKAHNMKYHP----IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 M HP + ++ + + R D+ GD + + + D P + Sbjct: 142 -------MDKHPEITTVPYDSYQNAKLDLQNGRIDSVFGDTAVV--TEWLKDNPKLAAVG 192 Query: 218 PDIISK----SPLAPAIIQGDTE 236 + K + L A+ QG+TE Sbjct: 193 DKVTDKDYFGTGLGIAVRQGNTE 215 >gi|227888779|ref|ZP_04006584.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus johnsonii ATCC 33200] gi|227850616|gb|EEJ60702.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus johnsonii ATCC 33200] Length = 263 Score = 39.7 bits (91), Expect = 0.64, Method: Compositional matrix adjust. Identities = 37/147 (25%), Positives = 64/147 (43%), Gaps = 5/147 (3%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 IK RG L G++ V + NG GFDVD +A+ I P Q + + KE Sbjct: 34 IKSRGTLVIGVDDSFVPMDFRQKNGKLVGFDVDLAKAVCKEIGLKPD-FQTIDWSMKE-- 90 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 L++ I+++ +T + + +AF + Q + K +GI++ Q+ + Sbjct: 91 TELRNGTINVIWNG--YTKTKARAKKVAFSKPYLENDQILVTRKNEGINNYRQMRWKILG 148 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVF 176 VQ G++ L +Y K + V Sbjct: 149 VQTGSSGADDLDNYPKVLKKRVKSTVL 175 >gi|167990674|ref|ZP_02571774.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205331024|gb|EDZ17788.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] Length = 302 Score = 39.7 bits (91), Expect = 0.64, Method: Compositional matrix adjust. Identities = 35/150 (23%), Positives = 60/150 (40%), Gaps = 6/150 (4%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 S L I K G + G V F+ G+ D+ A+ A+ + P +++ Sbjct: 30 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T L R+ AF + G + K I Sbjct: 90 LIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQA--AFSDTIFVVGTRLLTKKGGDIKD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNM 169 L G ++ V +GTT+E+ L + M Sbjct: 148 FPDLKGKAVVVTSGTTSEILLHKLNEEQKM 177 >gi|261245937|emb|CBG23739.1| ABC transporter periplasmic binding protein (glutamate/aspartate?) [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267992399|gb|ACY87284.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157265|emb|CBW16753.1| ABC transporter periplasmic binding protein (glutamate/aspartate?) [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|323128982|gb|ADX16412.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] Length = 308 Score = 39.7 bits (91), Expect = 0.65, Method: Compositional matrix adjust. Identities = 35/150 (23%), Positives = 60/150 (40%), Gaps = 6/150 (4%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 S L I K G + G V F+ G+ D+ A+ A+ + P +++ Sbjct: 36 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 95 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T L R+ AF + G + K I Sbjct: 96 LIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQA--AFSDTIFVVGTRLLTKKGGDIKD 153 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNM 169 L G ++ V +GTT+E+ L + M Sbjct: 154 FPDLKGKAVVVTSGTTSEILLHKLNEEQKM 183 >gi|260597072|ref|YP_003209643.1| glutamate and aspartate transporter subunit [Cronobacter turicensis z3032] gi|260216249|emb|CBA29167.1| Glutamate/aspartate periplasmic-binding protein [Cronobacter turicensis z3032] Length = 314 Score = 39.7 bits (91), Expect = 0.65, Method: Compositional matrix adjust. Identities = 35/144 (24%), Positives = 60/144 (41%), Gaps = 6/144 (4%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS- 76 S S L IK G + G V F+ G+ D+ A+ A+ + P Sbjct: 39 SGGQSTLDKIKANGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKQLNKPDL 98 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 +++ +P+ ++ R LQ+ D +T L R+ AF + G ++ K Sbjct: 99 QVKMIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQA--AFSDTIFVVGTRLLVKKGGP 156 Query: 137 ISSVSQLSGASICVQAGTTTELTL 160 I L G ++ V +GTT+E+ L Sbjct: 157 IKDFPDLKGKAVVVTSGTTSEVLL 180 >gi|170700094|ref|ZP_02891116.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] gi|170135008|gb|EDT03314.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] Length = 298 Score = 39.7 bits (91), Expect = 0.65, Method: Compositional matrix adjust. Identities = 45/198 (22%), Positives = 77/198 (38%), Gaps = 14/198 (7%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD-------PS-KI 78 L IK G + GI V F+ D + ++ + R +++ I D P+ + Sbjct: 29 LKKIKDTGIVSLGIRESSVPFSY----SDNQQKNIGYSRDIAARIIDALKAELKAPNLTV 84 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + +P+ ++ R LQ+ ID +T TL R+ AF + G F K G+ Sbjct: 85 KEIPITSQNRIPLLQNGTIDFECGSTTNTLERQKQA--AFSNSIFLYGIRFSTRKDSGVK 142 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + L+G ++ AGT+ E L + M I + E R A+ D Sbjct: 143 DFTDLAGKTVATTAGTSDERLLRKLNEEKGMNMTIISAKDHAEAFMNVTTGRAVAFVMDE 202 Query: 199 SALYALKLTNDRPSEHVI 216 LY + P + + Sbjct: 203 PLLYGEIAKDRNPGAYTV 220 >gi|204930506|ref|ZP_03221436.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204320440|gb|EDZ05643.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 302 Score = 39.7 bits (91), Expect = 0.65, Method: Compositional matrix adjust. Identities = 35/150 (23%), Positives = 60/150 (40%), Gaps = 6/150 (4%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 S L I K G + G V F+ G+ D+ A+ A+ + P +++ Sbjct: 30 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T L R+ AF + G + K I Sbjct: 90 LIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQA--AFSDTIFVVGTRLLTKKGGDIKD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNM 169 L G ++ V +GTT+E+ L + M Sbjct: 148 FPDLKGKAVVVTSGTTSEILLHKLNEEQKM 177 >gi|303247503|ref|ZP_07333775.1| extracellular solute-binding protein family 3 [Desulfovibrio fructosovorans JJ] gi|302491199|gb|EFL51091.1| extracellular solute-binding protein family 3 [Desulfovibrio fructosovorans JJ] Length = 250 Score = 39.7 bits (91), Expect = 0.65, Method: Compositional matrix adjust. Identities = 33/144 (22%), Positives = 67/144 (46%), Gaps = 8/144 (5%) Query: 39 GINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQID 98 GI+ G F V +G GFDV+ ++ + K+++ P++ AL +K+ID Sbjct: 33 GIDFGFPPFGYVDKDGKPTGFDVESLNWIAKKM---GFKVKHQPMDWDGIIPALLAKKID 89 Query: 99 ILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTT 156 I++ T R + + I Y++ ++ +K ++++++ SG I VQ GT T Sbjct: 90 IVASGMSATAERAKKVDFS---IPYYEVTQVLLVPEKDKTTLAEMLKSGKKIGVQRGTVT 146 Query: 157 ELTLADYFKAHNMKYHPIVFERVE 180 L + K+ + ++ + Sbjct: 147 AKLLEELVTKPGYKFEVVPYDSTD 170 >gi|311898732|dbj|BAJ31140.1| putative glutamate ABC transporter substrate-binding protein [Kitasatospora setae KM-6054] Length = 303 Score = 39.7 bits (91), Expect = 0.66, Method: Compositional matrix adjust. Identities = 37/160 (23%), Positives = 72/160 (45%), Gaps = 9/160 (5%) Query: 31 KKRGFLKCGINTG--LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 K RG L G + +GF +V+ G GFD++ + +++ + +I++ +N+ R Sbjct: 63 KTRGKLVVGAKSDQPFLGFEDVQ-TGKRNGFDIEIAKMVAADLGFSADQIEFKTINSSAR 121 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGAS 147 +L QID T R+ + F Y GQ +++K I+ + Sbjct: 122 ETSLSGDQIDYYVGTYSITPKRKEQID--FAGPYYIAGQSLLVNKDNTAITGPETTKDKA 179 Query: 148 ICVQAGTTTELTLADY-FKAHNMKYHPIVFERV--EEIDA 184 +C AG+T+ + Y K + + + E++ +E+DA Sbjct: 180 VCTAAGSTSVAGIQKYGAKVTTFESYSLCVEKLLTKEVDA 219 >gi|270159600|ref|ZP_06188256.1| extracellular solute-binding family protein [Legionella longbeachae D-4968] gi|289165609|ref|YP_003455747.1| amino acid (glutamine) ABC transporter, periplasmic amino acid binding protein [Legionella longbeachae NSW150] gi|269987939|gb|EEZ94194.1| extracellular solute-binding family protein [Legionella longbeachae D-4968] gi|288858782|emb|CBJ12687.1| amino acid (glutamine) ABC transporter, periplasmic amino acid binding protein [Legionella longbeachae NSW150] Length = 250 Score = 39.7 bits (91), Expect = 0.66, Method: Compositional matrix adjust. Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 7/108 (6%) Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL-ALQSKQIDILSRNTDWTLLREI 112 G+ KGFD+D R ++ + K+ Y L AL Q+D + + T+ ++ Sbjct: 48 GEIKGFDIDLARLIAKKL----GKVAYFDAMQFSGILPALSLGQVD--AAISTITITKQR 101 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 + F YF+ + ++K I S +L+ I VQ GTT E+ L Sbjct: 102 NKNFDFTEPYYFESMAAVFPQEKPIKSAKELTDKKIAVQLGTTMEIWL 149 >gi|241765002|ref|ZP_04762998.1| extracellular solute-binding protein family 3 [Acidovorax delafieldii 2AN] gi|241365399|gb|EER60192.1| extracellular solute-binding protein family 3 [Acidovorax delafieldii 2AN] Length = 297 Score = 39.7 bits (91), Expect = 0.66, Method: Compositional matrix adjust. Identities = 54/257 (21%), Positives = 97/257 (37%), Gaps = 25/257 (9%) Query: 12 LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSA 70 L L S + ++L + G L V F+ + +G G+ +D C L+ Sbjct: 12 LAALCGVSAVSAQTVLEKVSAGGALVIAHRESSVPFSYIDPKSGKPIGYAIDLCLRLADV 71 Query: 71 IF------DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 + D P ++ L + A R ++ + D+ +T T E +AF Y Sbjct: 72 VRKKTGMKDMP--VEMLQVTAANRLAMVEQHKADLECGST--TNNAERRQKVAFTVPHYI 127 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY-------HPIVFE 177 G ++ I + L+G + GTT ++H M H E Sbjct: 128 TGARLLVKASSSIDRLEDLAGKKLVSTKGTTPLKAAEQANRSHLMGITIVEAPDHERGVE 187 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 VE+ +A DA+ D LY L P+ ++ ++ PLA + + D E+ Sbjct: 188 MVEKGEA-------DAFLMDDVLLYGLAAGRPHPAALKVVGRFVTTEPLAIVLPKNDPEF 240 Query: 238 YNIVSWTHYAMVTAEEL 254 +V ++T+ E+ Sbjct: 241 KKLVDDEMRRLITSREI 257 >gi|292899027|ref|YP_003538396.1| arginine ABC transporter substrate-binding protein [Erwinia amylovora ATCC 49946] gi|291198875|emb|CBJ45985.1| arginine ABC transporter, substrate-binding protein [Erwinia amylovora ATCC 49946] Length = 248 Score = 39.7 bits (91), Expect = 0.67, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 65/160 (40%), Gaps = 20/160 (12%) Query: 47 FAEVKANGDWKGFDVDFCRALSSAI-----FDDPSKIQYLPLNAKERFLALQSKQIDILS 101 F + AN +GFDVD AL I F + + +P RF A+ S +DI Sbjct: 39 FEFIDANNKIQGFDVDLANALCREIDADCTFTNQAFDSLIPSLKFRRFDAVMSG-MDITP 97 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 L + Y+D + +K ++SV L G + VQ GTT + +A Sbjct: 98 EREKQVLFTQ----------AYYDNSALFITQKGKVASVDALKGKRVGVQNGTTHQKYIA 147 Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 + K +K P ++ + + R DA GD + + Sbjct: 148 E--KLPEVKVVP--YDSYQNAILDLKNGRLDAVFGDTAVV 183 >gi|239983304|ref|ZP_04705828.1| glutamate binding periplasmic protein [Streptomyces albus J1074] gi|291455131|ref|ZP_06594521.1| glutamate binding periplasmic protein [Streptomyces albus J1074] gi|291358080|gb|EFE84982.1| glutamate binding periplasmic protein [Streptomyces albus J1074] Length = 312 Score = 39.7 bits (91), Expect = 0.68, Method: Compositional matrix adjust. Identities = 49/211 (23%), Positives = 89/211 (42%), Gaps = 20/211 (9%) Query: 31 KKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 K RG L G E A G + GFD++ + + + + +++++ + + R Sbjct: 68 KARGALVVGAKEDQPYLGEKDPAGGGYTGFDIEIAKMVGAHLGFAENRVRFTTIASANRE 127 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASI 148 ALQ+ QID +T+ + F Y GQG ++ ++ I L G + Sbjct: 128 TALQNGQIDYYVGT--YTINDNRKRLVGFAGPYYVAGQGLLVRSDEEDIKGPEDLDGKRV 185 Query: 149 CVQAGTTT-ELTLADYFKAHNMKY--HPIVFERVEEIDAAYRAHRCDAYTGDISAL--YA 203 C AG+T + +Y KA + Y + I + + ++ DA T D + L YA Sbjct: 186 CSAAGSTPYQRMQEEYPKAVLVSYDTYSICVDNL-------LTYQVDAVTTDDAILLGYA 238 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 K+ P E ++ S+ P +++ D Sbjct: 239 AKV----PEELKVVGKPFSEEPYGIGVLRSD 265 >gi|149912069|ref|ZP_01900660.1| Putative amino acid ABC transporter, periplasmic amino acid-bindingportion [Moritella sp. PE36] gi|149804865|gb|EDM64902.1| Putative amino acid ABC transporter, periplasmic amino acid-bindingportion [Moritella sp. PE36] Length = 250 Score = 39.7 bits (91), Expect = 0.68, Method: Compositional matrix adjust. Identities = 41/177 (23%), Positives = 77/177 (43%), Gaps = 13/177 (7%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 +K G++ F K N +GF+VD ++ + SK++++ +N F L++ Sbjct: 26 IKVGMSGNYFPFTFSK-NDQLQGFEVDLWEEIAKR---NDSKVEFITVNFSGLFGMLETG 81 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGT 154 +ID +S T R + AF +DG ++ K I+ +S L+ ++ V G+ Sbjct: 82 RIDTISNQVTITPAR--TAKYAFSQTYVYDGAQVVVKKGNTEINGISDLANKTVGVNLGS 139 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 AD + ++ + + I+ R DA+ D L +L+L N P Sbjct: 140 ----NFADLLRKYDTNNNITIKTYDTGIERDVALGRTDAFVMD--RLSSLELINKSP 190 >gi|62179263|ref|YP_215680.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|224582500|ref|YP_002636298.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|62126896|gb|AAX64599.1| ABC superfamily (bind_prot), glutamate/aspartate transporter [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|224467027|gb|ACN44857.1| ABC transporter periplasmic binding protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|322713729|gb|EFZ05300.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 308 Score = 39.7 bits (91), Expect = 0.68, Method: Compositional matrix adjust. Identities = 48/234 (20%), Positives = 88/234 (37%), Gaps = 6/234 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 S L I K G + G V F+ G+ D+ A+ A+ + P +++ Sbjct: 36 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 95 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T L R+ AF + G + K I Sbjct: 96 LIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQA--AFSDTIFVVGTRLLTKKGGDIKD 153 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L G ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 154 FPDLRGKAVVVTSGTTSEILLHKLNEEQKMGMRIISAKDHGDSFRTLESGRAVAFMMDDA 213 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 L + +P I+ S+ + + D E+ ++ T T+ E Sbjct: 214 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKNDPEFKKLMDDTIAQAQTSGE 267 >gi|325274871|ref|ZP_08140884.1| extracellular solute-binding protein [Pseudomonas sp. TJI-51] gi|324099988|gb|EGB97821.1| extracellular solute-binding protein [Pseudomonas sp. TJI-51] Length = 266 Score = 39.7 bits (91), Expect = 0.69, Method: Compositional matrix adjust. Identities = 52/246 (21%), Positives = 100/246 (40%), Gaps = 14/246 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + +L + + A + D KRG L+ G++ + F G+ GF+ Sbjct: 1 MIKKYLSRLLVGVTALVAVTAAQAGAIDDAVKRGTLRVGMDPTYMPFQMTNKRGEIIGFE 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A++ ++ K + + AL + + D++ + TL +E +L L F Sbjct: 61 VDILKAMAKSM---GVKFEAVSTAYDGIIPALLTGKFDMIG--SGMTLTQERNLRLNFSE 115 Query: 121 ITYFDGQGFIMHKKKG--ISSVSQLSGAS--ICVQAGTTTELTLADYFKAHNMKYHPIVF 176 GQ ++ K+ I S L+ + + GTT E+ KYH Sbjct: 116 PFIVVGQTLLIRKELAGEIKSYKDLNNEKYRLTSKLGTTGEMVSKKLI--GKAKYHGYDN 173 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E+ +D + DA+ D + + + + + L + + PLA + +GD + Sbjct: 174 EQEAVMDVV--NGKADAFVYD-APYNVVAVDKAGAGKLLFLEEPFTYEPLAFGLKKGDYD 230 Query: 237 WYNIVS 242 N ++ Sbjct: 231 SINFIN 236 >gi|304386276|ref|ZP_07368609.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Pediococcus acidilactici DSM 20284] gi|304327633|gb|EFL94860.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Pediococcus acidilactici DSM 20284] Length = 277 Score = 39.7 bits (91), Expect = 0.70, Method: Compositional matrix adjust. Identities = 43/195 (22%), Positives = 83/195 (42%), Gaps = 14/195 (7%) Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 +T L G +VK + KGFD+D +AL+ + ++ +++ + ++ R L++ +D + Sbjct: 51 DTKLFGLMDVK-DSQIKGFDIDIAKALTKQMLGKDARAEFVQVTSQTRIPLLKNGNLDAV 109 Query: 101 SRNTDWTLLREISLGLAFRPITYFD-GQGFIMHKKKGISSVSQLS--GASICVQAGTTTE 157 T R+ + + +YFD GQ ++ K I SV L+ G + G + Sbjct: 110 IATMTITKDRQKVVDFS---DSYFDAGQSLLVPKDSKIHSVKDLNHPGTKVIGVVGANS- 165 Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 K K I + + A ++ + A T D L+ + + N + ++ Sbjct: 166 ---VSNVKKFAPKAQVIQLQDYAQALTALKSGQGAALTTDNGILFGMAVDN---PQFKVV 219 Query: 218 PDIISKSPLAPAIIQ 232 +K P AI Q Sbjct: 220 GKAFTKEPYGIAINQ 234 >gi|300811731|ref|ZP_07092205.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497307|gb|EFK32355.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 286 Score = 39.7 bits (91), Expect = 0.71, Method: Compositional matrix adjust. Identities = 45/204 (22%), Positives = 83/204 (40%), Gaps = 12/204 (5%) Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 +T L G +K G +GF++D A++ I SK + P+ K R L + +D + Sbjct: 54 DTKLFGLTNIK-TGKIEGFEIDLATAITKQILGPKSKAVFRPITEKTRITLLHNGSLDAV 112 Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQA--GTTTEL 158 + T+ +E + F + + + I+ K I S++ L+ + V A GT Sbjct: 113 I--STMTITKERMKVIDFSDVYFNANESMIVKKSSKIRSIADLNKKGVVVIAIKGTDVAN 170 Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218 +A ++K F+ A +A + D D L L D P E + Sbjct: 171 QVAKLASKASVKQ----FDDYGSAFNALKAGQGDVMIDDNGILAG--LIADTP-EFTLTK 223 Query: 219 DIISKSPLAPAIIQGDTEWYNIVS 242 +++ P + +G TE ++ Sbjct: 224 ASLAEEPYGIGVEKGQTEMRQAIN 247 >gi|119719815|ref|YP_920310.1| extracellular solute-binding protein [Thermofilum pendens Hrk 5] gi|119524935|gb|ABL78307.1| extracellular solute-binding protein, family 3 [Thermofilum pendens Hrk 5] Length = 279 Score = 39.7 bits (91), Expect = 0.71, Method: Compositional matrix adjust. Identities = 39/164 (23%), Positives = 69/164 (42%), Gaps = 18/164 (10%) Query: 6 FVSILCLIILFFTSF----------STNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 F+++ + +L TS + S + IK RG L G + F V NG+ Sbjct: 14 FLAVFAVGLLLGTSLGYFLWHSASTTQTVSYVDKIKARGKLIVGTSADWPPFEYVDKNGN 73 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + G D++ + ++ + +++ + AL++ +DI+ + T RE + Sbjct: 74 YAGIDIEIAKRIAQEL---GVQLEIKDMKFAALIEALKNGDVDIVIADMTPTAEREKVVD 130 Query: 116 LAFRPITYFDGQGF--IMHKKKGISSVSQLSGASICVQAGTTTE 157 + I Y+ +G+ I K I S L G I VQ GT E Sbjct: 131 FS---IPYYTSKGYAVITTAKSDIKSEQDLYGKKIGVQLGTIQE 171 >gi|115358741|ref|YP_775879.1| extracellular solute-binding protein [Burkholderia ambifaria AMMD] gi|115284029|gb|ABI89545.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia ambifaria AMMD] Length = 298 Score = 39.7 bits (91), Expect = 0.72, Method: Compositional matrix adjust. Identities = 45/198 (22%), Positives = 77/198 (38%), Gaps = 14/198 (7%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD-------PS-KI 78 L IK G + GI V F+ D + ++ + R +++ I D P+ + Sbjct: 29 LKKIKDTGIVSLGIRESSVPFSY----SDNQQKNIGYSRDIAARIIDALKAELKAPNLTV 84 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + +P+ ++ R LQ+ ID +T TL R+ AF + G F K G+ Sbjct: 85 KEIPITSQNRIPLLQNGTIDFECGSTTNTLERQKQA--AFSNSIFLYGIRFSTRKDSGVK 142 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + L+G ++ AGT+ E L + M I + E R A+ D Sbjct: 143 DFADLAGKTVATTAGTSDERLLRKLNEEKGMNMTIISAKDHAEAFMNVTTGRAVAFVMDE 202 Query: 199 SALYALKLTNDRPSEHVI 216 LY + P + + Sbjct: 203 PLLYGEIAKDRNPGAYTV 220 >gi|62179452|ref|YP_215869.1| arginine ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62127085|gb|AAX64788.1| ABC superfamily (bind_prot), arginine transport system [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322713921|gb|EFZ05492.1| arginine ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 266 Score = 39.7 bits (91), Expect = 0.72, Method: Compositional matrix adjust. Identities = 47/197 (23%), Positives = 80/197 (40%), Gaps = 22/197 (11%) Query: 47 FAEVKANGDWKGFDVDFCRAL-----SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101 F + AN GFDVD AL +S F + + +P +L+ ++ D + Sbjct: 57 FESMDANNKIVGFDVDLANALCKEIDASCTFTNQAFDSLIP--------SLKFRRFDAVM 108 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 D T RE + L P Y+D + ++ +SV QL G + VQ GTT + + Sbjct: 109 AGMDITPEREKQV-LFTTP--YYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFIM 165 Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPD 219 D + + + ++ + + R DA GD + + N + P + Sbjct: 166 D----KHQEITTVPYDSYQNAKLDLQNGRIDAVFGDTAVVTEWLKANPKLAPVGDKVTDK 221 Query: 220 IISKSPLAPAIIQGDTE 236 + L A+ QG+TE Sbjct: 222 DYFGTGLGIAVRQGNTE 238 >gi|331672402|ref|ZP_08373193.1| arginine-binding periplasmic protein 1 [Escherichia coli TA280] gi|331070597|gb|EGI41961.1| arginine-binding periplasmic protein 1 [Escherichia coli TA280] Length = 243 Score = 39.7 bits (91), Expect = 0.73, Method: Compositional matrix adjust. Identities = 47/203 (23%), Positives = 83/203 (40%), Gaps = 34/203 (16%) Query: 47 FAEVKANGDWKGFDVDFCRALSSAI-----FDDPSKIQYLPLNAKERFLALQSKQIDILS 101 F + AN GFDVD +AL I F + + +P +L+ ++++ + Sbjct: 34 FESIDANNQIVGFDVDLAQALCKEIDATCTFSNQAFDSLIP--------SLKFRRVEAVM 85 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 D T RE + L P Y+D + ++ +SV QL G + VQ GTT + + Sbjct: 86 AGMDITPEREKQV-LFTTP--YYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFI- 141 Query: 162 DYFKAHNMKYHP----IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 M HP + ++ + + R D+ GD + + + D P + Sbjct: 142 -------MDKHPEITTVPYDSYQNAKLDLQNGRIDSVFGDTAVV--TEWLKDNPKLAAVG 192 Query: 218 PDIISK----SPLAPAIIQGDTE 236 + K + L A+ QG++E Sbjct: 193 DKVTDKDYFGTGLGIAVRQGNSE 215 >gi|119946083|ref|YP_943763.1| glutamine ABC transporter extracellular solute-binding family 3 protein [Psychromonas ingrahamii 37] gi|119864687|gb|ABM04164.1| ABC glutamine transporter extracellular solute-binding protein, family 3 [Psychromonas ingrahamii 37] Length = 263 Score = 39.7 bits (91), Expect = 0.73, Method: Compositional matrix adjust. Identities = 35/155 (22%), Positives = 70/155 (45%), Gaps = 9/155 (5%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 ++ ++L FT S A+ L IKK G L+ + F V + +G+D+D L Sbjct: 9 NVFTSLLLVFTIHSAQANQLESIKKAGVLRVAVPQDFPPFGSVGTDFKPQGYDIDMAAYL 68 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE--ISLGLAFRPITYFD 125 + + +++ + + + R LQ++++D++ + RE I A+ P +F Sbjct: 69 ADEL---NVELELVAVTSANRIPYLQTRKVDLVISSLGKNPEREAVIDFSSAYAP--FF- 122 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 G + +SS + L ++ V G+ +L L Sbjct: 123 -LGVFGTDNEMVSSPADLKNKTVGVTRGSVEDLEL 156 >gi|24379607|ref|NP_721562.1| putative ABC transporter, glutamine binding protein [Streptococcus mutans UA159] gi|290580393|ref|YP_003484785.1| putative ABC transporter glutamine binding protein [Streptococcus mutans NN2025] gi|24377556|gb|AAN58868.1|AE014954_7 putative ABC transporter, glutamine binding protein [Streptococcus mutans UA159] gi|254997292|dbj|BAH87893.1| putative ABC transporter glutamine binding protein [Streptococcus mutans NN2025] Length = 277 Score = 39.7 bits (91), Expect = 0.73, Method: Compositional matrix adjust. Identities = 28/112 (25%), Positives = 61/112 (54%), Gaps = 9/112 (8%) Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDDPS-KIQYLPLNAKERFLALQSKQIDILSRN 103 +GF + NG GFD+D L++A+F++ K+++ P+N + L++ +ID++ Sbjct: 53 MGFKD--KNGKNVGFDID----LANAVFNEYGIKVKWQPINWDLKETELKNGKIDLIWNG 106 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 ++ RE + ++F + Q + K GI+S + + G ++ Q+G++ Sbjct: 107 --YSKTRERARKVSFTKPYMKNDQVLVTKKSSGITSFADMKGKALGAQSGSS 156 >gi|110633915|ref|YP_674123.1| extracellular solute-binding protein [Mesorhizobium sp. BNC1] gi|110284899|gb|ABG62958.1| amino acid ABC transporter substrate-binding protein, PAAT family [Chelativorans sp. BNC1] Length = 261 Score = 39.7 bits (91), Expect = 0.74, Method: Compositional matrix adjust. Identities = 42/173 (24%), Positives = 72/173 (41%), Gaps = 11/173 (6%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 ++R LK G F + A+G+ +GFD+D RAL + ++ +++ Sbjct: 26 QERMQLKIGTEGAYPPFNNLTADGNLEGFDIDIARALCEEM---NAECEFVTQEWDGMIP 82 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ--LSGASI 148 ALQ+ + D + + T R+ + F Y ++ K I+ V++ L+G +I Sbjct: 83 ALQAGKFDAIIASMSITDERKQQVD--FTEKYYNTPPAIVVAKDSDIAGVTKEDLAGRTI 140 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 QA TT F+ +K +P EE R DA D+ L Sbjct: 141 GAQASTTHGNFAEATFQESEVKLYPT----AEEYKLDMTNGRLDAVVDDVIVL 189 >gi|330985963|gb|EGH84066.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. lachrymans str. M301315] Length = 266 Score = 39.7 bits (91), Expect = 0.74, Method: Compositional matrix adjust. Identities = 43/176 (24%), Positives = 73/176 (41%), Gaps = 15/176 (8%) Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 KG +V+ + + D + L N R LQ ++D+L N +WT R LG Sbjct: 51 KGVNVELAEDIGKRLGVDVELVSVLTAN---RVQFLQQGKVDLLIANMEWTPERGQLLGS 107 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 P G ++ K I+ L G +C G++ L ++ ++K F Sbjct: 108 VPTPFYRVGGTAAVLKDSK-ITRWEDLKGQPVCTSQGSSYIKALTEF--GADIK----AF 160 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH-VILPDIISKSPLAPAII 231 + E A R + C A D + + L ND ++ I P++ +P AP++I Sbjct: 161 KSSSESLLALRGNNCVAAVHDATLVNPLLAGNDEWKDYRAITPEL---NP-APSVI 212 >gi|299066293|emb|CBJ37477.1| putative cystine transporter subunit; periplasmic-binding component of ABC superfamily (fliY) [Ralstonia solanacearum CMR15] Length = 267 Score = 39.7 bits (91), Expect = 0.74, Method: Compositional matrix adjust. Identities = 31/142 (21%), Positives = 64/142 (45%), Gaps = 13/142 (9%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 +A L +I+K G ++ I F + A+ +G+D+D L+ + K + +P Sbjct: 30 HADALANIQKAGVIRVAIPNDFPPFGSLGADLKLQGYDIDMANLLAKELG---VKAELVP 86 Query: 83 LNAKERFLALQSKQIDI----LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + + R L + ++D+ L +N + + + + A P + + K I Sbjct: 87 VTSTNRIPFLTTGKVDVVISSLGKNAERAKVIDFTQAYAPFPKSVYG------PKDVSIK 140 Query: 139 SVSQLSGASICVQAGTTTELTL 160 + + L+G +I V G+T +L L Sbjct: 141 TPADLAGKTIGVTRGSTEDLAL 162 >gi|291530246|emb|CBK95831.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [Eubacterium siraeum 70/3] Length = 294 Score = 39.7 bits (91), Expect = 0.74, Method: Compositional matrix adjust. Identities = 57/240 (23%), Positives = 99/240 (41%), Gaps = 30/240 (12%) Query: 17 FTSFSTNAS--------------ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 FT+ STNA+ L +IK G + G+ + F V NG+++G+D+ Sbjct: 23 FTACSTNATSGGSDGNTGSKVYRTLDEIKASGKINIGVFSDKNPFGYVDENGEYQGYDIY 82 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 F L D +I Y+ A R L++ ++DI+ N +T+ E + + F + Sbjct: 83 FANRLGK---DLGVEINYVSTEAANRVEYLETGKVDIILAN--FTVTEERAEKVDF-ALP 136 Query: 123 YFD-GQGFIMHKKKGISSVSQLSGAS-ICVQAGTTTELTLA-DYFKAHNMKYHPIVFERV 179 Y + G + I+S+ + V +GTT EL L +Y KY + Sbjct: 137 YMNVALGVVSPDSNVITSLDNWKAEDKMIVISGTTAELYLTKNYPDIKLQKYDSYATAK- 195 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +A A+ D + + A N V + + S+ +APA+ +G+ N Sbjct: 196 ----SAIENGNGVAWANDNTEVIAFAKQN--KGYTVGIDSLGSQDTIAPAVSKGNETLLN 249 >gi|54302943|ref|YP_132936.1| putative amino acid ABC transporter [Photobacterium profundum SS9] gi|46916371|emb|CAG23136.1| putative amino acid ABC transporter [Photobacterium profundum SS9] Length = 269 Score = 39.7 bits (91), Expect = 0.74, Method: Compositional matrix adjust. Identities = 42/174 (24%), Positives = 75/174 (43%), Gaps = 12/174 (6%) Query: 3 KDFFVSILCLIILFF--TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 K + L ++ L + + S L DIK+RG L+ G++T V +A G+ GF+ Sbjct: 2 KKLLAACLAVMTLMMGTNALAAEKSTLIDIKERGTLRVGLST-FVPWAMRDKQGELVGFE 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD R L+ D K++++P AL + + D++ T R +S+ L P Sbjct: 61 VDVARRLAK---DAGLKVEFIPTAWDGIIPALLAGKFDVIIGGLSITPQRNMSV-LFTSP 116 Query: 121 ITYFDGQGFIMHKKKGISSVS----QLSGASICVQAGTTTELTLADYFKAHNMK 170 + G +K+K ++ ++ V+ G T T YF ++ Sbjct: 117 YAH-SGVQLAANKEKSADKLAIADYNKRSVTLSVRRGAFTVETAKKYFPKAKLR 169 >gi|238912473|ref|ZP_04656310.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] Length = 266 Score = 39.7 bits (91), Expect = 0.75, Method: Compositional matrix adjust. Identities = 49/224 (21%), Positives = 91/224 (40%), Gaps = 12/224 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 SF+ + +L +K+RG L G+ F+ +G GF+VDF AL+ + K Sbjct: 27 SFA-DEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVDFAEALAKHL---GVKA 82 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-I 137 P +L +K+ID++ + +R+ + P T Q + +G I Sbjct: 83 SLKPTKWDGILASLDAKRIDVVINQVTISDVRKKKYDFS-TPYTVSGVQALVKKGNEGTI 141 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + + L G + V GT E L + + +++ + + +++ R R DA Sbjct: 142 KTAADLQGKKVGVGLGTNYEEWLRQHVQGVDIRTYDDDPTKYQDL----RVGRIDAIL-- 195 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + L AL L + D S+ A+ +G+ + V Sbjct: 196 VDRLAALDLVKKTKGTLAVTGDAFSRQESGVALRKGNEDLLKAV 239 >gi|110800274|ref|YP_695974.1| amino acid ABC transporter, amino acid-binding protein [Clostridium perfringens ATCC 13124] gi|110674921|gb|ABG83908.1| amino acid ABC transporter, amino acid-binding protein [Clostridium perfringens ATCC 13124] Length = 262 Score = 39.7 bits (91), Expect = 0.75, Method: Compositional matrix adjust. Identities = 47/190 (24%), Positives = 80/190 (42%), Gaps = 11/190 (5%) Query: 39 GINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS-KIQYLPLNAKERFLALQSKQI 97 GI+ V GD GFDVD LS F + K+ + P++ + L + I Sbjct: 38 GIDDTFVPMGFKNEKGDIVGFDVD----LSKEAFKRMNLKVIFQPIDWSMKETELTNGNI 93 Query: 98 DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157 D++ +T+ E +AF + Q + I++++ L G ++ Q G+++ Sbjct: 94 DLIWNG--YTMTHEREKKVAFTNSYLKNRQVIVTLSNSNINTLNDLKGKTVTTQDGSSSL 151 Query: 158 LTLADYFKAHN--MKYHPIVFERVEEIDAAYRAHRCDAYTGD-ISALYALKLTNDRPSEH 214 TL + K P++F+ + A R DA D I A Y + ND H Sbjct: 152 DTLFERPKLTKSFKNGEPVLFDSFNDCFMDLEAGRSDAVVCDEILAQYYI-FKNDPSKFH 210 Query: 215 VILPDIISKS 224 V+ D+ +S Sbjct: 211 VLTEDLGEES 220 >gi|207856130|ref|YP_002242781.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|206707933|emb|CAR32222.1| ABC transporter periplasmic binding protein (glutamate/aspartate?) [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] Length = 308 Score = 39.7 bits (91), Expect = 0.75, Method: Compositional matrix adjust. Identities = 48/234 (20%), Positives = 88/234 (37%), Gaps = 6/234 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 S L I K G + G V F+ G+ D+ A+ A+ + P +++ Sbjct: 36 GSTLDRIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 95 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T L R+ AF + G + K I Sbjct: 96 LIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQA--AFSDTIFVVGTRLLTKKGGDIKD 153 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L G ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 154 FPDLKGKAVVVTSGTTSEILLHKLNEEQKMGMRIISAKDHGDSFRTLESGRAVAFMMDDA 213 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 L + +P I+ S+ + + D E+ ++ T T+ E Sbjct: 214 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKNDPEFKKLMDDTIAQAQTSGE 267 >gi|301157472|emb|CBW16962.1| arginine-binding periplasmic protein 1 precursor [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] Length = 243 Score = 39.3 bits (90), Expect = 0.77, Method: Compositional matrix adjust. Identities = 47/197 (23%), Positives = 80/197 (40%), Gaps = 22/197 (11%) Query: 47 FAEVKANGDWKGFDVDFCRAL-----SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101 F + AN GFDVD AL +S F + + +P +L+ ++ D + Sbjct: 34 FESMDANNKIVGFDVDLANALCKEIDASCTFTNQAFDSLIP--------SLKFRRFDAVM 85 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 D T RE + L P Y+D + ++ +SV QL G + VQ GTT + + Sbjct: 86 AGMDITPEREKQV-LFTTP--YYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFIM 142 Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPD 219 D + + + ++ + + R DA GD + + N + P + Sbjct: 143 DKYP----EITTVPYDSYQNAKLDLQNGRIDAVFGDTAVVTEWLKANPKLAPVGDKVTDK 198 Query: 220 IISKSPLAPAIIQGDTE 236 + L A+ QG+TE Sbjct: 199 DYFGTGLGIAVRQGNTE 215 >gi|152997697|ref|YP_001342532.1| extracellular solute-binding protein [Marinomonas sp. MWYL1] gi|150838621|gb|ABR72597.1| extracellular solute-binding protein family 3 [Marinomonas sp. MWYL1] Length = 268 Score = 39.3 bits (90), Expect = 0.77, Method: Compositional matrix adjust. Identities = 60/250 (24%), Positives = 103/250 (41%), Gaps = 23/250 (9%) Query: 3 KDFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 K F+S L L S S N S L + RG L+ G + F GD G Sbjct: 2 KKIFISALALCSATLASASDNDLWEKSTLNQVLNRGELRVCAEAGYMPFDMRDKKGDIVG 61 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD + ++ A+ K+ AL + + DI+ + T+ E +L + F Sbjct: 62 FDVDIAKTMAKAM---GVKLDIRNTAWDGIIPALLTDKCDIII--SGMTITPERNLKVNF 116 Query: 119 RPITYFDGQGFIMHKK-KG-ISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPI 174 GQ ++ K KG +++ L+ A +I + G T++ + Y + Sbjct: 117 TDPYIVVGQTILLSPKFKGKVTNYRDLNDAKYTIATKLGATSDYAVKRYMSNAKLNLFET 176 Query: 175 VFERVEEIDAAYRAHRCDAYTGDI--SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 E V E+ DA+ D+ +A+Y+ + + V L + + PL AI + Sbjct: 177 ESEGVLEV----VNGNADAFVYDLPYNAIYSAQ----NEGKVVHLDESFTYEPLGFAIRK 228 Query: 233 GDTEWYNIVS 242 GD ++ N ++ Sbjct: 229 GDPDFMNFLN 238 >gi|121610274|ref|YP_998081.1| extracellular solute-binding protein [Verminephrobacter eiseniae EF01-2] gi|121554914|gb|ABM59063.1| extracellular solute-binding protein, family 3 [Verminephrobacter eiseniae EF01-2] Length = 275 Score = 39.3 bits (90), Expect = 0.77, Method: Compositional matrix adjust. Identities = 35/159 (22%), Positives = 68/159 (42%), Gaps = 9/159 (5%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 +F + LC +L + + +A + +IKK+G + G+ + V + G+D D Sbjct: 12 NFATAALCGALLSSHALNASAQSVEEIKKKGTVTIGVLVDFPPYGTVDNSNQPDGYDADV 71 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 + L+ D ++ +P+ R L + ++D+L + T R + + RP Sbjct: 72 AKLLAK---DWGVRLNLVPVTGPNRIPFLLTNKVDLLIASFAPTPERAKQVQFS-RP--- 124 Query: 124 FDGQGFIM--HKKKGISSVSQLSGASICVQAGTTTELTL 160 ++ HKK I + + L G I V +T + L Sbjct: 125 HSAATIVLYGHKKLSIKTPADLKGVRIAVARASTQDTAL 163 >gi|288574034|ref|ZP_06392391.1| extracellular solute-binding protein family 3 [Dethiosulfovibrio peptidovorans DSM 11002] gi|288569775|gb|EFC91332.1| extracellular solute-binding protein family 3 [Dethiosulfovibrio peptidovorans DSM 11002] Length = 257 Score = 39.3 bits (90), Expect = 0.77, Method: Compositional matrix adjust. Identities = 52/241 (21%), Positives = 96/241 (39%), Gaps = 18/241 (7%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGI---NTGLVGFAEVKANGDWKGFDVD 62 F+S + L + S + L DI KRG + + F E +GD GFDVD Sbjct: 13 FISSVFLTVFLSASCAWAGDRLDDIVKRGEMVVAVGDFENEPFFFVE---DGDLVGFDVD 69 Query: 63 FCRALSSAIFDDPS--KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 R ++ I D ++ + L A + + D+ + T+ + + F Sbjct: 70 LGRMIAKEIGVDVRFVRVPWDGLIALAWYSRYPWSRYDMAIASI--TIRQSRTRACDFSD 127 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 ++ GQ ++ ++ G + L G +I V AG+T T ++ +V + + Sbjct: 128 WYFYTGQKLLVREEDGYETPLDLEGKTIAVMAGSTGYET-----AKRDLAAQTVVMDSPQ 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E A RA R D D + + A +R V L +++ + +G+ + + Sbjct: 183 ETVDALRAGRVDGALSDATIVIA---AAERYDGLVALEGMVTTERYGVVLPKGEEDLRKV 239 Query: 241 V 241 V Sbjct: 240 V 240 >gi|167838586|ref|ZP_02465445.1| putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia thailandensis MSMB43] Length = 299 Score = 39.3 bits (90), Expect = 0.77, Method: Compositional matrix adjust. Identities = 39/198 (19%), Positives = 79/198 (39%), Gaps = 14/198 (7%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK--------I 78 L ++ G + G+ V F+ D + + + + ++ I D+ K + Sbjct: 30 LKKVRDTGVVTLGVRESSVPFSYY----DQQQQTIGYSQEIALKIVDEIKKELNRPNLTV 85 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + +P+ ++ R +Q+ +D+ +T T +E + ++F + G I+ K G+ Sbjct: 86 REIPITSQNRIPLVQNGTVDLECGSTTHT--KERANQVSFSNSIFQYGMRLIVKKSSGVK 143 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 L+G ++ AGTT E L + M I + + + R A+ D Sbjct: 144 DFPDLAGKTVATTAGTTEERLLRQWNAEKGMSMQIISAKDHADAFLNVKNGRAVAFFMDE 203 Query: 199 SALYALKLTNDRPSEHVI 216 LY K P ++ I Sbjct: 204 PLLYGAKAKEANPGDYAI 221 >gi|310641776|ref|YP_003946534.1| sulfur-containing amino acid abc transporter, sulfur-containing amino acid-binding protein tcyk [Paenibacillus polymyxa SC2] gi|309246726|gb|ADO56293.1| Sulfur-containing amino acid ABC transporter, sulfur-containing amino acid-binding protein TcyK [Paenibacillus polymyxa SC2] Length = 283 Score = 39.3 bits (90), Expect = 0.78, Method: Compositional matrix adjust. Identities = 36/170 (21%), Positives = 70/170 (41%), Gaps = 16/170 (9%) Query: 6 FVSILCLIILFF-------TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 +S++ +I++ TS ++ +S GD+KK + G T + NG+ G Sbjct: 7 ILSVMAIILVLAGCGSSDDTSSASGSS--GDVKK---IIVGTGTQFKNVCFIDENGNLTG 61 Query: 59 FDVDFCRALSSAIFDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 FDV+ + L + P + ++ ++ L+L + +ID++S + RE Sbjct: 62 FDVELIKELDKRL---PQYEFEFKTMDFGNLLLSLDAGKIDLVSHQMEKNPEREAKYLFN 118 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 P + F + + I S+ L G + + L +Y K H Sbjct: 119 KNPYSIFLNRVAVAKDNNSIHSIDDLKGKKVLTSPTSNAAYVLKEYNKTH 168 >gi|302560614|ref|ZP_07312956.1| sugar-binding protein [Streptomyces griseoflavus Tu4000] gi|302478232|gb|EFL41325.1| sugar-binding protein [Streptomyces griseoflavus Tu4000] Length = 345 Score = 39.3 bits (90), Expect = 0.78, Method: Compositional matrix adjust. Identities = 29/118 (24%), Positives = 52/118 (44%), Gaps = 3/118 (2%) Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 +G +GFD+D ++ I D IQ+ + +R A+Q+ ++D++ R T+ + Sbjct: 114 SGTLEGFDIDLVHRIAEDILGDRDAIQFKAIPTDQRIPAIQAGRVDMVVRT--MTINCDR 171 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNM 169 +AF + GQ + K I + L+ IC G+T L KA + Sbjct: 172 IKDVAFSAPYFKTGQQVLAPKSAPIEGYDETLADQEICTATGSTAYAKLEADKKAGRL 229 >gi|213691606|ref|YP_002322192.1| extracellular solute-binding protein, family 3 [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213523067|gb|ACJ51814.1| extracellular solute-binding protein, family 3 [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 279 Score = 39.3 bits (90), Expect = 0.78, Method: Compositional matrix adjust. Identities = 33/168 (19%), Positives = 73/168 (43%), Gaps = 5/168 (2%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILG-DIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + F C +I + + S+ + G ++ GI G K +G + GFD Sbjct: 3 FTNTFKRKACRVIAALAAVACTMSLAACGADETGKIRIGIKFDQPGLG-FKKSGTYVGFD 61 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + ++ + +I + +K+R +Q+ +D++ +++ E ++F Sbjct: 62 VDVAKYIAKKLGYSEDQIIWKEAPSKQREAMIQNGDVDMILAT--YSITDERKKAVSFAG 119 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 + GQ ++ K I+ L+G +C G+T+ T+ + F + Sbjct: 120 PYFVAGQDLLVRKDDNSINGPEDLNGKRLCSVTGSTSAATVKEKFASE 167 >gi|170738481|ref|YP_001767136.1| extracellular solute-binding protein [Methylobacterium sp. 4-46] gi|168192755|gb|ACA14702.1| extracellular solute-binding protein family 3 [Methylobacterium sp. 4-46] Length = 272 Score = 39.3 bits (90), Expect = 0.78, Method: Compositional matrix adjust. Identities = 46/230 (20%), Positives = 92/230 (40%), Gaps = 16/230 (6%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 IK+RG L G+ F +G+ G + D ++ + +++ +P+ + R Sbjct: 30 IKQRGKLIVGVKADYRPFGFRDPSGNIIGLEPDLAADIAKRLG---VELELVPVVSSNRI 86 Query: 90 LALQSKQIDIL-SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 LQ ++D+L + +D R + A P Y D ++ KK GI+ QL G + Sbjct: 87 EFLQQGKVDLLIATISDKPERRRVVQ--AIDPQYYSDYVNILLPKKGGITEWGQLKGKPV 144 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 C +G +A + A + F+ E+ A + C Y D + + + Sbjct: 145 CATSGAWYNKDVARTYGAEI-----VAFDGSEKPLFALKQGNCVGYLYDQTFIQGRLGED 199 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS-----WTHYAMVTAEE 253 + +++ + I ++P A+ G+ ++ W + EE Sbjct: 200 EWKADYAMPLKGILEAPWIMAVASGNASLQAVMETATKDWMRTGFIVDEE 249 >gi|283784630|ref|YP_003364495.1| arginine ABC transporter, substrate-binding protein [Citrobacter rodentium ICC168] gi|282948084|emb|CBG87649.1| arginine ABC transporter, substrate-binding protein [Citrobacter rodentium ICC168] Length = 243 Score = 39.3 bits (90), Expect = 0.79, Method: Compositional matrix adjust. Identities = 49/203 (24%), Positives = 80/203 (39%), Gaps = 34/203 (16%) Query: 47 FAEVKANGDWKGFDVDFCRALSSAI-----FDDPSKIQYLPLNAKERFLALQSKQIDILS 101 F + AN GFDVD AL I F + + +P +L+ ++ D + Sbjct: 34 FESMDANNKIVGFDVDLANALCKEIDATCTFTNQAFDSLIP--------SLKFRRFDAVM 85 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 D T RE + L P Y+D + ++ +SV QL G + VQ GTT + + Sbjct: 86 AGMDITPEREKQV-LFTTP--YYDNSALFIGQQGKFTSVEQLKGKKVGVQNGTTHQKFI- 141 Query: 162 DYFKAHNMKYHP----IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 M HP + ++ + + R D GD + + + D P + Sbjct: 142 -------MDKHPEITTVPYDSYQNAKLDLQNGRIDGVFGDTAVV--TEWLKDNPKLAPVG 192 Query: 218 PDIISK----SPLAPAIIQGDTE 236 + K + L A+ QG+TE Sbjct: 193 DKVTDKDYFGTGLGIAVRQGNTE 215 >gi|152981667|ref|YP_001351969.1| solute-binding periplasmic protein of glutamate/aspartate ABC transporter [Janthinobacterium sp. Marseille] gi|151281744|gb|ABR90154.1| solute-binding periplasmic protein of glutamate/aspartate ABC transporter [Janthinobacterium sp. Marseille] Length = 300 Score = 39.3 bits (90), Expect = 0.79, Method: Compositional matrix adjust. Identities = 51/232 (21%), Positives = 100/232 (43%), Gaps = 6/232 (2%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD---PS-KIQYLP 82 L IK + G + F+ + G+ VD C + + D P+ K+ P Sbjct: 32 LKKIKDTNSITIGYRESSIPFSFLDDKQQPIGYAVDLCMKIVDTVKADLKLPNLKVVMQP 91 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + + R L++ ID+ +T + +R+ + +F P + + K I+S+ Sbjct: 92 VTSSNRIPLLRNGTIDLECGSTTNSKVRQEQV--SFGPNYFVINVTAAVKKTSNINSLDD 149 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+G +I +GTT+ L Y K N++ I + E R A+ D L Sbjct: 150 LNGKTISTTSGTTSVPLLKGYKKTENIQVKEIYGKDHAEAFLLMADDRAVAFVMDNILLA 209 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 + RP ++ ILP+ +S+ P + + + D ++ +V + A++ + E+ Sbjct: 210 GQIANSKRPGDYKILPESLSQEPYSMMLRKDDPQFKALVDKSIGAVMKSGEI 261 >gi|54302121|ref|YP_132114.1| glycosylase [Photobacterium profundum SS9] gi|46915542|emb|CAG22314.1| hypothetical glycosylase [Photobacterium profundum SS9] Length = 480 Score = 39.3 bits (90), Expect = 0.79, Method: Compositional matrix adjust. Identities = 40/168 (23%), Positives = 75/168 (44%), Gaps = 16/168 (9%) Query: 1 MYKDFFVSILCLIILFFTSFS------TNASILGD---IKKRGFLKCGINTGLVGFAEVK 51 M K F +++LC TSF+ N GD I + G ++ ++ L GF + Sbjct: 1 MRKRFVIALLCFNAFISTSFALEVFPINNTKFTGDLTEISEHGVIRILVSADL-GFYYLD 59 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSK---IQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 G KG + + ++ + +Q +P+N + ALQ+ DI++ N T Sbjct: 60 K-GHPKGITSEMLLLFEQHVLNNTKQKLHLQVIPINRDQLLPALQAGVGDIVAANLTITH 118 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTT 155 R+ ++ + PI + FI H K I+ + LS ++ ++A ++ Sbjct: 119 QRKKTVDFS-SPILSNINEIFITHADKSPITQLKNLSKKNVWIRASSS 165 >gi|16759800|ref|NP_455417.1| arginine-binding periplasmic protein 1 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16764251|ref|NP_459866.1| arginine transport system [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167992143|ref|ZP_02573241.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168230797|ref|ZP_02655855.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168236835|ref|ZP_02661893.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168240771|ref|ZP_02665703.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168263590|ref|ZP_02685563.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168466508|ref|ZP_02700370.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168819946|ref|ZP_02831946.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194451374|ref|YP_002044920.1| arginine ABC transporter periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194472996|ref|ZP_03078980.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194735976|ref|YP_002113983.1| arginine ABC transporter periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197264800|ref|ZP_03164874.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|198245831|ref|YP_002214854.1| arginine ABC transporter periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|204929825|ref|ZP_03220846.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205352139|ref|YP_002225940.1| arginine-binding periplasmic protein 1 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|213021407|ref|ZP_03335854.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] gi|213052700|ref|ZP_03345578.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213418750|ref|ZP_03351816.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213428039|ref|ZP_03360789.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213580628|ref|ZP_03362454.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213609524|ref|ZP_03369350.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213647845|ref|ZP_03377898.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|238913407|ref|ZP_04657244.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289804213|ref|ZP_06534842.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Typhi str. AG3] gi|289825016|ref|ZP_06544379.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25296354|pir||AG0607 arginine-binding periplasmic protein 1 precursor [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16419398|gb|AAL19825.1| arginine transport system [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16502093|emb|CAD05329.1| arginine-binding periplasmic protein 1 precursor [Salmonella enterica subsp. enterica serovar Typhi] gi|194409678|gb|ACF69897.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194459360|gb|EDX48199.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194711478|gb|ACF90699.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195630902|gb|EDX49488.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197243055|gb|EDY25675.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197290097|gb|EDY29454.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197940347|gb|ACH77680.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|204320819|gb|EDZ06020.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205271920|emb|CAR36763.1| arginine-binding periplasmic protein 1 precursor [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205329600|gb|EDZ16364.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205334641|gb|EDZ21405.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205339789|gb|EDZ26553.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205343109|gb|EDZ29873.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205347815|gb|EDZ34446.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|261246145|emb|CBG23948.1| arginine-binding periplasmic protein 1 precursor [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267992652|gb|ACY87537.1| arginine transport system [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|312911917|dbj|BAJ35891.1| arginine ABC transporter substrate binding protein ArtI [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320085164|emb|CBY94951.1| Arginine-binding periplasmic protein Flags: Precursor [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321223251|gb|EFX48320.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322616364|gb|EFY13273.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322619614|gb|EFY16489.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622690|gb|EFY19535.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628602|gb|EFY25389.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631539|gb|EFY28295.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322637066|gb|EFY33769.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641735|gb|EFY38371.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644472|gb|EFY41012.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650067|gb|EFY46484.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322654140|gb|EFY50463.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658055|gb|EFY54322.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322663529|gb|EFY59731.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322670265|gb|EFY66405.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322671501|gb|EFY67623.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676857|gb|EFY72924.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682782|gb|EFY78801.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686461|gb|EFY82443.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323196085|gb|EFZ81248.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323196769|gb|EFZ81913.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202952|gb|EFZ87986.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208992|gb|EFZ93929.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323211897|gb|EFZ96725.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323215171|gb|EFZ99916.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323222374|gb|EGA06752.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323223890|gb|EGA08189.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229849|gb|EGA13972.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233074|gb|EGA17170.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240809|gb|EGA24851.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323243126|gb|EGA27146.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248668|gb|EGA32596.1| putative ABC transporter arginine-biding protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251669|gb|EGA35536.1| putative ABC transporter arginine-biding protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323257343|gb|EGA41041.1| putative ABC transporter arginine-biding protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323261931|gb|EGA45497.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323267947|gb|EGA51426.1| putative ABC transporter arginine-biding protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323271986|gb|EGA55401.1| putative ABC transporter arginine-biding protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 243 Score = 39.3 bits (90), Expect = 0.79, Method: Compositional matrix adjust. Identities = 49/201 (24%), Positives = 80/201 (39%), Gaps = 30/201 (14%) Query: 47 FAEVKANGDWKGFDVDFCRAL-----SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101 F + AN GFDVD AL +S F + + +P +L+ ++ D + Sbjct: 34 FESMDANNKIVGFDVDLANALCKEIDASCTFTNQAFDSLIP--------SLKFRRFDAVM 85 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 D T RE + L P Y+D + ++ +SV QL G + VQ GTT + + Sbjct: 86 AGMDITPEREKQV-LFTTP--YYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFI- 141 Query: 162 DYFKAHNMKYHP----IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHV 215 M HP + ++ + + R DA GD + + N + P Sbjct: 142 -------MDKHPEITTVPYDSYQNAKLDLQNGRIDAVFGDTAVVTEWLKANPKLAPVGDK 194 Query: 216 ILPDIISKSPLAPAIIQGDTE 236 + + L A+ QG+TE Sbjct: 195 VTDKDYFGTGLGIAVRQGNTE 215 >gi|323129194|gb|ADX16624.1| arginine-binding periplasmic protein 1precursor [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] Length = 245 Score = 39.3 bits (90), Expect = 0.79, Method: Compositional matrix adjust. Identities = 47/197 (23%), Positives = 80/197 (40%), Gaps = 22/197 (11%) Query: 47 FAEVKANGDWKGFDVDFCRAL-----SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101 F + AN GFDVD AL +S F + + +P +L+ ++ D + Sbjct: 36 FESMDANNKIVGFDVDLANALCKEIDASCTFTNQAFDSLIP--------SLKFRRFDAVM 87 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 D T RE + L P Y+D + ++ +SV QL G + VQ GTT + + Sbjct: 88 AGMDITPEREKQV-LFTTP--YYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFIM 144 Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPD 219 D + + + ++ + + R DA GD + + N + P + Sbjct: 145 DKYP----EITTVPYDSYQNAKLDLQNGRIDAVFGDTAVVTEWLKANPKLAPVGDKVTDK 200 Query: 220 IISKSPLAPAIIQGDTE 236 + L A+ QG+TE Sbjct: 201 DYFGTGLGIAVRQGNTE 217 >gi|170691878|ref|ZP_02883042.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] gi|170143162|gb|EDT11326.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] Length = 306 Score = 39.3 bits (90), Expect = 0.79, Method: Compositional matrix adjust. Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 12/142 (8%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD---PS-KIQYLPLNAKERFLA 91 + G V F+ AN G+ +D + I D P K++ +P+ ++ R Sbjct: 46 ITIGYRDASVPFSYYDANQKPIGYSIDVANLVIERIRKDLKLPDLKVRTIPITSQNRLSL 105 Query: 92 LQSKQIDI--LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 LQ+ ID S + R++S +F + G +++ K GI L ++ Sbjct: 106 LQNGTIDFECTSTTNNAERARQVSFSNSF----FIIGTRLLVNTKSGIKDFDDLKDKTVV 161 Query: 150 VQAGTTTELTL--ADYFKAHNM 169 V AGTT+E +L + K+ NM Sbjct: 162 VGAGTTSEKSLRKMNVEKSMNM 183 >gi|170735824|ref|YP_001777084.1| extracellular solute-binding protein [Burkholderia cenocepacia MC0-3] gi|169818012|gb|ACA92594.1| extracellular solute-binding protein family 3 [Burkholderia cenocepacia MC0-3] Length = 250 Score = 39.3 bits (90), Expect = 0.79, Method: Compositional matrix adjust. Identities = 42/163 (25%), Positives = 63/163 (38%), Gaps = 11/163 (6%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 L G +T + F E K + GFD+D ++ D K P++ ALQ++ Sbjct: 28 LVVGTDTSFMPF-EFKQGDKYVGFDLDLWAEIAK---DQGWKYTIQPMDFAGLIPALQTQ 83 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDG-QGFIMHKKKGISSVSQLSGASICVQAGT 154 ID+ T+ E + F Y G + I S+ L+G I + GT Sbjct: 84 NIDVALSGM--TIKEERKKAIDFSAPYYDSGLAAMVQAGNTSIKSIDDLNGKVIAAKTGT 141 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 T D+ KAH F +++ A A R DA D Sbjct: 142 AT----IDWIKAHLKPKEVRQFPNIDQAYLALEAGRVDAAMHD 180 >gi|171320533|ref|ZP_02909559.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MEX-5] gi|171094226|gb|EDT39307.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MEX-5] Length = 266 Score = 39.3 bits (90), Expect = 0.80, Method: Compositional matrix adjust. Identities = 40/180 (22%), Positives = 76/180 (42%), Gaps = 14/180 (7%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 S A +L +K+ G LK + F A G +GFDVD A+++ + P+ + Sbjct: 24 SHAADLLDTVKQAGVLKIALEGTYPPFDYRNAEGQLEGFDVDVATAVAARLGVKPA---F 80 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK---KGI 137 + LQ+ + D++ T R+ +L + P Y Q ++ ++ + Sbjct: 81 VTTEWSGILAGLQAGKFDVIVNQVAITPSRQQALDFSM-PYVYSSAQ--LLQRQNDTRAF 137 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 S+ +L G + V G+ + L A +++ +P E + ++ A R DA D Sbjct: 138 KSLDELKGKKVGVTMGSNY-VDLVKTVPAIDLQVYPGTPENLRDLAAG----RIDAAVND 192 >gi|56414020|ref|YP_151095.1| arginine-binding periplasmic protein 1 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197362943|ref|YP_002142580.1| arginine-binding periplasmic protein 1 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56128277|gb|AAV77783.1| arginine-binding periplasmic protein 1 precursor [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197094420|emb|CAR59936.1| arginine-binding periplasmic protein 1 precursor [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 243 Score = 39.3 bits (90), Expect = 0.80, Method: Compositional matrix adjust. Identities = 49/201 (24%), Positives = 80/201 (39%), Gaps = 30/201 (14%) Query: 47 FAEVKANGDWKGFDVDFCRAL-----SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101 F + AN GFDVD AL +S F + + +P +L+ ++ D + Sbjct: 34 FESMDANNKIVGFDVDLANALCKEIDASCTFTNQAFDSLIP--------SLKFRRFDAVM 85 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 D T RE + L P Y+D + ++ +SV QL G + VQ GTT + + Sbjct: 86 AGMDITPEREKQV-LFTTP--YYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFI- 141 Query: 162 DYFKAHNMKYHP----IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHV 215 M HP + ++ + + R DA GD + + N + P Sbjct: 142 -------MDKHPEITTVPYDSYQNAKLDLQNGRIDAVFGDTAVVTEWLKANPKLVPVGDK 194 Query: 216 ILPDIISKSPLAPAIIQGDTE 236 + + L A+ QG+TE Sbjct: 195 VTDKDYFGTGLGIAVRQGNTE 215 >gi|294083904|ref|YP_003550661.1| putative amino acid ABC transporter [Candidatus Puniceispirillum marinum IMCC1322] gi|292663476|gb|ADE38577.1| putative amino acid ABC transporter [Candidatus Puniceispirillum marinum IMCC1322] Length = 277 Score = 39.3 bits (90), Expect = 0.81, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 12/135 (8%) Query: 9 ILCLIILF---FTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 I+ L+ LF TS A ++ DI+KRG LK G++T V +A GD GF++D Sbjct: 12 IMALVALFGVVATSLPAIADDLIADIQKRGTLKVGMST-FVPWAMRDKQGDLIGFEIDVA 70 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 L++ D +++++P +L +K+ D++ T R +++ T + Sbjct: 71 TKLAA---DMGVEVEFVPTAWSGIIPSLIAKKFDVIIGGMSITPQRNLTVNFT----TPY 123 Query: 125 DGQGFIMHKKKGISS 139 G +M K +SS Sbjct: 124 AHSGQMMAANKKLSS 138 >gi|200389730|ref|ZP_03216341.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199602175|gb|EDZ00721.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 245 Score = 39.3 bits (90), Expect = 0.81, Method: Compositional matrix adjust. Identities = 49/201 (24%), Positives = 80/201 (39%), Gaps = 30/201 (14%) Query: 47 FAEVKANGDWKGFDVDFCRAL-----SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101 F + AN GFDVD AL +S F + + +P +L+ ++ D + Sbjct: 36 FESMDANNKIVGFDVDLANALCKEIDASCTFTNQAFDSLIP--------SLKFRRFDAVM 87 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 D T RE + L P Y+D + ++ +SV QL G + VQ GTT + + Sbjct: 88 AGMDITPEREKQV-LFTTP--YYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFI- 143 Query: 162 DYFKAHNMKYHP----IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHV 215 M HP + ++ + + R DA GD + + N + P Sbjct: 144 -------MDKHPEITTVPYDSYQNAKLDLQNGRIDAVFGDTAVVTEWLKANPKLVPVGDK 196 Query: 216 ILPDIISKSPLAPAIIQGDTE 236 + + L A+ QG+TE Sbjct: 197 VTDKDYFGTGLGIAVRQGNTE 217 >gi|46204163|ref|ZP_00050410.2| COG0834: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Magnetospirillum magnetotacticum MS-1] Length = 253 Score = 39.3 bits (90), Expect = 0.81, Method: Compositional matrix adjust. Identities = 30/134 (22%), Positives = 57/134 (42%), Gaps = 6/134 (4%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD----DPSKIQYLP 82 L +K+RG L G V F+ + N G+ + C ++ A+ D +++ P Sbjct: 95 LRKVKERGALTLGYRDASVPFSYLDGNQKPVGYAYEICLKVAEAVKAHLKLDQLEVKLNP 154 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + + R + + ID+ +T R+ AF + F+ K+KG+ Sbjct: 155 VTSATRIPLIANGTIDLECGSTTNNADRQRQA--AFTNTHFLTATRFVAKKEKGLDRTDD 212 Query: 143 LSGASICVQAGTTT 156 L G ++ +GTT+ Sbjct: 213 LKGRTVVSTSGTTS 226 >gi|331672187|ref|ZP_08372979.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli TA280] gi|331070654|gb|EGI42017.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli TA280] Length = 327 Score = 39.3 bits (90), Expect = 0.81, Method: Compositional matrix adjust. Identities = 34/150 (22%), Positives = 61/150 (40%), Gaps = 6/150 (4%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 S L I K G + G V F+ G+ D+ A+ A+ + P +++ Sbjct: 55 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 114 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ AF + G + K I Sbjct: 115 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQA--AFSDTIFVVGTRLLTKKGGDIKD 172 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNM 169 + L G ++ V +GTT+E+ L + M Sbjct: 173 FADLKGKAVVVTSGTTSEVLLNKLNEEQKM 202 >gi|161614845|ref|YP_001588810.1| hypothetical protein SPAB_02598 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194444543|ref|YP_002040128.1| arginine ABC transporter periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|197248178|ref|YP_002145843.1| arginine ABC transporter periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|161364209|gb|ABX67977.1| hypothetical protein SPAB_02598 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194403206|gb|ACF63428.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|197211881|gb|ACH49278.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|326622607|gb|EGE28952.1| Bacterial extracellular solute-binding protein, family 3 [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326627182|gb|EGE33525.1| Bacterial extracellular solute-binding protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 245 Score = 39.3 bits (90), Expect = 0.81, Method: Compositional matrix adjust. Identities = 49/201 (24%), Positives = 80/201 (39%), Gaps = 30/201 (14%) Query: 47 FAEVKANGDWKGFDVDFCRAL-----SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101 F + AN GFDVD AL +S F + + +P +L+ ++ D + Sbjct: 36 FESMDANNKIVGFDVDLANALCKEIDASCTFTNQAFDSLIP--------SLKFRRFDAVM 87 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 D T RE + L P Y+D + ++ +SV QL G + VQ GTT + + Sbjct: 88 AGMDITPEREKQV-LFTTP--YYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFI- 143 Query: 162 DYFKAHNMKYHP----IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHV 215 M HP + ++ + + R DA GD + + N + P Sbjct: 144 -------MDKHPEITTVPYDSYQNAKLDLQNGRIDAVFGDTAVVTEWLKANPKLAPVGDK 196 Query: 216 ILPDIISKSPLAPAIIQGDTE 236 + + L A+ QG+TE Sbjct: 197 VTDKDYFGTGLGIAVRQGNTE 217 >gi|107026632|ref|YP_624143.1| glutamine ABC transporter periplasmic protein [Burkholderia cenocepacia AU 1054] gi|116692178|ref|YP_837711.1| glutamine ABC transporter periplasmic protein [Burkholderia cenocepacia HI2424] gi|105896006|gb|ABF79170.1| L-glutamine-binding protein [Burkholderia cenocepacia AU 1054] gi|116650178|gb|ABK10818.1| L-glutamine-binding protein [Burkholderia cenocepacia HI2424] Length = 250 Score = 39.3 bits (90), Expect = 0.81, Method: Compositional matrix adjust. Identities = 42/163 (25%), Positives = 63/163 (38%), Gaps = 11/163 (6%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 L G +T + F E K + GFD+D ++ D K P++ ALQ++ Sbjct: 28 LVVGTDTSFMPF-EFKQGDKYVGFDLDLWAEIAK---DQGWKYTIQPMDFAGLIPALQTQ 83 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDG-QGFIMHKKKGISSVSQLSGASICVQAGT 154 ID+ T+ E + F Y G + I S+ L+G I + GT Sbjct: 84 NIDVALSGM--TIKEERKKAIDFSAPYYDSGLAAMVQAGNTSIKSIDDLNGKVIAAKTGT 141 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 T D+ KAH F +++ A A R DA D Sbjct: 142 AT----IDWIKAHLKPKEVRQFPNIDQAYLALEAGRVDAAMHD 180 >gi|313124053|ref|YP_004034312.1| ABC amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280616|gb|ADQ61335.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 286 Score = 39.3 bits (90), Expect = 0.82, Method: Compositional matrix adjust. Identities = 28/118 (23%), Positives = 54/118 (45%), Gaps = 3/118 (2%) Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 +T L G +K G +GF++D A++ I SK + P+ K R L + +D + Sbjct: 54 DTKLFGLTNIK-TGKIEGFEIDLATAITKQILGPKSKAVFRPITEKTRITLLHNGSLDAV 112 Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTEL 158 + T+ +E + F + + + I+ K I S++ L+ + V A T++ Sbjct: 113 I--STMTITKERMKVIDFSDVYFNANESMIVKKSSKIRSIADLNKKGVVVIAIKGTDV 168 >gi|300817825|ref|ZP_07098039.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 107-1] gi|331651668|ref|ZP_08352687.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli M718] gi|300529522|gb|EFK50584.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 107-1] gi|324016061|gb|EGB85280.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 117-3] gi|331049946|gb|EGI22004.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli M718] Length = 327 Score = 39.3 bits (90), Expect = 0.82, Method: Compositional matrix adjust. Identities = 35/155 (22%), Positives = 62/155 (40%), Gaps = 6/155 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 S L I K G + G V F+ G+ D+ A+ A+ + P +++ Sbjct: 55 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 114 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ AF + G + K I Sbjct: 115 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQA--AFSDTIFVVGTRLLTKKGGDIKD 172 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + L G ++ V +GTT+E+ L + M I Sbjct: 173 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRII 207 >gi|281600010|gb|ADA72994.1| putative periplasmic binding transport protein [Shigella flexneri 2002017] Length = 327 Score = 39.3 bits (90), Expect = 0.82, Method: Compositional matrix adjust. Identities = 35/155 (22%), Positives = 62/155 (40%), Gaps = 6/155 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 S L I K G + G V F+ G+ D+ A+ A+ + P +++ Sbjct: 55 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 114 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ AF + G + K I Sbjct: 115 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQA--AFSDTIFVVGTRLLTKKGGDIKD 172 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + L G ++ V +GTT+E+ L + M I Sbjct: 173 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRII 207 >gi|116514325|ref|YP_813231.1| amino acid ABC transporter periplasmic protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116093640|gb|ABJ58793.1| amino acid ABC transporter substrate-binding protein, PAAT family [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 295 Score = 39.3 bits (90), Expect = 0.82, Method: Compositional matrix adjust. Identities = 28/118 (23%), Positives = 54/118 (45%), Gaps = 3/118 (2%) Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 +T L G +K G +GF++D A++ I SK + P+ K R L + +D + Sbjct: 63 DTKLFGLTNIK-TGKIEGFEIDLATAITKQILGPKSKAVFRPITEKTRITLLHNGSLDAV 121 Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTEL 158 + T+ +E + F + + + I+ K I S++ L+ + V A T++ Sbjct: 122 I--STMTITKERMKVIDFSDVYFNANESMIVKKSSKIRSIADLNKKGVVVIAIKGTDV 177 >gi|210630037|ref|ZP_03296222.1| hypothetical protein COLSTE_00106 [Collinsella stercoris DSM 13279] gi|210160714|gb|EEA91685.1| hypothetical protein COLSTE_00106 [Collinsella stercoris DSM 13279] Length = 306 Score = 39.3 bits (90), Expect = 0.83, Method: Compositional matrix adjust. Identities = 47/226 (20%), Positives = 93/226 (41%), Gaps = 29/226 (12%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 G L G + + V +G++ GFD+D RA++ + +++ ++ + L+ Sbjct: 73 GKLIVGFDQSYPPYGYVGDDGEYTGFDLDLARAVAE---EQGWELELEAIDWDAKDAMLK 129 Query: 94 SKQIDIL-------SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 S I+ + +R D+T F + Q ++ GI L+G Sbjct: 130 SGAINCIWNGFTMDNREDDYT----------FSDPYMLNAQVVVVRADSGIEDAEGLAGK 179 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY---RAHRCDAYTGDIS-ALY 202 ++ Q + E L + A ++ E + + + A+ + DA D+S A+Y Sbjct: 180 TVVTQVDSAAEAVLKE--DAADLAATFASLETIGDYNTAFMQLESGAVDAVACDLSIAMY 237 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 + +P +V+L D +S+ A +GDT V+ T A+ Sbjct: 238 QMTA---KPDAYVMLDDYLSEENYAVGFKKGDTATAKKVTETLKAL 280 >gi|73542273|ref|YP_296793.1| extracellular solute-binding protein [Ralstonia eutropha JMP134] gi|72119686|gb|AAZ61949.1| extracellular solute-binding protein, family 3 [Ralstonia eutropha JMP134] Length = 270 Score = 39.3 bits (90), Expect = 0.83, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 74/179 (41%), Gaps = 12/179 (6%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 ++ A +L +K+ G LK G+ F + GFDVD RA+++ + P ++ Sbjct: 29 ASAADLLDTVKQAGVLKIGLEGTYPPFGFRNPKNELDGFDVDVARAVAAKLGVKP---EF 85 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGIS 138 + LQ+ + D++ T R+ L + P Y Q I K K+ + Sbjct: 86 VTTEWSGIIAGLQAGKFDVIVNQVSVTPQRKQVLDFS-TPYVYSAAQ-LIQRKDDKREFN 143 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 S+ L G + V G+ LA ++K +P E + ++ A R DA D Sbjct: 144 SLEALKGHKLGVSLGSNYN-ELAKSVPGIDVKTYPGAPEYLRDL----AAQRVDAALND 197 >gi|300931590|ref|ZP_07146902.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 187-1] gi|300460614|gb|EFK24107.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 187-1] Length = 327 Score = 39.3 bits (90), Expect = 0.83, Method: Compositional matrix adjust. Identities = 35/155 (22%), Positives = 62/155 (40%), Gaps = 6/155 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 S L I K G + G V F+ G+ D+ A+ A+ + P +++ Sbjct: 55 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 114 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ AF + G + K I Sbjct: 115 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQA--AFSDTIFVVGTRLLTKKGGDIKD 172 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + L G ++ V +GTT+E+ L + M I Sbjct: 173 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRII 207 >gi|300927239|ref|ZP_07142971.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 182-1] gi|301329186|ref|ZP_07222177.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 78-1] gi|300416805|gb|EFK00116.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 182-1] gi|300844474|gb|EFK72234.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 78-1] Length = 327 Score = 39.3 bits (90), Expect = 0.83, Method: Compositional matrix adjust. Identities = 35/155 (22%), Positives = 62/155 (40%), Gaps = 6/155 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 S L I K G + G V F+ G+ D+ A+ A+ + P +++ Sbjct: 55 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 114 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ AF + G + K I Sbjct: 115 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQA--AFSDTIFVVGTRLLTKKGGDIKD 172 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + L G ++ V +GTT+E+ L + M I Sbjct: 173 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRII 207 >gi|291281605|ref|YP_003498423.1| Glutamate/aspartate periplasmic binding protein [Escherichia coli O55:H7 str. CB9615] gi|290761478|gb|ADD55439.1| Glutamate/aspartate periplasmic binding protein [Escherichia coli O55:H7 str. CB9615] Length = 327 Score = 39.3 bits (90), Expect = 0.83, Method: Compositional matrix adjust. Identities = 35/155 (22%), Positives = 62/155 (40%), Gaps = 6/155 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 S L I K G + G V F+ G+ D+ A+ A+ + P +++ Sbjct: 55 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 114 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ AF + G + K I Sbjct: 115 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQA--AFSDTIFVVGTRLLTKKGGDIKD 172 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + L G ++ V +GTT+E+ L + M I Sbjct: 173 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRII 207 >gi|163858766|ref|YP_001633064.1| solute-binding protein [Bordetella petrii DSM 12804] gi|163262494|emb|CAP44797.1| probable solute-binding protein [Bordetella petrii] Length = 276 Score = 39.3 bits (90), Expect = 0.83, Method: Compositional matrix adjust. Identities = 31/143 (21%), Positives = 69/143 (48%), Gaps = 16/143 (11%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK-----GFDVDFCRALSSAIFDDPS 76 +A L +IK+RG L CG +G +E + D K G+++D C+A++ + Sbjct: 22 AHADALANIKERGALVCGT----LGTSEPFSFQDPKTRQVVGYEIDLCKAIADHLG---V 74 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 K++ ++ R L ++D+++ N W+ R + +++ Y Q ++ + Sbjct: 75 KLEVKMISVAARIPELAGGRVDVVAANLGWSPDRAKQIDYSYQ--HYVSPQKILIRRDDA 132 Query: 137 --ISSVSQLSGASICVQAGTTTE 157 + + + L+G + AG+++E Sbjct: 133 GTLKTNADLAGKRVSAVAGSSSE 155 >gi|325526098|gb|EGD03758.1| glutamine ABC transporter periplasmic protein [Burkholderia sp. TJI49] Length = 250 Score = 39.3 bits (90), Expect = 0.84, Method: Compositional matrix adjust. Identities = 45/166 (27%), Positives = 64/166 (38%), Gaps = 17/166 (10%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 L G +T + F E K + GFD+D ++ D K P++ ALQ++ Sbjct: 28 LVVGTDTSFMPF-EFKQGDKYVGFDLDLWAEIAK---DQGWKYTIQPMDFAGLIPALQTQ 83 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDG-QGFIMHKKKGISSVSQLSGASICVQAGT 154 ID+ T+ E + F Y G + I S+ L+G I + GT Sbjct: 84 NIDVALSGM--TIKEERKKAIDFSAPYYDSGLAAMVQAGNTSIKSIDDLNGKVIAAKTGT 141 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAY---RAHRCDAYTGD 197 T D+ KAH P + ID AY A R DA D Sbjct: 142 AT----IDWIKAH---LKPKEIRQFPNIDQAYLALEAGRVDAAMHD 180 >gi|315299197|gb|EFU58451.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 16-3] gi|332104148|gb|EGJ07494.1| glutamate/aspartate periplasmic binding protein [Shigella sp. D9] Length = 325 Score = 39.3 bits (90), Expect = 0.84, Method: Compositional matrix adjust. Identities = 35/155 (22%), Positives = 62/155 (40%), Gaps = 6/155 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 S L I K G + G V F+ G+ D+ A+ A+ + P +++ Sbjct: 53 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 112 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ AF + G + K I Sbjct: 113 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQA--AFSDTIFVVGTRLLTKKGGDIKD 170 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + L G ++ V +GTT+E+ L + M I Sbjct: 171 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRII 205 >gi|29142427|ref|NP_805769.1| arginine-binding periplasmic protein 1 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|29138057|gb|AAO69618.1| arginine-binding periplasmic protein 1 precursor [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 243 Score = 39.3 bits (90), Expect = 0.84, Method: Compositional matrix adjust. Identities = 49/201 (24%), Positives = 80/201 (39%), Gaps = 30/201 (14%) Query: 47 FAEVKANGDWKGFDVDFCRAL-----SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101 F + AN GFDVD AL +S F + + +P +L+ ++ D + Sbjct: 34 FESMDANSKIVGFDVDLANALCKEIDASCTFTNQAFDSLIP--------SLKFRRFDAVM 85 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 D T RE + L P Y+D + ++ +SV QL G + VQ GTT + + Sbjct: 86 AGMDITPEREKQV-LFTTP--YYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFI- 141 Query: 162 DYFKAHNMKYHP----IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHV 215 M HP + ++ + + R DA GD + + N + P Sbjct: 142 -------MDKHPEITTVPYDSYQNAKLDLQNGRIDAVFGDTAVVTEWLKANPKLAPVGDK 194 Query: 216 ILPDIISKSPLAPAIIQGDTE 236 + + L A+ QG+TE Sbjct: 195 VTDKDYFGTGLGIAVRQGNTE 215 >gi|193069104|ref|ZP_03050062.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli E110019] gi|218694095|ref|YP_002401762.1| glutamate and aspartate transporter subunit [Escherichia coli 55989] gi|192957648|gb|EDV88093.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli E110019] gi|218350827|emb|CAU96521.1| glutamate and aspartate transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli 55989] gi|324116729|gb|EGC10644.1| extracellular solute-binding protein 3 [Escherichia coli E1167] Length = 302 Score = 39.3 bits (90), Expect = 0.84, Method: Compositional matrix adjust. Identities = 35/155 (22%), Positives = 62/155 (40%), Gaps = 6/155 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 S L I K G + G V F+ G+ D+ A+ A+ + P +++ Sbjct: 30 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ AF + G + K I Sbjct: 90 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQA--AFSDTIFVVGTRLLTKKGGDIKD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + L G ++ V +GTT+E+ L + M I Sbjct: 148 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRII 182 >gi|270263718|ref|ZP_06191987.1| glutamate/aspartate periplasmic-binding protein, precursor [Serratia odorifera 4Rx13] gi|270042602|gb|EFA15697.1| glutamate/aspartate periplasmic-binding protein, precursor [Serratia odorifera 4Rx13] Length = 276 Score = 39.3 bits (90), Expect = 0.85, Method: Compositional matrix adjust. Identities = 45/217 (20%), Positives = 83/217 (38%), Gaps = 6/217 (2%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQYLP 82 L IK G + G V F+ G+ D+ + A+ + P +++ LP Sbjct: 29 LKKIKDNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNQIVDAVKKKLNMPDLQVKMLP 88 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R LQ+ D +T + R+ AF + G ++ K + Sbjct: 89 ITSQNRIPLLQNGTFDFECGSTTNNVERQKQA--AFSDTIFVVGTRLLVKKGSDVKDFKD 146 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+G + V +GTT+E+ L + M I + + + R A+ D + L Sbjct: 147 LAGKPVVVTSGTTSEVLLNKLNDSGKMNMRIISAKDHGDSFRTLESGRAVAFMMDDALLA 206 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + +P + IL SK + + D E+ N Sbjct: 207 GERAKAKKPDQWEILGTPQSKEAYGCMLRKDDAEFKN 243 >gi|283784426|ref|YP_003364291.1| glutamate/aspartate ABC transporter, substrate-binding protein [Citrobacter rodentium ICC168] gi|282947880|emb|CBG87442.1| glutamate/aspartate ABC transporter, substrate-binding protein [Citrobacter rodentium ICC168] Length = 302 Score = 39.3 bits (90), Expect = 0.85, Method: Compositional matrix adjust. Identities = 47/234 (20%), Positives = 88/234 (37%), Gaps = 6/234 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 S L I K G + G V F+ G+ D+ A+ A+ + P +++ Sbjct: 30 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ AF + G + K I Sbjct: 90 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQA--AFSNTIFVVGTRLLAKKGGDIKD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L G ++ V +GTT+E+ L M I + + + R A+ D + Sbjct: 148 FADLKGKAVVVTSGTTSEILLHKLNDEQKMDMRIISAKDHGDSFRTLESGRAVAFMMDDA 207 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 L + +P I+ S+ + + D E+ ++ T T+ E Sbjct: 208 LLAGERAKAKKPDNWEIVGKPQSEEAYGCMLRKNDPEFKKLMDETIAQAQTSGE 261 >gi|134045113|ref|YP_001096599.1| extracellular solute-binding protein [Methanococcus maripaludis C5] gi|132662738|gb|ABO34384.1| amino acid ABC transporter substrate-binding protein, PAAT family [Methanococcus maripaludis C5] Length = 252 Score = 39.3 bits (90), Expect = 0.85, Method: Compositional matrix adjust. Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 9/104 (8%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 S+ +++ + S I + + G L G+ L + + NG+ KGF++D + Sbjct: 3 SLYMVLLTLLSPLSNVVDIENEYQITGVLTVGVYPDLTPYT-YEENGELKGFEIDLINEI 61 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQID------ILSRNTD 105 + I P I Y N E + A+++KQID LSRN D Sbjct: 62 AKRIEVTPEFILYNYTN--EPYEAVKNKQIDCAISSNFLSRNND 103 >gi|107104175|ref|ZP_01368093.1| hypothetical protein PaerPA_01005248 [Pseudomonas aeruginosa PACS2] gi|296391926|ref|ZP_06881401.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa PAb1] Length = 259 Score = 39.3 bits (90), Expect = 0.86, Method: Compositional matrix adjust. Identities = 53/223 (23%), Positives = 94/223 (42%), Gaps = 14/223 (6%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 A + D KRG L+ G++ + F G GF+VD +A++ ++ K++ + Sbjct: 17 AGAVEDAVKRGTLRVGMDPTYMPFEMTNKRGQIIGFEVDLLKAMAKSM---GVKLELVST 73 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVS 141 + AL + + D++ + TL +E +L L F GQ ++ K + I S Sbjct: 74 SYDGIIPALLTDKFDMIG--SGMTLTQERNLRLNFSEPFIVVGQTLLVRKELEGKIKSYK 131 Query: 142 QLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L+ SI + GTT E+ KYH F+ E + DA+ D S Sbjct: 132 DLNDPQYSITSKIGTTGEIVARKLI--SKAKYHG--FDNEPEAVMDVVNGKADAFIYD-S 186 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + ++ + V L + PLA + +GD + N ++ Sbjct: 187 PYNVVAVSKFGAGKLVYLDQPFTYEPLAFGLKKGDYDSINFIN 229 >gi|204930952|ref|ZP_03221778.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204319996|gb|EDZ05201.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 266 Score = 39.3 bits (90), Expect = 0.88, Method: Compositional matrix adjust. Identities = 49/224 (21%), Positives = 91/224 (40%), Gaps = 12/224 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 SF+ + +L +K+RG L G+ F+ +G GF+VDF AL+ + K Sbjct: 27 SFA-DEGLLNKVKERGTLLVGLEGTYPPFSFQGEDGKLTGFEVDFAEALAKHL---GVKA 82 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-I 137 P +L +K+ID++ + +R+ + P T Q + +G I Sbjct: 83 SLKPTKWDGILASLDAKRIDVVINQVTISDVRKKKYDFS-TPYTISGVQALVKKGNEGTI 141 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + + L G + V GT E L + + +++ + + +++ R R DA Sbjct: 142 KTAADLQGKKVGVGLGTNYEEWLRQHVQGVDIRTYDDDPTKYQDL----RIGRIDAIL-- 195 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + L AL L + D S+ A+ +G+ + V Sbjct: 196 VDRLAALDLVKKTKGTLAVTGDAFSRQESGVALRKGNEDLLKAV 239 >gi|300863898|ref|ZP_07108816.1| conserved exported hypothetical protein [Oscillatoria sp. PCC 6506] gi|300338084|emb|CBN53962.1| conserved exported hypothetical protein [Oscillatoria sp. PCC 6506] Length = 285 Score = 39.3 bits (90), Expect = 0.88, Method: Compositional matrix adjust. Identities = 61/259 (23%), Positives = 107/259 (41%), Gaps = 25/259 (9%) Query: 1 MYKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K ++ + LI LFF + S S L DI++ G LK GI F + + +WKG Sbjct: 1 MSKKLTITAISLIFPLFFPTISLAQSALQDIRQNGVLKVGIRKDAAPFGYTEGD-NWKGL 59 Query: 60 DV---DFCRALSSAIFDDPSKIQYLPLNAKE-----RFLALQSKQIDILSRNTDWTLLRE 111 V + RA + +++ L E R+ ++ SK+ + T+ + Sbjct: 60 CVEGMEIFRASLEKQLNRSVRLEKLETVLDESSPQGRYRSITSKRAHL--ECGPNTINKN 117 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQ---LSGASICVQAGTTTELTLADYFKAHN 168 G+AF + G ++M K + V+ L +I V + T+ +A ++ N Sbjct: 118 SPTGIAFSLPFLYSGT-YLMVKPENRLRVNPSGFLQDLTIGVLGDSLTQQFIAGRYQLAN 176 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND-RPSEHVILPD----IISK 223 K + R + A + DA D L L P+++ ++P+ I+ Sbjct: 177 QKVYQGQSGRQTAVKDAVEG-KIDALASDGILLVGEALRQGLNPNQYALIPEKPLTCIAY 235 Query: 224 SPLAPAIIQGDTEWYNIVS 242 + PA D+EW IV+ Sbjct: 236 GMIVPA---NDSEWKEIVN 251 >gi|299531723|ref|ZP_07045127.1| extracellular solute-binding protein [Comamonas testosteroni S44] gi|298720282|gb|EFI61235.1| extracellular solute-binding protein [Comamonas testosteroni S44] Length = 269 Score = 39.3 bits (90), Expect = 0.88, Method: Compositional matrix adjust. Identities = 33/131 (25%), Positives = 56/131 (42%), Gaps = 6/131 (4%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQYLPLNA 85 IK+ G + G GF+ + G+ +D C + AI P I+Y + + Sbjct: 4 IKESGTITLGHREASFGFSYISDTATPIGYSLDICMKIVDAIKAELKQPKIDIKYQVVTS 63 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 + R + + +D+ +T T L E +AF P + + GI S++ L G Sbjct: 64 QNRIPLVTNGTVDLECGST--TNLVERQKDVAFSPDIFRYNVRMAVKASSGIKSIADLQG 121 Query: 146 ASICVQAGTTT 156 S+ AGTT+ Sbjct: 122 KSVVTTAGTTS 132 >gi|227524184|ref|ZP_03954233.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding/permease protein [Lactobacillus hilgardii ATCC 8290] gi|227088654|gb|EEI23966.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding/permease protein [Lactobacillus hilgardii ATCC 8290] Length = 476 Score = 39.3 bits (90), Expect = 0.88, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 13/118 (11%) Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + G D+D RA+++ + K++ PL A++S QID + T R+ Sbjct: 286 YVGIDMDLVRAIAN---EQGFKVKIKPLGFNAAVQAVESGQIDGVIAGMSITNARKAQFN 342 Query: 116 LAFRPITYFDGQGFIM--HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 + P YF G +M +KK + S+SQL G + V+ GT ADY + KY Sbjct: 343 FS-NP--YFT-SGVVMAVNKKSKVKSLSQLRGKKVAVKTGTAG----ADYANSIKKKY 392 >gi|157160143|ref|YP_001457461.1| glutamate and aspartate transporter subunit [Escherichia coli HS] gi|260853906|ref|YP_003227797.1| periplasmic-binding component GltI [Escherichia coli O26:H11 str. 11368] gi|312970730|ref|ZP_07784911.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli 1827-70] gi|331667009|ref|ZP_08367883.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli TA271] gi|157065823|gb|ABV05078.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli HS] gi|257752555|dbj|BAI24057.1| periplasmic-binding component GltI [Escherichia coli O26:H11 str. 11368] gi|310337379|gb|EFQ02517.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli 1827-70] gi|320198220|gb|EFW72824.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Escherichia coli EC4100B] gi|323153620|gb|EFZ39868.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli EPECa14] gi|331066233|gb|EGI38117.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli TA271] Length = 302 Score = 39.3 bits (90), Expect = 0.88, Method: Compositional matrix adjust. Identities = 35/155 (22%), Positives = 62/155 (40%), Gaps = 6/155 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 S L I K G + G V F+ G+ D+ A+ A+ + P +++ Sbjct: 30 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ AF + G + K I Sbjct: 90 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQA--AFSDTIFVVGTRLLTKKGGDIKD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + L G ++ V +GTT+E+ L + M I Sbjct: 148 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRII 182 >gi|300823028|ref|ZP_07103162.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 119-7] gi|300920529|ref|ZP_07136955.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 115-1] gi|331676315|ref|ZP_08377027.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli H591] gi|300412468|gb|EFJ95778.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 115-1] gi|300524377|gb|EFK45446.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 119-7] gi|331076373|gb|EGI47655.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli H591] Length = 327 Score = 39.3 bits (90), Expect = 0.89, Method: Compositional matrix adjust. Identities = 35/155 (22%), Positives = 62/155 (40%), Gaps = 6/155 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 S L I K G + G V F+ G+ D+ A+ A+ + P +++ Sbjct: 55 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 114 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ AF + G + K I Sbjct: 115 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQA--AFSDTIFVVGTRLLTKKGGDIKD 172 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + L G ++ V +GTT+E+ L + M I Sbjct: 173 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRII 207 >gi|218699020|ref|YP_002406649.1| glutamate and aspartate transporter subunit [Escherichia coli IAI39] gi|256020607|ref|ZP_05434472.1| glutamate and aspartate transporter subunit [Shigella sp. D9] gi|293408781|ref|ZP_06652620.1| glutamate and aspartate transporter subunit [Escherichia coli B354] gi|218369006|emb|CAR16760.1| glutamate and aspartate transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli IAI39] gi|284920455|emb|CBG33516.1| glutamate/aspartate ABC transporter, substrate-binding protein [Escherichia coli 042] gi|291471959|gb|EFF14442.1| glutamate and aspartate transporter subunit [Escherichia coli B354] gi|323191287|gb|EFZ76551.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli RN587/1] gi|323976362|gb|EGB71452.1| extracellular solute-binding protein 3 [Escherichia coli TW10509] Length = 302 Score = 39.3 bits (90), Expect = 0.90, Method: Compositional matrix adjust. Identities = 35/155 (22%), Positives = 62/155 (40%), Gaps = 6/155 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 S L I K G + G V F+ G+ D+ A+ A+ + P +++ Sbjct: 30 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ AF + G + K I Sbjct: 90 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQA--AFSDTIFVVGTRLLTKKGGDIKD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + L G ++ V +GTT+E+ L + M I Sbjct: 148 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRII 182 >gi|78062810|ref|YP_372718.1| glutamine ABC transporter periplasmic protein [Burkholderia sp. 383] gi|77970695|gb|ABB12074.1| L-glutamine-binding protein [Burkholderia sp. 383] Length = 250 Score = 39.3 bits (90), Expect = 0.90, Method: Compositional matrix adjust. Identities = 45/166 (27%), Positives = 64/166 (38%), Gaps = 17/166 (10%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 L G +T + F E K + GFD+D ++ D K P++ ALQ++ Sbjct: 28 LVVGTDTSFMPF-EFKQGDKYVGFDLDLWAEIAK---DQGWKYTIQPMDFAGLIPALQTQ 83 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDG-QGFIMHKKKGISSVSQLSGASICVQAGT 154 ID+ T+ E + F Y G + I S+ L+G I + GT Sbjct: 84 NIDVALSGM--TIKEERKKAIDFSAPYYDSGLAAMVQADNTTIKSIDDLNGKVIAAKTGT 141 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAY---RAHRCDAYTGD 197 T D+ KAH P + ID AY A R DA D Sbjct: 142 AT----IDWIKAH---LKPKEIRQFPNIDQAYLALEAGRVDAAMHD 180 >gi|194439879|ref|ZP_03071942.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli 101-1] gi|253774361|ref|YP_003037192.1| glutamate and aspartate transporter subunit [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254160734|ref|YP_003043842.1| glutamate and aspartate transporter subunit [Escherichia coli B str. REL606] gi|194421173|gb|EDX37197.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli 101-1] gi|242376428|emb|CAQ31130.1| gltI, subunit of GltIJKL glutamate ABC transporter [Escherichia coli BL21(DE3)] gi|253325405|gb|ACT30007.1| extracellular solute-binding protein family 3 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972635|gb|ACT38306.1| glutamate and aspartate transporter subunit [Escherichia coli B str. REL606] gi|253976829|gb|ACT42499.1| glutamate and aspartate transporter subunit [Escherichia coli BL21(DE3)] gi|323963223|gb|EGB58791.1| extracellular solute-binding protein 3 [Escherichia coli H489] Length = 302 Score = 39.3 bits (90), Expect = 0.90, Method: Compositional matrix adjust. Identities = 35/155 (22%), Positives = 62/155 (40%), Gaps = 6/155 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 S L I K G + G V F+ G+ D+ A+ A+ + P +++ Sbjct: 30 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ AF + G + K I Sbjct: 90 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQA--AFSDTIFVVGTRLLTKKGGDIKD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + L G ++ V +GTT+E+ L + M I Sbjct: 148 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRII 182 >gi|299067960|emb|CBJ39174.1| glutamate/aspartate transport protein; ABC superfamily, periplasmic binding component [Ralstonia solanacearum CMR15] Length = 298 Score = 39.3 bits (90), Expect = 0.91, Method: Compositional matrix adjust. Identities = 43/227 (18%), Positives = 88/227 (38%), Gaps = 6/227 (2%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS----KIQYLP 82 L IK G + G+ + F+ G+ D + A+ + +++ +P Sbjct: 29 LKKIKDTGTITLGVRDSSIPFSYNVGGVRTIGYSYDVATKVVEAVKEQLKLKDLQVKEIP 88 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R LQ+ IDI +T L R+ +F + G ++ K GI + Sbjct: 89 VTSQNRITLLQNGTIDIECGSTTNNLERQKQA--SFTNTIFIIGTRMMVKKDAGIKDWTD 146 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G ++ AGTT+E L + + I + + + R A+ D + LY Sbjct: 147 LKGKNVVTTAGTTSERLLRKMNDEKQLGMNIISTKDHGQSFLTLESGRAVAFMMDDALLY 206 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 + P++ +++ S+ + + D + + T M+ Sbjct: 207 GERAKARTPADWIVVGKPQSREAYGCMVRKDDAPFKTLADKTIVGMM 253 >gi|227510040|ref|ZP_03940089.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227512970|ref|ZP_03943019.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus buchneri ATCC 11577] gi|227083727|gb|EEI19039.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus buchneri ATCC 11577] gi|227190419|gb|EEI70486.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 716 Score = 39.3 bits (90), Expect = 0.91, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 13/118 (11%) Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + G D+D RA+++ + K++ PL A++S QID + T R+ Sbjct: 286 YVGIDMDLVRAIAN---EQGFKVKIKPLGFNAAVQAVESGQIDGVIAGMSITNARKAQFN 342 Query: 116 LAFRPITYFDGQGFIM--HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 + P YF G +M +KK + S+SQL G + V+ GT ADY + KY Sbjct: 343 FS-NP--YFT-SGVVMAVNKKSKVKSLSQLRGKKVAVKTGTAG----ADYANSIKKKY 392 >gi|193885219|pdb|2VHA|A Chain A, Debp gi|193885220|pdb|2VHA|B Chain B, Debp Length = 287 Score = 39.3 bits (90), Expect = 0.91, Method: Compositional matrix adjust. Identities = 35/155 (22%), Positives = 62/155 (40%), Gaps = 6/155 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 S L I K G + G V F+ G+ D+ A+ A+ + P +++ Sbjct: 7 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 66 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ AF + G + K I Sbjct: 67 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQA--AFSDTIFVVGTRLLTKKGGDIKD 124 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + L G ++ V +GTT+E+ L + M I Sbjct: 125 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRII 159 >gi|15896854|ref|NP_350203.1| amino acid ABC transporter periplasmic-binding protein [Clostridium acetobutylicum ATCC 824] gi|15026720|gb|AAK81543.1|AE007858_4 Amino acid (probably glutamine) ABC transporter, periplasmic binding protein component [Clostridium acetobutylicum ATCC 824] gi|325511028|gb|ADZ22664.1| Amino acid (probably glutamine) ABC transporter, periplasmic binding protein component [Clostridium acetobutylicum EA 2018] Length = 264 Score = 39.3 bits (90), Expect = 0.91, Method: Compositional matrix adjust. Identities = 40/168 (23%), Positives = 78/168 (46%), Gaps = 12/168 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGD-----IKKRGFLKCGINTGL--VGFAEVKAN 53 + K F +S++ ++ L + T+A++ D +KK + GI+ + F + KA Sbjct: 2 LKKIFSLSVVLVLTLAIFTGCTSATVSKDDSLERVKKAKEIVIGIDDTYPPMEFKD-KAT 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G GFD+D A++ + K +++P + FLAL+SK+ D++ + T R+ + Sbjct: 61 GKVSGFDIDMANAIAKKL---GVKTKFVPNSFDGIFLALKSKKFDVVHSSISITDERKKA 117 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 + + P Y F+ I + + + + GTT + LA Sbjct: 118 MIFS-DPYIYGGNAIFVKSDNTTIKNEKDFNNQVVGCEVGTTAQDVLA 164 >gi|15800369|ref|NP_286381.1| glutamate and aspartate transporter subunit [Escherichia coli O157:H7 EDL933] gi|15829948|ref|NP_308721.1| glutamate and aspartate transporter subunit [Escherichia coli O157:H7 str. Sakai] gi|30062157|ref|NP_836328.1| glutamate and aspartate transporter subunit [Shigella flexneri 2a str. 2457T] gi|56479704|ref|NP_706556.2| glutamate and aspartate transporter subunit [Shigella flexneri 2a str. 301] gi|82775933|ref|YP_402280.1| glutamate and aspartate transporter subunit [Shigella dysenteriae Sd197] gi|110804696|ref|YP_688216.1| glutamate and aspartate transporter subunit [Shigella flexneri 5 str. 8401] gi|168752225|ref|ZP_02777247.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC4113] gi|168758298|ref|ZP_02783305.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC4401] gi|168767102|ref|ZP_02792109.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC4486] gi|168777604|ref|ZP_02802611.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC4196] gi|168779146|ref|ZP_02804153.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC4076] gi|168786505|ref|ZP_02811512.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC869] gi|168802435|ref|ZP_02827442.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC508] gi|195939393|ref|ZP_03084775.1| glutamate and aspartate transporter subunit [Escherichia coli O157:H7 str. EC4024] gi|208805792|ref|ZP_03248129.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC4206] gi|208816032|ref|ZP_03257211.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC4045] gi|208823216|ref|ZP_03263534.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC4042] gi|209399444|ref|YP_002269290.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC4115] gi|209917916|ref|YP_002292000.1| glutamate and aspartate transporter subunit [Escherichia coli SE11] gi|254791819|ref|YP_003076656.1| glutamate and aspartate transporter subunit [Escherichia coli O157:H7 str. TW14359] gi|261224124|ref|ZP_05938405.1| glutamate and aspartate transporter subunit, periplasmic-binding component of ABC superfamily protein [Escherichia coli O157:H7 str. FRIK2000] gi|261257818|ref|ZP_05950351.1| glutamate and aspartate transporter subunit, periplasmic-binding component of ABC superfamily protein [Escherichia coli O157:H7 str. FRIK966] gi|307312629|ref|ZP_07592261.1| extracellular solute-binding protein family 3 [Escherichia coli W] gi|309786318|ref|ZP_07680944.1| glutamate/aspartate periplasmic-binding protein [Shigella dysenteriae 1617] gi|12513562|gb|AAG54989.1|AE005244_7 putative periplasmic binding transport protein [Escherichia coli O157:H7 str. EDL933] gi|13360152|dbj|BAB34117.1| putative periplasmic binding transport protein [Escherichia coli O157:H7 str. Sakai] gi|30040402|gb|AAP16134.1| putative periplasmic binding transport protein [Shigella flexneri 2a str. 2457T] gi|56383255|gb|AAN42263.2| putative periplasmic binding transport protein [Shigella flexneri 2a str. 301] gi|81240081|gb|ABB60791.1| putative periplasmic binding transport protein [Shigella dysenteriae Sd197] gi|110614244|gb|ABF02911.1| putative periplasmic binding transport protein [Shigella flexneri 5 str. 8401] gi|187767185|gb|EDU31029.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC4196] gi|188013872|gb|EDU51994.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC4113] gi|189002825|gb|EDU71811.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC4076] gi|189354868|gb|EDU73287.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC4401] gi|189363489|gb|EDU81908.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC4486] gi|189373621|gb|EDU92037.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC869] gi|189375561|gb|EDU93977.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC508] gi|208725593|gb|EDZ75194.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC4206] gi|208732680|gb|EDZ81368.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC4045] gi|208737409|gb|EDZ85093.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC4042] gi|209160844|gb|ACI38277.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC4115] gi|209776908|gb|ACI86766.1| putative periplasmic binding transport protein [Escherichia coli] gi|209776910|gb|ACI86767.1| putative periplasmic binding transport protein [Escherichia coli] gi|209776912|gb|ACI86768.1| putative periplasmic binding transport protein [Escherichia coli] gi|209776914|gb|ACI86769.1| putative periplasmic binding transport protein [Escherichia coli] gi|209776916|gb|ACI86770.1| putative periplasmic binding transport protein [Escherichia coli] gi|209911175|dbj|BAG76249.1| glutamate/aspartate ABC transporter substrate binding component [Escherichia coli SE11] gi|254591219|gb|ACT70580.1| glutamate and aspartate transporter subunit, periplasmic-binding component of ABC superfamily [Escherichia coli O157:H7 str. TW14359] gi|306907331|gb|EFN37836.1| extracellular solute-binding protein family 3 [Escherichia coli W] gi|308925712|gb|EFP71193.1| glutamate/aspartate periplasmic-binding protein [Shigella dysenteriae 1617] gi|313649699|gb|EFS14123.1| glutamate/aspartate periplasmic-binding protein [Shigella flexneri 2a str. 2457T] gi|315059910|gb|ADT74237.1| glutamate and aspartate transporter subunit [Escherichia coli W] gi|320193061|gb|EFW67701.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Escherichia coli O157:H7 str. EC1212] gi|320638106|gb|EFX07870.1| glutamate and aspartate transporter subunit [Escherichia coli O157:H7 str. G5101] gi|320643510|gb|EFX12680.1| glutamate and aspartate transporter subunit [Escherichia coli O157:H- str. 493-89] gi|320648845|gb|EFX17472.1| glutamate and aspartate transporter subunit [Escherichia coli O157:H- str. H 2687] gi|320654429|gb|EFX22476.1| glutamate and aspartate transporter subunit [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320660111|gb|EFX27641.1| glutamate and aspartate transporter subunit [Escherichia coli O55:H7 str. USDA 5905] gi|320664909|gb|EFX32044.1| glutamate and aspartate transporter subunit [Escherichia coli O157:H7 str. LSU-61] gi|323184990|gb|EFZ70357.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli 1357] gi|323379526|gb|ADX51794.1| extracellular solute-binding protein family 3 [Escherichia coli KO11] gi|326341405|gb|EGD65197.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Escherichia coli O157:H7 str. 1044] gi|326345815|gb|EGD69554.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Escherichia coli O157:H7 str. 1125] Length = 302 Score = 39.3 bits (90), Expect = 0.91, Method: Compositional matrix adjust. Identities = 35/155 (22%), Positives = 62/155 (40%), Gaps = 6/155 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 S L I K G + G V F+ G+ D+ A+ A+ + P +++ Sbjct: 30 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ AF + G + K I Sbjct: 90 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQA--AFSDTIFVVGTRLLTKKGGDIKD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + L G ++ V +GTT+E+ L + M I Sbjct: 148 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRII 182 >gi|170020988|ref|YP_001725942.1| glutamate and aspartate transporter subunit [Escherichia coli ATCC 8739] gi|188495638|ref|ZP_03002908.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli 53638] gi|169755916|gb|ACA78615.1| extracellular solute-binding protein family 3 [Escherichia coli ATCC 8739] gi|188490837|gb|EDU65940.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli 53638] Length = 302 Score = 39.3 bits (90), Expect = 0.91, Method: Compositional matrix adjust. Identities = 35/155 (22%), Positives = 62/155 (40%), Gaps = 6/155 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 S L I K G + G V F+ G+ D+ A+ A+ + P +++ Sbjct: 30 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ AF + G + K I Sbjct: 90 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQA--AFSDTIFVVGTRLLTKKGGDIKD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + L G ++ V +GTT+E+ L + M I Sbjct: 148 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRII 182 >gi|206563061|ref|YP_002233824.1| glutamine ABC transporter periplasmic protein [Burkholderia cenocepacia J2315] gi|198039101|emb|CAR55064.1| periplasmic glutamine-binding protein [Burkholderia cenocepacia J2315] Length = 250 Score = 39.3 bits (90), Expect = 0.93, Method: Compositional matrix adjust. Identities = 42/163 (25%), Positives = 63/163 (38%), Gaps = 11/163 (6%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 L G +T + F E K + GFD+D ++ D K P++ ALQ++ Sbjct: 28 LVVGTDTSFMPF-EFKQGDKYVGFDLDLWAEIAK---DQGWKYTIQPMDFAGLIPALQTQ 83 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDG-QGFIMHKKKGISSVSQLSGASICVQAGT 154 ID+ T+ E + F Y G + I S+ L+G I + GT Sbjct: 84 NIDVALSGM--TIKEERKKAIDFSAPYYDSGLAAMVQAGNTSIKSIDDLNGKVIAAKTGT 141 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 T D+ KAH F +++ A A R DA D Sbjct: 142 AT----IDWIKAHLKPKEVRQFPNIDQAYLALEAGRVDAAMHD 180 >gi|71737270|ref|YP_272645.1| cystine transporter subunit [Pseudomonas syringae pv. phaseolicola 1448A] gi|71557823|gb|AAZ37034.1| cystine ABC transporter, periplasmic cystine binding protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|320322114|gb|EFW78210.1| cystine transporter subunit [Pseudomonas syringae pv. glycinea str. B076] gi|320330786|gb|EFW86760.1| cystine transporter subunit [Pseudomonas syringae pv. glycinea str. race 4] gi|330872001|gb|EGH06150.1| cystine transporter subunit [Pseudomonas syringae pv. glycinea str. race 4] Length = 265 Score = 39.3 bits (90), Expect = 0.93, Method: Compositional matrix adjust. Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 11/211 (5%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L IK G L G+ F+ V NG GF+V+F AL+ + +KIQ P Sbjct: 33 LQKIKDSGTLNVGLEGTYPPFSFVDENGKLTGFEVEFSEALAKEL-GVKAKIQ--PSKWD 89 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSG 145 AL SK++D++ + R+ + P T Q ++ K I + L+G Sbjct: 90 GILAALDSKRLDVVINQVTISEERKKKYDFS-EPYTVSGIQALVLKKNADTIKTAKDLTG 148 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 + V GT E L + +K + +++++ R DA + L AL+ Sbjct: 149 KKVGVGLGTNYEQWLKENVPGAIVKTYDDDPSKIQDLSVG----RIDAIL--VDRLAALE 202 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + ++ V D S+ A+ +G+ E Sbjct: 203 MATKTKNKLVPAGDAFSRQESGIALRKGEPE 233 >gi|257488015|ref|ZP_05642056.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|330891101|gb|EGH23762.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. mori str. 301020] gi|331008689|gb|EGH88745.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 266 Score = 39.3 bits (90), Expect = 0.94, Method: Compositional matrix adjust. Identities = 37/153 (24%), Positives = 60/153 (39%), Gaps = 10/153 (6%) Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 KG +V+ + + D + L N R LQ ++D+L N +WT R LG Sbjct: 51 KGVNVELAEDIGKRLGVDVELVSVLTAN---RVQFLQQGKVDLLIANMEWTPERGQLLGS 107 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 P G ++ K I+ L G +C G++ L ++ ++K F Sbjct: 108 VPTPFYRVGGTAAVLKDSK-ITRWEDLKGQPVCTSQGSSYIKALTEF--GADIK----AF 160 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 + E A R + C A D + + L ND Sbjct: 161 KSSSESLLALRGNNCVAAVHDATLVNPLLAGND 193 >gi|168462508|ref|ZP_02696439.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195634303|gb|EDX52655.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 266 Score = 39.3 bits (90), Expect = 0.94, Method: Compositional matrix adjust. Identities = 49/224 (21%), Positives = 91/224 (40%), Gaps = 12/224 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 SF+ + +L +K+RG L G+ F+ +G GF+VDF AL+ + K Sbjct: 27 SFA-DEGLLNKVKERGTLLVGLEGTYPPFSFQGEDGKLTGFEVDFAEALAKHL---GVKA 82 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-I 137 P +L +K+ID++ + +R+ + P T Q + +G I Sbjct: 83 LLKPTKWDGILASLDAKRIDVVINQVTISDVRKKKYDFS-TPYTVSGVQALVKKGNEGTI 141 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + + L G + V GT E L + + +++ + + +++ R R DA Sbjct: 142 KTAADLQGKKVGVGLGTNYEEWLRQHVQGVDIRTYDDDPTKYQDL----RVGRIDAIL-- 195 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + L AL L + D S+ A+ +G+ + V Sbjct: 196 VDRLAALDLVKKTKGTLAVTGDAFSRQESGVALRKGNEDLLKAV 239 >gi|70733754|ref|YP_257394.1| cystine transporter subunit [Pseudomonas fluorescens Pf-5] gi|68348053|gb|AAY95659.1| cystine ABC transporter, periplasmic cystine binding protein [Pseudomonas fluorescens Pf-5] Length = 265 Score = 39.3 bits (90), Expect = 0.97, Method: Compositional matrix adjust. Identities = 41/165 (24%), Positives = 65/165 (39%), Gaps = 13/165 (7%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L IK G + G+ F+ V NG GF+V+F AL++ + K++ P Sbjct: 33 LQKIKDAGVINVGLEGTYPPFSYVDENGKLTGFEVEFSEALANKL---GVKVKLQPTKWD 89 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSG 145 AL+SK++D + + R+ + P T Q K +G + + L G Sbjct: 90 GILAALESKRLDAVVNQVTISEERKKKYDFSI-PYTVSGIQALTQKKDEGKFKTAADLGG 148 Query: 146 ASICVQAGTTTELTLAD--------YFKAHNMKYHPIVFERVEEI 182 + V GT E L D + KY + R+E I Sbjct: 149 HKVGVGLGTNYEQWLKDNVPTAIIKTYDDDPTKYQDLRVGRIEAI 193 >gi|15600269|ref|NP_253763.1| binding protein component of ABC transporter [Pseudomonas aeruginosa PAO1] gi|116053223|ref|YP_793545.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa UCBPP-PA14] gi|218894175|ref|YP_002443044.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa LESB58] gi|254238217|ref|ZP_04931540.1| hypothetical protein PACG_04343 [Pseudomonas aeruginosa C3719] gi|254244042|ref|ZP_04937364.1| hypothetical protein PA2G_04876 [Pseudomonas aeruginosa 2192] gi|313110115|ref|ZP_07796017.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa 39016] gi|9951369|gb|AAG08461.1|AE004920_11 probable binding protein component of ABC transporter [Pseudomonas aeruginosa PAO1] gi|115588444|gb|ABJ14459.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas aeruginosa UCBPP-PA14] gi|126170148|gb|EAZ55659.1| hypothetical protein PACG_04343 [Pseudomonas aeruginosa C3719] gi|126197420|gb|EAZ61483.1| hypothetical protein PA2G_04876 [Pseudomonas aeruginosa 2192] gi|218774403|emb|CAW30220.1| probable binding protein component of ABC transporter [Pseudomonas aeruginosa LESB58] gi|310882519|gb|EFQ41113.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa 39016] Length = 266 Score = 39.3 bits (90), Expect = 0.97, Method: Compositional matrix adjust. Identities = 53/223 (23%), Positives = 94/223 (42%), Gaps = 14/223 (6%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 A + D KRG L+ G++ + F G GF+VD +A++ ++ K++ + Sbjct: 24 AGAVEDAVKRGTLRVGMDPTYMPFEMTNKRGQIIGFEVDLLKAMAKSM---GVKLELVST 80 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVS 141 + AL + + D++ + TL +E +L L F GQ ++ K + I S Sbjct: 81 SYDGIIPALLTDKFDMIG--SGMTLTQERNLRLNFSEPFIVVGQTLLVRKELEGKIKSYK 138 Query: 142 QLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L+ SI + GTT E+ KYH F+ E + DA+ D S Sbjct: 139 DLNDPQYSITSKIGTTGEIVARKLI--SKAKYHG--FDNEPEAVMDVVNGKADAFIYD-S 193 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + ++ + V L + PLA + +GD + N ++ Sbjct: 194 PYNVVAVSKFGAGKLVYLDQPFTYEPLAFGLKKGDYDSINFIN 236 >gi|89073559|ref|ZP_01160081.1| arginine ABC transporter, periplasmic arginine-binding protein [Photobacterium sp. SKA34] gi|89050586|gb|EAR56072.1| arginine ABC transporter, periplasmic arginine-binding protein [Photobacterium sp. SKA34] Length = 242 Score = 39.3 bits (90), Expect = 0.98, Method: Compositional matrix adjust. Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 19/147 (12%) Query: 24 ASILGDIKKRGF---LKCGINTGLVGFAEVKANGDWKGFDVDFCRAL-----SSAIFDDP 75 ASI+G + + +K + F + N +GFDVD +AL ++ F + Sbjct: 7 ASIIGLVSSQAMAQDIKFAMEATYAPFEYMDENNQIQGFDVDIAKALCKEMDATCTFHNQ 66 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 S +P AL+ K+ D D T R+ + +F Y + GFI K K Sbjct: 67 SFDSLIP--------ALKFKRYDAAISAMDITEARQQQV--SFTQPYYDNAAGFISIKGK 116 Query: 136 GISSVSQLSGASICVQAGTTTELTLAD 162 ++ V+ L+G + VQ G+T + L D Sbjct: 117 -VADVAALNGKRVGVQNGSTHQNYLTD 142 >gi|119387649|ref|YP_918683.1| extracellular solute-binding protein [Paracoccus denitrificans PD1222] gi|119378224|gb|ABL72987.1| amino acid ABC transporter substrate-binding protein, PAAT family [Paracoccus denitrificans PD1222] Length = 266 Score = 39.3 bits (90), Expect = 0.98, Method: Compositional matrix adjust. Identities = 45/212 (21%), Positives = 88/212 (41%), Gaps = 11/212 (5%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L DI+ RG + G++ G F V + + G DVD R L+ + + + P N Sbjct: 27 LSDIRDRGTINIGVDIGQAPFGMVDGSMNQTGSDVDTARKLAEDLGVKLNVVSVAPAN-- 84 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLS 144 R L + ++D++ + T R+ + + +P + ++ G +S + L Sbjct: 85 -RIPFLLTGKVDVVVASFSITEERKKQVDFS-KPYAVSE---VVVATTGGLELSGPADLE 139 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G I V +T + + D A+++K + ++ A + + D Y S L + Sbjct: 140 GRQIAVTRASTNDTLITDAIAANDVKATIVRYDDNAMTTNAVLSGQHDVYVVAQSLLVPI 199 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 N PS + ++ PLA + + + E Sbjct: 200 NEAN--PSRKIEPQFVLRTYPLAIGLRKNEPE 229 >gi|293396871|ref|ZP_06641145.1| arginine ABC superfamily ATP binding cassette transporter, binding protein [Serratia odorifera DSM 4582] gi|291420342|gb|EFE93597.1| arginine ABC superfamily ATP binding cassette transporter, binding protein [Serratia odorifera DSM 4582] Length = 243 Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust. Identities = 40/164 (24%), Positives = 69/164 (42%), Gaps = 28/164 (17%) Query: 47 FAEVKANGDWKGFDVDFCRAL-----SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101 F V A+ +GFDVD A+ ++ F + + +P +L+ K+ D + Sbjct: 34 FEFVGADNKIQGFDVDLANAMCKEMQATCTFTNQAFDSLIP--------SLKFKRFDAVM 85 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 D T RE + L +P Y+D + +K ++ V+ L G + VQ GTT + L Sbjct: 86 AGMDITPEREKQV-LFTKP--YYDNSALFIAQKGKVADVASLKGKKVGVQNGTTHQKFLT 142 Query: 162 DYFKAHNMKYHP----IVFERVEEIDAAYRAHRCDAYTGDISAL 201 D HP + ++ + + R DA GD + + Sbjct: 143 D--------KHPEITTVPYDSYQNAILDLKNGRVDAVFGDTAVV 178 >gi|170697811|ref|ZP_02888897.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] gi|170137313|gb|EDT05555.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] Length = 250 Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust. Identities = 45/166 (27%), Positives = 64/166 (38%), Gaps = 17/166 (10%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 L G +T + F E K + GFD+D ++ D K P++ ALQ++ Sbjct: 28 LVVGTDTSFMPF-EFKQGDKYVGFDLDLWAEIAK---DQGWKYTIQPMDFAGLIPALQTQ 83 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDG-QGFIMHKKKGISSVSQLSGASICVQAGT 154 ID+ T+ E + F Y G + I S+ L+G I + GT Sbjct: 84 NIDVALSGM--TIREERKKAIDFSAPYYDSGLAAMVQSGNTTIKSIDDLNGKVIAAKTGT 141 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAY---RAHRCDAYTGD 197 T D+ KAH P + ID AY A R DA D Sbjct: 142 AT----IDWIKAH---LKPKEIRQFPNIDQAYLALEAGRVDAAMHD 180 >gi|257481900|ref|ZP_05635941.1| cystine transporter subunit [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331009533|gb|EGH89589.1| cystine transporter subunit [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 265 Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust. Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 11/211 (5%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L IK G L G+ F+ V NG GF+V+F AL+ + +KIQ P Sbjct: 33 LQKIKDSGTLNVGLEGTYPPFSFVDENGKLTGFEVEFSEALAKEL-GVKAKIQ--PSKWD 89 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSG 145 AL SK++D++ + R+ + P T Q ++ K I + L+G Sbjct: 90 GILAALDSKRLDVVINQVTISEERKKKYDFS-EPYTVSGIQALVLKKNADTIKTAKDLTG 148 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 + V GT E L + +K + +++++ R DA + L AL+ Sbjct: 149 KKVGVGLGTNYEQWLKENVPGAIVKTYDDDPSKIQDLSVG----RIDAIL--VDRLAALE 202 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + ++ V D S+ A+ +G+ E Sbjct: 203 MATKTKNKLVPAGDAFSRQESGIALRKGEPE 233 >gi|295399081|ref|ZP_06809063.1| extracellular solute-binding protein family 3 [Geobacillus thermoglucosidasius C56-YS93] gi|312110315|ref|YP_003988631.1| extracellular solute-binding protein family 3 [Geobacillus sp. Y4.1MC1] gi|294978547|gb|EFG54143.1| extracellular solute-binding protein family 3 [Geobacillus thermoglucosidasius C56-YS93] gi|311215416|gb|ADP74020.1| extracellular solute-binding protein family 3 [Geobacillus sp. Y4.1MC1] Length = 260 Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust. Identities = 39/160 (24%), Positives = 67/160 (41%), Gaps = 8/160 (5%) Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD + ++ + + + + ++ ALQS ++D + T R+ ++ Sbjct: 62 GFDVDLAKMITKEL---GYEFEIVDMDFNGLIPALQSGKVDFVLAGMTPTKDRKKNV--D 116 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F + Y + K GI +V L G ++ VQ G+ E K +MK Sbjct: 117 FSDVYYVSRNMIVSKKGSGIKTVKDLKGKTVGVQTGSIQEEEAKKIAKTVDMKLES--RN 174 Query: 178 RVEEIDAAYRAHRCD-AYTGDISALYALKLTNDRPSEHVI 216 R+ E+ +A R D A D A L+ +N + H I Sbjct: 175 RIPELIQEIQAGRFDAAIIEDTVAKGYLQTSNGKLEGHTI 214 >gi|227327385|ref|ZP_03831409.1| glutamate and aspartate transporter subunit [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 298 Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust. Identities = 35/155 (22%), Positives = 63/155 (40%), Gaps = 6/155 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 A L +K G + G V F+ G+ + + A+ D P+ +++ Sbjct: 26 AGTLKKVKDNGVIVIGHRESSVPFSYYDNTQKVVGYSQAYSDKIVEAVKKKLDAPNLQVK 85 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 LP+ ++ R LQ+ D +T L R+ AF + G + K G+ Sbjct: 86 LLPITSQNRIPLLQNGTFDFECGSTTNNLERQKQA--AFSNTIFVVGTRLLTKKDSGVKD 143 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 L+G ++ V +GTT+E+ L + +K I Sbjct: 144 FPDLAGKTVVVTSGTTSEVLLNKLNEEKQLKMRII 178 >gi|90578867|ref|ZP_01234677.1| arginine ABC transporter, periplasmic arginine-binding protein [Vibrio angustum S14] gi|90439700|gb|EAS64881.1| arginine ABC transporter, periplasmic arginine-binding protein [Vibrio angustum S14] Length = 242 Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust. Identities = 40/147 (27%), Positives = 64/147 (43%), Gaps = 19/147 (12%) Query: 24 ASILGDIKKRGF---LKCGINTGLVGFAEVKANGDWKGFDVDFCRAL-----SSAIFDDP 75 ASI+G + + +K + F + N +GFDVD +AL ++ F + Sbjct: 7 ASIIGLVSSQAMAQDIKFAMEATYAPFEYMDENNQIQGFDVDIAKALCKEMDATCTFHNQ 66 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 S +P AL+ K+ D D T R+ + +F Y + GFI K K Sbjct: 67 SFDSLIP--------ALKFKRYDAAISAMDITEARQQQV--SFTQPYYDNAAGFISIKGK 116 Query: 136 GISSVSQLSGASICVQAGTTTELTLAD 162 ++ V+ L G + VQ G+T + L D Sbjct: 117 -VTDVAALKGKRVGVQNGSTHQSYLTD 142 >gi|67923037|ref|ZP_00516530.1| hypothetical protein CwatDRAFT_3405 [Crocosphaera watsonii WH 8501] gi|67855116|gb|EAM50382.1| hypothetical protein CwatDRAFT_3405 [Crocosphaera watsonii WH 8501] Length = 72 Score = 38.9 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 2/59 (3%) Query: 7 VSILCLIIL--FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 +S+L +IL FF F ++L IK+ G L G+ + F V G W G+ VD Sbjct: 7 ISVLITLILCCFFPRFVLAETVLEKIKRTGELNAGVRKDAIPFCYVNNKGKWTGYSVDL 65 >gi|238788347|ref|ZP_04632141.1| Cystine-binding periplasmic protein [Yersinia frederiksenii ATCC 33641] gi|238723593|gb|EEQ15239.1| Cystine-binding periplasmic protein [Yersinia frederiksenii ATCC 33641] Length = 262 Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust. Identities = 50/209 (23%), Positives = 87/209 (41%), Gaps = 17/209 (8%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 V++ L S++ +L +K+RG L G+ F+ +G GF+VDF Sbjct: 10 MVAVALATGLNVKSYAA-GDLLDQVKERGTLIVGLEGTYPPFSFQGEDGKLTGFEVDFAN 68 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 AL+ + K + P +L+SK+ID+ + R+ + T + Sbjct: 69 ALAEHM---GVKAKITPTKWDGMLASLESKRIDVAINQVTISEERKKKYDFS----TPYT 121 Query: 126 GQGFIMHKKKG----ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 G + KKG + L G + V G+ E L D K +++ + + ++ Sbjct: 122 ISGIQVLTKKGNEGKFNKPEDLEGKKVGVGLGSNYEQWLRDNLKGVDIRTYDDDPTKYQD 181 Query: 182 IDAAYRAHRCDAYTGD-ISALYALKLTND 209 + R R DA D ++AL +K TND Sbjct: 182 L----RVGRTDAILVDRLAALDLVKKTND 206 >gi|291085702|ref|ZP_06353786.2| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Citrobacter youngae ATCC 29220] gi|291070188|gb|EFE08297.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Citrobacter youngae ATCC 29220] Length = 317 Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust. Identities = 45/225 (20%), Positives = 86/225 (38%), Gaps = 6/225 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 S L I K G + G V F+ G+ D+ A+ A+ + P +++ Sbjct: 45 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 104 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ AF + G + K I Sbjct: 105 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQA--AFSDTIFVVGTRLLAKKGGDIKD 162 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L G ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 163 FADLKGKAVVVTSGTTSEVLLHKLNEEQKMDMRIISAKDHGDSFRTLESGRAVAFMMDDA 222 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 L + +P I+ S+ + + D E+ ++ T Sbjct: 223 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPEFKKLMDDT 267 >gi|170020734|ref|YP_001725688.1| cationic amino acid ABC transporter, periplasmic binding protein [Escherichia coli ATCC 8739] gi|169755662|gb|ACA78361.1| cationic amino acid ABC transporter, periplasmic binding protein [Escherichia coli ATCC 8739] Length = 243 Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust. Identities = 50/203 (24%), Positives = 84/203 (41%), Gaps = 34/203 (16%) Query: 47 FAEVKANGDWKGFDVDFCRALSSAI-----FDDPSKIQYLPLNAKERFLALQSKQIDILS 101 F + AN GFDVD +AL I F + + +P +L+ ++++ + Sbjct: 34 FESIDANNQIVGFDVDLAQALCKEIDATCTFSNQAFDSLIP--------SLKFRRVEAVM 85 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 D T RE + L P Y+D + ++ +SV QL G + VQ GTT + + Sbjct: 86 AGMDITPEREKQV-LFTTP--YYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFI- 141 Query: 162 DYFKAHNMKYHP----IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 M HP + ++ + + R D GD +A+ L N+ P + Sbjct: 142 -------MDKHPEITTVPYDSYQNAKLDLQNGRIDGVFGD-TAVVTEWLKNN-PKLAAVG 192 Query: 218 PDIISK----SPLAPAIIQGDTE 236 + K + L A+ QG+TE Sbjct: 193 DKVTDKDYFGTGLGIAVRQGNTE 215 >gi|104784004|ref|YP_610502.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas entomophila L48] gi|95112991|emb|CAK17719.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas entomophila L48] Length = 266 Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust. Identities = 53/246 (21%), Positives = 98/246 (39%), Gaps = 14/246 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + +L + A + D KRG L+ G++ + F G+ GF+ Sbjct: 1 MMKKYLSRLLVGATALIAVTAAQAGAIDDAVKRGTLRVGMDPTYMPFEMTNKRGEIIGFE 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A++ ++ K++ + AL + + D + + TL +E +L L F Sbjct: 61 VDILKAMAKSM---GVKLETVSTAYDGIIPALLTDKFDFIG--SGMTLTQERNLRLNFSE 115 Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGAS--ICVQAGTTTELTLADYFKAHNMKYHPIVF 176 GQ ++ K+ I S L+ I + GTT E+ KYH Sbjct: 116 PFIVVGQTLLIRKELVGEIKSYKDLNNEKYRITSKLGTTGEMVSKKLI--GKAKYHGYDN 173 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E+ +D + DA+ D + + + + L + + PLA + +GD + Sbjct: 174 EQEAVMDVV--NGKADAFVYD-APYNVVAVEKAGAGKLAFLEEPFTYEPLAFGLKKGDYD 230 Query: 237 WYNIVS 242 N ++ Sbjct: 231 SINFIN 236 >gi|312883096|ref|ZP_07742827.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio caribbenthicus ATCC BAA-2122] gi|309369256|gb|EFP96777.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio caribbenthicus ATCC BAA-2122] Length = 279 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 25/95 (26%), Positives = 49/95 (51%), Gaps = 4/95 (4%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 F++ +++ SF+T L I +RG ++ G++T V +A GD GF++D + Sbjct: 17 FLAATVSVLVCSPSFATTTPNLDKINERGTIRVGMST-FVPWAMRNKQGDLIGFEIDVAK 75 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 L+ D K++++P AL +K+ D++ Sbjct: 76 RLAK---DSGWKVEFVPTAWDGIIPALLAKKFDVI 107 >gi|298485133|ref|ZP_07003229.1| Cystine-binding periplasmic protein precursor [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298160385|gb|EFI01410.1| Cystine-binding periplasmic protein precursor [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330886121|gb|EGH20022.1| cystine transporter subunit [Pseudomonas syringae pv. mori str. 301020] Length = 265 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 11/211 (5%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L IK G L G+ F+ V NG GF+V+F AL+ + +KIQ P Sbjct: 33 LQKIKDSGTLNVGLEGTYPPFSFVDENGKLTGFEVEFSEALAKEL-GVKAKIQ--PSKWD 89 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSG 145 AL SK++D++ + R+ + P T Q ++ K I + L+G Sbjct: 90 GILAALDSKRLDVVINQVTISEERKKKYDFS-EPYTVSGIQALVLKKNADTIKTAKDLTG 148 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 + V GT E L + +K + +++++ R DA + L AL+ Sbjct: 149 KKVGVGLGTNYEQWLKENVPGAIVKTYDDDPSKIQDLSVG----RIDAIL--VDRLAALE 202 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + ++ V D S+ A+ +G+ E Sbjct: 203 MATKTKNKLVPAGDAFSRQESGIALRKGEPE 233 >gi|284992299|ref|YP_003410853.1| family 3 extracellular solute-binding protein [Geodermatophilus obscurus DSM 43160] gi|284065544|gb|ADB76482.1| extracellular solute-binding protein family 3 [Geodermatophilus obscurus DSM 43160] Length = 296 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 45/222 (20%), Positives = 86/222 (38%), Gaps = 10/222 (4%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S + ++ + G + G GF G +GFDV+ + ++ + P +I++ Sbjct: 48 STMAELAEAGTITVGTKFDQPGFGLANPQGVPEGFDVEVTKIIAGELGIAPEEIEWKETV 107 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQ 142 + R +Q+ +DI+ +T+ + F Y GQ ++ I Sbjct: 108 SANRESFIQNGDVDIVVAT--YTINDARKQLIDFAGPYYVAGQDIMVATGNPLAIEGPDD 165 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+G +C G+T + D + + +F+ + A R + DA T D L Sbjct: 166 LAGKRVCSVEGSTPAQNIRDNYPEAQL----TLFDVYSKCADALRNGQVDAVTTDNVILT 221 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 L E V P ++ P + +GD E+ ++ T Sbjct: 222 GLVQGGQGAFELVGNP--FTQEPYGIGLTKGDDEFRGFINDT 261 >gi|239620726|ref|ZP_04663757.1| glutamate-binding protein of ABC transporter system [Bifidobacterium longum subsp. infantis CCUG 52486] gi|312132337|ref|YP_003999676.1| hisj1 [Bifidobacterium longum subsp. longum BBMN68] gi|239516302|gb|EEQ56169.1| glutamate-binding protein of ABC transporter system [Bifidobacterium longum subsp. infantis CCUG 52486] gi|311773858|gb|ADQ03346.1| HisJ1 [Bifidobacterium longum subsp. longum BBMN68] Length = 279 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 33/168 (19%), Positives = 73/168 (43%), Gaps = 5/168 (2%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILG-DIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + F C +I + + S+ + G ++ GI G K +G + GFD Sbjct: 3 FTNTFKRKACRVIAALAAVACTMSLAACGADETGKIRIGIKFDQPGLG-FKKSGTYVGFD 61 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + ++ + +I + +K+R +Q+ +D++ +++ E ++F Sbjct: 62 VDVAKYVAKKLGYSEDQIIWKEAPSKQREAMIQNGDVDMILAT--YSITDERKKAVSFAG 119 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 + GQ ++ K I+ L+G +C G+T+ T+ + F + Sbjct: 120 PYFVAGQDLLVRKDDNSINGPEDLNGKRLCSVTGSTSAATVKEKFASE 167 >gi|225352764|ref|ZP_03743787.1| hypothetical protein BIFPSEUDO_04394 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225156371|gb|EEG69940.1| hypothetical protein BIFPSEUDO_04394 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 275 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 34/159 (21%), Positives = 68/159 (42%), Gaps = 9/159 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 ++ C F S G G ++ GI G K +G + GFDVD + Sbjct: 11 IATFCACACVFA-----VSACGADDADGKIRVGIKFDQPGLG-FKKSGTYVGFDVDVAKY 64 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 ++ + +I + +K+R LQ+ +D + +++ E ++F + G Sbjct: 65 IAKKLGYSEDQIVWKEAPSKQREAMLQNGDVDFIVAT--YSITDERKKVVSFAGPYFVAG 122 Query: 127 QGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYF 164 Q ++ K + I+ L+G +C G+T+ +T+ + F Sbjct: 123 QDLLVRKDETSINGPEDLNGKRLCSVTGSTSAVTVKEKF 161 >gi|189438884|ref|YP_001953965.1| amino acid ABC transporter periplasmic protein [Bifidobacterium longum DJO10A] gi|189427319|gb|ACD97467.1| ABC-type amino acid transport system periplasmic component [Bifidobacterium longum DJO10A] gi|291516218|emb|CBK69834.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [Bifidobacterium longum subsp. longum F8] Length = 279 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 33/168 (19%), Positives = 73/168 (43%), Gaps = 5/168 (2%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILG-DIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + F C +I + + S+ + G ++ GI G K +G + GFD Sbjct: 3 FTNTFKRKACRVIAALAAVACTMSLAACGADETGKIRIGIKFDQPGLG-FKKSGTYVGFD 61 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + ++ + +I + +K+R +Q+ +D++ +++ E ++F Sbjct: 62 VDVAKYVAKKLGYSEDQIIWKEAPSKQREAMIQNGDVDMILAT--YSITDERKKAVSFAG 119 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 + GQ ++ K I+ L+G +C G+T+ T+ + F + Sbjct: 120 PYFVAGQDLLVRKDDNSINGPEDLNGKRLCSVTGSTSAATVKEKFASE 167 >gi|50119771|ref|YP_048938.1| putative amino acid-binding periplasmic protein [Pectobacterium atrosepticum SCRI1043] gi|49610297|emb|CAG73741.1| putative amino acid-binding periplasmic protein [Pectobacterium atrosepticum SCRI1043] Length = 260 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 32/127 (25%), Positives = 56/127 (44%), Gaps = 7/127 (5%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 K L+ G++ F + NG+ GFD++ A+ +I +K Y+ + A Sbjct: 23 KSDILRIGVDLTYPPFQSMSTNGNPSGFDIEVTDAICQSI---NAKCDYIVNTFDSQIPA 79 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICV 150 L SK+ID+++ + R+ + F + + K+ I +V L G +I V Sbjct: 80 LLSKKIDVIA---PLGVTRKRRESIDFSNYVFHAPTKLVARKEANILPNVDVLRGKNIAV 136 Query: 151 QAGTTTE 157 Q GT E Sbjct: 137 QQGTIQE 143 >gi|308186180|ref|YP_003930311.1| glutamine-binding periplasmic protein precursor glnH [Pantoea vagans C9-1] gi|308056690|gb|ADO08862.1| Glutamine-binding periplasmic protein precursor glnH [Pantoea vagans C9-1] Length = 248 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 50/197 (25%), Positives = 85/197 (43%), Gaps = 30/197 (15%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 VS+ L + F S S+ A+ +K+ L +T V F E K + GFDVD A Sbjct: 7 VSVAALALAF--SLSSTAA-----EKK--LVVATDTAFVPF-EFKQGDKYVGFDVDLWDA 56 Query: 67 LSSAIFDDPSKIQYL--PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 ++ + K+ Y P++ ALQ++ +D+ T+ E + F Y Sbjct: 57 IAKEL-----KLDYTLKPMDFSGIIPALQTRNVDLALAGI--TITEERKKAIEFSDGYYK 109 Query: 125 DG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 G Q + + + I +S L+G + V++GT + K+ +++ P ID Sbjct: 110 SGLQVMVRNNENNIKGISDLNGKVVAVKSGTGSVEYAKANIKSKDLRQFP-------NID 162 Query: 184 AAYR---AHRCDAYTGD 197 +AY +R DA D Sbjct: 163 SAYMELGTNRADAVLHD 179 >gi|227114975|ref|ZP_03828631.1| glutamate and aspartate transporter subunit [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 298 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 35/155 (22%), Positives = 63/155 (40%), Gaps = 6/155 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 A L +K G + G V F+ G+ + + A+ D P+ +++ Sbjct: 26 AGTLKKVKDNGVIVIGHRESSVPFSYYDNTQKVVGYSQAYSDKIVEAVKKKLDAPNLQVK 85 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 LP+ ++ R LQ+ D +T L R+ AF + G + K G+ Sbjct: 86 LLPITSQNRIPLLQNGTFDFECGSTTNNLERQKQA--AFSNTIFVVGTRLLTKKDSGVKD 143 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 L+G ++ V +GTT+E+ L + +K I Sbjct: 144 FPDLAGKTVVVTSGTTSEVLLNKLNEEKQLKMRII 178 >gi|270290757|ref|ZP_06196981.1| glutamine transport system substrate-binding protein [Pediococcus acidilactici 7_4] gi|270280817|gb|EFA26651.1| glutamine transport system substrate-binding protein [Pediococcus acidilactici 7_4] Length = 277 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 43/195 (22%), Positives = 83/195 (42%), Gaps = 14/195 (7%) Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 +T L G +VK + KGFD+D +AL+ + ++ +++ + ++ R L++ +D + Sbjct: 51 DTKLFGLMDVK-DSQIKGFDIDIAKALTKQMLGKDAQAEFVQVTSQTRIPLLKNGNLDAV 109 Query: 101 SRNTDWTLLREISLGLAFRPITYFD-GQGFIMHKKKGISSVSQLS--GASICVQAGTTTE 157 T R+ + + +YFD GQ ++ K I SV L+ G + G + Sbjct: 110 IATMTITKDRQKVVDFS---DSYFDAGQSLLVPKDSKIHSVRDLNHPGTKVIGVVGANS- 165 Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 K K I + + A ++ + A T D L+ + + N + ++ Sbjct: 166 ---VSNVKKFAPKAQVIQLQDYAQALTALKSGQGAALTTDNGILFGMAVDN---PQFKVV 219 Query: 218 PDIISKSPLAPAIIQ 232 +K P AI Q Sbjct: 220 GKAFTKEPYGIAINQ 234 >gi|300311002|ref|YP_003775094.1| amino acid ABC transporter/signal transduction system periplasmic protein/domain-containing protein [Herbaspirillum seropedicae SmR1] gi|300073787|gb|ADJ63186.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain protein [Herbaspirillum seropedicae SmR1] Length = 279 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 51/243 (20%), Positives = 94/243 (38%), Gaps = 15/243 (6%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCR 65 S+L F + A L +I+ RG L C N +GF + ++ GFDVD C Sbjct: 15 SLLVACAALFPGLA-QADRLAEIQARGTLVCATLANNEPLGFPDPQSR-QVVGFDVDMCA 72 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 A++ + +++ + + R AL Q D++S +T RE + + F Y + Sbjct: 73 AVARRLG---VQMEQKSVTVEGRLPALIEGQADLVSAALGYT--RERARQIDFTASHYQN 127 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 I+ G++ +S L+ I +T E + ++ F + A Sbjct: 128 PIKLIVQSDSGLNLISDLADKRISANRSSTPEQAVRRVLPKAMLQ----TFADTPQAFLA 183 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 R D IS ++ N+ + +S P A + +G+ + V+ Sbjct: 184 LAQGRADGLA--ISMPSGIRFVNESAGRFKFVEGALSWEPTALGVKKGERRLRDAVNAAL 241 Query: 246 YAM 248 A+ Sbjct: 242 AAL 244 >gi|270261144|ref|ZP_06189417.1| hypothetical protein SOD_a03690 [Serratia odorifera 4Rx13] gi|270044628|gb|EFA17719.1| hypothetical protein SOD_a03690 [Serratia odorifera 4Rx13] Length = 243 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 6/116 (5%) Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F + A +GFDVD AL I D + + +L+ K+ D + D Sbjct: 34 FEFIDAGNKIQGFDVDLANALCKEIQADCT---FTNQAFDSLIPSLKFKRFDAVMAGMDI 90 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162 T RE + L +P Y+D + +K ++ V+ L G + VQ GTT + L D Sbjct: 91 TPEREKQV-LFTKP--YYDNSALFVAQKGKVADVAALKGKKVGVQNGTTHQKYLTD 143 >gi|256375586|ref|YP_003099246.1| extracellular solute-binding protein family 3 [Actinosynnema mirum DSM 43827] gi|255919889|gb|ACU35400.1| extracellular solute-binding protein family 3 [Actinosynnema mirum DSM 43827] Length = 295 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 6/129 (4%) Query: 30 IKKRGFLKCGINTGL--VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 +K RG + G+ +GF + N + GFDVD R +++ + D SKI+Y + + Sbjct: 52 MKSRGKVVIGVKEDQPNLGFKDATTN-KYSGFDVDIARLVAAKLGFDESKIEYKAIASAG 110 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGA 146 R AL + +D +T+ +AF + GQ ++ K I+ L G Sbjct: 111 REQALINGDVDYYVGT--YTINDGRKEKIAFAGPYFVAGQDLLVRKDDASITGKDTLMGK 168 Query: 147 SICVQAGTT 155 +C G+T Sbjct: 169 KVCSVTGST 177 >gi|254303609|ref|ZP_04970967.1| ABC superfamily ATP binding cassette transporter binding protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323801|gb|EDK89051.1| ABC superfamily ATP binding cassette transporter binding protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 253 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 43/182 (23%), Positives = 82/182 (45%), Gaps = 17/182 (9%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 +L + I+ S++ N + I KRG L G + F ++ NG+ KG+D++ + ++ Sbjct: 7 VLLITIVSVISYANNDGV-EKILKRGVLYVGTTSDYKPFTYIE-NGEHKGYDIEVAKLIA 64 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 + K++++P K LQ+ + DI T R+ + P F G+ Sbjct: 65 KEL---GVKVEFVPTTWKTLLDDLQAGKFDIAMGGITRTTKRQTICNMT-NPYLVF-GKC 119 Query: 129 FIMHK--KKGISSVSQLS--GASICVQAGTTTELTLADYF-KAHNMKYH-----PIVFER 178 F++ K K +S+ ++ + V G T E + +Y KA ++Y P+ E+ Sbjct: 120 FLVRKGDKNKYNSLEAVNKPNVRVGVNIGGTNEALVNEYIAKATVIRYKNNLDVPVALEK 179 Query: 179 VE 180 E Sbjct: 180 GE 181 >gi|300908216|ref|ZP_07125682.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri SD2112] gi|300894643|gb|EFK87999.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri SD2112] Length = 289 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 34/151 (22%), Positives = 72/151 (47%), Gaps = 8/151 (5%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 I++R + G++ V + NG G+DVD RA+ K+ + P++ + Sbjct: 45 IERRKRVIVGLDDSFVPMDFRQKNGKLVGYDVDLARAVFKQY---GIKVDFQPIDWSMKE 101 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 L++ ID+L +++ + +AF + Q + KK I +++ ++G ++ Sbjct: 102 TELKNGTIDLLW--NGYSVNPSRAKKVAFSRYYLENRQILVTKKKSNIKNLNGMTGKTLG 159 Query: 150 VQAGTTTELTLADYFK--AHNMKYH-PIVFE 177 VQ G+T L + K +K+H P++++ Sbjct: 160 VQNGSTGVTVLDEKPKLLKDKIKHHTPVLYD 190 >gi|55378505|ref|YP_136355.1| amino acid ABC transporter amino acid-binding protein [Haloarcula marismortui ATCC 43049] gi|55231230|gb|AAV46649.1| amino acid ABC transporter amino acid-binding protein [Haloarcula marismortui ATCC 43049] Length = 266 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 36/129 (27%), Positives = 56/129 (43%), Gaps = 7/129 (5%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 + G G F E+K +G+ GFD+D A+ D + + K AL ++ Sbjct: 42 ITAGTAPGFPPF-EMKQDGELVGFDIDLLEAVIDET--DYTLAGWEEFEFKSLIPALTNE 98 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAG 153 ID+++ T+ E + F Y Q ++ + S S+S LSG I Q G Sbjct: 99 NIDVVAAG--MTINDERDETIDFTDPYYSSNQAIVVREDGDFSPASLSDLSGRPIGAQKG 156 Query: 154 TTTELTLAD 162 TT E T+ D Sbjct: 157 TTGETTVQD 165 >gi|269796952|ref|YP_003316407.1| amino acid-binding protein [Sanguibacter keddieii DSM 10542] gi|269099137|gb|ACZ23573.1| amino acid-binding protein [Sanguibacter keddieii DSM 10542] Length = 290 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 44/227 (19%), Positives = 91/227 (40%), Gaps = 13/227 (5%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 S + + + G + G F V +G GFDV+ + ++ + P I++ Sbjct: 44 GSTMARLAEAGTMTVGTKFDQPLFGLVGPDGTPVGFDVEIAKIIAGELGIAPDDIEWTET 103 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVSQ 142 + R +Q ++DI+ +T+ + + F Y GQ +++ I S Sbjct: 104 VSANRETFIQEDRVDIVVAT--YTINDDRKQVIDFAGPYYLAGQSLMVNADDDSIQSEDD 161 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD--ISA 200 L+G +C G+T + + F +++ F + + R + D T D I A Sbjct: 162 LAGKIVCSAEGSTPAKNIEENFPDADLR----TFSQYTDCLDPLRNGQVDVLTTDNVILA 217 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 Y + P + + + ++ P + + DT++ N ++ T A Sbjct: 218 GYVAE----SPDDFKLAGEQFTEEPYGIGLKKDDTDFRNFINDTLEA 260 >gi|172059651|ref|YP_001807303.1| extracellular solute-binding protein [Burkholderia ambifaria MC40-6] gi|171992168|gb|ACB63087.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MC40-6] Length = 297 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 47/241 (19%), Positives = 94/241 (39%), Gaps = 8/241 (3%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 V+ LC + T L IK G + G + F+ + G+ +F Sbjct: 8 LMVAALCAFASGVHAQET--GTLKKIKDTGVIALGHRESSIPFSYYDQSQQVVGYSREFQ 65 Query: 65 RALSSAI---FDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 + A+ + P+ +++ +P+ ++ R +Q+ +DI +T R+ AF Sbjct: 66 MKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNTERQQQA--AFSD 123 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + G + K G+ + L G ++ AGTT+E L + + I + Sbjct: 124 TIFVIGTRLMTKKDSGVKDFADLKGKTVVTTAGTTSERLLRKMNNDKQLGMNIISAKDHG 183 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + + R A+ D + L + +P E VI+ S+ + +GD ++ + Sbjct: 184 DSFNTLESGRAVAFMMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDADFKKV 243 Query: 241 V 241 V Sbjct: 244 V 244 >gi|326793481|ref|YP_004311301.1| ABC-type transporter periplasmic subunit family 3 [Marinomonas mediterranea MMB-1] gi|326544245|gb|ADZ89465.1| ABC-type transporter, periplasmic subunit family 3 [Marinomonas mediterranea MMB-1] Length = 267 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 28/138 (20%), Positives = 61/138 (44%), Gaps = 5/138 (3%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 +L DI+ R ++ + F V + +G DVD ++ + D ++ +P+ + Sbjct: 31 VLQDIQDRKEIRIAVPQDFPPFGSVGPDLKPQGIDVDMANYIADQLDVD---LKIVPVTS 87 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 R LQ+K++D++ + RE ++ +F G ++ ++ L+G Sbjct: 88 ANRIPYLQTKKVDLVISSLGKNPEREKAIDFTTPYAPFF--LGVFGESSVDVTKMADLAG 145 Query: 146 ASICVQAGTTTELTLADY 163 ++ V G+ +L L Y Sbjct: 146 KTVGVTRGSVEDLELEKY 163 >gi|91779877|ref|YP_555085.1| basic amino acid ABC transporter periplasmic protein [Burkholderia xenovorans LB400] gi|91692537|gb|ABE35735.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia xenovorans LB400] Length = 255 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 44/174 (25%), Positives = 74/174 (42%), Gaps = 9/174 (5%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 L+ GI+ +G +KGFDVD + I ++ Q++ L ALQ++ Sbjct: 26 LRLGIDPTYPPMDSKAPDGSFKGFDVDLGNEICKRIH---ARCQWVELEFSGMIPALQAR 82 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 +ID + + T RE + L + F + S++ L+G +I VQ+GT Sbjct: 83 KIDAILSSMAITEKREQQI-LFSSKLFQFKSRLIARQGSALAGSLNALAGKAIGVQSGTQ 141 Query: 156 TE-LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD-AYTGDISALYALKLT 207 E L ++ + H + ++ EE+ A R D A G + A Y T Sbjct: 142 FEGYALKNW---APLGVHVVAYKSQEEVFADLENGRLDGALLGSVEADYGFLRT 192 >gi|213852498|ref|ZP_03382030.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 217 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 49/201 (24%), Positives = 80/201 (39%), Gaps = 30/201 (14%) Query: 47 FAEVKANGDWKGFDVDFCRAL-----SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101 F + AN GFDVD AL +S F + + +P +L+ ++ D + Sbjct: 34 FESMDANNKIVGFDVDLANALCKEIDASCTFTNQAFDSLIP--------SLKFRRFDAVM 85 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 D T RE + L P Y+D + ++ +SV QL G + VQ GTT + + Sbjct: 86 AGMDITPEREKQV-LFTTP--YYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFI- 141 Query: 162 DYFKAHNMKYHP----IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHV 215 M HP + ++ + + R DA GD + + N + P Sbjct: 142 -------MDKHPEITTVPYDSYQNAKLDLQNGRIDAVFGDTAVVTEWLKANPKLAPVGDK 194 Query: 216 ILPDIISKSPLAPAIIQGDTE 236 + + L A+ QG+TE Sbjct: 195 VTDKDYFGTGLGIAVRQGNTE 215 >gi|68160898|gb|AAY86895.1| lr1665 [Lactobacillus reuteri] Length = 283 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 34/151 (22%), Positives = 72/151 (47%), Gaps = 8/151 (5%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 I++R + G++ V + NG G+DVD RA+ K+ + P++ + Sbjct: 39 IERRKRVIVGLDDSFVPMDFRQKNGKLVGYDVDLARAVFKQY---GIKVDFQPIDWSMKE 95 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 L++ ID+L +++ + +AF + Q + KK I +++ ++G ++ Sbjct: 96 TELKNGTIDLLW--NGYSVNPSRAKKVAFSRYYLENRQILVTKKKSNIKNLNGMTGKTLG 153 Query: 150 VQAGTTTELTLADYFK--AHNMKYH-PIVFE 177 VQ G+T L + K +K+H P++++ Sbjct: 154 VQNGSTGVTVLDEKPKLLKDKIKHHTPVLYD 184 >gi|300703458|ref|YP_003745060.1| glutamate/aspartate ABC transporter periplasmic binding subunit [Ralstonia solanacearum CFBP2957] gi|299071121|emb|CBJ42433.1| glutamate/aspartate ABC transporter,periplasmic binding subunit [Ralstonia solanacearum CFBP2957] Length = 308 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 34/142 (23%), Positives = 60/142 (42%), Gaps = 14/142 (9%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK--------I 78 L IK+ G + G + F+ ++G+ G+ + +S+ I D K + Sbjct: 37 LAKIKQSGVISVGYRESSIPFSYEASSGNVTGY----SQEISNLIVDGVKKTLGLSSLQV 92 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + P+ ++ R LQ+ ID +T L R+ + AF + G ++ K GI Sbjct: 93 KLTPITSQNRIPLLQNGTIDFECGSTTNNLERQKQV--AFSNNIFIYGMLMLVKKDSGIK 150 Query: 139 SVSQLSGASICVQAGTTTELTL 160 L G ++ AGTT + L Sbjct: 151 DFPDLKGKTVVTTAGTTEDRIL 172 >gi|297156333|gb|ADI06045.1| putative soluble lytic transglycosylase [Streptomyces bingchenggensis BCW-1] Length = 274 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 60/241 (24%), Positives = 93/241 (38%), Gaps = 36/241 (14%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYL 81 ++L + +RG L+ F + GD+ G D+D R L+ + Sbjct: 39 RGTLLDRVPERGVLRVCTTGDYRPFTHLDPKTGDYAGIDIDMARDLAKS----------- 87 Query: 82 PLNAKERFLALQ-SKQIDILSRNTDWTLLREISLGLAFRPITYF------DGQGFIM--- 131 L+AK F+A +K +D L+ + +S+ LA YF DG+ ++ Sbjct: 88 -LDAKPAFVATTWAKLVDDLAAGRCDVAMGGVSVTLARARKAYFSDPYLTDGKTPVVRCE 146 Query: 132 --HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 K + + + Q G + V G T E + K + HP +EI A Sbjct: 147 DEQKYQTLEDIDQ-PGVRVIVNPGGTNEQFARAHIKRATLTVHPDNTTIFDEIIAG---- 201 Query: 190 RCDAYTGDISAL-YALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDTEWYNIV-SWTHY 246 R D D S Y K+ P + PD S S A A+ +GD E+ V W H Sbjct: 202 RADVMMTDASETRYQAKI---HPELCAVHPDKPFSFSEKAYALPRGDGEFKEYVDQWVHL 258 Query: 247 A 247 A Sbjct: 259 A 259 >gi|261368434|ref|ZP_05981317.1| amino acid ABC transporter, amino acid-binding protein [Subdoligranulum variabile DSM 15176] gi|282569525|gb|EFB75060.1| amino acid ABC transporter, amino acid-binding protein [Subdoligranulum variabile DSM 15176] Length = 286 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 25/108 (23%), Positives = 50/108 (46%), Gaps = 5/108 (4%) Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 NG++ GFD + A+ + +P +++ +N + + L +K ID + TL +I Sbjct: 81 NGEFVGFDTELATAVCEQLGVEP---EFVEINWDTKVVELDAKSIDCIWNG--MTLTDDI 135 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 + + Q +M G +S + L G ++ +AG+ E T+ Sbjct: 136 MANTSCTEAYAKNAQVVVMKTGSGYTSTADLVGKTVVAEAGSAGETTI 183 >gi|271967566|ref|YP_003341762.1| extracellular solute-binding protein [Streptosporangium roseum DSM 43021] gi|270510741|gb|ACZ89019.1| extracellular solute-binding protein [Streptosporangium roseum DSM 43021] Length = 305 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 47/183 (25%), Positives = 79/183 (43%), Gaps = 11/183 (6%) Query: 24 ASILGDIKKRGFLKCG--INTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 S + IK+RG L G ++ L+ + G+ +GFD D +AL+ I +P K++ + Sbjct: 55 GSTMEKIKQRGELIVGGSLDAPLLS-QQNPTTGEVEGFDADMGKALAKYIIGEP-KVKIV 112 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSV 140 ++ R L + +D++ + +T+ E + +AF Y G + K GI+ Sbjct: 113 NSASETREALLSNGTVDVVFQT--YTITPERAKQVAFAGPYYSSGLSLAVRKGTAGIAKP 170 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L+G ++ AG T A A K + F E A + R D Y D Sbjct: 171 EDLNGKTVI--AGANTPAIPAIKKLAPQAKI--VTFGSDPECMQALKQERGDVYVQDEML 226 Query: 201 LYA 203 L A Sbjct: 227 LVA 229 >gi|322647257|gb|EFY43756.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] Length = 193 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 42/172 (24%), Positives = 75/172 (43%), Gaps = 11/172 (6%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 SF+ + +L +K+RG L G+ F+ +G GF+VDF AL+ + K Sbjct: 27 SFA-DEGLLNKVKERGTLLVGLEGTYPPFSFQGEDGKLTGFEVDFAEALAKHL---GVKA 82 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-I 137 P +L +K+ID++ + +R+ + P T Q + +G I Sbjct: 83 SLKPTKWDGILASLDAKRIDVVINQVTISDVRKKKYDFS-TPYTVSGVQALVKKGNEGTI 141 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH---PIVFE--RVEEIDA 184 + + L G + V GT E L + + +++ + P ++ RV IDA Sbjct: 142 KTAADLQGKKVGVGLGTNYEEWLRQHVQGVDIRTYDDDPTKYQDLRVGRIDA 193 >gi|260597267|ref|YP_003209838.1| putative ABC transporter arginine-biding protein [Cronobacter turicensis z3032] gi|260216444|emb|CBA29559.1| Arginine-binding periplasmic protein 1 [Cronobacter turicensis z3032] Length = 251 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 51/203 (25%), Positives = 80/203 (39%), Gaps = 34/203 (16%) Query: 47 FAEVKANGDWKGFDVDFCRALSSAI-----FDDPSKIQYLPLNAKERFLALQSKQIDILS 101 F + A GFDVD AL I F + + +P AL+ K++D + Sbjct: 42 FESMDAGNKIVGFDVDLANALCKEIDATCTFTNQAFDSLIP--------ALKFKRVDAVM 93 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 D T R+ + L P Y+D + + SS+ QL G + VQ GTT + + Sbjct: 94 AGMDITPERQKQV-LFTTP--YYDNSALFVGLQGKNSSIEQLKGKRVGVQNGTTHQKYIT 150 Query: 162 DYFKAHNMKYHP----IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 D HP + ++ + + R DA GD + + TN P + Sbjct: 151 D--------KHPEITTVPYDSYQTARLDLQNGRIDAVFGDTAVVTEWLKTN--PKLAAVG 200 Query: 218 PDIISK----SPLAPAIIQGDTE 236 + K + L A+ QG+TE Sbjct: 201 DKVTDKDYFGTGLGIAVRQGNTE 223 >gi|253574817|ref|ZP_04852157.1| cystine ABC transporter [Paenibacillus sp. oral taxon 786 str. D14] gi|251845863|gb|EES73871.1| cystine ABC transporter [Paenibacillus sp. oral taxon 786 str. D14] Length = 296 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 42/193 (21%), Positives = 78/193 (40%), Gaps = 7/193 (3%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 +S +T + +L +IK G +K G+ + + N + GFD D + ++ + K Sbjct: 51 SSANTGSDLLNEIKTAGVIKVGLMGTYAPYNFLNENKEIDGFDADVAKEVAKRL---GVK 107 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 +++ P +LQ+ +ID + T R+ + +P + + + I Sbjct: 108 VEFAPQEFSGLIPSLQAGKIDAIISQVTITDERKQQIDFT-QPYITNEVKIIVKEDNDSI 166 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + + G +I V GT E L + + ++ V A R DA Sbjct: 167 TKLEDFKGKNIGVGLGTNDESYLRNDVLPQVGNFEIKTYDDVITSLQDLNAGRIDAT--- 223 Query: 198 ISALYALKLTNDR 210 I+ LYALK D+ Sbjct: 224 INNLYALKPIVDK 236 >gi|331656675|ref|ZP_08357637.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli TA206] gi|331054923|gb|EGI26932.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli TA206] Length = 302 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 35/155 (22%), Positives = 62/155 (40%), Gaps = 6/155 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 S L I K G + G V F+ G+ D+ A+ A+ + P +++ Sbjct: 30 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIIEAVKKKLNKPDLQVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ AF + G + K I Sbjct: 90 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQA--AFSDTIFVVGTRLLTKKGGDIKD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + L G ++ V +GTT+E+ L + M I Sbjct: 148 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRII 182 >gi|83750017|ref|ZP_00946953.1| Glutamate/aspartate-binding protein [Ralstonia solanacearum UW551] gi|207723706|ref|YP_002254104.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia solanacearum MolK2] gi|207743865|ref|YP_002260257.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia solanacearum IPO1609] gi|83723317|gb|EAP70559.1| Glutamate/aspartate-binding protein [Ralstonia solanacearum UW551] gi|206588910|emb|CAQ35872.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia solanacearum MolK2] gi|206595265|emb|CAQ62192.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia solanacearum IPO1609] Length = 308 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 34/142 (23%), Positives = 60/142 (42%), Gaps = 14/142 (9%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK--------I 78 L IK+ G + G + F+ ++G+ G+ + +S+ I D K + Sbjct: 37 LAKIKQSGVISVGYRESSIPFSYEASSGNVTGY----SQEISNLIVDGVKKTLGLSSLQV 92 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + P+ ++ R LQ+ ID +T L R+ + AF + G ++ K GI Sbjct: 93 KLTPITSQNRIPLLQNGTIDFECGSTTNNLERQKQV--AFSNNIFIYGMLMLVKKDSGIK 150 Query: 139 SVSQLSGASICVQAGTTTELTL 160 L G ++ AGTT + L Sbjct: 151 DFPDLKGKTVVTTAGTTEDRIL 172 >gi|328958164|ref|YP_004375550.1| high affinity arginine ABC transporter [Carnobacterium sp. 17-4] gi|328674488|gb|AEB30534.1| high affinity arginine ABC transporter [Carnobacterium sp. 17-4] Length = 473 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 49/182 (26%), Positives = 77/182 (42%), Gaps = 19/182 (10%) Query: 38 CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97 G + F +G++KG DVD A++ D + PL AL+S QI Sbjct: 29 IGTDVTFAPFEYKDVDGEYKGIDVDLLDAIAK---DQGFNYELRPLGFSAALQALESNQI 85 Query: 98 DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG---ISSVSQLSGASICVQAGT 154 D + T R+ S + P YF+ G +M + I+S L G ++ V+ GT Sbjct: 86 DGMIAGMSITPERQESFDFS-DP--YFE-SGVVMAVSESNDEITSYEDLEGKTVAVKVGT 141 Query: 155 T----TELTLADY-FKAHNMKYHPIVFERV--EEIDAAYRAHRCDAYTGDISALYALKLT 207 T E ++ F+ + + ++E V DAA+ + AY I + LKLT Sbjct: 142 TGAAFAESIQDEFGFELNTFEDSANMYEDVLTGNSDAAFEDYPVMAYA--IQSGLGLKLT 199 Query: 208 ND 209 D Sbjct: 200 MD 201 >gi|167589680|ref|ZP_02382068.1| glutamine ABC transporter periplasmic protein [Burkholderia ubonensis Bu] Length = 250 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 45/166 (27%), Positives = 64/166 (38%), Gaps = 17/166 (10%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 L G +T + F E K + GFD+D ++ D K P++ ALQ++ Sbjct: 28 LVVGTDTSFMPF-EFKQGDKYVGFDLDLWAEIAK---DQGWKYTIQPMDFAGLIPALQTQ 83 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDG-QGFIMHKKKGISSVSQLSGASICVQAGT 154 ID+ T+ E + F Y G + I S+ L+G I + GT Sbjct: 84 NIDVALSGM--TIKEERKKAIDFSAPYYDSGLAAMVQTGNTTIKSIDDLNGKVIAAKTGT 141 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAY---RAHRCDAYTGD 197 T D+ KAH P + ID AY A R DA D Sbjct: 142 AT----IDWIKAH---LKPKEIRQFPNIDQAYLALEAGRVDAAMHD 180 >gi|227544221|ref|ZP_03974270.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri CF48-3A] gi|227185792|gb|EEI65863.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri CF48-3A] Length = 256 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 34/151 (22%), Positives = 72/151 (47%), Gaps = 8/151 (5%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 I++R + G++ V + NG G+DVD RA+ K+ + P++ + Sbjct: 45 IERRKRVIVGLDDSFVPMDFRQKNGKLVGYDVDLARAVFKQY---GIKVDFQPIDWSMKE 101 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 L++ ID+L +++ + +AF + Q + KK I +++ ++G ++ Sbjct: 102 TELKNGTIDLLW--NGYSVNPSRAKKVAFSRYYLENRQILVTKKKSNIKNLNGMTGKTLG 159 Query: 150 VQAGTTTELTLADYFK--AHNMKYH-PIVFE 177 VQ G+T L + K +K+H P++++ Sbjct: 160 VQNGSTGVTVLDEKPKLLKDKIKHHTPVLYD 190 >gi|291613922|ref|YP_003524079.1| diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) [Sideroxydans lithotrophicus ES-1] gi|291584034|gb|ADE11692.1| diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) [Sideroxydans lithotrophicus ES-1] Length = 1149 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 46/172 (26%), Positives = 71/172 (41%), Gaps = 19/172 (11%) Query: 34 GFLKCGINTGL----VGFAE------VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 GFL NT VG E ANG G VD L++ ++ ++ Y+P Sbjct: 14 GFLSLAGNTCATEVRVGLYENEPKIFTDANGAPSGILVDL---LNTVAAEEKWQLSYVPC 70 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSVS 141 +E L++ ID++ + ++ R + P Y Q ++ +KG ISSV Sbjct: 71 TWEECLKELEAGSIDLMP-DVAFSPERALHFDFHTTPALYSWSQ---IYSRKGVDISSVL 126 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 L G I + AG E + F N+K I VE+ R+ + DA Sbjct: 127 DLKGKRIALLAGGIQESAITAMFSGFNIKVQLIRTRSVEDAFRLTRSGQADA 178 >gi|212716942|ref|ZP_03325070.1| hypothetical protein BIFCAT_01886 [Bifidobacterium catenulatum DSM 16992] gi|212660227|gb|EEB20802.1| hypothetical protein BIFCAT_01886 [Bifidobacterium catenulatum DSM 16992] Length = 279 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 34/159 (21%), Positives = 67/159 (42%), Gaps = 9/159 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 ++ C F S G G ++ GI G K +G + GFDVD + Sbjct: 15 IATFCACACVFA-----VSACGADDADGKIRVGIKFDQPGLG-FKKSGTYVGFDVDVAKY 68 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 ++ + +I + +K+R LQ+ +D + +++ E ++F + G Sbjct: 69 IAKKLGYSEDQIVWKEAPSKQREAMLQNGDVDFIVAT--YSITDERKKVVSFAGPYFVAG 126 Query: 127 QGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYF 164 Q ++ K + I L+G +C G+T+ +T+ + F Sbjct: 127 QDLLVRKDETSIKGPEDLNGKRLCSVTGSTSAVTVKEKF 165 >gi|15614024|ref|NP_242327.1| ABC transporter (substrate-binding protein) [Bacillus halodurans C-125] gi|10174078|dbj|BAB05180.1| ABC transporter (substrate-binding protein) [Bacillus halodurans C-125] Length = 276 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 14/145 (9%) Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G+ GFDVD ++S + + KIQ + N ALQ+ ++D T R+ Sbjct: 71 TGEIVGFDVDIAEYITSELGYE-LKIQDMDFNG--IIPALQAGRVDFALSGMTPTEERKK 127 Query: 113 SLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTE---LTLADYFKAHN 168 S+ + Y+D Q ++ K++ G+SSV L+G ++ VQ + E + L + Sbjct: 128 SVDFSD---VYYDAQNLVVFKEEDGLSSVEDLAGKTVGVQLASIQEEAAVELQEELDGLT 184 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDA 193 ++ V E V+E+ A R DA Sbjct: 185 IETRNRVPELVQEL----LAGRVDA 205 >gi|329938381|ref|ZP_08287806.1| putative ABC transporter substrate-binding protein [Streptomyces griseoaurantiacus M045] gi|329302354|gb|EGG46245.1| putative ABC transporter substrate-binding protein [Streptomyces griseoaurantiacus M045] Length = 316 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 44/141 (31%), Positives = 65/141 (46%), Gaps = 17/141 (12%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWK---GFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 ++K G LK G G A NG K G D+D A++ + ++Q + + Sbjct: 66 VRKAGTLKVGSAIGAPPGAYYP-NGPDKAPAGQDIDLADAVAKVLG---VRLQRQDASFE 121 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD-GQGFIMHK-----KKGISSV 140 AL S + D + N T R ++ +TY D GQGF + K KK ++ + Sbjct: 122 TILPALGSGKYDFGTGNFGVTTARLKTIDF----VTYIDDGQGFAVKKGSTTLKKKVTDL 177 Query: 141 SQLSGASICVQAGTTTELTLA 161 +QL G +I AGTT E TLA Sbjct: 178 TQLCGLTIGTGAGTTFETTLA 198 >gi|290963272|ref|YP_003494454.1| amino acid ABC transporter substrate-binding protein [Streptomyces scabiei 87.22] gi|260652798|emb|CBG75931.1| putative amino acid ABC transporter solute-binding protein [Streptomyces scabiei 87.22] Length = 274 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 45/187 (24%), Positives = 77/187 (41%), Gaps = 9/187 (4%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 +S T +S+L D KR L G+ G G + GFD+D ++ + D Sbjct: 24 SSDDTGSSVL-DAAKRDKLVIGVKADQPGLGLRTPEGTFTGFDIDVATYVAKELGVDKKD 82 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKG 136 I + + R LQ Q+D++ R+ ++F GQ ++ K K Sbjct: 83 ITFKEAVSANREAFLQQGQVDMVVATYSINDARKEK--VSFAGPYLVAGQDLLVRKDNKD 140 Query: 137 ISSVSQLSGASICVQAGTTT-ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I+ L+G +C AG+T+ +L Y + ++ V+ + + + DA T Sbjct: 141 ITGPESLNGKKLCSVAGSTSAQLIKEKYAEDAQLQEERTYSACVDRV----LSGQLDAVT 196 Query: 196 GDISALY 202 D S LY Sbjct: 197 TDNSILY 203 >gi|153011067|ref|YP_001372281.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC 49188] gi|151562955|gb|ABS16452.1| extracellular solute-binding protein family 3 [Ochrobactrum anthropi ATCC 49188] Length = 266 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 34/132 (25%), Positives = 57/132 (43%), Gaps = 5/132 (3%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 DIK G +K G+ F + + + G+D D + L+ + D Q +P+ R Sbjct: 32 DIKSAGKIKIGMLVDFPPFGIMNTSNEPDGYDADVAKLLAKELGVD---AQIVPVTGPNR 88 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 LQS Q+D+L + T R S+ + +P G K ++ +LSG SI Sbjct: 89 IPYLQSGQVDVLVASLGITEERAKSVDFS-QPYAGI-SIGVFGPKDTVVTKPEELSGKSI 146 Query: 149 CVQAGTTTELTL 160 V +T + + Sbjct: 147 GVARASTQDTAV 158 >gi|308068845|ref|YP_003870450.1| Probable amino-acid ABC transporter extracellular binding protein ytmK precursor [Paenibacillus polymyxa E681] gi|305858124|gb|ADM69912.1| Probable amino-acid ABC transporter extracellular binding protein ytmK precursor [Paenibacillus polymyxa E681] Length = 283 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 31/141 (21%), Positives = 56/141 (39%), Gaps = 7/141 (4%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS-KIQYLPLNAK 86 GD+KK + G T + NG+ GFDV+ + L + P + ++ ++ Sbjct: 34 GDVKK---IIVGTGTQFKNVCFIDENGNLTGFDVELIKELDKRL---PQYEFEFKTMDFG 87 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 L+L + +ID++S + RE P + F + + I S+ L G Sbjct: 88 NLLLSLDAGKIDLVSHQMEKNPEREAKYLFNKNPYSIFLNRVAVAKDNNTIHSIDDLKGK 147 Query: 147 SICVQAGTTTELTLADYFKAH 167 + + L +Y K H Sbjct: 148 KVLTSPTSNAAYVLKEYNKTH 168 >gi|312958494|ref|ZP_07773014.1| amino acid ABC transporter [Pseudomonas fluorescens WH6] gi|311287037|gb|EFQ65598.1| amino acid ABC transporter [Pseudomonas fluorescens WH6] Length = 265 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 50/218 (22%), Positives = 89/218 (40%), Gaps = 14/218 (6%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 D KRG LK G++ + F GD GF+VD +A++ ++ K++ + Sbjct: 28 DAVKRGTLKVGMDPTYMPFEMTDKRGDIIGFEVDILKAMAKSM---GVKLELVSTGYDGI 84 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGA 146 A + + D++ + TL +E +L L F GQ ++ K + I S L+ Sbjct: 85 IPAFLTGKFDMIG--SGMTLTQERNLRLNFSEPFIVVGQTLLIRKELEGTIKSYKDLNDE 142 Query: 147 S--ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 + + GTT E+ KYH E+ +D Y + + Sbjct: 143 KYRLTSKLGTTGEMVAKKLI--AKAKYHGYDNEQEGVLDVVNGKADAFVYDAPYNVVAEK 200 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 K+ N + V L + + PLA + +GD + N ++ Sbjct: 201 KVGNGK---LVFLDEPFTFEPLAFGLKKGDYDSINFIN 235 >gi|291557062|emb|CBL34179.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [Eubacterium siraeum V10Sc8a] Length = 294 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 51/216 (23%), Positives = 91/216 (42%), Gaps = 16/216 (7%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L +IK G + G+ + F V NG+++G+D+ F L D +I Y+ A Sbjct: 47 LDEIKASGKINIGVFSDKNPFGYVDENGEYQGYDIYFANRLGK---DLGVEINYVSTEAA 103 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD-GQGFIMHKKKGISSVSQLSG 145 R L++ ++DI+ N +T+ E + + F + Y + G + I+S+ Sbjct: 104 NRVEYLETGKVDIILAN--FTVTEERAEKVDF-ALPYMNVALGVVSPDSNVITSLDNWKA 160 Query: 146 AS-ICVQAGTTTELTLA-DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 + V +GTT EL L +Y KY + +A A+ D + + A Sbjct: 161 EDRMIVISGTTAELYLTKNYPDIKLQKYDSYATAK-----SAIENGNGVAWANDNTEVIA 215 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 N V + + S+ +APA+ +G+ N Sbjct: 216 FAKQN--KGYTVGIDSLGSQDTIAPAVTKGNETLLN 249 >gi|227824559|ref|ZP_03989391.1| ABC polar amino acid transporter [Acidaminococcus sp. D21] gi|226905058|gb|EEH90976.1| ABC polar amino acid transporter [Acidaminococcus sp. D21] Length = 274 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 37/150 (24%), Positives = 67/150 (44%), Gaps = 7/150 (4%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRA 66 ++L ++ T F+ K+ L+ G F + K + D+ GFD+D RA Sbjct: 23 TVLVGMLAALTMFAAGCGGKDAAKESKVLRAGTEPTFAPFEFQEKDSKDFTGFDMDLIRA 82 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 + + D +I+ + +A A+ S ID+++ + ++ E + F Y G Sbjct: 83 IGKQMGRD-VEIKNMGFDA--LIPAINSGNIDVVA--SGMSITEERKKAVTFSDPYYTSG 137 Query: 127 QGFIM-HKKKGISSVSQLSGASICVQAGTT 155 I+ + + I S+ L G +I VQ GTT Sbjct: 138 LAIIVRNDENNIKSLKDLEGKTISVQIGTT 167 >gi|92112667|ref|YP_572595.1| extracellular solute-binding protein [Chromohalobacter salexigens DSM 3043] gi|91795757|gb|ABE57896.1| amino acid ABC transporter substrate-binding protein, PAAT family [Chromohalobacter salexigens DSM 3043] Length = 261 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 40/155 (25%), Positives = 67/155 (43%), Gaps = 7/155 (4%) Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F A+G W GF+V+ +A+ + + + + P F AL S +ID++ + Sbjct: 43 FTYKDADGSWTGFEVELGQAICAQM---DAACEITPTGWSGIFPALNSGKIDMIMNSLSI 99 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T R+ +AF YF ++ K + L G + VQ G+TT T A A Sbjct: 100 TEKRKRV--IAFSDPYYFTPSAYVTAKANDMQIPEDLDGKILGVQ-GSTTNATFARRSLA 156 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 + V+++ E+ + A R DA D A+ Sbjct: 157 -DTGVELKVYDQQEQANRDLLAGRVDAILADEIAM 190 >gi|330971468|gb|EGH71534.1| extracellular solute-binding protein family 3 [Pseudomonas syringae pv. aceris str. M302273PT] Length = 282 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 52/213 (24%), Positives = 92/213 (43%), Gaps = 25/213 (11%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCR 65 ++++ L + + + S + + + L+ G+ +G V + + + G+W+GF DF R Sbjct: 16 IALMSLGPFYSQAQAAPESSMARVDRTKLLRVGVASGSVPYYKKNFSTGEWEGFGPDFAR 75 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 L+ D KI+++ L LQS +ID++ T T RE +G + FD Sbjct: 76 DLAK---DLGVKIEFVETTWGNSVLDLQSNKIDVMFALTP-TPAREKMIGFS---APLFD 128 Query: 126 GQGFIMHKKKGISSVS--QLSG--ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 ++M K G S Q + A I V G++ D F K F R+E Sbjct: 129 NT-YVMLCKSGYPDKSWEQFNSPEAKITVDLGSSM-----DNF--ATAKLPNASFSRLES 180 Query: 182 IDAA---YRAHRCDAYTGDISALYALKLTNDRP 211 + A+ +A R D ++ L A+ + P Sbjct: 181 VMASTMLLQAGRADCQV--LTVLLAMPIVQKMP 211 >gi|159794821|pdb|2IA4|A Chain A, Crystal Structure Of Novel Amino Acid Binding Protein From Shigella Flexneri Length = 279 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 6/141 (4%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 S L I K G + G V F+ G+ D+ A+ A+ + P +++ Sbjct: 5 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 64 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ AF + G + K I Sbjct: 65 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQA--AFSDTIFVVGTRLLTKKGGDIKD 122 Query: 140 VSQLSGASICVQAGTTTELTL 160 + L G ++ V +GTT+E+ L Sbjct: 123 FADLKGKAVVVTSGTTSEVLL 143 >gi|146282694|ref|YP_001172847.1| cystine transporter subunit [Pseudomonas stutzeri A1501] gi|145570899|gb|ABP80005.1| cystine ABC transporter, periplasmic cystine binding protein [Pseudomonas stutzeri A1501] Length = 264 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 5/85 (5%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 F +F+ A +L +IK G L+ G+ F +G+ GF+VDF AL+ + Sbjct: 23 FMPAFA--ADLLDEIKSNGTLEVGLEGTYPPFNYQDESGELTGFEVDFANALAEEL---G 77 Query: 76 SKIQYLPLNAKERFLALQSKQIDIL 100 K ++ P AL+SK++D++ Sbjct: 78 VKAEFQPTKWDGILAALESKRLDVV 102 >gi|257093422|ref|YP_003167063.1| family 3 extracellular solute-binding protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045946|gb|ACV35134.1| extracellular solute-binding protein family 3 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 301 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 53/125 (42%), Gaps = 2/125 (1%) Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 I+ +P+ ++ R +Q+ +D+ +T T R+ + +F + G + GI Sbjct: 87 IKLMPVTSENRITLVQNGSVDLECGSTTNTTERQKQV--SFSNSIFVVGTRMLTRSNSGI 144 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 L+G ++ AGTT+E L + +NMK I + E R A+ D Sbjct: 145 KDFPDLAGKTVVTTAGTTSERLLRKMNEDNNMKVKIISAKDHGESFLTLETGRATAFVMD 204 Query: 198 ISALY 202 LY Sbjct: 205 EVLLY 209 >gi|209543097|ref|YP_002275326.1| family 3 extracellular solute-binding protein [Gluconacetobacter diazotrophicus PAl 5] gi|209530774|gb|ACI50711.1| extracellular solute-binding protein family 3 [Gluconacetobacter diazotrophicus PAl 5] Length = 281 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 4/92 (4%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 +L L+ L A L DI+ G L G+N L A + +GFDVD AL+ Sbjct: 24 VLSLLPLCIGQ-GAQARALADIRASGHLNIGVNPALPPLAAYDSRNVIEGFDVDVGTALA 82 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 + + P + +P+++ R L + ++D++ Sbjct: 83 ARLGVSP---RLVPVSSSGRIPYLMAGKVDVV 111 >gi|325524104|gb|EGD02268.1| extracellular solute-binding protein [Burkholderia sp. TJI49] Length = 298 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 44/198 (22%), Positives = 76/198 (38%), Gaps = 14/198 (7%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD-------PS-KI 78 L IK G + GI V F+ D + ++ + R +++ I + P + Sbjct: 29 LKKIKDTGVVSLGIRESSVPFSY----SDNQQKNIGYSRDIAARIIEQLKTELNLPGLAV 84 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + +P+ ++ R LQ+ ID +T TL R+ AF + G F K G+ Sbjct: 85 KEIPITSQNRIPLLQNGTIDFECGSTTNTLERQKQA--AFSNSIFLYGIRFSTRKDSGVK 142 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + L+G ++ AGT+ E L + M I + E R A+ D Sbjct: 143 DFADLAGKTVATTAGTSDERLLRKLNEEKGMNMTIISAKDHAEAFMNVTTGRAVAFVMDE 202 Query: 199 SALYALKLTNDRPSEHVI 216 LY + P + + Sbjct: 203 PLLYGEIAKDRNPGAYTV 220 >gi|318604771|emb|CBY26269.1| glutamate Aspartate periplasmic binding protein precursor GltI [Yersinia enterocolitica subsp. palearctica Y11] Length = 304 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 49/249 (19%), Positives = 98/249 (39%), Gaps = 9/249 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQYLP 82 L IK G + G V F+ G+ D+ + AI + P +++ +P Sbjct: 35 LKKIKDNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNLIVDAIKKKLNAPDLQVKLIP 94 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R LQ+ D +T L R+ AF + G + K + + Sbjct: 95 ITSQNRIPLLQNGTFDFECGSTTNNLERQQQA--AFSNTIFVVGTRLLTKKGSEVKDFKE 152 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+G + V +GTT+E+ L + M I + + + R A+ D + L Sbjct: 153 LAGKPVVVTSGTTSEVLLNKLNEKDKMNMRIISAKDHGDSFRTLESGRAVAFMMDDALLA 212 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 + +P + I+ S+ + + D + ++ T + TA+ G+ +K+ + Sbjct: 213 GERAKAKKPDQWDIVGTPQSQEAYGCMLRKDDPAFKTLLDET---IATAQTSGVAEKSFD 269 Query: 263 QVSKDTTNP 271 + K+ P Sbjct: 270 RWFKNPIPP 278 >gi|296127372|ref|YP_003634624.1| extracellular solute-binding protein family 3 [Brachyspira murdochii DSM 12563] gi|296019188|gb|ADG72425.1| extracellular solute-binding protein family 3 [Brachyspira murdochii DSM 12563] Length = 286 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 47/203 (23%), Positives = 92/203 (45%), Gaps = 31/203 (15%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L ++ G L G++ V NG+ GFD+D R ++ + +++ P++ Sbjct: 49 LSRVQNAGKLVLGLDDTFAPMGFVGDNGEIVGFDIDLAREVAKRM---GVQLETKPIDWG 105 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM--HKKKGISSVSQLS 144 L + +ID+L + + R++ + + +P Y + I+ + + I+S+ L+ Sbjct: 106 SSTSILTNGEIDVLWNGLNISDERKLYMNFS-KP--YLNNMLIIVKNNDDESINSIDDLA 162 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G + VQ G E + HPIV +++E+ Y G+I AL L Sbjct: 163 GKIVGVQYGGNYE----------QISNHPIV-SQIKEL---------RQYNGNIDALADL 202 Query: 205 KLTNDRPSEHVILPDIISKSPLA 227 + NDR + VI+ D+ ++ +A Sbjct: 203 Q--NDRLN-AVIIDDVFAQYYIA 222 >gi|295394798|ref|ZP_06805013.1| glutamate ABC superfamily ATP binding cassette transporter, binding protein [Brevibacterium mcbrellneri ATCC 49030] gi|294972394|gb|EFG48254.1| glutamate ABC superfamily ATP binding cassette transporter, binding protein [Brevibacterium mcbrellneri ATCC 49030] Length = 295 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 28/136 (20%), Positives = 59/136 (43%), Gaps = 3/136 (2%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDW-KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 K G +K G+ G + A D +GFD++ + +S+++ +I+++ + R Sbjct: 57 KDAGKIKVGVKYDQPGLGNISAGADKPEGFDIEIAKMVSASLGFKADEIEFVETVSANRE 116 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 LQ +D++ +T+ + + F Y GQ ++ I L+G +C Sbjct: 117 PFLQQGNVDMIVAT--YTINDKRKEVVDFAGPYYVAGQDLLVKADSDIDGPDSLAGKKVC 174 Query: 150 VQAGTTTELTLADYFK 165 G+T + + +K Sbjct: 175 SVDGSTPAQNIQEKYK 190 >gi|159794822|pdb|2IA4|B Chain B, Crystal Structure Of Novel Amino Acid Binding Protein From Shigella Flexneri Length = 280 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 6/141 (4%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 S L I K G + G V F+ G+ D+ A+ A+ + P +++ Sbjct: 6 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 65 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ AF + G + K I Sbjct: 66 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQA--AFSDTIFVVGTRLLTKKGGDIKD 123 Query: 140 VSQLSGASICVQAGTTTELTL 160 + L G ++ V +GTT+E+ L Sbjct: 124 FADLKGKAVVVTSGTTSEVLL 144 >gi|292669467|ref|ZP_06602893.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Selenomonas noxia ATCC 43541] gi|292648920|gb|EFF66892.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Selenomonas noxia ATCC 43541] Length = 257 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 30/103 (29%), Positives = 53/103 (51%), Gaps = 6/103 (5%) Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 D++GFD+D RA++ + + ++IQ + + ALQ+K ID++ + T+ E Sbjct: 56 DYQGFDMDLIRAIAKEMGSE-AEIQNIGFDG--LIPALQAKNIDVII--SGMTINDERKE 110 Query: 115 GLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTT 156 + F Y G ++ ++ I S S L G + VQ GTT+ Sbjct: 111 RVNFSDPYYQSGLTMVVRSDEENIKSFSDLKGHKVAVQIGTTS 153 >gi|261406923|ref|YP_003243164.1| family 3 extracellular solute-binding protein [Paenibacillus sp. Y412MC10] gi|261283386|gb|ACX65357.1| extracellular solute-binding protein family 3 [Paenibacillus sp. Y412MC10] Length = 278 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 41/176 (23%), Positives = 70/176 (39%), Gaps = 11/176 (6%) Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 + NG GFDV+ R + + + ++Q + L+L++K+ID ++ + Sbjct: 59 IDENGKLTGFDVELVREIDQRLPEYEFELQTQEFS--NLLLSLETKKIDFVAHQMEKNPE 116 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 R P Y+ + + + I S++ L G + A + L +Y K +N Sbjct: 117 RTEKYLFNKEPYAYWRNKIIVAKENDSIQSLNDLKGKKVLTGATSAAAQILENYNKDNNN 176 Query: 170 KYHPIVFERVEEIDAAYR--AHRCDAYTGD------ISALYALKLTNDRPSEHVIL 217 + IV++ D + R DA G I LK T D SE IL Sbjct: 177 AIN-IVYQNGAANDTVSQITTGRVDATVGADFTLPLIDPQGKLKTTGDHLSEADIL 231 >gi|182418197|ref|ZP_02949497.1| amino acid ABC transporter, amino acid-binding protein [Clostridium butyricum 5521] gi|237666247|ref|ZP_04526234.1| extracellular solute-binding protein, family 3 [Clostridium butyricum E4 str. BoNT E BL5262] gi|182378015|gb|EDT75555.1| amino acid ABC transporter, amino acid-binding protein [Clostridium butyricum 5521] gi|237658337|gb|EEP55890.1| extracellular solute-binding protein, family 3 [Clostridium butyricum E4 str. BoNT E BL5262] Length = 272 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 40/158 (25%), Positives = 66/158 (41%), Gaps = 10/158 (6%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGF---AEVKANGDWKGFDVDFCRALSSAIFDD 74 +S N + L IK+ G L G + + A V + KGFD+D +A++ + Sbjct: 27 SSGDENKTALDKIKESGKLVVGTSADYPPYEFHATVDGKDEIKGFDIDIAQAVADDL--- 83 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-- 132 K++ ++ +ALQ ++D++ T E F I Y FI+ Sbjct: 84 GVKLEIKDMDFDGLLVALQGDKVDMVFAG--MTPTEERKQNADFSDIYYTATHRFILRSG 141 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 ++ + S L I VQ G+ E D F A N+K Sbjct: 142 EEGSVKSFDDLKDKKIGVQKGSIQEGIAKDNFDAANIK 179 >gi|17546980|ref|NP_520382.1| putative amino-acid-binding periplasmic (PBP) ABC transporter protein [Ralstonia solanacearum GMI1000] gi|17429281|emb|CAD15968.1| putative amino-acid-binding periplasmic (pbp) abc transporter protein [Ralstonia solanacearum GMI1000] Length = 308 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 34/142 (23%), Positives = 60/142 (42%), Gaps = 14/142 (9%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK--------I 78 L IK+ G + G + F+ ++G+ G+ + +S+ I D K + Sbjct: 37 LAKIKQSGVISVGYRESSIPFSYEASSGNITGY----SQEISNLIVDGVKKKLGLSGLQV 92 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + P+ ++ R LQ+ ID +T L R+ + AF + G ++ K GI Sbjct: 93 KLTPITSQNRIPLLQNGTIDFECGSTTNNLERQKQV--AFSNNIFIYGMLMLVKKDAGIK 150 Query: 139 SVSQLSGASICVQAGTTTELTL 160 L G ++ AGTT + L Sbjct: 151 DFPDLKGKTVVTTAGTTEDRIL 172 >gi|311064464|ref|YP_003971189.1| solute-binding protein of ABC transporter system [Bifidobacterium bifidum PRL2010] gi|310866783|gb|ADP36152.1| Predicted solute binding protein of ABC transporter system [Bifidobacterium bifidum PRL2010] Length = 309 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 2/103 (1%) Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 NG + GFDVD R ++ A+ +I + P+ + R L+S Q+D++ + T E Sbjct: 73 NGGYSGFDVDVARYVAKALGYADKQIVFKPVTPRSRVSMLESAQVDMVVSSFGITERHES 132 Query: 113 SLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGT 154 ++ + P + G I+ + ++G CV AG+ Sbjct: 133 AVTMTG-PYLIVRQDLLVRAADAGDITGIKDMNGRKACVVAGS 174 >gi|310287551|ref|YP_003938809.1| solute binding protein of ABC transporter system [Bifidobacterium bifidum S17] gi|309251487|gb|ADO53235.1| solute binding protein of ABC transporter system [Bifidobacterium bifidum S17] Length = 304 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 2/103 (1%) Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 NG + GFDVD R ++ A+ +I + P+ + R L+S Q+D++ + T E Sbjct: 73 NGGYSGFDVDVARYVAKALGYADKQIVFKPVTPRSRVSMLESAQVDMVVSSFGITERHES 132 Query: 113 SLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGT 154 ++ + P + G I+ + ++G CV AG+ Sbjct: 133 AVTMTG-PYLIVRQDLLVRAADAGDITGIKDMNGRKACVVAGS 174 >gi|256832193|ref|YP_003160920.1| extracellular solute-binding protein family 3 [Jonesia denitrificans DSM 20603] gi|256685724|gb|ACV08617.1| extracellular solute-binding protein family 3 [Jonesia denitrificans DSM 20603] Length = 258 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 37/148 (25%), Positives = 62/148 (41%), Gaps = 9/148 (6%) Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ G D+D +++ + D I +A E +L+S Q DI++ T T+ E Sbjct: 58 GEIVGIDMDIMAEVATDL-DLELSIVEAAFDAMESGASLESNQCDIIA--TGMTITEERE 114 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 +F Y QG ++ ++S+ L+G S+ VQ TT A + Sbjct: 115 ERFSFSNPYYDANQGVLVTAGTTVASLEDLNGQSVAVQIETT------GASLAEEQGLNA 168 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISAL 201 VFE + + A + DA D+ L Sbjct: 169 TVFEDLGLVVQAVATGQTDAAIADVGTL 196 >gi|251794795|ref|YP_003009526.1| aliphatic sulfonates family ABC transporter periplsmic ligand-binding protein [Paenibacillus sp. JDR-2] gi|247542421|gb|ACS99439.1| aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein [Paenibacillus sp. JDR-2] Length = 343 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 34/110 (30%), Positives = 50/110 (45%), Gaps = 7/110 (6%) Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYF-DGQ---GFIMHKKKGISSVSQLSGA 146 +L SK++D LS D + +S L F I DG+ I K KGIS V L G Sbjct: 98 SLASKRVD-LSFLGDGATISGLSANLPFEVIALLSDGKLSNSIITPKDKGISKVEDLKGK 156 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA--AYRAHRCDAY 194 SI V GTT + L + + + + ++ DA A+ + DA+ Sbjct: 157 SIAVAKGTTAHVFLLKVLEKYGLSDKDVNLIALQPEDALPAFETSKVDAW 206 >gi|330838427|ref|YP_004413007.1| ABC-type transporter, periplasmic subunit family 3 [Selenomonas sputigena ATCC 35185] gi|329746191|gb|AEB99547.1| ABC-type transporter, periplasmic subunit family 3 [Selenomonas sputigena ATCC 35185] Length = 259 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 47/180 (26%), Positives = 79/180 (43%), Gaps = 28/180 (15%) Query: 36 LKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSS--AIFDDPSKIQYLPLNAKERFLAL 92 L+ G N F NG +++GFD+D RA++ + D I + L AL Sbjct: 37 LRVGTNADFAPFEFQGENGKEYEGFDMDLARAVAEEMGMTADIQNINFDGL-----IPAL 91 Query: 93 QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQ 151 SK IDI + T+ E + F Y G ++ K I+ L+G ++ VQ Sbjct: 92 VSKNIDIAI--SGMTINDERKKNVLFSEPYYQSGLTIVVKKDNTDINGFKDLAGKTVAVQ 149 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 GTT+ A +K +P + +V+E++++ D + ++ A + NDRP Sbjct: 150 IGTTS---------AKEVKKNPDI--QVKELNSS-----ADTFL-ELKAGGVQAVVNDRP 192 >gi|162148490|ref|YP_001602951.1| putative arginine-binding periplasmic protein 2 [Gluconacetobacter diazotrophicus PAl 5] gi|161787067|emb|CAP56654.1| putative arginine-binding periplasmic protein 2 precursor [Gluconacetobacter diazotrophicus PAl 5] Length = 305 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 4/92 (4%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 +L L+ L A L DI+ G L G+N L A + +GFDVD AL+ Sbjct: 48 VLSLLPLCIGQ-GAQARALADIRASGHLNIGVNPALPPLAAYDSRNVIEGFDVDVGTALA 106 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 + + P + +P+++ R L + ++D++ Sbjct: 107 ARLGVSP---RLVPVSSSGRIPYLMAGKVDVV 135 >gi|317133176|ref|YP_004092490.1| extracellular solute-binding protein family 3 [Ethanoligenens harbinense YUAN-3] gi|315471155|gb|ADU27759.1| extracellular solute-binding protein family 3 [Ethanoligenens harbinense YUAN-3] Length = 270 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 59/215 (27%), Positives = 87/215 (40%), Gaps = 28/215 (13%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFA-EVKANGDWK--GFDVD 62 S LC+ + S S++ L IKK G L G + F + NG K G DV+ Sbjct: 13 LASALCVTMASCKSSSSSTDKLDAIKKAGVLVVGTSADYPPFEFHKQQNGQDKIMGADVE 72 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 ++ I KIQ+ ++ ALQS +ID++ T RE ++ + + Sbjct: 73 IAEQIAKKI---GVKIQWQDMDFDGLLPALQSGKIDMIIAGMIDTPEREKAVDFSHK--Y 127 Query: 123 YFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTE------LTLADY----------F 164 Y I+ K S +S LSG I VQ GTT + L DY Sbjct: 128 YLSTDQAIIRKDDLSKYSKLSDLSGKHIGVQLGTTQQDDMKKWLPSGDYVALGKDTDLIL 187 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + + K ++ E E I AY + D T +IS Sbjct: 188 ELKSKKVDAVILE--EPIVKAYVSQNSDLVTANIS 220 >gi|187929867|ref|YP_001900354.1| family 3 extracellular solute-binding protein [Ralstonia pickettii 12J] gi|187726757|gb|ACD27922.1| extracellular solute-binding protein family 3 [Ralstonia pickettii 12J] Length = 254 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 43/180 (23%), Positives = 77/180 (42%), Gaps = 18/180 (10%) Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 E NG GFDVD AL+ + +++ ++ K L S++ D+ T Sbjct: 47 EFVENGKRTGFDVDLIDALARTL---GRPVEWTDIDFKGLVPGLISRRFDVAISGIYITE 103 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKG---ISSVSQLSGASICVQAGTTTELTLADYFK 165 R+ + + Y+ G G + K+G I + + L+G + VQ GT + +Y + Sbjct: 104 ERKKVVDFT---VPYYHG-GLVALVKQGNTAIKTPADLNGKKVSVQVGTKS----VNYLR 155 Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCD-AYTGDISALYALKLTNDRPSEHVILPDIISKS 224 + K + E+ E+ R D A TG +A Y +K RP ++ P + ++ Sbjct: 156 ENYPKVERVEVEKNNEMFNLVEIGRADAAVTGRPAAAYYVKA---RPGLRLVEPALTTEE 212 >gi|327480951|gb|AEA84261.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166] Length = 161 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 5/85 (5%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 F +F+ A +L +IK G L+ G+ F +G+ GF+VDF AL+ + Sbjct: 23 FMPAFA--ADLLDEIKSNGTLEVGLEGTYPPFNYQDESGELTGFEVDFANALTEELG--- 77 Query: 76 SKIQYLPLNAKERFLALQSKQIDIL 100 + ++ P AL+SK++D++ Sbjct: 78 VRAEFQPTKWDGILAALESKRLDVV 102 >gi|317491137|ref|ZP_07949573.1| extracellular solute-binding protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920684|gb|EFV42007.1| extracellular solute-binding protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 304 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 36/155 (23%), Positives = 63/155 (40%), Gaps = 6/155 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 + L IK G + G V F+ G+ D+ + A+ + P+ +++ Sbjct: 32 SDTLQKIKNNGVIVVGHRESSVPFSYYDNAQKVVGYSQDYSNQIVDAVKKQLNMPNLQVK 91 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 LP+ ++ R LQ+ D +T R+ AF + G ++ K I Sbjct: 92 MLPITSQNRIPLLQNGTFDFECGSTTNNAERQQQA--AFSNTIFVVGTRLLVKKGGDIKD 149 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 L+G + V +GTT+E+ L + NMK I Sbjct: 150 FKDLAGKPVVVTSGTTSEILLNKLNEKDNMKMRII 184 >gi|26246629|ref|NP_752669.1| glutamate and aspartate transporter subunit [Escherichia coli CFT073] gi|91209696|ref|YP_539682.1| glutamate and aspartate transporter subunit [Escherichia coli UTI89] gi|117622864|ref|YP_851777.1| glutamate and aspartate transporter subunit [Escherichia coli APEC O1] gi|227884372|ref|ZP_04002177.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli 83972] gi|237707378|ref|ZP_04537859.1| glutamate/aspartate periplasmic binding protein [Escherichia sp. 3_2_53FAA] gi|300989986|ref|ZP_07179062.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 45-1] gi|301049845|ref|ZP_07196784.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 185-1] gi|26107028|gb|AAN79212.1|AE016757_116 Glutamate/aspartate Periplasmic binding protein precursor [Escherichia coli CFT073] gi|91071270|gb|ABE06151.1| glutamate/aspartate periplasmic binding protein precursor [Escherichia coli UTI89] gi|115511988|gb|ABJ00063.1| Glutamate/aspartate Periplasmic binding protein precursor [Escherichia coli APEC O1] gi|226898588|gb|EEH84847.1| glutamate/aspartate periplasmic binding protein [Escherichia sp. 3_2_53FAA] gi|227838458|gb|EEJ48924.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli 83972] gi|300298397|gb|EFJ54782.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 185-1] gi|300407261|gb|EFJ90799.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 45-1] gi|315287098|gb|EFU46512.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 110-3] gi|315292077|gb|EFU51429.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 153-1] gi|324006272|gb|EGB75491.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 57-2] gi|324010380|gb|EGB79599.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 60-1] Length = 325 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 35/155 (22%), Positives = 61/155 (39%), Gaps = 6/155 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 S L I K G + G V F+ G+ D+ A+ A+ + P +++ Sbjct: 53 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 112 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T R+ AF + G + K I Sbjct: 113 LIPITSQNRIPLLQNGTFDFECGSTTNNAERQKQA--AFSDTIFVVGTRLLTKKGGDIKD 170 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + L G ++ V +GTT+E+ L + M I Sbjct: 171 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRII 205 >gi|15807269|ref|NP_295999.1| amino acid ABC transporter periplasmic amino acid-binding protein [Deinococcus radiodurans R1] gi|6460086|gb|AAF11825.1|AE002060_4 amino acid ABC transporter, periplasmic amino acid-binding protein [Deinococcus radiodurans R1] Length = 272 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 44/190 (23%), Positives = 79/190 (41%), Gaps = 10/190 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 S S A+ + ++KK+G L G + F ++G +GFD+D RA++ D ++ Sbjct: 33 SCSAGAASVAEVKKKGTLVLGTDPTFAPFEFKGSDGQVQGFDIDIARAVA---HDLGVRL 89 Query: 79 QYLPLNAKERF-LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-- 135 + P+ A+ S ++D+ + T+ E + + F Y Q FI+ Sbjct: 90 EIRPVGFGALMPQAVTSGRVDVAM--SGITITPERATVVTFSQPYYRSAQVFIVRSGNPG 147 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 + + + G ++ VQA TT + K V++ A R+ R A Sbjct: 148 KFTWPADVKGKTVGVQANTTGQYAAEQTLKPRGATIK--VYDDFAAGLADVRSGRIAALI 205 Query: 196 GDISALYALK 205 GD + LK Sbjct: 206 GDAPTVNDLK 215 >gi|300312810|ref|YP_003776902.1| glutamine ABC transporter/signal transduction system periplasmic protein [Herbaspirillum seropedicae SmR1] gi|300075595|gb|ADJ64994.1| ABC-type glutamine transport/signal transduction system, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 249 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 47/176 (26%), Positives = 74/176 (42%), Gaps = 16/176 (9%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S++G + L +T V F E K + GFD+D A++ I K+Q P++ Sbjct: 17 SVVGASARAETLVVACDTAFVPF-EFKDRNQYVGFDIDLWDAIAKDI-GVTYKLQ--PMD 72 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 ALQ+K +D+ T+ E + F Y G ++ I SV+ L+ Sbjct: 73 FNGIIPALQTKNVDVALAGI--TIKDERKKVIDFSDGYYDSGFSLMVPVGSSIKSVADLA 130 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY---RAHRCDAYTGD 197 G ++ V++GT+ FKA + P ID AY + R DA D Sbjct: 131 GKALAVKSGTSAFDYAKANFKATELHQFP-------NIDNAYLELQTGRVDAAMHD 179 >gi|237730633|ref|ZP_04561114.1| glutamate and aspartate transporter subunit [Citrobacter sp. 30_2] gi|226906172|gb|EEH92090.1| glutamate and aspartate transporter subunit [Citrobacter sp. 30_2] Length = 317 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 53/245 (21%), Positives = 88/245 (35%), Gaps = 36/245 (14%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 S L I K G + G V F+ G+ D+ A+ A+ + P +++ Sbjct: 45 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVDAVKKKLNKPDLQVK 104 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ AF + G + K + Sbjct: 105 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQA--AFSDTIFVVGTRLLAKKGGDVKD 162 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNM-------KYHPIVFERVEE--------IDA 184 + L G ++ V +GTT+E+ L + M K H F +E DA Sbjct: 163 FADLKGKAVVVTSGTTSEVLLHKLNEEQKMDMRIISAKDHGDSFRTLESGRAVAFMMDDA 222 Query: 185 AYRAHRCDAYTGD---------ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 R A D Y L D P ++ D I+K A G+ Sbjct: 223 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPEFKKLMDDTIAK-----AQTSGEA 277 Query: 236 E-WYN 239 E W++ Sbjct: 278 EKWFD 282 >gi|187921593|ref|YP_001890625.1| family 3 extracellular solute-binding protein [Burkholderia phytofirmans PsJN] gi|187720031|gb|ACD21254.1| extracellular solute-binding protein family 3 [Burkholderia phytofirmans PsJN] Length = 312 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 31/142 (21%), Positives = 62/142 (43%), Gaps = 4/142 (2%) Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD-GQGFIMHKKK 135 +++ +P+ ++ R LQ+ ID +T R + + ++FD G ++ + Sbjct: 97 QVRLIPITSQNRISLLQNGTIDFECTSTTNNAARAQQVDFSN---SFFDIGTRLLVRQNS 153 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 GI + L G ++ V AGTT+E ++ + +M + I + E R A Sbjct: 154 GIHDFADLKGKTVVVGAGTTSEKSIRNMNVEKSMGMNIISAKDHSESFLMLSTGRAKAMM 213 Query: 196 GDISALYALKLTNDRPSEHVIL 217 D + L + RP ++ I+ Sbjct: 214 MDDALLAGERAKTSRPEDYAIV 235 >gi|295677112|ref|YP_003605636.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] gi|295436955|gb|ADG16125.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] Length = 329 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 48/222 (21%), Positives = 89/222 (40%), Gaps = 16/222 (7%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFD----VDFCRALSSAIFDDPSK--------IQYL 81 G LK + G+V +A+ + FD V + +A++ I D+ K + + Sbjct: 59 GTLKKIHDDGVVVLGVREASIPFSYFDGKRTVGYSQAIAMQIVDEIRKTLGMTQLRVHEI 118 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD-GQGFIMHKKKGISSV 140 + + R L + QID+ +T T+ RE +A ++F I K GI+ Sbjct: 119 TVTSSNRTPMLLNNQIDLECGSTTHTVERE---NVAAFSDSFFQYAVRMITRKNSGITDF 175 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L+G + AGT+ E L + + +E +A + R A+ D Sbjct: 176 RDLAGKPVVTTAGTSDERLLRSLNTEKQLNMRIMSARDHQEAFSAMKDGRAVAFVMDEPI 235 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 +Y K T+ P + ++ + A +GD + +V+ Sbjct: 236 VYGFKATDPHPDDFIVTGTPLGYEVYACMFRKGDESFRALVN 277 >gi|224283186|ref|ZP_03646508.1| solute binding protein of ABC transporter system [Bifidobacterium bifidum NCIMB 41171] Length = 309 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 2/103 (1%) Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 NG + GFDVD R ++ A+ +I + P+ + R L+S Q+D++ + T E Sbjct: 73 NGGYSGFDVDVARYVAKALGYADKQIVFKPVTPRSRVSMLESAQVDMVVSSFGITERHES 132 Query: 113 SLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGT 154 ++ + P + G I+ + ++G CV AG+ Sbjct: 133 AVTMTG-PYLIVRQDLLVRAADAGDITGIKDMNGRKACVVAGS 174 >gi|324997390|ref|ZP_08118502.1| putative glutamate binding protein [Pseudonocardia sp. P1] Length = 295 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 41/215 (19%), Positives = 88/215 (40%), Gaps = 10/215 (4%) Query: 30 IKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 +++RG + G+ G A G++ GFD+D + ++ + P +I + + + R Sbjct: 54 MQQRGRVVVGVKDDQPGLGFRDATTGEFSGFDIDVAKTVAGGLGFAPDQIDWKVVPSAAR 113 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGAS 147 ++ ++D +T+ + + F Y GQG ++ + I+ L G + Sbjct: 114 EDVIERGEVDYYVGT--YTINDKRKQRVGFAGPYYTAGQGLLVRADENEITGPQTLQGKT 171 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 +C G+T + D N+ + F+ + + DA T D + L L Sbjct: 172 VCSVTGSTPIQRVRD----QNLTTSIVEFQTYTQCVDQLINGQVDAVTTDDAIL--LGYA 225 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + P + ++ + S+ P + DT + V+ Sbjct: 226 SQNPEQLKVVGETFSEEPYGIGVPLNDTAFRTKVN 260 >gi|238755070|ref|ZP_04616418.1| Glutamate/aspartate periplasmic-binding protein [Yersinia ruckeri ATCC 29473] gi|238706774|gb|EEP99143.1| Glutamate/aspartate periplasmic-binding protein [Yersinia ruckeri ATCC 29473] Length = 298 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 35/152 (23%), Positives = 62/152 (40%), Gaps = 6/152 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQYLP 82 L IK G + G V F+ G+ D+ + A+ + P +++ +P Sbjct: 29 LKKIKDNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNLIVDAVKKKLNLPDLQVKLIP 88 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R LQ+ D +T L R+ AF + G + K GI Sbjct: 89 VTSQNRIPLLQNGTFDFECGSTTNNLERQKQA--AFSNTIFVVGTRLLTKKDSGIKDFKD 146 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 L+G ++ V +GTT+E+ L + + M I Sbjct: 147 LAGKAVVVTSGTTSEVLLNKLNEENKMDMRII 178 >gi|308172226|ref|YP_003918931.1| amino acid ABC transporter binding protein [Bacillus amyloliquefaciens DSM 7] gi|307605090|emb|CBI41461.1| similar to amino acid ABC transporter (binding protein) [Bacillus amyloliquefaciens DSM 7] gi|328552036|gb|AEB22528.1| amino acid ABC transporter (binding protein) [Bacillus amyloliquefaciens TA208] gi|328910300|gb|AEB61896.1| amino acid ABC transporter (binding protein)-like protein [Bacillus amyloliquefaciens LL3] Length = 263 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 43/155 (27%), Positives = 63/155 (40%), Gaps = 10/155 (6%) Query: 51 KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 K NG GFDVD A++ I K+ + L LQ+ ++D +S T R Sbjct: 48 KENGKLTGFDVDVMEAVAKKI---NMKLDWKLLEFSGLMGELQTGKLDTISNQVAVTGER 104 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 + + P +Y Q + + K I SV+ L G ++ G+ L K + K Sbjct: 105 KKTYNFT-EPYSYAGTQIVVKNDNKDIKSVNDLKGKTVAAVLGSNHAKNLES--KDPDKK 161 Query: 171 YHPIVFERVEEI--DAAYRAHRCDAYTGDISALYA 203 + +E E D AY R DAY S L A Sbjct: 162 INIKTYETQEGTLKDVAY--GRVDAYVNSRSLLIA 194 >gi|209519485|ref|ZP_03268280.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] gi|209500086|gb|EEA00147.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] Length = 319 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 31/140 (22%), Positives = 56/140 (40%), Gaps = 2/140 (1%) Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 ++ + + + R L + QID+ +T T+ RE AF + I K G Sbjct: 104 RVHEVTVTSSNRTPMLMNNQIDLECGSTTHTVERENVA--AFSDSIFQYAVRMITRKNSG 161 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 I+ + L+G + AGT+ E L + + +E A + R A+ Sbjct: 162 ITDFADLAGKPVVTTAGTSDERLLRSLNTDRQLNMRIMSARDHQEAFTAMKEGRAVAFVM 221 Query: 197 DISALYALKLTNDRPSEHVI 216 D +Y K T+ P + ++ Sbjct: 222 DEPIVYGFKATDPHPDDFIV 241 >gi|114566597|ref|YP_753751.1| glutamine ABC transporter glutamine-binding protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337532|gb|ABI68380.1| glutamine ABC transporter, glutamine-binding protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 263 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 52/188 (27%), Positives = 80/188 (42%), Gaps = 24/188 (12%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 ++G L G F +K +G++ GFD+D RA+ + +++ L A Sbjct: 38 QKGKLIVGTEATFPPFEMIK-DGEYSGFDMDIIRAIGKS---QGYEVEIKNLGFDALIPA 93 Query: 92 LQSKQID--ILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK---GISSVSQLSGA 146 +QS ID I + D + + +P YFD G I+ K+ GI++ L G Sbjct: 94 VQSGNIDCVIAAVTIDEDRAKVVDFS---QP--YFDA-GLIIAVKQETTGITTTKDLQGK 147 Query: 147 SICVQAGTT---TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD--ISAL 201 I Q GTT T L + D + N+K +FE V E + DA D ++A Sbjct: 148 RIAAQVGTTGADTCLKIKDKDPSTNVK----IFESVGEAFMELQKGGVDAVINDHPVTAD 203 Query: 202 YALKLTND 209 Y ND Sbjct: 204 YIKTSGND 211 >gi|300692512|ref|YP_003753507.1| glutamate/aspartate transport protein; ABC superfamily, periplasmic binding component [Ralstonia solanacearum PSI07] gi|299079572|emb|CBJ52250.1| glutamate/aspartate transport protein; ABC superfamily, periplasmic binding component [Ralstonia solanacearum PSI07] Length = 298 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 32/138 (23%), Positives = 58/138 (42%), Gaps = 6/138 (4%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS----KIQYLP 82 L IK G + G+ + F+ G+ D + A+ D +++ +P Sbjct: 29 LKKIKDTGTITLGVRDSSIPFSYNVGGVRTIGYSYDIATKIVEAVKDQLKLKDLQVKEIP 88 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R LQ+ ID+ +T L R+ +F + G ++ K GI + Sbjct: 89 VTSQNRITLLQNGTIDLECGSTTNNLERQKQA--SFTNTIFIIGTRMMVRKDSGIKDWAD 146 Query: 143 LSGASICVQAGTTTELTL 160 L G ++ AGTT+E L Sbjct: 147 LKGKNVVTTAGTTSERLL 164 >gi|152969453|ref|YP_001334562.1| arginine 3rd transport system periplasmic binding protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238893924|ref|YP_002918658.1| arginine 3rd transport system periplasmic binding component [Klebsiella pneumoniae NTUH-K2044] gi|288936334|ref|YP_003440393.1| cationic amino acid ABC transporter periplasmic binding protein [Klebsiella variicola At-22] gi|290510610|ref|ZP_06549980.1| arginine transport system substrate-binding protein [Klebsiella sp. 1_1_55] gi|329998471|ref|ZP_08303108.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Klebsiella sp. MS 92-3] gi|150954302|gb|ABR76332.1| arginine 3rd transport system periplasmic binding protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238546240|dbj|BAH62591.1| arginine 3rd transport system periplasmic binding component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|288891043|gb|ADC59361.1| cationic amino acid ABC transporter, periplasmic binding protein [Klebsiella variicola At-22] gi|289777326|gb|EFD85324.1| arginine transport system substrate-binding protein [Klebsiella sp. 1_1_55] gi|328538661|gb|EGF64757.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Klebsiella sp. MS 92-3] Length = 250 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 39/164 (23%), Positives = 64/164 (39%), Gaps = 28/164 (17%) Query: 47 FAEVKANGDWKGFDVDFCRALSSAI-----FDDPSKIQYLPLNAKERFLALQSKQIDILS 101 F V AN GFDVD AL I F + + +P L+ ++ D + Sbjct: 41 FELVDANNQIVGFDVDLANALCKEIDATCTFTNQAFDSLIP--------GLKFRRFDAVM 92 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 D T RE + + Y+D + ++ +S+ QL G + VQ GTT + + Sbjct: 93 AGMDITPEREKQVLFS---TPYYDNSALFVGQQGKFTSIDQLKGKKVGVQNGTTHQKFIT 149 Query: 162 DYFKAHNMKYHP----IVFERVEEIDAAYRAHRCDAYTGDISAL 201 D HP + ++ + + R DA GD + + Sbjct: 150 D--------KHPEITTVPYDSYQNAKLDLQNGRIDAVFGDTAVV 185 >gi|238786077|ref|ZP_04630035.1| Glutamate/aspartate periplasmic-binding protein [Yersinia bercovieri ATCC 43970] gi|238713016|gb|EEQ05070.1| Glutamate/aspartate periplasmic-binding protein [Yersinia bercovieri ATCC 43970] Length = 309 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 48/249 (19%), Positives = 99/249 (39%), Gaps = 9/249 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQYLP 82 L IK G + G V F+ G+ D+ + A+ + P +++ +P Sbjct: 40 LKKIKDSGVIVVGHRESSVPFSYYDNQQKVVGYAQDYSDLIVDAVKKKLNAPDLQVKLIP 99 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R LQ+ D +T L R+ +F + G + K + Sbjct: 100 ITSQNRIPLLQNGTFDFECGSTTNNLERQQQA--SFSNTIFVVGTRLLTKKGSEVKDFKD 157 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+G ++ V +GTT+E+ L + NM I + + + R A+ D + L Sbjct: 158 LAGKTVVVTSGTTSEVLLNKLNEKDNMNMRIISAKDHGDSFRTLESGRAVAFMMDDALLA 217 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 + +P + I+ S+ + + D + ++ T + TA+ G+ +K+ + Sbjct: 218 GERAKAKKPDQWDIVGTAQSQEAYGCMLRKNDPAFKALLDET---IATAQTSGVAEKSFD 274 Query: 263 QVSKDTTNP 271 + K+ P Sbjct: 275 RWFKNPIPP 283 >gi|291457470|ref|ZP_06596860.1| glutamate-binding protein [Bifidobacterium breve DSM 20213] gi|291381305|gb|EFE88823.1| glutamate-binding protein [Bifidobacterium breve DSM 20213] Length = 279 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 29/135 (21%), Positives = 62/135 (45%), Gaps = 4/135 (2%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 G ++ GI G K +G + GFDVD + ++ + +I + +K+R +Q Sbjct: 36 GKIRIGIKFDQPGLG-FKKSGTYVGFDVDVAKYIAKKLGYSEDEIIWKEAPSKQREAMIQ 94 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQA 152 + +D++ +++ E ++F + GQ ++ K I+ L+G +C Sbjct: 95 NGDVDMILAT--YSITDERKKAVSFAGPYFVAGQDLLVRKDDNSINGPEDLNGKRLCSVT 152 Query: 153 GTTTELTLADYFKAH 167 G+T+ T+ + F + Sbjct: 153 GSTSAATVKEKFASE 167 >gi|213609637|ref|ZP_03369463.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 285 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 47/234 (20%), Positives = 87/234 (37%), Gaps = 6/234 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 S L I K G + G V F+ G+ D+ A+ + + P +++ Sbjct: 13 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEVVKKKLNKPDLQVK 72 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T L R+ AF + G + K I Sbjct: 73 LIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQA--AFSDTIFVVGTRLLTKKGGDIKD 130 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L G ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 131 FPDLKGKAVVVTSGTTSEILLHKLNEEQKMGMRIISAKDHGDSFRTLESGRAVAFMMDDA 190 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 L + +P I+ S+ + + D E+ ++ T T+ E Sbjct: 191 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKNDPEFKKLMDDTIAQAQTSGE 244 >gi|283852210|ref|ZP_06369483.1| extracellular solute-binding protein family 3 [Desulfovibrio sp. FW1012B] gi|283572436|gb|EFC20423.1| extracellular solute-binding protein family 3 [Desulfovibrio sp. FW1012B] Length = 250 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 33/144 (22%), Positives = 65/144 (45%), Gaps = 8/144 (5%) Query: 39 GINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQID 98 GI+ G F V +G GFDV+ ++ + K+++ P++ AL +K+ID Sbjct: 33 GIDFGFPPFGFVDKDGKPTGFDVESLDWIAKKM---GFKVKHQPMDWDGIIPALLAKKID 89 Query: 99 ILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTT 156 I++ T R + + I Y++ ++ K +++ QL SG + +Q GT T Sbjct: 90 IIASGMSATAERAQKVDFS---IPYYEVTQVLVVPAKETATLPQLLTSGKKLGIQRGTVT 146 Query: 157 ELTLADYFKAHNMKYHPIVFERVE 180 L + K+ + ++ + Sbjct: 147 AKLLEEMAAKPEYKFEAVPYDSTD 170 >gi|119898554|ref|YP_933767.1| putative amino acid-binding protein [Azoarcus sp. BH72] gi|119670967|emb|CAL94880.1| putative amino acid-binding protein [Azoarcus sp. BH72] Length = 272 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 30/141 (21%), Positives = 64/141 (45%), Gaps = 13/141 (9%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 A +L +++K G L+ + F V + +G+D+D ++ + K++ +P+ Sbjct: 36 ADVLANVQKAGTLRVAVPQDFPPFGSVGTDLKPRGYDIDMANLIAKELG---VKVELIPV 92 Query: 84 NAKERFLALQSKQIDI----LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 + R L + + D+ L +N D + I A+ P +F+ G + ++ Sbjct: 93 TSTNRIPYLTTGKADLVISSLGKNPDRE--KVIDFSEAYAP--FFN--GVFGPEDVKLTK 146 Query: 140 VSQLSGASICVQAGTTTELTL 160 V +L G ++ V G+ +L L Sbjct: 147 VEELDGKTVGVTRGSVEDLEL 167 >gi|270262369|ref|ZP_06190641.1| hypothetical protein SOD_b05770 [Serratia odorifera 4Rx13] gi|270044245|gb|EFA17337.1| hypothetical protein SOD_b05770 [Serratia odorifera 4Rx13] Length = 263 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 39/175 (22%), Positives = 75/175 (42%), Gaps = 7/175 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 + + + ++ + + S T A+ +L +K+RG L G+ F+ +G+ G Sbjct: 6 VRRQLLLGVMTVALTAGLSAQTYAADNLLQQVKQRGTLIVGLEGTYPPFSFQGEDGNLTG 65 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 F+VDF AL+ I K + P +L+SK+ID++ + R+ + Sbjct: 66 FEVDFANALAQHI---GVKAKLNPTKWDGMLASLESKRIDVVINQVTISDERKKKYDFST 122 Query: 119 RPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 P T Q + +G I+ L G + V GT E L + + +++ + Sbjct: 123 -PYTVSGIQALVKKGNEGTIAKPEDLKGKKVGVGLGTNYEQWLRENVQGVDVRTY 176 >gi|27381499|ref|NP_773028.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] gi|27354667|dbj|BAC51653.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] Length = 275 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 3/79 (3%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 + A D+KK+G + GI + V ++G G D D RA + + K +++ Sbjct: 26 SQAGTPEDVKKKGVVVIGIQGDNPPWGYVDSSGKQDGIDADMGRAFAEYLG---VKAEFV 82 Query: 82 PLNAKERFLALQSKQIDIL 100 PL R AL + ++DIL Sbjct: 83 PLAVANRIPALTTGRVDIL 101 >gi|238927182|ref|ZP_04658942.1| extracellular solute-binding protein [Selenomonas flueggei ATCC 43531] gi|304437127|ref|ZP_07397089.1| ABC superfamily ATP binding cassette transporter, binding protein [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|238884964|gb|EEQ48602.1| extracellular solute-binding protein [Selenomonas flueggei ATCC 43531] gi|304369886|gb|EFM23549.1| ABC superfamily ATP binding cassette transporter, binding protein [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 256 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 6/102 (5%) Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 D++GFD+D RA++ + + ++IQ + + ALQ+K ID++ + T+ E Sbjct: 55 DYQGFDMDLIRAVAKEMGSE-AEIQNIGFDG--LIPALQAKNIDVII--SGMTINDERKE 109 Query: 115 GLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTT 155 +AF Y G ++ ++ I S S L G + Q GTT Sbjct: 110 KVAFSDPYYQSGLTMVVRSDEENIKSFSDLKGHKVAAQIGTT 151 >gi|119490032|ref|ZP_01622656.1| hypothetical protein L8106_20670 [Lyngbya sp. PCC 8106] gi|119454184|gb|EAW35336.1| hypothetical protein L8106_20670 [Lyngbya sp. PCC 8106] Length = 285 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 22/90 (24%), Positives = 41/90 (45%), Gaps = 5/90 (5%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI--- 71 +FF S A++L +IK G LK G+ F A G+W+G+ + L++ + Sbjct: 16 IFFPLPSFGATVLEEIKTTGILKAGVRQDAAPFGYRSATGEWEGYCIALIELLATRLQEQ 75 Query: 72 --FDDPSKIQYLPLNAKERFLALQSKQIDI 99 KI+Y+ + R ++ K + + Sbjct: 76 LNLSQAIKIEYIKSTLENREQIVRDKTVHL 105 >gi|27379672|ref|NP_771201.1| cyclohexadienyl dehydratase [Bradyrhizobium japonicum USDA 110] gi|27352824|dbj|BAC49826.1| probale cyclohexadienyl dehydratase precursorr [Bradyrhizobium japonicum USDA 110] Length = 260 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 7/110 (6%) Query: 6 FVSILCLIILF-FTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDV 61 F+S L + +L ++ + A S L +I KRG L+ G+ F + KA + GFDV Sbjct: 5 FLSALAVALLMNLSAHAQQAAPSRLDEIMKRGTLRVGMTGDYKPFTYLDKATQQFSGFDV 64 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 D AL A+ K++++P + ++ Q DI TL R+ Sbjct: 65 DMAEALGKAL---GVKVEFVPTAWPKLMKDFEADQFDIAMGGVSVTLDRQ 111 >gi|313140336|ref|ZP_07802529.1| solute binding protein of ABC transporter system [Bifidobacterium bifidum NCIMB 41171] gi|313132846|gb|EFR50463.1| solute binding protein of ABC transporter system [Bifidobacterium bifidum NCIMB 41171] Length = 295 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 2/103 (1%) Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 NG + GFDVD R ++ A+ +I + P+ + R L+S Q+D++ + T E Sbjct: 59 NGGYSGFDVDVARYVAKALGYADKQIVFKPVTPRSRVSMLESAQVDMVVSSFGITERHES 118 Query: 113 SLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGT 154 ++ + P + G I+ + ++G CV AG+ Sbjct: 119 AVTMTG-PYLIVRQDLLVRAADAGDITGIKDMNGRKACVVAGS 160 >gi|150395402|ref|YP_001325869.1| extracellular solute-binding protein [Sinorhizobium medicae WSM419] gi|150026917|gb|ABR59034.1| extracellular solute-binding protein family 3 [Sinorhizobium medicae WSM419] Length = 260 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 9/165 (5%) Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F A+G+W+G++++F +A+ + D P+ AL SK+ID++ + Sbjct: 39 FTSPDASGNWQGWEIEFMKAMCAEAKLD---CVVTPVAWDGIIPALTSKKIDMIIGSLSI 95 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFK 165 T R+ ++ F Y G I K I+ + L+G +I VQ T + +F Sbjct: 96 TAERQKTID--FSDKYYNTPTGIIGAKGDDITPTPEGLAGKTIGVQVSTVHQAYAMKHFA 153 Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 ++ ++ +E + A R DA D AL A L +D+ Sbjct: 154 PAGVEVKE--YQTQDEANQDLAAGRVDAVQADAIALDAF-LESDQ 195 >gi|160899853|ref|YP_001565435.1| extracellular solute-binding protein [Delftia acidovorans SPH-1] gi|160365437|gb|ABX37050.1| extracellular solute-binding protein family 3 [Delftia acidovorans SPH-1] Length = 297 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 48/248 (19%), Positives = 94/248 (37%), Gaps = 21/248 (8%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPS- 76 S + A +L ++ G L V F+ + +G G+ +D C L+ A+ Sbjct: 19 SCVSAAGVLDKVQAGGALVIAHRESSVPFSYIDTRSGKPVGYALDLCLRLAEAVRKQTGR 78 Query: 77 ---KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 K+++L + R ++ + D+ +T R ++ AF + G ++ Sbjct: 79 KDMKVEFLMVTPANRMAVIEQGKADMECGSTTNNAQRRQTV--AFTVPHFITGARMLVKA 136 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY-------HPIVFERVEEIDAAY 186 I+++ L G + GT+ + + M H E VE+ +A Sbjct: 137 DSTINAMEDLKGKKLVSTKGTSPMALVTQANRQRLMGITIVEAPDHARALEMVEKGEA-- 194 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 DA+ D L L P ++ +S PLA + + DT + +V Sbjct: 195 -----DAFVMDDVLLNGLAAARPDPRALKVVGKFLSTEPLAIMLPKADTAFKKLVDEEMK 249 Query: 247 AMVTAEEL 254 ++T+ E+ Sbjct: 250 RIITSREI 257 >gi|110640877|ref|YP_668605.1| glutamate and aspartate transporter subunit [Escherichia coli 536] gi|191173985|ref|ZP_03035503.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli F11] gi|215485688|ref|YP_002328119.1| glutamate and aspartate transporter subunit [Escherichia coli O127:H6 str. E2348/69] gi|218557586|ref|YP_002390499.1| glutamate and aspartate transporter subunit [Escherichia coli S88] gi|306812920|ref|ZP_07447113.1| glutamate and aspartate transporter subunit [Escherichia coli NC101] gi|312965095|ref|ZP_07779332.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli 2362-75] gi|331682072|ref|ZP_08382696.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli H299] gi|110342469|gb|ABG68706.1| glutamate/aspartate periplasmic binding protein precursor [Escherichia coli 536] gi|190905761|gb|EDV65382.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli F11] gi|215263760|emb|CAS08096.1| glutamate and aspartate transporter subunit [Escherichia coli O127:H6 str. E2348/69] gi|218364355|emb|CAR02030.1| glutamate and aspartate transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli S88] gi|222032408|emb|CAP75147.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli LF82] gi|294492965|gb|ADE91721.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli IHE3034] gi|305853683|gb|EFM54122.1| glutamate and aspartate transporter subunit [Escherichia coli NC101] gi|307552518|gb|ADN45293.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli ABU 83972] gi|307627914|gb|ADN72218.1| glutamate and aspartate transporter subunit [Escherichia coli UM146] gi|312290186|gb|EFR18069.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli 2362-75] gi|312945195|gb|ADR26022.1| glutamate and aspartate transporter subunit [Escherichia coli O83:H1 str. NRG 857C] gi|320194170|gb|EFW68802.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Escherichia coli WV_060327] gi|323952774|gb|EGB48642.1| extracellular solute-binding protein 3 [Escherichia coli H252] gi|323958407|gb|EGB54113.1| extracellular solute-binding protein 3 [Escherichia coli H263] gi|331080751|gb|EGI51925.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli H299] Length = 302 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 35/155 (22%), Positives = 61/155 (39%), Gaps = 6/155 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 S L I K G + G V F+ G+ D+ A+ A+ + P +++ Sbjct: 30 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T R+ AF + G + K I Sbjct: 90 LIPITSQNRIPLLQNGTFDFECGSTTNNAERQKQA--AFSDTIFVVGTRLLTKKGGDIKD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + L G ++ V +GTT+E+ L + M I Sbjct: 148 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRII 182 >gi|213052442|ref|ZP_03345320.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213425078|ref|ZP_03357828.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] Length = 302 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 47/234 (20%), Positives = 87/234 (37%), Gaps = 6/234 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 S L I K G + G V F+ G+ D+ A+ + + P +++ Sbjct: 30 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEVVKKKLNKPDLQVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T L R+ AF + G + K I Sbjct: 90 LIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQA--AFSDTIFVVGTRLLTKKGGDIKD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L G ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 148 FPDLKGKAVVVTSGTTSEILLHKLNEEQKMGMRIISAKDHGDSFRTLESGRAVAFMMDDA 207 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 L + +P I+ S+ + + D E+ ++ T T+ E Sbjct: 208 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKNDPEFKKLMDDTIAQAQTSGE 261 >gi|206576073|ref|YP_002239486.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Klebsiella pneumoniae 342] gi|206565131|gb|ACI06907.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Klebsiella pneumoniae 342] Length = 243 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 39/164 (23%), Positives = 64/164 (39%), Gaps = 28/164 (17%) Query: 47 FAEVKANGDWKGFDVDFCRALSSAI-----FDDPSKIQYLPLNAKERFLALQSKQIDILS 101 F V AN GFDVD AL I F + + +P L+ ++ D + Sbjct: 34 FELVDANNQIVGFDVDLANALCKEIDATCTFTNQAFDSLIP--------GLKFRRFDAVM 85 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 D T RE + + Y+D + ++ +S+ QL G + VQ GTT + + Sbjct: 86 AGMDITPEREKQVLFS---TPYYDNSALFVGQQGKFTSIDQLKGKKVGVQNGTTHQKFIT 142 Query: 162 DYFKAHNMKYHP----IVFERVEEIDAAYRAHRCDAYTGDISAL 201 D HP + ++ + + R DA GD + + Sbjct: 143 D--------KHPEITTVPYDSYQNAKLDLQNGRIDAVFGDTAVV 178 >gi|323496926|ref|ZP_08101954.1| putative amino-acid ABC transporter-binding protein PatH [Vibrio sinaloensis DSM 21326] gi|323318000|gb|EGA70983.1| putative amino-acid ABC transporter-binding protein PatH [Vibrio sinaloensis DSM 21326] Length = 248 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 75/173 (43%), Gaps = 10/173 (5%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 +K G++ F VK + +GF+VD + + K++Y+ N F L++ Sbjct: 25 VKVGMSGRYFPFTFVKQD-QLQGFEVDLWDEIGKR---NDYKVEYVTANFSGLFGLLETG 80 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 +ID +S T R+ A P Q + I V+ LSG ++ V G+ Sbjct: 81 RIDTISNQITMTDARKAKYLFA-DPYVVDGAQITVRKGNDDIKGVADLSGKTVAVNLGSN 139 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD-ISALYALKLT 207 E L DY K + K + ++ E D A R DA+ D +SAL +K T Sbjct: 140 FEQLLRDYDK--DGKINIKTYDTGIEHDVAL--GRADAFVMDRLSALELIKKT 188 >gi|283783251|ref|YP_003374005.1| extracellular solute-binding protein [Gardnerella vaginalis 409-05] gi|283441644|gb|ADB14110.1| bacterial extracellular solute-binding protein, family 3 [Gardnerella vaginalis 409-05] Length = 277 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 35/164 (21%), Positives = 72/164 (43%), Gaps = 6/164 (3%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F +IL ++ A D KK ++ GI G K +G + GFDVD Sbjct: 8 IFRAILAMLCTICCVMPLTACDRSDGKK--VIRIGIKFDQPGMG-FKKSGTYVGFDVDVA 64 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 + ++ + +I + +K+R LQ+ +D++ T R+ ++F + Sbjct: 65 KYVAKKLGYSEDQIVWKESPSKQRETMLQNGDVDMIVATYSITDARKKM--VSFAGPYFI 122 Query: 125 DGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAH 167 GQ ++ K + +S + L G +C +G+T+ + + + + + Sbjct: 123 AGQDLLIRKDEHKVSGPNDLDGKRLCSVSGSTSAIAIKERYSSK 166 >gi|256377616|ref|YP_003101276.1| extracellular solute-binding protein family 3 [Actinosynnema mirum DSM 43827] gi|255921919|gb|ACU37430.1| extracellular solute-binding protein family 3 [Actinosynnema mirum DSM 43827] Length = 328 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 33/145 (22%), Positives = 66/145 (45%), Gaps = 12/145 (8%) Query: 23 NASILGDIKKRGFLK------CGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDP 75 A + D+K++ LK GI T + G A G + GFDVD R +++ + Sbjct: 49 EAPTVDDLKQQAGLKGKQELVVGIKTDMPGIGLRDPATGAYSGFDVDIARMIAADLGFQA 108 Query: 76 SKIQYLPLNAKE--RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 S ++++ + ++ R +D++ T RE G+AF Y + + ++ + Sbjct: 109 SDVRFVEIQNEDRSRMRGANGVLVDLVIATYSITDRREGMRGVAFSS-PYLETEQSVITR 167 Query: 134 K--KGISSVSQLSGASICVQAGTTT 156 + + I +QL G +C + +T+ Sbjct: 168 EDHEPIREAAQLRGKKVCTLSTSTS 192 >gi|242279378|ref|YP_002991507.1| extracellular solute-binding protein family 3 [Desulfovibrio salexigens DSM 2638] gi|242122272|gb|ACS79968.1| extracellular solute-binding protein family 3 [Desulfovibrio salexigens DSM 2638] Length = 277 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 41/153 (26%), Positives = 72/153 (47%), Gaps = 11/153 (7%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L + KR L+ G +T +A NG++ GF++D + L+S D K++++P Sbjct: 37 STLEKVLKRETLRVGFST-FKPWAMKGKNGEFIGFEIDVAKRLAS---DMGVKVRFIPTK 92 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQ 142 AL + + DI+ T R +L + F F G + +K G SS++ Sbjct: 93 WDGIIPALLTGKFDIIIGGMGITPKR--NLKVNFSDPYEFSGMSIVANKDVAAGKSSLAD 150 Query: 143 LSGAS--ICVQAGTTTELTLADYF-KAHNMKYH 172 + A + V+ GTT E ++ KA +K++ Sbjct: 151 FNNAETRVSVRLGTTAEKAAKNFLPKAKILKFN 183 >gi|239618042|ref|YP_002941364.1| extracellular solute-binding protein family 3 [Kosmotoga olearia TBF 19.5.1] gi|239506873|gb|ACR80360.1| extracellular solute-binding protein family 3 [Kosmotoga olearia TBF 19.5.1] Length = 259 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 20/224 (8%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 T S++ +IK+RG L+ G + G + G+ G +VD + +++ + +++++ Sbjct: 20 TFGSLIDEIKERGVLRVGQDAGYMPLYGTDMYGNRIGLEVDVLKIMATLL---GVRLEFV 76 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 +N AL S++ DI+ + T+ E + + F GQ + + +K ISSV Sbjct: 77 VVNWDGIIPALLSEKFDIIW--SGMTITDERAKKVDFSEPYLKIGQVLVYNNRK-ISSVP 133 Query: 142 QLS-----GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 L I VQ GTT + F + + F+ ++E + R D Sbjct: 134 SLEELNNPSVRIAVQLGTTGDEAARRLFPRAKI----LTFDSMDEAAFQVASGRADFTVV 189 Query: 197 D-ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 D I A Y K DR S + ++ L AI + D E N Sbjct: 190 DSIYAQYVAK-KYDRLS---VADGFLTSEELGVAIRKNDPETLN 229 >gi|311279130|ref|YP_003941361.1| extracellular solute-binding protein family 3 [Enterobacter cloacae SCF1] gi|308748325|gb|ADO48077.1| extracellular solute-binding protein family 3 [Enterobacter cloacae SCF1] Length = 266 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 47/208 (22%), Positives = 89/208 (42%), Gaps = 12/208 (5%) Query: 6 FVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 + ++ + ++ S T A+ +L +K+RG L+ G+ F+ +G GF+V+F Sbjct: 11 LMGVMAVALMAGVSAKTFAAENLLNQVKERGSLRVGLEGTYPPFSFQGDDGKLTGFEVEF 70 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 L+ + K P +L SK+ID++ + R+ + P T Sbjct: 71 ANELAKHL---GVKADLKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDFS-TPYTV 126 Query: 124 FDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Q + +G I + + L G + V GT E L + +++ + + +++ Sbjct: 127 SGIQALVKKGNEGTIKTAADLKGKKVGVGLGTNYEEWLRKNVQGVDIRTYDDDPTKYQDL 186 Query: 183 DAAYRAHRCDAYTGD-ISALYALKLTND 209 R R DA D ++AL +K TND Sbjct: 187 ----RVGRIDAILVDRLAALDLVKKTND 210 >gi|320457693|dbj|BAJ68314.1| glutamate ABC transporter substrate binding component [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 266 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 29/135 (21%), Positives = 62/135 (45%), Gaps = 4/135 (2%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 G ++ GI G K +G + GFDVD + ++ + +I + +K+R +Q Sbjct: 23 GKIRIGIKFDQPGLG-FKKSGTYVGFDVDVAKYIAKKLGYSEDQIIWKEAPSKQREAMIQ 81 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQA 152 + +D++ +++ E ++F + GQ ++ K I+ L+G +C Sbjct: 82 NGDVDMILAT--YSITDERKKAVSFAGPYFVAGQDLLVRKDDNSINGPEDLNGKRLCSVT 139 Query: 153 GTTTELTLADYFKAH 167 G+T+ T+ + F + Sbjct: 140 GSTSAATVKEKFASE 154 >gi|260888234|ref|ZP_05899497.1| putative cysteine ABC transporter, periplasmic cysteine-binding protein [Selenomonas sputigena ATCC 35185] gi|260862068|gb|EEX76568.1| putative cysteine ABC transporter, periplasmic cysteine-binding protein [Selenomonas sputigena ATCC 35185] Length = 285 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 47/180 (26%), Positives = 79/180 (43%), Gaps = 28/180 (15%) Query: 36 LKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSS--AIFDDPSKIQYLPLNAKERFLAL 92 L+ G N F NG +++GFD+D RA++ + D I + L AL Sbjct: 63 LRVGTNADFAPFEFQGENGKEYEGFDMDLARAVAEEMGMTADIQNINFDGL-----IPAL 117 Query: 93 QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQ 151 SK IDI + T+ E + F Y G ++ K I+ L+G ++ VQ Sbjct: 118 VSKNIDIAI--SGMTINDERKKNVLFSEPYYQSGLTIVVKKDNTDINGFKDLAGKTVAVQ 175 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 GTT+ A +K +P + +V+E++++ D + ++ A + NDRP Sbjct: 176 IGTTS---------AKEVKKNPDI--QVKELNSS-----ADTFL-ELKAGGVQAVVNDRP 218 >gi|119963084|ref|YP_948498.1| glutamate-binding protein precursor [Arthrobacter aurescens TC1] gi|119949943|gb|ABM08854.1| Glutamate-binding protein precursor [Arthrobacter aurescens TC1] Length = 291 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 27/122 (22%), Positives = 59/122 (48%), Gaps = 3/122 (2%) Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F + +G GFDV+ +A+++ + KI+++ ++ R ++ ++D++ + Sbjct: 67 FGQKGLDGKPVGFDVEMGKAIAAKLGIPADKIEWVETVSQNRESFIEQGRVDLVIAT--Y 124 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFK 165 T+ +AF Y GQ +++K I+ +SG +C G+T T+A+ + Sbjct: 125 TINDARKEKVAFAGPYYEAGQALLVNKDDTSITKPEDVSGKKVCSVTGSTPAKTIAEKYG 184 Query: 166 AH 167 A Sbjct: 185 AE 186 >gi|293397296|ref|ZP_06641568.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, binding protein [Serratia odorifera DSM 4582] gi|291420214|gb|EFE93471.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, binding protein [Serratia odorifera DSM 4582] Length = 298 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 50/252 (19%), Positives = 96/252 (38%), Gaps = 10/252 (3%) Query: 10 LCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 L L+++ S +A L IK G + G V F+ G+ D+ Sbjct: 8 LSLLLIGMASSVAHAEELTGTLKKIKDNGVIVVGHRESSVPFSYYDNQRKVVGYSQDYSN 67 Query: 66 ALSSAI---FDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + AI + P +++ +P+ ++ R LQ+ D +T + R+ AF Sbjct: 68 QIVEAIKKQLNAPDLQVKMMPITSQNRIPLLQNGTFDFECGSTTNNIERQKQA--AFSDT 125 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + G ++ K + L+G ++ V +GTT+E+ L M I + + Sbjct: 126 IFVVGTRLLVKKGSEVKDFKDLAGKAVVVTSGTTSEVLLNKLNDKDKMNMRIISAKDHGD 185 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + R A+ D + L + +P + I+ SK + + D ++ +V Sbjct: 186 SFRTLESGRAVAFMMDDALLAGERAKAKKPDQWQIIGTAQSKEAYGCMLRKDDPQFKKLV 245 Query: 242 SWTHYAMVTAEE 253 T T+ E Sbjct: 246 DDTIAQAQTSGE 257 >gi|322689657|ref|YP_004209391.1| glutamate ABC transporter substrate-binding protein [Bifidobacterium longum subsp. infantis 157F] gi|320460993|dbj|BAJ71613.1| glutamate ABC transporter substrate binding component [Bifidobacterium longum subsp. infantis 157F] Length = 266 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 29/135 (21%), Positives = 62/135 (45%), Gaps = 4/135 (2%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 G ++ GI G K +G + GFDVD + ++ + +I + +K+R +Q Sbjct: 23 GKIRIGIKFDQPGLG-FKKSGTYVGFDVDVAKYIAKKLGYSEDQIIWKEAPSKQREAMIQ 81 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQA 152 + +D++ +++ E ++F + GQ ++ K I+ L+G +C Sbjct: 82 NGDVDMILAT--YSITDERKKAVSFAGPYFVAGQDLLVRKDDNSINGPEDLNGKRLCSVT 139 Query: 153 GTTTELTLADYFKAH 167 G+T+ T+ + F + Sbjct: 140 GSTSAATVKEKFASE 154 >gi|218688471|ref|YP_002396683.1| glutamate and aspartate transporter subunit [Escherichia coli ED1a] gi|218426035|emb|CAR06852.1| glutamate and aspartate transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli ED1a] Length = 302 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 35/155 (22%), Positives = 61/155 (39%), Gaps = 6/155 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 S L I K G + G V F+ G+ D+ A+ A+ + P +++ Sbjct: 30 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T R+ AF + G + K I Sbjct: 90 LIPITSQNRIPLLQNGTFDFECGSTTNNAERQKQA--AFSNTIFVVGTRLLTKKGGDIKD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + L G ++ V +GTT+E+ L + M I Sbjct: 148 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRII 182 >gi|170690739|ref|ZP_02881905.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] gi|170143988|gb|EDT12150.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] Length = 250 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 45/166 (27%), Positives = 65/166 (39%), Gaps = 17/166 (10%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 L G +T + F E K + GFD+D ++ D K + P++ ALQ++ Sbjct: 28 LVVGTDTSFMPF-EFKQGDKYVGFDLDLWAEIAK---DLGWKYKVQPMDFSGLIPALQTQ 83 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDG-QGFIMHKKKGISSVSQLSGASICVQAGT 154 ID+ T+ E + F Y G + I S+ L+G I + GT Sbjct: 84 NIDVALSGM--TIKEERRKAIDFSDPYYDSGLAAMVQSGNTSIRSIDDLNGKVIAAKTGT 141 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAY---RAHRCDAYTGD 197 T D+ KAH P + ID AY A R DA D Sbjct: 142 AT----IDWIKAH---LKPKEIRQFPNIDQAYLALEAGRVDAAMHD 180 >gi|299066136|emb|CBJ37319.1| glutamate/aspartate ABC transporter,periplasmic binding subunit [Ralstonia solanacearum CMR15] Length = 308 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 34/142 (23%), Positives = 60/142 (42%), Gaps = 14/142 (9%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK--------I 78 L IK+ G + G + F+ ++G+ G+ + +S+ I D K + Sbjct: 37 LAKIKQSGVISVGYRESSIPFSYEASSGNITGY----SQEISNLIVDGVKKKLGLSGLQV 92 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + P+ ++ R LQ+ ID +T L R+ + AF + G ++ K GI Sbjct: 93 KLTPITSQNRIPLLQNGTIDFECGSTTNNLERQKQV--AFSNNIFIYGMLMLVKKGAGIK 150 Query: 139 SVSQLSGASICVQAGTTTELTL 160 L G ++ AGTT + L Sbjct: 151 DFPDLKGKTVVTTAGTTEDRIL 172 >gi|269127494|ref|YP_003300864.1| extracellular solute-binding protein family 3 protein [Thermomonospora curvata DSM 43183] gi|268312452|gb|ACY98826.1| extracellular solute-binding protein family 3 [Thermomonospora curvata DSM 43183] Length = 290 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 31/139 (22%), Positives = 57/139 (41%), Gaps = 15/139 (10%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S+ K+ G L GI K +G ++GFDVD + ++ + + S I + Sbjct: 35 SVAQRAKETGKLTIGIKFDQPALGLQKPDGTYEGFDVDVAKYIAKELGVEESGITWKEAR 94 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-------KKGI 137 ++ R L S Q+D+ ++ S+ +P F G ++ H+ I Sbjct: 95 SENRESFLASNQVDL--------VVATYSITEGRKPKVTFAGPYYVAHQDTMVRADNDDI 146 Query: 138 SSVSQLSGASICVQAGTTT 156 + L G +C AG+ + Sbjct: 147 KKAADLKGKKLCKAAGSNS 165 >gi|17545200|ref|NP_518602.1| amino-acid-binding periplasmic (PBP) ABC transporter protein [Ralstonia solanacearum GMI1000] gi|17427491|emb|CAD14009.1| probable amino-acid-binding periplasmic (pbp) abc transporter protein [Ralstonia solanacearum GMI1000] Length = 313 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 43/227 (18%), Positives = 87/227 (38%), Gaps = 6/227 (2%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS----KIQYLP 82 L IK G + G+ + F+ G+ D + A+ + +++ +P Sbjct: 44 LKKIKDTGTITLGVRDSSIPFSYNVGGVRTIGYSYDVATKVVEAVKEQLKLKDLQVKEIP 103 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R LQ+ ID+ +T L R+ +F + G ++ K GI Sbjct: 104 VTSQNRITLLQNGTIDLECGSTTNNLERQKQA--SFTNTIFIIGTRMMVKKDSGIKDWVD 161 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G ++ AGTT+E L + + I + + + R A+ D + LY Sbjct: 162 LKGKNVVTTAGTTSERLLRKMNDEKQLGMNIISTKDHGQSFLTLESGRAVAFMMDDALLY 221 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 + P++ V++ S+ + + D + + T M+ Sbjct: 222 GERAKAKTPADWVVVGKPQSREAYGCMVRKDDAPFKTLADKTIAGMM 268 >gi|304395669|ref|ZP_07377552.1| extracellular solute-binding protein family 3 [Pantoea sp. aB] gi|304356963|gb|EFM21327.1| extracellular solute-binding protein family 3 [Pantoea sp. aB] Length = 298 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 37/161 (22%), Positives = 68/161 (42%), Gaps = 9/161 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKK---RGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 V++ L+I + + G +KK G + G V F+ G+ D+ Sbjct: 6 VALSLLLIGAAAGAAQAEDLSGTLKKINDNGVIVVGHRESSVPFSYYDNQQKVVGYSQDY 65 Query: 64 CRALSSAI---FDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 A+ AI + P +++ +P+ ++ R LQ+ D +T L R+ AF Sbjct: 66 SNAIVEAIKAKLNKPDLQVKMIPITSQNRIPLLQNGTYDYECGSTTNNLERQKQA--AFS 123 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 + G ++ K I + L G ++ V +GTT+E+ L Sbjct: 124 DTIFVIGTRLLVKKDGPIKDFADLKGKTVVVTSGTTSEVLL 164 >gi|167750530|ref|ZP_02422657.1| hypothetical protein EUBSIR_01506 [Eubacterium siraeum DSM 15702] gi|167656456|gb|EDS00586.1| hypothetical protein EUBSIR_01506 [Eubacterium siraeum DSM 15702] Length = 294 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 51/216 (23%), Positives = 91/216 (42%), Gaps = 16/216 (7%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L +IK G + G+ + F V NG+++G+D+ F L D +I Y+ A Sbjct: 47 LDEIKASGKINIGVFSDKNPFGYVDENGEYQGYDIYFANRLGK---DLGVEINYVSTEAA 103 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD-GQGFIMHKKKGISSVSQLSG 145 R L++ ++DI+ N +T+ E + + F + Y + G + I+S+ Sbjct: 104 NRVEYLETGKVDIILAN--FTVTEERAEKVDF-ALPYMNVALGVVSPDSNVITSLDNWKA 160 Query: 146 AS-ICVQAGTTTELTLA-DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 + V +GTT EL L +Y KY + +A A+ D + + A Sbjct: 161 EDRMIVISGTTAELYLTKNYPDIKLQKYDSYATAK-----SAIENGNGVAWANDNTEVIA 215 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 N V + + S+ +APA+ +G+ N Sbjct: 216 FAKQN--KGYTVGIDSLGSQDTIAPAVSKGNETLLN 249 >gi|332180727|gb|AEE16415.1| ABC-type transporter, periplasmic subunit family 3 [Treponema brennaborense DSM 12168] Length = 269 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 15/135 (11%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF----CRALSSAIFDDPSKIQYLP 82 L ++K RG G++ + D G+D+D CR L + K Q + Sbjct: 32 LEELKTRGVFVLGLDDSFPPLGFRNESNDIAGYDIDLAAEVCRRLGVTL-----KCQPID 86 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD-GQGFIMHKKKGISSVS 141 AKE+ L + ID + T RE +L + +P Y D Q I+ GI +++ Sbjct: 87 WAAKEQ--ELNTGNIDCIWNGFTMTPEREQALSFS-KP--YLDNAQVVIVRGNSGIKTLA 141 Query: 142 QLSGASICVQAGTTT 156 L+G SI +QAG++ Sbjct: 142 DLAGKSIGLQAGSSA 156 >gi|330953422|gb|EGH53682.1| extracellular solute-binding protein [Pseudomonas syringae Cit 7] Length = 214 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 42/195 (21%), Positives = 80/195 (41%), Gaps = 17/195 (8%) Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 R ++ +F+DPSK++++ ++ R L + ++DI + T R + +AF Y Sbjct: 2 RIIAKGLFNDPSKVEFVVQSSDARIPNLLTDKVDISCQFITVTASR--AQQVAFTLPYYR 59 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 +G ++ + L AG + + A + + + +V++ D+ Sbjct: 60 EGVALLLPANSKYKEIDDLKA------AGDDVTVAVLQNVYAEELVHQALPKAKVDQYDS 113 Query: 185 ------AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 A + R D D S++ L + N P + S A A+ +GD +W Sbjct: 114 VDLMYQAINSGRADTAATDQSSVKYLMVQN--PGRYRSPAFAWSPQTYACAVKRGDQDWL 171 Query: 239 NIVSWT-HYAMVTAE 252 N V+ H AM E Sbjct: 172 NFVNTALHEAMTGVE 186 >gi|238758079|ref|ZP_04619259.1| Cystine-binding periplasmic protein [Yersinia aldovae ATCC 35236] gi|238703617|gb|EEP96154.1| Cystine-binding periplasmic protein [Yersinia aldovae ATCC 35236] Length = 272 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 3/75 (4%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S+LG +K+RG L G+ F+ +G GF+VDF L+ + K++ P Sbjct: 38 SLLGQVKERGTLIVGLEGTYPPFSFQGEDGKLTGFEVDFANELAEHM---GVKVKLAPTK 94 Query: 85 AKERFLALQSKQIDI 99 +L+SK+ID+ Sbjct: 95 WDGMLASLESKRIDV 109 >gi|123443206|ref|YP_001007180.1| glutamate and aspartate transporter subunit [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122090167|emb|CAL13030.1| putative amino acid-binding protein precursor [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 304 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 49/249 (19%), Positives = 97/249 (38%), Gaps = 9/249 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQYLP 82 L IK G + G V F+ G+ D+ + AI + P +++ +P Sbjct: 35 LKKIKDNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNLIVDAIKKKLNAPDLQVKLIP 94 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R LQ+ D +T L R+ AF + G + K + Sbjct: 95 ITSQNRIPLLQNGTFDFECGSTTNNLERQQQA--AFSNTIFVVGTRLLTKKGSEVKDFKD 152 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+G + V +GTT+E+ L + M I + + + R A+ D + L Sbjct: 153 LAGKPVVVTSGTTSEVLLNKLNEKDKMNMRIISAKDHGDSFRTLESGRAVAFMMDDALLA 212 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 + +P + I+ S+ + + D + ++ T + TA+ G+ +K+ + Sbjct: 213 GERAKAKKPDQWDIVGTPQSQEAYGCMLRKNDPAFKTLLDET---IATAQTSGVAEKSFD 269 Query: 263 QVSKDTTNP 271 + K+ P Sbjct: 270 RWFKNPIPP 278 >gi|28872292|ref|NP_794911.1| cystine ABC transporter periplasmic cystine binding protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213969395|ref|ZP_03397532.1| cystine ABC transporter, periplasmic cystine binding protein [Pseudomonas syringae pv. tomato T1] gi|301386654|ref|ZP_07235072.1| cystine transporter subunit [Pseudomonas syringae pv. tomato Max13] gi|302061131|ref|ZP_07252672.1| cystine transporter subunit [Pseudomonas syringae pv. tomato K40] gi|302132933|ref|ZP_07258923.1| cystine transporter subunit [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28855546|gb|AAO58606.1| cystine ABC transporter, periplasmic cystine binding protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213925766|gb|EEB59324.1| cystine ABC transporter, periplasmic cystine binding protein [Pseudomonas syringae pv. tomato T1] gi|331016086|gb|EGH96142.1| cystine transporter subunit [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 268 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 52/212 (24%), Positives = 83/212 (39%), Gaps = 10/212 (4%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L IK G L G+ F+ V NG GF+V+F AL+ + K + P Sbjct: 33 LQKIKDSGTLNVGLEGTYPPFSFVDENGKLSGFEVEFSEALAKEL---GVKARIQPSKWD 89 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSG 145 AL SK++D++ + R+ + P T Q ++ K I S + LSG Sbjct: 90 GILAALDSKRLDVVINQVTISDERKKKYDFS-EPYTISGIQALVLKKNADTIKSANDLSG 148 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD-ISALYAL 204 + V GT E L +K + +++++ R DA D ++AL Sbjct: 149 KKVGVGLGTNYEQWLKANVPGAEIKTYEDDPTKIQDLSVG----RIDAILVDRLAALEIA 204 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 T D E S+ A+ +G+ E Sbjct: 205 AKTKDTKRELAPAGAAFSRQESGIALRKGEPE 236 >gi|294787061|ref|ZP_06752315.1| glutamate-binding protein [Parascardovia denticolens F0305] gi|315226711|ref|ZP_07868499.1| glutamate ABC superfamily ATP binding cassette transporter, binding protein [Parascardovia denticolens DSM 10105] gi|294485894|gb|EFG33528.1| glutamate-binding protein [Parascardovia denticolens F0305] gi|315120843|gb|EFT83975.1| glutamate ABC superfamily ATP binding cassette transporter, binding protein [Parascardovia denticolens DSM 10105] Length = 286 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 36/158 (22%), Positives = 69/158 (43%), Gaps = 7/158 (4%) Query: 10 LCLIILFFTSFSTNASILGDIKKRG--FLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 +C +IL T+ + S G ++ + + GI G K NG + GFDVD R + Sbjct: 19 ICSLILALTT-AVGLSACGAVRGKSDHVITIGIKFDQPGLG-YKKNGTYSGFDVDVARYI 76 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 ++ + +I ++ +K+R LQ+ +D++ T R+ ++ A + GQ Sbjct: 77 ANKLGYKDYEINWVEAPSKQRETMLQNGDVDMILATYSITDDRKKTVDFAGPYLVA--GQ 134 Query: 128 GFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYF 164 ++ K I L G +C G+T+ + + Sbjct: 135 DLLVRKDNTNIHGPQDLDGKRLCSVTGSTSATVIKQKY 172 >gi|271501947|ref|YP_003334973.1| Prephenate dehydratase [Dickeya dadantii Ech586] gi|270345502|gb|ACZ78267.1| Prephenate dehydratase [Dickeya dadantii Ech586] Length = 255 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 23/100 (23%), Positives = 49/100 (49%), Gaps = 3/100 (3%) Query: 12 LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI 71 +++L ++ AS L +++RG LK + ++A+G ++G D+ ++L+ ++ Sbjct: 8 MLLLGLAGSASAASHLDQVQERGVLKVCTTGDYKPYTSLRADGSYEGIDIAMAQSLAKSL 67 Query: 72 FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 K++++ + K QS Q DI TL R+ Sbjct: 68 ---GVKVEWVKTSWKTLMPDFQSDQCDIAMGGISVTLERQ 104 >gi|157369898|ref|YP_001477887.1| cationic amino acid ABC transporter periplasmic binding protein [Serratia proteamaculans 568] gi|157321662|gb|ABV40759.1| cationic amino acid ABC transporter, periplasmic binding protein [Serratia proteamaculans 568] Length = 243 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 33/121 (27%), Positives = 53/121 (43%), Gaps = 16/121 (13%) Query: 47 FAEVKANGDWKGFDVDFCRAL-----SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101 F + A +GFDVD AL + F + + +P +L+ K+ D + Sbjct: 34 FEFIDAGNKIQGFDVDLANALCKEMQAECTFTNQAFDSLIP--------SLKFKRFDAVM 85 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 D T RE + L +P Y+D + +K ++ V+ L G + VQ GTT + L Sbjct: 86 AGMDITPEREKQV-LFTKP--YYDNSALFVAQKGKVADVAALKGKKVGVQNGTTHQKYLT 142 Query: 162 D 162 D Sbjct: 143 D 143 >gi|16759617|ref|NP_455234.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29142610|ref|NP_805952.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|25296373|pir||AF0583 ABC transporter periplasmic binding protein (glutamate/ aspartate) STY0710 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16501909|emb|CAD05136.1| ABC transporter periplasmic binding protein (glutamate/aspartate?) [Salmonella enterica subsp. enterica serovar Typhi] gi|29138241|gb|AAO69812.1| ABC transporter periplasmic binding protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 308 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 47/234 (20%), Positives = 87/234 (37%), Gaps = 6/234 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 S L I K G + G V F+ G+ D+ A+ + + P +++ Sbjct: 36 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEVVKKKLNKPDLQVK 95 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T L R+ AF + G + K I Sbjct: 96 LIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQA--AFSDTIFVVGTRLLTKKGGDIKD 153 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L G ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 154 FPDLKGKAVVVTSGTTSEILLHKLNEEQKMGMRIISAKDHGDSFRTLESGRAVAFMMDDA 213 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 L + +P I+ S+ + + D E+ ++ T T+ E Sbjct: 214 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKNDPEFKKLMDDTIAQAQTSGE 267 >gi|209960875|gb|ACJ01666.1| activating enzyme [Acetobacterium dehalogenans] Length = 598 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 6/63 (9%) Query: 247 AMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNY 306 ++ AEELGI NIN K T P + F+G D ++ + LGL KD YR++ +G Sbjct: 296 VVLNAEELGI---NINPTGKITFLPLLGGFVGADTTAVL---LGLPKDDEYRLMIDLGTN 349 Query: 307 GEM 309 GE+ Sbjct: 350 GEI 352 >gi|90962416|ref|YP_536332.1| glutamine-binding protein [Lactobacillus salivarius UCC118] gi|301299224|ref|ZP_07205511.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus salivarius ACS-116-V-Col5a] gi|90821610|gb|ABE00249.1| Glutamine-binding protein [Lactobacillus salivarius UCC118] gi|300215039|gb|ADJ79455.1| Glutamine-binding protein [Lactobacillus salivarius CECT 5713] gi|300853184|gb|EFK80781.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus salivarius ACS-116-V-Col5a] Length = 276 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 7/118 (5%) Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQID-I 99 +T L G +K G +GFDVD +AL+ ++ +K++ + AK + L+++ ID + Sbjct: 49 DTRLFGLMNIK-TGQIEGFDVDMAKALTKKMYGKDAKVKLVQTTAKTKIPLLKNQNIDAV 107 Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQA--GTT 155 ++ T R+I + F + GQ ++ I +V L + V A GTT Sbjct: 108 IAAMTITPERRKI---VEFSQPYFAAGQSLLVPDNSTIKNVHDLDKKGMVVLAVKGTT 162 >gi|255527867|ref|ZP_05394714.1| extracellular solute-binding protein family 3 [Clostridium carboxidivorans P7] gi|255508449|gb|EET84842.1| extracellular solute-binding protein family 3 [Clostridium carboxidivorans P7] Length = 178 Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust. Identities = 35/151 (23%), Positives = 71/151 (47%), Gaps = 10/151 (6%) Query: 29 DIKKRGFLKCGINTGL--VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 +I+++G G++ +GF + K G GFD+D + + + K++ P+ Sbjct: 35 EIQQKGKFVLGLDDSFPPMGFKDDK--GQIIGFDIDMAQEAAKRM---GVKVELKPVQWD 89 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 L+L +K ID++ T R+ + AF + + Q + + I + L+G Sbjct: 90 GVLLSLNNKDIDVIWNGLTITDKRKQQI--AFSKVYLQNKQIIVTNNDSNIKTKKDLAGK 147 Query: 147 SICVQAGTTTELTL-ADYFKAHNMKYHPIVF 176 + +Q G+++E L AD A ++K + +F Sbjct: 148 KVGLQLGSSSETALNADSATAKSIKENKKIF 178 >gi|317047529|ref|YP_004115177.1| cationic amino acid ABC transporter periplasmic-binding protein [Pantoea sp. At-9b] gi|316949146|gb|ADU68621.1| cationic amino acid ABC transporter, periplasmic binding protein [Pantoea sp. At-9b] Length = 243 Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust. Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 16/121 (13%) Query: 47 FAEVKANGDWKGFDVDFCRALSSAI-----FDDPSKIQYLPLNAKERFLALQSKQIDILS 101 F V ++ +GFDVD AL I F + + +P +L+ ++ D + Sbjct: 34 FEFVDSDNKIQGFDVDLANALCKEIDATCTFTNQAFDSLIP--------SLKFRRFDAVM 85 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 D T RE + L +P Y+D + +K ++ V+ L G + VQ GTT + L+ Sbjct: 86 AGMDITPEREKQV-LFTKP--YYDNSAIFIAQKGKLADVAALKGKRVGVQNGTTHQKYLS 142 Query: 162 D 162 D Sbjct: 143 D 143 >gi|310644684|ref|YP_003949443.1| amino acid abc transporter, amino acid-binding protein/permease protein, his/glu/gln/arg/opine family [Paenibacillus polymyxa SC2] gi|309249635|gb|ADO59202.1| Amino acid ABC transporter, amino acid-binding protein/permease protein, His/Glu/Gln/Arg/opine family [Paenibacillus polymyxa SC2] Length = 269 Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust. Identities = 38/165 (23%), Positives = 62/165 (37%), Gaps = 6/165 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V+ + L ++ T + S L G FA + G+D Sbjct: 1 MKKSALVAAIGLSLVLLTGALSGCSSKEAASGDKVLYVGTQNDYPPFAFTNDKNELTGYD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ + + + D KI+++P FLAL + ++ I++ RE F Sbjct: 61 VEVVKEIDKKL--DGYKIEFVPSGWDAIFLALDANKVQIIADEVAKNPEREKK--YLFSD 116 Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADY 163 +YF Q I+ KK I S+ L G + G + L Y Sbjct: 117 ESYFSAQSVIIVKKGRTDIHSLKDLEGKKVAASVGDSYTQLLEQY 161 >gi|46190372|ref|ZP_00206441.1| COG0834: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Bifidobacterium longum DJO10A] gi|322691618|ref|YP_004221188.1| glutamate ABC transporter substrate-binding protein [Bifidobacterium longum subsp. longum JCM 1217] gi|320456474|dbj|BAJ67096.1| glutamate ABC transporter substrate binding component [Bifidobacterium longum subsp. longum JCM 1217] Length = 266 Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust. Identities = 29/135 (21%), Positives = 62/135 (45%), Gaps = 4/135 (2%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 G ++ GI G K +G + GFDVD + ++ + +I + +K+R +Q Sbjct: 23 GKIRIGIKFDQPGLG-FKKSGTYVGFDVDVAKYVAKKLGYSEDQIIWKEAPSKQREAMIQ 81 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQA 152 + +D++ +++ E ++F + GQ ++ K I+ L+G +C Sbjct: 82 NGDVDMILAT--YSITDERKKAVSFAGPYFVAGQDLLVRKDDNSINGPEDLNGKRLCSVT 139 Query: 153 GTTTELTLADYFKAH 167 G+T+ T+ + F + Sbjct: 140 GSTSAATVKEKFASE 154 >gi|323353242|ref|ZP_08087775.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis VMC66] gi|322121188|gb|EFX92951.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis VMC66] Length = 287 Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust. Identities = 44/172 (25%), Positives = 68/172 (39%), Gaps = 29/172 (16%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVG----FAEVKANGDWKGFDVD 62 VS+L + L S S+N + K + G VG F+ +G G+D++ Sbjct: 27 VSVLAIGALVACSSSSN---------KKTEKIKVEVGTVGTTKPFSYEDKDGKLTGYDIE 77 Query: 63 FCRALSSAIFDDPSK--IQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE----ISLGL 116 RA IF D K + + F L S + I + N ++ R + Sbjct: 78 VLRA----IFKDSDKYEVNFNKTKWASIFSGLDSDRYQIGANNISYSEERANKYLYASPY 133 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168 A P ++ K +GI S+ + G S V GT+T L DY K H+ Sbjct: 134 AKNPTV------LVVRKGEGIKSLDDIGGKSTEVVQGTSTAQQLEDYNKEHS 179 >gi|238764882|ref|ZP_04625822.1| Cystine-binding periplasmic protein [Yersinia kristensenii ATCC 33638] gi|238696901|gb|EEP89678.1| Cystine-binding periplasmic protein [Yersinia kristensenii ATCC 33638] Length = 266 Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust. Identities = 50/209 (23%), Positives = 89/209 (42%), Gaps = 17/209 (8%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 V++ I L S++ + +L +K+RG L G+ F+ +G GF+VDF Sbjct: 14 MVAVALAIGLNVKSYAA-SDLLDQVKERGTLIVGLEGTYPPFSFQGEDGKLTGFEVDFAN 72 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 AL+ + K + P +L+SK+ID+ + R+ + T + Sbjct: 73 ALAQHM---GVKAKITPTKWDGMLASLESKRIDVAINQVTISDERKKKYDFS----TPYT 125 Query: 126 GQGFIMHKKKG----ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 G + KKG S L G + V G+ E L + K +++ + + ++ Sbjct: 126 VSGIQVLTKKGNEGNFSKPEDLVGKKVGVGLGSNYEQWLRENLKGVDIRTYDDDPTKYQD 185 Query: 182 IDAAYRAHRCDAYTGD-ISALYALKLTND 209 + R R DA D ++AL +K TN+ Sbjct: 186 L----RVGRTDAILVDRLAALDLVKKTNN 210 >gi|83717600|ref|YP_440544.1| glutamine ABC transporter periplasmic protein [Burkholderia thailandensis E264] gi|167579227|ref|ZP_02372101.1| glutamine ABC transporter periplasmic protein [Burkholderia thailandensis TXDOH] gi|167617348|ref|ZP_02385979.1| glutamine ABC transporter periplasmic protein [Burkholderia thailandensis Bt4] gi|257141205|ref|ZP_05589467.1| glutamine ABC transporter periplasmic protein [Burkholderia thailandensis E264] gi|83651425|gb|ABC35489.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia thailandensis E264] Length = 253 Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust. Identities = 56/204 (27%), Positives = 80/204 (39%), Gaps = 28/204 (13%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + F+ + L SF++ AS L G +T + F E K + GFD Sbjct: 1 MGRRSFIKTFVAVALAGASFASLASAHAKE-----LIVGTDTSFMPF-EFKQGDKYVGFD 54 Query: 61 VDFCRALSSAIFDDPS---KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 +D L + I D KIQ P++ ALQ++ ID+ T+ E + Sbjct: 55 LD----LWAEIAKDAGWTYKIQ--PMDFAGLIPALQTQNIDVALSGM--TIKEERKKAID 106 Query: 118 FRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F Y G ++ I S+ L+G I + GT T D+ KAH P Sbjct: 107 FSDPYYDSGLAAMVQTNDATIKSIDDLNGKVIAAKTGTAT----IDWIKAH---LKPKEI 159 Query: 177 ERVEEIDAAY---RAHRCDAYTGD 197 + ID AY A R DA D Sbjct: 160 RQFPNIDQAYLALEAGRVDAAMHD 183 >gi|23464650|ref|NP_695253.1| glutamate-binding protein of ABC transporter system [Bifidobacterium longum NCC2705] gi|317481691|ref|ZP_07940724.1| bacterial extracellular solute-binding protein, family 3 [Bifidobacterium sp. 12_1_47BFAA] gi|23325209|gb|AAN23889.1| glutamate-binding protein of ABC transporter system [Bifidobacterium longum NCC2705] gi|316916870|gb|EFV38259.1| bacterial extracellular solute-binding protein, family 3 [Bifidobacterium sp. 12_1_47BFAA] Length = 266 Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust. Identities = 29/135 (21%), Positives = 62/135 (45%), Gaps = 4/135 (2%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 G ++ GI G K +G + GFDVD + ++ + +I + +K+R +Q Sbjct: 23 GKIRIGIKFDQPGLG-FKKSGTYVGFDVDVAKYVAKKLGYSEDQIIWKEAPSKQREAMIQ 81 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQA 152 + +D++ +++ E ++F + GQ ++ K I+ L+G +C Sbjct: 82 NGDVDMILAT--YSITDERKKAVSFAGPYFVAGQDLLVRKDDNSINGPEDLNGKRLCSVT 139 Query: 153 GTTTELTLADYFKAH 167 G+T+ T+ + F + Sbjct: 140 GSTSAATVKEKFASE 154 >gi|152970962|ref|YP_001336071.1| cystine transporter subunit [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238895478|ref|YP_002920213.1| cystine transporter subunit [Klebsiella pneumoniae NTUH-K2044] gi|262043452|ref|ZP_06016575.1| amino acid ABC superfamily ATP binding cassette transporter [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|150955811|gb|ABR77841.1| cysteine transport protein (ABC superfamily, peri_bind) [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238547795|dbj|BAH64146.1| cysteine transporter periplasmic binding protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259039194|gb|EEW40342.1| amino acid ABC superfamily ATP binding cassette transporter [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 266 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 47/208 (22%), Positives = 89/208 (42%), Gaps = 12/208 (5%) Query: 6 FVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 + + ++++ S T A+ +L IK+RG L+ G+ F+ +G GF+V+F Sbjct: 11 MMGAMAVVLMAGVSVKTFAAENLLNQIKERGTLRVGLEGTYPPFSFQGDDGKLTGFEVEF 70 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 L+ + K P +L SK+ID++ + R+ + P T Sbjct: 71 ANELAKHL---GVKADLKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDFS-TPYTV 126 Query: 124 FDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Q + +G I + + L G + V GT E L + +++ + + +++ Sbjct: 127 SGVQALVKKGNEGVIKTAADLKGKKVGVGLGTNYEEWLRQNVQGVDVRTYDDDPTKYQDL 186 Query: 183 DAAYRAHRCDAYTGD-ISALYALKLTND 209 R R DA D ++AL +K TN+ Sbjct: 187 ----RVGRIDAILVDRLAALDLVKKTNN 210 >gi|330005974|ref|ZP_08305449.1| glutamate-aspartate periplasmic-binding protein [Klebsiella sp. MS 92-3] gi|328536028|gb|EGF62435.1| glutamate-aspartate periplasmic-binding protein [Klebsiella sp. MS 92-3] Length = 318 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 34/140 (24%), Positives = 59/140 (42%), Gaps = 6/140 (4%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQY 80 + L I K G + G V F+ G+ D+ A+ AI + P +++ Sbjct: 47 NTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVDAIKKKLNKPDLQVKL 106 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +P+ ++ R LQ+ D +T L R+ AF + G ++ K I Sbjct: 107 IPVTSQNRIPLLQNGTFDFECGSTTNNLERQKQA--AFSDTIFVVGTRLLVKKGGPIKDF 164 Query: 141 SQLSGASICVQAGTTTELTL 160 S L ++ V +GTT+E+ L Sbjct: 165 SDLKDKAVVVTSGTTSEILL 184 >gi|300996649|ref|ZP_07181507.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 200-1] gi|300304478|gb|EFJ58998.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 200-1] Length = 325 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 35/155 (22%), Positives = 61/155 (39%), Gaps = 6/155 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 S L I K G + G V F+ G+ D+ A+ A+ + P +++ Sbjct: 53 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 112 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T R+ AF + G + K I Sbjct: 113 LIPITSQNRIPLLQNGTFDFECGSTTNNAERQKQA--AFSDTIFVVGTRLLTKKGGDIKD 170 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + L G ++ V +GTT+E+ L + M I Sbjct: 171 FADLKGKAVVVTSGTTSEVFLNKLNEEQKMNMRII 205 >gi|291533533|emb|CBL06646.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [Megamonas hypermegale ART12/1] Length = 251 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 8/124 (6%) Query: 36 LKCGINTGLVGFAEVKANG--DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 L+ G N F NG +++GFD+D RA++ + ++IQ + + A++ Sbjct: 27 LRVGTNADFAPFEFQDENGSTEYQGFDMDLIRAVAKEM-GYTAEIQNVNFDG--LIPAME 83 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQA 152 S IDI++ + T+ E + F Y G ++ K I+ + L G I VQ Sbjct: 84 SGNIDIIA--SGMTINEERKNQVEFSAPYYISGLTIVVPKDNTDINGFADLKGKKIAVQI 141 Query: 153 GTTT 156 GTT+ Sbjct: 142 GTTS 145 >gi|294631352|ref|ZP_06709912.1| arginine/ornithine binding protein [Streptomyces sp. e14] gi|292834685|gb|EFF93034.1| arginine/ornithine binding protein [Streptomyces sp. e14] Length = 320 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 57/240 (23%), Positives = 104/240 (43%), Gaps = 22/240 (9%) Query: 30 IKKRGFLKCGINTGLVGFAEVK---ANGDWKGFDVDFCRALSSAI-----FDDPSKIQYL 81 I+ +G ++ G + + +A V+ A+G G D D A+ + F + + L Sbjct: 63 IRDKGVIRVGSD---ISYAPVEFKDASGKVAGIDPDLADAMGKQLGVKFDFQNGTFDALL 119 Query: 82 PLNAKERFLALQSKQIDILSRN--TDWTLLREISLGLAFRPITYFDGQGFIMHKK---KG 136 R+ S D +R D T +++ G+ F + Y I +K KG Sbjct: 120 TGLRSNRYDIAMSAMTDNKNRQDGVDPTTGKKVGEGVDF--VDYLQAGVSIYTRKGDTKG 177 Query: 137 ISSVSQLSGASICVQAGTTTE-LTLADYFKAHNMKYHPI-VFERVEEIDAAYRAHRCDAY 194 I+S S L G I V+ GT +E L ++ K K I F+ ++ + R+ DA Sbjct: 178 IASWSDLCGKKIAVERGTVSEDLAKSETKKCPAGKKITIQAFDDNQQAETRLRSGGADAV 237 Query: 195 TGDIS-ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 + D A YA+K T+ + I+ D + +P A+ + +T+ + + A++ + E Sbjct: 238 SADFPVAAYAVK-TSGGGKDFEIVGDQVEAAPYGIAVGKSNTQLRDALQAAMDAVIKSGE 296 >gi|330859510|emb|CBX69853.1| cystine-binding periplasmic protein [Yersinia enterocolitica W22703] Length = 266 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 47/189 (24%), Positives = 80/189 (42%), Gaps = 16/189 (8%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 +L +K+RG L G+ F+ +G GF+VDF AL+ + K + P Sbjct: 33 LLDQVKERGTLIVGLEGTYPPFSFQGEDGKLTGFEVDFANALAEHM---GVKAKITPTKW 89 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG----ISSVS 141 +L+SK+ID+ + R+ + T + G + KKG S Sbjct: 90 DGMLASLESKRIDVAINQVTISDERKKKYDFS----TPYTVSGIQVLTKKGNEGKFSKPE 145 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD-ISA 200 L G + V G+ E L + K +++ + + +++ R R DA D ++A Sbjct: 146 DLVGKKVGVGLGSNYEQWLRENLKGVDIRTYDDDPTKYQDL----RVGRTDAILVDRLAA 201 Query: 201 LYALKLTND 209 L +K TND Sbjct: 202 LDLVKKTND 210 >gi|15807148|ref|NP_295877.1| amino acid ABC transporter periplasmic amino acid-binding protein [Deinococcus radiodurans R1] gi|6459952|gb|AAF11702.1|AE002049_7 amino acid ABC transporter, periplasmic amino acid-binding protein [Deinococcus radiodurans R1] Length = 305 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 48/182 (26%), Positives = 73/182 (40%), Gaps = 21/182 (11%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 S A +IKK G +K F +K GF+VD AL + K+++ Sbjct: 71 SAEARTWAEIKKSGTIKVATEGAFPPFNLMKGK-QLTGFEVDLANALGKQLG---LKVEW 126 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + L + D + + T R+ ++ F Y G G I+ + G + Sbjct: 127 TVQPFDSLLIGLNQDRYDFVIASHGITPERQKAVD--FSDPHYCTG-GAIVTRPGGPLTA 183 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV-----FERVEEIDAAYRAHRCDAYT 195 L+G S+ VQ GTT Y + N++ P V F R + AA A R DA+ Sbjct: 184 KALAGKSVAVQVGTT-------YLE--NVRKVPGVGDVKTFPRDVDAQAALMAGRVDAWV 234 Query: 196 GD 197 GD Sbjct: 235 GD 236 >gi|318605287|emb|CBY26785.1| cystine ABC transporter, periplasmic cystine-binding protein FliY [Yersinia enterocolitica subsp. palearctica Y11] Length = 253 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 47/189 (24%), Positives = 80/189 (42%), Gaps = 16/189 (8%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 +L +K+RG L G+ F+ +G GF+VDF AL+ + K + P Sbjct: 20 LLDQVKERGTLIVGLEGTYPPFSFQGEDGKLTGFEVDFANALAEHM---GVKAKITPTKW 76 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG----ISSVS 141 +L+SK+ID+ + R+ + T + G + KKG S Sbjct: 77 DGMLASLESKRIDVAINQVTISDERKKKYDFS----TPYTVSGIQVLTKKGNEGKFSKPE 132 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD-ISA 200 L G + V G+ E L + K +++ + + +++ R R DA D ++A Sbjct: 133 DLVGKKVGVGLGSNYEQWLRENLKGVDIRTYDDDPTKYQDL----RVGRTDAILVDRLAA 188 Query: 201 LYALKLTND 209 L +K TND Sbjct: 189 LDLVKKTND 197 >gi|330000991|ref|ZP_08303862.1| cystine-binding periplasmic protein [Klebsiella sp. MS 92-3] gi|328537826|gb|EGF64020.1| cystine-binding periplasmic protein [Klebsiella sp. MS 92-3] Length = 266 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 47/208 (22%), Positives = 89/208 (42%), Gaps = 12/208 (5%) Query: 6 FVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 + + ++++ S T A+ +L IK+RG L+ G+ F+ +G GF+V+F Sbjct: 11 MMGAMAVVLMAGVSVKTFAAENLLNQIKERGTLRVGLEGTYPPFSFQGDDGKLTGFEVEF 70 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 L+ + K P +L SK+ID++ + R+ + P T Sbjct: 71 ANELAKHL---GVKADLKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDFS-TPYTV 126 Query: 124 FDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Q + +G I + + L G + V GT E L + +++ + + +++ Sbjct: 127 SGVQALVKKGNEGAIKTAADLKGKKVGVGLGTNYEEWLRQNVQGVDVRTYDDDPTKYQDL 186 Query: 183 DAAYRAHRCDAYTGD-ISALYALKLTND 209 R R DA D ++AL +K TN+ Sbjct: 187 ----RVGRIDAILVDRLAALDLVKKTNN 210 >gi|270290989|ref|ZP_06197212.1| polar amino acid transport system substrate-binding protein [Pediococcus acidilactici 7_4] gi|270280385|gb|EFA26220.1| polar amino acid transport system substrate-binding protein [Pediococcus acidilactici 7_4] Length = 272 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 42/213 (19%), Positives = 91/213 (42%), Gaps = 14/213 (6%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS-KIQYLPLNAKER 88 I+ + + G++ V + NG G+D+D R A+F K+ + ++ Sbjct: 40 IQAKHHVVIGLDDSFVPMGFRQKNGKLAGYDIDLAR----AVFKQYGIKVDFQTIDWSMN 95 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 L+++ +D++ T+ E +AF + Q ++ K + I S ++G ++ Sbjct: 96 VTELRNQTVDLIWNGL--TITDERQRAMAFSEPYLVNQQVLVVKKSQHIHSPQDMTGKTL 153 Query: 149 CVQAGTTTELTLADY---FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD-ISALYAL 204 VQ+G++ + + K K+ P++++ +A R D + A Y L Sbjct: 154 GVQSGSSGAQDIDRFPKLLKQRIKKHTPVLYDTFNNAFIDLKADRIQGLLIDSVYANYYL 213 Query: 205 K-LTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + L N P ++ ++ + A I +G+ E Sbjct: 214 QHLPN--PGDYRVIKSGMPNEYFAVGIKKGNQE 244 >gi|156393328|ref|XP_001636280.1| predicted protein [Nematostella vectensis] gi|156223382|gb|EDO44217.1| predicted protein [Nematostella vectensis] Length = 625 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 41/169 (24%), Positives = 76/169 (44%), Gaps = 28/169 (16%) Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+ +C + T D F+ N+ + + ++++ DA R HR DI L Sbjct: 223 LTSFELCAETSPT-----VDLFETLNVSHPDLTVKQLK--DALRRIHR-----NDIICLL 270 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQG--DTEWYNIVSWTHYAMVTAEELGITQKN 260 ++ SE+ + D+ K P I + D +I W +AM +LG+T+K+ Sbjct: 271 ------EKYSENWNVSDLCHKVPEFIEIFKARLDIRSNSIGDWKSFAM----QLGLTKKH 320 Query: 261 INQVSKDTTNPDVQRFL---GIDKSSNIGEALGLTKDWTYR-IIRHMGN 305 ++ + T+P FL GI+ +++I + KD ++RH+ N Sbjct: 321 VDTFGEPKTSPTENLFLYLSGINDTTSISQLRDHLKDMERNDVVRHLNN 369 >gi|323141554|ref|ZP_08076439.1| putative cyclohexadienyl dehydratase [Phascolarctobacterium sp. YIT 12067] gi|322413966|gb|EFY04800.1| putative cyclohexadienyl dehydratase [Phascolarctobacterium sp. YIT 12067] Length = 263 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 56/248 (22%), Positives = 99/248 (39%), Gaps = 25/248 (10%) Query: 10 LCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFD 60 LC+ L T+ S A + D++ RG L G + + K G ++GFD Sbjct: 7 LCVGALLATTICGMGALTPSAEAGKIEDVQARGILLVGSTGDYKPMSYLNKETGKYEGFD 66 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ L+ ++ K+QY+P K + + DI T RE + ++ Sbjct: 67 VEVAELLAQSL---GVKVQYVPTTWKTLQADTMAGKFDIAMCGVTRTFAREQKMNMSHGY 123 Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASI--CVQAGTTTELTLADYFKAHNMKYHPIVF 176 +T+ G+ + K K +S + L+ S+ V G T E + HP Sbjct: 124 LTF--GKTILCRKADAKKFTSEADLNKNSVRVMVNPGGTNEKFALSNLPNCTLLVHP--- 178 Query: 177 ERVEEIDAAYRAHRCDAY-TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + EI A + D T + A ++ +D +L D +K+ + +GD Sbjct: 179 -QNAEIPALIAEGKADVMITETMEARRYVR--DDARLAAPLLDDPFTKNHFGILMAKGDQ 235 Query: 236 EWYNIVSW 243 +W N V++ Sbjct: 236 DWLNYVNF 243 >gi|300690821|ref|YP_003751816.1| glutamate/aspartate ABC transporter,periplasmic binding subunit [Ralstonia solanacearum PSI07] gi|299077881|emb|CBJ50520.1| glutamate/aspartate ABC transporter,periplasmic binding subunit [Ralstonia solanacearum PSI07] Length = 308 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 34/142 (23%), Positives = 62/142 (43%), Gaps = 14/142 (9%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD-------PS-KI 78 L I++ G + G + F+ ++G+ G+ + +S+ I D PS ++ Sbjct: 37 LAKIRQSGVISVGYRESSIPFSYEASSGNITGY----SQEISNLIIDGVKKKLGLPSLQV 92 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + P+ ++ R LQ+ ID +T L R+ + AF + G ++ K GI Sbjct: 93 KLTPITSQNRIPLLQNGTIDFECGSTTNNLERQKQV--AFSNNIFIYGMLMLVKKDGGIK 150 Query: 139 SVSQLSGASICVQAGTTTELTL 160 L G ++ AGTT + L Sbjct: 151 DFPDLKGKTVVTTAGTTEDRIL 172 >gi|88855455|ref|ZP_01130119.1| putative glutamate transporter glutamate-binding protein [marine actinobacterium PHSC20C1] gi|88815362|gb|EAR25220.1| putative glutamate transporter glutamate-binding protein [marine actinobacterium PHSC20C1] Length = 289 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 25/113 (22%), Positives = 58/113 (51%), Gaps = 4/113 (3%) Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 +G+ GFDV+ + +++++ I+++ + R +++ +DI+ +T+ + Sbjct: 71 SGEPVGFDVEMGKIIAASLGISEDNIEWVETVSANRETFIENGTVDIVIAT--YTINDKR 128 Query: 113 SLGLAFRPITYFDGQGFIM--HKKKGISSVSQLSGASICVQAGTTTELTLADY 163 ++F Y GQ ++ +GI+ L+G +C AG+T+E +A+Y Sbjct: 129 KEVISFAGPYYNAGQDILVLEGNPEGITGPEDLAGKDVCSVAGSTSEKNIAEY 181 >gi|304385261|ref|ZP_07367606.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Pediococcus acidilactici DSM 20284] gi|304328468|gb|EFL95689.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Pediococcus acidilactici DSM 20284] Length = 272 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 42/213 (19%), Positives = 90/213 (42%), Gaps = 14/213 (6%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS-KIQYLPLNAKER 88 I+ + + G++ V + NG G+D+D R A+F K+ + ++ Sbjct: 40 IQAKHHVVIGLDDSFVPMGFRQKNGKLAGYDIDLAR----AVFKQYGIKVDFQTIDWSMN 95 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 L+++ +D++ T+ E + F + Q ++ K + I S ++G ++ Sbjct: 96 VTELRNQTVDLIWNGL--TITDERQRAMTFSEPYLVNQQVLVVKKSQHIHSPQDMTGKTL 153 Query: 149 CVQAGTTTELTLADY---FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD-ISALYAL 204 VQ+G++ + Y K K+ P++++ +A R D + A Y L Sbjct: 154 GVQSGSSGAQDIDRYPKLLKQRIKKHTPVLYDTFNNAFIDLKADRIQGLLIDSVYANYYL 213 Query: 205 K-LTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + L N P ++ ++ + A I +G+ E Sbjct: 214 QHLPN--PGDYRVIKSGMPNEYFAVGIKKGNQE 244 >gi|213586697|ref|ZP_03368523.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 180 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 34/150 (22%), Positives = 59/150 (39%), Gaps = 6/150 (4%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 S L I K G + G V F+ G+ D+ A+ + + P +++ Sbjct: 30 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEVVKKKLNKPDLQVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T L R+ AF + G + K I Sbjct: 90 LIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQA--AFSDTIFVVGTRLLTKKGGDIKD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNM 169 L G ++ V +GTT+E+ L + M Sbjct: 148 FPDLKGKAVVVTSGTTSEILLHKLNEEQKM 177 >gi|170767654|ref|ZP_02902107.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia albertii TW07627] gi|170123142|gb|EDS92073.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia albertii TW07627] Length = 302 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 35/155 (22%), Positives = 61/155 (39%), Gaps = 6/155 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 S L I K G + G V F+ G+ D+ A+ A+ + P +++ Sbjct: 30 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T L R+ AF + G + K I Sbjct: 90 LIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQA--AFSDTIFVVGTRLLTKKGGDIKD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + L ++ V +GTT+E+ L + M I Sbjct: 148 FADLKDKAVVVTSGTTSEVLLNKLNEEQKMNMRII 182 >gi|55377279|ref|YP_135129.1| glutamine ABC transporter permease protein [Haloarcula marismortui ATCC 43049] gi|55230004|gb|AAV45423.1| glutamine ABC transporter permease protein [Haloarcula marismortui ATCC 43049] Length = 262 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 36/129 (27%), Positives = 57/129 (44%), Gaps = 7/129 (5%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 L G G F E+K +G+ GFDV+ A+ +A + S + L K AL + Sbjct: 38 LTAGTAPGFPPF-EMKQDGELVGFDVELLEAVVAATEYELSGWEELEF--KSLIPALNNG 94 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI--SSVSQLSGASICVQAG 153 +D+++ T+ E + F Y Q I+ + SS+ LS A++ Q G Sbjct: 95 NVDVVAAG--MTINDERDKAIDFSDPYYSSNQAIIVRENGSFSPSSLEDLSEAAVGAQKG 152 Query: 154 TTTELTLAD 162 TT E + D Sbjct: 153 TTGESVIKD 161 >gi|170724142|ref|YP_001751830.1| cystine transporter subunit [Pseudomonas putida W619] gi|169762145|gb|ACA75461.1| extracellular solute-binding protein family 3 [Pseudomonas putida W619] Length = 264 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 40/154 (25%), Positives = 67/154 (43%), Gaps = 9/154 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 ++IL LF +F+ L I+++G + G+ F+ NG GF+V+F Sbjct: 13 LAILLGTGLFSQAFAGEQ--LKTIQEKGVINVGLEGTYPPFSFQDENGKLAGFEVEFSEL 70 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + +KIQ P AL+SK++D++ + R+ + P T Sbjct: 71 LAKEL-GVKAKIQ--PTKWDGILAALESKRLDVVVNQVTISEERKKKYDFS-EPYTVSGI 126 Query: 127 QGFIMHKKK---GISSVSQLSGASICVQAGTTTE 157 Q I+ KK I + L+G + V GT E Sbjct: 127 QALILKKKAEQLNIKTAQDLAGKKVGVGLGTNYE 160 >gi|37678192|ref|NP_932801.1| ABC-type amino acid transport system, periplasmic component [Vibrio vulnificus YJ016] gi|37196931|dbj|BAC92772.1| ABC-type amino acid transport system, periplasmic component [Vibrio vulnificus YJ016] Length = 250 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 46/173 (26%), Positives = 75/173 (43%), Gaps = 10/173 (5%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 +K G++ F VK + +GF+VD + + K++Y+ N F L++ Sbjct: 27 VKVGMSGRYFPFTFVKQD-QLQGFEVDMWDEIGKR---NGYKVEYVTANFSGLFGLLETG 82 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 +ID +S T R+ A P Q + I V+ L+G ++ V G+ Sbjct: 83 RIDTISNQITMTDARKAKYLFA-DPYVVDGAQITVRKGNDSIKGVADLAGKTVAVNLGSN 141 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD-ISALYALKLT 207 E L DY K + K + ++ E D A R DA+ D +SAL +K T Sbjct: 142 FEQLLRDYDK--DGKINIKTYDTGIEHDVAL--GRADAFVMDRLSALELIKKT 190 >gi|332160868|ref|YP_004297445.1| glutamate and aspartate transporter subunit [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325665098|gb|ADZ41742.1| glutamate and aspartate transporter subunit [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330863400|emb|CBX73522.1| glutamate/aspartate periplasmic-binding protein [Yersinia enterocolitica W22703] Length = 304 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 49/249 (19%), Positives = 97/249 (38%), Gaps = 9/249 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQYLP 82 L IK G + G V F+ G+ D+ + AI + P +++ +P Sbjct: 35 LKKIKDNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNLIVDAIKKKLNAPDLQVKLIP 94 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R LQ+ D +T L R+ AF + G + K + Sbjct: 95 ITSQNRIPLLQNGTFDFECGSTTNNLERQQQA--AFSNTIFVVGTRLLTKKGSEVKDFKD 152 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+G + V +GTT+E+ L + M I + + + R A+ D + L Sbjct: 153 LAGKPVVVTSGTTSEVLLNKLNEKDKMNMRIISAKDHGDSFRTLESGRAVAFMMDDALLA 212 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 + +P + I+ S+ + + D + ++ T + TA+ G+ +K+ + Sbjct: 213 GERAKAKKPDQWDIVGTPQSQEAYGCMLRKDDPAFKTLLDET---IATAQTSGVAEKSFD 269 Query: 263 QVSKDTTNP 271 + K+ P Sbjct: 270 RWFKNPIPP 278 >gi|226330763|ref|ZP_03806281.1| hypothetical protein PROPEN_04683 [Proteus penneri ATCC 35198] gi|225201558|gb|EEG83912.1| hypothetical protein PROPEN_04683 [Proteus penneri ATCC 35198] Length = 244 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 38/149 (25%), Positives = 59/149 (39%), Gaps = 22/149 (14%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI--- 71 + F + T+ ++ ++ ++ F + AN GFDVD A+ + I Sbjct: 4 ILFAALLTSITLSATAAEKETIRFATEATYPPFEMIDANNQIVGFDVDLANAMCAKINAD 63 Query: 72 --FDDPSKIQYLPLNAKERFLALQSKQIDIL---SRNTDWTLLREISLGLAFRPITYFDG 126 F + S +P RF AL + IDI + D+T +Y+D Sbjct: 64 CTFTNQSFDSLIPSLKFRRFEALMAG-IDITPERQKQVDFT-------------DSYYDN 109 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTT 155 + K IS V+ L G I VQ GTT Sbjct: 110 SAVFITVKGKISDVANLKGKQIGVQNGTT 138 >gi|126641446|ref|YP_001084430.1| putative ABC transporter [Acinetobacter baumannii ATCC 17978] Length = 158 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 41/152 (26%), Positives = 65/152 (42%), Gaps = 21/152 (13%) Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV----FERVEEID 183 G + K I+ V+QL ++ V GTT AD F K HP + +E+ E Sbjct: 14 GVVSPKSHPITDVAQLKDKTLLVNKGTT-----ADSF---FTKTHPEIKLQKYEQNTETF 65 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 A + R A D L L + P+ V + ++ + +APA+ +GD E N W Sbjct: 66 DALKDGRGAALAHD--NLLVLAWAKENPNYTVGITNLGEQDLIAPAVKKGDKELLN---W 120 Query: 244 THYAMVTAEELGIT----QKNINQVSKDTTNP 271 + + + G+ +K + V DT NP Sbjct: 121 LNQDLEKLAKEGVIHQAYEKTLKPVYGDTINP 152 >gi|120403686|ref|YP_953515.1| extracellular solute-binding protein [Mycobacterium vanbaalenii PYR-1] gi|119956504|gb|ABM13509.1| amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium vanbaalenii PYR-1] Length = 237 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 53/206 (25%), Positives = 86/206 (41%), Gaps = 13/206 (6%) Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G D+D AL+ A+ ++ I Y + F L + D + T T RE A Sbjct: 23 GLDIDVMTALADALGENAEFIAYDGADFDGIFERLAAGDYDCVIAGTTVTPARERKA--A 80 Query: 118 FRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F P GQG + + + SV L+G +I VQ G T+E ++A A V Sbjct: 81 FLPPYVISGQGLAVDTTRLPHVHSVDDLAGLTIGVQRGNTSE-SIAGRLVADGKAARVRV 139 Query: 176 FE--RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 ++ + A A CDA ++ + A +L D P V+ + +S +A A+ Sbjct: 140 YDYGAISTAIADLVAGGCDAVM-KLAPVLA-ELVKDVPGVEVVQRN-LSAENIAIAVNPA 196 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQK 259 D + +++ A EE G Q+ Sbjct: 197 DQQ---LLARLQVAQAELEEDGTMQR 219 >gi|213647483|ref|ZP_03377536.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 201 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 33/140 (23%), Positives = 57/140 (40%), Gaps = 6/140 (4%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQY 80 S L I K G + G V F+ G+ D+ A+ + + P +++ Sbjct: 31 STLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEVVKKKLNKPDLQVKL 90 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +P+ ++ R LQ+ D +T L R+ AF + G + K I Sbjct: 91 IPITSQNRIPLLQNGTFDFECGSTTNNLERQKQA--AFSDTIFVVGTRLLTKKGGDIKDF 148 Query: 141 SQLSGASICVQAGTTTELTL 160 L G ++ V +GTT+E+ L Sbjct: 149 PDLKGKAVVVTSGTTSEILL 168 >gi|300722507|ref|YP_003711797.1| arginine ABC transporter periplasmic-binding protein [Xenorhabdus nematophila ATCC 19061] gi|297629014|emb|CBJ89599.1| arginine transport protein (ABC superfamily, peri_bind) [Xenorhabdus nematophila ATCC 19061] Length = 245 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 45/230 (19%), Positives = 89/230 (38%), Gaps = 18/230 (7%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 L FT+ + ++ ++ L+ F + N +GFD+D A+ I Sbjct: 4 LLFTALLSVMALSATAAEKTTLRFATEATYPPFEFIDTNNKIQGFDIDLTNAICEKI--- 60 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 S+ + +L+ ++ D L D T R+ + TY+D + K Sbjct: 61 NSECTFTNQAFDSLIPSLKFRRFDALMAGIDITPERQKQVDFTH---TYYDNSAIFIAIK 117 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 S+++ L I +Q GTT + Y + + + ++ + + R DA Sbjct: 118 GKFSNIADLKNKQIGIQNGTTHQ----KYLMEQHKEIKTVPYDSYQNAILDLKNGRIDAV 173 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGDTEWYN 239 GD + ++ N E V + + ++ + L A+ +G+TE N Sbjct: 174 FGDTAVVHEWLRKN---KELVTIGNKVTDKNYFGTGLGIAVRKGNTELLN 220 >gi|325293281|ref|YP_004279145.1| arginine-binding periplasmic protein [Agrobacterium sp. H13-3] gi|325061134|gb|ADY64825.1| arginine-binding periplasmic protein [Agrobacterium sp. H13-3] Length = 257 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 62/155 (40%), Gaps = 9/155 (5%) Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F ++A+G GFD+D +AL + ++ ++ + ALQ+K+ D + + Sbjct: 40 FNNLEADGTLTGFDIDIAKALCVEM---KAECTFVTNDWDGIIPALQAKKFDAIIASMSI 96 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T R + F Y + K I SV L G S+ Q TT +F Sbjct: 97 TPERLQKVD--FSKKYYNTPPAIAVPKDSPIKSVDDLKGKSLGAQGSTTHSNYAEKHFPG 154 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 ++K +P E +I R DA DI L Sbjct: 155 SDLKMYPTADEYKLDISNG----RIDAVIDDIVVL 185 >gi|257462599|ref|ZP_05627009.1| extracellular solute-binding protein, family 3 [Fusobacterium sp. D12] Length = 241 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 48/196 (24%), Positives = 72/196 (36%), Gaps = 25/196 (12%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K FV I CL+ G K+ L G N F E + KGFD++ Sbjct: 5 KRIFVVICCLLCF----------ACGKGKEEATLVVGTNPEFAPF-EYMEGEEIKGFDIE 53 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + + I K++ +N ALQSK+ID++ T R+ + Sbjct: 54 LMKQIGEKI---GKKVEIKSMNFDGLLPALQSKKIDVVIAGMTATEERKKHVNFT---KN 107 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y+ Q IM K+ + L G I V G T ++ ++ H ER Sbjct: 108 YYISQQNIMVKENKEHDLEALKGQKIGVVLGYTGDVFISS--------KHEYAVERFNSA 159 Query: 183 DAAYRAHRCDAYTGDI 198 AA A + D + I Sbjct: 160 SAAILALQADKVSAVI 175 >gi|329116401|ref|ZP_08245118.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus parauberis NCFD 2020] gi|326906806|gb|EGE53720.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus parauberis NCFD 2020] Length = 278 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 32/136 (23%), Positives = 63/136 (46%), Gaps = 7/136 (5%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS-KIQ 79 ST + + KK + G + V +G GFDV+ L+ A+FD K++ Sbjct: 28 STKSDGWANYKKTKTITLGFDNTFVPMGYKDESGKNTGFDVE----LAKAVFDQYGIKVK 83 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 + P+N + L++ +ID++ +++ +E +AF + Q + K I+S Sbjct: 84 FQPINWDLKETELKNGKIDMIWNG--YSITKERQAKVAFSNPYMKNEQVLVTKKSANITS 141 Query: 140 VSQLSGASICVQAGTT 155 S + G + Q+G++ Sbjct: 142 FSGMKGKVLGAQSGSS 157 >gi|238798559|ref|ZP_04642036.1| Cystine-binding periplasmic protein [Yersinia mollaretii ATCC 43969] gi|238717579|gb|EEQ09418.1| Cystine-binding periplasmic protein [Yersinia mollaretii ATCC 43969] Length = 272 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 47/190 (24%), Positives = 80/190 (42%), Gaps = 16/190 (8%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 A +L +K+RG L G+ F+ +G GF+VDF AL+ + K + P Sbjct: 37 ADLLNQVKERGTLIVGLEGTYPPFSFQGEDGKLTGFEVDFANALAEHM---GIKAKITPT 93 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG----ISS 139 +L+SK+ID+ + R+ + T + G + KKG S Sbjct: 94 KWDGMLASLESKRIDVAINQVTISDERKKKYDFS----TPYTVSGIQVLTKKGNEGNFSK 149 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD-I 198 L G + V G+ E L + K +++ + + +++ R R DA D + Sbjct: 150 PEDLEGKKVGVGLGSNYEQWLRENLKGVDIRTYDDDPTKYQDL----RVGRTDAILVDRL 205 Query: 199 SALYALKLTN 208 +AL +K TN Sbjct: 206 AALDLVKKTN 215 >gi|317060250|ref|ZP_07924735.1| histidine-binding protein [Fusobacterium sp. D12] gi|313685926|gb|EFS22761.1| histidine-binding protein [Fusobacterium sp. D12] Length = 255 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 48/196 (24%), Positives = 72/196 (36%), Gaps = 25/196 (12%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K FV I CL+ G K+ L G N F E + KGFD++ Sbjct: 19 KRIFVVICCLLCF----------ACGKGKEEATLVVGTNPEFAPF-EYMEGEEIKGFDIE 67 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + + I K++ +N ALQSK+ID++ T R+ + Sbjct: 68 LMKQIGEKI---GKKVEIKSMNFDGLLPALQSKKIDVVIAGMTATEERKKHVNFT---KN 121 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y+ Q IM K+ + L G I V G T ++ ++ H ER Sbjct: 122 YYISQQNIMVKENKEHDLEALKGQKIGVVLGYTGDVFISS--------KHEYAVERFNSA 173 Query: 183 DAAYRAHRCDAYTGDI 198 AA A + D + I Sbjct: 174 SAAILALQADKVSAVI 189 >gi|260654266|ref|ZP_05859756.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Jonquetella anthropi E3_33 E1] gi|260630899|gb|EEX49093.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Jonquetella anthropi E3_33 E1] Length = 240 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 38/163 (23%), Positives = 73/163 (44%), Gaps = 11/163 (6%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 LK G + + + +G +GFDV+ A+++ + ++Q+ + AL +K Sbjct: 24 LKVGTESTYPPYEFIGPSGKLEGFDVELAEAVAAKL---GMEVQWQDMAFDALIPALLTK 80 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 +ID+++ T E + +AF I Y + + + G S+ +L G + VQ GT Sbjct: 81 KIDMIAAGMSAT--EERAKRVAFS-IPYEESVSAFITRPDGPKSIEELKGKIVTVQLGTI 137 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + T AD + +K F++ ++ R DA D+ Sbjct: 138 QD-TFADSMEGVTVKK----FQKYDDCVREVVLGRADASLMDV 175 >gi|237798051|ref|ZP_04586512.1| cystine transporter subunit [Pseudomonas syringae pv. oryzae str. 1_6] gi|331020902|gb|EGI00959.1| cystine transporter subunit [Pseudomonas syringae pv. oryzae str. 1_6] Length = 265 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 38/132 (28%), Positives = 56/132 (42%), Gaps = 5/132 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L IK G L G+ F+ V NG GF+V+F AL+ + +KIQ P Sbjct: 33 LQKIKDSGTLNVGLEGTYPPFSFVDENGKLTGFEVEFSEALAKEL-GVKAKIQ--PSKWD 89 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSG 145 AL+SK++D++ + R+ + P T Q ++ K I S L G Sbjct: 90 GILAALESKRLDVVINQVTISDERKKKYDFS-EPYTISGIQALVLKKNADAIKSADDLKG 148 Query: 146 ASICVQAGTTTE 157 + V GT E Sbjct: 149 KKVGVGLGTNYE 160 >gi|229587937|ref|YP_002870056.1| putative ABC transporter exported protein [Pseudomonas fluorescens SBW25] gi|229359803|emb|CAY46653.1| putative ABC transport system, exported protein [Pseudomonas fluorescens SBW25] Length = 267 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 49/218 (22%), Positives = 89/218 (40%), Gaps = 14/218 (6%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 D KRG LK G++ + F G+ GF+VD +A++ ++ K++ + Sbjct: 30 DAVKRGTLKVGMDPTYMPFEMTDKRGEIIGFEVDILKAMAKSM---GVKLELVSTGYDGI 86 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGA 146 A + + D++ + TL +E +L L F GQ ++ K + I S L+ Sbjct: 87 IPAFLTGKFDMIG--SGMTLTQERNLRLNFSEPFIVVGQTLLIRKELEGTIKSYKDLNDE 144 Query: 147 S--ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 + + GTT E+ KYH E+ +D Y + + Sbjct: 145 KYRLTSKLGTTGEMVAKKLI--SKAKYHGYDNEQEGVLDVVNGKADAFVYDAPYNVVAEK 202 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 K+ N + V L + + PLA + +GD + N ++ Sbjct: 203 KVGNGK---LVFLEEPFTFEPLAFGLKKGDYDSINFIN 237 >gi|83647880|ref|YP_436315.1| amino acid ABC transporter periplasmic protein [Hahella chejuensis KCTC 2396] gi|83635923|gb|ABC31890.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Hahella chejuensis KCTC 2396] Length = 258 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 9/133 (6%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 ++ G++ FA A G+ +GFD++ AL + + +K +++ + AL ++ Sbjct: 25 IRIGVDATYPPFASKNAAGELEGFDIEIGNALCAEM---KAKCEWVVQDWDGIIPALLAR 81 Query: 96 QID-ILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI--SSVSQLSGASICVQA 152 + D ILS + RE L F Y G++ K GI S ++QL G S+ VQ Sbjct: 82 KYDAILSSMSITEERREKVL---FSDKYYNTPSGWVAKKGAGIDPSDMNQLKGKSVGVQR 138 Query: 153 GTTTELTLADYFK 165 GT + +++ K Sbjct: 139 GTIQDTYVSEELK 151 >gi|328882495|emb|CCA55734.1| amino acid ABC transporter solute-binding protein [Streptomyces venezuelae ATCC 10712] Length = 350 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 33/143 (23%), Positives = 62/143 (43%), Gaps = 7/143 (4%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLV--GFAEVKANGDWKGFDVDFCRALSSAIFDD 74 T + + + IK+RG L G++ G+ + +GFD+D RA++ I Sbjct: 83 LTPSTADGPSIAAIKQRGKLVVGVDQSSYRWGYRNPETR-SLEGFDIDLARAIAKDILGS 141 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK- 133 + + + +R AL S ++D++ R R +AF + GQ + K Sbjct: 142 EDAVIFRAIPTNQRIAALDSGKVDLVVRTMTINCKRIQQ--VAFSTAYFQAGQQVLAPKL 199 Query: 134 KKGISSV-SQLSGASICVQAGTT 155 + I+ + L+G +C G+T Sbjct: 200 AQDITGYDASLNGKRVCTAEGST 222 >gi|317406066|gb|EFV86330.1| extracellular solute-binding protein family 3 [Achromobacter xylosoxidans C54] Length = 279 Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust. Identities = 46/187 (24%), Positives = 76/187 (40%), Gaps = 18/187 (9%) Query: 27 LGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 L IK+RG + G+ N G+ G + A G++ D R L+ + K + + + Sbjct: 32 LDKIKERGTVTIGVLANGGVFGSID-PATQQLVGWNPDLARELAKGLG---VKAELVQVQ 87 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD-GQGFIMHKKKGISSVSQL 143 R L S ++D+L + + R LG A P +F G K GI+ L Sbjct: 88 TATRTQFLISGKVDLLIASMELNPERAEILGYA--PTPFFRVGGAAATRKDSGIAKWEDL 145 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA--AYRAHRCDAYTGDISAL 201 G +CV G++ + + Y +V D+ A R +C A D + + Sbjct: 146 RGKPVCVSQGSS-------FARPLQADYGAVVKGYKSSSDSLLALRGGQCVAAVHDSTLI 198 Query: 202 YALKLTN 208 + L TN Sbjct: 199 HPLLRTN 205 >gi|224282754|ref|ZP_03646076.1| ABC-type amino acid transport system periplasmic component [Bifidobacterium bifidum NCIMB 41171] Length = 284 Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust. Identities = 30/137 (21%), Positives = 62/137 (45%), Gaps = 4/137 (2%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 + G ++ GI G K +G + GFDVD + ++ + +I + +K+R Sbjct: 40 ESGKIRIGIKFDQPGLG-FKKSGTYVGFDVDVAKYVAKKLGYSEDEIVWKEAPSKQREAM 98 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICV 150 LQ+ +D++ +++ E ++F + GQ ++ K I+ L+G +C Sbjct: 99 LQNGDVDMILAT--YSITDERKNAVSFAGPYFVAGQDLLVRKDDHSINGPEDLNGKRLCS 156 Query: 151 QAGTTTELTLADYFKAH 167 G+T+ T+ F + Sbjct: 157 VTGSTSAATVKKKFASE 173 >gi|332161361|ref|YP_004297938.1| cystine transporter subunit [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325665591|gb|ADZ42235.1| cystine transporter subunit [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 266 Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust. Identities = 47/189 (24%), Positives = 80/189 (42%), Gaps = 16/189 (8%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 +L +K+RG L G+ F+ +G GF+VDF AL+ + K + P Sbjct: 33 LLDQVKERGTLIVGLEGTYPPFSFQGEDGKLTGFEVDFANALAEHM---GVKAKITPTKW 89 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG----ISSVS 141 +L+SK+ID+ + R+ + T + G + KKG S Sbjct: 90 DGMLASLESKRIDVAINQVTISDDRKKKYDFS----TPYTVSGIQVLTKKGNEGKFSKPE 145 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD-ISA 200 L G + V G+ E L + K +++ + + +++ R R DA D ++A Sbjct: 146 DLVGKKVGVGLGSNYEQWLRENLKGVDIRTYDDDPTKYQDL----RVGRTDAILVDRLAA 201 Query: 201 LYALKLTND 209 L +K TND Sbjct: 202 LDLVKKTND 210 >gi|317153668|ref|YP_004121716.1| family 3 extracellular solute-binding protein [Desulfovibrio aespoeensis Aspo-2] gi|316943919|gb|ADU62970.1| extracellular solute-binding protein family 3 [Desulfovibrio aespoeensis Aspo-2] Length = 289 Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust. Identities = 52/222 (23%), Positives = 87/222 (39%), Gaps = 13/222 (5%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 + AS L I +RG L+ G+ G + F G+ GFDVD ++ A+ K++ + Sbjct: 44 SKASALEKIMQRGTLRVGLEAGYMPFEMTDKKGNIVGFDVDMVTEMAKAM---GVKLELV 100 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISS 139 AL S + DI++ T+ +E +L + F GQ +++ I+S Sbjct: 101 NTAWDGIIPALLSDKFDIIASGM--TVNQERNLKINFADPYIIVGQTALINAVDADKITS 158 Query: 140 VSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 L+ G +I + GTT E + K FE E + A D Sbjct: 159 WKDLNAEGITITSKLGTTGEQAVKRLMPKATYKS----FETESEAMLEVLNGKATATVYD 214 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + + L + + PL AI +GD ++ N Sbjct: 215 LPMTSIFYAERGKEGGMKFLSEPFTYEPLGWAINKGDPDFLN 256 >gi|55823258|ref|YP_141699.1| ABC transporter substrate binding protein [Streptococcus thermophilus CNRZ1066] gi|55739243|gb|AAV62884.1| ABC transporter substrate binding protein [Streptococcus thermophilus CNRZ1066] Length = 270 Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust. Identities = 25/103 (24%), Positives = 51/103 (49%), Gaps = 5/103 (4%) Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 +NGD GFDV+ RA+ I K++++ + F LQS ++D ++ + T R+ Sbjct: 61 SNGDLTGFDVEIARAVGKKI---GYKVEFITTSFDGLFGLLQSGKVDAVASSIAITDERQ 117 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 S P F G ++ K +++++++ G ++ G+ Sbjct: 118 KSYDFT-TPYATFQ-YGVVVKKDSSLTNINEIGGHTLAATVGS 158 >gi|310287212|ref|YP_003938470.1| Glutamate-binding protein GluB [Bifidobacterium bifidum S17] gi|311064072|ref|YP_003970797.1| Glutamate-binding protein GluB [Bifidobacterium bifidum PRL2010] gi|309251148|gb|ADO52896.1| Glutamate-binding protein GluB [Bifidobacterium bifidum S17] gi|310866391|gb|ADP35760.1| Glutamate-binding protein GluB [Bifidobacterium bifidum PRL2010] Length = 279 Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust. Identities = 30/137 (21%), Positives = 62/137 (45%), Gaps = 4/137 (2%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 + G ++ GI G K +G + GFDVD + ++ + +I + +K+R Sbjct: 35 ESGKIRIGIKFDQPGLG-FKKSGTYVGFDVDVAKYVAKKLGYSEDEIVWKEAPSKQREAM 93 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICV 150 LQ+ +D++ +++ E ++F + GQ ++ K I+ L+G +C Sbjct: 94 LQNGDVDMILAT--YSITDERKNAVSFAGPYFVAGQDLLVRKDDHSINGPEDLNGKRLCS 151 Query: 151 QAGTTTELTLADYFKAH 167 G+T+ T+ F + Sbjct: 152 VTGSTSAATVKKKFASE 168 >gi|260427211|ref|ZP_05781190.1| amino-acid ABC transporter, periplasmic binding protein [Citreicella sp. SE45] gi|260421703|gb|EEX14954.1| amino-acid ABC transporter, periplasmic binding protein [Citreicella sp. SE45] Length = 287 Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust. Identities = 31/134 (23%), Positives = 62/134 (46%), Gaps = 17/134 (12%) Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F+ + NG+ G+ ++ C+ + +++ D +Q + + A++RF L D+L T Sbjct: 55 FSYLDDNGEPTGYTIELCKRVVASLNVD---LQMIAVTAEDRFDRLARGDCDLLCEATTV 111 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGIS----SVSQLSGASICVQA-------GTT 155 TL R +F T+ G F+ K G + +V L G ++ A G++ Sbjct: 112 TLKRRKQADFSF--YTFLTGAAFLYPKSTGDAGKTVNVGYLKGTTVEAAARAGNIIGGSS 169 Query: 156 TELTLADY-FKAHN 168 + L ++ F++H Sbjct: 170 GQYVLKEFEFESHE 183 >gi|330966438|gb|EGH66698.1| cystine transporter subunit [Pseudomonas syringae pv. actinidiae str. M302091] Length = 268 Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 54/132 (40%), Gaps = 5/132 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L IK G L G+ F+ V NG GF+V+F AL+ + K + P Sbjct: 33 LQKIKDSGTLNVGLEGTYPPFSFVDENGKLTGFEVEFSEALAKEL---GVKAKVQPSKWD 89 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSG 145 AL SK++D++ + R+ + P T Q ++ K I S LSG Sbjct: 90 GILAALDSKRLDVVINQVTISDERKKKYDFS-EPYTISGIQALVLKKNADTIKSAKDLSG 148 Query: 146 ASICVQAGTTTE 157 + V GT E Sbjct: 149 KKVGVGLGTNYE 160 >gi|121607779|ref|YP_995586.1| extracellular solute-binding protein [Verminephrobacter eiseniae EF01-2] gi|121552419|gb|ABM56568.1| extracellular solute-binding protein, family 3 [Verminephrobacter eiseniae EF01-2] Length = 358 Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust. Identities = 45/205 (21%), Positives = 80/205 (39%), Gaps = 17/205 (8%) Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +G+ V+ C + I +K++Y+ + A+ +++ +DI T R+ + Sbjct: 120 RGYHVELCERVLRQIAPA-AKLEYMAVTAQNTLPLVRNGTLDIGCGPTTNNQARQQQV-- 176 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT-------ELTLADYFKAHNM 169 AF TY + GI+SV QL G ++ GTT E TL Sbjct: 177 AFAVTTYVSEVRMAVRADSGIASVDQLGGRTVAASTGTTAVQMLRKLERTLGAPITVLLG 236 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 K H F +E + R DA+ D + L + + P I+ + P+A Sbjct: 237 KDHAESFLLLE-------SGRVDAFVLDDNLLAGMIASAKNPGHFRIVGQALGSEPIALL 289 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEEL 254 + + D + V ++ + EL Sbjct: 290 MRKDDPAFKAAVDGVLIRLMQSGEL 314 >gi|148642867|ref|YP_001273380.1| polar amino acid ABC transporter, substrate-binding component [Methanobrevibacter smithii ATCC 35061] gi|148551884|gb|ABQ87012.1| polar amino acid ABC transporter, substrate-binding component [Methanobrevibacter smithii ATCC 35061] Length = 273 Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 55/130 (42%), Gaps = 6/130 (4%) Query: 123 YFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 YFD + I+ K GI S+S L G ++ Q ++ L KA + +V V + Sbjct: 121 YFDNKQVIVVKNGSGIDSLSDLKGKNVETQKDSSALAALQGDQKALADTFGNLV--EVAD 178 Query: 182 IDAAY---RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + A+ + CDA DI + + D + VIL D IS A G+TE Sbjct: 179 YNTAFMDLESGACDAIAVDIGVAHYQINSKDNDGDFVILNDNISSEQYAIGFKNGNTELR 238 Query: 239 NIVSWTHYAM 248 + V T M Sbjct: 239 DQVQSTLDEM 248 >gi|291616688|ref|YP_003519430.1| GltI [Pantoea ananatis LMG 20103] gi|291151718|gb|ADD76302.1| GltI [Pantoea ananatis LMG 20103] Length = 298 Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust. Identities = 47/225 (20%), Positives = 85/225 (37%), Gaps = 6/225 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 + L I G + G V F+ G+ + A++ AI + P +I+ Sbjct: 26 SGTLKKINDNGVIVIGHRESSVPFSYYDNQQKVVGYSQAYSNAIAEAIKAKLNKPDLQIK 85 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T L R+ AF + G ++ K I Sbjct: 86 MIPITSQNRIPLLQNGTYDYECGSTTNNLERQKQA--AFSDTIFVIGTRLLVKKGSPIKD 143 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L G ++ V +GTT+E+ L M I + + R A+ D + Sbjct: 144 FDDLKGKTVVVTSGTTSEVLLHKLNDEKKMDMRIISAKDHGDSFRTLETGRAVAFMMDDA 203 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 L + +P + VI+ SK + + D ++ +V T Sbjct: 204 LLAGERAKAKKPDDWVIIGTPQSKEAYGCMLRKDDPQFKALVDDT 248 >gi|127514094|ref|YP_001095291.1| extracellular solute-binding protein [Shewanella loihica PV-4] gi|126639389|gb|ABO25032.1| extracellular solute-binding protein, family 3 [Shewanella loihica PV-4] Length = 242 Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust. Identities = 33/137 (24%), Positives = 63/137 (45%), Gaps = 10/137 (7%) Query: 31 KKRGFLKCGINTGLVGFAEVKA-NGDW-KGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 K++ +L G N F V +GD GFD+D R ++ D ++ + Sbjct: 21 KEQDYLVVGTNAAFPPFEYVGGVSGDQVMGFDIDLARKVAE---DAGKTLKVENMKFDSL 77 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGA 146 +AL + +ID+++ T R+ S+ + P Y++ ++ K+ I S++ L+G Sbjct: 78 IVALNAGKIDMIASGMTITPERQASVDFS-EP--YYEATQVVLVNKQDDSIHSLADLTGK 134 Query: 147 SICVQAGTTTELTLADY 163 VQ G+T ++ Y Sbjct: 135 HFAVQLGSTADMMAKKY 151 >gi|271962801|ref|YP_003336997.1| serine/threonine protein kinase-like protein [Streptosporangium roseum DSM 43021] gi|270505976|gb|ACZ84254.1| Serine/threonine protein kinase-like protein [Streptosporangium roseum DSM 43021] Length = 751 Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust. Identities = 32/143 (22%), Positives = 60/143 (41%), Gaps = 5/143 (3%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 ++ +T AS+ K G L G+ L G A + + G W GF+VD ++ A+ S Sbjct: 499 SAPATFASVADKAAKTGRLTVGMRDFLPGVA-LNSGGRWSGFEVDLATEIAKALGVPASG 557 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 + + + +ER L S +D++ +++ + Y ++ I Sbjct: 558 VTFRATSREERPGLLASGDLDLVVSTYSINDKDDVTFAGPY----YLAHVDVLVKDGSPI 613 Query: 138 SSVSQLSGASICVQAGTTTELTL 160 S + L G +C AG+ + L Sbjct: 614 VSAAGLEGKRVCQPAGSGSVRAL 636 >gi|207856322|ref|YP_002242973.1| arginine-binding periplasmic protein 1 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|206708125|emb|CAR32418.1| arginine-binding periplasmic protein 1 precursor [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] Length = 243 Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust. Identities = 48/201 (23%), Positives = 80/201 (39%), Gaps = 30/201 (14%) Query: 47 FAEVKANGDWKGFDVDFCRAL-----SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101 F + AN GFDVD AL +S F + + +P +L+ ++ + + Sbjct: 34 FESMDANNKIVGFDVDLANALCKEIDASCTFTNQAFDGLIP--------SLKFRRFNAVM 85 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 D T RE + L P Y+D + ++ +SV QL G + VQ GTT + + Sbjct: 86 AGMDITPEREKQV-LFTTP--YYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFI- 141 Query: 162 DYFKAHNMKYHP----IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHV 215 M HP + ++ + + R DA GD + + N + P Sbjct: 142 -------MDKHPEITTVPYDSYQNAKLDLQNGRIDAVFGDTAVVTEWLKANPKLAPVGDK 194 Query: 216 ILPDIISKSPLAPAIIQGDTE 236 + + L A+ QG+TE Sbjct: 195 VTDKDYFGTGLGIAVRQGNTE 215 >gi|313139914|ref|ZP_07802107.1| glutamate-binding protein of ABC transporter system [Bifidobacterium bifidum NCIMB 41171] gi|313132424|gb|EFR50041.1| glutamate-binding protein of ABC transporter system [Bifidobacterium bifidum NCIMB 41171] Length = 279 Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust. Identities = 30/137 (21%), Positives = 62/137 (45%), Gaps = 4/137 (2%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 + G ++ GI G K +G + GFDVD + ++ + +I + +K+R Sbjct: 35 ESGKIRIGIKFDQPGLG-FKKSGTYVGFDVDVAKYVAKKLGYSEDEIVWKEAPSKQREAM 93 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICV 150 LQ+ +D++ +++ E ++F + GQ ++ K I+ L+G +C Sbjct: 94 LQNGDVDMILAT--YSITDERKNAVSFAGPYFVAGQDLLVRKDDHSINGPEDLNGKRLCS 151 Query: 151 QAGTTTELTLADYFKAH 167 G+T+ T+ F + Sbjct: 152 VTGSTSAATVKKKFASE 168 >gi|291301451|ref|YP_003512729.1| extracellular solute-binding protein family 3 [Stackebrandtia nassauensis DSM 44728] gi|290570671|gb|ADD43636.1| extracellular solute-binding protein family 3 [Stackebrandtia nassauensis DSM 44728] Length = 323 Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 75/183 (40%), Gaps = 10/183 (5%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD--PSKIQYLPL 83 +L D K G L G+ E K + ++GFD++ + L +F K+++ Sbjct: 72 LLADAVKDGKLVVGVKPDQPLIGEKKGS-TYEGFDIEMAKLLGMRLFGKGGEEKVEFKET 130 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ-GFIMHKKKGISSVSQ 142 + R L S ++D++ + +++ + +F F GQ + + K I ++ Sbjct: 131 TSDNREAFLNSGEVDVVIAS--YSMYPDRVKQFSFAGPYLFTGQNALVSAENKDIKTIDD 188 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+G +C+ G+ + D K N K + A + DA + D + LY Sbjct: 189 LAGKKVCIAKGSGS----IDNLKKENPKAKIETRANYGDCAAQVKDGTFDAVSTDETILY 244 Query: 203 ALK 205 K Sbjct: 245 GYK 247 >gi|206579054|ref|YP_002239696.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Klebsiella pneumoniae 342] gi|288936538|ref|YP_003440597.1| extracellular solute-binding protein family 3 [Klebsiella variicola At-22] gi|206568112|gb|ACI09888.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Klebsiella pneumoniae 342] gi|288891247|gb|ADC59565.1| extracellular solute-binding protein family 3 [Klebsiella variicola At-22] Length = 303 Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust. Identities = 49/233 (21%), Positives = 86/233 (36%), Gaps = 6/233 (2%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQY 80 S L I K G + G V F+ G+ D+ A+ AI + P +++ Sbjct: 32 STLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVDAIKKKLNKPDLQVKL 91 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +P+ ++ R LQ+ D +T L R+ AF + G ++ K I Sbjct: 92 IPVTSQNRIPLLQNGTFDFECGSTTNNLERQKQA--AFSDTIFVVGTRLLVKKGGPIKDF 149 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L ++ V +GTT+E+ L M I + + + R A+ D + Sbjct: 150 PDLKDKAVVVTSGTTSEILLHKLNDEKKMNMRIISAKDHGDSFRTLESGRAVAFMMDDAL 209 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 L + +P I+ SK + + D + +V T T+ E Sbjct: 210 LAGERAKAKKPDNWEIVGTAQSKEAYGCMLRKDDPSFKALVDETVAQAQTSGE 262 >gi|300714866|ref|YP_003739669.1| conserved uncharacterized protein [Erwinia billingiae Eb661] gi|299060702|emb|CAX57809.1| conserved uncharacterized protein [Erwinia billingiae Eb661] Length = 264 Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust. Identities = 36/150 (24%), Positives = 57/150 (38%), Gaps = 23/150 (15%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 I G L+ + F NG GF++D A+ AI K Y+ + Sbjct: 21 IAAEGTLRVAADLAYPPFQYRDVNGKPAGFEIDITNAVCKAI---AVKCDYVVSSFDAEI 77 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH------KKKGIS---SV 140 +L +K++D +S LG + D FI H +KG + + Sbjct: 78 PSLMAKKVDFIS-----------PLGATIKRKKSIDFSDFIYHVPSQLVARKGTNLQPTA 126 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMK 170 L G SI VQ G+ E+ Y+ H ++ Sbjct: 127 ESLQGKSIAVQQGSIQEMYANKYWAPHGVE 156 >gi|308235037|ref|ZP_07665774.1| extracellular solute-binding protein [Gardnerella vaginalis ATCC 14018] gi|311114714|ref|YP_003985935.1| glutamine ABC transporter binding protein [Gardnerella vaginalis ATCC 14019] gi|310946208|gb|ADP38912.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Gardnerella vaginalis ATCC 14019] Length = 290 Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust. Identities = 33/164 (20%), Positives = 75/164 (45%), Gaps = 13/164 (7%) Query: 6 FVSILCLI--ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 +S++C + +L ++ S N+ + ++ GI G K +G + GFDVD Sbjct: 25 ILSMICALCCVLPLSACSKNS-------RNDVIRIGIKFDQPGLG-FKKSGTYVGFDVDV 76 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 + ++ + +I + +K+R LQ+ +D++ T R+ + ++F + Sbjct: 77 AKYVAKKLGYSEDRIVWKESPSKQREAMLQNGDVDMIVATYSITDARKNT--VSFAGPYF 134 Query: 124 FDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 GQ ++ K + +S L G +C G+T+ + + + + + Sbjct: 135 IAGQDLLVRKDEHKVSGPDDLDGKRLCSVTGSTSAIVIKEKYSS 178 >gi|315926090|ref|ZP_07922290.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Pseudoramibacter alactolyticus ATCC 23263] gi|315620534|gb|EFV00515.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Pseudoramibacter alactolyticus ATCC 23263] Length = 273 Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust. Identities = 56/236 (23%), Positives = 90/236 (38%), Gaps = 22/236 (9%) Query: 6 FVSILCLIILFFTSF-STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 + L +I F T S S L D G L+ G N F N GFDVD Sbjct: 10 LAACLVAVIGFATGCGSKQKSALDD----GVLQIGTNAEYTPFEYKDKNNKLVGFDVDLG 65 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 RAL+ + K ++ + F L S Q + + T R+ S ++ + Sbjct: 66 RALAKKM---GVKAKWTNTSFDGIFNGLNSGQYECIIAGVSNTDKRQKSFAMS----DSY 118 Query: 125 DGQGFIMHKKKG---ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 G G ++ G + + QL G + VQ TT + A FK K F+ + + Sbjct: 119 LGNGVVIVSPAGGAQATDIKQLDGKKVGVQLETTADYA-AKAFKKDGNKMTLKEFDSMID 177 Query: 182 IDAAYRAHRCDAYTGD--ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 A R + D D ++ Y + +P+ + + +S P+A + DT Sbjct: 178 AFTALRGGQIDYIMTDEPVANFYVAQ----QPNTYKVSSSTLSNEPVAVVCRKQDT 229 >gi|270283893|ref|ZP_06193740.1| conserved hypothetical protein [Bifidobacterium gallicum DSM 20093] gi|270277646|gb|EFA23500.1| conserved hypothetical protein [Bifidobacterium gallicum DSM 20093] Length = 337 Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust. Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 23/106 (21%) Query: 97 IDILSRNTDWTLLREISLGLAFRPITYFDG--QGFIMHKKKGISSVSQLSGASICVQAGT 154 I+++++N DWT I Y+DG QG + GI+SV+ L+G I G Sbjct: 113 INLIAQNADWTAYA----------IEYYDGDSQGIVAAPDSGITSVADLAGKRI----GI 158 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEID-------AAYRAHRCDA 193 T+ DY + + + ++ VE ++ AA+ + R DA Sbjct: 159 DTKGATGDYVVHAALDHAGLHYDDVETVELSQPDFQAAFTSGRIDA 204 >gi|74311191|ref|YP_309610.1| glutamate and aspartate transporter subunit [Shigella sonnei Ss046] gi|73854668|gb|AAZ87375.1| putative periplasmic binding transport protein [Shigella sonnei Ss046] gi|323163917|gb|EFZ49726.1| glutamate/aspartate periplasmic-binding protein [Shigella sonnei 53G] Length = 302 Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust. Identities = 45/234 (19%), Positives = 89/234 (38%), Gaps = 6/234 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 S L I K G + G V F+ G+ D+ A+ A+ + P +++ Sbjct: 30 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ AF + G + K I Sbjct: 90 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQA--AFSDTIFVVGTRLLTKKGGDIKD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 148 FADLKDKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHSDSFRTLESGRAVAFMMDDA 207 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 L + +P I+ S+ + + D ++ ++ T + T+ E Sbjct: 208 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTTAQVQTSGE 261 >gi|304393288|ref|ZP_07375216.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Ahrensia sp. R2A130] gi|303294295|gb|EFL88667.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Ahrensia sp. R2A130] Length = 255 Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust. Identities = 39/150 (26%), Positives = 63/150 (42%), Gaps = 9/150 (6%) Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 A G+WKGF+++ AL A+ ++ ++P+ AL S +ID + + T R Sbjct: 42 AGGEWKGFEIEVGEALCKAMNEE---CVWVPIAWDGIIPALTSNKIDAIVASMSITEERM 98 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 ++ F Y I K I S+ L G ++ VQ TT A++ +A Sbjct: 99 KTID--FSNKYYNTPAALIAPKASEIKSLDDLKGKTVGVQVSTTH----ANFAEAKIPGA 152 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 ++ E + A R DA D AL Sbjct: 153 TVKTYQDFNEHNQDLFAGRVDAIVADSLAL 182 >gi|239982702|ref|ZP_04705226.1| glutamate binding protein [Streptomyces albus J1074] gi|291454550|ref|ZP_06593940.1| glutamate binding protein [Streptomyces albus J1074] gi|291357499|gb|EFE84401.1| glutamate binding protein [Streptomyces albus J1074] Length = 277 Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust. Identities = 37/167 (22%), Positives = 69/167 (41%), Gaps = 7/167 (4%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 +K GI G + G + GFDVD ++ + +I++ + +R AL Sbjct: 39 IKVGIKFDQPGIGQKTPQGTFTGFDVDVATYVAKELGYTEKQIEFKETPSADRENALSRG 98 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 ++ ++ + RE + A + Q ++ IS +L G ++C AG+T Sbjct: 99 DVEFIAASYSINDEREAKVDFAGPYLLAH--QDLLIRADDKISKAEELDGKTLCSVAGST 156 Query: 156 TELTLADYF-KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 + + + F K +K + E +E + + DA T D S L Sbjct: 157 SAQNVKEKFAKGAQLKEYGTYSECLEGL----QTGAVDALTTDDSIL 199 >gi|331014465|gb|EGH94521.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 266 Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust. Identities = 44/187 (23%), Positives = 76/187 (40%), Gaps = 18/187 (9%) Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +G +V+ + + + + L N R LQ ++D+L N +WT R LG Sbjct: 51 QGVNVELAEDIGKRLGVEVELVSVLTAN---RVQFLQQGKVDLLIANMEWTPERGQLLGS 107 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 P G ++ K I+ L G +C G++ L ++ ++K F Sbjct: 108 VPTPFYRVGGTAAVL-KDSAITRWEDLKGQPVCTSQGSSYIKALTEF--GADIK----AF 160 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAII---Q 232 + E A R + C A D + + L ND I P++ +P AP++I Sbjct: 161 KSSSESLLALRGNNCVAAVHDATLINPLLAGNDEWKGYRAIAPEL---NP-APSVIWTRS 216 Query: 233 GDTEWYN 239 G+T+ N Sbjct: 217 GETDTQN 223 >gi|289811796|ref|ZP_06542425.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 225 Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust. Identities = 34/150 (22%), Positives = 59/150 (39%), Gaps = 6/150 (4%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 S L I K G + G V F+ G+ D+ A+ + + P +++ Sbjct: 42 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEVVKKKLNKPDLQVK 101 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T L R+ AF + G + K I Sbjct: 102 LIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQA--AFSDTIFVVGTRLLTKKGGDIKD 159 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNM 169 L G ++ V +GTT+E+ L + M Sbjct: 160 FPDLKGKAVVVTSGTTSEILLHKLNEEQKM 189 >gi|254166534|ref|ZP_04873388.1| Bacterial extracellular solute-binding protein, family 3 [Aciduliprofundum boonei T469] gi|289596080|ref|YP_003482776.1| putative PAS/PAC sensor protein [Aciduliprofundum boonei T469] gi|197624144|gb|EDY36705.1| Bacterial extracellular solute-binding protein, family 3 [Aciduliprofundum boonei T469] gi|289533867|gb|ADD08214.1| putative PAS/PAC sensor protein [Aciduliprofundum boonei T469] Length = 456 Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust. Identities = 34/150 (22%), Positives = 67/150 (44%), Gaps = 25/150 (16%) Query: 33 RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL---SSAIFDDPSKIQYLPLNAKERF 89 +G +K I+ L ++ + NG+ GF+++ +A+ ++ FD ++P N + Sbjct: 34 KGIVKIAIDKNLPPYSYIDQNGNLVGFNIELLKAMEEYTNFTFD------FVPGNWDQCM 87 Query: 90 LALQSKQIDIL-------SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 LQ+ ++D L RN + E + L YFD + K I+ +S+ Sbjct: 88 FRLQNGEVDALMATVPTPQRNKSFAFT-ETYMHL------YFD--FYQRASLKSINKISE 138 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYH 172 + +I V G TE+ L ++ + K + Sbjct: 139 IGNHTIAVVRGDVTEIFLKNWMNETHEKVY 168 >gi|28869816|ref|NP_792435.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato str. DC3000] gi|28853061|gb|AAO56130.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 280 Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust. Identities = 44/187 (23%), Positives = 76/187 (40%), Gaps = 18/187 (9%) Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +G +V+ + + + + L N R LQ ++D+L N +WT R LG Sbjct: 65 QGVNVELAEDIGKRLGVEVELVSVLTAN---RVQFLQQGKVDLLIANMEWTPERGQLLGS 121 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 P G ++ K I+ L G +C G++ L ++ ++K F Sbjct: 122 VPTPFYRVGGTAAVL-KDSAITRWEDLKGQPVCTSQGSSYIKALTEF--GADIK----AF 174 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAII---Q 232 + E A R + C A D + + L ND I P++ +P AP++I Sbjct: 175 KSSSESLLALRGNNCVAAVHDATLINPLLAGNDEWKGYRAIAPEL---NP-APSVIWTRS 230 Query: 233 GDTEWYN 239 G+T+ N Sbjct: 231 GETDTQN 237 >gi|238758025|ref|ZP_04619206.1| Glutamate/aspartate periplasmic-binding protein [Yersinia aldovae ATCC 35236] gi|238703779|gb|EEP96315.1| Glutamate/aspartate periplasmic-binding protein [Yersinia aldovae ATCC 35236] Length = 309 Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust. Identities = 48/253 (18%), Positives = 100/253 (39%), Gaps = 9/253 (3%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KI 78 ++ L IK G + G V F+ G+ D+ + A+ + P ++ Sbjct: 36 SSDTLKKIKDSGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNVIVEAVKKKLNAPDLQV 95 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + +P+ ++ R LQ+ D +T L R+ AF + G + K + Sbjct: 96 KLIPITSQNRIPLLQNGTFDFECGSTTNNLERQQQA--AFSNTIFVVGTRLLTKKGTEVK 153 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 L+G ++ V +GTT+E+ L + M I + + + R A+ D Sbjct: 154 DFKDLAGKAVVVTSGTTSEVLLNKLNEKDKMDMRIISAKDHGDSFRTLESGRAVAFMMDD 213 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 + L + +P + I+ S+ + + D + ++ T + TA+ G+ + Sbjct: 214 ALLAGERAKAKKPDQWDIVGTAQSQEAYGCMLRKNDPAFKTLMDET---IATAQTSGVAE 270 Query: 259 KNINQVSKDTTNP 271 K+ ++ K+ P Sbjct: 271 KSFDRWFKNPIPP 283 >gi|66043627|ref|YP_233468.1| cystine transporter subunit [Pseudomonas syringae pv. syringae B728a] gi|63254334|gb|AAY35430.1| extracellular solute-binding protein, family 3 [Pseudomonas syringae pv. syringae B728a] Length = 265 Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust. Identities = 39/132 (29%), Positives = 57/132 (43%), Gaps = 5/132 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L IK G L G+ F+ V +G GF+V+F AL+ + +KIQ P Sbjct: 33 LQKIKDSGTLNVGLEGTYPPFSFVDESGKLTGFEVEFSEALAKEL-GVKAKIQ--PSKWD 89 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSG 145 AL SK++D++ + R+ + P T Q ++ K I SV LSG Sbjct: 90 GILAALDSKRLDVVINQVTISDERKKKYDFS-EPYTISGIQALVLKKNADTIKSVKDLSG 148 Query: 146 ASICVQAGTTTE 157 + V GT E Sbjct: 149 KKVGVGLGTNYE 160 >gi|126444587|ref|YP_001064263.1| glutamine ABC transporter periplasmic protein [Burkholderia pseudomallei 668] gi|126224078|gb|ABN87583.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia pseudomallei 668] Length = 250 Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust. Identities = 53/199 (26%), Positives = 79/199 (39%), Gaps = 26/199 (13%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + F +I+ L ++ AS+ G K L G +T + F E K + GFD+D Sbjct: 4 RSFIKTIVALALV-------GASVAGAHAKE--LVVGTDTSFMPF-EFKQGDKYVGFDLD 53 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 ++ KIQ P++ ALQ++ ID+ + T+ E + F Sbjct: 54 LWAEIAKGA-GWTYKIQ--PMDFAGLIPALQTQNIDVAL--SGMTIKEERRKAIDFSDPY 108 Query: 123 YFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y G + I S+ L+G I + GT T D+ KAH P + Sbjct: 109 YDSGLAAMVQANNTTIKSIDDLNGKVIAAKTGTAT----IDWIKAH---LKPKEIRQFPN 161 Query: 182 IDAAY---RAHRCDAYTGD 197 ID AY A R DA D Sbjct: 162 IDQAYLALEAGRVDAAMHD 180 >gi|237507558|ref|ZP_04520273.1| glutamine ABC transporter periplasmic protein [Burkholderia pseudomallei MSHR346] gi|234999763|gb|EEP49187.1| glutamine ABC transporter periplasmic protein [Burkholderia pseudomallei MSHR346] Length = 250 Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust. Identities = 46/166 (27%), Positives = 67/166 (40%), Gaps = 17/166 (10%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 L G +T + F E K + GFD+D A++ K+Q P++ ALQ++ Sbjct: 28 LVVGTDTSFMPF-EFKQGDKYVGFDLDLWAAIAKGA-GWTYKVQ--PMDFAGLIPALQTQ 83 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDG-QGFIMHKKKGISSVSQLSGASICVQAGT 154 ID+ + T+ E + F Y G + I S+ L+G I + GT Sbjct: 84 NIDVAL--SGMTIKEERRKAIDFSDPYYDSGLAAMVQANNTTIKSIDDLNGKVIAAKTGT 141 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAY---RAHRCDAYTGD 197 T D+ KAH P + ID AY A R DA D Sbjct: 142 AT----IDWIKAH---LKPKEIRQFPNIDQAYLALEAGRVDAAMHD 180 >gi|27364435|ref|NP_759963.1| amino acid ABC transporter periplasmic amino acid-binding portion [Vibrio vulnificus CMCP6] gi|320157818|ref|YP_004190197.1| amino acid ABC transporterperiplasmic amino acid-binding portion [Vibrio vulnificus MO6-24/O] gi|27360554|gb|AAO09490.1| Amino acid ABC transporter, periplasmic amino acid-binding portion [Vibrio vulnificus CMCP6] gi|319933130|gb|ADV87994.1| amino acid ABC transporter, periplasmic amino acid-binding portion [Vibrio vulnificus MO6-24/O] Length = 250 Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust. Identities = 46/173 (26%), Positives = 75/173 (43%), Gaps = 10/173 (5%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 +K G++ F VK + +GF+VD + + K++Y+ N F L++ Sbjct: 27 VKVGMSGRYFPFTFVKQD-QLQGFEVDMWDEIGKR---NGYKVEYVTANFSGLFGLLETG 82 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 +ID +S T R+ A P Q + I V+ L+G ++ V G+ Sbjct: 83 RIDTISNQITMTDARKAKYLFA-DPYVVDGAQITVRKGNDSIKGVADLAGKTVAVNLGSN 141 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD-ISALYALKLT 207 E L DY K + K + ++ E D A R DA+ D +SAL +K T Sbjct: 142 FEQLLRDYDK--DGKINIKTYDTGIEHDVAL--GRADAFVMDRLSALELIKKT 190 >gi|1709588|sp|P52626|PATH_VIBHA RecName: Full=Putative amino-acid ABC transporter-binding protein patH; Flags: Precursor gi|1006568|gb|AAA78256.1| binding protein precursor [Vibrio harveyi] Length = 248 Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 74/173 (42%), Gaps = 10/173 (5%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 +K G++ F VK + +GF+VD + + KI+Y+ N F L++ Sbjct: 25 VKVGMSGRYFPFTFVKQD-KLQGFEVDMWDEIGKR---NDYKIEYVTANFSGLFGLLETG 80 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 +ID +S T R+ A P Q + I V L+G ++ V G+ Sbjct: 81 RIDTISNQITMTDARKAKYLFA-DPYVVDGAQITVRKGNDSIQGVEDLAGKTVAVNLGSN 139 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD-ISALYALKLT 207 E L DY K + K + ++ E D A R DA+ D +SAL +K T Sbjct: 140 FEQLLRDYDK--DGKINIKTYDTGIEHDVAL--GRADAFIMDRLSALELIKKT 188 >gi|222445100|ref|ZP_03607615.1| hypothetical protein METSMIALI_00719 [Methanobrevibacter smithii DSM 2375] gi|261350332|ref|ZP_05975749.1| bacterial extracellular solute-binding protein, family 3 [Methanobrevibacter smithii DSM 2374] gi|222434665|gb|EEE41830.1| hypothetical protein METSMIALI_00719 [Methanobrevibacter smithii DSM 2375] gi|288861116|gb|EFC93414.1| bacterial extracellular solute-binding protein, family 3 [Methanobrevibacter smithii DSM 2374] Length = 273 Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 55/130 (42%), Gaps = 6/130 (4%) Query: 123 YFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 YFD + I+ K GI S+S L G ++ Q ++ L KA + +V V + Sbjct: 121 YFDNKQVIVVKNGSGIDSLSDLKGKNVETQKDSSALAALQGDQKALADTFGNLV--EVAD 178 Query: 182 IDAAY---RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + A+ + CDA DI + + D + VIL D IS A G+TE Sbjct: 179 YNTAFMDLESGACDAIAVDIGVAHYQINSKDNGGDFVILNDNISSEQYAIGFKNGNTELR 238 Query: 239 NIVSWTHYAM 248 + V T M Sbjct: 239 DQVQSTLDEM 248 >gi|307319173|ref|ZP_07598603.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti AK83] gi|306895280|gb|EFN26036.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti AK83] Length = 266 Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust. Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 4/95 (4%) Query: 7 VSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 +S+LC L S A + IK G +K G+ F + AN G+D D + Sbjct: 9 ISVLCAAALVAGLVSPVAAQTVEVIKSAGTVKVGMLVDFPPFGIMDANNQPDGYDADVAK 68 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 L+ + ++ +P+ R LQS Q+D+L Sbjct: 69 LLAKELG---VEVTIVPVTGPNRIPYLQSNQVDLL 100 >gi|290510406|ref|ZP_06549776.1| glutamate and aspartate transporter subunit [Klebsiella sp. 1_1_55] gi|289777122|gb|EFD85120.1| glutamate and aspartate transporter subunit [Klebsiella sp. 1_1_55] Length = 318 Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust. Identities = 34/140 (24%), Positives = 58/140 (41%), Gaps = 6/140 (4%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQY 80 S L I K G + G V F+ G+ D+ A+ AI + P +++ Sbjct: 47 STLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVDAIKKKLNKPDLQVKL 106 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +P+ ++ R LQ+ D +T L R+ AF + G ++ K I Sbjct: 107 IPVTSQNRIPLLQNGTFDFECGSTTNNLERQKQA--AFSDTIFVVGTRLLVKKGGPIKDF 164 Query: 141 SQLSGASICVQAGTTTELTL 160 L ++ V +GTT+E+ L Sbjct: 165 PDLKDKAVVVTSGTTSEILL 184 >gi|310827749|ref|YP_003960106.1| hypothetical protein ELI_2160 [Eubacterium limosum KIST612] gi|308739483|gb|ADO37143.1| hypothetical protein ELI_2160 [Eubacterium limosum KIST612] Length = 273 Score = 37.4 bits (85), Expect = 3.8, Method: Compositional matrix adjust. Identities = 51/243 (20%), Positives = 93/243 (38%), Gaps = 17/243 (6%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 VS+ +++ T D G LK G N V F N + GFD+D A Sbjct: 10 VSVALMLVASLTLAGCGGKTAEDPLADGVLKIGTNATYVPFEYRDENNEMVGFDIDMGNA 69 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 ++ + K +++ F L S Q +++ T T R+ + ++ P T Sbjct: 70 IAEEL---GVKAEWVDTGFDGIFNGLTSNQYEMIIAGTSITEERQKTFNMS-SPYT---A 122 Query: 127 QGF-IMHKKKGI--SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 G I+ + G + L G + VQ TT++ A+ + + F+ + + Sbjct: 123 NGIVIVSRNDGTPAKTADDLKGKKVGVQIETTSDYA-AEKMIENGTDMNLSKFDAMLDAF 181 Query: 184 AAYRAHRCDAYTGD--ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A D D + Y T+ +P + I + +S P+ + + DTE+ + Sbjct: 182 TALEGKTIDYILTDKPVGQFY----TSKKPDVYSITSETLSNEPIGITMRKNDTEFSQKI 237 Query: 242 SWT 244 T Sbjct: 238 EET 240 >gi|323525258|ref|YP_004227411.1| family 3 extracellular solute-binding protein [Burkholderia sp. CCGE1001] gi|323382260|gb|ADX54351.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1001] Length = 314 Score = 37.4 bits (85), Expect = 3.8, Method: Compositional matrix adjust. Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 6/135 (4%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD---PS-KIQYLPLNA 85 + K + G V F+ AN G+ +D + I + P K++ +P+ + Sbjct: 48 VSKERVITIGYRDASVPFSYYDANQHPVGYSIDIANLIVERIKTEIKLPDLKVRTIPITS 107 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 + R LQ+ ID T T E + ++F + G ++ K GI + L Sbjct: 108 QNRISLLQNGTIDF--ECTSTTNNAERAQQVSFSNTFFVIGTRLLVRTKSGIKDFADLKD 165 Query: 146 ASICVQAGTTTELTL 160 ++ V AGTT+E L Sbjct: 166 KTVVVGAGTTSEKIL 180 >gi|28378894|ref|NP_785786.1| glutamine ABC transporter, substrate binding protein [Lactobacillus plantarum WCFS1] gi|300769713|ref|ZP_07079596.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308181095|ref|YP_003925223.1| glutamine ABC transporter, substrate binding protein [Lactobacillus plantarum subsp. plantarum ST-III] gi|28271731|emb|CAD64637.1| glutamine ABC transporter, substrate binding protein [Lactobacillus plantarum WCFS1] gi|300492756|gb|EFK27941.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308046586|gb|ADN99129.1| glutamine ABC transporter, substrate binding protein [Lactobacillus plantarum subsp. plantarum ST-III] Length = 279 Score = 37.4 bits (85), Expect = 3.8, Method: Compositional matrix adjust. Identities = 40/169 (23%), Positives = 70/169 (41%), Gaps = 21/169 (12%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGD--------------IKKRGFLKCGINTGLVG 46 M K F L LI++ +T S G IKKRG++ G++ V Sbjct: 1 MKKRLFA--LSLIVVMLLGMATTLSGCGQNVTKRADTQDTWSKIKKRGYVVVGLDDSFVP 58 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 + +G G+D+D RA+ KI + ++ L++ ID++ Sbjct: 59 MGFREKSGKLVGYDIDLARAVFKLY---GIKISFQTIDWSMNATELRNGTIDLIWNGYTK 115 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 RE +AF + Q + KK I+S ++G ++ VQ+G++ Sbjct: 116 NPQREKV--VAFSNTYLKNKQVLVSLKKNHINSFDDMTGKTLGVQSGSS 162 >gi|327393114|dbj|BAK10536.1| glutamate/aspartate periplasmic- binding protein precursor GltI [Pantoea ananatis AJ13355] Length = 298 Score = 37.0 bits (84), Expect = 3.8, Method: Compositional matrix adjust. Identities = 47/225 (20%), Positives = 85/225 (37%), Gaps = 6/225 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 + L I G + G V F+ G+ + A++ AI + P +I+ Sbjct: 26 SGTLKKINDNGVIVIGHRESSVPFSYYDNQQKVVGYSQAYSNAIAEAIKAKLNKPDLQIK 85 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T L R+ AF + G ++ K I Sbjct: 86 MIPITSQNRIPLLQNGTYDYECGSTTNNLERQKQA--AFSDTIFVIGTRLLVKKGSPIKD 143 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L G ++ V +GTT+E+ L M I + + R A+ D + Sbjct: 144 FDDLKGKTVVVTSGTTSEVLLHKLNDEKKMDMRIISAKDHGDSFRTLETGRAVAFMMDDA 203 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 L + +P + VI+ SK + + D ++ +V T Sbjct: 204 LLAGERAKAKKPDDWVIIGTPQSKEAYGCMLRKDDPQFKALVDDT 248 >gi|308071441|ref|YP_003873046.1| Probable amino-acid ABC transporter binding protein yxeM precursor [Paenibacillus polymyxa E681] gi|305860720|gb|ADM72508.1| Probable amino-acid ABC transporter binding protein yxeM precursor [Paenibacillus polymyxa E681] Length = 269 Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust. Identities = 37/165 (22%), Positives = 62/165 (37%), Gaps = 6/165 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V+ + L ++ T + S + G FA + G+D Sbjct: 1 MKKSALVAAIGLSLVLLTGALSGCSSKDAASGDKVIYVGTQNDYPPFAFTNDKNELTGYD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ + + + D KI+++P FLAL S ++ +++ RE F Sbjct: 61 VEVVKEIDKKL--DGYKIEFVPSGWDAIFLALDSNKVQMIADEVAKNPEREKK--YLFSD 116 Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADY 163 +YF Q I+ KK I S+ L G + G + L Y Sbjct: 117 ESYFSAQSVIIVKKGRTDIHSLKDLEGKKVAASVGDSYTQLLEQY 161 >gi|307129534|ref|YP_003881550.1| histidine-binding periplasmic protein [Dickeya dadantii 3937] gi|306527063|gb|ADM96993.1| Histidine-binding periplasmic protein precursor [Dickeya dadantii 3937] Length = 279 Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust. Identities = 36/152 (23%), Positives = 67/152 (44%), Gaps = 14/152 (9%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 +S+L +I++F S A K+ ++ G++ F E G+ GFD+D A Sbjct: 24 LSLLKIIVIFTISPIVFA-------KQDVIRIGVDLTFPPFQERDKYGNPSGFDIDITDA 76 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 + ++ +K Y+ + AL +K+ID++S + ++ + F + Sbjct: 77 ICKSV---NAKCDYIVNTFDAQIPALLAKKIDVIS---PLGVTKKRKESIDFSDYLFHIP 130 Query: 127 QGFIMHKKKG-ISSVSQLSGASICVQAGTTTE 157 F+ K+ + V L G +I VQ GT E Sbjct: 131 TRFVARKETNLLPQVDILRGKNIAVQQGTIQE 162 >gi|225620812|ref|YP_002722070.1| amino acid-binding protein [Brachyspira hyodysenteriae WA1] gi|225215632|gb|ACN84366.1| amino acid-binding protein [Brachyspira hyodysenteriae WA1] Length = 254 Score = 37.0 bits (84), Expect = 4.0, Method: Compositional matrix adjust. Identities = 36/142 (25%), Positives = 59/142 (41%), Gaps = 7/142 (4%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 S N I +I ++ GI F + +NG+ GFD D +S S I + Sbjct: 22 SENTPIKNEISTNQYVNVGIYVYDYPFGYL-SNGNIGGFDYDLMNEISKI---SGSNINF 77 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISS 139 +P+ +E AL+SK+ID + T+ E L F Y Q ++ + I + Sbjct: 78 IPMRFEELMPALESKKIDAII--AGMTVTDERKQYLNFSDKYYTSSQAVLVKTDNESIQT 135 Query: 140 VSQLSGASICVQAGTTTELTLA 161 L G + V GT + ++ Sbjct: 136 EEDLIGKKVGVIKGTVADTMIS 157 >gi|167567071|ref|ZP_02359987.1| glutamine ABC transporter periplasmic protein [Burkholderia oklahomensis EO147] gi|167574148|ref|ZP_02367022.1| glutamine ABC transporter periplasmic protein [Burkholderia oklahomensis C6786] Length = 250 Score = 37.0 bits (84), Expect = 4.0, Method: Compositional matrix adjust. Identities = 49/169 (28%), Positives = 68/169 (40%), Gaps = 23/169 (13%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS---KIQYLPLNAKERFLAL 92 L G +T + F E K + GFD+D L + I D KIQ P++ AL Sbjct: 28 LVVGTDTSFMPF-EFKQGDKYVGFDLD----LWAEIAKDAGWTYKIQ--PMDFAGLIPAL 80 Query: 93 QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQ 151 Q++ ID+ T+ E + F Y G ++ I S+ L+G I + Sbjct: 81 QTQNIDVALSGM--TIKEERKKAIDFSDPYYDSGLAAMVQTNNATIKSIDDLNGKVIAAK 138 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY---RAHRCDAYTGD 197 GT T D+ KAH P + ID AY A R DA D Sbjct: 139 TGTAT----IDWIKAH---LKPKEIRQFPNIDQAYLALEAGRVDAAMHD 180 >gi|329935647|ref|ZP_08285454.1| bifunctional protein [Streptomyces griseoaurantiacus M045] gi|329304908|gb|EGG48779.1| bifunctional protein [Streptomyces griseoaurantiacus M045] Length = 665 Score = 37.0 bits (84), Expect = 4.0, Method: Compositional matrix adjust. Identities = 24/102 (23%), Positives = 43/102 (42%) Query: 33 RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92 R L G G + G W GFD+D AL+ + D ++ + + R L Sbjct: 414 RKRLTIGAKEDQPGLSLHDRKGVWSGFDIDIAYALARELGYDEKQVDFYGVTTANRASKL 473 Query: 93 QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 ++ ++D++ + T RE G+ F Y G ++ +K Sbjct: 474 RNGEVDLVVASYSMTPEREKRDGIRFVGPYYKAGTSLLVRRK 515 >gi|206576658|ref|YP_002237705.1| cystine ABC transporter, periplasmic cystine-binding protein [Klebsiella pneumoniae 342] gi|288934565|ref|YP_003438624.1| extracellular solute-binding protein family 3 [Klebsiella variicola At-22] gi|290508765|ref|ZP_06548136.1| cystine transport system substrate-binding protein [Klebsiella sp. 1_1_55] gi|206565716|gb|ACI07492.1| cystine ABC transporter, periplasmic cystine-binding protein [Klebsiella pneumoniae 342] gi|288889274|gb|ADC57592.1| extracellular solute-binding protein family 3 [Klebsiella variicola At-22] gi|289778159|gb|EFD86156.1| cystine transport system substrate-binding protein [Klebsiella sp. 1_1_55] Length = 266 Score = 37.0 bits (84), Expect = 4.0, Method: Compositional matrix adjust. Identities = 46/208 (22%), Positives = 89/208 (42%), Gaps = 12/208 (5%) Query: 6 FVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 + + ++++ S T A+ +L +K+RG L+ G+ F+ +G GF+V+F Sbjct: 11 LMGAMAVVLMAGVSVKTFAAENLLNQVKERGTLRVGLEGTYPPFSFQGDDGKLTGFEVEF 70 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 L+ + K P +L SK+ID++ + R+ + P T Sbjct: 71 ANELAKHL---GVKADLKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDFS-TPYTI 126 Query: 124 FDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Q + +G I + + L G + V GT E L + +++ + + +++ Sbjct: 127 SGVQALVKKGNEGAIKTAADLKGKKVGVGLGTNYEEWLRQNVQGVDVRTYDDDPTKYQDL 186 Query: 183 DAAYRAHRCDAYTGD-ISALYALKLTND 209 R R DA D ++AL +K TN+ Sbjct: 187 ----RVGRIDAILVDRLAALDLVKKTNN 210 >gi|241765820|ref|ZP_04763759.1| extracellular solute-binding protein family 3 [Acidovorax delafieldii 2AN] gi|241364268|gb|EER59430.1| extracellular solute-binding protein family 3 [Acidovorax delafieldii 2AN] Length = 253 Score = 37.0 bits (84), Expect = 4.0, Method: Compositional matrix adjust. Identities = 49/217 (22%), Positives = 85/217 (39%), Gaps = 17/217 (7%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 FS A L DIKK G + F K GF+V+ ++ + KI+ Sbjct: 17 FSVQARSLDDIKKGGKIIVATEGQFAPFNYFKGT-TLTGFEVEVAELVAKKM---GLKIE 72 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 + + L+ + D++ + T E + + F Y G G ++ I S Sbjct: 73 WKTIGFDALLTGLKQDRWDLVIASHGVT--EERAKAVTFTEPHYCSG-GMVISMDPAIRS 129 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA--AYRAHRCDAYTGD 197 L+G + VQ GT+ + MK P ++DA A +HR DA+ D Sbjct: 130 AKDLAGKIVAVQTGTSYLENVQKVTTIKEMKNFPT------DVDARSALTSHRVDAWVTD 183 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 A ++ P + L +++ +A A+ +G+ Sbjct: 184 --RFVAKEVVAKNPKAGLKLGEMVFIERIASAVAKGN 218 >gi|197334500|ref|YP_002156404.1| lysine-arginine-ornithine-binding periplasmic protein [Vibrio fischeri MJ11] gi|197315990|gb|ACH65437.1| lysine-arginine-ornithine-binding periplasmic protein [Vibrio fischeri MJ11] Length = 258 Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust. Identities = 44/175 (25%), Positives = 74/175 (42%), Gaps = 25/175 (14%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 ++ GI F+ + +G+ KGFDVD AL + ++ + + + +L ++ Sbjct: 27 IRFGIEGAYPPFSWTEPSGELKGFDVDIANALCKEM---EARCKIVAQDWDGIIPSLLAR 83 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK---KKG---ISSVSQLSGASIC 149 + D + T R+ + I + + I +K KKG + + L G ++ Sbjct: 84 KYDAIIAAMSITEERK-------KKIDFTEKYALIPNKFVAKKGTDLVMTKEGLKGVTVG 136 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY---RAHRCDAYTGDISAL 201 VQ TT + L D F +V +R D AY +A R D GD SAL Sbjct: 137 VQRATTHDKYLTDNFG------KGVVLKRYGSFDEAYLDLKAGRIDTVLGDASAL 185 >gi|123442746|ref|YP_001006723.1| cystine transporter subunit [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122089707|emb|CAL12559.1| putative cystine-binding periplasmic protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 266 Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust. Identities = 47/189 (24%), Positives = 80/189 (42%), Gaps = 16/189 (8%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 +L +K+RG L G+ F+ +G GF+VDF AL+ + K + P Sbjct: 33 LLDQVKERGTLIVGLEGTYPPFSFQGEDGKLTGFEVDFANALAEHM---GVKAKITPTKW 89 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG----ISSVS 141 +L+SK+ID+ + R+ + T + G + KKG S Sbjct: 90 DGMLASLESKRIDVAINQVTISDERKKKYDFS----TPYTVSGIQVLTKKGNEGKFSKPE 145 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD-ISA 200 L G + V G+ E L + K +++ + + +++ R R DA D ++A Sbjct: 146 DLVGKKVGVGLGSNYEQWLRENLKDVDIRTYDDDPTKYQDL----RVGRTDAILVDRLAA 201 Query: 201 LYALKLTND 209 L +K TND Sbjct: 202 LDLVKKTND 210 >gi|302390116|ref|YP_003825937.1| extracellular solute-binding protein family 3 [Thermosediminibacter oceani DSM 16646] gi|302200744|gb|ADL08314.1| extracellular solute-binding protein family 3 [Thermosediminibacter oceani DSM 16646] Length = 278 Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust. Identities = 37/136 (27%), Positives = 60/136 (44%), Gaps = 18/136 (13%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANG---DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 IKK G L G + F + G + GFD+D +A++ + L ++ + Sbjct: 48 IKKAGKLVIGTSADYPPFEFHQVTGGKDEIVGFDIDIAKAIA----------KELGVDLE 97 Query: 87 ERFLALQSKQIDILSRNTD-----WTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 + +A +S +LS+ D +T+ E + F GQ I +K G+ S Sbjct: 98 IKDMAFESIIPAVLSKTVDLGIAGFTITEERLKSVNFSDPYIDGGQQIITYKGSGVKSKE 157 Query: 142 QLSGASICVQAGTTTE 157 L+G +I VQ GTT E Sbjct: 158 DLNGKTIGVQLGTTGE 173 >gi|254557099|ref|YP_003063516.1| glutamine ABC transporter, substrate binding protein [Lactobacillus plantarum JDM1] gi|254046026|gb|ACT62819.1| glutamine ABC transporter, substrate binding protein [Lactobacillus plantarum JDM1] Length = 279 Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust. Identities = 40/169 (23%), Positives = 70/169 (41%), Gaps = 21/169 (12%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGD--------------IKKRGFLKCGINTGLVG 46 M K F L LI++ +T S G IKKRG++ G++ V Sbjct: 1 MKKRLFA--LSLIVVMLLGMATTLSGCGQNVTKRADTQDTWSKIKKRGYVVVGLDDSFVP 58 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 + +G G+D+D RA+ KI + ++ L++ ID++ Sbjct: 59 MGFREKSGKLVGYDIDLARAVFKLY---GIKISFQTIDWSMNATELRNGTIDLIWNGYTK 115 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 RE +AF + Q + KK I+S ++G ++ VQ+G++ Sbjct: 116 NPQREKV--VAFSNTYLKNKQVLVSLKKNHINSFDDMTGKTLGVQSGSS 162 >gi|260461007|ref|ZP_05809256.1| extracellular solute-binding protein family 3 [Mesorhizobium opportunistum WSM2075] gi|259033041|gb|EEW34303.1| extracellular solute-binding protein family 3 [Mesorhizobium opportunistum WSM2075] Length = 269 Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust. Identities = 46/195 (23%), Positives = 78/195 (40%), Gaps = 11/195 (5%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 +A + DI RG L I+T + + AN GFD++ + A+ ++++ Sbjct: 28 SAQSVEDIISRGKLVVAIDTTTPPYGFLDANLKPTGFDIEVANKMGEAL---GVPVEFVT 84 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG--FIMHKKKGISSV 140 + + R AL +KQ+D + T R I + + + GQ I K I V Sbjct: 85 VTSPGRIPALLTKQVDAVISIFSITPARAIQIDYSIP----YAGQSAVVIAPKSTSIKGV 140 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY-TGDIS 199 + L G + + GT + L +A N + F+ + A + + DA GD Sbjct: 141 ADLVGKKVGLTRGTGEDGLLTKAAEA-NPGIEILRFDDYSSLLQAMVSGQIDAMGGGDYG 199 Query: 200 ALYALKLTNDRPSEH 214 +Y K N E Sbjct: 200 EIYLKKAQNGDAFEQ 214 >gi|327469096|gb|EGF14568.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK330] gi|328945645|gb|EGG39796.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK1087] Length = 287 Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust. Identities = 38/144 (26%), Positives = 58/144 (40%), Gaps = 20/144 (13%) Query: 37 KCGINTGLVG----FAEVKANGDWKGFDVDFCRALSSAIFDDPSK--IQYLPLNAKERFL 90 K + G VG F+ +G G+D++ RA IF D K + + F Sbjct: 48 KIKVEVGTVGTTKPFSYEDKDGKLTGYDIEVLRA----IFKDSDKYEVNFNKTKWASIFS 103 Query: 91 ALQSKQIDILSRNTDWTLLRE----ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 L S + I + N ++ R + A P ++ K +GI S+ + G Sbjct: 104 GLDSDRYQIGANNISYSEERANKYLYASPYAKNPTV------LVVRKGEGIKSLDDIGGK 157 Query: 147 SICVQAGTTTELTLADYFKAHNMK 170 S V GT+T L DY K H+ K Sbjct: 158 STEVVQGTSTAQQLEDYNKEHSDK 181 >gi|291518711|emb|CBK73932.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [Butyrivibrio fibrisolvens 16/4] Length = 278 Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust. Identities = 32/138 (23%), Positives = 62/138 (44%), Gaps = 14/138 (10%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L I+++G L GI T NG+W GFD D + ++ + +++++ ++ Sbjct: 45 SDLAYIQQKGTLIVGI-TDFAPMDYKDDNGEWIGFDADLAKKVAENL---GVEVEFVEID 100 Query: 85 AKERFLALQSKQIDILSRNTDW---TLLREISLGLAFRPITYFDGQGFIMHKKKG--ISS 139 + L LQ+K ID++ W TL E++ + + Q ++ K I + Sbjct: 101 WDNKILELQNKSIDVV-----WNGMTLTPEVTSSMECSKAYLNNAQVVVVAADKADSIKT 155 Query: 140 VSQLSGASICVQAGTTTE 157 + S V++G+ E Sbjct: 156 SEDAAALSFAVESGSAGE 173 >gi|227891534|ref|ZP_04009339.1| glutamine-binding protein [Lactobacillus salivarius ATCC 11741] gi|227866681|gb|EEJ74102.1| glutamine-binding protein [Lactobacillus salivarius ATCC 11741] Length = 276 Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust. Identities = 30/118 (25%), Positives = 58/118 (49%), Gaps = 7/118 (5%) Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQID-I 99 +T L G +K G +GFDVD + L+ ++ +K++ + AK + L+++ ID + Sbjct: 49 DTRLFGLMNIK-TGQIEGFDVDMAKTLTKKMYGKDAKVKLVQTTAKTKIPLLKNQNIDAV 107 Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQA--GTT 155 ++ T R+I + F + GQ ++ + + +V L+ + V A GTT Sbjct: 108 IAAMTITPERRKI---VEFSQPYFAAGQSLLVPENSTVKNVHDLNKKGMVVLAVKGTT 162 >gi|227894179|ref|ZP_04011984.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus ultunensis DSM 16047] gi|227864009|gb|EEJ71430.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus ultunensis DSM 16047] Length = 191 Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust. Identities = 35/164 (21%), Positives = 69/164 (42%), Gaps = 13/164 (7%) Query: 1 MYKDFFVSILCLIILFFT------SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M K + +++ LF T S I ++ + G++ V K NG Sbjct: 1 MKKKWIFALISFFALFLTGCESVQQRSNTQDTWNKIARKKQVVIGLDDSFVPMGFEKKNG 60 Query: 55 DWKGFDVDFCRALSSAIFDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+D+D L+ A+F ++ + ++ L++ ID+L +++ E Sbjct: 61 QLTGYDID----LAKAVFKQYGIRVSFQTIDWSMNVTELRNGTIDLLW--NGYSITPERK 114 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157 +AF + Q ++ K GI+S +Q+ + +Q G+T E Sbjct: 115 KKVAFSRPYLRNRQVLVVKKNSGINSFNQMHKYELGMQTGSTAE 158 >gi|331645812|ref|ZP_08346915.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli M605] gi|331044564|gb|EGI16691.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli M605] Length = 325 Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust. Identities = 34/155 (21%), Positives = 61/155 (39%), Gaps = 6/155 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 + L I K G + G V F+ G+ D+ A+ A+ + P +++ Sbjct: 53 GNTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 112 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T R+ AF + G + K I Sbjct: 113 LIPITSQNRIPLLQNGTFDFECGSTTNNAERQKQA--AFSNTIFVVGTRLLTKKGGDIKD 170 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + L G ++ V +GTT+E+ L + M I Sbjct: 171 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRII 205 >gi|281177803|dbj|BAI54133.1| glutamate/aspartate ABC transporter substrate binding component [Escherichia coli SE15] gi|330910411|gb|EGH38921.1| glutamate Aspartate periplasmic binding protein precursor GltI [Escherichia coli AA86] Length = 302 Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust. Identities = 34/155 (21%), Positives = 61/155 (39%), Gaps = 6/155 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 + L I K G + G V F+ G+ D+ A+ A+ + P +++ Sbjct: 30 GNTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T R+ AF + G + K I Sbjct: 90 LIPITSQNRIPLLQNGTFDFECGSTTNNAERQKQA--AFSNTIFVVGTRLLTKKGGDIKD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + L G ++ V +GTT+E+ L + M I Sbjct: 148 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRII 182 >gi|134293335|ref|YP_001117071.1| glutamine ABC transporter periplasmic protein [Burkholderia vietnamiensis G4] gi|134136492|gb|ABO57606.1| L-glutamine-binding protein [Burkholderia vietnamiensis G4] Length = 209 Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust. Identities = 43/154 (27%), Positives = 60/154 (38%), Gaps = 18/154 (11%) Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 E K + GFD+D L + I DP K P++ ALQ++ ID+ T Sbjct: 4 EFKQGDKYVGFDLD----LWAEIAKDPGWKYTIQPMDFAGLIPALQTQNIDVALSGM--T 57 Query: 108 LLREISLGLAFRPITYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 + E + F Y G + I S+ L+G I + GT T D+ +A Sbjct: 58 IKEERKKAIDFSAPYYDSGLAAMVQTGNTSIKSIDDLNGKVIAAKTGTAT----IDWIEA 113 Query: 167 HNMKYHPIVFERVEEIDAAY---RAHRCDAYTGD 197 H P + ID AY A R DA D Sbjct: 114 H---LKPKEIRQFPNIDQAYLALEAGRVDAAMRD 144 >gi|296127371|ref|YP_003634623.1| extracellular solute-binding protein family 3 [Brachyspira murdochii DSM 12563] gi|296019187|gb|ADG72424.1| extracellular solute-binding protein family 3 [Brachyspira murdochii DSM 12563] Length = 275 Score = 37.0 bits (84), Expect = 4.5, Method: Compositional matrix adjust. Identities = 34/144 (23%), Positives = 61/144 (42%), Gaps = 8/144 (5%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 ST + L +K G L G++ NG+ GFD+D + ++S + +++ Sbjct: 34 STEDNSLQKVKDAGKLVLGLDDTFAPMGFRDENGEVVGFDIDLAKEVASRL---GVELEI 90 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH--KKKGIS 138 P+ L+L +D+L R+ + + +P Y + + I+ I+ Sbjct: 91 KPIEWSSSILSLNKGDVDVLWNGVTINDARKQQINFS-KP--YLNNRLVIVKAIDDAAIN 147 Query: 139 SVSQLSGASICVQAGTTTELTLAD 162 S LSG + VQ G+ E AD Sbjct: 148 SKDDLSGKVLGVQVGSNDEALTAD 171 >gi|325126022|gb|ADY85352.1| Glutamine ABC transporter solute-binding component [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 227 Score = 37.0 bits (84), Expect = 4.6, Method: Compositional matrix adjust. Identities = 41/191 (21%), Positives = 77/191 (40%), Gaps = 11/191 (5%) Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G +GF++D A++ I SK + P+ K R L + +D + + T+ +E Sbjct: 7 GKIEGFEIDLATAITKQILGPKSKAVFRPITEKTRITLLHNGSLDAVI--STMTITKERM 64 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQA--GTTTELTLADYFKAHNMKY 171 + F + + + I+ K I S++ L+ + V A GT +A ++K Sbjct: 65 KVIDFSDVYFNANESMIVKKSSKIRSIADLNKKGVVVIAIKGTDVANQVAKLASKASVKQ 124 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 F+ A +A + D D L L D P E + +++ P + Sbjct: 125 ----FDDYGSAFNALKAGQGDVMIDDNGILAG--LIADTP-EFTLTKASLAEEPYGIGVE 177 Query: 232 QGDTEWYNIVS 242 +G TE ++ Sbjct: 178 KGQTEMRQAIN 188 >gi|255528434|ref|ZP_05395230.1| extracellular solute-binding protein family 3 [Clostridium carboxidivorans P7] gi|296188321|ref|ZP_06856713.1| bacterial extracellular solute-binding protein, family 3 [Clostridium carboxidivorans P7] gi|255507868|gb|EET84312.1| extracellular solute-binding protein family 3 [Clostridium carboxidivorans P7] gi|296047447|gb|EFG86889.1| bacterial extracellular solute-binding protein, family 3 [Clostridium carboxidivorans P7] Length = 275 Score = 37.0 bits (84), Expect = 4.6, Method: Compositional matrix adjust. Identities = 50/244 (20%), Positives = 90/244 (36%), Gaps = 26/244 (10%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L IKK G LK G+ + KGFD+D + + K +++ + Sbjct: 40 LEKIKKAGVLKVGLEDSFPPMEFRDKQNELKGFDIDMANEIGKKL---GVKTEFVCTDFN 96 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSG 145 LAL+S + D + T R+ ++F + Q ++ + + L G Sbjct: 97 GIILALKSGKFDTIISGLSITDERKKE--ISFSDPYVMNSQIIVVKNGNTAVKGANDLKG 154 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 ++ V GTT+E +K + E ++++ R DA D Sbjct: 155 KTVGVGLGTTSESVATKMQGLKEVKKYDKTTEELQDL----LIGRIDAVIVDEPVGRYYI 210 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 D+ ++ +L + ++K P+ D E + V QK IN++ Sbjct: 211 SEADKKGKYEVLSEKLTKEPMGIGFKNEDKELKDAV----------------QKAINELK 254 Query: 266 KDTT 269 KD T Sbjct: 255 KDGT 258 >gi|192291330|ref|YP_001991935.1| nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein [Rhodopseudomonas palustris TIE-1] gi|192285079|gb|ACF01460.1| NMT1/THI5 like domain protein [Rhodopseudomonas palustris TIE-1] Length = 318 Score = 37.0 bits (84), Expect = 4.6, Method: Compositional matrix adjust. Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 2/73 (2%) Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 G + K GI+S+ L G + + G+T E+ + D A M I RV D A Sbjct: 109 GMAVVAGKDSGIASIKDLKGKKVAIWPGSTQEVVILDRLAAEGMSIKDIQAVRVSFSDMA 168 Query: 186 YRAHR--CDAYTG 196 R DAY G Sbjct: 169 PALARGDIDAYVG 181 >gi|120608918|ref|YP_968596.1| extracellular solute-binding protein [Acidovorax citrulli AAC00-1] gi|120587382|gb|ABM30822.1| amino acid ABC transporter substrate-binding protein, PAAT family [Acidovorax citrulli AAC00-1] Length = 274 Score = 37.0 bits (84), Expect = 4.6, Method: Compositional matrix adjust. Identities = 28/139 (20%), Positives = 63/139 (45%), Gaps = 13/139 (9%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 +L +I+K G ++ I F + + +G+D+D ++ + K++ +P+ + Sbjct: 40 VLANIQKAGVVRVAIPQDFPPFGSLGTDLKLQGYDIDMANLVAKELG---VKVELVPVTS 96 Query: 86 KERFLALQSKQIDI----LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 R L + + D+ L +N + + + + A P + + K+ I + Sbjct: 97 TNRIPYLTTGKADLVISSLGKNAERAKVIDFTQAYAPFPKSVYG------PKEAAIKGPA 150 Query: 142 QLSGASICVQAGTTTELTL 160 L+G +I V G+T +L+L Sbjct: 151 DLAGKTIGVTRGSTEDLSL 169 >gi|297243524|ref|ZP_06927456.1| ABC-type amino acid transport/signal transduction system, periplasmic component [Gardnerella vaginalis AMD] gi|296888569|gb|EFH27309.1| ABC-type amino acid transport/signal transduction system, periplasmic component [Gardnerella vaginalis AMD] Length = 255 Score = 37.0 bits (84), Expect = 4.6, Method: Compositional matrix adjust. Identities = 27/124 (21%), Positives = 60/124 (48%), Gaps = 6/124 (4%) Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 +GF K +G + GFDVD + ++ + +I + +K+R LQ+ +D++ + Sbjct: 26 IGF---KKSGTYVGFDVDVAKYVAKKLGYSEDQIVWKESPSKQRETMLQNGDVDMIVASY 82 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADY 163 T R+ + F + GQ ++ K + +S + L G +C +G+T+ + + + Sbjct: 83 SITDARKKM--VTFAGPYFIAGQDLLVRKDEHKVSGPNDLDGKRLCSVSGSTSAIAIKER 140 Query: 164 FKAH 167 + + Sbjct: 141 YSSK 144 >gi|284007899|emb|CBA73838.1| arginine ABC transporter, substrate-binding protein [Arsenophonus nasoniae] Length = 247 Score = 37.0 bits (84), Expect = 4.6, Method: Compositional matrix adjust. Identities = 36/158 (22%), Positives = 63/158 (39%), Gaps = 20/158 (12%) Query: 47 FAEVKANGDWKGFDVDFCRAL-----SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101 F + AN + GFD+D A+ ++ F S +P +L+ ++ D L Sbjct: 36 FESIDANNNIVGFDIDLANAICKKLDANCTFTHQSFDSLIP--------SLKMRRFDALI 87 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 D T R+ + TY++ + K I+ +S L G I VQ GTT + Sbjct: 88 AGIDITPERQKQVNFTD---TYYNNSATFIAVKNKINKISLLKGKKIGVQNGTTHQ---- 140 Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 Y + + + ++ + + R DA GD + Sbjct: 141 KYIIQQHKEMQAVPYDNYQTAILDLQNGRIDAVFGDTA 178 >gi|229817228|ref|ZP_04447510.1| hypothetical protein BIFANG_02488 [Bifidobacterium angulatum DSM 20098] gi|229785017|gb|EEP21131.1| hypothetical protein BIFANG_02488 [Bifidobacterium angulatum DSM 20098] Length = 275 Score = 37.0 bits (84), Expect = 4.6, Method: Compositional matrix adjust. Identities = 38/167 (22%), Positives = 73/167 (43%), Gaps = 10/167 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +F L + + S G + G ++ GI G K +G + GFD Sbjct: 1 MKKTWFKRALAALCALTCAVSLAG--CGSSQSDGKIRIGIKFDQPGLG-FKKSGTYVGFD 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + ++ + +I + +K+R LQ+ +D + +++ E + F Sbjct: 58 VDVAKYIAKKLGYTEDEIVWKEAPSKQREAMLQNGDVDFIIAT--YSITDERKKVVDFAG 115 Query: 121 ITYFDGQGFIMHKKKGISSV---SQLSGASICVQAGTTTELTLADYF 164 + GQ ++ +KG +SV L+G +C G+T+ +T+ + F Sbjct: 116 PYFVAGQDLLV--RKGDTSVRGPEDLNGKRLCSVTGSTSAVTVKEKF 160 >gi|184154981|ref|YP_001843321.1| glutamine ABC transporter substrate binding component [Lactobacillus fermentum IFO 3956] gi|260663376|ref|ZP_05864267.1| glutamine ABC transporter substrate binding component [Lactobacillus fermentum 28-3-CHN] gi|183226325|dbj|BAG26841.1| glutamine ABC transporter substrate binding component [Lactobacillus fermentum IFO 3956] gi|260552228|gb|EEX25280.1| glutamine ABC transporter substrate binding component [Lactobacillus fermentum 28-3-CHN] gi|299782993|gb|ADJ40991.1| Glutamine ABC transporter substrate binding component [Lactobacillus fermentum CECT 5716] Length = 285 Score = 37.0 bits (84), Expect = 4.6, Method: Compositional matrix adjust. Identities = 32/137 (23%), Positives = 65/137 (47%), Gaps = 7/137 (5%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS-KIQYLPLNAKER 88 I+KRG + G++ V + +G G+D+D L+ A+F K+ + ++ + Sbjct: 39 IEKRGKVIVGLDDSFVPMGFRERDGKLVGYDID----LAKAVFKQYGIKVDFQTIDWSMK 94 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 L++ ID++ +++ E + +AF + Q + KK I++ + + G + Sbjct: 95 ETELKNGTIDLIWNG--YSMTPERAKQVAFSRPYLLNRQVLVTKKKDHINNFNDMKGKVL 152 Query: 149 CVQAGTTTELTLADYFK 165 VQ G+T L +Y K Sbjct: 153 GVQNGSTGMTDLDEYPK 169 >gi|187924805|ref|YP_001896447.1| extracellular solute-binding protein family 3 [Burkholderia phytofirmans PsJN] gi|187715999|gb|ACD17223.1| extracellular solute-binding protein family 3 [Burkholderia phytofirmans PsJN] Length = 324 Score = 37.0 bits (84), Expect = 4.6, Method: Compositional matrix adjust. Identities = 42/174 (24%), Positives = 72/174 (41%), Gaps = 18/174 (10%) Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD-GQGFIMHKKK 135 K+ + + + R L + QID+ +T T+ RE LA ++F I K Sbjct: 109 KVHEITVTSSNRTPMLLNNQIDLECGSTTHTVERE---NLAAFSNSFFQYAVRMIARKNA 165 Query: 136 GISSVSQLSGASICVQAGTTTE--LTLADYFKAHNMKY-----HPIVFERVEEIDAAYRA 188 GI+ L+G ++ AGT+ E L + K NM+ H F +++ Sbjct: 166 GITDFQDLAGKAVVTTAGTSDERLLRRLNTDKLLNMRITSARDHSEAFNTLKD------- 218 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 R A+ D +Y K T+ RP + V+ + A +GD + +V+ Sbjct: 219 GRAVAFVMDEPIVYGFKSTDPRPDDFVVTGTPLGYEVYACMFRKGDEPFRTLVN 272 >gi|290956973|ref|YP_003488155.1| glutamate uptake system binding subunit [Streptomyces scabiei 87.22] gi|260646499|emb|CBG69596.1| glutamate uptake system binding subunit [Streptomyces scabiei 87.22] Length = 283 Score = 37.0 bits (84), Expect = 4.7, Method: Compositional matrix adjust. Identities = 26/121 (21%), Positives = 54/121 (44%), Gaps = 2/121 (1%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 +K GI G +G + GFDVD ++ + DP +I+++ + +R AL Sbjct: 45 IKVGIKYDQPGLGLKNPDGSFSGFDVDVATYVAKELGYDPKQIEFVETKSADRENALARG 104 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 + ++ +++ E + + F Q ++ IS + L+G ++C G+T Sbjct: 105 DVKFIAAT--YSINPERAKLVDFAGPYLLAHQDLLVKADSDISKGTDLNGKTLCSVTGST 162 Query: 156 T 156 + Sbjct: 163 S 163 >gi|242239703|ref|YP_002987884.1| cationic amino acid ABC transporter periplasmic protein [Dickeya dadantii Ech703] gi|242131760|gb|ACS86062.1| cationic amino acid ABC transporter, periplasmic binding protein [Dickeya dadantii Ech703] Length = 243 Score = 37.0 bits (84), Expect = 4.7, Method: Compositional matrix adjust. Identities = 33/124 (26%), Positives = 54/124 (43%), Gaps = 16/124 (12%) Query: 47 FAEVKANGDWKGFDVDFCRALSSAI-----FDDPSKIQYLPLNAKERFLALQSKQIDILS 101 F V A+ GFD+D AL I F + + +P L+ ++ D + Sbjct: 34 FESVDASNQIVGFDIDLANALCKQIQATCTFSNQAFDSLIP--------GLKFRRFDAVI 85 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 D T R+ + +P Y++ + +K I++V+ LSG + VQ GTT + L Sbjct: 86 AGMDITPERQQQVSFT-QP--YYENSAMFIAQKDKIANVAALSGKRVGVQNGTTHQKFLL 142 Query: 162 DYFK 165 D K Sbjct: 143 DKHK 146 >gi|251790904|ref|YP_003005625.1| extracellular solute-binding protein family 3 [Dickeya zeae Ech1591] gi|247539525|gb|ACT08146.1| extracellular solute-binding protein family 3 [Dickeya zeae Ech1591] Length = 260 Score = 37.0 bits (84), Expect = 4.8, Method: Compositional matrix adjust. Identities = 38/152 (25%), Positives = 68/152 (44%), Gaps = 14/152 (9%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 +S+L +I++F S A K+ ++ G++ F +G+ GFD+D A Sbjct: 5 LSLLKIIVIFTISPFAFA-------KQDVIRIGVDLTFPPFQMRDEHGNPAGFDIDITDA 57 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 + ++ +K Y+ + AL +K+ID++S T R+ S+G F + Sbjct: 58 ICKSV---NAKCDYIVNTFDAQIPALLAKKIDVIS-PLGVTKKRKESIG--FSDYAFHLP 111 Query: 127 QGFIMHKKKG-ISSVSQLSGASICVQAGTTTE 157 F+ K+ + L G +I VQ GT E Sbjct: 112 TRFVARKETNLLPQADMLRGKNIAVQQGTIQE 143 >gi|291437322|ref|ZP_06576712.1| secreted protein [Streptomyces ghanaensis ATCC 14672] gi|291340217|gb|EFE67173.1| secreted protein [Streptomyces ghanaensis ATCC 14672] Length = 368 Score = 37.0 bits (84), Expect = 4.8, Method: Compositional matrix adjust. Identities = 68/278 (24%), Positives = 120/278 (43%), Gaps = 40/278 (14%) Query: 19 SFSTNASILGD-----IKKRGFLKCGINTGLVGFAEVK---ANGDWKGFDVDFCRALSSA 70 + ST+A+ L D I+ +G +K G + + +A V+ +G G D D AL Sbjct: 95 TASTSAAPLADKLPQAIRDKGVVKVGSD---IAYAPVEFKDDSGKTVGIDPDVAAALGKQ 151 Query: 71 IFDDPSKIQYLPLNAKERFLALQSKQIDI-LSRNTDWTLLRE---------ISLGLAFRP 120 + K ++ L+SK+ DI +S TD +E + G+ F Sbjct: 152 LG---VKFEFENGTFDTLITGLRSKRYDIAMSAMTDTKDRQEGIDSETGKKVGEGVDF-- 206 Query: 121 ITYFDGQGFIMHKK---KGISSVSQLSGASICVQAGTTTE-LTLADYFKAHNMKYHPI-V 175 + YF I KK +GI + S L G I VQ GT +E L A+ K K I Sbjct: 207 VDYFTAGVSIYTKKGDDQGIKTWSDLCGKKIVVQRGTVSEDLAKAENEKCPTGKKIAIEA 266 Query: 176 FERVEEIDAAYRAHRCDAYTGDIS-ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 F+ ++ RA +A + D A YA+K T+ ++ ++ + + +P AI + + Sbjct: 267 FDNDQQAQTRLRAGGANAGSSDFPVAAYAVK-TSGGGNDFQLVGEQVEAAPYGIAIAKDN 325 Query: 235 TEWYNIVSWTHYAMVTA-------EELGITQKNINQVS 265 T+ + + A++ E+ G+T+ + + + Sbjct: 326 TQLRDAIKAALDAIIENGEYQKILEKWGVTEGAVEEAT 363 >gi|331003319|ref|ZP_08326822.1| hypothetical protein HMPREF0491_01684 [Lachnospiraceae oral taxon 107 str. F0167] gi|330412589|gb|EGG91974.1| hypothetical protein HMPREF0491_01684 [Lachnospiraceae oral taxon 107 str. F0167] Length = 715 Score = 37.0 bits (84), Expect = 4.8, Method: Compositional matrix adjust. Identities = 53/223 (23%), Positives = 97/223 (43%), Gaps = 28/223 (12%) Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICV-QAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y + +++KK ++SV L+G + V + G+ + KA+ M +++ Sbjct: 103 YTESYQIVVNKKLRLNSVEDLAGLRVSVGEEGSGVLKNAKNILKAYGMG--------IDD 154 Query: 182 IDAAYRAHRCDAYT---GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 ID Y + A G+I A + +T P+ + ++ S +A I+ D Sbjct: 155 IDVRYLSFEDAANALKNGEIDAFF---VTASAPTRAI---SELADSNVAIDILSLDERAI 208 Query: 239 NIV--SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDK---SSNIGEALGLTK 293 + S++ Y++ T ++ T K IN +D T V L ++ SSNI L L K Sbjct: 209 RFLQDSYSGYSITTIKKG--TYKGIN---RDITTVGVMAVLVANENMSSSNIETVLNLLK 263 Query: 294 DWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLM 336 + + GN +FD + N E +G N +S+ G++ Sbjct: 264 NHQESFNKISGNTINIFDESTLNSIEANFHKGANTWYSENGII 306 >gi|300951156|ref|ZP_07165019.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 116-1] gi|300959230|ref|ZP_07171305.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 175-1] gi|301643929|ref|ZP_07243956.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 146-1] gi|331641159|ref|ZP_08342294.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli H736] gi|300314159|gb|EFJ63943.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 175-1] gi|300449559|gb|EFK13179.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 116-1] gi|301077699|gb|EFK92505.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 146-1] gi|331037957|gb|EGI10177.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli H736] Length = 327 Score = 37.0 bits (84), Expect = 4.8, Method: Compositional matrix adjust. Identities = 34/155 (21%), Positives = 61/155 (39%), Gaps = 6/155 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 S L I K G + G V F+ G+ D+ A+ A+ + P +++ Sbjct: 55 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 114 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ AF + G + K I Sbjct: 115 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQA--AFSDTIFVVGTRLLTKKGGDIKD 172 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + L ++ V +GTT+E+ L + M I Sbjct: 173 FANLKDKAVVVTSGTTSEVLLNKLNEEQKMNMRII 207 >gi|188583627|ref|YP_001927072.1| extracellular solute-binding protein family 3 [Methylobacterium populi BJ001] gi|179347125|gb|ACB82537.1| extracellular solute-binding protein family 3 [Methylobacterium populi BJ001] Length = 303 Score = 37.0 bits (84), Expect = 4.8, Method: Compositional matrix adjust. Identities = 48/239 (20%), Positives = 90/239 (37%), Gaps = 21/239 (8%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF----DDPSKIQYLP 82 L +K G + G V F+ + N G+ + C ++ A+ D +++ P Sbjct: 30 LKKVKDTGAITIGYRDASVPFSYLDGNQKPVGYAFEICLQVADAVKAHLKRDTLEVRLNP 89 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + + R + + ID+ +T R+ AF + F+ ++KG+ Sbjct: 90 VTSATRIPLIANGTIDLECGSTTNNADRQRQA--AFTNTHFLTATRFVAKREKGLDKTDD 147 Query: 143 LSGASICVQAGTTTELTLADYFKAHNM-------KYHPIVFERVEEIDAAYRAHRCDAYT 195 L G ++ +GTT + + A + K H F VE R DA+ Sbjct: 148 LKGRTVVSTSGTTNIRQINEINTARGLGMRILPAKDHAEAFLMVE-------TGRADAFV 200 Query: 196 GDISALYALKLTNDRPSEHVILPDIISK-SPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 D L AL ++ P + I + S+ P + + D + +V A+ + E Sbjct: 201 MDDVLLAALVASSKTPDAYAISSEAQSRPEPYGIMLRKDDPAFKAVVDAATAALYRSPE 259 >gi|126444872|ref|YP_001063871.1| amino acid ABC transporter periplasmic protein [Burkholderia pseudomallei 668] gi|126224363|gb|ABN87868.1| ABC-type amino acid transport/signal transduction system, domain protein [Burkholderia pseudomallei 668] Length = 240 Score = 37.0 bits (84), Expect = 4.9, Method: Compositional matrix adjust. Identities = 28/119 (23%), Positives = 53/119 (44%), Gaps = 14/119 (11%) Query: 61 VDFCRALSSAIFDDPSK--------IQYLPLNAKERFLALQSKQIDILSRNTDWTLLR-- 110 V F L+ A+ DD K I Y+P+ + R L + D+ +T T R Sbjct: 49 VGFSADLTDAVVDDVRKKLKMPGLQIAYIPVTGQNRNPLLVNDTYDLEGGSTTNTAARGQ 108 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 ++S ++ ++ G ++ K I + L+G ++ AG+T+E + Y H++ Sbjct: 109 DVSFSISL----FYAGTRVLVKKASRIRGYADLAGKTVATAAGSTSENVIRKYAADHHL 163 >gi|16128638|ref|NP_415188.1| glutamate and aspartate transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|89107524|ref|AP_001304.1| glutamate and aspartate transporter subunit [Escherichia coli str. K-12 substr. W3110] gi|170080234|ref|YP_001729554.1| glutamate/aspartate ABC transporter periplasmic-binding protein [Escherichia coli str. K-12 substr. DH10B] gi|170080335|ref|YP_001729655.1| glutamate/aspartate ABC transporter periplasmic-binding protein [Escherichia coli str. K-12 substr. DH10B] gi|238899932|ref|YP_002925728.1| glutamate and aspartate transporter subunit [Escherichia coli BW2952] gi|256023733|ref|ZP_05437598.1| glutamate and aspartate transporter subunit [Escherichia sp. 4_1_40B] gi|301028861|ref|ZP_07192037.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 196-1] gi|307137272|ref|ZP_07496628.1| glutamate and aspartate transporter subunit [Escherichia coli H736] gi|2507365|sp|P37902|GLTI_ECOLI RecName: Full=Glutamate/aspartate periplasmic-binding protein; Flags: Precursor gi|1778573|gb|AAB40856.1| hypothetical protein [Escherichia coli] gi|1786876|gb|AAC73756.1| glutamate and aspartate transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|85674732|dbj|BAA35307.2| glutamate and aspartate transporter subunit [Escherichia coli str. K12 substr. W3110] gi|169888069|gb|ACB01776.1| glutamate and aspartate transporter subunit, periplasmic-binding component of ABC superfamily [Escherichia coli str. K-12 substr. DH10B] gi|169888170|gb|ACB01877.1| glutamate and aspartate transporter subunit, periplasmic-binding component of ABC superfamily [Escherichia coli str. K-12 substr. DH10B] gi|238861328|gb|ACR63326.1| glutamate and aspartate transporter subunit [Escherichia coli BW2952] gi|260450178|gb|ACX40600.1| extracellular solute-binding protein family 3 [Escherichia coli DH1] gi|299878166|gb|EFI86377.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 196-1] gi|315135321|dbj|BAJ42480.1| glutamate and aspartate transporter subunit [Escherichia coli DH1] gi|315616423|gb|EFU97040.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli 3431] gi|323938417|gb|EGB34671.1| bacterial extracellular solute-binding protein 3 [Escherichia coli E1520] gi|323943070|gb|EGB39229.1| extracellular solute-binding protein 3 [Escherichia coli E482] gi|323972110|gb|EGB67324.1| extracellular solute-binding protein 3 [Escherichia coli TA007] Length = 302 Score = 36.6 bits (83), Expect = 5.0, Method: Compositional matrix adjust. Identities = 34/155 (21%), Positives = 61/155 (39%), Gaps = 6/155 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 S L I K G + G V F+ G+ D+ A+ A+ + P +++ Sbjct: 30 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ AF + G + K I Sbjct: 90 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQA--AFSDTIFVVGTRLLTKKGGDIKD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + L ++ V +GTT+E+ L + M I Sbjct: 148 FANLKDKAVVVTSGTTSEVLLNKLNEEQKMNMRII 182 >gi|238753777|ref|ZP_04615138.1| Histidine-binding periplasmic protein of high-affinity histidine transport system [Yersinia ruckeri ATCC 29473] gi|238708013|gb|EEQ00370.1| Histidine-binding periplasmic protein of high-affinity histidine transport system [Yersinia ruckeri ATCC 29473] Length = 259 Score = 36.6 bits (83), Expect = 5.0, Method: Compositional matrix adjust. Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 8/147 (5%) Query: 12 LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI 71 L I + +T +S + K LK G + F+ A+G+ GFD+D + L + I Sbjct: 6 LAISMVLALATASSAFAAVPKT--LKVGTDPTYAPFSSKNASGELVGFDIDLAKELCNRI 63 Query: 72 FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131 +K ++ + +L++K+ID + + T R+ +AF Y I Sbjct: 64 ---DTKCTFVDSDFDALIPSLKAKKIDAIIASLSITEKRQKE--IAFTDKLYAANSRLIA 118 Query: 132 HKKKGIS-SVSQLSGASICVQAGTTTE 157 K I +++ L+G I V G+T E Sbjct: 119 QKSSTIQPTLASLAGKRIGVLQGSTQE 145 >gi|260881751|ref|ZP_05405151.2| glutamine ABC transporter, glutamine-binding protein [Mitsuokella multacida DSM 20544] gi|260848319|gb|EEX68326.1| glutamine ABC transporter, glutamine-binding protein [Mitsuokella multacida DSM 20544] Length = 283 Score = 36.6 bits (83), Expect = 5.1, Method: Compositional matrix adjust. Identities = 45/189 (23%), Positives = 79/189 (41%), Gaps = 24/189 (12%) Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 D++GFDVD RA+ + ++ ++ + ALQ+K+ID+ D T+ + Sbjct: 76 DYEGFDVDIIRAIGA---EEGFDVEISNRSFDGLIPALQAKEIDVAI--NDITITDDRKQ 130 Query: 115 GLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F Y G G ++ I + L G ++ V G+T E A N++ Sbjct: 131 SVDFSKPYYIAGLGVVVRSDNDTIHTAEDLQGKTLGVSIGSTGE-EAARKIPGANVR--- 186 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI------ISKSPLA 227 VF + E + DA DI TN+ H ++ ++K L Sbjct: 187 -VFNAINEAFLEVQNGGVDAVVNDIP-------TNEYYVSHAGNKNVRTAEVALTKEDLG 238 Query: 228 PAIIQGDTE 236 A+++G+TE Sbjct: 239 IAVLKGNTE 247 >gi|315617857|gb|EFU98455.1| cystine-binding periplasmic protein [Escherichia coli 3431] Length = 266 Score = 36.6 bits (83), Expect = 5.1, Method: Compositional matrix adjust. Identities = 46/205 (22%), Positives = 90/205 (43%), Gaps = 11/205 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 +++ ++ + SF+ + +L +K+RG L G+ F+ +G GF+V+F + Sbjct: 15 MAVALVVGMSVKSFA-DEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 73 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + + S P +L SK+ID++ + R+ + P T Sbjct: 74 LAKHLGVEAS---LKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDFS-TPYTISGI 129 Query: 127 QGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 Q + +G I + + L G + V GT E L + +++ + + +++ Sbjct: 130 QALVKKGNEGTIKTAADLKGKKVGVGLGTNYEEWLRQNVQGVDVRTYDDDPTKYQDL--- 186 Query: 186 YRAHRCDAYTGD-ISALYALKLTND 209 R R DA D ++AL +K TND Sbjct: 187 -RVGRIDAILVDRLAALDLVKKTND 210 >gi|284048019|ref|YP_003398358.1| extracellular solute-binding protein family 3 [Acidaminococcus fermentans DSM 20731] gi|283952240|gb|ADB47043.1| extracellular solute-binding protein family 3 [Acidaminococcus fermentans DSM 20731] Length = 259 Score = 36.6 bits (83), Expect = 5.1, Method: Compositional matrix adjust. Identities = 36/151 (23%), Positives = 62/151 (41%), Gaps = 8/151 (5%) Query: 8 SILC-LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFA-EVKANGDWKGFDVDFCR 65 +++C L L + K++ +K G F + K + ++ GFD+D R Sbjct: 6 AVMCVLAALMLAVAGCGSDTKQAAKEQKVIKVGTEPTFAPFEFQEKGSKEFTGFDMDLAR 65 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 A+ + K++ + AL S ID+ + T R+ + + F Y Sbjct: 66 AIGKKL---GKKVEIQNMGFDALIPALNSGNIDVAAAGMSITDERKKA--VTFSDPYYTS 120 Query: 126 GQGFIMHK-KKGISSVSQLSGASICVQAGTT 155 G ++ K G+ S+ L G I VQ GTT Sbjct: 121 GLVVVVTKDNDGVKSIKDLEGKKIAVQIGTT 151 >gi|239928983|ref|ZP_04685936.1| secreted protein [Streptomyces ghanaensis ATCC 14672] Length = 348 Score = 36.6 bits (83), Expect = 5.1, Method: Compositional matrix adjust. Identities = 68/276 (24%), Positives = 119/276 (43%), Gaps = 40/276 (14%) Query: 21 STNASILGD-----IKKRGFLKCGINTGLVGFAEVK---ANGDWKGFDVDFCRALSSAIF 72 ST+A+ L D I+ +G +K G + + +A V+ +G G D D AL + Sbjct: 77 STSAAPLADKLPQAIRDKGVVKVGSD---IAYAPVEFKDDSGKTVGIDPDVAAALGKQLG 133 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDI-LSRNTDWTLLRE---------ISLGLAFRPIT 122 K ++ L+SK+ DI +S TD +E + G+ F + Sbjct: 134 ---VKFEFENGTFDTLITGLRSKRYDIAMSAMTDTKDRQEGIDSETGKKVGEGVDF--VD 188 Query: 123 YFDGQGFIMHKK---KGISSVSQLSGASICVQAGTTTE-LTLADYFKAHNMKYHPI-VFE 177 YF I KK +GI + S L G I VQ GT +E L A+ K K I F+ Sbjct: 189 YFTAGVSIYTKKGDDQGIKTWSDLCGKKIVVQRGTVSEDLAKAENEKCPTGKKIAIEAFD 248 Query: 178 RVEEIDAAYRAHRCDAYTGDIS-ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 ++ RA +A + D A YA+K T+ ++ ++ + + +P AI + +T+ Sbjct: 249 NDQQAQTRLRAGGANAGSSDFPVAAYAVK-TSGGGNDFQLVGEQVEAAPYGIAIAKDNTQ 307 Query: 237 WYNIVSWTHYAMVTA-------EELGITQKNINQVS 265 + + A++ E+ G+T+ + + + Sbjct: 308 LRDAIKAALDAIIENGEYQKILEKWGVTEGAVEEAT 343 >gi|298252814|ref|ZP_06976608.1| ABC-type amino acid transport/signal transduction system, periplasmic component [Gardnerella vaginalis 5-1] gi|297533178|gb|EFH72062.1| ABC-type amino acid transport/signal transduction system, periplasmic component [Gardnerella vaginalis 5-1] Length = 255 Score = 36.6 bits (83), Expect = 5.1, Method: Compositional matrix adjust. Identities = 25/118 (21%), Positives = 57/118 (48%), Gaps = 3/118 (2%) Query: 51 KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 K +G + GFDVD + ++ + +I + +K+R LQ+ +D++ T R Sbjct: 29 KKSGTYVGFDVDVAKYVAKKLGYSEDQIVWKESPSKQRETMLQNGDVDMIVATYSITDAR 88 Query: 111 EISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAH 167 + ++F + GQ ++ K + +S + L G +C +G+T+ + + + + + Sbjct: 89 KKM--VSFAGPYFIAGQDLLIRKDEHKVSGPNDLDGKRLCSVSGSTSAIAIKERYSSK 144 >gi|158424239|ref|YP_001525531.1| ABC transporter substrate binding protein [Azorhizobium caulinodans ORS 571] gi|158331128|dbj|BAF88613.1| ABC transporter substrate binding protein [Azorhizobium caulinodans ORS 571] Length = 264 Score = 36.6 bits (83), Expect = 5.1, Method: Compositional matrix adjust. Identities = 32/132 (24%), Positives = 55/132 (41%), Gaps = 6/132 (4%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 +I +RG ++ G+ G V G+ G+D D ++ + K +Y+ L R Sbjct: 34 EIVQRGTVRIGVLIGGPPMGMVDDKGNPTGYDYDVAVLIAKYLG---VKAEYVALTPPAR 90 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 ALQ+ ++D L + T R S+ P F+ ++ K + S+ L G + Sbjct: 91 IPALQTGRVDFLIATLNPTPERARSVMFTM-PYNAFN--MVVVTKGAKVESLDALKGKKV 147 Query: 149 CVQAGTTTELTL 160 GT E L Sbjct: 148 GATRGTPQEAAL 159 >gi|317486284|ref|ZP_07945116.1| bacterial extracellular solute-binding protein, family 3 [Bilophila wadsworthia 3_1_6] gi|316922454|gb|EFV43708.1| bacterial extracellular solute-binding protein, family 3 [Bilophila wadsworthia 3_1_6] Length = 252 Score = 36.6 bits (83), Expect = 5.2, Method: Compositional matrix adjust. Identities = 28/122 (22%), Positives = 56/122 (45%), Gaps = 6/122 (4%) Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 +G + GFD++ ++ + ++ P++ LQ+ +D+ T+ E Sbjct: 43 DGKFTGFDIELWETIAKKL---GLSYKFQPMDFNGIIPGLQTGNVDV--GIAGMTITPER 97 Query: 113 SLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 + + F Y G ++ +KGIS V L+G + V+ GT++ + D+ KA +K Sbjct: 98 AKVVQFSNGYYTSGLKILVRDDEKGISKVEDLAGKVVAVKTGTSSVPFMKDFGKAKELKQ 157 Query: 172 HP 173 P Sbjct: 158 FP 159 >gi|238795397|ref|ZP_04638912.1| Glutamate/aspartate periplasmic-binding protein [Yersinia mollaretii ATCC 43969] gi|238720516|gb|EEQ12317.1| Glutamate/aspartate periplasmic-binding protein [Yersinia mollaretii ATCC 43969] Length = 309 Score = 36.6 bits (83), Expect = 5.2, Method: Compositional matrix adjust. Identities = 47/249 (18%), Positives = 99/249 (39%), Gaps = 9/249 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQYLP 82 L IK G + G V F+ G+ D+ + A+ + P +++ +P Sbjct: 40 LKKIKDSGVIVVGHRESSVPFSYYDNQQKVVGYAQDYSDLIVDAVKKKLNAPDLQVKLIP 99 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R LQ+ D +T L R+ +F + G + K + Sbjct: 100 ITSQNRIPLLQNGTFDFECGSTTNNLERQQQA--SFSNTIFVVGTRLLTKKGSEVKDFKD 157 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+G ++ V +GTT+E+ L + N+ I + + + R A+ D + L Sbjct: 158 LAGKTVVVTSGTTSEVLLNKLNEKDNLNMRIISAKDHGDSFRTLESGRAVAFMMDDALLA 217 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 + +P + I+ S+ + + D + ++ T + TA+ G+ +K+ + Sbjct: 218 GERAKAKKPDQWDIVGTAQSQEAYGCMLRKNDPAFKALLDET---IATAQTSGVAEKSFD 274 Query: 263 QVSKDTTNP 271 + K+ P Sbjct: 275 RWFKNPIPP 283 >gi|329120282|ref|ZP_08248950.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Neisseria bacilliformis ATCC BAA-1200] gi|327462623|gb|EGF08946.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Neisseria bacilliformis ATCC BAA-1200] Length = 268 Score = 36.6 bits (83), Expect = 5.2, Method: Compositional matrix adjust. Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 12/203 (5%) Query: 37 KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96 + N F + N + +GFDVD A++ A ++++ F AL + Sbjct: 45 RVAANAEFAPFEFMDTNNNVQGFDVDLINAMAKA---GGFRVEFKHQPWDSLFAALGNGD 101 Query: 97 IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS-ICVQAGTT 155 +DIL+ T R+ S+ F Y Q ++ + K I S L A+ + V GTT Sbjct: 102 VDILASAVTITDERKQSMD--FSDPYYKITQVILVPQGKDIKSAEDLKKANKVGVVTGTT 159 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA--LKLTNDRPSE 213 +L + A N K FE + + DA D SA+ A +K ++ Sbjct: 160 GDLAVGKLLGADNGKIAR--FENITLVTKELENGGLDAVVSD-SAVVANYVKNNGNKGFT 216 Query: 214 HVILPDIISKSPLAPAIIQGDTE 236 V +PD ++ + +GDTE Sbjct: 217 MVTVPDFPEEN-YGFVVRKGDTE 238 >gi|300901167|ref|ZP_07119271.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 198-1] gi|301025212|ref|ZP_07188783.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 69-1] gi|300355381|gb|EFJ71251.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 198-1] gi|300396164|gb|EFJ79702.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 69-1] Length = 327 Score = 36.6 bits (83), Expect = 5.3, Method: Compositional matrix adjust. Identities = 34/155 (21%), Positives = 61/155 (39%), Gaps = 6/155 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 S L I K G + G V F+ G+ D+ A+ A+ + P +++ Sbjct: 55 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 114 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ AF + G + K I Sbjct: 115 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQA--AFSDTIFVVGTRLLTKKGGDIKD 172 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + L ++ V +GTT+E+ L + M I Sbjct: 173 FADLKDKAVVVTSGTTSEVLLNKLNEEQKMNMRII 207 >gi|163816014|ref|ZP_02207384.1| hypothetical protein COPEUT_02194 [Coprococcus eutactus ATCC 27759] gi|158448824|gb|EDP25819.1| hypothetical protein COPEUT_02194 [Coprococcus eutactus ATCC 27759] Length = 289 Score = 36.6 bits (83), Expect = 5.3, Method: Compositional matrix adjust. Identities = 39/158 (24%), Positives = 67/158 (42%), Gaps = 12/158 (7%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 S S + S L +K +G L GI T +G+W GFD D A + ++ K Sbjct: 51 SKSESKSDLEYVKDKGTLVVGI-TDFAPMDYKDESGNWIGFDADMASAFAESL---GVKA 106 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-- 136 +++ ++ + + L K ID + TL E++ +A + Q I+ K K Sbjct: 107 EFVEIDWDNKIMELDGKTIDCVWNG--MTLTDEVTSSMACSDAYCNNAQVVIVPKDKADK 164 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 +V + + V+AG+ E D KA + Y + Sbjct: 165 YQTVDSIKELTFAVEAGSAGE----DQAKALGLNYTAV 198 >gi|309700894|emb|CBJ00191.1| glutamate/aspartate ABC transporter, substrate-binding protein [Escherichia coli ETEC H10407] Length = 302 Score = 36.6 bits (83), Expect = 5.4, Method: Compositional matrix adjust. Identities = 34/155 (21%), Positives = 61/155 (39%), Gaps = 6/155 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 S L I K G + G V F+ G+ D+ A+ A+ + P +++ Sbjct: 30 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ AF + G + K I Sbjct: 90 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQA--AFSDTIFVVGTRLLTKKGGDIKD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + L ++ V +GTT+E+ L + M I Sbjct: 148 FANLKDKAVVVTSGTTSEVLLNKLNEEQKMNMRII 182 >gi|239908611|ref|YP_002955353.1| bacterial extracellular solute-binding protein [Desulfovibrio magneticus RS-1] gi|239798478|dbj|BAH77467.1| bacterial extracellular solute-binding protein [Desulfovibrio magneticus RS-1] Length = 270 Score = 36.6 bits (83), Expect = 5.4, Method: Compositional matrix adjust. Identities = 60/254 (23%), Positives = 100/254 (39%), Gaps = 30/254 (11%) Query: 6 FVSILCLIILFFTSFSTNA-----------SILGDIKKRGFLKCGINTGLVGFAEVKANG 54 F+ ++CL + T A S L I KRG L G+ F V G Sbjct: 4 FIRVVCLAFVALTMCCGTALAITPYDIYEGSALRQIVKRGKLVVGMELKFWPFEYVDEKG 63 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 GFDVD + L+ + +++ + AL S +ID++ TL R ++ Sbjct: 64 KPVGFDVDIAKTLAERL---GVELEIKDMEWTGLIPALTSGKIDLIISGITGTLERAKTI 120 Query: 115 GLAFRPITYFDGQGFIM---HKKKGISSVSQLS--GASICVQAGTTTELTLADYF-KAHN 168 + YF I+ K ++ + L G I V+ GTT ++ A F KA Sbjct: 121 TFSS---PYFTTGLCILASVQKAPDLTDAAGLDKPGRVIAVKTGTTADIVAAKRFPKATI 177 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 +Y E D A A R DA+ D ++ + + ++ ++ P + P Sbjct: 178 NRYQD---ETACAADVA--AGRADAFIYDQISIAKHQKQHPETTKALLTP--FTYEPFCI 230 Query: 229 AIIQGDTEWYNIVS 242 A+ +GD + + V Sbjct: 231 AMQKGDFDLWQYVE 244 >gi|170680102|ref|YP_001742772.1| glutamate and aspartate transporter subunit [Escherichia coli SMS-3-5] gi|218549769|ref|YP_002383560.1| glutamate and aspartate transporter subunit [Escherichia fergusonii ATCC 35469] gi|218553197|ref|YP_002386110.1| glutamate and aspartate transporter subunit [Escherichia coli IAI1] gi|218703989|ref|YP_002411508.1| glutamate and aspartate transporter subunit [Escherichia coli UMN026] gi|293403917|ref|ZP_06647911.1| glutamate and aspartate transporter subunit [Escherichia coli FVEC1412] gi|298379692|ref|ZP_06989297.1| glutamate and aspartate transporter subunit [Escherichia coli FVEC1302] gi|331662021|ref|ZP_08362944.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli TA143] gi|170517820|gb|ACB15998.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli SMS-3-5] gi|218357310|emb|CAQ89945.1| glutamate and aspartate transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia fergusonii ATCC 35469] gi|218359965|emb|CAQ97509.1| glutamate and aspartate transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli IAI1] gi|218431086|emb|CAR11962.1| glutamate and aspartate transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli UMN026] gi|291428503|gb|EFF01528.1| glutamate and aspartate transporter subunit [Escherichia coli FVEC1412] gi|298279390|gb|EFI20898.1| glutamate and aspartate transporter subunit [Escherichia coli FVEC1302] gi|323170779|gb|EFZ56429.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli LT-68] gi|323945130|gb|EGB41192.1| bacterial extracellular solute-binding protein 3 [Escherichia coli H120] gi|323967602|gb|EGB63018.1| extracellular solute-binding protein 3 [Escherichia coli M863] gi|324114776|gb|EGC08744.1| extracellular solute-binding protein 3 [Escherichia fergusonii B253] gi|327254340|gb|EGE65962.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli STEC_7v] gi|331060443|gb|EGI32407.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli TA143] Length = 302 Score = 36.6 bits (83), Expect = 5.4, Method: Compositional matrix adjust. Identities = 34/155 (21%), Positives = 61/155 (39%), Gaps = 6/155 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 S L I K G + G V F+ G+ D+ A+ A+ + P +++ Sbjct: 30 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ AF + G + K I Sbjct: 90 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQA--AFSDTIFVVGTRLLTKKGGDIKD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + L ++ V +GTT+E+ L + M I Sbjct: 148 FADLKDKAVVVTSGTTSEVLLNKLNEEQKMNMRII 182 >gi|39935743|ref|NP_948019.1| putative ABC transporter substrate-binding protein [Rhodopseudomonas palustris CGA009] gi|39649596|emb|CAE28118.1| putative substrate-binding protein, subunit of ABC transporter [Rhodopseudomonas palustris CGA009] Length = 318 Score = 36.6 bits (83), Expect = 5.4, Method: Compositional matrix adjust. Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 2/73 (2%) Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 G + K GI+S+ L G + + G+T E+ + D A M I RV D A Sbjct: 109 GMAVVAGKDSGIASIKDLKGKKVAIWPGSTQEVVILDRLAAEGMSIKDIQAVRVSFSDMA 168 Query: 186 YRAHR--CDAYTG 196 R DAY G Sbjct: 169 PALARGDIDAYVG 181 >gi|300907833|ref|ZP_07125449.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 84-1] gi|301302137|ref|ZP_07208270.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 124-1] gi|309795477|ref|ZP_07689894.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 145-7] gi|300400465|gb|EFJ84003.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 84-1] gi|300842689|gb|EFK70449.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 124-1] gi|308120852|gb|EFO58114.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 145-7] gi|315255039|gb|EFU35007.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 85-1] Length = 327 Score = 36.6 bits (83), Expect = 5.4, Method: Compositional matrix adjust. Identities = 34/155 (21%), Positives = 61/155 (39%), Gaps = 6/155 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 S L I K G + G V F+ G+ D+ A+ A+ + P +++ Sbjct: 55 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 114 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ AF + G + K I Sbjct: 115 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQA--AFSDTIFVVGTRLLTKKGGDIKD 172 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + L ++ V +GTT+E+ L + M I Sbjct: 173 FADLKDKAVVVTSGTTSEVLLNKLNEEQKMNMRII 207 >gi|295693562|ref|YP_003602172.1| amino acid ABC transporter, amino acid-binding protein [Lactobacillus crispatus ST1] gi|295031668|emb|CBL51147.1| Amino acid ABC transporter, amino acid-binding protein [Lactobacillus crispatus ST1] Length = 271 Score = 36.6 bits (83), Expect = 5.4, Method: Compositional matrix adjust. Identities = 37/162 (22%), Positives = 66/162 (40%), Gaps = 13/162 (8%) Query: 3 KDFFVSILCLIILFFTSFST------NASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 K + + I IILF T + I + + G++ V K NG Sbjct: 2 KKWILGIALAIILFLTGCQSVQKEANTQDTWNKIASKKQVVIGLDDSFVPMGFEKKNGQL 61 Query: 57 KGFDVDFCRALSSAIFDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G+D+D L+ A+F K+ + ++ L++ ID+L +++ E Sbjct: 62 TGYDID----LAKAVFRQYGIKVSFQTVDWSMNVTELRNGTIDLLWNG--YSITPERKKK 115 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157 +AF + Q ++ K GI S Q+ + +Q G+T E Sbjct: 116 VAFSKPYLRNRQVLVVKKDSGIRSFKQMKQYELGMQTGSTAE 157 >gi|238898833|ref|YP_002924515.1| arginine transport protein (ABC superfamily, peri_bind) [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229466593|gb|ACQ68367.1| arginine transport protein (ABC superfamily, peri_bind) [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 249 Score = 36.6 bits (83), Expect = 5.4, Method: Compositional matrix adjust. Identities = 43/192 (22%), Positives = 82/192 (42%), Gaps = 14/192 (7%) Query: 12 LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI 71 L++ F + + A L ++ L+ F + A+ + +GFD+D +AL + Sbjct: 4 LVLSVFFALVSLAISLSVFAEKKILRFATEASYPPFEFMSAHNEIEGFDIDLAKALCQKM 63 Query: 72 FDDPSKIQYLPLNAKERFL--ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 +I+ + +N L +L+S++ID + D T E S +AF I Y Sbjct: 64 -----QIECVFVNQAFDSLIPSLKSRRIDAVIAGLDIT--PERSKQVAFT-IPYCKNSAL 115 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 + + + + L G + +Q G+T + L D + + PI + + + Sbjct: 116 FIIQTGKFAGIDDLQGKRVGMQNGSTHQKFLMD----EHPEMIPISYSTYQNAILDLKNG 171 Query: 190 RCDAYTGDISAL 201 R DA GD +A+ Sbjct: 172 RLDAVFGDTAAV 183 >gi|146308593|ref|YP_001189058.1| cationic amino acid ABC transporter, periplasmic binding protein [Pseudomonas mendocina ymp] gi|145576794|gb|ABP86326.1| L-ornithine-binding protein / L-arginine-binding protein [Pseudomonas mendocina ymp] Length = 258 Score = 36.6 bits (83), Expect = 5.4, Method: Compositional matrix adjust. Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 8/137 (5%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 L+ GI FA +ANG+ GFDVD AL + + + Q++ +L+ K Sbjct: 26 LRLGIEAAYPPFAYKEANGEIAGFDVDIGNALCAEM---KVQCQWVEQEFDGLIPSLKVK 82 Query: 96 QID-ILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAG 153 ++D ILS T+ E + F Y+ +M + + + + L G I VQ Sbjct: 83 KVDAILS---SMTITDERRKSVDFTGKYYYSPARLVMKEGSTVDADFANLKGKRIGVQRA 139 Query: 154 TTTELTLADYFKAHNMK 170 TTT+ + A ++ Sbjct: 140 TTTDRFASSVMAAQGVQ 156 >gi|22126343|ref|NP_669766.1| cystine transporter subunit [Yersinia pestis KIM 10] gi|45441366|ref|NP_992905.1| cystine transporter subunit [Yersinia pestis biovar Microtus str. 91001] gi|51596053|ref|YP_070244.1| cystine transporter subunit [Yersinia pseudotuberculosis IP 32953] gi|108807218|ref|YP_651134.1| cystine transporter subunit [Yersinia pestis Antiqua] gi|108812438|ref|YP_648205.1| cystine transporter subunit [Yersinia pestis Nepal516] gi|149366208|ref|ZP_01888243.1| putative cystine-binding periplasmic protein [Yersinia pestis CA88-4125] gi|153949990|ref|YP_001401243.1| cystine transporter subunit [Yersinia pseudotuberculosis IP 31758] gi|162420780|ref|YP_001606501.1| cystine transporter subunit [Yersinia pestis Angola] gi|165925949|ref|ZP_02221781.1| cystine-binding periplasmic protein FliY [Yersinia pestis biovar Orientalis str. F1991016] gi|165938780|ref|ZP_02227335.1| cystine-binding periplasmic protein FliY [Yersinia pestis biovar Orientalis str. IP275] gi|166010832|ref|ZP_02231730.1| cystine-binding periplasmic protein FliY [Yersinia pestis biovar Antiqua str. E1979001] gi|166210652|ref|ZP_02236687.1| cystine-binding periplasmic protein FliY [Yersinia pestis biovar Antiqua str. B42003004] gi|167401164|ref|ZP_02306667.1| cystine-binding periplasmic protein FliY [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167420150|ref|ZP_02311903.1| cystine-binding periplasmic protein FliY [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425781|ref|ZP_02317534.1| cystine-binding periplasmic protein FliY [Yersinia pestis biovar Mediaevalis str. K1973002] gi|170024601|ref|YP_001721106.1| cystine transporter subunit [Yersinia pseudotuberculosis YPIII] gi|186895159|ref|YP_001872271.1| cystine transporter subunit [Yersinia pseudotuberculosis PB1/+] gi|218928965|ref|YP_002346840.1| cystine transporter subunit [Yersinia pestis CO92] gi|229896294|ref|ZP_04511464.1| cystine transporter subunit; periplasmic-binding component of ABC superfamily [Yersinia pestis Pestoides A] gi|229897231|ref|ZP_04512387.1| cystine transporter subunit; periplasmic-binding component of ABC superfamily [Yersinia pestis biovar Orientalis str. PEXU2] gi|229897958|ref|ZP_04513109.1| cystine transporter subunit; periplasmic-binding component of ABC superfamily [Yersinia pestis biovar Orientalis str. India 195] gi|229902811|ref|ZP_04517928.1| cystine transporter subunit; periplasmic-binding component of ABC superfamily [Yersinia pestis Nepal516] gi|270486600|ref|ZP_06203674.1| bacterial extracellular solute-binding protein, family 3 [Yersinia pestis KIM D27] gi|294503991|ref|YP_003568053.1| putative cystine-binding periplasmic protein [Yersinia pestis Z176003] gi|21959325|gb|AAM86017.1|AE013849_8 putative periplasmic cysteine-binding ABC transport protein [Yersinia pestis KIM 10] gi|45436226|gb|AAS61782.1| putative cystine-binding periplasmic protein [Yersinia pestis biovar Microtus str. 91001] gi|51589335|emb|CAH20957.1| putative cystine-binding periplasmic protein [Yersinia pseudotuberculosis IP 32953] gi|108776086|gb|ABG18605.1| cystine-binding periplasmic protein [Yersinia pestis Nepal516] gi|108779131|gb|ABG13189.1| putative cystine-binding periplasmic protein [Yersinia pestis Antiqua] gi|115347576|emb|CAL20486.1| putative cystine-binding periplasmic protein [Yersinia pestis CO92] gi|149292621|gb|EDM42695.1| putative cystine-binding periplasmic protein [Yersinia pestis CA88-4125] gi|152961485|gb|ABS48946.1| cystine-binding periplasmic protein FliY [Yersinia pseudotuberculosis IP 31758] gi|162353595|gb|ABX87543.1| cystine-binding periplasmic protein FliY [Yersinia pestis Angola] gi|165913394|gb|EDR32016.1| cystine-binding periplasmic protein FliY [Yersinia pestis biovar Orientalis str. IP275] gi|165922153|gb|EDR39330.1| cystine-binding periplasmic protein FliY [Yersinia pestis biovar Orientalis str. F1991016] gi|165990176|gb|EDR42477.1| cystine-binding periplasmic protein FliY [Yersinia pestis biovar Antiqua str. E1979001] gi|166207832|gb|EDR52312.1| cystine-binding periplasmic protein FliY [Yersinia pestis biovar Antiqua str. B42003004] gi|166961845|gb|EDR57866.1| cystine-binding periplasmic protein FliY [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167049553|gb|EDR60961.1| cystine-binding periplasmic protein FliY [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167055180|gb|EDR64977.1| cystine-binding periplasmic protein FliY [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169751135|gb|ACA68653.1| extracellular solute-binding protein family 3 [Yersinia pseudotuberculosis YPIII] gi|186698185|gb|ACC88814.1| extracellular solute-binding protein family 3 [Yersinia pseudotuberculosis PB1/+] gi|229680258|gb|EEO76357.1| cystine transporter subunit; periplasmic-binding component of ABC superfamily [Yersinia pestis Nepal516] gi|229688999|gb|EEO81064.1| cystine transporter subunit; periplasmic-binding component of ABC superfamily [Yersinia pestis biovar Orientalis str. India 195] gi|229693568|gb|EEO83617.1| cystine transporter subunit; periplasmic-binding component of ABC superfamily [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701217|gb|EEO89246.1| cystine transporter subunit; periplasmic-binding component of ABC superfamily [Yersinia pestis Pestoides A] gi|262361824|gb|ACY58545.1| putative cystine-binding periplasmic protein [Yersinia pestis D106004] gi|262366040|gb|ACY62597.1| putative cystine-binding periplasmic protein [Yersinia pestis D182038] gi|270335104|gb|EFA45881.1| bacterial extracellular solute-binding protein, family 3 [Yersinia pestis KIM D27] gi|294354450|gb|ADE64791.1| putative cystine-binding periplasmic protein [Yersinia pestis Z176003] gi|320015413|gb|ADV98984.1| cystine transporter subunit; periplasmic-binding component of ABC superfamily [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 266 Score = 36.6 bits (83), Expect = 5.4, Method: Compositional matrix adjust. Identities = 46/189 (24%), Positives = 80/189 (42%), Gaps = 16/189 (8%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 +L +K+RG L G+ F+ +G GF+VDF AL+ + K + P Sbjct: 33 LLEQVKQRGTLIVGLEGTYPPFSFQGEDGKLTGFEVDFANALAEHM---GVKAKITPTKW 89 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG----ISSVS 141 +L+SK+ID+ + R+ + T + G + KKG + Sbjct: 90 DGMLASLESKRIDVAINQVTISDERKKKYDFS----TPYTVSGIQVLTKKGNEGQFTKPE 145 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD-ISA 200 L G + V G+ E L + K +++ + + +++ R R DA D ++A Sbjct: 146 DLQGKKVGVGLGSNYEQWLRENLKDVDIRTYDDDPTKYQDL----RVGRTDAILVDRLAA 201 Query: 201 LYALKLTND 209 L +K TND Sbjct: 202 LDLVKKTND 210 >gi|300904807|ref|ZP_07122634.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 84-1] gi|301305261|ref|ZP_07211358.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 124-1] gi|300403275|gb|EFJ86813.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 84-1] gi|300839467|gb|EFK67227.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 124-1] gi|315257249|gb|EFU37217.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 85-1] Length = 266 Score = 36.6 bits (83), Expect = 5.5, Method: Compositional matrix adjust. Identities = 46/205 (22%), Positives = 86/205 (41%), Gaps = 10/205 (4%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V ++ L+ + +L +K+RG L G+ F+ +G GF+V+F + Sbjct: 14 VMVVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 73 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + + S P +L SK+ID++ + R+ + P T Sbjct: 74 LAKHLGVEAS---LKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDFS-TPYTISGI 129 Query: 127 QGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 Q + +G I + + L G + V GT E L + +++ + + +++ Sbjct: 130 QALVKKGNEGTIKTAADLKGKKVGVGLGTNYEEWLRQNVQGVDVRTYDDDPTKYQDL--- 186 Query: 186 YRAHRCDAYTGD-ISALYALKLTND 209 R R DA D ++AL +K TND Sbjct: 187 -RVGRIDAILVDRLAALDLVKKTND 210 >gi|21223285|ref|NP_629064.1| bifunctional protein [Streptomyces coelicolor A3(2)] gi|20520711|emb|CAD30902.1| putative bifunctional protein [Streptomyces coelicolor A3(2)] Length = 670 Score = 36.6 bits (83), Expect = 5.5, Method: Compositional matrix adjust. Identities = 21/83 (25%), Positives = 39/83 (46%) Query: 51 KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 K G W GFDVD AL+ + +++ + + R L++ ++D++ + T R Sbjct: 437 KDTGVWSGFDVDIAYALAGKLGYGKAQVDFYGVTTANRASKLKNGEVDLVVASYSMTPER 496 Query: 111 EISLGLAFRPITYFDGQGFIMHK 133 E G++F Y G ++ K Sbjct: 497 EKRDGISFVGPYYKAGSSLLVRK 519 >gi|256785609|ref|ZP_05524040.1| bifunctional protein [Streptomyces lividans TK24] gi|289769505|ref|ZP_06528883.1| conserved hypothetical protein [Streptomyces lividans TK24] gi|289699704|gb|EFD67133.1| conserved hypothetical protein [Streptomyces lividans TK24] Length = 691 Score = 36.6 bits (83), Expect = 5.6, Method: Compositional matrix adjust. Identities = 21/83 (25%), Positives = 39/83 (46%) Query: 51 KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 K G W GFDVD AL+ + +++ + + R L++ ++D++ + T R Sbjct: 458 KDTGVWSGFDVDIAYALAGKLGYGKAQVDFYGVTTANRASKLKNGEVDLVVASYSMTPER 517 Query: 111 EISLGLAFRPITYFDGQGFIMHK 133 E G++F Y G ++ K Sbjct: 518 EKRDGISFVGPYYKAGSSLLVRK 540 >gi|238893716|ref|YP_002918450.1| glutamate and aspartate transporter subunit [Klebsiella pneumoniae NTUH-K2044] gi|238546032|dbj|BAH62383.1| glutamate/aspartate periplasmic binding protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 328 Score = 36.6 bits (83), Expect = 5.6, Method: Compositional matrix adjust. Identities = 33/140 (23%), Positives = 58/140 (41%), Gaps = 6/140 (4%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQY 80 + L I K G + G V F+ G+ D+ A+ AI + P +++ Sbjct: 57 NTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVDAIKKKLNKPDLQVKL 116 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +P+ ++ R LQ+ D +T L R+ AF + G ++ K I Sbjct: 117 IPVTSQNRIPLLQNGTFDFECGSTTNNLERQKQA--AFSDTIFVVGTRLLVKKGGPIKDF 174 Query: 141 SQLSGASICVQAGTTTELTL 160 L ++ V +GTT+E+ L Sbjct: 175 PDLKDKAVVVTSGTTSEILL 194 >gi|300937877|ref|ZP_07152670.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 21-1] gi|300457120|gb|EFK20613.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 21-1] gi|325498166|gb|EGC96025.1| glutamate and aspartate transporter subunit [Escherichia fergusonii ECD227] Length = 325 Score = 36.6 bits (83), Expect = 5.7, Method: Compositional matrix adjust. Identities = 34/155 (21%), Positives = 61/155 (39%), Gaps = 6/155 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 S L I K G + G V F+ G+ D+ A+ A+ + P +++ Sbjct: 53 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 112 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ AF + G + K I Sbjct: 113 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQA--AFSDTIFVVGTRLLTKKGGDIKD 170 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + L ++ V +GTT+E+ L + M I Sbjct: 171 FADLKDKAVVVTSGTTSEVLLNKLNEEQKMNMRII 205 >gi|238854965|ref|ZP_04645295.1| glutamine-binding protein [Lactobacillus jensenii 269-3] gi|260664250|ref|ZP_05865103.1| amino acid ABC transporter periplasmic protein [Lactobacillus jensenii SJ-7A-US] gi|282931676|ref|ZP_06337169.1| glutamine-binding protein [Lactobacillus jensenii 208-1] gi|313472445|ref|ZP_07812937.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Lactobacillus jensenii 1153] gi|238832755|gb|EEQ25062.1| glutamine-binding protein [Lactobacillus jensenii 269-3] gi|239530142|gb|EEQ69143.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Lactobacillus jensenii 1153] gi|260562136|gb|EEX28105.1| amino acid ABC transporter periplasmic protein [Lactobacillus jensenii SJ-7A-US] gi|281304287|gb|EFA96396.1| glutamine-binding protein [Lactobacillus jensenii 208-1] Length = 275 Score = 36.6 bits (83), Expect = 5.7, Method: Compositional matrix adjust. Identities = 58/248 (23%), Positives = 103/248 (41%), Gaps = 29/248 (11%) Query: 2 YKDFFVSILCLIILFFTSF---STNASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDW 56 Y+ F S L++L ++ S ++ IK + G+ +T L G +K + Sbjct: 5 YRWIFASFSLLVLLTLSACQNKSKSSDTYEKIKTSQAITWGVKADTRLFGIMNIKTS-QL 63 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +GF++D + LS + K+ + AK + L++ +D L + T+ +E + Sbjct: 64 EGFEIDLAKELSKKMLGKNIKVNLVQTTAKTKIPLLRNGSVDALL--STMTITKERKKIV 121 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQA--GTTTELTLADYFKAHNMKYHPI 174 F + GQ ++ + I +V L+ I V A GTT A+ K+ P Sbjct: 122 DFSTPYFNAGQAILVPQNSKIRNVYDLNKNGITVLAVKGTTAV--------ANIRKFAPK 173 Query: 175 VFERVEEID------AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 V E D +A +A + A T D L + N P ++ S+ P Sbjct: 174 A--SVSEYDDYGQAFSALKAGQGQALTSDNGILAGIAAEN--PGFKIVGGTFTSE-PYGI 228 Query: 229 AIIQGDTE 236 A+ +GDT+ Sbjct: 229 AVRKGDTK 236 >gi|293418767|ref|ZP_06661202.1| LOW QUALITY PROTEIN: glutamate and aspartate transporter subunit [Escherichia coli B088] gi|291325295|gb|EFE64710.1| LOW QUALITY PROTEIN: glutamate and aspartate transporter subunit [Escherichia coli B088] Length = 301 Score = 36.6 bits (83), Expect = 5.8, Method: Compositional matrix adjust. Identities = 34/155 (21%), Positives = 61/155 (39%), Gaps = 6/155 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 S L I K G + G V F+ G+ D+ A+ A+ + P +++ Sbjct: 30 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ AF + G + K I Sbjct: 90 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQA--AFSDTIFVVGTRLLTKKGGDIKD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + L ++ V +GTT+E+ L + M I Sbjct: 148 FADLKDKAVVVTSGTTSEVLLNKLNEEQKMNMRII 182 >gi|83646475|ref|YP_434910.1| cystine transporter subunit [Hahella chejuensis KCTC 2396] gi|83634518|gb|ABC30485.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Hahella chejuensis KCTC 2396] Length = 266 Score = 36.6 bits (83), Expect = 5.8, Method: Compositional matrix adjust. Identities = 39/166 (23%), Positives = 68/166 (40%), Gaps = 13/166 (7%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 +L I+KRG ++ G+ F NG GF+V+F +AL+ + K +Y Sbjct: 33 LLQSIQKRGSIQVGLEGTYPPFNYQDENGQLTGFEVEFAKALADRL---GVKAEYQTTKW 89 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLS 144 AL+S+++D++ + R+ + P T Q + I+ S L+ Sbjct: 90 DGLLAALESERLDVVINQVTISDARKKKYDFS-APYTVSGIQALTRKDLESEINGPSDLA 148 Query: 145 GASICVQAGTTTELTLAD--------YFKAHNMKYHPIVFERVEEI 182 G + V GT E L + + KY + F R++ I Sbjct: 149 GMKVGVGLGTNYETWLRENSPQAEVKTYDDDPTKYQDLRFGRIDAI 194 >gi|82543098|ref|YP_407045.1| glutamate and aspartate transporter subunit [Shigella boydii Sb227] gi|157157607|ref|YP_001461825.1| glutamate and aspartate transporter subunit [Escherichia coli E24377A] gi|191168682|ref|ZP_03030462.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli B7A] gi|81244509|gb|ABB65217.1| putative periplasmic binding transport protein [Shigella boydii Sb227] gi|157079637|gb|ABV19345.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli E24377A] gi|190901274|gb|EDV61043.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli B7A] gi|320174704|gb|EFW49836.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Shigella dysenteriae CDC 74-1112] gi|320185366|gb|EFW60136.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Shigella flexneri CDC 796-83] gi|332097776|gb|EGJ02750.1| glutamate/aspartate periplasmic-binding protein [Shigella boydii 3594-74] Length = 302 Score = 36.6 bits (83), Expect = 5.8, Method: Compositional matrix adjust. Identities = 34/155 (21%), Positives = 61/155 (39%), Gaps = 6/155 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 S L I K G + G V F+ G+ D+ A+ A+ + P +++ Sbjct: 30 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ AF + G + K I Sbjct: 90 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQA--AFSDTIFVVGTRLLTKKGGDIKD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + L ++ V +GTT+E+ L + M I Sbjct: 148 FADLKDKAVVVTSGTTSEVLLNKLNEEQKMNMRII 182 >gi|256851553|ref|ZP_05556942.1| amino acid ABC transporter periplasmic protein [Lactobacillus jensenii 27-2-CHN] gi|260660976|ref|ZP_05861891.1| amino acid ABC transporter periplasmic protein [Lactobacillus jensenii 115-3-CHN] gi|282932201|ref|ZP_06337649.1| glutamine-binding protein [Lactobacillus jensenii 208-1] gi|297206368|ref|ZP_06923763.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus jensenii JV-V16] gi|256616615|gb|EEU21803.1| amino acid ABC transporter periplasmic protein [Lactobacillus jensenii 27-2-CHN] gi|260548698|gb|EEX24673.1| amino acid ABC transporter periplasmic protein [Lactobacillus jensenii 115-3-CHN] gi|281303688|gb|EFA95842.1| glutamine-binding protein [Lactobacillus jensenii 208-1] gi|297149494|gb|EFH29792.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus jensenii JV-V16] Length = 275 Score = 36.6 bits (83), Expect = 5.9, Method: Compositional matrix adjust. Identities = 44/201 (21%), Positives = 84/201 (41%), Gaps = 12/201 (5%) Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 +T L G +K + +GF++D + LS + K+ + AK + L++ +D L Sbjct: 49 DTRLFGIMNIKTS-QLEGFEIDLAKDLSKKMLGKNVKVNLVQTTAKTKIPLLRNGSVDAL 107 Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQA--GTTTEL 158 + T+ E + F + GQ ++ K + +V L I V A GTT Sbjct: 108 L--STMTITEERKKIVDFSTPYFNAGQAILVPKNSKLKNVYDLKKRGITVLAVKGTTAVA 165 Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218 + + N+ ++ + +A +A + A T D L + ++ P ++ Sbjct: 166 NIKKFAPKANVSE----YDDYGQAFSALKAGQGQALTTDNGILAG--IADENPGFKIVGG 219 Query: 219 DIISKSPLAPAIIQGDTEWYN 239 S+ P A+ +GDT+ N Sbjct: 220 TFTSE-PYGIAVRKGDTKLRN 239 >gi|121604395|ref|YP_981724.1| extracellular solute-binding protein [Polaromonas naphthalenivorans CJ2] gi|120593364|gb|ABM36803.1| amino acid ABC transporter substrate-binding protein, PAAT family [Polaromonas naphthalenivorans CJ2] Length = 268 Score = 36.6 bits (83), Expect = 5.9, Method: Compositional matrix adjust. Identities = 30/142 (21%), Positives = 63/142 (44%), Gaps = 9/142 (6%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + +A + DIKK+G L G+ + + ++ G+D D R L+ D K+ Sbjct: 29 AASAQSVADIKKKGELTVGMLVDFPPYGTMNSSNQPDGYDADVARLLAK---DLGVKVNL 85 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH--KKKGIS 138 +P+ R L + ++D+L + T R + + +P + +++ KK + Sbjct: 86 VPVTGPNRIPFLLTNKVDLLVASLAVTPERAKQVQFS-KP---YAAASIVLYGDKKASLK 141 Query: 139 SVSQLSGASICVQAGTTTELTL 160 + + L G + V +T ++ L Sbjct: 142 APADLKGKRVGVARASTQDIAL 163 >gi|325121683|gb|ADY81206.1| ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic ligand binding protein [Acinetobacter calcoaceticus PHEA-2] Length = 340 Score = 36.6 bits (83), Expect = 6.0, Method: Compositional matrix adjust. Identities = 39/164 (23%), Positives = 69/164 (42%), Gaps = 7/164 (4%) Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 G+ Y G I+ K+GI+++ L G SI V+ G L LA HN+K + Sbjct: 110 GMMIMATDYSAGNDVII-AKEGINTIQDLKGKSIGVEKGLVDHLLLATALTDHNIKAN-- 166 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 V+ +++A + DISA+ + + + V II S P +I D Sbjct: 167 ---EVKLVNSATNQLPQVFNSPDISAIAVWQPVAGQALKAVAGSKIIYTSKDKPGLIY-D 222 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLG 278 T N+ T + + + + K + ++ T+PD + + Sbjct: 223 TLTVNMSHLTAHQEEWKKIIQVWDKTVKYINDPATHPDAVKIMA 266 >gi|145219393|ref|YP_001130102.1| extracellular solute-binding protein [Prosthecochloris vibrioformis DSM 265] gi|145205557|gb|ABP36600.1| amino acid ABC transporter substrate-binding protein, PAAT family [Chlorobium phaeovibrioides DSM 265] Length = 383 Score = 36.6 bits (83), Expect = 6.0, Method: Compositional matrix adjust. Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 3/68 (4%) Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 FA K NG+W+G +D RA++ I ++P++ + A+ +++DI + Sbjct: 66 FAMQKENGEWEGISIDLMRAIAK---KQDLGITFIPMSLPDMIEAVAVRRVDIAAAALTM 122 Query: 107 TLLREISL 114 T+ RE L Sbjct: 123 TVEREEQL 130 >gi|312796580|ref|YP_004029502.1| cystine-binding protein [Burkholderia rhizoxinica HKI 454] gi|312168355|emb|CBW75358.1| Cystine-binding protein [Burkholderia rhizoxinica HKI 454] Length = 280 Score = 36.6 bits (83), Expect = 6.0, Method: Compositional matrix adjust. Identities = 43/184 (23%), Positives = 76/184 (41%), Gaps = 12/184 (6%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 +K+ G L+ G+ F A+G+ G+DVD +A++ + P +++ Sbjct: 49 VKEHGTLRIGLEGTYPPFNFRDAHGELVGYDVDVAKAIALRLGVKP---EFITTEWSGII 105 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGAS 147 LQ+ + D++ T +R+ + + +P TY Q I K + S+ L G Sbjct: 106 AGLQAGKFDVIVNQVGITPVRQQTFDFS-QPYTYSVAQ-LIQRKDDSRQFKSLDNLKGKK 163 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 + V G+ +A +K +P E + ++ A R DA D L L T Sbjct: 164 LGVSLGSNYN-DMAKSVPGIEVKTYPGAPEYLRDLAAG----RIDAALNDRLMLAYLIKT 218 Query: 208 NDRP 211 N P Sbjct: 219 NALP 222 >gi|271963834|ref|YP_003338030.1| amino acid ABC transporter/signal transduction systems periplasmic component-like protein [Streptosporangium roseum DSM 43021] gi|270507009|gb|ACZ85287.1| ABC-type amino acid transport/signal transduction systems periplasmic component/domain-like protein [Streptosporangium roseum DSM 43021] Length = 370 Score = 36.6 bits (83), Expect = 6.0, Method: Compositional matrix adjust. Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 10/141 (7%) Query: 36 LKCGINTGLVG--FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE--RFLA 91 L+ G+ T G F E +KGFD+ +++ + P K+ +L + ++ R A Sbjct: 96 LRIGVKTDTPGIAFQEQTGRRAFKGFDIQVAYLIAADLGYRPDKVDFLGIETEDRARMQA 155 Query: 92 LQSK----QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSG 145 L + +D++ T R+ + F + Q + I+S+ QL G Sbjct: 156 LDANGRFVGVDLVVATFSVTRARQEDPSVGFSTPYLYTEQSVVTRSDYPGKITSLGQLEG 215 Query: 146 ASICVQAGTTTELTLADYFKA 166 +C +T+E LA +A Sbjct: 216 KKVCTLGTSTSETELARATRA 236 >gi|312870437|ref|ZP_07730557.1| ABC transporter, substrate-binding protein, family 3 [Lactobacillus oris PB013-T2-3] gi|311093994|gb|EFQ52318.1| ABC transporter, substrate-binding protein, family 3 [Lactobacillus oris PB013-T2-3] Length = 282 Score = 36.6 bits (83), Expect = 6.1, Method: Compositional matrix adjust. Identities = 35/133 (26%), Positives = 62/133 (46%), Gaps = 9/133 (6%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS-KIQYLPLNAKER 88 I++R + G++ V + NG G+DVD L+ A+F K+ + ++ + Sbjct: 39 IERRKKVVIGLDDSFVPMGFREKNGKLVGYDVD----LAKAVFKQYGIKVDFQTIDWSMK 94 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGAS 147 L++ ID+L RE + + RP Y D + ++ KK I +S ++G S Sbjct: 95 ETELKNGTIDLLWNGYSMNPSREKKVAFS-RP--YLDNRQVLVTKKSSHIDGLSGMAGKS 151 Query: 148 ICVQAGTTTELTL 160 + VQ G+T L Sbjct: 152 LGVQNGSTGAAVL 164 >gi|119387390|ref|YP_918424.1| extracellular solute-binding protein [Paracoccus denitrificans PD1222] gi|119377965|gb|ABL72728.1| amino acid ABC transporter substrate-binding protein, PAAT family [Paracoccus denitrificans PD1222] Length = 269 Score = 36.6 bits (83), Expect = 6.1, Method: Compositional matrix adjust. Identities = 36/173 (20%), Positives = 74/173 (42%), Gaps = 15/173 (8%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 L L I+ A + IK+RG + I+ + + + G DV+ + L+ Sbjct: 13 LVLGIVTGLVGPAAADVPAAIKERGKVLIAIDVSHPPYGMLDSQARETGSDVETAKLLAE 72 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 D ++ +P++ R +L S+++D++ + T R+ + I Y G Sbjct: 73 ---DMGVALEIVPVSGANRVPSLLSRKVDMVIASFSITEERK-------KVIDYSRPYGV 122 Query: 130 I-----MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 I + GI++ + L+G ++ V GTT ++ L+ K + + +E Sbjct: 123 IPVVISAPQDMGIAAPADLAGQALAVARGTTADIELSRIVKESGVNARIVRYE 175 >gi|327393261|dbj|BAK10683.1| glutamine-binding periplasmic protein precursor GlnH [Pantoea ananatis AJ13355] Length = 248 Score = 36.6 bits (83), Expect = 6.2, Method: Compositional matrix adjust. Identities = 53/199 (26%), Positives = 87/199 (43%), Gaps = 30/199 (15%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F VS+ L + F S S A+ +K+ L +T V F E K + GFDVD Sbjct: 5 FNVSVAALALAF--SLSATAA-----EKK--LIVATDTAFVPF-EFKQGDKYVGFDVDLW 54 Query: 65 RALSSAIFDDPSKIQYL--PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A++ + K+ Y P++ ALQ++ +D+ T+ E + F Sbjct: 55 DAIAKEL-----KLDYTLKPMDFSGIIPALQTRNVDLALAGI--TITDERKKAIEFSDGY 107 Query: 123 YFDGQ-GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y G + + + I S++ L+G + V++GT + DY K+H +K + + Sbjct: 108 YKSGLLVMVRNNENDIKSINDLNGKVVAVKSGTGS----VDYAKSH-IKTKDL--RQFPN 160 Query: 182 IDAAYR---AHRCDAYTGD 197 ID AY +R DA D Sbjct: 161 IDNAYMELGTNRADAVLHD 179 >gi|240172049|ref|ZP_04750708.1| extracellular solute-binding protein [Mycobacterium kansasii ATCC 12478] Length = 259 Score = 36.6 bits (83), Expect = 6.2, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 4/102 (3%) Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D ++ A+ + S I+Y + F AL S D ++ T T RE A Sbjct: 48 GFDIDLMTEIARALGTEVSFIRYEGADFNGIFGALNSGDYDCVAAGTTVTPEREKQ--AA 105 Query: 118 FRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTE 157 F GQ + + + S+ LSG +I VQ G T++ Sbjct: 106 FVAPYLISGQSLAVDTARLPNVRSIDDLSGLTIGVQQGNTSQ 147 >gi|76819835|ref|YP_336270.1| glutamate/aspartate periplasmic binding protein [Burkholderia pseudomallei 1710b] gi|167829459|ref|ZP_02460930.1| glutamate/aspartate periplasmic binding protein precursor [Burkholderia pseudomallei 9] gi|226196913|ref|ZP_03792491.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei Pakistan 9] gi|237509750|ref|ZP_04522465.1| glutamate/aspartate periplasmic-binding protein [Burkholderia pseudomallei MSHR346] gi|254265446|ref|ZP_04956311.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei 1710a] gi|76584308|gb|ABA53782.1| glutamate/aspartate periplasmic binding protein precursor [Burkholderia pseudomallei 1710b] gi|225930896|gb|EEH26905.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei Pakistan 9] gi|235001955|gb|EEP51379.1| glutamate/aspartate periplasmic-binding protein [Burkholderia pseudomallei MSHR346] gi|254216448|gb|EET05833.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei 1710a] Length = 240 Score = 36.6 bits (83), Expect = 6.2, Method: Compositional matrix adjust. Identities = 28/119 (23%), Positives = 52/119 (43%), Gaps = 14/119 (11%) Query: 61 VDFCRALSSAIFDDPSK--------IQYLPLNAKERFLALQSKQIDILSRNTDWTLLR-- 110 V F L+ A+ DD K I Y+P+ + R L + D+ +T T R Sbjct: 49 VGFSADLTDAVVDDVRKKLKMPGLQIAYIPVTGQNRNPLLVNDTYDLEGGSTTNTAARGQ 108 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 ++S ++ ++ G ++ K I + L+G ++ AG+T E + Y H++ Sbjct: 109 DVSFSISL----FYAGTRVLVKKASRIRGYADLAGKTVATAAGSTNENVIRKYAADHHL 163 >gi|217422247|ref|ZP_03453750.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 576] gi|217394478|gb|EEC34497.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 576] Length = 240 Score = 36.6 bits (83), Expect = 6.3, Method: Compositional matrix adjust. Identities = 28/119 (23%), Positives = 52/119 (43%), Gaps = 14/119 (11%) Query: 61 VDFCRALSSAIFDDPSK--------IQYLPLNAKERFLALQSKQIDILSRNTDWTLLR-- 110 V F L+ A+ DD K I Y+P+ + R L + D+ +T T R Sbjct: 49 VGFSADLTDAVVDDVRKKLKMPGLQIAYIPVTGQNRNPLLVNDTYDLEGGSTTNTAARGQ 108 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 ++S ++ ++ G ++ K I + L+G ++ AG+T E + Y H++ Sbjct: 109 DVSFSISL----FYAGTRVLVKKASRIRGYADLAGKTVATAAGSTNENVIRKYAADHHL 163 >gi|323356728|ref|YP_004223124.1| amino acid ABC transporter periplasmic protein [Microbacterium testaceum StLB037] gi|323273099|dbj|BAJ73244.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Microbacterium testaceum StLB037] Length = 300 Score = 36.6 bits (83), Expect = 6.3, Method: Compositional matrix adjust. Identities = 41/184 (22%), Positives = 76/184 (41%), Gaps = 9/184 (4%) Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 +G+ GFDV+ + +++++ D KI+Y + + R L + ID T R+ Sbjct: 86 SGERGGFDVEISQWIAASLGFDADKIEYKTIPSANREQELVNGNIDYYVGTYSITDKRKA 145 Query: 113 SLGLAFRPITYFDGQGFIM-HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 + A + GQG ++ + I + L+G +C G+T + D + + Sbjct: 146 QIDFAGPYL--ITGQGLLVAADNEDIKGPNDLAGKIVCSVTGSTPLQRIRDEYSPGDTVE 203 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + + +E++ RA DA T D + L P I D S+ + Sbjct: 204 YDTYTQCLEQL----RAGSVDAVTTDQAILAG--YVAQEPEAFKIAGDTFSEERYGVGLP 257 Query: 232 QGDT 235 +GDT Sbjct: 258 KGDT 261 >gi|224369136|ref|YP_002603300.1| GlnH2 [Desulfobacterium autotrophicum HRM2] gi|223691853|gb|ACN15136.1| GlnH2 [Desulfobacterium autotrophicum HRM2] Length = 250 Score = 36.6 bits (83), Expect = 6.3, Method: Compositional matrix adjust. Identities = 38/148 (25%), Positives = 62/148 (41%), Gaps = 15/148 (10%) Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 A G + GFD+D RA+ I K++ + + LQ+K+ID++ + R Sbjct: 41 ATGAFVGFDMDLVRAIGDKI---GKKVKIVDMGFDTLIAGLQNKKIDVVIAAMQASDERR 97 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKG---ISSVSQLSGASICVQAGTTTELTLADYF---- 164 + + ITY D + ++ K I SV ++G + Q GT E + D Sbjct: 98 KKVDFS---ITYHDIKDALLVKADSDIQIKSVYDIAGYKVASQTGTIQEKWIQDNLVKTG 154 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCD 192 K Y +ERV+ +A R D Sbjct: 155 KLAAENYFS--YERVDNAAMDVKAGRVD 180 >gi|330977202|gb|EGH77159.1| cystine transporter subunit [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 265 Score = 36.6 bits (83), Expect = 6.4, Method: Compositional matrix adjust. Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 11/211 (5%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L IK G L G+ F+ V +G GF+V+F AL+ + +KIQ P Sbjct: 33 LQKIKDSGTLNVGLEGTYPPFSFVDESGKLTGFEVEFSEALAKEL-GVKAKIQ--PSKWD 89 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSG 145 AL SK++D++ + R+ + P T Q ++ K + I S L+G Sbjct: 90 GILAALDSKRLDVVINQVTISDERKKKYDFS-EPYTVSGIQALVLKKNEDAIKSAKDLTG 148 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 + V GT E L +K + +++++ R DA + L AL+ Sbjct: 149 KKVGVGLGTNYEEWLKANVPGAIVKTYDDDPSKIQDLSVG----RIDAIL--VDRLAALE 202 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + ++ V D S+ A+ +G+ E Sbjct: 203 MAAKTKNKLVPAGDAFSRQESGIALRKGEPE 233 >gi|288573449|ref|ZP_06391806.1| methyl-accepting chemotaxis sensory transducer [Dethiosulfovibrio peptidovorans DSM 11002] gi|288569190|gb|EFC90747.1| methyl-accepting chemotaxis sensory transducer [Dethiosulfovibrio peptidovorans DSM 11002] Length = 579 Score = 36.6 bits (83), Expect = 6.4, Method: Compositional matrix adjust. Identities = 38/148 (25%), Positives = 61/148 (41%), Gaps = 14/148 (9%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 L + + SIL D G LK + G +G KGFDVD RA++ I Sbjct: 336 LPLDGYPSVRSILDD----GRLKVAMLDTDYGLFHFDLHGSPKGFDVDLSRAIAEKI-GV 390 Query: 75 PSKIQYLPLNAKERFL-------ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 P +I +P E L K + I++ T+ R + F P+++ GQ Sbjct: 391 PLEIVPVPQGNGEPGTRSGILNQGLWGKDVHIMASAVTKTVKR--GEKVLFSPLSFASGQ 448 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTT 155 + +G++ + L G ++ V G T Sbjct: 449 CAVSTSDRGLTHLRDLRGKTLAVHGGLT 476 >gi|82880399|gb|ABB92745.1| surface displayed FLIPE 600n sensor protein [synthetic construct] Length = 865 Score = 36.6 bits (83), Expect = 6.4, Method: Compositional matrix adjust. Identities = 31/138 (22%), Positives = 57/138 (41%), Gaps = 6/138 (4%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQYLP 82 L I K G + G V F+ G+ D+ A+ A+ + P +++ +P Sbjct: 289 LDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVKLIP 348 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R LQ+ D +T + R+ AF + G + K I + Sbjct: 349 ITSQNRIPLLQNGTFDFECGSTTNNVERQKQA--AFSDTIFVVGTRLLTKKGGDIKDFAN 406 Query: 143 LSGASICVQAGTTTELTL 160 L ++ V +GTT+E+ L Sbjct: 407 LKDKAVVVTSGTTSEVLL 424 >gi|193063399|ref|ZP_03044489.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli E22] gi|194429723|ref|ZP_03062239.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli B171] gi|260842881|ref|YP_003220659.1| periplasmic-binding component GltI [Escherichia coli O103:H2 str. 12009] gi|192930983|gb|EDV83587.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli E22] gi|194412204|gb|EDX28510.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli B171] gi|257758028|dbj|BAI29525.1| periplasmic-binding component GltI [Escherichia coli O103:H2 str. 12009] gi|323158891|gb|EFZ44902.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli E128010] Length = 302 Score = 36.6 bits (83), Expect = 6.4, Method: Compositional matrix adjust. Identities = 34/155 (21%), Positives = 61/155 (39%), Gaps = 6/155 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQ 79 S L I K G + G V F+ G+ D+ A+ A+ + P +++ Sbjct: 30 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ AF + G + K I Sbjct: 90 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQA--AFSDTIFVVGTRLLTKKGGDIKD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + L ++ V +GTT+E+ L + M I Sbjct: 148 FADLKDKAVVVTSGTTSEVLLNKLNEEQKMNMRII 182 >gi|153011680|ref|YP_001372894.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC 49188] gi|151563568|gb|ABS17065.1| extracellular solute-binding protein family 3 [Ochrobactrum anthropi ATCC 49188] Length = 264 Score = 36.6 bits (83), Expect = 6.4, Method: Compositional matrix adjust. Identities = 38/153 (24%), Positives = 66/153 (43%), Gaps = 13/153 (8%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE---RFLAL 92 ++ G F + +G KGFD+D A+ + D +A E AL Sbjct: 27 IRMGAEGAYAPFNYLDPSGQLKGFDIDVGNAICEKLKAD------CVWSANEWSGIIPAL 80 Query: 93 QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS--GASICV 150 QSK+ DI++ + T R ++F Y++ F+ K+ G+ V+ S G I Sbjct: 81 QSKKFDIMASSMAITESRMQQ--VSFSDPYYYNTMRFVALKELGLKDVTPESAKGKVIGT 138 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 Q G+ L +F + +K +P + E +I+ Sbjct: 139 QTGSIAVDALQRFFPDNEVKLYPTLEEAFLDIE 171 >gi|330899980|gb|EGH31399.1| cystine transporter subunit [Pseudomonas syringae pv. japonica str. M301072PT] Length = 265 Score = 36.2 bits (82), Expect = 6.6, Method: Compositional matrix adjust. Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 11/211 (5%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L IK G L G+ F+ V +G GF+V+F AL+ + +KIQ P Sbjct: 33 LQKIKDSGTLNVGLEGTYPPFSFVDESGKLTGFEVEFSEALAKEL-GVKAKIQ--PSKWD 89 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSG 145 AL SK++D++ + R+ + P T Q ++ K + I S L+G Sbjct: 90 GILAALDSKRLDVVINQVTISDERKKKYDFS-EPYTVSGIQALVLKKNEDAIKSAKDLTG 148 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 + V GT E L +K + +++++ R DA + L AL+ Sbjct: 149 KKVGVGLGTNYEEWLKANVPGAIVKTYDDDPSKIQDLSVG----RIDAIL--VDRLAALE 202 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + ++ V D S+ A+ +G+ E Sbjct: 203 MAAKTKNKLVPAGDAFSRQESGIALRKGEPE 233 >gi|257056747|ref|YP_003134579.1| amino acid-binding protein [Saccharomonospora viridis DSM 43017] gi|256586619|gb|ACU97752.1| amino acid-binding protein [Saccharomonospora viridis DSM 43017] Length = 304 Score = 36.2 bits (82), Expect = 6.7, Method: Compositional matrix adjust. Identities = 32/129 (24%), Positives = 63/129 (48%), Gaps = 6/129 (4%) Query: 30 IKKRGFLKCGINTGL--VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 +KK G + G+ +G+ + +G++ GFDV+ R +S+ + DP KI+Y + + Sbjct: 61 MKKTGHVVVGVKDDQPNLGYKD-PTSGEYSGFDVEIARLISAKLGFDPKKIEYKAVPSAG 119 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGA 146 R A+ + D+ +T+ + ++F + GQG ++ K + I L G Sbjct: 120 REQAIING--DVHYYVGTYTINDKRKQQISFAGPYFVAGQGLLVAKDNEDIKGKDDLKGK 177 Query: 147 SICVQAGTT 155 +C +G+T Sbjct: 178 KVCSVSGST 186 >gi|289674587|ref|ZP_06495477.1| cystine transporter subunit [Pseudomonas syringae pv. syringae FF5] gi|330938696|gb|EGH42254.1| cystine transporter subunit [Pseudomonas syringae pv. pisi str. 1704B] Length = 265 Score = 36.2 bits (82), Expect = 6.7, Method: Compositional matrix adjust. Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 11/211 (5%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L IK G L G+ F+ V +G GF+V+F AL+ + +KIQ P Sbjct: 33 LQKIKDSGTLNVGLEGTYPPFSFVDESGKLTGFEVEFSEALAKEL-GVKAKIQ--PSKWD 89 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSG 145 AL SK++D++ + R+ + P T Q ++ K + I S L+G Sbjct: 90 GILAALDSKRLDVVINQVTISDERKKKYDFS-EPYTVSGIQALVLKKNEDAIKSAKDLTG 148 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 + V GT E L +K + +++++ R DA + L AL+ Sbjct: 149 KKVGVGLGTNYEEWLKANVPGAIVKTYDDDPSKIQDLSVG----RIDAIL--VDRLAALE 202 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + ++ V D S+ A+ +G+ E Sbjct: 203 MAAKTKNKLVPAGDAFSRQESGIALRKGEPE 233 >gi|209551039|ref|YP_002282956.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209536795|gb|ACI56730.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 274 Score = 36.2 bits (82), Expect = 6.7, Method: Compositional matrix adjust. Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 3/80 (3%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + +A+ + +IK +G L GI + V +G GFD D + + K+++ Sbjct: 25 TASAATVEEIKAKGTLVVGIQGDNAPWGFVNTSGKQDGFDADIATLFAKEL---GVKVEF 81 Query: 81 LPLNAKERFLALQSKQIDIL 100 PL R AL + ++DIL Sbjct: 82 QPLAVANRIPALTTGKVDIL 101 >gi|186476914|ref|YP_001858384.1| cationic amino acid ABC transporter periplasmic binding protein [Burkholderia phymatum STM815] gi|184193373|gb|ACC71338.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia phymatum STM815] Length = 258 Score = 36.2 bits (82), Expect = 6.8, Method: Compositional matrix adjust. Identities = 35/164 (21%), Positives = 69/164 (42%), Gaps = 10/164 (6%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 ++ G++ F + NG GFDVD +AL + + K ++ + AL+ K Sbjct: 25 VRIGVDASYPPFESIAPNGHMVGFDVDLTKALCAKM---NVKCVWIAQDLDGIIPALKGK 81 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAG 153 + D++ + T R + + + FD ++ KK + + L G + V+ G Sbjct: 82 KYDMIVSSLTVTDKRREQIDFSDK---LFDAPARMIAKKGSPLLPTAESLKGKHVGVEQG 138 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 +T E Y++ + P ++ +++ A R DA D Sbjct: 139 STQEAYAKAYWEPRGVTVVP--YQNQDQVYADLATGRLDAALQD 180 >gi|297156741|gb|ADI06453.1| putative glutamate ABC transporter substrate-binding protein [Streptomyces bingchenggensis BCW-1] Length = 290 Score = 36.2 bits (82), Expect = 6.8, Method: Compositional matrix adjust. Identities = 30/136 (22%), Positives = 62/136 (45%), Gaps = 7/136 (5%) Query: 23 NASILGDIKKRGFLKCGI--NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 ++S L +KRG L G + +GF + G GFD++ + +++ + +I++ Sbjct: 41 DSSTLKAAQKRGKLIIGAKADQPYLGFEDT--TGKRSGFDIEIAKMVAADLGFSEDQIEF 98 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM-HKKKGISS 139 +++ R ++ Q+D +T+ E + F Y G ++ H +KGI+ Sbjct: 99 KTVDSNVRETSISKGQVDYYVGT--YTINDERKKQVGFAGPYYVAGADLLVRHDEKGITG 156 Query: 140 VSQLSGASICVQAGTT 155 + G +C G+T Sbjct: 157 ADSVKGKKVCSIVGST 172 >gi|291519630|emb|CBK74851.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [Butyrivibrio fibrisolvens 16/4] Length = 262 Score = 36.2 bits (82), Expect = 6.8, Method: Compositional matrix adjust. Identities = 40/148 (27%), Positives = 56/148 (37%), Gaps = 9/148 (6%) Query: 37 KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96 K +T F NGD+ G D+D A++ D K + L A Q+ Q Sbjct: 41 KIATDTSFKPFEYTDNNGDFVGIDMDILAAVAE---DQGFKYEVQVLGWDASIAACQAGQ 97 Query: 97 IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT 156 D L T R+ S G F Y Q + I LSG S+ V+ GT + Sbjct: 98 ADALMAGASITDERKGS-GWIFSDGYYDANQSMAVESSSDIKGFEDLSGKSVAVKTGTMS 156 Query: 157 ----ELTLADY-FKAHNMKYHPIVFERV 179 E ADY F + P +++ V Sbjct: 157 ASYAESLSADYDFTVTYFEDSPTMYQAV 184 >gi|15891686|ref|NP_357358.1| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|15160140|gb|AAK90143.1| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 300 Score = 36.2 bits (82), Expect = 6.8, Method: Compositional matrix adjust. Identities = 40/221 (18%), Positives = 90/221 (40%), Gaps = 7/221 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS----KIQYLP 82 L I + G ++ G + F+ + + G+ ++ C ++ +I + K++++ Sbjct: 30 LETIARTGTIRLGFADRNIPFSYLGTGPEPIGYSIELCLRVADSIKRKLALPELKVEFVK 89 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 R + L ID+ + T R ++ ++ + G ++ K G+++V+ Sbjct: 90 RTPSNRIMLLNDGTIDMECVASTNTEERRKAVWFSYS--HFITGTRYVALKSSGLNTVAD 147 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+G ++ V GT L + M + + E +R A+ D L Sbjct: 148 LAGRTVVVTTGTINISQLNVLNRKLGMNIAVLQNDSTEGSFDMVTENRASAFVMDDILLR 207 Query: 203 ALKLTNDRPSEHVILPDIIS-KSPLAPAIIQGDTEWYNIVS 242 + RP ++VI + ++ P + GDT + + V+ Sbjct: 208 SFIAETGRPEDYVISNEYLAPPQPYGLMLRHGDTGFRDAVN 248 >gi|296162053|ref|ZP_06844851.1| extracellular solute-binding protein family 3 [Burkholderia sp. Ch1-1] gi|295887674|gb|EFG67494.1| extracellular solute-binding protein family 3 [Burkholderia sp. Ch1-1] Length = 255 Score = 36.2 bits (82), Expect = 6.9, Method: Compositional matrix adjust. Identities = 43/175 (24%), Positives = 71/175 (40%), Gaps = 9/175 (5%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 L+ GI+ +G +KGFDVD + I ++ Q++ L ALQ++ Sbjct: 26 LRLGIDPTYPPMDSKAPDGSFKGFDVDLGNEICKRIH---ARCQWVELEFSGMIPALQAR 82 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 +ID + + T RE + L + F + ++ L G I VQ+GT Sbjct: 83 KIDAILSSMAITEKREQQI-LFSSKLFQFKSRLIARQGSALAGGLNALPGKQIGVQSGTQ 141 Query: 156 TE-LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD-AYTGDISALYALKLTN 208 E L ++ + H + ++ EE+ A R D A G + A Y T Sbjct: 142 FEGYALKNW---APLGVHVVAYKSQEEVFADLENGRLDGALLGSVEADYGFLRTQ 193 >gi|82776400|ref|YP_402749.1| cystine transporter subunit [Shigella dysenteriae Sd197] gi|81240548|gb|ABB61258.1| putative periplasmic binding transport protein [Shigella dysenteriae Sd197] Length = 266 Score = 36.2 bits (82), Expect = 7.0, Method: Compositional matrix adjust. Identities = 49/241 (20%), Positives = 103/241 (42%), Gaps = 15/241 (6%) Query: 6 FVSILCLIILFFTSFST--NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 + ++ + ++ S + + +L +K+RG L G+ F+ +G GF+V+F Sbjct: 11 LIGVMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEF 70 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 + L+ + + S P +L SK+ID++ + R+ + P T Sbjct: 71 AQQLAKHLGVEAS---LKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDFS-TPYTI 126 Query: 124 FDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Q + +G I + + L G + V GT E L + +++ + + +++ Sbjct: 127 SGIQALVKKGNEGTIKTAADLKGKKVGVGLGTNYEEWLRQNVQGVDVRTYDDDPTKYQDL 186 Query: 183 DAAYRAHRCDAYTGD-ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 R R DA D ++AL +K TND + + ++ S+ A+ +G+ + V Sbjct: 187 ----RVGRIDAILVDRLAALDLVKKTNDTLA---VTGEVFSRQESGVALRKGNEDLLKAV 239 Query: 242 S 242 + Sbjct: 240 N 240 >gi|226364611|ref|YP_002782393.1| ABC transporter substrate-binding protein [Rhodococcus opacus B4] gi|226243100|dbj|BAH53448.1| putative ABC transporter substrate-binding protein [Rhodococcus opacus B4] Length = 237 Score = 36.2 bits (82), Expect = 7.1, Method: Compositional matrix adjust. Identities = 47/190 (24%), Positives = 76/190 (40%), Gaps = 10/190 (5%) Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 E + G+ GFDV+F RA++ + S + Y + F AL + D ++ T T+ Sbjct: 20 EFRDGGEPAGFDVEFTRAVARELGLAWSLVPYRGTDFNGIFDALADGEFDCIASGT--TV 77 Query: 109 LREISLGLAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 E F GQ + + G+ V L G ++ VQ G T++ + D A Sbjct: 78 TPERRARADFCAPYLVSGQSLAVDTARHPGVRGVDDLRGLTVGVQHGNTSQ-PIVDRLVA 136 Query: 167 HNM--KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 ++R+ + + CDA L L DRP V+ IS+ Sbjct: 137 QGRAGAIRVYAYDRIGQALDDLSSGGCDAVMKLAPVLT--WLVRDRPHVEVVERG-ISRE 193 Query: 225 PLAPAIIQGD 234 +A A+ GD Sbjct: 194 EIAVAVRTGD 203 >gi|82880397|gb|ABB92744.1| glutamate sensor protein FLIPE-600n [synthetic construct] Length = 764 Score = 36.2 bits (82), Expect = 7.3, Method: Compositional matrix adjust. Identities = 31/138 (22%), Positives = 57/138 (41%), Gaps = 6/138 (4%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQYLP 82 L I K G + G V F+ G+ D+ A+ A+ + P +++ +P Sbjct: 250 LDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVKLIP 309 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R LQ+ D +T + R+ AF + G + K I + Sbjct: 310 ITSQNRIPLLQNGTFDFECGSTTNNVERQKQA--AFSDTIFVVGTRLLTKKGGDIKDFAN 367 Query: 143 LSGASICVQAGTTTELTL 160 L ++ V +GTT+E+ L Sbjct: 368 LKDKAVVVTSGTTSEVLL 385 >gi|152969252|ref|YP_001334361.1| glutamate and aspartate transporter subunit [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150954101|gb|ABR76131.1| glutamate/aspartate periplasmic binding protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 318 Score = 36.2 bits (82), Expect = 7.4, Method: Compositional matrix adjust. Identities = 33/140 (23%), Positives = 58/140 (41%), Gaps = 6/140 (4%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQY 80 + L I K G + G V F+ G+ D+ A+ AI + P +++ Sbjct: 47 NTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVDAIKKKLNKPDLQVKL 106 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +P+ ++ R LQ+ D +T L R+ AF + G ++ K I Sbjct: 107 IPVTSQNRIPLLQNGTFDFECGSTTNNLERQKQA--AFSDTIFVVGTRLLVKKGGPIKDF 164 Query: 141 SQLSGASICVQAGTTTELTL 160 L ++ V +GTT+E+ L Sbjct: 165 PDLKDKAVVVTSGTTSEILL 184 >gi|197302608|ref|ZP_03167663.1| hypothetical protein RUMLAC_01337 [Ruminococcus lactaris ATCC 29176] gi|197298506|gb|EDY33051.1| hypothetical protein RUMLAC_01337 [Ruminococcus lactaris ATCC 29176] Length = 273 Score = 36.2 bits (82), Expect = 7.5, Method: Compositional matrix adjust. Identities = 34/147 (23%), Positives = 61/147 (41%), Gaps = 12/147 (8%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 +K +G L GI T NG+W GFD D A + + D ++++ ++ + Sbjct: 45 VKDKGTLVVGI-TDFEPMDYKDDNGNWIGFDADMASAFAEELGVD---VEFVEIDWDNKV 100 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGAS 147 L L K ID + TL E++ + + Q ++ +K L S Sbjct: 101 LELDGKSIDCVWNG--MTLTDEVTSSMECTDAYLNNAQVVVVPAEKADKYQDTDSLKDLS 158 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPI 174 V+AG+ E +++ N+ Y P+ Sbjct: 159 FAVEAGSAGEKQVSNL----NLNYTPV 181 >gi|260219978|emb|CBA27056.1| hypothetical protein Csp_A00370 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 282 Score = 36.2 bits (82), Expect = 7.6, Method: Compositional matrix adjust. Identities = 48/249 (19%), Positives = 92/249 (36%), Gaps = 38/249 (15%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS----KIQYL 81 +L + G L + F+ V A+ G+ V+ C L+ A+ ++++L Sbjct: 12 VLERVSSGGKLVIAHRESSIPFSYVDADKKPVGYAVELCLKLADAVRKKTGAKNMQVEFL 71 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 + R + + D+ +T T E +AF + G ++ I + Sbjct: 72 QVTPANRIAMVAEGKADLECGST--TNNAERRQKVAFTIPHFITGARMLVRADSKIERIE 129 Query: 142 QLSGASICVQAGTT----------------TELTLADYFKAHNMKYHPIVFERVEEIDAA 185 L G + GTT T L D+ KA +M VE+ +A Sbjct: 130 DLEGKKLVSTKGTTPLKAAEQANRERLLRITILEAPDHAKAVDM---------VEKSEA- 179 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 DA+ D LY L +P ++ ++ PLA + + D E+ ++ Sbjct: 180 ------DAFVMDDVLLYGLASNRPKPESLRVVGKFLTTEPLAIMLPKDDPEFKKLIDEEM 233 Query: 246 YAMVTAEEL 254 ++ ++E+ Sbjct: 234 RRLIVSKEI 242 >gi|197284576|ref|YP_002150448.1| arginine ABC transporter substrate-binding protein [Proteus mirabilis HI4320] gi|227356758|ref|ZP_03841143.1| arginine ABC superfamily ATP binding cassette transporter, substrate-binding protein [Proteus mirabilis ATCC 29906] gi|194682063|emb|CAR41589.1| arginine ABC transporter, substrate-binding protein [Proteus mirabilis HI4320] gi|227163048|gb|EEI47983.1| arginine ABC superfamily ATP binding cassette transporter, substrate-binding protein [Proteus mirabilis ATCC 29906] Length = 244 Score = 36.2 bits (82), Expect = 7.7, Method: Compositional matrix adjust. Identities = 32/114 (28%), Positives = 46/114 (40%), Gaps = 16/114 (14%) Query: 47 FAEVKANGDWKGFDVDFCRALSSAI-----FDDPSKIQYLPLNAKERFLALQSKQIDILS 101 F + AN GFDVD A+ I F + S +P +L+ ++ D L Sbjct: 36 FEMIDANNQIVGFDVDLANAMCEKINAECTFTNQSFDSLIP--------SLKFRRFDALM 87 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 D T R+ + +Y+D + IS V+ L G I VQ GTT Sbjct: 88 AGIDITPERQKQVDFT---DSYYDNSAVFITVTGKISDVASLKGKQIGVQNGTT 138 >gi|116491635|ref|YP_811179.1| amino acid ABC transporter periplasmic protein [Oenococcus oeni PSU-1] gi|290891244|ref|ZP_06554306.1| hypothetical protein AWRIB429_1696 [Oenococcus oeni AWRIB429] gi|116092360|gb|ABJ57514.1| amino acid ABC transporter substrate-binding protein, PAAT family [Oenococcus oeni PSU-1] gi|290479208|gb|EFD87870.1| hypothetical protein AWRIB429_1696 [Oenococcus oeni AWRIB429] Length = 282 Score = 36.2 bits (82), Expect = 7.7, Method: Compositional matrix adjust. Identities = 37/158 (23%), Positives = 66/158 (41%), Gaps = 8/158 (5%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 IKK +K G++ + +G GFDVD A + K+++ P+N + Sbjct: 45 IKKSKEIKIGLDDTFIPMGFRNKSGKLIGFDVDLANATFKKL---GIKVEWEPINWSTKE 101 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG-QGFIMHKKKGISSVSQLSGASI 148 L QID + + R+ + + I Y G Q + K I+S + + G ++ Sbjct: 102 QLLNDGQIDAIWNGYTISAARKKKVAFS---IPYKKGTQVLVTLSKDKINSFADMKGKTL 158 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 +Q G+T + Y K KY ++ + D A+ Sbjct: 159 GLQNGSTAQTQFQQY-KNLLKKYVKGTPQKYDTFDKAF 195 >gi|302186282|ref|ZP_07262955.1| cystine transporter subunit [Pseudomonas syringae pv. syringae 642] Length = 265 Score = 36.2 bits (82), Expect = 7.7, Method: Compositional matrix adjust. Identities = 50/211 (23%), Positives = 88/211 (41%), Gaps = 11/211 (5%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L IK+ G L G+ F+ V +G GF+V+F AL+ + +KIQ P Sbjct: 33 LQKIKESGTLNVGLEGTYPPFSFVDESGKLTGFEVEFSEALAKEL-GVKAKIQ--PSKWD 89 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSG 145 AL SK++D++ + R+ + P T Q ++ K + I + L+G Sbjct: 90 GILAALDSKRLDVVINQVTISDERKKKYDFS-EPYTVSGIQALVLKKNEDAIKTAKDLTG 148 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 + V GT E L +K + +++++ R DA + L AL+ Sbjct: 149 KKVGVGLGTNYEEWLKANVPGAIVKTYDDDPSKIQDLSVG----RIDAIL--VDRLAALE 202 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + ++ V D S+ A+ +G+ E Sbjct: 203 MAAKTKNKLVPAGDAFSRQESGIALRKGEPE 233 >gi|316934164|ref|YP_004109146.1| family 3 extracellular solute-binding protein [Rhodopseudomonas palustris DX-1] gi|315601878|gb|ADU44413.1| extracellular solute-binding protein family 3 [Rhodopseudomonas palustris DX-1] Length = 318 Score = 36.2 bits (82), Expect = 7.7, Method: Compositional matrix adjust. Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 2/73 (2%) Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 G + K GI+S+ L G + + G+T E+ + D A M I RV D A Sbjct: 109 GMAVVAGKDSGIASIKDLKGKKVAIWPGSTQEVVILDRLAAEGMTIKDIQSVRVSFSDMA 168 Query: 186 YRAHR--CDAYTG 196 R DAY G Sbjct: 169 PALARGDIDAYVG 181 >gi|256844635|ref|ZP_05550120.1| glutamine ABC transporter [Lactobacillus crispatus 125-2-CHN] gi|256613176|gb|EEU18380.1| glutamine ABC transporter [Lactobacillus crispatus 125-2-CHN] Length = 272 Score = 36.2 bits (82), Expect = 7.7, Method: Compositional matrix adjust. Identities = 44/204 (21%), Positives = 82/204 (40%), Gaps = 15/204 (7%) Query: 1 MYKDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGI--NTGLVGFAEVKAN 53 M K F + I+ +++LF S ++ +K + G+ +T L G +K Sbjct: 1 MRKKFLL-IISIVVLFALPLSGCKQNKKQNVYQAVKTSKTINWGVKADTPLFGSINIKT- 58 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G GF++D AL+ + +K ++ A + L++ +D + T+ E Sbjct: 59 GKLNGFEIDLANALTHEMLGKNAKANFITTTANTKIQLLKNTNVDAVI--AAMTITPERK 116 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F + GQ ++ I + L+ + V GTT AD K Sbjct: 117 KQVEFSHPYFPAGQSIMVADSSAIKNAKNLNNKKVLVVKGTTA----ADAIHQVAPKAEI 172 Query: 174 IVFERVEEIDAAYRAHRCDAYTGD 197 + F+ + AA +A + DA+ D Sbjct: 173 LQFDDYGQAFAALKAGQGDAFVTD 196 >gi|218689913|ref|YP_002398125.1| cystine transporter subunit [Escherichia coli ED1a] gi|218695527|ref|YP_002403194.1| cystine transporter subunit [Escherichia coli 55989] gi|260855900|ref|YP_003229791.1| putative periplasmic binding transport protein FliY [Escherichia coli O26:H11 str. 11368] gi|300822308|ref|ZP_07102449.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 119-7] gi|331683472|ref|ZP_08384073.1| cystine ABC transporter, cystine-binding periplasmic protein [Escherichia coli H299] gi|218352259|emb|CAU98015.1| cystine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli 55989] gi|218427477|emb|CAR08373.2| cystine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli ED1a] gi|257754549|dbj|BAI26051.1| putative periplasmic binding transport protein FliY [Escherichia coli O26:H11 str. 11368] gi|300525191|gb|EFK46260.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 119-7] gi|309702215|emb|CBJ01531.1| cystine ABC transporter, substrate-binding protein (sulfate starvation-induced protein 7) [Escherichia coli ETEC H10407] gi|323152747|gb|EFZ39019.1| cystine-binding periplasmic protein [Escherichia coli EPECa14] gi|323937195|gb|EGB33475.1| bacterial extracellular solute-binding protein 3 [Escherichia coli E1520] gi|331079687|gb|EGI50884.1| cystine ABC transporter, cystine-binding periplasmic protein [Escherichia coli H299] Length = 266 Score = 36.2 bits (82), Expect = 7.7, Method: Compositional matrix adjust. Identities = 46/208 (22%), Positives = 90/208 (43%), Gaps = 12/208 (5%) Query: 6 FVSILCLIILFFTSFST--NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 +S++ + ++ S + + +L +K+RG L G+ F+ +G GF+V+F Sbjct: 11 LMSVMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEF 70 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 + L+ + + S P +L SK+ID++ + R+ + P T Sbjct: 71 AQQLAKHLGVEAS---LKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDFS-TPYTI 126 Query: 124 FDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Q + +G I + + L G + V GT E L + +++ + + +++ Sbjct: 127 SGIQALVKKGNEGTIKTAADLKGKKVGVGLGTNYEEWLRQNVQGVDVRTYDDDPTKYQDL 186 Query: 183 DAAYRAHRCDAYTGD-ISALYALKLTND 209 R R DA D ++AL +K TND Sbjct: 187 ----RVGRIDAILVDRLAALDLVKKTND 210 >gi|271963751|ref|YP_003337947.1| glutamine ABC transporter glutamine-binding protein [Streptosporangium roseum DSM 43021] gi|270506926|gb|ACZ85204.1| glutamine ABC transporter (glutamine-binding protein) [Streptosporangium roseum DSM 43021] Length = 269 Score = 36.2 bits (82), Expect = 7.9, Method: Compositional matrix adjust. Identities = 30/127 (23%), Positives = 55/127 (43%), Gaps = 3/127 (2%) Query: 39 GINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQID 98 GI G + + +G +KGFDVD + ++ + K+++ + R +Q Q++ Sbjct: 33 GIKFDQPGLGQKQPDGSFKGFDVDVAKYVAKELGYTGDKVEFKEAISANRESFIQQGQVN 92 Query: 99 ILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTE 157 I+ T R+ +G A + GQ + I+SV L +C G+++ Sbjct: 93 IVIATYSITDDRKKKIGFAGPYLVT--GQDILTRADDTTINSVDDLKDKKVCGAQGSSSP 150 Query: 158 LTLADYF 164 L D F Sbjct: 151 KRLVDKF 157 >gi|258541040|ref|YP_003175539.1| glutamine ABC transporter substrate-binding protein [Lactobacillus rhamnosus Lc 705] gi|257152716|emb|CAR91688.1| ABC transporter, glutamine-binding periplasmic protein [Lactobacillus rhamnosus Lc 705] Length = 484 Score = 36.2 bits (82), Expect = 7.9, Method: Compositional matrix adjust. Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 11/122 (9%) Query: 52 ANGDWK--GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 AN D K G D+D +A++ ++ K++ PL AL++KQID + T Sbjct: 47 ANQDNKYVGIDLDLIKAIAK---EEGFKVEIKPLGFNAAVQALEAKQIDGVIAGMSITPE 103 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 R+ L P Y G + KK I S+ L G + ++ GT + ADY + Sbjct: 104 RKQKF-LMSDPY-YKSGVVMAVAKKSKIKSLKDLRGKRVAIKTGTDS----ADYANSIKQ 157 Query: 170 KY 171 KY Sbjct: 158 KY 159 >gi|258509857|ref|YP_003172608.1| ABC transporter glutamine-binding periplasmic protein [Lactobacillus rhamnosus GG] gi|257149784|emb|CAR88757.1| ABC transporter, glutamine-binding periplasmic protein [Lactobacillus rhamnosus GG] Length = 484 Score = 36.2 bits (82), Expect = 7.9, Method: Compositional matrix adjust. Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 11/122 (9%) Query: 52 ANGDWK--GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 AN D K G D+D +A++ ++ K++ PL AL++KQID + T Sbjct: 47 ANQDNKYVGIDLDLIKAIAK---EEGFKVEIKPLGFNAAVQALEAKQIDGVIAGMSITPE 103 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 R+ L P Y G + KK I S+ L G + ++ GT + ADY + Sbjct: 104 RKQKF-LMSDPY-YKSGVVMAVAKKSTIKSLKDLRGKRVAIKTGTDS----ADYANSIKQ 157 Query: 170 KY 171 KY Sbjct: 158 KY 159 >gi|291617814|ref|YP_003520556.1| FliY [Pantoea ananatis LMG 20103] gi|291152844|gb|ADD77428.1| FliY [Pantoea ananatis LMG 20103] gi|327394231|dbj|BAK11653.1| cystine-binding periplasmic protein precursor FliY [Pantoea ananatis AJ13355] Length = 288 Score = 36.2 bits (82), Expect = 8.1, Method: Compositional matrix adjust. Identities = 47/202 (23%), Positives = 82/202 (40%), Gaps = 10/202 (4%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 + L+ F +L +K +G L+ G+ F+ G GF+V+F + L+ Sbjct: 39 VALVAGFSVKTFAADDLLAQVKSKGELRVGLEGTYPPFSFQDEKGKLTGFEVEFAQDLAK 98 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 + K P AL SK+ID++ + R+ + P T Q Sbjct: 99 HM---GVKAVLKPTKWDGMLAALDSKRIDVVINQVTISDERKKKYDFS-TPYTISGVQAL 154 Query: 130 IMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 + K G I+ L+G + V GT E L K +++ + + +++ R+ Sbjct: 155 TLKKNAGSITKPEDLAGKKVGVGLGTNYEQWLRANVKGVDIRTYDDDPTKYQDL----RS 210 Query: 189 HRCDAYTGD-ISALYALKLTND 209 R DA D ++AL +K T D Sbjct: 211 GRVDAILVDRLAALDLVKKTGD 232 >gi|256851586|ref|ZP_05556975.1| amino acid ABC transporter substrate-binding component [Lactobacillus jensenii 27-2-CHN] gi|260661010|ref|ZP_05861925.1| amino acid ABC transporter substrate-binding component [Lactobacillus jensenii 115-3-CHN] gi|282932374|ref|ZP_06337805.1| cystine-binding periplasmic protein [Lactobacillus jensenii 208-1] gi|297206404|ref|ZP_06923799.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus jensenii JV-V16] gi|256616648|gb|EEU21836.1| amino acid ABC transporter substrate-binding component [Lactobacillus jensenii 27-2-CHN] gi|260548732|gb|EEX24707.1| amino acid ABC transporter substrate-binding component [Lactobacillus jensenii 115-3-CHN] gi|281303488|gb|EFA95659.1| cystine-binding periplasmic protein [Lactobacillus jensenii 208-1] gi|297149530|gb|EFH29828.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus jensenii JV-V16] Length = 263 Score = 36.2 bits (82), Expect = 8.1, Method: Compositional matrix adjust. Identities = 36/146 (24%), Positives = 55/146 (37%), Gaps = 7/146 (4%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 L I L + S S ++ +G L G+ G + NG KGF+VD +A++ Sbjct: 13 LIAISLGLVACSNQKSTNSEVLNKGTLTVGLE-GTYAPYSYRENGKLKGFEVDLAKAVAK 71 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 KI+++P L +K+ DI+ D + E F + Sbjct: 72 KA---GYKIKFVPTKWDSLIAGLGAKKFDIVI--NDIAMTPERKKAYTFSTPYIYSKSAL 126 Query: 130 IMHKKKG-ISSVSQLSGASICVQAGT 154 IM K I S + G I GT Sbjct: 127 IMKKTNNTIKSAKDIKGLKIAAATGT 152 >gi|259651117|dbj|BAI43279.1| amino acid ABC transporter permease component [Lactobacillus rhamnosus GG] Length = 487 Score = 36.2 bits (82), Expect = 8.3, Method: Compositional matrix adjust. Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 11/122 (9%) Query: 52 ANGDWK--GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 AN D K G D+D +A++ ++ K++ PL AL++KQID + T Sbjct: 50 ANQDNKYVGIDLDLIKAIAK---EEGFKVEIKPLGFNAAVQALEAKQIDGVIAGMSITPE 106 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 R+ L P Y G + KK I S+ L G + ++ GT + ADY + Sbjct: 107 RKQKF-LMSDPY-YKSGVVMAVAKKSTIKSLKDLRGKRVAIKTGTDS----ADYANSIKQ 160 Query: 170 KY 171 KY Sbjct: 161 KY 162 >gi|149907745|ref|ZP_01896492.1| Arginine-binding periplasmic protein 1 precursor [Moritella sp. PE36] gi|149809415|gb|EDM69344.1| Arginine-binding periplasmic protein 1 precursor [Moritella sp. PE36] Length = 247 Score = 36.2 bits (82), Expect = 8.3, Method: Compositional matrix adjust. Identities = 30/123 (24%), Positives = 59/123 (47%), Gaps = 16/123 (13%) Query: 47 FAEVKANGDWKGFDVDFCRALSSAI-----FDDPSKIQYLPLNAKERFLALQSKQIDILS 101 F + AN +++GFD+D RA+ S + F + S +P +L+ ++ D Sbjct: 34 FEMMDANNEFQGFDIDIARAVCSELKAECSFANQSFDSLIP--------SLKFRRYDAAI 85 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 D T R+ + F I Y++ ++ +K + V+ LSG ++ VQ GT+ + + Sbjct: 86 AAMDVTPARKKQVD--FSDI-YYENSAVLVAEKGKYNVVADLSGKAVGVQNGTSHQAYMT 142 Query: 162 DYF 164 + + Sbjct: 143 ETY 145 >gi|58337930|ref|YP_194515.1| amino acid ABC transporter [Lactobacillus acidophilus NCFM] gi|227902903|ref|ZP_04020708.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus acidophilus ATCC 4796] gi|58255247|gb|AAV43484.1| amino acid ABC transporter [Lactobacillus acidophilus NCFM] gi|227869319|gb|EEJ76740.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus acidophilus ATCC 4796] Length = 272 Score = 36.2 bits (82), Expect = 8.3, Method: Compositional matrix adjust. Identities = 37/163 (22%), Positives = 67/163 (41%), Gaps = 11/163 (6%) Query: 1 MYKDFFVSILCLIILFFTSFST------NASILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M K + +L ++L T + + I ++ + G++ V K NG Sbjct: 1 MKKKWIFVLLATLMLVLTGCESVQKRANTQNTWNKIAQKKQVVIGLDDSFVPMGFEKKNG 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G+DVD + + + S + ++ L++ ID+L T RE + Sbjct: 61 QLTGYDVDLAKEVFKLYGINVS---FQTIDWSMNVTELRNGTIDLLWNGYSITKQREKKV 117 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157 + RP + Q ++ K GISS SQ+ + +Q G+T E Sbjct: 118 AFS-RPYLR-NRQVLVVKKNSGISSFSQMKKYELGMQTGSTAE 158 >gi|229551205|ref|ZP_04439930.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus rhamnosus LMS2-1] gi|229315497|gb|EEN81470.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus rhamnosus LMS2-1] Length = 488 Score = 36.2 bits (82), Expect = 8.4, Method: Compositional matrix adjust. Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 11/122 (9%) Query: 52 ANGDWK--GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 AN D K G D+D +A++ ++ K++ PL AL++KQID + T Sbjct: 51 ANQDNKYVGIDLDLIKAIAK---EEGFKVEIKPLGFNAAVQALEAKQIDGVIAGMSITPE 107 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 R+ L P Y G + KK I S+ L G + ++ GT + ADY + Sbjct: 108 RKQKF-LMSDPY-YKSGVVMAVAKKSKIKSLKDLRGKRVAIKTGTDS----ADYANSIKQ 161 Query: 170 KY 171 KY Sbjct: 162 KY 163 >gi|329295876|ref|ZP_08253212.1| glutamine ABC transporter periplasmic protein [Plautia stali symbiont] Length = 248 Score = 35.8 bits (81), Expect = 8.5, Method: Compositional matrix adjust. Identities = 53/197 (26%), Positives = 84/197 (42%), Gaps = 30/197 (15%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 VS+ L + F S S+ A+ D K L +T V F E K + GFD+D A Sbjct: 7 VSVAALALAF--SLSSTAA---DKK----LVVATDTAFVPF-EFKQGDKYVGFDIDLWDA 56 Query: 67 LSSAIFDDPSKIQYL--PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 ++ + K+ Y P++ ALQ+K +D+ T+ E + F Y Sbjct: 57 IAKQL-----KLDYTLKPMDFSGIIPALQTKNVDLALAGI--TITEERKKAIEFSDGYYK 109 Query: 125 DGQ-GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 G + + + I + L+G + V++GT + DY KAH +K + + ID Sbjct: 110 SGLLVMVRNNENDIKGIDDLNGKVVAVKSGTGS----VDYAKAH-IKTKDL--RQFPNID 162 Query: 184 AAYR---AHRCDAYTGD 197 AY +R DA D Sbjct: 163 NAYMELGTNRADAVLHD 179 >gi|325964012|ref|YP_004241918.1| amino acid ABC transporter substrate-binding protein, PAAT family [Arthrobacter phenanthrenivorans Sphe3] gi|323470099|gb|ADX73784.1| amino acid ABC transporter substrate-binding protein, PAAT family [Arthrobacter phenanthrenivorans Sphe3] Length = 296 Score = 35.8 bits (81), Expect = 8.5, Method: Compositional matrix adjust. Identities = 49/240 (20%), Positives = 96/240 (40%), Gaps = 38/240 (15%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 G +K G F +V +G GFDV+ + +++ + KI++ + R ++ Sbjct: 59 GSIKIGTKFDQPLFGQVGLDGKPVGFDVEIGKLIAAELGIPADKIEWSETVSANREPFIE 118 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQA 152 ++D++ +T+ + + F Y GQ +++K I + G +C Sbjct: 119 QGKVDLVIAT--YTINDKRKQVVDFAGPYYEAGQALMVNKDNDTIKKPEDVKGKKVCSVT 176 Query: 153 GTTTELTLADYFKA-------HNMKYHPIVFERVEEID------AAYRAHRCDAYTGDIS 199 G+T T+ D + A ++ P+ ++VE + A + DA+ Sbjct: 177 GSTPAATIVDKYGAELVPAATYSACLEPLRNKQVEAVTTDNVILAGFVDKEPDAF----- 231 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 KL +D + +K P + +GDTE+ N W + + EE G +K Sbjct: 232 -----KLASD---------ETFTKEPYGIGLKKGDTEFRN---WINDQLEKFEENGSYEK 274 >gi|187919125|ref|YP_001888156.1| family 3 extracellular solute-binding protein [Burkholderia phytofirmans PsJN] gi|187717563|gb|ACD18786.1| extracellular solute-binding protein family 3 [Burkholderia phytofirmans PsJN] Length = 251 Score = 35.8 bits (81), Expect = 8.5, Method: Compositional matrix adjust. Identities = 41/156 (26%), Positives = 64/156 (41%), Gaps = 9/156 (5%) Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 E NG GFDVD AL+ A+ K+Q+ ++ K L + + D + + + Sbjct: 45 EYTENGARTGFDVDLMNALAKAM---GKKVQWTDIDFKGLIPGLIAHRFD--AAISGIYI 99 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168 E + + F Y G ++ I SV +L+G + VQ GT + L D F N Sbjct: 100 TDERAKVVDFTDSYYAGGLVVLVKSNSPIKSVEELNGKKVSVQVGTKSVNFLRDNFPQIN 159 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 + E+ +E+ R DA A Y L Sbjct: 160 R----VEVEKNQEMFDLVGIGRADAAVTGKPAAYQL 191 >gi|317047481|ref|YP_004115129.1| cationic amino acid ABC transporter periplasmic-binding protein [Pantoea sp. At-9b] gi|316949098|gb|ADU68573.1| cationic amino acid ABC transporter, periplasmic binding protein [Pantoea sp. At-9b] Length = 248 Score = 35.8 bits (81), Expect = 8.5, Method: Compositional matrix adjust. Identities = 54/202 (26%), Positives = 87/202 (43%), Gaps = 40/202 (19%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 VS+ L + F S S+ A+ D K L +T V F E K + GFD+D A Sbjct: 7 VSVAALALAF--SLSSTAA---DKK----LVVATDTAFVPF-EFKQGDQYVGFDIDLWAA 56 Query: 67 LSSAIFDDPSKIQYL--PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 ++ + K+ Y P++ ALQ++ +D+ T R+ + I + Sbjct: 57 IAKEL-----KLDYTLKPMDFSGIIPALQTRNVDVALAGITITDERK-------KAIDFS 104 Query: 125 DG---QGFIM---HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 DG G ++ + I S+ L+G + V++GT + DY KAH +K + + Sbjct: 105 DGYYKSGLLVMVRSNENNIKSIDDLNGKVVAVKSGTGS----VDYAKAH-IKSKDL--RQ 157 Query: 179 VEEIDAAYR---AHRCDAYTGD 197 ID AY +R DA D Sbjct: 158 FPNIDNAYMELGTNRADAVLHD 179 >gi|261340318|ref|ZP_05968176.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Enterobacter cancerogenus ATCC 35316] gi|288317409|gb|EFC56347.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Enterobacter cancerogenus ATCC 35316] Length = 266 Score = 35.8 bits (81), Expect = 8.7, Method: Compositional matrix adjust. Identities = 49/234 (20%), Positives = 94/234 (40%), Gaps = 13/234 (5%) Query: 6 FVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 + ++ + ++ S T A+ +L +K+RG L G+ F+ +G GF+V+F Sbjct: 11 LMGVMAVALVAGMSVKTFAAENLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEF 70 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 L+ + K P +L SK+ID++ + R+ + P T Sbjct: 71 AEELAKHL---GVKASLKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDFS-TPYTV 126 Query: 124 FDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Q + +G I S + L G + V GT E L + +++ + + +++ Sbjct: 127 SGIQALVKKGNEGTIKSAADLKGKKVGVGLGTNYEEWLRQNVQGVDIRTYDDDPTKYQDL 186 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 R R DA + L AL L + + D S+ A+ +G+ + Sbjct: 187 ----RVGRIDAIL--VDRLAALDLVKKTNNTLAVAGDAFSRQESGVAVRKGNDD 234 >gi|199599468|ref|ZP_03212860.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus rhamnosus HN001] gi|199589640|gb|EDY97754.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus rhamnosus HN001] Length = 488 Score = 35.8 bits (81), Expect = 8.7, Method: Compositional matrix adjust. Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 11/122 (9%) Query: 52 ANGDWK--GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 AN D K G D+D +A++ ++ K++ PL AL++KQID + T Sbjct: 51 ANQDNKYVGIDLDLIKAIAK---EEGFKVEIKPLGFNAAVQALEAKQIDGVIAGMSITPE 107 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 R+ L P Y G + KK I S+ L G + ++ GT + ADY + Sbjct: 108 RKQKF-LMSDPY-YKSGVVMAVAKKSTIKSLKDLRGKRVAIKTGTDS----ADYANSIKQ 161 Query: 170 KY 171 KY Sbjct: 162 KY 163 >gi|167766045|ref|ZP_02438098.1| hypothetical protein CLOSS21_00538 [Clostridium sp. SS2/1] gi|317498084|ref|ZP_07956387.1| bacterial extracellular solute-binding protein, family 3 [Lachnospiraceae bacterium 5_1_63FAA] gi|167712125|gb|EDS22704.1| hypothetical protein CLOSS21_00538 [Clostridium sp. SS2/1] gi|291560003|emb|CBL38803.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [butyrate-producing bacterium SSC/2] gi|316894672|gb|EFV16851.1| bacterial extracellular solute-binding protein, family 3 [Lachnospiraceae bacterium 5_1_63FAA] Length = 261 Score = 35.8 bits (81), Expect = 8.8, Method: Compositional matrix adjust. Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 5/101 (4%) Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+ + + + D +IQ + K A++S I+ + T R+ S+ Sbjct: 56 GFDIAMIKEIGKRM-DKKVEIQNMEF--KSLIGAMESNSINTIIAGMTKTKERQKSVD-- 110 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTEL 158 F Y Q I+ K I +SQL G + VQ GTT ++ Sbjct: 111 FSDSYYTSNQAIILKKDSKIKKLSQLEGKKVGVQEGTTGDI 151 >gi|295107394|emb|CBL04937.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Gordonibacter pamelaeae 7-10-1-b] Length = 278 Score = 35.8 bits (81), Expect = 8.9, Method: Compositional matrix adjust. Identities = 28/127 (22%), Positives = 56/127 (44%), Gaps = 5/127 (3%) Query: 36 LKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L+ G+ + +VGF + + G + G ++D +++ + ++++ + R L + Sbjct: 43 LRVGVRSDVVGFGYLNEGTGKYYGLEIDIAEEMAARM--GYGSVEFVTVTPDTRKDMLVN 100 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 ++D + RE + F P Y D ++ K +SS+ L G + AGT Sbjct: 101 GEVDCMVACYSIAESREKNFD--FSPSYYTDASIVMVEKSSLVSSIDDLKGLTFGTMAGT 158 Query: 155 TTELTLA 161 T LA Sbjct: 159 NTAPQLA 165 >gi|301029372|ref|ZP_07192468.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 196-1] gi|299877727|gb|EFI85938.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 196-1] Length = 285 Score = 35.8 bits (81), Expect = 9.0, Method: Compositional matrix adjust. Identities = 46/208 (22%), Positives = 90/208 (43%), Gaps = 12/208 (5%) Query: 6 FVSILCLIILFFTSFST--NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 +S++ + ++ S + + +L +K+RG L G+ F+ +G GF+V+F Sbjct: 30 LMSVMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEF 89 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 + L+ + + S P +L SK+ID++ + R+ + P T Sbjct: 90 AQQLAKHLGVEAS---LKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDFS-TPYTI 145 Query: 124 FDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Q + +G I + + L G + V GT E L + +++ + + +++ Sbjct: 146 SGIQALVKKGNEGTIKTAADLKGKKVGVGLGTNYEEWLRQNVQGVDVRTYDDDPTKYQDL 205 Query: 183 DAAYRAHRCDAYTGD-ISALYALKLTND 209 R R DA D ++AL +K TND Sbjct: 206 ----RVGRIDAILVDRLAALDLVKKTND 229 >gi|239834992|ref|ZP_04683320.1| extracellular solute-binding protein [Ochrobactrum intermedium LMG 3301] gi|239823055|gb|EEQ94624.1| extracellular solute-binding protein [Ochrobactrum intermedium LMG 3301] Length = 288 Score = 35.8 bits (81), Expect = 9.0, Method: Compositional matrix adjust. Identities = 38/153 (24%), Positives = 66/153 (43%), Gaps = 13/153 (8%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE---RFLAL 92 ++ G F + +G KGFD+D A+ + D +A E AL Sbjct: 51 IRMGAEGAYAPFNYLDPSGQLKGFDIDVGNAICEKLKAD------CVWSANEWSGIIPAL 104 Query: 93 QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS--GASICV 150 QSK+ DI++ + T R ++F Y++ F+ K+ G+ V+ S G I Sbjct: 105 QSKKFDIMASSMAITESRMQQ--VSFSDPYYYNTMRFVALKELGLKDVTPESAKGKVIGT 162 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 Q G+ L +F + +K +P + E +I+ Sbjct: 163 QTGSIAFDALQRFFPNNEVKLYPTLEEAFLDIE 195 >gi|254298886|ref|ZP_04966336.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Burkholderia pseudomallei 406e] gi|157808906|gb|EDO86076.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Burkholderia pseudomallei 406e] Length = 260 Score = 35.8 bits (81), Expect = 9.0, Method: Compositional matrix adjust. Identities = 37/162 (22%), Positives = 66/162 (40%), Gaps = 8/162 (4%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 +L +K+ G LK + F +G +GFDVD + +++ + P Q++ Sbjct: 23 LLDSVKQAGVLKIALEGTYPPFDYRNGDGQLEGFDVDVAKEVAARLGVKP---QFVTTEW 79 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQL 143 LQ+ + D++ T R +L + +P Y Q I K + L Sbjct: 80 SGILAGLQAGKFDVIVNQVGITPARRQALDFS-QPYVYSAAQ-LIQRADDKHDYGAPGAL 137 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 G I V GT LA + ++K +P E++ ++ A Sbjct: 138 QGKRIGVTLGTNFA-DLAKTLQGVDVKTYPGAPEKLRDVAAG 178 >gi|326333229|ref|ZP_08199476.1| glutamate-binding protein [Nocardioidaceae bacterium Broad-1] gi|325948873|gb|EGD40966.1| glutamate-binding protein [Nocardioidaceae bacterium Broad-1] Length = 272 Score = 35.8 bits (81), Expect = 9.2, Method: Compositional matrix adjust. Identities = 38/171 (22%), Positives = 72/171 (42%), Gaps = 8/171 (4%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 +K GI G +A+G + GFDVD ++ + + +I+++ + R L+ Sbjct: 37 IKIGIKFDQPGLGFKEADGSYSGFDVDMATYIAEGLGYEGDQIEFVEAVSANRETFLKDG 96 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGT 154 +D++ +++ E + F Y GQ ++ I+ L G +C G+ Sbjct: 97 TVDMILAT--YSITDERKAEVDFAGPYYIAGQDLLVAADNTDITGPDTLDGKKLCSVTGS 154 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD--ISALYA 203 T+ + D + A ++ F+ + A + DA T D I A YA Sbjct: 155 TSAQKVKDEY-AKGVQLQE--FDTYSKCVTAIEGGQLDAMTTDDIILAGYA 202 >gi|295095483|emb|CBK84573.1| L-cystine-binding protein/Diaminopimelate-binding protein [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 266 Score = 35.8 bits (81), Expect = 9.2, Method: Compositional matrix adjust. Identities = 49/234 (20%), Positives = 95/234 (40%), Gaps = 13/234 (5%) Query: 6 FVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 + ++ + ++ S T A+ +L +K+RG L G+ F+ +G GF+V+F Sbjct: 11 LMGMMAVALVAGMSVKTFAAENLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEF 70 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 + L+ + K P +L SK+ID++ + R+ + P T Sbjct: 71 AQELAKHL---GVKASLKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDFS-TPYTV 126 Query: 124 FDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Q + +G I S + L G + V GT E L + +++ + + +++ Sbjct: 127 SGIQALVKKGNEGSIKSAADLKGKKVGVGLGTNYEEWLRQNVQGVDIRTYDDDPTKYQDL 186 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 R R DA + L AL L + + D S+ A+ +G+ + Sbjct: 187 ----RVGRIDAIL--VDRLAALDLVKKTNNTLAVAGDAFSRQESGVAVRKGNED 234 >gi|254172092|ref|ZP_04878768.1| pyrolysin [Thermococcus sp. AM4] gi|214033988|gb|EEB74814.1| pyrolysin [Thermococcus sp. AM4] Length = 1311 Score = 35.8 bits (81), Expect = 9.2, Method: Compositional matrix adjust. Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 14/110 (12%) Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA--AYRAHRCDAYTGDISALY 202 G S+ + L Y K HN+ Y+PI+ R E+ A A D G I Sbjct: 560 GTSMATPHVSGAVALLISYAKEHNLTYNPIMLRRALELSAKPVEGATMIDQGFGLIQVED 619 Query: 203 ALKLTNDRPSEHVI----------LPDIISKS--PLAPAIIQGDTEWYNI 240 A+K+ + E I D++ K PL+PA +Q ++ +YN+ Sbjct: 620 AIKVLQNLSKEQTIYIYGGTTYTGFKDLLGKKKIPLSPAYVQFNSYFYNM 669 >gi|290508436|ref|ZP_06547807.1| lysine/arginine/ornithine transport system substrate-binding protein [Klebsiella sp. 1_1_55] gi|289777830|gb|EFD85827.1| lysine/arginine/ornithine transport system substrate-binding protein [Klebsiella sp. 1_1_55] Length = 260 Score = 35.8 bits (81), Expect = 9.5, Method: Compositional matrix adjust. Identities = 45/191 (23%), Positives = 81/191 (42%), Gaps = 12/191 (6%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 +IL L +L S+ AS+ + + ++ G + F+ A GD+ GFD+D L Sbjct: 4 TILALSLL--VGMSSTASVFAALPQS--IRIGTDATYAPFSSKDAKGDFVGFDIDLGNEL 59 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 S I K ++ + +L++K+ID + + T R+ +AF Y Sbjct: 60 CSRI---KVKCTWVGSDFDSLIPSLKAKKIDAIISSLSITEKRQQE--IAFSDKLYAADS 114 Query: 128 GFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 I K I ++ L G + V G+T E D +++ + + ++ + I + Sbjct: 115 RLIAAKGSPIQPTLEALKGKHVGVLQGSTQEAYANDRWRSQGVDV--VAYQNQDLIYSDL 172 Query: 187 RAHRCDAYTGD 197 A R DA D Sbjct: 173 AAGRLDAALQD 183 >gi|167743916|ref|ZP_02416690.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei 14] Length = 240 Score = 35.8 bits (81), Expect = 9.5, Method: Compositional matrix adjust. Identities = 28/117 (23%), Positives = 50/117 (42%), Gaps = 10/117 (8%) Query: 61 VDFCRALSSAIFDDPSK--------IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 V F L+ A+ DD K I Y+P+ + R L + D+ +T T R Sbjct: 49 VGFSADLTDAVVDDVRKKLKMPGLQIAYIPVTGQNRNPLLVNDTYDLEGGSTTNTAAR-- 106 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 ++F ++ G ++ K I + L+G ++ AG+T E + Y H++ Sbjct: 107 GQDVSFSMNLFYAGTRVLVKKASRIRGYADLAGKTVATAAGSTNENVIRKYAADHHL 163 >gi|53723354|ref|YP_112339.1| glutamine ABC transporter periplasmic protein [Burkholderia pseudomallei K96243] gi|76818697|ref|YP_336644.1| glutamine ABC transporter periplasmic protein [Burkholderia pseudomallei 1710b] gi|126457176|ref|YP_001077187.1| glutamine ABC transporter periplasmic protein [Burkholderia pseudomallei 1106a] gi|134281791|ref|ZP_01768498.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia pseudomallei 305] gi|167725482|ref|ZP_02408718.1| glutamine ABC transporter periplasmic protein [Burkholderia pseudomallei DM98] gi|167821597|ref|ZP_02453277.1| glutamine ABC transporter periplasmic protein [Burkholderia pseudomallei 91] gi|167829941|ref|ZP_02461412.1| glutamine ABC transporter periplasmic protein [Burkholderia pseudomallei 9] gi|167851398|ref|ZP_02476906.1| glutamine ABC transporter periplasmic protein [Burkholderia pseudomallei B7210] gi|167900040|ref|ZP_02487441.1| glutamine ABC transporter periplasmic protein [Burkholderia pseudomallei 7894] gi|167908343|ref|ZP_02495548.1| glutamine ABC transporter periplasmic protein [Burkholderia pseudomallei NCTC 13177] gi|167916697|ref|ZP_02503788.1| glutamine ABC transporter periplasmic protein [Burkholderia pseudomallei 112] gi|167924542|ref|ZP_02511633.1| glutamine ABC transporter periplasmic protein [Burkholderia pseudomallei BCC215] gi|226199303|ref|ZP_03794863.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia pseudomallei Pakistan 9] gi|242313028|ref|ZP_04812045.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia pseudomallei 1106b] gi|254182414|ref|ZP_04889008.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia pseudomallei 1655] gi|254186971|ref|ZP_04893486.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia pseudomallei Pasteur 52237] gi|254192568|ref|ZP_04899007.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia pseudomallei S13] gi|254265600|ref|ZP_04956465.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia pseudomallei 1710a] gi|254296639|ref|ZP_04964095.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia pseudomallei 406e] gi|52213768|emb|CAH39823.1| glutamine-binding periplasmic protein precursor [Burkholderia pseudomallei K96243] gi|76583170|gb|ABA52644.1| glutamine-binding periplasmic protein precursor [Burkholderia pseudomallei 1710b] gi|126230944|gb|ABN94357.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia pseudomallei 1106a] gi|134246853|gb|EBA46940.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia pseudomallei 305] gi|157806490|gb|EDO83660.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia pseudomallei 406e] gi|157934654|gb|EDO90324.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia pseudomallei Pasteur 52237] gi|169649326|gb|EDS82019.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia pseudomallei S13] gi|184212949|gb|EDU09992.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia pseudomallei 1655] gi|225928710|gb|EEH24737.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia pseudomallei Pakistan 9] gi|242136267|gb|EES22670.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia pseudomallei 1106b] gi|254216602|gb|EET05987.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia pseudomallei 1710a] Length = 250 Score = 35.8 bits (81), Expect = 9.6, Method: Compositional matrix adjust. Identities = 46/166 (27%), Positives = 66/166 (39%), Gaps = 17/166 (10%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 L G +T + F E K + GFD+D ++ KIQ P++ ALQ++ Sbjct: 28 LVVGTDTSFMPF-EFKQGDKYVGFDLDLWAEIAKGA-GWTYKIQ--PMDFAGLIPALQTQ 83 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDG-QGFIMHKKKGISSVSQLSGASICVQAGT 154 ID+ + T+ E + F Y G + I S+ L+G I + GT Sbjct: 84 NIDVAL--SGMTIKEERRKAIDFSDPYYDSGLAAMVQANNTTIKSIDDLNGKVIAAKTGT 141 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAY---RAHRCDAYTGD 197 T D+ KAH P + ID AY A R DA D Sbjct: 142 AT----IDWIKAH---LKPKEIRQFPNIDQAYLALEAGRVDAAMHD 180 >gi|238784713|ref|ZP_04628717.1| Cystine-binding periplasmic protein [Yersinia bercovieri ATCC 43970] gi|238714392|gb|EEQ06400.1| Cystine-binding periplasmic protein [Yersinia bercovieri ATCC 43970] Length = 253 Score = 35.8 bits (81), Expect = 9.7, Method: Compositional matrix adjust. Identities = 48/209 (22%), Positives = 87/209 (41%), Gaps = 17/209 (8%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 V++ L S++ +L +K+RG L G+ F+ +G GF+VDF Sbjct: 1 MVAVALATGLNVKSYAA-GDLLNQVKERGTLIVGLEGTYPPFSFQGEDGKLTGFEVDFAN 59 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 AL+ + K + P +L+SK+ID+ + R+ + T + Sbjct: 60 ALAEHM---GIKAKITPTKWDGMLASLESKRIDVAINQVTISDERKKKYDFS----TPYT 112 Query: 126 GQGFIMHKKKG----ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 G + KKG + L G + V G+ E L + K +++ + + ++ Sbjct: 113 VSGIQVLTKKGNEGNFTKPEDLEGKKVGVGLGSNYEQWLRENLKGVDIRTYDDDPTKYQD 172 Query: 182 IDAAYRAHRCDAYTGD-ISALYALKLTND 209 + R R DA D ++AL +K TN+ Sbjct: 173 L----RVGRTDAILVDRLAALDLVKKTNN 197 >gi|238791651|ref|ZP_04635289.1| Glutamate/aspartate periplasmic-binding protein [Yersinia intermedia ATCC 29909] gi|238729267|gb|EEQ20783.1| Glutamate/aspartate periplasmic-binding protein [Yersinia intermedia ATCC 29909] Length = 309 Score = 35.8 bits (81), Expect = 9.7, Method: Compositional matrix adjust. Identities = 47/249 (18%), Positives = 98/249 (39%), Gaps = 9/249 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KIQYLP 82 L IK G + G V F+ G+ D+ + A+ + P +++ +P Sbjct: 40 LKKIKDSGVIVVGHRESSVPFSYYDNQQKVVGYAQDYSNLIIDAVKKKLNAPDLQVKLIP 99 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R LQ+ D +T L R+ AF + G + K + Sbjct: 100 ITSQNRIPLLQNGTFDFECGSTTNNLERQQQA--AFSNTIFVVGTRLLTKKGSDVKDFKD 157 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+G ++ V +GTT+E+ L + M I + + + R A+ D + L Sbjct: 158 LAGKAVVVTSGTTSEVLLNKLNEKDKMDMRIISAKDHGDSFRTLESGRAVAFMMDDALLA 217 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 + +P + I+ S+ + + D + ++ T + +A+ G+ +K+ + Sbjct: 218 GERAKAKKPDQWDIVGKPQSQEAYGCMLRKNDPAFKALLDET---IASAQTSGVAEKSFD 274 Query: 263 QVSKDTTNP 271 + K+ P Sbjct: 275 RWFKNPIPP 283 >gi|322373064|ref|ZP_08047600.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus sp. C150] gi|321278106|gb|EFX55175.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus sp. C150] Length = 283 Score = 35.8 bits (81), Expect = 9.8, Method: Compositional matrix adjust. Identities = 30/136 (22%), Positives = 58/136 (42%), Gaps = 5/136 (3%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 F+T K +K G + V + NG + GFD+D A+ D ++ Sbjct: 30 FATQKDQWQTYTKEKKIKIGFDATFVPMGYEEKNGSYVGFDIDLATAVFKLYGID---VE 86 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 + ++ + L++ ID++ +++ E F + Q + K GI S Sbjct: 87 WQAIDWDMKETELKNGTIDLIWNG--YSVTDERKQSADFTEPYMINEQVLVTKKSSGIDS 144 Query: 140 VSQLSGASICVQAGTT 155 V+ +SG ++ QAG++ Sbjct: 145 VAGMSGKTLGAQAGSS 160 Searching..................................................done Results from round 2 >gi|254780170|ref|YP_003064583.1| cationic amino acid ABC transporter, periplasmic binding protein [Candidatus Liberibacter asiaticus str. psy62] gi|254039847|gb|ACT56643.1| cationic amino acid ABC transporter, periplasmic binding protein [Candidatus Liberibacter asiaticus str. psy62] Length = 342 Score = 510 bits (1313), Expect = e-142, Method: Composition-based stats. Identities = 342/342 (100%), Positives = 342/342 (100%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD Sbjct: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP Sbjct: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE Sbjct: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI Sbjct: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII Sbjct: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR Sbjct: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 >gi|315122673|ref|YP_004063162.1| cationic amino acid ABC transporter, periplasmic binding protein [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313496075|gb|ADR52674.1| cationic amino acid ABC transporter, periplasmic binding protein [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 342 Score = 479 bits (1233), Expect = e-133, Method: Composition-based stats. Identities = 274/342 (80%), Positives = 310/342 (90%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 MY++FF+SILCLI L FT+F T ASIL +IKKRGFLKCGINTGL GF+E++ANGDWKGFD Sbjct: 1 MYRNFFISILCLIGLTFTNFPTYASILQNIKKRGFLKCGINTGLTGFSEIQANGDWKGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDFC+ALS+AIFDD SK+QYLPLNAKERF++LQSKQIDILSRNTDWTLLRE LGLAFRP Sbjct: 61 VDFCKALSAAIFDDSSKVQYLPLNAKERFISLQSKQIDILSRNTDWTLLRETKLGLAFRP 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 ITYFDGQG +M+KK G+SS QLS ASICVQAGTTTE TLADYFKAHNMKYHPIVFERVE Sbjct: 121 ITYFDGQGLMMYKKSGVSSALQLSDASICVQAGTTTEKTLADYFKAHNMKYHPIVFERVE 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 EIDAAYR+HRCD YTGD SALYAL+L+ D P+EHVIL DIISKSPL PAI+QGD+EW NI Sbjct: 181 EIDAAYRSHRCDVYTGDKSALYALRLSTDNPNEHVILKDIISKSPLGPAILQGDSEWSNI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 VSWTHYA+V AEELGITQ N++Q T +PD++RFLGIDKS+NIGE+LGL+KDW Y+II Sbjct: 241 VSWTHYALVNAEELGITQSNVDQKRLTTNDPDMKRFLGIDKSANIGESLGLSKDWAYQII 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +HMGNYGE+FDRNLG+QS LKIPR YNALWSKGG+MYAPPIR Sbjct: 301 KHMGNYGEIFDRNLGSQSALKIPREYNALWSKGGIMYAPPIR 342 >gi|241204488|ref|YP_002975584.1| cationic amino acid ABC transporter periplasmic-binding protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858378|gb|ACS56045.1| cationic amino acid ABC transporter, periplasmic binding protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 341 Score = 478 bits (1231), Expect = e-133, Method: Composition-based stats. Identities = 191/342 (55%), Positives = 261/342 (76%), Gaps = 1/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + +L + + +A+ L D+K +GF++CG+NTGL GFA A+G+W GFD Sbjct: 1 MKNKLLSAAIGAAVLAVGASAASATTLSDVKAKGFVQCGVNTGLTGFAAPDASGNWAGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDFC+A++SA+F DP+K++Y P NAKERF ALQS +ID+LSRNT WT+ R+ +LG FRP Sbjct: 61 VDFCKAVASAVFGDPTKVKYTPTNAKERFTALQSGEIDVLSRNTTWTINRDTALGFNFRP 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DGQGF++ K + S +LSGA+ICVQ+GTTTEL LADYFK +N++Y+P+VFE + Sbjct: 121 VTYYDGQGFMVRKGLNVKSALELSGAAICVQSGTTTELNLADYFKTNNLQYNPVVFENLP 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E++AAY A RCD YT D S LY+L+LT P EHVILP+IISK PL PA+ QGD +W++I Sbjct: 181 EVNAAYDAGRCDVYTTDQSGLYSLRLTLKNPDEHVILPEIISKEPLGPAVRQGDDQWFDI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 VSWT YA++ AEE GITQ N++++ K++ NPD++RFLG + + IG LGLT DW +I Sbjct: 241 VSWTAYALINAEEFGITQANVDEM-KNSPNPDIKRFLGSETDTKIGTDLGLTNDWAANVI 299 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F+RN+G S LKI RG NALW+KGG+ YAPP+R Sbjct: 300 KGVGNYGEIFERNIGQGSPLKIARGLNALWNKGGIQYAPPVR 341 >gi|227821880|ref|YP_002825850.1| hypothetical protein NGR_c13170 [Sinorhizobium fredii NGR234] gi|227340879|gb|ACP25097.1| hypothetical protein NGR_c13170 [Sinorhizobium fredii NGR234] Length = 341 Score = 478 bits (1230), Expect = e-133, Method: Composition-based stats. Identities = 182/342 (53%), Positives = 261/342 (76%), Gaps = 1/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + ++ ++ + + +A+ L D+K +GF++CG+NTGL GFA A+G+W GFD Sbjct: 1 MARRILTALFGAAVMGIGAQAASAATLDDVKAKGFVQCGVNTGLAGFAAPDASGNWSGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+C+A+++A+F D +K++Y P +AKERF ALQS ++D+L+RNT WT+ R+ +LG FRP Sbjct: 61 VDYCKAIAAAVFGDATKVKYTPTSAKERFPALQSGEVDVLARNTTWTINRDTALGFNFRP 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K + S +LSGA++CVQ GTTTEL LADYFK +N++Y+P+VFE++E Sbjct: 121 VNYYDGQGFMVRKSLNVKSALELSGAAVCVQTGTTTELNLADYFKTNNLQYNPVVFEKLE 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E++AAY A RCD YT D S LY+L+LT +P +H+ILP+IISK PL PA+ QGD +W++I Sbjct: 181 EVNAAYDAGRCDVYTTDQSGLYSLRLTLSKPDDHMILPEIISKEPLGPAVRQGDDQWFDI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V+W HYA++ AEE G+TQ N+ ++ K + NPDVQRFLG++ S IG LGLT +W +I Sbjct: 241 VTWVHYALIQAEEFGVTQANVEEMKK-SPNPDVQRFLGVEADSKIGTDLGLTNEWAVNVI 299 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+FDRN+G S LKI RG NALW+KGG+ YAPP+R Sbjct: 300 KAVGNYGEVFDRNIGAGSPLKIERGLNALWNKGGIQYAPPVR 341 >gi|116251960|ref|YP_767798.1| general L-amino acid substrate binding protein [Rhizobium leguminosarum bv. viciae 3841] gi|3182887|sp|Q52812|AAPJ_RHIL3 RecName: Full=General L-amino acid-binding periplasmic protein AapJ; Flags: Precursor gi|1154894|emb|CAA57933.1| general amino acid ABC type transporter [Rhizobium leguminosarum] gi|115256608|emb|CAK07696.1| General L-amino acid substrate binding protein [Rhizobium leguminosarum bv. viciae 3841] Length = 341 Score = 477 bits (1229), Expect = e-133, Method: Composition-based stats. Identities = 190/342 (55%), Positives = 261/342 (76%), Gaps = 1/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + +L + + +A+ L D+K +GF++CG+NTGL GFA A+G+W GFD Sbjct: 1 MKNKLLSAAIGAAVLAVGASAASATTLSDVKAKGFVQCGVNTGLTGFAAPDASGNWAGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDFC+A++SA+F DP+K++Y P NAKERF ALQS +ID+LSRNT WT+ R+ +LG FRP Sbjct: 61 VDFCKAVASAVFGDPTKVKYTPTNAKERFTALQSGEIDVLSRNTTWTINRDTALGFNFRP 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DGQGF++ K + S +LSGA+ICVQ+GTTTEL LADYFK +N++Y+P+VFE + Sbjct: 121 VTYYDGQGFMVRKGLNVKSALELSGAAICVQSGTTTELNLADYFKTNNLQYNPVVFENLP 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E++AAY A RCD YT D S LY+L+LT P EH+ILP+IISK PL PA+ QGD +W++I Sbjct: 181 EVNAAYDAGRCDVYTTDQSGLYSLRLTLKNPDEHIILPEIISKEPLGPAVRQGDDQWFDI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 VSWT YA++ AEE GITQ N++++ K++ NPD++RFLG + + IG LGLT DW +I Sbjct: 241 VSWTAYALINAEEFGITQANVDEM-KNSPNPDIKRFLGSETDTKIGTDLGLTNDWAANVI 299 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F+RN+G S LKI RG NALW+KGG+ YAPP+R Sbjct: 300 KGVGNYGEIFERNIGQGSPLKIARGLNALWNKGGIQYAPPVR 341 >gi|209549162|ref|YP_002281079.1| cationic amino acid ABC transporter periplasmic binding protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209534918|gb|ACI54853.1| cationic amino acid ABC transporter, periplasmic binding protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 341 Score = 477 bits (1228), Expect = e-132, Method: Composition-based stats. Identities = 191/342 (55%), Positives = 262/342 (76%), Gaps = 1/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M +++ + + + +A+ LGD+K +GF++CG+NTGL GFA A+G+W GFD Sbjct: 1 MKNKLLSAVIGAAVFALGTSAASATTLGDVKAKGFVQCGVNTGLTGFAAPDASGNWAGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDFC+A++SA+F DP+K++Y P NAKERF ALQS +ID+LSRNT WT+ R+ +LG FRP Sbjct: 61 VDFCKAVASAVFGDPTKVKYTPTNAKERFTALQSGEIDVLSRNTTWTINRDTALGFNFRP 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DGQGF++ K + S +LSGA+ICVQ+GTTTEL LADYFK +N++Y+P+VFE + Sbjct: 121 VTYYDGQGFMVRKSLNVKSALELSGAAICVQSGTTTELNLADYFKTNNLQYNPVVFENLP 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E++AAY A RCD YT D S LY+L+LT P EHVILP+IISK PL PA+ QGD +W++I Sbjct: 181 EVNAAYDAGRCDVYTTDQSGLYSLRLTLKNPDEHVILPEIISKEPLGPAVRQGDDQWFDI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 VSWT YA++ AEE GITQ N++++ K++ NPD++RFLG + + IG LGLT DW +I Sbjct: 241 VSWTAYALINAEEFGITQANVDEM-KNSPNPDIKRFLGSETDTKIGTDLGLTNDWAANVI 299 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F+RN+G S LKI RG NALW+KGG+ YAPP+R Sbjct: 300 KGVGNYGEIFERNIGQGSPLKIARGLNALWNKGGIQYAPPVR 341 >gi|15965231|ref|NP_385584.1| general L-amino acid-binding periplasmic ABC transporter protein [Sinorhizobium meliloti 1021] gi|307316996|ref|ZP_07596437.1| cationic amino acid ABC transporter, periplasmic binding protein [Sinorhizobium meliloti AK83] gi|15074411|emb|CAC46057.1| Probable general L-amino acid-binding periplasmic ABC transporter [Sinorhizobium meliloti 1021] gi|306897084|gb|EFN27829.1| cationic amino acid ABC transporter, periplasmic binding protein [Sinorhizobium meliloti AK83] Length = 341 Score = 476 bits (1225), Expect = e-132, Method: Composition-based stats. Identities = 189/342 (55%), Positives = 267/342 (78%), Gaps = 1/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + +++ ++ + + +A+ L D+K +GF++CG+NTGL GFA A+G+W GFD Sbjct: 1 MARRILTALVGAAVVGIGTHAASAATLDDVKAKGFVQCGVNTGLAGFAAPDASGNWSGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+C+A+++AIF D SK++Y PL+AKERF ALQS ++D+L+RNT W++ R+ +LG FRP Sbjct: 61 VDYCKAIAAAIFGDGSKVKYTPLSAKERFPALQSGEVDVLARNTTWSINRDTALGFNFRP 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K+ + S +LSGA++CVQ GTTTEL LADYFKA+N++Y+P+VFE++E Sbjct: 121 VNYYDGQGFMVRKELDVKSALELSGAAVCVQTGTTTELNLADYFKANNLQYNPVVFEKLE 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E++AAY A RCD YT D S LY+L+LT +P +H++LP+IISK PLAPA+ QGD +W++I Sbjct: 181 EVNAAYDAGRCDVYTTDQSGLYSLRLTLSKPDDHIVLPEIISKEPLAPAVRQGDDQWFDI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 VSW HYA+V AEE G+TQ N+ ++ K +TNPDVQRFLG++ S IG LGLT +W I+ Sbjct: 241 VSWVHYALVQAEEFGVTQANLEEMKK-STNPDVQRFLGVEADSKIGTDLGLTNEWAVNIV 299 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+FDRN+G S LKI RG NALW+KGGL YAPP+R Sbjct: 300 KAVGNYGEVFDRNIGAGSPLKIERGLNALWNKGGLQYAPPVR 341 >gi|327190790|gb|EGE57858.1| general L-amino acid ABC transporter, substrate-binding protein [Rhizobium etli CNPAF512] Length = 341 Score = 475 bits (1223), Expect = e-132, Method: Composition-based stats. Identities = 188/342 (54%), Positives = 264/342 (77%), Gaps = 1/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + +L + + +A+ LGD+K +GF++CG+NTGL GFA A+G+W GFD Sbjct: 1 MKNKLLSAAIGAAVLALGAPAASATTLGDVKAKGFVQCGVNTGLAGFAAPDASGNWAGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDFC+A++SA+F DP+K+++ PL+A RF ALQS +ID+L+RNT W++ R+ +LGL FR Sbjct: 61 VDFCKAVASAVFGDPTKVKFTPLSAANRFPALQSGEIDVLARNTTWSINRDTALGLNFRF 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K + S +LSGAS+CVQ+GTTTEL LADYFKA+N++Y+P+VFE+++ Sbjct: 121 VNYYDGQGFMVRKSLNVKSALELSGASVCVQSGTTTELNLADYFKANNLQYNPVVFEKLD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E++AAY A RCD YT D S LY+L+LT P EH ILP+IISK PLAPA+ QGD +W++I Sbjct: 181 EVNAAYDAGRCDVYTTDQSGLYSLRLTLKNPDEHAILPEIISKEPLAPAVRQGDDQWFDI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 VSW YAM+ AEE GITQ N++ + K++ NPD++RFLG++ + IG LGLT +W Y II Sbjct: 241 VSWVGYAMINAEEFGITQANVDDM-KNSPNPDIKRFLGVEADTKIGTDLGLTNEWAYNII 299 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +++GNYGE+F+RN+G S LKI RG NALW+KGG+ YAPP+R Sbjct: 300 KNVGNYGEVFERNIGQGSPLKIARGLNALWNKGGIQYAPPVR 341 >gi|190891587|ref|YP_001978129.1| general L-amino acid ABC transporter, substrate-binding protein [Rhizobium etli CIAT 652] gi|190696866|gb|ACE90951.1| general L-amino acid ABC transporter, substrate-binding protein [Rhizobium etli CIAT 652] Length = 341 Score = 474 bits (1221), Expect = e-132, Method: Composition-based stats. Identities = 187/342 (54%), Positives = 264/342 (77%), Gaps = 1/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + +L + + +A+ LGD+K +GF++CG+NTGL GFA A+G+W GFD Sbjct: 1 MKNKLLSAAIGAAVLALGAPAASATTLGDVKAKGFVQCGVNTGLAGFAAPDASGNWAGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDFC+A++SA+F DP+K+++ PL+A RF ALQS +ID+L+RNT W++ R+ +LGL FR Sbjct: 61 VDFCKAVASAVFGDPTKVKFTPLSAANRFPALQSGEIDVLARNTTWSINRDTALGLNFRF 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K + S +LSGAS+CVQ+GTTTEL LADYFKA+N++Y+P+VFE+++ Sbjct: 121 VNYYDGQGFMVRKSLNVKSALELSGASVCVQSGTTTELNLADYFKANNLQYNPVVFEKLD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E++AAY A RCD YT D S LY+L+LT P EH ILP+IISK PLAPA+ QGD +W++I Sbjct: 181 EVNAAYDAGRCDVYTTDQSGLYSLRLTLKNPDEHAILPEIISKEPLAPAVRQGDDQWFDI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 VSW YAM+ AEE GITQ N++ + K++ NPD++RFLG++ + IG LGLT +W Y I+ Sbjct: 241 VSWVGYAMINAEEFGITQANVDDM-KNSPNPDIKRFLGVEADTKIGTDLGLTNEWAYNIV 299 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +++GNYGE+F+RN+G S LKI RG NALW+KGG+ YAPP+R Sbjct: 300 KNVGNYGEVFERNIGQGSPLKIARGLNALWNKGGIQYAPPVR 341 >gi|307309254|ref|ZP_07588922.1| cationic amino acid ABC transporter, periplasmic binding protein [Sinorhizobium meliloti BL225C] gi|306900255|gb|EFN30872.1| cationic amino acid ABC transporter, periplasmic binding protein [Sinorhizobium meliloti BL225C] Length = 341 Score = 474 bits (1220), Expect = e-132, Method: Composition-based stats. Identities = 188/342 (54%), Positives = 267/342 (78%), Gaps = 1/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + +++ ++ + + +A+ L D+K +GF++CG+NTGL GFA A+G+W GFD Sbjct: 1 MARRILTALVGAAVVGIGTHAASAATLDDVKAKGFVQCGVNTGLAGFAAPDASGNWSGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+C+A+++AIF D SK++Y PL+AKERF ALQS ++D+L+RNT W++ R+ +LG FRP Sbjct: 61 VDYCKAIAAAIFGDGSKVKYTPLSAKERFPALQSGEVDVLARNTTWSINRDTALGFNFRP 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K+ + S +LSGA++CVQ GTTTEL LADYFKA+N++Y+P+VFE++E Sbjct: 121 VNYYDGQGFMVRKELDVKSALELSGAAVCVQTGTTTELNLADYFKANNLQYNPVVFEKLE 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E++AAY A RCD YT D S LY+L+LT +P +H++LP+IISK PLAPA+ QGD +W++I Sbjct: 181 EVNAAYDAGRCDVYTTDQSGLYSLRLTLSKPDDHIVLPEIISKEPLAPAVRQGDDQWFDI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 VSW HYA+V AEE G+T+ N+ ++ K +TNPDVQRFLG++ S IG LGLT +W I+ Sbjct: 241 VSWVHYALVQAEEFGVTRANLEEMKK-STNPDVQRFLGVEADSKIGTDLGLTNEWAVNIV 299 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+FDRN+G S LKI RG NALW+KGGL YAPP+R Sbjct: 300 KAVGNYGEVFDRNIGAGSPLKIERGLNALWNKGGLQYAPPVR 341 >gi|86357519|ref|YP_469411.1| general L-amino acid ABC transporter, substrate-binding protein [Rhizobium etli CFN 42] gi|86281621|gb|ABC90684.1| general L-amino acid ABC transporter, substrate-binding protein [Rhizobium etli CFN 42] Length = 348 Score = 473 bits (1219), Expect = e-131, Method: Composition-based stats. Identities = 187/342 (54%), Positives = 263/342 (76%), Gaps = 1/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + + + + +A+ LGD+K +GF++CG+NTGL GFA A+G+W GFD Sbjct: 8 MKNKLLSAAIGAAVFALGASAASATTLGDVKAKGFIQCGVNTGLAGFAAPDASGNWAGFD 67 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDFC+A++SA+F DP+K+++ PL+A RF ALQS +ID+L+RNT W++ R+ +LGL FR Sbjct: 68 VDFCKAVASAVFGDPTKVKFTPLSAANRFPALQSGEIDVLARNTTWSINRDTALGLNFRF 127 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K + S +LSGAS+CVQ+GTTTEL LADYFKA+N++Y+P+VFE+++ Sbjct: 128 VNYYDGQGFMVRKSLNVKSALELSGASVCVQSGTTTELNLADYFKANNLQYNPVVFEKLD 187 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E++AAY A RCD YT D S LY+L+LT P EH ILP+IISK PLAPA+ QGD +W++I Sbjct: 188 EVNAAYDAGRCDVYTTDQSGLYSLRLTLKNPDEHAILPEIISKEPLAPAVRQGDDQWFDI 247 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 VSW YAM+ AEE GITQ N++ + K++ NPD++RFLG++ + IG LGLT +W Y I+ Sbjct: 248 VSWVGYAMINAEEFGITQANVDDM-KNSPNPDIKRFLGVEADTKIGTDLGLTNEWAYNIV 306 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +++GNYGE+F+RN+G S LKI RG NALWSKGG+ YAPP+R Sbjct: 307 KNVGNYGEVFERNIGQGSPLKIARGLNALWSKGGIQYAPPVR 348 >gi|150396327|ref|YP_001326794.1| cationic amino acid ABC transporter periplasmic binding protein [Sinorhizobium medicae WSM419] gi|150027842|gb|ABR59959.1| cationic amino acid ABC transporter, periplasmic binding protein [Sinorhizobium medicae WSM419] Length = 341 Score = 473 bits (1219), Expect = e-131, Method: Composition-based stats. Identities = 188/342 (54%), Positives = 267/342 (78%), Gaps = 1/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + +++ ++ S++ +A+ L D+K +GF++CG+NTGL GFA A+GDW GFD Sbjct: 1 MARTILTALVSAAVMGVGSYAASAATLDDVKAKGFVQCGVNTGLAGFAAPNASGDWSGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+C+A+++A+F D +K++Y PL+AKERF ALQS ++D+L+RNT W++ R+ +LG FRP Sbjct: 61 VDYCKAIAAAVFGDATKVKYTPLSAKERFPALQSGEVDVLARNTTWSINRDTALGFNFRP 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K+ + S +LSGA++CVQ GTTTEL LADYFKA+N++Y+P+VFE++E Sbjct: 121 VNYYDGQGFMVRKELDVKSALELSGAAVCVQTGTTTELNLADYFKANNLQYNPVVFEKLE 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E++AAY A RCD YT D S LY+L+LT +P +H++LP+IISK PLAPA+ QGD +W++I Sbjct: 181 EVNAAYDAGRCDVYTTDQSGLYSLRLTLSKPDDHIVLPEIISKEPLAPAVRQGDDQWFDI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 VSW HYA+V AEE G+TQ N+ ++ K + NPDVQRFLG++ S IG LGLT +W I+ Sbjct: 241 VSWVHYALVQAEEFGVTQANVEEMKK-SANPDVQRFLGVEADSKIGTDLGLTNEWAVNIV 299 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+FDRN+G S LKI RG NALW+KGGL YAPP+R Sbjct: 300 KAVGNYGEVFDRNIGAGSPLKIERGLNALWNKGGLQYAPPVR 341 >gi|222085840|ref|YP_002544371.1| general L-amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221723288|gb|ACM26444.1| general L-amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 344 Score = 469 bits (1207), Expect = e-130, Method: Composition-based stats. Identities = 183/342 (53%), Positives = 267/342 (78%), Gaps = 1/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L L ++ +AS L D+K +GF++CG+NT L+GF++ A+G++ GFD Sbjct: 4 MKKIALSAFLGAAALAYSVSGASASTLSDVKAKGFVQCGVNTALLGFSQPDASGNYSGFD 63 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD C+A+++A+F D +K++Y L++K+RF ALQS +ID+LSRNT WTL R+ +LGL FRP Sbjct: 64 VDMCKAVAAAVFGDVTKVKYTALSSKDRFTALQSGEIDLLSRNTTWTLNRDTALGLNFRP 123 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DGQGF++ K+ + S +LSGA++CVQ+GTTTEL LADYFK++N++Y+P+VF+++E Sbjct: 124 VTYYDGQGFMVRKELNVKSALELSGAAVCVQSGTTTELNLADYFKSNNLQYNPVVFDKLE 183 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E++AAY + RCD YT D S LY+L+LT P ++V+LP+IISK PL PA+ QGD +W++I Sbjct: 184 EVNAAYDSGRCDVYTTDQSGLYSLRLTLKNPDDNVVLPEIISKEPLGPAVRQGDDQWFDI 243 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V+WT YA++ AEE GITQKN++++ K + NPD++RFLG ++ S +G +GLT DW Y +I Sbjct: 244 VTWTAYALINAEEFGITQKNVDEM-KSSANPDIKRFLGAEQGSTLGTDMGLTNDWAYNVI 302 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+FDRN+G S LKI RG NALW+KGG+ YAPP+R Sbjct: 303 KGVGNYGEVFDRNIGAGSPLKIARGLNALWNKGGIQYAPPVR 344 >gi|239831564|ref|ZP_04679893.1| lysine-arginine-ornithine-binding periplasmic protein [Ochrobactrum intermedium LMG 3301] gi|239823831|gb|EEQ95399.1| lysine-arginine-ornithine-binding periplasmic protein [Ochrobactrum intermedium LMG 3301] Length = 360 Score = 469 bits (1207), Expect = e-130, Method: Composition-based stats. Identities = 185/344 (53%), Positives = 251/344 (72%), Gaps = 3/344 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L LF + +A L D+K +GFL+CG+NTGL+GF+ G+W GFD Sbjct: 18 MKKTLMTGVLGAAALFCVASGASADTLSDVKAKGFLQCGVNTGLLGFSSPNDKGEWSGFD 77 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+CRA++SAIF DP+K+++ PLNAKERF ALQS +ID+L RNT WT+ R+ +LGL F Sbjct: 78 VDYCRAVASAIFGDPAKVKFTPLNAKERFTALQSGEIDVLIRNTTWTISRDTALGLDFAG 137 Query: 121 ITYFDGQGFIM--HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I YFDGQGF++ K GI+S QLSGASICVQAGTTTE+ +ADYF+A+ M+Y+P+VFE+ Sbjct: 138 INYFDGQGFMINSKKLSGINSALQLSGASICVQAGTTTEMNMADYFRANKMEYNPVVFEK 197 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +EE +AAY + RCDAYT D S+LY ++L P +HVILP+IISK P + QGD++W Sbjct: 198 IEEANAAYDSGRCDAYTTDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDSKWT 257 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298 ++V W H A++ AEE GITQ N+ ++ K + NPD++R LG++ + IG LGL DW + Sbjct: 258 DVVRWVHNALLNAEEYGITQANVEEMKK-SDNPDIKRLLGVEADTKIGTDLGLENDWVVK 316 Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 II+ +GNYGE+F+RN+G+ S LKI RG NA W+KGGL Y P+R Sbjct: 317 IIKGVGNYGEIFERNIGSGSPLKIARGINAQWNKGGLQYGIPVR 360 >gi|153009884|ref|YP_001371099.1| cationic amino acid ABC transporter periplasmic-binding protein [Ochrobactrum anthropi ATCC 49188] gi|151561772|gb|ABS15270.1| cationic amino acid ABC transporter, periplasmic binding protein [Ochrobactrum anthropi ATCC 49188] Length = 343 Score = 466 bits (1199), Expect = e-129, Method: Composition-based stats. Identities = 186/344 (54%), Positives = 251/344 (72%), Gaps = 3/344 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L LF + +A L D+K +GFL+CG+NTGL+GFA G+W GFD Sbjct: 1 MKKTLMTGVLGAAALFSVASGASADTLSDVKAKGFLQCGVNTGLLGFASPNDKGEWSGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+CRA++SAIF DP+K+++ PLNAKERF ALQS ++D+L RNT WT+ R+ +LGL F Sbjct: 61 VDYCRAVASAIFGDPTKVKFTPLNAKERFTALQSGEVDVLIRNTTWTISRDTALGLDFAG 120 Query: 121 ITYFDGQGFIM--HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I YFDGQGF++ K GI+S QLSGASICVQAGTTTEL +ADYF+A+ M+Y+P+VFE+ Sbjct: 121 INYFDGQGFMINSKKLSGINSALQLSGASICVQAGTTTELNMADYFRANKMEYNPVVFEK 180 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +EE +AAY + RCDAYT D S+LY ++L P +HVILP+IISK P + QGD++W Sbjct: 181 IEEANAAYDSGRCDAYTTDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDSKWA 240 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298 ++V WTH A++ AEE GITQ N+ ++ K + NPD++R LG++ + IG LGL DW + Sbjct: 241 DVVRWTHNALLNAEEYGITQANVEEMKK-SDNPDIKRLLGVEADTKIGTDLGLDNDWVVK 299 Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I++ +GNYGE+F+RN+G S LKI RG NA W+KGGL Y P+R Sbjct: 300 IVKGVGNYGEIFERNIGASSPLKIARGINAQWNKGGLQYGVPVR 343 >gi|23501628|ref|NP_697755.1| amino acid ABC transporter periplasmic amino acid-binding protein [Brucella suis 1330] gi|148560716|ref|YP_001258723.1| amino acid ABC transporter periplasmic amino acid-binding protein [Brucella ovis ATCC 25840] gi|161618711|ref|YP_001592598.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella canis ATCC 23365] gi|163843013|ref|YP_001627417.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella suis ATCC 23445] gi|225627243|ref|ZP_03785280.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella ceti str. Cudo] gi|254704068|ref|ZP_05165896.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella suis bv. 3 str. 686] gi|254718861|ref|ZP_05180672.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella sp. 83/13] gi|256060862|ref|ZP_05451022.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella neotomae 5K33] gi|256369174|ref|YP_003106682.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella microti CCM 4915] gi|260168486|ref|ZP_05755297.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella sp. F5/99] gi|260566684|ref|ZP_05837154.1| cationic amino acid ABC transporter [Brucella suis bv. 4 str. 40] gi|261324858|ref|ZP_05964055.1| cationic amino acid ABC transporter [Brucella neotomae 5K33] gi|261754726|ref|ZP_05998435.1| cationic amino acid ABC transporter [Brucella suis bv. 3 str. 686] gi|261757954|ref|ZP_06001663.1| cationic amino acid ABC transporter [Brucella sp. F5/99] gi|265983846|ref|ZP_06096581.1| cationic amino acid ABC transporter [Brucella sp. 83/13] gi|306837636|ref|ZP_07470506.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella sp. NF 2653] gi|306842009|ref|ZP_07474682.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella sp. BO2] gi|306843688|ref|ZP_07476288.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella sp. BO1] gi|23347545|gb|AAN29670.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella suis 1330] gi|148371973|gb|ABQ61952.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella ovis ATCC 25840] gi|161335522|gb|ABX61827.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella canis ATCC 23365] gi|163673736|gb|ABY37847.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella suis ATCC 23445] gi|225617248|gb|EEH14293.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella ceti str. Cudo] gi|255999334|gb|ACU47733.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella microti CCM 4915] gi|260156202|gb|EEW91282.1| cationic amino acid ABC transporter [Brucella suis bv. 4 str. 40] gi|261300838|gb|EEY04335.1| cationic amino acid ABC transporter [Brucella neotomae 5K33] gi|261737938|gb|EEY25934.1| cationic amino acid ABC transporter [Brucella sp. F5/99] gi|261744479|gb|EEY32405.1| cationic amino acid ABC transporter [Brucella suis bv. 3 str. 686] gi|264662438|gb|EEZ32699.1| cationic amino acid ABC transporter [Brucella sp. 83/13] gi|306275998|gb|EFM57707.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella sp. BO1] gi|306287850|gb|EFM59270.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella sp. BO2] gi|306407285|gb|EFM63494.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella sp. NF 2653] Length = 343 Score = 465 bits (1196), Expect = e-129, Method: Composition-based stats. Identities = 189/344 (54%), Positives = 252/344 (73%), Gaps = 3/344 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L LF + +A L D+K +GFL+CG+NTGL+GFA G+W GFD Sbjct: 1 MKKTLMTGVLGAAALFGIASGASADTLSDVKAKGFLQCGVNTGLLGFASPNDKGEWSGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+CRA++SAIF DP+K+++ PLNAKERF ALQS ++D+L RNT WT+ R+ SLGL F Sbjct: 61 VDYCRAVASAIFGDPTKVKFTPLNAKERFTALQSGEVDVLIRNTTWTISRDTSLGLDFAG 120 Query: 121 ITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I Y+DGQGF+++ KK GI+S QLSGASICVQAGTTTEL +ADYF+A+ M+Y+P+VFE+ Sbjct: 121 INYYDGQGFMINSKKLAGINSALQLSGASICVQAGTTTELNMADYFRANKMEYNPVVFEK 180 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +EE +AAY + RCDAYT D S+LY ++L P +HVILP+IISK P + QGD W Sbjct: 181 IEEANAAYDSGRCDAYTTDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDARWA 240 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298 ++V WTH A++ AEE GITQ N+ ++ K + NPD++R LG + + IG LGL KDW + Sbjct: 241 DVVRWTHNALLNAEEYGITQANVEEMKK-SDNPDIKRLLGAEADTKIGTDLGLDKDWVVK 299 Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 II+ +GNYGE+F+RN+G+ S LKI RG NA W+KGGL Y P+R Sbjct: 300 IIKGVGNYGEIFERNIGSGSPLKIARGLNAQWNKGGLQYGIPVR 343 >gi|254709861|ref|ZP_05171672.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella pinnipedialis B2/94] gi|256031353|ref|ZP_05444967.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella pinnipedialis M292/94/1] gi|261317400|ref|ZP_05956597.1| cationic amino acid ABC transporter [Brucella pinnipedialis B2/94] gi|265988437|ref|ZP_06100994.1| cationic amino acid ABC transporter [Brucella pinnipedialis M292/94/1] gi|261296623|gb|EEY00120.1| cationic amino acid ABC transporter [Brucella pinnipedialis B2/94] gi|264660634|gb|EEZ30895.1| cationic amino acid ABC transporter [Brucella pinnipedialis M292/94/1] Length = 343 Score = 465 bits (1196), Expect = e-129, Method: Composition-based stats. Identities = 189/344 (54%), Positives = 252/344 (73%), Gaps = 3/344 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L LF + +A L D+K +GFL+CG+NTGL+GFA G+W GFD Sbjct: 1 MKKTLMTGVLGAAALFGIASGASADTLSDVKAKGFLQCGVNTGLLGFASPNNKGEWSGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+CRA++SAIF DP+K+++ PLNAKERF ALQS ++D+L RNT WT+ R+ SLGL F Sbjct: 61 VDYCRAVASAIFGDPTKVKFTPLNAKERFTALQSGEVDVLIRNTTWTISRDTSLGLDFAG 120 Query: 121 ITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I Y+DGQGF+++ KK GI+S QLSGASICVQAGTTTEL +ADYF+A+ M+Y+P+VFE+ Sbjct: 121 INYYDGQGFMINSKKLAGINSALQLSGASICVQAGTTTELNMADYFRANKMEYNPVVFEK 180 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +EE +AAY + RCDAYT D S+LY ++L P +HVILP+IISK P + QGD W Sbjct: 181 IEEANAAYDSGRCDAYTTDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDARWA 240 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298 ++V WTH A++ AEE GITQ N+ ++ K + NPD++R LG + + IG LGL KDW + Sbjct: 241 DVVRWTHNALLNAEEYGITQANVEEMKK-SDNPDIKRLLGAEADTKIGTDLGLDKDWVVK 299 Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 II+ +GNYGE+F+RN+G+ S LKI RG NA W+KGGL Y P+R Sbjct: 300 IIKGVGNYGEIFERNIGSGSPLKIARGLNAQWNKGGLQYGIPVR 343 >gi|325292970|ref|YP_004278834.1| general L-amino acid-binding periplasmic protein AapJ precursor [Agrobacterium sp. H13-3] gi|325060823|gb|ADY64514.1| general L-amino acid-binding periplasmic protein AapJ precursor [Agrobacterium sp. H13-3] Length = 340 Score = 464 bits (1195), Expect = e-129, Method: Composition-based stats. Identities = 172/342 (50%), Positives = 250/342 (73%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ +L S +A+ L D+K +GF+ CG++ G+ GF+ G+W G D Sbjct: 1 MKKAILSAVIGAAVLGGASV-ASAATLQDVKSKGFVTCGVSAGIPGFSNPDDKGEWSGID 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+CR +++A+F DP+K +++ L++K+RF ALQS ++D+L+RNT WT+ R+ SLG FR Sbjct: 60 VDYCRGIATAVFGDPTKAKFVALSSKDRFPALQSGEVDVLTRNTTWTISRDTSLGFNFRT 119 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGFI K + S +LSGA++CVQ GTTTEL LADYFK +N++Y+P+VFE+ Sbjct: 120 VNYYDGQGFIAKKGLNVKSALELSGAAVCVQTGTTTELNLADYFKTNNLQYNPVVFEKES 179 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + +AY + RCD YT D S LYA++L P ++++LP++ISK PL PA+ QGD +W++I Sbjct: 180 DATSAYDSGRCDVYTTDQSGLYAIRLKLKNPDDNIVLPEVISKEPLGPAVRQGDDQWFDI 239 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V+W HYAMV AEELGIT KN+++ K++ NPD++R LG ++ + IG LG+T DW Y I+ Sbjct: 240 VTWVHYAMVNAEELGITSKNVDE-QKNSANPDIKRLLGTEEGTKIGTDLGVTNDWAYNIV 298 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+FDRN+G S LKI RG NALW+KGGL YAPP+R Sbjct: 299 KKVGNYGEVFDRNVGAGSPLKIERGQNALWTKGGLQYAPPVR 340 >gi|254713861|ref|ZP_05175672.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella ceti M644/93/1] gi|254717082|ref|ZP_05178893.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella ceti M13/05/1] gi|261218893|ref|ZP_05933174.1| cationic amino acid ABC transporter [Brucella ceti M13/05/1] gi|261321608|ref|ZP_05960805.1| cationic amino acid ABC transporter [Brucella ceti M644/93/1] gi|260923982|gb|EEX90550.1| cationic amino acid ABC transporter [Brucella ceti M13/05/1] gi|261294298|gb|EEX97794.1| cationic amino acid ABC transporter [Brucella ceti M644/93/1] Length = 343 Score = 462 bits (1189), Expect = e-128, Method: Composition-based stats. Identities = 188/344 (54%), Positives = 251/344 (72%), Gaps = 3/344 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L LF + +A L D+K +GFL+CG+NTGL+GFA G+W GFD Sbjct: 1 MKKTLMTGVLGAAALFGIASGASADTLSDVKAKGFLQCGVNTGLLGFASPNDKGEWSGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+CRA++SAIF DP+K+++ PLNAKERF ALQS ++D+L RNT WT+ R+ SLGL F Sbjct: 61 VDYCRAVASAIFGDPTKVKFTPLNAKERFTALQSGEVDVLIRNTTWTISRDTSLGLDFAG 120 Query: 121 ITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I Y+DGQGF+++ KK GI+S QLSGASICVQ GTTTEL +ADYF+A+ M+Y+P+VFE+ Sbjct: 121 INYYDGQGFMINSKKLAGINSALQLSGASICVQVGTTTELNMADYFRANKMEYNPVVFEK 180 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +EE +AAY + RCDAYT D S+LY ++L P +HVILP+IISK P + QGD W Sbjct: 181 IEEANAAYDSGRCDAYTTDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDARWA 240 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298 ++V WTH A++ AEE GITQ N+ ++ K + NPD++R LG + + IG LGL KDW + Sbjct: 241 DVVRWTHNALLNAEEYGITQANVEEMKK-SDNPDIKRLLGAEADTKIGTDLGLDKDWVVK 299 Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 II+ +GNYGE+F+RN+G+ S LKI RG NA W+KGGL Y P+R Sbjct: 300 IIKGVGNYGEIFERNIGSGSPLKIARGLNAEWNKGGLQYGIPVR 343 >gi|17987494|ref|NP_540128.1| general L-amino acid-binding periplasmic protein AAPJ precursor [Brucella melitensis bv. 1 str. 16M] gi|254689006|ref|ZP_05152260.1| general L-amino acid-binding periplasmic protein AAPJ precursor [Brucella abortus bv. 6 str. 870] gi|254693490|ref|ZP_05155318.1| general L-amino acid-binding periplasmic protein AAPJ precursor [Brucella abortus bv. 3 str. Tulya] gi|256044431|ref|ZP_05447335.1| general L-amino acid-binding periplasmic protein AAPJ precursor [Brucella melitensis bv. 1 str. Rev.1] gi|256113275|ref|ZP_05454143.1| general L-amino acid-binding periplasmic protein AAPJ precursor [Brucella melitensis bv. 3 str. Ether] gi|256257256|ref|ZP_05462792.1| general L-amino acid-binding periplasmic protein AAPJ precursor [Brucella abortus bv. 9 str. C68] gi|260563783|ref|ZP_05834269.1| cationic amino acid ABC transporter [Brucella melitensis bv. 1 str. 16M] gi|260754500|ref|ZP_05866848.1| cationic amino acid ABC transporter [Brucella abortus bv. 6 str. 870] gi|260883528|ref|ZP_05895142.1| cationic amino acid ABC transporter [Brucella abortus bv. 9 str. C68] gi|261213748|ref|ZP_05928029.1| cationic amino acid ABC transporter [Brucella abortus bv. 3 str. Tulya] gi|265990852|ref|ZP_06103409.1| cationic amino acid ABC transporter [Brucella melitensis bv. 1 str. Rev.1] gi|265994687|ref|ZP_06107244.1| cationic amino acid ABC transporter [Brucella melitensis bv. 3 str. Ether] gi|297248104|ref|ZP_06931822.1| general L-amino acid transport system substrate-binding protein [Brucella abortus bv. 5 str. B3196] gi|17983192|gb|AAL52392.1| general l-amino acid-binding periplasmic protein aapj precursor [Brucella melitensis bv. 1 str. 16M] gi|260153799|gb|EEW88891.1| cationic amino acid ABC transporter [Brucella melitensis bv. 1 str. 16M] gi|260674608|gb|EEX61429.1| cationic amino acid ABC transporter [Brucella abortus bv. 6 str. 870] gi|260873056|gb|EEX80125.1| cationic amino acid ABC transporter [Brucella abortus bv. 9 str. C68] gi|260915355|gb|EEX82216.1| cationic amino acid ABC transporter [Brucella abortus bv. 3 str. Tulya] gi|262765800|gb|EEZ11589.1| cationic amino acid ABC transporter [Brucella melitensis bv. 3 str. Ether] gi|263001636|gb|EEZ14211.1| cationic amino acid ABC transporter [Brucella melitensis bv. 1 str. Rev.1] gi|297175273|gb|EFH34620.1| general L-amino acid transport system substrate-binding protein [Brucella abortus bv. 5 str. B3196] Length = 343 Score = 462 bits (1188), Expect = e-128, Method: Composition-based stats. Identities = 188/344 (54%), Positives = 251/344 (72%), Gaps = 3/344 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L LF + +A L D+K +GFL+CG+NTGL+GFA G+W GFD Sbjct: 1 MKKTLMTGVLGAAALFGIASGASADTLSDVKAKGFLQCGVNTGLLGFASPNDKGEWSGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+CRA++SAIF DP+K+++ PLNAKERF A QS ++D+L RNT WT+ R+ SLGL F Sbjct: 61 VDYCRAVASAIFGDPTKVKFTPLNAKERFTAFQSGEVDVLIRNTTWTISRDTSLGLDFAG 120 Query: 121 ITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I Y+DGQGF+++ KK GI+S QLSGASICVQAGTTTEL +ADYF+A+ M+Y+P+VFE+ Sbjct: 121 INYYDGQGFMINSKKLAGINSALQLSGASICVQAGTTTELNMADYFRANKMEYNPVVFEK 180 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +EE +AAY + RCDAYT D S+LY ++L P +HVILP+IISK P + QGD W Sbjct: 181 IEEANAAYDSGRCDAYTTDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDARWA 240 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298 ++V WTH A++ AEE GITQ N+ ++ K + NPD++R LG + + IG LGL KDW + Sbjct: 241 DVVRWTHNALLNAEEYGITQANVEEMKK-SDNPDIKRLLGAEADTKIGTDLGLDKDWVVK 299 Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 II+ +GNYGE+F+RN+G+ S LKI RG NA W+KGGL Y P+R Sbjct: 300 IIKGVGNYGEIFERNIGSGSPLKIARGLNAQWNKGGLQYGIPVR 343 >gi|256159474|ref|ZP_05457242.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella ceti M490/95/1] gi|256254760|ref|ZP_05460296.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella ceti B1/94] gi|261221938|ref|ZP_05936219.1| cationic amino acid ABC transporter [Brucella ceti B1/94] gi|265997901|ref|ZP_06110458.1| cationic amino acid ABC transporter [Brucella ceti M490/95/1] gi|260920522|gb|EEX87175.1| cationic amino acid ABC transporter [Brucella ceti B1/94] gi|262552369|gb|EEZ08359.1| cationic amino acid ABC transporter [Brucella ceti M490/95/1] Length = 343 Score = 462 bits (1188), Expect = e-128, Method: Composition-based stats. Identities = 187/344 (54%), Positives = 250/344 (72%), Gaps = 3/344 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L LF + +A L D+K +GFL+CG+NTGL+GFA G+W GFD Sbjct: 1 MKKTLMTGVLGAAALFGIASGASADTLSDVKAKGFLQCGVNTGLLGFASPNDKGEWSGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD CRA++SAIF DP+K+++ PLNAKERF ALQS ++D+L RNT WT+ R+ SLGL F Sbjct: 61 VDSCRAVASAIFGDPTKVKFTPLNAKERFTALQSGEVDVLIRNTTWTISRDTSLGLDFAG 120 Query: 121 ITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I Y+DGQGF+++ KK I+S QLSGASICVQAG+TTEL +ADYF+A+ M+Y+P+VFE+ Sbjct: 121 INYYDGQGFMINSKKLADINSALQLSGASICVQAGSTTELNMADYFRANKMEYNPVVFEK 180 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +EE +AAY + RCDAYT D S+LY ++L P +HVILP+IISK P + QGD W Sbjct: 181 IEEANAAYDSGRCDAYTTDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDARWA 240 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298 ++V WTH A++ AEE GITQ N+ ++ K + NPD++R LG + + IG LGL KDW + Sbjct: 241 DVVRWTHNALLNAEEYGITQANVEEMKK-SDNPDIKRLLGAEADTKIGTDLGLDKDWVVK 299 Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 II+ +GNYGE+F+RN+G+ S LKI RG NA W+KGGL Y P+R Sbjct: 300 IIKGVGNYGEIFERNIGSGSPLKIARGLNAQWNKGGLQYGIPVR 343 >gi|330504740|ref|YP_004381609.1| extracellular solute-binding protein [Pseudomonas mendocina NK-01] gi|328919026|gb|AEB59857.1| extracellular solute-binding protein [Pseudomonas mendocina NK-01] Length = 342 Score = 461 bits (1187), Expect = e-128, Method: Composition-based stats. Identities = 172/342 (50%), Positives = 240/342 (70%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + +L + F+ + L ++K+GF++CGI+ GL GF+ G++ G D Sbjct: 3 MVKSTLAVLTTAAVLGVSGFAQAGATLDAVQKKGFVQCGISDGLPGFSYADEKGNYLGLD 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD CRA+++A+F D +K++Y PL AKERF ALQS ++DILSRNT WT R+ +LGL F Sbjct: 63 VDVCRAVAAAVFGDATKVKYSPLTAKERFTALQSGEVDILSRNTTWTSSRDAALGLNFTG 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DGQGF+++KK G+SS +L GA++C+QAGTTTEL L+DYF+A+ MKY PI ++ + Sbjct: 123 VTYYDGQGFLVNKKLGVSSAKELDGATVCIQAGTTTELNLSDYFRANGMKYTPITYDTSD 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + A RCD T D S LYA ++ P ++V+LP++ISK PL P++ QGD EW++I Sbjct: 183 ESAKSVEAGRCDVLTSDQSQLYAQRIKLANPDDYVVLPEVISKEPLGPSVRQGDEEWFDI 242 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEELG+T N+ + +K T NPDV R LG + G+ L L KDW +I+ Sbjct: 243 VRWTLFAMLNAEELGVTSANVEETAKTTKNPDVARLLGAEGE--FGKDLKLPKDWAVQIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE FDRN+G SELKI RG NALW+KGGL YAPP+R Sbjct: 301 KQVGNYGESFDRNVGAGSELKIERGLNALWNKGGLQYAPPVR 342 >gi|225852259|ref|YP_002732492.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella melitensis ATCC 23457] gi|256264234|ref|ZP_05466766.1| cationic amino acid ABC transporter [Brucella melitensis bv. 2 str. 63/9] gi|225640624|gb|ACO00538.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella melitensis ATCC 23457] gi|263094479|gb|EEZ18301.1| cationic amino acid ABC transporter [Brucella melitensis bv. 2 str. 63/9] Length = 343 Score = 461 bits (1187), Expect = e-128, Method: Composition-based stats. Identities = 188/344 (54%), Positives = 250/344 (72%), Gaps = 3/344 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L LF + +A L D+K +GFL+CG+NTGL+GFA G+W GFD Sbjct: 1 MKKTLMTGVLGAAALFGIASGASADTLSDVKAKGFLQCGVNTGLLGFASPNDKGEWSGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+CRA++SAIF DP+K+++ PLNAKERF A QS ++D+L RNT WT+ R+ SLGL F Sbjct: 61 VDYCRAVASAIFGDPTKVKFTPLNAKERFTAFQSGEVDVLIRNTTWTISRDTSLGLDFAG 120 Query: 121 ITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I Y+DGQGF+++ KK GI+S QLSGASICVQAGTTTEL +ADYF+A+ M+Y+P VFE+ Sbjct: 121 INYYDGQGFMINSKKLAGINSALQLSGASICVQAGTTTELNMADYFRANKMEYNPAVFEK 180 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +EE +AAY + RCDAYT D S+LY ++L P +HVILP+IISK P + QGD W Sbjct: 181 IEEANAAYDSGRCDAYTTDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDARWA 240 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298 ++V WTH A++ AEE GITQ N+ ++ K + NPD++R LG + + IG LGL KDW + Sbjct: 241 DVVRWTHNALLNAEEYGITQANVEEMKK-SDNPDIKRLLGAEADTKIGTDLGLDKDWVVK 299 Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 II+ +GNYGE+F+RN+G+ S LKI RG NA W+KGGL Y P+R Sbjct: 300 IIKGVGNYGEIFERNIGSGSPLKIARGLNAQWNKGGLQYGIPVR 343 >gi|146308575|ref|YP_001189040.1| extracellular solute-binding protein [Pseudomonas mendocina ymp] gi|145576776|gb|ABP86308.1| amino acid ABC transporter substrate-binding protein, PAAT family [Pseudomonas mendocina ymp] Length = 342 Score = 459 bits (1182), Expect = e-127, Method: Composition-based stats. Identities = 171/342 (50%), Positives = 237/342 (69%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + +L + F+ + L ++K+GF++CGI+ GL GF+ G++ G D Sbjct: 3 MVKSTLAVLTTAAVLGVSGFAQAGATLDAVQKKGFVQCGISDGLPGFSYADEKGNYLGLD 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD CRA+++A+F D +K++Y PL AKERF ALQS ++DILSRNT WT R+ LGL F Sbjct: 63 VDVCRAVAAAVFGDATKVKYSPLTAKERFTALQSGEVDILSRNTTWTSSRDSGLGLNFAG 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF+++KK G+SS +L GA++C+QAGTTTEL L+DYF+A+ +KY PI ++ + Sbjct: 123 VNYYDGQGFLVNKKLGVSSAKELDGATVCIQAGTTTELNLSDYFRANGLKYTPITYDTSD 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + A RCD T D S LYA ++ P ++V+LP++ISK PL P + QGD EW+NI Sbjct: 183 ESAKSVEAGRCDVLTSDQSQLYAQRIKLANPDDYVVLPEVISKEPLGPVVRQGDDEWFNI 242 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V W+ +AMV AEELG+T N+ + +K T NPDV R LG + G+ L L KDW +I+ Sbjct: 243 VRWSLFAMVNAEELGVTSANVEETAKTTKNPDVARLLGAEGE--FGKDLKLPKDWAVQIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE FDRN+G SELKI RG NALW+KGGL YAPP+R Sbjct: 301 KQVGNYGESFDRNVGAGSELKIERGLNALWNKGGLQYAPPVR 342 >gi|83648448|ref|YP_436883.1| amino acid ABC transporter periplasmic protein [Hahella chejuensis KCTC 2396] gi|83636491|gb|ABC32458.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Hahella chejuensis KCTC 2396] Length = 339 Score = 459 bits (1181), Expect = e-127, Method: Composition-based stats. Identities = 170/342 (49%), Positives = 236/342 (69%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F ++ L + T + L +KK+GF++CG++TGL GF+ G+W G D Sbjct: 1 MKKTFVSAVAALGFMTATGAAMADGTLDAVKKKGFVQCGVSTGLPGFSNPDDKGNWMGLD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD CRA+++A D SK++Y+PL AKERF ALQS +ID+LSRNT WTL R+ SLGL F Sbjct: 61 VDLCRAVAAATLGDASKVKYIPLTAKERFTALQSGEIDLLSRNTTWTLTRDGSLGLNFAG 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K G+ S +L GA++C+QAGTTTEL LADYF+ MKY P+VF+ + Sbjct: 121 VNYYDGQGFLVSKDLGVKSAKELDGAAVCIQAGTTTELNLADYFREFGMKYQPVVFDTSD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + + A RCD T D S LYAL++ P + ++LP++ISK PL P + QGD +W+NI Sbjct: 181 QTVKGFEAGRCDVLTSDQSQLYALRIQLSNPDKAMVLPEVISKEPLGPVVRQGDDQWFNI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V W+ +A +TAEELG++ N++++ K +TNP+VQR LG + G+ LGL W + I+ Sbjct: 241 VKWSLFAAITAEELGVSSDNVDKM-KSSTNPNVQRLLGAEAGQ--GKNLGLDDTWAFNIV 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGEMF+RN+G S L I RG NALW+KGGL YAPPIR Sbjct: 298 KQVGNYGEMFERNVGKSSPLGIERGLNALWTKGGLQYAPPIR 339 >gi|260463341|ref|ZP_05811542.1| cationic amino acid ABC transporter, periplasmic binding protein [Mesorhizobium opportunistum WSM2075] gi|259030931|gb|EEW32206.1| cationic amino acid ABC transporter, periplasmic binding protein [Mesorhizobium opportunistum WSM2075] Length = 430 Score = 457 bits (1176), Expect = e-126, Method: Composition-based stats. Identities = 184/343 (53%), Positives = 263/343 (76%), Gaps = 3/343 (0%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K + IL L + + +A+ L +K +GF++CG++TGL GF+ GDW+G D Sbjct: 89 MKHIAIGILGAAALGLMASAASATTLDTVKAKGFIQCGVSTGLAGFSAPDDKGDWQGIDA 148 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 DFCRA+++A+F D +K+++ PL+AKERF ALQS ++DILSRNT WT+ R+ +LGL F + Sbjct: 149 DFCRAVAAAVFGDGTKVKFTPLSAKERFTALQSGEVDILSRNTTWTINRDTALGLNFIGV 208 Query: 122 TYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 TY+DGQGF+++ KK G++S QLSGA++CVQ+GTTTEL LADYFKA+ M+Y+P+VFE++ Sbjct: 209 TYYDGQGFMINAKKLPGVNSALQLSGAAVCVQSGTTTELNLADYFKANKMEYNPVVFEKL 268 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 EE++AAY A RCD YT D S LY ++LT P++HV+LP+IISK PL PA+ QGD +WY+ Sbjct: 269 EEVNAAYDAGRCDVYTTDQSGLYGIRLTLGSPADHVVLPEIISKEPLGPAVRQGDDQWYH 328 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT++A++ AEELGIT+ N++++ K++ +P+++R LG + + IG LG++ DW I Sbjct: 329 IVKWTYFALLDAEELGITKANVDEM-KNSASPEIKRVLGQEADTKIGTDLGVSNDWVVNI 387 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++ +GNYGEMFDRN+G+ S LKI RG NALW+KGGL YAPPIR Sbjct: 388 VKAVGNYGEMFDRNVGSGSPLKIARGINALWTKGGLQYAPPIR 430 >gi|298291387|ref|YP_003693326.1| cationic amino acid ABC transporter periplasmic protein [Starkeya novella DSM 506] gi|296927898|gb|ADH88707.1| cationic amino acid ABC transporter, periplasmic binding protein [Starkeya novella DSM 506] Length = 339 Score = 456 bits (1173), Expect = e-126, Method: Composition-based stats. Identities = 164/341 (48%), Positives = 230/341 (67%), Gaps = 2/341 (0%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K + + S A+ L +K +GF++CG++ GL GF+ G+W G DV Sbjct: 1 MKRLLSTFAIAGAFGLCAVSAQAAKLDQVKSKGFIQCGVSQGLPGFSTPDDKGNWTGLDV 60 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 DFCRA+++A+F+DP+K+++ PL+AK+RF ALQS IDILSRNT WT+ R+ SLGL F + Sbjct: 61 DFCRAVAAAVFNDPTKVKFTPLSAKDRFTALQSGDIDILSRNTTWTITRDTSLGLNFTGV 120 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 TY+DGQGF++ K K ++S +LSGAS+C Q GTTTE LADYF+A+NM Y I F +E Sbjct: 121 TYYDGQGFMIRKDKKVNSALELSGASVCTQTGTTTEQNLADYFRANNMTYEVIAFATNDE 180 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + AY A RCD T D S L +L P +HV+LP+IISK PL P + GD +W++IV Sbjct: 181 VVKAYDAGRCDVLTTDRSGLAGERLKLTNPDDHVVLPEIISKEPLGPVVAHGDDQWFDIV 240 Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301 W +A + AEELG+T KN+++ K TNP+++R +G + GE +G+ DW Y++I+ Sbjct: 241 KWVLFAQINAEELGVTSKNVDEQLKSATNPEIKRLVGTEG--KFGEGMGIGNDWAYQVIK 298 Query: 302 HMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGEM+DRN+G + LK+ RG NALW+KGG Y PIR Sbjct: 299 GVGNYGEMYDRNVGPATPLKLERGANALWTKGGQQYGMPIR 339 >gi|327479738|gb|AEA83048.1| extracellular solute-binding protein [Pseudomonas stutzeri DSM 4166] Length = 342 Score = 455 bits (1172), Expect = e-126, Method: Composition-based stats. Identities = 165/326 (50%), Positives = 236/326 (72%), Gaps = 2/326 (0%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 + + + L ++K+GF++CGI+ GL GF+ A G ++G DVD CRA+++A+F D + Sbjct: 19 ISGLAQAGATLDAVQKKGFVQCGISDGLPGFSFADAKGQFQGIDVDVCRAVAAAVFGDAT 78 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 K++Y PL AKERF ALQS ++D+LSRNT WT R+ ++GL F +TY+DGQGF+++K+ G Sbjct: 79 KVKYSPLTAKERFTALQSGEVDVLSRNTTWTSSRDAAMGLNFTGVTYYDGQGFLVNKELG 138 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 +SS +L GA++C+QAGTTTEL L+DYF+A+ KY PI ++ +E + + RCD T Sbjct: 139 VSSAKELDGATVCIQAGTTTELNLSDYFRANGHKYTPITYDTSDESAKSLESGRCDVLTS 198 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 D S LYA ++ +P ++V+LP++ISK PL PA+ QGD EW++IV WT +AM+ AEELG+ Sbjct: 199 DQSQLYAQRIKLAKPDDYVVLPEVISKEPLGPAVRQGDEEWFDIVRWTLFAMLNAEELGV 258 Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316 T N+ ++K T NPDV R LG + G+ L L KDW +I++ +GNYGE+FDRN+G Sbjct: 259 TSANVEDMAKSTKNPDVARLLGAEGE--YGKDLRLPKDWAVQIVKQVGNYGEIFDRNVGA 316 Query: 317 QSELKIPRGYNALWSKGGLMYAPPIR 342 SELKI RG NALW+KGGL YAPP+R Sbjct: 317 GSELKIERGLNALWNKGGLQYAPPVR 342 >gi|13476741|ref|NP_108310.1| ABC transporter, amino acid binding protein [Mesorhizobium loti MAFF303099] gi|14027502|dbj|BAB53771.1| ABC transporter, amino acid binding protein [Mesorhizobium loti MAFF303099] Length = 342 Score = 455 bits (1170), Expect = e-126, Method: Composition-based stats. Identities = 185/343 (53%), Positives = 263/343 (76%), Gaps = 3/343 (0%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K + IL L F + + +A+ L +K +GF++CG++TGL GF+ GDW+G D Sbjct: 1 MKHIAIGILGAATLGFMASAASATTLDTVKAKGFIQCGVSTGLAGFSAPDDKGDWQGIDA 60 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 DFCRA+++A+F D +K+++ PL+AKERF ALQS ++DILSRNT WT+ R+ +LGL F Sbjct: 61 DFCRAVAAAVFGDGTKVKFTPLSAKERFTALQSGEVDILSRNTTWTINRDTALGLNFVGT 120 Query: 122 TYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 TY+DGQGF+++ KK G++S QLSGA++CVQ+GTTTEL LADYFKA+ M+Y+P+VFE++ Sbjct: 121 TYYDGQGFMINAKKLPGVNSALQLSGAAVCVQSGTTTELNLADYFKANKMEYNPVVFEKL 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 EE++AAY A RCD YT D S LY ++LT P++HV+LP+IISK PL PA+ QGD +WY+ Sbjct: 181 EEVNAAYDAGRCDVYTTDQSGLYGIRLTLGSPADHVVLPEIISKEPLGPAVRQGDDQWYH 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT++A++ AEELGIT+ N++++ K++ +P+++R LG + + IG LG++ DW I Sbjct: 241 IVKWTYFALLDAEELGITKANVDEM-KNSASPEIKRVLGQEADTKIGADLGVSNDWVVNI 299 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++ +GNYGEMFDRN+G+ S LKI RG NALW+KGGL YAPPIR Sbjct: 300 VKAVGNYGEMFDRNVGSGSPLKIARGINALWTKGGLQYAPPIR 342 >gi|158423209|ref|YP_001524501.1| extracellular solute-binding protein [Azorhizobium caulinodans ORS 571] gi|158330098|dbj|BAF87583.1| extracellular solute-binding protein [Azorhizobium caulinodans ORS 571] Length = 336 Score = 454 bits (1168), Expect = e-125, Method: Composition-based stats. Identities = 174/342 (50%), Positives = 239/342 (69%), Gaps = 6/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + I +L T+ + A L D+K RG L CG++ GL GF+ G+WKG D Sbjct: 1 MKRIL---IAVAGVLALTAGAAKAGTLDDVKARGALNCGVSQGLPGFSSPDDKGNWKGLD 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDFCRA+++AIF+DP+K+++ PL+AK+RF ALQS ID+LSRNT WT+ R+ +LG F Sbjct: 58 VDFCRAVAAAIFNDPNKVRFTPLSAKDRFTALQSGAIDLLSRNTTWTMSRDTTLGFNFAG 117 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGFI+ K I S +L+GASICVQAGTTTEL L D+F+A+NMKY I F + Sbjct: 118 VMYYDGQGFIVRKSLNIKSAKELNGASICVQAGTTTELNLGDFFRANNMKYEVITFSTED 177 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E AY + RCD++T D S +YA+KL ++HV+LP++ISK PL P + GD +W+++ Sbjct: 178 ETVKAYESGRCDSFTSDQSQIYAIKLKLTNAADHVVLPELISKEPLGPLVRHGDDQWFDL 237 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT+YA++ +EELG++QK ++Q S +TNP+++R LG D GE +GLT DW RII Sbjct: 238 VKWTYYALLNSEELGVSQKTLDQ-SMTSTNPEIKRLLGTDG--KFGEGIGLTNDWVVRII 294 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+FDRN+G S L I RG N LW+KGGL Y PIR Sbjct: 295 KAVGNYGEIFDRNVGTGSPLGIDRGENKLWNKGGLQYGMPIR 336 >gi|319784340|ref|YP_004143816.1| cationic amino acid ABC transporter periplasmic binding protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170228|gb|ADV13766.1| cationic amino acid ABC transporter, periplasmic binding protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 342 Score = 453 bits (1167), Expect = e-125, Method: Composition-based stats. Identities = 184/343 (53%), Positives = 263/343 (76%), Gaps = 3/343 (0%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K + IL L + + +A+ L +K +GF++CG++TGL GF+ GDW+G D Sbjct: 1 MKHIAIGILGAATLGLMASAASAATLDTVKAKGFIQCGVSTGLAGFSAPDDKGDWQGIDA 60 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 DFCRA+++A+F D S++++ PL+AKERF ALQS +IDILSRNT WT+ R+ +LGL F + Sbjct: 61 DFCRAVAAAVFGDGSRVKFTPLSAKERFTALQSGEIDILSRNTTWTINRDTALGLNFIGV 120 Query: 122 TYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 TY+DGQGF+++ KK G++S QLSGA++CVQ+GTTTEL LADYFKA+ M+Y+P+VFE++ Sbjct: 121 TYYDGQGFMINAKKLPGVNSALQLSGAAVCVQSGTTTELNLADYFKANKMEYNPVVFEKL 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 EE++AAY A RCD YT D S LY ++LT P++HV+LP+IISK PL PA+ QGD +WY+ Sbjct: 181 EEVNAAYDAGRCDVYTTDQSGLYGIRLTLGSPADHVVLPEIISKEPLGPAVRQGDDQWYH 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT++A++ AEELGIT+ N++++ K++ +P+++R LG + + IG LG++ DW I Sbjct: 241 IVKWTYFALLQAEELGITKANVDEM-KNSASPEIKRVLGQEADTKIGTDLGVSNDWVVNI 299 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++ +GNYGEMF+RN+G+ S LKI RG NALW+KGGL YAPPIR Sbjct: 300 VKAVGNYGEMFERNVGSGSPLKIARGINALWTKGGLQYAPPIR 342 >gi|182678577|ref|YP_001832723.1| cationic amino acid ABC transporter, periplasmic binding protein [Beijerinckia indica subsp. indica ATCC 9039] gi|182634460|gb|ACB95234.1| cationic amino acid ABC transporter, periplasmic binding protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 336 Score = 453 bits (1167), Expect = e-125, Method: Composition-based stats. Identities = 183/342 (53%), Positives = 242/342 (70%), Gaps = 6/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M+K + L L T+ A L ++K RGFL CG N GL GF G W GFD Sbjct: 1 MFKSIVSA--GLFSLCVTTG-ALAGTLDEVKGRGFLNCGSNPGLAGFGLPDDKGQWVGFD 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +DFCRA+++AIFDDP+K+++LPL+ K+RF ALQS +IDILSRNT WT RE+ G F Sbjct: 58 IDFCRAVAAAIFDDPTKVKFLPLSGKDRFTALQSGEIDILSRNTTWTQSREVGQGFLFTG 117 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 ITY+DGQGF+ H+K ++S +L+GASICVQ GTTTEL LAD+F+A+N++Y P+ F + Sbjct: 118 ITYYDGQGFMTHRKLNLTSALELAGASICVQQGTTTELNLADFFRANNLQYEPVNFATGD 177 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E AY RCDA T D S LYA + P +HV+LP+IISK PL P + QGD +W+N+ Sbjct: 178 EALKAYDTGRCDALTTDASGLYAQRAKLANPDDHVVLPEIISKEPLGPLVRQGDDQWFNL 237 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V W H+A + AEE G+T KN+++ +K + +P+++R LG + N GE LGLT+DW YRII Sbjct: 238 VKWVHFAWLNAEEDGVTSKNLDEKTK-SESPEIKRLLGFEG--NFGEGLGLTRDWIYRII 294 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +H+GNYGE+FDRNLG S+LKI RG N LW+KGGL YAPP+R Sbjct: 295 KHVGNYGEVFDRNLGEGSKLKIKRGINNLWTKGGLHYAPPVR 336 >gi|294852106|ref|ZP_06792779.1| general L-amino acid transport system substrate-binding protein [Brucella sp. NVSL 07-0026] gi|294820695|gb|EFG37694.1| general L-amino acid transport system substrate-binding protein [Brucella sp. NVSL 07-0026] Length = 338 Score = 453 bits (1166), Expect = e-125, Method: Composition-based stats. Identities = 186/339 (54%), Positives = 249/339 (73%), Gaps = 3/339 (0%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 +L LF + +A L D+K +GFL+CG+NTGL+GFA G+W GFDVD+CR Sbjct: 1 MTGVLGAAALFGIASGASADTLSDVKAKGFLQCGVNTGLLGFASPNDKGEWSGFDVDYCR 60 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 A++SAIF DP+K+++ PLNAKERF ALQS ++D+L RNT WT+ R+ SLGL F I Y+D Sbjct: 61 AVASAIFGDPTKVKFTPLNAKERFTALQSGEVDVLIRNTTWTISRDTSLGLDFAGINYYD 120 Query: 126 GQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 GQGF+++ KK GI+S QLSGASICVQAGTTTEL +ADYF+A+ M+Y+P+VFE++EE + Sbjct: 121 GQGFMINSKKLAGINSALQLSGASICVQAGTTTELNMADYFRANKMEYNPVVFEKIEEAN 180 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 AAY + RCDAYT D S+LY ++L P +HVILP+IISK P + QGD W ++V W Sbjct: 181 AAYDSGRCDAYTTDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDARWADVVRW 240 Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHM 303 TH A++ AEE GITQ N+ ++ K + NPD++R LG + + IG LGL KDW +II+ + Sbjct: 241 THNALLNAEEYGITQANVEEMKK-SDNPDIKRLLGAEADTKIGTDLGLDKDWVVKIIKGV 299 Query: 304 GNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F+RN+G+ S LKI RG N W+KGGL Y P+R Sbjct: 300 GNYGEIFERNIGSGSPLKIARGLNVQWNKGGLQYGIPVR 338 >gi|217977867|ref|YP_002362014.1| cationic amino acid ABC transporter, periplasmic binding protein [Methylocella silvestris BL2] gi|217503243|gb|ACK50652.1| cationic amino acid ABC transporter, periplasmic binding protein [Methylocella silvestris BL2] Length = 340 Score = 453 bits (1165), Expect = e-125, Method: Composition-based stats. Identities = 182/343 (53%), Positives = 243/343 (70%), Gaps = 4/343 (1%) Query: 1 MYK-DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M+K + ++ L ++ + A +L ++KRG++ CG N G+ GF G W GF Sbjct: 1 MFKMNVVRTLFALGLMIGCAQGAQAGLLDQVQKRGYVICGSNPGVPGFGLPDDKGGWTGF 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVDFCRA+++AIF+DP+K++++ L+AK+RF ALQS ++D+LSRNT WTL RE G F Sbjct: 61 DVDFCRAVAAAIFNDPTKVKFIALSAKDRFTALQSGEVDLLSRNTTWTLSRETGQGFLFA 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 ITY+DGQGF++ KK +SS +LSGASICVQ GTTTEL LAD+F+ +NMKY P+ F Sbjct: 121 GITYYDGQGFLVRKKLNLSSALELSGASICVQQGTTTELNLADFFRGNNMKYEPVNFANA 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 EE A+ RCDAYT D S LY + P + V+LP+IISK PL PA+ QGD W+N Sbjct: 181 EEAVRAFEGGRCDAYTTDASGLYVERQRLADPEDSVVLPEIISKEPLGPAVRQGDDGWFN 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 +V WT +A+V AEELG+T KN+++ +K + P+V+R LG + N GE LGL DW YRI Sbjct: 241 VVKWTLFALVNAEELGVTSKNVDEKAK-SDRPEVRRLLGFEG--NFGEPLGLDADWAYRI 297 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++H+GNYGE+FDRNLG+ S LKI RG NALW+KGGL YAPPIR Sbjct: 298 VKHVGNYGEIFDRNLGDSSPLKIKRGINALWTKGGLQYAPPIR 340 >gi|148255314|ref|YP_001239899.1| putative amino-acid ABC transporter substrate-binding protein [Bradyrhizobium sp. BTAi1] gi|146407487|gb|ABQ35993.1| general L-amino acid-binding protein [Bradyrhizobium sp. BTAi1] Length = 338 Score = 453 bits (1165), Expect = e-125, Method: Composition-based stats. Identities = 173/341 (50%), Positives = 240/341 (70%), Gaps = 3/341 (0%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K +++ + S A L +K RG L CG++ GL GF+ G+W G DV Sbjct: 1 MKRVTLALTFALAPILASVGAQADTLKTVKDRGMLACGVSQGLPGFSSPDDKGNWTGIDV 60 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D CRA+++AIF+DP+KI+++PL+AK+RF ALQS +ID+LSRNT WTL R+ SLG F + Sbjct: 61 DVCRAVAAAIFNDPTKIKFVPLSAKDRFTALQSGEIDVLSRNTTWTLSRDTSLGANFAGV 120 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 TY+DGQGF++ K ++S +L+ AS+CVQ GTTTE LADYFKA+ MKY I F +E Sbjct: 121 TYYDGQGFMVKKALKVNSALELNSASVCVQTGTTTEQNLADYFKANKMKYEVIAFAGADE 180 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 AY + RCD YT D+S LYA +L P++HV+LP++ISK PL P + GD +W++IV Sbjct: 181 TVKAYESGRCDVYTTDVSGLYAERLKLANPADHVVLPEVISKEPLGPMVRHGDDQWFDIV 240 Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301 WT +A+VTAEELG+TQ N+++++K + P+ +R G D N+GE LGLTKDW RI++ Sbjct: 241 KWTLFALVTAEELGVTQANVDEMAK-SDKPEFKRAFGTDG--NLGEQLGLTKDWFSRIVK 297 Query: 302 HMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGE+++RN+G S+L+I RG N LW+KGGL YAPPIR Sbjct: 298 AVGNYGEVYERNVGAGSKLQIARGLNQLWNKGGLQYAPPIR 338 >gi|110633466|ref|YP_673674.1| cationic amino acid ABC transporter, periplasmic binding protein [Mesorhizobium sp. BNC1] gi|110284450|gb|ABG62509.1| general L-amino acid-binding protein [Chelativorans sp. BNC1] Length = 340 Score = 452 bits (1163), Expect = e-125, Method: Composition-based stats. Identities = 166/340 (48%), Positives = 246/340 (72%), Gaps = 3/340 (0%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 + ++L +++ +A+ L D+K RG L+CG+NTGL GFA GDW+G DVD+ Sbjct: 3 NLIKALLGTVVIASAVIPASAATLDDVKNRGALRCGVNTGLPGFAFQNDQGDWQGLDVDY 62 Query: 64 CRALSSAIF-DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 C+A+++A+F D +K+QY PL+A +RF ALQ+ ++D+L+RNT WT+ R+ +LGL F + Sbjct: 63 CKAVAAAVFEGDATKVQYSPLSAVQRFPALQNNEVDLLARNTTWTMNRDTALGLNFVGVN 122 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y+DGQGF++ + ++S QLSGA++CVQ+GTTTEL L DYF+A+NM+++P+V E+ ++ Sbjct: 123 YYDGQGFMVRQDLNVTSALQLSGATVCVQSGTTTELNLTDYFRANNMEFNPVVIEQQSDV 182 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 ++AY RCD T D S LYA +L P +HV+LP+IISK PL P + QGD +W++IV Sbjct: 183 NSAYEQGRCDVLTTDASGLYASRLELSNPDDHVVLPEIISKEPLGPVVRQGDEQWFDIVK 242 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302 W H+ ++ AEELG+TQ N+ ++ ++ NPDV+R LG D + G+ +GLT DW +I+ Sbjct: 243 WVHFGLINAEELGVTQDNVEDMAANSENPDVRRLLGADGT--FGQDVGLTNDWMVNVIKA 300 Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGE+FDRN+G + LKI RG NALW+KGGL YAPP+R Sbjct: 301 VGNYGEIFDRNVGPNTPLKIQRGLNALWTKGGLQYAPPVR 340 >gi|326408764|gb|ADZ65829.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella melitensis M28] gi|326538482|gb|ADZ86697.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella melitensis M5-90] Length = 338 Score = 452 bits (1163), Expect = e-125, Method: Composition-based stats. Identities = 186/339 (54%), Positives = 248/339 (73%), Gaps = 3/339 (0%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 +L LF + +A L D+K +GFL+CG+NTGL+GFA G+W GFDVD+CR Sbjct: 1 MTGVLGAAALFGIASGASADTLSDVKAKGFLQCGVNTGLLGFASPNDKGEWSGFDVDYCR 60 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 A++SAIF DP+K+++ PLNAKERF A QS ++D+L RNT WT+ R+ SLGL F I Y+D Sbjct: 61 AVASAIFGDPTKVKFTPLNAKERFTAFQSGEVDVLIRNTTWTISRDTSLGLDFAGINYYD 120 Query: 126 GQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 GQGF+++ KK GI+S QLSGASICVQAGTTTEL +ADYF+A+ M+Y+P VFE++EE + Sbjct: 121 GQGFMINSKKLAGINSALQLSGASICVQAGTTTELNMADYFRANKMEYNPAVFEKIEEAN 180 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 AAY + RCDAYT D S+LY ++L P +HVILP+IISK P + QGD W ++V W Sbjct: 181 AAYDSGRCDAYTTDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDARWADVVRW 240 Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHM 303 TH A++ AEE GITQ N+ ++ K + NPD++R LG + + IG LGL KDW +II+ + Sbjct: 241 THNALLNAEEYGITQANVEEMKK-SDNPDIKRLLGAEADTKIGTDLGLDKDWVVKIIKGV 299 Query: 304 GNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F+RN+G+ S LKI RG NA W+KGGL Y P+R Sbjct: 300 GNYGEIFERNIGSGSPLKIARGLNAQWNKGGLQYGIPVR 338 >gi|220926164|ref|YP_002501466.1| family 3 extracellular solute-binding protein [Methylobacterium nodulans ORS 2060] gi|219950771|gb|ACL61163.1| extracellular solute-binding protein family 3 [Methylobacterium nodulans ORS 2060] Length = 337 Score = 452 bits (1162), Expect = e-125, Method: Composition-based stats. Identities = 179/333 (53%), Positives = 240/333 (72%), Gaps = 2/333 (0%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 L L + + + + L IK++GF+ CG N GL GF A G W G DVDFCRAL++ Sbjct: 7 LSLSVCLLSGAAQAQATLASIKQKGFIACGSNPGLAGFGVPDAQGRWTGLDVDFCRALAA 66 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 AIF+D ++++++PL+AK+RF ALQS ++D+LSRNT WT+ R+ SLGL F + ++DGQGF Sbjct: 67 AIFNDTTRVRFIPLSAKDRFTALQSGEVDVLSRNTTWTMSRDTSLGLDFPSVNFYDGQGF 126 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 ++ KK G++S QL GASIC Q GTTTEL LADYF+A+ +KY + F +E AY + Sbjct: 127 MVKKKLGVTSAKQLDGASICTQQGTTTELNLADYFRANKLKYEAVAFATADETFKAYDSG 186 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 RCDA+T D S LYA +L P ++V+LP++ISK PL PA+ GD++W +IV WTH+AM+ Sbjct: 187 RCDAFTTDASGLYAERLRASNPDDNVVLPEVISKEPLGPAVRHGDSQWADIVRWTHFAML 246 Query: 250 TAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEM 309 AEE GITQ N++Q+ K T NPDV+R LG + GE +GLT DW YRII+ +GNYGE+ Sbjct: 247 NAEEAGITQANVDQMLKSTDNPDVKRILGTEG--KFGEGIGLTNDWAYRIIKLVGNYGEV 304 Query: 310 FDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 F+RN+G S+LKI RG NALWSKGGL Y PPIR Sbjct: 305 FERNVGQGSQLKIQRGVNALWSKGGLQYGPPIR 337 >gi|146340850|ref|YP_001205898.1| putative amino-acid ABC transporter substrate-binding protein [Bradyrhizobium sp. ORS278] gi|146193656|emb|CAL77673.1| putative amino-acid ABC transporter, substrate-binding protein [Bradyrhizobium sp. ORS278] Length = 338 Score = 451 bits (1161), Expect = e-125, Method: Composition-based stats. Identities = 172/341 (50%), Positives = 240/341 (70%), Gaps = 3/341 (0%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K +++ + S A L +K RG L CG++ GL GF+ G+W G DV Sbjct: 1 MKRVTLALTLALAPVLASVGAQAETLKTVKDRGMLACGVSQGLPGFSNPDDKGNWTGLDV 60 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D CRA+++AIF+DP+K++Y+PL+AK+RF ALQS ++D+LSRNT WTL R+ SLG F I Sbjct: 61 DVCRAIAAAIFNDPTKVKYVPLSAKDRFTALQSGEVDVLSRNTTWTLSRDTSLGANFAGI 120 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 TY+DGQGF++ K ++S +L+ AS+CVQ GTTTE LADYFKA+ MKY I F +E Sbjct: 121 TYYDGQGFMVKKALKVNSALELNSASVCVQTGTTTEQNLADYFKANKMKYEVIAFAGADE 180 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 AY + RCD +T D+S LYA +L P++HV+LP++ISK PL P + GD +W++IV Sbjct: 181 TVKAYESGRCDVFTTDVSGLYAERLKLANPADHVVLPEVISKEPLGPMVRHGDDQWFDIV 240 Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301 WT + ++TAEE+G+TQ N+++++K + PD +R G D N+GE LGLTKDW RI++ Sbjct: 241 KWTLFGLITAEEMGVTQANVDEMAK-SDKPDFKRAFGTDG--NLGEQLGLTKDWFSRIVK 297 Query: 302 HMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGEM+DRN+G+ S+L+I RG N LW+KGGL YAPPIR Sbjct: 298 AVGNYGEMYDRNVGSGSKLQIARGLNQLWNKGGLQYAPPIR 338 >gi|299133835|ref|ZP_07027029.1| cationic amino acid ABC transporter, periplasmic binding protein [Afipia sp. 1NLS2] gi|298591671|gb|EFI51872.1| cationic amino acid ABC transporter, periplasmic binding protein [Afipia sp. 1NLS2] Length = 339 Score = 450 bits (1159), Expect = e-124, Method: Composition-based stats. Identities = 169/342 (49%), Positives = 238/342 (69%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M +F ++ + L S + L +++RG L CG++ GL GF+ G W G D Sbjct: 1 MKYGWFGIVMTSVFLGSLSPVNAQATLKAVQERGVLSCGVSQGLPGFSAPDDTGKWSGLD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDFCRAL++ + +DP K++++PL+AK+RF ALQS +ID+LSRNT W+L R+ SLGL F Sbjct: 61 VDFCRALAAVVLNDPLKVKFVPLSAKDRFTALQSGEIDVLSRNTTWSLSRDTSLGLNFTA 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K ++S +L+GAS+CVQ GTT E LADYF+A+NMKY + F + Sbjct: 121 VMYYDGQGFLVRKALKVNSALELNGASVCVQTGTTNEQNLADYFRANNMKYEVVAFSTAD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E AY + RCD +T D+S LYA +L P +HV+LP+IISK PL P + GD +W++I Sbjct: 181 ETIKAYESGRCDVFTSDVSQLYAERLKLTVPDDHVVLPEIISKEPLGPVVRHGDDQWFDI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEEL +TQKN+ +++K + P++ R LG D N+GE LGLTKDW RI+ Sbjct: 241 VKWTLFAMINAEELNVTQKNVGEMTK-SNKPEIARLLGTDG--NLGEQLGLTKDWVVRIV 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE FDRN+G S+L+I RG N LW++GG+ YAPPIR Sbjct: 298 KAVGNYGESFDRNVGAGSKLRISRGLNKLWNQGGIQYAPPIR 339 >gi|261342745|ref|ZP_05970603.1| general amino acid ABC transporter, periplasmic binding protein [Enterobacter cancerogenus ATCC 35316] gi|288315398|gb|EFC54336.1| general amino acid ABC transporter, periplasmic binding protein [Enterobacter cancerogenus ATCC 35316] Length = 341 Score = 450 bits (1159), Expect = e-124, Method: Composition-based stats. Identities = 161/343 (46%), Positives = 236/343 (68%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K S+ +LF + +A L +KK+GF++CGI+ GL GF+ ANG + G Sbjct: 1 MKKTMIASLAAAGVLFAVASQAHAGTTLDAVKKKGFVQCGISDGLPGFSYADANGKFTGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D SK++Y PL AKERF ALQS ++D+LSRNT WT R+ +G++F Sbjct: 61 DVDVCRGVAAAVFGDDSKVKYTPLTAKERFTALQSGEVDMLSRNTTWTSSRDAGMGMSFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA++MKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANSMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + +GD +W++ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDEDWFS 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GIT KN+++ + + + PD+ LG + + G+ L L W Y I Sbjct: 241 IVRWTLFAMLNAEEMGITSKNVDEKAANPSTPDMSHLLGKEG--DFGKDLKLDNKWAYHI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++ +GNYGE+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 VKQVGNYGEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341 >gi|92117599|ref|YP_577328.1| extracellular solute-binding protein [Nitrobacter hamburgensis X14] gi|91800493|gb|ABE62868.1| amino acid ABC transporter substrate-binding protein, PAAT family [Nitrobacter hamburgensis X14] Length = 344 Score = 450 bits (1157), Expect = e-124, Method: Composition-based stats. Identities = 171/347 (49%), Positives = 237/347 (68%), Gaps = 8/347 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-----ILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M V L S S S L +K RG L CG++ GL GF+ G+ Sbjct: 1 MKCVLAVIFAIAAGLPLQSASAQESAKVKTTLEAVKTRGMLSCGVSQGLPGFSAPDDKGN 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 W G DVD CRA+++ +F+DP+K++++PL+AK+RF+ALQS +ID+LSRNT WTL R+ SLG Sbjct: 61 WTGLDVDVCRAIAAVVFNDPTKVKFVPLSAKDRFIALQSGEIDVLSRNTTWTLSRDTSLG 120 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F +TY+DGQGF++ K ++S +L+ AS+CVQ GTTTE LADYFK++ MKY I Sbjct: 121 ANFTGVTYYDGQGFLVRKSLKVNSALELNSASVCVQTGTTTEQNLADYFKSNKMKYEVIA 180 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F +E AY + RCD +T DIS LYA +L P++H +LP++ISK PL P + GD Sbjct: 181 FSTADETIKAYESGRCDVFTSDISQLYAERLKLSNPADHAVLPEVISKEPLGPMVRHGDD 240 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDW 295 +W+++V WT +AM+ AEELGITQKN+++++K + NP+++R G D N GE LG+TKDW Sbjct: 241 QWFDLVKWTLFAMIDAEELGITQKNVDEMAK-SNNPELKRVFGTDG--NFGEQLGVTKDW 297 Query: 296 TYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 RI++ +GNYGE FDRN+G S+L I RG N LW++GG+ YAPPIR Sbjct: 298 VSRIVKAVGNYGESFDRNVGAGSKLGIARGLNRLWNQGGIQYAPPIR 344 >gi|91977030|ref|YP_569689.1| lysine-arginine-ornithine-binding periplasmic protein [Rhodopseudomonas palustris BisB5] gi|91683486|gb|ABE39788.1| Lysine-arginine-ornithine-binding periplasmic protein [Rhodopseudomonas palustris BisB5] Length = 338 Score = 449 bits (1156), Expect = e-124, Method: Composition-based stats. Identities = 172/341 (50%), Positives = 239/341 (70%), Gaps = 3/341 (0%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K ++ I F + S A L +K RG L CG++ GL GF+ G+W G DV Sbjct: 1 MKRVSLAAAVAITACFAAQSAGAQTLKTVKDRGLLSCGVSQGLPGFSAPDDKGNWTGLDV 60 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D CRA+++AIFDDPSK++++PL+AK+RF ALQS +ID+LSRNT WT+ R+ SLG+ F + Sbjct: 61 DLCRAVAAAIFDDPSKVKFVPLSAKDRFTALQSGEIDVLSRNTTWTVSRDTSLGVNFAGV 120 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 +Y+DGQGF++ K ++S +L+ ASICVQ GTT E +ADYFK +NMKY I F +E Sbjct: 121 SYYDGQGFLVKKALKVNSALELNSASICVQTGTTNEQNVADYFKGNNMKYEVIAFANADE 180 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 AY + RCD +T D+S LYA +L P++HV+LP++ISK PL P + GD +W++IV Sbjct: 181 AIKAYESGRCDVFTSDVSQLYAQRLKVTTPADHVVLPEVISKEPLGPLVRHGDDQWFDIV 240 Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301 WT +A+V AEELG+TQ N+ +++K + P+++R G D N+GE LGLTKDW RI++ Sbjct: 241 KWTLFALVNAEELGVTQSNVGEMAK-SDKPELKRVFGSDG--NLGEQLGLTKDWVARIVK 297 Query: 302 HMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE F+RN+G S+L+I RG N LW+KGG+MYAPPIR Sbjct: 298 ATGNYGESFERNVGTGSKLEIARGLNKLWNKGGIMYAPPIR 338 >gi|296104983|ref|YP_003615129.1| general L-amino acid transport system substrate-binding protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059442|gb|ADF64180.1| general L-amino acid transport system substrate-binding protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 341 Score = 449 bits (1156), Expect = e-124, Method: Composition-based stats. Identities = 161/343 (46%), Positives = 234/343 (68%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K S+ +LF + +A L +KK+GF++CGI+ GL GF+ ANG + G Sbjct: 1 MKKTMIASLAAAGMLFAVAGQAHAGTTLDAVKKKGFVQCGISDGLPGFSYADANGKFTGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D SK++Y PL AKERF ALQS ++D+LSRNT WT R+ +G++F Sbjct: 61 DVDVCRGVAAAVFGDDSKVKYTPLTAKERFTALQSGEVDMLSRNTTWTSSRDAGMGMSFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + +GD +W++ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDEDWFS 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GI+ KN+++ + + PD+ LG + + G+ L L W Y I Sbjct: 241 IVRWTLFAMLNAEEMGISSKNVDEKAAKPSTPDMAHLLGTEG--DFGKDLKLDNKWAYHI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 IKQVGNYAEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341 >gi|307942366|ref|ZP_07657717.1| general L-amino acid-binding periplasmic protein AapJ [Roseibium sp. TrichSKD4] gi|307774652|gb|EFO33862.1| general L-amino acid-binding periplasmic protein AapJ [Roseibium sp. TrichSKD4] Length = 371 Score = 448 bits (1154), Expect = e-124, Method: Composition-based stats. Identities = 176/342 (51%), Positives = 243/342 (71%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F +L + + S +A+ L D+K +GF++CG++ GL GF+ + G+W G D Sbjct: 34 MSKKFLPLVLGAA-MGVAATSASAATLDDVKAKGFVQCGVSQGLPGFSNPDSQGNWTGLD 92 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD CRA+++AIFDD + +++ PL+AKERF ALQS +ID+LSRNT WT+ R+ SLGL F Sbjct: 93 VDVCRAMAAAIFDDVNAVKFTPLSAKERFTALQSGEIDVLSRNTTWTMTRDTSLGLNFAG 152 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K G++S +LSGAS+C GTTTEL +ADYF+A+NM Y + FE+ + Sbjct: 153 VNYYDGQGFMVRKDLGVTSALELSGASVCTNTGTTTELNVADYFRANNMPYEIVAFEKAD 212 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E+ AAY A RCD YT D S LYA +L P +H++LP+IISK PL P + QGD +W+N+ Sbjct: 213 EVVAAYDAGRCDVYTTDASGLYAQRLKLTNPGDHMVLPEIISKEPLGPVVRQGDDQWFNL 272 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT AM+ AEELG+T N++ + K + NP V+R LG + + GE +GLT DW RII Sbjct: 273 VKWTLNAMINAEELGVTSANVDDM-KGSDNPSVKRLLGTEGA--YGENIGLTNDWAARII 329 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +H+GNYGE FD N+G + L I RG NALWSKGG++YAPP+R Sbjct: 330 KHVGNYGESFDANVGPDTPLGIARGVNALWSKGGVLYAPPVR 371 >gi|209885181|ref|YP_002289038.1| general L-amino acid-binding periplasmic protein AapJ [Oligotropha carboxidovorans OM5] gi|209873377|gb|ACI93173.1| general L-amino acid-binding periplasmic protein AapJ [Oligotropha carboxidovorans OM5] Length = 338 Score = 448 bits (1152), Expect = e-124, Method: Composition-based stats. Identities = 172/342 (50%), Positives = 237/342 (69%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M +F ++ +I+ + +A L IK RG L CG++ GL GF+ G W G D Sbjct: 1 MKYGWFGIVMTSLIVGGLA-PASAQTLKTIKDRGVLSCGVSQGLPGFSAPDDTGKWSGLD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDFCRALS+AIF+DP K++++PL+AK+RF ALQS +ID+LSRNT W++ R+ SLGL F Sbjct: 60 VDFCRALSAAIFNDPLKVKFVPLSAKDRFTALQSGEIDVLSRNTTWSMSRDTSLGLNFTA 119 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K ++S +L+GAS+CVQ GTT E LADYF+A+ MKY + F + Sbjct: 120 VMYYDGQGFLVRKSLKVNSALELNGASVCVQTGTTNEQNLADYFRANGMKYEVVAFATAD 179 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E AY + RCDA+T D+S LYA +L P +H +LPDIISK PL P + GD +W++I Sbjct: 180 ETMKAYESGRCDAFTSDVSQLYAERLKLTVPDDHAVLPDIISKEPLGPVVRHGDDQWFDI 239 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +A++ AEEL +TQKN+ + K + P++ R LG D N GE LGLTKDW RI+ Sbjct: 240 VKWTLFALLNAEELAVTQKNVGDMVK-SNKPEIARLLGSDG--NFGEQLGLTKDWVVRIV 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE FDRN+G S+L+I RG N LW++GG+ YAPP+R Sbjct: 297 KAVGNYGESFDRNVGAGSKLRISRGLNKLWNQGGIQYAPPVR 338 >gi|89073072|ref|ZP_01159619.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Photobacterium sp. SKA34] gi|89051290|gb|EAR56746.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Photobacterium sp. SKA34] Length = 342 Score = 447 bits (1151), Expect = e-124, Method: Composition-based stats. Identities = 161/339 (47%), Positives = 232/339 (68%), Gaps = 2/339 (0%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 + L F + + + L + K+G+++CG++ GL GF+ A G W+G DV+F Sbjct: 6 SVVFAALASSTALFAANANAEATLDKVMKQGYVQCGVSAGLPGFSNPNAKGQWEGLDVEF 65 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 C+A+++A D SK++Y+PL AKERF ALQS +ID+LSRNT WTL R+ SLGL F + Y Sbjct: 66 CQAIAAATIGDKSKVKYIPLTAKERFTALQSGEIDVLSRNTTWTLHRDTSLGLNFTGVNY 125 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 +DGQGF++ K GI+S +L GA++CVQ+GTTTEL LADYF+ + M Y P+VF+ + Sbjct: 126 YDGQGFMVKKDMGITSAKELDGAAVCVQSGTTTELNLADYFRVNGMTYKPVVFDTAPQTS 185 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 + + RCD T D S LYAL+L PS V+LP+IISK PL P + QGD +W+N+V W Sbjct: 186 KGFDSGRCDVLTTDQSGLYALRLNLKDPSSAVVLPEIISKEPLGPVVRQGDDQWFNVVRW 245 Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHM 303 T + M+ AEE +T N+++++K++ +P+++R +G+D G+ LGL DW Y+II+ + Sbjct: 246 TLFTMINAEEFNVTSANVDKLAKESKDPNIRRLIGLDGPK--GKGLGLKDDWGYQIIKQV 303 Query: 304 GNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE F+R +G S LKI RG NALW+ GG+ YAPPIR Sbjct: 304 GNYGESFERTVGEGSPLKIKRGLNALWTNGGIQYAPPIR 342 >gi|126668363|ref|ZP_01739321.1| Lysine-arginine-ornithine-binding periplasmic protein [Marinobacter sp. ELB17] gi|126627179|gb|EAZ97818.1| Lysine-arginine-ornithine-binding periplasmic protein [Marinobacter sp. ELB17] Length = 340 Score = 447 bits (1151), Expect = e-123, Method: Composition-based stats. Identities = 172/343 (50%), Positives = 238/343 (69%), Gaps = 4/343 (1%) Query: 1 MYKDFF-VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K V+I + + S A+ L D+K RG ++CG+ +GL GF++ NG+W G Sbjct: 1 MKKQLLLVAIATTLGGTLMAGSVQAATLDDVKSRGHVQCGVTSGLPGFSQPDENGNWTGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CRA+++A+F K+Q+ PL AKERF ALQS +IDILSRNT WTL R+ SLGL F Sbjct: 61 DVDTCRAVAAAVFGSADKVQFTPLTAKERFTALQSGEIDILSRNTTWTLTRDASLGLNFA 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y+DGQGF++ K G+ + QL GA+IC+QAGTTTEL LADYF+ MK++P+VF+ Sbjct: 121 GTNYYDGQGFLVSKSLGVDNAEQLDGATICIQAGTTTELNLADYFRTKGMKFNPLVFDTS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E+ + + A RCD T D S L AL+ + PS VILP+IISK PL P + QGD +W+N Sbjct: 181 EQTVSGFAAGRCDVLTSDRSQLAALRSKLEDPSSAVILPNIISKEPLGPVVRQGDDQWFN 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT + + AEELG+TQ N++ + K +TNP++QR LG + ++GE LG+ D+ +RI Sbjct: 241 IVKWTLFVQINAEELGVTQANVSDM-KSSTNPEIQRLLGT--TGDMGEKLGVPADFGFRI 297 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNYGEM++RN+G + L + RG NALW+ GG+MYAPP+R Sbjct: 298 IQTVGNYGEMYERNVGPDTPLGLDRGLNALWNNGGIMYAPPVR 340 >gi|90578887|ref|ZP_01234697.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio angustum S14] gi|90439720|gb|EAS64901.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio angustum S14] Length = 342 Score = 447 bits (1150), Expect = e-123, Method: Composition-based stats. Identities = 160/339 (47%), Positives = 231/339 (68%), Gaps = 2/339 (0%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 + L F + + + L + K+G+++CG++ GL GF+ A G W+G DV+F Sbjct: 6 SVVFAALASSTALFAANANAEATLDKVMKQGYVQCGVSAGLPGFSNPNAKGQWEGLDVEF 65 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 C+A+++A D SK++Y+PL AKERF ALQS +ID+LSRNT WTL R+ SLGL F + Y Sbjct: 66 CQAIAAATIGDKSKVKYIPLTAKERFTALQSGEIDVLSRNTTWTLHRDTSLGLNFTGVNY 125 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 +DGQGF++ K GI S +L GA++CVQ+GTTTEL LADYF+ + M Y P+VF+ + Sbjct: 126 YDGQGFMVKKDMGIKSAKELDGAAVCVQSGTTTELNLADYFRVNGMTYKPVVFDTAPQTS 185 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 + + RCD T D S LYAL+L P+ V+LP+IISK PL P + QGD +W+N+V W Sbjct: 186 KGFDSGRCDVLTTDQSGLYALRLNLKDPNSAVVLPEIISKEPLGPVVRQGDDQWFNVVRW 245 Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHM 303 T + M+ AEE +T N+++++K++ +P+++R +G+D G+ LGL DW Y+II+ + Sbjct: 246 TLFTMINAEEFNVTSANVDKLAKESKDPNIRRLIGLDGPK--GKGLGLKDDWGYQIIKQV 303 Query: 304 GNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE F+R +G S LKI RG NALW+ GG+ YAPPIR Sbjct: 304 GNYGESFERTVGEGSPLKIKRGLNALWTNGGIQYAPPIR 342 >gi|316934242|ref|YP_004109224.1| cationic amino acid ABC transporter periplasmic-binding protein [Rhodopseudomonas palustris DX-1] gi|315601956|gb|ADU44491.1| cationic amino acid ABC transporter, periplasmic binding protein [Rhodopseudomonas palustris DX-1] Length = 338 Score = 447 bits (1150), Expect = e-123, Method: Composition-based stats. Identities = 171/325 (52%), Positives = 236/325 (72%), Gaps = 3/325 (0%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 + S +A L +K RG L CG++ GL GF+ G+W G DVD CRA+++AIFDDPSK Sbjct: 17 SVSSADAQTLKTVKDRGMLSCGVSQGLPGFSSPDDKGNWTGLDVDVCRAIAAAIFDDPSK 76 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++++PL+AK+RF ALQS +ID+LSRNT WTL R+ SLG+ F I+Y+DGQGF+ K + Sbjct: 77 VKFVPLSAKDRFTALQSGEIDVLSRNTTWTLSRDTSLGVNFAGISYYDGQGFMAKKALKV 136 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 +S +L+GASICVQ GTT E +ADYFK +NMKY I F +E AY RCD +T D Sbjct: 137 NSALELNGASICVQTGTTNEQNVADYFKGNNMKYEVIAFANADEAVKAYETGRCDVFTSD 196 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 +S LYA +L P++H++LP++ISK PL P + GD +W++IV WT + ++ AEELG+T Sbjct: 197 VSQLYAQRLKLATPADHIVLPEVISKEPLGPLVRHGDDQWFDIVKWTLFGLINAEELGVT 256 Query: 258 QKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQ 317 QKN+++++K + P+++R G D N+GE LGLTKDW RII+ GNYGE F+RN+G+ Sbjct: 257 QKNVDEMAK-SDKPELKRVFGTDG--NLGEQLGLTKDWVARIIKATGNYGESFERNVGSG 313 Query: 318 SELKIPRGYNALWSKGGLMYAPPIR 342 S+L+I RG N LW+KGG+MYAPPIR Sbjct: 314 SKLEIARGLNKLWNKGGIMYAPPIR 338 >gi|330446205|ref|ZP_08309857.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328490396|dbj|GAA04354.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 342 Score = 447 bits (1149), Expect = e-123, Method: Composition-based stats. Identities = 161/339 (47%), Positives = 233/339 (68%), Gaps = 2/339 (0%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 + L F + + L + K+G+++CG++ GL GF+ A G W+G DV+F Sbjct: 6 SVVFAALASSTALFAANVNAEATLDKVMKQGYVQCGVSAGLPGFSNPNAKGQWEGLDVEF 65 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 C+A+++A D SK++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F + Y Sbjct: 66 CQAIAAATIGDKSKVKYIPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFTGVNY 125 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 +DGQGF++ K GI S +L GA++CVQ+GTTTEL LADYF+ + M+Y P+VF+ + Sbjct: 126 YDGQGFMVKKDMGIKSAKELDGAAVCVQSGTTTELNLADYFRVNGMEYKPVVFDTAPQTS 185 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 + + RCD T D S LYAL+L P+ V+LP+IISK PL P + QGD +W+NIV W Sbjct: 186 KGFDSGRCDVLTTDQSGLYALRLNLKDPNSAVVLPEIISKEPLGPVVRQGDDQWFNIVRW 245 Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHM 303 T + M+ AEE G+T N+++++K++ +P+++R +G+D G+ LGL DW Y+II+ + Sbjct: 246 TLFTMINAEEFGVTAANVDKLAKESKDPNIRRLIGLDGPK--GKGLGLKDDWGYQIIKQV 303 Query: 304 GNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE F+R +G S LKI RG NALW++GG+ YAPPIR Sbjct: 304 GNYGESFERTVGEGSPLKIKRGLNALWTQGGIQYAPPIR 342 >gi|288958131|ref|YP_003448472.1| general L-amino acid transport system substrate-binding protein [Azospirillum sp. B510] gi|288910439|dbj|BAI71928.1| general L-amino acid transport system substrate-binding protein [Azospirillum sp. B510] Length = 339 Score = 447 bits (1149), Expect = e-123, Method: Composition-based stats. Identities = 169/318 (53%), Positives = 237/318 (74%), Gaps = 4/318 (1%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L +K+RGF++CG+N GL GF + G+W G DVD+CRA++ AIF D +K+++ PL+A Sbjct: 25 TLDTVKQRGFVQCGVNAGLPGFGNPDSAGNWTGLDVDYCRAVAVAIFGDANKVKFTPLSA 84 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 ++RF A+QS ++D+LSRNT TL R+ S+GL F P+TY+DGQGF++ KK G+ S +L+G Sbjct: 85 QQRFPAIQSGEVDLLSRNTTVTLTRDTSVGLNFAPVTYYDGQGFMVPKKLGVKSAKELNG 144 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 A++CVQ+GTTTEL LADYF+A+NM Y+P+V E +E++AAY A RCD T D+S L + Sbjct: 145 ATVCVQSGTTTELNLADYFRANNMTYNPVVIESNDEVNAAYFAGRCDVLTTDVSGLAGTR 204 Query: 206 LT-NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 P +HVILP++ISK PLAPA+ GD +W++IV WT YA + AEE GIT KNI++ Sbjct: 205 AGVAPVPDDHVILPEVISKEPLAPAVRHGDDQWFDIVKWTVYATIQAEEFGITSKNIDEF 264 Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324 + ++ NPD+QRFLG S +G+A+GL + W Y I++ +GNY E+FDRN+G + LK+ R Sbjct: 265 A-NSKNPDIQRFLGT--SPGMGKAMGLDEKWAYNIVKKVGNYAEIFDRNVGPATPLKLER 321 Query: 325 GYNALWSKGGLMYAPPIR 342 G NALW+KGGLMYA P R Sbjct: 322 GLNALWTKGGLMYAQPFR 339 >gi|90419549|ref|ZP_01227459.1| lysine-arginine-ornithine-binding periplasmic protein [Aurantimonas manganoxydans SI85-9A1] gi|90336486|gb|EAS50227.1| lysine-arginine-ornithine-binding periplasmic protein [Aurantimonas manganoxydans SI85-9A1] Length = 334 Score = 447 bits (1149), Expect = e-123, Method: Composition-based stats. Identities = 170/337 (50%), Positives = 244/337 (72%), Gaps = 3/337 (0%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 ++L L + +A L +K RG L+CG+NTGL GFA G W+G D+D+C+ Sbjct: 1 MTAVLGLTVAGVAVSGASAQTLQTVKDRGVLRCGVNTGLPGFASQNDQGAWQGLDIDYCK 60 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 A+++A+F DPSK++Y PL+A +RF ALQ+ ++D+L+RNT WT+ R+ +LGL F + Y+D Sbjct: 61 AIAAAVFGDPSKVEYSPLSAVQRFPALQNNEVDVLARNTTWTMDRDTTLGLTFAGVNYYD 120 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 GQGF++ K G++S +LSGA++CVQ+GTTTEL LADYF+ +NM+Y+P+V E ++++A Sbjct: 121 GQGFMVKKDLGVNSALELSGATVCVQSGTTTELNLADYFRTNNMEYNPVVIESQSDVNSA 180 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 Y + RCD T D S L A +L EH ILP+IISK PL PA+ QGDTEW+N+V WTH Sbjct: 181 YDSGRCDVLTTDASGLAASRLEMGNADEHTILPEIISKEPLGPAVRQGDTEWFNVVKWTH 240 Query: 246 YAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGN 305 A++ AEELG+TQ+N+ + K + NP+++R LG DK N GE++GL++DW II+ +GN Sbjct: 241 NALLNAEELGVTQENVEDM-KTSENPEIRRLLGEDK--NFGESIGLSQDWAVNIIKAVGN 297 Query: 306 YGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 YGE+F+RN+G + L+I RG NALW+KGGL Y PIR Sbjct: 298 YGEIFERNIGVDTPLEIARGQNALWTKGGLQYGMPIR 334 >gi|311277770|ref|YP_003940001.1| extracellular solute-binding protein family 3 [Enterobacter cloacae SCF1] gi|308746965|gb|ADO46717.1| extracellular solute-binding protein family 3 [Enterobacter cloacae SCF1] Length = 341 Score = 447 bits (1149), Expect = e-123, Method: Composition-based stats. Identities = 165/343 (48%), Positives = 233/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K S + +LF + +A + IKK+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKTTIASFVAAGVLFAIASQAHAGATFDAIKKKGFVQCGISDGLPGFSYADADGKFTGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D SK++Y PL AKERF ALQS ++D+LSRNT WT R+ +GL+F Sbjct: 61 DVDVCRGVAAAVFGDASKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGLSFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ +P+E V+LP++ISK PL P + +GD EW+ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSKPTEWVVLPEVISKEPLGPVVRRGDDEWFA 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GI KN+++ + + +NPD+ LG + + G+ L L W Y I Sbjct: 241 IVRWTLFAMLNAEEMGINSKNVDEKAANPSNPDMSHLLGKEG--DFGKDLKLDNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+FDRN+G S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 IKQVGNYAEIFDRNVGADSPLKIKRGQNNLWNNGGIQYAPPVR 341 >gi|90424048|ref|YP_532418.1| lysine-arginine-ornithine-binding periplasmic protein [Rhodopseudomonas palustris BisB18] gi|90106062|gb|ABD88099.1| Lysine-arginine-ornithine-binding periplasmic protein [Rhodopseudomonas palustris BisB18] Length = 350 Score = 446 bits (1148), Expect = e-123, Method: Composition-based stats. Identities = 166/341 (48%), Positives = 237/341 (69%), Gaps = 3/341 (0%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K +++ + F + + A L ++ RG L CG++ GL GF+ G+W G DV Sbjct: 13 MKRVSLALSVAVAAGFLTQAAGAQTLKTVQDRGVLSCGVSQGLPGFSAPDDKGNWTGIDV 72 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D CRA+++A+F+DP+K++++PL+AK+RF ALQS +ID+LSRNT WT+ R+ SLG+ F + Sbjct: 73 DVCRAIAAAVFNDPTKVKFVPLSAKDRFTALQSGEIDVLSRNTTWTVSRDTSLGVNFTGV 132 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 TY+DGQGF++ K ++S +L+ ASICVQ GTT E +ADYFK +NMKY I F +E Sbjct: 133 TYYDGQGFLVRKALKVNSALELNSASICVQTGTTNEQNVADYFKGNNMKYEVIAFGTADE 192 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 AY + RCD +T D+S LYAL+L P++H +LP++ISK PL P + GD +W++IV Sbjct: 193 AVKAYESGRCDVFTSDVSQLYALRLKLATPADHAVLPEVISKEPLGPLVRHGDDQWFDIV 252 Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301 WT +A++ AEELG+ QKN++ +K P+++R G D N+GE LGLTKDW RI++ Sbjct: 253 KWTLFALLNAEELGVNQKNVDDQAK-LDKPELKRVFGTDG--NLGEQLGLTKDWVIRIVK 309 Query: 302 HMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+FDRN+G S+L I RG N LW+KGG+ YAPPIR Sbjct: 310 ATGNYGEIFDRNVGAGSKLGIARGLNQLWNKGGIQYAPPIR 350 >gi|27379557|ref|NP_771086.1| ABC transporter amino acid-binding protein [Bradyrhizobium japonicum USDA 110] gi|27352709|dbj|BAC49711.1| ABC transporter amino acid-binding protein [Bradyrhizobium japonicum USDA 110] Length = 338 Score = 446 bits (1148), Expect = e-123, Method: Composition-based stats. Identities = 171/320 (53%), Positives = 231/320 (72%), Gaps = 3/320 (0%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 +A L +K RG L CG++ GL GF+ G+W G DVD CRA+++AIF+DP+K++++P Sbjct: 22 DAQTLKTVKDRGTLSCGVSQGLPGFSAPDDKGNWTGLDVDVCRAIAAAIFNDPTKVKFVP 81 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 +AK+RF ALQS +ID+LSRNT WT+ R+ SLG F +TY+DGQGF++ K ++S + Sbjct: 82 TSAKDRFTALQSGEIDVLSRNTTWTISRDTSLGANFTGVTYYDGQGFMVKKSLKVNSALE 141 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+ AS+CVQ GTTTE LADYFKA+NMKY I F +E AY A RCD +T D S LY Sbjct: 142 LNSASVCVQTGTTTEQNLADYFKANNMKYEVIAFGTNDETVKAYEAGRCDVFTTDQSGLY 201 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 A +L P++H++LP+IISK PL P + GD +W++IV WT +A+VT EELG+T KN++ Sbjct: 202 ANRLKLANPNDHMVLPEIISKEPLGPMVRHGDDQWFDIVKWTLFALVTTEELGVTSKNVD 261 Query: 263 QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKI 322 + +K +P+++R LG D N GE LGLTKDW RI++ +GNYGE+FDRN+G S L I Sbjct: 262 EKAK-LESPELKRVLGSDG--NFGEQLGLTKDWVVRIVKAVGNYGEVFDRNVGAGSPLAI 318 Query: 323 PRGYNALWSKGGLMYAPPIR 342 RG N LW+KGGL YAPPIR Sbjct: 319 NRGLNNLWNKGGLQYAPPIR 338 >gi|83592340|ref|YP_426092.1| lysine-arginine-ornithine-binding periplasmic protein [Rhodospirillum rubrum ATCC 11170] gi|83575254|gb|ABC21805.1| Lysine-arginine-ornithine-binding periplasmic protein [Rhodospirillum rubrum ATCC 11170] Length = 340 Score = 446 bits (1147), Expect = e-123, Method: Composition-based stats. Identities = 170/343 (49%), Positives = 230/343 (67%), Gaps = 4/343 (1%) Query: 1 MYKDFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K S S AS L +K RG + CG+N GL GFA G W G Sbjct: 1 MKKMIAALAAFGAAGVIASGSAMAASTLDTVKSRGEVTCGVNNGLPGFALPDDKGHWTGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CRA+++A+F D K++++PLNAKERF ALQS +ID+LSRNT WT R+ SLGL F Sbjct: 61 DVDICRAVAAAVFGDAKKVKFVPLNAKERFTALQSGEIDVLSRNTTWTQTRDASLGLIFA 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Y+DGQGF++ K+ G+SS +L+GASIC+Q+GTTTEL LADYF+A+ M Y P+VF+ Sbjct: 121 GVNYYDGQGFMVKKELGVSSAKELNGASICIQSGTTTELNLADYFRANAMTYSPVVFDTS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 ++ + RCD T D S LYAL++ + P ++LP++ISK PL P + QGD +W N Sbjct: 181 DQTVQGFAGGRCDVLTSDQSQLYALRIKLEDPKSAIVLPEVISKEPLGPMVRQGDDQWLN 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV W+ +A + AEELG+T N ++V K T+ +V+R LG + +G+ LGL DW Y I Sbjct: 241 IVRWSLFAQLNAEELGVTSANADEV-KAGTDQNVKRLLGTEGE--MGKQLGLGNDWAYAI 297 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++ +GNYGEMF+RN+G S L+I RG NALW+KGG+ YAPPIR Sbjct: 298 VKQVGNYGEMFERNIGKGSPLEIERGLNALWNKGGIQYAPPIR 340 >gi|260596110|ref|YP_003208681.1| putative amino-acid ABC transporter-binding protein yhdW [Cronobacter turicensis z3032] gi|260215287|emb|CBA27219.1| Putative amino-acid ABC transporter-binding protein yhdW [Cronobacter turicensis z3032] Length = 353 Score = 446 bits (1147), Expect = e-123, Method: Composition-based stats. Identities = 162/343 (47%), Positives = 233/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K ++ LF + +A + L +KK+GF++CGI+ GL GF+ A G + G Sbjct: 13 MKKMMIATLAAAGTLFAVANQAHAGATLDSVKKKGFVQCGISDGLPGFSYADAGGKFTGI 72 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D SK++Y PL AKERF ALQS ++D+LSRNT WT R+ +G++F Sbjct: 73 DVDVCRGVAAAVFGDASKVKYTPLTAKERFTALQSGEVDVLSRNTTWTSSRDAGMGMSFT 132 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R Sbjct: 133 GVTYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 192 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + +GD EW++ Sbjct: 193 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDEEWFS 252 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GI KN++ + + + PD+ LG + + G+ L L W Y I Sbjct: 253 IVRWTLFAMLNAEEMGIDSKNVDAKAANPSTPDMAHLLGKEG--DYGKDLKLDNKWAYNI 310 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNYGE+F+RN+G +S LKI RG N LW+KGG+ YAPP+R Sbjct: 311 IKQVGNYGEIFERNVGQESPLKIKRGQNNLWNKGGIQYAPPVR 353 >gi|283836183|ref|ZP_06355924.1| general amino acid ABC transporter, periplasmic binding protein [Citrobacter youngae ATCC 29220] gi|291067534|gb|EFE05643.1| general amino acid ABC transporter, periplasmic binding protein [Citrobacter youngae ATCC 29220] Length = 341 Score = 446 bits (1147), Expect = e-123, Method: Composition-based stats. Identities = 160/343 (46%), Positives = 233/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K S+ +L + +A + L +KK+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKMIIASLAAAGVLLAIANQAHAGATLDAVKKKGFVQCGISDGLPGFSYADASGKFSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR ++SA+F D SK++Y PL AKERF ALQS ++D+LSRNT WT R+ +G++F Sbjct: 61 DVDVCRGVASAVFGDDSKVKYTPLTAKERFTALQSGEVDMLSRNTTWTSSRDAGMGMSFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + +GD EW++ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+G+ KN+++ + + PD+ LG + + G+ L L W Y I Sbjct: 241 IVRWTLFAMLNAEEMGVNSKNVDEKAANPATPDMAHLLGKEG--DYGKDLKLDNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341 >gi|149191354|ref|ZP_01869607.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio shilonii AK1] gi|148834833|gb|EDL51817.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio shilonii AK1] Length = 342 Score = 445 bits (1146), Expect = e-123, Method: Composition-based stats. Identities = 170/345 (49%), Positives = 233/345 (67%), Gaps = 6/345 (1%) Query: 1 MYKDFFV---SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K + + + TS S L + K G L CG++TGL GF+ + G+W+ Sbjct: 1 MAKKLTLIASLVAASAAMMSTSASAADGTLDKVTKAGVLTCGVSTGLPGFSNPNSKGEWE 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G DV++C+AL++A+ D SK++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL Sbjct: 61 GIDVEYCQALAAAVLGDKSKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDSALGLN 120 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F + Y+DGQGF++ K G+SS +L GAS+CVQ+GTTTEL LADYF+ + M+Y P+VF+ Sbjct: 121 FVGVNYYDGQGFMVKKDLGLSSAKELDGASVCVQSGTTTELNLADYFRNNGMEYKPVVFD 180 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + + + RCD T D S LYAL+L PS V+LP+IISK PL P + QGD +W Sbjct: 181 TAAQTSKGFDSGRCDVLTTDQSGLYALRLNLQDPSSAVVLPEIISKEPLGPVVRQGDDQW 240 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297 +NI WT AMV AEE GIT KN +++ K + +P+++R LG+D G+ LG+ DW Y Sbjct: 241 FNIAKWTLAAMVNAEEYGITSKNADEMLK-SKDPNIKRILGVDGPK--GKGLGIRDDWGY 297 Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +II+ +GNYGE F+R +G S L+I RG NALW+ GG MYAPPIR Sbjct: 298 QIIKQVGNYGESFERTVGEGSPLQISRGVNALWNAGGFMYAPPIR 342 >gi|262404012|ref|ZP_06080567.1| amino acid ABC transporter amino acid-binding protein [Vibrio sp. RC586] gi|262349044|gb|EEY98182.1| amino acid ABC transporter amino acid-binding protein [Vibrio sp. RC586] Length = 342 Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats. Identities = 170/338 (50%), Positives = 232/338 (68%), Gaps = 3/338 (0%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 I L S S S L + +GF+ CG++TGL GF+ A GDW+G DV++C Sbjct: 8 LASVIAASSALMTYSASAAESTLDKVLSQGFITCGVSTGLPGFSNPNAKGDWEGIDVEYC 67 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 +AL++A+ D +K++++PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F + Y+ Sbjct: 68 QALAAAVLGDKTKVKFVPLTAKERFTALQSGEIDVLSRNTTWTLQRDSALGLNFVGVNYY 127 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 DGQGF++ K GI S +L GAS+CVQ+GTTTEL LADYF+ + MKY P+VF+ + Sbjct: 128 DGQGFMVKKDLGIKSAKELDGASVCVQSGTTTELNLADYFRNNGMKYKPVVFDTSAQTSK 187 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + A RCD T D S LYAL+L ++P V+LP+IISK PL P + Q D +W+N+ W Sbjct: 188 GFDAGRCDVLTTDQSGLYALRLNLEKPDAAVVLPEIISKEPLGPVVRQDDDKWFNVAKWV 247 Query: 245 HYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMG 304 YAMV AEE GIT KN++++ K + NP+V+R LG+D G LG+ DW+Y+I++ +G Sbjct: 248 LYAMVNAEEYGITSKNVDEMMK-SENPEVKRILGLDGPK--GTGLGIRDDWSYQIVKQVG 304 Query: 305 NYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 NYGE F+R +G+ S LKI RG NALW+ GG MYAPPIR Sbjct: 305 NYGESFERTVGSGSPLKIDRGVNALWNAGGFMYAPPIR 342 >gi|229592512|ref|YP_002874631.1| putative ABC transporter periplasmic solute binding protein [Pseudomonas fluorescens SBW25] gi|229364378|emb|CAY52154.1| Putative ABC transport system, periplasmic solute binding protein [Pseudomonas fluorescens SBW25] Length = 342 Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats. Identities = 161/341 (47%), Positives = 227/341 (66%), Gaps = 2/341 (0%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 +K +I L S + L I+K+GF++CG++ GL GF +NG G DV Sbjct: 4 FKTTLAAIGATAALGLASTAQAGVTLDAIQKKGFIQCGVSDGLPGFGVPDSNGKMTGIDV 63 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D C A+++A+F D SK+++ L AKERF ALQS +ID++SRNT WT R+ +GL F + Sbjct: 64 DVCHAVAAAVFGDASKVKFTQLTAKERFTALQSGEIDMISRNTTWTSSRDSGMGLVFTGV 123 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 TY+DG GF+++ K G++ QL GA++C+QAGTTTEL ++DYF+ + MKY PI F+ +E Sbjct: 124 TYYDGIGFLVNNKLGVTGAKQLDGATVCIQAGTTTELNVSDYFRTNGMKYTPITFDTADE 183 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A RCD T D S LYA ++ P E V+LP++ISK PL P + +GD EW++IV Sbjct: 184 SAKGLEAGRCDVLTTDQSGLYAQRIKMAHPDEFVVLPEVISKEPLGPLVRKGDDEWFSIV 243 Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301 WT +AM+ AEE+GIT +N+ + +K T NPD+ R LG D G+ L L KDW +I++ Sbjct: 244 KWTLFAMLNAEEMGITSQNVEEQAKTTKNPDIARLLGADGE--YGKDLKLRKDWVVQIVK 301 Query: 302 HMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGE+F+RN+G S LKI RG NALW+ GG+ YAPP+R Sbjct: 302 QVGNYGEVFERNIGQGSVLKIKRGLNALWNNGGIQYAPPVR 342 >gi|222148880|ref|YP_002549837.1| ABC transporter substrate binding protein (amino acid) [Agrobacterium vitis S4] gi|221735866|gb|ACM36829.1| ABC transporter substrate binding protein (amino acid) [Agrobacterium vitis S4] Length = 341 Score = 445 bits (1144), Expect = e-123, Method: Composition-based stats. Identities = 176/342 (51%), Positives = 242/342 (70%), Gaps = 1/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L F + + +A L D+K +GF++CG++ G+ GF+ GDW G D Sbjct: 1 MKKTLLSVALGAAAFGFGASAASADTLSDVKAKGFVQCGVSQGIPGFSAPNDKGDWSGLD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+CR +++A+F D SK ++ P++AK+RF ALQS +ID+L+RNT WT+ R+ SLG FR Sbjct: 61 VDYCRGIAAAVFGDASKAKFTPVSAKDRFPALQSGEIDVLTRNTTWTISRDTSLGFNFRT 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF+ K + S +LSGA++CVQ GTTTEL LADYFKA+ +KY+P+VFE+ + Sbjct: 121 VNYYDGQGFMAKKSLNVKSALELSGAAVCVQTGTTTELNLADYFKANGLKYNPVVFEKED 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + AAY A RCD YT D S LYA++L P ++V+LP++ISK PL PA+ QGD +W+++ Sbjct: 181 DATAAYDAGRCDVYTTDQSGLYAIRLKLKNPDDNVVLPEVISKEPLGPAVRQGDDKWFDV 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 VSW HYAMV AEE G+T KNI+ + + PD++R LG + S +G LGL +DW Y +I Sbjct: 241 VSWVHYAMVNAEEAGVTSKNIDDLKANG-GPDIKRMLGAEAGSKLGTDLGLKEDWAYNVI 299 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+FDRN+G S LKI RG NALWSKGGL Y PPIR Sbjct: 300 KLVGNYGEVFDRNVGVGSPLKIARGVNALWSKGGLQYGPPIR 341 >gi|170743936|ref|YP_001772591.1| cationic amino acid ABC transporter periplasmic binding protein [Methylobacterium sp. 4-46] gi|168198210|gb|ACA20157.1| cationic amino acid ABC transporter, periplasmic binding protein [Methylobacterium sp. 4-46] Length = 340 Score = 445 bits (1144), Expect = e-123, Method: Composition-based stats. Identities = 177/342 (51%), Positives = 239/342 (69%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + L + + + L IK++GF+ CG N GL GF A G W G D Sbjct: 1 MKRIIAALALTASVCLTAGAAQAQATLASIKQKGFIACGSNPGLAGFGVPDAQGRWTGLD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDFCRAL++A+F+D +K++++PL+AK+RF ALQS ++D+LSRNT WT+ R+ +LGL F Sbjct: 61 VDFCRALAAAVFNDTTKVRFIPLSAKDRFTALQSGEVDVLSRNTTWTMSRDTALGLDFPA 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + ++DGQGF++ KK G++S QL GASIC Q GTTTEL LADYF+A+ +KY + F + Sbjct: 121 VNFYDGQGFMVKKKLGVTSAKQLDGASICTQQGTTTELNLADYFRANKLKYEVVAFATSD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E AY + RCDA+T D S LYA +L P ++++LP++ISK PL PA+ GD++W +I Sbjct: 181 ETFKAYDSGRCDAFTTDASGLYAERLRAANPDDNIVLPEVISKEPLGPAVRHGDSQWADI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WTHYAM+ AEE GITQ N++Q+ K T NPDV+R LG + GE +GL+ DW YRII Sbjct: 241 VRWTHYAMLNAEEAGITQANVDQMVKATDNPDVKRILGTEG--KFGEGIGLSNDWAYRII 298 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F+RN+G S LKI RG NALWSKGGL Y PPIR Sbjct: 299 KLVGNYGEVFERNVGQGSPLKIQRGVNALWSKGGLQYGPPIR 340 >gi|28868466|ref|NP_791085.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213967086|ref|ZP_03395235.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato T1] gi|301386368|ref|ZP_07234786.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato Max13] gi|302060650|ref|ZP_07252191.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato K40] gi|302133060|ref|ZP_07259050.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28851704|gb|AAO54780.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213927928|gb|EEB61474.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato T1] gi|331015252|gb|EGH95308.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 342 Score = 445 bits (1144), Expect = e-123, Method: Composition-based stats. Identities = 163/342 (47%), Positives = 229/342 (66%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L T + + L I K+GF++CG++ GL GF+ + G G D Sbjct: 3 MLKSTLAIVTALAAFGVTGAANAGATLDAIVKKGFVQCGVSDGLPGFSVPDSTGKITGID 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D CRA+++A+F D +K+++ LNAKERF ALQS +IDILSRNT WT R+ ++GL F Sbjct: 63 ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDSAMGLMFAG 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DG GF+++KK G++S +L GA+IC+QAGTTTEL ++DYF+++N+KY PI F+ + Sbjct: 123 VTYYDGIGFLVNKKLGVNSAKELDGATICIQAGTTTELNVSDYFRSNNLKYTPITFDTSD 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + RCD T D S LYA + +P ++V+LP++ISK PL P + + D EW+ I Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYVVLPEVISKEPLGPVVRKNDPEWFAI 242 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEE IT KN+ +K T NPDV R LG D + G+ L L KDW +I+ Sbjct: 243 VKWTLFAMLNAEEAKITSKNVEAEAKATKNPDVARMLGADGT--YGKDLNLPKDWVVQIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F+RNLG + LKI RG NALW+ GG+ YAPPIR Sbjct: 301 KQVGNYGEVFERNLGEGTPLKIKRGQNALWNAGGIQYAPPIR 342 >gi|330873115|gb|EGH07264.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 342 Score = 444 bits (1143), Expect = e-123, Method: Composition-based stats. Identities = 163/342 (47%), Positives = 229/342 (66%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L T + + L I K+GF++CG++ GL GF+ + G G D Sbjct: 3 MLKSTLAIVTALTAFGVTGAANAGATLDAIVKKGFVQCGVSDGLPGFSVPDSTGKITGID 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D CRA+++A+F D +K+++ LNAKERF ALQS +IDILSRNT WT R+ ++GL F Sbjct: 63 ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDSAMGLMFAG 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DG GF+++KK G++S +L GA+IC+QAGTTTEL ++DYF+++N+KY PI F+ + Sbjct: 123 VTYYDGIGFLVNKKLGVNSAKELDGATICIQAGTTTELNVSDYFRSNNLKYTPITFDTSD 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + RCD T D S LYA + +P ++V+LP++ISK PL P + + D EW+ I Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYVVLPEVISKEPLGPVVRKNDPEWFAI 242 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEE IT KN+ +K T NPDV R LG D + G+ L L KDW +I+ Sbjct: 243 VKWTLFAMLNAEEAKITSKNVEAEAKATKNPDVARMLGADGT--YGKDLNLPKDWVVQIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F+RNLG + LKI RG NALW+ GG+ YAPPIR Sbjct: 301 KQVGNYGEVFERNLGEGTPLKIKRGQNALWNAGGIQYAPPIR 342 >gi|330963203|gb|EGH63463.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 342 Score = 444 bits (1143), Expect = e-123, Method: Composition-based stats. Identities = 163/342 (47%), Positives = 229/342 (66%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L T + + L I K+GF++CG++ GL GF+ + G G D Sbjct: 3 MLKSTLAIVTALTAFGVTGAANAGTTLDAIVKKGFVQCGVSDGLPGFSVPDSTGKITGID 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D CRA+++A+F D +K+++ LNAKERF ALQS +IDILSRNT WT R+ ++GL F Sbjct: 63 ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDSAMGLMFAG 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DG GF+++KK G++S +L GA+IC+QAGTTTEL ++DYF+++N+KY PI F+ + Sbjct: 123 VTYYDGIGFLVNKKLGVNSAKELDGATICIQAGTTTELNVSDYFRSNNLKYTPITFDTSD 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + RCD T D S LYA + +P ++V+LP++ISK PL P + + D EW+ I Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYVVLPEVISKEPLGPVVRKNDPEWFAI 242 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEE IT KN+ +K T NPDV R LG D + G+ L L KDW +I+ Sbjct: 243 VKWTLFAMLNAEEAKITSKNVEAEAKATKNPDVARMLGADGT--YGKDLNLPKDWVVQIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F+RNLG + LKI RG NALW+ GG+ YAPPIR Sbjct: 301 KQVGNYGEVFERNLGEGTPLKIKRGQNALWNAGGIQYAPPIR 342 >gi|146313341|ref|YP_001178415.1| extracellular solute-binding protein [Enterobacter sp. 638] gi|145320217|gb|ABP62364.1| amino acid ABC transporter substrate-binding protein, PAAT family [Enterobacter sp. 638] Length = 341 Score = 444 bits (1142), Expect = e-123, Method: Composition-based stats. Identities = 162/343 (47%), Positives = 232/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K S+ +LF + +A + L +KK+GF++CGI+ GL GF+ ANG + G Sbjct: 1 MKKTMIASLAAAGMLFAVAGQAHAGATLDAVKKKGFVQCGISDGLPGFSYADANGKFSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +G+ F Sbjct: 61 DVDVCRGVAAALFGDDTKVKYTPLTAKERFTALQSGEVDVLSRNTTWTSSRDAGMGMTFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+ MKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + +GD EW + Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDEEWTS 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GI KN+++ + + PD+ LG + + G+ L L W Y I Sbjct: 241 IVKWTLFAMLNAEEMGINSKNVDEKAAAPSTPDMAHLLGKEG--DYGKDLKLDNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+H+GNYGE+F RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 IKHVGNYGEIFARNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341 >gi|70728430|ref|YP_258179.1| general amino acid ABC transporter periplasmic binding protein [Pseudomonas fluorescens Pf-5] gi|68342729|gb|AAY90335.1| general amino acid ABC transporter, periplasmic binding protein [Pseudomonas fluorescens Pf-5] Length = 342 Score = 444 bits (1142), Expect = e-122, Method: Composition-based stats. Identities = 159/342 (46%), Positives = 230/342 (67%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ +L + F+ + L ++K+GF++CG++ GL GF+ A G G D Sbjct: 3 MLKSTLAAVTAATVLGMSGFAQAGATLDAVQKKGFVQCGVSDGLPGFSVPDATGKILGID 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D CRA+++A+F D +K+++ LNAKERF ALQS +ID+LSRNT WT R+ +GL F Sbjct: 63 ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDVLSRNTTWTSSRDAGMGLVFAG 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DG GF+++KK G+ S +L GA+IC+QAGTTTEL ++DYF+ + +KY PI F+ + Sbjct: 123 VTYYDGIGFLVNKKLGVKSAKELDGATICIQAGTTTELNVSDYFRGNGLKYTPITFDTSD 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + + RCD T D S LYA + P+++V+LP+ ISK PL P + +GD EW++I Sbjct: 183 ESAKSLESGRCDVLTSDKSQLYAQRSKLATPTDYVVLPETISKEPLGPVVRKGDEEWFSI 242 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEE G+T KN+ +K T NPDV R LG D G+ L L KDW +I+ Sbjct: 243 VKWTLFAMLNAEEAGVTSKNVEAEAKSTKNPDVARLLGADGE--YGKDLKLPKDWVVQIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F++NLG + L I RG NALW+ GG+ YAPP+R Sbjct: 301 KQVGNYGEVFEKNLGKSTPLAIDRGLNALWNNGGIQYAPPVR 342 >gi|330969254|gb|EGH69320.1| extracellular solute-binding protein [Pseudomonas syringae pv. aceris str. M302273PT] Length = 342 Score = 444 bits (1142), Expect = e-122, Method: Composition-based stats. Identities = 161/342 (47%), Positives = 227/342 (66%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L + + L IKK+GF++CG++ GL GF+ + G G D Sbjct: 3 MLKSTLAVVTALAAFGVIGAANAGTTLDAIKKKGFIQCGVSDGLPGFSVPDSTGKITGID 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D CRA+++A+F D +K+++ LNAKERF ALQS +IDILSRNT WT R+ +GL F Sbjct: 63 ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDAGMGLVFTG 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DG GF+++ K G+ S +L GA+IC+QAGTTTEL ++DYF+++ +KY PI F+ + Sbjct: 123 VTYYDGIGFLVNNKLGVKSAKELDGATICIQAGTTTELNVSDYFRSNGLKYTPITFDTSD 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + RCD T D S LYA + +P ++++LP++ISK PL P + +GD EW++I Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYIVLPEVISKEPLGPVVRKGDEEWFSI 242 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEE IT KN+ +K T NPDV R LG D + G+ L L KDW +I+ Sbjct: 243 VRWTLFAMLNAEEAKITSKNVEAEAKSTKNPDVARMLGADGT--YGQDLKLPKDWVVQIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F+RNLG + LKI RG NALW+ GG+ YAPPIR Sbjct: 301 KQVGNYGEVFERNLGEGTPLKIKRGQNALWNAGGIQYAPPIR 342 >gi|312962948|ref|ZP_07777434.1| extracellular solute-binding protein, family 3 [Pseudomonas fluorescens WH6] gi|311282717|gb|EFQ61312.1| extracellular solute-binding protein, family 3 [Pseudomonas fluorescens WH6] Length = 342 Score = 443 bits (1141), Expect = e-122, Method: Composition-based stats. Identities = 159/344 (46%), Positives = 230/344 (66%), Gaps = 4/344 (1%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K ++ +IL + + L I+K+GF++CG++ GL GF + G G Sbjct: 1 MKHLKTSLAAVSVAVILGLAGSAHAGTTLDAIQKKGFIQCGVSDGLPGFGVPDSQGKMTG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 DVD C A+++A+F D SK+++ L AKERF ALQS +ID++SRNT WT R+ +GL F Sbjct: 61 IDVDVCHAVAAAVFGDASKVKFTQLTAKERFTALQSGEIDLISRNTTWTSSRDSGMGLVF 120 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 +TY+DG GF+++ K G+++ QL+GA++C+QAGTTTEL ++DYF+ H MKY PI F+ Sbjct: 121 TGVTYYDGIGFLVNNKLGVTAAKQLNGATVCIQAGTTTELNVSDYFRTHGMKYTPITFDT 180 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +E A RCD T D S LYA ++ P E V+LP++ISK PL P + +GD EW+ Sbjct: 181 ADESAKGLEAGRCDVLTTDQSGLYAQRIKMAHPEEFVVLPEVISKEPLGPLVRKGDDEWF 240 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298 +IV WT +AM+ AEE+GIT +N+ + ++ + NPDV R LG D G+ L L +DW + Sbjct: 241 SIVKWTLFAMLNAEEMGITSQNVEEQARTSKNPDVARLLGADGE--YGKDLKLRRDWVVQ 298 Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I++ +GNYGE+F+RN+G S LKI RG NALW+ GG+ YAPP+R Sbjct: 299 IVKQVGNYGEVFERNIGQGSVLKIKRGLNALWNNGGIQYAPPVR 342 >gi|330950965|gb|EGH51225.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae Cit 7] Length = 342 Score = 443 bits (1141), Expect = e-122, Method: Composition-based stats. Identities = 160/342 (46%), Positives = 228/342 (66%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L T + + L I+K+GF++CG++ GL GF+ + G G D Sbjct: 3 MLKSTLAVVTALAAFGVTGAANAGATLDAIQKKGFIQCGVSDGLPGFSVPDSTGKITGID 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D CRA+++A+F D +K+++ LNAKERF ALQS +IDILSRNT WT R+ +GL F Sbjct: 63 ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDAGMGLVFTG 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DG GF+++ K G+ S +L GA+IC+QAGTTTEL ++DYF+++ +KY PI F+ + Sbjct: 123 VTYYDGIGFLVNNKLGVKSAKELDGATICIQAGTTTELNVSDYFRSNGLKYTPITFDTSD 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + RCD T D S LYA + +P ++++LP++ISK PL P + +GD +W++I Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYIVLPEVISKEPLGPVVRKGDEDWFSI 242 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEE IT KN+ +K T NPDV R LG D + G+ L L KDW +I+ Sbjct: 243 VRWTLFAMLNAEEAKITSKNVEAEAKSTKNPDVARMLGADGT--YGKDLKLPKDWVVQIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F+RNLG + LKI RG NALW+ GG+ YAPPIR Sbjct: 301 KQVGNYGEVFERNLGEGTPLKIKRGQNALWNAGGIQYAPPIR 342 >gi|66044325|ref|YP_234166.1| extracellular solute-binding protein [Pseudomonas syringae pv. syringae B728a] gi|63255032|gb|AAY36128.1| extracellular solute-binding protein, family 3 [Pseudomonas syringae pv. syringae B728a] Length = 342 Score = 443 bits (1141), Expect = e-122, Method: Composition-based stats. Identities = 161/342 (47%), Positives = 227/342 (66%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L + + L IKK+GF++CG++ GL GF+ + G G D Sbjct: 3 MLKSTLAVVTALAAFGVIGAANAGTTLDAIKKKGFIQCGVSDGLPGFSVPDSTGKITGID 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D CRA+++A+F D +K+++ LNAKERF ALQS +IDILSRNT WT R+ +GL F Sbjct: 63 ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDAGMGLVFTG 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DG GF+++ K G+ S +L GA+IC+QAGTTTEL ++DYF+++ +KY PI F+ + Sbjct: 123 VTYYDGIGFLVNNKLGVKSAKELDGATICIQAGTTTELNVSDYFRSNGLKYTPITFDTSD 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + RCD T D S LYA + +P ++++LP++ISK PL P + +GD EW++I Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYIVLPEVISKEPLGPVVRKGDEEWFSI 242 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEE IT KN+ +K T NPDV R LG D + G+ L L KDW +I+ Sbjct: 243 VRWTLFAMLNAEEAKITSKNVEAEAKSTKNPDVARMLGADGT--YGKDLKLEKDWVVQIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F+RNLG + LKI RG NALW+ GG+ YAPPIR Sbjct: 301 KQVGNYGEVFERNLGEGTPLKIKRGQNALWNAGGIQYAPPIR 342 >gi|260768536|ref|ZP_05877470.1| amino acid ABC transporter amino acid-binding protein [Vibrio furnissii CIP 102972] gi|260616566|gb|EEX41751.1| amino acid ABC transporter amino acid-binding protein [Vibrio furnissii CIP 102972] gi|315180248|gb|ADT87162.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio furnissii NCTC 11218] Length = 342 Score = 443 bits (1141), Expect = e-122, Method: Composition-based stats. Identities = 170/340 (50%), Positives = 233/340 (68%), Gaps = 4/340 (1%) Query: 4 DFFVSILCL-IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 S++ L S S S L + +GFL CG++TGL GF+ A G+W+G DV+ Sbjct: 6 TLLASVVAASTALMANSASAADSTLDKVLSQGFLTCGVSTGLPGFSNPNAKGEWEGIDVE 65 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 +C+AL++A+ D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F + Sbjct: 66 YCQALAAAVLGDKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDSALGLNFVGVN 125 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y+DGQGF++ K GISS +L GAS+CVQ+GTTTEL LADYF+ + M Y P+VF+ + Sbjct: 126 YYDGQGFMVKKDLGISSAKELDGASVCVQSGTTTELNLADYFRNNGMSYKPVVFDTAAQT 185 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + A RCD T D S LYAL+L ++P V+LP+IISK PL P + Q D +W+N+ Sbjct: 186 SKGFDAGRCDVLTTDQSGLYALRLNLEKPDSAVVLPEIISKEPLGPVVRQDDDKWFNVAK 245 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302 WT +AMV AEE GIT KN +++ K + NP+V+R LG+D G+ LG+ DW Y+I++ Sbjct: 246 WTLFAMVNAEEYGITSKNADEMLK-SDNPEVKRILGVDGPK--GKGLGIRDDWGYQIVKQ 302 Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGE F+R +G S L+I RG NALW+ GG MYAPPIR Sbjct: 303 VGNYGESFERTVGKGSPLQISRGVNALWNAGGFMYAPPIR 342 >gi|85716216|ref|ZP_01047190.1| extracellular solute-binding protein, family 3 [Nitrobacter sp. Nb-311A] gi|85696888|gb|EAQ34772.1| extracellular solute-binding protein, family 3 [Nitrobacter sp. Nb-311A] Length = 344 Score = 443 bits (1140), Expect = e-122, Method: Composition-based stats. Identities = 167/323 (51%), Positives = 232/323 (71%), Gaps = 3/323 (0%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 + + L +K+RG L CG+ GL GF+ G+W G DVD CRA+++ +F+DPSK++ Sbjct: 25 SAKAKTTLDVVKERGVLSCGVTQGLPGFSTPDDKGNWTGLDVDICRAIAAVVFNDPSKVK 84 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 ++PL+AK+RF+ALQ +ID+LSR+T WTL R+ SLG F +TY+DGQGF++ K ++S Sbjct: 85 FVPLSAKDRFIALQWGEIDVLSRDTSWTLSRDTSLGGNFTGVTYYDGQGFLVRKSLKVNS 144 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 +L+ AS+CVQ GTT+E LADYFK++ MKY I F +E AY + RCD +T DIS Sbjct: 145 ALELNSASVCVQTGTTSEQNLADYFKSNKMKYEVIAFGTADETLKAYESGRCDVFTSDIS 204 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 LYA +L P++H +LP++ISK PL P + QGD +W++IV WT +AM+ AEELGITQK Sbjct: 205 QLYAQRLKLLNPADHAVLPEVISKEPLGPMVRQGDDQWFDIVKWTLFAMINAEELGITQK 264 Query: 260 NINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSE 319 N+++ +K + NP+++R LG D N GE LG+TKDW RII+ +GNYGE FDRN+G S Sbjct: 265 NVDEKAK-SENPEIKRVLGTDG--NFGEQLGVTKDWVSRIIKAVGNYGEAFDRNVGAGSP 321 Query: 320 LKIPRGYNALWSKGGLMYAPPIR 342 L I RG N LW++GG+ YAPPIR Sbjct: 322 LGITRGLNRLWNQGGIQYAPPIR 344 >gi|289678218|ref|ZP_06499108.1| extracellular solute-binding protein [Pseudomonas syringae pv. syringae FF5] gi|330975706|gb|EGH75772.1| extracellular solute-binding protein [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 342 Score = 443 bits (1140), Expect = e-122, Method: Composition-based stats. Identities = 161/342 (47%), Positives = 228/342 (66%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L + + L IKK+GF++CG++ GL GF+ + G G D Sbjct: 3 MLKSTLAVVTALAAFGVIGAANAGTTLDAIKKKGFIQCGVSDGLPGFSVPDSTGKITGID 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D CRA+++A+F D +K+++ LNAKERF ALQS +IDILSRNT WT R+ +GL F Sbjct: 63 ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDAGMGLVFTG 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DG GF+++ K G++S +L GA+IC+QAGTTTEL ++DYF+++ +KY PI F+ + Sbjct: 123 VTYYDGIGFLVNNKLGVNSAKELDGATICIQAGTTTELNVSDYFRSNGLKYTPITFDTSD 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + RCD T D S LYA + +P ++++LP++ISK PL P + +GD EW++I Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYIVLPEVISKEPLGPVVRKGDEEWFSI 242 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEE IT KN+ +K T NPDV R LG D + G+ L L KDW +I+ Sbjct: 243 VRWTLFAMLNAEEAKITSKNVEAEAKSTKNPDVARMLGADGT--YGQDLKLPKDWVVQIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F+RNLG + LKI RG NALW+ GG+ YAPPIR Sbjct: 301 KQVGNYGEVFERNLGEGTPLKIKRGQNALWNAGGIQYAPPIR 342 >gi|37679741|ref|NP_934350.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio vulnificus YJ016] gi|37198486|dbj|BAC94321.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio vulnificus YJ016] Length = 375 Score = 443 bits (1140), Expect = e-122, Method: Composition-based stats. Identities = 165/340 (48%), Positives = 230/340 (67%), Gaps = 4/340 (1%) Query: 4 DFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 S++ +S + S L + K+GFL CG++TGL GF+ + G+W+G DV+ Sbjct: 39 TILASLVAASTAMLSSNAFAAESTLDKVTKQGFLTCGVSTGLPGFSNPNSKGEWEGIDVE 98 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 +C+A+++A+ D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F + Sbjct: 99 YCQAIAAAVLGDKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVGVN 158 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y+DGQGF++ K GI S +L GAS+CVQ+GTTTEL LADYF+ M Y P+VF+ + Sbjct: 159 YYDGQGFMVKKDLGIKSAKELDGASVCVQSGTTTELNLADYFRNSGMSYKPVVFDTAAQT 218 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + A RCD T D S LYAL+L P+ V+LP+IISK PL P + QGD +W+NI Sbjct: 219 SKGFDAGRCDVLTTDQSGLYALRLNLQDPNSAVVLPEIISKEPLGPVVRQGDDQWFNIAK 278 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302 WT AM+ AEE GIT KN ++ K + +P+V+R LG+D G+ LG+ DW Y++++ Sbjct: 279 WTLNAMINAEEYGITSKNAEEMLK-SNDPNVKRILGVDGPK--GKGLGIRDDWGYQVVKQ 335 Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGE F+R +G S L+I RG NALW+ GG MYAPPIR Sbjct: 336 VGNYGESFERTVGTGSPLQISRGVNALWNAGGFMYAPPIR 375 >gi|257487410|ref|ZP_05641451.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289628605|ref|ZP_06461559.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289647200|ref|ZP_06478543.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. aesculi str. 2250] gi|298485800|ref|ZP_07003879.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|302188404|ref|ZP_07265077.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. syringae 642] gi|298159826|gb|EFI00868.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330867828|gb|EGH02537.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330887729|gb|EGH20390.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. mori str. 301020] gi|330988313|gb|EGH86416.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. lachrymans str. M301315] gi|331008998|gb|EGH89054.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 342 Score = 443 bits (1139), Expect = e-122, Method: Composition-based stats. Identities = 160/342 (46%), Positives = 228/342 (66%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L T + + L I+K+GF++CG++ GL GF+ + G G D Sbjct: 3 MLKSTLAVVTALAAFGVTGAANAGATLDAIQKKGFVQCGVSDGLPGFSVPDSTGKITGID 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D CRA+++A+F D +K+++ LNAKERF ALQS +IDILSRNT WT R+ +GL F Sbjct: 63 ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDAGMGLVFTG 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DG GF+++ K G+ S +L GA+IC+QAGTTTEL ++DYF+++ +KY PI F+ + Sbjct: 123 VTYYDGIGFLVNNKLGVKSAKELDGATICIQAGTTTELNVSDYFRSNGLKYTPITFDTSD 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + RCD T D S LYA + +P ++++LP++ISK PL P + +GD +W++I Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYIVLPEVISKEPLGPVVRKGDEDWFSI 242 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEE IT KN+ +K T NPDV R LG D + G+ L L KDW +I+ Sbjct: 243 VRWTLFAMLNAEEAKITSKNVEAEAKSTKNPDVARMLGADGT--YGKDLKLPKDWVVQIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F+RNLG + LKI RG NALW+ GG+ YAPPIR Sbjct: 301 KQVGNYGEVFERNLGEGTPLKIKRGQNALWNAGGIQYAPPIR 342 >gi|149376724|ref|ZP_01894482.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Marinobacter algicola DG893] gi|149358963|gb|EDM47429.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Marinobacter algicola DG893] Length = 343 Score = 443 bits (1139), Expect = e-122, Method: Composition-based stats. Identities = 163/344 (47%), Positives = 229/344 (66%), Gaps = 5/344 (1%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K V L +F S ++ A+ L +K++G L+CG+ +GL GF++ G+W G Sbjct: 3 MKNAKSIAVGAAMLCGVFTASVASAATTLESVKEKGHLQCGVTSGLPGFSQPDDKGNWTG 62 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 DVD CRA+++AIF D +++ PL AKERF ALQS +ID+LSRNT WTL R+ SLGL F Sbjct: 63 IDVDTCRAVAAAIFGDAKAVEFTPLTAKERFTALQSGEIDMLSRNTTWTLTRDASLGLNF 122 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + Y+DGQGF+++K G+ +QL GA++C+QAGTTTEL L+DYF+A M+Y PIVF+ Sbjct: 123 AGVNYYDGQGFLVNKGIGVDDATQLDGATVCIQAGTTTELNLSDYFRAKGMEYKPIVFDT 182 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E+ + + RCD T D S L AL+ P ILP+ ISK PL P + QGD +W+ Sbjct: 183 SEQTVQGFASGRCDVLTSDRSQLAALRSKLSDPDSAKILPNTISKEPLGPVVRQGDDQWF 242 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298 NIV W + AEELG+T N++ + K + NP++QR LG D ++G LGL D+ + Sbjct: 243 NIVKWVLSVQINAEELGVTSANVDDMLK-SDNPNIQRLLGTDG--DMGAKLGLPADFGAK 299 Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNYGEM+DRN+G + L + RG NALW++GG+MYAPP+R Sbjct: 300 AIKQVGNYGEMYDRNVGPDTPLGLERGINALWTEGGVMYAPPVR 343 >gi|323492614|ref|ZP_08097758.1| amino acid ABC transporter periplasmic amino acid-binding protein [Vibrio brasiliensis LMG 20546] gi|323312989|gb|EGA66109.1| amino acid ABC transporter periplasmic amino acid-binding protein [Vibrio brasiliensis LMG 20546] Length = 342 Score = 442 bits (1138), Expect = e-122, Method: Composition-based stats. Identities = 169/340 (49%), Positives = 232/340 (68%), Gaps = 4/340 (1%) Query: 4 DFFVSILCL-IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 S++ L TS + S L + K+GFL CG++TGL GF+ + G+W+G DV+ Sbjct: 6 TLLASVVAASTALMSTSAAAADSTLDKVTKQGFLTCGVSTGLPGFSNPNSKGEWEGIDVE 65 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 +C+AL+SA+ D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F + Sbjct: 66 YCQALASAVLGDKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVGVN 125 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y+DGQGF++ K G++S +L GAS+CVQ+GTTTEL LADYF+ M Y P+VF+ + Sbjct: 126 YYDGQGFMVKKDLGLTSAKELDGASVCVQSGTTTELNLADYFRNSGMSYKPVVFDTAAQT 185 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + A RCD T D S LYAL+L PS +LP+IISK PL P + QGD +W+NI Sbjct: 186 SKGFDAGRCDVLTTDQSGLYALRLNLQDPSSAQVLPEIISKEPLGPVVRQGDDQWFNIAK 245 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302 WT AMV AEE GIT KN +++ K + +P+++R LG+D G+ LG+ DW Y++I+ Sbjct: 246 WTLAAMVNAEEYGITSKNADEMLK-SKDPNIKRILGVDGPK--GKGLGIRDDWGYQVIKQ 302 Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGE F+R +G S L+I RG NALW+ GG MYAPPIR Sbjct: 303 VGNYGESFERTVGEGSPLQISRGVNALWNAGGFMYAPPIR 342 >gi|320327255|gb|EFW83269.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330882636|gb|EGH16785.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 342 Score = 442 bits (1138), Expect = e-122, Method: Composition-based stats. Identities = 160/342 (46%), Positives = 229/342 (66%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L T + + L I+K+GF++CG++ GL GF+ + G G D Sbjct: 3 MLKSTLAVVTALAAFGVTGAANAGATLDAIQKKGFVQCGVSDGLPGFSVPDSTGKITGID 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D CRA+++A+F D +K+++ LNAKERF ALQS +IDILSRNT WT R+ +GL F Sbjct: 63 ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDAGMGLVFTG 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DG GF+++ K G+ S +L GA+IC+QAGTTTEL ++DYF+++ +KY PI F+ + Sbjct: 123 VTYYDGIGFLVNNKLGVKSAKELDGATICIQAGTTTELNVSDYFRSNGLKYTPITFDTSD 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + RCD T D S LYA + +P ++++LP++ISK PL P + +GD +W++I Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYIVLPEVISKEPLGPVVRKGDEDWFSI 242 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEE IT KN+ +K T NPDV R LG D + G+ L L KDW +I+ Sbjct: 243 VRWTLFAMLNAEEAKITSKNVEAEAKSTKNPDVARMLGADGT--YGKDLKLPKDWVVQIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F+RNLG+ + LKI RG NALW+ GG+ YAPPIR Sbjct: 301 KQVGNYGEVFERNLGDGTPLKIKRGQNALWNAGGIQYAPPIR 342 >gi|75675721|ref|YP_318142.1| extracellular solute-binding protein [Nitrobacter winogradskyi Nb-255] gi|74420591|gb|ABA04790.1| amino acid ABC transporter substrate-binding protein, PAAT family [Nitrobacter winogradskyi Nb-255] Length = 346 Score = 442 bits (1138), Expect = e-122, Method: Composition-based stats. Identities = 165/349 (47%), Positives = 238/349 (68%), Gaps = 11/349 (3%) Query: 2 YKDFFVSILCLIILFFTSFSTNA--------SILGDIKKRGFLKCGINTGLVGFAEVKAN 53 K F +I ++ ++ + L +K RG L CG++ GL GF+ Sbjct: 1 MKCVFTAIFAIVAGISLQPASAQEQESAKAKTTLEAVKARGALSCGVSQGLPGFSAPDDK 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+W G DVD CRA+++ +F+DP+K++++PL+AK+RF+ALQS +ID+LSR+T WTL R+ S Sbjct: 61 GNWTGLDVDICRAIAAVVFNDPTKVKFVPLSAKDRFIALQSGEIDVLSRDTTWTLSRDTS 120 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 LG F +TY+DGQGF++ K ++S +L+ AS+CVQ GTT E LADYFK++ MKY Sbjct: 121 LGANFTGVTYYDGQGFLIRKSLKVNSALELNSASVCVQTGTTNEQNLADYFKSNKMKYEV 180 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I F +E AY + RCD +T DIS LYA +L P++H +LP++ISK P A + G Sbjct: 181 IAFSTADETIKAYESGRCDVFTSDISQLYAQRLKLINPADHAVLPEVISKEPHATMVRHG 240 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTK 293 D +W+++V WT +AM+ AEELGIT+KN++++++ + NP+++R G D N GE LG+TK Sbjct: 241 DDQWFDLVKWTLFAMINAEELGITKKNVDEMAR-SENPELKRIFGTDG--NFGEQLGVTK 297 Query: 294 DWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 DW RII+ +GNYGE FDRN+G S L I RG N LW++GG+MYAPPIR Sbjct: 298 DWVSRIIKAVGNYGESFDRNVGAGSPLGIARGLNKLWNQGGIMYAPPIR 346 >gi|71735932|ref|YP_273398.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71556485|gb|AAZ35696.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 342 Score = 442 bits (1138), Expect = e-122, Method: Composition-based stats. Identities = 160/342 (46%), Positives = 229/342 (66%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L T + + L I+K+GF++CG++ GL GF+ + G G D Sbjct: 3 MLKSTLAVVTALAAFGVTGVANAGATLDAIQKKGFVQCGVSDGLPGFSVPDSTGKITGID 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D CRA+++A+F D +K+++ LNAKERF ALQS +IDILSRNT WT R+ +GL F Sbjct: 63 ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDAGMGLVFTG 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DG GF+++ K G+ S +L GA+IC+QAGTTTEL ++DYF+++ +KY PI F+ + Sbjct: 123 VTYYDGIGFLVNNKLGVKSAKELDGATICIQAGTTTELNVSDYFRSNGLKYTPITFDTSD 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + RCD T D S LYA + +P ++++LP++ISK PL P + +GD +W++I Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYIVLPEVISKEPLGPVVRKGDEDWFSI 242 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEE IT KN+ +K T NPDV R LG D + G+ L L KDW +I+ Sbjct: 243 VRWTLFAMLNAEEAKITSKNVEAEAKSTKNPDVARMLGADGT--YGKDLKLPKDWVVQIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F+RNLG+ + LKI RG NALW+ GG+ YAPPIR Sbjct: 301 KQVGNYGEVFERNLGDGTPLKIKRGQNALWNAGGIQYAPPIR 342 >gi|157148848|ref|YP_001456167.1| hypothetical protein CKO_04681 [Citrobacter koseri ATCC BAA-895] gi|157086053|gb|ABV15731.1| hypothetical protein CKO_04681 [Citrobacter koseri ATCC BAA-895] Length = 341 Score = 442 bits (1137), Expect = e-122, Method: Composition-based stats. Identities = 156/343 (45%), Positives = 233/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K S+ + +L + +A + L +KK+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKMMIASLAAVGVLLAVANQAHAGATLDAVKKKGFVQCGISDGLPGFSYADASGKFTGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +G++F Sbjct: 61 DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMSFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+ MKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + +GD EW++ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSDPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 +V WT +AM+ AEE+GI +N+++ + + PD+ LG + + G+ L L W Y I Sbjct: 241 VVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKEG--DYGKDLKLDNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 IKQVGNYAEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341 >gi|260778552|ref|ZP_05887444.1| amino acid ABC transporter amino acid-binding protein [Vibrio coralliilyticus ATCC BAA-450] gi|260604716|gb|EEX31011.1| amino acid ABC transporter amino acid-binding protein [Vibrio coralliilyticus ATCC BAA-450] Length = 342 Score = 442 bits (1137), Expect = e-122, Method: Composition-based stats. Identities = 171/340 (50%), Positives = 232/340 (68%), Gaps = 4/340 (1%) Query: 4 DFFVSILCL-IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 S++ L TS S S L + K+GFL CG++TGL GF+ + G+W+G DV+ Sbjct: 6 TLLASVVAASTALMSTSASAADSTLDKVTKQGFLTCGVSTGLPGFSNPNSKGEWEGIDVE 65 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 +C+AL+SA+ D SK++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F + Sbjct: 66 YCQALASAVLGDKSKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVGVN 125 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y+DGQGF++ K G+ S +L GAS+CVQ+GTTTEL LADYF+ + M Y P+VF+ + Sbjct: 126 YYDGQGFMVKKDLGLKSAKELDGASVCVQSGTTTELNLADYFRNNGMSYKPVVFDTAAQT 185 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + A RCD T D S LYAL+L PS +LP+IISK PL P + QGD +W+NI Sbjct: 186 SKGFDAGRCDVLTTDQSGLYALRLNLQDPSSAEVLPEIISKEPLGPVVRQGDDQWFNIAK 245 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302 WT AMV AEE GI+ KN +++ K + +P+V+R LG+D G+ LG+ DW Y++I+ Sbjct: 246 WTLSAMVNAEEYGISSKNADEMLK-SKDPNVKRILGVDGPK--GKGLGIRDDWGYQVIKQ 302 Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGE F+R +G S L+I RG NALW+ GG MYAPPIR Sbjct: 303 VGNYGESFERTVGKGSPLQISRGVNALWNAGGFMYAPPIR 342 >gi|39935626|ref|NP_947902.1| ABC transporter periplasmic amino acid binding protein aapJ-1 [Rhodopseudomonas palustris CGA009] gi|39649479|emb|CAE28001.1| ABC transporter, periplasmic amino acid binding protein aapJ-1 [Rhodopseudomonas palustris CGA009] Length = 338 Score = 442 bits (1136), Expect = e-122, Method: Composition-based stats. Identities = 169/320 (52%), Positives = 235/320 (73%), Gaps = 3/320 (0%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 +A L +K RG L CG++ GL GF+ G+W G DVD CRA+++A+FDDPSK++++P Sbjct: 22 DAQTLKTVKDRGMLSCGVSQGLPGFSAPDDKGNWAGLDVDVCRAIAAAVFDDPSKVKFVP 81 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 L+AK+RF ALQS +ID+LSRNT WTL R+ SLG+ F ++Y+DGQGF+ K ++S + Sbjct: 82 LSAKDRFTALQSGEIDVLSRNTTWTLSRDTSLGVNFAGVSYYDGQGFMAKKSLKVNSALE 141 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+GASICVQ GTT E +ADYFK +NMKY I F +E AY + RCD +T D+S LY Sbjct: 142 LNGASICVQTGTTNEQNVADYFKGNNMKYEVIAFANADEAVKAYESGRCDVFTSDVSQLY 201 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 A +L P++H +LP++ISK PL P + GD +W++IV WT +A+V AEELG+TQKN++ Sbjct: 202 AQRLKLATPADHAVLPEVISKEPLGPLVRHGDDQWFDIVKWTLFALVNAEELGVTQKNVD 261 Query: 263 QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKI 322 +++K + P+++R G D N+GE LGLTKDW RI++ GNYGE F+RN+G+ S+L+I Sbjct: 262 EMAK-SDKPELKRVFGTDG--NLGEQLGLTKDWVARIVKATGNYGESFERNVGSGSKLEI 318 Query: 323 PRGYNALWSKGGLMYAPPIR 342 RG N LW+KGG+MYAPPIR Sbjct: 319 ARGLNKLWNKGGIMYAPPIR 338 >gi|330962155|gb|EGH62415.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 342 Score = 442 bits (1136), Expect = e-122, Method: Composition-based stats. Identities = 161/342 (47%), Positives = 228/342 (66%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L T + + L I+K+GF++CG++ GL GF+ + G G D Sbjct: 3 MLKSTLAVVTALAAFGVTGAANAGATLDAIQKKGFVQCGVSDGLPGFSVPDSTGKITGID 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D CRA+++A+F D +K+++ LNAKERF ALQS +IDILSRNT WT R+ +GL F Sbjct: 63 ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDAGMGLVFTG 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DG GF+++ K G+ S +L GA+IC+QAGTTTEL ++DYF+++ +KY PI F+ + Sbjct: 123 VTYYDGIGFLVNNKLGVKSAKELDGATICIQAGTTTELNVSDYFRSNGLKYTPITFDTSD 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + RCD T D S LYA + +P ++++LP++ISK PL P + +GD EW++I Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYIVLPEVISKEPLGPVVRKGDEEWFSI 242 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEE IT KN+ +K T NPDV R LG D + G+ L L KDW +I+ Sbjct: 243 VRWTLFAMLNAEEAKITSKNVEAEAKATKNPDVARMLGADGT--YGKDLKLPKDWVVKIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F+RNLG + LKI RG NALW+ GG+ YAPPIR Sbjct: 301 KQVGNYGEVFERNLGEGTPLKIKRGQNALWNAGGIQYAPPIR 342 >gi|320325827|gb|EFW81888.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. glycinea str. B076] Length = 342 Score = 441 bits (1134), Expect = e-122, Method: Composition-based stats. Identities = 160/342 (46%), Positives = 229/342 (66%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L T + + L I+K+GF++CG++ GL GF+ + G G D Sbjct: 3 MLKSTLAVVTALAAFGVTGAANAGATLDAIQKKGFVQCGVSDGLPGFSVPDSTGKITGID 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D CRA+++A+F D +K+++ LNAKERF ALQS +IDILSRNT WT R+ +GL F Sbjct: 63 ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDAGMGLVFTG 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DG GF+++ K G+ S +L GA+IC+QAGTTTEL ++DYF+++ +KY PI F+ + Sbjct: 123 VTYYDGIGFLVNNKLGVKSAKELDGATICIQAGTTTELNVSDYFRSNGLKYTPITFDTSD 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + RCD T D S LYA + +P ++++LP++ISK PL P + +GD +W++I Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYIVLPEVISKEPLGPVVRKGDEDWFSI 242 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEE IT KN+ +K T NPDV R LG D + G+ L L KDW +I+ Sbjct: 243 VRWTLFAMLNAEEAKITSKNVEAEAKLTKNPDVARMLGADGT--YGKDLKLPKDWVVQIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F+RNLG+ + LKI RG NALW+ GG+ YAPPIR Sbjct: 301 KQVGNYGEVFERNLGDGTPLKIKRGQNALWNAGGIQYAPPIR 342 >gi|317049795|ref|YP_004117443.1| family 3 extracellular solute-binding protein [Pantoea sp. At-9b] gi|316951412|gb|ADU70887.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b] Length = 341 Score = 441 bits (1134), Expect = e-122, Method: Composition-based stats. Identities = 164/343 (47%), Positives = 231/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K +++ LF + +A L IKK+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKMMLSTLVAAASLFAVAQQAHAGTTLDAIKKKGFVQCGISDGLPGFSYADASGKFTGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CRA ++A+F D SK++Y PL AKERF ALQS ++DILSRNT WT R+ +G F Sbjct: 61 DVDVCRAAAAAVFGDASKVKYTPLTAKERFTALQSGEVDILSRNTTWTSSRDGGMGFLFA 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Y+DG GF+ HKK G+ S +L GA++C+QAGT TEL +ADYFKA+NM+Y P+ F+R Sbjct: 121 GVNYYDGIGFLTHKKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMQYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ +P E ++LP++ISK PL P + +GD +W+ Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDEFIVLPEVISKEPLGPVVRRGDDDWFT 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV W+ YAM+ AEE+GI KN++Q++ +NPD+ LG + + G+ L L W + I Sbjct: 241 IVKWSLYAMLNAEEMGINSKNVDQLAAKPSNPDMAHLLGAEG--DFGKDLKLDNKWAFNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E FDRN+G S LKI RG NALW++GG+ YAPP+R Sbjct: 299 IKQVGNYQESFDRNVGKDSALKIARGQNALWNQGGIQYAPPVR 341 >gi|27365994|ref|NP_761522.1| amino acid ABC transporter periplasmic amino acid-binding protein [Vibrio vulnificus CMCP6] gi|320156509|ref|YP_004188888.1| glutamate aspartate periplasmic binding protein GltI [Vibrio vulnificus MO6-24/O] gi|27362194|gb|AAO11049.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio vulnificus CMCP6] gi|319931821|gb|ADV86685.1| glutamate Aspartate periplasmic binding protein precursor GltI [Vibrio vulnificus MO6-24/O] Length = 342 Score = 441 bits (1134), Expect = e-122, Method: Composition-based stats. Identities = 165/340 (48%), Positives = 230/340 (67%), Gaps = 4/340 (1%) Query: 4 DFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 S++ +S + S L + K+GFL CG++TGL GF+ + G+W+G DV+ Sbjct: 6 TILASLVAASTAMLSSNAFAAESTLDKVTKQGFLTCGVSTGLPGFSNPNSKGEWEGIDVE 65 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 +C+A+++A+ D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F + Sbjct: 66 YCQAIAAAVLGDKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVGVN 125 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y+DGQGF++ K GI S +L GAS+CVQ+GTTTEL LADYF+ M Y P+VF+ + Sbjct: 126 YYDGQGFMVKKDLGIKSAKELDGASVCVQSGTTTELNLADYFRNSGMSYKPVVFDTAAQT 185 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + A RCD T D S LYAL+L P+ V+LP+IISK PL P + QGD +W+NI Sbjct: 186 SKGFDAGRCDVLTTDQSGLYALRLNLQDPNSAVVLPEIISKEPLGPVVRQGDDQWFNIAK 245 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302 WT AM+ AEE GIT KN ++ K + +P+V+R LG+D G+ LG+ DW Y++++ Sbjct: 246 WTLNAMINAEEYGITSKNAEEMLK-SNDPNVKRILGVDGPK--GKGLGIRDDWGYQVVKQ 302 Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGE F+R +G S L+I RG NALW+ GG MYAPPIR Sbjct: 303 VGNYGESFERTVGTGSPLQISRGVNALWNAGGFMYAPPIR 342 >gi|311695087|gb|ADP97960.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [marine bacterium HP15] Length = 347 Score = 440 bits (1133), Expect = e-121, Method: Composition-based stats. Identities = 163/340 (47%), Positives = 232/340 (68%), Gaps = 3/340 (0%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K + I + F + + A+ L ++K++G L+CG+ +GL GF++ G+W G DVD Sbjct: 11 KSIALGIALAVGTFSATGAMAATTLENVKEKGHLQCGVTSGLPGFSQPDEKGNWTGIDVD 70 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 CRA+++AIF D + +++ PL AKERF ALQS +ID+LSRNT WTL R+ SLGL F + Sbjct: 71 TCRAVAAAIFGDANAVEFTPLTAKERFTALQSGEIDMLSRNTTWTLTRDASLGLNFAGVN 130 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y+DGQGF+++K G+ +QL GA+IC+QAGTTTEL L+DYF+A M++ PIVF+ E+ Sbjct: 131 YYDGQGFLINKGIGVDDATQLDGATICIQAGTTTELNLSDYFRAKGMEFKPIVFDTSEQT 190 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + A RCD T D S L AL+ PS ILP+ ISK PL P + QGD +W+NIV Sbjct: 191 VQGFAAGRCDVLTSDRSQLAALRSKLSDPSSAKILPNTISKEPLGPVVRQGDDQWFNIVK 250 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302 W +A + AEELG+T N + + K + NP++QR LG D ++G LGL D+ Y+ ++ Sbjct: 251 WVLFAQINAEELGVTSANADDMLK-SDNPNIQRLLGTDG--DMGAKLGLPDDFGYQAVKL 307 Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGEM+DRN+G + L + RG NALW++GG+MYAPP+R Sbjct: 308 VGNYGEMYDRNVGPDTPLGLDRGINALWTEGGIMYAPPVR 347 >gi|309785598|ref|ZP_07680229.1| general L-amino acid-binding periplasmic protein aapJ [Shigella dysenteriae 1617] gi|308926718|gb|EFP72194.1| general L-amino acid-binding periplasmic protein aapJ [Shigella dysenteriae 1617] Length = 341 Score = 440 bits (1132), Expect = e-121, Method: Composition-based stats. Identities = 156/343 (45%), Positives = 232/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K ++ +L + +A + L ++K+GF++CGI+ GL F+ A+G + G Sbjct: 1 MKKMMIATLAAASVLLAIANQAHAGATLDAVQKKGFVQCGISDGLPRFSYADADGKFSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +G+AF Sbjct: 61 DVDVCRGVAAAVFGDNTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + +GD EW++ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GI +N+++ + + PD+ LG + + G+ L L W Y I Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKEG--DYGKDLKLDNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341 >gi|261252934|ref|ZP_05945507.1| amino acid ABC transporter amino acid-binding protein [Vibrio orientalis CIP 102891] gi|260936325|gb|EEX92314.1| amino acid ABC transporter amino acid-binding protein [Vibrio orientalis CIP 102891] Length = 342 Score = 440 bits (1132), Expect = e-121, Method: Composition-based stats. Identities = 166/340 (48%), Positives = 231/340 (67%), Gaps = 4/340 (1%) Query: 4 DFFVSILCL-IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 S++ L TS S S L + K+GF+ CG++TGL GF+ + G+W+G DV+ Sbjct: 6 TLLASVVAASTALMSTSASAADSTLDKVTKQGFITCGVSTGLPGFSNPNSKGEWEGIDVE 65 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 +C+ L++A+ D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F + Sbjct: 66 YCQGLAAAVLGDKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVGVN 125 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y+DGQGF++ K G++S +L GAS+CVQ+GTTTEL LADYF+ M Y P+VF+ + Sbjct: 126 YYDGQGFMVKKDLGLTSAKELDGASVCVQSGTTTELNLADYFRNSGMSYKPVVFDTAAQT 185 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + A RCD T D S LYAL+L PS +LP+IISK PL P + QGD +W+NI Sbjct: 186 SKGFDAGRCDVLTTDQSGLYALRLNLQDPSSAQVLPEIISKEPLGPVVRQGDDQWFNIAK 245 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302 WT AMV AEE GI+ KN +++ K + +P+++R LG+D G+ LG+ DW Y++I+ Sbjct: 246 WTLAAMVNAEEYGISSKNADEMLK-SKDPNIKRILGVDGPK--GKGLGIRDDWGYQVIKQ 302 Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGE F+R +G S L+I RG NALW+ GG MYAPPIR Sbjct: 303 VGNYGESFERTVGEGSPLQISRGVNALWNAGGFMYAPPIR 342 >gi|271498820|ref|YP_003331845.1| family 3 extracellular solute-binding protein [Dickeya dadantii Ech586] gi|270342375|gb|ACZ75140.1| extracellular solute-binding protein family 3 [Dickeya dadantii Ech586] Length = 343 Score = 440 bits (1131), Expect = e-121, Method: Composition-based stats. Identities = 166/343 (48%), Positives = 236/343 (68%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K +++ LF +A + L I+K+GF++CGI+ GL GF+ ANG + G Sbjct: 3 MKKVIMSTLVASASLFAFINQAHAGATLDAIQKKGFVQCGISDGLPGFSYADANGKYSGI 62 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++AIF D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ S+GL F Sbjct: 63 DVDVCRGVAAAIFGDANKVKYTPLTAKERFTALQSGEVDVLSRNTTWTSSRDGSMGLLFT 122 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFK HNMKY P+ F+R Sbjct: 123 GVTYYDGIGFLAHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKTHNMKYTPVTFDRS 182 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ +P++ V+LP++ISK PL P + +GD +W+ Sbjct: 183 DESAKALDSGRCDTLASDQSQLYALRIKLGKPADFVVLPEVISKEPLGPVVRRGDEDWFA 242 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+G+T +N++Q++ T PD+ LG + N G+ L L DW Y+I Sbjct: 243 IVRWTLFAMLDAEEMGVTSQNVDQMAAKPTTPDMAHLLGKEG--NFGKDLKLPNDWAYKI 300 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++ +GNYGE+F+RN+G SELKI RG N LW+KGG+ YAP +R Sbjct: 301 VKQVGNYGEVFERNVGQGSELKIKRGLNELWNKGGIQYAPAVR 343 >gi|254508781|ref|ZP_05120893.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio parahaemolyticus 16] gi|219548301|gb|EED25314.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio parahaemolyticus 16] Length = 342 Score = 440 bits (1131), Expect = e-121, Method: Composition-based stats. Identities = 167/340 (49%), Positives = 231/340 (67%), Gaps = 4/340 (1%) Query: 4 DFFVSILCLIILFF-TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 S++ F TS S S L + K+GF+ CG++TGL GF+ + G+W+G DV+ Sbjct: 6 TLLASVVAASTAFMATSASAADSTLDKVTKQGFITCGVSTGLPGFSNPNSKGEWEGIDVE 65 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 +C+AL++A+ D SK++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F + Sbjct: 66 YCQALAAAVLGDKSKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVGVN 125 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y+DGQGF++ K G+ S +L GAS+CVQ+GTTTEL LADYF+ M Y P+VF+ + Sbjct: 126 YYDGQGFMVKKDLGLKSAKELDGASVCVQSGTTTELNLADYFRNSGMSYKPVVFDTAAQT 185 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + A RCD T D S LYAL+L P+ +LP+IISK PL P + QGD +W+NI Sbjct: 186 SKGFDAGRCDVLTTDQSGLYALRLNLQDPASAQVLPEIISKEPLGPVVRQGDDQWFNIAK 245 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302 WT AM+ AEE GI+ KN +++ K + +P+V+R LG+D G+ LG+ DW Y++I+ Sbjct: 246 WTLNAMINAEEYGISSKNADEMLK-SKDPNVKRILGVDGPK--GKGLGIRDDWGYQVIKQ 302 Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGE F+R +G S L+I RG NALW+ GG MYAPPIR Sbjct: 303 VGNYGESFERTVGTGSPLQISRGVNALWNAGGFMYAPPIR 342 >gi|292486754|ref|YP_003529624.1| putative ABC transporter periplasmic protein [Erwinia amylovora CFBP1430] gi|292900844|ref|YP_003540213.1| ABC transporter substrate-binding protein [Erwinia amylovora ATCC 49946] gi|291200692|emb|CBJ47825.1| ABC transporter, substrate-binding protein [Erwinia amylovora ATCC 49946] gi|291552171|emb|CBA19208.1| putative ABC transport system, periplasmic component [Erwinia amylovora CFBP1430] gi|312170822|emb|CBX79082.1| putative ABC transport system, periplasmic component [Erwinia amylovora ATCC BAA-2158] Length = 341 Score = 440 bits (1131), Expect = e-121, Method: Composition-based stats. Identities = 161/343 (46%), Positives = 228/343 (66%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K +++ LF + +A L IKK+GF++CGI+ GL GF+ ANG + G Sbjct: 1 MKKMMLSTLVTAAALFTLANQAHAGTTLDAIKKKGFIQCGISDGLPGFSYADANGKFSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CRA ++A+ D K++Y PL AKERF ALQS ++DILSRNT WT R+ +G F Sbjct: 61 DVDVCRAAAAAVLGDAGKVKYTPLTAKERFTALQSGEVDILSRNTTWTSARDGGMGFIFA 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Y+DG GF+ H+K G+ S +L GA++C+QAGT TEL +ADYFKA+ M+Y P+ F+R Sbjct: 121 GVNYYDGIGFLTHQKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMQYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ +P + ++LP++ISK PL P + + D +W+ Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDDFIVLPEVISKEPLGPVVRRDDDDWFT 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV W+ YAM+ AEE+GIT KN++ +S +NPD+ LG + + G+ L L W Y I Sbjct: 241 IVKWSLYAMLNAEEMGITSKNVDSMSAKPSNPDMAHLLGAEG--DYGKDLKLGNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+FDRN+G S+LKI RG NALW+ GG+ YAPP+R Sbjct: 299 IKQVGNYQEVFDRNVGKDSQLKIVRGQNALWNNGGIQYAPPVR 341 >gi|259906955|ref|YP_002647311.1| General L-amino ABC transporter binding protein [Erwinia pyrifoliae Ep1/96] gi|224962577|emb|CAX54032.1| General L-amino ABC transporter binding protein [Erwinia pyrifoliae Ep1/96] gi|283476749|emb|CAY72585.1| putative ABC transport system, periplasmic component [Erwinia pyrifoliae DSM 12163] gi|310766170|gb|ADP11120.1| General L-amino ABC transporter binding protein [Erwinia sp. Ejp617] Length = 341 Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats. Identities = 159/343 (46%), Positives = 228/343 (66%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K +++ LF + +A L IKK+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKMMLSTLVTAAALFTLANQAHAGTTLDAIKKKGFIQCGISDGLPGFSYADASGKFSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CRA ++A+ D K++Y PL AKERF ALQS ++DILSRNT WT R+ +G F Sbjct: 61 DVDVCRAAAAAVLGDAGKVKYTPLTAKERFTALQSGEVDILSRNTTWTSARDGGMGFIFA 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Y+DG GF+ H+K G+ S +L GA++C+QAGT TEL +ADYFKA+ M+Y P+ F+R Sbjct: 121 GVNYYDGIGFLTHQKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMQYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ +P + ++LP++ISK PL P + + D +W+ Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDDFIVLPEVISKEPLGPVVRRDDDDWFT 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV W+ +AM+ AEE+GIT KN++ +S +NPD+ LG + + G+ L L W Y I Sbjct: 241 IVKWSLFAMLNAEEMGITSKNVDSMSAKPSNPDMAHLLGAEG--DFGKDLKLGNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+FDRN+G S+LKI RG NALW+ GG+ YAPP+R Sbjct: 299 IKQVGNYQEVFDRNVGKDSQLKIARGQNALWNNGGIQYAPPVR 341 >gi|86750029|ref|YP_486525.1| extracellular solute-binding protein [Rhodopseudomonas palustris HaA2] gi|86573057|gb|ABD07614.1| extracellular solute-binding protein, family 3 [Rhodopseudomonas palustris HaA2] Length = 337 Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats. Identities = 167/322 (51%), Positives = 231/322 (71%), Gaps = 3/322 (0%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 S A L +K RG L CG++ GL GF+ G+W G DVD CR +++AIFDDPSK+++ Sbjct: 19 SAGAQTLKTVKDRGILSCGVSQGLPGFSAPDDKGNWTGLDVDVCRGIAAAIFDDPSKVKF 78 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +PL+AK+RF ALQS +ID+LSRNT WTL R+ SLG+ F ++Y+DGQGF++ K ++S Sbjct: 79 VPLSAKDRFTALQSGEIDVLSRNTTWTLSRDTSLGVNFAGVSYYDGQGFLVKKALKVNSA 138 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 +L+ AS+CVQ GTT E +ADYFK +NMKY I F +E AY + RCD +T D+S Sbjct: 139 LELNSASVCVQTGTTNEQNVADYFKGNNMKYEVIAFANADEAIKAYESGRCDVFTSDVSQ 198 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 LYA +L P++HV+LP++ISK PL P + GD +W+++V WT +AM+ AEELG+TQ N Sbjct: 199 LYAQRLKLATPADHVVLPEVISKEPLGPLVRHGDDQWFDVVKWTLFAMINAEELGVTQSN 258 Query: 261 INQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSEL 320 + +++K + P+++R G D N+GE LGLTKDW RII+ GNYGE F+RN+G S+L Sbjct: 259 VAEMAK-SDKPELRRVFGTDG--NLGEQLGLTKDWVARIIKATGNYGESFERNVGAGSKL 315 Query: 321 KIPRGYNALWSKGGLMYAPPIR 342 +I RG N W+KGG+MYAPPIR Sbjct: 316 EIARGLNKPWNKGGIMYAPPIR 337 >gi|90410648|ref|ZP_01218664.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Photobacterium profundum 3TCK] gi|90328889|gb|EAS45173.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Photobacterium profundum 3TCK] Length = 342 Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats. Identities = 163/345 (47%), Positives = 239/345 (69%), Gaps = 6/345 (1%) Query: 1 MYKD---FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K F +I LF + S + L + K+G+++CG++ GL GF+ + G+W+ Sbjct: 1 MAKKSSVLFAAIATTSALFAVNASAANTTLEKVMKQGYVQCGVSAGLPGFSNPNSKGEWE 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G DV+FC+A+++A D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL Sbjct: 61 GLDVEFCQAIAAATVGDKTKVKYIPLTAKERFTALQSGEIDVLSRNTTWTLHRDSALGLN 120 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F ++Y+DGQGF++ K+ G+SS +L GA++CVQ+GTTTEL LADYF+ + MKY P+VF+ Sbjct: 121 FAGVSYYDGQGFMVKKELGVSSAKELDGAAVCVQSGTTTELNLADYFRVNGMKYSPVVFD 180 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + + + RCD T D S LYAL+L P+ V+LP++ISK PL P + QGD +W Sbjct: 181 TAPQTSKGFDSGRCDVLTTDQSGLYALRLNLAEPASAVVLPEVISKEPLGPVVRQGDDQW 240 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297 +NIV WT AM+ AEE G+T N++++ K++ +P+++R +G+D G+ LGL+ DW Y Sbjct: 241 FNIVKWTLSAMLNAEEYGVTSANVDKM-KESKDPNIRRLIGLDGPK--GKGLGLSDDWGY 297 Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +I++ +GNYGE F+R +G S LKI RG NALW GG+ YA PIR Sbjct: 298 QIVKQVGNYGESFERTVGTGSPLKIERGLNALWKDGGIQYAAPIR 342 >gi|188532411|ref|YP_001906208.1| General L-amino ABC transporter binding protein [Erwinia tasmaniensis Et1/99] gi|188027453|emb|CAO95300.1| General L-amino ABC transporter binding protein [Erwinia tasmaniensis Et1/99] Length = 341 Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats. Identities = 160/343 (46%), Positives = 228/343 (66%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K +++ LF + +A L IKK+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKMMLSTLVSAAALFSIANQAHAGTTLDAIKKKGFVQCGISDGLPGFSYADASGKFSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CRA ++A+ D K++Y PL AKERF ALQS ++DILSRNT WT R+ +G F Sbjct: 61 DVDVCRAAAAAVLGDAGKVKYTPLTAKERFTALQSGEVDILSRNTTWTSSRDGGMGFIFA 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Y+DG GF+ H+K G+ S +L GA++C+QAGT TEL +ADYFKA+ M+Y P+ F+R Sbjct: 121 GVNYYDGIGFLTHQKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMQYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ +P + ++LP++ISK PL P + + D +W+ Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDDFIVLPEVISKEPLGPVVRRDDNDWFT 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV W+ YAM+ AEE+GIT KN++ +S +NPD+ LG + + G+ L L W Y I Sbjct: 241 IVKWSLYAMLNAEEMGITSKNVDSLSAKPSNPDMSHLLGAEG--DFGKDLKLDNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+FDRN+G S+LKI RG NALW+ GG+ YAPP+R Sbjct: 299 IKQVGNYQEVFDRNVGKDSQLKIARGQNALWNNGGIQYAPPVR 341 >gi|306841324|ref|ZP_07474033.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella sp. BO2] gi|306288627|gb|EFM59963.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella sp. BO2] Length = 339 Score = 438 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 167/342 (48%), Positives = 228/342 (66%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++L A L +K+RG + CG++ G+ GF+ G W GFD Sbjct: 1 MKKTVWGALLAAGFALSVQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDQGKWTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS +D+LSR T WTL R+ +G+ F Sbjct: 61 IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVG 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+DGQGF++ K G+ S +L GASIC + GTTTE +ADYF AHN+KY P+V + + Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSAD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 I A+ RCD YT D SALYA +L P +++LP++ISK PL PA+ QGD +W+NI Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +A++ AEELGITQK + + D+ PDV+RFLG + + G+ LGL W Y I+ Sbjct: 241 VRWTLFALLEAEELGITQKTV-EADLDSRKPDVRRFLGSEG--DNGQQLGLEPKWAYNIV 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGEMF+R +G S LKI RG NALW+KGGLMYAPP++ Sbjct: 298 ASVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339 >gi|159184823|ref|NP_354575.2| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|159140108|gb|AAK87360.2| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 312 Score = 438 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 166/312 (53%), Positives = 234/312 (75%), Gaps = 1/312 (0%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K +GF+ CG++ G+ GF+ G+W G DVD+CR +++A+F DPSK +++ L++K+RF Sbjct: 2 KGKGFVTCGVSAGIPGFSNPDDKGEWSGIDVDYCRGIATAVFGDPSKAKFVALSSKDRFP 61 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150 ALQS ++D+L+RNT WT+ R+ SLG FR + Y+DGQGFI K + S +LSGA++CV Sbjct: 62 ALQSGEVDVLTRNTTWTISRDTSLGFNFRTVNYYDGQGFIAKKGLNVKSALELSGAAVCV 121 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 Q GTTTEL LADYFK +N++Y+P+VFE+ + +AY + RCD YT D S LYA++L Sbjct: 122 QTGTTTELNLADYFKTNNLQYNPVVFEKESDATSAYDSGRCDVYTTDQSGLYAIRLKLKN 181 Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 P ++++LP++ISK PL PA+ QGD +W++IV+W HYAMV AEELGIT KN+++ K + N Sbjct: 182 PDDNIVLPEVISKEPLGPAVRQGDDQWFDIVTWVHYAMVNAEELGITSKNVDE-QKTSAN 240 Query: 271 PDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALW 330 PDV+R LG ++ + IG LG+ DW Y I++ +GNYGE+FDRN+G S LKI RG NALW Sbjct: 241 PDVKRLLGTEEGTKIGTDLGVGNDWAYNIVKLVGNYGEVFDRNVGAGSPLKIERGQNALW 300 Query: 331 SKGGLMYAPPIR 342 +KGGL YAPP+R Sbjct: 301 TKGGLQYAPPVR 312 >gi|304396995|ref|ZP_07378875.1| extracellular solute-binding protein family 3 [Pantoea sp. aB] gi|304355791|gb|EFM20158.1| extracellular solute-binding protein family 3 [Pantoea sp. aB] Length = 341 Score = 438 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 159/343 (46%), Positives = 228/343 (66%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K +++ L + +A L IKK+GF++CGI+ GL GF+ A G + G Sbjct: 1 MKKMMLSTLIAAASLVGLAQQAHAGTTLDAIKKKGFVQCGISDGLPGFSYADAGGKFTGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CRA ++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +G F Sbjct: 61 DVDVCRATAAAVFGDATKVKYTPLTAKERFTALQSGEVDVLSRNTTWTSSRDGGMGFLFA 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Y+DG GF+ HKK G+ S +L GA++C+Q+GT TEL +ADYFKA+ M+Y P+ F+R Sbjct: 121 GVNYYDGIGFLTHKKAGLKSAKELDGATVCIQSGTDTELNVADYFKANKMQYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ +P + ++LP++ISK PL P + +GD +W+ Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDDFIVLPEVISKEPLGPLVRRGDDDWFT 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV W+ YAM+ AEE+GI KN++Q++ T PD+ FLG + + G+ L L W Y I Sbjct: 241 IVKWSLYAMLNAEEMGINSKNVDQMTAKPTTPDMAHFLGAEG--DFGKDLKLDNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++ +GNY E FDRN+G S LKI RG NALW++GG+ YAPP+R Sbjct: 299 VKQVGNYQESFDRNVGKDSALKIARGQNALWNQGGIQYAPPVR 341 >gi|312881587|ref|ZP_07741365.1| amino acid ABC transporter amino acid-binding protein [Vibrio caribbenthicus ATCC BAA-2122] gi|309370650|gb|EFP98124.1| amino acid ABC transporter amino acid-binding protein [Vibrio caribbenthicus ATCC BAA-2122] Length = 342 Score = 438 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 161/340 (47%), Positives = 228/340 (67%), Gaps = 4/340 (1%) Query: 4 DFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 S++ + + L + K+GF+ CG++TGL GF+ + G+W+G DV+ Sbjct: 6 TLLASVVAASSALIATHAFAAGDTLDKVTKQGFITCGVSTGLPGFSNPNSKGEWEGIDVE 65 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 +C+AL+SA+ D K++Y+PL AKERF ALQS ++D+LSRNT WTL R+ +LGL F + Sbjct: 66 YCQALASAVLGDKKKVKYVPLTAKERFTALQSGEVDVLSRNTTWTLHRDTALGLNFVGVN 125 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y+DGQGF++ K G+ S +L GAS+CVQ+GTTTEL LADYF+ MKY P+VF+ + Sbjct: 126 YYDGQGFMVKKDLGLKSAKELDGASVCVQSGTTTELNLADYFRNSGMKYRPVVFDTAAQT 185 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + A RCD T D S LYAL+L P+ +LP+IISK PL P + QGD +W+NI Sbjct: 186 SKGFDAGRCDVLTTDQSGLYALRLNLQDPASAQVLPEIISKEPLGPVVRQGDDQWFNIAK 245 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302 WT AMV AEE GI+ KN +++ K + +P+++R LG++ G+ LG+ DW Y+I++ Sbjct: 246 WTLAAMVNAEEYGISSKNADEMLK-SKDPNIRRILGVEGPK--GKGLGIRDDWGYQIVKQ 302 Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGE F+R +G S L+I RG NALW+ GG MYAPPIR Sbjct: 303 VGNYGESFERTVGQGSPLQISRGVNALWNAGGFMYAPPIR 342 >gi|269968795|ref|ZP_06182784.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio alginolyticus 40B] gi|269826607|gb|EEZ80952.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio alginolyticus 40B] Length = 350 Score = 438 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 166/338 (49%), Positives = 231/338 (68%), Gaps = 3/338 (0%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 + + TS + L + K+GFL CG++TGL GF+ + G+W+G DV++C Sbjct: 16 LASVVAASTAMMATSAQAADTTLDKVTKQGFLTCGVSTGLPGFSNPNSKGEWEGIDVEYC 75 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 +AL++A+ D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F + Y+ Sbjct: 76 QALAAAVLGDKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVGVNYY 135 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 DGQGF++ K+ GISS +L GAS+CVQ+GTTTEL LADYF+ M Y P+VF+ + Sbjct: 136 DGQGFMVKKELGISSAKELDGASVCVQSGTTTELNLADYFRNQGMAYKPVVFDTAAQTSK 195 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + A RCD T D S LYAL+L PS +LP+IISK PL P + QGD +W+NI WT Sbjct: 196 GFDAGRCDVLTTDQSGLYALRLNLKDPSSAAVLPEIISKEPLGPVVRQGDDQWFNIAKWT 255 Query: 245 HYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMG 304 AM+ AEE GI+ KN +++ K +T+P+++R LG+D G+ LG+ DW Y++I+ +G Sbjct: 256 LSAMINAEEYGISSKNADEMLK-STDPNIKRILGVDGPK--GKGLGIRDDWGYQVIKQVG 312 Query: 305 NYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 NYGE F+R +G S L+I RG NALW+ GG MYAPPIR Sbjct: 313 NYGESFERTVGTGSPLEISRGVNALWNAGGFMYAPPIR 350 >gi|156974643|ref|YP_001445550.1| hypothetical protein VIBHAR_02361 [Vibrio harveyi ATCC BAA-1116] gi|156526237|gb|ABU71323.1| hypothetical protein VIBHAR_02361 [Vibrio harveyi ATCC BAA-1116] Length = 350 Score = 438 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 165/338 (48%), Positives = 230/338 (68%), Gaps = 3/338 (0%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 + + TS + L + K+GF+ CG++TGL GF+ + G+W+G DV++C Sbjct: 16 LASVVAASTAMMATSAQAADTTLDKVTKQGFITCGVSTGLPGFSNPNSKGEWEGIDVEYC 75 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 +AL++A+ D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F + Y+ Sbjct: 76 QALAAAVLGDKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVGVNYY 135 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 DGQGF++ K G+SS +L GAS+CVQ+GTTTEL LADYF+ M Y P+VF+ + Sbjct: 136 DGQGFMVKKDLGVSSAKELDGASVCVQSGTTTELNLADYFRNQGMAYKPVVFDTAAQTSK 195 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + A RCD T D S LYAL+L PS +LP+IISK PL P + QGD +W+NI WT Sbjct: 196 GFDAGRCDILTTDQSGLYALRLNLKDPSSATVLPEIISKEPLGPVVRQGDDQWFNIAKWT 255 Query: 245 HYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMG 304 +AMV AEE GI+ KN +++ K + +P+++R LG+D G+ LG+ DW Y++I+ +G Sbjct: 256 LFAMVNAEEYGISSKNADEMLK-SKDPNIKRILGVDGPK--GKGLGIRDDWGYQVIKQVG 312 Query: 305 NYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 NYGE F+R +G S LKI RG NALW+ GG MYAPPIR Sbjct: 313 NYGESFERTVGTGSPLKISRGVNALWNAGGFMYAPPIR 350 >gi|323498373|ref|ZP_08103373.1| amino acid ABC transporter amino acid-binding protein [Vibrio sinaloensis DSM 21326] gi|323316615|gb|EGA69626.1| amino acid ABC transporter amino acid-binding protein [Vibrio sinaloensis DSM 21326] Length = 342 Score = 438 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 167/340 (49%), Positives = 232/340 (68%), Gaps = 4/340 (1%) Query: 4 DFFVSILCLIILFF-TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 S++ F TS S S L + K+GFL CG++TGL GF+ + G+W+G DV+ Sbjct: 6 TLLASVVAASTAFMATSASAADSTLDKVTKQGFLTCGVSTGLPGFSNPNSKGEWEGIDVE 65 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 +C+AL++A+ D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F + Sbjct: 66 YCQALAAAVLGDKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVGVN 125 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y+DGQGF++ K G+ S ++L GAS+CVQ+GTTTEL LADYF+ M Y P+VF+ + Sbjct: 126 YYDGQGFMVKKDLGLKSATELDGASVCVQSGTTTELNLADYFRNSGMSYKPVVFDTAAQT 185 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + A RCD T D S LYAL+L PS +LP+IISK PL P + QGD +W+NI Sbjct: 186 SKGFDAGRCDVLTTDQSGLYALRLNLQDPSSAQVLPEIISKEPLGPVVRQGDDQWFNIAK 245 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302 WT AM+ AEE GI+ KN +++ K + +P+++R LG+D G+ LG+ DW Y++I+ Sbjct: 246 WTLSAMINAEEYGISSKNADEMLK-SKDPNIKRILGVDGPK--GKGLGIRDDWGYQVIKQ 302 Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGE F+R +G S L+I RG NALW+ GG MYAPPIR Sbjct: 303 VGNYGESFERTVGTGSPLQISRGVNALWNAGGFMYAPPIR 342 >gi|54309363|ref|YP_130383.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Photobacterium profundum SS9] gi|46913799|emb|CAG20581.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Photobacterium profundum SS9] Length = 342 Score = 438 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 162/345 (46%), Positives = 237/345 (68%), Gaps = 6/345 (1%) Query: 1 MYKD---FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K +I LF + S + L + K+G+++CG++ GL GF+ + G+W+ Sbjct: 1 MTKKPSVLLAAIATTSALFAVNASAANTTLEKVMKQGYVQCGVSAGLPGFSNPNSKGEWE 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G DV+FC+A+++A D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL Sbjct: 61 GLDVEFCQAIAAATVGDKTKVKYIPLTAKERFTALQSGEIDVLSRNTTWTLHRDSALGLN 120 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F ++Y+DGQGF++ K+ G+SS +L GA++CVQ+GTTTEL LADYF+ + MKY P+VF+ Sbjct: 121 FAGVSYYDGQGFMVKKELGVSSAKELDGAAVCVQSGTTTELNLADYFRVNGMKYSPVVFD 180 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + + + RCD T D S LYAL+L P+ V+LP++ISK PL P + QGD +W Sbjct: 181 TAPQTSKGFDSGRCDVLTTDQSGLYALRLNLADPASAVVLPEVISKEPLGPVVRQGDDQW 240 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297 +NIV WT AM+ AEE G+T N++++ K++ +P+++R +G+D G+ LGL DW Y Sbjct: 241 FNIVKWTLSAMLNAEEYGVTSANVDKM-KESKDPNIRRLIGLDGPK--GKGLGLNDDWGY 297 Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +I++ +GNYGE F+R +G S LKI RG NALW GG+ YA PIR Sbjct: 298 QIVKQVGNYGESFERTVGTGSPLKIERGLNALWKDGGIQYAAPIR 342 >gi|330808961|ref|YP_004353423.1| putative amino acid ABC transporter, periplasmic component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327377069|gb|AEA68419.1| putative amino acid ABC transporter, periplasmic component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 346 Score = 438 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 163/348 (46%), Positives = 230/348 (66%), Gaps = 8/348 (2%) Query: 1 MY--KDFFVSILCLIILFFTSFST----NASILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M K S + L S + L ++KK+GF++CGI+ GL GF+ A G Sbjct: 1 MKQEKKLLKSASTVACLTLGSVFAITAHAGATLDNVKKKGFVQCGISDGLPGFSYADAKG 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 ++ GFDVD CRA+++A+F D K++Y L AKERF ALQS ++D+LSR+T WT R+ ++ Sbjct: 61 EFHGFDVDVCRAVAAAVFGDAKKVKYTQLTAKERFTALQSGEVDMLSRSTTWTSSRDGAM 120 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 G+ F + Y+DGQGF+++KK G+ S +L GA+ C+QAGT TEL L+DYF+++ MKY PI Sbjct: 121 GIQFTNVAYYDGQGFLVNKKLGVKSARELDGATFCIQAGTVTELNLSDYFRSNGMKYTPI 180 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 F+ +E A + RCD T D S LY +L P + +LPD+ISK PL PA+ +GD Sbjct: 181 TFDTSDESFKALESGRCDVLTTDQSQLYGQRLKLATPDDFAVLPDVISKEPLTPAVRRGD 240 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKD 294 +W+ +V W+ AM+ AEELGIT KN+ + K + NPD+ R LG + + +G+ L L D Sbjct: 241 EDWFTVVRWSLAAMLNAEELGITSKNVADMVKSSKNPDIARLLGTEGA--LGKDLNLPND 298 Query: 295 WTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 W +II +GNYGE F+RNLG S++KI RG NALWS+GGL YAPP+R Sbjct: 299 WAAKIIAQVGNYGESFERNLGTGSDMKIKRGLNALWSQGGLQYAPPVR 346 >gi|307129011|ref|YP_003881027.1| amino acid ABC transporter periplasmic amino acid-binding protein [Dickeya dadantii 3937] gi|306526540|gb|ADM96470.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Dickeya dadantii 3937] Length = 341 Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats. Identities = 167/343 (48%), Positives = 235/343 (68%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K +++ LF +A + L I+K+GF++CGI+ GL GF+ ANG + G Sbjct: 1 MKKVIMSTLVASASLFAFINQAHAGATLDAIQKKGFVQCGISDGLPGFSYADANGKYSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++AIF D +K+++ PL AKERF ALQS ++D+LSRNT WT R+ +GL F Sbjct: 61 DVDVCRGVAAAIFGDANKVKFTPLTAKERFTALQSGEVDLLSRNTTWTSSRDGGMGLLFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFK HNMKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKTHNMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ +P++ V+LP++ISK PL P + +GD +WY Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPADFVVLPEVISKEPLGPVVRRGDEDWYA 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GIT +N++Q++ T PD+ LG + N G+ L L DW Y+I Sbjct: 241 IVRWTLFAMLNAEEMGITSQNVDQMAAKPTTPDMSHLLGKEG--NYGKDLKLPADWAYKI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++ +GNYGE+F+RN+G SELKI RG N LW+KGG+ YAP IR Sbjct: 299 VKQVGNYGEVFERNVGQGSELKIKRGLNELWNKGGIQYAPAIR 341 >gi|153835228|ref|ZP_01987895.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio harveyi HY01] gi|148868294|gb|EDL67426.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio harveyi HY01] Length = 342 Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats. Identities = 165/338 (48%), Positives = 230/338 (68%), Gaps = 3/338 (0%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 + + TS + L + K+GF+ CG++TGL GF+ + G+W+G DV++C Sbjct: 8 LASVVAASTAMMATSAQAADTTLDKVTKQGFITCGVSTGLPGFSNPNSKGEWEGIDVEYC 67 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 +AL++A+ D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F + Y+ Sbjct: 68 QALAAAVLGDKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVGVNYY 127 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 DGQGF++ K G+SS +L GAS+CVQ+GTTTEL LADYF+ M Y P+VF+ + Sbjct: 128 DGQGFMVKKDLGVSSAKELDGASVCVQSGTTTELNLADYFRNQGMAYKPVVFDTAAQTSK 187 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + A RCD T D S LYAL+L PS +LP+IISK PL P + QGD +W+NI WT Sbjct: 188 GFDAGRCDVLTTDQSGLYALRLNLKDPSSATVLPEIISKEPLGPVVRQGDDQWFNIAKWT 247 Query: 245 HYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMG 304 +AMV AEE GI+ KN +++ K + +P+++R LG+D G+ LG+ DW Y++I+ +G Sbjct: 248 LFAMVNAEEYGISSKNADEMLK-SKDPNIKRILGVDGPK--GKGLGIRDDWGYQVIKQVG 304 Query: 305 NYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 NYGE F+R +G S LKI RG NALW+ GG MYAPPIR Sbjct: 305 NYGESFERTVGTGSPLKISRGVNALWNAGGFMYAPPIR 342 >gi|148557994|ref|YP_001257868.1| amino acid ABC transporter periplasmic amino acid-binding protein [Brucella ovis ATCC 25840] gi|225629405|ref|ZP_03787438.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella ceti str. Cudo] gi|225686709|ref|YP_002734681.1| amino-acid ABC transporter-binding protein yhdW [Brucella melitensis ATCC 23457] gi|254705588|ref|ZP_05167416.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella pinnipedialis M163/99/10] gi|254710821|ref|ZP_05172632.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella pinnipedialis B2/94] gi|256015709|ref|YP_003105718.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella microti CCM 4915] gi|256043818|ref|ZP_05446739.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella melitensis bv. 1 str. Rev.1] gi|256058889|ref|ZP_05449103.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella neotomae 5K33] gi|256157396|ref|ZP_05455314.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella ceti M490/95/1] gi|256253625|ref|ZP_05459161.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella ceti B1/94] gi|256262158|ref|ZP_05464690.1| solute-binding protein/glutamate receptor [Brucella melitensis bv. 2 str. 63/9] gi|260167705|ref|ZP_05754516.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella sp. F5/99] gi|260564999|ref|ZP_05835484.1| solute-binding protein/glutamate receptor [Brucella melitensis bv. 1 str. 16M] gi|261220761|ref|ZP_05935042.1| extracellular solute-binding protein [Brucella ceti B1/94] gi|261312993|ref|ZP_05952190.1| extracellular solute-binding protein family 3 [Brucella pinnipedialis M163/99/10] gi|261318389|ref|ZP_05957586.1| extracellular solute-binding protein family 3 [Brucella pinnipedialis B2/94] gi|261322825|ref|ZP_05962022.1| extracellular solute-binding protein [Brucella neotomae 5K33] gi|261757141|ref|ZP_06000850.1| solute-binding protein/glutamate receptor [Brucella sp. F5/99] gi|265990242|ref|ZP_06102799.1| extracellular solute-binding protein family 3 [Brucella melitensis bv. 1 str. Rev.1] gi|265995884|ref|ZP_06108441.1| extracellular solute-binding protein [Brucella ceti M490/95/1] gi|294853902|ref|ZP_06794574.1| general L-amino acid transport system substrate-binding protein [Brucella sp. NVSL 07-0026] gi|148369279|gb|ABQ62151.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella ovis ATCC 25840] gi|225615901|gb|EEH12950.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella ceti str. Cudo] gi|225642814|gb|ACO02727.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella melitensis ATCC 23457] gi|255998369|gb|ACU50056.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella microti CCM 4915] gi|260152642|gb|EEW87735.1| solute-binding protein/glutamate receptor [Brucella melitensis bv. 1 str. 16M] gi|260919345|gb|EEX85998.1| extracellular solute-binding protein [Brucella ceti B1/94] gi|261297612|gb|EEY01109.1| extracellular solute-binding protein family 3 [Brucella pinnipedialis B2/94] gi|261298805|gb|EEY02302.1| extracellular solute-binding protein [Brucella neotomae 5K33] gi|261302019|gb|EEY05516.1| extracellular solute-binding protein family 3 [Brucella pinnipedialis M163/99/10] gi|261737125|gb|EEY25121.1| solute-binding protein/glutamate receptor [Brucella sp. F5/99] gi|262550181|gb|EEZ06342.1| extracellular solute-binding protein [Brucella ceti M490/95/1] gi|263000911|gb|EEZ13601.1| extracellular solute-binding protein family 3 [Brucella melitensis bv. 1 str. Rev.1] gi|263091858|gb|EEZ16180.1| solute-binding protein/glutamate receptor [Brucella melitensis bv. 2 str. 63/9] gi|294819557|gb|EFG36557.1| general L-amino acid transport system substrate-binding protein [Brucella sp. NVSL 07-0026] gi|326411105|gb|ADZ68169.1| amino-acid ABC transporter-binding protein yhdW [Brucella melitensis M28] gi|326554396|gb|ADZ89035.1| amino-acid ABC transporter-binding protein yhdW [Brucella melitensis M5-90] Length = 339 Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats. Identities = 166/342 (48%), Positives = 227/342 (66%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++L A L +K+RG + CG++ G+ GF+ G W GFD Sbjct: 1 MKKTVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDQGKWTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS +D+LSR T WTL R+ +G+ F Sbjct: 61 IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVG 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+DGQGF++ K G+ S +L GASIC + GTTTE +ADYF AHN+KY P+V + + Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSAD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 I A+ RCD YT D SALYA +L P +++LP++ISK PL PA+ QGD +W+NI Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +A++ AEELGITQK + D+ PD++RFLG + + G+ LGL W Y I+ Sbjct: 241 VRWTLFALLEAEELGITQKTV-AADLDSRKPDIRRFLGSEG--DNGQQLGLEPKWAYNIV 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGEMF+R +G S LKI RG NALW+KGGLMYAPP++ Sbjct: 298 ASVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339 >gi|91227965|ref|ZP_01262075.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio alginolyticus 12G01] gi|91188286|gb|EAS74584.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio alginolyticus 12G01] Length = 342 Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats. Identities = 166/338 (49%), Positives = 231/338 (68%), Gaps = 3/338 (0%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 + + TS + L + K+GFL CG++TGL GF+ + G+W+G DV++C Sbjct: 8 LASVVAASTAMMATSAQAADTTLDKVTKQGFLTCGVSTGLPGFSNPNSKGEWEGIDVEYC 67 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 +AL++A+ D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F + Y+ Sbjct: 68 QALAAAVLGDKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVGVNYY 127 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 DGQGF++ K+ GISS +L GAS+CVQ+GTTTEL LADYF+ M Y P+VF+ + Sbjct: 128 DGQGFMVKKELGISSAKELDGASVCVQSGTTTELNLADYFRNQGMAYKPVVFDTAAQTSK 187 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + A RCD T D S LYAL+L PS +LP+IISK PL P + QGD +W+NI WT Sbjct: 188 GFDAGRCDVLTTDQSGLYALRLNLKDPSSAAVLPEIISKEPLGPVVRQGDDQWFNIAKWT 247 Query: 245 HYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMG 304 AM+ AEE GI+ KN +++ K +T+P+++R LG+D G+ LG+ DW Y++I+ +G Sbjct: 248 LSAMINAEEYGISSKNADEMLK-STDPNIKRILGVDGPK--GKGLGIRDDWGYQVIKQVG 304 Query: 305 NYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 NYGE F+R +G S L+I RG NALW+ GG MYAPPIR Sbjct: 305 NYGESFERTVGTGSPLEISRGVNALWNAGGFMYAPPIR 342 >gi|262394189|ref|YP_003286043.1| amino acid ABC transporter amino acid-binding protein [Vibrio sp. Ex25] gi|262337783|gb|ACY51578.1| amino acid ABC transporter amino acid-binding protein [Vibrio sp. Ex25] Length = 342 Score = 437 bits (1125), Expect = e-121, Method: Composition-based stats. Identities = 165/338 (48%), Positives = 229/338 (67%), Gaps = 3/338 (0%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 + + TS + L + K+GFL CG++TGL GF+ + G+W+G DV++C Sbjct: 8 LASVVAASTAMMATSAQAADTTLDKVTKQGFLTCGVSTGLPGFSNPNSKGEWEGIDVEYC 67 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 +AL++A+ D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F + Y+ Sbjct: 68 QALAAAVLGDKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVGVNYY 127 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 DGQGF++ K GISS +L GAS+CVQ+GTTTEL LADYF+ M Y P+VF+ + Sbjct: 128 DGQGFMVKKDLGISSAKELDGASVCVQSGTTTELNLADYFRNSGMSYKPVVFDTAAQTSK 187 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + A RCD T D S LYAL+L PS +LP+IISK PL P + QGD +W+NI WT Sbjct: 188 GFDAGRCDVLTTDQSGLYALRLNLKDPSSAAVLPEIISKEPLGPVVRQGDDQWFNIAKWT 247 Query: 245 HYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMG 304 AM+ AEE GI+ KN +++ K + +P+++R LG+D G+ LG+ DW Y++I+ +G Sbjct: 248 LSAMINAEEYGISSKNADEMLK-SKDPNIKRILGVDGPK--GKGLGIRDDWGYQVIKQVG 304 Query: 305 NYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 NYGE F+R +G S L+I RG NALW+ GG MYAPPIR Sbjct: 305 NYGESFERTVGTGSPLEISRGVNALWNAGGFMYAPPIR 342 >gi|306846158|ref|ZP_07478720.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella sp. BO1] gi|306273409|gb|EFM55270.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella sp. BO1] Length = 339 Score = 437 bits (1125), Expect = e-121, Method: Composition-based stats. Identities = 167/342 (48%), Positives = 227/342 (66%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++L A L +K+RG + CG++ G+ GF+ G W GFD Sbjct: 1 MKKTVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDQGKWTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS +D+LSR T WTL R+ +G+ F Sbjct: 61 IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVG 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+DGQGF++ K G+ S +L GASIC + GTTTE +ADYF AHN+KY P+V + + Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSAD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 I A+ RCD YT D SALYA +L P +++LP++ISK PL PA+ QGD +W+NI Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +A++ AEELGITQK + D+ PDV+RFLG + + G+ LGL W Y I+ Sbjct: 241 VRWTLFALLEAEELGITQKTV-AADLDSRKPDVRRFLGSEG--DNGQQLGLEPKWAYNIV 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGEMF+R +G S LKI RG NALW+KGGLMYAPP++ Sbjct: 298 ASVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339 >gi|115524735|ref|YP_781646.1| cationic amino acid ABC transporter, periplasmic binding protein [Rhodopseudomonas palustris BisA53] gi|115518682|gb|ABJ06666.1| cationic amino acid ABC transporter, periplasmic binding protein [Rhodopseudomonas palustris BisA53] Length = 337 Score = 437 bits (1125), Expect = e-120, Method: Composition-based stats. Identities = 166/318 (52%), Positives = 228/318 (71%), Gaps = 3/318 (0%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 L I+ RG L CG++ GL GF+ G+W G DVD CRA+++A+F+DP+K++++PL+ Sbjct: 23 QTLKTIQDRGVLSCGVSQGLPGFSTPDDKGNWTGLDVDICRAIAAAVFNDPTKVKFVPLS 82 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 AK+RF ALQS +ID+LSRNT WT+ R+ SLG+ F +TY+DGQGF++ K ++S +L+ Sbjct: 83 AKDRFTALQSGEIDVLSRNTTWTISRDTSLGVNFTGVTYYDGQGFLVKKALKVNSALELN 142 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 GASICVQ GTT E +ADYFK +NMKY I F +E AY A RCD +T D+S LYAL Sbjct: 143 GASICVQTGTTNEQNVADYFKGNNMKYEVIAFSTADEALKAYEAGRCDVFTSDVSQLYAL 202 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 +L ++H +LP++ISK PL P + GD +W++IV WT +AM+ AEE G+TQKN+ Sbjct: 203 RLKLAAVADHAVLPEVISKEPLGPLVRHGDDQWFDIVKWTLFAMINAEEFGVTQKNVEDQ 262 Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324 +K PD++R G D N+GE LGLTKDW RI++ GNYGE+F+RN+G+ S+L I R Sbjct: 263 AK-LDKPDLKRMFGTDG--NLGEQLGLTKDWVIRIVKATGNYGEVFERNVGSGSKLGIAR 319 Query: 325 GYNALWSKGGLMYAPPIR 342 G N LW+KGG+ YAPPIR Sbjct: 320 GLNQLWNKGGIQYAPPIR 337 >gi|313109278|ref|ZP_07795246.1| Putative amino-acid ABC transporter binding protein [Pseudomonas aeruginosa 39016] gi|310881748|gb|EFQ40342.1| Putative amino-acid ABC transporter binding protein [Pseudomonas aeruginosa 39016] Length = 341 Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats. Identities = 157/342 (45%), Positives = 237/342 (69%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + +L + L ++ + + L +K++G+++CG++ GL GF+ A G +KG D Sbjct: 4 MKGTWL--LLAAVCLGASATAEAGATLDAVKRKGYVQCGVSDGLPGFSYADAKGRFKGLD 61 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD CRAL++A+F D K+++ PL+A ERF ALQS +D+LSRNT WT R+ +LG+ F Sbjct: 62 VDICRALAAALFGDAEKVRFTPLSATERFSALQSGTVDLLSRNTSWTSSRDTALGIHFTG 121 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TYFDGQGF++++K G+SS +L A++C+Q+GTT EL +ADYF+AH ++Y ++ + E Sbjct: 122 VTYFDGQGFLVNRKLGVSSARELKDATVCIQSGTTNELNVADYFRAHGIRYKAVLDDSYE 181 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A A +CD + D S LYA +L +P ++V+LP++ISK PL PA+ QGD W+NI Sbjct: 182 KSARALEAGQCDVLSSDQSQLYAQRLKLAKPDQYVVLPEVISKEPLGPAVRQGDEAWFNI 241 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT Y ++ AEELG+T N+ + ++D+ NPDV R LG + + G+ L L +DW +++ Sbjct: 242 VRWTLYGLLNAEELGVTSSNVERQARDSRNPDVARLLGSEG--DAGKDLQLPRDWVVQMV 299 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 R +GNYGE+F RN+G+ S LK+PRG NA W+ GGL YAPPIR Sbjct: 300 RQVGNYGEIFARNVGDGSPLKMPRGLNAQWNLGGLHYAPPIR 341 >gi|28898394|ref|NP_797999.1| amino acid ABC transporter periplasmic amino acid-binding protein [Vibrio parahaemolyticus RIMD 2210633] gi|153839329|ref|ZP_01991996.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio parahaemolyticus AQ3810] gi|260366020|ref|ZP_05778498.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio parahaemolyticus K5030] gi|260876625|ref|ZP_05888980.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio parahaemolyticus AN-5034] gi|260898001|ref|ZP_05906497.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio parahaemolyticus Peru-466] gi|260901584|ref|ZP_05909979.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio parahaemolyticus AQ4037] gi|28806611|dbj|BAC59883.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio parahaemolyticus RIMD 2210633] gi|149747161|gb|EDM58149.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio parahaemolyticus AQ3810] gi|308088041|gb|EFO37736.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio parahaemolyticus Peru-466] gi|308094322|gb|EFO44017.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio parahaemolyticus AN-5034] gi|308108540|gb|EFO46080.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio parahaemolyticus AQ4037] gi|308114193|gb|EFO51733.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio parahaemolyticus K5030] gi|328473628|gb|EGF44463.1| amino acid ABC transporter periplasmic amino acid-binding protein [Vibrio parahaemolyticus 10329] Length = 342 Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats. Identities = 166/338 (49%), Positives = 229/338 (67%), Gaps = 3/338 (0%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 + + TS + L + K+GFL CG++TGL GF+ + G+W+G DV++C Sbjct: 8 LASVVAASTAMMATSAQAADTTLDKVTKQGFLTCGVSTGLPGFSNPNSKGEWEGIDVEYC 67 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 +AL++A+ D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F + Y+ Sbjct: 68 QALAAAVLGDKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVGVNYY 127 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 DGQGF++ K GISS +L GAS+CVQ+GTTTEL LADYF+ M Y P+VF+ + Sbjct: 128 DGQGFMVKKDLGISSAKELDGASVCVQSGTTTELNLADYFRNSGMSYKPVVFDTAAQTSK 187 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + A RCD T D S LYAL+L PS +LP+IISK PL P + QGD +W+NI WT Sbjct: 188 GFDAGRCDVLTTDQSGLYALRLNLKDPSSAAVLPEIISKEPLGPVVRQGDDQWFNIAKWT 247 Query: 245 HYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMG 304 AMV AEE GIT KN +++ K + +P+++R LG+D G+ LG+ DW Y++++ +G Sbjct: 248 LAAMVNAEEYGITSKNADEMLK-SQDPNIKRILGVDGPK--GKGLGIRDDWGYQVVKQVG 304 Query: 305 NYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 NYGE F+R +G S L+I RG NALW+ GG MYAPPIR Sbjct: 305 NYGESFERTVGKGSPLEIARGVNALWNAGGFMYAPPIR 342 >gi|258544539|ref|ZP_05704773.1| general amino acid ABC superfamily ATP binding cassette transporter, periplasmic binding protein [Cardiobacterium hominis ATCC 15826] gi|258520221|gb|EEV89080.1| general amino acid ABC superfamily ATP binding cassette transporter, periplasmic binding protein [Cardiobacterium hominis ATCC 15826] Length = 350 Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats. Identities = 161/342 (47%), Positives = 233/342 (68%), Gaps = 6/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L L L T T A L D+KKRG L+CG+ L GF+ +G W G D Sbjct: 15 MKKSLLFTALGLATLVQT---TQADTLDDVKKRGELRCGVTQALAGFSVADDSGRWTGLD 71 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+CRAL+SAIFDDP K+ + P ++KERF LQS +ID+L+R T WT R++ + F Sbjct: 72 VDYCRALASAIFDDPEKVSFRPTSSKERFTVLQSGEIDVLARVTTWTTSRDVDMPFDFIG 131 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K GI SV +LSGASIC GT+TE +ADYFK++ M+Y P++FE+ E Sbjct: 132 VNYYDGQGFMVRKDLGIKSVKELSGASICTNTGTSTETNMADYFKSNGMEYKPVIFEKSE 191 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E+ +AY A RCDAY+ D+S LY + +P +H+ILP++ISK PL P + Q D + ++ Sbjct: 192 EVKSAYDAGRCDAYSSDVSGLYVQRKLLAKPDDHIILPEVISKEPLGPLVRQEDPGFKDL 251 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 +WTH+ MV AEE G+++ N+ ++ K + NP+++R LG++ N + LG+ D+ +II Sbjct: 252 AAWTHFCMVNAEEYGVSKANLEEMKK-SDNPNIRRLLGLEA--NGADKLGVGADFCAKII 308 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +H+GNYGE +DRN+G S L I RG N LW++GG+M+APP+R Sbjct: 309 KHVGNYGEAYDRNVGKDSPLNIERGLNRLWNQGGIMFAPPLR 350 >gi|192291210|ref|YP_001991815.1| extracellular solute-binding protein family 3 [Rhodopseudomonas palustris TIE-1] gi|192284959|gb|ACF01340.1| extracellular solute-binding protein family 3 [Rhodopseudomonas palustris TIE-1] Length = 353 Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats. Identities = 169/356 (47%), Positives = 241/356 (67%), Gaps = 17/356 (4%) Query: 1 MYK-DFFVSILCLIILFFTSFSTNAS-------------ILGDIKKRGFLKCGINTGLVG 46 M + V++ + L L +++ G L CG++ GL G Sbjct: 1 MKRVSILVALAIAVGLSPQVAGAQNPKAGSTAGAEKKKTTLEIVRENGALSCGVSQGLPG 60 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F+ G+W G DVD CRA+++A+FDDPSK++++PL+AK+RF ALQS +ID+LSRNT W Sbjct: 61 FSAPDDKGNWAGLDVDVCRAIAAAVFDDPSKVKFVPLSAKDRFTALQSGEIDVLSRNTTW 120 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 TL R+ SLG++F ++Y+DGQGF+ K ++S +L+GASICVQ GTT E +ADYFK Sbjct: 121 TLSRDTSLGVSFAGVSYYDGQGFMAKKSLKVNSALELNGASICVQTGTTNEQNVADYFKG 180 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 +NMKY I F +E AY + RCD +T D+S LYA +L P++H +LP++ISK PL Sbjct: 181 NNMKYEVIAFANADEAVKAYESGRCDVFTSDVSQLYAQRLKLATPADHAVLPEVISKEPL 240 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIG 286 P + GD +W++IV WT +A+V AEELG+TQKN+++++K + P+++R G D N+G Sbjct: 241 GPLVRHGDDQWFDIVKWTLFALVNAEELGVTQKNVDEMAK-SDKPELKRVFGTDG--NLG 297 Query: 287 EALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 E LGLTKDW RI++ GNYGE F+RN+G+ S+L+I RG N LW+KGG+MYAPPIR Sbjct: 298 EQLGLTKDWVARIVKATGNYGESFERNVGSGSKLEIARGLNKLWNKGGIMYAPPIR 353 >gi|56695433|ref|YP_165781.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Ruegeria pomeroyi DSS-3] gi|56677170|gb|AAV93836.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Ruegeria pomeroyi DSS-3] Length = 380 Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats. Identities = 155/342 (45%), Positives = 222/342 (64%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ L + + A + D+K RG L CG+ TGLVGFA +NG+WKGFD Sbjct: 43 MKKSVFLG--ALTVAGMAAGVAAAGTMDDVKARGKLNCGVTTGLVGFAAPDSNGEWKGFD 100 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ D + ++++P K RF AL S ++D+L+RNT WT R++ L F Sbjct: 101 VALCRAVAAAVLGDGNAVEFVPTTGKTRFTALASGEVDMLARNTTWTFSRDVDLKFEFVG 160 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K G+SS +L GA++C+Q GTTTEL LAD+F+A+N+ Y P+ E Sbjct: 161 VNYYDGQGFMVPKSLGVSSAKELDGATVCIQTGTTTELNLADFFRANNISYEPVPIETNA 220 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT D S L A + T + P +HV+LP+IISK PL P + GD EW ++ Sbjct: 221 EAQQQYLAGACDVYTTDASGLAATRATFENPGDHVLLPEIISKEPLGPLVRHGDHEWGDV 280 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT A+V+AEE+GIT NI+++S T NP++ R LG + + +GE LGL +W R I Sbjct: 281 VRWTLNALVSAEEMGITSANIDEMSAGTNNPEINRILGSEGT--LGEMLGLDAEWAKRAI 338 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + GNYGE+F +N+G + + + RG NA W+ GGL+Y+PP R Sbjct: 339 KVGGNYGEVFAQNIGESTPIGLARGLNAQWTDGGLLYSPPFR 380 >gi|15599053|ref|NP_252547.1| amino acid-binding protein [Pseudomonas aeruginosa PAO1] gi|218889858|ref|YP_002438722.1| putative amino acid-binding protein [Pseudomonas aeruginosa LESB58] gi|254236763|ref|ZP_04930086.1| hypothetical protein PACG_02773 [Pseudomonas aeruginosa C3719] gi|254242550|ref|ZP_04935872.1| hypothetical protein PA2G_03302 [Pseudomonas aeruginosa 2192] gi|9950036|gb|AAG07245.1|AE004803_1 probable amino acid-binding protein [Pseudomonas aeruginosa PAO1] gi|126168694|gb|EAZ54205.1| hypothetical protein PACG_02773 [Pseudomonas aeruginosa C3719] gi|126195928|gb|EAZ59991.1| hypothetical protein PA2G_03302 [Pseudomonas aeruginosa 2192] gi|218770081|emb|CAW25843.1| probable amino acid-binding protein [Pseudomonas aeruginosa LESB58] Length = 341 Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats. Identities = 157/342 (45%), Positives = 237/342 (69%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + +L + L ++ + + L +K++G+++CG++ GL GF+ A G +KG D Sbjct: 4 MKGTWL--LLAAVCLGASATAEAGATLDAVKRKGYVQCGVSDGLPGFSYADAKGRFKGLD 61 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD CRAL++A+F D K+++ PL+A ERF ALQS +D+LSRNT WT R+ +LG+ F Sbjct: 62 VDICRALAAALFGDAEKVRFTPLSATERFSALQSGTVDLLSRNTSWTSSRDTALGIHFTG 121 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TYFDGQGF++++K G+SS +L A++C+Q+GTT EL +ADYF+AH ++Y ++ + E Sbjct: 122 VTYFDGQGFLVNRKLGVSSARELKDATVCIQSGTTNELNVADYFRAHGIRYKAVLDDSYE 181 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A A +CD + D S LYA +L +P ++V+LP++ISK PL PA+ QGD W+NI Sbjct: 182 KSARALEAGQCDVLSSDQSQLYAQRLKLAKPEQYVVLPEVISKEPLGPAVRQGDEAWFNI 241 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT Y ++ AEELG+T N+ + ++D+ NPDV R LG + + G+ L L +DW +++ Sbjct: 242 VRWTLYGLLNAEELGVTSSNVERQARDSRNPDVARLLGSEG--DAGKDLQLPRDWVVQMV 299 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 R +GNYGE+F RN+G+ S LK+PRG NA W+ GGL YAPPIR Sbjct: 300 RQVGNYGEIFARNVGDGSPLKMPRGLNAQWNLGGLHYAPPIR 341 >gi|23500674|ref|NP_700114.1| amino acid ABC transporter periplasmic amino acid-binding protein [Brucella suis 1330] gi|163845062|ref|YP_001622717.1| hypothetical protein BSUIS_B0940 [Brucella suis ATCC 23445] gi|23464321|gb|AAN34119.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella suis 1330] gi|163675785|gb|ABY39895.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] Length = 339 Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats. Identities = 166/342 (48%), Positives = 227/342 (66%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++L A L +K+RG + CG++ G+ GF+ G W GFD Sbjct: 1 MKKAVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDQGKWTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS +D+LSR T WTL R+ +G+ F Sbjct: 61 IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVG 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+DGQGF++ K G+ S +L GASIC + GTTTE +ADYF AHN+KY P+V + + Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSAD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 I A+ RCD YT D SALYA +L P +++LP++ISK PL PA+ QGD +W+NI Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +A++ AEELGITQK + D+ PD++RFLG + + G+ LGL W Y I+ Sbjct: 241 VRWTLFALLEAEELGITQKTV-AADLDSRKPDIRRFLGSEG--DNGQQLGLEPKWAYNIV 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGEMF+R +G S LKI RG NALW+KGGLMYAPP++ Sbjct: 298 ASVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339 >gi|163760315|ref|ZP_02167398.1| ABC transporter, amino acid binding protein [Hoeflea phototrophica DFL-43] gi|162282714|gb|EDQ33002.1| ABC transporter, amino acid binding protein [Hoeflea phototrophica DFL-43] Length = 340 Score = 437 bits (1123), Expect = e-120, Method: Composition-based stats. Identities = 169/317 (53%), Positives = 239/317 (75%), Gaps = 3/317 (0%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L D+K +GF++CG++TGL GF+ G+W G DVD CR +++A+F D S +++ PL+A Sbjct: 27 TLDDVKAKGFVQCGVSTGLAGFSAPNDAGEWSGIDVDLCRGVAAAVFGDASAVKFSPLSA 86 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 KERF ALQS +ID+LSRNT WT+ R+ LGL F + Y+DGQGF++ K G++S QLSG Sbjct: 87 KERFTALQSGEIDVLSRNTTWTMSRDTQLGLNFAGVNYYDGQGFMVRKSLGVTSALQLSG 146 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 AS+CVQ GTTTEL L DYFKA++M Y+P+VFE++EE++AAY A+RCD YT D S LY+++ Sbjct: 147 ASVCVQTGTTTELNLTDYFKANDMTYNPVVFEKLEEVNAAYDANRCDVYTTDQSGLYSIR 206 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 L P EH++LP++ISK PL P + QGD +W+NIV W H AM+ AEE+GIT N+++++ Sbjct: 207 LGLSAPDEHMVLPEVISKEPLGPVVRQGDDQWFNIVKWVHNAMLNAEEMGITSANVDEMA 266 Query: 266 KDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRG 325 + +P+V R LG + + GE +G++ DW Y++++ +GNYGE+F+RN+G + L I RG Sbjct: 267 A-SADPNVMRLLGKEGT--FGEGIGVSNDWAYQVVKQVGNYGEVFERNVGASTPLAIDRG 323 Query: 326 YNALWSKGGLMYAPPIR 342 NALWSKGGL YAPPIR Sbjct: 324 VNALWSKGGLQYAPPIR 340 >gi|107103377|ref|ZP_01367295.1| hypothetical protein PaerPA_01004447 [Pseudomonas aeruginosa PACS2] Length = 338 Score = 437 bits (1123), Expect = e-120, Method: Composition-based stats. Identities = 157/342 (45%), Positives = 237/342 (69%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + +L + L ++ + + L +K++G+++CG++ GL GF+ A G +KG D Sbjct: 1 MKGTWL--LLAAVCLGASATAEAGATLDAVKRKGYVQCGVSDGLPGFSYADAKGRFKGLD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD CRAL++A+F D K+++ PL+A ERF ALQS +D+LSRNT WT R+ +LG+ F Sbjct: 59 VDICRALAAALFGDAEKVRFTPLSATERFSALQSGTVDLLSRNTSWTSSRDTALGIHFTG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TYFDGQGF++++K G+SS +L A++C+Q+GTT EL +ADYF+AH ++Y ++ + E Sbjct: 119 VTYFDGQGFLVNRKLGVSSARELKDATVCIQSGTTNELNVADYFRAHGIRYKAVLDDSYE 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A A +CD + D S LYA +L +P ++V+LP++ISK PL PA+ QGD W+NI Sbjct: 179 KSARALEAGQCDVLSSDQSQLYAQRLKLAKPEQYVVLPEVISKEPLGPAVRQGDEAWFNI 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT Y ++ AEELG+T N+ + ++D+ NPDV R LG + + G+ L L +DW +++ Sbjct: 239 VRWTLYGLLNAEELGVTSSNVERQARDSRNPDVARLLGSEG--DAGKDLQLPRDWVVQMV 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 R +GNYGE+F RN+G+ S LK+PRG NA W+ GGL YAPPIR Sbjct: 297 RQVGNYGEIFARNVGDGSPLKMPRGLNAQWNLGGLHYAPPIR 338 >gi|296272121|ref|YP_003654752.1| cationic amino acid ABC transporter periplasmic binding protein [Arcobacter nitrofigilis DSM 7299] gi|296096296|gb|ADG92246.1| cationic amino acid ABC transporter, periplasmic binding protein [Arcobacter nitrofigilis DSM 7299] Length = 338 Score = 437 bits (1123), Expect = e-120, Method: Composition-based stats. Identities = 173/341 (50%), Positives = 228/341 (66%), Gaps = 3/341 (0%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K L + L S ++A L K G L CG+NTGL GFA ++G WKG DV Sbjct: 1 MKLLKTLSLSIAALAIASTVSSADTLDTTIKNGKLSCGLNTGLPGFAAPDSDGVWKGIDV 60 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D CRA+++A+ D +K++Y LNAKERF ALQS +ID+L+RNT WT R+ SLGL F + Sbjct: 61 DVCRAVAAAVLGDATKVKYAHLNAKERFTALQSGEIDVLARNTTWTATRDTSLGLNFTGV 120 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y+DGQGF++ KK G+ S +L GA+ C+QAGTTTEL L DYFK+HNMKY PI ++ + Sbjct: 121 NYYDGQGFLVSKKLGVKSAKELDGATFCIQAGTTTELNLTDYFKSHNMKYTPITYDTSAQ 180 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + RCDA T D S LYAL+ PS ++LP+IISK PL P + QGD +W+NIV Sbjct: 181 TIQGFEEGRCDALTSDSSQLYALRTQLKNPSSAIVLPEIISKEPLGPVVRQGDDKWFNIV 240 Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301 WT AM+ AE+LG+ KN++++ K +TNP++QR LG+ + +IG+ LGL W Y II+ Sbjct: 241 KWTEIAMLNAEDLGVNSKNVDEMLK-STNPNIQRLLGV--TGDIGKNLGLDPKWAYNIIK 297 Query: 302 HMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGE F+RN+G S LKI RG NALW GGL Y PIR Sbjct: 298 QVGNYGESFERNVGQGSPLKIERGLNALWKNGGLQYGAPIR 338 >gi|251791415|ref|YP_003006136.1| extracellular solute-binding protein family 3 [Dickeya zeae Ech1591] gi|247540036|gb|ACT08657.1| extracellular solute-binding protein family 3 [Dickeya zeae Ech1591] Length = 343 Score = 437 bits (1123), Expect = e-120, Method: Composition-based stats. Identities = 165/343 (48%), Positives = 235/343 (68%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K +++ LF +A + L I+K+GF++CGI+ GL GF+ ANG + G Sbjct: 3 MKKVIMSTLVASASLFAFINQAHAGATLDAIQKKGFVQCGISDGLPGFSYADANGKYSGI 62 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++AIF D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +GL F Sbjct: 63 DVDVCRGVAAAIFGDANKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDGGMGLLFT 122 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFK HNMKY P+ F+R Sbjct: 123 GVTYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKTHNMKYTPVTFDRS 182 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ +P++ V+LP++ISK PL P + +GD +W+ Sbjct: 183 DESAKALDSGRCDTLASDQSQLYALRIKLGKPADFVVLPEVISKEPLGPVVRRGDEDWFA 242 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GIT +N++Q++ T PD+ LG + N G+ L L DW ++I Sbjct: 243 IVRWTLFAMLNAEEMGITSQNVDQMAAKPTTPDMAHLLGKEG--NFGKDLKLPADWAFKI 300 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++ +GNYGE+F+RN+G SELKI RG N LW+KGG+ YAP +R Sbjct: 301 VKQVGNYGEVFERNVGQGSELKIKRGLNELWNKGGIQYAPTVR 343 >gi|256111139|ref|ZP_05452175.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella melitensis bv. 3 str. Ether] gi|265992652|ref|ZP_06105209.1| extracellular solute-binding protein [Brucella melitensis bv. 3 str. Ether] gi|262763522|gb|EEZ09554.1| extracellular solute-binding protein [Brucella melitensis bv. 3 str. Ether] Length = 339 Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats. Identities = 167/342 (48%), Positives = 227/342 (66%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++L A L +K+RG + CGI+ G+ GF+ G W GFD Sbjct: 1 MKKTVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGISQGVAGFSSPDDQGKWTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS +D+LSR T WTL R+ +G+ F Sbjct: 61 IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVG 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+DGQGF++ K G+ S +L GASIC + GTTTE +ADYF AHN+KY P+V + + Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSAD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 I A+ RCD YT D SALYA +L P +++LP++ISK PL PA+ QGD +W+NI Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +A++ AEELGITQK + D+ PD++RFLG + + G+ LGL W Y I+ Sbjct: 241 VRWTLFALLEAEELGITQKTV-AADLDSRKPDIRRFLGSEG--DNGQQLGLEPKWAYNIV 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGEMF+R +G S LKI RG NALW+KGGLMYAPP++ Sbjct: 298 ASVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339 >gi|161621000|ref|YP_001594886.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella canis ATCC 23365] gi|260567799|ref|ZP_05838268.1| solute-binding protein/glutamate receptor [Brucella suis bv. 4 str. 40] gi|161337811|gb|ABX64115.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella canis ATCC 23365] gi|260154464|gb|EEW89545.1| solute-binding protein/glutamate receptor [Brucella suis bv. 4 str. 40] Length = 339 Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats. Identities = 166/342 (48%), Positives = 227/342 (66%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++L A L +K+RG + CG++ G+ GF+ G W GFD Sbjct: 1 MKKAVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDRGKWTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS +D+LSR T WTL R+ +G+ F Sbjct: 61 IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVG 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+DGQGF++ K G+ S +L GASIC + GTTTE +ADYF AHN+KY P+V + + Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSAD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 I A+ RCD YT D SALYA +L P +++LP++ISK PL PA+ QGD +W+NI Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +A++ AEELGITQK + D+ PD++RFLG + + G+ LGL W Y I+ Sbjct: 241 VRWTLFALLEAEELGITQKTV-AADLDSRKPDIRRFLGSEG--DNGQQLGLEPKWAYNIV 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGEMF+R +G S LKI RG NALW+KGGLMYAPP++ Sbjct: 298 ASVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339 >gi|116051889|ref|YP_789268.1| putative amino acid-binding protein [Pseudomonas aeruginosa UCBPP-PA14] gi|115587110|gb|ABJ13125.1| Putative amino-acid ABC transporter binding protei [Pseudomonas aeruginosa UCBPP-PA14] Length = 341 Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats. Identities = 157/342 (45%), Positives = 236/342 (69%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + +L + L ++ + + L +K++G+++CG++ GL GF+ A G +KG D Sbjct: 4 MKGTWL--LLAAVCLGASATAEAGATLDAVKRKGYVQCGVSDGLPGFSYADAKGRFKGLD 61 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD CRAL++A+F D K+++ PL A ERF ALQS +D+LSRNT WT R+ +LG+ F Sbjct: 62 VDICRALAAALFGDAEKVRFTPLPATERFSALQSGTVDLLSRNTSWTSSRDTALGIHFTG 121 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TYFDGQGF++++K G+SS +L A++C+Q+GTT EL +ADYF+AH ++Y ++ + E Sbjct: 122 VTYFDGQGFLVNRKLGVSSARELKDATVCIQSGTTNELNVADYFRAHGIRYKAVLDDSYE 181 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A A +CD + D S LYA +L +P ++V+LP++ISK PL PA+ QGD W+NI Sbjct: 182 KSARALEAGQCDVLSSDQSQLYAQRLKLAKPDQYVVLPEVISKEPLGPAVRQGDEAWFNI 241 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT Y ++ AEELG+T N+ + ++D+ NPDV R LG + + G+ L L +DW +++ Sbjct: 242 VRWTLYGLLNAEELGVTSSNVERQARDSRNPDVARLLGSEG--DAGKDLQLPRDWVVQMV 299 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 R +GNYGE+F RN+G+ S LK+PRG NA W+ GGL YAPPIR Sbjct: 300 RQVGNYGEIFARNVGDGSPLKMPRGLNAQWNLGGLHYAPPIR 341 >gi|50119205|ref|YP_048372.1| general L-amino ABC transporter binding protein [Pectobacterium atrosepticum SCRI1043] gi|227114001|ref|ZP_03827657.1| general L-amino ABC transporter binding protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] gi|253686635|ref|YP_003015825.1| extracellular solute-binding protein family 3 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|49609731|emb|CAG73165.1| general L-amino ABC transporter binding protein [Pectobacterium atrosepticum SCRI1043] gi|251753213|gb|ACT11289.1| extracellular solute-binding protein family 3 [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 341 Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats. Identities = 162/343 (47%), Positives = 236/343 (68%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M + +++ LF +A + L I+K+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKRIVISTLVAGASLFAAINQAHAGATLDAIQKKGFVQCGISDGLPGFSYADASGKYSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR L++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +G+ F Sbjct: 61 DVDVCRGLAAAVFGDANKVKYTPLTAKERFTALQSGEVDVLSRNTTWTSSRDGGMGMLFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G++S +L GA++C+QAGT TEL +ADYFK H M+Y P+ F+R Sbjct: 121 GVTYYDGIGFLTHNKAGLTSAKELDGATVCIQAGTDTELNVADYFKTHKMQYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ +P+E ++LP++ISK PL P + +GD EW++ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSKPAEFIVLPEVISKEPLGPVVRRGDEEWFS 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+G+T KN++Q++ T PD+ LG + S G+ L L DW ++I Sbjct: 241 IVRWTLFAMLNAEEMGVTSKNVDQLAAKPTTPDMSHLLGHEGS--YGKDLKLPNDWAFKI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNYGE+F+RN+G SELKI RG N LW+KGG+ YAP +R Sbjct: 299 IKQVGNYGEIFERNVGMGSELKIKRGLNELWNKGGIQYAPAVR 341 >gi|254690732|ref|ZP_05153986.1| Solute-binding protein/glutamate receptor [Brucella abortus bv. 6 str. 870] gi|254695963|ref|ZP_05157791.1| Solute-binding protein/glutamate receptor [Brucella abortus bv. 3 str. Tulya] gi|256255914|ref|ZP_05461450.1| Solute-binding protein/glutamate receptor [Brucella abortus bv. 9 str. C68] gi|260756304|ref|ZP_05868652.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 6 str. 870] gi|260882128|ref|ZP_05893742.1| extracellular solute-binding protein [Brucella abortus bv. 9 str. C68] gi|261216393|ref|ZP_05930674.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 3 str. Tulya] gi|297249275|ref|ZP_06932976.1| general L-amino acid transport system substrate-binding protein [Brucella abortus bv. 5 str. B3196] gi|260676412|gb|EEX63233.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 6 str. 870] gi|260871656|gb|EEX78725.1| extracellular solute-binding protein [Brucella abortus bv. 9 str. C68] gi|260918000|gb|EEX84861.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 3 str. Tulya] gi|297173144|gb|EFH32508.1| general L-amino acid transport system substrate-binding protein [Brucella abortus bv. 5 str. B3196] Length = 339 Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats. Identities = 165/342 (48%), Positives = 226/342 (66%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++L A L +K+RG + CG++ G+ GF+ G W GFD Sbjct: 1 MKKTVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDQGKWTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS +D+LSR T WTL R+ +G+ F Sbjct: 61 IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVG 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+DGQGF++ K G+ S +L GASIC + GTTTE +ADY AHN+KY P+V + + Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYCGAHNIKYEPVVIDSAD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 I A+ RCD YT D SALYA +L P +++LP++ISK PL PA+ QGD +W+NI Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +A++ AEELGITQK + D+ PD++RFLG + + G+ LGL W Y I+ Sbjct: 241 VRWTLFALLEAEELGITQKTV-AADLDSRKPDIRRFLGSEG--DNGQQLGLEPKWAYNIV 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGEMF+R +G S LKI RG NALW+KGGLMYAPP++ Sbjct: 298 ASVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339 >gi|254700150|ref|ZP_05161978.1| hypothetical protein Bsuib55_04721 [Brucella suis bv. 5 str. 513] gi|261750642|ref|ZP_05994351.1| extracellular solute-binding protein family 3 [Brucella suis bv. 5 str. 513] gi|261740395|gb|EEY28321.1| extracellular solute-binding protein family 3 [Brucella suis bv. 5 str. 513] Length = 339 Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats. Identities = 166/342 (48%), Positives = 227/342 (66%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++L A L +K+RG + CG++ G+ GF+ G W GFD Sbjct: 1 MKKAVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDQGKWTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS +D+LSR T WTL R+ +G+ F Sbjct: 61 IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGAVDLLSRQTTWTLSRDAGMGIHFVG 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+DGQGF++ K G+ S +L GASIC + GTTTE +ADYF AHN+KY P+V + + Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSAD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 I A+ RCD YT D SALYA +L P +++LP++ISK PL PA+ QGD +W+NI Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +A++ AEELGITQK + D+ PD++RFLG + + G+ LGL W Y I+ Sbjct: 241 VRWTLFALLEAEELGITQKTV-AADLDSRKPDIRRFLGSEG--DNGQQLGLEPKWAYNIV 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGEMF+R +G S LKI RG NALW+KGGLMYAPP++ Sbjct: 298 ASVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339 >gi|255264624|ref|ZP_05343966.1| glutamate/glutamine/aspartate/asparagine-binding protein bztAprecursor [Thalassiobium sp. R2A62] gi|255106959|gb|EET49633.1| glutamate/glutamine/aspartate/asparagine-binding protein bztAprecursor [Thalassiobium sp. R2A62] Length = 338 Score = 435 bits (1120), Expect = e-120, Method: Composition-based stats. Identities = 155/342 (45%), Positives = 221/342 (64%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ L + L + + A+ L D+K RG L CG+ TGLVGFA A+G+W+GFD Sbjct: 1 MKKSVFLGALTVAGL--AAGMSAAATLDDVKARGTLNCGVTTGLVGFAAPDASGEWEGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ D + ++++P K RF AL S +ID+L+RNT WT R++ L F Sbjct: 59 VGVCRAVAAAVLGDSNAVEFVPTTGKTRFTALASGEIDMLARNTTWTFSRDVDLKFEFVG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF+ K+ G+SS L GA++C+Q GTTTEL LAD+F+A+N+ Y P+ E Sbjct: 119 VNYYDGQGFMAPKELGVSSAKDLDGATVCIQTGTTTELNLADFFRANNISYEPVPIETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD +T D S L A + T + P +HV+LP+I+SK PL P + GD EW +I Sbjct: 179 EAQQQYLAGACDVFTTDASGLAATRATFENPGDHVLLPEIVSKEPLGPLVRHGDNEWGDI 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT A++TAEELG+T NI ++S T NP+V R LG + +G LGL W I Sbjct: 239 VRWTLNALITAEELGVTSANIGELSAGTNNPEVNRLLGTEGE--LGGMLGLDAAWAKNAI 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F++N+G + + + RG NA+W++GGL+Y+PP R Sbjct: 297 MAGGNYGEIFEKNIGENTPIGLARGLNAMWTEGGLIYSPPFR 338 >gi|256029203|ref|ZP_05442817.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella pinnipedialis M292/94/1] gi|265986189|ref|ZP_06098746.1| extracellular solute-binding protein family 3 [Brucella pinnipedialis M292/94/1] gi|264658386|gb|EEZ28647.1| extracellular solute-binding protein family 3 [Brucella pinnipedialis M292/94/1] Length = 339 Score = 435 bits (1120), Expect = e-120, Method: Composition-based stats. Identities = 165/342 (48%), Positives = 226/342 (66%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++L A L +K+RG + CG++ G+ GF+ G W GFD Sbjct: 1 MKKTVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDQGKWTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS +D+LSR T WTL R+ +G+ F Sbjct: 61 IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVG 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+DGQGF++ K G+ S +L GASIC + GTTTE +ADYF AHN+KY P+V + + Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSAD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 I A+ RCD YT D SALY +L P +++LP++ISK PL PA+ QGD +W+NI Sbjct: 181 GILKAFETGRCDVYTTDASALYVQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +A++ AEELGITQK + D+ PD++RFLG + + G+ LGL W Y I+ Sbjct: 241 VRWTLFALLEAEELGITQKTV-AADLDSRKPDIRRFLGSEG--DNGQQLGLEPKWAYNIV 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGEMF+R +G S LKI RG NALW+KGGLMYAPP++ Sbjct: 298 ASVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339 >gi|254720190|ref|ZP_05182001.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella sp. 83/13] gi|265985199|ref|ZP_06097934.1| extracellular solute-binding protein family 3 [Brucella sp. 83/13] gi|306838669|ref|ZP_07471505.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella sp. NF 2653] gi|264663791|gb|EEZ34052.1| extracellular solute-binding protein family 3 [Brucella sp. 83/13] gi|306406312|gb|EFM62555.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella sp. NF 2653] Length = 339 Score = 435 bits (1120), Expect = e-120, Method: Composition-based stats. Identities = 168/342 (49%), Positives = 227/342 (66%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++L A L +K+RG + CG++ G+ GF+ G W GFD Sbjct: 1 MKKTVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDQGKWTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS +D+LSR T WTL R+ LG+ F Sbjct: 61 IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGLGIHFVG 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+DGQGF++ K G+ S +L GASIC + GTTTE +ADYF AHN+KY P+V + + Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSAD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 I A+ RCD YT D SALYA +L P +++LP++ISK PL PA+ QGD +W+NI Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPEAYMVLPEVISKEPLGPAVRQGDDKWFNI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +A++ AEELGITQK + D+ PDV+RFLG + + G+ LGL W Y I+ Sbjct: 241 VRWTLFALLEAEELGITQKTV-AADLDSRKPDVRRFLGSEG--DNGQQLGLEPKWAYNIV 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGEMF+R +G S LKI RG NALW+KGGLMYAPP++ Sbjct: 298 ALVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339 >gi|118589034|ref|ZP_01546441.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Stappia aggregata IAM 12614] gi|118438363|gb|EAV44997.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Stappia aggregata IAM 12614] Length = 326 Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats. Identities = 165/316 (52%), Positives = 230/316 (72%), Gaps = 3/316 (0%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L D+K +GF++CG++ GL GF+ A G+W G DVD+CRA+++A+F D S ++Y PL+AK Sbjct: 14 LEDVKAKGFIQCGVSQGLPGFSNPDAQGNWTGIDVDYCRAMAAAVFGDASAVKYTPLSAK 73 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 ERF ALQS ++D+LSRNT WT+ R+ LGL F + Y+DGQGF++ K G++S +LSGA Sbjct: 74 ERFTALQSGEVDVLSRNTTWTMSRDTQLGLNFAGVNYYDGQGFMVRKDLGVTSALELSGA 133 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 S+C GTTTEL +ADYF+A+NM Y + FE+ +E+ AAY A RCD YT D S LYA +L Sbjct: 134 SVCTNTGTTTELNVADYFRANNMPYEIVAFEKADEVVAAYDAGRCDVYTTDASGLYAQRL 193 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 P +H++LP+IISK PL P + QGD EW+NI WT AM+ AEELG+T +N++++ K Sbjct: 194 KLTNPGDHMVLPEIISKEPLGPVVRQGDDEWFNIAKWTLNAMLNAEELGVTSENVDEM-K 252 Query: 267 DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGY 326 + NP ++R LG++ + GEA+GL DW Y II+++GNY E F+ N+G + L I RG Sbjct: 253 SSDNPSIKRLLGVEGA--FGEAIGLPNDWAYAIIKNVGNYEESFNANVGPDTPLGISRGV 310 Query: 327 NALWSKGGLMYAPPIR 342 NALW+ GG MYAPP+R Sbjct: 311 NALWNDGGFMYAPPVR 326 >gi|209695504|ref|YP_002263433.1| general L-amino acid-binding periplasmic protein precursor [Aliivibrio salmonicida LFI1238] gi|208009456|emb|CAQ79742.1| general L-amino acid-binding periplasmic protein precursor [Aliivibrio salmonicida LFI1238] Length = 342 Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats. Identities = 163/339 (48%), Positives = 230/339 (67%), Gaps = 3/339 (0%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 F +I L T + L + K G+L+CG++TGL GF+ + G+W+G DV++ Sbjct: 7 TLFAAIATSAALLSTQATAADGTLEKVVKNGYLQCGVSTGLPGFSNPNSKGEWEGIDVEY 66 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 C+A+++A+ D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ SLGL F + Y Sbjct: 67 CQAVAAAVLGDKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTSLGLNFVGVNY 126 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 +DGQGF++ K+ G++S +L GAS+CVQ+GTTTEL LADYF+ ++M+Y P+VF+ + Sbjct: 127 YDGQGFMVKKELGLTSAKELDGASVCVQSGTTTELNLADYFRNNSMEYKPVVFDTAAQTS 186 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 + A RCD T D S LYAL+L P ILP+IISK PL P + QGD +W+NI W Sbjct: 187 KGFDAGRCDVLTTDQSGLYALRLNLKDPKTAQILPEIISKEPLGPVVRQGDDKWFNINKW 246 Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHM 303 AM+ AEE GIT N +Q+ K + +P+++R LG+D G+ LG+ DW Y++I+ + Sbjct: 247 VLSAMINAEEYGITSANADQMLK-SKDPNIKRILGVDGPK--GKGLGIRDDWGYQVIKQV 303 Query: 304 GNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE F+R +G S L+I RG NALW+ GG MYA PIR Sbjct: 304 GNYGESFERTVGTGSPLQISRGVNALWNAGGFMYAAPIR 342 >gi|89092424|ref|ZP_01165378.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Oceanospirillum sp. MED92] gi|89083512|gb|EAR62730.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Oceanospirillum sp. MED92] Length = 354 Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats. Identities = 168/342 (49%), Positives = 233/342 (68%), Gaps = 5/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + S++ + SF A L D++KRG + CG++TGL GF++ NG W G D Sbjct: 18 MKR--LTSVIATGLALGLSFGAQAGTLEDVQKRGSVSCGVSTGLAGFSQKDENGTWSGLD 75 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD CR++++A+ D SK+QY PL AKERF ALQS +IDILSRNT WT R+ SLGL F Sbjct: 76 VDVCRSVAAAVLGDASKVQYKPLTAKERFTALQSGEIDILSRNTTWTHTRDTSLGLNFAG 135 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K G+SS L GA++C+QAGTTTEL LADYF+A+ + Y+ I F+ + Sbjct: 136 VNYYDGQGFMVSKDLGVSSALDLDGAAVCIQAGTTTELNLADYFRANGITYNAITFDTSD 195 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A + + RCD T D S LYAL++ PS ++LP++ISK PL P + QGD +W+NI Sbjct: 196 QTRAGFESGRCDVLTSDQSQLYALRIGLKDPSSAMVLPEVISKEPLGPVVRQGDDQWFNI 255 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V W+ YAMV AE +GI N +Q +K NP QR +G+D ++ GE +G++ DW Y I+ Sbjct: 256 VKWSVYAMVEAEFMGINSANADQ-AKSQGNPGQQRLMGVD--TDSGEKMGISNDWAYNIV 312 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE F+RN+G S LKI RG NA W+KGG+MY+ P+R Sbjct: 313 KQVGNYGESFERNVGQGSPLKISRGLNAQWNKGGIMYSSPVR 354 >gi|330999032|ref|ZP_08322757.1| general L-amino acid-binding periplasmic protein AapJ [Parasutterella excrementihominis YIT 11859] gi|329575774|gb|EGG57300.1| general L-amino acid-binding periplasmic protein AapJ [Parasutterella excrementihominis YIT 11859] Length = 340 Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats. Identities = 149/342 (43%), Positives = 227/342 (66%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + L + L + + +L +K + CG+NT GF+ + G+W G D Sbjct: 1 MNQTILAGALSAVSLSLAAPAFAGPVLDKVKANDVVVCGVNTAAPGFSNADSKGNWTGLD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+CRAL++A+ D +K++++PLN+ +RF ALQ+ ++D+L+RNT W L R+ SLG F Sbjct: 61 VDYCRALAAAVLGDANKVKFVPLNSPQRFSALQAGEVDVLARNTTWNLTRDASLGAVFVG 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+DGQGF++ KK + S QL+GA+ICVQ+GT++E ++ADYFK+H MKY ++F+ E Sbjct: 121 TNYYDGQGFLVPKKLNVKSAKQLNGATICVQSGTSSEPSVADYFKSHGMKYKAVLFDTTE 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A+ + RC YT D+S L + P ++VILP++ISK PL P++ +GD EW+ I Sbjct: 181 ATQGAFLSGRCQVYTTDMSDLAGARTKAANPDDYVILPEVISKEPLGPSVRRGDNEWFQI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 W A + AEE GITQ N +++ K +T+P+V+R LG ++G+ LGL KDW+YRI+ Sbjct: 241 ARWVLNAFIEAEEKGITQANADELRKTSTDPNVKRLLG--SGEDMGKLLGLDKDWSYRIV 298 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE F+RNLG ++ L +PRG N W+ GG++YAPP+R Sbjct: 299 KQVGNYGESFERNLGPKTPLALPRGINNQWTNGGILYAPPVR 340 >gi|254712708|ref|ZP_05174519.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella ceti M644/93/1] gi|254715778|ref|ZP_05177589.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella ceti M13/05/1] gi|261217539|ref|ZP_05931820.1| extracellular solute-binding protein family 3 [Brucella ceti M13/05/1] gi|261320414|ref|ZP_05959611.1| extracellular solute-binding protein family 3 [Brucella ceti M644/93/1] gi|260922628|gb|EEX89196.1| extracellular solute-binding protein family 3 [Brucella ceti M13/05/1] gi|261293104|gb|EEX96600.1| extracellular solute-binding protein family 3 [Brucella ceti M644/93/1] Length = 339 Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats. Identities = 165/342 (48%), Positives = 226/342 (66%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++L A L +K+RG + CG++ G+ GF+ G W GFD Sbjct: 1 MKKTVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDQGKWTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS +D+LSR T WTL R+ +G+ F Sbjct: 61 IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVG 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+DGQGF++ K G+ S +L GASIC + GTTTE +ADYF AHN+KY P+V + + Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSAD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 I A+ RCD YT D SA YA +L P +++LP++ISK PL PA+ QGD +W+NI Sbjct: 181 GILKAFETGRCDVYTTDASAFYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +A++ AEELGITQK + D+ PD++RFLG + + G+ LGL W Y I+ Sbjct: 241 VRWTLFALLEAEELGITQKTV-AADLDSRKPDIRRFLGSEG--DNGQQLGLEPKWAYNIV 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGEMF+R +G S LKI RG NALW+KGGLMYAPP++ Sbjct: 298 ASVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339 >gi|62317227|ref|YP_223080.1| amino acid ABC transporter periplasmic amino acid-binding protein [Brucella abortus bv. 1 str. 9-941] gi|83269208|ref|YP_418499.1| glutamate-binding protein [Brucella melitensis biovar Abortus 2308] gi|189022489|ref|YP_001932230.1| Solute-binding protein/glutamate receptor [Brucella abortus S19] gi|237816787|ref|ZP_04595779.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella abortus str. 2308 A] gi|254698509|ref|ZP_05160337.1| Solute-binding protein/glutamate receptor [Brucella abortus bv. 2 str. 86/8/59] gi|254731957|ref|ZP_05190535.1| Solute-binding protein/glutamate receptor [Brucella abortus bv. 4 str. 292] gi|260544464|ref|ZP_05820285.1| solute-binding protein/glutamate receptor [Brucella abortus NCTC 8038] gi|260759731|ref|ZP_05872079.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 4 str. 292] gi|260762971|ref|ZP_05875303.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 2 str. 86/8/59] gi|62197420|gb|AAX75719.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella abortus bv. 1 str. 9-941] gi|82939482|emb|CAJ12452.1| Solute-binding protein/glutamate receptor:Bacterial extracellular solute-binding protein, family 3 [Brucella melitensis biovar Abortus 2308] gi|189021063|gb|ACD73784.1| Solute-binding protein/glutamate receptor [Brucella abortus S19] gi|237787600|gb|EEP61816.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella abortus str. 2308 A] gi|260097735|gb|EEW81609.1| solute-binding protein/glutamate receptor [Brucella abortus NCTC 8038] gi|260670049|gb|EEX56989.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 4 str. 292] gi|260673392|gb|EEX60213.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 2 str. 86/8/59] Length = 339 Score = 435 bits (1118), Expect = e-120, Method: Composition-based stats. Identities = 164/342 (47%), Positives = 225/342 (65%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++L A L +K+RG + CG++ G+ GF+ G W GFD Sbjct: 1 MKKTVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDQGKWTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS +D+LS T WTL R+ +G+ F Sbjct: 61 IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSCQTTWTLSRDAGMGIHFVG 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+DGQGF++ K G+ S +L GASIC + GTTTE +ADY AHN+KY P+V + + Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYCGAHNIKYEPVVIDSAD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 I A+ RCD YT D SALYA +L P +++LP++ISK PL PA+ QGD +W+NI Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +A++ AEELGITQK + D+ PD++RFLG + + G+ LGL W Y I+ Sbjct: 241 VRWTLFALLEAEELGITQKTV-AADLDSRKPDIRRFLGSEG--DNGQQLGLEPKWAYNIV 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGEMF+R +G S LKI RG NALW+KGGLMYAPP++ Sbjct: 298 ASVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339 >gi|242241099|ref|YP_002989280.1| extracellular solute-binding protein family 3 [Dickeya dadantii Ech703] gi|242133156|gb|ACS87458.1| extracellular solute-binding protein family 3 [Dickeya dadantii Ech703] Length = 343 Score = 435 bits (1118), Expect = e-120, Method: Composition-based stats. Identities = 165/343 (48%), Positives = 234/343 (68%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K +++ LF + +A + L I+K+GF++CGI+ GL GF+ A G + G Sbjct: 3 MKKVIMSTLVAGASLFALANQAHAGATLDAIQKKGFVQCGISDGLPGFSYADAGGKYTGI 62 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D +K++Y PL AKERF ALQS ++DILSRNT WT R+ +GL F Sbjct: 63 DVDVCRGVAAAVFGDANKVKYTPLTAKERFTALQSGEVDILSRNTTWTSSRDGGMGLLFT 122 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFK +NMKY P+ F+R Sbjct: 123 GVTYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKTNNMKYTPVTFDRS 182 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ +P+E V+LP++ISK PL P + +GD +W+ Sbjct: 183 DESAKALDSGRCDTLASDQSQLYALRIKLGKPTEFVVLPEVISKEPLGPVVRRGDEDWFA 242 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GIT KN++ ++ T PD+ LG + N G+ L L DW Y+I Sbjct: 243 IVRWTLFAMLNAEEMGITSKNVDALAAKPTTPDMAHLLGKEG--NFGKDLKLPNDWAYKI 300 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++ +GNYGE+F+RN+G SELKI RG N LW+KGG+ YAP +R Sbjct: 301 VKQVGNYGEVFERNVGQGSELKIKRGLNELWNKGGIQYAPAVR 343 >gi|261210913|ref|ZP_05925203.1| amino acid ABC transporter amino acid-binding protein [Vibrio sp. RC341] gi|260839888|gb|EEX66488.1| amino acid ABC transporter amino acid-binding protein [Vibrio sp. RC341] Length = 342 Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats. Identities = 165/318 (51%), Positives = 227/318 (71%), Gaps = 3/318 (0%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L + +GF+ CG++TGL GF+ A GDW+G DV++C+AL++A+ D +K++++PL Sbjct: 28 STLDKVLSQGFITCGVSTGLPGFSNPNAKGDWEGIDVEYCQALAAAVLGDKTKVKFVPLT 87 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 AKERF ALQS +ID+LSRNT WTL R+ +LGL F + Y+DGQGF++ K G+ S +L Sbjct: 88 AKERFTALQSGEIDVLSRNTTWTLQRDSALGLNFVGVNYYDGQGFMVKKDLGVKSAKELD 147 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 GAS+CVQ+GTTTEL LADYF+ MKY P+VF+ + + A RCD T D S LYAL Sbjct: 148 GASVCVQSGTTTELNLADYFRNSGMKYKPVVFDTAAQTSKGFDAGRCDVLTTDQSGLYAL 207 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 +L ++P V+LP+IISK PL P + Q D +W+N+ WT YAMV AEE GIT KN++++ Sbjct: 208 RLNLEKPDSAVVLPEIISKEPLGPVVRQDDDKWFNVAKWTLYAMVNAEEYGITSKNVDEM 267 Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324 K + NP+V+R LG+D G LG+ DW+Y+I++ +GNYGE F+R +G S L+I R Sbjct: 268 MK-SENPEVKRILGLDGPK--GTGLGIRDDWSYQIVKQVGNYGESFERTVGKGSPLQIDR 324 Query: 325 GYNALWSKGGLMYAPPIR 342 G NALW+ GG MYAPPIR Sbjct: 325 GVNALWNAGGFMYAPPIR 342 >gi|15641374|ref|NP_231006.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121587999|ref|ZP_01677751.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae 2740-80] gi|121728530|ref|ZP_01681553.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae V52] gi|153212726|ref|ZP_01948383.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae 1587] gi|153819348|ref|ZP_01972015.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae NCTC 8457] gi|153821335|ref|ZP_01974002.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae B33] gi|153825294|ref|ZP_01977961.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae MZO-2] gi|153828770|ref|ZP_01981437.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae 623-39] gi|183179360|ref|ZP_02957571.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae MZO-3] gi|227081533|ref|YP_002810084.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae M66-2] gi|229505057|ref|ZP_04394567.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae BX 330286] gi|229511273|ref|ZP_04400752.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae B33] gi|229515734|ref|ZP_04405193.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae TMA 21] gi|229518391|ref|ZP_04407835.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae RC9] gi|229521468|ref|ZP_04410887.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae TM 11079-80] gi|229529562|ref|ZP_04418952.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae 12129(1)] gi|229608061|ref|YP_002878709.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae MJ-1236] gi|254225346|ref|ZP_04918958.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae V51] gi|254286186|ref|ZP_04961146.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae AM-19226] gi|254848484|ref|ZP_05237834.1| amino acid ABC transporter [Vibrio cholerae MO10] gi|255745749|ref|ZP_05419697.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholera CIRS 101] gi|262158973|ref|ZP_06030085.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae INDRE 91/1] gi|262192389|ref|ZP_06050542.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae CT 5369-93] gi|297578947|ref|ZP_06940875.1| amino acid ABC transporter [Vibrio cholerae RC385] gi|298498554|ref|ZP_07008361.1| amino acid ABC transporter [Vibrio cholerae MAK 757] gi|9655856|gb|AAF94520.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121547740|gb|EAX57831.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae 2740-80] gi|121629194|gb|EAX61634.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae V52] gi|124116376|gb|EAY35196.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae 1587] gi|125622187|gb|EAZ50509.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae V51] gi|126510093|gb|EAZ72687.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae NCTC 8457] gi|126521153|gb|EAZ78376.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae B33] gi|148875723|gb|EDL73858.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae 623-39] gi|149741122|gb|EDM55181.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae MZO-2] gi|150423855|gb|EDN15796.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae AM-19226] gi|183012771|gb|EDT88071.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae MZO-3] gi|227009421|gb|ACP05633.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae M66-2] gi|229333336|gb|EEN98822.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae 12129(1)] gi|229341566|gb|EEO06569.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae TM 11079-80] gi|229345106|gb|EEO10080.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae RC9] gi|229347503|gb|EEO12463.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae TMA 21] gi|229351238|gb|EEO16179.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae B33] gi|229357280|gb|EEO22197.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae BX 330286] gi|229370716|gb|ACQ61139.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae MJ-1236] gi|254844189|gb|EET22603.1| amino acid ABC transporter [Vibrio cholerae MO10] gi|255736824|gb|EET92221.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholera CIRS 101] gi|262029158|gb|EEY47810.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae INDRE 91/1] gi|262031742|gb|EEY50327.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae CT 5369-93] gi|297536541|gb|EFH75374.1| amino acid ABC transporter [Vibrio cholerae RC385] gi|297542887|gb|EFH78937.1| amino acid ABC transporter [Vibrio cholerae MAK 757] gi|327484032|gb|AEA78439.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Vibrio cholerae LMA3894-4] Length = 342 Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats. Identities = 163/318 (51%), Positives = 227/318 (71%), Gaps = 3/318 (0%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L + +GF+ CG++TGL GF+ A G+W+G DV++C+A+++A+ D +K++++PL Sbjct: 28 STLDKVLSQGFITCGVSTGLPGFSNPNAKGEWEGIDVEYCQAMAAAVLGDKTKVKFVPLT 87 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 AKERF ALQS +ID+LSRNT WTL R+ +LGL F + Y+DGQGF++ K G+ S +L+ Sbjct: 88 AKERFTALQSGEIDVLSRNTTWTLQRDSALGLNFVGVNYYDGQGFMVKKDLGVKSAKELN 147 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 GAS+CVQ+GTTTEL LADYF+ M Y P+VF+ + + A RCD T D S LYAL Sbjct: 148 GASVCVQSGTTTELNLADYFRNSGMTYKPVVFDTAAQTSKGFDAGRCDVLTTDQSGLYAL 207 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 +L ++P V+LP+IISK PL P + Q D +W+N+ W YAMV AEE GIT KN++++ Sbjct: 208 RLNLEKPDSAVVLPEIISKEPLGPVVRQDDDKWFNVAKWVLYAMVNAEEYGITSKNVDEM 267 Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324 K + NP+V+R LG+D G LG+ DW+Y+I++ +GNYGE FDR +G+ S LKI R Sbjct: 268 MK-SDNPEVKRILGLDGPK--GTGLGIRDDWSYQIVKQVGNYGESFDRTVGSGSPLKIDR 324 Query: 325 GYNALWSKGGLMYAPPIR 342 G NALW+ GG MYAPPIR Sbjct: 325 GVNALWNAGGFMYAPPIR 342 >gi|283788089|ref|YP_003367954.1| Putative ABC transporter, substrate-binding protein [Citrobacter rodentium ICC168] gi|282951543|emb|CBG91242.1| Putative ABC transporter, substrate-binding protein [Citrobacter rodentium ICC168] Length = 337 Score = 434 bits (1116), Expect = e-120, Method: Composition-based stats. Identities = 156/339 (46%), Positives = 229/339 (67%), Gaps = 3/339 (0%) Query: 5 FFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 ++ +L T+A + L +KK+GF++CGI+ GL GF+ A+G + G DVD Sbjct: 1 MIATLAAAGVLIAVVNQTHAGATLDAVKKKGFVQCGISDGLPGFSYADADGKFSGIDVDV 60 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 CR +++A+ D SK++Y PL AKERF ALQS ++D+LSRNT WT R+ +G++F +TY Sbjct: 61 CRGVAAAVLGDDSKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMSFTGVTY 120 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 +DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R +E Sbjct: 121 YDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRSDESA 180 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 A + RCD D S LYAL++ P E ++LP++ISK PL P + +GD EW+ IV W Sbjct: 181 KALESGRCDTLASDQSQLYALRIKLSNPGEWIVLPEVISKEPLGPVVRRGDDEWFAIVRW 240 Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHM 303 T +AM+ AEE+G+T KN+++ + + PD+ LG + + G+ L L W Y +I+ + Sbjct: 241 TLFAMLNAEEMGVTSKNVDEKAANPATPDMAHLLGKEG--DYGKDLKLDNTWAYNVIKQV 298 Query: 304 GNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 GNYAEIFERNVGSESPLKIERGQNNLWNNGGIQYAPPVR 337 >gi|153008737|ref|YP_001369952.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC 49188] gi|151560625|gb|ABS14123.1| extracellular solute-binding protein family 3 [Ochrobactrum anthropi ATCC 49188] Length = 339 Score = 434 bits (1116), Expect = e-119, Method: Composition-based stats. Identities = 163/342 (47%), Positives = 223/342 (65%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K S+L A L +K+RG + CG++ G+ GF+ G W GFD Sbjct: 1 MKKIVLGSLLAAGFAMSAQSGAQADTLSTVKERGKINCGVSQGVAGFSSPDDQGKWTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS +D+LSR T WTL R+ +G+ F Sbjct: 61 IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVG 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+DGQGF++ K GI S +L GAS+C + GTTTE AD+F A+++KY P+V + + Sbjct: 121 TAYYDGQGFMIRKDLGIDSALKLDGASVCTEQGTTTEQNAADFFSANSIKYEPVVIDSAD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 I A+ RCD YT D SALYA +L P +LP++ISK PL PA+ QGD +W+NI Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPDAFTVLPEVISKEPLGPAVRQGDDKWFNI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEELGITQ + + ++ PDV+RFLG + + G+ LGL W Y ++ Sbjct: 241 VRWTLFAMLEAEELGITQASAD-ADLNSKKPDVRRFLGSEG--DSGQQLGLEPKWAYNVV 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGEMF+R +G S LKI RG NALW+KGGLMYAPP++ Sbjct: 298 SKIGNYGEMFERTIGKGSLLKIDRGINALWNKGGLMYAPPVK 339 >gi|261819589|ref|YP_003257695.1| extracellular solute-binding protein family 3 [Pectobacterium wasabiae WPP163] gi|261603602|gb|ACX86088.1| extracellular solute-binding protein family 3 [Pectobacterium wasabiae WPP163] Length = 341 Score = 434 bits (1116), Expect = e-119, Method: Composition-based stats. Identities = 161/343 (46%), Positives = 233/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M + +++ LF +A L I+K+GF++CGI+ GL GF+ ANG + G Sbjct: 1 MKRIVISTLVAGASLFAAINQAHAGTTLDAIQKKGFVQCGISDGLPGFSYADANGKYSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +G+ F Sbjct: 61 DVDVCRGIAAAVFGDANKVKYSPLTAKERFTALQSGEVDVLSRNTTWTSSRDGGMGMLFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G++S +L GA++C+QAGT TEL +ADYFK H M+Y P+ F+R Sbjct: 121 GVTYYDGIGFLTHNKAGLTSAKELDGATVCIQAGTDTELNVADYFKTHKMQYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ +P+E ++LP++ISK PL P + +GD EW+ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSKPAEFIVLPEVISKEPLGPVVRRGDEEWFA 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+ +T KN++Q++ T PD+ LG + S G+ L L DW ++I Sbjct: 241 IVRWTLFAMLNAEEMDVTSKNVDQLAAKPTTPDMSHLLGHEGS--YGKDLKLPNDWAFKI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNYGE+F+RN+G SELKI RG N LW+KGG+ YAP +R Sbjct: 299 IKQVGNYGEIFERNVGMGSELKIKRGLNELWNKGGIQYAPAVR 341 >gi|254703267|ref|ZP_05165095.1| hypothetical protein Bsuib36_04929 [Brucella suis bv. 3 str. 686] gi|261753898|ref|ZP_05997607.1| extracellular solute-binding protein family 3 [Brucella suis bv. 3 str. 686] gi|261743651|gb|EEY31577.1| extracellular solute-binding protein family 3 [Brucella suis bv. 3 str. 686] Length = 339 Score = 434 bits (1116), Expect = e-119, Method: Composition-based stats. Identities = 166/342 (48%), Positives = 227/342 (66%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++L A L +K+RG + CG++ G+ GF+ G W GFD Sbjct: 1 MKKAVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDGWGKWTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS +D+LSR T WTL R+ +G+ F Sbjct: 61 IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVG 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+DGQGF++ K G+ S +L GASIC + GTTTE +ADYF AHN+KY P+V + + Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSAD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 I A+ RCD YT D SALYA +L P +++LP++ISK PL PA+ QGD +W+NI Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +A++ AEELGITQK + D+ PD++RFLG + + G+ LGL W Y I+ Sbjct: 241 VRWTLFALLEAEELGITQKTV-AADLDSRKPDIRRFLGSEG--DNGQQLGLEPKWAYNIV 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGEMF+R +G S LKI RG NALW+KGGLMYAPP++ Sbjct: 298 ASVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339 >gi|308188311|ref|YP_003932442.1| amino-acid ABC transporter-binding protein yhdW precursor [Pantoea vagans C9-1] gi|308058821|gb|ADO10993.1| Putative amino-acid ABC transporter-binding protein yhdW precursor [Pantoea vagans C9-1] Length = 341 Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats. Identities = 159/343 (46%), Positives = 227/343 (66%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K +++ L + +A L IKK+GF++CGI+ GL GF+ A G + G Sbjct: 1 MKKMMLSTLIAAASLVAIAQQAHAGTTLDAIKKKGFVQCGISDGLPGFSYADAGGKFTGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CRA ++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +G F Sbjct: 61 DVDVCRAAAAAVFGDATKVKYTPLTAKERFTALQSGEVDVLSRNTTWTSSRDGGMGFLFA 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Y+DG GF+ H+K G+ S +L GA++C+QAGT TEL +AD+FKA+ M+Y P+ F+R Sbjct: 121 GVNYYDGIGFLTHQKAGLKSAKELDGATVCIQAGTDTELNVADFFKANKMQYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ +P E ++LP++ISK PL P + +GD +W+ Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDEFIVLPEVISKEPLGPLVRRGDDDWFT 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV W+ YAM+ AEE+GI KN++Q++ T PD+ LG + + G+ L L W Y I Sbjct: 241 IVKWSLYAMLNAEEMGINSKNVDQMTAKPTTPDMAHLLGAEG--DFGKDLKLDNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E FDRN+G S LKI RG NALW++GG+ YAPP+R Sbjct: 299 IKQVGNYQESFDRNVGKDSALKIARGQNALWNQGGIQYAPPVR 341 >gi|258621541|ref|ZP_05716574.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio mimicus VM573] gi|258627556|ref|ZP_05722333.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio mimicus VM603] gi|262171608|ref|ZP_06039286.1| amino acid ABC transporter amino acid-binding protein [Vibrio mimicus MB-451] gi|258580138|gb|EEW05110.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio mimicus VM603] gi|258586159|gb|EEW10875.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio mimicus VM573] gi|261892684|gb|EEY38670.1| amino acid ABC transporter amino acid-binding protein [Vibrio mimicus MB-451] Length = 342 Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats. Identities = 164/318 (51%), Positives = 227/318 (71%), Gaps = 3/318 (0%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L + +GF+ CG++TGL GF+ A GDW+G DV++C+AL++A+ D +K++++PL Sbjct: 28 STLDKVLAQGFITCGVSTGLPGFSNPNAKGDWEGIDVEYCQALAAAVLGDKTKVKFVPLT 87 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 AKERF ALQS +ID+LSRNT WTL R+ +LGL F + Y+DGQGF++ K GI S +L Sbjct: 88 AKERFTALQSGEIDVLSRNTTWTLQRDSALGLNFVGVNYYDGQGFMVKKDLGIKSAKELD 147 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 GAS+CVQ+GTTTEL LADYF+ MKY P+VF+ + + A RCD T D S LYAL Sbjct: 148 GASVCVQSGTTTELNLADYFRNSGMKYKPVVFDTAAQTSKGFDAGRCDVLTTDQSGLYAL 207 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 +L ++P ++LP+IISK PL P + Q D +W+N+ W YAMV AEE GIT KN++++ Sbjct: 208 RLNLEKPDSALVLPEIISKEPLGPVVRQDDDKWFNVAKWVLYAMVNAEEYGITSKNVDEM 267 Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324 K + NP+V+R LG+D G LG+ DW+Y+I++ +GNYGE F+R +G+ S L+I R Sbjct: 268 MK-SDNPEVKRILGLDGPK--GTGLGIRDDWSYQIVKQVGNYGESFERTVGSGSPLQIDR 324 Query: 325 GYNALWSKGGLMYAPPIR 342 G NALW+ GG MYAPPIR Sbjct: 325 GVNALWNAGGFMYAPPIR 342 >gi|156935788|ref|YP_001439704.1| hypothetical protein ESA_03659 [Cronobacter sakazakii ATCC BAA-894] gi|156534042|gb|ABU78868.1| hypothetical protein ESA_03659 [Cronobacter sakazakii ATCC BAA-894] Length = 341 Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats. Identities = 162/343 (47%), Positives = 233/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K ++ LF + +A + L +KK+GF++CGI+ GL GF+ A G + G Sbjct: 1 MKKMMIATLAAAGALFAVANQAHAGATLDSVKKKGFVQCGISDGLPGFSYADAGGKFTGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D SK++Y PL AKERF ALQS ++D+LSRNT WT R+ +G++F Sbjct: 61 DVDVCRGVAAAVFGDASKVKYTPLTAKERFTALQSGEVDVLSRNTTWTSSRDAGMGMSFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + +GD EW++ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GI KN++ + + + PD+ LG + + G+ L L W Y I Sbjct: 241 IVRWTLFAMLNAEEMGIDSKNVDAKAANPSTPDMAHLLGKEG--DYGKDLKLDNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNYGE+F+RN+G +S LKI RG N LW+KGG+ YAPP+R Sbjct: 299 IKQVGNYGEIFERNVGQESPLKIKRGQNNLWNKGGIQYAPPVR 341 >gi|291619131|ref|YP_003521873.1| YhdW [Pantoea ananatis LMG 20103] gi|291154161|gb|ADD78745.1| YhdW [Pantoea ananatis LMG 20103] gi|327395461|dbj|BAK12883.1| putative amino-acid ABC transporter-binding protein YhdW precursor [Pantoea ananatis AJ13355] Length = 349 Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats. Identities = 156/343 (45%), Positives = 227/343 (66%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K +++ L + +A L IKK+GF++CGI+ GL GF+ A+G + G Sbjct: 9 MKKMMLSTLVAAASLLAVAQQAHAGPTLDAIKKKGFIQCGISDGLPGFSYADASGKFTGL 68 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CRA ++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +G F Sbjct: 69 DVDICRAAAAAVFGDATKVKYTPLTAKERFTALQSGEVDVLSRNTTWTSSRDGGMGFMFT 128 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Y+DG GF+ HKK G+ S +L GA++C+QAGT TEL +AD+FKA+ M+Y P+ F+R Sbjct: 129 GVNYYDGIGFLTHKKAGLKSAKELDGATVCIQAGTDTELNVADFFKANKMQYTPVTFDRS 188 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ +P + ++LP++ISK PL P + +GD +W+ Sbjct: 189 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDDFIVLPEVISKEPLGPLVRRGDDDWFT 248 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV W+ +AM+ AEE+GI KN+++++ PD+ LG + + G+ L L W Y I Sbjct: 249 IVKWSLFAMLNAEEMGINSKNVDEMTAKPATPDMAHLLGAEG--DFGKDLKLDNKWAYNI 306 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E FDRN+G S LKI RG NALW++GG+ YAPP+R Sbjct: 307 IKQVGNYQESFDRNVGKDSPLKIARGQNALWNQGGIQYAPPVR 349 >gi|114706424|ref|ZP_01439326.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Fulvimarina pelagi HTCC2506] gi|114538285|gb|EAU41407.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Fulvimarina pelagi HTCC2506] Length = 339 Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats. Identities = 167/342 (48%), Positives = 237/342 (69%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M F + L L + + A G +K+RG L+CG+NTGL GFA G+W+G D Sbjct: 1 MTIKFLTAALGLSVAALATAGAQAQTAGTVKERGSLRCGVNTGLPGFASQNDQGEWQGLD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+CRA+++A+ DP + + PL+A +RF ALQ+ +ID+L+RNT WT+ R+ +LGL F Sbjct: 61 VDYCRAVATAVLGDPQAVTFSPLSAVQRFPALQNNEIDLLARNTTWTMDRDTALGLDFAG 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ G++S +LSGA++CVQ+GTTTEL LADYF+A++M Y+P+V E Sbjct: 121 VNYYDGQGFMVKNDLGVNSALELSGATVCVQSGTTTELNLADYFEANDMDYNPVVIESQS 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 ++++AY + RCD T D S L A +L P H ILP+IISK PL PA+ QGD +W +I Sbjct: 181 DVNSAYDSGRCDVLTTDASGLAASRLEMSNPDNHTILPEIISKEPLGPAVRQGDDQWADI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WTHYA++ AEELG+ Q N+ ++ K++ NPD++R LG D N GE LGL +DW ++I Sbjct: 241 VRWTHYALLNAEELGVNQGNVEEM-KNSDNPDIRRLLGQDS--NFGEPLGLPQDWAAQVI 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGE+F+RN+G + LKI RG NALW+ GGL Y P+R Sbjct: 298 SAVGNYGEIFERNIGVNTPLKIQRGQNALWTDGGLQYGMPVR 339 >gi|300817474|ref|ZP_07097690.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 107-1] gi|300824982|ref|ZP_07105081.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 119-7] gi|331670093|ref|ZP_08370938.1| putative amino-acid ABC transporter-binding protein YhdW [Escherichia coli TA271] gi|331679342|ref|ZP_08380014.1| putative amino-acid ABC transporter-binding protein YhdW [Escherichia coli H591] gi|300522548|gb|EFK43617.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 119-7] gi|300529772|gb|EFK50834.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 107-1] gi|331063006|gb|EGI34920.1| putative amino-acid ABC transporter-binding protein YhdW [Escherichia coli TA271] gi|331073407|gb|EGI44730.1| putative amino-acid ABC transporter-binding protein YhdW [Escherichia coli H591] Length = 341 Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats. Identities = 158/343 (46%), Positives = 234/343 (68%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K ++ +L + +A + L ++K+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +G+AF Sbjct: 61 DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL PA+ +GD EW++ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPAVRRGDDEWFS 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GI +N+++ + + PD+ LG + + G+ L L W Y I Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKEG--DYGKDLKLDNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341 >gi|89093226|ref|ZP_01166176.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Oceanospirillum sp. MED92] gi|89082522|gb|EAR61744.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Oceanospirillum sp. MED92] Length = 337 Score = 433 bits (1113), Expect = e-119, Method: Composition-based stats. Identities = 168/342 (49%), Positives = 233/342 (68%), Gaps = 5/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + S++ + SF A L D++KRG + CG++TGL GF++ NG W G D Sbjct: 1 MKR--LTSVIATGLALGLSFGAQAGTLEDVQKRGSVSCGVSTGLAGFSQKDENGTWSGLD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD CR++++A+ D SK+QY PL AKERF ALQS +IDILSRNT WT R+ SLGL F Sbjct: 59 VDVCRSVAAAVLGDASKVQYKPLTAKERFTALQSGEIDILSRNTTWTHTRDTSLGLNFAG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K G+SS L GA++C+QAGTTTEL LADYF+A+ + Y+ I F+ + Sbjct: 119 VNYYDGQGFMVSKDLGVSSALDLDGAAVCIQAGTTTELNLADYFRANGITYNAITFDTSD 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A + + RCD T D S LYAL++ PS ++LP++ISK PL P + QGD +W+NI Sbjct: 179 QTRAGFESGRCDVLTSDQSQLYALRIGLKDPSSAMVLPEVISKEPLGPVVRQGDDQWFNI 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V W+ YAMV AE +GI N +Q +K NP QR +G+D ++ GE +G++ DW Y I+ Sbjct: 239 VKWSVYAMVEAEFMGINSANADQ-AKSQGNPGQQRLMGVD--TDSGEKMGISNDWAYNIV 295 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE F+RN+G S LKI RG NA W+KGG+MY+ P+R Sbjct: 296 KQVGNYGESFERNVGQGSPLKISRGLNAQWNKGGIMYSSPVR 337 >gi|49087174|gb|AAT51425.1| PA3858 [synthetic construct] Length = 342 Score = 433 bits (1113), Expect = e-119, Method: Composition-based stats. Identities = 157/342 (45%), Positives = 236/342 (69%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + +L + L ++ + + L K++G+++CG++ GL GF+ A G +KG D Sbjct: 4 MKGTWL--LLAAVCLGASATAEAGATLDAGKRKGYVQCGVSDGLPGFSYADAKGRFKGLD 61 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD CRAL++A+F D K+++ PL+A ERF ALQS +D+LSRNT WT R+ +LG+ F Sbjct: 62 VDICRALAAALFGDAEKVRFTPLSATERFSALQSGTVDLLSRNTSWTSSRDTALGIHFTG 121 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TYFDGQGF++++K G+SS +L A++C+Q+GTT EL +ADYF+AH ++Y ++ + E Sbjct: 122 VTYFDGQGFLVNRKLGVSSARELKDATVCIQSGTTNELNVADYFRAHGIRYKAVLDDSYE 181 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A A +CD + D S LYA +L +P ++V+LP++ISK PL PA+ QGD W+NI Sbjct: 182 KSARALEAGQCDVLSSDQSQLYAQRLKLAKPEQYVVLPEVISKEPLGPAVRQGDEAWFNI 241 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT Y ++ AEELG+T N+ + ++D+ NPDV R LG + + G+ L L +DW +++ Sbjct: 242 VRWTLYGLLNAEELGVTSSNVERQARDSRNPDVARLLGSEG--DAGKDLQLPRDWVVQMV 299 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 R +GNYGE+F RN+G+ S LK+PRG NA W+ GGL YAPPIR Sbjct: 300 RQVGNYGEIFARNVGDGSPLKMPRGLNAQWNLGGLHYAPPIR 341 >gi|187730695|ref|YP_001881960.1| amino acid ABC transporter periplasmic amino acid-binding protein [Shigella boydii CDC 3083-94] gi|187427687|gb|ACD06961.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Shigella boydii CDC 3083-94] gi|320177109|gb|EFW52125.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Shigella dysenteriae CDC 74-1112] Length = 341 Score = 433 bits (1113), Expect = e-119, Method: Composition-based stats. Identities = 157/343 (45%), Positives = 234/343 (68%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K ++ +L + +A + L ++K+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR++++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +G+AF Sbjct: 61 DVDVCRSVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + +GD EW++ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GI +N+++ + + PD+ LG + + G+ L L W Y I Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKEG--DYGKDLKLDNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341 >gi|237799855|ref|ZP_04588316.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022710|gb|EGI02767.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 322 Score = 433 bits (1113), Expect = e-119, Method: Composition-based stats. Identities = 159/324 (49%), Positives = 224/324 (69%), Gaps = 2/324 (0%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 + + L I+K+GF++CG++ GL GF+ +NG G D D CRA+++A+F D +K+ Sbjct: 1 GAANAGATLDAIQKKGFVQCGVSDGLPGFSVPDSNGKITGIDADVCRAVAAAVFGDATKV 60 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 ++ LNAKERF ALQS +IDILSRNT WT R+ +GL F +TY+DG GF+++ K G+ Sbjct: 61 KFSQLNAKERFTALQSGEIDILSRNTTWTSSRDAGMGLVFTGVTYYDGIGFLVNNKLGVK 120 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 S +L GA+IC+QAGTTTEL ++DYF+++ +KY PI F+ +E + RCD T D Sbjct: 121 SAKELDGATICIQAGTTTELNVSDYFRSNGLKYTPITFDTSDESAKSLEGGRCDVLTSDQ 180 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 S LYA + +P ++V+LP++ISK PL P + +GD EW++IV WT +AM+ AEE IT Sbjct: 181 SQLYAQRSKLAKPDDYVVLPEVISKEPLGPVVRKGDEEWFSIVRWTLFAMLNAEEAKITS 240 Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318 KN+ +K T NPDV R LG D + G+ L L KDW +I++ +GNYGE+F+RNLG + Sbjct: 241 KNVEAEAKSTKNPDVARMLGADGT--YGKDLKLPKDWVVQIVKQVGNYGEVFERNLGENT 298 Query: 319 ELKIPRGYNALWSKGGLMYAPPIR 342 LKI RG NALW+ GG+ YAPPIR Sbjct: 299 PLKIKRGQNALWNAGGIQYAPPIR 322 >gi|237730186|ref|ZP_04560667.1| amino acid ABC transporter [Citrobacter sp. 30_2] gi|226908792|gb|EEH94710.1| amino acid ABC transporter [Citrobacter sp. 30_2] Length = 341 Score = 433 bits (1113), Expect = e-119, Method: Composition-based stats. Identities = 159/343 (46%), Positives = 232/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K S+ +L + +A + L +KK+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKMIIASLAAAGVLLAVANQAHAGATLDAVKKKGFVQCGISDGLPGFSYADASGKFSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR ++SA+F D SK++Y PL AKERF ALQS ++D+LSRNT WT R+ +G++F Sbjct: 61 DVDVCRGVASAVFGDDSKVKYTPLTAKERFTALQSGEVDMLSRNTTWTSSRDAGMGMSFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+ MKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + +GD EW++ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+G+ KN+++ + + PD+ LG + + G+ L L W Y I Sbjct: 241 IVRWTLFAMLNAEEMGVNSKNVDEKAANPATPDMAHLLGKEG--DYGKDLKLDNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341 >gi|319957434|ref|YP_004168697.1| amino acid ABC transporter substrate-binding protein, paat family [Nitratifractor salsuginis DSM 16511] gi|319419838|gb|ADV46948.1| amino acid ABC transporter substrate-binding protein, PAAT family [Nitratifractor salsuginis DSM 16511] Length = 338 Score = 433 bits (1113), Expect = e-119, Method: Composition-based stats. Identities = 159/315 (50%), Positives = 225/315 (71%), Gaps = 2/315 (0%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 D+KK G LKCG+NTGL GF+E + G W+G DVD+CRAL++ + D SK++Y+PLNAKE Sbjct: 26 DDVKKAGILKCGVNTGLPGFSEADSKGQWRGLDVDYCRALAAVVLGDASKVKYVPLNAKE 85 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 RF ALQS +ID+LSRNT T R+ SLG+ F + Y+DGQGF++ K G+ S +L GA+ Sbjct: 86 RFTALQSGEIDVLSRNTTNTETRDTSLGINFTGVMYYDGQGFMVPKSLGVKSAKELDGAT 145 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 +C+QAGTTTEL LADYF+A++MK+ I F+ +++ A+ A RCD T D S LYA + Sbjct: 146 VCIQAGTTTELNLADYFRANHMKFKAITFDTNDQVTKAFEAGRCDVLTTDASGLYATRTK 205 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 P ++V+LP+IISK PLAPA+ GD +W++I WT A++TAEE GIT N+++ Sbjct: 206 LANPEKYVVLPEIISKEPLAPAVRHGDDQWFDIAKWTRNALLTAEEKGITMANVDEAKAK 265 Query: 268 TTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYN 327 +T+P+V+R L ++ + + L L K Y I+ +GNYGE+F+RN+G ++ LKI RG N Sbjct: 266 STDPEVKRLLSVEG--KMCDNLKLEKGCFYNAIKQVGNYGEIFERNVGVKTPLKIQRGLN 323 Query: 328 ALWSKGGLMYAPPIR 342 ALW++GGL Y+PP R Sbjct: 324 ALWTQGGLQYSPPFR 338 >gi|154248466|ref|YP_001419424.1| extracellular solute-binding protein [Xanthobacter autotrophicus Py2] gi|154162551|gb|ABS69767.1| extracellular solute-binding protein family 3 [Xanthobacter autotrophicus Py2] Length = 336 Score = 433 bits (1113), Expect = e-119, Method: Composition-based stats. Identities = 158/343 (46%), Positives = 232/343 (67%), Gaps = 8/343 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + F ++ L + + NA+ L ++K RG + CG++ GL GF+ +W G D Sbjct: 1 MKRILFAAV----GLLSLAGAVNAATLDEVKARGSVNCGVSQGLPGFSSPNDKNEWGGLD 56 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDFCRA+++AIF+DP+K+++ PL+AK+RF AL S ID+LSRNT WT+ R+ +LG F Sbjct: 57 VDFCRAIAAAIFNDPAKVKFSPLSAKDRFTALTSGAIDVLSRNTTWTMSRDTTLGFNFAG 116 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY-HPIVFERV 179 + Y+DGQGF++ K G+ S +L GASICVQ GT+ EL ++D+F+++NMK I F + Sbjct: 117 VIYYDGQGFLVRKALGLKSAKELQGASICVQTGTSNELNVSDFFRSNNMKNGEVIAFGTI 176 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E AY + RCD +T D S L A++L ++HVILP+ ISK PL P + GD +W++ Sbjct: 177 DETVKAYESGRCDVFTADRSQLAAVRLKLTNAADHVILPETISKEPLGPLVRHGDDQWFD 236 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 +V W ++A++ AEELG+TQKN+++ ++ NPDV+R LG D GE +GLT DW RI Sbjct: 237 LVKWVYFALLNAEELGVTQKNVDEQV-NSQNPDVKRLLGTDG--KYGEGIGLTADWAVRI 293 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ GNYGE++DRN+G + L I RG N LW+KGG+ Y P+R Sbjct: 294 IKATGNYGEIYDRNVGPATPLGIERGLNNLWNKGGIQYGMPVR 336 >gi|157162750|ref|YP_001460068.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli HS] gi|170018489|ref|YP_001723443.1| extracellular solute-binding protein [Escherichia coli ATCC 8739] gi|170682914|ref|YP_001745538.1| amino acid ABC transporter periplasmic amino acid-binding protein [Escherichia coli SMS-3-5] gi|188493987|ref|ZP_03001257.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli 53638] gi|194440030|ref|ZP_03072087.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli 101-1] gi|253771901|ref|YP_003034732.1| extracellular solute-binding protein family 3 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254038434|ref|ZP_04872492.1| amino acid ABC transporter [Escherichia sp. 1_1_43] gi|256024158|ref|ZP_05438023.1| extracellular solute-binding protein family 3 [Escherichia sp. 4_1_40B] gi|297518104|ref|ZP_06936490.1| extracellular solute-binding protein family 3 [Escherichia coli OP50] gi|300916765|ref|ZP_07133475.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 115-1] gi|300928696|ref|ZP_07144214.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 187-1] gi|300946948|ref|ZP_07161179.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 116-1] gi|300958250|ref|ZP_07170397.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 175-1] gi|301028300|ref|ZP_07191560.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 196-1] gi|301647044|ref|ZP_07246876.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 146-1] gi|307139956|ref|ZP_07499312.1| extracellular solute-binding protein family 3 [Escherichia coli H736] gi|312972463|ref|ZP_07786637.1| general L-amino acid-binding periplasmic protein aapJ [Escherichia coli 1827-70] gi|331643968|ref|ZP_08345099.1| putative amino-acid ABC transporter-binding protein YhdW [Escherichia coli H736] gi|331654867|ref|ZP_08355867.1| putative amino-acid ABC transporter-binding protein YhdW [Escherichia coli M718] gi|157068430|gb|ABV07685.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli HS] gi|169753417|gb|ACA76116.1| extracellular solute-binding protein family 3 [Escherichia coli ATCC 8739] gi|170520632|gb|ACB18810.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli SMS-3-5] gi|188489186|gb|EDU64289.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli 53638] gi|194421034|gb|EDX37064.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli 101-1] gi|226840058|gb|EEH72079.1| amino acid ABC transporter [Escherichia sp. 1_1_43] gi|253322945|gb|ACT27547.1| extracellular solute-binding protein family 3 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|299878643|gb|EFI86854.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 196-1] gi|300315068|gb|EFJ64852.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 175-1] gi|300415951|gb|EFJ99261.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 115-1] gi|300453408|gb|EFK17028.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 116-1] gi|300463285|gb|EFK26778.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 187-1] gi|301074794|gb|EFK89600.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 146-1] gi|310334840|gb|EFQ01045.1| general L-amino acid-binding periplasmic protein aapJ [Escherichia coli 1827-70] gi|315617078|gb|EFU97688.1| general L-amino acid-binding periplasmic protein aapJ [Escherichia coli 3431] gi|323936248|gb|EGB32540.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli E1520] gi|323970317|gb|EGB65587.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli TA007] gi|331037439|gb|EGI09663.1| putative amino-acid ABC transporter-binding protein YhdW [Escherichia coli H736] gi|331048249|gb|EGI20326.1| putative amino-acid ABC transporter-binding protein YhdW [Escherichia coli M718] Length = 341 Score = 432 bits (1112), Expect = e-119, Method: Composition-based stats. Identities = 157/343 (45%), Positives = 233/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K ++ +L + +A + L ++K+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +G+AF Sbjct: 61 DVDICRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + +GD EW++ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GI +N+++ + + PD+ LG + + G+ L L W Y I Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKEG--DYGKDLKLDNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341 >gi|323941639|gb|EGB37818.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli E482] Length = 341 Score = 432 bits (1112), Expect = e-119, Method: Composition-based stats. Identities = 156/343 (45%), Positives = 232/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K ++ +L + +A + L ++K+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +G+AF Sbjct: 61 DVDICRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + + D EW++ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRADDEWFS 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GI +N+++ + + PD+ LG + + G+ L L W Y I Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKEG--DYGKDLKLDNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341 >gi|317122275|ref|YP_004102278.1| amino acid ABC transporter substrate-binding protein, PAAT family [Thermaerobacter marianensis DSM 12885] gi|315592255|gb|ADU51551.1| amino acid ABC transporter substrate-binding protein, PAAT family [Thermaerobacter marianensis DSM 12885] Length = 366 Score = 432 bits (1112), Expect = e-119, Method: Composition-based stats. Identities = 142/318 (44%), Positives = 214/318 (67%), Gaps = 3/318 (0%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L + +RG L CG+N L GF+ + NG GFD DFCRA+++A+FDDP+ +++ PL+ Sbjct: 52 SRLQVVLQRGKLICGVNGQLPGFSYLDPNGQMTGFDADFCRAIAAALFDDPNAVEFRPLS 111 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 A+ERF A+QS ++D+L RNT WTL R+ G+ F P T++DG G ++ K + + +++ L Sbjct: 112 AQERFTAVQSGEVDVLIRNTTWTLGRDTVNGMEFAPTTFYDGGGIMVRKDRNVKTLADLD 171 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 GA+ICV +GTT E+ L D +A + P FE +++ A Y + CDA T D S L Sbjct: 172 GATICVLSGTTNEMVLTDRMRALGASFTPKTFEDADQLYATYESGGCDAVTSDKSQLAGR 231 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 + P HVIL +++SK PL PA+ D+ W+++V W YA + AEE GIT +N++Q Sbjct: 232 RAVLSDPDNHVILDEMLSKEPLGPAVKNNDSAWFDVVKWVVYATIQAEEFGITSQNVDQF 291 Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324 K++ NPD++RFLG++ +G+ LG++ D+ YR+I+H+GNYGE++DRNLG + K+ R Sbjct: 292 -KNSDNPDIRRFLGVEGE--LGQGLGISNDFAYRVIKHVGNYGEIYDRNLGPNTPFKLER 348 Query: 325 GYNALWSKGGLMYAPPIR 342 G N LW+ GGL+YAPP R Sbjct: 349 GLNELWTNGGLLYAPPFR 366 >gi|163800832|ref|ZP_02194732.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio sp. AND4] gi|159175181|gb|EDP59978.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio sp. AND4] Length = 342 Score = 432 bits (1112), Expect = e-119, Method: Composition-based stats. Identities = 165/338 (48%), Positives = 225/338 (66%), Gaps = 3/338 (0%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 I + T+ L + K+GFL CG++TGL GF+ A G+W+G DV++C Sbjct: 8 LASVIAASTTMLATTAHAADGTLEKVTKQGFLNCGVSTGLPGFSNPNAKGEWEGIDVEYC 67 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 +AL++A+ D SK++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F + Y+ Sbjct: 68 QALAAAVLGDKSKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVGVNYY 127 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 DGQGF++ K +SS L GAS+CVQ+GTTTEL LADYF+ M Y P+VF+ + Sbjct: 128 DGQGFMVKKDLEVSSAKDLDGASVCVQSGTTTELNLADYFRNQGMAYKPVVFDTAAQTSK 187 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + A RCD T D S LYAL+L + PS +LP+IISK PL P + QGD W+NI WT Sbjct: 188 GFDAGRCDVLTTDQSGLYALRLNLEDPSSATVLPEIISKEPLGPVVRQGDDRWFNIAKWT 247 Query: 245 HYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMG 304 MV AEE GI+ KN++++ K + +P+++R LG+D G+ LG+ DW Y++I+ +G Sbjct: 248 LATMVNAEEYGISSKNVDEMKK-SKDPNIKRILGVDGPK--GKGLGIRDDWGYQVIKQVG 304 Query: 305 NYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 NYGE F+R +G S L I RG NALW+ GG MYAPPIR Sbjct: 305 NYGESFERTVGTASPLNISRGVNALWNAGGFMYAPPIR 342 >gi|300937395|ref|ZP_07152230.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 21-1] gi|300457569|gb|EFK21062.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 21-1] Length = 354 Score = 432 bits (1112), Expect = e-119, Method: Composition-based stats. Identities = 157/343 (45%), Positives = 233/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K ++ +L + +A + L ++K+GF++CGI+ GL GF+ A+G + G Sbjct: 14 MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 73 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +G+AF Sbjct: 74 DVDICRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 133 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R Sbjct: 134 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 193 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + +GD EW++ Sbjct: 194 DESAKALESGRCDTLASDQSQLYALRIKLSNPTEWIVLPEVISKEPLGPVVRRGDDEWFS 253 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GI +N+++ + + PD+ LG + + G+ L L W Y I Sbjct: 254 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKEG--DYGKDLKLDNKWAYNI 311 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 312 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 354 >gi|146278537|ref|YP_001168696.1| cationic amino acid ABC transporter, periplasmic binding protein [Rhodobacter sphaeroides ATCC 17025] gi|145556778|gb|ABP71391.1| cationic amino acid ABC transporter, periplasmic binding protein [Rhodobacter sphaeroides ATCC 17025] Length = 338 Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats. Identities = 150/342 (43%), Positives = 221/342 (64%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ L + L + +A+ L D+K RG L CG++TGL GF+ ANG+W GFD Sbjct: 1 MKKSVFLGTLTVAGL--AAGLGSAATLDDVKARGELNCGVSTGLTGFSLPDANGNWTGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ D +K++++P + RF AL S ++D+L+RN+ WT R+ L L F Sbjct: 59 VALCRAVAAAVLGDGTKVKFVPTTGQTRFTALASGEVDMLARNSTWTFSRDTDLKLDFVG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K G++S +L GA++C+Q GTTTEL LAD+FK +N+ Y P+ E Sbjct: 119 VNYYDGQGFMVRKDLGVTSAKELDGATVCIQTGTTTELNLADWFKVNNLSYTPVAVETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + Y A CDAYT D S L A + P HVILP+IISK PL PA+ GD EW ++ Sbjct: 179 EGEQQYAAGACDAYTTDASGLAATRAAFADPENHVILPEIISKEPLGPAVRHGDNEWADV 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT A++ AEE G+T N+ +++ ++ NP+++R LG++ ++G + L KDW R I Sbjct: 239 VGWTLNALIAAEEYGVTSTNMEELAANSPNPEIRRLLGVEG--DLGPMIRLDKDWAKRAI 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F +G + + + RG NA W++GGL+YAPP R Sbjct: 297 SVGGNYGEIFAATIGEATPIGLARGLNAQWTQGGLLYAPPFR 338 >gi|92112255|ref|YP_572183.1| extracellular solute-binding protein [Chromohalobacter salexigens DSM 3043] gi|91795345|gb|ABE57484.1| amino acid ABC transporter substrate-binding protein, PAAT family [Chromohalobacter salexigens DSM 3043] Length = 342 Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats. Identities = 162/341 (47%), Positives = 224/341 (65%), Gaps = 2/341 (0%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 F V++ ++L + ++ A+ L D+K+RG L CG+N GL GF+ A+G+W+G DV Sbjct: 4 KNKFIVAVPAALLLSGFATASQAATLDDVKERGNLNCGVNVGLAGFSAPDADGNWQGLDV 63 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + CR ++SAIF DP + + PL AKERF ALQS +ID+LSRNT WT R+ SLGL F Sbjct: 64 ETCRGIASAIFGDPDNVVFTPLTAKERFTALQSGEIDVLSRNTTWTATRDNSLGLNFTAT 123 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 T++DGQGF++ K I S+ L+GASIC+Q+GTT EL LADYF + +++ + F+ ++ Sbjct: 124 TFYDGQGFMVSKDLNIESLEGLNGASICIQSGTTHELNLADYFPSRDIEIKTVTFDTPDQ 183 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + RCD T D S L AL+L P IL +ISK PL P + QGD +W +IV Sbjct: 184 TAQGFAHGRCDVLTSDTSQLSALRLQLPEPDSVEILETLISKEPLGPVVRQGDDQWLDIV 243 Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301 WT +AMV AEE+G+ N++++ + NP V R LG D N GE LGL DW Y II+ Sbjct: 244 QWTIFAMVNAEEMGVNSDNVDEMRDNPPNPGVARLLGKDG--NYGEQLGLPNDWAYNIIK 301 Query: 302 HMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++GNYGE+F +G S LKI RG NALW++GG++YAPPIR Sbjct: 302 NVGNYGEVFATTVGEDSPLKIQRGMNALWNEGGILYAPPIR 342 >gi|331684909|ref|ZP_08385501.1| putative amino-acid ABC transporter-binding protein YhdW [Escherichia coli H299] gi|331078524|gb|EGI49730.1| putative amino-acid ABC transporter-binding protein YhdW [Escherichia coli H299] Length = 341 Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats. Identities = 156/343 (45%), Positives = 232/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K ++ +L + +A + L ++K+G ++CGI+ GL GF+ A+G + G Sbjct: 1 MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGVVQCGISDGLPGFSYADADGKFSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +G+AF Sbjct: 61 DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + +GD EW++ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GI +N+++ + + PD+ LG + + G+ L L W Y I Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKEG--DYGKDLKLDNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341 >gi|254512097|ref|ZP_05124164.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Rhodobacteraceae bacterium KLH11] gi|221535808|gb|EEE38796.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Rhodobacteraceae bacterium KLH11] Length = 346 Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats. Identities = 154/342 (45%), Positives = 222/342 (64%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + I + + A + D+K RG L CG++TGLVGFA ANG W+GFD Sbjct: 9 MKKSVILGV--ATIAGLAAGAAAAGTVDDVKARGKLNCGVSTGLVGFAAPDANGVWQGFD 66 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ D + ++++P K RF AL S +ID+LSRNT WT R+ L F Sbjct: 67 VALCRAVAAAVLGDANAVEFVPTTTKTRFTALASGEIDMLSRNTTWTYSRDADLKFEFTG 126 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K G+ S +L GA +C+Q GTTTEL LAD+F+++N+ Y P+ E Sbjct: 127 VNYYDGQGFMVPKALGVGSAKELDGARVCIQTGTTTELNLADFFRSNNISYEPVPIETNA 186 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT D SAL + + T + P EH++LP+IISK PL P + G+ EW ++ Sbjct: 187 EAQQQYLAGACDVYTTDASALASTRATFENPDEHILLPEIISKEPLGPLVRHGENEWGDV 246 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT A++TAEELG+T NI+++S + NP+V R LG + N+GE +GL DW R I Sbjct: 247 VRWTLNALITAEELGVTSANIDEMSAGSNNPEVDRLLGTEG--NLGEMMGLDADWAARAI 304 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + GNYGE+F +N+G ++ + + RG NA W++GGL+Y+PP R Sbjct: 305 KAGGNYGELFAKNIGEETPIGLARGLNAQWTEGGLLYSPPFR 346 >gi|152998388|ref|YP_001343223.1| extracellular solute-binding protein [Marinomonas sp. MWYL1] gi|150839312|gb|ABR73288.1| extracellular solute-binding protein family 3 [Marinomonas sp. MWYL1] Length = 341 Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats. Identities = 156/318 (49%), Positives = 221/318 (69%), Gaps = 3/318 (0%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L D+K +GF++CG++TG+ GF+ G+W G DVD CRA++SAIF D K ++ PL+A Sbjct: 26 TLEDVKAKGFVQCGVSTGVPGFSNADDKGNWTGLDVDACRAVASAIFGDAQKAKFTPLSA 85 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 KER ALQS +ID+L+RNT WT R+ SLGL F + ++DGQGF++ K G+ S L G Sbjct: 86 KERLTALQSGEIDVLTRNTTWTYTRDASLGLDFTAVNFYDGQGFMVRKDLGVKSAMDLDG 145 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 A++C + GTTTEL +AD+F+ + + Y P+V ++ +E AAY + RCD YT D S L A + Sbjct: 146 ATVCTEQGTTTELNMADFFRKNKLSYVPVVVQKADEALAAYDSGRCDVYTTDKSGLAAHR 205 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 PS HVILP+ ISK PLAP + GD +W +IV+W + V AEE+GIT KN+ ++ Sbjct: 206 TKLADPSAHVILPETISKEPLAPVVRHGDNQWKDIVTWALFVQVNAEEMGITSKNVAKIK 265 Query: 266 KDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRG 325 +T +P ++R LG++ ++G LGL DW Y II +GNYGE+F+RN+G + L IPRG Sbjct: 266 AETNDPSIKRLLGVEG--DMGSQLGLPADWAYNIIAKVGNYGEVFERNIGPSTPLDIPRG 323 Query: 326 YNALWSK-GGLMYAPPIR 342 NALW++ GG+MYAPP+R Sbjct: 324 LNALWTEAGGIMYAPPVR 341 >gi|38704156|ref|NP_312168.2| periplasmic binding transport protein [Escherichia coli O157:H7 str. Sakai] gi|157159268|ref|YP_001464743.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli E24377A] gi|168752394|ref|ZP_02777416.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC4113] gi|168758500|ref|ZP_02783507.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC4401] gi|168764869|ref|ZP_02789876.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC4501] gi|168769134|ref|ZP_02794141.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC4486] gi|168777686|ref|ZP_02802693.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC4196] gi|168783839|ref|ZP_02808846.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC4076] gi|168786163|ref|ZP_02811170.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC869] gi|168802616|ref|ZP_02827623.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC508] gi|191169153|ref|ZP_03030911.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli B7A] gi|193066465|ref|ZP_03047510.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli E22] gi|194430248|ref|ZP_03062745.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli B171] gi|195940012|ref|ZP_03085394.1| putative periplasmic binding transport protein [Escherichia coli O157:H7 str. EC4024] gi|208807576|ref|ZP_03249913.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC4206] gi|208813206|ref|ZP_03254535.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC4045] gi|208820750|ref|ZP_03261070.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC4042] gi|209397538|ref|YP_002272730.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC4115] gi|217326793|ref|ZP_03442876.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. TW14588] gi|254795210|ref|YP_003080047.1| periplasmic-binding component of an ABC superfamily putative amino acid transporter [Escherichia coli O157:H7 str. TW14359] gi|256018818|ref|ZP_05432683.1| periplasmic-binding component of an ABC superfamily predicted amino acid transporter [Shigella sp. D9] gi|260846073|ref|YP_003223851.1| putative periplasmic binding transport protein [Escherichia coli O103:H2 str. 12009] gi|260857395|ref|YP_003231286.1| putative periplasmic binding transport protein [Escherichia coli O26:H11 str. 11368] gi|260870019|ref|YP_003236421.1| putative periplasmic binding transport protein [Escherichia coli O111:H- str. 11128] gi|261228273|ref|ZP_05942554.1| periplasmic-binding component of an ABC superfamily predicted amino acid transporter [Escherichia coli O157:H7 str. FRIK2000] gi|261255131|ref|ZP_05947664.1| putative periplasmic binding transport protein [Escherichia coli O157:H7 str. FRIK966] gi|291284635|ref|YP_003501453.1| putative amino-acid ABC transporter-binding protein yhdW precursor [Escherichia coli O55:H7 str. CB9615] gi|293406870|ref|ZP_06650796.1| amino acid ABC transporter [Escherichia coli FVEC1412] gi|293412637|ref|ZP_06655360.1| conserved hypothetical protein [Escherichia coli B354] gi|293449591|ref|ZP_06664012.1| amino-acid ABC transporter-binding protein yhdW [Escherichia coli B088] gi|298382611|ref|ZP_06992208.1| amino-acid ABC transporter-binding protein yhdW [Escherichia coli FVEC1302] gi|300898040|ref|ZP_07116411.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 198-1] gi|300904464|ref|ZP_07122310.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 84-1] gi|300925986|ref|ZP_07141809.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 182-1] gi|301304263|ref|ZP_07210377.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 124-1] gi|301326288|ref|ZP_07219661.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 78-1] gi|307314974|ref|ZP_07594562.1| extracellular solute-binding protein family 3 [Escherichia coli W] gi|309793849|ref|ZP_07688275.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 145-7] gi|13959662|sp|P58068|YHDW_ECO57 RecName: Full=Putative amino-acid ABC transporter-binding protein yhdW; Flags: Precursor gi|157081298|gb|ABV21006.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli E24377A] gi|187767128|gb|EDU30972.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC4196] gi|188013752|gb|EDU51874.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC4113] gi|188998861|gb|EDU67847.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC4076] gi|189354670|gb|EDU73089.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC4401] gi|189361744|gb|EDU80163.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC4486] gi|189365193|gb|EDU83609.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC4501] gi|189373879|gb|EDU92295.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC869] gi|189375432|gb|EDU93848.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC508] gi|190900795|gb|EDV60586.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli B7A] gi|192925894|gb|EDV80543.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli E22] gi|194411719|gb|EDX28044.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli B171] gi|208727377|gb|EDZ76978.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC4206] gi|208734483|gb|EDZ83170.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC4045] gi|208740873|gb|EDZ88555.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC4042] gi|209158938|gb|ACI36371.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC4115] gi|217319160|gb|EEC27585.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. TW14588] gi|254594610|gb|ACT73971.1| periplasmic-binding component of an ABC superfamily predicted amino acid transporter [Escherichia coli O157:H7 str. TW14359] gi|257756044|dbj|BAI27546.1| putative periplasmic binding transport protein [Escherichia coli O26:H11 str. 11368] gi|257761220|dbj|BAI32717.1| putative periplasmic binding transport protein [Escherichia coli O103:H2 str. 12009] gi|257766375|dbj|BAI37870.1| putative periplasmic binding transport protein [Escherichia coli O111:H- str. 11128] gi|290764508|gb|ADD58469.1| Putative amino-acid ABC transporter-binding protein yhdW precursor [Escherichia coli O55:H7 str. CB9615] gi|291322681|gb|EFE62110.1| amino-acid ABC transporter-binding protein yhdW [Escherichia coli B088] gi|291426876|gb|EFE99908.1| amino acid ABC transporter [Escherichia coli FVEC1412] gi|291469408|gb|EFF11899.1| conserved hypothetical protein [Escherichia coli B354] gi|298277751|gb|EFI19267.1| amino-acid ABC transporter-binding protein yhdW [Escherichia coli FVEC1302] gi|300358259|gb|EFJ74129.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 198-1] gi|300403626|gb|EFJ87164.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 84-1] gi|300417930|gb|EFK01241.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 182-1] gi|300840389|gb|EFK68149.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 124-1] gi|300846989|gb|EFK74749.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 78-1] gi|306905557|gb|EFN36089.1| extracellular solute-binding protein family 3 [Escherichia coli W] gi|308122806|gb|EFO60068.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 145-7] gi|315257196|gb|EFU37164.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 85-1] gi|320181542|gb|EFW56460.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Shigella boydii ATCC 9905] gi|320189617|gb|EFW64276.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Escherichia coli O157:H7 str. EC1212] gi|320639914|gb|EFX09505.1| putative amino-acid ABC transporter-binding protein yhdW precursor [Escherichia coli O157:H7 str. G5101] gi|320645630|gb|EFX14639.1| putative amino-acid ABC transporter-binding protein yhdW precursor [Escherichia coli O157:H- str. 493-89] gi|320650940|gb|EFX19397.1| putative amino-acid ABC transporter-binding protein yhdW precursor [Escherichia coli O157:H- str. H 2687] gi|320656321|gb|EFX24233.1| putative amino-acid ABC transporter-binding protein yhdW precursor [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320662011|gb|EFX29419.1| putative amino-acid ABC transporter-binding protein yhdW precursor [Escherichia coli O55:H7 str. USDA 5905] gi|320666847|gb|EFX33826.1| putative amino-acid ABC transporter-binding protein yhdW precursor [Escherichia coli O157:H7 str. LSU-61] gi|323154488|gb|EFZ40689.1| general L-amino acid-binding periplasmic protein aapJ [Escherichia coli EPECa14] gi|323162953|gb|EFZ48788.1| general L-amino acid-binding periplasmic protein aapJ [Escherichia coli E128010] gi|323173472|gb|EFZ59101.1| general L-amino acid-binding periplasmic protein aapJ [Escherichia coli LT-68] gi|323178551|gb|EFZ64127.1| general L-amino acid-binding periplasmic protein aapJ [Escherichia coli 1180] gi|323183028|gb|EFZ68427.1| general L-amino acid-binding periplasmic protein aapJ [Escherichia coli 1357] gi|323376846|gb|ADX49114.1| extracellular solute-binding protein family 3 [Escherichia coli KO11] gi|323946885|gb|EGB42901.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli H120] gi|324009098|gb|EGB78317.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 57-2] gi|324020751|gb|EGB89970.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 117-3] gi|324119448|gb|EGC13331.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli E1167] gi|326337965|gb|EGD61799.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Escherichia coli O157:H7 str. 1125] gi|326347534|gb|EGD71259.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Escherichia coli O157:H7 str. 1044] gi|332086450|gb|EGI91597.1| general L-amino acid-binding periplasmic protein aapJ [Shigella dysenteriae 155-74] gi|332087261|gb|EGI92394.1| general L-amino acid-binding periplasmic protein aapJ [Shigella boydii 5216-82] gi|332102250|gb|EGJ05596.1| amino acid ABC transporter [Shigella sp. D9] Length = 341 Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats. Identities = 157/343 (45%), Positives = 233/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K ++ +L + +A + L ++K+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +G+AF Sbjct: 61 DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + +GD EW++ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GI +N+++ + + PD+ LG + + G+ L L W Y I Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKEG--DYGKDLKLDNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341 >gi|293416693|ref|ZP_06659332.1| general L-amino acid transport system substrate-binding protein [Escherichia coli B185] gi|291432049|gb|EFF05032.1| general L-amino acid transport system substrate-binding protein [Escherichia coli B185] Length = 341 Score = 432 bits (1110), Expect = e-119, Method: Composition-based stats. Identities = 157/343 (45%), Positives = 233/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K ++ +L + +A + L ++K+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKMMIDTLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +G+AF Sbjct: 61 DVDICRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + +GD EW++ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GI +N+++ + + PD+ LG + + G+ L L W Y I Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKEG--DYGKDLKLDNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341 >gi|312115908|ref|YP_004013504.1| extracellular solute-binding protein family 3 [Rhodomicrobium vannielii ATCC 17100] gi|311221037|gb|ADP72405.1| extracellular solute-binding protein family 3 [Rhodomicrobium vannielii ATCC 17100] Length = 338 Score = 432 bits (1110), Expect = e-119, Method: Composition-based stats. Identities = 164/342 (47%), Positives = 235/342 (68%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + ++ C + L A L D+K RG L CG+ GL GF+ A+G+W G D Sbjct: 1 MKR--YGTLYCALALMLFCAGARAGTLDDVKARGKLNCGVTQGLAGFSSADASGNWAGLD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDFCRA+++AIFDDPSK+ ++PL++K+RF ALQS +ID+LSR + WT+ + +LG++F Sbjct: 59 VDFCRAVAAAIFDDPSKVNFVPLSSKQRFTALQSGEIDVLSRVSTWTMQNDTALGISFVG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y DGQG ++ KK + S +LSGA +C GTTTEL +AD+F++ +M Y + FE+ + Sbjct: 119 VIYHDGQGLMVRKKLEVQSALELSGAEVCTNTGTTTELNIADFFRSRSMPYRIVAFEKSD 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E AY A RCD Y+ D S+L A ++ +P EHVILPD+ISK PLAPA+ Q D +W ++ Sbjct: 179 EALKAYEAERCDVYSTDASSLSAQRVKLAQPDEHVILPDLISKEPLAPAVRQNDPQWESL 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +A++ AEEL +T+ N +++S+ P V+R LG + + G ALGL KDW + I Sbjct: 239 VRWTLFALINAEELAVTKANADKLSRTDAAPGVRRLLGAES--DYGRALGLDKDWALKAI 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 R +GNYGE+FDRNLG QS LKI RG N LW+ GG+++APP+R Sbjct: 297 RAVGNYGEIFDRNLGQQSPLKIERGLNKLWNNGGILFAPPVR 338 >gi|331664877|ref|ZP_08365782.1| putative amino-acid ABC transporter-binding protein YhdW [Escherichia coli TA143] gi|331058125|gb|EGI30107.1| putative amino-acid ABC transporter-binding protein YhdW [Escherichia coli TA143] Length = 341 Score = 432 bits (1110), Expect = e-119, Method: Composition-based stats. Identities = 157/343 (45%), Positives = 232/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K ++ +L + +A + L ++K+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +G+AF Sbjct: 61 DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + +GD EW++ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GI +N+++ + PD+ LG + + G+ L L W Y I Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKEANPATPDMAHLLGKEG--DYGKDLKLDNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341 >gi|194435095|ref|ZP_03067332.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Shigella dysenteriae 1012] gi|194416657|gb|EDX32789.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Shigella dysenteriae 1012] Length = 341 Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats. Identities = 157/343 (45%), Positives = 233/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K ++ +L + +A + L ++K+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +G+AF Sbjct: 61 DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + +GD EW++ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GI +N+++ + + PD+ LG + + G+ L L W Y I Sbjct: 241 IVRWTLFAMLNAEEMGIDSQNVDEKAANPATPDMAHLLGKEG--DYGKDLKLDNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341 >gi|87121084|ref|ZP_01076975.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Marinomonas sp. MED121] gi|86163576|gb|EAQ64850.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Marinomonas sp. MED121] Length = 340 Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats. Identities = 150/342 (43%), Positives = 224/342 (65%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + I + S A L D+K +GF++CG++ G+ GF+ +NG+W G D Sbjct: 1 MKSNVGKLISTAAVALTVSAGATAGTLDDVKAKGFIQCGVSQGVPGFSNADSNGNWTGID 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD CRA ++A+F D K+++ PL+AKERF ALQS +ID+LSRNT WT R+ SLGL F Sbjct: 61 VDACRAAAAAVFGDAQKVKFTPLSAKERFTALQSGEIDVLSRNTTWTYTRDTSLGLDFTA 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + ++DGQGF++ K G+ S +L GA++C + GTTTEL +AD+F+ H ++Y P+V ++ + Sbjct: 121 VNFYDGQGFMVRKDLGVDSALELDGATVCTEQGTTTELNMADFFRKHQLEYVPVVVQKAD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E AAY + RCD +T D S L A + S HVIL + ISK PL P + GD +W +I Sbjct: 181 EALAAYASGRCDVFTTDKSGLAAHRSKLADSSAHVILDETISKEPLGPVVRHGDNQWKDI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V+W + V AEE+GI+ N+ ++ +T +P ++R LG + ++G L L DW Y +I Sbjct: 241 VTWAMFVQVNAEEMGISSSNVAKIKAETKDPGIRRLLGAEG--DMGAQLSLPADWAYNVI 298 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGE+F+RN+G + + +PRG N LW++GG+MYAPP+R Sbjct: 299 AQVGNYGEVFERNVGPSTPVGLPRGINKLWTEGGVMYAPPVR 340 >gi|301022227|ref|ZP_07186142.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 69-1] gi|331674783|ref|ZP_08375542.1| putative amino-acid ABC transporter-binding protein YhdW [Escherichia coli TA280] gi|284923282|emb|CBG36376.1| Putative ABC transporter, substrate-binding protein [Escherichia coli 042] gi|300397640|gb|EFJ81178.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 69-1] gi|323966446|gb|EGB61880.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli M863] gi|323979012|gb|EGB74090.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli TW10509] gi|324115128|gb|EGC09092.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia fergusonii B253] gi|327251362|gb|EGE63051.1| general L-amino acid-binding periplasmic protein aapJ [Escherichia coli STEC_7v] gi|331068222|gb|EGI39618.1| putative amino-acid ABC transporter-binding protein YhdW [Escherichia coli TA280] Length = 341 Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats. Identities = 156/343 (45%), Positives = 233/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K ++ +L + +A + L ++K+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +G+AF Sbjct: 61 DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + +GD EW++ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+G+ +N+++ + + PD+ LG + + G+ L L W Y I Sbjct: 241 IVRWTLFAMLNAEEMGVNSQNVDEKAANPATPDMAHLLGKEG--DYGKDLKLDNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341 >gi|320202178|gb|EFW76753.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Escherichia coli EC4100B] Length = 341 Score = 431 bits (1108), Expect = e-119, Method: Composition-based stats. Identities = 157/343 (45%), Positives = 233/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K ++ +L + +A + L ++K+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +G+AF Sbjct: 61 DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + +GD EW++ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GI +N+++ + + PD+ LG + + G+ L L W Y I Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMTHLLGKEG--DYGKDLKLDNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341 >gi|147674492|ref|YP_001216921.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae O395] gi|262169332|ref|ZP_06037024.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae RC27] gi|146316375|gb|ABQ20914.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae O395] gi|227013279|gb|ACP09489.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae O395] gi|262022145|gb|EEY40854.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae RC27] Length = 342 Score = 431 bits (1108), Expect = e-119, Method: Composition-based stats. Identities = 162/318 (50%), Positives = 226/318 (71%), Gaps = 3/318 (0%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L + +GF+ CG++TGL GF+ A G+W+G DV++C+A+++A+ D +K++++PL Sbjct: 28 STLDKVLSQGFITCGVSTGLPGFSNPNAKGEWEGIDVEYCQAMAAAVLGDKTKVKFVPLT 87 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 AKERF ALQS +ID+LSRNT WTL R+ +LGL F + Y+DGQGF++ K G+ S +L+ Sbjct: 88 AKERFTALQSGEIDVLSRNTTWTLQRDSALGLNFVGVNYYDGQGFMVKKDLGVKSAKELN 147 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 GAS+CVQ+GTTTEL LADYF+ M Y P+VF+ + + A RCD T D S LYAL Sbjct: 148 GASVCVQSGTTTELNLADYFRNSGMTYKPVVFDTAAQTSKGFDAGRCDVLTTDQSGLYAL 207 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 +L ++P V+LP+IISK PL P + Q D +W+N+ W YAMV AEE GIT KN++++ Sbjct: 208 RLNLEKPDSAVVLPEIISKEPLGPVVRQDDDKWFNVAKWVLYAMVNAEEYGITSKNVDEM 267 Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324 K + NP+V+R LG+D G LG+ D +Y+I++ +GNYGE FDR +G+ S LKI R Sbjct: 268 MK-SDNPEVKRILGLDGPK--GTGLGIRDDCSYQIVKQVGNYGESFDRTVGSGSPLKIDR 324 Query: 325 GYNALWSKGGLMYAPPIR 342 G NALW+ GG MYAPPIR Sbjct: 325 GVNALWNAGGFMYAPPIR 342 >gi|325498846|gb|EGC96705.1| putative amino-acid ABC transporter binding protein yhdW precursor [Escherichia fergusonii ECD227] Length = 341 Score = 431 bits (1108), Expect = e-119, Method: Composition-based stats. Identities = 156/343 (45%), Positives = 233/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K ++ +L + +A + L ++K+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +G+AF Sbjct: 61 DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + +GD EW++ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPTEWIVLPEVISKEPLGPVVRRGDDEWFS 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+G+ +N+++ + + PD+ LG + + G+ L L W Y I Sbjct: 241 IVRWTLFAMLNAEEMGVNSQNVDEKAANPATPDMAHLLGKEG--DYGKDLKLDNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341 >gi|313902268|ref|ZP_07835673.1| extracellular solute-binding protein family 3 [Thermaerobacter subterraneus DSM 13965] gi|313467419|gb|EFR62928.1| extracellular solute-binding protein family 3 [Thermaerobacter subterraneus DSM 13965] Length = 385 Score = 431 bits (1108), Expect = e-119, Method: Composition-based stats. Identities = 138/321 (42%), Positives = 212/321 (66%), Gaps = 3/321 (0%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 S L + RG L CG+N L GF+ + +G GFD DFCRA+++A+FDDP+ +++ Sbjct: 68 AGQSRLQVVLSRGKLICGVNGQLPGFSYLDPSGQMTGFDADFCRAIAAALFDDPNAVEFR 127 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 PL+A+ERF A+QS ++D+L RNT WTL R+ G+ F P T++DG G ++ K + + S++ Sbjct: 128 PLSAQERFTAVQSGEVDVLIRNTTWTLGRDTVNGMEFLPTTFYDGGGVMVRKDRNVKSLA 187 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L GA+ICV +GTT E+ L D +A + P FE +++ A Y + CDA T D S L Sbjct: 188 DLDGATICVLSGTTNEMVLTDRMRALGASFTPKTFEDADQLYATYESGGCDAVTSDKSQL 247 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 + P HVIL +++SK PL PA+ D+ W+++V W +A + AEE GI +N+ Sbjct: 248 AGRRAVLSDPDNHVILDEMLSKEPLGPAVKNNDSTWFDVVKWIVFATIQAEEFGINSQNV 307 Query: 262 NQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELK 321 +Q K++ NPD++RFLG++ +G+ LG++ D+ YR+I+H+GNYGE+++RNLG + K Sbjct: 308 DQF-KNSDNPDIRRFLGVEGE--LGKGLGISNDFAYRVIKHVGNYGEIYERNLGPDTPFK 364 Query: 322 IPRGYNALWSKGGLMYAPPIR 342 + RG N LW+ GGL+Y+PP R Sbjct: 365 LERGLNELWTNGGLLYSPPFR 385 >gi|104783492|ref|YP_609990.1| general amino acid ABC transporter periplasmic binding protein [Pseudomonas entomophila L48] gi|95112479|emb|CAK17206.1| general amino acid ABC transporter, periplasmic binding protein [Pseudomonas entomophila L48] Length = 342 Score = 431 bits (1108), Expect = e-119, Method: Composition-based stats. Identities = 165/342 (48%), Positives = 232/342 (67%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L TSF+ + L +KK+GF++CG++ GL GF+ A G G D Sbjct: 3 MLKTTLAVLTAAAALGATSFAQAGATLDAVKKKGFVQCGVSDGLPGFSVPDAQGKIVGID 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D CRA+++A+F D +K+++ LNAKERF ALQS ++D+LSRNT WT R+ +GL F Sbjct: 63 ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEVDVLSRNTTWTSSRDAGMGLVFAG 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DG GF+ +KK G+SS +L GA+IC+QAGTTTEL ++DYF+A+ +KY PI F+ + Sbjct: 123 VTYYDGVGFLANKKLGVSSAKELDGATICIQAGTTTELNVSDYFRANGLKYTPITFDTSD 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + + RCD T D S L+A + P+E+V+LP+ ISK PL P + +GD EW++I Sbjct: 183 ESAKSLESGRCDVLTSDKSQLFAQRSKLAAPTEYVVLPETISKEPLGPVVRKGDEEWFSI 242 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEE GIT KN+ +K T NPDV R LG D G+ L L KDW +I+ Sbjct: 243 VKWTLFAMLNAEEAGITSKNVEAEAKSTKNPDVARLLGADGE--YGKDLKLPKDWVVQIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F++NLG ++LKI RG NALW+ GG+ YAPP+R Sbjct: 301 KQVGNYGEVFEKNLGQSTDLKIDRGMNALWNNGGIQYAPPVR 342 >gi|193071524|ref|ZP_03052434.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli E110019] gi|192955161|gb|EDV85654.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli E110019] Length = 341 Score = 431 bits (1108), Expect = e-118, Method: Composition-based stats. Identities = 157/343 (45%), Positives = 232/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K ++ +L + +A + L ++K+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +G+AF Sbjct: 61 DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + +GD EW++ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GI +N+++ + + PD+ LG + G+ L L W Y I Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKEGY--YGKDLKLDNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341 >gi|254504024|ref|ZP_05116175.1| lysine-arginine-ornithine-binding periplasmic protein [Labrenzia alexandrii DFL-11] gi|222440095|gb|EEE46774.1| lysine-arginine-ornithine-binding periplasmic protein [Labrenzia alexandrii DFL-11] Length = 325 Score = 430 bits (1107), Expect = e-118, Method: Composition-based stats. Identities = 163/316 (51%), Positives = 228/316 (72%), Gaps = 3/316 (0%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L D+K +GF++CG++ GL GF+ A G+W G DVD CRA+++A+F D S +++ PL+AK Sbjct: 13 LEDVKGKGFIQCGVSQGLPGFSNPDAQGNWTGLDVDLCRAMAAAVFGDASAVKFTPLSAK 72 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 ERF ALQS ++D+LSRNT WT+ R+ LGL F + Y+DGQGF++ K G++S ++SGA Sbjct: 73 ERFTALQSGEVDVLSRNTTWTMSRDTQLGLNFAGVNYYDGQGFMVRKDLGVTSALEMSGA 132 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 S+C GTTTEL +ADYF+A+NM Y + FE+ +E+ AAY A RCD YT D S LYA +L Sbjct: 133 SVCTNTGTTTELNVADYFRANNMPYEIVAFEKADEVVAAYDAGRCDVYTTDASGLYAQRL 192 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 P +H++LP+IISK PL P + QGD EW+NI WT AM+ AEELG+T N++++ K Sbjct: 193 KLTNPGDHMVLPEIISKEPLGPVVRQGDDEWFNIAKWTLNAMINAEELGVTSANVDEM-K 251 Query: 267 DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGY 326 + NP V+R LG + + GEA+GL+ DW Y I++++GNY E F+ N+G + L I RG Sbjct: 252 ASDNPSVKRLLGAEGA--FGEAIGLSNDWAYNIVKNVGNYEESFNANVGPDTPLGISRGV 309 Query: 327 NALWSKGGLMYAPPIR 342 NALWS GG +YAPP+R Sbjct: 310 NALWSNGGFLYAPPVR 325 >gi|91212699|ref|YP_542685.1| putative periplasmic amino-acid ABC transporter binding protein [Escherichia coli UTI89] gi|117625557|ref|YP_858880.1| putative periplasmic amino-acid ABC transporter binding protein [Escherichia coli APEC O1] gi|215488575|ref|YP_002331006.1| predicted periplasmic binding transport protein; periplasmic-binding component of ABC superfamily [Escherichia coli O127:H6 str. E2348/69] gi|237705973|ref|ZP_04536454.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|306816388|ref|ZP_07450520.1| putative periplasmic binding transport protein; periplasmic-binding component of ABC superfamily [Escherichia coli NC101] gi|312968401|ref|ZP_07782610.1| general L-amino acid-binding periplasmic protein aapJ [Escherichia coli 2362-75] gi|331649069|ref|ZP_08350157.1| putative amino-acid ABC transporter-binding protein YhdW [Escherichia coli M605] gi|331659557|ref|ZP_08360499.1| putative amino-acid ABC transporter-binding protein YhdW [Escherichia coli TA206] gi|91074273|gb|ABE09154.1| putative periplasmic amino-acid ABC transporter binding protein [Escherichia coli UTI89] gi|115514681|gb|ABJ02756.1| putative periplasmic amino-acid ABC transporter binding protein [Escherichia coli APEC O1] gi|215266647|emb|CAS11086.1| predicted periplasmic binding transport protein; periplasmic-binding component of ABC superfamily [Escherichia coli O127:H6 str. E2348/69] gi|222034984|emb|CAP77727.1| amino-acid ABC transporter-binding protein yhdW [Escherichia coli LF82] gi|226899013|gb|EEH85272.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|294494121|gb|ADE92877.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli IHE3034] gi|305849953|gb|EFM50412.1| putative periplasmic binding transport protein; periplasmic-binding component of ABC superfamily [Escherichia coli NC101] gi|307625131|gb|ADN69435.1| predicted periplasmic binding transport protein; periplasmic-binding component of ABC superfamily [Escherichia coli UM146] gi|312286619|gb|EFR14530.1| general L-amino acid-binding periplasmic protein aapJ [Escherichia coli 2362-75] gi|312947826|gb|ADR28653.1| predicted periplasmic binding transport protein; periplasmic-binding component of ABC superfamily [Escherichia coli O83:H1 str. NRG 857C] gi|315289024|gb|EFU48422.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 110-3] gi|315300933|gb|EFU60153.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 16-3] gi|320194754|gb|EFW69384.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Escherichia coli WV_060327] gi|323189120|gb|EFZ74404.1| general L-amino acid-binding periplasmic protein aapJ [Escherichia coli RN587/1] gi|323951212|gb|EGB47087.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli H252] gi|323957584|gb|EGB53298.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli H263] gi|330909319|gb|EGH37833.1| glutamate Aspartate periplasmic binding protein precursor GltI [Escherichia coli AA86] gi|331042816|gb|EGI14958.1| putative amino-acid ABC transporter-binding protein YhdW [Escherichia coli M605] gi|331054139|gb|EGI26168.1| putative amino-acid ABC transporter-binding protein YhdW [Escherichia coli TA206] Length = 341 Score = 430 bits (1107), Expect = e-118, Method: Composition-based stats. Identities = 156/343 (45%), Positives = 233/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K ++ +L + +A + L ++K+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +G+AF Sbjct: 61 DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + +GD EW++ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GI +N+++ + + PD+ LG + + G+ L L W + I Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKEG--DYGKDLKLDNKWAFNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341 >gi|13959721|sp|P45766|YHDW_ECOLI RecName: Full=Putative amino-acid ABC transporter-binding protein yhdW; Flags: Precursor Length = 341 Score = 430 bits (1106), Expect = e-118, Method: Composition-based stats. Identities = 157/343 (45%), Positives = 232/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K ++ +L + A + L ++K+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKMMIATLAAASVLLAVANQAXAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +G+AF Sbjct: 61 DVDICRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + +GD EW++ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GI +N+++ + + PD+ LG + + G+ L L W Y I Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKEG--DYGKDLKLDNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341 >gi|326797351|ref|YP_004315171.1| ABC-type transporter periplasmic subunit family 3 [Marinomonas mediterranea MMB-1] gi|326548115|gb|ADZ93335.1| ABC-type transporter, periplasmic subunit family 3 [Marinomonas mediterranea MMB-1] Length = 340 Score = 430 bits (1106), Expect = e-118, Method: Composition-based stats. Identities = 150/342 (43%), Positives = 227/342 (66%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + I S + A+ L D+K +GF++CG++ G+ GF+ G+W G D Sbjct: 1 MKSNMSKILTTAAIAATVSATAGAATLDDVKSKGFIQCGVSQGVPGFSNADEAGNWSGID 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD CRA ++A+F D +++ PL+AKERF ALQS +ID+LSRNT WT R+ +LGL F Sbjct: 61 VDACRAAAAAVFGDAQAVKFTPLSAKERFTALQSGEIDMLSRNTTWTYTRDTALGLDFTA 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + ++DGQGF++ G++S +L GA++C + GTTTEL +AD+F+ H + Y P++ ++ + Sbjct: 121 VNFYDGQGFMVRNDLGVTSAMELDGATVCTEQGTTTELNMADFFRKHGLSYVPVIVQKAD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E AAY + RCD +T D S L A + PS HVILP+ ISK PL P + GD +W +I Sbjct: 181 EALAAYASGRCDVFTTDKSGLAAHRSKLADPSAHVILPETISKEPLGPVVRHGDNQWKDI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V+W + V AEE+GI+ KN+ ++ ++ +P ++R LG + N+GE+LGL DW Y II Sbjct: 241 VTWAMFVQVNAEEMGISSKNVAKIKAESKDPAIRRLLGAEG--NMGESLGLGADWAYDII 298 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGE+F+ N+G + + +PRG N LW++GG+MYAPP+R Sbjct: 299 AEVGNYGEVFENNVGPNTPVGLPRGINNLWTEGGVMYAPPVR 340 >gi|262274329|ref|ZP_06052140.1| amino acid ABC transporter amino acid-binding protein [Grimontia hollisae CIP 101886] gi|262220892|gb|EEY72206.1| amino acid ABC transporter amino acid-binding protein [Grimontia hollisae CIP 101886] Length = 381 Score = 430 bits (1106), Expect = e-118, Method: Composition-based stats. Identities = 154/327 (47%), Positives = 221/327 (67%), Gaps = 3/327 (0%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 + + L +KK G + CG+ TGL GF+ +NG W+G DV+FC+A+++A+ D Sbjct: 58 APAPSAQGENTLEKVKKSGVISCGVGTGLPGFSNPNSNGAWEGIDVEFCQAMAAAVLGDK 117 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 K++Y+PL AKERF ALQS +IDILSRNT WTL R+ +LGL F + Y+DGQGF++ K Sbjct: 118 DKVKYVPLTAKERFTALQSGEIDILSRNTTWTLQRDGTLGLNFVGVNYYDGQGFMVKKDL 177 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 G+ S +L GAS+CVQ+GTTTEL L+DYF+++ M + P+V++ + + + RCD T Sbjct: 178 GVKSALELDGASVCVQSGTTTELNLSDYFRSNGMSFKPVVYDTYDATVKGFESGRCDTLT 237 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D S LYA ++ P V+LP+IISK PL P + QGD W+NI WT M+ EE G Sbjct: 238 TDQSGLYASRIKLADPDSAVVLPEIISKEPLGPVVRQGDDNWFNIAKWTLNTMINGEEFG 297 Query: 256 ITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLG 315 IT N++++ ++ +P+++R LG D G+ LGL DW Y++I+ +GNYGE F R +G Sbjct: 298 ITSANVDEMV-NSKDPNIRRILGQDGPK--GKGLGLNDDWGYQVIKQVGNYGESFQRTVG 354 Query: 316 NQSELKIPRGYNALWSKGGLMYAPPIR 342 + S L+I RG NALWS+GG++YAPPIR Sbjct: 355 SGSPLQISRGVNALWSEGGILYAPPIR 381 >gi|26249860|ref|NP_755900.1| putative amino-acid ABC transporter binding protein yhdW [Escherichia coli CFT073] gi|110643514|ref|YP_671244.1| putative amino-acid ABC transporter binding protein YhdW precursor [Escherichia coli 536] gi|191173851|ref|ZP_03035372.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli F11] gi|227887996|ref|ZP_04005801.1| amino-acid ABC superfamily ATP binding cassette transporter binding protein yhdW precursor [Escherichia coli 83972] gi|300979705|ref|ZP_07174655.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 200-1] gi|300991067|ref|ZP_07179488.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 45-1] gi|301047875|ref|ZP_07194922.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 185-1] gi|26110288|gb|AAN82474.1|AE016767_234 Putative amino-acid ABC transporter binding protein yhdW precursor [Escherichia coli CFT073] gi|110345106|gb|ABG71343.1| putative amino-acid ABC transporter binding protein YhdW precursor [Escherichia coli 536] gi|190905901|gb|EDV65519.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli F11] gi|227835392|gb|EEJ45858.1| amino-acid ABC superfamily ATP binding cassette transporter binding protein yhdW precursor [Escherichia coli 83972] gi|300300218|gb|EFJ56603.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 185-1] gi|300307923|gb|EFJ62443.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 200-1] gi|300406988|gb|EFJ90526.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 45-1] gi|307555363|gb|ADN48138.1| putative periplasmic amino-acid ABC transporter binding protein [Escherichia coli ABU 83972] gi|315294821|gb|EFU54164.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 153-1] gi|324015878|gb|EGB85097.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 60-1] Length = 341 Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats. Identities = 156/343 (45%), Positives = 233/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K ++ +L + +A + L ++K+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +G+AF Sbjct: 61 DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + +GD EW++ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPTEWIVLPEVISKEPLGPVVRRGDDEWFS 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GI +N+++ + + PD+ LG + + G+ L L W + I Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKEG--DYGKDLKLDNKWAFNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341 >gi|322834718|ref|YP_004214745.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602] gi|321169919|gb|ADW75618.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602] Length = 341 Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats. Identities = 156/343 (45%), Positives = 229/343 (66%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K +++ + +A L +KK+GF++CGI+ GL GF+ + G + G Sbjct: 1 MKKILLSTLIAAASFVTLAGQAHAGTTLDAVKKKGFVQCGISDGLPGFSYADSKGKFTGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CRA+++A+F D K++Y PL AKERF ALQS ++DILSRNT WT R+ +G+ F Sbjct: 61 DVDVCRAVAAAVFGDAEKVKYTPLTAKERFTALQSGEVDILSRNTTWTSSRDAGMGMIFA 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Y+DG GF+ H+K G+ S +L GA++C+QAGT TEL +ADYFKA+ M Y P+ F+R Sbjct: 121 GVNYYDGIGFLTHQKAGLKSAKELDGATVCLQAGTDTELNVADYFKANKMTYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ +P E ++LP++ISK PL P + +GD +W Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDEFIVLPEVISKEPLGPVVRRGDEDWLA 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV W+ +AM+ AEE+G+T +N+++++ + T PD+ LG K+ G L + DW +I Sbjct: 241 IVRWSLFAMLNAEEMGVTSQNVDKLAANPTTPDMSNLLG--KTGTYGADLKVPNDWVVKI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++ +GNYGE F+RN+G SELKI RG NALW+KGG+ YAPP+R Sbjct: 299 VKQVGNYGESFERNVGQGSELKIKRGQNALWNKGGIQYAPPVR 341 >gi|77457200|ref|YP_346705.1| extracellular solute-binding protein [Pseudomonas fluorescens Pf0-1] gi|77381203|gb|ABA72716.1| amino acid ABC transporter substrate-binding protein, PAAT family [Pseudomonas fluorescens Pf0-1] Length = 343 Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats. Identities = 156/343 (45%), Positives = 222/343 (64%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + +L + F+ + L +KK+GF++CG++ GL GF+ + G G D Sbjct: 3 MLKSTLAIVTAAAVLGVSGFAQAGATLDAVKKKGFVQCGVSDGLPGFSVPDSTGKIVGID 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D CRA+++A+F D +K+++ LNAKERF ALQS +IDILSRNT T R+ +GL F Sbjct: 63 ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTMTSSRDAGMGLKFPG 122 Query: 121 -ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 ITY+DG GF+++ K G+ S +L GA+IC+QAGTTTEL ++DYF+ + +KY PI F+ Sbjct: 123 FITYYDGIGFLVNNKLGVKSAKELDGATICIQAGTTTELNVSDYFRGNGLKYTPITFDTS 182 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E + + RCD T D S L+A + P ++V+LP+ ISK PL P + GD EW Sbjct: 183 DESAKSLESGRCDVLTSDKSQLFAQRSKLASPKDYVVLPETISKEPLGPVVRNGDDEWLA 242 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV W YA++ EE GI+ KN+ +K T NPDV R LG D G+ L L KDW +I Sbjct: 243 IVRWVGYALLNTEEAGISSKNVEAEAKSTKNPDVARMLGADGE--YGKDLKLPKDWVVQI 300 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++ +GNYGE+F++NLG + L+I RG NALW+ GG+ YAPP+R Sbjct: 301 VKQVGNYGEIFEKNLGKSTPLEIDRGLNALWNNGGIQYAPPVR 343 >gi|239832600|ref|ZP_04680929.1| amino-acid ABC transporter-binding protein yhdW precursor [Ochrobactrum intermedium LMG 3301] gi|239824867|gb|EEQ96435.1| amino-acid ABC transporter-binding protein yhdW precursor [Ochrobactrum intermedium LMG 3301] Length = 339 Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats. Identities = 161/342 (47%), Positives = 222/342 (64%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M S+L A L +K+RG L CG++ G+ GF+ G W GFD Sbjct: 1 MKNILLGSLLAAGFALSAQGGAQADTLSTVKERGKLNCGVSQGVAGFSSPDDQGKWTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS +D+LSR T WTL R+ +G+ F Sbjct: 61 IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGILFVG 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+DGQGF++ K G+ S +L GAS+C + GTTTE ADYF A+N+KY P+V + + Sbjct: 121 TAYYDGQGFLIRKDLGVDSALKLDGASVCTEQGTTTEQNAADYFSANNIKYEPVVIDSAD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 I A+ RCD YT D SALYA +L P +LP++ISK PL PA+ QGD +W+N+ Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPDAFTVLPEVISKEPLGPAVRQGDDKWFNV 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +A++ AEELG+TQ + + ++ PDV+RFLG + + G+ LGL W Y ++ Sbjct: 241 VRWTLFALLEAEELGVTQASA-EADLNSKKPDVRRFLGSEG--DGGQQLGLEPKWAYNVV 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGEMF+R +G S LKI RG NALW+KGGLMYAPP++ Sbjct: 298 STIGNYGEMFERTIGKGSLLKIDRGLNALWNKGGLMYAPPVK 339 >gi|313500474|gb|ADR61840.1| AapJ [Pseudomonas putida BIRD-1] Length = 342 Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats. Identities = 161/342 (47%), Positives = 231/342 (67%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L S + + L +KK+GF++CG++ GL GF+ A G G D Sbjct: 3 MLKTTLAVLTAAAALGAVSTAQAGATLDAVKKKGFVQCGVSDGLPGFSVPDAQGKIVGID 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D CRA+++A+F D +K+++ LNAKERF ALQS ++D+LSRNT WT R+ +GL F Sbjct: 63 ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEVDVLSRNTTWTSSRDAGMGLVFAG 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DG GF+++KK G+SS +L GA+IC+QAGTTTEL ++D+F+A+ +KY PI F+ + Sbjct: 123 VTYYDGVGFLVNKKLGVSSAKELDGATICIQAGTTTELNVSDFFRANGLKYTPITFDTSD 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + + RCD T D S L+A + P+++V+LP+ ISK PL P + +GD EW++I Sbjct: 183 ESAKSLESGRCDVLTSDKSQLFAQRSKLAAPTDYVVLPETISKEPLGPVVRKGDEEWFSI 242 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEE GIT KN+ +K T NPDV R LG D G+ L L KDW +I+ Sbjct: 243 VKWTLFAMLNAEEAGITSKNVEAEAKATKNPDVARLLGADGE--YGKDLKLPKDWVVQIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F++NLG ++LKI RG NALW+ GG+ YAPP+R Sbjct: 301 KQVGNYGEVFEKNLGQSTDLKIDRGMNALWNNGGIQYAPPVR 342 >gi|229523536|ref|ZP_04412941.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae bv. albensis VL426] gi|229337117|gb|EEO02134.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae bv. albensis VL426] Length = 342 Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats. Identities = 162/318 (50%), Positives = 223/318 (70%), Gaps = 3/318 (0%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L + +GF+ CG++TGL GF+ A G+W+G DV++C+A+++A+ D +K++++PL Sbjct: 28 STLDKVLSQGFITCGVSTGLPGFSNPNAKGEWEGIDVEYCQAMAAAVLGDKTKVKFVPLT 87 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 AKERF ALQS +ID+LSRNT WTL R+ +LG F + Y+DGQGF++ K G+ S +L+ Sbjct: 88 AKERFTALQSGEIDVLSRNTTWTLQRDSALGRNFVGVNYYDGQGFMVKKDLGVKSAKELN 147 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 GAS+CVQ+GTTTEL LADYF+ M Y P+VF+ + + A RCD T D S LYAL Sbjct: 148 GASVCVQSGTTTELNLADYFRNSGMTYKPVVFDTAAQTSKGFDAGRCDVLTTDQSGLYAL 207 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 +L ++P V+LP+IISK PL P + Q D +W+N+ W YAMV AEE GIT KN++++ Sbjct: 208 RLNLEKPDSAVVLPEIISKEPLGPVVRQDDDKWFNVAKWVLYAMVNAEEYGITSKNVDEM 267 Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324 K + NP+V R LG D G LG+ DW+Y+I++ +GNYGE FDR +G S LKI R Sbjct: 268 MK-SDNPEVMRILGRDGPK--GTGLGIRDDWSYQIVKQVGNYGESFDRTVGAGSPLKIDR 324 Query: 325 GYNALWSKGGLMYAPPIR 342 G NALW+ GG MYAPPIR Sbjct: 325 GVNALWNAGGFMYAPPIR 342 >gi|26988032|ref|NP_743457.1| general amino acid ABC transporter, periplasmic binding protein [Pseudomonas putida KT2440] gi|24982752|gb|AAN66921.1|AE016320_9 general amino acid ABC transporter, periplasmic binding protein [Pseudomonas putida KT2440] Length = 342 Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats. Identities = 162/342 (47%), Positives = 231/342 (67%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L S + + L +KK+GF++CG++ GL GF+ A G G D Sbjct: 3 MLKTTLAVLTAAAALGAVSTAQAGATLDAVKKKGFVQCGVSDGLPGFSVPDAQGKIVGID 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D CRA+++A+F D +K+++ LNAKERF ALQS ++D+LSRNT WT R+ +GL F Sbjct: 63 ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEVDVLSRNTTWTSSRDAGMGLVFAG 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DG GF+++KK G+SS +L GA+IC+QAGTTTEL ++D+F+A+ +KY PI F+ + Sbjct: 123 VTYYDGVGFLVNKKLGVSSAKELDGATICIQAGTTTELNVSDFFRANGLKYTPITFDTSD 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + + RCD T D S L+A + P+E+V+LP+ ISK PL P + +GD EW++I Sbjct: 183 ESAKSLESGRCDVLTSDKSQLFAQRSKLAAPTEYVVLPETISKEPLGPVVRKGDEEWFSI 242 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEE GIT KN+ +K T NPDV R LG D G+ L L KDW +I+ Sbjct: 243 VKWTLFAMLNAEEAGITSKNVEAEAKATKNPDVARLLGADGE--YGKDLKLPKDWVVQIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F++NLG ++LKI RG NALW+ GG+ YAPP+R Sbjct: 301 KQVGNYGEVFEKNLGQSTDLKIDRGMNALWNNGGIQYAPPVR 342 >gi|126736638|ref|ZP_01752378.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Roseobacter sp. CCS2] gi|126713951|gb|EBA10822.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Roseobacter sp. CCS2] Length = 339 Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats. Identities = 152/343 (44%), Positives = 217/343 (63%), Gaps = 5/343 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F L + F + +A+ L D+K+RG L CG+ TGLVGFA ANG W GFD Sbjct: 1 MKKTAFYGALTVA--GFAASMASAATLDDVKERGVLNCGVTTGLVGFASPDANGVWDGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ D ++++P K RF AL S +ID+L+RNT WT R++ L F Sbjct: 59 VGVCRAVAAAVLGDSDAVEFVPTTGKTRFTALASGEIDMLARNTTWTFSRDVDLKFEFVG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 I Y+DGQGF++ + G+SS +L GA++C+Q GTTTEL LADYF+++N+ Y P+ E Sbjct: 119 INYYDGQGFLVPRDLGVSSAKELDGATVCIQTGTTTELNLADYFRSNNISYEPVPIETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT D S L A + + P++HV+LP+I+SK PL P + GD +W ++ Sbjct: 179 EGQQQYLAGACDVYTTDASGLAATRAAFENPADHVVLPEIVSKEPLGPLVRHGDNDWADV 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTT-NPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 V W+ A++ AEELG+T NI +++ T NP+V R LG + +G LGL DW Sbjct: 239 VRWSLNALIAAEELGVTSANIEELAAAPTGNPEVNRLLGTEGE--LGAMLGLEADWAKNA 296 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I GNYGE+F++N+G + + + RG NA W+ GGL+Y+PP R Sbjct: 297 IAAGGNYGELFEKNIGENTPIGLARGLNAQWTDGGLLYSPPFR 339 >gi|307300514|ref|ZP_07580294.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti BL225C] gi|307318379|ref|ZP_07597814.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti AK83] gi|306896061|gb|EFN26812.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti AK83] gi|306904680|gb|EFN35264.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti BL225C] Length = 336 Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats. Identities = 155/334 (46%), Positives = 229/334 (68%), Gaps = 3/334 (0%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 + F + A+ L +K+RG L+CG++ G++GF+ G+W GFD+DFCRA++ Sbjct: 6 LALFATAFLAGTTAQAATLDVVKQRGELRCGVSQGVLGFSAPDDKGEWSGFDIDFCRAVA 65 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 +A P K++Y+PL+ KERF ALQS ++D+LSR T WTL R+ LG++F + Y+DGQ Sbjct: 66 AATLGSPDKVKYVPLSTKERFTALQSGEVDLLSRQTTWTLSRDTDLGMSFVGVNYYDGQA 125 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 F++ G+ SV +LSGAS+C + GTTTE +ADYF A+ ++Y I FE+ ++ A+ + Sbjct: 126 FMVRGDIGVKSVKELSGASVCTETGTTTEQNMADYFSANKIEYQVIAFEKADQTIQAFNS 185 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 RCD Y+ D SALY+ +LT + P V+LP++ISK PL PA+ QGD +W+ +V WT +AM Sbjct: 186 GRCDVYSTDASALYSQRLTLNDPDRFVVLPEVISKEPLGPAVRQGDDQWFKVVRWTLFAM 245 Query: 249 VTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGE 308 + AEELGIT++N + + T +RFLGID + G+ALGL W Y+ + +GNYGE Sbjct: 246 IEAEELGITRENAASLLESGTAAQ-KRFLGID--NEAGKALGLDPKWAYQTVAAVGNYGE 302 Query: 309 MFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +F+R+LG +S L+I RG N LW+ GGL+YAPP+R Sbjct: 303 IFERHLGKESALRIDRGLNKLWNNGGLIYAPPVR 336 >gi|119383545|ref|YP_914601.1| cationic amino acid ABC transporter, periplasmic binding protein [Paracoccus denitrificans PD1222] gi|119373312|gb|ABL68905.1| L-aspartate-binding protein / L-glutamate-binding protein / L-glutamine-binding protein / L-asparagine-binding protein [Paracoccus denitrificans PD1222] Length = 341 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 159/343 (46%), Positives = 226/343 (65%), Gaps = 3/343 (0%) Query: 1 MYKD-FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K FF S+ + + + + L ++K RG L CG+NTGL+GFA ANG+W GF Sbjct: 1 MKKSVFFGSVTAVALAASGALAAEGDTLKEVKARGVLNCGVNTGLIGFAAPDANGNWSGF 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DV FC+A+++A+ D +KI+Y+P + RF AL S ++D+L+RN+ WT R+ L L F Sbjct: 61 DVAFCKAMAAAVLGDATKIKYVPTTGQTRFTALSSGEVDLLARNSTWTFQRDTDLKLDFI 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Y+DGQGF++ K G+SS +L+GA+IC+Q GTTTEL LADYFKA+NM Y P+ + Sbjct: 121 GVNYYDGQGFMVRKDLGVSSAKELNGATICIQTGTTTELNLADYFKANNMDYQPVNIDSN 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E + Y A CDAYT D S L A + + P H+ILP+IISK PL PA+ GD W + Sbjct: 181 AEGEQQYMAGACDAYTTDASGLAATRASFADPENHIILPEIISKEPLGPAVRHGDNNWGD 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 I WT YA++ AEE G+T NI++++K + NP+VQR LG + ++G+ +GL +W R Sbjct: 241 IARWTLYALIAAEEYGVTSANIDELAKSSQNPEVQRLLGT--TDDLGKMIGLDAEWAKRA 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ GNYGE+F +G Q+ + + RG NA W++GGLMYA P R Sbjct: 299 IKAGGNYGEIFAATIGEQTPIGLARGLNAQWTQGGLMYAMPFR 341 >gi|167035543|ref|YP_001670774.1| extracellular solute-binding protein [Pseudomonas putida GB-1] gi|166862031|gb|ABZ00439.1| extracellular solute-binding protein family 3 [Pseudomonas putida GB-1] Length = 342 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 162/342 (47%), Positives = 232/342 (67%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L S + + L +KK+GF++CG++ GL GF+ A G G D Sbjct: 3 MLKTTLAVLTAAAALGAVSNAQAGATLDAVKKKGFVQCGVSDGLPGFSVPDAQGKIVGID 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D CRA+++A+F D +K+++ LNAKERF ALQS ++D+LSRNT WT R+ +GL F Sbjct: 63 ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEVDVLSRNTTWTSSRDAGMGLVFAG 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DG GF+++KK G+SS +L GA+IC+QAGTTTEL ++D+F+A+N+KY PI F+ + Sbjct: 123 VTYYDGVGFLVNKKLGVSSAKELDGATICIQAGTTTELNVSDFFRANNLKYTPITFDTSD 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + + RCD T D S L+A + P+++V+LP+ ISK PL P + +GD EW++I Sbjct: 183 ESAKSLESGRCDVLTSDKSQLFAQRSKLAAPTDYVVLPETISKEPLGPVVRKGDEEWFSI 242 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEE GIT KN+ +K T NPDV R LG D G+ L L KDW +I+ Sbjct: 243 VKWTLFAMLNAEEAGITSKNVEAEAKATKNPDVARLLGGDGE--YGKDLKLPKDWVVQIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F++NLG ++LKI RG NALW+ GG+ YAPP+R Sbjct: 301 KQVGNYGEVFEKNLGQSTDLKIDRGMNALWNNGGIQYAPPVR 342 >gi|17988694|ref|NP_541327.1| general L-amino acid-binding periplasmic protein AAPJ precursor [Brucella melitensis bv. 1 str. 16M] gi|17984503|gb|AAL53591.1| general l-amino acid-binding periplasmic protein aapj precursor [Brucella melitensis bv. 1 str. 16M] Length = 331 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 164/334 (49%), Positives = 223/334 (66%), Gaps = 3/334 (0%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 +L A L +K+RG + CG++ G+ GF+ G W GFD+DFCRA+S Sbjct: 1 MLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDQGKWTGFDIDFCRAVS 60 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 +A+F DP K+ ++PL+ KERF ALQS +D+LSR T WTL R+ +G+ F Y+DGQG Sbjct: 61 AAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVGTAYYDGQG 120 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 F++ K G+ S +L GASIC + GTTTE +ADYF AHN+KY P+V + + I A+ Sbjct: 121 FMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSADGILKAFET 180 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 RCD YT D SALYA +L P +++LP++ISK PL PA+ QGD +W+NIV WT +A+ Sbjct: 181 GRCDVYTTDASALYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNIVRWTLFAL 240 Query: 249 VTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGE 308 + AEELGITQK + D+ PD++RFLG + + G+ LGL W Y I+ +GNYGE Sbjct: 241 LEAEELGITQKTV-AADLDSRKPDIRRFLGSEG--DNGQQLGLEPKWAYNIVASVGNYGE 297 Query: 309 MFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 MF+R +G S LKI RG NALW+KGGLMYAPP++ Sbjct: 298 MFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 331 >gi|90409066|ref|ZP_01217191.1| general L-amino acid-binding protein [Psychromonas sp. CNPT3] gi|90309823|gb|EAS37983.1| general L-amino acid-binding protein [Psychromonas sp. CNPT3] Length = 337 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 159/339 (46%), Positives = 223/339 (65%), Gaps = 3/339 (0%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 L + +A L + K G L CG++TG+ GF+ + G WKG DVDF Sbjct: 2 KVIKIALLFSVASLVPQLASADTLAKVLKNGTLHCGVSTGIPGFSATDSKGVWKGIDVDF 61 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 CR+++SA+ D SK++Y+PL AKERF ALQS +ID+L R++ WT R+ SLGL F + Y Sbjct: 62 CRSVASAVLGDASKVKYIPLTAKERFTALQSGEIDVLVRSSTWTATRDTSLGLNFAGVNY 121 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 +DGQGF++ K ++S L GA+ C+QAGTTTEL L DYFK++NM+Y + ++ + Sbjct: 122 YDGQGFLVKKSLNVNSAKDLDGATFCIQAGTTTELNLTDYFKSNNMQYKAVTYDTSGQTI 181 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 ++ RCDA T D S LY LKL P ++LP+IISK PL P + QGD +W+N+V W Sbjct: 182 DGFKKGRCDAVTSDASQLYGLKLKMKDPQSVMVLPEIISKEPLGPVVRQGDDKWFNVVRW 241 Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHM 303 T +A ++AEELG+T N++ + K + NP V+R LGI S G LGL++ W Y II+++ Sbjct: 242 TLFASISAEELGVTTANVDTMLK-SKNPSVKRLLGI--SGKTGADLGLSEKWAYNIIKNV 298 Query: 304 GNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F+RN+G++S L I RG N LW+ GGLMY PIR Sbjct: 299 GNYGEVFERNVGSKSPLNIKRGLNNLWNNGGLMYPMPIR 337 >gi|163733776|ref|ZP_02141218.1| glutamate/glutamine/aspartate/asparagine-binding protein [Roseobacter litoralis Och 149] gi|161392887|gb|EDQ17214.1| glutamate/glutamine/aspartate/asparagine-binding protein [Roseobacter litoralis Och 149] Length = 338 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 154/342 (45%), Positives = 223/342 (65%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L I + + A L D+K RG L CG+ TGLVGFA A+G+W GFD Sbjct: 1 MKKSVLLG--ALTIAGLAAGAAAAGTLDDVKARGTLNCGVTTGLVGFAAPNADGEWNGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ D + ++++P K RF AL S +ID+L+RNT WT R++ L F Sbjct: 59 VAICRAVAAAVLGDATAVEFVPTTGKTRFTALASGEIDMLARNTTWTFSRDVDLKFTFVG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K G++S +L GA++C+Q GTTTEL LAD+F+A+N+ Y P+ E Sbjct: 119 VNYYDGQGFMVPKSLGVTSAKELDGATVCIQTGTTTELNLADFFRANNISYEPVPIETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT D S L A + T + P+EHV+LP+IISK PL P + GD EW ++ Sbjct: 179 EGQQQYLAGACDTYTTDASGLAATRATFENPTEHVLLPEIISKEPLGPLVRHGDDEWGDV 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT A++TAEELG+T N+++++ + NP+V+R LG + + +GE LGL DW + I Sbjct: 239 VRWTLNALITAEELGVTSANVSEMATGSNNPEVKRLLGSEGT--LGEMLGLEADWAMKAI 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F +N+G ++ + + RG NA W+ GGL+Y+PP R Sbjct: 297 ATQGNYGEIFAKNIGEETPIALSRGLNAQWTNGGLIYSPPFR 338 >gi|110807125|ref|YP_690645.1| putative periplasmic binding transport protein [Shigella flexneri 5 str. 8401] gi|110616673|gb|ABF05340.1| putative periplasmic binding transport protein [Shigella flexneri 5 str. 8401] Length = 341 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 156/343 (45%), Positives = 232/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K ++ +L + +A + L ++K+GF++CGI+ GL F+ A+G + G Sbjct: 1 MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPRFSYADADGKFSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +G+AF Sbjct: 61 DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + +GD EW++ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GI +N+++ + + PD+ LG + + G+ L L W Y I Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKEG--DYGKDLKLDNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341 >gi|330811534|ref|YP_004355996.1| Putative amino acid ABC transporter, periplasmic component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379642|gb|AEA70992.1| Putative amino acid ABC transporter, periplasmic component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 343 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 159/345 (46%), Positives = 225/345 (65%), Gaps = 5/345 (1%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K + +L + F+ + L ++K+GF++CG++ GL GF+ + G G Sbjct: 1 MKLLKSTLAVMTAAAVLGVSGFAQAGATLDAVQKKGFVQCGVSDGLPGFSVPDSTGKIVG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 D DFCRA+++A+F D +K+++ LNAKERF ALQS +ID+LSRN+ T R+ +GL F Sbjct: 61 IDADFCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDMLSRNSTMTSSRDAGMGLKF 120 Query: 119 RP-ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 ITY+DG GF+ + K G+ S +L GA+IC+QAGTTTEL ++DYF+A+ +KY PI F+ Sbjct: 121 PGFITYYDGIGFLANNKLGVKSAKELDGATICIQAGTTTELNVSDYFRANGLKYTPITFD 180 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 +E + + RCD T D S L+A + P ++V+LP+ ISK PL P + GD EW Sbjct: 181 TSDESAKSLESGRCDVLTSDKSQLFAQRSKLASPKDYVVLPETISKEPLGPVVRNGDDEW 240 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297 IV WT YA++ AEE G+T KN+ +K T NPDV R LG D G+ L L KDW Sbjct: 241 LAIVRWTGYALLNAEEAGVTSKNVEAEAKSTKNPDVARMLGADGE--YGKDLKLPKDWVV 298 Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +I++ +GNYGEMF+RNLG + L+I RG NALW+ GG+ YAPP+R Sbjct: 299 QIVKQVGNYGEMFERNLGKGTPLEIDRGLNALWNAGGIQYAPPVR 343 >gi|15966449|ref|NP_386802.1| putative amino acid-binding periplasmic signal peptide protein [Sinorhizobium meliloti 1021] gi|15075720|emb|CAC47275.1| Putative amino acid-binding periplasmic signal peptide protein [Sinorhizobium meliloti 1021] Length = 331 Score = 428 bits (1102), Expect = e-118, Method: Composition-based stats. Identities = 155/334 (46%), Positives = 229/334 (68%), Gaps = 3/334 (0%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 + F + A+ L +K+RG L+CG++ G++GF+ G+W GFD+DFCRA++ Sbjct: 1 MALFATAFLAGTTAQAATLDVVKQRGELRCGVSQGVLGFSAPDDKGEWSGFDIDFCRAVA 60 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 +A P K++Y+PL+ KERF ALQS ++D+LSR T WTL R+ LG++F + Y+DGQ Sbjct: 61 AATLGSPDKVKYVPLSTKERFTALQSGEVDLLSRQTTWTLSRDTDLGMSFVGVNYYDGQA 120 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 F++ G+ SV +LSGAS+C + GTTTE +ADYF A+ ++Y I FE+ ++ A+ + Sbjct: 121 FMVRGDIGVKSVKELSGASVCTETGTTTEQNMADYFSANKIEYQVIAFEKADQTIQAFNS 180 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 RCD Y+ D SALY+ +LT + P V+LP++ISK PL PA+ QGD +W+ +V WT +AM Sbjct: 181 GRCDVYSTDASALYSQRLTLNDPDRFVVLPEVISKEPLGPAVRQGDDQWFKVVRWTLFAM 240 Query: 249 VTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGE 308 + AEELGIT++N + + T +RFLGID + G+ALGL W Y+ + +GNYGE Sbjct: 241 IEAEELGITRENAASLLESGTAAQ-KRFLGID--NEAGKALGLDPKWAYQTVAAVGNYGE 297 Query: 309 MFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +F+R+LG +S L+I RG N LW+ GGL+YAPP+R Sbjct: 298 IFERHLGKESALRIDRGLNKLWNNGGLIYAPPVR 331 >gi|170720090|ref|YP_001747778.1| extracellular solute-binding protein [Pseudomonas putida W619] gi|169758093|gb|ACA71409.1| extracellular solute-binding protein family 3 [Pseudomonas putida W619] Length = 342 Score = 428 bits (1102), Expect = e-118, Method: Composition-based stats. Identities = 160/342 (46%), Positives = 230/342 (67%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L S + + L +KK+GF++CG++ GL GF+ A G G D Sbjct: 3 MLKTTLAVLTAAAALGAVSTAQAGATLDAVKKKGFVQCGVSDGLPGFSVPDAQGKIVGID 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D CRA+++A+F D +K+++ LNAKERF ALQS ++D+LSRNT WT R+ +GL F Sbjct: 63 ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEVDVLSRNTTWTSSRDAGMGLVFAG 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DG GF+++KK G+SS +L GA+IC+QAGTTTEL ++DYF+A+ +KY PI F+ + Sbjct: 123 VTYYDGVGFLVNKKLGVSSAKELDGATICIQAGTTTELNVSDYFRANGLKYTPITFDTSD 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + + RCD T D S L+A + P+++V+LP+ ISK PL P + +GD EW++I Sbjct: 183 ESAKSLESGRCDVLTSDKSQLFAQRSKLAGPTDYVVLPETISKEPLGPVVRKGDEEWFSI 242 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEE G+T KN+ +K T NPD R LG D G+ L L KDW +I+ Sbjct: 243 VKWTLFAMLNAEEAGVTSKNVEAEAKSTKNPDTARLLGADGE--YGKDLKLPKDWVVQIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F++NLG ++LKI RG NALW+ GG+ YAPP+R Sbjct: 301 KQVGNYGEVFEKNLGQSTDLKIDRGMNALWNNGGIQYAPPVR 342 >gi|156741438|ref|YP_001431567.1| extracellular solute-binding protein [Roseiflexus castenholzii DSM 13941] gi|156232766|gb|ABU57549.1| extracellular solute-binding protein family 3 [Roseiflexus castenholzii DSM 13941] Length = 389 Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats. Identities = 153/319 (47%), Positives = 210/319 (65%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 L I+ RG L CG+N+ + GF V G + GFD+D+C+AL++AIF+D SKI+Y PL Sbjct: 71 GETLKAIQARGKLICGVNSQVPGFGFVDPTGAFSGFDIDYCKALAAAIFNDVSKIEYRPL 130 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 A++RF ALQS +ID+L RNT WTL R+ G F T++DGQG ++ K I+ + L Sbjct: 131 TAEQRFAALQSGEIDVLIRNTTWTLTRDTDNGGNFVATTFYDGQGIMVPKASNITKLEDL 190 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 +GA+ICVQ GTTTEL LAD A N+ Y P FE AAY RCDA T D S L + Sbjct: 191 NGATICVQKGTTTELNLADQMNARNLAYTPATFEDANSTFAAYAEERCDAVTTDKSGLVS 250 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 + P +HVIL +SK PL P + QGD +W++IV W +A AEE GIT +N++Q Sbjct: 251 RRSVLPNPDDHVILDVTLSKEPLGPMVRQGDDQWFDIVQWAVFATFAAEEFGITSQNVDQ 310 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 + + T P+V+R LG D + ++G LGL+KDW +I+ +GNYGE++DRNLG ++ IP Sbjct: 311 LKETDTRPEVRRLLGADPNVDLGAKLGLSKDWAANVIKAVGNYGEIYDRNLGPNTKTAIP 370 Query: 324 RGYNALWSKGGLMYAPPIR 342 RG N L+++GGL+YAPP R Sbjct: 371 RGINNLYTQGGLLYAPPFR 389 >gi|148549630|ref|YP_001269732.1| extracellular solute-binding protein [Pseudomonas putida F1] gi|148513688|gb|ABQ80548.1| extracellular solute-binding protein, family 3 [Pseudomonas putida F1] Length = 342 Score = 428 bits (1100), Expect = e-118, Method: Composition-based stats. Identities = 161/342 (47%), Positives = 231/342 (67%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L S + + L +KK+GF++CG++ GL GF+ A G G D Sbjct: 3 MLKTTLAVLTAAAALGAVSTAQAGATLDAVKKKGFVQCGVSDGLPGFSVPDAQGKIVGID 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D CRA+++A+F D +K+++ LNAKERF ALQS ++D+LSRNT WT R+ +GL F Sbjct: 63 ADVCRAVAAAVFRDATKVKFSQLNAKERFTALQSGEVDVLSRNTTWTSSRDAGMGLVFAG 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DG GF+++KK G+SS +L GA+IC+QAGTTTEL ++D+F+A+ +KY PI F+ + Sbjct: 123 VTYYDGVGFLVNKKLGVSSAKELDGATICIQAGTTTELNVSDFFRANGLKYTPITFDTSD 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + + RCD T D S L+A + P+++V+LP+ ISK PL P + +GD EW++I Sbjct: 183 ESAKSLESGRCDVLTSDKSQLFAQRSKLAAPTDYVVLPETISKEPLGPVVRKGDEEWFSI 242 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEE GIT KN+ +K T NPDV R LG D G+ L L KDW +I+ Sbjct: 243 VKWTLFAMLNAEEAGITSKNVEAEAKATKNPDVARLLGADGE--YGKDLKLPKDWVVQIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F++NLG ++LKI RG NALW+ GG+ YAPP+R Sbjct: 301 KQVGNYGEVFEKNLGQSTDLKIDRGMNALWNNGGIQYAPPVR 342 >gi|89901102|ref|YP_523573.1| extracellular solute-binding protein [Rhodoferax ferrireducens T118] gi|89345839|gb|ABD70042.1| extracellular solute-binding protein, family 3 [Rhodoferax ferrireducens T118] Length = 344 Score = 428 bits (1100), Expect = e-118, Method: Composition-based stats. Identities = 160/340 (47%), Positives = 219/340 (64%), Gaps = 3/340 (0%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 +++ + F ++ + L IK RG + CG+NTGL GF + G W G DVD Sbjct: 7 QTLTAVVATVGAFMSAPAHAGKTLDGIKARGQVVCGVNTGLAGFGAADSAGKWTGLDVDV 66 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 CRA+++A D KI+Y+PLNA++RF ALQS ++D+LSRNT +TL R+ SLGL +TY Sbjct: 67 CRAIAAATLGDAEKIKYVPLNAQQRFTALQSGEVDVLSRNTTFTLTRDASLGLHDTAVTY 126 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 +DGQGF++ K I S QL G ++CVQ+GTTTE L DY KA+ + P+VFE++E + Sbjct: 127 YDGQGFMVPVKSKIKSAKQLKGQTVCVQSGTTTEKNLTDYSKANGLNIKPVVFEKLEAAE 186 Query: 184 AAYRAHRCDAYTGDISALYALK-LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 AY RC AYT D S L + + P EH+ILP++ISK PL P + +GD EW+ IV Sbjct: 187 NAYFTGRCIAYTTDASGLASTRNKVAKDPKEHIILPELISKEPLGPMVRRGDDEWFAIVK 246 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302 W Y ++ AEE GITQ N+ + + +P VQR LG S + G+ LGL+KDW I+ Sbjct: 247 WVIYGLLEAEEYGITQANLEGLKATSKDPVVQRILGT--SEDSGKLLGLSKDWMANAIKA 304 Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F+RN+G S L +PRG N W+KGGLMYA P+R Sbjct: 305 TGNYGEIFERNVGPNSPLGLPRGVNNQWNKGGLMYAYPVR 344 >gi|197336291|ref|YP_002156345.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio fischeri MJ11] gi|197317781|gb|ACH67228.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio fischeri MJ11] Length = 342 Score = 428 bits (1100), Expect = e-118, Method: Composition-based stats. Identities = 162/339 (47%), Positives = 230/339 (67%), Gaps = 3/339 (0%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 F +I L + L ++K G+L+CG++TGL GF+ + G+W+G DV+F Sbjct: 7 TLFAAIATSAALLSAPALAASGTLEKVQKNGYLQCGVSTGLPGFSNPNSKGEWEGIDVEF 66 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 C+A+++A+ D SK++Y+PL AKERF ALQS +ID+LSRNT WTL R+ SLGL F + Y Sbjct: 67 CQAVAAAVLGDKSKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTSLGLNFVGVNY 126 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 +DGQGF++ K+ G++S +L GAS+CVQ+GTTTEL LADYF+ +NM+Y P+VF+ + Sbjct: 127 YDGQGFMVKKELGLTSAKELDGASVCVQSGTTTELNLADYFRNNNMEYKPVVFDTAAQTS 186 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 + A RCD T D S LYAL+L P +LP+IISK PL P + QGD +W+NI W Sbjct: 187 KGFDAGRCDVLTTDQSGLYALRLNLKDPKTAQVLPEIISKEPLGPVVRQGDDQWFNINKW 246 Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHM 303 AM+ AEE I+ KN +Q+ K + +P+++R LG+D G+ LG+ DW Y++++ + Sbjct: 247 VLNAMINAEEYDISSKNADQMLK-SKDPNIKRILGVDGPK--GKGLGIRDDWGYQVVKQV 303 Query: 304 GNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE F+R +G S L+I RG NALW+ GG MYA PIR Sbjct: 304 GNYGESFERTVGEGSPLQISRGVNALWNAGGFMYAAPIR 342 >gi|149913099|ref|ZP_01901633.1| hypothetical protein RAZWK3B_03885 [Roseobacter sp. AzwK-3b] gi|149813505|gb|EDM73331.1| hypothetical protein RAZWK3B_03885 [Roseobacter sp. AzwK-3b] Length = 338 Score = 428 bits (1100), Expect = e-118, Method: Composition-based stats. Identities = 154/342 (45%), Positives = 221/342 (64%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L I ++ + A+ L D+K RG L CG+ TGLVGFA ANG+W+GFD Sbjct: 1 MKKTVILG--ALTIAGLSAGAAAAATLDDVKARGKLNCGVTTGLVGFAAPDANGEWQGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ DP+ ++++P K RF AL S +ID+L+RNT WT R++ L F Sbjct: 59 VGVCRAVAAAVLGDPTAVEFVPTTGKTRFTALASGEIDLLARNTTWTFSRDVDLKFEFVG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 I Y+DGQGF++ K G++S +L GA++C+Q GTTTEL LAD+F+ +N+ Y P+ E Sbjct: 119 INYYDGQGFMVPKSLGVTSAKELDGATVCIQTGTTTELNLADFFRVNNISYEPVPIETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y CD YT D S L A + + PSEHVILP+IISK PL P + GD+EW +I Sbjct: 179 EAQPLYLEGACDVYTTDASGLAATRAAFETPSEHVILPEIISKEPLGPLVRHGDSEWGDI 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 WT A++ AEE G+T N+ +++ T NP++ R LG + + +GE LGL +W R I Sbjct: 239 ARWTLNALIAAEEYGVTSANVAELANGTDNPEINRLLGTEGT--LGEMLGLDAEWAKRAI 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F++N+G + + + RG NA W++GGL+Y+PP R Sbjct: 297 MAGGNYGELFEKNIGENTPIGLSRGLNAQWTEGGLLYSPPFR 338 >gi|300718662|ref|YP_003743465.1| L-amino acid ABC transporter, solute-binding protein [Erwinia billingiae Eb661] gi|299064498|emb|CAX61618.1| L-amino acid ABC transporter, solute-binding protein [Erwinia billingiae Eb661] Length = 341 Score = 427 bits (1099), Expect = e-118, Method: Composition-based stats. Identities = 164/343 (47%), Positives = 233/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K +++ LF + +A L IKK+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKMMLSTLVAAAALFAVANQAHAGTTLDAIKKKGFIQCGISDGLPGFSFADASGKFSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CRA ++A+F D +K++Y PL AKERF ALQS ++DILSRNT WT R+ +G F Sbjct: 61 DVDVCRAAAAAVFGDATKVKYTPLTAKERFTALQSGEVDILSRNTTWTSARDGGMGFIFA 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Y+DG GF+ H+K G+ S +L GA++C+QAGT TEL +ADYFKA+NM+Y P+ F+R Sbjct: 121 GVNYYDGIGFLTHQKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMQYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A RCD D S LYAL++ +P+E ++LP++ISK PL P + +GD +W+ Sbjct: 181 DESAKALDTGRCDTLASDQSQLYALRIKLGKPNEFIVLPEVISKEPLGPVVRRGDDDWFT 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV W+ YAM+ AEE+GIT N++Q++ TNPD+ LG + + G+ L L W Y I Sbjct: 241 IVKWSLYAMLNAEEMGITSANVDQLAAKPTNPDMAHLLGSEG--DFGKDLKLDNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++ +GNY E+FDRN+G S+LKI RG NALW+KGG+ YAPP+R Sbjct: 299 VKQVGNYQEVFDRNVGKDSQLKIARGQNALWNKGGIQYAPPVR 341 >gi|312959110|ref|ZP_07773629.1| extracellular solute-binding protein, family 3 [Pseudomonas fluorescens WH6] gi|311286880|gb|EFQ65442.1| extracellular solute-binding protein, family 3 [Pseudomonas fluorescens WH6] Length = 343 Score = 427 bits (1099), Expect = e-118, Method: Composition-based stats. Identities = 159/345 (46%), Positives = 225/345 (65%), Gaps = 5/345 (1%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K + +L + F+ + L ++K+GF++CG++ GL GF+ A+G G Sbjct: 1 MKVLKSTLAIVCAAAVLGVSGFAQAGATLDAVQKKGFVQCGVSDGLPGFSVPDASGKILG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 D D CRA+++A+F D +K+++ LNAKERF ALQS ++DILSRNT T R+ +GL F Sbjct: 61 IDADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEVDILSRNTTMTSSRDAGMGLKF 120 Query: 119 RP-ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 ITY+DG GF+++ K G+ S +L GA+IC+QAGTTTEL ++DYF+ + +KY PI F+ Sbjct: 121 PGFITYYDGIGFLVNNKLGVKSAKELDGATICIQAGTTTELNVSDYFRGNGLKYTPITFD 180 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 +E + + RCD T D S L+A + P ++V+LP+ ISK PL P + GD EW Sbjct: 181 TSDESAKSLESGRCDVLTSDKSQLFAQRSKLASPKDYVVLPETISKEPLGPVVRNGDDEW 240 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297 IV W YAM+ AEE GIT KN+ +K T NPDV R LG D G+ L + KDW Sbjct: 241 LAIVRWVGYAMLNAEEAGITSKNVEAEAKSTKNPDVARLLGADGE--YGKDLKVKKDWVV 298 Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +I++ +GNYGE+F+RNLG + L+I RG NALW+KGG+ YAPP+R Sbjct: 299 QIVKQVGNYGEVFERNLGKSTPLEIDRGLNALWNKGGIQYAPPVR 343 >gi|325275056|ref|ZP_08141044.1| general amino acid ABC transporter, periplasmic binding protein [Pseudomonas sp. TJI-51] gi|324099819|gb|EGB97677.1| general amino acid ABC transporter, periplasmic binding protein [Pseudomonas sp. TJI-51] Length = 342 Score = 427 bits (1099), Expect = e-117, Method: Composition-based stats. Identities = 158/324 (48%), Positives = 227/324 (70%), Gaps = 2/324 (0%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 S + + L +KK+GF++CG++ GL GF+ A G G D D CRA+++A+F D +K+ Sbjct: 21 SNAQAGATLDAVKKKGFVQCGVSDGLPGFSVPDAQGKIIGIDADVCRAVAAAVFGDANKV 80 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 ++ LNAKERF ALQS ++D+LSRNT WT R+ +GL F +TY+DG GF+++KK G+S Sbjct: 81 KFSQLNAKERFTALQSGEVDVLSRNTTWTSSRDAGMGLVFTGVTYYDGVGFLVNKKLGVS 140 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 S +L GA+IC+QAGTTTEL ++D+F+A+ +KY PI F+ +E + + RCD T D Sbjct: 141 SAKELDGATICIQAGTTTELNVSDFFRANGLKYTPITFDTSDESAKSLESGRCDVLTSDK 200 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 S L+A + P+E+V+LP+ ISK PL P + +GD +W++IV WT +AM+ AEE GIT Sbjct: 201 SQLFAQRSKLAAPTEYVVLPETISKEPLGPVVRKGDEDWFSIVKWTLFAMLNAEEAGITS 260 Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318 KN+ +K T NPDV R LG D G+ L L KDW +I++ +GNYGE+F++NLG + Sbjct: 261 KNVEAEAKATKNPDVARLLGADGE--YGKDLKLPKDWVVQIVKQVGNYGEVFEKNLGQGT 318 Query: 319 ELKIPRGYNALWSKGGLMYAPPIR 342 +LKI RG NALW+ GG+ YAPP+R Sbjct: 319 DLKIDRGMNALWNNGGIQYAPPVR 342 >gi|152989661|ref|YP_001346638.1| putative amino acid-binding protein [Pseudomonas aeruginosa PA7] gi|150964819|gb|ABR86844.1| probable amino acid-binding protein [Pseudomonas aeruginosa PA7] Length = 341 Score = 427 bits (1099), Expect = e-117, Method: Composition-based stats. Identities = 153/323 (47%), Positives = 230/323 (71%), Gaps = 2/323 (0%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 + + L +K++G+L+CG++ GL GF+ A G ++G DVDFCRAL++A+F D K++ Sbjct: 21 TAQAGATLDAVKRKGYLQCGVSDGLAGFSYADAKGRYQGLDVDFCRALAAALFGDAGKVR 80 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 + PL+ ERF ALQS +D+LSRNT WT R+ +LG+ F +TYFDGQGF+++++ G+SS Sbjct: 81 FTPLSTTERFSALQSGTVDLLSRNTSWTSARDTALGIHFTGVTYFDGQGFLVNRRLGVSS 140 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 +L A++C+Q+GTT EL +ADYF+AH ++Y ++ + E+ A A +CD + D S Sbjct: 141 ARELKDATVCIQSGTTNELNVADYFRAHGIRYKAVLDDSYEKSARALEAGQCDVLSSDQS 200 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 LYA +L +P ++V+LP++ISK PL PA+ QGD W+NIV WT Y ++ AEELG+T Sbjct: 201 QLYAQRLKLAKPEQYVVLPEVISKEPLGPAVRQGDEAWFNIVRWTLYGLLNAEELGVTSS 260 Query: 260 NINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSE 319 N+ + ++D+ NPDV R LG + ++G+ L L +DW +++R +GNYGE+F RN+G+ S Sbjct: 261 NVERQARDSRNPDVARLLGSEG--DVGKDLQLPRDWVVQMVRQVGNYGEIFARNVGDGSP 318 Query: 320 LKIPRGYNALWSKGGLMYAPPIR 342 LK+PRG NA W+ GGL YAPPIR Sbjct: 319 LKMPRGLNAQWNLGGLHYAPPIR 341 >gi|144899134|emb|CAM75998.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Magnetospirillum gryphiswaldense MSR-1] Length = 340 Score = 427 bits (1098), Expect = e-117, Method: Composition-based stats. Identities = 154/342 (45%), Positives = 235/342 (68%), Gaps = 3/342 (0%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K F + + + + + +K +GF++CG+N GL GF+ G+W G DV Sbjct: 1 MKAFKACAIAATLAVTSMPAWAGPTVDAVKAKGFVQCGVNLGLYGFSAPDDKGNWSGLDV 60 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D CRA+++A+F D SK++Y PL+A++R ALQS +ID+L+RNT WTL R+ + GL F Sbjct: 61 DACRAVAAAVFGDASKVKYTPLSAQQRLPALQSGEIDLLARNTTWTLSRDTANGLNFTVT 120 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y+DGQGF++ K G+ + +L+GA++CV GTTTE LAD+F+A+ M Y P+V E+ EE Sbjct: 121 NYYDGQGFMVPTKLGVKAAKELNGATVCVLPGTTTEQNLADWFRANKMTYKPVVIEKNEE 180 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + +A+ A RCD YT D S L A++ P++++ILP++ISK PLA A+ GD +W ++ Sbjct: 181 LASAFIAGRCDVYTSDASQLAAIRANEMPNPADYLILPELISKEPLAVAVRHGDDQWMDV 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V W+ YAM+ AEE G+T N++Q++ + +P+++R LG+ ++ G+ALGL + W II Sbjct: 241 VRWSIYAMIAAEEKGVTMANVDQMAASSPDPEIKRLLGV--TAGNGKALGLDEAWAKTII 298 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE FDRN+G+ S+LKI RG NAL+++GGLMYAPP + Sbjct: 299 KQVGNYGESFDRNVGSGSKLKIARGQNALYTQGGLMYAPPFK 340 >gi|83950493|ref|ZP_00959226.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Roseovarius nubinhibens ISM] gi|83838392|gb|EAP77688.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Roseovarius nubinhibens ISM] Length = 339 Score = 427 bits (1098), Expect = e-117, Method: Composition-based stats. Identities = 155/343 (45%), Positives = 220/343 (64%), Gaps = 5/343 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ L + + + A L D+K RG L CG+ TGLVGFA NG W GFD Sbjct: 1 MKKSVFLG--ALTVAGLAAGAAAAGTLDDVKARGKLNCGVTTGLVGFAAPDENGRWDGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ DP ++++P K RF AL S +ID+L+RNT WT R++ L F Sbjct: 59 VGVCRAVAAAVLGDPDAVEFVPTTGKTRFTALASGEIDVLARNTTWTFSRDVDLKFTFVG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y++GQGF++ K+ G+SS +L GA++C+Q GTTTEL LAD+F+A+N+ Y P+ E Sbjct: 119 VNYYNGQGFMVPKELGVSSAKELDGATVCIQTGTTTELNLADFFRANNISYEPVPIETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT D S L A + + + P++HV+LP+IISK PL P + GD EW ++ Sbjct: 179 EGQQQYLAGACDTYTTDASGLAATRASFENPADHVVLPEIISKEPLGPLVRHGDDEWGDV 238 Query: 241 VSWTHYAMVTAEELGITQKNINQV-SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 V WT A++ AEELGIT NI ++ + NP+V R LG + N+GE LGL DW + Sbjct: 239 VRWTLNALIAAEELGITSANIGELSAAAGDNPEVNRLLGTEG--NLGEMLGLDADWAVKA 296 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++ GNYGE+F++N+G S + + RG NA W+ GGL+Y+PP R Sbjct: 297 VQAGGNYGELFEKNIGENSPVGLARGLNAQWTDGGLLYSPPFR 339 >gi|84499808|ref|ZP_00998096.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Oceanicola batsensis HTCC2597] gi|84392952|gb|EAQ05163.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Oceanicola batsensis HTCC2597] Length = 339 Score = 426 bits (1097), Expect = e-117, Method: Composition-based stats. Identities = 158/343 (46%), Positives = 220/343 (64%), Gaps = 5/343 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ L + L + + K RG L CG++TGL GF+ ANG+W+GFD Sbjct: 1 MKKSVFLGALTVAGLAAGAAAAATLDDV--KARGTLNCGVSTGLAGFSAPNANGEWEGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ DP+ ++++P K RF AL S +ID+L+RNT WTL R+ L F Sbjct: 59 VAVCRAVATAVLGDPNAVEFVPTTGKTRFTALASGEIDMLARNTTWTLSRDADLKFTFIG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGFI K G+SS +L GA++C+Q GTTTEL LAD+F+ +N+ Y P+ E Sbjct: 119 VNYYDGQGFITPKALGVSSAKELDGATVCIQTGTTTELNLADFFRVNNISYEPVPIETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT D S L A + T + P++HVILP+IISK PL P + GD+EW ++ Sbjct: 179 EAQQQYLAGACDVYTTDASGLAATRATFETPTDHVILPEIISKEPLGPLVRHGDSEWGDV 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTT-NPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 V W+ AM+ AEELG+T N+ ++S TT NP++ R LG + N+GE LGL DW I Sbjct: 239 VRWSLNAMIAAEELGVTSANVEEMSSSTTDNPEINRLLGTEG--NLGEMLGLEADWAKNI 296 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I +GNYGE+F+ N+G + + + RG NA W+ GGL+YAPP R Sbjct: 297 IMQVGNYGEVFEANIGESTPIGLARGLNAQWTDGGLLYAPPFR 339 >gi|330862829|emb|CBX72970.1| putative amino-acid ABC transporter-binding protein yhdW [Yersinia enterocolitica W22703] Length = 341 Score = 426 bits (1097), Expect = e-117, Method: Composition-based stats. Identities = 161/343 (46%), Positives = 229/343 (66%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K +++ L + +A L +KK+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKIMISTLVAAASLVALAGQAHAGTTLDAVKKKGFVQCGISDGLPGFSYADASGKFSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++AIF D K++Y PL AKERF ALQS ++DILSRNT WT R+ +G+ F Sbjct: 61 DVDICRGVAAAIFGDAEKVKYTPLTAKERFTALQSGEVDILSRNTTWTSSRDAGMGMLFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Y+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+ M+Y P+ F+R Sbjct: 121 GVNYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMQYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ +P E ++LP++ISK PL P + +GD +W+ Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDEFIVLPEVISKEPLGPVVRRGDEDWFA 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+G+T KN+ +++ T PD+ LG + N G+ L + DW +I Sbjct: 241 IVRWTLFAMLNAEEMGVTSKNVEELAAKPTTPDMAHLLGQEG--NYGKDLKVPNDWVVKI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++ +GNYGE FDRN+G SELKI RG NALW+ GGL YAPP+R Sbjct: 299 VKQVGNYGESFDRNVGMGSELKIKRGQNALWNNGGLQYAPPVR 341 >gi|332163168|ref|YP_004299745.1| ABC transporter periplasmic solute-binding protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318603946|emb|CBY25444.1| glutamate Aspartate periplasmic binding protein precursor GltI [Yersinia enterocolitica subsp. palearctica Y11] gi|325667398|gb|ADZ44042.1| ABC transporter periplasmic solute-binding protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 341 Score = 426 bits (1097), Expect = e-117, Method: Composition-based stats. Identities = 161/343 (46%), Positives = 229/343 (66%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K +++ L + +A L +KK+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKIMISTLVAAASLVALAGQAHAGTTLDAVKKKGFVQCGISDGLPGFSYADASGKFSGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++AIF D K++Y PL AKERF ALQS ++DILSRNT WT R+ +G+ F Sbjct: 61 DVDICRGVAAAIFGDAEKVKYTPLTAKERFTALQSGEVDILSRNTTWTSSRDAGMGMLFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Y+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+ M+Y P+ F+R Sbjct: 121 GVNYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMQYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ +P E ++LP++ISK PL P + +GD +W+ Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDEFIVLPEVISKEPLGPVVRRGDEDWFA 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+G+T KN+ +++ T PD+ LG + N G+ L + DW +I Sbjct: 241 IVRWTLFAMLNAEEMGVTSKNVEELAAKPTTPDMAHLLGQEG--NYGKDLKVPNDWVVKI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++ +GNYGE FDRN+G SELKI RG NALW+ GGL YAPP+R Sbjct: 299 VKQVGNYGESFDRNVGMGSELKIKRGQNALWNNGGLQYAPPVR 341 >gi|148980390|ref|ZP_01816033.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrionales bacterium SWAT-3] gi|145961262|gb|EDK26574.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrionales bacterium SWAT-3] Length = 342 Score = 426 bits (1097), Expect = e-117, Method: Composition-based stats. Identities = 159/318 (50%), Positives = 223/318 (70%), Gaps = 3/318 (0%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L + +GFL CG++TGL GF+ + G+W+G DV++C+AL++A+ D +K++Y+PL Sbjct: 28 STLDKVTSQGFLTCGVSTGLPGFSNPNSKGEWEGIDVEYCQALAAAVLGDKTKVKYVPLT 87 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 AKERF ALQS +ID+LSRNT WTL R+ +LGL F + Y+DGQGF++ K G++S +L Sbjct: 88 AKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVGVNYYDGQGFMVKKDLGLTSALELD 147 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 GAS+CVQ+GTTTEL LADYF+ + M Y P+VF+ + + A RCD T D S LYAL Sbjct: 148 GASVCVQSGTTTELNLADYFRNNGMSYKPVVFDTAAQTSKGFDAGRCDVLTTDQSGLYAL 207 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 +L P +LP+IISK PL P + Q D +W+N+ WT AMV AEE GI+ KN +++ Sbjct: 208 RLNLADPKSAQVLPEIISKEPLGPVVRQDDDKWFNVAKWTLSAMVNAEEYGISSKNADEM 267 Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324 K + +P+++R LG+D G+ LG+ DW Y++I+ +GNYGE F+R +G S L+I R Sbjct: 268 LK-SKDPNIKRILGVDGPK--GKGLGIRDDWGYQVIKQVGNYGESFERTVGTGSPLQIDR 324 Query: 325 GYNALWSKGGLMYAPPIR 342 G NALW+ GG MYAPPIR Sbjct: 325 GVNALWNAGGFMYAPPIR 342 >gi|148658095|ref|YP_001278300.1| extracellular solute-binding protein [Roseiflexus sp. RS-1] gi|148570205|gb|ABQ92350.1| extracellular solute-binding protein, family 3 [Roseiflexus sp. RS-1] Length = 389 Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats. Identities = 152/319 (47%), Positives = 210/319 (65%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 L I+ RG L CG+N+ + GF V G + GFD+D+C+AL++AIF+D SK++Y PL Sbjct: 71 GETLKAIQARGKLICGVNSQVPGFGFVDPTGAFSGFDIDYCKALAAAIFNDVSKVEYRPL 130 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 A++RF ALQS +ID+L RNT WTL R+ G F T++DGQG ++ K I+ + L Sbjct: 131 TAEQRFAALQSGEIDVLIRNTTWTLTRDTDNGGNFVATTFYDGQGIMVPKASNITKLEDL 190 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 +GA+ICVQ GTTTEL LAD A ++Y P VFE AAY RCDA T D S L + Sbjct: 191 NGATICVQKGTTTELNLADQMAARKLQYTPAVFEDANSTFAAYAEERCDAVTTDKSGLVS 250 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 + P +HVIL +SK PL P + QGD +W++IV WT +A AEE GIT +N++Q Sbjct: 251 RRSVLPNPDDHVILDVTLSKEPLGPMVRQGDDQWFDIVQWTVFATFAAEEFGITSRNVDQ 310 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 + T P+V+R LG D + ++G LGL+KDW +I+ +GNY E++DRNLG ++ IP Sbjct: 311 AKESDTRPEVRRLLGADPNVDLGAKLGLSKDWAANVIKSVGNYAEIYDRNLGPNTKTAIP 370 Query: 324 RGYNALWSKGGLMYAPPIR 342 RG N L+++GGL+YAPP R Sbjct: 371 RGINNLYTQGGLLYAPPFR 389 >gi|302339786|ref|YP_003804992.1| extracellular solute-binding protein family 3 [Spirochaeta smaragdinae DSM 11293] gi|301636971|gb|ADK82398.1| extracellular solute-binding protein family 3 [Spirochaeta smaragdinae DSM 11293] Length = 365 Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats. Identities = 153/327 (46%), Positives = 217/327 (66%), Gaps = 2/327 (0%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 + T S L +K+RG + G+ G+ G++ + G W+GFDVD RA+++A+ DP Sbjct: 41 ATAAPETGKSTLELVKERGKVIVGVTAGVPGYSAPDSEGIWQGFDVDLGRAVAAAVLGDP 100 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 I+ PL+AKERF ALQS +ID+L R T WT R+ LG+ F + Y+DGQGF++ K Sbjct: 101 DAIECRPLSAKERFTALQSGEIDVLVRVTTWTATRDSQLGVNFAGVNYYDGQGFMVAKDS 160 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 GI+S++ L GA++ VQ+GTTTEL L+DYF+ +NM + I FE+ ++ AA A R DA T Sbjct: 161 GITSLADLDGATVAVQSGTTTELNLSDYFRKNNMDFELITFEKNDQASAALEAGRADAVT 220 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D S LYAL+ P ++LP++ISK PL P + QGD EW+NIV WT +AM+ AEE G Sbjct: 221 SDQSQLYALRTKFKEPENFIMLPELISKEPLGPVVRQGDDEWFNIVKWTLFAMLNAEEYG 280 Query: 256 ITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLG 315 IT N++++ + + NP+V+R LG + + E GL + Y II+++GNYGE F+RNLG Sbjct: 281 ITSDNVDEMKETSDNPNVKRLLGSEG--GVWEGFGLESNAGYNIIKYIGNYGESFERNLG 338 Query: 316 NQSELKIPRGYNALWSKGGLMYAPPIR 342 + S L I RG NALW+KGG+ Y PIR Sbjct: 339 SGSPLNISRGLNALWTKGGIQYGMPIR 365 >gi|59712139|ref|YP_204915.1| general L-amino acid-binding protein [Vibrio fischeri ES114] gi|59480240|gb|AAW86027.1| general L-amino acid-binding protein [Vibrio fischeri ES114] Length = 342 Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats. Identities = 161/339 (47%), Positives = 230/339 (67%), Gaps = 3/339 (0%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 F +I L + L ++K G+L+CG++TGL GF+ + G+W+G DV+F Sbjct: 7 KLFAAIATSAALLSAPALAASGTLEKVQKNGYLQCGVSTGLPGFSNPNSKGEWEGIDVEF 66 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 C+A+++A+ D SK++Y+PL AKERF ALQS +ID+LSRNT WTL R+ SLGL F + Y Sbjct: 67 CQAVAAAVLGDKSKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTSLGLNFVGVNY 126 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 +DGQGF++ K+ G++S +L GAS+CVQ+GTTTEL LADYF+ +NM+Y P+VF+ + Sbjct: 127 YDGQGFMVKKELGLTSAKELDGASVCVQSGTTTELNLADYFRNNNMEYKPVVFDTAAQTS 186 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 + A RCD T D S LYAL+L P +LP+IISK PL P + QGD +W+NI W Sbjct: 187 KGFDAGRCDVLTTDQSGLYALRLNLKDPKTAQVLPEIISKEPLGPVVRQGDDQWFNINKW 246 Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHM 303 M+ AEE GI+ KN +Q+ K + +P+++R LG+D G+ LG+ DW Y++++ + Sbjct: 247 VLNTMINAEEYGISSKNADQMLK-SKDPNIKRILGVDGPK--GKGLGIRDDWGYQVVKQV 303 Query: 304 GNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE F+R +G S L+I RG NALW+ GG +YA PIR Sbjct: 304 GNYGESFERTVGEGSPLQISRGVNALWNAGGFVYAAPIR 342 >gi|319779135|ref|YP_004130048.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Taylorella equigenitalis MCE9] gi|317109159|gb|ADU91905.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Taylorella equigenitalis MCE9] Length = 336 Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats. Identities = 151/343 (44%), Positives = 227/343 (66%), Gaps = 8/343 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L + L S A L +K RG + CG TG GF+ G+W+G D Sbjct: 1 MKK----LSLLIAGLVLASTQVQADTLETVKSRGHVVCGTTTGFAGFSAPNDKGEWEGLD 56 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD C+++++A+F D SK + +PLN+++RF ALQS +IDIL+RNT T R+ ++GL Sbjct: 57 VDLCKSIAAAVFGDASKFKTVPLNSQQRFTALQSGEIDILTRNTTVTQQRDTAIGLMSPG 116 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + ++DGQGF++ K G+ S +L GA++C+Q GT+ E T+AD+ +A+ + Y P+VF++ Sbjct: 117 VNFYDGQGFLIKKDLGVKSAKELDGATVCMQTGTSNENTMADWARANKITYKPVVFDQFN 176 Query: 181 EIDAAYRAHRCDAYTGDISALYALKL-TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E+ A+ + RCD +T D S L ++++ P ++V+LP+IISK PL P + Q D +W+N Sbjct: 177 EVVNAFASGRCDVFTTDASGLASIRISKLSNPDDYVVLPEIISKEPLGPFVRQSDDKWFN 236 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV W +A AEELGIT KN+++ K++TNP+VQR LG+ + G+ LGL++DW Y++ Sbjct: 237 IVKWVMHAQWNAEELGITSKNVDE-QKNSTNPNVQRLLGV--TEGSGKNLGLSEDWAYQV 293 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNYGE FDRN+G S LK+PRG N L++ GGL Y PIR Sbjct: 294 IKQVGNYGESFDRNVGKDSVLKVPRGLNKLYTDGGLHYGLPIR 336 >gi|84394265|ref|ZP_00992991.1| ABC-type amino acid transport, signal transduction system, periplasmic component/domain [Vibrio splendidus 12B01] gi|86148624|ref|ZP_01066906.1| ABC-type amino acid transport, signal transduction systems,periplasmic component/domain [Vibrio sp. MED222] gi|218709394|ref|YP_002417015.1| amino acid ABC transporter [Vibrio splendidus LGP32] gi|84375104|gb|EAP92025.1| ABC-type amino acid transport, signal transduction system, periplasmic component/domain [Vibrio splendidus 12B01] gi|85833580|gb|EAQ51756.1| ABC-type amino acid transport, signal transduction systems,periplasmic component/domain [Vibrio sp. MED222] gi|218322413|emb|CAV18566.1| Amino acid ABC transporter [Vibrio splendidus LGP32] Length = 342 Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats. Identities = 158/318 (49%), Positives = 223/318 (70%), Gaps = 3/318 (0%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L + +GFL CG++TGL GF+ + G+W+G DV++C+AL++A+ D +K++Y+PL Sbjct: 28 STLDKVTSQGFLTCGVSTGLPGFSNPNSKGEWEGIDVEYCQALAAAVLGDKTKVKYVPLT 87 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 AKERF ALQS +ID+LSRNT WTL R+ +LGL F + Y+DGQGF++ K+ G++S +L Sbjct: 88 AKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVGVNYYDGQGFMVKKELGLTSAQELD 147 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 GAS+CVQ+GTTTEL LADYF+ M Y P+VF+ + + A RCD T D S LYAL Sbjct: 148 GASVCVQSGTTTELNLADYFRNSGMSYKPVVFDTAAQTSKGFDAGRCDVLTTDQSGLYAL 207 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 +L P +LP+IISK PL P + Q D +W+N+ WT AM+ AEE GI+ KN +++ Sbjct: 208 RLNLADPKSAQVLPEIISKEPLGPVVRQDDDKWFNVAKWTLSAMINAEEYGISSKNADEM 267 Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324 K + +P+++R LG+D G+ LG+ DW Y++I+ +GNYGE F+R +G S L+I R Sbjct: 268 LK-SKDPNIKRILGVDGPK--GKGLGIRDDWGYQVIKQVGNYGESFERTVGTGSPLQISR 324 Query: 325 GYNALWSKGGLMYAPPIR 342 G NALW+ GG MYAPPIR Sbjct: 325 GVNALWNAGGFMYAPPIR 342 >gi|77462291|ref|YP_351795.1| ABC glutamate/glutamine/aspartate/asparagine transporter, periplasmic substrate-binding protein [Rhodobacter sphaeroides 2.4.1] gi|221638145|ref|YP_002524407.1| Cationic amino acid ABC transporter periplasmic binding protein [Rhodobacter sphaeroides KD131] gi|77386709|gb|ABA77894.1| ABC glutamate/glutamine/aspartate/asparagine transporter, periplasmic substrate-binding protein [Rhodobacter sphaeroides 2.4.1] gi|221158926|gb|ACL99905.1| Cationic amino acid ABC transporter, periplasmic binding protein precursor [Rhodobacter sphaeroides KD131] Length = 338 Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats. Identities = 149/342 (43%), Positives = 219/342 (64%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ L + + +A+ L D+K RG L CG++TGL GF+ ANG+W GFD Sbjct: 1 MTKSVFLGTLTVAG--LAAGLASAATLDDVKARGELNCGVSTGLTGFSLPDANGNWTGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ D +K++++P + RF AL S ++D+L+RN+ WT R+ L L F Sbjct: 59 VSLCRAVAAAVLGDGTKVKFVPTTGQTRFTALASGEVDMLARNSTWTFSRDTDLKLDFVG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K G++S +L GA++C+Q GTTTEL LAD+FK +N+ Y P+ E Sbjct: 119 VNYYDGQGFMVRKDLGVTSAKELDGATVCIQTGTTTELNLADWFKVNNLSYTPVAVETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + Y A CDAYT D S L A + P H+ILP+IISK PL PA+ GD EW +I Sbjct: 179 EGEQQYAAGACDAYTTDASGLAATRAAFADPENHIILPEIISKEPLGPAVRHGDNEWADI 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT A++ AEE G+T N+ +++ ++ NP++QR LG+ ++G+ + L DW R I Sbjct: 239 VRWTLNALIAAEEYGVTSANMEELAANSPNPEIQRLLGVQG--DLGKMIRLDNDWAKRAI 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F +G + + + RG NA W++GGL+YAPP R Sbjct: 297 AVGGNYGEIFAATIGEATPIGLARGLNAQWTQGGLLYAPPFR 338 >gi|123444011|ref|YP_001007981.1| ABC transporter periplasmic solute-binding protein [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122090972|emb|CAL13855.1| Putative ABC transporter periplasmic solute binding protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 341 Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats. Identities = 161/343 (46%), Positives = 229/343 (66%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K +++ L + +A L +KK+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKIMISTLVAAASLVALAGQAHAGTTLDAVKKKGFVQCGISDGLPGFSYADASGKFSGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++AIF D K++Y PL AKERF ALQS ++DILSRNT WT R+ +G+ F Sbjct: 61 DVDVCRGVAAAIFGDAEKVKYTPLTAKERFTALQSGEVDILSRNTTWTSSRDAGMGMLFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Y+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+ M+Y P+ F+R Sbjct: 121 GVNYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMQYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ +P E ++LP++ISK PL P + +GD +W+ Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDEFIVLPEVISKEPLGPVVRRGDEDWFA 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+G+T KN+ +++ T PD+ LG + N G+ L + DW +I Sbjct: 241 IVRWTLFAMLNAEEMGVTSKNVEELAAKPTTPDMAHLLGQEG--NYGKDLKVPNDWVVKI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++ +GNYGE FDRN+G SELKI RG NALW+ GGL YAPP+R Sbjct: 299 VKQVGNYGESFDRNVGMGSELKIKRGQNALWNNGGLQYAPPVR 341 >gi|229588541|ref|YP_002870660.1| putative amino acid ABC transporter substrate-binding protein [Pseudomonas fluorescens SBW25] gi|229360407|emb|CAY47264.1| putative amino acid ABC transport system, substrate-binding protein [Pseudomonas fluorescens SBW25] Length = 343 Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 159/345 (46%), Positives = 225/345 (65%), Gaps = 5/345 (1%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K + +L + F+ + L ++K+GF++CG++ GL GF+ A+G G Sbjct: 1 MKVLKSTLAIVSAAAVLGVSGFAQAGATLDAVQKKGFVQCGVSDGLPGFSVPDASGKILG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 D D CRA+++A+F D +K+++ LNAKERF ALQS ++DILSRNT T R+ +GL F Sbjct: 61 IDADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEVDILSRNTTMTSSRDAGMGLKF 120 Query: 119 RP-ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 ITY+DG GF+++ K G+ S +L GA+IC+QAGTTTEL ++DYF+ +N+KY PI F+ Sbjct: 121 PGFITYYDGIGFLVNNKLGVKSAKELDGATICIQAGTTTELNVSDYFRGNNLKYTPITFD 180 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 +E + + RCD T D S L+A + P ++V+LP+ ISK PL P + GD EW Sbjct: 181 TSDESAKSLESGRCDVLTSDKSQLFAQRSKLAAPKDYVVLPETISKEPLGPVVRNGDDEW 240 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297 IV W YAM+ AEE GIT KN+ +K T NPDV R LG D G+ L + KDW Sbjct: 241 LAIVRWVGYAMLNAEEAGITSKNVEAEAKSTKNPDVARLLGADGE--YGKDLKVKKDWVV 298 Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +I++ +GNYGE+F+RNLG + L+I RG NALW+ GG+ YAPP+R Sbjct: 299 QIVKQVGNYGEVFERNLGKSTPLEIDRGLNALWNNGGIQYAPPVR 343 >gi|86605966|ref|YP_474729.1| polar amino acid ABC transporter amino acid-binding protein [Synechococcus sp. JA-3-3Ab] gi|86608412|ref|YP_477174.1| polar amino acid ABC transporter periplasmic amino acid-binding protein [Synechococcus sp. JA-2-3B'a(2-13)] gi|86554508|gb|ABC99466.1| polar amino amino acid ABC transporter (PAAT) family, amino acid-binding protein [Synechococcus sp. JA-3-3Ab] gi|86556954|gb|ABD01911.1| polar amino amino acid ABC transporter (PAAT) family, periplasmic amino acid-binding protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 345 Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats. Identities = 145/332 (43%), Positives = 214/332 (64%), Gaps = 6/332 (1%) Query: 11 CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70 + + +++ + IK RG L CG+N L GF + G + GFD+D CRA+++A Sbjct: 20 SMGLQSLPAWAQLGPLTDRIKARGELICGVNNQLPGFGNLDDQGKYVGFDIDICRAVAAA 79 Query: 71 IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130 +F DP K++Y+ L A R A+QS ++D++SRNT WTL R+ + F P TY+DGQGF+ Sbjct: 80 LFGDPDKVRYVYLTAANRQSAIQSGEVDMISRNTTWTLTRDREWAVTFGPTTYYDGQGFM 139 Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190 + K G+ + L+GA+ICV AGTTTEL LAD F+A + + P+ F+ + AY R Sbjct: 140 VRKSLGVEKLEDLNGATICVIAGTTTELNLADTFRARGIAFTPVTFDGDDSSFNAYEEGR 199 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 CDA T D SAL + + + P +HVILP++ISK PL P + GD + +I++WT YA+ Sbjct: 200 CDAITSDQSALISRRASLASPDDHVILPEVISKEPLGPLVPHGDESFSDIMNWTVYALFY 259 Query: 251 AEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMF 310 AEE GIT N+++ K + +PD++RFLG + N+GE LGL DW +I+ +GNYGE+F Sbjct: 260 AEEKGITSANVDEFLK-SEDPDIRRFLGQEG--NLGELLGLKPDWVVNVIKAVGNYGEIF 316 Query: 311 DRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +R+L + L +PRG N ++KGG+ YAPP R Sbjct: 317 NRHL---TPLGVPRGLNQPYTKGGIQYAPPFR 345 >gi|238798512|ref|ZP_04641991.1| Extracellular solute-binding protein, family 3 [Yersinia mollaretii ATCC 43969] gi|238717674|gb|EEQ09511.1| Extracellular solute-binding protein, family 3 [Yersinia mollaretii ATCC 43969] Length = 341 Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats. Identities = 161/343 (46%), Positives = 229/343 (66%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K F +++ L + +A L +KK+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKMMFSTLVAAASLVALAGQAHAGTTLDAVKKKGFVQCGISDGLPGFSYADASGKFSGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++AIF D K++Y PL AKERF ALQS ++DILSRNT WT R+ +G+ F Sbjct: 61 DVDVCRGVAAAIFGDAEKVKYTPLTAKERFTALQSGEVDILSRNTTWTSSRDAGMGMLFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Y+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+ M+Y P+ F+R Sbjct: 121 GVNYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMQYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ +P E ++LP++ISK PL P + +GD +W+ Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDEFIVLPEVISKEPLGPVVRRGDEDWFA 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 +V WT +AM+ AEE+G+T KN+ ++ T PD+ LG + N G+ L + DW +I Sbjct: 241 VVRWTLFAMLNAEEMGVTSKNVEALAAKPTTPDMAHLLGQEG--NYGKDLKVPNDWVVKI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++ +GNYGE FDRN+G SELKI RG NALW+ GGL YAPP+R Sbjct: 299 VKQVGNYGESFDRNVGMGSELKIKRGQNALWNNGGLQYAPPVR 341 >gi|24114551|ref|NP_709061.1| putative periplasmic binding transport protein [Shigella flexneri 2a str. 301] gi|24053744|gb|AAN44768.1| putative periplasmic binding transport protein [Shigella flexneri 2a str. 301] gi|281602643|gb|ADA75627.1| putative periplasmic binding transport protein [Shigella flexneri 2002017] Length = 341 Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats. Identities = 155/343 (45%), Positives = 231/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K ++ +L + +A + L ++K+GF++CGI+ GL F+ A+G + G Sbjct: 1 MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPRFSYADADGKFSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +G+AF Sbjct: 61 DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + +GD EW++ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GI +N+++ + + PD+ LG + + G+ L L W Y I Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKEG--DYGKDLKLDNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ + NY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 IKQVSNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341 >gi|163859070|ref|YP_001633368.1| putative extracellular solute-binding protein [Bordetella petrii DSM 12804] gi|163262798|emb|CAP45101.1| putative extracellular solute-binding protein [Bordetella petrii] Length = 338 Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats. Identities = 151/340 (44%), Positives = 226/340 (66%), Gaps = 4/340 (1%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 S++ +L A+ L ++KRG L+CG TG GF+ A G W+G DVD Sbjct: 2 KIARSLIGATLLLGAMAGAQAATLDVVQKRGELRCGTTTGFAGFSAPDAQGVWRGLDVDL 61 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 CRA+++A+F D +KI+ +PLN+++RF ALQS +ID+L+RNT T R+ +LG+ I + Sbjct: 62 CRAVAAAVFGDANKIKIVPLNSQQRFTALQSGEIDVLTRNTTVTQQRDTALGIIHAGINF 121 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 +DGQGF++ K G+ S ++L+GA+IC+Q GT+ E TLAD+ +AHN+ Y P+V E E+ Sbjct: 122 YDGQGFLVPKSLGVQSATELNGATICLQTGTSNENTLADWARAHNVSYKPVVIETFNEVV 181 Query: 184 AAYRAHRCDAYTGDISALYALKL-TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A+ + RCD ++ D S L ++++ P ++++LP+IISK PL P + QGD W N+V Sbjct: 182 NAFASGRCDVFSTDASGLASIRISKLQNPDDYLVLPEIISKEPLGPFVRQGDDAWLNVVH 241 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302 W+ AM+ AEE GIT N++Q + + NP+++R LG+ + G +GL + W Y II+ Sbjct: 242 WSLSAMIEAEEYGITSANVDQQLQ-SANPNIRRMLGV--TPGAGANMGLDEKWAYNIIKQ 298 Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGE F+RN+G S LKI RG NA W++GGLMYA PIR Sbjct: 299 VGNYGESFERNVGAGSPLKIKRGLNAQWTQGGLMYALPIR 338 >gi|84685382|ref|ZP_01013280.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Maritimibacter alkaliphilus HTCC2654] gi|84666539|gb|EAQ13011.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Rhodobacterales bacterium HTCC2654] Length = 338 Score = 424 bits (1091), Expect = e-117, Method: Composition-based stats. Identities = 160/342 (46%), Positives = 219/342 (64%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ L + F + S +A+ L D++ RG LKCG N+GL GFA ANG W+GFD Sbjct: 1 MKKSVFLGALTVA--GFVAGSASAATLDDVQARGSLKCGSNSGLTGFAAPDANGHWEGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ DP ++++P K RF AL S ++DIL RNT WTL R++ L F Sbjct: 59 VAVCRAVAAAVLGDPEAVEFVPTTPKTRFTALASGEVDILVRNTTWTLTRDVDLKFTFTG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGFI+ K G+SS +L GA++C+Q GTTTEL LAD+F+ +N+ Y P+ E Sbjct: 119 VNYYDGQGFIVPKALGVSSAKELDGATVCIQTGTTTELNLADFFRTNNISYEPVPIETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT D S L A + + + P++H ILP+IISK PL P + GD EW +I Sbjct: 179 EAQQQYLAGACDTYTTDASGLAATRASFENPADHAILPEIISKEPLGPLVRHGDDEWADI 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT A+V AEE GIT NI +++ T NP++ R LG + + +GE LGL DW + I Sbjct: 239 VRWTLNALVAAEEFGITSTNIEELASGTDNPEINRILGTEGT--MGEMLGLEADWAMKAI 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F++N+G + + + RG NA W GGL YAPP R Sbjct: 297 AAGGNYGEIFEKNIGESTPIGLARGLNAQWKDGGLQYAPPFR 338 >gi|126461167|ref|YP_001042281.1| cationic amino acid ABC transporter, periplasmic binding protein [Rhodobacter sphaeroides ATCC 17029] gi|126102831|gb|ABN75509.1| cationic amino acid ABC transporter, periplasmic binding protein [Rhodobacter sphaeroides ATCC 17029] Length = 338 Score = 424 bits (1091), Expect = e-117, Method: Composition-based stats. Identities = 149/342 (43%), Positives = 219/342 (64%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ L + + +A+ L D+K RG L CG++TGL GF+ ANG+W GFD Sbjct: 1 MTKSVFLGTLTVAG--LAAGLASAATLDDVKARGELNCGVSTGLTGFSLPDANGNWTGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ D +K++++P + RF AL S ++D+L+RN+ WT R+ L L F Sbjct: 59 VSLCRAVAAAVLGDGTKVKFVPTTGQTRFTALASGEVDMLARNSTWTFSRDTDLKLDFVG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K G++S +L GA++C+Q GTTTEL LAD+FK +N+ Y P+ E Sbjct: 119 VNYYDGQGFMVRKDLGVTSAKELDGATVCIQTGTTTELNLADWFKVNNLSYTPVAVETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + Y A CDAYT D S L A + P H+ILP+IISK PL PA+ GD EW +I Sbjct: 179 EGEQQYAAGACDAYTTDASGLAATRAAFADPENHIILPEIISKEPLGPAVRHGDNEWADI 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT A++ AEE G+T N+ +++ ++ NP++QR LG+ ++G+ + L DW R I Sbjct: 239 VRWTLNALIAAEEYGVTSANMEELAANSPNPEIQRVLGVQG--DLGKMIRLDNDWAKRAI 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F +G + + + RG NA W++GGL+YAPP R Sbjct: 297 AVGGNYGEIFAATIGEATPIGLARGLNAQWTQGGLLYAPPFR 338 >gi|254504317|ref|ZP_05116468.1| hypothetical protein SADFL11_4356 [Labrenzia alexandrii DFL-11] gi|222440388|gb|EEE47067.1| hypothetical protein SADFL11_4356 [Labrenzia alexandrii DFL-11] Length = 338 Score = 424 bits (1091), Expect = e-117, Method: Composition-based stats. Identities = 156/341 (45%), Positives = 228/341 (66%), Gaps = 3/341 (0%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K+ F S+ +F +AS L +K+ G+ CG++ G GF+ ++G+W G DV Sbjct: 1 MKNTFKSLAVAAAFSGAAFPASASTLERVKENGYFTCGVSQGNPGFSNPDSDGNWSGLDV 60 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D+CRA+++A+ DP+ +++ PL++ ERF ALQS +ID+LSR T WT+ R+ +LG F + Sbjct: 61 DYCRAIAAAVLGDPAAVKFRPLSSPERFTALQSGEIDVLSRTTTWTMSRDTNLGANFAGV 120 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y+DGQ ++ K+ GI+S +L+GAS+C GTTTEL +AD+F+ +NM+Y + FE+ +E Sbjct: 121 MYYDGQAMMVRKELGITSAMELAGASVCTATGTTTELNVADFFRVNNMEYEVVAFEKNDE 180 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + AY A RCD YT D S L+A +L PSEH+ILP++ISK PL P + QGD +W NI Sbjct: 181 VTQAYDAGRCDVYTTDKSGLHANRLKLTNPSEHMILPEVISKEPLGPVVRQGDDQWLNIA 240 Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301 WT ++ AEELG+TQ N+ + + + NP V+R +G++ N G ALGL +DW RII Sbjct: 241 KWTLNVLINAEELGVTQANVADM-ESSDNPAVKRLIGVEG--NFGGALGLDQDWAVRIIS 297 Query: 302 HMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGE+F RN+G + L I RG NA W GG +YAPP+R Sbjct: 298 AVGNYGEIFVRNVGVDTPLGIERGLNASWIDGGTLYAPPVR 338 >gi|238752136|ref|ZP_04613618.1| Extracellular solute-binding protein, family 3 [Yersinia rohdei ATCC 43380] gi|238709609|gb|EEQ01845.1| Extracellular solute-binding protein, family 3 [Yersinia rohdei ATCC 43380] Length = 341 Score = 424 bits (1090), Expect = e-116, Method: Composition-based stats. Identities = 159/343 (46%), Positives = 230/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K +++ L + +A L +KK+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKIMISTLVAAASLVALAGQAHAGTTLDAVKKKGFVQCGISDGLPGFSYADASGKFSGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CRA+++AIF D K++Y PL AKERF ALQS ++DILSRNT WT R+ +G+ F Sbjct: 61 DVDICRAVAAAIFGDAEKVKYTPLTAKERFTALQSGEVDILSRNTTWTSSRDAGMGMLFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Y+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+ M+Y P+ F+R Sbjct: 121 GVNYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMQYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ +P+E ++LP++ISK PL P + +GD +W+ Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPTEFIVLPEVISKEPLGPVVRRGDEDWFA 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 +V WT +AM+ AEE+G+T +N+ ++ T PD+ LG + N G+ L + DW +I Sbjct: 241 LVRWTLFAMLNAEEMGVTSQNVEALAAKPTTPDMAHLLGQEG--NYGKDLKVPNDWVVKI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++ +GNYGE F+RN+G SELKI RG NALW+ GGL YAPP+R Sbjct: 299 VKQVGNYGESFERNVGMGSELKIKRGQNALWNNGGLQYAPPVR 341 >gi|238789893|ref|ZP_04633673.1| Extracellular solute-binding protein, family 3 [Yersinia frederiksenii ATCC 33641] gi|238721966|gb|EEQ13626.1| Extracellular solute-binding protein, family 3 [Yersinia frederiksenii ATCC 33641] Length = 341 Score = 424 bits (1090), Expect = e-116, Method: Composition-based stats. Identities = 161/343 (46%), Positives = 229/343 (66%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K +++ L + +A L +KK+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKIMISTLVAAASLVALAGQAHAGTTLDAVKKKGFVQCGISDGLPGFSYADASGKFSGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++AIF D K++Y PL AKERF ALQS ++DILSRNT WT R+ +G+ F Sbjct: 61 DVDVCRGVAAAIFGDAEKVKYTPLTAKERFTALQSGEVDILSRNTTWTSSRDAGMGMLFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Y+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+ M+Y P+ F+R Sbjct: 121 GVNYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMQYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ +P E ++LP++ISK PL P + +GD +W+ Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDEFIVLPEVISKEPLGPVVRRGDEDWFA 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+G+T KN+ ++ + PD+ LG + N G+ L + DW +I Sbjct: 241 IVRWTLFAMLNAEEMGVTSKNVEALAAKPSTPDMAHLLGQEG--NYGKDLKVPNDWVVKI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++ +GNYGE FDRN+G SELKI RG NALW+KGGL YAPP+R Sbjct: 299 VKQVGNYGESFDRNVGMGSELKIKRGQNALWNKGGLQYAPPVR 341 >gi|238782940|ref|ZP_04626968.1| Extracellular solute-binding protein, family 3 [Yersinia bercovieri ATCC 43970] gi|238716143|gb|EEQ08127.1| Extracellular solute-binding protein, family 3 [Yersinia bercovieri ATCC 43970] Length = 341 Score = 424 bits (1090), Expect = e-116, Method: Composition-based stats. Identities = 162/343 (47%), Positives = 228/343 (66%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K +++ L + +A L +KK+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKTIISTLVAAASLVALAGQAHAGTTLDAVKKKGFVQCGISDGLPGFSYADASGKFSGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++AIF D K++Y PL AKERF ALQS ++DILSRNT WT R+ +G+ F Sbjct: 61 DVDVCRGVAAAIFGDAEKVKYTPLTAKERFTALQSGEVDILSRNTTWTSSRDAGMGMLFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Y+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+ M+Y P+ F+R Sbjct: 121 GVNYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMQYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ +P E ++LP++ISK PL P + +GD +W+ Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDEFIVLPEVISKEPLGPVVRRGDEDWFA 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+G+T KN+ ++ T PD+ LG + N G+ L + DW +I Sbjct: 241 IVRWTLFAMLNAEEMGVTSKNVEALAAKPTTPDMAHLLGQEG--NYGKDLKVPNDWVVKI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++ +GNYGE FDRN+G SELKI RG NALW+ GGL YAPPIR Sbjct: 299 VKQVGNYGESFDRNVGMGSELKIKRGQNALWNSGGLQYAPPIR 341 >gi|303256337|ref|ZP_07342353.1| general amino acid ABC transporter, periplasmic binding protein [Burkholderiales bacterium 1_1_47] gi|302861066|gb|EFL84141.1| general amino acid ABC transporter, periplasmic binding protein [Burkholderiales bacterium 1_1_47] Length = 340 Score = 424 bits (1090), Expect = e-116, Method: Composition-based stats. Identities = 149/342 (43%), Positives = 227/342 (66%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + L + L + + +L +K + CG+NT GF+ + G+W G D Sbjct: 1 MNQTILAGALSAVSLSLAAPAFAGPVLDKVKANDVVVCGVNTAAPGFSNADSKGNWTGLD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+CRAL++A+ D +K++++PLN+ +RF ALQ+ ++D+L+RNT W L R+ SLG F Sbjct: 61 VDYCRALAAAVLADANKVKFVPLNSPQRFSALQAGEVDVLARNTTWNLTRDASLGAVFVG 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+DGQGF++ KK + S QL+GA+ICVQ+GT++E ++ADYFK+H MKY ++F+ E Sbjct: 121 TNYYDGQGFLVPKKLNVKSAKQLNGATICVQSGTSSEPSVADYFKSHGMKYKAVLFDTTE 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A+ + RC YT D+S L + P ++VILP++ISK PL P++ +GD EW+ I Sbjct: 181 ATQGAFLSGRCQVYTTDMSDLAGARTKAANPDDYVILPEVISKEPLGPSVRRGDNEWFQI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 W A + AEE GITQ N +++ K +T+P+V+R LG ++G+ LGL KDW+YRI+ Sbjct: 241 ARWVLNAFIEAEEKGITQANADELRKTSTDPNVKRLLG--SGEDMGKLLGLDKDWSYRIV 298 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE F+RNLG ++ L +PRG N W+ GG++YAPP+R Sbjct: 299 KQVGNYGESFERNLGPKTPLALPRGINNQWTNGGILYAPPVR 340 >gi|328543624|ref|YP_004303733.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Polymorphum gilvum SL003B-26A1] gi|326413367|gb|ADZ70430.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Polymorphum gilvum SL003B-26A1] Length = 300 Score = 423 bits (1089), Expect = e-116, Method: Composition-based stats. Identities = 161/302 (53%), Positives = 219/302 (72%), Gaps = 3/302 (0%) Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 + GL GF+ A G+W G DVD CRA+++A+F D S +++ PL+AKERF ALQS +IDIL Sbjct: 2 SQGLPGFSNPDAQGNWTGLDVDVCRAVAAAVFGDASAVKFTPLSAKERFTALQSGEIDIL 61 Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 SRNT WT+ R+ SLGL F +TY+DGQGF++ K G++S +LSGAS+C GTTTEL + Sbjct: 62 SRNTTWTMSRDTSLGLNFAGVTYYDGQGFMVRKALGVTSALELSGASVCTNTGTTTELNV 121 Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220 ADYF+ +NM Y + FE+ +E+ AY A RCD +T D S LYA +L P +H++LP+I Sbjct: 122 ADYFRTNNMPYEIVAFEKSDEVVQAYDAGRCDVFTTDASGLYAERLKLSNPGDHMVLPEI 181 Query: 221 ISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGID 280 ISK PL P + QGD +W+NI WT AM+ AEELG+T N++++ K + NP+++R LGI+ Sbjct: 182 ISKEPLGPVVRQGDDQWFNIARWTLNAMINAEELGVTSANVDEM-KSSENPEIKRLLGIE 240 Query: 281 KSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPP 340 + GE + L+ DW Y II+ +GNYGE FDRN+G + L I RG NALWSKGG++YAPP Sbjct: 241 GA--FGEGVSLSNDWAYNIIKQVGNYGEAFDRNVGPDTPLGIARGLNALWSKGGILYAPP 298 Query: 341 IR 342 IR Sbjct: 299 IR 300 >gi|149203333|ref|ZP_01880303.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Roseovarius sp. TM1035] gi|149143166|gb|EDM31205.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Roseovarius sp. TM1035] Length = 339 Score = 423 bits (1089), Expect = e-116, Method: Composition-based stats. Identities = 155/343 (45%), Positives = 220/343 (64%), Gaps = 5/343 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ L + + ++ A+ L D+K RG L CG+ TGLVGFA ANG W+GFD Sbjct: 1 MKKTVFLG--ALTVAGLAAGASAAATLDDVKARGKLNCGVTTGLVGFAAPDANGVWEGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ D + ++++P K RF AL S +ID+L+RNT WT R+ L F Sbjct: 59 VAICRAVAAAVLGDGNAVEFVPTTGKTRFTALASGEIDLLARNTTWTFSRDTDLKFDFVG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K G+SS +L GA++C+Q GTTTEL LAD+F+A+N+ Y P+ E Sbjct: 119 VNYYDGQGFLVPKSLGVSSAKELDGATVCIQTGTTTELNLADFFRANNISYEPVPIETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT D S L + + + P +HVILP+IISK PL P + GD +W +I Sbjct: 179 EGQQQYLAGACDTYTTDASGLASTRAAFENPGDHVILPEIISKEPLGPLVRHGDNDWGDI 238 Query: 241 VSWTHYAMVTAEELGITQKNINQV-SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 V WT YA+V AEE+GIT NI ++ + NP++ R LG + +G +GL DW R Sbjct: 239 VRWTFYALVAAEEMGITSANIGELSAAAGANPEINRILGTEGE--LGAMIGLDNDWAKRA 296 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I GNYGE+F++N+G ++ + + RG NA W++GG+MYAPP R Sbjct: 297 ISVGGNYGEIFEKNIGEKTPIGLARGLNAQWTQGGIMYAPPFR 339 >gi|51245286|ref|YP_065170.1| amino acid ABC transporter, periplasmic substrate-binding protein [Desulfotalea psychrophila LSv54] gi|50876323|emb|CAG36163.1| probable amino acid ABC transporter, periplasmic substrate-binding protein [Desulfotalea psychrophila LSv54] Length = 339 Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats. Identities = 164/339 (48%), Positives = 235/339 (69%), Gaps = 6/339 (1%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 + L ++L T +A+ L +K++G++ G++ ++GF+ + G W+G DVDF Sbjct: 7 RLVGAALGSLLLAST---VSATTLDVVKEKGYVNAGVSGKVIGFSAPDSQGVWRGMDVDF 63 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 RA++SAIFDDP+K ++ P+ KE F ALQS +I+IL+RNT WT R+ LGL F + Sbjct: 64 VRAVASAIFDDPNKARFTPVAFKEAFAALQSGEIEILARNTTWTFQRDTKLGLEFVGPLF 123 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 +DGQGF++HK G+ S +L GAS+C Q+GTTTEL +ADYF +H M Y P+V+E +E Sbjct: 124 YDGQGFLVHKDLGVKSALELDGASVCTQSGTTTELNMADYFASHGMTYLPVVYESADEAT 183 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 Y RCD YT D SAL A + P +H ILP+IISK PL PA+ QGD +W ++V W Sbjct: 184 VIYDTGRCDVYTTDSSALAARRTILSNPDDHEILPEIISKEPLGPAVRQGDQQWSDLVRW 243 Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHM 303 T +A++T EELGIT +N++Q+ + N +V+RFLG+D + G+ +GL+ DW YRII+H+ Sbjct: 244 TLFALITGEELGITSENVDQML-TSENTEVKRFLGVDS--DFGQHIGLSHDWAYRIIKHV 300 Query: 304 GNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNY E+F+RN+G+Q+ L + RG NALW+ GGLMYAPPIR Sbjct: 301 GNYSEVFERNVGSQTALGLDRGLNALWTNGGLMYAPPIR 339 >gi|319793876|ref|YP_004155516.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] gi|315596339|gb|ADU37405.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] Length = 344 Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats. Identities = 154/346 (44%), Positives = 227/346 (65%), Gaps = 6/346 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTN---ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M F +++ L + + L +K+RG +KCG+ G+ GF+ G+W Sbjct: 1 MKNRFRPALIAAASLVAFATAAPAFAGKTLDAVKQRGTVKCGVTNGVAGFSAPDTQGNWS 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G DVD CRA+++A+ D K+ ++PLN+++RF ALQ+ +IDIL+RNT WTL R+ SLG Sbjct: 61 GLDVDTCRAIAAAVLGDAKKVDFVPLNSQQRFSALQAGEIDILARNTTWTLTRDASLGFN 120 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F ITY+DGQGF++ KK ++S QL A+IC Q+GTT E ++DYF+A N+ +VFE Sbjct: 121 FTTITYYDGQGFLVPKKLKVTSAKQLKNATICTQSGTTNEKNVSDYFRAQNIPVKTVVFE 180 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALK-LTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E A+ + RC A+T D SAL L+ P +++ILP++ISK PLAP + +GD E Sbjct: 181 SFEASFKAFFSGRCQAFTTDASALAGLRNKEAPNPDDYIILPELISKEPLAPLVRRGDDE 240 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWT 296 W+ I W A++ AEE G+TQ N +++ + +P QR +G ++G+ LGL KDW+ Sbjct: 241 WFAIAKWVPNALIEAEEAGVTQANADELKASSKDPAQQRLVGT--GEDLGKLLGLDKDWS 298 Query: 297 YRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +R I+ +GNYGE+F+RN+G +S LK+PRG N LWSKGGL+YAPP+R Sbjct: 299 FRAIKAVGNYGEVFERNVGPKSVLKLPRGSNNLWSKGGLIYAPPVR 344 >gi|209966385|ref|YP_002299300.1| general L-amino acid-binding periplasmic protein AapJ [Rhodospirillum centenum SW] gi|209959851|gb|ACJ00488.1| general L-amino acid-binding periplasmic protein AapJ [Rhodospirillum centenum SW] Length = 353 Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats. Identities = 159/321 (49%), Positives = 223/321 (69%), Gaps = 5/321 (1%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 S L IK+RG L+CG+NTGL GF+ + G W G DVD C+A+++A D K+ Y P Sbjct: 37 QQSTLDQIKQRGVLRCGVNTGLAGFSTPDSQGRWTGLDVDVCKAIAAAALGDAGKVHYAP 96 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 L+A++R ALQS ++DILSRNT W+L R+ G+ F P+ Y+DGQGF++ K G++S Q Sbjct: 97 LSAQQRLTALQSGEVDILSRNTTWSLSRDTQ-GMNFGPVVYYDGQGFMVPKALGVTSAKQ 155 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL- 201 L GA++CVQ GTTTEL LADYF A+ M + P+V E +E+ AA+ + RCD +T D S L Sbjct: 156 LDGATVCVQTGTTTELNLADYFAANRMSFKPVVIESFDEVVAAFFSGRCDVFTTDGSQLA 215 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 ++ P ++VILP+IISK PLAP + GD +W++IV WT YA++ AEE GIT N+ Sbjct: 216 SVRAVSAAAPDDYVILPEIISKEPLAPVVRHGDDQWFDIVKWTVYALLEAEEKGITAANV 275 Query: 262 NQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELK 321 ++ K + +P VQR LG+ +G++LGL W YR I+ +GNYGE+F+RN+G + L+ Sbjct: 276 DE-KKKSADPTVQRLLGV--QPGMGQSLGLDDAWAYRAIKAVGNYGEVFERNVGKATPLR 332 Query: 322 IPRGYNALWSKGGLMYAPPIR 342 + RG NALW+ GGLMYAPP+R Sbjct: 333 LERGLNALWTNGGLMYAPPVR 353 >gi|260772752|ref|ZP_05881668.1| amino acid ABC transporter amino acid-binding protein [Vibrio metschnikovii CIP 69.14] gi|260611891|gb|EEX37094.1| amino acid ABC transporter amino acid-binding protein [Vibrio metschnikovii CIP 69.14] Length = 340 Score = 423 bits (1087), Expect = e-116, Method: Composition-based stats. Identities = 170/339 (50%), Positives = 230/339 (67%), Gaps = 5/339 (1%) Query: 6 FVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 +++C + L T+ AS L + +G L CGI+TGL GF++ A G W+G DVD+ Sbjct: 5 LATLVCAVSLSLTTHLAFASPTTLDRVLTQGKLTCGISTGLAGFSDADAKGQWQGLDVDY 64 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 CRAL++A+ D +K++Y+PL A+ERF ALQS Q+D+LSRNT WT R+ ++GL F + + Sbjct: 65 CRALAAAVLGDKNKVEYVPLTARERFNALQSGQVDVLSRNTTWTFERDTTMGLNFVGVNF 124 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 +DGQGF++ KK I+ VSQL+ ICVQ+ TTT+L L DYF+ H M Y P+VF+ +I Sbjct: 125 YDGQGFMVTKKSAITQVSQLNNRPICVQSETTTKLNLDDYFRHHGMSYQPVVFDTAIQIA 184 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 A+ A RC A T D S LYAL+L +P +ILP+IISK PL P I +GD W NI W Sbjct: 185 RAFNAERCVAVTADKSGLYALRLNLAKPDSAIILPEIISKEPLGPVIREGDDRWLNITRW 244 Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHM 303 T AM+ AEELGIT N++Q K +TNP+++R LG++ IG LG+ DW Y+II+ + Sbjct: 245 TLAAMINAEELGITSANVDQQRK-STNPEIRRLLGVEGE--IGRPLGINNDWAYQIIKQV 301 Query: 304 GNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNY E F RN+G S L IPRG NALW+ GG+MYA PIR Sbjct: 302 GNYSESFQRNVGEDSPLAIPRGLNALWNAGGIMYATPIR 340 >gi|307546909|ref|YP_003899388.1| ABC transporter periplasmic protein [Halomonas elongata DSM 2581] gi|307218933|emb|CBV44203.1| ABC-type transport system periplasmic substrate-binding protein [Halomonas elongata DSM 2581] Length = 342 Score = 423 bits (1087), Expect = e-116, Method: Composition-based stats. Identities = 163/339 (48%), Positives = 224/339 (66%), Gaps = 2/339 (0%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 V++ + T+ S +A+ L ++K+RG L CG+N GL GF+ +G W+G DV+ Sbjct: 6 KALVALSLATLALGTAASASAATLDEVKERGELHCGVNVGLAGFSSSDEDGTWQGLDVET 65 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 CRA+SSAIF DP K+ + PL AKERF ALQS +ID+LSRNT WT R+ SLGL F T+ Sbjct: 66 CRAVSSAIFGDPEKVAFTPLTAKERFTALQSGEIDVLSRNTTWTATRDNSLGLNFTATTF 125 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 +DGQGF++ K+ GI S+ L GASIC+Q+GTT EL LADYF + N+ + F+ ++ Sbjct: 126 YDGQGFMVDKELGIESLEDLDGASICIQSGTTHELNLADYFPSRNIDIKTVTFDTPDQTA 185 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 + + RCD T D S L AL+L P IL ++ISK PL P + QGD +W+NI+ W Sbjct: 186 QGFASGRCDVLTSDTSQLSALRLQLPEPDSVEILTELISKEPLGPVVRQGDDQWFNIIKW 245 Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHM 303 T +AMV AEE+G+ N++++ +D NP V R LG+D + GE LGL DW Y II + Sbjct: 246 TIFAMVNAEEMGVNSDNVDEMKQDPPNPGVARLLGVDGT--YGEQLGLGNDWAYNIISQV 303 Query: 304 GNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F +G S L I RG NALW++GG++YAPP+R Sbjct: 304 GNYGEVFADTVGENSPLGISRGMNALWNEGGILYAPPVR 342 >gi|238794642|ref|ZP_04638248.1| Extracellular solute-binding protein, family 3 [Yersinia intermedia ATCC 29909] gi|238726031|gb|EEQ17579.1| Extracellular solute-binding protein, family 3 [Yersinia intermedia ATCC 29909] Length = 341 Score = 423 bits (1087), Expect = e-116, Method: Composition-based stats. Identities = 160/343 (46%), Positives = 228/343 (66%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K +++ L + +A L +KK+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKIMISTLVAAASLVALAGQAHAGTTLDAVKKKGFVQCGISDGLPGFSYADASGKFSGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D K++Y PL AKERF ALQS ++DILSRNT WT R+ +G+ F Sbjct: 61 DVDVCRGVAAAVFGDAEKVKYTPLTAKERFTALQSGEVDILSRNTTWTSSRDAGMGMLFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Y+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+ M+Y P+ F+R Sbjct: 121 GVNYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMQYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ +P E ++LP++ISK PL P + +GD +W+ Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDEFIVLPEVISKEPLGPVVRRGDEDWFA 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+G+T KN+ ++ T PD+ LG + N G+ L + DW +I Sbjct: 241 IVRWTLFAMLNAEEMGVTSKNVEALAAKPTTPDMAHLLGQEG--NYGKDLKVPNDWVVKI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++ +GNYGE FDRN+G SELKI RG NALW+ GGL YAPP+R Sbjct: 299 VKQVGNYGESFDRNVGLGSELKIKRGQNALWNNGGLQYAPPVR 341 >gi|239815922|ref|YP_002944832.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] gi|239802499|gb|ACS19566.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] Length = 344 Score = 423 bits (1087), Expect = e-116, Method: Composition-based stats. Identities = 154/320 (48%), Positives = 220/320 (68%), Gaps = 3/320 (0%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 L +K+RG +KCG+ G+ GF+ G+W G DVD CRA+++A+ DP K+ ++PL Sbjct: 27 GKTLDAVKQRGTVKCGVTNGVAGFSAPDTQGNWSGLDVDTCRAIAAAVLGDPKKVDFVPL 86 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 N+++RF ALQ+ +IDIL+RNT WTL R+ SLG F ITY+DGQGF++ KK ++S QL Sbjct: 87 NSQQRFSALQAGEIDILARNTTWTLTRDASLGFNFTTITYYDGQGFLVPKKLKVTSAKQL 146 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 A+IC Q+GTT E ++DYF+A N+ +VFE E A+ + RC A+T D SAL Sbjct: 147 KNATICTQSGTTNEKNVSDYFRAQNIPVKTVVFESFEASFKAFFSGRCQAFTTDASALAG 206 Query: 204 LK-LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 L+ P ++VILP++ISK PLAP + +GD EW+ I W A++ AEE G+TQ N + Sbjct: 207 LRNKEAPNPDDYVILPELISKEPLAPLVRRGDDEWFAIAKWVPNALIEAEEFGVTQANAD 266 Query: 263 QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKI 322 ++ + +P QR LG ++G+ LGL KDW++R I+ +GNYGEMF+RN+G +S LK+ Sbjct: 267 ELKAGSKDPAQQRLLGA--GEDLGKLLGLDKDWSFRAIKAVGNYGEMFERNVGPKSVLKL 324 Query: 323 PRGYNALWSKGGLMYAPPIR 342 PRG N LW+KGGL+YAPP+R Sbjct: 325 PRGSNNLWNKGGLIYAPPVR 344 >gi|254439839|ref|ZP_05053333.1| lysine-arginine-ornithine-binding periplasmic protein [Octadecabacter antarcticus 307] gi|198255285|gb|EDY79599.1| lysine-arginine-ornithine-binding periplasmic protein [Octadecabacter antarcticus 307] Length = 338 Score = 423 bits (1087), Expect = e-116, Method: Composition-based stats. Identities = 153/342 (44%), Positives = 215/342 (62%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + L I + + A L D+K RG L CG+ TGLVGFA ANG W+GFD Sbjct: 1 MKNSVLLG--ALTIAGLAAGAAAAGTLDDVKARGTLNCGVTTGLVGFAAPDANGVWEGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRAL++A+ DP ++++P + RF AL S +ID L+RNT WT R++ L F Sbjct: 59 VGVCRALAAAVLGDPMAVEFVPTTGQTRFTALASGEIDFLARNTTWTFSRDVDLKFEFTG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 I Y+DGQGF++ ++ G+SS L GA++C+Q GTTTEL LADYF+++N+ Y P+ E Sbjct: 119 INYYDGQGFMVPRELGVSSAKDLDGATVCIQTGTTTELNLADYFRSNNISYEPVPIETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT D S L A + T + P +HV+LP+IISK PL P + GD EW ++ Sbjct: 179 EGQQQYLAGACDTYTTDASGLAATRATFENPGDHVLLPEIISKEPLGPLVRHGDNEWADV 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 WT A++ AEELG+T NI +++ T NP++ R LG + +G LGL DW I Sbjct: 239 ARWTLNALIAAEELGVTSANIAELANGTDNPEINRLLGTEGE--LGAMLGLEADWAKNAI 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F++N+G + + + RG NA+W++GGL+Y+PP R Sbjct: 297 MAGGNYGELFEKNIGENTPIGLARGLNAMWTEGGLIYSPPFR 338 >gi|317401305|gb|EFV81945.1| amino acid-binding periplasmic protein [Achromobacter xylosoxidans C54] Length = 338 Score = 422 bits (1086), Expect = e-116, Method: Composition-based stats. Identities = 147/336 (43%), Positives = 227/336 (67%), Gaps = 4/336 (1%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 ++ +L + A+ L +++RG + CG TG GF+ A G W+G DVD CRA+ Sbjct: 6 GLVGAALLLAVAQGAQAATLDVVRQRGAVACGTTTGFAGFSAPDAQGKWQGLDVDLCRAI 65 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 ++A+F D +KI+ +PLN+++RF ALQS ++D+L+RNT T R+ +LG+ I ++DGQ Sbjct: 66 AAAVFGDANKIKVVPLNSQQRFTALQSGEVDVLTRNTTVTQQRDTALGIIHAGINFYDGQ 125 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 GF++ K G+ S +++GA+IC+Q GT+ E TLAD+ +A+N+ Y P+V E E+ A+ Sbjct: 126 GFLVPKSLGVKSAKEINGATICLQTGTSNENTLADWARANNVTYKPVVIETFNEVVNAFA 185 Query: 188 AHRCDAYTGDISALYALKL-TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 A RCD ++ D S L ++++ P ++V+LP+IISK PL P + QGD W NIV W+ Sbjct: 186 AGRCDVFSTDASGLASIRISKLQNPDDYVVLPEIISKEPLGPFVRQGDDAWLNIVRWSLS 245 Query: 247 AMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNY 306 AM+ AEE G+T +N+++ +K ++NP+++R LG+ + G LGL + W Y I++ +GNY Sbjct: 246 AMIEAEEYGVTSRNVDEQAK-SSNPNIKRILGV--TPGGGANLGLDEKWAYNIVKQVGNY 302 Query: 307 GEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GE F+RN+G S LKI RG NA W++GGLMYA PIR Sbjct: 303 GESFERNVGQGSPLKIKRGLNAQWTQGGLMYALPIR 338 >gi|119946447|ref|YP_944127.1| ABC amino acid transporter extracellular solute-binding protein, family 3 [Psychromonas ingrahamii 37] gi|119865051|gb|ABM04528.1| ABC amino acid transporter extracellular solute-binding protein, family 3 [Psychromonas ingrahamii 37] Length = 337 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 164/321 (51%), Positives = 229/321 (71%), Gaps = 3/321 (0%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 +AS L ++ K+G + CGI+TG+ GF+ + G W+G DVDFC+++++A+F D SK++Y+ Sbjct: 20 ASASTLEEVVKKGDINCGISTGIAGFSSTDSKGVWEGLDVDFCKSVAAAVFGDASKVKYI 79 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 PL AKERF ALQS +ID+LSR T WT R+ SLGL F + Y+DGQGF+++KK GISS Sbjct: 80 PLTAKERFTALQSGEIDVLSRATTWTATRDTSLGLNFAGVNYYDGQGFLVNKKLGISSAK 139 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 +LSGA+ C+QAGTT+EL L DYF+++NM+Y + ++ + +++ RCD T D S L Sbjct: 140 ELSGATFCIQAGTTSELNLTDYFQSNNMEYRAVTYDTSGQTVNGFKSGRCDVITSDASQL 199 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 Y LKL D P ++LP+IISK PL P + QGD EW+NIV WT +A + AEELG++ N+ Sbjct: 200 YGLKLKLDDPDSAIVLPEIISKEPLGPVVRQGDDEWFNIVRWTMFATLEAEELGVSSANV 259 Query: 262 NQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELK 321 + + K + NP + R LG KS GE LGL DW Y+I++ +GNYGEMFD+N+G S L Sbjct: 260 DAMLK-SENPSIMRLLG--KSGTAGENLGLKGDWVYQIVKQVGNYGEMFDKNVGKDSPLN 316 Query: 322 IPRGYNALWSKGGLMYAPPIR 342 I RG N LW++GGLMY+ PIR Sbjct: 317 IDRGLNKLWNQGGLMYSMPIR 337 >gi|330429782|gb|AEC21116.1| putative extracellular solute-binding protein [Pusillimonas sp. T7-7] Length = 338 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 149/343 (43%), Positives = 223/343 (65%), Gaps = 6/343 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + +L + + +A L +K+RG + CG+ TG GF+ A G W+G D Sbjct: 1 MRK--FKYVAGAAVLAASFSAAHADTLDVVKERGVVHCGVTTGFAGFSAPDAKGVWQGLD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD CRA+++A D K + +PL++++RF ALQS +ID+L+RNT T R+ +LG Sbjct: 59 VDLCRAVAAATLGDAEKFKAVPLSSQQRFTALQSGEIDLLARNTTVTQQRDTALGAISAG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + ++DGQGF++ K G+SS +L GAS+C+Q GT+ E T+AD+ +A+N+ Y P+V E+ Sbjct: 119 VNFYDGQGFLVPKSLGVSSAKELDGASVCMQTGTSNENTMADWARANNITYKPVVIEQFN 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKL-TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E+ A+ A RCD +T D S L ++++ P ++ +LP+IISK PL P + QGD W N Sbjct: 179 EVVNAFAAGRCDVFTTDASGLASIRISKLSNPDDYQVLPEIISKEPLGPFVRQGDDRWLN 238 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 +V W+ AM+ AEELGIT N+++ K + NP+V+R LG+ + G+ LG+ + W Y I Sbjct: 239 VVKWSLQAMIGAEELGITSANVDEQLK-SENPNVKRLLGV--TEGAGKNLGVDEKWAYNI 295 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNYGE FDRN+G S L+I RG NA W+ GGLMY P+R Sbjct: 296 IKQVGNYGESFDRNVGKGSPLQIERGLNAQWTDGGLMYGLPVR 338 >gi|294084021|ref|YP_003550778.1| glutamate/glutamine/aspartate/asparagine ABC transporter periplasmic substrate-binding protein [Candidatus Puniceispirillum marinum IMCC1322] gi|292663593|gb|ADE38694.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 338 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 156/323 (48%), Positives = 209/323 (64%), Gaps = 2/323 (0%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 + AS L D+K RG +KC +TGL GFA G+W GFDVDFCRA ++A+ D KI Sbjct: 18 STAQASTLEDVKSRGEVKCVFSTGLAGFAFPDDKGNWTGFDVDFCRATAAAVLGDAQKIG 77 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P + RF L + + D+L RNT T R++ + L F + Y+DGQGF+ K GISS Sbjct: 78 PVPATTQNRFTVLNAGEADVLWRNTTITFSRDVGVKLTFLGVNYYDGQGFMAKKSLGISS 137 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 +L GAS+C+Q GTTTEL LADYF+++NM Y + E Y + R D T D S Sbjct: 138 ALELDGASVCIQTGTTTELNLADYFRSNNMTYEAVPVADSAEARECYNSGRGDVLTTDAS 197 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 AL + + + P +H++LP+IISK PL PA+ QGD EW +IV W YA +TAEELGITQ Sbjct: 198 ALSSQRAAMENPDDHMVLPEIISKEPLGPAVRQGDDEWADIVRWVLYATITAEELGITQA 257 Query: 260 NINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSE 319 N+N + T NP+++RFLG++ N+G LGL+ DW II +GNYGE+F+RN+G + Sbjct: 258 NVNTIGATTNNPEIKRFLGLEA--NLGPELGLSNDWAKNIIAQVGNYGEIFERNIGVNTP 315 Query: 320 LKIPRGYNALWSKGGLMYAPPIR 342 L I RG NALW+ GGL Y+PP R Sbjct: 316 LGIGRGVNALWTDGGLQYSPPFR 338 >gi|222526721|ref|YP_002571192.1| extracellular solute-binding protein family 3 protein [Chloroflexus sp. Y-400-fl] gi|222450600|gb|ACM54866.1| extracellular solute-binding protein family 3 [Chloroflexus sp. Y-400-fl] Length = 389 Score = 421 bits (1084), Expect = e-116, Method: Composition-based stats. Identities = 148/328 (45%), Positives = 219/328 (66%), Gaps = 4/328 (1%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTG-LVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 T+ + I RG L CG+N L GFA V + G ++GFD+DFCRA+++A+FDD Sbjct: 65 GTTNQPAAGGQIERILSRGTLICGVNNNPLPGFASVDSAGVYRGFDIDFCRAVAAALFDD 124 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 P+K+++ PL+A+ERF ALQS +ID+L RN+ WTL R+ +LGL + P T++DGQG ++ K Sbjct: 125 PTKVEFRPLSAQERFTALQSGEIDVLIRNSTWTLGRDGTLGLDWAPTTFYDGQGMMVRKD 184 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 GI ++ + GA+ICVQ GTTTEL LAD F+A + + P+VF + AAY A +CD + Sbjct: 185 SGIETLEDMDGATICVQTGTTTELNLADQFRARGLTFTPVVFPDGDATRAAYDAGQCDGF 244 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 T D S L + P++H IL +SK PL PA+ QGD +W++ V W +A AEE Sbjct: 245 TTDKSGLISSLTLLTNPADHKILDVTMSKEPLGPAVRQGDPQWFDAVRWIVFATFQAEEY 304 Query: 255 GITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNL 314 GIT +N++Q + P+++RFLGI+ +G +GL D+ R++RH+GNY E+++RNL Sbjct: 305 GITSQNLDQFLG-SDVPEIRRFLGIEGE--LGAGIGLPNDFAARVVRHVGNYAEIYNRNL 361 Query: 315 GNQSELKIPRGYNALWSKGGLMYAPPIR 342 G + +PRG NAL+++GGL+Y+PP R Sbjct: 362 GPDTPFNLPRGLNALYTEGGLLYSPPFR 389 >gi|187479528|ref|YP_787553.1| L-amino acid ABC transporter substrate-binding protein [Bordetella avium 197N] gi|115424115|emb|CAJ50668.1| L-amino acid ABC transporter, substrate-binding protein [Bordetella avium 197N] Length = 338 Score = 421 bits (1084), Expect = e-116, Method: Composition-based stats. Identities = 148/321 (46%), Positives = 225/321 (70%), Gaps = 3/321 (0%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 + ++KK+GF++CG++TG+ GF+ + G+WKG DVD CRA+++A+F D SK + Sbjct: 21 QAGTTFDNVKKKGFVQCGVSTGIPGFSIADSKGEWKGLDVDLCRAVAAAMFGDASKFKVT 80 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 PLN ++RF ALQS ++D+L+RNT TL R+ +LGLA + Y+D QG ++ K G+ S Sbjct: 81 PLNTQQRFTALQSGEVDVLTRNTTLTLSRDTTLGLADVAVNYYDSQGVMVSKDLGVKSAK 140 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 +L GA++CVQ GTTTEL LAD+F+++N+++ P+V ++ +EI A+ A RCDA+T D S L Sbjct: 141 ELGGATVCVQPGTTTELNLADWFRSNNIEFKPVVIDKYDEIVRAFSAGRCDAFTTDKSQL 200 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 + + T ++P +VILP+ SK PL P + QGD +W+N++ WT AM+ AEE GIT KN+ Sbjct: 201 ASTRTTLEKPDNYVILPEDFSKEPLGPMVRQGDEQWFNMIRWTLTAMIEAEEYGITSKNV 260 Query: 262 NQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELK 321 +++K + NP++QR LG+ + +G+ LG+ W Y I++ +GNYGE F+ NLG S +K Sbjct: 261 EEMTK-SGNPNIQRILGV--TPGMGKNLGVDDKWAYNIVKQVGNYGESFEANLGKNSPMK 317 Query: 322 IPRGYNALWSKGGLMYAPPIR 342 + RG NA + GGLMY PIR Sbjct: 318 LERGMNASYKHGGLMYGWPIR 338 >gi|163848771|ref|YP_001636815.1| extracellular solute-binding protein [Chloroflexus aurantiacus J-10-fl] gi|163670060|gb|ABY36426.1| extracellular solute-binding protein family 3 [Chloroflexus aurantiacus J-10-fl] Length = 389 Score = 421 bits (1082), Expect = e-116, Method: Composition-based stats. Identities = 147/328 (44%), Positives = 219/328 (66%), Gaps = 4/328 (1%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTG-LVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 T+ + I RG L CG+N L GFA V + G ++GFD+DFCRA+++A+FDD Sbjct: 65 GTTNQPAAGGQIERILSRGTLICGVNNNPLPGFASVDSAGVYRGFDIDFCRAVAAALFDD 124 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 P+K+++ PL+A+ERF ALQS +ID+L RN+ WTL R+ +LGL + P T++DGQG ++ K Sbjct: 125 PTKVEFRPLSAQERFTALQSGEIDVLIRNSTWTLGRDGTLGLDWAPTTFYDGQGMMVRKD 184 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 GI ++ + GA+ICVQ G+TTEL LAD F+A + + P+VF + AAY A +CD + Sbjct: 185 SGIETLEDMDGATICVQTGSTTELNLADQFRARGLTFTPVVFPDGDATRAAYDAGQCDGF 244 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 T D S L + P++H IL +SK PL PA+ QGD +W++ V W +A AEE Sbjct: 245 TTDKSGLISSLTLLTNPADHKILDVTMSKEPLGPAVRQGDPQWFDAVRWIVFATFQAEEY 304 Query: 255 GITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNL 314 GIT +N++Q + P+++RFLGI+ +G +GL D+ R++RH+GNY E+++RNL Sbjct: 305 GITSQNLDQFLG-SDVPEIRRFLGIEGE--LGAGIGLPNDFAARVVRHVGNYAEIYNRNL 361 Query: 315 GNQSELKIPRGYNALWSKGGLMYAPPIR 342 G + +PRG NAL+++GGL+Y+PP R Sbjct: 362 GPDTPFNLPRGLNALYTEGGLLYSPPFR 389 >gi|254451978|ref|ZP_05065415.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Octadecabacter antarcticus 238] gi|198266384|gb|EDY90654.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Octadecabacter antarcticus 238] Length = 338 Score = 421 bits (1082), Expect = e-116, Method: Composition-based stats. Identities = 154/342 (45%), Positives = 213/342 (62%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + L I + + A L D+K RG L CG+ TGLVGFA ANG W+GFD Sbjct: 1 MKNSVLLG--ALTIAGLAAGAAAAGTLDDVKARGTLNCGVTTGLVGFAAPDANGVWEGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRAL++A+ DP ++++P + RF AL S +ID L+RNT WT R++ L F Sbjct: 59 VGLCRALAAAVLGDPMAVEFVPTTGQTRFTALASGEIDFLARNTTWTFSRDVDLKFEFVG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 I Y+DGQGF++ + G+SS L GA++C+Q GTTTEL LADYF+++N+ Y P+ E Sbjct: 119 INYYDGQGFMVPRALGVSSAKDLDGATVCIQTGTTTELNLADYFRSNNISYEPVPIETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT D S L A + T + P +HV+LP+IISK PL P + GD EW ++ Sbjct: 179 EGQQQYLAGACDTYTTDASGLAATRATFENPGDHVLLPEIISKEPLGPLVRHGDNEWADV 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 WT A++ AEELG+T NI +++ T NP++ R LG + +G LGL DW + I Sbjct: 239 ARWTLNALIAAEELGVTSANIAEMASGTDNPEINRLLGSEGE--LGAMLGLESDWAMKAI 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F++N+G + + + RG NALW+ GGL+Y PP R Sbjct: 297 MAGGNYGELFEKNIGENTPIGLARGLNALWTDGGLVYTPPFR 338 >gi|149908408|ref|ZP_01897071.1| general L-amino acid-binding protein [Moritella sp. PE36] gi|149808571|gb|EDM68506.1| general L-amino acid-binding protein [Moritella sp. PE36] Length = 337 Score = 421 bits (1082), Expect = e-115, Method: Composition-based stats. Identities = 165/334 (49%), Positives = 227/334 (67%), Gaps = 3/334 (0%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 L L + NA+ L + K+G L CG++TG+ GF+ + G WKG DVDFCR+++ Sbjct: 7 ALILGLASTLPNLVNAATLEQVMKKGVLNCGVSTGIPGFSATDSKGVWKGIDVDFCRSVA 66 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 +A+ D SK++Y+PL AKERF ALQS +ID+LSR + WT R+ SLGL F + Y+DGQG Sbjct: 67 AAVLGDASKVKYIPLTAKERFTALQSGEIDLLSRASTWTATRDTSLGLNFAGVNYYDGQG 126 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 F++ K+ G++S +L GAS C+QAGTTTEL L DYFK++NM+Y + F+ + A++ Sbjct: 127 FLVKKEIGVTSAKELDGASFCIQAGTTTELNLTDYFKSNNMEYKAVTFDTSGQTIDAFKK 186 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 RCDA T D S LY L++ D P ++LPDIISK PL P + QGD W+N+V W+ +A Sbjct: 187 GRCDAVTSDASQLYGLRIKLDDPKSAIVLPDIISKEPLGPVVRQGDDAWFNVVRWSLFAT 246 Query: 249 VTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGE 308 + AEELG+T N+++ K + NP V+R LG+ + GE LGL DW Y+I++ +GNY E Sbjct: 247 LEAEELGVTASNVDKQLK-SNNPSVKRLLGV--TGKAGENLGLKSDWAYQIVKQVGNYEE 303 Query: 309 MFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 MFD N+G S L I RG N LW+KGGLMYA PIR Sbjct: 304 MFDNNVGKNSPLNIDRGLNNLWNKGGLMYAMPIR 337 >gi|119897622|ref|YP_932835.1| putative amino acid-binding protein [Azoarcus sp. BH72] gi|119670035|emb|CAL93948.1| putative amino acid-binding protein [Azoarcus sp. BH72] Length = 344 Score = 420 bits (1081), Expect = e-115, Method: Composition-based stats. Identities = 161/347 (46%), Positives = 233/347 (67%), Gaps = 8/347 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K + + F + S A+ L IK++G L CG+++G+ GF+ + G+W Sbjct: 1 MKKSLRRIAPAVALGFAATLSATAAHAGATLDQIKRKGELACGVSSGVPGFSATDSRGNW 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G DVD CRAL++A+ D +K++++PL +++RF ALQ+ ++DILSRNT WTL R+ SLGL Sbjct: 61 SGLDVDVCRALAAAVLGDANKVKWVPLGSQQRFSALQAGEVDILSRNTTWTLTRDASLGL 120 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 AF ITY+DGQGF++ K ++S QL A ICVQ+GTTTE LADYF+ ++ P+VF Sbjct: 121 AFTAITYYDGQGFLVPKSIKVTSAKQLRDAEICVQSGTTTEKNLADYFRRQGIRVKPVVF 180 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKL-TNDRPSEHVILPDIISKSPLAPAIIQGDT 235 E+ + A+ RC AYT D S+L ++ +P +++ILP+ ISK PL P + +GD Sbjct: 181 EKFDASLKAFFNGRCVAYTTDASSLAGIRAGEAPKPDDYLILPETISKEPLGPIVRRGDD 240 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDW 295 EW+ IV W YA++ AEELG+T+ N ++ + +P V R LG K+ ++G+ LGL W Sbjct: 241 EWFTIVKWVVYALIEAEELGVTRDNADKQAAGG-DPAVGRLLG--KTEDLGKPLGLDAQW 297 Query: 296 TYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 YR +R +GNYGE+F+RNLG S L++PRG NALWS+GGLMYAPP+R Sbjct: 298 AYRAVRAVGNYGEVFERNLGAGSPLRLPRGQNALWSQGGLMYAPPLR 344 >gi|119946443|ref|YP_944123.1| ABC amino acid transporter extracellular solute-binding protein, family 3 [Psychromonas ingrahamii 37] gi|119865047|gb|ABM04524.1| ABC amino acid transporter extracellular solute-binding protein, family 3 [Psychromonas ingrahamii 37] Length = 337 Score = 420 bits (1081), Expect = e-115, Method: Composition-based stats. Identities = 163/321 (50%), Positives = 229/321 (71%), Gaps = 3/321 (0%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 +AS L ++ K+G + CGI+TG+ GF+ + G W+G DVDFC+++++A+F D SK++Y+ Sbjct: 20 ASASTLEEVVKKGDISCGISTGIAGFSSTDSKGVWEGLDVDFCKSVAAAVFGDASKVKYI 79 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 PL AKERF ALQS +ID+LSR T WT R+ SLGL F + Y+DGQGF+++KK G++S Sbjct: 80 PLTAKERFTALQSGEIDVLSRATTWTATRDTSLGLNFAGVNYYDGQGFLVNKKIGVTSAK 139 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 +LSGA+ C+QAGTT+EL L DYF+A+NM+Y + ++ + +++ RCD T D S L Sbjct: 140 ELSGATFCIQAGTTSELNLTDYFQANNMEYRAVTYDTSGQTINGFKSGRCDVITSDASQL 199 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 Y LKL D P ++LP+IISK PL P + QGD EW+NIV WT +A + AEELG++ N+ Sbjct: 200 YGLKLKLDDPDSAIVLPEIISKEPLGPVVRQGDDEWFNIVRWTMFATLEAEELGVSSANV 259 Query: 262 NQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELK 321 + + K + NP + R LG KS GE LGL DW Y+I++ +GNYGEMFD+N+G S L Sbjct: 260 DAMLK-SENPSIMRLLG--KSGTAGENLGLKGDWVYQIVKQVGNYGEMFDKNVGKDSPLN 316 Query: 322 IPRGYNALWSKGGLMYAPPIR 342 I RG N LW++GGLMY+ PIR Sbjct: 317 IDRGLNKLWNQGGLMYSMPIR 337 >gi|254486168|ref|ZP_05099373.1| glutamate/glutamine/aspartate/asparagine-binding protein [Roseobacter sp. GAI101] gi|214043037|gb|EEB83675.1| glutamate/glutamine/aspartate/asparagine-binding protein [Roseobacter sp. GAI101] Length = 338 Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats. Identities = 157/342 (45%), Positives = 224/342 (65%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + + L + ++ A+ L D+K+RG L CG+ TGLVGFA ANG+W+GFD Sbjct: 1 MNKSVFFGAMTVAGLV--AGASAAATLDDVKERGKLNCGVTTGLVGFAAPNANGEWEGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+F DP+ ++++P K RF AL S +ID L+RNT WT R++ L F Sbjct: 59 VAVCRAVAAAVFGDPTAVEFIPTTGKTRFTALASGEIDFLARNTTWTFSRDVDLKFDFIG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K G+SS L GA++C+Q GTTTEL LAD+F+A+N+ Y P+ E Sbjct: 119 VNYYDGQGFMVPKALGVSSAKDLDGATVCIQTGTTTELNLADFFRANNISYEPVPIETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT D S L + + T + P +H+ILP+IISK PL P + GD +W ++ Sbjct: 179 EGQQQYLAGACDTYTTDASGLASTRATFETPGDHIILPEIISKEPLGPLVRHGDNDWGDL 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 W YA++ AEELG+T N+ +++ TTNP+V R LG + + +GE LGL+ DW I Sbjct: 239 TRWVLYALIAAEELGVTSANVEEMATSTTNPEVARLLGAEGT--LGEMLGLSADWAKNAI 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F +N+G ++ + + RG NA W+ GGLMYAPP R Sbjct: 297 ASQGNYGEIFAKNIGEETPIGLARGLNAQWTDGGLMYAPPFR 338 >gi|89070522|ref|ZP_01157811.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Oceanicola granulosus HTCC2516] gi|89043829|gb|EAR50027.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Oceanicola granulosus HTCC2516] Length = 339 Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats. Identities = 155/343 (45%), Positives = 219/343 (63%), Gaps = 5/343 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ L + + ++ A+ L D+K RG L CG++TGL GF+ ANG W+GFD Sbjct: 1 MKKSVFLG--ALTVAGLAAGASAAATLDDVKARGTLNCGVSTGLTGFSAPDANGVWQGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V FCRAL++A+ DP+ ++++P + RF AL S +ID+L+RNT WT R+ L F Sbjct: 59 VAFCRALAAAVLGDPNAVEFVPTTGQTRFTALSSNEIDVLARNTTWTFSRDNDLKFEFAG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGFI+ ++ G++S +L GA++C+Q GTTTEL LAD+F+ ++M+Y P+ E Sbjct: 119 VNYYDGQGFIVPRELGVASAMELDGATVCIQTGTTTELNLADFFRVNDMEYEPVPIETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CDAYT D S L A + T + P +HVILP+IISK PL P + GD EW +I Sbjct: 179 EAQQQYLAGACDAYTTDASGLAATRATFENPEDHVILPEIISKEPLGPLVRHGDPEWGDI 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVS-KDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 V WT A++ AEE G+T NI Q++ + N +V R LG + +G +GL DW R Sbjct: 239 VRWTLQALIAAEEYGVTSANIEQMASEAGDNAEVNRLLGTEGE--LGAMIGLDSDWAQRA 296 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I GNYGE+F+ N+G S + + RG NA +S GGL+YA P R Sbjct: 297 IAAGGNYGEIFENNIGESSPVGLARGLNAQYSNGGLIYALPFR 339 >gi|298292513|ref|YP_003694452.1| extracellular solute-binding protein family 3 [Starkeya novella DSM 506] gi|296929024|gb|ADH89833.1| extracellular solute-binding protein family 3 [Starkeya novella DSM 506] Length = 337 Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats. Identities = 165/337 (48%), Positives = 226/337 (67%), Gaps = 3/337 (0%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 L + T+ +A L D+K RG LKCG++ GL GF+ G W GFDVD CR Sbjct: 4 IAFALAAAGIVMTAGLGHADTLADVKARGTLKCGVSQGLAGFSAKDDKGQWSGFDVDLCR 63 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 A++SAIFDD SK++Y+PL+A RF ALQ +ID+LSRN+ WT+ RE L L F ++Y+D Sbjct: 64 AVASAIFDDASKVEYVPLSADARFPALQKGEIDLLSRNSTWTMQREADLKLLFAAVSYYD 123 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 GQGF++ K + + +L + +C Q+GTT+ D+FK +NM I V+E+ A Sbjct: 124 GQGFLVPVAKKVDTALELDKSKVCTQSGTTSVGNAKDFFKQNNMALELIELPTVDEVVKA 183 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 Y +CD T D+S LYAL+L +P+++++LPD+ISK PL P + QGD W N V W+ Sbjct: 184 YDEGKCDVLTTDVSQLYALRLRLAKPADYIVLPDVISKEPLGPVVRQGDDAWLNAVKWSF 243 Query: 246 YAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGN 305 YA++ AEELGI+Q ++Q K + PDVQRF+G D S GE LGLTKDW RI++++GN Sbjct: 244 YALLNAEELGISQATLDQALK-SQKPDVQRFVGTDGS--YGEQLGLTKDWAVRIVKNVGN 300 Query: 306 YGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 YGE+F+RN+G QS+L IPRG N LWS GG+ YAPPIR Sbjct: 301 YGEVFERNIGAQSKLGIPRGINQLWSAGGIQYAPPIR 337 >gi|33591762|ref|NP_879406.1| amino acid-binding periplasmic protein [Bordetella pertussis Tohama I] gi|33599230|ref|NP_886790.1| amino acid-binding periplasmic protein [Bordetella bronchiseptica RB50] gi|33571405|emb|CAE44886.1| amino acid-binding periplasmic protein [Bordetella pertussis Tohama I] gi|33575276|emb|CAE30739.1| amino acid-binding periplasmic protein [Bordetella bronchiseptica RB50] Length = 338 Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats. Identities = 148/324 (45%), Positives = 219/324 (67%), Gaps = 4/324 (1%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 + L +KKRG + CG TG GF+ G W+G DVD CRA+++A+F D SKI+ Sbjct: 18 AGAQGATLDVVKKRGTVVCGTTTGFAGFSAPDKQGTWRGLDVDLCRAVAAAVFGDASKIK 77 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +PLN+++RF ALQS ++D+L+RNT T R+ +LG+ I ++DGQGF++ K G+ S Sbjct: 78 VVPLNSQQRFTALQSGEVDVLTRNTTVTQQRDTALGIIHAGINFYDGQGFMVPKSLGVKS 137 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 +L+GA+IC+Q GT+ E TLAD+ +A+ + Y P+V E E+ A+ + RCD ++ D S Sbjct: 138 AKELNGATICLQTGTSNENTLADWARANQVSYKPVVIETFNEVVNAFASGRCDVFSTDAS 197 Query: 200 ALYALKLT-NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 L +++++ ++P ++V+LP+IISK PL P + QGD W NIV W+ AM+ AEE G+T Sbjct: 198 GLASIRISRLEKPDDYVVLPEIISKEPLGPFVRQGDDAWLNIVRWSLSAMIEAEEYGVTT 257 Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318 N+++ K + NP+V+R LG+ + G LGL + W Y II+ +GNYGE F+RN+G S Sbjct: 258 ANVDEQLK-SENPNVRRILGV--TPGAGANLGLDEKWAYNIIKQVGNYGESFERNVGQGS 314 Query: 319 ELKIPRGYNALWSKGGLMYAPPIR 342 LKI RG NA W++GGLMYA PIR Sbjct: 315 PLKIQRGLNAQWTQGGLMYALPIR 338 >gi|300865204|ref|ZP_07110022.1| extracellular solute-binding protein [Oscillatoria sp. PCC 6506] gi|300336795|emb|CBN55172.1| extracellular solute-binding protein [Oscillatoria sp. PCC 6506] Length = 354 Score = 418 bits (1075), Expect = e-115, Method: Composition-based stats. Identities = 149/330 (45%), Positives = 213/330 (64%), Gaps = 2/330 (0%) Query: 13 IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72 + ++ S L I RG L CG++ L GF+ V G + G DV+ CRA+++A+F Sbjct: 27 VATTSSATPQVQSRLDKIISRGTLICGVSGQLPGFSFVDEKGKYSGLDVEICRAIAAALF 86 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 DDP K++Y LNAKERF ALQS +IDILSRNT WTL R+ S GL F P+ ++D Q ++ Sbjct: 87 DDPEKVEYRNLNAKERFTALQSGEIDILSRNTTWTLSRDGSTGLEFAPVVFYDSQSIMVK 146 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 K GI ++ +G SICVQ GT+TE L+D + +KY P+VFE V A Y+ RC Sbjct: 147 KDSGIQTLKDFAGKSICVQTGTSTEQNLSDQMRKLGIKYTPVVFEDVNATFATYQEGRCQ 206 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 T D S L + + P +H+IL +++SK PLAPA+ GD++W + V W YA + AE Sbjct: 207 GVTADRSQLVSKRTILPTPDQHIILNEVMSKEPLAPAVSSGDSKWADAVRWIVYATIEAE 266 Query: 253 ELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDR 312 +LG+ +NI+Q++ TT+P+V+R +G + ++G+ LGL D+ R I+ +GNYGE++DR Sbjct: 267 DLGVNSQNIDQLATTTTDPNVKRLIGTEG--DLGKGLGLPNDFALRTIKKVGNYGEIYDR 324 Query: 313 NLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 NLG S LK+ RG N LW GGL+Y+PP R Sbjct: 325 NLGPSSTLKLDRGQNRLWKDGGLLYSPPFR 354 >gi|293602040|ref|ZP_06684495.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] gi|292819570|gb|EFF78596.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] Length = 361 Score = 418 bits (1075), Expect = e-115, Method: Composition-based stats. Identities = 150/335 (44%), Positives = 226/335 (67%), Gaps = 4/335 (1%) Query: 9 ILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 + LF +S++ A +K +GF++CG++TG+ GF+ + G W G DVD CRAL Sbjct: 30 VAAGTALFLSSWAATAGVTFDSVKNKGFVQCGVSTGVAGFSVNDSKGGWIGLDVDLCRAL 89 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + +F DP+K + + ++A +RF ALQS ++D+L RNT +L R+ +LGL + Y+D Q Sbjct: 90 AITMFGDPAKSKIMAVSAVQRFTALQSGEVDVLPRNTTLSLTRDTTLGLIGVGVNYYDSQ 149 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 G +++K + S +L GA++CVQ GTTTEL LAD+F++ N+ + P+V ER++EI A+ Sbjct: 150 GIMVNKSLNVKSAKELDGATVCVQPGTTTELNLADWFRSQNIVFKPVVVERLDEIIRAFA 209 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 RCDA+TGD S L A + + P ++ ILP+ SK PL P + QGD +W+N+V WT +A Sbjct: 210 VGRCDAFTGDKSQLAAARSNLENPGQYDILPENFSKEPLGPMVRQGDEQWFNVVRWTMFA 269 Query: 248 MVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYG 307 M+ AEE G+T KN++++ K +TNP+VQR LG+ + +G+ LG+ W Y II+H+GNYG Sbjct: 270 MLEAEEYGVTSKNVDEMLK-STNPNVQRLLGV--TPGMGKNLGVDDKWAYNIIKHIGNYG 326 Query: 308 EMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 E F++NLG S LK+ RG NA + GGLMY P+R Sbjct: 327 ESFEKNLGPSSPLKLSRGLNASYRDGGLMYGWPVR 361 >gi|89053118|ref|YP_508569.1| lysine-arginine-ornithine-binding periplasmic protein [Jannaschia sp. CCS1] gi|88862667|gb|ABD53544.1| L-glutamine-binding protein / L-glutamate-binding protein / L-asparagine-binding protein / L-aspartate-binding protein [Jannaschia sp. CCS1] Length = 338 Score = 418 bits (1074), Expect = e-115, Method: Composition-based stats. Identities = 152/342 (44%), Positives = 222/342 (64%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ L + L ++ +A LG++++RG L CG++TGL GF+ ANG+W+GFD Sbjct: 1 MKKSVFLGTLAVAGL--SAGFVSAQTLGEVQERGTLNCGVSTGLTGFSAPDANGEWQGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ D ++++P + RF AL S +ID+L+RNT WT R++ L F Sbjct: 59 VSVCRAVAAAVLGDAGAVEFVPTTGQTRFTALSSGEIDMLARNTTWTFSRDVDLAFEFVG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ ++ G+SS +L GA++C+Q GTTTEL LADYF ++NM Y P+ E Sbjct: 119 VNYYDGQGFMVPRELGVSSALELDGATVCIQTGTTTELNLADYFSSNNMSYEPVPIETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT D S L A + T + PS HV+LP+I+SK PL P + GD E+ ++ Sbjct: 179 EAQQQYLAGACDVYTTDASGLAATRATFEDPSAHVVLPEIVSKEPLGPLVRHGDNEFGDV 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT A++ AEELG+T N+ ++ T NP+++R LG + N+GE LGL W I Sbjct: 239 VRWTLNALIAAEELGVTSANVGEIGGTTENPEIRRLLGTEG--NLGEMLGLDAGWAAAAI 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+FDR++G + + + RG NA W+ GGL+YAPP R Sbjct: 297 GAGGNYGEIFDRHIGESTPIGLARGLNAQWTDGGLLYAPPFR 338 >gi|158338716|ref|YP_001519893.1| lysine-arginine-ornithine-binding periplasmic protein, putative [Acaryochloris marina MBIC11017] gi|158308957|gb|ABW30574.1| lysine-arginine-ornithine-binding periplasmic protein, putative [Acaryochloris marina MBIC11017] Length = 343 Score = 417 bits (1073), Expect = e-115, Method: Composition-based stats. Identities = 148/346 (42%), Positives = 218/346 (63%), Gaps = 7/346 (2%) Query: 1 MYKDF---FVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M + F ++L + L S S L + + ++CGI+ L GF+ V G++ Sbjct: 1 MIRKFSSLCAALLVALTLGSCSSSEAAGGRLQQVLAQKKVRCGISGELPGFSFVDEKGNY 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G DVD CRA+++A+FDDP ++Y PLNAKERF A+Q+ ++D+LSRNT WTL R+ S+ + Sbjct: 61 SGLDVDICRAIAAALFDDPDAVEYRPLNAKERFAAVQTGEVDVLSRNTTWTLDRDSSVRM 120 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 AF P+ ++DGQG ++ GI ++ ++C Q GTT E L D + + Y +V+ Sbjct: 121 AFAPVVFYDGQGVMVKADSGIKTLKDFKNRTVCTQTGTTNEKNLKDQMRKRKVDYKLVVY 180 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E + AAY RCD T D S L + + +P H IL +++SK PLAPA+ GD E Sbjct: 181 EDINSAYAAYAEGRCDGVTSDRSQLISRRTALPKPESHTILDEVLSKEPLAPAVADGDVE 240 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWT 296 W ++V W A V AEELGI Q N+ +K + +P V+RFLG ++ +G++LGL+ D+ Sbjct: 241 WADVVRWVVNATVEAEELGIQQDNLASFAK-SEDPVVKRFLGTEEE--LGKSLGLSPDFA 297 Query: 297 YRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 RI++H+GNYGE++DRNLG ++L +PRG N LWSKGGLMY+PP R Sbjct: 298 ARIVKHVGNYGEIYDRNLGPNTKLNLPRGQNQLWSKGGLMYSPPFR 343 >gi|254463676|ref|ZP_05077087.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Rhodobacterales bacterium Y4I] gi|206684584|gb|EDZ45066.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Rhodobacterales bacterium Y4I] Length = 338 Score = 417 bits (1073), Expect = e-114, Method: Composition-based stats. Identities = 159/342 (46%), Positives = 223/342 (65%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ L + + + A L D+K RG L CG+ TGLVGFA ANG+W+GFD Sbjct: 1 MKKTVFLG--ALTVAGLAAGAAAAGTLDDVKARGKLNCGVTTGLVGFAAPNANGEWEGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ D + ++++P K RF AL S +ID+L+RNT WT R++ L F Sbjct: 59 VAVCRAVAAAVLGDSTAVEFVPTTGKTRFTALASGEIDMLARNTTWTFSRDVDLKFEFVG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K+ G+SS +L GA++C+Q GTTTEL LAD+F+++N+ Y P+ E Sbjct: 119 VNYYDGQGFMVPKELGVSSAKELDGATVCIQTGTTTELNLADFFRSNNISYEPVPIETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT D S L A + T D PS HVILP+IISK PL P + GD EW ++ Sbjct: 179 EAQQQYLAGSCDVYTTDASGLAATRATFDDPSGHVILPEIISKEPLGPLVRHGDHEWGDV 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V W+ A++ AEELGIT NIN+++ T NP++ R LG + N+GE LGL DW + + Sbjct: 239 VRWSLMALIAAEELGITSANINEMAAGTENPEINRLLGSEG--NLGEMLGLNADWAMKAV 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F +N+G + + + RG NA W++GGL+YAPP R Sbjct: 297 AAGGNYGEIFAKNIGEDTPVGLARGLNAQWTEGGLLYAPPFR 338 >gi|296533466|ref|ZP_06896047.1| cationic amino acid ABC superfamily ATP binding cassette transporter, periplasmic binding protein [Roseomonas cervicalis ATCC 49957] gi|296266210|gb|EFH12254.1| cationic amino acid ABC superfamily ATP binding cassette transporter, periplasmic binding protein [Roseomonas cervicalis ATCC 49957] Length = 350 Score = 417 bits (1072), Expect = e-114, Method: Composition-based stats. Identities = 162/319 (50%), Positives = 221/319 (69%), Gaps = 5/319 (1%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 ++ L IK RG L CG+NTGL GFA+ + G W GFDV++CRAL+ A+F+D SK++Y+P Sbjct: 37 SATLDAIKARGTLSCGVNTGLAGFAQPDSQGRWTGFDVEYCRALAVALFNDASKVRYVPT 96 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 A+ RF ALQS +ID+L RNT TL R+ SLGL F I ++DGQGF++ G+ S +L Sbjct: 97 TAQNRFTALQSGEIDVLPRNTTATLSRDTSLGLDFPAINFYDGQGFMVKASLGVKSAKEL 156 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 GA++CVQ GTTTE L D+F+A+N+++ P++ ER+EE+ +AY A RCDAYT D+S L A Sbjct: 157 DGATVCVQPGTTTEQNLTDWFRANNIRFTPVIIERLEELVSAYVAGRCDAYTTDVSGLAA 216 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 + P EHVILP++ISK PL PA+ GD W ++V WTHYA++ AEE GIT N+++ Sbjct: 217 TRSAQPNPGEHVILPEVISKEPLGPAVRHGDQRWADLVRWTHYALLAAEEFGITAANVDK 276 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 + P+VQR LG K+ +G+ LG+ W RII+ GNYGEMF R+L + L I Sbjct: 277 AVAEDQRPEVQRLLG--KTGGLGQMLGVDNAWAARIIKATGNYGEMFTRHL---TPLGIQ 331 Query: 324 RGYNALWSKGGLMYAPPIR 342 RG NA W++GGL YA P R Sbjct: 332 RGPNAQWTQGGLQYAQPFR 350 >gi|187476710|ref|YP_784733.1| amino acid-binding periplasmic protein [Bordetella avium 197N] gi|115421296|emb|CAJ47801.1| amino acid-binding periplasmic protein [Bordetella avium 197N] Length = 338 Score = 417 bits (1072), Expect = e-114, Method: Composition-based stats. Identities = 153/339 (45%), Positives = 224/339 (66%), Gaps = 5/339 (1%) Query: 6 FVSILCLIILFFTSF-STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 S++ L L T S A L +K R + CG TG GF+ A G W+G DVD C Sbjct: 3 IASLVALAALSLTGLQSAQAGTLDVVKNRDAVVCGTTTGFAGFSAPDAQGVWRGLDVDLC 62 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 RA+++A+ D +KI+ +PLN+++RF ALQS ++D+L+RNT T R+ +LG+ I ++ Sbjct: 63 RAVAAAVLGDANKIKIVPLNSQQRFTALQSGEVDVLTRNTSVTQQRDTALGIIHAGINFY 122 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 DGQGF++ KK G+ S +L+GA+IC+Q GT+ E TLAD+ +A+N++Y P+V E E+ Sbjct: 123 DGQGFLVPKKLGVKSAKELNGATICLQQGTSNENTLADWARANNVQYTPVVIETFNEVVN 182 Query: 185 AYRAHRCDAYTGDISALYALKL-TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 A+ A RCD ++ D S L ++++ ++P ++++LP++ISK PL P + QGD W NIV W Sbjct: 183 AFAAGRCDVFSTDASGLASIRISKLEKPDDYIVLPEVISKEPLGPFVRQGDDNWLNIVYW 242 Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHM 303 T AM+ AEE G+T N+++ K + NP+V+R LG+ G +GL W Y I++ + Sbjct: 243 TLTAMIEAEEYGLTSANVDEQLK-SENPNVRRILGV--VPGAGPNMGLNDKWAYNIVKQV 299 Query: 304 GNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE FDRN+G S LKI RG NA W+KGGLMYA PIR Sbjct: 300 GNYGESFDRNVGKGSPLKIDRGLNAQWTKGGLMYALPIR 338 >gi|311109014|ref|YP_003981867.1| general L-amino acid-binding periplasmic protein AapJ 3 [Achromobacter xylosoxidans A8] gi|310763703|gb|ADP19152.1| general L-amino acid-binding periplasmic protein AapJ 3 [Achromobacter xylosoxidans A8] Length = 338 Score = 417 bits (1072), Expect = e-114, Method: Composition-based stats. Identities = 149/341 (43%), Positives = 226/341 (66%), Gaps = 3/341 (0%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K ++ +L + + + +K +GF++CG++TG+ GF+ + G W G DV Sbjct: 1 MKALKLAAAGTALLISSLTAHAGATFEAVKSKGFVQCGVSTGVAGFSVNDSKGGWIGLDV 60 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D CRAL+ +F D SK + + ++A +RF ALQS ++D+L RNT +L R+ +LGL + Sbjct: 61 DLCRALAITMFGDASKAKIMAVSALQRFTALQSGEVDVLPRNTTLSLTRDTTLGLIGVAV 120 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y+D QG +++K + S +L GA++CVQ GTTTEL LAD+F++ N+ + P+V ER++E Sbjct: 121 NYYDSQGIMVNKSLNVKSAKELDGATVCVQPGTTTELNLADWFRSQNIVFKPVVVERLDE 180 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 I A+ RCDA+TGD S L A + + P ++ ILP+ SK PL P + QGD +W+N+V Sbjct: 181 IIRAFAVGRCDAFTGDKSQLAAARSNLENPEKYDILPENFSKEPLGPMVRQGDEQWFNVV 240 Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301 WT +AM+ AEE GIT KN++++ K +TNP+VQR LG+ + +G+ LG+ W Y II+ Sbjct: 241 RWTLFAMLEAEEYGITSKNVDEMLK-STNPNVQRLLGV--TPGMGKNLGVDDKWAYNIIK 297 Query: 302 HMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++GNYGE F++NLG S LK+PRG NA + GGLMY P+R Sbjct: 298 NIGNYGESFEKNLGPSSPLKLPRGLNASYRDGGLMYGWPVR 338 >gi|309791172|ref|ZP_07685704.1| extracellular solute-binding protein family 3 [Oscillochloris trichoides DG6] gi|308226734|gb|EFO80430.1| extracellular solute-binding protein family 3 [Oscillochloris trichoides DG6] Length = 380 Score = 416 bits (1071), Expect = e-114, Method: Composition-based stats. Identities = 147/319 (46%), Positives = 220/319 (68%), Gaps = 3/319 (0%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + I RG L CG+N+ L GF V + G++ GFDV+FCRA+++A+FDDP+K+++ PL Sbjct: 65 GGRIQTIISRGNLICGVNSVLPGFGNVDSTGNFSGFDVEFCRAIAAALFDDPTKVEFRPL 124 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 NA+ERF ALQS ++D+LSRNT TL R+ S+GL F P+T++DGQG ++ K GI S+ + Sbjct: 125 NAQERFTALQSGEVDVLSRNTTATLTRDGSVGLDFAPVTFYDGQGMMVRKDSGIESLEDM 184 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 GA ICVQ+GTTTEL LAD F++ N+ + ++F+ + AY + +CD +T D S L + Sbjct: 185 EGARICVQSGTTTELNLADQFRSRNINFEAVIFQEADPTFQAYDSGQCDGFTTDKSGLVS 244 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 + P +H+IL +SK PLAPA++QGD +W + V W YA + AEELGIT NI Sbjct: 245 YQTKATNPDDHMILDVTMSKEPLAPAVLQGDAQWADAVRWVVYATIEAEELGITSANIGD 304 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 + T +P+++RFLG++ +G +GL D+ R+I+H+GNY E+++RNLG + +P Sbjct: 305 FAA-TEDPNIRRFLGVEGE--LGAGIGLPNDFAARVIKHVGNYQEIYNRNLGPDTPFNLP 361 Query: 324 RGYNALWSKGGLMYAPPIR 342 RG N L+++GGL+Y+PP R Sbjct: 362 RGLNTLYTEGGLLYSPPFR 380 >gi|33594953|ref|NP_882596.1| amino acid-binding periplasmic protein [Bordetella parapertussis 12822] gi|33565029|emb|CAE39978.1| amino acid-binding periplasmic protein [Bordetella parapertussis] Length = 338 Score = 416 bits (1070), Expect = e-114, Method: Composition-based stats. Identities = 148/324 (45%), Positives = 218/324 (67%), Gaps = 4/324 (1%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 + L +KKRG + CG TG GF+ G W+G DVD CRA+++A+F D SKI+ Sbjct: 18 AGAQGATLDVVKKRGTVVCGTTTGFAGFSAPDKQGTWRGLDVDLCRAVAAAVFGDASKIK 77 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +PLN+++RF ALQS ++D+L+RNT T R+ +LG+ I ++DGQGF++ K G+ S Sbjct: 78 VVPLNSQQRFTALQSGEVDVLTRNTTVTQQRDTALGIIHAGINFYDGQGFMVPKSLGVKS 137 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 +L+GA+IC+Q GT+ E TLAD+ +A+ + Y P+V E E+ A+ + RCD ++ D S Sbjct: 138 AKELNGATICLQTGTSNENTLADWARANQVSYKPVVIETFNEVVNAFASGRCDVFSTDAS 197 Query: 200 ALYALKLT-NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 L +++++ ++P ++V+LP+IISK PL P + QGD W NIV W+ AM+ AEE G+T Sbjct: 198 GLASIRISRLEKPDDYVVLPEIISKEPLGPFVRQGDDAWLNIVRWSLSAMIEAEEYGVTT 257 Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318 N+++ K + NP+V+R LG+ + G LGL + W Y II+ +GNYGE F+RN+G S Sbjct: 258 ANVDEQLK-SENPNVRRILGV--TPGAGANLGLDEKWAYNIIKQVGNYGESFERNVGQGS 314 Query: 319 ELKIPRGYNALWSKGGLMYAPPIR 342 LKI RG NA W +GGLMYA PIR Sbjct: 315 PLKIQRGLNAQWIQGGLMYALPIR 338 >gi|150397777|ref|YP_001328244.1| extracellular solute-binding protein [Sinorhizobium medicae WSM419] gi|150029292|gb|ABR61409.1| extracellular solute-binding protein family 3 [Sinorhizobium medicae WSM419] Length = 336 Score = 416 bits (1070), Expect = e-114, Method: Composition-based stats. Identities = 156/324 (48%), Positives = 228/324 (70%), Gaps = 3/324 (0%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 +T A+ L +K+RG L+CG++ G++GF+ G+W GFD+DFCRA+++A D ++ Sbjct: 16 GTATQAATLDVVKQRGELRCGVSQGVLGFSAPDDKGEWSGFDIDFCRAVAAAALGDADQV 75 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 +Y+PL+ KERF ALQS ++D+LSR T WTL R+ LG++F +TY+DGQ F++ G+ Sbjct: 76 KYVPLSTKERFTALQSGEVDLLSRQTTWTLSRDTDLGMSFVGVTYYDGQAFMVRDDIGVK 135 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 SV +LSGAS+C + GTTTE +ADYF A+ ++Y I FE+ ++ A+ A RCD Y+ D Sbjct: 136 SVKELSGASVCTETGTTTEQNMADYFSANKIEYKVIAFEKADQTIQAFNAGRCDVYSTDA 195 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 SALY+ ++T + P V+LP++ISK PL PA+ QGD +W+ +V WT +AMV AEELGIT Sbjct: 196 SALYSQRMTLNDPDRFVVLPEVISKEPLGPAVRQGDDQWFKVVRWTLFAMVEAEELGITL 255 Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318 ++ + + T +RFLG+D + G ALGL DW Y+++ +GNYGE+F+R+LG S Sbjct: 256 ESAASLLESGTVAQ-KRFLGVD--NEAGRALGLNPDWAYQVVSAVGNYGEIFERHLGQAS 312 Query: 319 ELKIPRGYNALWSKGGLMYAPPIR 342 LKI RG N LW+ GGL+YAPP+R Sbjct: 313 ALKIDRGLNKLWNAGGLIYAPPVR 336 >gi|219847287|ref|YP_002461720.1| extracellular solute-binding protein family 3 protein [Chloroflexus aggregans DSM 9485] gi|219541546|gb|ACL23284.1| extracellular solute-binding protein family 3 [Chloroflexus aggregans DSM 9485] Length = 389 Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats. Identities = 149/328 (45%), Positives = 220/328 (67%), Gaps = 4/328 (1%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTG-LVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 T+ + ++ I RG L CG+N L GFA V A+G + GFD+DFCRA+++A+FDD Sbjct: 65 GTTNQPASGGLIQQILARGRLICGVNNNPLPGFASVDASGVYSGFDIDFCRAVAAALFDD 124 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 P+K+ + PL+A+ERF ALQ+ +ID+L RN+ WTL R+ +LGL + P T++DGQG ++ K Sbjct: 125 PTKVDFRPLSAQERFTALQTGEIDVLIRNSTWTLGRDGNLGLDWAPTTFYDGQGMMVRKD 184 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 GI+++ + GA+ICVQ GTTTEL LAD F+A + + P+VF + AAY A +CD + Sbjct: 185 SGINTLEDMDGATICVQTGTTTELNLADQFRARGLTFTPVVFPDGDSTRAAYDAGQCDGF 244 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 T D S L + P++H IL +SK PL PA+ QGD +W++ V W +A AEE Sbjct: 245 TTDKSGLISSLTLLSNPADHKILEVTMSKEPLGPAVKQGDPQWFDAVRWIVFATFQAEEY 304 Query: 255 GITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNL 314 GIT +N+N ++ P+++RFLGI+ ++ +GL D+ RIIRH+GNY E+++RNL Sbjct: 305 GITSQNVNDFL-NSDVPEIRRFLGIEG--DLAAGIGLPNDFAVRIIRHVGNYAEIYNRNL 361 Query: 315 GNQSELKIPRGYNALWSKGGLMYAPPIR 342 G + +PRG NAL++ GGL+Y+PP R Sbjct: 362 GPDTPFNLPRGLNALYTDGGLLYSPPFR 389 >gi|311108222|ref|YP_003981075.1| general L-amino acid-binding periplasmic protein AapJ 1 [Achromobacter xylosoxidans A8] gi|310762911|gb|ADP18360.1| general L-amino acid-binding periplasmic protein AapJ 1 [Achromobacter xylosoxidans A8] Length = 340 Score = 415 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 147/343 (42%), Positives = 229/343 (66%), Gaps = 4/343 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + L + + + L +KK+GF++CG+ G+ GF+ + G+W+G D Sbjct: 1 MKRSILFAASALALACASQAAVAGPTLDAVKKKGFVQCGLTDGVSGFSATNSKGEWEGMD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD CRA+++A+F DP+K + PL+ ++RF ALQS ++D+L R T R+ SLGLA Sbjct: 61 VDICRAVAAAVFGDPTKFKGTPLSTQQRFTALQSGEVDVLLRTVTLTQTRDTSLGLAAVA 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +++DGQG +++KK G+ S +L+GA++CVQ GTTTEL LAD+F+ +N+++ P+V ++V Sbjct: 121 ASFYDGQGILVNKKLGVKSAKELNGATVCVQPGTTTELNLADWFRTNNIEFKPVVIDKVT 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E+ A+ + RCDA+T D S L A++ T +P ++ ILP+ SK PL P + QGD W Sbjct: 181 EVVRAFESGRCDAFTDDSSQLAAVRATQVAKPDDYEILPERFSKEPLGPMVRQGDENWLG 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +A++ AEE GITQKN++++ K + NP++ R LG+ + G+ +GL + W Y Sbjct: 241 IVRWTLFALMEAEEYGITQKNVDEMLK-SNNPNIARILGV--TPGAGKNMGLDEKWAYNA 297 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+F+RN+G S+L + RG NALW+KGG MY PIR Sbjct: 298 IKAVGNYSEVFERNVGKDSKLGLQRGTNALWNKGGAMYPWPIR 340 >gi|317403931|gb|EFV84400.1| L-amino acid ABC transporter [Achromobacter xylosoxidans C54] Length = 338 Score = 415 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 146/326 (44%), Positives = 218/326 (66%), Gaps = 3/326 (0%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 T + L +KKRG+++CG++TG+ GF+ + G+W+G DVD CRA+++ IF+D S Sbjct: 16 VTGLAHAGPTLDTVKKRGYVQCGVSTGIQGFSSPDSKGNWQGLDVDMCRAIAATIFNDAS 75 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 K + PL + RF ALQS ++D+L+RN T+ R+ +LGL + Y+D QG ++ + G Sbjct: 76 KFRLTPLTTQARFTALQSGEVDVLTRNVTPTMARDTTLGLISTGVNYYDSQGVMVSARLG 135 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 + + +L GA+ICVQ GT TEL LAD+F+A+ +K+ P+V ++ +EI A+ A RCDA+T Sbjct: 136 VRKLKELDGATICVQPGTVTELDLADWFRANGLKFKPVVIDKYDEIVRAFSAGRCDAFTS 195 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 D S L A + T + P +VIL + I+KSPL P + QGD W+N+V WT AM+ AEE G+ Sbjct: 196 DKSQLAASRTTLEHPDNYVILDENIAKSPLGPMVRQGDDNWFNVVRWTLNAMLEAEEFGV 255 Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316 T N++ K +TNP+VQR LG+ + +G+ LG+ W Y I++ +GNYGE ++RNLG Sbjct: 256 TSANVDSQLK-STNPNVQRILGV--TPGMGKNLGVDDKWAYNIVKQVGNYGESYERNLGM 312 Query: 317 QSELKIPRGYNALWSKGGLMYAPPIR 342 S +K+PRG NA W GG MY P+R Sbjct: 313 ASAMKLPRGLNAQWRDGGQMYGWPVR 338 >gi|113475659|ref|YP_721720.1| extracellular solute-binding protein [Trichodesmium erythraeum IMS101] gi|110166707|gb|ABG51247.1| extracellular solute-binding protein, family 3 [Trichodesmium erythraeum IMS101] Length = 343 Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats. Identities = 145/318 (45%), Positives = 219/318 (68%), Gaps = 2/318 (0%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L +K RG L CG+ G+ GF+ V NG++ G DVD C+A+++A+F+DP+ ++Y L+ Sbjct: 28 SRLDIVKNRGKLICGVEGGIPGFSFVDKNGNYSGIDVDICKAVAAALFNDPNLVEYRNLD 87 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 + ERF AL ++D+LSRNT WT+ R+ ++GL F P T++DGQG ++ G+ S+ L Sbjct: 88 STERFTALNGGEVDMLSRNTTWTVSRDTTVGLEFAPTTFYDGQGMMVRANSGVESLEDLQ 147 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G SICV+AGTTTEL L D + N+ + F++ + AAY RCD T D S L + Sbjct: 148 GKSICVEAGTTTELNLTDNLRQRNVTAETLTFQQADPAYAAYAEGRCDGMTSDKSQLLSR 207 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 + T P++HVIL +SK PL P D+ W+++V W YA++ AEELGITQ+N++ + Sbjct: 208 RSTLPSPNDHVILQVTMSKEPLGPVTKNNDSAWFDVVKWVTYALIEAEELGITQENVDDL 267 Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324 +++ NP ++RFLG+D ++GE LGL+ D+ YR+I+++GNY E++DRNLG +S+ K+PR Sbjct: 268 KQNSDNPTIRRFLGVDG--DLGEGLGLSNDFAYRVIKNVGNYAEVYDRNLGEESQFKLPR 325 Query: 325 GYNALWSKGGLMYAPPIR 342 G N LW+KGGL+Y+PP R Sbjct: 326 GMNNLWTKGGLLYSPPFR 343 >gi|153011796|ref|YP_001373009.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC 49188] gi|151563684|gb|ABS17180.1| extracellular solute-binding protein family 3 [Ochrobactrum anthropi ATCC 49188] Length = 335 Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats. Identities = 154/318 (48%), Positives = 224/318 (70%), Gaps = 3/318 (0%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 + IK+RG ++CG++ G++GF+ NG W GFDVDFCRA+++A +P K+ Y+PL+ Sbjct: 21 GTVDVIKERGEVRCGVSQGVLGFSVPDKNGVWGGFDVDFCRAVAAATLGNPDKVAYVPLS 80 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 K+RF ALQS ++D+LSR T WTL R+ LG++F + Y+DGQ F+++K+ G+ SV ++S Sbjct: 81 TKDRFTALQSGEVDLLSRQTTWTLSRDTDLGMSFVGVNYYDGQAFMVNKEVGVKSVKEIS 140 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 GAS+C + GTTTE +ADYF A+ ++Y I FE+ ++ A+ RCD Y+ D SALYA Sbjct: 141 GASVCTETGTTTEQNMADYFSANKIEYQVIAFEKPDQTIQAFNTGRCDVYSTDASALYAQ 200 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 +LT + P V+LP++ISK PL PA+ QGD +W+ IV WT +A++ AEE+GIT++N + Sbjct: 201 RLTLNDPDRFVVLPEVISKEPLGPAVRQGDDQWFKIVRWTLFALIEAEEMGITKENAASL 260 Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324 + T +RFLG++ + G+A+GL W Y+ I +GNYGE+F+R+LG S LKI R Sbjct: 261 LESGTVAQ-KRFLGVESEA--GKAMGLDAKWAYQAISAVGNYGEIFERHLGKDSPLKIDR 317 Query: 325 GYNALWSKGGLMYAPPIR 342 G N LWS GGLMYAPP R Sbjct: 318 GLNRLWSDGGLMYAPPAR 335 >gi|119489532|ref|ZP_01622293.1| polar amino acid transport system substrate-binding proetin [Lyngbya sp. PCC 8106] gi|119454611|gb|EAW35758.1| polar amino acid transport system substrate-binding proetin [Lyngbya sp. PCC 8106] Length = 357 Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats. Identities = 136/325 (41%), Positives = 214/325 (65%), Gaps = 3/325 (0%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 T+ S L +K RG L CG++ G+ GF+ V NG++ G DVD C+A+++AIF+DP+ Sbjct: 36 GGSGTSQSRLDTVKSRGKLVCGVDGGIPGFSFVNENGEYSGLDVDMCKAVAAAIFNDPNA 95 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++Y L++ ERF AL+S ++D+LSRNT WT+ R+ S+G+ F P T++DGQG ++ + GI Sbjct: 96 VEYRNLDSTERFEALKSGEVDMLSRNTTWTITRDTSVGMEFAPTTFYDGQGMMVRRDSGI 155 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 +S+ G ++CV+AGTTTEL L D + + +++ + AAY CD T D Sbjct: 156 TSLEDFEGRTVCVEAGTTTELNLTDNMRKAGVNSETKTYQQADPAYAAYAEGACDGMTSD 215 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 S L A + T P +H++L +SK PL P I D+ W+++V WT +A++ EELGI Sbjct: 216 KSQLVARRSTLPNPDDHILLDVTMSKEPLGPVTINNDSAWFDVVKWTTFALIEGEELGIN 275 Query: 258 QKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQ 317 Q N++Q+ K + P ++RFLGI+ ++G+ LGL ++ +I+ +GNYGE+++RNLG Sbjct: 276 QANVDQL-KSSEEPTIRRFLGIEG--DLGQGLGLDNEFAANVIKQVGNYGEIYERNLGQG 332 Query: 318 SELKIPRGYNALWSKGGLMYAPPIR 342 S+ ++ RG NALW+ GGL+Y+PP R Sbjct: 333 SQFRLDRGQNALWNNGGLLYSPPFR 357 >gi|254462559|ref|ZP_05075975.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Rhodobacterales bacterium HTCC2083] gi|206679148|gb|EDZ43635.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Rhodobacteraceae bacterium HTCC2083] Length = 347 Score = 415 bits (1066), Expect = e-114, Method: Composition-based stats. Identities = 150/343 (43%), Positives = 213/343 (62%), Gaps = 5/343 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + + + + A L D+K RG L CG+ TGLVGFA ANG+W+GFD Sbjct: 9 MKKSVFFG--AMTVAALAAGAAAAGTLDDVKARGKLNCGVTTGLVGFAAPDANGEWQGFD 66 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A DPS ++++P K RF AL S +ID+L+RNT WT R++ L F Sbjct: 67 VGVCRAVAAAALGDPSAVEFVPTTGKTRFTALASGEIDMLARNTTWTFSRDVDLKFEFVG 126 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K G+SS +L GA++C+Q GTTTEL LADYF+ +N+ Y P+ E Sbjct: 127 VNYYDGQGFMVPKALGVSSAKELDGATVCIQTGTTTELNLADYFRTNNISYEPVPIETNA 186 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y CD YT D S L A + + P +HV+LP+IISK PL P + GD+EW ++ Sbjct: 187 EAQPLYLEGACDVYTTDASGLAATRAAFENPGDHVVLPEIISKEPLGPLVRHGDSEWGDV 246 Query: 241 VSWTHYAMVTAEELGITQ-KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 V W+ A++ AEELG+T + + NP++ R LG + + +GE LGL DW + Sbjct: 247 VRWSLNALIAAEELGVTSANIADMAAAAGDNPEINRLLGTEGT--LGEMLGLDADWAKKA 304 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I GNYGE+F++N+G + + + RG NA W+ GGL+Y PP R Sbjct: 305 IMAGGNYGEIFEKNIGENTPIGLGRGLNAQWTDGGLLYVPPFR 347 >gi|110678761|ref|YP_681768.1| glutamate/glutamine/aspartate/asparagine-binding protein [Roseobacter denitrificans OCh 114] gi|109454877|gb|ABG31082.1| glutamate/glutamine/aspartate/asparagine-binding protein [Roseobacter denitrificans OCh 114] Length = 338 Score = 415 bits (1066), Expect = e-114, Method: Composition-based stats. Identities = 155/342 (45%), Positives = 222/342 (64%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L I + + A L D+K RG L CG+ TGLVGFA A+G+W GFD Sbjct: 1 MKKSVLLG--ALTIAGLAAGAAAAGTLDDVKARGTLNCGVTTGLVGFAAPNADGEWNGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ D + ++++P K RF AL S +ID+L+RNT WT R++ L F Sbjct: 59 VAVCRAVAAAVLGDATAVEFVPTTGKTRFTALASGEIDMLARNTTWTFSRDVDLKFTFVG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 I Y+DGQGF++ K G++S +L GA++C+Q GTTTEL LAD+F+A+N+ Y P+ E Sbjct: 119 INYYDGQGFMVPKSLGVTSAKELDGATVCIQTGTTTELNLADFFRANNISYEPVPIETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT D S L A + + + PS+HV+LP+IISK PL P + GD EW ++ Sbjct: 179 EGQQQYLAGACDTYTTDASGLAATRASFENPSDHVLLPEIISKEPLGPLVRHGDDEWGDV 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT A++TAEELG+T N+++++ + NP+V+R LG + + +GE LGL DW R I Sbjct: 239 VRWTLNALITAEELGVTSANVSEMATGSNNPEVKRLLGTEGT--LGEMLGLDADWAMRAI 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F +N+G + + + RG NA W+ GGL+Y+PP R Sbjct: 297 ASQGNYGEIFAKNIGEDTPIALSRGLNAQWTNGGLIYSPPFR 338 >gi|260432480|ref|ZP_05786451.1| glutamate/glutamine/aspartate/asparagine-binding protein bztAprecursor [Silicibacter lacuscaerulensis ITI-1157] gi|260416308|gb|EEX09567.1| glutamate/glutamine/aspartate/asparagine-binding protein bztAprecursor [Silicibacter lacuscaerulensis ITI-1157] Length = 356 Score = 415 bits (1066), Expect = e-114, Method: Composition-based stats. Identities = 153/342 (44%), Positives = 221/342 (64%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + I + + A + D+K RG L CG+ TGLVGFA ANG+W+GFD Sbjct: 19 MKKSVILG--AATIAGLAAGAAAAGTVDDVKARGKLNCGVTTGLVGFAAPDANGEWQGFD 76 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ D + ++++P K RF AL S ++D+L+RNT WT R++ L F Sbjct: 77 VAVCRAVAAAVLGDANAVEFVPTTGKTRFTALASGEVDMLARNTTWTFSRDVDLKFDFVG 136 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K G+SS +L GA++C+Q GTTTEL LAD+F+++N+ Y P+ E Sbjct: 137 VNYYDGQGFMVPKALGVSSAKELDGATVCIQTGTTTELNLADFFRSNNISYEPVPIETNA 196 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT D S L A + T + P +HV+LP+IISK PL P + GD EW ++ Sbjct: 197 EAQQQYLAGACDVYTTDASGLAATRATFENPGDHVLLPEIISKEPLGPLVRHGDNEWGDV 256 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT A++TAEELGIT NI++++ T NP++ R LG + + +GE LGL W R I Sbjct: 257 VRWTLNALITAEELGITSANIDEMASGTENPEINRLLGSEGT--LGEMLGLDAQWALRAI 314 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + GNYGE+F +N+G ++ + + RG NA W+ GGL+Y+PP R Sbjct: 315 KAGGNYGEVFAKNIGEETPIGLARGLNAQWTDGGLLYSPPFR 356 >gi|311108521|ref|YP_003981374.1| general L-amino acid-binding periplasmic protein AapJ 2 [Achromobacter xylosoxidans A8] gi|310763210|gb|ADP18659.1| general L-amino acid-binding periplasmic protein AapJ 2 [Achromobacter xylosoxidans A8] Length = 338 Score = 415 bits (1066), Expect = e-114, Method: Composition-based stats. Identities = 145/342 (42%), Positives = 222/342 (64%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M++ + +I L + +S + L ++KRG+L+CG++TG+ GF+ + G W G D Sbjct: 1 MHRRTY-AICALALAAVSSQAFAGPTLDTVRKRGYLQCGVSTGIQGFSAPDSKGTWHGLD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD CRA+++ +F+D +K + PL + RF ALQS ++D+L+RN T+ R+ +LGL Sbjct: 60 VDMCRAIAATVFNDATKYRLTPLTTQARFTALQSGEVDVLTRNVTPTMARDTTLGLLSVA 119 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+D QG ++ K G+ + +L GA++CVQ GT TEL LAD+F++ ++++ P+V E+ + Sbjct: 120 VNYYDSQGVMVSDKLGVKKLRELDGATVCVQPGTVTELDLADWFRSQSLRFKPVVIEKYD 179 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 EI A+ A RCDA+T D S L A ++T + P +VIL + ISKSPL P + QGD W NI Sbjct: 180 EIVRAFSAGRCDAFTSDKSQLAASRMTLENPESYVILDENISKSPLGPMVRQGDDNWINI 239 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V W+ AM+ AEE GIT N++ K +P+VQR LG+ + +G +G+ W Y I+ Sbjct: 240 VRWSLNAMLEAEEFGITSSNVDAQLK-ANSPNVQRILGV--TPGMGRNMGVDDKWAYNIV 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE ++RNLG S +K+PR NA W GGLMY P+R Sbjct: 297 KQVGNYGESYERNLGMSSPMKLPRALNAQWRDGGLMYGWPVR 338 >gi|89110028|ref|AP_003808.1| predicted amino-acid transporter subunit [Escherichia coli str. K-12 substr. W3110] gi|170082796|ref|YP_001732116.1| amino-acid ABC transporter periplasmic-binding protein [Escherichia coli str. K-12 substr. DH10B] gi|218702040|ref|YP_002409669.1| amino-acid ABC transporter periplasmic-binding protein [Escherichia coli IAI39] gi|254163203|ref|YP_003046311.1| putative amino-acid transporter subunit [Escherichia coli B str. REL606] gi|606209|gb|AAA58072.1| ORF_o305; frameshift upstream would extend start [Escherichia coli str. K-12 substr. MG1655] gi|85676059|dbj|BAE77309.1| predicted amino-acid transporter subunit [Escherichia coli str. K12 substr. W3110] gi|169890631|gb|ACB04338.1| predicted amino-acid transporter subunit; periplasmic-binding component of ABC superfamily [Escherichia coli str. K-12 substr. DH10B] gi|218372026|emb|CAR19884.1| amino-acid transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli IAI39] gi|242378802|emb|CAQ33594.1| yhdW, subunit of YhdW/YhdX/YhdY/YhdZ ABC transporter [Escherichia coli BL21(DE3)] gi|253975104|gb|ACT40775.1| predicted amino-acid transporter subunit [Escherichia coli B str. REL606] gi|253979260|gb|ACT44930.1| predicted amino-acid transporter subunit [Escherichia coli BL21(DE3)] gi|309703687|emb|CBJ03028.1| Putative ABC transporter, substrate-binding protein [Escherichia coli ETEC H10407] gi|315137851|dbj|BAJ45010.1| extracellular solute-binding protein [Escherichia coli DH1] Length = 305 Score = 414 bits (1065), Expect = e-114, Method: Composition-based stats. Identities = 149/307 (48%), Positives = 216/307 (70%), Gaps = 2/307 (0%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 ++CGI+ GL GF+ A+G + G DVD CR +++A+F D +K++Y PL AKERF ALQS Sbjct: 1 MQCGISDGLPGFSYADADGKFSGIDVDICRGVAAAVFGDDTKVKYTPLTAKERFTALQSG 60 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 ++D+LSRNT WT R+ +G+AF +TY+DG GF+ H K G+ S +L GA++C+QAGT Sbjct: 61 EVDLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTD 120 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215 TEL +ADYFKA+NMKY P+ F+R +E A + RCD D S LYAL++ P+E + Sbjct: 121 TELNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPAEWI 180 Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 +LP++ISK PL P + +GD EW++IV WT +AM+ AEE+GI +N+++ + + PD+ Sbjct: 181 VLPEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAH 240 Query: 276 FLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGL 335 LG + + G+ L L W Y II+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ Sbjct: 241 LLGKEG--DYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGI 298 Query: 336 MYAPPIR 342 YAPP+R Sbjct: 299 QYAPPVR 305 >gi|84515667|ref|ZP_01003028.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Loktanella vestfoldensis SKA53] gi|84510109|gb|EAQ06565.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Loktanella vestfoldensis SKA53] Length = 339 Score = 414 bits (1065), Expect = e-113, Method: Composition-based stats. Identities = 152/343 (44%), Positives = 220/343 (64%), Gaps = 5/343 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ L + L T+ +A+ L D+K RG LKCG N GL GFA ANG+W+GFD Sbjct: 1 MTKTVFIGALAVAGL--TAGIASAATLDDVKARGSLKCGSNEGLAGFAAPDANGNWEGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ D ++++PL ++ RF AL + ++D+L RN+ WT R+ L L F Sbjct: 59 VSLCRAIAAAVLGDGQAVEFVPLTSQTRFTALAAGEVDVLVRNSTWTFTRDTDLALDFPA 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 I Y+DGQGF++ + G+SS ++L GA++C+Q GTTTEL LADYF+A+ + Y P+ Sbjct: 119 INYYDGQGFMVPRALGVSSAAELDGATVCIQTGTTTELNLADYFRANGISYEPVPVATNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT DIS L A + T + P +HVILP+++SK PL PA+ GD W +I Sbjct: 179 EGQQQYLAGACDVYTTDISGLAATRATFEAPGDHVILPEVVSKEPLGPAVRHGDNAWGDI 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKD-TTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 V WT +A+V AEE G+T+ N+ +++ T NP+V R LG + +G +GL DW ++ Sbjct: 239 VRWTTHALVAAEEYGVTKANVAELAAAPTDNPEVNRLLGTEGE--LGAMIGLDADWAVKV 296 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + GNYGE+F+ N+G + + + RG NA W+ GGLMY P R Sbjct: 297 LSVAGNYGEIFEANIGESTAVGLARGLNAQWTDGGLMYGGPFR 339 >gi|83854941|ref|ZP_00948471.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Sulfitobacter sp. NAS-14.1] gi|83941464|ref|ZP_00953926.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Sulfitobacter sp. EE-36] gi|83842784|gb|EAP81951.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Sulfitobacter sp. NAS-14.1] gi|83847284|gb|EAP85159.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Sulfitobacter sp. EE-36] Length = 347 Score = 414 bits (1064), Expect = e-113, Method: Composition-based stats. Identities = 157/342 (45%), Positives = 220/342 (64%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F L + + + AS L D+K RG L CG+ TGL GFA ANG+W+GFD Sbjct: 10 MNKSVFFG--ALTVAGLAAGAAAASTLDDVKARGKLNCGVTTGLAGFAAPNANGEWEGFD 67 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ DP+ ++++P K RF AL S +ID L+RNT WT R++ L F Sbjct: 68 VAVCRAVAAAVLGDPAAVEFIPTTGKTRFTALASGEIDFLARNTTWTFSRDVDLKFDFIG 127 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K+ G+SS L GA++C+Q GTTTEL LAD+F+ +N+ Y P+ E Sbjct: 128 VNYYDGQGFMVPKELGVSSAKDLDGATVCIQTGTTTELNLADFFRNNNISYEPVPVETNA 187 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT D S L A + T + P EH+ILP+IISK PL P + GD +W ++ Sbjct: 188 EGQQQYLAGACDTYTTDASGLAATRATFENPGEHIILPEIISKEPLGPLVRHGDNDWGDV 247 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 W YA++ AEELG+T N+ +++ +TTNP+V R LG + + +GE LGL DW + I Sbjct: 248 TRWVLYALIAAEELGVTSANVEEMTTNTTNPEVARLLGTEGT--LGEMLGLEADWAKKAI 305 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F +N+G ++ + + RG NA W+ GGLMYAPP R Sbjct: 306 ASQGNYGEIFAKNIGEETPIGLARGLNAQWTDGGLMYAPPFR 347 >gi|148252293|ref|YP_001236878.1| general L-amino acid-binding periplasmic protein [Bradyrhizobium sp. BTAi1] gi|146404466|gb|ABQ32972.1| amino acid ABC transporter substrate-binding protein, PAAT family [Bradyrhizobium sp. BTAi1] Length = 345 Score = 414 bits (1064), Expect = e-113, Method: Composition-based stats. Identities = 163/317 (51%), Positives = 229/317 (72%), Gaps = 3/317 (0%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L +RG + CG+N GL GF+ G+W GFDVDFCRA+++AIFDDP K +++PL+A Sbjct: 32 TLKRTVRRGEVLCGVNAGLPGFSIPDDKGNWTGFDVDFCRAVAAAIFDDPKKAKFVPLDA 91 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 ERF LQS+++DILSRNT W++ RE + L F + Y+DGQGF++ + + + + L+G Sbjct: 92 NERFKELQSRKVDILSRNTTWSMAREQNYDLYFPAVAYYDGQGFMVPRSRKLETALDLNG 151 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 + +CVQ TT L LADYF+A+NMKY I F +++++ AY + +CD +T D+S LYAL+ Sbjct: 152 SKVCVQDSTTNALNLADYFRANNMKYEEIKFLKLDDVLKAYDSGKCDTFTADVSQLYALR 211 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 L +P++H ILPD+ISK PLAP + Q D +W IV WT YAM+ AEELG+T KNI++ Sbjct: 212 LVLTKPNDHDILPDMISKEPLAPVVRQRDDDWMMIVKWTLYAMINAEELGVTSKNIDEAL 271 Query: 266 KDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRG 325 K + PDV R +G + + G+ LGL KDW RIIRH+GNYGE+++RN+G++S+LKIPRG Sbjct: 272 K-SKKPDVMRLVGNEGT--YGQDLGLAKDWAARIIRHVGNYGEVYERNIGSESKLKIPRG 328 Query: 326 YNALWSKGGLMYAPPIR 342 N LW+ GG+ YAPPIR Sbjct: 329 MNQLWNAGGIQYAPPIR 345 >gi|254477415|ref|ZP_05090801.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Ruegeria sp. R11] gi|214031658|gb|EEB72493.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Ruegeria sp. R11] Length = 338 Score = 413 bits (1063), Expect = e-113, Method: Composition-based stats. Identities = 155/342 (45%), Positives = 221/342 (64%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M F+ L + + + A L D+K RG L CG+ TGLVGFA ANG+W+GFD Sbjct: 1 MKNKVFLG--ALTVAGLAAGAAAAGTLDDVKARGKLNCGVTTGLVGFAAPNANGEWEGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ D + ++++P K RF AL S +ID+L+RNT WT R++ L F Sbjct: 59 VAVCRAVAAAVLGDSTAVEFVPTTGKTRFTALASGEIDMLARNTTWTFSRDVDLKFEFVG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 I Y+DGQGF++ K G+SS +L GA++C+Q GTTTEL LAD+F+++N+ Y P+ E Sbjct: 119 INYYDGQGFMVPKDLGVSSAKELDGATVCIQTGTTTELNLADFFRSNNISYEPVPIETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT D S L A + T D P+ HV+LP+IISK PL P + GD EW ++ Sbjct: 179 EAQQQYLAGACDVYTTDASGLAATRATFDDPAGHVLLPEIISKEPLGPLVRHGDHEWGDV 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V W+ A++ AEELG+T NIN+++ T NP++ R LG + + +GE LGL+ DW + Sbjct: 239 VRWSLNALIAAEELGVTSANINEMAAGTENPEINRLLGTEGT--LGEMLGLSADWAKNAV 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F +N+G + + + RG NA W++GGL+YAPP R Sbjct: 297 AAGGNYGEVFAKNIGEDTPIGLARGLNAQWTEGGLLYAPPFR 338 >gi|320184061|gb|EFW58881.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Shigella flexneri CDC 796-83] Length = 349 Score = 413 bits (1063), Expect = e-113, Method: Composition-based stats. Identities = 157/351 (44%), Positives = 235/351 (66%), Gaps = 11/351 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K ++ +L + +A + L ++K+GF++CGI+ GL+GF+ A+G + G Sbjct: 1 MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLLGFSYADADGKFSGI 60 Query: 60 DVDF--------CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 DVD CR++++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ Sbjct: 61 DVDVDVDVDVDVCRSVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRD 120 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 +G+AF +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY Sbjct: 121 AGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKY 180 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 P+ F+R +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + Sbjct: 181 TPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVR 240 Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGL 291 +GD EW++IV WT +AM+ AEE+GI +N+++ + + PD+ LG + + G+ L L Sbjct: 241 RGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKEG--DYGKDLKL 298 Query: 292 TKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 W Y II+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 DNKWAYNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 349 >gi|15803803|ref|NP_289837.1| putative periplasmic binding transport protein [Escherichia coli O157:H7 EDL933] gi|209920741|ref|YP_002294825.1| amino acid ABC transporter substrate binding component [Escherichia coli SE11] gi|218555833|ref|YP_002388746.1| amino-acid ABC transporter periplasmic-binding protein [Escherichia coli IAI1] gi|218696968|ref|YP_002404635.1| amino-acid transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli 55989] gi|218706883|ref|YP_002414402.1| amino-acid ABC transporter periplasmic-binding protein [Escherichia coli UMN026] gi|12517899|gb|AAG58397.1|AE005554_8 putative periplasmic binding transport protein [Escherichia coli O157:H7 str. EDL933] gi|13363614|dbj|BAB37564.1| putative periplasmic binding transport protein [Escherichia coli O157:H7 str. Sakai] gi|209757458|gb|ACI77041.1| putative periplasmic binding transport protein [Escherichia coli] gi|209757460|gb|ACI77042.1| putative periplasmic binding transport protein [Escherichia coli] gi|209757462|gb|ACI77043.1| putative periplasmic binding transport protein [Escherichia coli] gi|209757464|gb|ACI77044.1| putative periplasmic binding transport protein [Escherichia coli] gi|209757466|gb|ACI77045.1| putative periplasmic binding transport protein [Escherichia coli] gi|209914000|dbj|BAG79074.1| amino acid ABC transporter substrate binding component [Escherichia coli SE11] gi|218353700|emb|CAU99962.1| amino-acid transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli 55989] gi|218362601|emb|CAR00226.1| amino-acid transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli IAI1] gi|218433980|emb|CAR14897.1| amino-acid transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli UMN026] Length = 305 Score = 413 bits (1063), Expect = e-113, Method: Composition-based stats. Identities = 149/307 (48%), Positives = 216/307 (70%), Gaps = 2/307 (0%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 ++CGI+ GL GF+ A+G + G DVD CR +++A+F D +K++Y PL AKERF ALQS Sbjct: 1 MQCGISDGLPGFSYADADGKFSGIDVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSG 60 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 ++D+LSRNT WT R+ +G+AF +TY+DG GF+ H K G+ S +L GA++C+QAGT Sbjct: 61 EVDLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTD 120 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215 TEL +ADYFKA+NMKY P+ F+R +E A + RCD D S LYAL++ P+E + Sbjct: 121 TELNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPAEWI 180 Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 +LP++ISK PL P + +GD EW++IV WT +AM+ AEE+GI +N+++ + + PD+ Sbjct: 181 VLPEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAH 240 Query: 276 FLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGL 335 LG + + G+ L L W Y II+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ Sbjct: 241 LLGKEG--DYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGI 298 Query: 336 MYAPPIR 342 YAPP+R Sbjct: 299 QYAPPVR 305 >gi|88797541|ref|ZP_01113130.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Reinekea sp. MED297] gi|88779713|gb|EAR10899.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Reinekea sp. MED297] Length = 331 Score = 413 bits (1063), Expect = e-113, Method: Composition-based stats. Identities = 157/331 (47%), Positives = 221/331 (66%), Gaps = 3/331 (0%) Query: 11 CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70 + L AS L D++K GFLKCG++TG+ GF+ NG+W G DVD CRA+++A Sbjct: 3 VAVALSLAFSLAQASTLNDVRKTGFLKCGVSTGIPGFSNPDRNGNWTGLDVDVCRAVAAA 62 Query: 71 IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130 + + K++Y+PL +RF ALQS +ID+LSR T WT R+ +L + F ++++DGQGF+ Sbjct: 63 VLGNAEKVRYIPLTPGDRFNALQSGEIDVLSRITTWTHSRDTTLDIIFAGVSFYDGQGFM 122 Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190 + + GI S +L GA+ICVQ GTTTE LADYF+ H ++Y P+ F + ++A R Sbjct: 123 VREDAGIRSPQELDGAAICVQKGTTTEQNLADYFREHGLRYQPVSFTSSDRAINGFKAGR 182 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 C A T D S LYA + D PS ILP +ISK PL PA+ Q D +WYNIV W +A+V Sbjct: 183 CSAVTSDRSQLYAQRTKLDDPSSARILPTVISKEPLGPAVRQDDMQWYNIVKWCLFALVN 242 Query: 251 AEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMF 310 AEELG+T N++++ K + P VQR LG+ +S+ G A+GL DW Y II +GNY E++ Sbjct: 243 AEELGVTSANVDEMRK-SNKPVVQRLLGV--NSDTGRAMGLASDWGYNIISQVGNYQEIY 299 Query: 311 DRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341 D N+G SEL+I RG N+LWSKGG+++APP+ Sbjct: 300 DGNVGKDSELEIDRGLNSLWSKGGILFAPPL 330 >gi|259416581|ref|ZP_05740501.1| glutamate/glutamine/aspartate/asparagine-binding protein bztAprecursor [Silicibacter sp. TrichCH4B] gi|259348020|gb|EEW59797.1| glutamate/glutamine/aspartate/asparagine-binding protein bztAprecursor [Silicibacter sp. TrichCH4B] Length = 335 Score = 413 bits (1063), Expect = e-113, Method: Composition-based stats. Identities = 143/334 (42%), Positives = 212/334 (63%), Gaps = 3/334 (0%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 L + ++ ++ + A L ++K+RG L CG+ GL GFA + +G W G +V FCRAL++ Sbjct: 4 LTVALVALSAGTAMAGTLEEVKERGKLICGVYPGLPGFAFLSEDGTWMGSEVAFCRALAA 63 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 A+ DP+ ++++P +K RF AL S ++D+L+RNT WT R++ L F + Y+DGQGF Sbjct: 64 AVLKDPTAVEFVPTPSKTRFTALASGEVDVLARNTTWTFSRDVDLKFEFAGVNYYDGQGF 123 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 ++ K+ G++S +L GA++C+Q GTTTEL LAD+F+A+ + Y P+ E E Y A Sbjct: 124 LVPKELGVTSAKELDGATVCIQTGTTTELNLADFFRANGISYEPVPVETNAESQQQYLAG 183 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 CD YT D + L A + P H+ILP+ ISK PL P + GD +W ++V WT A++ Sbjct: 184 ACDVYTTDKAGLAATRSAFADPQNHLILPETISKEPLGPLVRHGDNQWGDVVRWTLNALI 243 Query: 250 TAEELGITQKNINQVSKD-TTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGE 308 AEELGITQ N+ ++ T NP++ R LG + + GE LGL +DW I GNYGE Sbjct: 244 IAEELGITQDNVTALAASATNNPEINRMLGTEGT--YGEMLGLDQDWAVAAISAGGNYGE 301 Query: 309 MFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +F R LG + + + RG NAL+ GG++YAPP R Sbjct: 302 IFARFLGEDTLIGLDRGLNALYRDGGILYAPPFR 335 >gi|282897630|ref|ZP_06305630.1| extracellular solute-binding protein, family 3 [Raphidiopsis brookii D9] gi|281197553|gb|EFA72449.1| extracellular solute-binding protein, family 3 [Raphidiopsis brookii D9] Length = 351 Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats. Identities = 154/354 (43%), Positives = 232/354 (65%), Gaps = 15/354 (4%) Query: 1 MYKDFFVSILCLIILFFTSF------------STNASILGDIKKRGFLKCGINTGLVGFA 48 M K F ++ +I + + +K L CG++ L GF+ Sbjct: 1 MAKSFLFLVVGPLIFALLGCNSSPSSSTSTSTAQPRNTTDKVKTNLRLVCGVSGELPGFS 60 Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 V+ +G + G DVD CRA+++A+FD+P K+++ L+AKERF ALQ+ +ID+LSRNT WT Sbjct: 61 FVQTDGKYAGIDVDVCRAVAAALFDNPDKVEFRNLSAKERFTALQTGEIDLLSRNTTWTF 120 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168 R+ S+GL F P+ +DGQG ++ K GI+S++ L +IC Q GTTTE LAD + Sbjct: 121 SRDTSMGLYFSPVVLYDGQGIMIRKNSGINSLADLKNKAICTQTGTTTEQNLADQMRKRG 180 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 + Y P+VFE + A Y RCDA T D SAL + + T +P +++IL +++S PLAP Sbjct: 181 ISYKPVVFEDINVTFATYSEGRCDAVTADRSALISRRTTLPKPEDNIILNELLSSEPLAP 240 Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEA 288 A+ QGD +W NIV W+ YA++ AEELGI +NI+Q + ++ +P+++RFLG + N+G+ Sbjct: 241 AVAQGDPQWNNIVKWSVYALIKAEELGINSQNISQFA-NSKDPEIKRFLGTEG--NLGKG 297 Query: 289 LGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GLT D+ RII+H+GNYGE++DRNLG++++L +PRG N L+SKGGL+Y+PP R Sbjct: 298 IGLTNDFAARIIKHVGNYGEIYDRNLGSKTKLNLPRGQNELYSKGGLLYSPPFR 351 >gi|281180310|dbj|BAI56640.1| amino acid ABC transporter substrate binding component [Escherichia coli SE15] Length = 305 Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats. Identities = 149/307 (48%), Positives = 216/307 (70%), Gaps = 2/307 (0%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 ++CGI+ GL GF+ A+G + G DVD CR +++A+F D +K++Y PL AKERF ALQS Sbjct: 1 MQCGISDGLPGFSYADADGKFSGIDVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSG 60 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 ++D+LSRNT WT R+ +G+AF +TY+DG GF+ H K G+ S +L GA++C+QAGT Sbjct: 61 EVDLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTD 120 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215 TEL +ADYFKA+NMKY P+ F+R +E A + RCD D S LYAL++ P+E + Sbjct: 121 TELNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPTEWI 180 Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 +LP++ISK PL P + +GD EW++IV WT +AM+ AEE+GI +N+++ + + PD+ Sbjct: 181 VLPEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAH 240 Query: 276 FLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGL 335 LG + + G+ L L W Y II+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ Sbjct: 241 LLGKEG--DYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGI 298 Query: 336 MYAPPIR 342 YAPP+R Sbjct: 299 QYAPPVR 305 >gi|218550552|ref|YP_002384343.1| amino-acid ABC transporter periplasmic-binding protein [Escherichia fergusonii ATCC 35469] gi|218358093|emb|CAQ90739.1| amino-acid transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia fergusonii ATCC 35469] Length = 305 Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats. Identities = 148/307 (48%), Positives = 216/307 (70%), Gaps = 2/307 (0%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 ++CGI+ GL GF+ A+G + G DVD CR +++A+F D +K++Y PL AKERF ALQS Sbjct: 1 MQCGISDGLPGFSYADADGKFSGIDVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSG 60 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 ++D+LSRNT WT R+ +G+AF +TY+DG GF+ H K G+ S +L GA++C+QAGT Sbjct: 61 EVDLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTD 120 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215 TEL +ADYFKA+NMKY P+ F+R +E A + RCD D S LYAL++ P+E + Sbjct: 121 TELNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPAEWI 180 Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 +LP++ISK PL P + +GD EW++IV WT +AM+ AEE+G+ +N+++ + + PD+ Sbjct: 181 VLPEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGVNSQNVDEKAANPATPDMAH 240 Query: 276 FLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGL 335 LG + + G+ L L W Y II+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ Sbjct: 241 LLGKEG--DYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGI 298 Query: 336 MYAPPIR 342 YAPP+R Sbjct: 299 QYAPPVR 305 >gi|259415913|ref|ZP_05739833.1| glutamate/glutamine/aspartate/asparagine-binding protein bztAprecursor [Silicibacter sp. TrichCH4B] gi|259347352|gb|EEW59129.1| glutamate/glutamine/aspartate/asparagine-binding protein bztAprecursor [Silicibacter sp. TrichCH4B] Length = 378 Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats. Identities = 158/342 (46%), Positives = 220/342 (64%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M F L + + + A L D+K R L CG++TGLVGF+ ANG+W+GFD Sbjct: 41 MNNSVFFG--ALTVAGLAAGAAAAGTLDDVKARDKLNCGVSTGLVGFSAPNANGEWEGFD 98 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 + CRA+++A+ DPSK++Y+P K RF AL S ++D+L+RNT WT R++ L F Sbjct: 99 IAVCRAVAAAVLGDPSKVEYVPTTGKTRFTALASGEVDVLARNTTWTFSRDVDLKFEFIG 158 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K+ G+SS +L GA++C+Q GTTTEL LAD+F+A+N+ Y P+ E Sbjct: 159 VNYYDGQGFMIPKELGVSSAKELDGATVCIQTGTTTELNLADFFRANNISYEPVPIETNA 218 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT D S L A + T D PS HVILP+IISK PL P + GD EW ++ Sbjct: 219 EARQQYLAGACDVYTTDASGLAATRATFDDPSNHVILPEIISKEPLGPLVRHGDNEWGDV 278 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT A+V AEELGIT N+++ + T NP++ R LG + N+GE LGL DW + + Sbjct: 279 VRWTLNALVAAEELGITSANMSEKAAGTDNPEINRLLGSEG--NLGEMLGLDADWAQKAL 336 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F + +G + + + RG NA W+ GGL+YAPP R Sbjct: 337 AAGGNYGEIFAKTIGEDTPVGLARGLNAQWTDGGLLYAPPFR 378 >gi|75906963|ref|YP_321259.1| extracellular solute-binding protein [Anabaena variabilis ATCC 29413] gi|75700688|gb|ABA20364.1| L-glutamate-binding protein / L-aspartate-binding protein / neutral amino acid-binding protein [Anabaena variabilis ATCC 29413] Length = 356 Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats. Identities = 157/357 (43%), Positives = 225/357 (63%), Gaps = 18/357 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILG---------------DIKKRGFLKCGINTGLV 45 M K + LI +A IK RG L CG++ + Sbjct: 3 MNKLVIILGASLIFTTTACGGDSAPTTDASTNSGGTLVANRWNTIKNRGQLICGVSGEVP 62 Query: 46 GFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105 GF+ V NG++ G DVD CRA+++A+FD+P +++ L+AKERF ALQ+ ++DILSRNT Sbjct: 63 GFSFVGTNGEYSGIDVDVCRAIAAALFDNPDAVEFRNLSAKERFTALQTGEVDILSRNTT 122 Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165 WTL R S+GL F P+ ++DGQ ++ K I S++ L +ICVQ GTTTE LAD + Sbjct: 123 WTLSRATSVGLEFAPVVFYDGQAIMVRKNSAIKSLADLKDKAICVQTGTTTEQNLADQMR 182 Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225 N+ Y P+VFE V A Y RCDA T D SAL + + T +P ++V+L ++IS P Sbjct: 183 KRNITYKPVVFEDVNVTFATYAEGRCDAITADRSALVSRRTTLPKPEDNVVLDEVISSEP 242 Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNI 285 LAPA+ +GD +W + V+W YA++ EELGI +N+ Q + + +PDV+RFLG + ++ Sbjct: 243 LAPAVAKGDAKWSDTVNWVVYALIKGEELGINSQNLGQFT-TSNDPDVKRFLGTEG--DL 299 Query: 286 GEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 G+ LGLT D+ RII+H+GNYGE++DRNLG +++L + RG N LWSKGGL+Y+PP R Sbjct: 300 GQGLGLTNDFAARIIKHVGNYGELYDRNLGPKTKLNLARGQNQLWSKGGLLYSPPFR 356 >gi|126737042|ref|ZP_01752777.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Roseobacter sp. SK209-2-6] gi|126721627|gb|EBA18330.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Roseobacter sp. SK209-2-6] Length = 338 Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats. Identities = 155/342 (45%), Positives = 223/342 (65%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M F+ L + + + A L D+K RG L CG+ TGLVGFA ANG+W+GFD Sbjct: 1 MKNTVFLG--ALTVAGLAAGAAAAGTLDDVKARGKLNCGVTTGLVGFAAPNANGEWEGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A D + ++++P K RF AL S +ID+L+RNT WT R++ L F Sbjct: 59 VAVCRAVAAAALGDSTAVEFVPTTGKTRFTALASGEIDMLARNTTWTFSRDVDLKFEFTG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K+ G+SS +L GA++C+Q GTTTEL LAD+F+++N+ Y P+ E Sbjct: 119 VNYYDGQGFMVPKELGVSSAKELDGATVCIQTGTTTELNLADFFRSNNISYEPVPIETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT D S L A + T D P++HV+LP+IISK PL P + GD EW ++ Sbjct: 179 EAQQQYLAGACDVYTTDASGLAATRATFDAPADHVLLPEIISKEPLGPLVRHGDHEWGDV 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT A++TAEELG+T NI ++S T+NP++ R LG + + +GE LGL+ DW + Sbjct: 239 VRWTLNALITAEELGVTSANIAEMSAGTSNPEINRLLGTEGT--LGEMLGLSADWGKNAV 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F +N+G + + + RG NA W++GGL+Y+PP R Sbjct: 297 AAGGNYGEVFAKNIGEDTPIGLARGLNAQWTEGGLLYSPPFR 338 >gi|330429592|gb|AEC20926.1| putative ABC transporter periplasmic amino acid-binding protein [Pusillimonas sp. T7-7] Length = 338 Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats. Identities = 146/341 (42%), Positives = 218/341 (63%), Gaps = 3/341 (0%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K + L + F + S +K +GF++CG +T L GF+ + G W G D+ Sbjct: 1 MKLIKAAALGASLFFAAATSQAGETYDAVKAKGFVQCGTHTALPGFSIADSKGVWSGIDI 60 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D C+A+++ +F D +K + P+ ++RF ALQS +ID+L+RNT T+ R+ +LGL + Sbjct: 61 DLCKAIATMMFGDATKFKTTPVTTQQRFTALQSGEIDVLTRNTTATMTRDTTLGLMSAGV 120 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y+D QG ++ K+ G+ S +LSGA++CVQ GTTTEL LAD+F+A+N+ + P+V +E Sbjct: 121 NYYDSQGIMVSKELGVKSAKELSGAAVCVQPGTTTELNLADWFRANNLDFKPVVINSPDE 180 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +Y A RCDA+T D S L ++ T P +HVILP+ SK PL P + QGD +W+ +V Sbjct: 181 AMRSYVAGRCDAFTTDKSGLATIRTTLANPDDHVILPEDFSKEPLGPMVRQGDDQWFMVV 240 Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301 W M+ AEE GIT KN++++ K ++NP++QR LG+ + +G+ LGL W Y +I+ Sbjct: 241 RWALNTMLEAEEYGITSKNVDEMLK-SSNPNIQRILGV--TGEMGKGLGLDNKWAYNLIK 297 Query: 302 HMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGE F+RNLG S +K+ RG NA W GGLMY PIR Sbjct: 298 QVGNYGESFERNLGAGSAMKLERGINAQWRDGGLMYGWPIR 338 >gi|242280380|ref|YP_002992509.1| extracellular solute-binding protein family 3 [Desulfovibrio salexigens DSM 2638] gi|242123274|gb|ACS80970.1| extracellular solute-binding protein family 3 [Desulfovibrio salexigens DSM 2638] Length = 336 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 150/338 (44%), Positives = 225/338 (66%), Gaps = 5/338 (1%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F S +CL+I+ S A L ++KK GFLK G + GF+ + +NG GFDVDF Sbjct: 4 FRTSFICLMIVAMASI-AQAGTLDNVKKDGFLKAGTHIENPGFSALDSNGKRVGFDVDFI 62 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 RA+++A+ +I+Y PL +KER ALQS +IDILSR T T+ R++ LGL F T + Sbjct: 63 RAVAAAVNVP--EIKYTPLTSKERLPALQSGEIDILSRTTTHTMSRDVKLGLDFTVTTLY 120 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 DGQG ++ K+ GI+ L GA++C+Q G+TTEL ++D+F+ + M + P+VF++ ++ Sbjct: 121 DGQGMMVRKELGITDAKDLDGATVCLQTGSTTELNISDFFRKNGMSFTPVVFDKQPDVRK 180 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 AY RCD +T D+S L A + ++P+EH+IL ++ISK PL P + GD +W +IV WT Sbjct: 181 AYDTGRCDVHTTDVSGLAAQRSLMEKPAEHIILSEVISKEPLGPVVRHGDNQWSDIVRWT 240 Query: 245 HYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMG 304 + + AEE G+TQ N+ ++ ++ +P+VQR LG K+ ++ LGL KD RII+ +G Sbjct: 241 IWLTMAAEEKGVTQANVEKMFANSKDPEVQRMLG--KTGSLWTDLGLDKDAPVRIIKTVG 298 Query: 305 NYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 NYGE+FDRNLG ++ L++ RG N W++GGL+YAPP R Sbjct: 299 NYGEIFDRNLGPKTPLRMERGLNKQWNEGGLIYAPPFR 336 >gi|218560337|ref|YP_002393250.1| amino-acid transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli S88] gi|218367106|emb|CAR04880.1| amino-acid transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli S88] Length = 305 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 148/307 (48%), Positives = 216/307 (70%), Gaps = 2/307 (0%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 ++CGI+ GL GF+ A+G + G DVD CR +++A+F D +K++Y PL AKERF ALQS Sbjct: 1 MQCGISDGLPGFSYADADGKFSGIDVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSG 60 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 ++D+LSRNT WT R+ +G+AF +TY+DG GF+ H K G+ S +L GA++C+QAGT Sbjct: 61 EVDLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTD 120 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215 TEL +ADYFKA+NMKY P+ F+R +E A + RCD D S LYAL++ P+E + Sbjct: 121 TELNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPAEWI 180 Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 +LP++ISK PL P + +GD EW++IV WT +AM+ AEE+GI +N+++ + + PD+ Sbjct: 181 VLPEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAH 240 Query: 276 FLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGL 335 LG + + G+ L L W + II+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ Sbjct: 241 LLGKEG--DYGKDLKLDNKWAFNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGI 298 Query: 336 MYAPPIR 342 YAPP+R Sbjct: 299 QYAPPVR 305 >gi|293602358|ref|ZP_06684804.1| ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] gi|292819120|gb|EFF78155.1| ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] Length = 358 Score = 411 bits (1058), Expect = e-113, Method: Composition-based stats. Identities = 145/318 (45%), Positives = 219/318 (68%), Gaps = 4/318 (1%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 + +++RG + CG TG GF+ A G W+G DVD CRA+++A+F D +KI+ +PLN+ Sbjct: 44 TVDVVRQRGAVACGTTTGFAGFSAPDAQGKWQGLDVDLCRAIAAAVFGDANKIKVVPLNS 103 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 ++RF ALQS ++D+L+RNT T R+ +LG+ I ++DGQGF++ K G+ S +++G Sbjct: 104 QQRFTALQSGEVDVLTRNTTVTQQRDTALGIIHAGINFYDGQGFLVPKSLGVKSAKEING 163 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 A+IC+Q GT+ E TLAD+ +A+N+ Y P+V E E+ A+ A RCD ++ D S L +++ Sbjct: 164 ATICLQTGTSNENTLADWARANNVTYKPVVIETFNEVVNAFAAGRCDVFSTDASGLASIR 223 Query: 206 L-TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 + P ++V+LP+IISK PL P + QGD +W NIV W+ AM+ AEE G+T KN+++ Sbjct: 224 ISKLQNPDDYVVLPEIISKEPLGPFVRQGDDKWLNIVRWSLSAMIEAEEYGVTSKNVDEQ 283 Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324 ++ NP+++R LG+ + G LGL + W Y I++ +GNYGE FDRN+G S LKI R Sbjct: 284 L-NSANPNIKRILGV--TPGGGANLGLDEKWAYNIVKQVGNYGESFDRNVGEGSPLKIKR 340 Query: 325 GYNALWSKGGLMYAPPIR 342 G NA W++GGLMYA PIR Sbjct: 341 GLNAQWTQGGLMYALPIR 358 >gi|297624238|ref|YP_003705672.1| family 3 extracellular solute-binding protein [Truepera radiovictrix DSM 17093] gi|297165418|gb|ADI15129.1| extracellular solute-binding protein family 3 [Truepera radiovictrix DSM 17093] Length = 339 Score = 411 bits (1058), Expect = e-113, Method: Composition-based stats. Identities = 150/342 (43%), Positives = 220/342 (64%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F S LC++I FT L +++ RG L CG+N L GF V G+ +GFD Sbjct: 1 MRKWFVGSALCVLIASFTVAQAQG-KLAEVRNRGSLVCGVNDVLPGFGTVNEEGEHEGFD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDFC+A+++A+ D + Y PL+A+ERF A+Q+ ++D+L RNT WT R+ +GL F P Sbjct: 60 VDFCKAIAAAVLGDADAVTYRPLSAQERFTAVQTGEVDVLIRNTTWTSSRDTEVGLNFGP 119 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + ++DGQGF++ + GI S+ L G I VQ+GTTTEL LAD A +++Y P++FE + Sbjct: 120 VIFYDGQGFMVRRDSGIESLEDLEGRRIGVQSGTTTELNLADVMSALDIQYEPVIFETSD 179 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 ++ AAY DA+T D S L +L ++ P EH IL ISK PLAPA++ GD EWY++ Sbjct: 180 QLVAAYDDGAVDAWTTDKSGLASLLISLSDPEEHRILDATISKEPLAPAVLHGDDEWYDV 239 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V W + ++ AEE GIT +N+ ++++ +TNP++QR LG + S+ E +GL D I Sbjct: 240 VKWVIFGLMEAEEYGITSENVRELAETSTNPNIQRILGAEPSAV--EQIGLEADAIATAI 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGE+++RNLG + IPRG NA + +GGL+Y P R Sbjct: 298 EAVGNYGEIYERNLGEGTPFNIPRGLNAQYYEGGLIYGMPFR 339 >gi|218691562|ref|YP_002399774.1| amino-acid ABC transporter periplasmic-binding protein [Escherichia coli ED1a] gi|218429126|emb|CAR10069.2| amino-acid transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli ED1a] Length = 305 Score = 411 bits (1058), Expect = e-113, Method: Composition-based stats. Identities = 148/307 (48%), Positives = 216/307 (70%), Gaps = 2/307 (0%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 ++CGI+ GL GF+ A+G + G DVD CR +++A+F D +K++Y PL AKERF ALQS Sbjct: 1 MQCGISDGLPGFSYADADGKFSGIDVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSG 60 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 ++D+LSRNT WT R+ +G+AF +TY+DG GF+ H K G+ S +L GA++C+QAGT Sbjct: 61 EVDLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTD 120 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215 TEL +ADYFKA+NMKY P+ F+R +E A + RCD D S LYAL++ P+E + Sbjct: 121 TELNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPTEWI 180 Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 +LP++ISK PL P + +GD EW++IV WT +AM+ AEE+GI +N+++ + + PD+ Sbjct: 181 VLPEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAH 240 Query: 276 FLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGL 335 LG + + G+ L L W + II+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ Sbjct: 241 LLGKEG--DYGKDLKLDNKWAFNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGI 298 Query: 336 MYAPPIR 342 YAPP+R Sbjct: 299 QYAPPVR 305 >gi|171058819|ref|YP_001791168.1| extracellular solute-binding protein [Leptothrix cholodnii SP-6] gi|170776264|gb|ACB34403.1| extracellular solute-binding protein family 3 [Leptothrix cholodnii SP-6] Length = 339 Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats. Identities = 144/320 (45%), Positives = 219/320 (68%), Gaps = 3/320 (0%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 L IK+R + G++TG+ GF+ + G W G DVD RA+++A+ D K++++PL Sbjct: 22 GKTLDTIKQRDQILVGVSTGVAGFSAADSQGKWTGLDVDVGRAIAAAVLGDADKVKWVPL 81 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 + +RF A+QS ++D+LSRNT +TL R+ SLGL + ++DGQGF++ K + S QL Sbjct: 82 ASPQRFTAIQSGEVDVLSRNTTFTLTRDASLGLHQTAVVFYDGQGFMVPAKTKVKSAKQL 141 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 GA++CVQ+GTTTE L D+ +A+ + P+VF++++ +AAY + RC AYT D S L + Sbjct: 142 KGATVCVQSGTTTEKNLTDFSRANKLNLKPVVFDKLDAANAAYFSGRCQAYTTDASGLAS 201 Query: 204 LK-LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 ++ P +HVILP++ISK PL P + +GD EW+ IV W Y ++ AEE GITQ N++ Sbjct: 202 IRSKEAKDPKDHVILPELISKEPLGPLVRRGDDEWFAIVKWVVYGLIEAEESGITQANVD 261 Query: 263 QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKI 322 Q+ D+T+P VQR LG K+ + G+ LGL ++W R I+ +GNYGE+++RN+G ++ + + Sbjct: 262 QLKADSTDPVVQRLLG--KTEDTGKLLGLDREWLARAIKAVGNYGEIYERNVGEKTPVGL 319 Query: 323 PRGYNALWSKGGLMYAPPIR 342 PRG NALW+ GGL YA PIR Sbjct: 320 PRGKNALWTNGGLQYAMPIR 339 >gi|311109272|ref|YP_003982125.1| general L-amino acid-binding periplasmic protein AapJ 5 [Achromobacter xylosoxidans A8] gi|310763961|gb|ADP19410.1| general L-amino acid-binding periplasmic protein AapJ 5 [Achromobacter xylosoxidans A8] Length = 338 Score = 411 bits (1056), Expect = e-113, Method: Composition-based stats. Identities = 144/318 (45%), Positives = 218/318 (68%), Gaps = 4/318 (1%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L +++RG + CG TG GF+ A G W+G DVD CRA+++A+F D +KI+ +PLN+ Sbjct: 24 TLDVVRQRGAVACGTTTGFAGFSAPDAQGKWQGLDVDLCRAIAAAVFGDANKIKVVPLNS 83 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 ++RF ALQS ++D+L+RNT T R+ +LG+ I ++DGQGF++ K G+ S +++G Sbjct: 84 QQRFTALQSGEVDVLTRNTTVTQQRDTALGIIHAGINFYDGQGFLVPKSLGVKSAKEING 143 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 A+IC+Q GT+ E TLAD+ +A+N+ Y P+V E E+ A+ A RCD ++ D S L +++ Sbjct: 144 ATICLQTGTSNENTLADWARANNVSYKPVVIETFNEVVNAFAAGRCDVFSTDASGLASIR 203 Query: 206 L-TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 + P ++V+LP+IISK PL P + QGD W NIV W+ AM+ AEE G++ N+++ Sbjct: 204 ISKLQNPDDYVVLPEIISKEPLGPFVRQGDDAWLNIVRWSLSAMIEAEEYGVSSANVDEQ 263 Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324 +K + NP+++R LG+ + G LGL + W Y I++ +GNYGE F+RN+G S LKI R Sbjct: 264 AK-SANPNIKRILGV--TPGGGANLGLDEKWAYNIVKQVGNYGESFERNVGQGSPLKIKR 320 Query: 325 GYNALWSKGGLMYAPPIR 342 G NA W++GGLMYA PIR Sbjct: 321 GLNAQWTQGGLMYALPIR 338 >gi|86751771|ref|YP_488267.1| extracellular solute-binding protein [Rhodopseudomonas palustris HaA2] gi|86574799|gb|ABD09356.1| extracellular solute-binding protein, family 3 [Rhodopseudomonas palustris HaA2] Length = 341 Score = 411 bits (1056), Expect = e-113, Method: Composition-based stats. Identities = 164/317 (51%), Positives = 226/317 (71%), Gaps = 6/317 (1%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L +R + CG+N GL GF+ G+W GFDVDFCRA+++AIF+DP+K++++PL+A Sbjct: 31 TLKRTIRRDAVLCGVNKGLPGFSTPDEKGNWTGFDVDFCRAVAAAIFNDPNKVKFVPLDA 90 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 ERF LQS+++DILSRN+ W++ RE L F + Y+DG+GF++ + I + +L G Sbjct: 91 NERFKELQSRKVDILSRNSTWSMSREAGYELYFPAVAYYDGEGFMVPSSRKIETALELDG 150 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 + +CVQAGTTT L LADYF+A+NMKY + F +++E+ AAY + +CD ++ D S LYAL+ Sbjct: 151 SKVCVQAGTTTLLNLADYFRANNMKYQEVKFPKLDEVVAAYNSGQCDTFSADASQLYALR 210 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 T +P +HVILPD+ISK PLAP + Q D EW IV W+ YAM+ AEELG+T NI++ Sbjct: 211 QTLAKPGDHVILPDLISKEPLAPVVRQRDDEWMMIVKWSLYAMINAEELGVTSANIDEAL 270 Query: 266 KDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRG 325 K + PDV R +G + + GE LGL+KDW RIIRH+GNYGE++DRN+G L IPRG Sbjct: 271 K-SKKPDVMRLVGTEGA--YGEELGLSKDWAARIIRHVGNYGEVYDRNVGK---LGIPRG 324 Query: 326 YNALWSKGGLMYAPPIR 342 N LWS GG+ YAPPIR Sbjct: 325 LNQLWSAGGIQYAPPIR 341 >gi|146343600|ref|YP_001208648.1| general L-amino acid-binding periplasmic protein [Bradyrhizobium sp. ORS278] gi|146196406|emb|CAL80433.1| General L-amino acid-binding periplasmic protein [Bradyrhizobium sp. ORS278] Length = 345 Score = 411 bits (1056), Expect = e-112, Method: Composition-based stats. Identities = 160/317 (50%), Positives = 227/317 (71%), Gaps = 3/317 (0%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L +RG + CG+N GL GF+ G+W GFDVDFCRA+++AIFDDP K +++PL+A Sbjct: 32 TLKRTVRRGEVLCGVNAGLPGFSIPDDKGNWTGFDVDFCRAVAAAIFDDPKKARFVPLDA 91 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 ERF LQS+++DILSRNT W++ RE + L F + Y+DGQGF++ + + + + L+G Sbjct: 92 SERFKELQSRKVDILSRNTTWSMAREQNYDLYFPAVAYYDGQGFMVPRARKLETALDLNG 151 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 + +CVQ TT L L DYF+A+NMKY + +++++ AY + +CD +T D+S LYAL+ Sbjct: 152 SKVCVQDSTTNALNLGDYFRANNMKYEEVKLPKLDDVLKAYDSGKCDTFTADVSQLYALR 211 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 L +P +H ILPD+ISK PLAP + Q D +W IV WT YAM+ AEELG+T KNI++ Sbjct: 212 LVLTKPGDHDILPDLISKEPLAPVVRQRDDDWMMIVKWTLYAMINAEELGVTSKNIDEAL 271 Query: 266 KDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRG 325 K + PDV R +G + + G+ LGL+KDW RIIRH+GNYGE+++RN+G++S+LKIPRG Sbjct: 272 K-SKKPDVMRLVGNEGT--YGQDLGLSKDWAARIIRHVGNYGEVYERNVGSESKLKIPRG 328 Query: 326 YNALWSKGGLMYAPPIR 342 N LW+ GG+ YAPPIR Sbjct: 329 MNQLWNAGGIQYAPPIR 345 >gi|317405857|gb|EFV86140.1| extracellular solute-binding protein [Achromobacter xylosoxidans C54] Length = 340 Score = 411 bits (1056), Expect = e-112, Method: Composition-based stats. Identities = 146/343 (42%), Positives = 229/343 (66%), Gaps = 4/343 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + L + + + L +KK+G+++CG+ G+ GF+ + G+W+G D Sbjct: 1 MKRLISFAAGALALACASQAAVAGPTLDAVKKKGYVQCGLTDGVSGFSATNSKGEWEGMD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD CRA+++A+F DP+K + L+ ++RF ALQS ++D+L R T R+ SLGL+ Sbjct: 61 VDICRAVAAAVFGDPTKFKGTALSTQQRFTALQSGEVDVLLRTVTLTQTRDTSLGLSAVA 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +++DGQG +++KK G+ S +L+GA++CVQ GTTTEL LAD+F+A+N+++ P+V ++V Sbjct: 121 ASFYDGQGILVNKKLGVKSAKELNGATVCVQPGTTTELNLADWFRANNIEFKPVVIDKVT 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E+ A+ + RCDA+T D S L A++ T +P ++ ILP+ SK PL P + QGD W Sbjct: 181 EVVRAFESGRCDAFTDDASQLAAVRATQVAKPDDYEILPERFSKEPLGPMVRQGDENWLG 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +A++ AEE GITQKN++++ K + NP++ R LG+ + G+ +GL + W Y Sbjct: 241 IVRWTLFALLEAEEYGITQKNVDEMLK-SNNPNISRILGV--TPGAGKNMGLDEKWAYNA 297 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+F+RN+G S+L + RG NALWSKGG MY PIR Sbjct: 298 IKAVGNYSEVFERNVGKDSKLGLQRGTNALWSKGGAMYPWPIR 340 >gi|67922406|ref|ZP_00515917.1| extracellular solute-binding protein, family 3 [Crocosphaera watsonii WH 8501] gi|67855750|gb|EAM50998.1| extracellular solute-binding protein, family 3 [Crocosphaera watsonii WH 8501] Length = 350 Score = 411 bits (1056), Expect = e-112, Method: Composition-based stats. Identities = 144/355 (40%), Positives = 227/355 (63%), Gaps = 18/355 (5%) Query: 1 MY-KDFFVSILCLIILFFTSF-----------STNASILGDIKKRGFLKCGINTGLVGFA 48 M+ K +F+ I L+ + T+ T++S L IK+RG L CG+N + GF+ Sbjct: 1 MFNKPYFILIALLLTMPLTACGGGSQTSDNPTPTSSSRLDTIKQRGTLICGVNGEVPGFS 60 Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 V NG + G DVD CRA+++A+FDDP K++Y L+A+ERF A+QS ++D+L+RNT WT+ Sbjct: 61 FVDENGQYSGLDVDVCRAIAAALFDDPEKVEYRKLSAQERFPAVQSGEVDVLNRNTTWTI 120 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168 R+ + G+ F P ++DGQG ++ G++ + L+G SICV AGTTTE LAD + Sbjct: 121 SRDTTNGMEFAPTIFYDGQGIMVTTASGVTDIQGLAGKSICVLAGTTTEQNLADQMRKKG 180 Query: 169 -MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 Y+P+ F+ V+ + AAY+ RC+ T D S L A + ++H IL ++SK PL Sbjct: 181 ITDYNPVTFDDVDALYAAYQQGRCEGVTADRSQLVARRSILPNSNDHNILNVVLSKEPLG 240 Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGE 287 PA+ D++W++ V W ++++ AEE GI +N+ K + +P+++RFLG+D +GE Sbjct: 241 PAVKNNDSDWFDAVKWITFSLIQAEEFGINSENLATFEK-SEDPNIRRFLGLD--DKLGE 297 Query: 288 ALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GL D+ R+++H+GNYGE++DRN+G L + RG N LW++GGL+Y+PP R Sbjct: 298 GIGLPNDFASRVVKHVGNYGEVYDRNIGK--PLGLERGPNQLWTEGGLLYSPPFR 350 >gi|296387623|ref|ZP_06877098.1| putative amino acid-binding protein [Pseudomonas aeruginosa PAb1] Length = 305 Score = 411 bits (1056), Expect = e-112, Method: Composition-based stats. Identities = 150/307 (48%), Positives = 219/307 (71%), Gaps = 2/307 (0%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 ++CG++ GL GF+ A G +KG DVD CRAL++A+F D K+++ PL+A ERF ALQS Sbjct: 1 MQCGVSDGLPGFSYADAKGRFKGLDVDICRALAAALFGDAEKVRFTPLSATERFSALQSG 60 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 +D+LSRNT WT R+ +LG+ F +TYFDGQGF++++K G+SS +L ++C+Q+GTT Sbjct: 61 TVDLLSRNTSWTSSRDTALGIHFTGVTYFDGQGFLVNRKLGVSSARELKDTTVCIQSGTT 120 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215 EL +ADYF+AH ++Y ++ + E+ A A +CD + D S LYA +L +P ++V Sbjct: 121 NELNVADYFRAHGIRYKAVLDDSYEKSARALEAGQCDVLSSDQSQLYAQRLKLAKPEQYV 180 Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 +LP++ISK PL PA+ QGD W+NIV WT Y ++ AEELG+T N+ + ++D+ NPDV R Sbjct: 181 VLPEVISKEPLGPAVRQGDEAWFNIVRWTLYGLLNAEELGVTSSNVERQARDSRNPDVAR 240 Query: 276 FLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGL 335 LG + + G+ L L +DW +++R +GNYGE+F RN+G+ S LK+PRG NA W+ GGL Sbjct: 241 LLGSEG--DAGKDLQLPRDWVVQMVRQVGNYGEIFARNVGDGSPLKMPRGLNAQWNLGGL 298 Query: 336 MYAPPIR 342 YAPPIR Sbjct: 299 HYAPPIR 305 >gi|323139262|ref|ZP_08074316.1| extracellular solute-binding protein family 3 [Methylocystis sp. ATCC 49242] gi|322395483|gb|EFX98030.1| extracellular solute-binding protein family 3 [Methylocystis sp. ATCC 49242] Length = 343 Score = 411 bits (1056), Expect = e-112, Method: Composition-based stats. Identities = 156/344 (45%), Positives = 239/344 (69%), Gaps = 5/344 (1%) Query: 1 MYKDFFVSILCLIILFFT--SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M++ + L L+I F + + AS L +K+ G L CG++ G+VGF+ G+W G Sbjct: 3 MFQKRVRASLSLLIASFCLLAAPSQASTLDSVKQSGALACGVSNGIVGFSIADDKGNWSG 62 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVDFCRA++SAIF D SK++++P+ +ERF AL+S + D+LSRN+ W E+ GL F Sbjct: 63 FDVDFCRAVASAIFGDASKLRFVPVGTEERFEALKSGKFDLLSRNSTWAFSNEVDQGLIF 122 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 +T++DGQGF++ K + I+S +L+G+ +CV++ TTTE +AD+FK ++M + P+ FE Sbjct: 123 AGVTFYDGQGFLVPKSRKIASALELNGSKVCVKSATTTEANVADFFKQNHMSFEPVRFET 182 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + EI AY A +C+A + DIS L+A+KL +P++++IL D+ISK PL P + QGD +W Sbjct: 183 LAEIIKAYDAGQCNAISSDISQLHAIKLELKKPADNLILADVISKEPLGPVVRQGDDQWL 242 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298 N+V W +AM+ AEELG++ NI Q +K + P V+RF+G + +IG+ LGL+ DW Sbjct: 243 NLVKWVIFAMLNAEELGVSSSNIEQ-AKKSQKPAVRRFIGAEG--DIGKQLGLSPDWALN 299 Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I++++GNYGE+ +RN+G +S+L I RG N LWS GG+ YAPP+R Sbjct: 300 IVKNVGNYGEVLERNVGKKSKLGIARGLNQLWSMGGVQYAPPLR 343 >gi|332098837|gb|EGJ03794.1| general L-amino acid-binding periplasmic protein aapJ [Shigella boydii 3594-74] Length = 357 Score = 410 bits (1055), Expect = e-112, Method: Composition-based stats. Identities = 157/359 (43%), Positives = 235/359 (65%), Gaps = 19/359 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K ++ +L + +A + L ++K+GF++CGI+ GL+GF+ A+G + G Sbjct: 1 MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLLGFSYADADGKFSGI 60 Query: 60 DVDF----------------CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103 DVD CR++++A+F D +K++Y PL AKERF ALQS ++D+LSRN Sbjct: 61 DVDVDVDVDVDVDVDVDVDVCRSVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRN 120 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163 T WT R+ +G+AF +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADY Sbjct: 121 TTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADY 180 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 FKA+NMKY P+ F+R +E A + RCD D S LYAL++ P+E ++LP++ISK Sbjct: 181 FKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISK 240 Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSS 283 PL P + +GD EW++IV WT +AM+ AEE+GI +N+++ + + PD+ LG + Sbjct: 241 EPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKEG-- 298 Query: 284 NIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + G+ L L W Y II+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 DYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 357 >gi|288962140|ref|YP_003452435.1| general L-amino acid transport system substrate-binding protein [Azospirillum sp. B510] gi|288914406|dbj|BAI75891.1| general L-amino acid transport system substrate-binding protein [Azospirillum sp. B510] Length = 353 Score = 410 bits (1055), Expect = e-112, Method: Composition-based stats. Identities = 155/340 (45%), Positives = 235/340 (69%), Gaps = 5/340 (1%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 VS L + + + +K++G+++CG+N GL GF+ G W G DVD Sbjct: 18 TLSVSAFALSG-ALSGTAEAGATFDGVKQKGYVQCGVNLGLYGFSAPDDKGKWSGLDVDM 76 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 CRA+++A+F D K++Y PL+A++R ALQS +IDIL+RNT TL R+ + GL F P Y Sbjct: 77 CRAVAAAVFGDAEKVKYTPLSAQQRLPALQSGEIDILARNTTRTLTRDTANGLNFAPTNY 136 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 +DGQGF++ K G+ S QL+GA++CV GTTTE ++DYF+A+ M + P+V E+ EE++ Sbjct: 137 YDGQGFMVSAKLGLKSAKQLNGATVCVLPGTTTEQNVSDYFRANKMTFKPVVIEKNEELN 196 Query: 184 AAYRAHRCDAYTGDISALYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A+ A RCDA T D S L A++ P+++VILP++ISK PL+PAI QGD EW N+V+ Sbjct: 197 KAFFAGRCDALTSDASQLAAIRAAEVPNPADYVILPELISKEPLSPAIRQGDEEWTNLVT 256 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302 W YAMV AEE G+T + ++ + + +PDV+R LG+ ++ G+ALG+ ++W + II+ Sbjct: 257 WAFYAMVQAEEKGLTSETVD-AALTSPDPDVKRLLGV--TAGNGKALGVEENWAFNIIKQ 313 Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNY + ++RN+G S+LK+PRG NAL+++GGLMYAPP++ Sbjct: 314 VGNYAQSYERNVGAGSKLKMPRGQNALYTEGGLMYAPPMK 353 >gi|39937855|ref|NP_950131.1| ABC transporter amino acid binding protein [Rhodopseudomonas palustris CGA009] gi|39651715|emb|CAE30237.1| ABC transporter, amino acid binding protein [Rhodopseudomonas palustris CGA009] Length = 344 Score = 410 bits (1055), Expect = e-112, Method: Composition-based stats. Identities = 169/350 (48%), Positives = 237/350 (67%), Gaps = 14/350 (4%) Query: 1 MYKDFFVSILCLIILFFTSFST--------NASILGDIKKRGFLKCGINTGLVGFAEVKA 52 M+K F + L + ++ + + L +R + CG+N GL GF+ Sbjct: 1 MFKRTFRTGLAIGLVVAAGIAAAAITYERYDTKTLKRTIRRDAVLCGVNKGLPGFSTPDD 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G+W GFDVDFCRA+++AIFDDP+K+Q++PL+A ERF LQS+++DILSRN+ W++ RE Sbjct: 61 KGNWTGFDVDFCRAVAAAIFDDPTKVQFVPLDANERFKELQSRKVDILSRNSTWSMSRET 120 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + L F + Y+DGQGF++ + I S +L G+ +CVQ GTTT+L LADYF+A+NMKY Sbjct: 121 NYDLYFPAVAYYDGQGFMVPASRKIDSAVELDGSKVCVQNGTTTQLNLADYFRANNMKYQ 180 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + E+ +++ AY+ +CD +T D+S LYAL+ T ++ +H+ILPD+ISK PLAP + Q Sbjct: 181 EVKSEKFDDVVKAYKDGQCDTFTADVSQLYALRKTFEKSGDHIILPDVISKEPLAPVVRQ 240 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLT 292 D +W IV WT YAM+ AEELGIT +NI + K + PDV R +G + + GE LGL+ Sbjct: 241 RDDDWMMIVKWTLYAMINAEELGITSQNIGEALK-SKKPDVMRLVGTEGA--FGEDLGLS 297 Query: 293 KDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 KDW RIIRH+GNYGE++DRN+G L IPRG N LWS GG+ YAPPIR Sbjct: 298 KDWAARIIRHVGNYGEVYDRNVGK---LGIPRGLNQLWSNGGIQYAPPIR 344 >gi|317405707|gb|EFV86003.1| L-amino acid ABC transporter [Achromobacter xylosoxidans C54] Length = 338 Score = 410 bits (1055), Expect = e-112, Method: Composition-based stats. Identities = 145/340 (42%), Positives = 224/340 (65%), Gaps = 4/340 (1%) Query: 4 DFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 ++ L +S+ +A +K +GF++CG++TG+ GF+ + G W G DVD Sbjct: 2 KALTTVAAGAALLLSSWGASAGVTFESVKNKGFVQCGVSTGVAGFSVNDSKGGWMGLDVD 61 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 CRAL+ +F D SK + + ++A +RF ALQS ++D+L RNT +L R+ +LGL + Sbjct: 62 LCRALAVTMFGDASKAKIMAVSAVQRFTALQSGEVDVLPRNTTLSLTRDTTLGLIGVGVN 121 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y+D QG +++K + S +L GA++CVQ GTTTEL L+D+F++ N+ + P+V ER++EI Sbjct: 122 YYDSQGIMVNKSLNVKSAKELDGATVCVQPGTTTELNLSDWFRSQNIAFKPVVVERLDEI 181 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A+ RCDA+TGD S L A + + P ++ ILP+ SK PL P + QGD +W+N+V Sbjct: 182 IRAFAVGRCDAFTGDKSQLAAARTNLENPEKYDILPENFSKEPLGPMVRQGDEQWFNVVR 241 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302 WT +AM+ AEE G+T KN++++ K +TNP+VQR LG+ + +G+ LG+ W Y +I+ Sbjct: 242 WTMFAMLEAEEYGVTSKNVDEMLK-STNPNVQRLLGV--TPGMGKNLGVDDKWAYNVIKQ 298 Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGE F++NLG S +K+ RG NA + GGLMY P+R Sbjct: 299 IGNYGESFEKNLGATSPMKLSRGLNASYRNGGLMYGWPVR 338 >gi|126724899|ref|ZP_01740742.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Rhodobacterales bacterium HTCC2150] gi|126706063|gb|EBA05153.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Rhodobacterales bacterium HTCC2150] Length = 338 Score = 410 bits (1055), Expect = e-112, Method: Composition-based stats. Identities = 155/342 (45%), Positives = 218/342 (63%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K S L I ++ + A L D+K RG L CG+ TGLVGFA A+G W+GFD Sbjct: 1 MKKSVIFS--ALTIAGLSASAAAAGTLDDVKARGKLNCGVTTGLVGFAAPNADGRWEGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA++ A D + ++++P K RF AL S +ID+L+RNT WTL R+ L F Sbjct: 59 VAVCRAVAVATLGDENAVEFVPTTGKTRFTALASGEIDMLARNTTWTLSRDADLKFTFVG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF+ K G++S L GA++C+Q GTTTEL LAD+F+++N+ Y P+ E Sbjct: 119 VNYYDGQGFMAPKDLGVASAKDLDGATVCIQTGTTTELNLADFFRSNNISYEPVPIETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD +T D S L A + T + P++HV+LP+I+SK PL P + GD+EW +I Sbjct: 179 EAQQQYLAGACDVFTTDASGLAATRATFENPADHVLLPEIVSKEPLGPLVRHGDSEWGDI 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V W+ AM+TAEELGIT N ++S T NP++ R LG + + +GE LGL+ DW II Sbjct: 239 VRWSLNAMITAEELGITSANAAEMSAGTNNPEINRLLGSEGT--LGEMLGLSADWAKNII 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F+ N+G + + + RG N+ W+ GGL+Y+PP R Sbjct: 297 MTQGNYGEVFENNIGENTAIGLSRGLNSQWTDGGLIYSPPFR 338 >gi|82778575|ref|YP_404924.1| putative periplasmic binding transport protein [Shigella dysenteriae Sd197] gi|81242723|gb|ABB63433.1| putative periplasmic binding transport protein [Shigella dysenteriae Sd197] Length = 305 Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats. Identities = 148/307 (48%), Positives = 215/307 (70%), Gaps = 2/307 (0%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 ++CGI+ GL F+ A+G + G DVD CR +++A+F D +K++Y PL AKERF ALQS Sbjct: 1 MQCGISDGLPRFSYADADGKFSGIDVDVCRGVAAAVFGDNTKVKYTPLTAKERFTALQSG 60 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 ++D+LSRNT WT R+ +G+AF +TY+DG GF+ H K G+ S +L GA++C+QAGT Sbjct: 61 EVDLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTD 120 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215 TEL +ADYFKA+NMKY P+ F+R +E A + RCD D S LYAL++ P+E + Sbjct: 121 TELNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPAEWI 180 Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 +LP++ISK PL P + +GD EW++IV WT +AM+ AEE+GI +N+++ + + PD+ Sbjct: 181 VLPEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAH 240 Query: 276 FLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGL 335 LG + + G+ L L W Y II+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ Sbjct: 241 LLGKEG--DYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGI 298 Query: 336 MYAPPIR 342 YAPP+R Sbjct: 299 QYAPPVR 305 >gi|163739481|ref|ZP_02146891.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Phaeobacter gallaeciensis BS107] gi|161387234|gb|EDQ11593.1| glutamate/glutamine/aspartate/asparagine-binding protein BztA precursor [Phaeobacter gallaeciensis BS107] Length = 338 Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats. Identities = 156/342 (45%), Positives = 220/342 (64%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + L I + + A L D+K RG L CG+ TGLVGFA ANG+W+GFD Sbjct: 1 MKNKVILG--ALTIAGLAAGAAAAGTLDDVKARGKLNCGVTTGLVGFAAPNANGEWEGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ D + ++++P K RF AL S +ID+L+RNT WT R++ L F Sbjct: 59 VAVCRAVAAAVLGDSTAVEFVPTTGKTRFTALASGEIDMLARNTTWTFSRDVDLKFEFVG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K+ G+SS +L GA++C+Q GTTTEL LAD+F+++N+ Y P+ E Sbjct: 119 VNYYDGQGFMVPKELGVSSAKELDGATVCIQTGTTTELNLADFFRSNNISYEPVPIETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT D S L A + T D PS HV+LP+IISK PL P + GD EW ++ Sbjct: 179 EAQQQYLAGACDVYTTDASGLAATRATFDDPSAHVLLPEIISKEPLGPLVRHGDHEWGDV 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V W+ A+V AEELG+T NI +++ T NP++ R LG + + +GE LGL+ DW I Sbjct: 239 VRWSLNALVAAEELGVTSANIGEMAAGTENPEINRLLGTEGT--LGEMLGLSADWAKNAI 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F +N+G + + + RG NA W++GGL+YAPP R Sbjct: 297 GAGGNYGEVFAKNIGEDTPIGLARGLNAQWTEGGLLYAPPFR 338 >gi|154253424|ref|YP_001414248.1| extracellular solute-binding protein [Parvibaculum lavamentivorans DS-1] gi|154157374|gb|ABS64591.1| extracellular solute-binding protein family 3 [Parvibaculum lavamentivorans DS-1] Length = 367 Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats. Identities = 156/321 (48%), Positives = 216/321 (67%), Gaps = 3/321 (0%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 L +++RGF++CG++ GL GF+ G W G DVDFCRA+++AIF +P ++++ Sbjct: 50 AAGDTLRRVRQRGFIQCGVSQGLPGFSNPDERGRWSGIDVDFCRAIAAAIFGNPDQVRFR 109 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 PL+AK+RF ALQS +IDILSRNT WT+ R+ LG F +TY+DGQ F++ K GI + + Sbjct: 110 PLSAKDRFTALQSGEIDILSRNTTWTMSRDTQLGFNFVGVTYYDGQSFMVRKAAGIKTTA 169 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L+GA+IC + GTTTEL LADYF++ + Y + FE+ +E AY RCDAYT D S L Sbjct: 170 DLAGATICTETGTTTELNLADYFRSRGLSYRVLSFEKNDEAIVAYDRGRCDAYTTDASGL 229 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 YA +L P + IL +IISK PL PA+ QGD +W +I WT A++ AEE GIT NI Sbjct: 230 YATRLKLADPDANTILSEIISKEPLGPAVRQGDPQWEDIARWTLNALLEAEEFGITSANI 289 Query: 262 NQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELK 321 N++ + + NP V+R LG + + G ++GL +W IR +GNYGEMF+RN+G + L Sbjct: 290 NEMLE-SDNPRVKRLLGREGA--YGGSVGLDANWAANAIRAVGNYGEMFERNVGKNTPLG 346 Query: 322 IPRGYNALWSKGGLMYAPPIR 342 I RG NA W+ GGL YAPP+R Sbjct: 347 IERGLNAQWTDGGLQYAPPVR 367 >gi|163740274|ref|ZP_02147668.1| predicted amino-acid transporter subunit [Phaeobacter gallaeciensis 2.10] gi|161386132|gb|EDQ10507.1| predicted amino-acid transporter subunit [Phaeobacter gallaeciensis 2.10] Length = 338 Score = 410 bits (1053), Expect = e-112, Method: Composition-based stats. Identities = 155/342 (45%), Positives = 220/342 (64%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + L + + + A L D+K RG L CG+ TGLVGFA ANG+W+GFD Sbjct: 1 MKNKVILG--ALTVAGLAAGAAAAGTLDDVKARGKLNCGVTTGLVGFAAPNANGEWEGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ D + ++++P K RF AL S +ID+L+RNT WT R++ L F Sbjct: 59 VAVCRAVAAAVLGDSTAVEFVPTTGKTRFTALASGEIDMLARNTTWTFSRDVDLKFEFVG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K+ G+SS +L GA++C+Q GTTTEL LAD+F+++N+ Y P+ E Sbjct: 119 VNYYDGQGFMVPKELGVSSAKELDGATVCIQTGTTTELNLADFFRSNNISYEPVPIETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT D S L A + T D PS HV+LP+IISK PL P + GD EW ++ Sbjct: 179 EAQQQYLAGACDVYTTDASGLAATRATFDDPSAHVLLPEIISKEPLGPLVRHGDHEWGDV 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V W+ A+V AEELG+T NI +++ T NP++ R LG + + +GE LGL+ DW I Sbjct: 239 VRWSLNALVAAEELGVTSANIGEMAAGTENPEINRLLGTEGT--LGEMLGLSADWAKNAI 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F +N+G + + + RG NA W++GGL+YAPP R Sbjct: 297 GAGGNYGEVFAKNIGEDTPIGLARGLNAQWTEGGLLYAPPFR 338 >gi|304391889|ref|ZP_07373831.1| general L-amino acid-binding periplasmic protein AapJ [Ahrensia sp. R2A130] gi|303296118|gb|EFL90476.1| general L-amino acid-binding periplasmic protein AapJ [Ahrensia sp. R2A130] Length = 342 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 156/343 (45%), Positives = 216/343 (62%), Gaps = 2/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M L + T +A+ L D+K +GFL+CG++TG GFA G+W+GFD Sbjct: 1 MKTKLLSLALGAAAIAMTGTVASAATLDDVKAKGFLQCGVSTGFPGFAFTDDAGNWQGFD 60 Query: 61 VDFCRALSSAIF-DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 CRA+++AIF D + +++ P K RF AL S ++D+L+RNT T R++ L F Sbjct: 61 PALCRAMAAAIFAGDSNAVKFTPTTGKTRFTALASGEVDVLARNTTETFSRDVDLKFTFG 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 P+ Y+DGQGF++ K G++S LSGA+ICVQ GTTTEL LADYF+A+NM Y P+ E Sbjct: 121 PVNYYDGQGFMVRKSLGVTSALNLSGATICVQTGTTTELNLADYFRANNMTYEPVPIETN 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E Y A+ CDAYT D S L A + + P++H+ILP+IISK PL P + QGD +W + Sbjct: 181 AEAQEKYLANACDAYTTDASGLSATRSAFEAPNDHMILPEIISKEPLGPLVRQGDDQWAD 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 I+ WT A++TAEE G+T N +++ +T+PD+QR LG G LGL DW Sbjct: 241 ILKWTLLALITAEEKGVTAANADEMKASSTDPDIQRLLGA-TEDGFGAMLGLDNDWALNA 299 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ GNYGE+F + LG + + I RG NAL++ GGLMYA PIR Sbjct: 300 IKAGGNYGEIFAKYLGTDTAVGIERGLNALYTDGGLMYAAPIR 342 >gi|91978841|ref|YP_571500.1| extracellular solute-binding protein [Rhodopseudomonas palustris BisB5] gi|91685297|gb|ABE41599.1| extracellular solute-binding protein, family 3 [Rhodopseudomonas palustris BisB5] Length = 341 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 162/317 (51%), Positives = 223/317 (70%), Gaps = 6/317 (1%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L +R + CG+N GL GF+ G+W GFDVDFCRA+++AIF+DP+K++++PL+A Sbjct: 31 TLKRTIRRDAVLCGVNKGLPGFSTPDDKGNWSGFDVDFCRAVAAAIFNDPNKVKFVPLDA 90 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 ERF LQS+++DILSRN+ W++ RE L F + Y+DGQGF+ + + + +L G Sbjct: 91 NERFKELQSRKVDILSRNSTWSMSRETGYELYFPAVAYYDGQGFMAPAARKVETALELDG 150 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 + +CVQ GTTT L LAD+F+ +NMKY + F +++E+ +AY+ +CD +T D S LYAL+ Sbjct: 151 SKVCVQEGTTTLLNLADFFRTNNMKYQEVKFGKLDEVVSAYKNGQCDTFTADASQLYALR 210 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 T D+P +HVILPD+ISK PLAP + Q D +W IV WT YAM+ AEELGIT NI++ Sbjct: 211 QTLDKPGDHVILPDLISKEPLAPVVRQRDDDWMMIVKWTLYAMINAEELGITSINIDEAL 270 Query: 266 KDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRG 325 K + PDV R +G + + GE LGL KDW RIIRH+GNYGE++DRN+G L IPRG Sbjct: 271 K-SKKPDVMRLVGTEGT--YGEELGLPKDWAARIIRHVGNYGEIYDRNVGK---LGIPRG 324 Query: 326 YNALWSKGGLMYAPPIR 342 N LW+ GG+ YAPPIR Sbjct: 325 LNQLWNAGGIQYAPPIR 341 >gi|218437710|ref|YP_002376039.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7424] gi|218170438|gb|ACK69171.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7424] Length = 362 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 143/326 (43%), Positives = 213/326 (65%), Gaps = 6/326 (1%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 TS S S L +K RG + CGIN + GF+ V G + G DVD CRA+++A+FDDP+K Sbjct: 42 TSTSGGTSRLDTVKARGTVICGINGEVPGFSFVDEQGQYSGLDVDMCRAVAAALFDDPTK 101 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 +++ L A +RF A+QS ++DIL+RNT WT+ R+ S+G+ F P T++DGQG ++ K GI Sbjct: 102 VEFRKLTADQRFTAVQSGEVDILNRNTTWTISRDTSVGMDFAPTTFYDGQGIMVTKASGI 161 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHN-MKYHPIVFERVEEIDAAYRAHRCDAYTG 196 + + L G S+CV +GTTTE LAD + Y PI + V+++ AAY+ RC+ T Sbjct: 162 TKLEDLKGKSVCVLSGTTTEQNLADQMRKRGIEDYTPIASDDVDQLYAAYQEGRCEGVTS 221 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 D S L A + +P +HV+L ++SK PL P + GD++W + + W YA + AEELGI Sbjct: 222 DRSQLVARRSVLPKPEDHVVLDVVLSKEPLGPVVADGDSQWSDTIKWITYATIEAEELGI 281 Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316 +NI + K + +P+V+RFLG + + +GE +GL D+ R+I+H+GNY E++DRN+G Sbjct: 282 NSQNIGEFEK-SEDPNVKRFLGSEGT--LGEDMGLNNDFATRVIKHVGNYEEIYDRNIGK 338 Query: 317 QSELKIPRGYNALWSKGGLMYAPPIR 342 L + RG N LW+ GGL+Y+PP R Sbjct: 339 --PLGLERGPNQLWTNGGLLYSPPFR 362 >gi|74313796|ref|YP_312215.1| putative periplasmic binding transport protein [Shigella sonnei Ss046] gi|73857273|gb|AAZ89980.1| putative periplasmic binding transport protein [Shigella sonnei Ss046] Length = 305 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 148/307 (48%), Positives = 215/307 (70%), Gaps = 2/307 (0%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 ++CGI+ GL GF+ A+G + G DVD CR +++A+F D +K++Y PL AKERF ALQS Sbjct: 1 MQCGISDGLPGFSYADADGKFSGIDVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSG 60 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 ++D+LSRNT WT R+ +G+AF +T +DG GF+ H K G+ S +L GA++C+QAGT Sbjct: 61 EVDLLSRNTTWTSSRDAGMGMAFTGVTDYDGIGFLTHDKAGLKSAKELDGATVCIQAGTD 120 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215 TEL +ADYFKA+NMKY P+ F+R +E A + RCD D S LYAL++ P+E + Sbjct: 121 TELNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPAEWI 180 Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 +LP++ISK PL P + +GD EW++IV WT +AM+ AEE+GI +N+++ + + PD+ Sbjct: 181 VLPEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAH 240 Query: 276 FLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGL 335 LG + + G+ L L W Y II+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ Sbjct: 241 LLGKEG--DYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGI 298 Query: 336 MYAPPIR 342 YAPP+R Sbjct: 299 QYAPPVR 305 >gi|293607066|ref|ZP_06689409.1| general amino acid ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] gi|292814556|gb|EFF73694.1| general amino acid ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] Length = 340 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 147/343 (42%), Positives = 227/343 (66%), Gaps = 4/343 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + L + + + L +KK+GF++CG+ G+ GF+ + G+W+G D Sbjct: 1 MKRSTLFAAGALALACASQAAIAGPTLDAVKKKGFVQCGLTDGVSGFSATNSKGEWEGMD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD CRA+++A+F DPSK + L+ ++RF ALQS ++D+L R T R+ SLGL+ Sbjct: 61 VDICRAVAAAVFGDPSKFKGTALSTQQRFTALQSGEVDVLLRTVTLTQTRDTSLGLSAVA 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +++DGQG +++KK G+ S +L+GA++CVQ GTTTEL LAD+F+A+ +++ P+V ++V Sbjct: 121 ASFYDGQGILVNKKLGVKSAKELNGATVCVQPGTTTELNLADWFRANKIEFKPVVIDKVT 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E+ A+ + RCDA+T D S L A++ T +P ++ ILP+ SK PL P + QGD W Sbjct: 181 EVVRAFESGRCDAFTDDSSQLAAVRATQVAKPDDYEILPERFSKEPLGPMVRQGDENWLG 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +A++ AEE GITQKN++++ K + NP+V R LG+ + G+ +GL + W Y Sbjct: 241 IVRWTLFALLEAEEYGITQKNVDEMLK-SNNPNVLRILGV--TPGAGKNMGLDEKWAYNA 297 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+F+RN+G S+L + RG NALWS GG MY PIR Sbjct: 298 IKAVGNYSEVFERNVGKDSKLGLARGTNALWSNGGAMYPWPIR 340 >gi|192293640|ref|YP_001994245.1| extracellular solute-binding protein family 3 [Rhodopseudomonas palustris TIE-1] gi|192287389|gb|ACF03770.1| extracellular solute-binding protein family 3 [Rhodopseudomonas palustris TIE-1] Length = 344 Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats. Identities = 167/350 (47%), Positives = 236/350 (67%), Gaps = 14/350 (4%) Query: 1 MYKDFFVSILCLIILFFTSFST--------NASILGDIKKRGFLKCGINTGLVGFAEVKA 52 M+K F + L + ++ + + L +R + CG+N GL GF+ Sbjct: 1 MFKRTFRTGLAIGLVVAAGIAAAAITYERYDTKTLKRTIRRDAVLCGVNKGLPGFSTPDD 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G+W GFDVDFCRA+++AIFDDP+K+Q++PL+A ERF LQS+++DILSRN+ W++ RE Sbjct: 61 KGNWTGFDVDFCRAVAAAIFDDPTKVQFVPLDANERFKELQSRKVDILSRNSTWSMSRET 120 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + L F + Y+DGQGF++ + I S +L G+ +CVQ GTTT+L LADYF+ +NMKY Sbjct: 121 NYDLYFPAVAYYDGQGFMVPASRKIDSAVELDGSKVCVQNGTTTQLNLADYFRTNNMKYQ 180 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + E+ +++ AY+ +CD +T D+S LYAL+ T ++ +H+ILPD+ISK PLAP + Q Sbjct: 181 EVKSEKFDDVVKAYKDGQCDTFTADVSQLYALRKTFEKSGDHIILPDVISKEPLAPVVRQ 240 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLT 292 D +W IV WT YAM+ AEELGIT +NI + K + PDV R +G + + GE LGL+ Sbjct: 241 RDDDWMMIVKWTLYAMINAEELGITSQNIGEALK-SKKPDVMRLVGTEGA--FGEDLGLS 297 Query: 293 KDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 KDW R+IRH+GNYGE++DRN+G L IPRG N LWS GG+ YAPPIR Sbjct: 298 KDWAARVIRHVGNYGEVYDRNVGK---LGIPRGLNQLWSNGGIQYAPPIR 344 >gi|307152419|ref|YP_003887803.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7822] gi|306982647|gb|ADN14528.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7822] Length = 356 Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats. Identities = 145/355 (40%), Positives = 220/355 (61%), Gaps = 26/355 (7%) Query: 9 ILCLIILFFTSFSTNA--------------------SILGDIKKRGFLKCGINTGLVGFA 48 +L +IL TS + S L IK RG L CG+N + GF+ Sbjct: 7 LLVAVILLVTSLTACGEGTNNAGNSNTQASPANGETSRLDTIKARGTLICGVNGEVPGFS 66 Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 V G ++G DVD CRA+++A+FDDP+K+++ L A++RF A+QS ++DIL+RNT WTL Sbjct: 67 FVDEKGQFEGLDVDMCRAVAAALFDDPNKVEFRKLTAEQRFTAVQSGEVDILNRNTTWTL 126 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168 R+ S G+ F P T++DGQG ++ K GI+ + L G SICV +GTTTE LAD + Sbjct: 127 SRDTSTGMEFGPTTFYDGQGMMVTKASGITKLEDLKGKSICVLSGTTTEQNLADQMRKRG 186 Query: 169 -MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 Y P+ + V+++ AAY+ RC+ T D S L A + +P +H++L ++SK PL Sbjct: 187 VTAYTPVASDDVDQLYAAYQEGRCEGITSDRSQLVARRSVLPKPQDHIVLDVVMSKEPLG 246 Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGE 287 + GD++W++ V W YA++ EELGI KNI K + +P+V+RFLG++ + +G+ Sbjct: 247 TLVADGDSKWFDTVKWITYAVIEGEELGINSKNIANFDK-SQDPNVRRFLGLEGT--LGQ 303 Query: 288 ALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GL D+ R+I+H+GNYGE+++RN+G L + RG N LW+ GGL+Y+PP R Sbjct: 304 DMGLPNDFAARVIKHVGNYGEIYERNIGK--PLGLERGPNRLWTNGGLLYSPPFR 356 >gi|227327916|ref|ZP_03831940.1| general L-amino ABC transporter binding protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 305 Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats. Identities = 153/307 (49%), Positives = 218/307 (71%), Gaps = 2/307 (0%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 ++CGI+ GL GF+ A+G + G DVD CR L++A+F D +K++Y PL AKERF ALQS Sbjct: 1 MQCGISDGLPGFSYADASGKYSGIDVDVCRGLAAAVFGDANKVKYTPLTAKERFTALQSG 60 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 ++D+LSRNT WT R+ +G+ F +TY+DG GF+ H K G++S +L GA++C+QAGT Sbjct: 61 EVDVLSRNTTWTSSRDGGMGMLFTGVTYYDGIGFLTHNKAGLTSAKELDGATVCIQAGTD 120 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215 TEL +ADYFK H M+Y P+ F+R +E A + RCD D S LYAL++ +P+E + Sbjct: 121 TELNVADYFKTHKMQYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSKPAEFI 180 Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 +LP++ISK PL P + +GD EW+ IV WT +AM+ AEE+G+T KN++Q++ T PD+ Sbjct: 181 VLPEVISKEPLGPVVRRGDEEWFAIVRWTLFAMLNAEEMGVTSKNVDQLAAKPTTPDMSH 240 Query: 276 FLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGL 335 LG + S G+ L L DW ++II+ +GNYGE+F+RN+G SELKI RG N LW+KGG+ Sbjct: 241 LLGHEGS--YGKDLKLPNDWAFKIIKQVGNYGEIFERNVGMGSELKIKRGLNELWNKGGI 298 Query: 336 MYAPPIR 342 YAP +R Sbjct: 299 QYAPAVR 305 >gi|17231656|ref|NP_488204.1| periplasmic amino acid-binding protein of amino acid ABC transporter [Nostoc sp. PCC 7120] gi|17133299|dbj|BAB75863.1| periplasmic amino acid-binding protein of amino acid ABC transporter [Nostoc sp. PCC 7120] Length = 369 Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats. Identities = 158/359 (44%), Positives = 230/359 (64%), Gaps = 20/359 (5%) Query: 1 MYKDFFVSILCLIILFFTSF------------STNASIL-----GDIKKRGFLKCGINTG 43 M+ + IL ++F T+ + + S L IK RG L CG++ Sbjct: 14 MFMNKLAVILGASLIFTTTACGGDSAPTTDTSTNSGSTLVANRWNTIKNRGQLICGVSGE 73 Query: 44 LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103 + GF+ V +G++ G DVD CRA+++A+FD+P +++ L+AKERF ALQ+ ++DILSRN Sbjct: 74 VPGFSFVGTDGEYSGIDVDVCRAIAAALFDNPDAVEFRNLSAKERFTALQTGEVDILSRN 133 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163 T WTL R S+GL F P+ ++DGQ ++ K I S++ L +ICVQ GTTTE LAD Sbjct: 134 TTWTLSRATSVGLEFAPVVFYDGQAIMVRKNSAIKSLADLKDKAICVQTGTTTEQNLADQ 193 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 + N+ Y P+VFE V A Y RCDA T D SAL + + T P ++V+L ++IS Sbjct: 194 MRKRNITYKPVVFEDVNVTFATYAEGRCDAITADRSALVSRRTTLPTPEDNVVLDEVISS 253 Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSS 283 PLAPA+ +GD +W N V+W YA++ EELGI +N+ Q + + +PDV+RFLG + Sbjct: 254 EPLAPAVARGDAKWSNTVNWVVYALIKGEELGINAQNLGQFT-TSNDPDVKRFLGTEG-- 310 Query: 284 NIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++G+ LGLT D+ RII+H+GNY E++DRNLG +++L + RG N LWSKGGL+Y+PP R Sbjct: 311 DLGQGLGLTNDFAARIIKHVGNYAEVYDRNLGPKTKLNLARGQNQLWSKGGLLYSPPFR 369 >gi|310816976|ref|YP_003964940.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Ketogulonicigenium vulgare Y25] gi|308755711|gb|ADO43640.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Ketogulonicigenium vulgare Y25] Length = 338 Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats. Identities = 155/342 (45%), Positives = 212/342 (61%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L + A+ L D+K R L CG NTGL GFA A+G W+GFD Sbjct: 1 MKKSLV--FCAMGALAMGTGLAQAATLDDVKARDVLNCGTNTGLAGFAAPNADGVWEGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ DP+K+ ++P RF AL S +ID+LSR T WT R++ L F Sbjct: 59 VAVCRAVAAAVLGDPTKVNFVPTTGATRFTALASGEIDMLSRVTTWTFQRDVELAFDFVG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGFI+ G++S +L GA++C+Q GTTTEL LAD+F+A+ + Y P+ E Sbjct: 119 VNYYDGQGFIVPTSLGVTSAHELDGATVCIQTGTTTELNLADFFRANGISYEPVPIETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CDAYT D S L A + T + P +H+ILP+IISK PL P + GD +W +I Sbjct: 179 EGQQQYLAGACDAYTTDASGLAATRATFEAPGDHIILPEIISKEPLGPVVRHGDNQWGDI 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V W+ +A+V AEE GIT NI ++S T NP++ R LG + N+GE LGL +W R I Sbjct: 239 VRWSFFALVAAEEYGITSANIEELSAGTDNPEINRILGTEG--NLGEQLGLDAEWAKRAI 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F + LG + + + RG NALW++GGL YA P R Sbjct: 297 AAEGNYGEIFAKYLGTDTPIGLDRGLNALWTQGGLQYAMPFR 338 >gi|86135803|ref|ZP_01054382.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Roseobacter sp. MED193] gi|85826677|gb|EAQ46873.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Roseobacter sp. MED193] Length = 346 Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats. Identities = 152/342 (44%), Positives = 219/342 (64%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + L I ++ + A L D+K RG L CG+ TGLVGFA A+G+W+GFD Sbjct: 9 MKNTVILG--ALTIAGLSAGAAAAGTLDDVKARGKLNCGVTTGLVGFAAPNASGEWEGFD 66 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ D + ++++P K RF AL S +ID+L+RNT WT R++ L F Sbjct: 67 VAVCRAVAAAVLGDSNAVEFVPTTGKTRFTALASGEIDMLARNTTWTFSRDVDLKFEFTG 126 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K+ G+SS +L GA++C+Q GTTTEL LAD+F+++N+ Y P+ E Sbjct: 127 VNYYDGQGFMVPKELGVSSAKELDGATVCIQTGTTTELNLADFFRSNNISYEPVPIETNA 186 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT D S L A + T + P H +LP+IISK PL P + GD EW ++ Sbjct: 187 EAQQQYLAGACDVYTTDASGLAATRATFEAPDAHTLLPEIISKEPLGPLVRHGDHEWGDV 246 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT A+++AEELG+T NI +++ T NP++ R LG + + +GE LGL+ DW I Sbjct: 247 VRWTLNALISAEELGVTSANIGEMAAGTNNPEINRLLGTEGT--LGEMLGLSADWGKNAI 304 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F N+G + + + RG NA W+KGGL+Y+PP R Sbjct: 305 AAGGNYGEVFADNIGEATPIGLARGLNAQWTKGGLLYSPPFR 346 >gi|224371700|ref|YP_002605864.1| amino acid-binding periplasmic amino acid binding protein [Desulfobacterium autotrophicum HRM2] gi|223694417|gb|ACN17700.1| amino acid-binding periplasmic amino acid binding protein [Desulfobacterium autotrophicum HRM2] Length = 332 Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats. Identities = 146/334 (43%), Positives = 221/334 (66%), Gaps = 2/334 (0%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 ++ +++ F A L D++ + L CGI+ G+ GF+ + G W GFDVD RA++ Sbjct: 1 MIFIMMGAFPCTGPWAGTLEDVRAKDVLTCGISEGIPGFSIPDSTGKWVGFDVDMARAVA 60 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 +A+ DP KI+++PL +K++ +A+ S Q+D+ SR T WTL R+ G+ F I ++DGQG Sbjct: 61 AAVLSDPQKIKFVPLASKQKIIAVSSGQVDLTSRTTTWTLKRDGKQGVDFTKIVFYDGQG 120 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 F++ K G+ S +++ GA++CV AGTT+EL LAD+ +A+ +K +VF+ +E AY Sbjct: 121 FMVKKALGVDSATKIDGATVCVTAGTTSELNLADFARANGLKIEALVFDGKKEALNAYAT 180 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 RCD +T D+S L +L+ T P++H I+P++ISK PLAP + GD +W +IV+W + Sbjct: 181 GRCDCFTTDVSQLASLRTTLPNPNDHEIMPEVISKEPLAPLVRHGDNQWKDIVTWVLNGL 240 Query: 249 VTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGE 308 V AEE GIT N+ ++ + + NP VQR LG KS + G +GL KDW R+I+ +GNYGE Sbjct: 241 VAAEEYGITSANVLEMKEKSENPVVQRMLG--KSGDTGSYIGLDKDWMVRVIQAVGNYGE 298 Query: 309 MFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++DR+ G + L IPRG N LW+KGGL YA PIR Sbjct: 299 IYDRHFGPATALNIPRGVNRLWTKGGLQYALPIR 332 >gi|30064596|ref|NP_838767.1| putative periplasmic binding transport protein [Shigella flexneri 2a str. 2457T] gi|56480353|ref|NP_709270.2| putative periplasmic binding transport protein [Shigella flexneri 2a str. 301] gi|30042855|gb|AAP18578.1| putative periplasmic binding transport protein [Shigella flexneri 2a str. 2457T] gi|56383904|gb|AAN44977.2| putative periplasmic binding transport protein [Shigella flexneri 2a str. 301] gi|313648492|gb|EFS12934.1| general L-amino acid-binding periplasmic protein aapJ [Shigella flexneri 2a str. 2457T] Length = 305 Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats. Identities = 147/307 (47%), Positives = 214/307 (69%), Gaps = 2/307 (0%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 ++CGI+ GL F+ A+G + G DVD CR +++A+F D +K++Y PL AKERF ALQS Sbjct: 1 MQCGISDGLPRFSYADADGKFSGIDVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSG 60 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 ++D+LSRNT WT R+ +G+AF +TY+DG GF+ H K G+ S +L GA++C+QAGT Sbjct: 61 EVDLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTD 120 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215 TEL +ADYFKA+NMKY P+ F+R +E A + RCD D S LYAL++ P+E + Sbjct: 121 TELNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPAEWI 180 Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 +LP++ISK PL P + +GD EW++IV WT +AM+ AEE+GI +N+++ + + PD+ Sbjct: 181 VLPEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAH 240 Query: 276 FLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGL 335 LG + + G+ L L W Y II+ + NY E+F+RN+G++S LKI RG N LW+ GG+ Sbjct: 241 LLGKEG--DYGKDLKLDNKWAYNIIKQVSNYSEIFERNVGSESPLKIKRGQNNLWNNGGI 298 Query: 336 MYAPPIR 342 YAPP+R Sbjct: 299 QYAPPVR 305 >gi|260577146|ref|ZP_05845123.1| cationic amino acid ABC transporter, periplasmic binding protein [Rhodobacter sp. SW2] gi|259020620|gb|EEW23939.1| cationic amino acid ABC transporter, periplasmic binding protein [Rhodobacter sp. SW2] Length = 339 Score = 406 bits (1045), Expect = e-111, Method: Composition-based stats. Identities = 157/342 (45%), Positives = 217/342 (63%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ L + L + A L D+K RG L CG N GL GFA ANG+++GFD Sbjct: 1 MKKSVFLGTLAVSGLL--AGMAAAGTLDDVKARGILNCGSNNGLTGFAAPDANGNYQGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 C+A+++A+ D SK++++PL + RF AL S ++D+L RN+ WT R+ L F Sbjct: 59 AALCKAIAAAVLGDASKVKFVPLTGETRFTALASGEVDVLIRNSTWTFSRDTDLKFDFVA 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K+ G+SS +L GA++C+Q GTTTEL LAD+FK++NM Y P+ Sbjct: 119 VNYYDGQGFMVKKELGVSSAKELDGATVCIQTGTTTELNLADFFKSNNMSYTPVTIADDS 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CDAYT D S L A++ T H+ILP+IISK PL P + GD W +I Sbjct: 179 EGQRQYVAGACDAYTTDASGLAAVRATLPDAENHIILPEIISKEPLGPVVRHGDNNWGDI 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT+YA+V+AEE GIT N+ + + TTNP+++R LG N+G +GL K+W R I Sbjct: 239 VRWTYYALVSAEENGITAANVEETASTTTNPEIKRLLGA-SDDNLGAMMGLDKEWAKRAI 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F NLG + + + RG NALW++GGL YAPP R Sbjct: 298 AAQGNYGEIFAANLGESTSIGLARGLNALWTQGGLQYAPPFR 339 >gi|218246879|ref|YP_002372250.1| family 3 extracellular solute-binding protein [Cyanothece sp. PCC 8801] gi|257059921|ref|YP_003137809.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 8802] gi|218167357|gb|ACK66094.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 8801] gi|256590087|gb|ACV00974.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 8802] Length = 363 Score = 406 bits (1045), Expect = e-111, Method: Composition-based stats. Identities = 145/326 (44%), Positives = 216/326 (66%), Gaps = 6/326 (1%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 +S + S L IK+RG L CG+N + GF+ V G + G DVD CRA+++A+FDDPSK Sbjct: 43 SSSKVSGSRLATIKERGTLICGVNGEVPGFSFVDEQGQYSGLDVDMCRAIAAALFDDPSK 102 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++Y L+A+ER A+QS ++D+L+RNT WT+ R+ ++G+ F P ++DGQG + K G Sbjct: 103 VEYRKLSAQERLTAVQSGEVDVLNRNTTWTMSRDTAVGMEFAPTVFYDGQGIMATKASGA 162 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHN-MKYHPIVFERVEEIDAAYRAHRCDAYTG 196 +++ L+G SICV AGTTTE LAD + Y+P+V + V+ + AAY+ RC+A T Sbjct: 163 NTLKDLTGKSICVLAGTTTEQNLADQMRKEGVTDYNPVVSDDVDALYAAYQEGRCEAVTS 222 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 D S L A + + +HVIL ++SK PL P + GD+ WY+ V W +A++ AEE GI Sbjct: 223 DRSQLVARRSIFPKKDDHVILDVVMSKEPLGPVVADGDSTWYDAVKWITFAVIQAEEFGI 282 Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316 T +N+ + T +P+++RFLGID +GE +GL D+ RII+H+GNYGE+++RN+G Sbjct: 283 TSQNLATF-ESTEDPNIKRFLGID--DKLGEDMGLPNDFAARIIKHVGNYGEIYERNIGK 339 Query: 317 QSELKIPRGYNALWSKGGLMYAPPIR 342 L + RG N LW+ GGL+Y+PP R Sbjct: 340 --PLGLERGQNQLWTNGGLLYSPPFR 363 >gi|282899899|ref|ZP_06307860.1| extracellular solute-binding protein, family 3 [Cylindrospermopsis raciborskii CS-505] gi|281195169|gb|EFA70105.1| extracellular solute-binding protein, family 3 [Cylindrospermopsis raciborskii CS-505] Length = 378 Score = 406 bits (1045), Expect = e-111, Method: Composition-based stats. Identities = 152/354 (42%), Positives = 236/354 (66%), Gaps = 15/354 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA------------SILGDIKKRGFLKCGINTGLVGFA 48 M K F + + +I+ +++ + G +K L CG++ L GF+ Sbjct: 28 MAKSFLLLAVAPLIIALLGCNSSPTSSTSTSTVQPRNTTGKVKTNLRLVCGVSGELPGFS 87 Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 V+ + + G DVD CRA+S+A+FD+P K+++ L+AKERF ALQ+ ++D+LSRNT WT Sbjct: 88 FVQTDSKYAGIDVDVCRAVSAALFDNPDKVEFRNLSAKERFTALQTGEVDLLSRNTTWTF 147 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168 R+ S+GL F P+ +DGQG ++ K GI+S++ L +IC Q GTTTE LAD + Sbjct: 148 SRDTSMGLYFSPVVLYDGQGIMIRKNSGINSLADLKNKAICTQTGTTTEQNLADQMRRRG 207 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 + Y P+VFE + A Y RCDA T D SAL + + T +P ++++L +++S PLAP Sbjct: 208 ISYKPVVFEDINVTFATYSEGRCDAITADRSALISRRTTLPKPEDNIVLNELLSSEPLAP 267 Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEA 288 A+ QGD +W+NIV W+ YA++ AEELGI +NI+Q + ++ +P+++RFLG + N+G+ Sbjct: 268 AVAQGDPQWHNIVKWSVYALIKAEELGINSQNISQFA-NSKDPEIKRFLGTEG--NLGQG 324 Query: 289 LGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GLT D+ RII+H+GNYGE++DR+LG++++L +PRG N L+SKGGL+Y+PP R Sbjct: 325 IGLTNDFAARIIKHVGNYGEIYDRSLGSKTKLNLPRGQNELYSKGGLLYSPPFR 378 >gi|163745575|ref|ZP_02152935.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Oceanibulbus indolifex HEL-45] gi|161382393|gb|EDQ06802.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Oceanibulbus indolifex HEL-45] Length = 338 Score = 406 bits (1045), Expect = e-111, Method: Composition-based stats. Identities = 151/342 (44%), Positives = 215/342 (62%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L + + + A+ L D+K RG L CG+ TGL GFA ANG+W+GFD Sbjct: 1 MKKTVIFG--ALTVAGLAAGAAGAATLDDVKARGKLNCGVTTGLAGFAAPNANGEWEGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ D + ++++P K RF AL S +ID L+RNT WT R+ L F Sbjct: 59 VAVCRAVAAAVLGDKNAVEFVPTTGKTRFTALASGEIDFLARNTTWTFSRDTDLKFDFIG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K G+SS L GA++C+Q GTTTEL LAD+F+ +N+ Y P+ E Sbjct: 119 VNYYDGQGFMVPKALGVSSAKDLDGATVCIQTGTTTELNLADFFRKNNISYEPVPVETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT D S L A + T + P +H++LP+IISK PL P + GD EW +I Sbjct: 179 EGQQQYLAGACDTYTTDASGLAATRATFETPGDHILLPEIISKEPLGPLVRHGDNEWGDI 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 W A++ AEELGIT NI +++ +T NP++ R LG + + +GE +GL +W R I Sbjct: 239 TRWVLNALIAAEELGITSANIEEMTGNTNNPEIARLLGTEGT--LGEMIGLDNEWAKRAI 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F +N+G ++ + + RG NA W+ GGL+YAPP+R Sbjct: 297 MAEGNYGEIFAKNIGEETPIGLARGLNAQWTDGGLLYAPPVR 338 >gi|316936277|ref|YP_004111259.1| family 3 extracellular solute-binding protein [Rhodopseudomonas palustris DX-1] gi|315603991|gb|ADU46526.1| extracellular solute-binding protein family 3 [Rhodopseudomonas palustris DX-1] Length = 344 Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats. Identities = 170/350 (48%), Positives = 234/350 (66%), Gaps = 14/350 (4%) Query: 1 MYKDFFVSILCLIILFFTSFST--------NASILGDIKKRGFLKCGINTGLVGFAEVKA 52 M+K F + L L ++ + + L +R + CG+N GL GFA Sbjct: 1 MFKRTFQTGLALGLVVAAGIAAAAVTYERYDTKTLKRTIRRDAVLCGVNKGLPGFATPDD 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G+W GFDVDFCRA+++AIFDDP+K+++LPL+A ERF LQS+++DILSRN+ W++ RE Sbjct: 61 KGNWTGFDVDFCRAVAAAIFDDPTKVKFLPLDANERFKELQSRKVDILSRNSTWSMSRET 120 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + L F + Y+DGQGF++ + I S +L G+ +CVQ GTTT+L LADYF+ +NM Y Sbjct: 121 NYELYFPAVAYYDGQGFMVPASRKIDSAVELDGSKVCVQNGTTTQLNLADYFRTNNMTYQ 180 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + E+ +++ AY+ +CD +T D+S LYAL+ T +HVILPD+ISK PLAP + Q Sbjct: 181 EVKSEKFDDVVKAYKDGQCDTFTADVSQLYALRKTFANAGDHVILPDVISKEPLAPVVRQ 240 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLT 292 D +W IV WT YAM+ AEELGIT +NI++ K + PDV R +G D + GE LGL+ Sbjct: 241 RDDDWMMIVKWTLYAMINAEELGITSQNIDEALK-SKKPDVMRLVGTDGA--FGEDLGLS 297 Query: 293 KDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 KDW RI+RH+GNYGE++DRN+G L IPRG N LWS GG+ YAPPIR Sbjct: 298 KDWAARIVRHVGNYGEVYDRNVGK---LGIPRGLNQLWSNGGIQYAPPIR 344 >gi|99080135|ref|YP_612289.1| lysine-arginine-ornithine-binding periplasmic protein [Ruegeria sp. TM1040] gi|99036415|gb|ABF63027.1| Lysine-arginine-ornithine-binding periplasmic protein [Ruegeria sp. TM1040] Length = 338 Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats. Identities = 155/342 (45%), Positives = 218/342 (63%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M F L + + + A L D+K R L CG++TGLVGF+ ANG+W+GFD Sbjct: 1 MNNSVFFG--ALTVAGLAAGAAAAGTLDDVKARDKLNCGVSTGLVGFSAPNANGEWEGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 + CRA+++A+ DPSK++Y+P K RF AL S +ID+L+RNT WT R++ L F Sbjct: 59 IAVCRAVAAAVLGDPSKVEYVPTTGKTRFTALASGEIDMLARNTTWTFSRDVDLKFEFVG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K+ G+SS +L GA++C+Q GTTTEL LAD+F+A+N+ Y P+ E Sbjct: 119 VNYYDGQGFMVPKELGVSSAKELDGATVCIQTGTTTELNLADFFRANNISYEPVPIETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT D S L A + T D + HVILP+IISK PL P + GD EW ++ Sbjct: 179 EARQQYLAGACDVYTTDASGLAATRATFDDAANHVILPEIISKEPLGPLVRHGDNEWGDV 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT AM+ AEELGIT N+ + + T NP++ R LG + + +GE LGL D+ + + Sbjct: 239 VRWTLNAMIAAEELGITSANLAEKAAGTDNPEINRLLGTEGT--LGEMLGLEADFAQKAL 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F + +G + + + RG NA W+ GGL+YAPP R Sbjct: 297 AAGGNYGEIFAKTIGEDTPVGLARGLNAQWTDGGLLYAPPFR 338 >gi|209883786|ref|YP_002287643.1| general L-amino acid-binding periplasmic protein AapJ [Oligotropha carboxidovorans OM5] gi|209871982|gb|ACI91778.1| general L-amino acid-binding periplasmic protein AapJ [Oligotropha carboxidovorans OM5] Length = 349 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 159/318 (50%), Positives = 223/318 (70%), Gaps = 3/318 (0%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 L +RG ++CG+N GL GF+ A+G+W GFDVD CRA+++AIFDDP+K+ ++PL+ Sbjct: 35 QTLKRTLRRGAVQCGVNAGLPGFSNKDASGNWSGFDVDICRAVAAAIFDDPTKVNFVPLD 94 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 +RF LQ++ +DILSRN+ W++ RE+ L F ++Y+DG+GF++ + + + S +L Sbjct: 95 TNQRFKELQNRTVDILSRNSTWSMSREVDYELTFAAVSYYDGEGFMLRRSRNVDSALELG 154 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G ICVQ+ TTT+L LADYF+A+NM Y + F V ++ AY + +CD T D S LYA Sbjct: 155 GTRICVQSDTTTQLNLADYFRANNMTYDEMKFGNVGDLLKAYESGQCDVLTTDTSQLYAY 214 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 +LT +P +HVIL DIISK PLAP + Q D +W IV W YAM+ AEELG++ KNI++ Sbjct: 215 RLTLAKPDDHVILADIISKEPLAPVVRQRDDQWMLIVKWAVYAMLNAEELGVSSKNIDEA 274 Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324 K + PDV R +G + S GEALGLT DW R+IRH+GNY E+++RN+G S+L IPR Sbjct: 275 LK-SKKPDVMRLVGTEGS--YGEALGLTNDWAARVIRHVGNYSEVYERNVGVSSKLGIPR 331 Query: 325 GYNALWSKGGLMYAPPIR 342 G N LW+ GG+ YAPPIR Sbjct: 332 GLNQLWNAGGIQYAPPIR 349 >gi|33594685|ref|NP_882329.1| putative ABC transporter periplasmic amino acid-binding protein [Bordetella pertussis Tohama I] gi|33598479|ref|NP_886122.1| putative ABC transporter periplasmic amino acid-binding protein [Bordetella parapertussis 12822] gi|33603422|ref|NP_890982.1| putative ABC transporter periplasmic amino acid-binding protein [Bordetella bronchiseptica RB50] gi|33564761|emb|CAE44086.1| putative ABC transporter periplasmic amino acid-binding protein [Bordetella pertussis Tohama I] gi|33574608|emb|CAE39258.1| putative ABC transporter periplasmic amino acid-binding protein [Bordetella parapertussis] gi|33577546|emb|CAE34811.1| putative ABC transporter periplasmic amino acid-binding protein [Bordetella bronchiseptica RB50] Length = 338 Score = 405 bits (1040), Expect = e-111, Method: Composition-based stats. Identities = 144/324 (44%), Positives = 227/324 (70%), Gaps = 3/324 (0%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 S + + ++KK+GF++CG++TG+ GF+ + G+WKG DVD CRA+++ +F D SK Sbjct: 18 SVAHAGATFDNVKKKGFVQCGVSTGIPGFSIADSKGEWKGLDVDMCRAIAATMFGDASKF 77 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + PLN ++RF ALQS ++D+L+RNT TL R+ +LGL + Y+D QG ++ K+ G+ Sbjct: 78 KVTPLNTQQRFTALQSGEVDVLTRNTTVTLTRDTTLGLIGVGVNYYDSQGVMVSKELGVK 137 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 S +L+GA++CVQ GTTTEL LAD+F+ + +++ P+V ++ +EI A+ A RCDA+T D Sbjct: 138 SAKELNGATVCVQPGTTTELNLADWFRGNKIEFKPVVIDKYDEIVRAFSAGRCDAFTTDK 197 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 S L + + T ++P +VILP+ SK PL P + QGD +W+N+V W+ AM+ AEE GIT Sbjct: 198 SQLASTRTTLEKPDNYVILPEDFSKEPLGPMVRQGDEQWFNVVRWSLNAMLEAEEYGITS 257 Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318 KN+++++K ++NP++QR LG+ + +G+ LG+ W + II+ +GNYGE F+ LG S Sbjct: 258 KNVDEMAK-SSNPNIQRILGV--TPGMGKNLGVDDKWAFNIIKQVGNYGESFEATLGKSS 314 Query: 319 ELKIPRGYNALWSKGGLMYAPPIR 342 +K+ RG NA + +GGLMY P+R Sbjct: 315 AMKLERGLNASYKQGGLMYGWPVR 338 >gi|330938900|gb|EGH42413.1| extracellular solute-binding protein [Pseudomonas syringae pv. pisi str. 1704B] Length = 324 Score = 404 bits (1039), Expect = e-110, Method: Composition-based stats. Identities = 148/324 (45%), Positives = 213/324 (65%), Gaps = 2/324 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L + + L IKK+GF++CG++ GL GF+ + G G D Sbjct: 3 MLKSTLAVVTALAAFGVIGAANAGTTLDAIKKKGFIQCGVSDGLPGFSVPDSTGKITGID 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D CRA+++A+F D +K+++ LNAKERF ALQS +IDILSRNT WT R+ +GL F Sbjct: 63 ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDAGMGLVFTG 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DG GF+++ K G++S +L GA+IC+QAGTTTEL ++DYF+++ +KY PI F+ + Sbjct: 123 VTYYDGIGFLVNNKLGVNSAKELDGATICIQAGTTTELNVSDYFRSNGLKYTPITFDTSD 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + RCD T D S LYA + +P ++++LP++ISK PL P + +GD EW++I Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYIVLPEVISKEPLGPVVRKGDEEWFSI 242 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEE IT KN+ +K T NPDV R LG D + G+ L L KDW +I+ Sbjct: 243 VRWTLFAMLNAEEAKITSKNVEAEAKSTKNPDVARMLGADGT--YGQDLKLPKDWVVQIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPR 324 + +GNYGE+F+RNLG + LKI R Sbjct: 301 KQVGNYGEVFERNLGEGTPLKIKR 324 >gi|260426367|ref|ZP_05780346.1| glutamate/glutamine/aspartate/asparagine-binding protein bztAprecursor [Citreicella sp. SE45] gi|260420859|gb|EEX14110.1| glutamate/glutamine/aspartate/asparagine-binding protein bztAprecursor [Citreicella sp. SE45] Length = 339 Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats. Identities = 148/343 (43%), Positives = 215/343 (62%), Gaps = 5/343 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L + + + A+ L D+K RG L CG++TGL GF+ ANG W+GFD Sbjct: 1 MKKTVILG--ALTVAGLAAGAAGAATLDDVKARGSLNCGVSTGLTGFSAPDANGVWQGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ DP ++++P + RF AL S +ID+L+RNT WT R++ L F Sbjct: 59 VAVCRAVAAAVLGDPMAVEFVPTTGQTRFTALASGEIDVLARNTTWTFSRDVDLKFEFIG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K G+SS +L GA++C+Q GTTTEL LAD+F+ +N+ Y P+ E Sbjct: 119 VNYYDGQGFMVPKALGVSSAKELDGATVCIQTGTTTELNLADFFRVNNISYEPVPIETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT D S L A + + + P +HVILP+IISK PL P + GD+EW +I Sbjct: 179 EAQQQYLAGACDVYTTDASGLAATRASFEAPGDHVILPEIISKEPLGPLVRHGDSEWGDI 238 Query: 241 VSWTHYAMVTAEELGITQKNINQV-SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 V WT A+V AEE G+T NI ++ + NP++ R LG + +G GL DW + Sbjct: 239 VRWTLNALVAAEEYGVTSANIGELSAAPGNNPEINRLLGTEGE--LGAMFGLEADWAKKA 296 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I GNYGE+F++ +G + + + RG NA W++GGL+Y+PP R Sbjct: 297 IMANGNYGEIFEKTIGENTPIGLSRGLNAQWTEGGLLYSPPFR 339 >gi|293602099|ref|ZP_06684552.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding protein [Achromobacter piechaudii ATCC 43553] gi|292819501|gb|EFF78529.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding protein [Achromobacter piechaudii ATCC 43553] Length = 357 Score = 403 bits (1037), Expect = e-110, Method: Composition-based stats. Identities = 142/317 (44%), Positives = 223/317 (70%), Gaps = 3/317 (0%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 ++KK+GF++CG++TG+ GF+ + G++KG DVD CRA++S +F D +K+++ PLN Sbjct: 44 TFDNVKKKGFVQCGVSTGIPGFSIADSKGEYKGIDVDMCRAIASTMFGDATKVKFTPLNT 103 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 ++RF ALQS ++D+L+RNT TL R+ +LGL + Y+D QG ++ K + S +L+G Sbjct: 104 QQRFTALQSGEVDVLTRNTTVTLTRDTTLGLIGVGVNYYDSQGVMVSKDLNVKSAKELNG 163 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 A+ICVQ GTTTEL LAD+F+ +++ P+V ++ +EI A+ A RCDA+T D S L + + Sbjct: 164 ATICVQPGTTTELNLADWFRGQKIEFKPVVIDKYDEIIRAFSAGRCDAFTTDKSQLASTR 223 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 T + P + VILP+ SK PL P + QGD +W+N+V W+ AM+ AEE GIT+ N+++++ Sbjct: 224 TTLENPDKFVILPEDFSKEPLGPMVRQGDEQWFNVVRWSLNAMLEAEEYGITKANVDEMT 283 Query: 266 KDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRG 325 K ++NP++QR LG+ + +G+ LG+ W Y II+++GNYGE F+ LG S +K+ RG Sbjct: 284 K-SSNPNIQRILGV--TPGMGKNLGVDDKWAYNIIKNVGNYGESFEATLGKGSAMKLERG 340 Query: 326 YNALWSKGGLMYAPPIR 342 NA + +GGLMY P+R Sbjct: 341 LNASYKQGGLMYGWPVR 357 >gi|126659578|ref|ZP_01730709.1| extracellular solute-binding protein, family 3 [Cyanothece sp. CCY0110] gi|126619121|gb|EAZ89859.1| extracellular solute-binding protein, family 3 [Cyanothece sp. CCY0110] Length = 334 Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats. Identities = 139/324 (42%), Positives = 214/324 (66%), Gaps = 6/324 (1%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 + + S L IK+RG L CG+N + GF+ V NG + G DVD CRA+++A+FDDP K++ Sbjct: 16 TTASTSRLDTIKQRGTLICGVNGEVPGFSFVDENGQYSGLDVDICRAIAAALFDDPEKVE 75 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 Y L+A+ERF A+QS ++D+L+RNT WT+ R+ + G+ F P ++DGQG ++ G+++ Sbjct: 76 YRKLSAQERFPAVQSGEVDVLNRNTTWTISRDTTNGMEFAPTVFYDGQGIMVTTASGVAN 135 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHN-MKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + L+G SICV AGTTTE LAD + Y+P+ FE V+ + AAY+ RC+ T D Sbjct: 136 MEGLAGKSICVLAGTTTEQNLADQMRKRGIEDYNPVTFEDVDALYAAYQEGRCEGVTADR 195 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 S L A + ++H IL ++SK PL PA+ D+ W++ V W ++++ AEELGI Sbjct: 196 SQLVARRSILPNRNDHAILNVVLSKEPLGPAVKNNDSAWFDAVKWITFSLIQAEELGINS 255 Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318 +NI + + +P+V+RFLG+D +GE +GL D+ R ++H+GNYGE+++RN+G Sbjct: 256 ENIETF-ETSEDPNVRRFLGLD--DKLGEGMGLPNDFAARAVKHVGNYGEVYERNIGE-- 310 Query: 319 ELKIPRGYNALWSKGGLMYAPPIR 342 L + RG N LW++GGL+Y+PP R Sbjct: 311 PLGLDRGQNNLWTEGGLLYSPPFR 334 >gi|92119138|ref|YP_578867.1| extracellular solute-binding protein [Nitrobacter hamburgensis X14] gi|91802032|gb|ABE64407.1| amino acid ABC transporter substrate-binding protein, PAAT family [Nitrobacter hamburgensis X14] Length = 345 Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats. Identities = 170/337 (50%), Positives = 233/337 (69%), Gaps = 3/337 (0%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 + ++ T + L +R + CG+NTGL GF+ V G+W GFDVDFCR Sbjct: 12 LAIATAIAVMAVTYERYDTKTLKRTLRRDAVLCGVNTGLPGFSNVDEKGNWSGFDVDFCR 71 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 A+++AIFDDP+K++++PL A ERF LQS+++DIL+RN+ W++ RE + L F + Y+D Sbjct: 72 AVAAAIFDDPAKVKFVPLAADERFKELQSRKVDILARNSTWSMSRETNFDLYFPAVAYYD 131 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 G+GF++ + +S L G ICVQ GTTT+L LADYFKA+N+ Y I F ++E++ A Sbjct: 132 GEGFMVRTSRKAASALDLGGTKICVQDGTTTKLNLADYFKANNLTYEEIKFGKLEDMLKA 191 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 Y +CD T D++ LYA++L +PSE ILPD+ISK PLAP + Q D +W IV WT Sbjct: 192 YDEAKCDVVTSDVAQLYAMRLRLTKPSESFILPDVISKEPLAPVVRQRDDDWMMIVKWTL 251 Query: 246 YAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGN 305 YAMV AEELG+T KNI++ K + PDV R +G + + GEALGLTKDW RIIRH+GN Sbjct: 252 YAMVNAEELGVTSKNIDEAMK-SKKPDVMRLVGTEGA--YGEALGLTKDWAARIIRHVGN 308 Query: 306 YGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 YGE++DRN+G S+LKIPRG N LW+ GG+MYAPP+R Sbjct: 309 YGEVYDRNVGADSKLKIPRGLNQLWNAGGIMYAPPLR 345 >gi|293605353|ref|ZP_06687737.1| general amino acid ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] gi|292816245|gb|EFF75342.1| general amino acid ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] Length = 338 Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 150/343 (43%), Positives = 219/343 (63%), Gaps = 6/343 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + + +L S + +KK+GFL+CG G+ GF+ + + G+W G D Sbjct: 1 MRK-FLTTAVAATLLCVASGAQAGVTFDAVKKKGFLQCG-FAGIPGFSVLDSKGEWTGLD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD CRA+++A+F D SK++ L A+ +F ALQS +ID+LSRNT TL R+ +LGL Sbjct: 59 VDMCRAVAAAMFGDASKVKGNVLTAQAKFTALQSGEIDMLSRNTTQTLTRDTTLGLIGVG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + ++D QG I+ K + SV +L GA+ICVQ GTTTEL LADYF++ + + P++ E + Sbjct: 119 VNFYDAQGLIVKKSMNVKSVKELDGATICVQPGTTTELNLADYFRSRGLTFKPVLVENYD 178 Query: 181 EIDAAYRAHRCDAYTGDISALYA-LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E + RCDAYT D S A ++ +P + IL + +SK PL P + QGD +W+N Sbjct: 179 ENFRLLESGRCDAYTNDKSNTAANMRTRLAKPEDWEILSENLSKEPLGPMVRQGDEQWFN 238 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 +V W+ AM+ AEE GIT KN++++ K +TNP+VQR LG+ + +G+ LGL W Y I Sbjct: 239 VVRWSLNAMLEAEEYGITSKNVDEMLK-STNPNVQRILGV--TPGMGKNLGLDDKWAYNI 295 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNYGE +DR +G S LK+ RG N W++GGLMY P+R Sbjct: 296 IKQVGNYGESYDRAMGKDSPLKLERGLNKQWTQGGLMYGWPVR 338 >gi|85703851|ref|ZP_01034954.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Roseovarius sp. 217] gi|85671171|gb|EAQ26029.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Roseovarius sp. 217] Length = 339 Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 154/343 (44%), Positives = 222/343 (64%), Gaps = 5/343 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ L + + ++ A+ L D+K RG L CG+ TGLVGFA ANG W+GFD Sbjct: 1 MKKTVFLG--ALTVAGLAAGASAAATLDDVKARGKLNCGVTTGLVGFAAPDANGVWEGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ D + ++++P K RF AL S +ID+L+RNT WT R+ L F Sbjct: 59 VAVCRAVAAAVLSDANAVEFVPTTGKTRFTALASGEIDMLARNTTWTFSRDTDLKFDFVG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K G+SS +L GA++C+Q GTTTEL LAD+F+A+N+ Y P+ E Sbjct: 119 VNYYDGQGFLVPKSLGVSSAKELDGATVCIQTGTTTELNLADFFRANNISYEPVPIETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT D S L + + + P++HVILP+IISK PL P + GD +W +I Sbjct: 179 EGQQQYLAGACDTYTTDASGLASTRAAFESPTDHVILPEIISKEPLGPLVRHGDNDWADI 238 Query: 241 VSWTHYAMVTAEELGITQKNINQV-SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 V WT YA+V AEE+GIT NI ++ + NP++ R LG + ++G +GL +W R Sbjct: 239 VRWTFYALVAAEEMGITSANIGELSAAAGDNPEINRILGTEG--DLGAMIGLDNEWAKRA 296 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I GNYGE+F++N+G ++ + + RG NA W++GG+MYAPP R Sbjct: 297 IAASGNYGEIFEKNIGEKTPIGLARGLNAQWTQGGIMYAPPFR 339 >gi|163854807|ref|YP_001629105.1| putative extracellular solute-binding protein [Bordetella petrii DSM 12804] gi|163258535|emb|CAP40834.1| putative extracellular solute-binding protein [Bordetella petrii] Length = 338 Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 145/317 (45%), Positives = 220/317 (69%), Gaps = 3/317 (0%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 +KK+GF++CG++TG+ GF+ + G+WKG DV CRA+++ +F+D +K + PLN Sbjct: 25 TFDSVKKKGFVQCGVSTGIPGFSMADSKGEWKGIDVAMCRAIAATMFNDSTKFKVTPLNT 84 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 ++RF ALQS ++D+L+RNT TL R+ +LGL + Y+D QG ++ K G+ S +L+G Sbjct: 85 QQRFTALQSGEVDVLTRNTTQTLTRDTTLGLIGAGVNYYDSQGVMVSKDLGVKSAKELNG 144 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 A+ICVQ GTTTEL LAD+F+ +++ P+V ++ +EI A+ A RCDA+T D S L + + Sbjct: 145 ATICVQPGTTTELNLADWFRGQKIEFKPVVIDKYDEIIRAFSAGRCDAFTTDKSQLASTR 204 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 T + P VILP+ SK PL P + QGD +W+NIV W+ AM+ AEE GIT KN+++++ Sbjct: 205 TTLENPDNFVILPEDFSKEPLGPMVRQGDEQWFNIVRWSLNAMLEAEEYGITSKNVDEMA 264 Query: 266 KDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRG 325 K ++NP++QR LG+ + +G+ LG+ W Y II+ +GNYGE+F+R LG S +K+ RG Sbjct: 265 K-SSNPNIQRILGV--TPGMGKNLGVDDKWAYTIIKQVGNYGEVFERTLGADSAMKLERG 321 Query: 326 YNALWSKGGLMYAPPIR 342 NA + GGLMY P+R Sbjct: 322 LNASYKDGGLMYGWPVR 338 >gi|27376134|ref|NP_767663.1| amino acid binding protein [Bradyrhizobium japonicum USDA 110] gi|27349273|dbj|BAC46288.1| bll1023 [Bradyrhizobium japonicum USDA 110] Length = 345 Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 156/317 (49%), Positives = 228/317 (71%), Gaps = 3/317 (0%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L +RG + CG+N GL GF+ G+W GFDVDFCRA+++AIF+DP+K +++ L+A Sbjct: 32 TLKRTVRRGEVLCGVNKGLPGFSIPDDKGNWTGFDVDFCRAVAAAIFNDPAKAKFVALDA 91 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 ERF LQS+++DILSRN+ W++ RE+ L F + Y+DG GF++ + + + L+G Sbjct: 92 SERFKELQSRKVDILSRNSTWSMARELDYDLYFPAVAYYDGAGFMLPRSRNKETSLDLTG 151 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 + +CVQ GTTT L ++DYF+A+NMKY + F++++++ AY +CD + D+S LYAL+ Sbjct: 152 SKVCVQTGTTTALNVSDYFRANNMKYEEVKFDKLDDVVKAYDTGKCDTLSADVSQLYALR 211 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 L +P +H+ILPD+ISK PLAP + Q D +W IV WT YAM+ AEELG++ +NI++ Sbjct: 212 LNLSKPGDHMILPDMISKEPLAPVVRQRDDDWMMIVKWTLYAMINAEELGVSSENIDEAL 271 Query: 266 KDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRG 325 K + P+V R +G + N GE LGLTKDW RIIR++GNYGEM++RN+G +S+LKIPRG Sbjct: 272 K-SKKPEVMRLVGTEG--NYGEQLGLTKDWVVRIIRNVGNYGEMYERNIGEKSKLKIPRG 328 Query: 326 YNALWSKGGLMYAPPIR 342 N LW+ GG+ YAPP+R Sbjct: 329 MNQLWNAGGVQYAPPMR 345 >gi|172037183|ref|YP_001803684.1| extracellular solute-binding protein [Cyanothece sp. ATCC 51142] gi|171698637|gb|ACB51618.1| extracellular solute-binding protein, family 3 [Cyanothece sp. ATCC 51142] Length = 349 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 139/324 (42%), Positives = 213/324 (65%), Gaps = 6/324 (1%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 + S L IK+RG L CG+N + GF+ V NG + G DVD CRA+++A+FDDP K++ Sbjct: 31 TTATTSRLDTIKQRGTLICGVNGEVPGFSFVDENGQYSGLDVDICRAIAAALFDDPEKVE 90 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 Y L+A+ERF A+QS ++D+L+RNT WT+ R+ + G+ F P ++DGQG ++ G++ Sbjct: 91 YRKLSAQERFPAVQSGEVDVLNRNTTWTISRDTTNGMEFAPTVFYDGQGIMVTTASGVAD 150 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHN-MKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + L+G SICV AGTTTE LAD + Y+P+ FE V+ + AAY+ RC+ T D Sbjct: 151 MEGLAGKSICVLAGTTTEQNLADQMRKRGIEDYNPVTFEDVDALYAAYQEGRCEGVTADR 210 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 S L A + ++H IL ++SK PL PA+ D+ W++ V W ++++ AEELGI Sbjct: 211 SQLVARRSILPNRNDHAILNVVLSKEPLGPAVKNNDSAWFDAVKWITFSLIQAEELGINS 270 Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318 +NI + + +P+V+RFLG+D +GE +GL D+ R+++H+GNYGE+++RN+G Sbjct: 271 QNIATF-ETSEDPNVRRFLGLD--DKLGEGMGLPNDFAARVVKHVGNYGEVYERNIGE-- 325 Query: 319 ELKIPRGYNALWSKGGLMYAPPIR 342 L + RG N LW++GGL+Y+PP R Sbjct: 326 PLGLDRGPNNLWTEGGLLYSPPFR 349 >gi|288959842|ref|YP_003450182.1| general L-amino acid transport system substrate-binding protein [Azospirillum sp. B510] gi|288912150|dbj|BAI73638.1| general L-amino acid transport system substrate-binding protein [Azospirillum sp. B510] Length = 356 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 144/335 (42%), Positives = 209/335 (62%), Gaps = 4/335 (1%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 ++ I L T + L IK RG +K G+ T GF +NG W+GF VDF RAL Sbjct: 26 ALSLAIGLALTGAAKAGPTLDAIKARGSIKVGVGT-QPGFFSPDSNGRWQGFFVDFGRAL 84 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 S A+F+DP K+Q++ + ++R ALQS + DIL T R LG F P+ ++DGQ Sbjct: 85 SIAVFNDPDKVQFVSSSPQQRLPALQSGEFDILLSGVTQTFTRATKLGFHFGPVVFYDGQ 144 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 G ++ KK G++ L+GA++CVQ GTT EL + D+F+ + + + P+V E E A+ Sbjct: 145 GLLVPKKLGVAKGKDLNGATVCVQTGTTGELNITDFFRQNKIAFKPVVIEETAENQKAFS 204 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 + RCD T D S L + +P ++V+LP+ ISK PLAPAI GD +W IV+W YA Sbjct: 205 SGRCDVLTQDASDLAITRTQLPKPDDYVLLPERISKEPLAPAIRYGDDQWLEIVNWAVYA 264 Query: 248 MVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYG 307 + AEELGITQ NI+ + +P ++RFLG+D S +GEA L + Y I++ +GNYG Sbjct: 265 TIQAEELGITQANIDSFL-TSADPTIRRFLGVDPS--LGEAAKLDPKFAYTIVKTVGNYG 321 Query: 308 EMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 E+FDRN+G +++ + RG+N LW++GGL+YAPP R Sbjct: 322 EIFDRNVGPATKVGLDRGFNKLWTQGGLLYAPPFR 356 >gi|313680184|ref|YP_004057923.1| amino acid ABC transporter substrate-binding protein, paat family [Oceanithermus profundus DSM 14977] gi|313152899|gb|ADR36750.1| amino acid ABC transporter substrate-binding protein, PAAT family [Oceanithermus profundus DSM 14977] Length = 339 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 147/324 (45%), Positives = 210/324 (64%), Gaps = 6/324 (1%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQY 80 S L +K+RG L CG+N G GF + GD+ GFDVDFCRA+++AIFDDP+K+ + Sbjct: 19 AQQSRLDVVKQRGKLICGVNGGAPGFGFIDEKTGDYVGFDVDFCRAVAAAIFDDPTKVDF 78 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +PLNAK RF A+Q+ ++D++ RNT T R+ LG+ F P+ ++DGQG ++ K G+ SV Sbjct: 79 VPLNAKVRFNAIQTGKVDVVFRNTTVTTSRDSQLGVDFLPVNFYDGQGVMVKKSLGVKSV 138 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L GA++C AGTTTE D +AHN+ + F+ + A + RCDA T D S Sbjct: 139 YDLKGATVCTNAGTTTEKNWTDVDRAHNLGTKLLTFDDFSKSMAGLESGRCDAVTTDKSG 198 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L K + P VILP+ +SK PLA Q D++W + ++W YA + AEE GITQ N Sbjct: 199 LVGWKAKSKDPESLVILPETLSKEPLAGFTFQNDSKWRDALTWIVYATMQAEEFGITQAN 258 Query: 261 INQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSEL 320 ++Q+ K ++NP ++RFLG++ +GE LGLT D+ R+IRH+GNYGE++ R+LG S Sbjct: 259 LDQMLK-SSNPGIRRFLGVES--KLGEGLGLTNDFAARVIRHVGNYGEIYARHLGPDSPF 315 Query: 321 KIPR--GYNALWSKGGLMYAPPIR 342 IPR NAL++ GGL+Y+PP R Sbjct: 316 FIPREGSLNALYTDGGLIYSPPFR 339 >gi|152998090|ref|YP_001342925.1| extracellular solute-binding protein [Marinomonas sp. MWYL1] gi|150839014|gb|ABR72990.1| extracellular solute-binding protein family 3 [Marinomonas sp. MWYL1] Length = 339 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 143/342 (41%), Positives = 215/342 (62%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +I+ +L ++ A L ++K RG +KCGI+ G GF+ G+W G D Sbjct: 1 MKKLIATAIIGAGVLSASASVYAADKLEEVKARGVMKCGIHPGKAGFSTPDTKGNWTGLD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ C+A+++A+F D SK++++ +N++ R AL + +ID+L+R+T +T R+ G+ Sbjct: 61 VELCKAVAAAVFGDASKVEFITMNSRNRLTALVTDEIDMLARSTTFTATRDGLNGVDVTT 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 ++DGQ ++ K+ G++S+ +L GA+IC GTT+E + DYF++ + Y ++ E Sbjct: 121 PWFYDGQALMVKKELGVNSIEELDGATICTYPGTTSEKNINDYFESRGLSYKALIVEGSA 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E AAY A+RCDA T D SAL A + PS +VILP+ ISK PL + QG+ EW + Sbjct: 181 ESTAAYLANRCDAVTNDASALAADRQGMPDPSANVILPERISKEPLGAYVKQGNDEWRQV 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V+WT A++ AEE GITQ N+++ K +T PDV R LG + S +G+ GL W Y I Sbjct: 241 VTWTAMALIEAEEQGITQSNVDEKLK-STKPDVMRLLGTEGS--LGKNFGLDDKWAYNAI 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+FDRNLG S LK RG N L++KGGL+YA P R Sbjct: 298 KAVGNYGEIFDRNLGKDSALKFDRGLNNLYTKGGLLYAYPFR 339 >gi|159042874|ref|YP_001531668.1| glutamate/glutamine/aspartate/asparagine ABC transporter [Dinoroseobacter shibae DFL 12] gi|157910634|gb|ABV92067.1| glutamate/glutamine/aspartate/asparagine ABC transporter [Dinoroseobacter shibae DFL 12] Length = 338 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 148/315 (46%), Positives = 215/315 (68%), Gaps = 2/315 (0%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 +++ RG + CGI+TGLVGFA ANG+W+GFDV CRA+++A+F DP+ + + P+ + Sbjct: 26 EEVQARGAVNCGISTGLVGFASQDANGEWQGFDVAVCRAVAAAVFGDPTAVNFNPVTNQV 85 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 RF L S +ID+L+RNT WT R++ L L F I Y+DGQGF++ K G+SS ++L GA+ Sbjct: 86 RFEVLNSGEIDMLARNTTWTFSRDVDLKLEFTGINYYDGQGFMVPKALGVSSATELDGAT 145 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 +C+Q GTTTEL LAD+F+A+N+ + P+ E Y A CD YT D S L A + + Sbjct: 146 VCIQKGTTTELNLADFFRANNISFEPVPISTASEAQQQYLAGACDVYTTDASGLAATRAS 205 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 + P EHV+LP+IISK PL P + GD EW +IV WT A++ AEELG+T N+ +++ Sbjct: 206 FESPDEHVVLPEIISKEPLGPLVRHGDNEWGDIVRWTLNALIAAEELGVTSANVAELAAG 265 Query: 268 TTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYN 327 T NP++ R LG + N+GE LGL+ DW +I+ GNYGE+F+ ++G + + + RG N Sbjct: 266 TDNPEINRLLGTEG--NLGEQLGLSADWAVNVIKAGGNYGEIFETHIGENTPIGLARGLN 323 Query: 328 ALWSKGGLMYAPPIR 342 A W++GGL+YAPP R Sbjct: 324 AQWTEGGLLYAPPFR 338 >gi|311109074|ref|YP_003981927.1| general L-amino acid-binding periplasmic protein AapJ 4 [Achromobacter xylosoxidans A8] gi|310763763|gb|ADP19212.1| general L-amino acid-binding periplasmic protein AapJ 4 [Achromobacter xylosoxidans A8] Length = 338 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 143/317 (45%), Positives = 221/317 (69%), Gaps = 3/317 (0%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 ++KK+GF++CG++TG+ GF+ + G++KG DVD CRA++S +F D +K+++ PLN Sbjct: 25 TFDNVKKKGFVQCGVSTGIPGFSIADSKGEYKGIDVDLCRAIASTMFGDATKVKFTPLNT 84 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 ++RF ALQS ++D+L+RNT TL R+ +LGL + Y+D QG ++ K + S +L+G Sbjct: 85 QQRFTALQSGEVDVLTRNTTVTLTRDTTLGLIGVGVNYYDSQGVMVSKDLNVKSAKELNG 144 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 A+ICVQ GTTTEL LAD+F+ +++ P+V ++ +EI A+ A RCDA+T D S L + + Sbjct: 145 ATICVQPGTTTELNLADWFRGQKIEFKPVVIDKYDEIIRAFSAGRCDAFTTDKSQLASTR 204 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 T + P + VILP+ SK PL P + QGD +W+NIV W+ AM+ AEE GIT+ N+++++ Sbjct: 205 TTLENPDKFVILPEDFSKEPLGPMVRQGDEQWFNIVRWSLNAMLEAEEYGITKANVDEMA 264 Query: 266 KDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRG 325 K + NP++QR LG+ + +G+ LG+ W Y II+++GNYGE F+ LG S +K+ RG Sbjct: 265 K-SPNPNIQRILGV--TPGMGKNLGVDDKWAYNIIKNVGNYGESFENTLGKSSAMKLERG 321 Query: 326 YNALWSKGGLMYAPPIR 342 NA + GGLMY P+R Sbjct: 322 LNASYKNGGLMYGWPVR 338 >gi|284052552|ref|ZP_06382762.1| extracellular solute-binding protein [Arthrospira platensis str. Paraca] Length = 355 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 144/357 (40%), Positives = 224/357 (62%), Gaps = 17/357 (4%) Query: 1 MYK-DFFVSILCLIILFFTS--------------FSTNASILGDIKKRGFLKCGINTGLV 45 M K F + CL L T+ T S L +K RGFL CG++ G+ Sbjct: 1 MRKWSFVLLASCLSALSLTACEPGGSPGSDGPAAGGTGQSRLNVVKNRGFLICGVDGGIP 60 Query: 46 GFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105 GF+ V +G++ G DVD C+A+++A+FDDP+ +QY L++ ERF A++S ++D+LSRNT Sbjct: 61 GFSFVDESGEYSGLDVDVCKAVAAALFDDPNAVQYRNLDSTERFEAMRSGEVDMLSRNTT 120 Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165 WTL R+ S+G+ F P T++DGQG ++ GI+++ ++CV+AGTTTEL L D + Sbjct: 121 WTLSRDTSVGMEFAPTTFYDGQGMMVRADSGITTLEDFQDLAVCVEAGTTTELNLTDNMR 180 Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225 + + + F++ + AAY RC+ T D S L A + T P++H+IL +SK P Sbjct: 181 ERGITFETVTFQQADPAYAAYAEGRCEGMTSDKSQLLARRSTLPNPNDHIILDVTMSKEP 240 Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNI 285 L P + D+ W++ V W +A+ AEELGITQ N+ Q+++ + NP ++RFLG++ ++ Sbjct: 241 LGPVTLNNDSAWFDTVKWVTFALFEAEELGITQANVEQIAQTSENPTIRRFLGVEG--DL 298 Query: 286 GEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 G +GLT D+ R+I+H+GNY E++DRNLG S+ +PR N LW+ GGL+++PP R Sbjct: 299 GTGMGLTNDFAARVIKHVGNYAEVYDRNLGTGSQFNLPRNENELWTNGGLLFSPPFR 355 >gi|298491367|ref|YP_003721544.1| family 1 extracellular solute-binding protein ['Nostoc azollae' 0708] gi|298233285|gb|ADI64421.1| extracellular solute-binding protein family 3 ['Nostoc azollae' 0708] Length = 355 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 160/360 (44%), Positives = 231/360 (64%), Gaps = 23/360 (6%) Query: 1 MYKDFFVSILCLIILFFT-------------SFSTNASILGD-----IKKRGFLKCGINT 42 M K F IL LFFT + S A+ + +K RG L CG++ Sbjct: 1 MLKSAF--ILASAPLFFTLAACSGESGTQVNTASAPATQVSRNIGSTVKNRGKLICGVSG 58 Query: 43 GLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102 L GF+ V + + G DVD CRA+++A+FD+P +++ LN KERF ALQ+ +ID+LSR Sbjct: 59 ELPGFSFVGTDAKYSGIDVDVCRAVTAALFDNPDAVEFRNLNTKERFTALQTGEIDLLSR 118 Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162 NT WT+ RE S+GL F P+ ++DGQ ++ K GI S++ L +IC Q GTTTE LAD Sbjct: 119 NTTWTMSRETSVGLQFAPVIFYDGQAIMVSKNSGIKSLADLKNKAICTQTGTTTEQNLAD 178 Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222 + ++ Y P+VFE V A Y RCD T D SAL + + T +P +++IL +++S Sbjct: 179 QMRKRSITYKPVVFEDVNITFATYAEGRCDGVTTDRSALISRRTTLPKPEDNIILDELLS 238 Query: 223 KSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKS 282 PLAPA+ +GD +W +IV W Y++V AEELGI +NI Q++ ++ +PD++RFLG + Sbjct: 239 SEPLAPAVAKGDPQWNDIVKWVVYSLVKAEELGINSQNIAQLT-NSNDPDIKRFLGTEG- 296 Query: 283 SNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 N+GE LGLT D+ RI++H+GNYGE++DRNLG +++L +PRG N L KGGL+Y+PP R Sbjct: 297 -NLGEGLGLTNDFAARIVKHVGNYGEVYDRNLGGKTKLNLPRGQNQLAIKGGLLYSPPFR 355 >gi|75677073|ref|YP_319494.1| extracellular solute-binding protein [Nitrobacter winogradskyi Nb-255] gi|74421943|gb|ABA06142.1| amino acid ABC transporter substrate-binding protein, PAAT family [Nitrobacter winogradskyi Nb-255] Length = 345 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 168/317 (52%), Positives = 226/317 (71%), Gaps = 3/317 (0%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L +R + CG+NTGL GF+ G+W GFDVDFCRA+++AIFDDPSK++++PL A Sbjct: 32 TLKRTLRRDAVLCGVNTGLPGFSSSDEKGNWSGFDVDFCRAVAAAIFDDPSKVKFVPLAA 91 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 ERF LQS+++DIL+RN+ W++ RE + L F + Y+DG+GF++ + S L Sbjct: 92 DERFKELQSRKVDILARNSTWSMSRETNFNLYFPAVAYYDGEGFMVRTSRKADSALDLGD 151 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 ICVQ+ TTT+L LADYF+A+N+KY I FE++E++ AY RCD T D+S LYAL+ Sbjct: 152 TKICVQSATTTQLNLADYFRANNLKYEEIRFEKLEDVLRAYDEARCDVVTADVSQLYALR 211 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 L +P+E ILPD+ISK PLAP + Q D +W I+ WT YAM+ AEELG+T KNI++ Sbjct: 212 LRLTKPNESFILPDVISKEPLAPVVRQRDDDWMMIIKWTLYAMINAEELGVTSKNIDEAM 271 Query: 266 KDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRG 325 K +T PDV R +G + GEALGLTKDW RIIRH+GNYGE++DRN+G +S LKIPRG Sbjct: 272 K-STKPDVMRLVGTEGQ--YGEALGLTKDWAARIIRHVGNYGEVYDRNIGTESRLKIPRG 328 Query: 326 YNALWSKGGLMYAPPIR 342 N W+ GG+MYAPP+R Sbjct: 329 LNQPWNAGGIMYAPPLR 345 >gi|220910023|ref|YP_002485334.1| family 3 extracellular solute-binding protein [Cyanothece sp. PCC 7425] gi|219866634|gb|ACL46973.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7425] Length = 364 Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats. Identities = 145/326 (44%), Positives = 210/326 (64%), Gaps = 3/326 (0%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 T+ L I RG L CG++ L GF+ V G++ G DVD CRA+++A+FDDP Sbjct: 42 TTADLQGTGRLATILNRGQLICGVSGELPGFSFVDQQGNYAGLDVDVCRAIAAALFDDPE 101 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 +++ LNAKERF ALQ+ +IDILSRNT T+ R+ ++G+ F P+ ++DGQG ++ + G Sbjct: 102 AVEFRNLNAKERFTALQTGEIDILSRNTTLTMSRDTAIGIQFAPVVFYDGQGIMVRNQDG 161 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 I S+ L G SIC+Q GTT E L D + + Y P++FE + + A Y RC A + Sbjct: 162 IRSLKDLQGKSICLQTGTTHEQNLTDQTRKLGIDYQPVIFEDINTMFATYAQGRCQAVSA 221 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 D S L + + T P+ + ILPD++SK PLAPA+ +GD W +V W Y+++ AEELGI Sbjct: 222 DRSGLISRRTTLPNPNGNEILPDVLSKEPLAPAVAKGDPTWSTVVEWIIYSLIEAEELGI 281 Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316 T +NI + + +P ++RFLG + N+G LGL+ D+ RII+ +GNYGE++DRNLG Sbjct: 282 TTQNIESKLQ-SADPTLRRFLGREG--NLGHGLGLSNDFAVRIIKGVGNYGEIYDRNLGP 338 Query: 317 QSELKIPRGYNALWSKGGLMYAPPIR 342 + L + RG N WSKGGL+Y+PP R Sbjct: 339 NTLLNLERGLNQQWSKGGLLYSPPFR 364 >gi|56751276|ref|YP_171977.1| polar amino acid transport system substrate-binding protein [Synechococcus elongatus PCC 6301] gi|81299057|ref|YP_399265.1| extracellular solute-binding protein [Synechococcus elongatus PCC 7942] gi|56686235|dbj|BAD79457.1| polar amino acid transport system substrate-binding proetin [Synechococcus elongatus PCC 6301] gi|81167938|gb|ABB56278.1| extracellular solute-binding protein, family 3 [Synechococcus elongatus PCC 7942] Length = 359 Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats. Identities = 141/322 (43%), Positives = 208/322 (64%), Gaps = 5/322 (1%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 + S L ++ RG L CG+ L GF+ + + G++ G DVD C+A+++A+F+DP I+Y Sbjct: 41 SNSRLNQVQARGKLLCGVEGRLPGFSFLDSQGNYSGLDVDICKAIAAALFNDPKAIEYRS 100 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLG--LAFRPITYFDGQGFIMHKKKGISSV 140 L++ ERF AL S ++D+LSRNT WTL R+ G L F P T++DGQG ++ + GI S+ Sbjct: 101 LDSVERFPALASGEVDLLSRNTTWTLSRDAKGGNNLEFAPTTFYDGQGLMVRRNSGIQSL 160 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 G SICV+ GTT+EL LAD + ++Y I F + AAY RC+ T D S Sbjct: 161 QDFQGKSICVETGTTSELNLADTMRELGVQYQEIKFPNSDANYAAYAQGRCEGVTSDRSQ 220 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L A + T +H +L +ISK PL+PA + D+ W+++V W A + AEE GITQ N Sbjct: 221 LAARRTTLSDADQHQLLDAVISKEPLSPATLNNDSPWFDVVKWVVNATIQAEEFGITQAN 280 Query: 261 INQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSEL 320 I+Q K + NP+++RFLG++ +G+ LGL+ D+ YR I+ +GNYGE+++RN+G QS L Sbjct: 281 IDQF-KTSKNPEIRRFLGLEGE--LGQQLGLSNDFAYRAIKAVGNYGEIYERNVGQQSPL 337 Query: 321 KIPRGYNALWSKGGLMYAPPIR 342 K+ RG N L+ GGL+Y+PP R Sbjct: 338 KLNRGLNQLYKNGGLLYSPPFR 359 >gi|222102263|ref|YP_002546853.1| polar amino acid ABC transport substrate-binding protein, aapJ-2 [Agrobacterium radiobacter K84] gi|221728380|gb|ACM31389.1| polar amino acid ABC transport substrate-binding protein, aapJ-2 [Agrobacterium radiobacter K84] Length = 347 Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats. Identities = 136/327 (41%), Positives = 204/327 (62%), Gaps = 4/327 (1%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 + + S L IK+RG +K G+ T GF ++G W+GF VDF RAL+ IF++P Sbjct: 25 LLPNMANAGSTLDKIKERGVIKVGVGTT-PGFFTPDSSGRWQGFFVDFGRALAVTIFNNP 83 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 K+++ + ++R ALQ+ + DIL T+ R LG F P+ ++DGQG ++ K Sbjct: 84 DKVEFTNSSPQQRLPALQAGEFDILLSGVTETITRAFKLGFHFGPVVFYDGQGLLVRKDL 143 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 G++ + L GA+I +Q+GTT EL +AD+F+ K+ P+ E E A + R DA T Sbjct: 144 GVTKGADLDGATIGIQSGTTGELNIADFFRKTGKKFTPVTIEETAEFTKALDSGRVDALT 203 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D + L A + +P ++V+LP+ +SK PLAPAI GD +W IV+WT YA + AEE G Sbjct: 204 QDSTDLAAKRTQLKKPDDYVLLPERLSKEPLAPAIRAGDDQWLEIVNWTIYATIQAEEFG 263 Query: 256 ITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLG 315 IT+ N++ K + +P +QRFLG+D S +G+A+GL + Y II+ +GNYGE+F+RN+G Sbjct: 264 ITKDNVDTFLK-SDDPAIQRFLGVDPS--LGQAIGLDPKFAYNIIKAVGNYGEIFERNVG 320 Query: 316 NQSELKIPRGYNALWSKGGLMYAPPIR 342 + L RG N LW+KGGL+Y+PP R Sbjct: 321 KGTPLNFDRGLNQLWTKGGLIYSPPFR 347 >gi|209524398|ref|ZP_03272947.1| extracellular solute-binding protein family 3 [Arthrospira maxima CS-328] gi|209495189|gb|EDZ95495.1| extracellular solute-binding protein family 3 [Arthrospira maxima CS-328] Length = 355 Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats. Identities = 140/355 (39%), Positives = 222/355 (62%), Gaps = 16/355 (4%) Query: 2 YKDFFVSILCLIILFFTS--------------FSTNASILGDIKKRGFLKCGINTGLVGF 47 + F + + CL L T+ + S L +K RG L CG++ G+ GF Sbjct: 3 KRGFLLLVSCLSALSLTACEPGGSPGSDGLAAGGSGQSRLNVVKNRGVLICGVDGGIPGF 62 Query: 48 AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + V +G++ G DVD C+A+++A+FDDP+ +QY L++ ERF A+++ ++D+LSRNT WT Sbjct: 63 SFVDQSGEYSGLDVDVCKAVAAALFDDPNAVQYRNLDSTERFEAMRAGEVDMLSRNTTWT 122 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 L R+ S+G+ F P T+ DGQG ++ GI+S+ ++CV+AGTTTEL L D + Sbjct: 123 LSRDTSVGMEFAPTTFHDGQGMMVRADSGITSLEDFQDRAVCVEAGTTTELNLTDNMRER 182 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 + + + F++ + AAY RC+ T D S L A + T P++H+IL +SK PL Sbjct: 183 GITFETVTFQQADPAYAAYAEGRCEGMTSDKSQLLARRSTLPNPNDHIILDVTMSKEPLG 242 Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGE 287 P + D+ W++ V W +A+ AEELGITQ N+ ++++ + NP ++RFLG++ ++G Sbjct: 243 PVTLNNDSAWFDTVKWVTFALFEAEELGITQANVEEIAQTSENPTIRRFLGVEG--DLGT 300 Query: 288 ALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GLT D+ R+IRH+GNY E++DRNLG S+ +PR N LW+ GGL+++PP R Sbjct: 301 GMGLTNDFAARVIRHVGNYAEVYDRNLGAGSQFNLPRNENELWTNGGLLFSPPFR 355 >gi|126728211|ref|ZP_01744027.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Sagittula stellata E-37] gi|126711176|gb|EBA10226.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Sagittula stellata E-37] Length = 336 Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 144/343 (41%), Positives = 211/343 (61%), Gaps = 8/343 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 MY+ I+ + + + A L ++K RG L CG+NTGLVGFA +NG+W+GFD Sbjct: 1 MYR-----IIGAGLAMLLAGAATAGTLDEVKSRGTLNCGVNTGLVGFASKDSNGEWRGFD 55 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ DP + ++ A RF AL + +ID+L RNT W+ +I L + F Sbjct: 56 VGLCRAVAAAVLGDPMAVNFVETTAATRFTALNAGEIDLLVRNTTWSFSTDIDLKVDFAG 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 I Y+DGQ F++ K G+SS +L G SICVQAGTT+ L + +YF + M Y + E Sbjct: 116 INYYDGQAFMVPKTLGLSSARELDGRSICVQAGTTSALNVDEYFDRYQMSYEAVPVEGTA 175 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y C+ Y+ D S L A++ T P +HV+L DIISK PL PA+ GD +W +I Sbjct: 176 EAQTLYLEGACEVYSSDASQLAAIRATFGNPGDHVLLEDIISKEPLGPAVRHGDNDWADI 235 Query: 241 VSWTHYAMVTAEELGITQKNINQVSK-DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 V WT A++ AEELG+ N++++ T+ P+++R LG++ +GE LGL DW R Sbjct: 236 VRWTLNALIAAEELGVNSANVDELKAQGTSTPEIKRLLGLEG--RMGEMLGLDSDWAVRA 293 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ GNYGE+F RN+G + + + RG N W++GGL+Y+PP R Sbjct: 294 IKAGGNYGELFSRNIGVDTPIGLSRGLNLQWTEGGLLYSPPFR 336 >gi|317404416|gb|EFV84833.1| extracellular solute-binding protein [Achromobacter xylosoxidans C54] Length = 338 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 143/341 (41%), Positives = 230/341 (67%), Gaps = 3/341 (0%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K ++ + + ++ + + ++KK+GF++CG++TG+ GF+ + G++KG DV Sbjct: 1 MKVLKLAAIGTALFAASAAANAGATFDNVKKKGFVQCGVSTGIPGFSIADSKGEYKGLDV 60 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D CRA+++ +F D SK + PLN ++RF ALQS ++D+L+RNT TL R+ +LGL + Sbjct: 61 DLCRAVAATMFGDASKFKVTPLNTQQRFTALQSGEVDVLTRNTTVTLTRDTTLGLIGVGV 120 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y+D QG ++ K + S +L+GA+ICVQ GTTTEL LAD+F+ +++ P+V ++ +E Sbjct: 121 NYYDSQGVMVSKDLNVKSAKELNGATICVQPGTTTELNLADWFRGQKIEFKPVVIDKYDE 180 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 I A+ A RCDA+T D S L + + T + P +++ILP+ SK PL P + QGD +W+N++ Sbjct: 181 IIRAFSAGRCDAFTTDKSQLASTRTTLENPDKYIILPEDFSKEPLGPMVRQGDEQWFNVI 240 Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301 W+ AM+ AEE GIT KN+++++K +TNP++QR LG+ + +G+ LG+ W Y II+ Sbjct: 241 RWSLNAMLEAEEYGITSKNVDEMTK-STNPNIQRILGV--TPGMGKNLGVDDKWAYNIIK 297 Query: 302 HMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGE F+ LG S +K+ RG NA + +GGLMY P+R Sbjct: 298 QVGNYGESFEATLGKSSAMKLERGLNASYKQGGLMYGWPVR 338 >gi|33592620|ref|NP_880264.1| putative extracellular solute-binding protein [Bordetella pertussis Tohama I] gi|33595874|ref|NP_883517.1| putative extracellular solute-binding protein [Bordetella parapertussis 12822] gi|33600404|ref|NP_887964.1| putative extracellular solute-binding protein [Bordetella bronchiseptica RB50] gi|33565953|emb|CAE36503.1| putative extracellular solute-binding protein [Bordetella parapertussis] gi|33568003|emb|CAE31916.1| putative extracellular solute-binding protein [Bordetella bronchiseptica RB50] gi|33572266|emb|CAE41818.1| putative extracellular solute-binding protein [Bordetella pertussis Tohama I] Length = 340 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 144/343 (41%), Positives = 220/343 (64%), Gaps = 4/343 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + ++ L + + L +KK+GF++CG+ G+ GF+ + G+W+G D Sbjct: 1 MKRHIAMAAGALALALGAQAAHAGPTLDAVKKKGFVQCGLTDGVAGFSATNSKGEWEGMD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD CRA+++A+F D K + L+ ++RF ALQS ++D+L R T R+ SLGLA Sbjct: 61 VDICRAVAAAVFGDAGKFKGTALSTQQRFTALQSGEVDVLLRTVTLTQTRDTSLGLAAVA 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +++DGQG ++ K G+ S +L A+ICVQ GTTTEL LAD+F+A+ +K+ P+V ++V Sbjct: 121 ASFYDGQGVLVRKALGVKSAKELDEATICVQPGTTTELNLADWFRANGIKFTPVVIDKVT 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E+ A+ + RCDA+T D S L A++ T +P + ILP+ SK PL P + QGD W Sbjct: 181 EVVRAFESGRCDAFTDDASQLAAVRATQVAKPDDFEILPERFSKEPLGPMVRQGDENWLG 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +A++ AEE GITQ+N++++ K + NP+V R LG+ + G+ +GL + W Y Sbjct: 241 IVRWTLFALMEAEEYGITQQNVDEMLK-SKNPNVLRILGV--TPGAGKNMGLDEKWAYNA 297 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY ++F+RN+G S L + RG NALWS+GG MY PIR Sbjct: 298 IKAVGNYSQIFERNVGKDSRLGLQRGVNALWSQGGAMYPWPIR 340 >gi|83592118|ref|YP_425870.1| extracellular solute-binding protein [Rhodospirillum rubrum ATCC 11170] gi|83575032|gb|ABC21583.1| extracellular solute-binding protein, family 3 [Rhodospirillum rubrum ATCC 11170] Length = 350 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 140/326 (42%), Positives = 203/326 (62%), Gaps = 3/326 (0%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 F+S + L IK RG +K G+ GF+ + G W+GF +D RAL+ +F+DP Sbjct: 28 FSSSAEAGETLDAIKARGVIKIGVGGNSPGFSAPDSAGRWQGFFIDIGRALAVTVFNDPE 87 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 K +++ + ++R ALQS + DIL T+ R LG F P+ ++DGQG ++ KK G Sbjct: 88 KAEFVNSSPQQRLPALQSGEFDILLSGVTQTITRATKLGFHFGPVVFYDGQGLLVPKKLG 147 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 I+ S+L GA++CVQ GTT EL +AD+F+ H + + P+V E E A+ + RCD T Sbjct: 148 ITKGSELDGATVCVQTGTTGELNIADFFRQHKISFKPVVIEESNEFLKAFASGRCDVLTQ 207 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 D S L + +++V+LP+ ISK PLAPAI GD W IV+WT YA++ AEELGI Sbjct: 208 DSSDLAIRRTLLPNAADYVLLPERISKEPLAPAIRYGDDRWLEIVNWTVYALIEAEELGI 267 Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316 TQ I+ + NP ++RFLG+D S + EA GL + Y II+ +GNYGE+F+R++G Sbjct: 268 TQATIDSFLG-SDNPSIRRFLGVDPS--LAEATGLDAKFAYNIIKALGNYGEVFERSVGK 324 Query: 317 QSELKIPRGYNALWSKGGLMYAPPIR 342 S+L RGYN W++GGL+Y+PP R Sbjct: 325 ASKLGFERGYNQPWTQGGLLYSPPFR 350 >gi|114766874|ref|ZP_01445796.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Pelagibaca bermudensis HTCC2601] gi|114540920|gb|EAU43980.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Roseovarius sp. HTCC2601] Length = 339 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 147/343 (42%), Positives = 214/343 (62%), Gaps = 5/343 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + L + + + +A+ L D+K RG L CG++TGL GF+ ANG W+GFD Sbjct: 1 MKNTVILG--ALTVAGLAAGAASAATLDDVKARGNLNCGVSTGLTGFSAPDANGVWQGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ DP ++++ + RF AL S +ID+L+RNT WT R+ L F Sbjct: 59 VAVCRAVAAAVLGDPMAVEFVSTTGQTRFTALASGEIDMLARNTTWTFSRDNDLKFEFVG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K+ G+SS +L GA++C+Q GTTTEL LAD+F+ +N+ Y P+ E Sbjct: 119 VNYYDGQGFMIPKELGVSSAKELDGATVCIQTGTTTELNLADFFRVNNINYEPVPIETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT D S L A + + + P +HVILP+IISK PL P + GD EW +I Sbjct: 179 EAQQQYLAGACDVYTTDASGLAATRASFETPGDHVILPEIISKEPLGPLVRHGDNEWGDI 238 Query: 241 VSWTHYAMVTAEELGITQKNINQV-SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 WT A++ AEE G+T NI ++ S T NP++ R LG + +G +GL DW + Sbjct: 239 ARWTLNALIAAEEYGVTSANIEELSSAPTDNPEINRLLGTEGE--LGAMIGLEADWAKKA 296 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I GNYGE+F++ +G + + + RG NA W++GGLMY+PP R Sbjct: 297 IMANGNYGEIFEKTIGENTPIGLSRGLNAQWTEGGLMYSPPFR 339 >gi|154245585|ref|YP_001416543.1| extracellular solute-binding protein [Xanthobacter autotrophicus Py2] gi|154159670|gb|ABS66886.1| extracellular solute-binding protein family 3 [Xanthobacter autotrophicus Py2] Length = 337 Score = 398 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 148/315 (46%), Positives = 209/315 (66%), Gaps = 3/315 (0%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 +K RG L CG++ GL GF+ A+G W GFDVD CR L++AIF+DP+K++++PL+A E Sbjct: 26 KTVKDRGELVCGVSKGLPGFSAPDASGKWTGFDVDVCRGLAAAIFNDPNKVKFVPLSADE 85 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 RF AL +D+LSRN+ WTL RE LGL F I Y+DGQGF++ + ++S +L + Sbjct: 86 RFPALTKGDVDMLSRNSTWTLEREAKLGLLFTAINYYDGQGFLVRDARKVTSALELDKSK 145 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 +CVQAGTT E DYF A+ M + ++ AY +CD T D+S LYAL+LT Sbjct: 146 VCVQAGTTAEDNTKDYFAANGMTLELVTLPTSTDLVKAYEEGKCDTLTTDVSQLYALRLT 205 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 +P +H++LPD+ISK PL P + QGD +W+N+V WT + M+ AEELG++ I+ Sbjct: 206 MAKPGDHIVLPDVISKEPLGPVVRQGDDQWFNLVKWTIFGMINAEELGVSTTTIDAALA- 264 Query: 268 TTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYN 327 + P+V R +G D GE LG++ D+ RI++ +GNYGE F+RN+G S+L IPRG N Sbjct: 265 SKKPEVIRLVGNDG--KFGEQLGVSNDFVVRIVKAVGNYGESFERNVGAASKLGIPRGIN 322 Query: 328 ALWSKGGLMYAPPIR 342 LWS GG+ YAPP+R Sbjct: 323 QLWSMGGIQYAPPVR 337 >gi|296537351|ref|ZP_06899216.1| ABC superfamily ATP binding cassette transporter, amino acid binding protein [Roseomonas cervicalis ATCC 49957] gi|296262324|gb|EFH09084.1| ABC superfamily ATP binding cassette transporter, amino acid binding protein [Roseomonas cervicalis ATCC 49957] Length = 344 Score = 398 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 152/318 (47%), Positives = 220/318 (69%), Gaps = 6/318 (1%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 +G I+ RG L CG+ GF+ + G +G D D CRA+++AIF D SK++++ Sbjct: 33 DTVGAIRARGALICGVTGTTAGFSLPDSQGVMRGIDADTCRAVAAAIFGDASKVRFVNTT 92 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 ++ RF ALQS ++D+L+RNT WTL RE SLG F I ++DGQGF++ ++S L Sbjct: 93 SQNRFTALQSGEVDMLARNTTWTLSREASLGFEFASINFYDGQGFMVKTSLNVTSAKALD 152 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 GA+ICVQ GTTTEL LADYF+ + M++ P+V E VEEI A+ + RCDAYT D S+L A Sbjct: 153 GATICVQPGTTTELNLADYFRTNRMRFTPVVIESVEEIRTAFNSGRCDAYTNDASSLAAF 212 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 + T P+E+++LP+IISK PL + +GD ++++IV W H+A VTAEELGIT +N+ Sbjct: 213 RATQANPAEYLLLPEIISKEPLGAVVRKGDWKFFDIVRWAHFAQVTAEELGITSQNLASF 272 Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324 + D+ NPDVQRF+G KS ++G LG+ DW +I+R +GN+GE+++RN+ + L + R Sbjct: 273 A-DSPNPDVQRFMG--KSGDLGRMLGVQADWAVQIVRQVGNFGEVWERNI---TPLGVQR 326 Query: 325 GYNALWSKGGLMYAPPIR 342 G N LW++GGL YAPP+R Sbjct: 327 GINRLWTQGGLQYAPPMR 344 >gi|330814052|ref|YP_004358291.1| glutamate Aspartate periplasmic binding protein precursor GltI [Candidatus Pelagibacter sp. IMCC9063] gi|327487147|gb|AEA81552.1| glutamate Aspartate periplasmic binding protein precursor GltI [Candidatus Pelagibacter sp. IMCC9063] Length = 343 Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats. Identities = 149/342 (43%), Positives = 221/342 (64%), Gaps = 6/342 (1%) Query: 4 DFFVSILCLIILFFTS--FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 F VSI +++L + S L K +GF+KCG++ GL GF+ A+G+W G DV Sbjct: 5 KFAVSIFAVLLLAACGNESAKKTSTLDTTKSQGFVKCGVSQGLPGFSNADASGNWAGMDV 64 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D CRA+++A+ D +K++Y PL+AKERF ALQ+ ID+LSRNT WTL R+ ++GL F + Sbjct: 65 DVCRAVAAAVLGDATKVKYTPLSAKERFTALQAGDIDVLSRNTTWTLERDAAIGLEFVGV 124 Query: 122 TYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 ++DGQGF++ KK GI SV +G +C GTTTEL +AD+FKA + Y P+VFE+ + Sbjct: 125 NFYDGQGFMVRKKSGIKSVKDFQNGTKVCTNTGTTTELNMADFFKAAGVSYEPVVFEKAD 184 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E+ AY + RCD YT D S L + + P +H++LP+ ISK PL P + +GD W ++ Sbjct: 185 EVVQAYDSGRCDTYTTDKSGLASQRTKLTAPDDHIVLPETISKEPLGPVVREGDATWADV 244 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V W+ + AEE G+ +NI+ + D+ NP +QR +G + + N G AL L + W+Y +I Sbjct: 245 VRWSLNVWIEAEEYGVNSENIDSMM-DSKNPAIQRIVGAEGTKN-GAALNLDQKWSYNLI 302 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNY E + RNL + + RG NALW+ GG++Y PP+R Sbjct: 303 KQVGNYAESYKRNL-ADTGIMPDRGPNALWTNGGILYVPPVR 343 >gi|85714820|ref|ZP_01045806.1| extracellular solute-binding protein, family 3 [Nitrobacter sp. Nb-311A] gi|85698306|gb|EAQ36177.1| extracellular solute-binding protein, family 3 [Nitrobacter sp. Nb-311A] Length = 345 Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats. Identities = 163/337 (48%), Positives = 227/337 (67%), Gaps = 3/337 (0%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 + ++ T + L +R + CG+N G+ GF+ G+W GFDVDFCR Sbjct: 12 LAIATAIAVMAITYERYDTKTLKRTLRRDAVLCGVNAGVPGFSNSDEKGNWSGFDVDFCR 71 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 A+++AIFDDP+K++++PL + ERF LQS+++DIL+RN+ W++ RE + L F + Y+D Sbjct: 72 AVAAAIFDDPAKVKFVPLESDERFKELQSRKVDILARNSTWSMSRETNYNLYFPAVAYYD 131 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 G+GF++ + S L ICVQ TTT+L LADYFKA+N+KY I F ++E++ A Sbjct: 132 GEGFMVRTSRKADSALDLGDTKICVQDSTTTKLNLADYFKANNLKYEEIKFGKLEDMLRA 191 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 Y +CD T D+S LYAL+L +P+E ILPD+ISK PLAP + Q D +W I+ WT Sbjct: 192 YDEAKCDVLTADVSHLYALRLRLTKPNESFILPDVISKEPLAPVVRQRDDDWMMIIKWTL 251 Query: 246 YAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGN 305 YAM+ AEELG+T KNI++ K + PDV R +G D GE LGLTKDW RI+RH+GN Sbjct: 252 YAMINAEELGVTSKNIDEAMK-SKKPDVMRLVGTDGQ--YGEGLGLTKDWAARIVRHVGN 308 Query: 306 YGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 YGE++DRN+G+ S LKIPRG N LW+ GG+MYAPP+R Sbjct: 309 YGEVYDRNIGSDSRLKIPRGLNQLWNAGGIMYAPPLR 345 >gi|237807991|ref|YP_002892431.1| extracellular solute-binding protein family 3 [Tolumonas auensis DSM 9187] gi|237500252|gb|ACQ92845.1| extracellular solute-binding protein family 3 [Tolumonas auensis DSM 9187] Length = 342 Score = 396 bits (1019), Expect = e-108, Method: Composition-based stats. Identities = 159/345 (46%), Positives = 234/345 (67%), Gaps = 6/345 (1%) Query: 1 MYK-DFFVSILCLIILFFT--SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K + + + L + + + L ++KK+G+++CG+N GL GF+ A G W+ Sbjct: 1 MSKLKYLTGVASAVALLVAGNAQAASGDTLANVKKKGYVQCGVNDGLPGFSSPNAKGAWE 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G DVD CRA+++A+F D SK++Y+PL KERF ALQS ++DILSRNT WT+ R+ +LGL Sbjct: 61 GMDVDVCRAVAAAVFADASKVKYIPLGGKERFTALQSGEVDILSRNTTWTMTRDATLGLK 120 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 TY+DGQGF+++K G+ S +L GA+IC + GTTTE+ +ADYF A+ MKY P+VF+ Sbjct: 121 STATTYYDGQGFMVNKSLGVKSAKELDGATICTEGGTTTEMNMADYFNANKMKYTPVVFD 180 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 ++ + + RCD T D S L+A+++ +P + +LP+IISK PL P + QGD W Sbjct: 181 NSDQTVKGFESGRCDVLTSDKSQLFAVRVKLAKPDDVAVLPEIISKEPLGPMVRQGDESW 240 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297 +V WT +AM+ AEELG++ KN+++++K + +PDV+R LG D G LG KDW Y Sbjct: 241 ELLVKWTVFAMINAEELGVSSKNVDEMAK-SGSPDVKRMLGYDAPD--GTTLGAVKDWGY 297 Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +I++ +GNY E+FDRN+G S LKI R N LW+KGG +YAPP+R Sbjct: 298 QIVKQVGNYAEVFDRNVGKDSPLKIVRTENNLWNKGGFLYAPPVR 342 >gi|291571845|dbj|BAI94117.1| putative ABC transporter substrate-binding protein [Arthrospira platensis NIES-39] Length = 343 Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats. Identities = 137/325 (42%), Positives = 216/325 (66%), Gaps = 2/325 (0%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 + T S L +K RGFL CG++ G+ GF+ V +G++ G DVD C+A+++A+FDDP+ Sbjct: 21 AAGGTGQSRLNVVKNRGFLICGVDGGIPGFSFVDESGEYSGLDVDVCKAVAAALFDDPNA 80 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 +QY L++ ERF A++S ++D+LSRNT WTL R+ S+G+ F P T++DGQG ++ GI Sbjct: 81 VQYRNLDSTERFEAMRSGEVDMLSRNTTWTLSRDTSVGMEFAPTTFYDGQGMMVRADSGI 140 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 +++ ++CV+AGTTTEL L D + + + + F++ + AAY RC+ T D Sbjct: 141 TTLEDFQDLAVCVEAGTTTELNLTDNMRERGITFETVTFQQADPAYAAYAEGRCEGMTSD 200 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 S L A + T P++H+IL +SK PL P + D+ W++ V W +A+ AEELGIT Sbjct: 201 KSQLLARRSTLPNPNDHIILDVTMSKEPLGPVTLNNDSAWFDTVKWVTFALFEAEELGIT 260 Query: 258 QKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQ 317 Q N+ Q+++ + NP ++RFLG++ ++G +GLT D+ R+I+H+GNY E++DRNLG Sbjct: 261 QANVEQIAQTSENPTIRRFLGVEG--DLGTGMGLTNDFAARVIKHVGNYAEVYDRNLGTG 318 Query: 318 SELKIPRGYNALWSKGGLMYAPPIR 342 S+ +PR N LW+ GGL+++PP R Sbjct: 319 SQFNLPRNENELWTNGGLLFSPPFR 343 >gi|115522563|ref|YP_779474.1| extracellular solute-binding protein [Rhodopseudomonas palustris BisA53] gi|115516510|gb|ABJ04494.1| extracellular solute-binding protein, family 3 [Rhodopseudomonas palustris BisA53] Length = 347 Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats. Identities = 157/317 (49%), Positives = 221/317 (69%), Gaps = 3/317 (0%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L +R + CG+N GL GF+ G W GFDVDFCRA+++AIFDDP K++++ L+A Sbjct: 34 TLKRTIRRDAVLCGVNKGLPGFSIPDDKGSWTGFDVDFCRAVAAAIFDDPKKVKFVALDA 93 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 ERF LQS+++DILSRN+ W++ RE L F + Y+DG GF++ + I S +L G Sbjct: 94 NERFKELQSRKVDILSRNSTWSMARETGFELYFPAVAYYDGAGFMLPASRKIDSALELDG 153 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 + +CVQ TTT+L +AD+F+A+N+KY + ++EE+ AY A +C+ + DIS LYAL+ Sbjct: 154 SQVCVQDATTTQLNVADFFRANNLKYQEVKAAKLEEVVKAYEAGQCNVLSADISQLYALR 213 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 + +P +H ILPD+ISK PLAP + Q D +W IV WT YAM+ AEELG++ NI++ Sbjct: 214 VNFAKPIDHTILPDVISKEPLAPVVRQRDDDWMMIVKWTLYAMINAEELGVSSTNIDEAL 273 Query: 266 KDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRG 325 K + PDV R +G + + GE LGL+KDW RIIRH+GNYGE+++RN+G+ S+L IPRG Sbjct: 274 K-SKKPDVMRLVGTEGA--YGEELGLSKDWAARIIRHVGNYGEVYERNVGSDSKLGIPRG 330 Query: 326 YNALWSKGGLMYAPPIR 342 N LWS GG+ YAPPIR Sbjct: 331 LNQLWSAGGIQYAPPIR 347 >gi|328950982|ref|YP_004368317.1| ABC-type transporter, periplasmic subunit family 3 [Marinithermus hydrothermalis DSM 14884] gi|328451306|gb|AEB12207.1| ABC-type transporter, periplasmic subunit family 3 [Marinithermus hydrothermalis DSM 14884] Length = 341 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 142/342 (41%), Positives = 217/342 (63%), Gaps = 11/342 (3%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDF 63 V++L + L F S + + +RG L CG+N GF + G ++GFD+DF Sbjct: 7 LLVAVLLVGALGF----AQQSRMDVVLERGKLVCGVNNVAPGFGFLNEQTGRFEGFDIDF 62 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 CRA+++A+FDDP ++Y+PL AK RF A+Q+ ++D++ RNT T+ R+ S+G+ F P+ + Sbjct: 63 CRAVAAALFDDPDAVEYVPLTAKARFSAIQTGEVDVVFRNTTITVSRDSSVGVDFLPVNF 122 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK-YHPIVFERVEEI 182 +DGQG ++ K+ G++SV +L GA++C GTTTE D+ +A + + FE ++ Sbjct: 123 YDGQGVMVKKELGVTSVFELEGATVCTNQGTTTEKNWTDFVRAQGWQGGQLLTFEDFSKV 182 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A+ + RCDA T D S L K P E VILP+ ISK PLA Q D++W + ++ Sbjct: 183 FNAFISGRCDAATTDKSGLAGWKAQASNPDEIVILPETISKEPLAGFTFQNDSKWRDALT 242 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302 W YA++ AEE GIT +N+++ K + +P ++RFLG++ GE LGL D+ RI+RH Sbjct: 243 WIVYALIQAEEFGITSENVDEFLK-SDSPAIRRFLGVEG--KFGEDLGLPNDFVVRILRH 299 Query: 303 MGNYGEMFDRNLGNQSELKIPR--GYNALWSKGGLMYAPPIR 342 +GNYGE++DR+LG +S IPR N LW++GGL+YAPP R Sbjct: 300 VGNYGEIYDRHLGPESPFYIPREGSLNELWTRGGLLYAPPFR 341 >gi|296534477|ref|ZP_06896902.1| ABC superfamily ATP binding cassette transporter, binding protein [Roseomonas cervicalis ATCC 49957] gi|296265196|gb|EFH11396.1| ABC superfamily ATP binding cassette transporter, binding protein [Roseomonas cervicalis ATCC 49957] Length = 449 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 130/327 (39%), Positives = 206/327 (62%), Gaps = 2/327 (0%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 S+ + L ++ RG L CG++TG+ GFA + G W+G DVD CR L++AIF+DP Sbjct: 125 AAAQTSSASPTLEAVRARGQLVCGVHTGIAGFALPDSRGVWQGLDVDLCRGLAAAIFNDP 184 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 +K++ +P+++ RF AL S ++D+L R + T+LR+ +LGL +FDG GF++ Sbjct: 185 AKLRLVPVSSSTRFTALGSGELDVLFRTSTQTMLRDTTLGLRHAVTYFFDGHGFMVRADS 244 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 G+ V++L GA+IC+ GTT E ADYF++ N + P+VFER +++ AA +A RCDA+ Sbjct: 245 GVQRVAELRGATICLVQGTTNEQVTADYFRSINTPFQPVVFERTDQVAAALQAGRCDAFG 304 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D S L A + + P++ +LP+ SK P + +GD W++IV W A++ AEE G Sbjct: 305 TDASQLAATRASLPNPAQWSVLPERFSKEPYGAYVRRGDDNWFDIVRWYTTAIIEAEEQG 364 Query: 256 ITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLG 315 +T N + + NP+ +R LG+ + +G+AL L W Y IR +GNY E++DR++G Sbjct: 365 VTAANAEAMRGSSANPNTRRLLGV--TPELGQALKLDPLWAYNAIRAVGNYAEIYDRHMG 422 Query: 316 NQSELKIPRGYNALWSKGGLMYAPPIR 342 + + +PRG N W++GGL+YA P+R Sbjct: 423 PATPIGLPRGPNEQWTRGGLLYAWPMR 449 >gi|159028157|emb|CAO89764.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 351 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 147/326 (45%), Positives = 210/326 (64%), Gaps = 6/326 (1%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 T+ S +A L +K RG L CGIN + GF+ V G++ G DV CRA+++A+FDDP+K Sbjct: 31 TANSPSADRLQTVKNRGKLICGINGEVPGFSFVNEKGEYSGLDVQICRAIAAALFDDPAK 90 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++Y L+ +ERF A+Q+ ++DILSRNT WT+ R+ +LG+ F ++DGQG + K I Sbjct: 91 VEYRKLSPQERFTAVQTGEVDILSRNTTWTINRDTALGMEFITPVFYDGQGIMATKASNI 150 Query: 138 SSVSQLSGASICVQAGTTTELTLADYF-KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 + LSG SICV +GTTTE LAD KA Y PIV + VE + AY+A RC A T Sbjct: 151 KKLEDLSGKSICVLSGTTTEQNLADAMAKAAVQGYKPIVSDDVEALYTAYQAGRCQAVTS 210 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 D S L A + RP +H +L +ISK PLAPA+ GD W N V ++++ EE GI Sbjct: 211 DRSQLVARRSVFPRPQDHQLLEVVISKEPLAPAVADGDPAWSNAVRSIVFSLIQGEEFGI 270 Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316 +NI + D+ +P ++RFLGID+ +GE +GL D+ R+++ +GNYGE++DR +G Sbjct: 271 NSQNIATFA-DSKDPSIRRFLGIDE--KLGEDMGLPNDFAQRVLKQVGNYGEIYDREIGQ 327 Query: 317 QSELKIPRGYNALWSKGGLMYAPPIR 342 L++ RG N LW+KGGL+Y+PP R Sbjct: 328 --PLQLDRGLNNLWTKGGLLYSPPFR 351 >gi|166368449|ref|YP_001660722.1| amino acid transport system substrate-binding protein [Microcystis aeruginosa NIES-843] gi|166090822|dbj|BAG05530.1| amino acid transport system substrate-binding protein [Microcystis aeruginosa NIES-843] Length = 351 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 147/326 (45%), Positives = 210/326 (64%), Gaps = 6/326 (1%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 T+ S +A L +K RG L CGIN + GF+ V G++ G DV CRA+++A+FDDPSK Sbjct: 31 TANSPSADRLQTVKNRGKLICGINGEVPGFSFVNEKGEYSGLDVQICRAIAAALFDDPSK 90 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++Y L+ +ERF A+Q+ ++DILSRNT WT+ R+ +LG+ F ++DGQG + K + Sbjct: 91 VEYRKLSPQERFTAVQTGEVDILSRNTTWTINRDTALGMEFITPVFYDGQGIMATKASNV 150 Query: 138 SSVSQLSGASICVQAGTTTELTLADYF-KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 + LSG SICV +GTTTE LAD KA Y PIV + VE + AY+A RC A T Sbjct: 151 KKLEDLSGKSICVLSGTTTEQNLADAMAKAAVQGYKPIVSDDVEALYTAYQAGRCQAVTS 210 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 D S L A + RP +H +L +ISK PLAPA+ GD W N V ++++ EE GI Sbjct: 211 DRSQLVARRSVFPRPQDHQLLEVVISKEPLAPAVADGDPAWSNAVRSIVFSLIQGEEFGI 270 Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316 +NI + D+ +P ++RFLGID+ +GE +GL D+ R+++ +GNYGE++DR +G Sbjct: 271 NSQNIATFA-DSKDPSIRRFLGIDE--KLGEDMGLPNDFAQRVLKQVGNYGEIYDREIGK 327 Query: 317 QSELKIPRGYNALWSKGGLMYAPPIR 342 L++ RG N LW+KGGL+Y+PP R Sbjct: 328 --PLQLDRGLNNLWTKGGLLYSPPFR 351 >gi|323698172|ref|ZP_08110084.1| extracellular solute-binding protein family 3 [Desulfovibrio sp. ND132] gi|323458104|gb|EGB13969.1| extracellular solute-binding protein family 3 [Desulfovibrio desulfuricans ND132] Length = 337 Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats. Identities = 142/339 (41%), Positives = 221/339 (65%), Gaps = 3/339 (0%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 I +I L + S A L +++ G L G++ G+ GF+ +NG W GFDVD Sbjct: 2 KTLSKIFMVIALLAMAGSALAGTLEKVQQNGELVLGVSEGVAGFSAPDSNGKWAGFDVDM 61 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 +A+++A+ +P I+Y+PL +K++ +A+ S Q+D+ SR T WT+ R+ G+ F + + Sbjct: 62 GKAVAAAVLKNPDAIKYVPLASKQKIVAVSSGQVDL-SRGTTWTMKRDCKQGVDFTVVLF 120 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 +DGQG ++ K G++ ++L GAS+ V +GTT+EL +AD+ +A+N+K +VFE +E Sbjct: 121 YDGQGLMVKKGLGVTKATELDGASVAVVSGTTSELNVADFARANNIKLETVVFESKKEAF 180 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 AY A R DA+T D+S L +L+ P EH+ILP++ SK PL+P + GD +W ++V+W Sbjct: 181 NAYVAGRADAFTTDVSQLASLRAGTTNPDEHIILPEVFSKEPLSPFVRHGDQQWKDLVTW 240 Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHM 303 + ++ AEE GITQ N+ ++ +T+P VQR LG + ++G + L DW R I+ + Sbjct: 241 VLFGLIEAEEKGITQANVLEMKAKSTDPVVQRMLGA--TGDVGALIDLDNDWLVRAIQAV 298 Query: 304 GNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGEM+DRN G +S LKIPRG+N LW+KGGL+YA PIR Sbjct: 299 GNYGEMYDRNFGPKSALKIPRGHNNLWTKGGLIYAMPIR 337 >gi|296535903|ref|ZP_06898057.1| amino-acid ABC superfamily ATP binding cassette transporter, substrate-binding protein [Roseomonas cervicalis ATCC 49957] gi|296263760|gb|EFH10231.1| amino-acid ABC superfamily ATP binding cassette transporter, substrate-binding protein [Roseomonas cervicalis ATCC 49957] Length = 325 Score = 394 bits (1013), Expect = e-107, Method: Composition-based stats. Identities = 144/317 (45%), Positives = 212/317 (66%), Gaps = 4/317 (1%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L ++ + L C N G GF + G+ +G D D CRA+++A+ ++I++ L + Sbjct: 13 TLAAVRAKALLDCSANQGSPGFGVPDSRGEQQGLDPDICRAVAAAVLGPNARIRWTVLTS 72 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 R ALQS Q+DI++R WT RE++ GL F ++DGQGFI+ K G++ +QL G Sbjct: 73 ATRVTALQSGQVDIVARTFTWTHAREVNAGLQFASPVFYDGQGFIVPKASGVTRAAQLDG 132 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 ASICV AG+T EL LAD+ +++ ++ +P+VFE E+ AY + RCDAYT D S L Sbjct: 133 ASICVTAGSTNELNLADWARSNGLRVNPVVFEGNEDTRKAYTSGRCDAYTLDASQLAGFA 192 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 T R EHVIL DIISK PL+PA+ +GD +WY+IV WT +A++ AEE GITQ N++ + Sbjct: 193 TTLPR-GEHVILSDIISKEPLSPAVRKGDAQWYDIVRWTIFALILAEEHGITQANVDSML 251 Query: 266 KDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRG 325 + + NP+V+R LG+ + + G A+GL + W Y I+ +GNYGE+F+R+LG +S L + RG Sbjct: 252 E-SQNPEVRRLLGV--AGDHGPAMGLDRRWAYNAIKAVGNYGEIFERHLGAESPLGLERG 308 Query: 326 YNALWSKGGLMYAPPIR 342 NALW++GGL+YAPP+R Sbjct: 309 LNALWNRGGLLYAPPMR 325 >gi|33600508|ref|NP_888068.1| ABC transporter substrate-binding protein [Bordetella bronchiseptica RB50] gi|33568107|emb|CAE32020.1| Putative ABC transport system, substrate-binding protein [Bordetella bronchiseptica RB50] Length = 336 Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats. Identities = 147/342 (42%), Positives = 209/342 (61%), Gaps = 6/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L + + T+ +A L D+K RG L C TG GF+ G G + Sbjct: 1 MKKTL--TSLLVAAIAHTAAPVHAGTLEDVKARGNLLCSSTTGSPGFSMPDDAGKRHGLE 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD CRA+++A+F DP + + + LN +RF ALQS ++DIL T WTL RE + L + Sbjct: 59 VDVCRAIATAVFGDPERHKIVVLNPTQRFTALQSGEVDILFNTTTWTLSREGAGAL-YAG 117 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DGQG ++ K I+S +L G +IC G+TTEL L D+F+A+ + I F V+ Sbjct: 118 VTYYDGQGVLVRKGT-IASAKELDGGAICTNQGSTTELNLVDFFRANKVSNEVITFATVQ 176 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E AY + RCDA++ D L AL+ P +HVIL D +SK PL A+ +GD W+++ Sbjct: 177 EAANAYESGRCDAWSADAGILAALRSKMKAPDDHVILADRLSKEPLGAAVRKGDDAWFSV 236 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V W+ +A+ AEELG+T KNI + +K TTNP+V RF+G + S +G+ LGL DW Y+I+ Sbjct: 237 VRWSIFALQAAEELGLTSKNIAEQAKSTTNPEVLRFVGKEGS--LGKVLGLNGDWAYQIV 294 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +G+Y E+FDRN+G S L + RG NA W GGL Y PP R Sbjct: 295 AQVGSYAEIFDRNIGAASPLNLERGINASWKNGGLFYTPPFR 336 >gi|299134008|ref|ZP_07027201.1| extracellular solute-binding protein family 3 [Afipia sp. 1NLS2] gi|298590755|gb|EFI50957.1| extracellular solute-binding protein family 3 [Afipia sp. 1NLS2] Length = 350 Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats. Identities = 161/333 (48%), Positives = 224/333 (67%), Gaps = 3/333 (0%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 + + F + L KRG + CG+N GL GFA ANG+W GFDVD CRA+++ Sbjct: 21 IVAVGAFTALDRYDTQTLKRTVKRGAVNCGVNAGLPGFANKDANGNWSGFDVDICRAVAA 80 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 A+FDD +K+ ++PL+ +RF LQ++++DILSRN+ W++ RE+ L F ++Y+DG+GF Sbjct: 81 AVFDDATKVNFIPLDTNQRFKELQNRKVDILSRNSTWSMSREVDYDLTFAAVSYYDGEGF 140 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 ++ + + + S +L G +CVQ+ TTT+L LADYFK +N+ Y + F V ++ AY A Sbjct: 141 MVRRSRNVDSALELGGTRVCVQSDTTTQLNLADYFKVNNITYDEMKFGNVSDMLKAYEAG 200 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 +CD T D S LYA + +P +HVIL DIISK PLAP + Q D +W IV W YAM+ Sbjct: 201 KCDVLTTDTSQLYAYRQNLAKPDDHVILADIISKEPLAPVVRQRDDQWMLIVKWAVYAML 260 Query: 250 TAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEM 309 AEELG+T KNI++ K + PDV R +G + N GE LGLTKDW RIIRH+GNYGE+ Sbjct: 261 NAEELGVTSKNIDEALK-SKKPDVMRLVGTEG--NYGEELGLTKDWAARIIRHVGNYGEV 317 Query: 310 FDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++RN+G S+L IPRG N LW+ GG+ YAPPIR Sbjct: 318 YERNVGLGSKLGIPRGLNQLWNAGGIQYAPPIR 350 >gi|220914746|ref|YP_002490054.1| extracellular solute-binding protein family 3 [Methylobacterium nodulans ORS 2060] gi|219952497|gb|ACL62887.1| extracellular solute-binding protein family 3 [Methylobacterium nodulans ORS 2060] Length = 341 Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats. Identities = 137/347 (39%), Positives = 224/347 (64%), Gaps = 11/347 (3%) Query: 1 MYKDFFVSILCLIILFFT----SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M + +IL + F + + + + DI+ RG L CG+ G GF+ + G Sbjct: 1 MNRVLAGAILFGALAAFADPSWAQGSGSKTIDDIRARGQLVCGVTAGAAGFSLPDSRGVM 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +G D D CRA+++A + K++Y+P RF ALQS +IDIL R+T WTL RE +LGL Sbjct: 61 RGIDADICRAVAAATLGEADKVRYVPTTVTNRFTALQSGEIDILVRSTTWTLSREANLGL 120 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F + +FDG GF+++K G+ S +L+GA+IC+Q GT+TEL +ADYF+ H MK+ PI+ Sbjct: 121 EFAGVYFFDGTGFMVNKSLGVKSSKELNGATICIQPGTSTELAVADYFREHGMKFKPILI 180 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDT 235 + E + + RCDAY+ DISAL + + + ++V+LP++ISK P+ + +GD Sbjct: 181 QDPAETQNTFISGRCDAYSMDISALASFRFQQGPKKDDYVLLPEVISKEPVGVMVRKGDE 240 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDW 295 +++++V W+ A++ EE G+TQ N++Q+ D+ +P ++R LG++ ++G+A+G+ W Sbjct: 241 KFFDLVRWSMIALLQGEESGVTQANVDQML-DSKDPTIRRMLGLEG--DLGKAMGVDNKW 297 Query: 296 TYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 Y+I++ +GN+GE+++RN+ + L I RG NALW+KGGL Y PP+R Sbjct: 298 AYKILKSVGNFGEIWERNI---APLGISRGINALWTKGGLHYPPPMR 341 >gi|160899043|ref|YP_001564625.1| extracellular solute-binding protein [Delftia acidovorans SPH-1] gi|160364627|gb|ABX36240.1| extracellular solute-binding protein family 3 [Delftia acidovorans SPH-1] Length = 345 Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats. Identities = 154/319 (48%), Positives = 222/319 (69%), Gaps = 3/319 (0%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 L IK+RG + CG++TG GFA +G+W G DVD CRA+++A D SK++++P Sbjct: 28 GKTLDGIKQRGAVACGVHTGRAGFALADGSGNWSGLDVDLCRAVAAATLGDASKVKFIPT 87 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 + + R ALQS +ID+L+RNT WT R+ LGL + I + DGQGF+ KK G++SV QL Sbjct: 88 SGQTRITALQSGEIDLLARNTTWTFTRDNGLGLMWAGINFHDGQGFMARKKPGLNSVKQL 147 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 SGA+ICV +G+TTE TL++YF+AH + Y +VF+ E A+ + RC AYTGD+ AL Sbjct: 148 SGATICVISGSTTEKTLSEYFRAHKLNYKAVVFDNPEAALQAFSSGRCQAYTGDLGALAV 207 Query: 204 LK-LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 L+ P ++VILP++ISK P PA+ +GD EW+ +V WT AM+ AEELGITQ N + Sbjct: 208 LRGKELANPDDYVILPEVISKEPAGPAVRRGDDEWFAVVRWTLNAMIEAEELGITQANAD 267 Query: 263 QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKI 322 ++ + + V+RFLG +S ++G+ LGL K+W RI++ +GNYGE ++RNLG +S L + Sbjct: 268 ELKTRSDSIQVKRFLG--QSDDLGKQLGLDKEWALRIVKAVGNYGESYERNLGAKSGLNV 325 Query: 323 PRGYNALWSKGGLMYAPPI 341 PRG NAL++KGGLM +PP+ Sbjct: 326 PRGKNALFTKGGLMMSPPM 344 >gi|262277476|ref|ZP_06055269.1| general L-amino acid-binding periplasmic protein AapJ [alpha proteobacterium HIMB114] gi|262224579|gb|EEY75038.1| general L-amino acid-binding periplasmic protein AapJ [alpha proteobacterium HIMB114] Length = 347 Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats. Identities = 157/346 (45%), Positives = 225/346 (65%), Gaps = 7/346 (2%) Query: 1 MYKDFFVSILCLIILFFT---SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M +S+L ++ S L K +GF+KCG++ G+ GF+ A+G+W Sbjct: 5 MKAIGSLSVLAFVLTACGDGGGAKKTTSTLDTTKSQGFVKCGVSQGVPGFSNADASGNWT 64 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G DVD CRA+++A+ D SK++Y L+AKERF ALQ+ +IDILSRNT WTL R+ S+GL Sbjct: 65 GIDVDVCRAVAAAVLGDASKVKYTGLSAKERFTALQAGEIDILSRNTTWTLERDASIGLT 124 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F + ++DGQGF++ K G+ SV+ G +C GTTTEL +AD+FK+ +KY P+VF Sbjct: 125 FVGVNFYDGQGFMVRKSTGLKSVNDFKNGVKVCTNLGTTTELNMADFFKSKGVKYEPVVF 184 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E+ +E+ AY A RCD YT D SAL A P+EHV+LP+ ISK PL P + QGD++ Sbjct: 185 EKADEVVQAYDAGRCDTYTTDKSALAAQSTKMKDPTEHVVLPETISKEPLGPVVRQGDSK 244 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWT 296 W ++V W+ + AEE G+ NI+ + K++ NP +QR +G + + N GEALGL W+ Sbjct: 245 WEDVVRWSLNVFIEAEEYGVNSGNIDSM-KESKNPAIQRIVGAEGTKN-GEALGLDNQWS 302 Query: 297 YRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 YRII+ +GNYGE + RNL + + RG N LW+KGG++Y PP+R Sbjct: 303 YRIIKQIGNYGESYKRNL-ADTNIMPERGPNQLWTKGGILYVPPVR 347 >gi|158422580|ref|YP_001523872.1| extracellular solute-binding protein [Azorhizobium caulinodans ORS 571] gi|158329469|dbj|BAF86954.1| extracellular solute-binding protein [Azorhizobium caulinodans ORS 571] Length = 336 Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats. Identities = 155/339 (45%), Positives = 226/339 (66%), Gaps = 4/339 (1%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 +++ + FT+ + A L +K RG L CG++TG+ GF++ + +G W GFDVDF Sbjct: 2 KTLFALVAGAAVAFTAPAAMAQTLKAVKDRGTLNCGVSTGIPGFSQ-QVDGKWSGFDVDF 60 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 CRA+++A+ +DP+K+ ++PLNA++RF AL ++D+LSRNT WTL RE F +TY Sbjct: 61 CRAVAAAVLNDPAKVNFVPLNAEDRFTALSGSKVDLLSRNTTWTLEREAKQKFLFGAVTY 120 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 FDGQGF++ + I S +L G+ +CVQ GTT DYFK +NMK + V+++ Sbjct: 121 FDGQGFLVPAARKIESALELDGSKVCVQVGTTAASYAEDYFKTNNMKLELVTLPTVQDLV 180 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 AY C+ + D+SALYAL+ +P+ H++LPD+I+K PL P + QGD EW+N+V W Sbjct: 181 KAYENGTCNTISTDVSALYALRTGFAKPASHIVLPDVITKEPLGPVVRQGDDEWFNVVKW 240 Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHM 303 THY M+ EELG++ ++++ K + PDV+R +G D + G LGLTKD+ RIIR + Sbjct: 241 THYVMINGEELGVSSLSLDEALK-SQKPDVKRLVGTDG--DFGTELGLTKDFAVRIIRAV 297 Query: 304 GNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE F+RN+G S+L IPRG N LWS GG+ YAPP+R Sbjct: 298 GNYGEAFERNIGTGSKLAIPRGVNQLWSAGGIQYAPPVR 336 >gi|71083646|ref|YP_266366.1| ABC transporter [Candidatus Pelagibacter ubique HTCC1062] gi|71062759|gb|AAZ21762.1| ABC transporter [Candidatus Pelagibacter ubique HTCC1062] Length = 346 Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats. Identities = 150/350 (42%), Positives = 220/350 (62%), Gaps = 12/350 (3%) Query: 1 MYK--DFFVSILCLIILFFT-----SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M+K S++ ++ + FT + + L + +K+GF++CG++ GL GF+ A Sbjct: 1 MFKYVKQLTSLVAMVAVLFTFTTETMAAKKSKTLKNTQKKGFVRCGVSQGLPGFSNADAA 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+W G DVD CRA+++A+ D +K+++ PL+AKERF AL S +IDILSRNT WTL R+ Sbjct: 61 GNWTGVDVDVCRAVAAAVLGDANKVKFTPLSAKERFTALTSGEIDILSRNTTWTLSRDAD 120 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYH 172 +GL F + ++DGQGF++ K GI+S SQ G S C GTTTEL + D+F + + Y Sbjct: 121 IGLTFVGVNFYDGQGFMVRKDSGITSTSQFKNGISACTNIGTTTELNMRDFFNSKGISYE 180 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 P+ FE+ +E+ AAY + RCD YT D S L A + P +HV+LP+ ISK PL P + Q Sbjct: 181 PVAFEKADEVVAAYDSGRCDTYTTDKSGLAAQRTKMTNPDDHVVLPETISKEPLGPVVRQ 240 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLT 292 GD W +IV W+ M+ AEE GI N + + K + NP ++R +G + +G A GL Sbjct: 241 GDAVWEDIVRWSLNVMIEAEEYGINSANAD-MMKTSENPQIKRLVGSEGE--LGAAFGLD 297 Query: 293 KDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 DW+ RII+ +GNYGE + RN+ + + RG N +W+KGGL+Y PP R Sbjct: 298 NDWSLRIIKQVGNYGESYKRNI-ADTGILPDRGPNQIWTKGGLLYVPPAR 346 >gi|315499877|ref|YP_004088680.1| extracellular solute-binding protein family 3 [Asticcacaulis excentricus CB 48] gi|315417889|gb|ADU14529.1| extracellular solute-binding protein family 3 [Asticcacaulis excentricus CB 48] Length = 370 Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats. Identities = 147/330 (44%), Positives = 221/330 (66%), Gaps = 4/330 (1%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 T ++++ L + RG + CG++ GL+GF+ +G W+GFDVDFCRAL++AIF D Sbjct: 43 ATLTPTQSDSATLKAVLARGRVSCGVHPGLIGFSYKDNSGRWRGFDVDFCRALAAAIFSD 102 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 K+ Y+PL ERF AL++ ++D+L R+T WTL R+ + + + I Y+DGQGF++ K Sbjct: 103 ADKVTYVPLTTTERFEALKTGKVDVLWRSTSWTLSRDAADQVDYAGINYYDGQGFLVRKS 162 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 ++S ++L+GA ICVQ G+T+EL LAD+F+A +KY+P+V + +E AY A +CDA Sbjct: 163 LRLNSATELNGARICVQTGSTSELNLADFFRARGLKYNPVVVKNEDEGRDAYAAGQCDAL 222 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 + D+SAL A + T P+ H ILP+IISK PL P + QGD +W +IV WT Y + AEEL Sbjct: 223 SSDVSALAAARATLSDPTAHTILPEIISKEPLGPVVRQGDDQWTDIVRWTLYVTIVAEEL 282 Query: 255 GITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNL 314 G++ + + ++ NP+V+R + N+G LGL +W Y I+ +GNYGE+FDRN+ Sbjct: 283 GVSSETVKAQQLESQNPEVRRL--LGSEGNLGGGLGLGPEWAYNILSQVGNYGEIFDRNI 340 Query: 315 GNQSELKIPRGYNALWS--KGGLMYAPPIR 342 G S LK+ RG NA W+ + GL+Y+PP+R Sbjct: 341 GADSPLKLSRGLNAQWNAPERGLLYSPPVR 370 >gi|319940740|ref|ZP_08015081.1| extracellular solute-binding protein, family 3 [Sutterella wadsworthensis 3_1_45B] gi|319805800|gb|EFW02574.1| extracellular solute-binding protein, family 3 [Sutterella wadsworthensis 3_1_45B] Length = 340 Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats. Identities = 144/342 (42%), Positives = 217/342 (63%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + S + ++L I+ L CG+NT GF+ + G W+G D Sbjct: 1 MKTTLLSAAVVAAAATAASPAFAGAVLDKIRANDQLVCGVNTSAPGFSSADSKGHWEGLD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ CR++++A+ + K++Y+PL++ + AL S QID+L+RNT WT+ R+ S G F Sbjct: 61 VNLCRSVAAAVLGNADKVKYVPLSSTQHMTALASGQIDMLARNTTWTMTRDASHGNVFVA 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 ++Y+DGQ F++ K G+ S+ +L GA++CVQ GTTTE T ADYF++H M+Y +VF+ E Sbjct: 121 VSYYDGQAFMVPKSLGVKSLKELDGATVCVQTGTTTEKTTADYFRSHGMQYKTVVFDTTE 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A+ + RCDAYT D+S L ++ PS+ ILP+ I+K PL PA+ +GD E++ I Sbjct: 181 ATQGAFLSGRCDAYTSDMSDLAGVRTVAQDPSKFDILPETITKEPLGPAVRRGDWEFFEI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V W+ A + AEELG+TQ N++ + K + +P+V R +G ++G LGL KDW+YRII Sbjct: 241 VRWSFMAFLNAEELGVTQANVDDMRKTSKDPNVMRLVGT--GEDMGRMLGLDKDWSYRII 298 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE + + G S L +PRG N LW+ GGLMYA PIR Sbjct: 299 KQVGNYGESWTKYFGPTSPLNLPRGMNKLWTDGGLMYAMPIR 340 >gi|269102822|ref|ZP_06155519.1| amino acid ABC transporter amino acid-binding protein [Photobacterium damselae subsp. damselae CIP 102761] gi|268162720|gb|EEZ41216.1| amino acid ABC transporter amino acid-binding protein [Photobacterium damselae subsp. damselae CIP 102761] Length = 342 Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats. Identities = 146/333 (43%), Positives = 220/333 (66%), Gaps = 3/333 (0%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 L L+ L F+ S +S L +KKRG++KCG++TGL+GF+E G W GFDV+FCRA+++ Sbjct: 13 LVLVALLFSYASVASSTLETVKKRGYIKCGVSTGLLGFSEPNQKGIWHGFDVEFCRAVAA 72 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 A+ D +++++PL AKERF ALQ+ +D+L+RNT WTL R+ SL + F ++Y+DGQGF Sbjct: 73 AVLKDKGQVKFIPLTAKERFFALQNNDVDLLARNTSWTLHRDTSLNVLFTGVSYYDGQGF 132 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 ++ I+ +++LS IC Q GTTTEL L++YF + I F+ ++ A+ Sbjct: 133 LVKTSANINKITELSNPRICFQTGTTTELNLSEYFAQIKQPFQSIPFDAKPQLVTAFEDD 192 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 RCD + D + LY++K + P IL +ISK PL P + D++W+NIV WT + ++ Sbjct: 193 RCDVISSDKAGLYSIKQSLKDPLSAHILVSVISKEPLGPVVRDNDSQWFNIVKWTLFTLL 252 Query: 250 TAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEM 309 AEE I+ +NI+ + KD++ P + RFL N+ E L L DW Y+II+ +GNYG++ Sbjct: 253 NAEENRISSENIDDL-KDSSIPHIARFLST--KDNLSEGLQLPLDWRYQIIKQVGNYGQI 309 Query: 310 FDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++R LG+ S+LK+ RG NALW GG+ YAPPIR Sbjct: 310 YERTLGHSSKLKMERGLNALWIDGGIQYAPPIR 342 >gi|91763314|ref|ZP_01265278.1| ABC transporter [Candidatus Pelagibacter ubique HTCC1002] gi|91717727|gb|EAS84378.1| ABC transporter [Candidatus Pelagibacter ubique HTCC1002] Length = 346 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 149/350 (42%), Positives = 220/350 (62%), Gaps = 12/350 (3%) Query: 1 MYK--DFFVSILCLIILFF-----TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M+K S++ ++ + F T + + L + +K+GF++CG++ GL GF+ A Sbjct: 1 MFKYVKQLTSLVAMVAVLFAFTTETMAAKKSKTLKNTQKKGFVRCGVSQGLPGFSNADAA 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+W G DVD CRA+++A+ D +K+++ PL+AKERF AL S +IDILSRNT WTL R+ Sbjct: 61 GNWTGVDVDVCRAVAAAVLGDANKVKFTPLSAKERFTALTSGEIDILSRNTTWTLSRDAD 120 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYH 172 +GL F + ++DGQGF++ K GI+S SQ G S C GTTTEL + D+F + + Y Sbjct: 121 IGLTFVGVNFYDGQGFMVRKDSGITSTSQFKNGISACTNIGTTTELNMRDFFNSKGISYE 180 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 P+ FE+ +E+ AAY + RCD YT D S L A + P +H++LP+ ISK PL P + Q Sbjct: 181 PVAFEKADEVVAAYDSGRCDTYTTDKSGLAAQRTKMTNPDDHIVLPETISKEPLGPVVRQ 240 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLT 292 GD W +IV W+ M+ AEE GI N + + K + NP ++R +G + +G A GL Sbjct: 241 GDAVWEDIVRWSLNVMIEAEEYGINSANAD-MMKTSENPQIKRLVGSEGE--LGAAFGLD 297 Query: 293 KDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 DW+ RII+ +GNYGE + RN+ + + RG N +W+KGGL+Y PP R Sbjct: 298 NDWSLRIIKQVGNYGESYKRNI-ADTGILPDRGPNQIWTKGGLLYVPPAR 346 >gi|296536584|ref|ZP_06898665.1| ABC superfamily ATP binding cassette transporter, amino acid binding protein [Roseomonas cervicalis ATCC 49957] gi|296263094|gb|EFH09638.1| ABC superfamily ATP binding cassette transporter, amino acid binding protein [Roseomonas cervicalis ATCC 49957] Length = 323 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 154/326 (47%), Positives = 221/326 (67%), Gaps = 7/326 (2%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 + A LG I+ RG + CG+ +GFA + G ++G D D+CRAL+ A+F D K Sbjct: 4 ATAQPAADTLGAIRARGHVLCGVTPNTIGFAAPDSQGVFRGLDADYCRALAVAVFGDADK 63 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 +++P A +RF ALQS ++D+L R T WTL RE +LG F + ++DG GF++ + G+ Sbjct: 64 ARFVPTTAPQRFPALQSGEVDVLIRTTTWTLSREAALGFVFAGVNFYDGNGFMVRRALGV 123 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 S QL GAS+C+Q G+TTEL + DYF+AH M+ +P+ +E VEEI A+ A RCD Y+ D Sbjct: 124 QSARQLDGASVCLQQGSTTELNVTDYFRAHGMRLNPVTYENVEEIRTAFAAGRCDVYSSD 183 Query: 198 ISALYALKL-TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 S L A + + V+LP+IISK PL PA+ +GD W++IV WTH+A++TAEELGI Sbjct: 184 TSTLAAFRAGQGAAADQFVLLPEIISKEPLGPAVRKGDARWFDIVRWTHFALLTAEELGI 243 Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316 TQ N+ + + D+T+PDVQRFLG +S ++G LGL DW RI+ +GN+GEM++RN+ Sbjct: 244 TQANLARFA-DSTSPDVQRFLG--RSGDLGRMLGLQPDWAARIVGQLGNFGEMWERNI-- 298 Query: 317 QSELKIPRGYNALWSKGGLMYAPPIR 342 + + I RG NALW++GGL YAPP+R Sbjct: 299 -TPMGIQRGINALWTQGGLQYAPPMR 323 >gi|254456453|ref|ZP_05069882.1| ABC transporter [Candidatus Pelagibacter sp. HTCC7211] gi|207083455|gb|EDZ60881.1| ABC transporter [Candidatus Pelagibacter sp. HTCC7211] Length = 346 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 151/350 (43%), Positives = 222/350 (63%), Gaps = 12/350 (3%) Query: 1 MYK--DFFVSILCLIILFFT-----SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M+K S++ ++ + FT + + L + +K+GF++CG++ GL GF+ A Sbjct: 1 MFKYLKQLTSLVAMVAVLFTFTTETMAAKKSKTLKNTQKKGFVRCGVSQGLPGFSNADAA 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+W G DVD CRA+++A+ D +K+++ PL+AKERF AL S +IDILSRNT WTL R+ Sbjct: 61 GNWTGVDVDVCRAVAAAVLGDANKVKFTPLSAKERFTALTSNEIDILSRNTTWTLSRDAD 120 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYH 172 +GL F + ++DGQGF++ K G SSV+ G S C GTTTEL + D+F + + Y Sbjct: 121 IGLTFVGVNFYDGQGFMVRKNSGYSSVNDFKNGISACTNLGTTTELNMRDFFNSKGISYE 180 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 P+ FE+ +E+ AAY A RCD YT D S L A ++ P +HV+LP+ ISK PL P + Q Sbjct: 181 PVTFEKADEVVAAYDAGRCDTYTTDKSGLAAQRIKLSSPDDHVVLPETISKEPLGPVVRQ 240 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLT 292 GD+ W +IV W+ M+ AEE G+ N + + K + NP V+R +G + +G ALGL Sbjct: 241 GDSVWEDIVRWSLNVMIEAEEYGVNSANADSM-KTSDNPAVKRLVGAEGE--LGAALGLD 297 Query: 293 KDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 DW+ RII+ +GNYGE + RN+ + + RG N LW+KGG++Y PP R Sbjct: 298 NDWSLRIIKQVGNYGESYKRNI-ADTGILPDRGPNELWTKGGILYVPPAR 346 >gi|39935694|ref|NP_947970.1| polar amino acid ABC transport substrate-binding protein AapJ-2 [Rhodopseudomonas palustris CGA009] gi|39649547|emb|CAE28069.1| polar amino acid ABC transport substrate-binding protein, aapJ-2 [Rhodopseudomonas palustris CGA009] Length = 340 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 142/319 (44%), Positives = 198/319 (62%), Gaps = 7/319 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 L IK RG +K G+ T G+ +NG W+GF VDF RAL+ +F DP K+Q+ Sbjct: 29 GPTLDRIKSRGVIKVGVGTT-PGYFAPDSNGRWQGFFVDFGRALAVTVFGDPDKVQFTSS 87 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 + ++R ALQS + D+L T+ R LG F P ++DGQG ++ K G++S SQL Sbjct: 88 SPQQRLPALQSGEFDVLLSGVTVTITRAFKLGFHFGPTIFYDGQGILVRKDLGVTSASQL 147 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 GA+I +Q+GTT EL +ADYF+ H K+ P+ E E AA + R D T D S L A Sbjct: 148 DGATIGIQSGTTGELNIADYFRKHRHKFTPVTIEDTSEFIAALDSGRVDGLTQDASDLAA 207 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 + +PS++VILP+ +SK PLAPA+ GD W IV+WT A + AEE GIT KN++ Sbjct: 208 KQTQLKKPSDYVILPERLSKEPLAPAVAGGDDRWLEIVTWTVNATIQAEEWGITSKNVDD 267 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 K + +P ++RFLG+D S + E++GL W Y II+ +GNYGE+FDR+L L Sbjct: 268 FLK-SDDPSIRRFLGVDPS--LAESIGLDPKWAYTIIKTVGNYGEIFDRHL---KPLGWE 321 Query: 324 RGYNALWSKGGLMYAPPIR 342 RGYN LW++GGL+Y+PP R Sbjct: 322 RGYNRLWTQGGLLYSPPFR 340 >gi|192291277|ref|YP_001991882.1| extracellular solute-binding protein family 3 [Rhodopseudomonas palustris TIE-1] gi|192285026|gb|ACF01407.1| extracellular solute-binding protein family 3 [Rhodopseudomonas palustris TIE-1] Length = 340 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 141/319 (44%), Positives = 197/319 (61%), Gaps = 7/319 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 L IK RG +K G+ T G+ +NG W+GF VDF RAL+ +F DP K+Q+ Sbjct: 29 GPTLDRIKSRGVIKVGVGTT-PGYFAPDSNGRWQGFFVDFGRALAVTVFGDPDKVQFTSS 87 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 + ++R ALQS + D+L T+ R LG F P ++DGQG ++ K G++S SQL Sbjct: 88 SPQQRLPALQSGEFDVLLSGVTVTITRAFKLGFHFGPTIFYDGQGILVRKDLGVTSASQL 147 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 GA+I +Q+GTT EL +ADYF+ H K+ P+ E E AA + R D T D S L A Sbjct: 148 DGATIGIQSGTTGELNIADYFRKHRHKFTPVTIEDTSEFIAALDSGRVDGLTQDASDLAA 207 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 + +P ++VILP+ +SK PLAPA+ GD W IV+WT A + AEE GIT KN++ Sbjct: 208 KQTQLKKPGDYVILPERLSKEPLAPAVAGGDDRWLEIVTWTVNATIQAEEWGITSKNVDD 267 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 K + +P ++RFLG+D S + E++GL W Y II+ +GNYGE+FDR+L L Sbjct: 268 FLK-SDDPSIRRFLGVDPS--LAESIGLDPKWAYTIIKTVGNYGEIFDRHL---KPLGWE 321 Query: 324 RGYNALWSKGGLMYAPPIR 342 RGYN LW++GGL+Y+PP R Sbjct: 322 RGYNRLWTQGGLLYSPPFR 340 >gi|82545639|ref|YP_409586.1| periplasmic binding transport protein [Shigella boydii Sb227] gi|81247050|gb|ABB67758.1| putative periplasmic binding transport protein [Shigella boydii Sb227] Length = 321 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 149/323 (46%), Positives = 218/323 (67%), Gaps = 18/323 (5%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDF----------------CRALSSAIFDDPSKIQ 79 ++CGI+ GL+GF+ A+G + G DVD CR++++A+F D +K++ Sbjct: 1 MQCGISDGLLGFSYADADGKFSGIDVDVDVDVDVDVDVDVDVDVCRSVAAAVFGDDTKVK 60 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 Y PL AKERF ALQS ++D+LSRNT WT R+ +G+AF +TY+DG GF+ H K G+ S Sbjct: 61 YTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKS 120 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R +E A + RCD D S Sbjct: 121 AKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQS 180 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 LYAL++ P+E ++LP++ISK PL P + +GD EW++IV WT +AM+ AEE+GI + Sbjct: 181 QLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQ 240 Query: 260 NINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSE 319 N+++ + + PD+ LG + + G+ L L W Y II+ +GNY E+F+RN+G++S Sbjct: 241 NVDEKAANPATPDMAHLLGKEG--DYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESP 298 Query: 320 LKIPRGYNALWSKGGLMYAPPIR 342 LKI RG N LW+ GG+ YAPP+R Sbjct: 299 LKIKRGQNNLWNNGGIQYAPPVR 321 >gi|33596740|ref|NP_884383.1| ABC transporter substrate-binding protein [Bordetella parapertussis 12822] gi|33573441|emb|CAE37426.1| Putative ABC transport system, substrate-binding protein [Bordetella parapertussis] Length = 336 Score = 391 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 147/342 (42%), Positives = 208/342 (60%), Gaps = 6/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ I T+ +A L D+K RG L C TG GF+ G G + Sbjct: 1 MKKTLTSPLVAAIA--HTAAPVHAGTLEDVKARGNLLCSSTTGSPGFSMPDDAGKRHGLE 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD CRA+++A+F DP + + + LN +RF ALQS ++DIL T WTL RE + L + Sbjct: 59 VDVCRAIATAVFGDPERHKIVVLNPIQRFTALQSGEVDILFNTTTWTLSREGAGAL-YAG 117 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DGQG ++ K I+S +L G +IC G+TTEL L D+F+A+ + I F V+ Sbjct: 118 VTYYDGQGVLVRKGT-IASAKELDGGAICTNQGSTTELNLVDFFRANKVSNEVITFATVQ 176 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E AY + RCDA++ D L AL+ P +HVIL D +SK PL A+ +GD W+++ Sbjct: 177 EAANAYESGRCDAWSADAGILAALRSKMKAPDDHVILADRLSKEPLGAAVRKGDDAWFSV 236 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V W+ +A+ AEELG+T KNI + +K TTNP+V RF+G + S +G+ LGL DW Y+I+ Sbjct: 237 VRWSIFALQAAEELGLTSKNIAEQAKSTTNPEVLRFVGKEGS--LGKVLGLNGDWAYQIV 294 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +G+Y E+FDRN+G S L + RG NA W GGL Y PP R Sbjct: 295 AQVGSYAEIFDRNIGAASPLNLERGINASWKNGGLFYTPPFR 336 >gi|326794954|ref|YP_004312774.1| ABC-type transporter periplasmic subunit family 3 [Marinomonas mediterranea MMB-1] gi|326545718|gb|ADZ90938.1| ABC-type transporter, periplasmic subunit family 3 [Marinomonas mediterranea MMB-1] Length = 343 Score = 391 bits (1004), Expect = e-106, Method: Composition-based stats. Identities = 137/345 (39%), Positives = 214/345 (62%), Gaps = 5/345 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + IL + S++ AS L ++K RG++ C I GF + G+W+G Sbjct: 1 MKKATSLLILASSMFSAASYAAETASTLDEVKSRGYMNCVIGNSFPGFYSLNKEGEWQGM 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D CR++S+A+F D SK+++LP+ + F +++S + D+LS+ WTL R+ GL F Sbjct: 61 DIDMCRSVSAAVFGDSSKVKFLPVQWAQSFTSIKSGKGDMLSKGMTWTLSRDTQQGLDFL 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 ++DGQGF++ K G+ SV L GA++CV GT++EL +AD+ +A+N+ +VF+ Sbjct: 121 DTYFYDGQGFMVRKDLGVDSVYDLEGATVCVLTGTSSELNIADFSRANNLDLKTVVFDDS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + A+ CDA T D S L A + P ++++LP+ ISK L+ A+ Q D+EW N Sbjct: 181 SVRNTAFFNDNCDALTNDKSGLAAQRSAAQNPDDYIVLPETISKEALSFAVKQNDSEWAN 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 +V WT AMV AEE GIT N++Q+ ++ +P V+R LG++ + N G LGL +DW Y++ Sbjct: 241 VVKWTFAAMVAAEEYGITSDNVDQMRSESNSPVVRRLLGVEGNLNTG--LGLPQDWAYQV 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPR--GYNALWSKGGLMYAPPIR 342 I+ +GNYGE+++RN+G S L + R NALW GG+MYA R Sbjct: 299 IKSVGNYGEVYERNVGPNSVLGLKREGTLNALWKDGGMMYAKSFR 343 >gi|317405314|gb|EFV85638.1| amino acid-binding periplasmic protein [Achromobacter xylosoxidans C54] Length = 341 Score = 390 bits (1003), Expect = e-106, Method: Composition-based stats. Identities = 142/323 (43%), Positives = 204/323 (63%), Gaps = 4/323 (1%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 S + IKKRG L CG++ G G + G W G D D CRAL++A+ DP K ++ Sbjct: 22 SMAGVTVDAIKKRGELVCGVSQGSAGLSIADKQGRWTGLDADLCRALAAAVLGDPEKTRF 81 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +PL++++RF ALQ +ID+L+RNT T R+ LG+ I ++DGQGF++ KK G+ S Sbjct: 82 VPLSSQQRFPALQGGEIDVLNRNTTITSSRDAGLGIVSAGIVFYDGQGFLVPKKLGVKSA 141 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 ++L GA +CVQ GT E L DYFK H + Y P+V E + E++ A+ A RCD Y D S Sbjct: 142 TELDGAQVCVQPGTVNEQNLVDYFKKHKLNYRPVVIENLVELEQAFYAGRCDVYLSDAST 201 Query: 201 L-YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L + P + VILP+ I+KSPL P + Q D W IV WT A+V AEELGIT + Sbjct: 202 LAASRAARAANPDDFVILPERINKSPLGPFVRQDDPNWTAIVRWTVNALVAAEELGITSR 261 Query: 260 NINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSE 319 N++ ++ +++ V+R LG+D IG+ GL + W +IR +GNYGE++DRNLG + Sbjct: 262 NVDSQAQ-SSDAQVRRLLGLDP--GIGKGFGLDEGWARNVIRAVGNYGEVWDRNLGAATP 318 Query: 320 LKIPRGYNALWSKGGLMYAPPIR 342 LK+ RG N W++GGL+Y+PP + Sbjct: 319 LKLDRGLNRQWNQGGLLYSPPFQ 341 >gi|83595863|gb|ABC25225.1| glutamate/glutamine/aspartate/asparagine-binding protein bztA precursor [uncultured marine bacterium Ant4D3] Length = 340 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 145/316 (45%), Positives = 204/316 (64%), Gaps = 3/316 (0%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 D++ G LKC + TGL GFA ANG W+GFD DFCRA+++A+ D K++++P K Sbjct: 27 EDVRAAGELKCVVTTGLAGFAAPDANGRWEGFDADFCRAVAAAVLGDGDKVKFVPSTGKT 86 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 RF L S + DIL RNT TL R++ L L+F P+ ++DGQGF++ G++S L GAS Sbjct: 87 RFTMLNSGEGDILFRNTTETLSRDVDLKLSFLPVNFYDGQGFMVPAALGVTSAMDLDGAS 146 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 +C+Q GTTTEL LADYF+A+ M Y P+ E EE Y A RCD YT D S L + + Sbjct: 147 VCIQTGTTTELNLADYFRANGMSYEPVPIETNEEGFTNYVAGRCDVYTTDASGLASTRAK 206 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 D P++HV+LP+IISK PL A+ GD +W++I W A++ AEE+G+TQ N ++ + Sbjct: 207 FDDPTQHVVLPEIISKEPLGGAVRHGDDQWHDIGKWVVNALINAEEMGVTQANAMNLAAN 266 Query: 268 -TTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGY 326 NP + R +G + S +G LGL W R + GNYGE+++RN+G + L+I RG Sbjct: 267 VGKNPGINRLVGSEGS--MGAMLGLDAKWAARAVAQGGNYGEIYERNVGPNTPLEIARGL 324 Query: 327 NALWSKGGLMYAPPIR 342 N LW+ GG++YA PIR Sbjct: 325 NNLWNNGGVLYAAPIR 340 >gi|167041376|gb|ABZ06129.1| putative bacterial extracellular solute-binding protein, family 3 [uncultured marine microorganism HF4000_005K23] Length = 348 Score = 388 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 149/346 (43%), Positives = 213/346 (61%), Gaps = 9/346 (2%) Query: 2 YKDFFVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 +K I + +LF A+ L + K+ LKCG++ GL GF+ + A G+W Sbjct: 7 FKHLLSLIAVVAVLFALGTEAMAAKKSKTLKNTIKKDTLKCGVSQGLPGFSNMDAAGNWT 66 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G DVD CRA+++A+ D K+ ++ L+AKERF AL + +IDILSRNT WTL R+ +GL Sbjct: 67 GVDVDVCRAVAAAVLGDSGKVTFIALSAKERFTALIAGEIDILSRNTTWTLSRDADIGLT 126 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F + ++DGQGF++ K GI+S + G S CV GTTTEL + D+F + + Y P+VF Sbjct: 127 FVGVNFYDGQGFMVRKDSGITSTNDFKSGLSACVNIGTTTELNMRDFFTSKGITYEPVVF 186 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E+ +E+ AY A RCD YT D S L A + P +H++LP+ ISK PL P + QGD Sbjct: 187 EKADEVKDAYDAGRCDTYTTDKSGLAAQRTKLANPDDHIVLPETISKEPLGPVVRQGDAV 246 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWT 296 W +IV W+ M+ AEE GI N + + K + NP ++R +G + +G ALGL DW+ Sbjct: 247 WEDIVRWSLNVMIEAEEYGINSANADSM-KTSKNPQIKRLVGAEGE--LGAALGLDNDWS 303 Query: 297 YRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 RII+ +GNYGE + RN+ + + RG N LW+KGGL+Y PP R Sbjct: 304 LRIIKQVGNYGESYKRNI-ADTGILPTRGPNELWTKGGLLYVPPAR 348 >gi|3182934|sp|Q52663|BZTA_RHOCA RecName: Full=Glutamate/glutamine/aspartate/asparagine-binding protein BztA; Flags: Precursor gi|1655712|gb|AAB17886.1| BztA [Rhodobacter capsulatus SB 1003] Length = 338 Score = 388 bits (996), Expect = e-106, Method: Composition-based stats. Identities = 154/342 (45%), Positives = 221/342 (64%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + + + + +AS L D+K RG L CG N GL GFA ANG ++GFD Sbjct: 1 MKKSVFFG--SVALAALVAGAASASTLDDVKARGQLICGSNPGLTGFAAPDANGVYQGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V C+A+++A+ DP K++Y+PL + RF AL S ++D+L RN+ WT R+ L L F Sbjct: 59 VAVCKAVAAAVLGDPMKVKYVPLTGETRFTALASGEVDVLVRNSTWTFSRDTELALDFVA 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF+++K G+SS +L GA+ICVQ GTTTE+ LAD+FKA+NM Y P+ Sbjct: 119 VNYYDGQGFMVNKSLGVSSAKELDGATICVQTGTTTEMNLADFFKANNMTYTPVNIADDA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + A CD+YT D S L + + T ++ VILP+IISK PL P + GD W +I Sbjct: 179 EGQQKFAAGACDSYTTDASGLASSRATLPNAADIVILPEIISKEPLGPVVRHGDNNWGDI 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V W+ YA+V AEE GIT+ N+ +V+ T NP+++R LG++ ++G+ +GL D+ R I Sbjct: 239 VRWSFYALVAAEEYGITKANLEEVAASTQNPEIRRLLGLEG--DMGKKIGLDNDFAKRAI 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F+ N+G + + + RG NA W++GGLMYAPP R Sbjct: 297 LASGNYGEVFEANIGASTSIGLARGLNAQWTQGGLMYAPPFR 338 >gi|227325810|ref|ZP_03829834.1| Extracellular solute-binding protein, family 3 precursor [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 350 Score = 387 bits (995), Expect = e-105, Method: Composition-based stats. Identities = 138/338 (40%), Positives = 208/338 (61%), Gaps = 4/338 (1%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 S+L + + + N L IK RG L CG++ GF+ + + G W G DVD+CR Sbjct: 16 LGSLLLPVAQATAADAGNGETLKKIKARGELVCGVHPARHGFSAIDSKGQWTGLDVDYCR 75 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 AL++AIF D +K+++ L+ +RF A+QS ++D+LSRN L R+ SLGL F P T++ Sbjct: 76 ALAAAIFGDANKVRFAALSTAQRFPAIQSGEVDVLSRNITADLSRDTSLGLNFAPPTFYT 135 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 G GF++ + V L GA++C+ G++TE +A F + N+ Y P+V E +E AA Sbjct: 136 GTGFMVRTSANVKKVEDLDGATVCITPGSSTERNVAQIFASRNLHYTPVVIENNKEYVAA 195 Query: 186 YRAHRCDAYTGDISALYALK-LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 Y + RCD D AL ++ ++PS+HVILP I SK PLA A+ QGD +WY+IV W Sbjct: 196 YLSGRCDVIARDKVALPGVRTFDAEKPSDHVILPGIYSKEPLAMAVRQGDDQWYDIVKWV 255 Query: 245 HYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMG 304 YA AEE+ I Q+N++ K +T+PD+Q LG+ + + G+ LGL W Y +I+ +G Sbjct: 256 VYATFNAEEMEIGQQNVDSKLK-STDPDIQALLGV--TGDYGQKLGLNNQWAYNLIKQVG 312 Query: 305 NYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 NYG++++R+ G + + R N LW+KGGL+Y PIR Sbjct: 313 NYGDIYNRHFGPDTPAPLERDLNNLWTKGGLLYGLPIR 350 >gi|294675892|ref|YP_003576507.1| glutamate/aspartate ABC transporter periplasmic glutamate/aspartate-binding protein BztA [Rhodobacter capsulatus SB 1003] gi|294474712|gb|ADE84100.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein BztA [Rhodobacter capsulatus SB 1003] Length = 338 Score = 386 bits (993), Expect = e-105, Method: Composition-based stats. Identities = 154/342 (45%), Positives = 221/342 (64%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + + + + +AS L D+K RG L CG N GL GFA ANG ++GFD Sbjct: 1 MKKSAFFG--SVALAALVAGAASASTLDDVKARGQLICGSNPGLTGFAAPDANGVYQGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V C+A+++A+ DP K++Y+PL + RF AL S ++D+L RN+ WT R+ L L F Sbjct: 59 VAVCKAVAAAVLGDPMKVKYVPLTGETRFTALASGEVDVLVRNSTWTFSRDTELALDFVA 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF+++K G+SS +L GA+ICVQ GTTTE+ LAD+FKA+NM Y P+ Sbjct: 119 VNYYDGQGFMVNKSLGVSSAKELDGATICVQTGTTTEMNLADFFKANNMTYTPVNIADDA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + A CD+YT D S L + + T ++ VILP+IISK PL P + GD W +I Sbjct: 179 EGQQKFAAGACDSYTTDASGLASSRATLPNAADIVILPEIISKEPLGPVVRHGDNNWGDI 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V W+ YA+V AEE GIT+ N+ +V+ T NP+++R LG++ ++G+ +GL D+ R I Sbjct: 239 VRWSFYALVAAEEYGITKANLEEVAASTQNPEIRRLLGLEG--DMGKKIGLDNDFAKRAI 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F+ N+G + + + RG NA W++GGLMYAPP R Sbjct: 297 LASGNYGEVFEANIGASTSIGLARGLNAQWTQGGLMYAPPFR 338 >gi|295689853|ref|YP_003593546.1| extracellular solute-binding protein family 3 [Caulobacter segnis ATCC 21756] gi|295431756|gb|ADG10928.1| extracellular solute-binding protein family 3 [Caulobacter segnis ATCC 21756] Length = 376 Score = 386 bits (991), Expect = e-105, Method: Composition-based stats. Identities = 143/319 (44%), Positives = 207/319 (64%), Gaps = 6/319 (1%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L ++ RG+L CG+ GL+GFA G W+GFD DFCRA ++AIF ++ P ++ Sbjct: 62 TLAAVRARGYLVCGVQQGLIGFAYADNTGRWRGFDTDFCRATAAAIFGRAEAARFTPTSS 121 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 ER LQ+ ++D+L RNT T R+ F + Y+DGQ F++ K G++ +QL+G Sbjct: 122 TERLTVLQAGEVDVLWRNTSATFSRDAK--FDFSGVNYYDGQAFLVRKALGVAHAAQLNG 179 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 A IC+Q G+T+E+ L DYF+AH + Y P+VF+ ++ AAY +CD YT D+S L A + Sbjct: 180 ARICIQTGSTSEMNLTDYFRAHKLTYEPVVFDTEDKARAAYGREQCDVYTADLSNLAAAR 239 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 T RP +H+ILP++ISK PL P + QGD W N+V WT AM+ AEELG+T N+ + Sbjct: 240 ATLARPGDHLILPEVISKEPLGPVVRQGDDAWGNVVRWTLNAMILAEELGVTSANVEALR 299 Query: 266 KDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRG 325 + NP+++R LG + G +GL+ D+ ++IIR +GNYGE+F RNLG + LKI RG Sbjct: 300 ARSDNPEIRRLLGAEP--GYGAMIGLSDDFAFQIIRQVGNYGEVFARNLGPATPLKIERG 357 Query: 326 YNALWSKG--GLMYAPPIR 342 NALW+ GL+YAPP+R Sbjct: 358 LNALWNASPPGLLYAPPMR 376 >gi|296448618|ref|ZP_06890487.1| extracellular solute-binding protein family 3 [Methylosinus trichosporium OB3b] gi|296253868|gb|EFH01026.1| extracellular solute-binding protein family 3 [Methylosinus trichosporium OB3b] Length = 351 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 148/338 (43%), Positives = 210/338 (62%), Gaps = 3/338 (0%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F +L L + + A+ LG + +RG L CG+ G GFA G+W G DVDFC Sbjct: 17 MFALLLPLAPARASGLAVRAATLGQVTERGRLLCGVGAGQPGFARQDEKGEWSGLDVDFC 76 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 RA+++AIFDDPS+ + L KER ALQ+ ++D+L+ WTL R+ G+AF +F Sbjct: 77 RAVAAAIFDDPSRASIVALTPKERLKALQTGEVDLLAHGAAWTLARDAGQGVAFVATLFF 136 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 DGQGF+ +K+ S L+G SICVQ GT+ EL L D +A + P +F EE Sbjct: 137 DGQGFLTARKRAAQSRRDLAGLSICVQQGTSFELDLVDGRRASDKPVEPRLFPSFEEAAE 196 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 AY +CDA T D+S L A + + P H IL ++I K PL P + QGD +W+++V WT Sbjct: 197 AYAQGQCDALTADLSTLAAERARLEAPDRHAILAELIDKEPLGPIVRQGDAQWFDVVRWT 256 Query: 245 HYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMG 304 ++AM+ AEELG+ N+++ K + +P +R LG++ E GL DW YRI++H+G Sbjct: 257 YFAMLDAEELGVASTNVDEALK-SADPRTRRLLGVEGGRV--EGFGLEPDWAYRIVKHVG 313 Query: 305 NYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 NYGE+F+RNLG+ S L + R NALW++GGLMYAPP+R Sbjct: 314 NYGEVFERNLGHGSPLGLDRRLNALWTEGGLMYAPPVR 351 >gi|27378020|ref|NP_769549.1| amino acid binding protein [Bradyrhizobium japonicum USDA 110] gi|27351166|dbj|BAC48174.1| bll2909 [Bradyrhizobium japonicum USDA 110] Length = 337 Score = 384 bits (987), Expect = e-104, Method: Composition-based stats. Identities = 144/318 (45%), Positives = 208/318 (65%), Gaps = 4/318 (1%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L +K RG L CG++ G GF+ + G++KG DVD+CRAL++ + D SK++Y+ L A Sbjct: 23 TLDTVKSRGTLVCGVSAGFAGFSAPDSQGNYKGLDVDYCRALAAGVLGDASKVRYVSLTA 82 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 + RF ALQS +ID+L RN+ T LR ++LGL PI ++DGQGF++ K G+ + L G Sbjct: 83 QNRFTALQSGEIDVLYRNSTQTYLRGVTLGLRQGPINFYDGQGFVVKKDLGVKDIKDLKG 142 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 A++CV GTT E+TL DY +A+ + + P+VF+RV+ + + RCDA T D SAL Sbjct: 143 ATVCVAQGTTHEVTLGDYGRANGIDWKPLVFDRVDTMYQTFFGGRCDAMTQDASALAGAV 202 Query: 206 LT-NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 T P+++V+LP ISK PL P GD W +I++W HY ++ AEELG+TQ N++++ Sbjct: 203 TTAAPNPADYVVLPQTISKEPLGPFTRNGDEVWSDIITWLHYGLIEAEELGVTQANVDEM 262 Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324 +K + P +QR LG S ++G LGL W I+ GNYGE+++RN+G S LK+ R Sbjct: 263 AK-SQTPAIQRLLGA--SGDLGSRLGLDNKWLVTAIKATGNYGEIYERNVGKASPLKLDR 319 Query: 325 GYNALWSKGGLMYAPPIR 342 G N LWSKGGLMYA P + Sbjct: 320 GLNGLWSKGGLMYAVPFK 337 >gi|317970283|ref|ZP_07971673.1| extracellular solute-binding protein [Synechococcus sp. CB0205] Length = 354 Score = 383 bits (985), Expect = e-104, Method: Composition-based stats. Identities = 136/351 (38%), Positives = 207/351 (58%), Gaps = 13/351 (3%) Query: 3 KDFFVSILCLIILFFTSFSTNAS-----ILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 + ++ L L T + S L +K RG L CG++ L GF+ V +G ++ Sbjct: 6 RKVLRALPLLAGLVLTGCAVEGSGPQSQKLAAVKARGQLVCGVDGKLPGFSFVAPDGRYQ 65 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG-- 115 GF+VD CRA+++ + DP+K+++ L+A ERF A+ S ++D+LSR+T TL R+ + G Sbjct: 66 GFEVDLCRAVAAGVLSDPAKVEFRDLSASERFAAVNSGEVDLLSRSTTMTLSRDAAGGNA 125 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 L+F PI ++ GQ +++ GI+ + QL+G ICV GTTTEL LAD + N Y P+ Sbjct: 126 LSFAPIHFYGGQAVMVNAGSGITYLKQLAGKPICVTTGTTTELNLADRMRELNAAYMPLK 185 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F+ + AY RC A T D + L A + + P HV+L +SK PLA + GD Sbjct: 186 FQNDGQTYGAYLQGRCVAVTSDRALLAAKRSSFPDPKAHVLLAGDLSKEPLAMGTVNGDP 245 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNIN----QVSKDTTNPDVQRFLGIDKSSNIGEALGL 291 W + V W YA++ AEE GITQ N+ + D+ D++RFLG+D +G+ LGL Sbjct: 246 AWADAVRWIAYALMQAEESGITQANVEAKLAEAQADSNQADLRRFLGVDGQ--LGQQLGL 303 Query: 292 TKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 D+ ++I+ +GNYGE+F+RNLG + + + RG N W+ GGL+Y+PP R Sbjct: 304 PADFVVQVIKAVGNYGEIFERNLGVNTRINLERGTNRQWTDGGLIYSPPFR 354 >gi|126731935|ref|ZP_01747738.1| ABC transporter amino acid-binding protein [Sagittula stellata E-37] gi|126707467|gb|EBA06530.1| ABC transporter amino acid-binding protein [Sagittula stellata E-37] Length = 337 Score = 383 bits (983), Expect = e-104, Method: Composition-based stats. Identities = 146/316 (46%), Positives = 208/316 (65%), Gaps = 2/316 (0%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L D+K G LKCG++ GL GF+ G+W G DVD+CRAL++A+ D ++Y+ L+AK Sbjct: 24 LDDVKAAGSLKCGVSQGLPGFSATNDAGEWTGIDVDYCRALAAAVLGDADAVEYVSLSAK 83 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 +RF AL S +ID+LSRNT WT+ R+ LG+ F + Y+DGQG ++ GI+S +L GA Sbjct: 84 DRFTALSSGEIDVLSRNTTWTITRDTDLGITFVGVNYYDGQGMMVPAGLGITSALELDGA 143 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 +IC GTTTEL + DYF H+M + + E +E+ AAY A RCD +T D S + A +L Sbjct: 144 TICTNTGTTTELNITDYFTQHDMSFELVALENSDEVIAAYGAGRCDVFTTDRSGVAAERL 203 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 P HV+LP+ ISK PL P++ GD +W + W ++ AEE GIT +N++++ + Sbjct: 204 KLADPDAHVVLPETISKEPLGPSVRAGDEQWMKVAKWVLNGVIEAEEYGITSENVDEMLE 263 Query: 267 DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGY 326 + NP VQR LG ++ G LGL D+ Y+ ++ +GNYGEM+DRN+G + LK+ RG Sbjct: 264 -SENPSVQRILGA-GDNDYGAPLGLGADFVYQAVKQVGNYGEMYDRNVGPDTPLKLERGV 321 Query: 327 NALWSKGGLMYAPPIR 342 N LW+KGG MYAPPIR Sbjct: 322 NNLWNKGGFMYAPPIR 337 >gi|253690349|ref|YP_003019539.1| extracellular solute-binding protein family 3 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251756927|gb|ACT15003.1| extracellular solute-binding protein family 3 [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 350 Score = 383 bits (983), Expect = e-104, Method: Composition-based stats. Identities = 134/326 (41%), Positives = 204/326 (62%), Gaps = 4/326 (1%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 + + N L IK RG L CG++ GF+ + + G W G DVD+CRAL++A+F D +K Sbjct: 28 AADAGNGETLKKIKARGELVCGVHPARHGFSAIDSKGQWTGLDVDYCRALAAAVFGDANK 87 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 +++ L+ +RF A+QS ++D+LSRN L R+ SLGL F P T++ G GF++ + Sbjct: 88 VRFAALSTAQRFPAIQSGEVDVLSRNITADLSRDTSLGLNFAPPTFYTGTGFMVRTSANV 147 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 V L GA++C+ G++TE +A F + N+ Y P+V E +E AAY + RCD D Sbjct: 148 KKVEDLDGATVCITPGSSTERNVAQIFASRNLHYTPVVIENNKEYVAAYLSGRCDVIARD 207 Query: 198 ISALYALK-LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 AL ++ ++PS+HVILP I SK PLA A+ QGD +WY+IV W YA AEE+ I Sbjct: 208 KVALPGVRTFDAEKPSDHVILPGIYSKEPLAMAVRQGDDQWYDIVKWVVYATFNAEEMEI 267 Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316 Q+N++ K +T+PD+Q LG+ + + G+ LGL+ W Y +I+ +GNY ++++R+ G Sbjct: 268 GQQNVDSKLK-STDPDIQALLGV--TGDYGQKLGLSNQWAYNVIKQVGNYSDIYNRHFGP 324 Query: 317 QSELKIPRGYNALWSKGGLMYAPPIR 342 + + R N LW+KGGL+Y PIR Sbjct: 325 DTPAPLERDLNNLWTKGGLLYGLPIR 350 >gi|149925439|ref|ZP_01913703.1| probable amino acid-binding protein [Limnobacter sp. MED105] gi|149825556|gb|EDM84764.1| probable amino acid-binding protein [Limnobacter sp. MED105] Length = 343 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 153/333 (45%), Positives = 227/333 (68%), Gaps = 4/333 (1%) Query: 11 CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70 L L + + +L I KR ++CG+++G+ GF+ + ++G W+G DV CRA+++A Sbjct: 14 TLFCLLVANTAQAGPVLDAIYKRDAVRCGVSSGVAGFSALGSDGQWRGLDVAVCRAVAAA 73 Query: 71 IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130 + D K+Q+ PL++++RF ALQ+ QIDILSRNT WTL R+ L F ITY+DGQG + Sbjct: 74 VLGDAQKVQFTPLSSQQRFAALQAGQIDILSRNTTWTLGRDAGLNAHFAAITYYDGQGIL 133 Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190 MHK+ G+ S +L GA ICVQ+GTT E L+ Y + + IV++ E A+ + R Sbjct: 134 MHKRFGVKSAKELKGAEICVQSGTTNEKNLSTYLGSQGITAKAIVYDNFEAAYKAFFSGR 193 Query: 191 CDAYTGDISALYALK-LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 C A++ D+SAL LK + RP ++V+LP++ SK PL PA+++GD E++ IV W +AM+ Sbjct: 194 CQAFSTDVSALIGLKSSQSGRPDDYVVLPEVFSKEPLGPAVLRGDDEFFAIVKWVVFAMI 253 Query: 250 TAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEM 309 AEELG+ + NI Q +++NP VQR LG + N+G+ LGL +DW +I++ +GNYGE+ Sbjct: 254 EAEELGVGKGNIEQAL-NSSNPAVQRLLG--GAENLGKPLGLPRDWVVKILQQVGNYGEV 310 Query: 310 FDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 F+ NLG QS LK+ RG NALW++GGLMYAPP+R Sbjct: 311 FEENLGKQSPLKLERGLNALWTQGGLMYAPPLR 343 >gi|261823404|ref|YP_003261510.1| extracellular solute-binding protein family 3 [Pectobacterium wasabiae WPP163] gi|261607417|gb|ACX89903.1| extracellular solute-binding protein family 3 [Pectobacterium wasabiae WPP163] Length = 350 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 137/326 (42%), Positives = 204/326 (62%), Gaps = 4/326 (1%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 + + N L IK RG L CG++ GF+ + + G W G DVD+CRAL++AIF D SK Sbjct: 28 AADAGNGETLKKIKARGELVCGVHPARHGFSAIDSKGQWTGLDVDYCRALAAAIFGDASK 87 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 +++ L+ +RF A+QS ++D+LSRN L R+ SLGL F P T++ G GF++ + Sbjct: 88 VRFAALSTAQRFPAIQSGEVDVLSRNITADLSRDTSLGLNFAPPTFYTGTGFMVRTSANV 147 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 +V L GA++C+ G++TE +A F + N+ Y P+V E +E AAY + RCD D Sbjct: 148 KTVEDLDGATVCITPGSSTERNVAQIFASRNLHYTPVVIENNKEYVAAYLSGRCDVIARD 207 Query: 198 ISALYALK-LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 AL ++ ++P++HVILP I SK PLA A+ QGD +WY+IV W YA AEE+ I Sbjct: 208 KVALPGVRTFDAEKPADHVILPGIYSKEPLAMAVRQGDDQWYDIVKWVVYATFNAEEMEI 267 Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316 Q+N++ K +T+PDVQ LG + + G+ LGL W Y +I+ +GNYG++++R+ G Sbjct: 268 GQQNVDSKLK-STDPDVQALLGT--TGDYGQKLGLNNQWAYNLIKQVGNYGDIYNRHFGP 324 Query: 317 QSELKIPRGYNALWSKGGLMYAPPIR 342 + + R N LW+KGGL+Y PIR Sbjct: 325 DTPAPLERDLNNLWTKGGLLYGLPIR 350 >gi|331005342|ref|ZP_08328727.1| amino acid ABC transporter, periplasmic amino acid-binding protein [gamma proteobacterium IMCC1989] gi|330420839|gb|EGG95120.1| amino acid ABC transporter, periplasmic amino acid-binding protein [gamma proteobacterium IMCC1989] Length = 336 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 143/336 (42%), Positives = 217/336 (64%), Gaps = 3/336 (0%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 + + + +LF + A L D+++RGF+ CG++ GL GF++ G W G DVD CR Sbjct: 3 LLKTIIVGVLFLAALGVKAGTLEDVRERGFVSCGVSDGLTGFSQKNDKGVWSGLDVDVCR 62 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 A+++A+F D K+ Y PL AKERF+ALQS ++D+LSRNT WTL R++++GL F I Y+D Sbjct: 63 AVAAAVFSDADKVAYKPLTAKERFVALQSNEVDLLSRNTTWTLTRDVAMGLKFAGINYYD 122 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 GQGF++ ++ G+SS +L GAS CVQAG+T+E+ + +F +NM Y +F++ ++ Sbjct: 123 GQGFLVSQELGVSSAFELDGASFCVQAGSTSEVGIEIFFNNNNMTYKRRIFDKSSDVRDG 182 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 CD + D S LY+ + P V+LP++ISK PL P + QGD W+NIV W+ Sbjct: 183 LDKGMCDVISSDQSQLYSFRTGLMNPESFVVLPEVISKEPLGPVVRQGDDTWFNIVRWSL 242 Query: 246 YAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGN 305 AM+ AE LGIT N++ + + + +R LG + + + L+ DW Y II+ +GN Sbjct: 243 VAMIEAEFLGITSLNVD-ILRKSGELGQKRLLGSEGELSTNSS--LSADWAYNIIKQVGN 299 Query: 306 YGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341 Y E F+RN+G++S LKI RG NA W+ GG++Y+PPI Sbjct: 300 YSESFERNVGSESTLKIARGLNAQWNAGGILYSPPI 335 >gi|163793102|ref|ZP_02187078.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [alpha proteobacterium BAL199] gi|159181748|gb|EDP66260.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [alpha proteobacterium BAL199] Length = 346 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 137/325 (42%), Positives = 200/325 (61%), Gaps = 4/325 (1%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 S S L +K RG L+C + T G+ + G W GFD + CRA+S+AIF DP KI+ Sbjct: 24 ASAQQSTLDIVKSRGHLRCQLGTPAPGWYMLSDTGKWSGFDYENCRAVSAAIFGDPDKIE 83 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 + + RF A+ + + D+LSR T WTL RE LGL F ++++DGQGF++ K GI S Sbjct: 84 VQSVTSAVRFTAMANGESDMLSRTTTWTLFRETQLGLDFTTVSFYDGQGFMVLKDAGIKS 143 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 +L GA++CV GTTTEL L DY + + + P+VFE D + CDA T D S Sbjct: 144 ALELKGATVCVATGTTTELNLTDYSRTNGLDIKPVVFEDSNVRDNTFFTGGCDAITNDKS 203 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 +L + + S ILP+ ISK PL P + Q D++W +IV W+ Y M+ AEE G++ Sbjct: 204 SLASTRAKAPDVSIFKILPETISKEPLGPVVRQNDSQWKDIVQWSVYTMIAAEEYGMSST 263 Query: 260 NINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSE 319 N+++V +TTNP+++R LG + ++ + LGL W Y II+ +GNYGE ++ +G ++ Sbjct: 264 NVDKVLAETTNPEIKRMLGAEG--DLNKGLGLEPKWAYNIIKMVGNYGENYEEFMGEKTV 321 Query: 320 LKIPR--GYNALWSKGGLMYAPPIR 342 + IPR NALW+KGGL+Y+PP R Sbjct: 322 MNIPRDGSPNALWTKGGLLYSPPFR 346 >gi|297567745|ref|YP_003686716.1| hypothetical protein Mesil_3397 [Meiothermus silvanus DSM 9946] gi|296852194|gb|ADH65208.1| hypothetical protein Mesil_3397 [Meiothermus silvanus DSM 9946] Length = 345 Score = 381 bits (979), Expect = e-104, Method: Composition-based stats. Identities = 139/344 (40%), Positives = 215/344 (62%), Gaps = 8/344 (2%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDV 61 + + + + + S L +K RG L CG+N L GF + G GFDV Sbjct: 6 RKPLLLVAVVAYVLTGMGLAQQSRLDVVKGRGKLVCGVNARLPGFGFLDEKTGKATGFDV 65 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 DFCRA+++A+FDDP K++Y+PL+A+ RF A+Q+ ++D+ RNT T R+ ++G+ F P+ Sbjct: 66 DFCRAVAAALFDDPEKVEYVPLDARVRFQAVQNGEVDVAFRNTTVTSSRDGAVGVDFLPV 125 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH-PIVFERVE 180 T++DGQG ++ K K SS+ +L GA+ C GTT E ++DY ++ + + FE + Sbjct: 126 TFYDGQGVMVKKGKA-SSLRELEGATFCTTQGTTNEKNISDYIRSRRWRNTRLLTFEDGQ 184 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 ++ AA RCDA+T D S L + T P + +IL + ISK PLA + + D+ W + Sbjct: 185 KVFAALLEGRCDAFTADKSQLVGYRGTASNPDDLLILRETISKEPLAGMVRENDSRWRDA 244 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 ++W YA + AEE GIT KN++Q +K + P+V+RFLG++ + +G+ LGL D+ RI+ Sbjct: 245 LTWIVYATIQAEEFGITVKNLDQQTK-SDVPEVRRFLGLEGT--LGKDLGLPPDFAVRIV 301 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRG--YNALWSKGGLMYAPPIR 342 RH+GNYGE++DR G +S IPR NAL++KGGL+Y+PP R Sbjct: 302 RHVGNYGEIYDRYFGPKSAFAIPRAGTLNALYNKGGLLYSPPFR 345 >gi|302383029|ref|YP_003818852.1| extracellular solute-binding protein family 3 [Brevundimonas subvibrioides ATCC 15264] gi|302193657|gb|ADL01229.1| extracellular solute-binding protein family 3 [Brevundimonas subvibrioides ATCC 15264] Length = 370 Score = 380 bits (976), Expect = e-103, Method: Composition-based stats. Identities = 144/321 (44%), Positives = 212/321 (66%), Gaps = 4/321 (1%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + L IK+RG L CG+N GLVGFA G+W+GFDVDFCR L++A+ DP ++++PL Sbjct: 52 SPTLVAIKRRGRLNCGVNQGLVGFAYTDNRGEWRGFDVDFCRGLAAAVVGDPDAVRFVPL 111 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 +A+ RF AL+ ++D+L RNT WT+ R+ L+F I Y+DGQGF++ + ++S ++L Sbjct: 112 SAENRFQALEDGRVDVLWRNTSWTMERDTGGRLSFAGINYYDGQGFLVRRALNLNSAAEL 171 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 +GA IC+Q+G+T+ L + DYF++ ++Y +V E AY CDA++ D+SAL A Sbjct: 172 NGARICLQSGSTSALNVEDYFRSRGIEYRAVVLPTEEAARQAYGREDCDAFSADVSALAA 231 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 + T S+HVILPD+ISK PL P + +GD +W IV WT A+V AEELG+TQ N+ Sbjct: 232 ARTTLGDSSQHVILPDVISKEPLGPVVRRGDEQWTAIVRWTQNALVLAEELGVTQANVED 291 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 + + +P V+R LG++ G +GL+ DW I +GNYGE+F+RNLG+QS L + Sbjct: 292 QAAEARDPQVRRLLGVEGE--FGSRMGLSDDWARDAIAGVGNYGEIFERNLGSQSALDLA 349 Query: 324 RGYNALWS--KGGLMYAPPIR 342 RG NA W+ GL+Y P+R Sbjct: 350 RGLNAQWNGRPAGLIYGLPVR 370 >gi|163742834|ref|ZP_02150218.1| predicted amino-acid transporter subunit [Phaeobacter gallaeciensis 2.10] gi|161383798|gb|EDQ08183.1| predicted amino-acid transporter subunit [Phaeobacter gallaeciensis 2.10] Length = 347 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 141/349 (40%), Positives = 210/349 (60%), Gaps = 10/349 (2%) Query: 2 YKDFFVSILCLII----LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 K+ F + C + L + + S L +K RG L C + GF ++ +GDW+ Sbjct: 1 MKNLFSMLSCAAMAAGGLSIAAPAAAQSTLETVKTRGHLNCQVGPPRAGFYQLLESGDWE 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G DV CRA+++AIF DP+K+++ ++A RF +L + + D+LSR WT+ R+ +LG+ Sbjct: 61 GSDVAVCRAMAAAIFGDPNKVEFQSVSASVRFTSLANGESDVLSRTATWTVGRDAALGID 120 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F + DGQGF++ K GI S L+GA++CV G T+E TL D+ +A+N+ + F+ Sbjct: 121 FTAPVFHDGQGFLVRKDSGIKSAFDLTGATVCVITGHTSEATLQDFSRANNLDIQAVAFD 180 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 ++ Y CDA T D L + PSEHV+LP+I+SK PL PA+ GD +W Sbjct: 181 DSAIVNETYLNGGCDAITTDKGVLASEARGFPDPSEHVVLPEILSKEPLTPAVRNGDNQW 240 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297 +IV WT +A++ AEELGITQ N+ +++ + NP V RFLG + N G LGL KDW Sbjct: 241 GDIVQWTVFALINAEELGITQANVEEIAANPPNPLVARFLGAEGELNTG--LGLPKDWVV 298 Query: 298 RIIRHMGNYGEMFDRNLGNQSE--LKIPR--GYNALWSKGGLMYAPPIR 342 I+ +GNYGE+++ LG+ L IPR NALW++GGLM++PP R Sbjct: 299 HAIKAVGNYGEIYEHYLGDGRPEALGIPRAGSANALWTEGGLMFSPPFR 347 >gi|254432874|ref|ZP_05046577.1| polar amino acid transport system substrate-binding proetin [Cyanobium sp. PCC 7001] gi|197627327|gb|EDY39886.1| polar amino acid transport system substrate-binding proetin [Cyanobium sp. PCC 7001] Length = 344 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 143/346 (41%), Positives = 214/346 (61%), Gaps = 12/346 (3%) Query: 7 VSILCLIILFFTSFST----NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 +++L LI L + ++ L I R L CG+ L GF+ V+ +G + G DVD Sbjct: 1 MALLGLIPLAACAPPDGSGLQSAKLNGITARDKLVCGVEGTLPGFSFVEPDGRYSGLDVD 60 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS--LGLAFRP 120 C+A+++A+ DP K++Y LN+ ERF AL S ++D+L+RNT TL R+ + GL+F P Sbjct: 61 TCKAVAAAVLGDPDKVEYRNLNSSERFAALASGEVDMLARNTTATLSRDAAGGNGLSFAP 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 T++DGQG + K GI+ + LSG +ICV++GTTTEL LAD + ++ Y P+ F+ + Sbjct: 121 TTFYDGQGVMAPVKSGITDLKGLSGKAICVESGTTTELNLADRMREIDVPYTPLKFQTSD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + AAY RC A T D S L + + P +H +LPD++SK PL+PA D W + Sbjct: 181 QTYAAYLGGRCAAVTSDRSQLAGKRSSFPAPDDHQLLPDVLSKEPLSPATTNADPAWADA 240 Query: 241 VSWTHYAMVTAEELGITQKNIN----QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWT 296 + W ++++ AEE GITQ N++ + +T D++RF G++ + G LGL D+T Sbjct: 241 LRWIVFSLMQAEEWGITQANLDSKLAEAQANTNLADLRRFFGVEG--DFGRQLGLPADFT 298 Query: 297 YRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 R IR +GNYGE+F+RN+G S LK+ RG N LWS+GGL+YA P R Sbjct: 299 VRAIRAVGNYGEIFERNVGTTSRLKLERGLNRLWSEGGLIYAQPFR 344 >gi|152994191|ref|YP_001339026.1| extracellular solute-binding protein [Marinomonas sp. MWYL1] gi|150835115|gb|ABR69091.1| extracellular solute-binding protein family 3 [Marinomonas sp. MWYL1] Length = 343 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 132/325 (40%), Positives = 209/325 (64%), Gaps = 4/325 (1%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 + S L +K+RG++ C I GF + G+W+G D+D CR ++SA+F D SK++ Sbjct: 21 AADTTSTLDAVKERGYVNCVIGNSFPGFYSLNKAGEWQGMDIDMCRGVASAVFGDASKVK 80 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +LP+ + F +++S + DILS+ WTL R+ + GL F ++DGQGF++ K G+ S Sbjct: 81 FLPVQWAQSFTSIKSGKGDILSKGMTWTLSRDSAQGLDFLDTYFYDGQGFMVRKDLGVKS 140 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 V +L+GA++CV GT++EL +ADY +A+N+ +VF+ + A+ + CDA T D S Sbjct: 141 VKELNGATVCVLTGTSSELNIADYSRANNLDIKTVVFDDSSVRNTAFFNNNCDALTNDKS 200 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L A + P+++VILP+ ISK L+ A+ Q D+EW N+V WT AMV AEE G+ + Sbjct: 201 GLAAQRSAAPNPNDYVILPETISKEALSFAVKQNDSEWANVVKWTFAAMVAAEEFGVNSQ 260 Query: 260 NINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSE 319 N+ ++ ++ +P V+R LG++ N G LGL +DW +++I+++GNYGE+++RN+G S Sbjct: 261 NVEKMRAESQSPVVRRLLGVEGDLNTG--LGLPQDWAFQVIKNVGNYGEVYERNVGTDSV 318 Query: 320 LKIPR--GYNALWSKGGLMYAPPIR 342 L + R N LW+KGGLMYA R Sbjct: 319 LGLDREGTLNELWTKGGLMYAKSFR 343 >gi|261752067|ref|ZP_05995776.1| cationic amino acid ABC transporter [Brucella suis bv. 5 str. 513] gi|261741820|gb|EEY29746.1| cationic amino acid ABC transporter [Brucella suis bv. 5 str. 513] Length = 277 Score = 378 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 155/273 (56%), Positives = 206/273 (75%), Gaps = 3/273 (1%) Query: 72 FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131 F DP+K+++ PLNAKERF ALQS ++D+L RNT WT+ R+ SLGL F I Y+DGQGF++ Sbjct: 6 FGDPTKVKFTPLNAKERFTALQSGEVDVLIRNTTWTISRDTSLGLDFAGINYYDGQGFMI 65 Query: 132 HKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 + KK GI+S QLSGASICVQAGTTTEL +ADYF+A+ M+Y+P+VFE++EE +AAY + Sbjct: 66 NSKKLAGINSALQLSGASICVQAGTTTELNMADYFRANKMEYNPVVFEKIEEANAAYDSG 125 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 RCDAYT D S+LY ++L P +HVILP+IISK P + QGD W ++V WTH A++ Sbjct: 126 RCDAYTTDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDARWADVVRWTHNALL 185 Query: 250 TAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEM 309 AEE GITQ N+ ++ K + NPD++R LG + + IG LGL KDW +II+ +GNYGE+ Sbjct: 186 NAEEYGITQANVEEMKK-SDNPDIKRLLGAEADTKIGTDLGLDKDWVVKIIKGVGNYGEI 244 Query: 310 FDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 F+RN+G+ S LKI RG NA W+KGGL Y P+R Sbjct: 245 FERNIGSGSPLKIARGLNAQWNKGGLQYGIPVR 277 >gi|87120913|ref|ZP_01076805.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Marinomonas sp. MED121] gi|86163751|gb|EAQ65024.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Marinomonas sp. MED121] Length = 325 Score = 378 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 138/325 (42%), Positives = 206/325 (63%), Gaps = 2/325 (0%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 + A L D+KKRGFL+CG GFA N W+G ++D+C+ALSSA+F D +K Sbjct: 3 ATAPVFADTLDDVKKRGFLRCGTGEAKAGFAMPGDNNQWQGMEIDYCKALSSAVFGDETK 62 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 + +P+ +K RF +L S++ID+L + T WT R+ LG+ F +FDGQGF++ K+ G+ Sbjct: 63 FEVVPVTSKVRFTSLTSREIDVLVKGTTWTYSRDAKLGVDFAAYWFFDGQGFLIKKELGV 122 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 +S QL+GA+IC+ GTT+E +AD+F+ ++MKY P+V + E A + RCD T D Sbjct: 123 TSAKQLNGATICISPGTTSEKNVADFFRTYDMKYKPVVIKAGPETLDALQKGRCDVITND 182 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 +SAL + + P + V+L D I+K PL+ + Q D+ W ++++WT A+V AEELGIT Sbjct: 183 LSALASDRQKFTNPDDFVVLQDNIAKEPLSLYVRQNDSRWKDVITWTRNALVEAEELGIT 242 Query: 258 QKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQ 317 Q+N+ Q +K +P V R LG + GE LGL W + I +GNYGE+F+RN+G Q Sbjct: 243 QENVGQHAKHPIDPRVARLLGAKGA--YGEMLGLPNTWAHDAISAVGNYGEIFERNVGEQ 300 Query: 318 SELKIPRGYNALWSKGGLMYAPPIR 342 + + + R N W GGL++APP R Sbjct: 301 TRMGLTRNLNQQWYDGGLVFAPPFR 325 >gi|197105093|ref|YP_002130470.1| lysine-arginine-ornithine-binding periplasmic protein [Phenylobacterium zucineum HLK1] gi|196478513|gb|ACG78041.1| lysine-arginine-ornithine-binding periplasmic protein [Phenylobacterium zucineum HLK1] Length = 337 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 146/324 (45%), Positives = 221/324 (68%), Gaps = 4/324 (1%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 +T + L +++RG + CG++ GL GFA A G W+GFDVD CRA+++A+F D ++++ Sbjct: 16 ATPSPTLEAVRRRGRVTCGVHPGLPGFAMRDARGIWRGFDVDVCRAVAAAVFGDAERVRF 75 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +P++ +RF L++++IDILSRNT TL R+ LGL F TY+DGQGF++ + G++S Sbjct: 76 VPIDGSDRFRELRAERIDILSRNTSLTLSRDAGLGLTFPATTYYDGQGFLVARALGVASA 135 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 +L GA +CVQAGT +E LAD+F+A + Y P++ + E+ Y + CD ++ DIS Sbjct: 136 EELGGARVCVQAGTASETNLADFFRARGLDYQPVLAKSEEDARRLYESDGCDVFSADISG 195 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L A + P+ HVILP++ISK PL P + Q D W +IV+WT +A+V AEELG++ + Sbjct: 196 LAASRSLLSNPNGHVILPNVISKEPLGPVVRQDDPAWADIVAWTVHAIVLAEELGLSSRT 255 Query: 261 INQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSEL 320 + Q + T+P+ +R LG++ N+GE LG+ +DW Y++IR +G Y E+F R+LG S L Sbjct: 256 VEQARETATDPETRRLLGVEG--NLGELLGVRRDWAYQVIRQVGAYHEIFRRDLGADSAL 313 Query: 321 KIPRGYNALWS--KGGLMYAPPIR 342 K+ RG NALW+ K GLMYAPP+R Sbjct: 314 KLERGLNALWTAPKPGLMYAPPVR 337 >gi|126731767|ref|ZP_01747571.1| Lysine-arginine-ornithine-binding periplasmic protein [Sagittula stellata E-37] gi|126707594|gb|EBA06656.1| Lysine-arginine-ornithine-binding periplasmic protein [Sagittula stellata E-37] Length = 344 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 136/321 (42%), Positives = 205/321 (63%), Gaps = 4/321 (1%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 + L IK RG L CG++ GFA + G+W G +VD+C AL++A+F D K++++ Sbjct: 27 SGDTLASIKSRGELLCGVHPARHGFAAPDSQGNWAGLEVDYCHALAAAVFGDADKVRFVA 86 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 L++++RF A+QS ++D+L RN TL R+ +LGL F P ++ G GF++H G+ +V Sbjct: 87 LSSQQRFPAIQSGEVDVLVRNVTATLGRDTALGLNFAPPIFYTGTGFLVHAGSGVETVED 146 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L GA+ICV G+TTE +A F + M+Y P+V E +++ AY RCDA T D +AL Sbjct: 147 LDGATICVAPGSTTERNVAQIFASRGMEYTPVVIENNKQLVDAYVTGRCDALTKDKAALP 206 Query: 203 ALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 ++ + P EHV+LP I SK PLAPA+ QGD +WY+IV W YA AEELG+T +N Sbjct: 207 GVRAYDTTDPKEHVLLPGIFSKEPLAPAVRQGDDQWYDIVKWVVYATFNAEELGVTSENA 266 Query: 262 NQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELK 321 ++ +++ + DV LG + + G LGLT+DW Y +I +GNYGE++DR+ G S ++ Sbjct: 267 EEM-RNSDDVDVMSLLGT--TGDYGSKLGLTEDWAYDVITQVGNYGEIYDRHFGPDSPVQ 323 Query: 322 IPRGYNALWSKGGLMYAPPIR 342 + R N W+ GGL+Y PI+ Sbjct: 324 LDRDLNKQWTDGGLLYGFPIK 344 >gi|114771237|ref|ZP_01448657.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [alpha proteobacterium HTCC2255] gi|114548162|gb|EAU51049.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [alpha proteobacterium HTCC2255] Length = 339 Score = 378 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 148/343 (43%), Positives = 211/343 (61%), Gaps = 5/343 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + F + A L D++ G LKCG+ TGL GFA ANG W GFD Sbjct: 1 MKKSAFFG--TIAAATFAAGFAAAGTLEDVQAAGELKCGVTTGLAGFALADANGVWDGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ D + ++++P K RF AL S +ID+L+RNT WT R++ L F Sbjct: 59 VAVCRAVAAAVLGDGNAVKFVPTTGKTRFTALASGEIDLLARNTTWTFSRDVDLKFEFVG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF+ K G+SS L GA++C+Q GTTTEL LAD+F+++N+ Y P+ E Sbjct: 119 VNYYDGQGFMAPKALGVSSAKDLDGATVCIQTGTTTELNLADFFRSNNISYEPVPIETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E A Y A CD +T D S L + + T + P +H++LP+I+SK PL P + GD W +I Sbjct: 179 EAQAQYLAGACDVFTTDASGLASTRATFENPDDHIVLPEIVSKEPLGPLVRHGDNNWGDI 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDT-TNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 WT A++TAEELG+T N+ + + + NP+V R LG + ++G LGL K W R Sbjct: 239 ARWTLNALITAEELGVTSANVAEHTANAGNNPEVNRLLGTEG--DLGGMLGLDKQWASRA 296 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I GNYGE+F++N+G + + I RG NA W+ GGL+Y+ P R Sbjct: 297 IAVNGNYGEIFEKNIGVNTPIGIARGLNASWTNGGLIYSAPFR 339 >gi|254466846|ref|ZP_05080257.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Rhodobacterales bacterium Y4I] gi|206687754|gb|EDZ48236.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Rhodobacterales bacterium Y4I] Length = 337 Score = 377 bits (969), Expect = e-102, Method: Composition-based stats. Identities = 142/342 (41%), Positives = 215/342 (62%), Gaps = 5/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M ++IL + + S +A L D++ G L CG++ G+ GF+ + G W G D Sbjct: 1 MGNKETLAILA-TAVATMAASAHAGKLEDVRAAGELACGVSEGVPGFSNPNSEGVWTGLD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D CRA+++A D + ++++PL +K++ LA+ S Q+D+ SR T WT+ R+ + G+ F Sbjct: 60 ADICRAVAAATLGDANAVRFVPLASKQKVLAVSSGQVDMTSRTTTWTMKRDSAEGVDFTS 119 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ G++S +L A++C+ GTTTEL +AD+ +A+ + P+VFE Sbjct: 120 VVYYDGQGFMVRADAGVTSAKELDAATVCLTTGTTTELNMADFARANGLTLEPVVFEGKR 179 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E AY + RCDA T D S L A + PS+H ILP+IISK PLAP + GD +W ++ Sbjct: 180 EAVEAYASGRCDALTTDASQLAAFRAGFANPSDHKILPEIISKEPLAPFVAHGDNQWKDV 239 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V+W Y ++TAEELG+TQ N+ ++ + NPDVQR LG S + G LGL+ W I Sbjct: 240 VTWVVYGLITAEELGVTQANVADMAASSANPDVQRLLGA--SGDTGGLLGLSNTWMADAI 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGE+++RNL + L + RG NALWS GG++YA P+R Sbjct: 298 SAIGNYGEIYERNL--TATLGLERGVNALWSDGGILYAMPVR 337 >gi|87302592|ref|ZP_01085409.1| polar amino acid transport system substrate-binding proetin [Synechococcus sp. WH 5701] gi|87282936|gb|EAQ74893.1| polar amino acid transport system substrate-binding proetin [Synechococcus sp. WH 5701] Length = 405 Score = 377 bits (969), Expect = e-102, Method: Composition-based stats. Identities = 135/331 (40%), Positives = 207/331 (62%), Gaps = 8/331 (2%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 + + L I+ R L CG++ L GF+ + +G + G D D CRA+++A+ DPSK Sbjct: 77 SGGGVQSVKLSTIRGRDKLVCGVDGKLPGFSFLGPDGTYSGLDADTCRAVAAAVLGDPSK 136 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS--LGLAFRPITYFDGQGFIMHKKK 135 ++Y LN+ ERF AL S ++D+L+RNT TL R+ + G++F P T++DGQG ++ Sbjct: 137 VEYRDLNSSERFAALASGEVDMLARNTTMTLSRDSAGGNGISFGPTTFYDGQGVMVPVAS 196 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 G ++ L G ICV++GTTTEL LAD + + Y P+ F+ ++ AAY RC A T Sbjct: 197 GARTLKDLDGKPICVESGTTTELNLADRMREQGIAYTPLKFQTGDQTYAAYLGGRCVAVT 256 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D S L A + + +P EH++LP+++SK PL PA + GD W + + WT +A+ AEELG Sbjct: 257 SDRSQLAAKRSSFPKPDEHILLPEVMSKEPLTPASVNGDPAWADALRWTVFALFQAEELG 316 Query: 256 ITQKN----INQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFD 311 IT+ N + + +T D++RFLG++ + G+ LGL D+ + I +GNYGE+F+ Sbjct: 317 ITKANVAAKVAEAKANTNQADLRRFLGVEG--DFGKQLGLPADFVAKTIAAVGNYGEIFE 374 Query: 312 RNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 RN+G S LK+ R N LW++GGL+Y+PP R Sbjct: 375 RNVGTGSPLKLERAENRLWTQGGLIYSPPFR 405 >gi|221370067|ref|YP_002521163.1| Extracellular solute-binding protein, family 3 precursor [Rhodobacter sphaeroides KD131] gi|221163119|gb|ACM04090.1| Extracellular solute-binding protein, family 3 precursor [Rhodobacter sphaeroides KD131] Length = 335 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 129/323 (39%), Positives = 206/323 (63%), Gaps = 4/323 (1%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 F+ + L +K+RG + CG++ GFA + G W GF+VDFC A+++A+F D +K++ Sbjct: 15 FAQSGDTLAAVKERGEVLCGVHPARHGFAAPDSQGKWSGFEVDFCHAIAAAVFGDANKVR 74 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 ++ L++++RF A+QS ++D+L+RN TL R+ +LGL F P ++ G GF++ GI Sbjct: 75 FVALSSQQRFPAIQSGEVDVLARNVTATLSRDTALGLNFAPPIFYTGTGFLVRAADGIEK 134 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 V L GA+IC+ G+TTE +A F A + Y P+V E +++ AY RCDA T D + Sbjct: 135 VEDLDGAAICMAPGSTTERNVAQIFAARGLSYTPVVIENNKQLVDAYVTGRCDALTKDKA 194 Query: 200 ALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 AL ++ + P +HV+LP I SK PLA A+ QGD +WY++V W YA AEELG+TQ Sbjct: 195 ALPGVRAFDTEVPGDHVLLPGIYSKEPLAMAVRQGDDKWYDLVKWVTYATFNAEELGVTQ 254 Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318 N++++ K + +PD+Q LG+ + G LG+ DW Y I++ +GNY +++ R+ G + Sbjct: 255 ANVDEM-KASDDPDIQTLLGVIG--DNGTKLGVPNDWAYAIVKQVGNYEDIYMRHFGPDT 311 Query: 319 ELKIPRGYNALWSKGGLMYAPPI 341 + + R N LW++GGL+Y P+ Sbjct: 312 PVALDRDQNQLWTEGGLLYGFPM 334 >gi|126464337|ref|YP_001045450.1| extracellular solute-binding protein [Rhodobacter sphaeroides ATCC 17029] gi|126106148|gb|ABN78678.1| extracellular solute-binding protein, family 3 [Rhodobacter sphaeroides ATCC 17029] Length = 345 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 129/323 (39%), Positives = 206/323 (63%), Gaps = 4/323 (1%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 F+ + L +K+RG + CG++ GFA + G W GF+VDFC A+++A+F D +K++ Sbjct: 25 FAQSGDTLAAVKERGEVLCGVHPARHGFAAPDSQGKWSGFEVDFCHAIAAAVFGDANKVR 84 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 ++ L++++RF A+QS ++D+L+RN TL R+ +LGL F P ++ G GF++ GI Sbjct: 85 FVALSSQQRFPAIQSGEVDVLARNVTATLSRDTALGLNFAPPIFYTGTGFLVRAADGIEK 144 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 V L GA+IC+ G+TTE +A F A + Y P+V E +++ AY RCDA T D + Sbjct: 145 VEDLDGAAICMAPGSTTERNVAQIFAARGLSYTPVVIENNKQLVDAYVTGRCDALTKDKA 204 Query: 200 ALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 AL ++ + P +HV+LP I SK PLA A+ QGD +WY++V W YA AEELG+TQ Sbjct: 205 ALPGVRAFDTEVPGDHVLLPGIYSKEPLAMAVRQGDDKWYDLVKWVTYATFNAEELGVTQ 264 Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318 N++++ K + +PD+Q LG+ + G LG+ DW Y I++ +GNY +++ R+ G + Sbjct: 265 ANVDEM-KASDDPDIQTLLGVIG--DNGTKLGVPNDWAYAIVKQVGNYEDIYMRHFGPDT 321 Query: 319 ELKIPRGYNALWSKGGLMYAPPI 341 + + R N LW++GGL+Y P+ Sbjct: 322 PVALDRDQNQLWTEGGLLYGFPM 344 >gi|254424681|ref|ZP_05038399.1| hypothetical protein S7335_4841 [Synechococcus sp. PCC 7335] gi|196192170|gb|EDX87134.1| hypothetical protein S7335_4841 [Synechococcus sp. PCC 7335] Length = 350 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 140/324 (43%), Positives = 210/324 (64%), Gaps = 3/324 (0%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 + ++ S L + RG L CG++ G+ GF+ V+A G + G DVD C+A+++A+FDDP ++ Sbjct: 30 AVGSSGSRLQTVLDRGELICGVDGGIPGFSFVEA-GAYSGLDVDVCKAVAAALFDDPEQV 88 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 Y L++ ERF AL+ ++D+LSRNT WTL R+ S+G+ F P T++DGQG ++ + GI+ Sbjct: 89 VYRNLDSTERFEALKGGEVDMLSRNTTWTLSRDTSVGMEFGPTTFYDGQGMLVREADGIA 148 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 +S G S+CV+AGTTTEL LAD + + + P F+ + AAY A C+ T D Sbjct: 149 ELSDFEGRSVCVEAGTTTELNLADQMRQLGVSFEPQTFQDADAAYAAYEAGSCEGMTSDK 208 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 S L A + T P EHV+L +SK PL P I D+ W++ V W YA++ EELG+T Sbjct: 209 SQLIARRSTLTNPDEHVLLDVTMSKEPLGPLTINNDSAWFDTVKWVTYALIEGEELGLTS 268 Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318 +NI + T +P ++RF G + + +G +GL D+ R I+H+GNYGE+++RNLG S Sbjct: 269 ENIEETVASTEDPTIRRFAGEEGT--LGSDMGLPNDFALRAIKHVGNYGEIYERNLGEGS 326 Query: 319 ELKIPRGYNALWSKGGLMYAPPIR 342 + + RG NALWS+GGL+Y+PP R Sbjct: 327 QFALARGQNALWSEGGLLYSPPFR 350 >gi|260757721|ref|ZP_05870069.1| cationic amino acid ABC transporter [Brucella abortus bv. 4 str. 292] gi|260761546|ref|ZP_05873889.1| cationic amino acid ABC transporter [Brucella abortus bv. 2 str. 86/8/59] gi|260668039|gb|EEX54979.1| cationic amino acid ABC transporter [Brucella abortus bv. 4 str. 292] gi|260671978|gb|EEX58799.1| cationic amino acid ABC transporter [Brucella abortus bv. 2 str. 86/8/59] Length = 277 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 154/273 (56%), Positives = 205/273 (75%), Gaps = 3/273 (1%) Query: 72 FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131 F DP+K+++ PLNAKERF A QS ++D+L RNT WT+ R+ SLGL F I Y+DGQGF++ Sbjct: 6 FGDPTKVKFTPLNAKERFTAFQSGEVDVLIRNTTWTISRDTSLGLDFAGINYYDGQGFMI 65 Query: 132 HKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 + KK GI+S QLSGASICVQAGTTTEL +ADYF+A+ M+Y+P+VFE++EE +AAY + Sbjct: 66 NSKKLAGINSALQLSGASICVQAGTTTELNMADYFRANKMEYNPVVFEKIEEANAAYDSG 125 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 RCDAYT D S+LY ++L P +HVILP+IISK P + QGD W ++V WTH A++ Sbjct: 126 RCDAYTTDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDARWADVVRWTHNALL 185 Query: 250 TAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEM 309 AEE GITQ N+ ++ K + NPD++R LG + + IG LGL KDW +II+ +GNYGE+ Sbjct: 186 NAEEYGITQANVEEMKK-SDNPDIKRLLGAEADTKIGTDLGLDKDWVVKIIKGVGNYGEI 244 Query: 310 FDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 F+RN+G+ S LKI RG NA W+KGGL Y P+R Sbjct: 245 FERNIGSGSPLKIARGLNAQWNKGGLQYGIPVR 277 >gi|47114851|emb|CAE48356.1| unnamed protein product [Methylocystis sp. SC2] Length = 343 Score = 374 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 145/319 (45%), Positives = 215/319 (67%), Gaps = 4/319 (1%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 L I KRG+L CG++ GFA+ G+W+GFDVDFCRA++SA+ DDP+K +++ L Sbjct: 29 GPTLAQIMKRGYLTCGVS-DAPGFAQRDGAGEWRGFDVDFCRAVASAVLDDPNKARFVEL 87 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 + KER ALQ+ +D+L + WT R+ S L + I DGQGF++ +++ +SV L Sbjct: 88 SQKERAGALQAGAVDLLVSASPWTQARDTSHRLIYAAIFLHDGQGFLVRRQRKTASVQDL 147 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 GASICV+ GT EL +AD+F+A KY P +F +E+ AY +CDA T D+S L+ Sbjct: 148 DGASICVEQGTPYELAVADFFRARKEKYDPKLFPSLEDAAKAYDEEKCDALTADVSTLHG 207 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 +++ P++H +LPDI+SKSP P + QGD +W NIV WT +AM+ AEEL +++ N + Sbjct: 208 VRIGLTAPADHAVLPDILSKSPRGPLVRQGDDQWLNIVRWTLFAMIDAEELEVSKANAD- 266 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 + + NP ++R LG+D + G+ LGL++DW YRI++H+GNY ++F+RNLG + + Sbjct: 267 AALSSENPQIRRLLGVDGAH--GDDLGLSQDWAYRIVKHVGNYADVFERNLGRGAPYAME 324 Query: 324 RGYNALWSKGGLMYAPPIR 342 R NALW+KGGLMYAPP+R Sbjct: 325 RRLNALWNKGGLMYAPPVR 343 >gi|119510485|ref|ZP_01629618.1| extracellular solute-binding protein, family 3 [Nodularia spumigena CCY9414] gi|119464907|gb|EAW45811.1| extracellular solute-binding protein, family 3 [Nodularia spumigena CCY9414] Length = 358 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 151/358 (42%), Positives = 227/358 (63%), Gaps = 19/358 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASIL----------------GDIKKRGFLKCGINTGL 44 M + + + +I T+ + IK RG L CG++ + Sbjct: 4 MRRSALILAIAPLIFAITACNNPGETTNTNNPNPGTQTTRNRWDAIKSRGQLICGVSGQI 63 Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 GF+ V+ +G + G DVD CRA+++A+FD+P +++ L+A+ERF ALQ+ +ID+LSRNT Sbjct: 64 PGFSFVETDGKYSGIDVDICRAIAAALFDNPDAVEFRNLSAQERFTALQTGEIDVLSRNT 123 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164 WTL R ++GL F P+ ++DGQ ++ K +GI+S++ + +ICVQ+GTTTE LAD Sbjct: 124 SWTLSRATAMGLEFAPVVFYDGQAIMVGKNRGINSLADMKDKAICVQSGTTTEQNLADQM 183 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 + N+ Y PIVFE V A Y RCD T D SAL + ++T P +VIL ++IS Sbjct: 184 RKRNITYKPIVFEDVNVTFATYAEGRCDGITADRSALVSRRITLPNPENNVILDEVISSE 243 Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSN 284 PLAPA+ +GD+ + V+W Y+++ AEELGI +N+ Q + + +PD++RFLG + N Sbjct: 244 PLAPAVAKGDSVLGSAVTWVVYSLIKAEELGINSQNLGQFA-TSNDPDIKRFLGTEG--N 300 Query: 285 IGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GE LGLT D+ RI++H+GNYGE++DRNLG ++ L +PRG N L +GGL+YAPP R Sbjct: 301 LGEGLGLTNDFAARIVKHVGNYGEIYDRNLGPKTNLNLPRGQNQLGQQGGLLYAPPFR 358 >gi|72382453|ref|YP_291808.1| extracellular solute-binding protein [Prochlorococcus marinus str. NATL2A] gi|72002303|gb|AAZ58105.1| amino acid ABC transporter substrate-binding protein, PAAT family [Prochlorococcus marinus str. NATL2A] Length = 353 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 143/349 (40%), Positives = 215/349 (61%), Gaps = 10/349 (2%) Query: 1 MYK--DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + V + L T+ N+S L IK R L CG++ + GF+ +K++G ++G Sbjct: 6 MRRLVSVIVGLAALSAGCATTNQDNSSRLNLIKNRNELICGVSGKIPGFSFLKSDGTYQG 65 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS--LGL 116 DVD C+A ++AI D KIQY PL A ERF A+++ +ID+LSRNT +TL R+ S GL Sbjct: 66 LDVDICKAFAAAIIGDSEKIQYRPLTAAERFTAIKTGEIDLLSRNTTFTLSRDSSGGNGL 125 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F P+ + DGQG ++ K+ IS + L+ SICV +GTTTE + D F++ ++ Y PI + Sbjct: 126 TFAPVVFHDGQGLMVKKESKISGLKDLANKSICVGSGTTTEQNINDAFESASLPYTPIKY 185 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + ++ A Y RC A T D S L A + P EH+IL D++SK PLAPA D + Sbjct: 186 QDLNQVVAGYLQGRCSAMTSDRSQLAAARSGFKNPQEHIILDDVLSKEPLAPASDGQDQK 245 Query: 237 WYNIVSWTHYAMVTAEELGITQKNIN-QVSKDTTNPD---VQRFLGIDKSSNIGEALGLT 292 + + W +++++AEE GIT+ NI+ +V NP ++RFLGID +GE +GL+ Sbjct: 246 LADAMRWVVFSLISAEEQGITKSNIDKKVQIAKNNPQLKPLRRFLGIDG--GLGEKIGLS 303 Query: 293 KDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341 D+ ++I GNYGE+++R+LG SE+ IPRG N L+ KGG+ +PP Sbjct: 304 NDFVVKVISSTGNYGEIYERHLGQNSEVPIPRGQNELYKKGGVHISPPF 352 >gi|124026134|ref|YP_001015250.1| extracellular solute-binding protein [Prochlorococcus marinus str. NATL1A] gi|123961202|gb|ABM75985.1| extracellular solute-binding protein, family 3 [Prochlorococcus marinus str. NATL1A] Length = 353 Score = 371 bits (952), Expect = e-100, Method: Composition-based stats. Identities = 143/349 (40%), Positives = 215/349 (61%), Gaps = 10/349 (2%) Query: 1 MYK--DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + V + L T+ N+S L IK R L CG++ + GF+ +K++G ++G Sbjct: 6 MRRLVSVIVGLAALSAGCATTNQDNSSRLNLIKNRNELICGVSGKIPGFSFLKSDGTYQG 65 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS--LGL 116 DVD C+A ++AI D KIQY PL A ERF A+++ +ID+LSRNT +TL R+ S GL Sbjct: 66 LDVDICKAFAAAIIGDSEKIQYRPLTAAERFTAIKTGEIDLLSRNTTFTLSRDSSGGNGL 125 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F P+ + DGQG ++ K+ IS + L+ SICV +GTTTE + D F++ ++ Y PI + Sbjct: 126 TFAPVVFHDGQGLMVKKESKISGLKDLANKSICVGSGTTTEQNINDAFESASLPYTPIKY 185 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + ++ A Y RC A T D S L A + P EH+IL D++SK PLAPA D + Sbjct: 186 QDLNQVVAGYLQGRCSAMTSDRSQLAAARSGFKNPKEHIILEDVLSKEPLAPASDGQDQK 245 Query: 237 WYNIVSWTHYAMVTAEELGITQKNIN-QVSKDTTNPD---VQRFLGIDKSSNIGEALGLT 292 + + W +++++AEE GIT+ NI+ +V NP ++RFLGID +GE +GL+ Sbjct: 246 LADAMRWVVFSLISAEEQGITKSNIDKKVQIAKNNPQLKPLRRFLGIDG--GLGEKIGLS 303 Query: 293 KDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341 D+ ++I GNYGE+++R+LG SE+ IPRG N L+ KGG+ +PP Sbjct: 304 NDFVVKVISSTGNYGEIYERHLGQNSEVPIPRGQNELYKKGGVHISPPF 352 >gi|254469135|ref|ZP_05082540.1| glutamate/glutamine/aspartate/asparagine-binding protein [Pseudovibrio sp. JE062] gi|211960970|gb|EEA96165.1| glutamate/glutamine/aspartate/asparagine-binding protein [Pseudovibrio sp. JE062] Length = 678 Score = 371 bits (952), Expect = e-100, Method: Composition-based stats. Identities = 132/318 (41%), Positives = 195/318 (61%), Gaps = 2/318 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L + + +A L D+++RG L+C ++TGL GF+ NG W+GFD Sbjct: 1 MKKMILPVALGAAFAATSLSAASAGTLEDVQERGKLRCAVSTGLAGFSYTDENGKWQGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+CRA+++A+ D +++ P K RF AL S ++DILSRNT WT R+ L F Sbjct: 61 VDYCRAVAAAVLGDADAVEFSPTTGKTRFTALASGEVDILSRNTTWTFSRDADLKFTFLG 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 ++Y+DGQGF++ K G++S +L GA++C+Q GTTTEL L+DYF A M Y P+ E Sbjct: 121 VSYYDGQGFMVKKSLGVASAKELDGATVCIQTGTTTELNLSDYFTAEGMSYEPLSIETNT 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E A Y A CD YT D S L A + T + +H++LP+IISK PL P + GD +W +I Sbjct: 181 EGRANYLADACDVYTTDASGLAASRATFENADDHIVLPEIISKEPLGPLVRHGDDQWADI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 W A+ AEE GIT N ++++ ++ +P+V R LG +G ++GL D+ I Sbjct: 241 GRWVLNALKIAEEKGITAANADEMAANSKDPEVLRLLGASGE--MGASVGLGNDFALVAI 298 Query: 301 RHMGNYGEMFDRNLGNQS 318 + +GNYGE+F+R+LG Q+ Sbjct: 299 KAVGNYGEVFERHLGTQT 316 >gi|113953701|ref|YP_730400.1| polar amino acid ABC transporter periplasmic amino acid-binding protein [Synechococcus sp. CC9311] gi|113881052|gb|ABI46010.1| polar amino amino acid ABC transporter (PAAT) family, periplasmic amino acid-binding protein [Synechococcus sp. CC9311] Length = 381 Score = 371 bits (952), Expect = e-100, Method: Composition-based stats. Identities = 137/343 (39%), Positives = 216/343 (62%), Gaps = 8/343 (2%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 VS L ++ T AS L IK+R L+CG++ + GF+ ++ +G + G DVD CR Sbjct: 41 LVSFLFILNGCATLGEGGASRLDLIKRRAELRCGVSGKIPGFSFLRRDGSFAGLDVDICR 100 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS--LGLAFRPITY 123 A ++A+ P ++QY L A ERF AL++ +ID+LSRNT + L R+ G++F P+ + Sbjct: 101 AFAAALTGSPDQVQYRSLTAPERFTALRTGEIDLLSRNTTFNLSRDAVGGNGVSFAPVVF 160 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 DGQG ++ ++ G+S ++ L G +ICV +GTTTE L D F+A + Y PI ++ + ++ Sbjct: 161 HDGQGLLVKRQSGVSDLNDLQGKTICVGSGTTTEQNLNDAFQARGIDYKPIKYQDLNQVI 220 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 A Y RC A T D S L A + + P +HVILP+++SK PLAP GD + + W Sbjct: 221 AGYLQGRCSAMTSDRSQLAAARSGFNNPEQHVILPEVLSKEPLAPLAAGGDQRLADAMRW 280 Query: 244 THYAMVTAEELGITQKNI-NQVSKDTTNPD---VQRFLGIDKSSNIGEALGLTKDWTYRI 299 YA++ AEELGITQ+NI +++ + P+ ++RFLG++ +GE LGL D+ ++ Sbjct: 281 VIYALIAAEELGITQQNIGDKLEEAQRRPELTQLRRFLGVEGE--LGEKLGLNNDFIVKV 338 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNYGE+++R+LG S + IPRG N L+ GG++ +PP + Sbjct: 339 IQAVGNYGEIYNRHLGPDSAVPIPRGLNNLYRNGGVLTSPPFQ 381 >gi|148655565|ref|YP_001275770.1| extracellular solute-binding protein [Roseiflexus sp. RS-1] gi|148567675|gb|ABQ89820.1| extracellular solute-binding protein, family 3 [Roseiflexus sp. RS-1] Length = 415 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 134/323 (41%), Positives = 202/323 (62%), Gaps = 10/323 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN- 84 L +K+RG+L CG N L GF + W GFDVDFCRA+++AIF D +K++++ L Sbjct: 96 LARVKERGYLICGTNADLPGFGFYDSVRQTWSGFDVDFCRAVAAAIFGDATKVEFVALGT 155 Query: 85 ---AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 RF A++ ++D+L RNT WTL R IS GLAF P T+ DGQ F++ K I+ + Sbjct: 156 GPGPNNRFDAVREGRVDVLFRNTTWTLGRNIS-GLAFGPTTFHDGQTFMVRAKDRITKLE 214 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L G ICV GTT+E L D F A +++ V + +E+ AY CDA T D S L Sbjct: 215 DLEGKVICVAKGTTSEQNLNDDFAARGIRFTARVLDGEDELYPAYDEGECDAVTSDSSQL 274 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 A + P++H+IL D IS+ PL P I + D +W +++SWT +A + AEEL + Q+N+ Sbjct: 275 AAKRQQLKNPADHIILGDRISREPLGPVIARDDNQWLDVISWTVFATIYAEELRVDQRNV 334 Query: 262 NQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELK 321 +++ TT+P ++R LG++ N GE LGL D+ Y+II+ +GNYG++++RNLG + + Sbjct: 335 DRLRTSTTDPRIKRLLGLEG--NFGEGLGLPNDFAYQIIKQVGNYGDIYNRNLGPNTVIN 392 Query: 322 IPRGYNALWS--KGGLMYAPPIR 342 + RG N +W+ GG++ +PP R Sbjct: 393 LDRGPNKVWNLGAGGVLASPPFR 415 >gi|78213330|ref|YP_382109.1| extracellular solute-binding protein [Synechococcus sp. CC9605] gi|78197789|gb|ABB35554.1| extracellular solute-binding protein, family 3 [Synechococcus sp. CC9605] Length = 353 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 142/348 (40%), Positives = 205/348 (58%), Gaps = 11/348 (3%) Query: 3 KDFFVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + V++ L + S S L +K RG L CG++ + GF+ + +G + G Sbjct: 7 RVLIVALAGLSSFLASCASLDSAAGSRLDLVKARGELLCGVSGKIPGFSFLNPDGRYTGL 66 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI--SLGLA 117 DVD CRA+++A D K+QY PL A ERF AL+S +ID+LSRNT TL R+ GL Sbjct: 67 DVDICRAMAAAFVGDAEKVQYRPLTAPERFTALRSGEIDLLSRNTTHTLSRDAMGGNGLR 126 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F P+ + DGQG +++ G+ S++ LSG SICV +GTTTE L D F + + Y PI ++ Sbjct: 127 FGPVVFHDGQGLMVNAASGVRSLADLSGKSICVGSGTTTEQNLNDAFASQGLPYTPIKYQ 186 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + ++ Y RC+A T D S L A + P H IL D ISK PLAPA++ GD Sbjct: 187 DLNQVVGGYLQGRCEAMTSDRSQLAAARSGFSDPQAHQILDDRISKEPLAPAVVGGDQPM 246 Query: 238 YNIVSWTHYAMVTAEELGITQKNIN----QVSKDTTNPDVQRFLGIDKSSNIGEALGLTK 293 + ++W A++ AEE GITQ N++ Q + D + ++RFLG+D +G LGL Sbjct: 247 GDAMTWVVNALIEAEERGITQANVDAVVKQAAADPSQTSLRRFLGVDP--GLGRKLGLAD 304 Query: 294 DWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341 D+ ++IR GNYGE+++R+LG S + IPRG N L +GGLM +PP Sbjct: 305 DFVVQVIRATGNYGEIYNRHLGLDSAVAIPRGANRLAGEGGLMISPPF 352 >gi|78184422|ref|YP_376857.1| extracellular solute-binding protein [Synechococcus sp. CC9902] gi|78168716|gb|ABB25813.1| extracellular solute-binding protein, family 3 [Synechococcus sp. CC9902] Length = 367 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 142/340 (41%), Positives = 206/340 (60%), Gaps = 8/340 (2%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 ++ LI T +S L ++ RG L CG++ + GF+ + G + GFDVD C+A+ Sbjct: 29 GLVGLISGCATLSDGTSSRLDLVQSRGELLCGVSGKIPGFSFLSPEGRYAGFDVDICKAM 88 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS--LGLAFRPITYFD 125 ++A D +K+QY PL A ERF AL+S +ID+LSRNT TL R+ + GL+F P + D Sbjct: 89 AAAFVGDSAKVQYRPLTAPERFTALRSGEIDLLSRNTTHTLSRDAAGGNGLSFAPTVFHD 148 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 GQG ++ G+ S++ LSG +ICV +GTTTE L D F A + Y PI ++ + ++ Sbjct: 149 GQGLMVSVGSGVRSIADLSGKAICVGSGTTTEQNLNDAFAAQGLPYTPIKYQDLNQVVGG 208 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 Y RC A T D S L + + P +HVIL D +SK PLAPA++ GD + +W Sbjct: 209 YLQGRCAAMTSDRSQLASARSGFKDPQQHVILEDRLSKEPLAPAVVGGDQRMADATNWVV 268 Query: 246 YAMVTAEELGITQKNINQVSK----DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301 YA++ AEE GITQ N++ V + D + ++RFLG+D +G LGL D+ ++IR Sbjct: 269 YALIEAEERGITQANLDDVLERAVADPSQAALRRFLGVDG--GLGAKLGLPDDFVVQVIR 326 Query: 302 HMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341 GNYGE+++R+LG S + IPRG N L +GGLM APP Sbjct: 327 ATGNYGEIYNRHLGPGSAVTIPRGPNRLGVEGGLMIAPPF 366 >gi|124022922|ref|YP_001017229.1| amino acid ABC transporter substrate-binding protein [Prochlorococcus marinus str. MIT 9303] gi|123963208|gb|ABM77964.1| ABC transporter for amino acids, substrate binding protein [Prochlorococcus marinus str. MIT 9303] Length = 349 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 140/350 (40%), Positives = 211/350 (60%), Gaps = 11/350 (3%) Query: 1 MYKDFFVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M + F ++ L +L S S L I KRG L CG++ + GF+ + NG ++ Sbjct: 1 MIRRFATGLVTLSLLATGCASIDQGGGSRLELISKRGQLHCGVSGKIPGFSFLLGNGRYE 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS--LG 115 G DVD CRA+++A+ D +K+QY PL A ERF AL++ +ID+LSRNT L R+ + G Sbjct: 61 GLDVDICRAMAAAVVGDATKVQYRPLTAPERFTALKTGEIDLLSRNTTLNLSRDAAGGNG 120 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 L F P+ + DGQG ++ + GI + L ++ICV +GTTTE L D F+ + Y PI Sbjct: 121 LTFAPVVFHDGQGLMVKRSTGIKGLQDLKASNICVGSGTTTEQNLNDAFQERKLSYTPIK 180 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 ++ + ++ A Y RC A T D S L A + P +H+IL ++SK PLAPA + GD Sbjct: 181 YQDLNQVVAGYLQGRCLAMTSDRSQLAAARSGFPDPEQHIILDVVLSKEPLAPASVGGDQ 240 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNIN-QVSKDTTNPD---VQRFLGIDKSSNIGEALGL 291 + + W +A+ AEE GITQ+N++ ++ + TNP ++RFLG+D +G+ LGL Sbjct: 241 RLGDAIRWVVFALFAAEEFGITQENVDSKLQQAKTNPQMSSLRRFLGVDA--GLGQKLGL 298 Query: 292 TKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341 D+ ++IR GNYGE+++R+LG S + IPRG N + +GGL+ APP Sbjct: 299 ADDFVVKVIRATGNYGEIYNRHLGPNSSVPIPRGLNRSYRQGGLLIAPPF 348 >gi|254417720|ref|ZP_05031444.1| hypothetical protein BBAL3_30 [Brevundimonas sp. BAL3] gi|196183897|gb|EDX78873.1| hypothetical protein BBAL3_30 [Brevundimonas sp. BAL3] Length = 356 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 139/322 (43%), Positives = 203/322 (63%), Gaps = 4/322 (1%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 ++ L +K+RG L CG++ GLVGFA G W+GFD DFCRA+++AIF D + ++++P Sbjct: 37 DSPTLIAVKRRGRLNCGVHQGLVGFAYTDNRGQWRGFDADFCRAMAAAIFGDGNAVRFVP 96 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 L+A +RF AL+ ++D+L RN+ WT+ R+ G F I Y+DGQGF++ + ++S ++ Sbjct: 97 LSASDRFAALKEGRVDVLWRNSSWTMSRDAGEGFVFAGINYYDGQGFLVRRSLSLASATE 156 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+GA ICVQAG+T + D+F++ + Y P+V E AY CDA + DISAL Sbjct: 157 LNGARICVQAGSTAQANADDFFRSRGIAYRPVVLPSEEAARDAYGREDCDALSADISALA 216 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 A + H IL D++SK PL P + GD W ++V WT A+V AEE G+TQ+N Sbjct: 217 AARTVLADSQAHTILSDVVSKEPLGPVVRAGDERWADVVRWTLNAVVLAEEFGVTQENAE 276 Query: 263 QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKI 322 +SK + +P ++R LG + G LGL+ DW I +GNYG++FDRNLG+QS L + Sbjct: 277 ALSKTSNDPRIKRLLGSEGE--YGALLGLSDDWAKDAILSVGNYGQIFDRNLGSQSPLDL 334 Query: 323 PRGYNALWSK--GGLMYAPPIR 342 RG NA W+ GL+Y PIR Sbjct: 335 ARGLNAQWNARPAGLIYGLPIR 356 >gi|260434256|ref|ZP_05788226.1| general L-amino acid-binding periplasmic protein AapJ [Synechococcus sp. WH 8109] gi|260412130|gb|EEX05426.1| general L-amino acid-binding periplasmic protein AapJ [Synechococcus sp. WH 8109] Length = 368 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 141/354 (39%), Positives = 207/354 (58%), Gaps = 15/354 (4%) Query: 1 MYKD----FFVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M++ V++ L + S S L +K RG L CG++ + GF+ + ++ Sbjct: 16 MFRSSSRVLIVALAGLSSFLASCASLDSAAGSRLDLVKARGELLCGVSGKIPGFSFLSSD 75 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G + G DVD CRA+++A D K+QY PL A ERF AL+S +ID+LSRNT TL R+ Sbjct: 76 GRYTGLDVDICRAMAAAFVGDAEKVQYRPLTAPERFTALRSGEIDLLSRNTTHTLSRDAV 135 Query: 114 --LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 GL F P+ + DGQG +++ G+ S++ LSG SICV +GTTTE L D F + + Y Sbjct: 136 GGNGLRFGPVVFHDGQGLMVNAASGVRSLADLSGKSICVGSGTTTEQNLNDAFASKGLPY 195 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 PI ++ + ++ Y RC A T D S L A + P H IL D ISK PL+PA++ Sbjct: 196 IPIKYQDLNQVVGGYLQGRCAAMTSDRSQLAAARSGFSDPEAHQILDDRISKEPLSPAVV 255 Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNIN----QVSKDTTNPDVQRFLGIDKSSNIGE 287 GD + ++W ++ AEE GITQ N++ Q + D++ ++RFLG+D +G Sbjct: 256 GGDQPMGDAMTWVINGLIEAEERGITQANVDAVVKQAAADSSQTALRRFLGVDP--GLGR 313 Query: 288 ALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341 LGL D+ ++IR GNYGE+++R+LG S + IPRG N L +GGLM +PP Sbjct: 314 KLGLADDFVVQVIRATGNYGEIYNRHLGPDSAVAIPRGANRLAGEGGLMISPPF 367 >gi|88808790|ref|ZP_01124300.1| ABC transporter for amino acids, substrate binding protein [Synechococcus sp. WH 7805] gi|88787778|gb|EAR18935.1| ABC transporter for amino acids, substrate binding protein [Synechococcus sp. WH 7805] Length = 338 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 134/340 (39%), Positives = 210/340 (61%), Gaps = 8/340 (2%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 +L + T AS L I++RG L+CG++ + GF+ ++ +G + G DVD C+A + Sbjct: 1 MLFGLYACATLGEGGASRLDLIRQRGELRCGVSGKIPGFSFLERDGRYAGLDVDMCQAFA 60 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS--LGLAFRPITYFDG 126 +A D SK++Y PL A ERF AL++ +ID+LSRNT + L R+ S G+ F P+ + DG Sbjct: 61 AAFVGDSSKVEYRPLTAPERFTALRTGEIDLLSRNTTFNLSRDASGGNGVTFAPVVFHDG 120 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 QG ++ + GI + L +ICV +GTTTE L D F+A + Y P+ ++ + ++ A Y Sbjct: 121 QGLLVRRNSGIKGLDDLRDKTICVGSGTTTEQNLNDVFQARGIAYKPVKYQDLNQLVAGY 180 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 RC A T D S L + + +P+ H ILP+++SK PLAP GD + + W Y Sbjct: 181 LQGRCSAMTSDRSQLASARSGFAQPNNHQILPEVLSKEPLAPLSSGGDQRLADAMRWVVY 240 Query: 247 AMVTAEELGITQKNIN-QVSKDTTNPD---VQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302 A++TAEE+GIT+ N++ ++ + T++P ++RFLG+D +G LGL D+ +++ Sbjct: 241 ALITAEEMGITKANVDVKLQEATSDPSKTALRRFLGVDGE--LGSKLGLRNDFVVSVLKT 298 Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE++DR+LG QS + IPRG N L GG++ APP + Sbjct: 299 TGNYGEIYDRHLGPQSAVPIPRGLNQLHRDGGVLIAPPFQ 338 >gi|148239754|ref|YP_001225141.1| ABC transporter, substrate binding protein for amino acids [Synechococcus sp. WH 7803] gi|147848293|emb|CAK23844.1| ABC transporter, substrate binding protein for amino acids [Synechococcus sp. WH 7803] Length = 338 Score = 368 bits (944), Expect = e-99, Method: Composition-based stats. Identities = 132/340 (38%), Positives = 205/340 (60%), Gaps = 8/340 (2%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 +L + T AS L +++RG L+CG++ + GF+ + G + G DVD C+A + Sbjct: 1 MLVGLQACATLGEGGASRLDLVRQRGELRCGVSGKIPGFSFLDREGRYAGLDVDMCKAFA 60 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS--LGLAFRPITYFDG 126 +A D +K++Y PL A ERF AL++ +ID+LSRNT + L R+ S G+AF P+ + DG Sbjct: 61 AAFVGDANKVEYRPLTAPERFTALRTGEIDLLSRNTTFNLSRDASGGNGVAFAPVVFHDG 120 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 QG ++ + GI + L +ICV +GTTTE L D F+A + Y P+ ++ + ++ A Y Sbjct: 121 QGLLVRRDSGIKRLEDLRNQTICVGSGTTTEQNLNDVFQAKGIPYKPVKYQDLNQLVAGY 180 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 RC A T D S L + + ++P H ILP+++SK PLAP GD + + W Y Sbjct: 181 LQKRCAAMTSDRSQLASARSGFEQPGNHQILPEVLSKEPLAPLSSGGDQRLADAMRWVVY 240 Query: 247 AMVTAEELGITQKNIN----QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302 A+VTAEE+GITQ N++ + D + ++RFLG++ +G LGL D+ +++ Sbjct: 241 ALVTAEEMGITQNNVDAKLQEAINDPSKTALRRFLGVEGE--LGSKLGLPNDFVVSVLKA 298 Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+++R+LG QS + IPRG N L GG++ APP + Sbjct: 299 TGNYGEIYNRHLGPQSAVPIPRGLNQLHRDGGVLIAPPFQ 338 >gi|116749482|ref|YP_846169.1| extracellular solute-binding protein [Syntrophobacter fumaroxidans MPOB] gi|116698546|gb|ABK17734.1| extracellular solute-binding protein, family 3 [Syntrophobacter fumaroxidans MPOB] Length = 347 Score = 367 bits (943), Expect = 1e-99, Method: Composition-based stats. Identities = 128/340 (37%), Positives = 201/340 (59%), Gaps = 4/340 (1%) Query: 5 FFVSILCLIILFFT-SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 F V++L +L F + ++ L IK RG L+CG++ G+ GF+ +G W G DVDF Sbjct: 10 FLVTLLIASVLLFPENVASAGDTLIRIKARGKLRCGVSDGIPGFSWKGPDGRWTGMDVDF 69 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 CRAL++A+ DP K+ ++PL A RF AL++ ++D+L+RNT WT+ RE LG+ F + Sbjct: 70 CRALAAAVLKDPEKVDFVPLTASRRFPALKAGELDVLARNTTWTMEREAVLGILFAGVLV 129 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 +D QGF++ GI+ +SQL GA++CV G++ E +A F A N Y P+ E + Sbjct: 130 YDTQGFLVPTSSGITELSQLDGATVCVVRGSSHEEHIAQTFGARNWTYQPLQVESSVQAM 189 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 AA +C A+T + L ++ P ++ +L + IS+ P+ P + +GD +W+ IV Sbjct: 190 AALNEGKCKAFTSESPQLKTARMNAPDGPDQYSLLKETISEEPMGPVVRRGDEDWFTIVR 249 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302 W + ++ AE+ G T N+ + T + + +D I ++LG+ W R++ Sbjct: 250 WVLFTLILAEDGGYTGANVRSRLEKTADFRAMSWKQLDGL--IAKSLGIDPGWRIRVVES 307 Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGE+F+RNLG+QS L + RG N LW GLMYAPP R Sbjct: 308 VGNYGEVFERNLGSQSTLNLERGPNKLWKDAGLMYAPPFR 347 >gi|33863169|ref|NP_894729.1| ABC transporter for amino acids, substrate binding protein [Prochlorococcus marinus str. MIT 9313] gi|33635086|emb|CAE21072.1| ABC transporter for amino acids, substrate binding protein [Prochlorococcus marinus str. MIT 9313] Length = 349 Score = 367 bits (943), Expect = 1e-99, Method: Composition-based stats. Identities = 139/350 (39%), Positives = 207/350 (59%), Gaps = 11/350 (3%) Query: 1 MYKDFFVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M + ++ L +L S S L I KRG L CG++ + GF+ + NG ++ Sbjct: 1 MMRRLTTGLVTLSLLATGCASIDQGGGSRLELISKRGQLNCGVSGKIPGFSFLLGNGRYE 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS--LG 115 G DVD CRA+++A D +K+QY PL A ERF AL++ +ID+LSRNT L R+ + G Sbjct: 61 GLDVDICRAMAAAFIGDATKVQYRPLTAPERFTALKTGEIDLLSRNTTLNLSRDAAGGNG 120 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 L F P+ + DGQG ++ + GI + L ++ICV +GTTTE L D F+ + Y PI Sbjct: 121 LTFAPVVFHDGQGLMVKRSSGIKGLQDLKASNICVGSGTTTEQNLNDAFQERKLSYTPIK 180 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 ++ + ++ A Y RC A T D S L A + P +H+IL ++SK PLAPA + GD Sbjct: 181 YQDLNQVVAGYLQGRCLAMTSDRSQLAAARSGFPDPEQHIILDVVLSKEPLAPASVGGDQ 240 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDT-TNPD---VQRFLGIDKSSNIGEALGL 291 + + W +A+ AEE GITQ+N++ + TNP ++RFLG+D +G+ LGL Sbjct: 241 RLGDAIRWVVFALFAAEEFGITQENVDSKLEQAQTNPQMSSLRRFLGVDA--GLGQKLGL 298 Query: 292 TKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341 D+ ++IR GNYGE+++R+LG S + IPRG N + +GGL+ APP Sbjct: 299 VDDFVVKVIRATGNYGEIYNRHLGPNSSVPIPRGRNRSYRQGGLLIAPPF 348 >gi|156741676|ref|YP_001431805.1| extracellular solute-binding protein [Roseiflexus castenholzii DSM 13941] gi|156233004|gb|ABU57787.1| extracellular solute-binding protein family 3 [Roseiflexus castenholzii DSM 13941] Length = 411 Score = 367 bits (942), Expect = 1e-99, Method: Composition-based stats. Identities = 133/323 (41%), Positives = 201/323 (62%), Gaps = 10/323 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN- 84 L +K+RG+L CG N L GF W GFDVDFCRA+++AIF D +K++++ L Sbjct: 92 LARVKERGYLICGTNADLPGFGFYDNVRQAWSGFDVDFCRAVAAAIFGDATKVEFVALGT 151 Query: 85 ---AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 RF A++ ++D+L RNT WTL R IS GLAF P T+ DGQ F++ + I+ + Sbjct: 152 GPGPNNRFDAVREGRVDVLFRNTTWTLGRNIS-GLAFGPTTFHDGQTFMVRIRDRITKLE 210 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L+G ICV GTT+E L D F A +++ V +E+ AY CDA T D S L Sbjct: 211 DLAGKVICVAKGTTSEQNLNDDFAARGIQFTARVLNGEDELYPAYDEGECDAVTSDSSQL 270 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 A + P++H+IL D IS+ PL P I + D +W +++SWT +A + AEEL + Q+N+ Sbjct: 271 AAKRQQLKNPADHIILGDRISREPLGPVIARDDNQWLDVISWTVFATIYAEELRVDQRNV 330 Query: 262 NQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELK 321 +++ TT+P ++R LG++ N GE LGL D+ Y+II+ +GNYG++++RNLG + + Sbjct: 331 DRLRASTTDPRIKRLLGLEG--NFGEGLGLPNDFAYQIIKQVGNYGDIYNRNLGPNTVIN 388 Query: 322 IPRGYNALWS--KGGLMYAPPIR 342 + RG N +W+ GG++ +PP R Sbjct: 389 LDRGPNKVWNLGAGGVLASPPFR 411 >gi|123966465|ref|YP_001011546.1| ABC transporter for amino acids, substrate binding protein [Prochlorococcus marinus str. MIT 9515] gi|123200831|gb|ABM72439.1| ABC transporter for amino acids, substrate binding protein [Prochlorococcus marinus str. MIT 9515] Length = 349 Score = 367 bits (942), Expect = 2e-99, Method: Composition-based stats. Identities = 145/350 (41%), Positives = 212/350 (60%), Gaps = 11/350 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M F I +L S S L I+KR L CG++ + GF+ ++ +G +K Sbjct: 1 MINRLFFGIAAFGLLLTGCASNQQENISRLSLIQKRDELICGVSGKIPGFSFIERDGKYK 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE--ISLG 115 G DVD C+A +SAI D KIQ+ PL A ERFLA+++ ID+LSRNT +TL R+ G Sbjct: 61 GLDVDICKAFASAIIGDSEKIQFRPLTAAERFLAIKTGDIDLLSRNTTFTLSRDSFEGNG 120 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 L F P+ + DGQG ++ K GI S+ +L+ SICV +GTTTE + D F++ ++ Y PI Sbjct: 121 LTFAPVVFHDGQGLMVKKNSGIDSIQELANKSICVGSGTTTEQNINDTFESLSLPYVPIK 180 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 ++ + ++ A Y RC+A T D S L A + +H+IL +++SK PLAPA + Sbjct: 181 YQDLNQVVAGYLQGRCEAMTSDRSQLAAARSGFKNAKDHIILDNVLSKEPLAPASNGSEQ 240 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNI-NQVSKDTTNPD---VQRFLGIDKSSNIGEALGL 291 + + + WT +A++ AEE GITQ NI ++V NP ++RFLGID +GE +GL Sbjct: 241 KLADAMRWTIFALIAAEEQGITQLNIDDKVQLAKNNPQLKSLRRFLGIDG--GLGEKIGL 298 Query: 292 TKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341 D+ +I+ GNYGE++DRNLG S++ IPRG N ++SKGGL +PP Sbjct: 299 RNDFVVNVIKATGNYGEIYDRNLGKDSDVPIPRGLNKIYSKGGLHISPPF 348 >gi|33865374|ref|NP_896933.1| ABC transporter, substrate binding protein for amino acids [Synechococcus sp. WH 8102] gi|33632543|emb|CAE07355.1| ABC transporter, substrate binding protein for amino acids [Synechococcus sp. WH 8102] Length = 353 Score = 367 bits (942), Expect = 2e-99, Method: Composition-based stats. Identities = 141/349 (40%), Positives = 203/349 (58%), Gaps = 12/349 (3%) Query: 3 KDFFVSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 + + + ++ + S L +K+R L CG++ + GF+ + G + G Sbjct: 6 RRILIGAITVVAGLLGGCASLDEAGRSRLDLVKQRDELLCGVSGKIPGFSFLTPKGTYTG 65 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS--LGL 116 DVD CRA+++A D K+QY PL A ERF AL+S +ID+LSRNT TL R+ GL Sbjct: 66 LDVDICRAMAAAFLGDADKVQYRPLTAPERFTALRSGEIDLLSRNTTHTLSRDAEGGNGL 125 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F P+ + DGQG I+ G++S++ LSG +ICV +GTTTE L D F + + Y PI + Sbjct: 126 GFAPVVFHDGQGLIVPVNSGVTSLADLSGQAICVGSGTTTEQNLNDAFASKGIPYTPIKY 185 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + ++ Y RC A T D S L A + P HVIL D +SK PLAPA++ GD Sbjct: 186 QDLNQVVGGYLQGRCQAMTSDRSQLAAARSGFIEPEGHVILEDRLSKEPLAPAVVGGDQR 245 Query: 237 WYNIVSWTHYAMVTAEELGITQKNIN-QVSKDTTNPD---VQRFLGIDKSSNIGEALGLT 292 + ++W YA++ AEE GITQ N++ Q+ +P ++RFLG+D +G LGL Sbjct: 246 LVDAMTWVVYALIEAEERGITQANLDRQLRAAEADPSQAAMRRFLGVDG--GLGRKLGLP 303 Query: 293 KDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341 D+ + IR GNYGE++DR+LG +S + IPRG N L GGLM APP Sbjct: 304 DDFVVQAIRATGNYGEIYDRHLGPESPVAIPRGANRLAEDGGLMIAPPF 352 >gi|269964209|ref|ZP_06178500.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio harveyi 1DA3] gi|269831058|gb|EEZ85226.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio harveyi 1DA3] Length = 285 Score = 366 bits (941), Expect = 2e-99, Method: Composition-based stats. Identities = 143/271 (52%), Positives = 190/271 (70%), Gaps = 3/271 (1%) Query: 72 FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131 + +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F + Y+DGQGF++ Sbjct: 18 LGNKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVGVNYYDGQGFMV 77 Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191 K G+SS +L GAS+CVQ+GTTTEL LADYF+ M Y P+VF+ + + A RC Sbjct: 78 KKDLGVSSAKELDGASVCVQSGTTTELNLADYFRNQGMAYKPVVFDTAAQTSKGFDAGRC 137 Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 D T D S LYAL+L PS +LP+IISK PL P + QGD +W+NI WT +AMV A Sbjct: 138 DVLTTDQSGLYALRLNLKDPSSATVLPEIISKEPLGPVVRQGDDQWFNIAKWTLFAMVNA 197 Query: 252 EELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFD 311 EE GIT KN +++ K + +P+++R LG+D G+ LG+ DW Y++I+ +GNYGE F+ Sbjct: 198 EEYGITSKNADEMLK-SKDPNIKRILGVDGPK--GKGLGIRDDWGYQVIKQVGNYGESFE 254 Query: 312 RNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 R +G S LKI RG NALW+ GG MYAPPIR Sbjct: 255 RTVGTGSPLKISRGVNALWNAGGFMYAPPIR 285 >gi|83858265|ref|ZP_00951787.1| ABC glutamate/glutamine/aspartate/asparagine transporter, periplasmic substrate-binding protein [Oceanicaulis alexandrii HTCC2633] gi|83853088|gb|EAP90940.1| ABC glutamate/glutamine/aspartate/asparagine transporter, periplasmic substrate-binding protein [Oceanicaulis alexandrii HTCC2633] Length = 353 Score = 366 bits (941), Expect = 2e-99, Method: Composition-based stats. Identities = 132/346 (38%), Positives = 205/346 (59%), Gaps = 6/346 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI----LGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M L FT ++ + ++++RG L+CG++TGLVGFA+ G W Sbjct: 10 MDPRRLAKGAAAFALGFTVSHSDLDSVTSHMDEVQRRGVLRCGVDTGLVGFAQTDETGSW 69 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GF+V+ CRA ++A +DP + +++P +RF A++ ++DIL RNT WTL R G+ Sbjct: 70 SGFEVELCRAYAAAFLNDPDRAEFIPTTTLDRFRAVREGEVDILLRNTSWTLSRATLQGV 129 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F I Y+DGQGF+ G++S +LSGA ICVQ TT+ L L DY + + + + + Sbjct: 130 RFAGIYYYDGQGFLTPADLGLTSAQELSGARICVQPETTSALNLDDYAERYGLDFTIVSV 189 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E V + AY A +CDA+T D+S L + + P H++LPD+ISK PL+P + D Sbjct: 190 ETVADARTAYEAGQCDAFTSDVSRLAGFRRSLSEPDRHMVLPDVISKEPLSPVVRDDDDA 249 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWT 296 + V W +++ AEE G+TQ + ++ P+V+R L +D+ + +LGL D+ Sbjct: 250 FAMAVEWVLTSLIAAEEYGVTQSQAASADQTSSRPEVRRLLEVDEE--VAASLGLENDFA 307 Query: 297 YRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + I G+YGE+F+RNLG S+L++ RG NA W +GGL+YAPP+R Sbjct: 308 RQAIAVGGHYGELFERNLGEASQLQLERGLNAQWKEGGLLYAPPVR 353 >gi|56697221|ref|YP_167586.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Ruegeria pomeroyi DSS-3] gi|56678958|gb|AAV95624.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Ruegeria pomeroyi DSS-3] Length = 337 Score = 366 bits (940), Expect = 3e-99, Method: Composition-based stats. Identities = 138/318 (43%), Positives = 206/318 (64%), Gaps = 4/318 (1%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 L D++ G L CG++ G+ GF+ + G W G D D CRA+++A D + ++++PL Sbjct: 24 GKLDDVRAAGELACGVSEGVPGFSNPNSEGVWTGLDADICRAVAAATLGDANAVRFVPLA 83 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 +K++ LA+ S Q+D+ SR T WT+ R+ + G+ F + Y+DGQGF++ G++S +L Sbjct: 84 SKQKVLAVSSGQVDMTSRTTTWTMKRDSAEGVDFTSVVYYDGQGFMVRADAGVTSARELD 143 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 A++C+ GTTTEL +AD+ +A+ + P+VFE E AY + RCDA T D S L A Sbjct: 144 AATVCLTTGTTTELNMADFARANGLTLEPVVFEGKREAVEAYASGRCDALTTDASQLAAF 203 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 + PSEH ILP+IISK PLAP + GD +W +IV+W Y ++TAEELG+TQ N+ ++ Sbjct: 204 RAGFADPSEHKILPEIISKEPLAPFVAHGDNQWKDIVTWVVYGLITAEELGVTQANVAEM 263 Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324 + +TNP++QR LG S + G LGL W I +GNYGE++DRNL + L + R Sbjct: 264 TASSTNPNIQRLLGT--SGDTGGFLGLNSTWMVDTISAVGNYGEIYDRNL--TATLGLER 319 Query: 325 GYNALWSKGGLMYAPPIR 342 G NALW+ GG++YA P+R Sbjct: 320 GVNALWTDGGILYAMPVR 337 >gi|326204744|ref|ZP_08194599.1| extracellular solute-binding protein family 3 [Clostridium papyrosolvens DSM 2782] gi|325985115|gb|EGD45956.1| extracellular solute-binding protein family 3 [Clostridium papyrosolvens DSM 2782] Length = 363 Score = 366 bits (939), Expect = 3e-99, Method: Composition-based stats. Identities = 137/365 (37%), Positives = 208/365 (56%), Gaps = 27/365 (7%) Query: 1 MYKDF-------FVSILCLIILFFTSFSTN-----------------ASILGDIKKRGFL 36 M K F +L +L T S++ SIL +K RG + Sbjct: 1 MRKIFNAKALGKVAMLLVASVLVVTGCSSSNEQSDTSGKSGTKGQGSESILQKVKARGKV 60 Query: 37 KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96 G +T L GF ++ +G + GFD++ +A ++AI DP+ + P+ + RF ALQ+ + Sbjct: 61 YIGCDTVLPGFGFLETDGKYSGFDIEIGKAFAAAILGDPNAAEMKPVTGQTRFTALQTGE 120 Query: 97 IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT 156 IDILSR T ++ R+ +LG+ F P ++DGQG ++ K K + + L G I V+ GTTT Sbjct: 121 IDILSRATTMSITRDTTLGIRFLPTDFYDGQGIMVKKNKNVKTFKDLDGMRIGVEQGTTT 180 Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216 E + A K + +VFE + I +AY A DA+T D S L + + EH I Sbjct: 181 EKNVTTKLAAVGAKANIVVFENQDSIVSAYEAGSIDAWTSDKSGLVSRLAGMSKQDEHAI 240 Query: 217 LPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRF 276 L + +SK PL PAI GD +W+N+ WT YA++ AEELGITQ N+ ++ K + +P ++ Sbjct: 241 LEETLSKEPLTPAIKAGDDQWFNVTRWTLYALMQAEELGITQANVEEMVK-SDDPSIRSL 299 Query: 277 LGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLM 336 LG + ++G+ LGL+ DW ++I+ +GNYGE+++R LG S K+ RG NALW+ GGLM Sbjct: 300 LGAEG--DLGKNLGLSNDWVVKLIKGVGNYGEIYERTLGQGSAFKLDRGLNALWTDGGLM 357 Query: 337 YAPPI 341 Y+PP Sbjct: 358 YSPPF 362 >gi|33240126|ref|NP_875068.1| amino acid ABC transporter periplasmic protein [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33237653|gb|AAP99720.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 350 Score = 365 bits (937), Expect = 5e-99, Method: Composition-based stats. Identities = 141/351 (40%), Positives = 218/351 (62%), Gaps = 12/351 (3%) Query: 1 MY-KDFFVSILCLIILFFTSFST---NASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K FF ++ L IL ST NAS L IKKR L CG++ + GF+ ++ +G + Sbjct: 1 MKIKRFFSGMMTLSILLTGCASTGERNASRLQLIKKRNSLICGVSGKIPGFSFLETDGTY 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI--SL 114 +G D+D C+A ++A D ++QY PL A ERF A+++ +ID+LSRNT + L R+ Sbjct: 61 QGLDIDICKAFAAAFIGDSKRVQYRPLTAAERFTAVRTGEIDLLSRNTTFNLSRDSIGGN 120 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 GL F P+ + DGQG ++ + I+++ L+ SICV +GTTTE + D F+A ++ Y PI Sbjct: 121 GLTFAPVIFHDGQGLMVKRNSRINTIESLANKSICVGSGTTTEQNINDAFEAISLPYTPI 180 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 ++ + ++ A Y RC A T D S L A + +P +H+IL DI+SK PLAPA GD Sbjct: 181 KYQDLNQVVAGYLQGRCSAMTSDRSQLAAARSGFPKPEDHIILNDILSKEPLAPASSGGD 240 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSK-DTTNPD---VQRFLGIDKSSNIGEALG 290 + + + W +++++AEE GIT+ NI + + NP ++RFLG++ ++GE +G Sbjct: 241 QKLSDAMRWVIFSLISAEEQGITKGNIKEKLQIAQNNPQMKSLRRFLGVEG--DLGEKIG 298 Query: 291 LTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341 L D+ ++I GNYGE+++R+LG SE+ IPRG N L++KGG+ APP Sbjct: 299 LANDFVVKVISSTGNYGEIYNRHLGINSEVPIPRGLNKLYNKGGVQIAPPF 349 >gi|323136410|ref|ZP_08071492.1| extracellular solute-binding protein family 3 [Methylocystis sp. ATCC 49242] gi|322398484|gb|EFY01004.1| extracellular solute-binding protein family 3 [Methylocystis sp. ATCC 49242] Length = 345 Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats. Identities = 154/346 (44%), Positives = 217/346 (62%), Gaps = 10/346 (2%) Query: 3 KDFFVSILCLIILFFTSFSTN------ASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 + FF+++ ++ + L +I KRGF+ CG T GFAE +W Sbjct: 4 RRFFLAVALAVMCALAAAQDAEAQIEIGPTLSEILKRGFVICG-MTEADGFAEPLDGNEW 62 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +GFDVD CRAL+SAIFDDP+K+ Y L AKER +LQ +D+L+ WT R+ + Sbjct: 63 RGFDVDICRALASAIFDDPTKVMYSALPAKERAASLQGNWVDLLASGAPWTQSRDTGQRI 122 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + ++ +DGQ F++ +++ +S LSG S+CVQ GT+ ELTLAD+F Y P F Sbjct: 123 IYAGVSLYDGQTFLVRRQRSFASARDLSGVSVCVQRGTSYELTLADFFNVRKAPYEPRAF 182 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E EE A Y A +CDA T D S LYA + P++H +LPD++SK+P P + QGD + Sbjct: 183 ETFEEAAAGYEAGKCDALTADASMLYAARAKFASPADHAVLPDMLSKAPRGPVVRQGDDQ 242 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWT 296 W NIV WT YAM+ AEEL ++ N + K + NPD++R +G+D ++G LGL K+W Sbjct: 243 WLNIVRWTLYAMINAEELQVSILNADLALK-SENPDIRRLVGVDG--DLGAGLGLAKNWA 299 Query: 297 YRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +RII+H+GNYG+MFDRNLG + + + R NALWS GGLMYAPP+R Sbjct: 300 FRIIKHIGNYGDMFDRNLGPATPMAMDRRINALWSNGGLMYAPPVR 345 >gi|116070918|ref|ZP_01468187.1| extracellular solute-binding protein, family 3 [Synechococcus sp. BL107] gi|116066323|gb|EAU72080.1| extracellular solute-binding protein, family 3 [Synechococcus sp. BL107] Length = 371 Score = 364 bits (934), Expect = 1e-98, Method: Composition-based stats. Identities = 140/340 (41%), Positives = 203/340 (59%), Gaps = 8/340 (2%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 ++ L+ T S L ++ RG L CG++ + GF+ + +G + G DVD C+A+ Sbjct: 33 GLIGLLCGCATLGDGTDSRLNLVQTRGELLCGVSGKIPGFSFLSPDGRYAGLDVDVCKAM 92 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS--LGLAFRPITYFD 125 ++A D +K+QY PL A ERF AL+S +ID+LSRNT TL R+ + GL+F P + D Sbjct: 93 AAAFVGDSTKVQYRPLTAPERFTALRSGEIDLLSRNTTHTLSRDAAGGNGLSFAPTVFHD 152 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 GQG ++ G S++ LSG +ICV +GTTTE L D F A + Y PI ++ + ++ Sbjct: 153 GQGLMVSVGSGARSMADLSGKAICVGSGTTTEQNLNDAFAAQGLPYTPIKYQDLNQVVGG 212 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 Y RC A T D S L + + P +HVIL D +SK PLAPA++ GD + +W Sbjct: 213 YLQGRCAAMTSDRSQLASARSGFKDPQQHVILEDRLSKEPLAPAVVGGDQRMADATNWVV 272 Query: 246 YAMVTAEELGITQKNINQVSK----DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301 YA++ AEE GITQ N++ V + D + ++RFLG+D +G LGL D+ ++IR Sbjct: 273 YALIEAEERGITQANLDDVLERAVADPSQAALRRFLGVDG--GLGAKLGLPDDFVVQVIR 330 Query: 302 HMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341 GNYGE+++R+LG S + IPRG N L GGLM APP Sbjct: 331 ATGNYGEIYNRHLGPGSAVTIPRGPNRLGRDGGLMIAPPF 370 >gi|296536952|ref|ZP_06898974.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Roseomonas cervicalis ATCC 49957] gi|296262721|gb|EFH09324.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Roseomonas cervicalis ATCC 49957] Length = 338 Score = 363 bits (933), Expect = 2e-98, Method: Composition-based stats. Identities = 135/322 (41%), Positives = 213/322 (66%), Gaps = 7/322 (2%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 + + L ++ RG L CG++ GFA + G+ +G + DFCRA+++A D +++++ Sbjct: 23 SGSPTLDAVRARGQLACGVSGTNPGFALADSRGEMRGSEADFCRAVAAATLGDAGRVKFV 82 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 L + RF ALQS +ID+L R W+L RE SLGL F IT+ DG F++H G+ S + Sbjct: 83 VLTSTNRFTALQSGEIDLLVRTATWSLGREASLGLLFAGITFHDGTAFMVHAASGVRSAA 142 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 +L GA+IC+ GTTTEL + DYF+ M++ P++ + V E+ AA+R+ RCD+Y+ D SAL Sbjct: 143 ELDGATICILPGTTTELAVTDYFRRGGMRFTPVLIDNVTELRAAFRSGRCDSYSSDASAL 202 Query: 202 YALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 + + ++ +LP++ISK PL P + +GD +W++IV WTH+AM+ AEELGI + Sbjct: 203 ASFRFGEGAGAGQYALLPEVISKEPLGPLVRKGDDKWFDIVRWTHFAMLAAEELGIRGAD 262 Query: 261 INQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSEL 320 + + + NPD++R LG+D ++G A+GL W + I+R +GNY E++DRN+ + L Sbjct: 263 A-EAALASPNPDIRRLLGVDG--DLGRAMGLDNRWAFNILRQVGNYAEVWDRNI---APL 316 Query: 321 KIPRGYNALWSKGGLMYAPPIR 342 +PRG+N +W++GGL YAPPIR Sbjct: 317 GVPRGHNRIWTQGGLQYAPPIR 338 >gi|260545549|ref|ZP_05821290.1| cationic amino acid ABC transporter [Brucella abortus NCTC 8038] gi|260096956|gb|EEW80831.1| cationic amino acid ABC transporter [Brucella abortus NCTC 8038] Length = 266 Score = 363 bits (932), Expect = 2e-98, Method: Composition-based stats. Identities = 150/266 (56%), Positives = 199/266 (74%), Gaps = 3/266 (1%) Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--G 136 ++ PLNAKERF A QS ++D+L RNT WT+ R+ SLGL F I Y+DGQGF+++ KK G Sbjct: 2 KFTPLNAKERFTAFQSGEVDVLIRNTTWTISRDTSLGLDFAGINYYDGQGFMINSKKLAG 61 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 I+S QLSGASICVQAGTTTEL +ADYF+A+ M+Y+P+VFE++EE +AAY + RCDAYT Sbjct: 62 INSALQLSGASICVQAGTTTELNMADYFRANKMEYNPVVFEKIEEANAAYDSGRCDAYTT 121 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 D S+LY ++L P +HVILP+IISK P + QGD W ++V WTH A++ AEE GI Sbjct: 122 DQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDARWADVVRWTHNALLNAEEYGI 181 Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316 TQ N+ ++ K + NPD++R LG + + IG LGL KDW +II+ +GNYGE+F+RN+G+ Sbjct: 182 TQANVEEMKK-SDNPDIKRLLGAEADTKIGTDLGLDKDWVVKIIKGVGNYGEIFERNIGS 240 Query: 317 QSELKIPRGYNALWSKGGLMYAPPIR 342 S LKI RG NA W+KGGL Y P+R Sbjct: 241 GSPLKIARGLNAQWNKGGLQYGIPVR 266 >gi|78779551|ref|YP_397663.1| extracellular solute-binding protein [Prochlorococcus marinus str. MIT 9312] gi|78713050|gb|ABB50227.1| amino acid ABC transporter substrate-binding protein, PAAT family [Prochlorococcus marinus str. MIT 9312] Length = 349 Score = 362 bits (930), Expect = 4e-98, Method: Composition-based stats. Identities = 141/350 (40%), Positives = 209/350 (59%), Gaps = 11/350 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS---ILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M F I +L S L I++R L CG++ + GF+ ++ +G +K Sbjct: 1 MMNRLFFGIAAFGLLLTGCASNQNDNISRLSLIQERDELICGVSGKIPGFSFIERDGSYK 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI--SLG 115 G DVD C+A ++AI D KIQ+ PL A ERFLA+++ ID+LSRNT TL R+ G Sbjct: 61 GLDVDICKAFAAAIIGDSEKIQFRPLTAAERFLAIKTGDIDLLSRNTTLTLSRDSFGGNG 120 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 L F P+ + DGQG ++ K GI S+ +L+ SICV +GTTTE + D F++ ++ Y PI Sbjct: 121 LTFAPVVFHDGQGLMVKKNSGIESIQELANKSICVGSGTTTEQNINDTFESLSLPYVPIK 180 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 ++ + ++ A Y RC A T D S L A + +H+IL D++SK PLAPA + Sbjct: 181 YQDLNQVVAGYLQGRCQAMTSDRSQLAAARSGFKNAKDHIILDDVLSKEPLAPASDGSEQ 240 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNI-NQVSKDTTNPD---VQRFLGIDKSSNIGEALGL 291 + + + WT +A++ AEE GITQ NI +++ NP ++RFLG+D +GE +GL Sbjct: 241 KLADAMRWTVFALIAAEEQGITQSNIADRLQLAKNNPQLKSLRRFLGVDG--GLGEKIGL 298 Query: 292 TKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341 D+ +I+ GNYGE++DRNLG S++ IPRG N ++SKGGL +PP Sbjct: 299 RNDFVVNVIKATGNYGEIYDRNLGIDSDVPIPRGLNEIYSKGGLHISPPF 348 >gi|317407537|gb|EFV87488.1| extracellular solute-binding protein, family 3 [Achromobacter xylosoxidans C54] Length = 329 Score = 359 bits (921), Expect = 5e-97, Method: Composition-based stats. Identities = 124/325 (38%), Positives = 194/325 (59%), Gaps = 5/325 (1%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 + TN+ + I+ RG++ CG G GF+ +G+WKG DVD CRA++ A+ D Sbjct: 5 VAAAVTQTNSPTVDQIRARGYVICGSGHGTTGFSAPDKDGNWKGLDVDTCRAIAIAVLGD 64 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 SK +++PL ++R ALQ+ QID+L R T WTL R+ + G+ F Y++ F++ K Sbjct: 65 ASKTRFVPLTGQQRLTALQTGQIDVLPRTTSWTLRRD-ANGINFTYPNYYEYDAFMVRKD 123 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 GI+ ++GA+ICVQ G+T E+T+AD + + ++F+ V A+ + RCD Sbjct: 124 LGITQTKDMNGATICVQTGSTNEVTVADLSRKFKLGLKTVLFDNVAASRQAFFSGRCDGL 183 Query: 195 TGDISALYALKLT-NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 D SAL A++ T P ++VI P L P++ GD W++IV W + AE+ Sbjct: 184 ITDASALAAVRATQAQNPDDYVIFPASGHSEALTPSVRHGDDRWFDIVKWVIQVPIAAED 243 Query: 254 LGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRN 313 +GITQ N++ + K + +P + RFLG + + G+ALGL + W Y I++ +GNYGE+F+RN Sbjct: 244 MGITQANVDDMLK-SDDPRIARFLGKEPGN--GKALGLDERWAYNIVKQLGNYGEIFERN 300 Query: 314 LGNQSELKIPRGYNALWSKGGLMYA 338 +G S +K+ RG N L+ GGLMY Sbjct: 301 VGKNSPMKLERGMNRLYRDGGLMYP 325 >gi|309791547|ref|ZP_07686046.1| extracellular solute-binding protein [Oscillochloris trichoides DG6] gi|308226407|gb|EFO80136.1| extracellular solute-binding protein [Oscillochloris trichoides DG6] Length = 404 Score = 358 bits (918), Expect = 9e-97, Method: Composition-based stats. Identities = 132/338 (39%), Positives = 206/338 (60%), Gaps = 9/338 (2%) Query: 11 CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSS 69 ++ T ++ +L +K RG L CG N L GF G W GFDVDFCRAL++ Sbjct: 70 LTVVAEATPTPASSGLLERVKARGKLICGTNADLPGFGFYDNVRGRWSGFDVDFCRALAA 129 Query: 70 AIFDDPSKIQYLPLNAK---ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 AIF D ++++ LN ERF +++S ++D+L RNT WTL R++S LAF P T+ DG Sbjct: 130 AIFADADAVEFVALNTSGQNERFESVRSGKVDVLFRNTTWTLGRDLS-QLAFGPTTFHDG 188 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 Q F++ I+S++ L+G ICV GTT+ L+D F A + + ++++ ++ AY Sbjct: 189 QTFMVRTASQITSLNDLAGKKICVSRGTTSAQNLSDDFAARGIVFEQVLYDDENQLYPAY 248 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 CDA T D S L + + T +RP +H IL + IS+ PL PA I+ D +W ++V+W + Sbjct: 249 DQGACDAVTSDSSQLASKRQTLERPEDHTILGERISREPLGPAFIEHDEQWRDVVTWVVF 308 Query: 247 AMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNY 306 A + AEEL + Q N+ Q+ ++T+P V+R LG++ + G +LGL D+ Y+IIR +GNY Sbjct: 309 ATMYAEELRVDQTNVEQMKANSTDPRVRRLLGLEG--DFGTSLGLNNDFGYQIIRLVGNY 366 Query: 307 GEMFDRNLGNQSELKIPRGYNALWS--KGGLMYAPPIR 342 ++++RNLG + + RG N W+ GG++ +PP R Sbjct: 367 ADIYNRNLGPTTPFAMDRGPNKAWNLGAGGVLASPPFR 404 >gi|300022607|ref|YP_003755218.1| extracellular solute-binding protein family 3 [Hyphomicrobium denitrificans ATCC 51888] gi|299524428|gb|ADJ22897.1| extracellular solute-binding protein family 3 [Hyphomicrobium denitrificans ATCC 51888] Length = 344 Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats. Identities = 145/347 (41%), Positives = 212/347 (61%), Gaps = 8/347 (2%) Query: 1 MYKDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M + L L I + AS++ I+KRG + CG++ GF+E+ +G Sbjct: 1 MKIAMRCAALILAIGSMVGGFCGPAWSEASLIDTIRKRGHVVCGVSERAPGFSEISGSGT 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 WKGFDV+FC AL++A+ + +++L L ++F AL+ +ID+L T WTL R+ LG Sbjct: 61 WKGFDVEFCSALAAAVLGNKDSVKFLSLMPSDKFNALRDNEIDVLMGATSWTLTRDTELG 120 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F Y+DGQGFI+ + ISSV +LSGASICV G+T +ADYF A M+Y I Sbjct: 121 ARFVAALYYDGQGFIVPRNHSISSVLELSGASICVLPGSTDASAVADYFGARRMRYQLIT 180 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 +R +E+ Y + C TGD+S L + ++ ++LP+ ISK PL PA+ G Sbjct: 181 SDRWDELVKTYSSGGCTVLTGDLSLLAYERSRLANGADQMLLPEYISKEPLGPAVKVGRD 240 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDW 295 W+ +V WT+ A+V AEELGI N+ ++ K + + DV+RFLG++ +IG LGL +DW Sbjct: 241 SWFAVVRWTYMALVAAEELGINSSNV-EMMKVSPSHDVRRFLGLEA--DIGAPLGLARDW 297 Query: 296 TYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 Y+++R +GNY E+FDR LG S LK+ RG N LW+KGGLMY+ P+R Sbjct: 298 AYQVVRQVGNYAEIFDRTLGQGSALKLDRGLNNLWTKGGLMYSVPMR 344 >gi|301166613|emb|CBW26189.1| General L-amino acid substrate binding protein [Bacteriovorax marinus SJ] Length = 347 Score = 356 bits (913), Expect = 4e-96, Method: Composition-based stats. Identities = 142/333 (42%), Positives = 205/333 (61%), Gaps = 4/333 (1%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 + L TS S AS + +IKKRG L CG++ GL GF+ G+WKGFDVD C+A++ Sbjct: 19 IIFTFLLLTSLS-WASTISEIKKRGHLNCGVSEGLTGFSIPNEKGEWKGFDVDICKAIAV 77 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 AIF+D K++++P + ERF +L KQIDILSRNT T RE++ + F P+ YFD QG Sbjct: 78 AIFNDTQKVKFIPTSLGERFNSLAKKQIDILSRNTSRTFSREVTRDIEFAPVVYFDTQGI 137 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 ++ K+ I + L ICV+ TTT+ L DYFK HN++ + F+ +++ + Sbjct: 138 LVSKRSKIKKIKDLDNKKICVKNNTTTQQNLIDYFKHHNLRLRQVRFDNNDQLVLGFLKK 197 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 RC A T D++ L + K +L + I K PLAP I+ GD W N+V WT Y+++ Sbjct: 198 RCIALTSDVTTLISEKNHFQNSKSFTLLSERIEKEPLAPVILSGDRRWKNLVDWTIYSLI 257 Query: 250 TAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEM 309 AEELG++ NI + K + +P V+RF G + N + LG++ WT II +GNY E+ Sbjct: 258 WAEELGVSSSNIEAM-KTSADPRVKRFFG--EGFNFEKMLGVSNGWTGNIISKIGNYSEV 314 Query: 310 FDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 F RNLG S LKIPRG N+LW GG++Y+PP++ Sbjct: 315 FHRNLGRDSNLKIPRGLNSLWKDGGILYSPPMK 347 >gi|116072941|ref|ZP_01470203.1| ABC transporter for amino acids, substrate binding protein [Synechococcus sp. RS9916] gi|116068246|gb|EAU73998.1| ABC transporter for amino acids, substrate binding protein [Synechococcus sp. RS9916] Length = 349 Score = 354 bits (908), Expect = 1e-95, Method: Composition-based stats. Identities = 141/351 (40%), Positives = 209/351 (59%), Gaps = 11/351 (3%) Query: 1 MYKDFFVSILCLIILF---FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M+ +L +++ T AS LG I++R L+CG++ + GF+ ++ NG + Sbjct: 1 MHFRTLSGLLAGVLMLQGCATLGEGGASRLGLIQQRKSLRCGVSGKIPGFSFLRPNGSYS 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS--LG 115 G DVD C+A ++A D + ++Y PL A ERF AL++ +ID+LSRNT + L R+ + G Sbjct: 61 GLDVDLCKAFAAAFVGDATAVEYRPLTAPERFTALRTGEIDLLSRNTTFNLSRDAAGGNG 120 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 ++F P+ + DGQG I+ K GI ++ L SICV +GTTTE L D +A + Y PI Sbjct: 121 VSFAPVVFHDGQGLIVKKTSGIRQLTDLRNQSICVGSGTTTEQNLNDALEAQGIAYTPIK 180 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 ++ + ++ A Y RC A T D S L A + P EHVIL ++SK PLAP + GD Sbjct: 181 YQDLNQVVAGYLQDRCSAMTSDRSQLAAARSGFANPQEHVILNAVLSKEPLAPLSVGGDQ 240 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQ-VSKDTTNP---DVQRFLGIDKSSNIGEALGL 291 + + W YA++TAEELG+TQ N+ + ++K NP ++RFLG+D +G LGL Sbjct: 241 RLGDAMRWVVYALITAEELGLTQANVQERLAKAQNNPQMTQLRRFLGVDGE--LGTKLGL 298 Query: 292 TKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 D+ R+I GNYGE+++R+LG S + IPRG N L GG M APP + Sbjct: 299 APDFVVRVIEATGNYGEIYNRHLGPDSAVPIPRGLNQLHRDGGAMTAPPFQ 349 >gi|87124569|ref|ZP_01080418.1| ABC transporter for amino acids, substrate binding protein [Synechococcus sp. RS9917] gi|86168141|gb|EAQ69399.1| ABC transporter for amino acids, substrate binding protein [Synechococcus sp. RS9917] Length = 343 Score = 353 bits (907), Expect = 2e-95, Method: Composition-based stats. Identities = 134/333 (40%), Positives = 199/333 (59%), Gaps = 8/333 (2%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 T AS L I++RG L+CG++ + GF+ ++ +G + G DVD C+A ++A + Sbjct: 13 CATLGEGGASRLDLIRQRGSLRCGVSGKIPGFSYLQTDGRYFGLDVDLCKAFAAAFVPET 72 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS--LGLAFRPITYFDGQGFIMHK 133 + Y PL A ERF AL++ +ID+LSRNT L R+ + GL+F P+ + DGQG ++ Sbjct: 73 GAVDYRPLTAPERFTALRTGEIDLLSRNTTMNLSRDAAGGNGLSFAPVVFHDGQGLMVSS 132 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 GI + L G SICV +GTTTE L D F+A + Y PI ++ + ++ A Y RC A Sbjct: 133 GSGIKRLEDLQGKSICVGSGTTTEQNLNDAFEARGIAYTPIKYQDLNQVVAGYLQGRCQA 192 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 T D S L A + H IL +++SK PLAPA + GD + + W YA++TAEE Sbjct: 193 MTSDRSQLAAARSGFADQRNHRILEEVLSKEPLAPASVGGDQRLADAMRWVVYALITAEE 252 Query: 254 LGITQKNINQVSKDTT-NPD---VQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEM 309 LGITQ N+ + + P+ ++RF G+ ++ +GE LGL D+ ++I+ GNYGE+ Sbjct: 253 LGITQANVQERYAEAQRRPELTRLRRFFGL--NAGLGETLGLRDDFVVQVIQATGNYGEI 310 Query: 310 FDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + RNLG S++ IPRG N L GG+M APP + Sbjct: 311 YARNLGPDSQVPIPRGLNRLGRDGGVMVAPPFQ 343 >gi|103487895|ref|YP_617456.1| extracellular solute-binding protein [Sphingopyxis alaskensis RB2256] gi|98977972|gb|ABF54123.1| extracellular solute-binding protein, family 3 [Sphingopyxis alaskensis RB2256] Length = 365 Score = 348 bits (894), Expect = 5e-94, Method: Composition-based stats. Identities = 126/324 (38%), Positives = 199/324 (61%), Gaps = 6/324 (1%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 + S L I+ RG L C I+TG +G + + G W+GF VD+CRAL++A+ D K++ Sbjct: 47 AAAKGSTLARIRARGTLNCAIHTGQLGMSYLDKRGRWQGFFVDYCRALAAAVLGDARKVR 106 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 ++P+ + +RF +Q+ + D+LSR T WTL R+ LG+ F Y+DGQ F++ ++ G+ Sbjct: 107 FMPVASNKRFTIVQTGEADVLSRTTTWTLTRDTDLGVNFVGTMYYDGQSFLVPRRSGVRL 166 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L GASIC+ GTT+EL A+YF+ +++ +VFE EE A+ A RCDA T D Sbjct: 167 PTDLDGASICITKGTTSELNTAEYFERKGLRFLSVVFENPEEAKLAFFAGRCDAMTTDAF 226 Query: 200 ALYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 L ++L + P ++V+LP+ ++K P+ P + D +WY I W A+ AEE+G+T+ Sbjct: 227 TLTVIRLADTAHPDDYVVLPERLTKEPVGPVVRSDDEQWYEINKWVLNALFAAEEMGVTR 286 Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318 N ++ + +P+V++ LG G++LGL DW YR I GNYGE+FDR++ + Sbjct: 287 ANAARMRMASRDPEVRKMLG--GLPGFGKSLGLDDDWAYRAIEATGNYGEIFDRHI---T 341 Query: 319 ELKIPRGYNALWSKGGLMYAPPIR 342 L + RG N L+ GGL+Y P+R Sbjct: 342 PLGVERGQNKLYRDGGLIYPLPMR 365 >gi|209549223|ref|YP_002281140.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209534979|gb|ACI54914.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 344 Score = 346 bits (889), Expect = 2e-93, Method: Composition-based stats. Identities = 121/341 (35%), Positives = 198/341 (58%), Gaps = 8/341 (2%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDV 61 K + + FT+ +ASIL +K+RG L CG + GF + G +G DV Sbjct: 5 KILIAGVFA--GMAFTATHASASILDTVKQRGVLNCGTDNTAPGFGYLNTTTGQMEGLDV 62 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 DFC+A+++++ D +KI+++ + K RF A+ + Q+D++ +T RE S+ + F PI Sbjct: 63 DFCKAVAASVLGDAAKIKFITVTDKSRFDAVLTGQVDVVFAHTTIKPARESSIAIDFLPI 122 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK-YHPIVFERVE 180 ++DG G ++ GI + L GA+IC G+ TE LA FKA K + +E +E Sbjct: 123 NFYDGTGLMVKADAGIKEFADLDGATICTTQGSATETVLAAAFKARGWKDSKVLTYENLE 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + +A + RC+A + D SAL A +P++++ILPD + KSP ++ D++W N Sbjct: 183 KFFSALNSGRCNAMSTDKSALAAWAGNAPKPADYLILPDTLDKSPFGGFVVANDSKWRNA 242 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 + W Y + AEE GITQ N+ + K + +P VQ+FLG + G+ GL+ D+ + I Sbjct: 243 LRWIEYGLFQAEESGITQANLAEKLK-SEDPFVQKFLGSNGG-GYGKDFGLSDDFIAQAI 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPR--GYNALWSKGGLMYAP 339 + +GNYGE +DRNLG ++++ + R NALW++GG +Y+P Sbjct: 301 KAVGNYGEAYDRNLGPKTKMYLDRKGTPNALWTQGGAIYSP 341 >gi|190891654|ref|YP_001978196.1| putative amino acid ABC transporter, substrate-binding protein [Rhizobium etli CIAT 652] gi|190696933|gb|ACE91018.1| putative amino acid ABC transporter, substrate-binding protein [Rhizobium etli CIAT 652] Length = 343 Score = 346 bits (888), Expect = 3e-93, Method: Composition-based stats. Identities = 119/343 (34%), Positives = 198/343 (57%), Gaps = 7/343 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 M F++ + FT+ + +AS+L +K+RG L CG + GF + G +G Sbjct: 1 MKLLKFLTAGVFAGVAFTAANASASVLDTVKQRGVLNCGTDNTAPGFGYLNTTTGQMEGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVDFC+A+++ + D SK++++ + K RF A+ + Q+D++ +T RE S+ + F Sbjct: 61 DVDFCKAVAAGVLGDASKVKFITVTDKSRFDAVLTGQVDVVFAHTTIKPARESSIAIDFL 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK-YHPIVFER 178 PI ++DG G ++ GI + L GA+IC G+ TE LA FKA K + +E Sbjct: 121 PINFYDGTGLMVKTDAGIKEFADLDGATICTTQGSATETVLAAAFKARGWKDSKVLTYEN 180 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +E++ +A + RC+A + D SAL A +P++++ILPD + KSP + D++W Sbjct: 181 LEKLFSALNSGRCNAMSTDKSALAAWAGNAPKPADYLILPDTLDKSPFGGFVAANDSKWR 240 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298 N + W Y + AEE ITQ N+ + K + +P +Q+FLG+ G+ GL+ D+ + Sbjct: 241 NALRWIEYGLFQAEESEITQANLAEKLK-SEDPFIQKFLGV--GGGYGKDFGLSDDFIAQ 297 Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPR--GYNALWSKGGLMYAP 339 I+ +GNYGE +DRNLG +++ + R NALW++GG +Y+P Sbjct: 298 AIKAVGNYGEAYDRNLGPTTKMYLDRKGTPNALWTQGGAIYSP 340 >gi|254707031|ref|ZP_05168859.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella pinnipedialis M163/99/10] Length = 251 Score = 345 bits (885), Expect = 6e-93, Method: Composition-based stats. Identities = 141/252 (55%), Positives = 188/252 (74%), Gaps = 3/252 (1%) Query: 93 QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICV 150 QS ++D+L RNT WT+ R+ SLGL F I Y+DGQGF+++ KK GI+S QLSGASICV Sbjct: 1 QSGEVDVLIRNTTWTISRDTSLGLDFAGINYYDGQGFMINSKKLAGINSALQLSGASICV 60 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 QAGTTTEL +ADYF+A+ M+Y+P+VFE++EE +AAY + RCDAYT D S+LY ++L Sbjct: 61 QAGTTTELNMADYFRANKMEYNPVVFEKIEEANAAYDSGRCDAYTTDQSSLYGVRLALAN 120 Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 P +HVILP+IISK P + QGD W ++V WTH A++ AEE GITQ N+ ++ K + N Sbjct: 121 PDDHVILPEIISKEPFGLTVRQGDARWADVVRWTHNALLNAEEYGITQANVEEMKK-SDN 179 Query: 271 PDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALW 330 PD++R LG + + IG LGL KDW +II+ +GNYGE+F+RN+G+ S LKI RG NA W Sbjct: 180 PDIKRLLGAEADTKIGTDLGLDKDWVVKIIKGVGNYGEIFERNIGSGSPLKIARGLNAQW 239 Query: 331 SKGGLMYAPPIR 342 +KGGL Y P+R Sbjct: 240 NKGGLQYGIPVR 251 >gi|144898062|emb|CAM74926.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Magnetospirillum gryphiswaldense MSR-1] Length = 340 Score = 345 bits (885), Expect = 7e-93, Method: Composition-based stats. Identities = 121/346 (34%), Positives = 198/346 (57%), Gaps = 10/346 (2%) Query: 1 MYKDFFVSILC---LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K ++ L LI T A L ++ RG ++CG++ + NG W Sbjct: 1 MLKRIAIAALTALPLIAGLTTPPQARAGTLEEVTARGVIRCGVSEYGPALTAMNENGQWA 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GF DFCRA ++A + + ++ +++ +RF AL+ K +D+LS + WT R++ GLA Sbjct: 61 GFYTDFCRAFAAATLGNARAVDFVSVSSLDRFEALRQKAVDVLSEASTWTSERDLG-GLA 119 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F + DGQGF++ + GIS + QL G ICV + T+ L K N+ + + Sbjct: 120 FPATSMMDGQGFLVRRDGGISGLDQLKGRRICVISHATSVGGLNRVNKVRNLGFKIQEYS 179 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLT-NDRPSEHVILPDIISKSPLAPAIIQGDTE 236 ++ AA+ +CDA + D L +L+ P+++V+LP+ I++ PL+P +++ D Sbjct: 180 SIQGSFAAFFDRQCDAVSTDGIILASLRQQLAPNPADYVLLPERITREPLSPVVLKNDRR 239 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWT 296 W +I+ WT A + AEELGIT N+ Q ++T+P+++R LG+D ++G LGL K W Sbjct: 240 WEDIIRWTILATIAAEELGITSANVKQHL-NSTDPEIRRLLGLDG--DMGARLGLDKAWA 296 Query: 297 YRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 R+I +GNYGE+++RNL L + RG NAL S+GG++++PP R Sbjct: 297 MRVIEQVGNYGEIYNRNLTK--VLGLERGQNALSSQGGILWSPPFR 340 >gi|186470673|ref|YP_001861991.1| extracellular solute-binding protein [Burkholderia phymatum STM815] gi|184196982|gb|ACC74945.1| extracellular solute-binding protein family 3 [Burkholderia phymatum STM815] Length = 345 Score = 342 bits (878), Expect = 4e-92, Method: Composition-based stats. Identities = 138/328 (42%), Positives = 201/328 (61%), Gaps = 7/328 (2%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 + + + L IK RG L+CGI+ G+ GF+ G + G D DFCRA+++A+ DP Sbjct: 24 SAVATAAGSETLAHIKARGTLRCGISEGIAGFSAADGAGHFSGIDADFCRAVAAAVLGDP 83 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 +K+ ++PL A RF AL++ +ID+L+RNT WTLLRE +LG+ F I ++D Q F++ +K Sbjct: 84 NKVTFVPLKASARFPALRTDRIDLLARNTTWTLLREGTLGIQFAGILFYDAQAFMVSRKN 143 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 G +S S L+GA++CVQ TT+E L Y A+++ P+V V E+ A+ + RC A T Sbjct: 144 GTAS-SSLNGATVCVQQDTTSERNLMGYASANSLNVKPLVVGSVPELAQAFFSGRCSAAT 202 Query: 196 GDISALYALKLTNDRPSEHV-ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D S L LK + V ILP+ +SK PL PA+ D W +V W + ++TAEEL Sbjct: 203 ADASLLSVLKSRAPGGASTVEILPERLSKQPLGPAVRGDDDAWLVVVRWVLFTLITAEEL 262 Query: 255 GITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNL 314 G+T++N + +P V R L D + + LG+ WT R ++ GNYGEMF+RNL Sbjct: 263 GVTRENY---AARVRDPLVARALVPDAT--VTATLGIEPGWTLRALQSAGNYGEMFERNL 317 Query: 315 GNQSELKIPRGYNALWSKGGLMYAPPIR 342 G S L + RG N LW+ GGLMYAPP++ Sbjct: 318 GAGSPLGLERGLNNLWTHGGLMYAPPMQ 345 >gi|150397299|ref|YP_001327766.1| extracellular solute-binding protein [Sinorhizobium medicae WSM419] gi|150028814|gb|ABR60931.1| extracellular solute-binding protein family 3 [Sinorhizobium medicae WSM419] Length = 343 Score = 342 bits (878), Expect = 4e-92, Method: Composition-based stats. Identities = 117/343 (34%), Positives = 194/343 (56%), Gaps = 7/343 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 M ++ L T+ +AS+L +K+RG L CG + GF + G +G Sbjct: 1 MKLIKLLTAGVFAGLAVTTGQASASVLDTVKQRGTLNCGTDNTAPGFGYLNTTTGQMEGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVDFCRA+++A+ D SK++++ + K RF A+ + Q+D++ +T RE S+ + F Sbjct: 61 DVDFCRAVAAAVLGDASKVKFVTVTDKSRFDAVLTNQVDVVFAHTTMKPARESSIAIDFL 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK-YHPIVFER 178 P+ ++DG G ++ + + L GA+ C G+ TE L FKA+ + + +E Sbjct: 121 PVNFYDGTGIMVKTDSEVVQFADLEGATFCTTQGSVTETVLTSAFKANGWQGSKVLTYEN 180 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +E++ AA + RC+A + D SAL A + +PS+++ILP+ + KSP A + D++W Sbjct: 181 LEKLFAALNSGRCNAMSTDKSALAAWAGNSPKPSDYLILPETLDKSPFAGFVAANDSKWR 240 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298 N + W Y + AEE ITQ N+ + K + +P VQ+FLG+ G+ GL D+ + Sbjct: 241 NALRWITYGLFQAEESDITQANLEEKLK-SDDPFVQKFLGV--GGGYGKDFGLPDDFVAQ 297 Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPR--GYNALWSKGGLMYAP 339 I+ MGNYGE++ RNLG + + + R NALW++GG +Y+P Sbjct: 298 AIKAMGNYGEIYARNLGPDTSMFLDRKGTPNALWTEGGAIYSP 340 >gi|319782291|ref|YP_004141767.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168179|gb|ADV11717.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 344 Score = 341 bits (876), Expect = 8e-92, Method: Composition-based stats. Identities = 119/339 (35%), Positives = 196/339 (57%), Gaps = 3/339 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKC-GINTGLVGFAEVKANGDWKGF 59 M L L+ + + L +K RG L C G + +GFAEV G+WKG Sbjct: 4 MKWGAAAMALGLVHFAAPAEAAGGKTLEAVKARGVLNCTGHDGSYLGFAEVDDKGNWKGM 63 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D CRA+++A+ DP+K++ +P++ +R+ +LQS +DI+ + + TL R+ LGL F Sbjct: 64 DIDLCRAVATAVLGDPAKLKVVPISWAQRWPSLQSGDVDIIIKASGGTLSRDTELGLQFS 123 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + HK+ + S+ +G +IC+ AGT+ E +A Y +K P++ E+ Sbjct: 124 MSYYLGTTKVMAHKELNLKSLKDAAGGTICIPAGTSQEQQVAAYTAKLGIKLEPVLIEKT 183 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 EE++ AY + RCD Y L ++ + +HVILPD+++ P + QGD W + Sbjct: 184 EELEQAYFSGRCDLYAQWGPTLAIARIAKSKVDDHVILPDVLAVEPEVMIMRQGDDNWVD 243 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 I +WT ++ AE+ GIT KN+++V T+P V +FLG+ + +G+ LGL DW Y++ Sbjct: 244 IANWTLSTLIFAEQEGITSKNVDEVKAKPTSPQVAKFLGV--TPGMGKGLGLDDDWAYKV 301 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYA 338 I+++GNYGE+F+R+LG S K+ R LW+ GG+++ Sbjct: 302 IKNVGNYGEIFERDLGKDSPYKMDRELTNLWNNGGVLFP 340 >gi|261314499|ref|ZP_05953696.1| cationic amino acid ABC transporter [Brucella pinnipedialis M163/99/10] gi|261303525|gb|EEY07022.1| cationic amino acid ABC transporter [Brucella pinnipedialis M163/99/10] Length = 247 Score = 337 bits (864), Expect = 2e-90, Method: Composition-based stats. Identities = 139/247 (56%), Positives = 184/247 (74%), Gaps = 3/247 (1%) Query: 98 DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTT 155 D+L RNT WT+ R+ SLGL F I Y+DGQGF+++ KK GI+S QLSGASICVQAGTT Sbjct: 2 DVLIRNTTWTISRDTSLGLDFAGINYYDGQGFMINSKKLAGINSALQLSGASICVQAGTT 61 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215 TEL +ADYF+A+ M+Y+P+VFE++EE +AAY + RCDAYT D S+LY ++L P +HV Sbjct: 62 TELNMADYFRANKMEYNPVVFEKIEEANAAYDSGRCDAYTTDQSSLYGVRLALANPDDHV 121 Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 ILP+IISK P + QGD W ++V WTH A++ AEE GITQ N+ ++ K + NPD++R Sbjct: 122 ILPEIISKEPFGLTVRQGDARWADVVRWTHNALLNAEEYGITQANVEEMKK-SDNPDIKR 180 Query: 276 FLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGL 335 LG + + IG LGL KDW +II+ +GNYGE+F+RN+G+ S LKI RG NA W+KGGL Sbjct: 181 LLGAEADTKIGTDLGLDKDWVVKIIKGVGNYGEIFERNIGSGSPLKIARGLNAQWNKGGL 240 Query: 336 MYAPPIR 342 Y P+R Sbjct: 241 QYGIPVR 247 >gi|170690235|ref|ZP_02881402.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] gi|170144670|gb|EDT12831.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] Length = 345 Score = 336 bits (862), Expect = 3e-90, Method: Composition-based stats. Identities = 138/334 (41%), Positives = 192/334 (57%), Gaps = 6/334 (1%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 L L + S + + L +K RG L+CG++ G+ GF+ A G W G DVDFCRAL++ Sbjct: 17 LSLASVPSISNAADGEALASVKTRGVLRCGVSEGVAGFSSQDAAGQWSGIDVDFCRALAA 76 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 A D K+ ++PL A ERF AL++++ID+LSRNT WTLLRE +L F + ++D Q F Sbjct: 77 AALGDSRKVAFVPLKASERFPALETRRIDVLSRNTTWTLLREGALKAQFAGVLFYDNQAF 136 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 ++ L GA++CVQ T+T L Y A P+V +E A+ A Sbjct: 137 MVPAASASQLAGALKGATVCVQKDTSTLSHLIAYSDASGADIKPLVAGSADEARRAFFAG 196 Query: 190 RCDAYTGDISALYALKLTNDRPSE-HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 RC AYT D S L AL L S+ ILP+ ISK PL P + GD W +V W + Sbjct: 197 RCAAYTADASYLAALLLHAPGGSQAFAILPERISKEPLGPVVRGGDQAWLTLVRWVLLTL 256 Query: 249 VTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGE 308 + AEE+ +T++N+ + NP V R L D + + +G+ WT R + +GNYG+ Sbjct: 257 IAAEEMDVTRENLEIRLR---NPSVSRALVPDDT--VTRTIGVEPGWTVRALESVGNYGQ 311 Query: 309 MFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 MFDRN+G S L + RG N LW++GGLMYAPPIR Sbjct: 312 MFDRNVGAHSPLGLARGTNDLWTRGGLMYAPPIR 345 >gi|83591779|ref|YP_425531.1| extracellular solute-binding protein [Rhodospirillum rubrum ATCC 11170] gi|83574693|gb|ABC21244.1| extracellular solute-binding protein, family 3 [Rhodospirillum rubrum ATCC 11170] Length = 364 Score = 335 bits (859), Expect = 7e-90, Method: Composition-based stats. Identities = 124/324 (38%), Positives = 187/324 (57%), Gaps = 4/324 (1%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 + L +++RG+L CG+N L G V +G W+GFD+D+CRA+++A D +++ Sbjct: 42 SAAEGDTLRQVRERGYLTCGVNARLTGLGSVDPDGVWRGFDIDYCRAVAAAALGDSGRVR 101 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 ++PL+ + R LAL S ++D+LSRNT WTL R+ G++F ++ FDG G + K Sbjct: 102 FVPLDIRSRLLALTSGEVDLLSRNTTWTLERDAGQGISFVGVSLFDGPGLLAWKDLPGDD 161 Query: 140 VSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 ++ L A +CVQ+ T L A + + + F +EE A CD Y D Sbjct: 162 LASLPPTARLCVQSAATAARVLPARMAAAGLSFTILPFRSLEEARMALFTRACDGYVADR 221 Query: 199 SALYALK-LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 +AL +L RP +LPD+++ PL PA+ GD W++I WT +A++ AEE G++ Sbjct: 222 TALASLATFEAPRPDALRLLPDLLAVEPLGPAVRDGDANWFDIARWTLFALIKAEEEGLS 281 Query: 258 QKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQ 317 + V + T +P+++RFLG+D +G LGL W RI+ +G YGE+FDRNLG Sbjct: 282 HDRLPAVLESTQDPELRRFLGLDP--GVGAPLGLDDAWVRRIVSQVGTYGEVFDRNLGQG 339 Query: 318 SELKIPRGYNALWSKGGLMYAPPI 341 S LK+ RG NAL GGLM APP Sbjct: 340 SPLKLERGPNALRRDGGLMVAPPF 363 >gi|148555539|ref|YP_001263121.1| extracellular solute-binding protein [Sphingomonas wittichii RW1] gi|148500729|gb|ABQ68983.1| extracellular solute-binding protein, family 3 [Sphingomonas wittichii RW1] Length = 347 Score = 333 bits (855), Expect = 2e-89, Method: Composition-based stats. Identities = 125/312 (40%), Positives = 201/312 (64%), Gaps = 5/312 (1%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L ++ RG+++CG + GF+ +G W+G DVD CRA++ A D K++++PL Sbjct: 34 TLEAVRSRGYVRCGASKEAPGFSGPDESGRWRGLDVDTCRAIAVAALGDREKVRFVPLTG 93 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 ++R ALQ+ +ID+L R T WTL R+ + G+ F TY+D F++ +K G+ ++ L G Sbjct: 94 QQRITALQTGEIDVLPRTTTWTLRRDAA-GINFTIPTYYDYTAFMVRRKVGVRDLAGLRG 152 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 AS CVQ+G+ TE+ LAD + + + P++F+ V+ A+ + RCDA D SAL AL+ Sbjct: 153 ASACVQSGSMTEVILADVSRKYRLALRPVIFDNVQSTRQAFLSGRCDALITDASALAALR 212 Query: 206 LTND-RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 T R ++VILP + +PL PA+ GD +W++IV ++ AM+ E+LGI + +++ Sbjct: 213 ATLPGRADDYVILPADSNVAPLTPAVRHGDDQWFDIVKFSIEAMIDGEQLGIGRDTADRL 272 Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324 + +P+V+RFLG++ + G ALG++ D+ Y+I+R +GNYGE++D NLG++S L IPR Sbjct: 273 RA-SADPNVRRFLGVEPGN--GRALGISDDFAYQIVRQIGNYGEVYDDNLGSRSRLNIPR 329 Query: 325 GYNALWSKGGLM 336 G N L GGLM Sbjct: 330 GLNRLQRDGGLM 341 >gi|148240911|ref|YP_001220412.1| general L-amino acid-binding periplasmic protein [Bradyrhizobium sp. BTAi1] gi|146411287|gb|ABQ39740.1| General L-amino acid-binding periplasmic protein [Bradyrhizobium sp. BTAi1] Length = 339 Score = 327 bits (839), Expect = 2e-87, Method: Composition-based stats. Identities = 112/323 (34%), Positives = 184/323 (56%), Gaps = 7/323 (2%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 + S++ IK+RG++ CG + G+ G + NG ++GFD D CR ++AI D KI+ Sbjct: 20 SAGAQSVVNKIKQRGYVSCGASQGVPGLSRPDENGYYRGFDSDMCRTFAAAILGDKDKIR 79 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 ++PLNA +RF ALQ+ +ID+LSR + TL R+ + + IT +D G ++ K I+ Sbjct: 80 FVPLNAGQRFPALQTGEIDVLSRTSTITLSRDTVVRFVW--ITLYDTDGLLVRKADKITD 137 Query: 140 VSQLSGASICVQ-AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 QL+G ++C+Q G+ TE ++ + + + + + F+ + A+ RCD Y D Sbjct: 138 PKQLAGKTVCLQGGGSLTERSIEETEEEYGITMKKVYFDSTIQARDAFFGGRCDTYVTDG 197 Query: 199 SALYALKLT-NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 +A + + P ++ I+ + P A+ +GD + ++I WT A++ AE GIT Sbjct: 198 TAAAGQRASVAKNPDDYDIIKVGHAAEPNGVAVARGDDQLFDITRWTINALLWAELHGIT 257 Query: 258 QKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQ 317 +NI++ K + + +++R LG + G+ LGL W Y +++ MGNY E++D NLG Sbjct: 258 ARNIDEKLK-SGSIEIKRVLGQEP--GFGKPLGLDDKWVYNVVKQMGNYAEIWDNNLGKS 314 Query: 318 SELKIPRGYNALWSKGGLMYAPP 340 S LKI RG NALW GGL Y P Sbjct: 315 SPLKIDRGLNALWKDGGLNYPYP 337 >gi|218672485|ref|ZP_03522154.1| general L-amino acid ABC transporter, substrate-binding protein [Rhizobium etli GR56] Length = 219 Score = 326 bits (837), Expect = 2e-87, Method: Composition-based stats. Identities = 129/220 (58%), Positives = 176/220 (80%), Gaps = 1/220 (0%) Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y+DGQGF++ K + S +LSGAS+CVQ+GTTTEL LADYFKA+N++Y+P+VFE+++E+ Sbjct: 1 YYDGQGFMVRKSLNVKSALELSGASVCVQSGTTTELNLADYFKANNLQYNPVVFEKLDEV 60 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 +AAY A RCD YT D S LY+L+LT P EH ILP+IISK PL PA+ QGD +W++IVS Sbjct: 61 NAAYDAGRCDVYTTDQSGLYSLRLTLKNPDEHAILPEIISKEPLGPAVRQGDDQWFDIVS 120 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302 W YA++ AEE GITQ N++ + K++ NPD++RFLG++ + IG LGLT +W Y II++ Sbjct: 121 WVGYALINAEEFGITQANVDDM-KNSPNPDIKRFLGVEADTKIGTDLGLTNEWAYNIIKN 179 Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGE+F+RN+G S+LKI RG NALW+KGG+ YAPP+R Sbjct: 180 VGNYGEVFERNVGQGSQLKIARGLNALWNKGGIQYAPPVR 219 >gi|87119292|ref|ZP_01075190.1| ABC glutamate/glutamine/aspartate/asparagine transporter, periplasmic substrate-binding protein [Marinomonas sp. MED121] gi|86165683|gb|EAQ66950.1| ABC glutamate/glutamine/aspartate/asparagine transporter, periplasmic substrate-binding protein [Marinomonas sp. MED121] Length = 344 Score = 326 bits (837), Expect = 2e-87, Method: Composition-based stats. Identities = 113/340 (33%), Positives = 178/340 (52%), Gaps = 13/340 (3%) Query: 10 LCLIILFFTSFSTNA------SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 L L IL F++ S A S L + +RG L CG+ + + G W+GF VDF Sbjct: 11 LTLFILSFSTLSQAAQIIKPNSTLTQVIQRGDLNCGVFPDDPSRSAINLEGQWQGFYVDF 70 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 CRA ++A+ D + Y+ + A RF L + D++ ++ WT RE L F + Sbjct: 71 CRATAAAVLKDQEFVNYIEVGATTRFSTLVELKTDVVMYSSTWTHSREFQYQLDFPAVYL 130 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 FDGQGFI+ I +++ L ++CV T+T L D ++ +K + + Sbjct: 131 FDGQGFIVRAATNIQTINDLDNKTVCVTQNTSTHQNLVDLIESRELKTKILF--SNGDSF 188 Query: 184 AAYRAHRCDAYTGDISALYALKLT-NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 +R CDAYT D L + D+P + +LPD IS+ P+ P + D +W I+ Sbjct: 189 --FRGGPCDAYTADRMNLATNRANRTDKPENYRLLPDTISREPIGPMVRNDDAQWSRIIR 246 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302 +A++ AEE I N++Q + N +VQ LG K IG+ LGL W YR I+ Sbjct: 247 AVVHALILAEEKNINAANVDQALTQSKNAEVQNLLG--KKGEIGQQLGLDNQWAYRAIKA 304 Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGE+++R+ G+ S++ + RG N W++GG++YAP + Sbjct: 305 VGNYGEVYNRHFGSHSKIGVKRGINQPWNQGGILYAPIFK 344 >gi|110347225|ref|YP_666043.1| extracellular solute-binding protein [Mesorhizobium sp. BNC1] gi|110283336|gb|ABG61396.1| amino acid ABC transporter substrate-binding protein, PAAT family [Chelativorans sp. BNC1] Length = 340 Score = 326 bits (836), Expect = 3e-87, Method: Composition-based stats. Identities = 116/344 (33%), Positives = 183/344 (53%), Gaps = 6/344 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + ++L SI +++RG++ CG + G+ G + G W GFD Sbjct: 1 MKRVTQFAAAAAMVLIGAGSVNAQSITDKVRQRGYVSCGASQGVPGLSRPDDKGVWTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD CRA+++A F D K Q++PLNA +R A+Q+ ++D+L+R T WT R++++ Sbjct: 61 VDSCRAVAAAFFGDSQKAQFVPLNAAQRIPAVQTGEVDVLARTTTWTYTRDVAVRF--VA 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFERV 179 I DG ++ K + + + L G +IC+Q G + D + N K + F+ Sbjct: 119 INLVDGDAIMLRKSLNVGAAADLEGLTICLQGGGSLVENALDLIEQQNQVKVERVYFDST 178 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLT-NDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 AY RCD Y D A+ + P EH I + PLA AI +GD W+ Sbjct: 179 ILARDAYFGGRCDGYMSDGFAIAGQRAAVASNPDEHAIFQSGATTEPLALAIPRGDDRWF 238 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298 +IV + AMV AE+ GIT KN+++++ T+ + ++ LG++ IGE L L W Y Sbjct: 239 DIVRYAFNAMVWAEDRGITSKNVDEIAASATDGETRKALGVEP--GIGEPLKLDDKWIYN 296 Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +I+ +GNYGE+F RNLG +S LK R NAL GG+++ P + Sbjct: 297 VIKQVGNYGEVFARNLGEESPLKAERRLNALPRDGGILFPIPFK 340 >gi|117923521|ref|YP_864138.1| extracellular solute-binding protein [Magnetococcus sp. MC-1] gi|117607277|gb|ABK42732.1| amino acid ABC transporter substrate-binding protein, PAAT family [Magnetococcus sp. MC-1] Length = 342 Score = 321 bits (824), Expect = 7e-86, Method: Composition-based stats. Identities = 114/328 (34%), Positives = 185/328 (56%), Gaps = 4/328 (1%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 + + L ++ RG L CG+ TG F++ + +G W GF D+CRAL+ A+ DD Sbjct: 18 APAQAAPASDTLDKVRARGLLNCGVMTGTPAFSQQQPDGAWHGFFADWCRALAVAVLDDA 77 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 + ++ + RF AL Q+D++ NT WTL RE + F I +DGQ K Sbjct: 78 RAVHFIQVTPATRFKALTELQVDVVMSNTTWTLSREYQYQVRFPAIYLYDGQAIATRKDT 137 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 +++Q + A++CV+ +T+ L +Y + +N+ ++ + + + I A+ HRCD T Sbjct: 138 RWHTLAQANQATVCVEPNSTSHANLQEYAQRNNLNFNYLALNQ-QGIITAFLEHRCDLIT 196 Query: 196 GDISALYA-LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D AL A LK T ++V+ + +S+ PLAP + D W IV A++ A+E Sbjct: 197 DDRIALTANLKTTASNDQDYVVFAETLSREPLAPMVRADDERWQRIVRMVVQALLVADEK 256 Query: 255 GITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNL 314 G+++ + Q + ++P+VQR LG + + G+ +GL++ W R+I +GNYGE+F R+L Sbjct: 257 GVSRDALKQNRERLSDPEVQRLLGSE--DDPGQFVGLSRGWARRMIEAVGNYGELFARHL 314 Query: 315 GNQSELKIPRGYNALWSKGGLMYAPPIR 342 G QS L++PR N WS+GGL YAPP R Sbjct: 315 GAQSSLQMPRLLNRPWSRGGLFYAPPFR 342 >gi|209546999|ref|YP_002278917.1| family 3 extracellular solute-binding protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538243|gb|ACI58177.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 345 Score = 316 bits (810), Expect = 3e-84, Method: Composition-based stats. Identities = 112/318 (35%), Positives = 187/318 (58%), Gaps = 7/318 (2%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 S+L +K+RG L CG + GF + +G DVD CRA ++A+ DP K+ ++ + Sbjct: 27 SVLDSVKQRGVLNCGTDNTTPGFGYLNPKTSKMEGVDVDLCRATAAAVLGDPDKVNFVVV 86 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 K RF A+Q+ Q+DI+ +T R +L + F P +FDG G ++ G+ S++ L Sbjct: 87 TDKSRFNAVQTGQVDIVYAHTSVFASRAAALAVDFLPSYFFDGGGVMVTAASGVKSINDL 146 Query: 144 SGASICVQAGTTTELTLADYFKAHN-MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 SGA+IC G+ +E TLA KA N + F+ E++ +A + RC+ D SAL Sbjct: 147 SGATICTTQGSGSEATLAQEVKARNLTNTKILTFDTSEKLFSALTSGRCNGMYTDKSALA 206 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 A + + + +++VILP+ ++ +P A I+Q D EW +++WT YA+ AEE GIT N++ Sbjct: 207 AWRGNSQKSADYVILPETLAVAPFAGIIVQNDPEWRKLMTWTLYALFQAEEWGITSANLS 266 Query: 263 QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKI 322 ++ K + +P +Q+FLG++ G ++ + +I+ +GNYGE++DR+LG ++ L + Sbjct: 267 EMQK-SADPAIQKFLGVNG--GFGADFHVSDSFIADMIKGVGNYGEIYDRSLGPKTPLYL 323 Query: 323 PRGY--NALWSKGGLMYA 338 R NAL GGL+Y+ Sbjct: 324 ERDKTSNALSKNGGLLYS 341 >gi|83593850|ref|YP_427602.1| extracellular solute-binding protein [Rhodospirillum rubrum ATCC 11170] gi|83576764|gb|ABC23315.1| extracellular solute-binding protein, family 3 [Rhodospirillum rubrum ATCC 11170] Length = 373 Score = 308 bits (790), Expect = 7e-82, Method: Composition-based stats. Identities = 110/321 (34%), Positives = 167/321 (52%), Gaps = 3/321 (0%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 N L I+ RG + CG N + GF ++G+W+GF +DFCRAL++A DP+ + +P Sbjct: 55 NGDTLTSIRDRGSVTCGTN-PIPGFGFPDSDGNWRGFFIDFCRALAAATLGDPTAFEVVP 113 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + + R+ AL S D+ + WTL R+ +LG F + +DGQ F+ SV Sbjct: 114 VESNSRWEALNSHTTDVNVDGSTWTLSRDTALGFDFPGVLIYDGQRFLAKPSVPEGSVKA 173 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 +G +C+ GTT E+ L D+ K ++++ I E E ++ RC+ + D L Sbjct: 174 AAGLRVCIIMGTTAEVNLRDFLKKNDLEMTVIATESDEGAWTSFLKGRCELFVNDGIGLA 233 Query: 203 AL-KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 L P + ++ + ISK PL P + D +W I W ++ AEE GI+ + Sbjct: 234 LRNALHMTPPRVNHLMTEAISKEPLGPVVRGDDHQWLEINRWVLNVLIAAEEAGISSTTL 293 Query: 262 NQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELK 321 S R + + ALGL W R+I +GNYGE+FDRNLG SE+ Sbjct: 294 VDPSPTADLSSEDRVF-VGGPEDNAAALGLEPGWARRVIAAVGNYGEVFDRNLGKGSEIG 352 Query: 322 IPRGYNALWSKGGLMYAPPIR 342 + RG NALWS+GGLM +PP++ Sbjct: 353 LDRGVNALWSEGGLMISPPLQ 373 >gi|56697219|ref|YP_167584.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Ruegeria pomeroyi DSS-3] gi|56678956|gb|AAV95622.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Ruegeria pomeroyi DSS-3] Length = 333 Score = 308 bits (790), Expect = 8e-82, Method: Composition-based stats. Identities = 103/342 (30%), Positives = 176/342 (51%), Gaps = 14/342 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M +++ + ++ + I+ RG+L CG+ + +GFA ++ +G+W GFD Sbjct: 2 MRFRGALTLGLWLAGALSAQAGEGDTGAAIRDRGYLLCGVGSDDLGFATLRFDGEWTGFD 61 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDFCRA+++A+ D + ++++PL++ R L ++D+L R T +T R+++ L F Sbjct: 62 VDFCRAVAAAMLGDATAVEFVPLDSLNRLEVLARGEVDVLFRTTTFTFDRDVNAALEFPA 121 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 ITY+D Q +++ G ++S L+G ++C +GTT+ + + + Sbjct: 122 ITYYDSQKVLVYADTGARTLSDLAGKTVCANSGTTSITNIRHRIDSLGGGIGIQEYASQA 181 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRP-SEHVILPDIISKSPLAPAIIQGDTEWYN 239 A+ C+A T D S L A+ + + V+L D I+ PL P + + D +W Sbjct: 182 GRWRAFFGRECEAVTADGSDLAAMMASRPGYRDDFVLLEDEIANEPLGPVVREDDRQWEQ 241 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV W + AE GI Q + ++ R + G LG+ W + Sbjct: 242 IVRWVINLTLVAETAGIGQ--------VSDPEEIARL-----ALPAGADLGVVDTWGAEV 288 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341 IR +GNY ++F RNLG+ SEL++ RG NALW+ GGLMY P+ Sbjct: 289 IRQVGNYDDIFRRNLGDGSELRMERGRNALWTDGGLMYPLPM 330 >gi|254464335|ref|ZP_05077746.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Rhodobacterales bacterium Y4I] gi|206685243|gb|EDZ45725.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Rhodobacterales bacterium Y4I] Length = 333 Score = 307 bits (788), Expect = 1e-81, Method: Composition-based stats. Identities = 106/345 (30%), Positives = 177/345 (51%), Gaps = 19/345 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M + F+S L L + + A I+ RG+L CG+ + +GFA ++ +G+W Sbjct: 1 MMR--FLSALTLGLWLAGALGAEAGEGDTGAAIRDRGYLLCGVGSDDLGFATLRYDGEWT 58 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVDFCRA+++A+ D + ++++PL++ R L ++D+L R T +T R+++ L Sbjct: 59 GFDVDFCRAVAAAMLGDATAVEFVPLDSLNRLEVLARGEVDVLFRTTTFTFDRDVNAALE 118 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F IT++D Q +++ G +++ L+G ++C +GTT+ + + + Sbjct: 119 FPAITFYDSQKVLVYADTGARTLADLAGKTVCANSGTTSITNIRHRIDSLGGGIGIQEYA 178 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP-SEHVILPDIISKSPLAPAIIQGDTE 236 A+ C+A T D S L A+ + + V+L D I+ PL P + + D + Sbjct: 179 SQAGRWRAFFGRECEAVTADGSDLAAMLASRPGYRDDFVLLEDEIANEPLGPVVREDDRQ 238 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWT 296 W IV W + AE GI Q + ++ R G LG+ W Sbjct: 239 WEQIVRWVINLTLVAEAAGIGQ--------TSGPAEIARL-----PLPAGADLGVAGTWG 285 Query: 297 YRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341 +IR +GNY ++F RNLG+ SEL++ RG NALW+ GGLMY P+ Sbjct: 286 ADVIRQVGNYDDIFSRNLGDGSELRMARGRNALWTDGGLMYPLPM 330 >gi|330899538|gb|EGH30957.1| extracellular solute-binding protein [Pseudomonas syringae pv. japonica str. M301072PT] Length = 218 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 109/220 (49%), Positives = 154/220 (70%), Gaps = 2/220 (0%) Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y+DG GF+++ K G++S +L GA+IC+QAGTTTEL ++DYF+++ +KY PI F+ +E Sbjct: 1 YYDGIGFLVNNKLGVNSAKELDGATICIQAGTTTELNVSDYFRSNGLKYTPITFDTSDES 60 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + RCD T D S LYA + +P ++++LP++ISK PL P + +GD EW++IV Sbjct: 61 AKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYIVLPEVISKEPLGPVVRKGDEEWFSIVR 120 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302 WT +AM+ AEE IT KN+ +K T NPDV R LG D + G+ L L KDW +I++ Sbjct: 121 WTLFAMLNAEEAKITSKNVEAEAKSTKNPDVARMLGADGT--YGQDLKLPKDWVVQIVKQ 178 Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGE+F+RNLG + LKI RG NALW+ GG+ YAPPIR Sbjct: 179 VGNYGEVFERNLGEGTPLKIKRGQNALWNAGGIQYAPPIR 218 >gi|117925598|ref|YP_866215.1| extracellular solute-binding protein [Magnetococcus sp. MC-1] gi|117609354|gb|ABK44809.1| amino acid ABC transporter substrate-binding protein, PAAT family [Magnetococcus sp. MC-1] Length = 360 Score = 301 bits (771), Expect = 1e-79, Method: Composition-based stats. Identities = 110/324 (33%), Positives = 179/324 (55%), Gaps = 3/324 (0%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 ++ S + IK RG L+CG+ + + + +G+W+GF VD C AL A+ ++ Sbjct: 39 AASLGSTVQGIKDRGVLRCGVEQNTLTMSAMDRDGEWRGFMVDLCHALGVALLGTTQDVE 98 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 + +N R+ AL+ D+L N+ WTL RE +LG+ F FDGQGF+ H K+G + Sbjct: 99 IIEVNKHLRYEALKGNAYDVLMSNSTWTLTRETALGVRFVTPYLFDGQGFLAHLKQGRTR 158 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 +S A+ICV TT+ L H + F +E + ++ + CD + D Sbjct: 159 LSAYDKANICVLDSTTSLTNLKALLAQHYPHFTLTSFVTLERMRESFFSGNCDMLSSDRL 218 Query: 200 ALYALKL-TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 L + +L + IL DIIS+ PL P + QGD +W++++ W ++ AE G+T+ Sbjct: 219 VLASEQLVRGGEQGAYHILEDIISREPLGPYVRQGDEQWFSLLRWLVQGLLLAEHKGVTR 278 Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318 N+++++ T + ++Q LG+ N +ALG+ W R+IR +GN+ E++ RNLG + Sbjct: 279 DNVDKLAGTTEDREIQHLLGVVG--NAHQALGVDAQWMRRVIRVVGNFEEIYQRNLGALA 336 Query: 319 ELKIPRGYNALWSKGGLMYAPPIR 342 +L + RGYN LW KGGL Y PP + Sbjct: 337 QLGVRRGYNGLWYKGGLHYVPPFQ 360 >gi|254230451|ref|ZP_04923829.1| hypothetical protein VEx25_B0035 [Vibrio sp. Ex25] gi|151937022|gb|EDN55902.1| hypothetical protein VEx25_B0035 [Vibrio sp. Ex25] Length = 222 Score = 301 bits (771), Expect = 1e-79, Method: Composition-based stats. Identities = 114/225 (50%), Positives = 153/225 (68%), Gaps = 3/225 (1%) Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F + Y+DGQGF++ K GISS +L GAS+CVQ+GTTTEL LADYF+ M Y P+VF+ Sbjct: 1 FVGVNYYDGQGFMVKKDLGISSAKELDGASVCVQSGTTTELNLADYFRNSGMSYKPVVFD 60 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + + A RCD T D S LYAL+L PS +LP+IISK PL P + QGD +W Sbjct: 61 TAAQTSKGFDAGRCDVLTTDQSGLYALRLNLKDPSSAAVLPEIISKEPLGPVVRQGDDQW 120 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297 +NI WT AM+ AEE GI+ KN +++ K + +P+++R LG+D G+ LG+ DW Y Sbjct: 121 FNIAKWTLSAMINAEEYGISSKNADEMLK-SKDPNIKRILGVDGPK--GKGLGIRDDWGY 177 Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++I+ +GNYGE F+R +G S L+I RG NALW+ GG MYAPPIR Sbjct: 178 QVIKQVGNYGESFERTVGTGSPLEISRGVNALWNAGGFMYAPPIR 222 >gi|144897558|emb|CAM74422.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Magnetospirillum gryphiswaldense MSR-1] Length = 335 Score = 299 bits (767), Expect = 3e-79, Method: Composition-based stats. Identities = 118/341 (34%), Positives = 180/341 (52%), Gaps = 14/341 (4%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 F ++L + + + +L + RG + CG++ GF G G +VD Sbjct: 7 SFMTAMLFALSAPAPTPALAGQVLDRVLTRGKVVCGVDQT-PGFGGFDDRGVPVGLEVDL 65 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 CRA+++AI +P IQ + K +F AL ++D+ T WT R+ ++ +F I + Sbjct: 66 CRAIAAAILKNPQAIQVQRVTTKYKFHALAEGELDVAFGMTTWTFDRDTTMMASFPAIAF 125 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 +DGQGF+ I+ + ++ICVQ+GTT+ LA+Y + EE Sbjct: 126 YDGQGFMKWAD--IADP-WAATSTICVQSGTTSANNLAEYLSRRKSAAKVLALSSSEEKF 182 Query: 184 AAYRAHRCDAYTGDISALYAL--KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +A+ RC A TGD + L + + +PS V+L IIS+ PL PAI D EW++IV Sbjct: 183 SAFAERRCTAVTGDSTELAVQKNRRSATQPS-WVLLETIISREPLGPAIFNNDPEWFSIV 241 Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301 W+ + AE G+ + N+ V T+ +++R LG + G L L + W RII Sbjct: 242 RWSMLIPIIAEARGLGRYNLESVPA--TDAELRRLLGEEP--GFGANLRLDQAWARRIIA 297 Query: 302 HMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGE+F RNL + L I RG NALWS+GGL+YAPP+R Sbjct: 298 SVGNYGEIFARNL---APLGIVRGQNALWSEGGLLYAPPLR 335 >gi|256376161|ref|YP_003099821.1| extracellular solute-binding protein family 3 [Actinosynnema mirum DSM 43827] gi|255920464|gb|ACU35975.1| extracellular solute-binding protein family 3 [Actinosynnema mirum DSM 43827] Length = 319 Score = 296 bits (758), Expect = 4e-78, Method: Composition-based stats. Identities = 100/325 (30%), Positives = 171/325 (52%), Gaps = 7/325 (2%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 T+ ++ + + I++RG L+ G++TG+ G + G +G DVD RA+++A+F +P Sbjct: 1 MTTSASLSPTVSAIRRRGHLRLGVSTGIRGLSWTDDAGVRRGLDVDTGRAVAAALFGEPG 60 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 +I+Y ++ ++R A+ S +D+L+ N WT RE +AF T +D ++ + G Sbjct: 61 RIEYTEIDPEDRIRAVTSDAVDLLACNATWTFSRECDANVAFVLTTCYDEGAILVRRDSG 120 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 I+S L G ++ + GT++E L +F H + AAY + Y Sbjct: 121 IASADDLDGHTLGMCEGTSSEEALRAWFGPRGRAVHCKHYASPAAALAAYASGEVTGYVA 180 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 D + + PS+HV+LP+ +S P+ P + D +W W +A++ AE G+ Sbjct: 181 DGVVVAGERTRLATPSDHVVLPERVSVEPMGPVVKDDDPQWVKTARWVFFALIAAEAAGV 240 Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316 T + + +P + + S + GL W ++ +GNYGE+++RNLG+ Sbjct: 241 TSHQVR--AGTAEDPPL-----LKDQSRLAAKAGLHPRWISAVVGEVGNYGEIYERNLGD 293 Query: 317 QSELKIPRGYNALWSKGGLMYAPPI 341 S L+IPRGYN LW +GGLMYAPP+ Sbjct: 294 ASGLRIPRGYNELWLRGGLMYAPPL 318 >gi|224367657|ref|YP_002601820.1| AapJ2 [Desulfobacterium autotrophicum HRM2] gi|223690373|gb|ACN13656.1| AapJ2 [Desulfobacterium autotrophicum HRM2] Length = 219 Score = 296 bits (757), Expect = 5e-78, Method: Composition-based stats. Identities = 109/221 (49%), Positives = 153/221 (69%), Gaps = 3/221 (1%) Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y+DGQGF++ KK G+ +L GA++CV GTTTE +ADYF+A+ MK +P+V E E Sbjct: 2 NYYDGQGFLISKKLGVKDAKELDGATVCVLPGTTTEQNVADYFRANGMKMNPVVIENTAE 61 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + A+ A RCD T D S L + P +++ILP IISK PLAPA+ GD +W ++V Sbjct: 62 LAKAFFAGRCDCLTSDASQLAGTRAVAPNPDDYIILPTIISKEPLAPAVRHGDNKWKDVV 121 Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301 +++ AM+ AEELGIT KN+++ K +T+P VQRFLG+ S G+ALGL + + Y I++ Sbjct: 122 NYSVLAMINAEELGITSKNVDEKLK-STDPKVQRFLGV--SPGNGKALGLDEKFAYNIVK 178 Query: 302 HMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGEMF+RN+G + LKI RG NALW+ GGLMY+ P + Sbjct: 179 QVGNYGEMFERNVGMDTPLKIERGLNALWTNGGLMYSAPFK 219 >gi|113478121|ref|YP_724182.1| Na-Ca exchanger/integrin-beta4 [Trichodesmium erythraeum IMS101] gi|110169169|gb|ABG53709.1| Na-Ca exchanger/integrin-beta4 [Trichodesmium erythraeum IMS101] Length = 3427 Score = 296 bits (757), Expect = 5e-78, Method: Composition-based stats. Identities = 116/325 (35%), Positives = 174/325 (53%), Gaps = 13/325 (4%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 +L IK+RG LK G+ GFA +NG+++GFDVD +A+++AIF DP K++ + Sbjct: 2867 DLLAKIKERGVLKLGLPDNEPGFAVKMSNGEYEGFDVDLGKAIAAAIFGDPEKLEVKTQS 2926 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 K+ F + +DI + L+R+ SLG+ F PI + GQG ++ GI+ + L+ Sbjct: 2927 FKDSFANTANGVVDISAMGITHNLVRDASLGIDFGPIYLYTGQGVLVRNDSGITVLPALN 2986 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G + V G T+ + D P F +E+ AAY DA D++ L Sbjct: 2987 GRRVGVLEGATSLQNIQDTITELGGDIIPAEFTTNDEMFAAYDDGDIDAVITDMTILNGR 3046 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 P EH IL DI+SK PL I + +EW ++V W A+V AEE IT KNI ++ Sbjct: 3047 VQNLSNPKEHKILDDILSKEPLGLIIDENQSEWSDVVRWVTNALVQAEEYDITSKNIKRL 3106 Query: 265 SKDTTNPD--------VQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316 + + D V++FLGI+ NIG+ LGL D+ +I+ +GNYGE+++R Sbjct: 3107 MANNLDDDPNNDSDPVVRQFLGIEG--NIGKVLGLPNDFVPNVIKAVGNYGEIYERYF-- 3162 Query: 317 QSELKIPRGYNALWSKGGLMYAPPI 341 S L +PR N L+S GL YA P+ Sbjct: 3163 DSNL-LPREQNELFSNFGLQYALPL 3186 Score = 264 bits (676), Expect = 1e-68, Method: Composition-based stats. Identities = 105/332 (31%), Positives = 168/332 (50%), Gaps = 27/332 (8%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 + + +IL DI KRG +K I+ F D++F +++A+F D SK Sbjct: 2539 SVANPETTILDDIIKRGQIKVAISGSGNEF------------DLEFAEVIAAAVFGDASK 2586 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++ + + F + + D+ ++ TL R+ L + F P FD Q I+ I Sbjct: 2587 VKSITSKFSKSFELVADGKADLAAQRITATLGRDGELNVDFAPTYLFDYQTVIVPNDSDI 2646 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 ++VS L+ +I V GTT + L + + +K+ P +FE EE+ AAY A DAY+ D Sbjct: 2647 TNVSHLNEQTIGVIEGTTALINLQNQLEVEGIKFTPKLFETAEEMIAAYDAGEVDAYSHD 2706 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 S + +P H +L +SK P++ A+ + D++W ++V W Y + AEE GI+ Sbjct: 2707 RSLILENLDQLSQPENHRLLDVELSKEPISLALPENDSQWADVVRWAGYVPIQAEEFGIS 2766 Query: 258 QKNINQVSK--DTTNP------DVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEM 309 +NI + NP ++RFLGI+ N+GE LGL D+ II +GNY E+ Sbjct: 2767 SQNIAEFIALNTDDNPTNDSSLGIRRFLGIEG--NLGETLGLPNDFAVNIINQVGNYSEI 2824 Query: 310 FDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341 +DR+ I N+LWS GG +Y+PP Sbjct: 2825 YDRHFS-----GIEGDRNSLWSDGGFLYSPPF 2851 >gi|323165231|gb|EFZ51021.1| general L-amino acid-binding periplasmic protein aapJ [Shigella sonnei 53G] Length = 254 Score = 292 bits (747), Expect = 6e-77, Method: Composition-based stats. Identities = 117/253 (46%), Positives = 172/253 (67%), Gaps = 1/253 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K ++ +L + +A + L ++K+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +G+AF Sbjct: 61 DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +T +DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R Sbjct: 121 GVTDYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + +GD EW++ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240 Query: 240 IVSWTHYAMVTAE 252 IV WT +AM+ AE Sbjct: 241 IVRWTLFAMLNAE 253 >gi|197104926|ref|YP_002130303.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Phenylobacterium zucineum HLK1] gi|196478346|gb|ACG77874.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Phenylobacterium zucineum HLK1] Length = 310 Score = 292 bits (747), Expect = 7e-77, Method: Composition-based stats. Identities = 106/312 (33%), Positives = 179/312 (57%), Gaps = 8/312 (2%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K R ++ CG + G+ G + G W+GFDVD CRA ++A+ D KI+++PLNA +R Sbjct: 2 KGRDYVTCGASQGITGLSRPDERGVWRGFDVDVCRAFAAALLGDAQKIRFIPLNAAQRLP 61 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150 ALQ+ +ID+LSR T T R++++ +T FD I K+ G +S + L+G ++C+ Sbjct: 62 ALQTGEIDVLSRTTTMTFTRDMAVRF--VTVTQFDTDVLIFRKRLGAASPADLNGRTVCL 119 Query: 151 QA-GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT-N 208 Q+ G++ + TL +++ + F+ AY + RCD Y D + T Sbjct: 120 QSGGSSADNTLTRVEAEAKIRFERVYFDSTITARDAYFSARCDVYVTDGFLGASQVATVA 179 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 P +H +L + P AI +GD W+++V WT ++ AE+ G+TQ N++++ + + Sbjct: 180 RDPDDHALL-YLDHLLPQGVAIARGDDRWFDVVRWTVNLLIWAEQNGVTQANVDELRR-S 237 Query: 269 TNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNA 328 DV+R LG D + G A+GL DW Y++++ +GNYGE+++RNLG ++ +K R N Sbjct: 238 GPADVRRVLGADPA--FGRAIGLEPDWGYQVLKQVGNYGEIWERNLGARTRIKADRRLNR 295 Query: 329 LWSKGGLMYAPP 340 + GGL++ P Sbjct: 296 PYKDGGLLFPYP 307 >gi|288962134|ref|YP_003452429.1| ABC transporter amino-acid binding protein [Azospirillum sp. B510] gi|288914400|dbj|BAI75885.1| ABC transporter amino-acid binding protein [Azospirillum sp. B510] Length = 352 Score = 291 bits (746), Expect = 8e-77, Method: Composition-based stats. Identities = 108/337 (32%), Positives = 172/337 (51%), Gaps = 8/337 (2%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 +L L +++ + L I RGFL CG+ +G+ G + G GF VD CR + Sbjct: 21 VLPSPALTSPAWAGDGDTLERIHGRGFLICGLRSGVSGISFSDPQGHLDGFLVDVCRVFA 80 Query: 69 SAIFDDPSKIQYLPLNAK-ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 +A + I+ + L K + F A++ ++D+ T WT R++S + F DGQ Sbjct: 81 AATLGNAQAIRVVRLPEKPQEFQAVEKHEVDVALTTTTWTFSRDLSNDIEFLMPLLHDGQ 140 Query: 128 GFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 GF +H L ++CV+ TTT L D+ + ++ + F+ ++E A+ Sbjct: 141 GFAIHSDGTPPPPLDRLGPRTVCVKTATTTVRNLEDHIRKSDLPWTMRTFQTLDEALQAF 200 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHV-ILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 AH CD T D + L + + I PD+IS+ PL P I +GD WY++ W Sbjct: 201 LAHECDLLTTDRTVLVTSLAGYRKAGMGIYIYPDVISREPLTPYIARGDRNWYDVTRWIL 260 Query: 246 YAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGN 305 +A+V A+ G+T ++ Q + +P++ R LG S N LGL DW + + +GN Sbjct: 261 HAIVLADARGVTSADV-QAGRVPDDPELHRMLG--HSGNAARMLGLPDDWALQALAQVGN 317 Query: 306 YGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 YGE+F+RNLG + RG N W++GGL+Y+PP R Sbjct: 318 YGEIFERNLGI--PYGMDRGPNKPWTQGGLLYSPPFR 352 >gi|67923106|ref|ZP_00516597.1| Hemolysin-type calcium-binding region:Bacterial extracellular solute-binding protein, family 3 [Crocosphaera watsonii WH 8501] gi|67855059|gb|EAM50327.1| Hemolysin-type calcium-binding region:Bacterial extracellular solute-binding protein, family 3 [Crocosphaera watsonii WH 8501] Length = 712 Score = 290 bits (743), Expect = 2e-76, Method: Composition-based stats. Identities = 111/325 (34%), Positives = 178/325 (54%), Gaps = 14/325 (4%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 +L +IK RG LK GIN GF+ NG + GFDVD +A++ A+F+D +KI+++ Sbjct: 211 DLLQEIKDRGILKLGINGQKPGFSFPDENGSYIGFDVDLGKAIAVAVFNDSNKIEFVERE 270 Query: 85 AK-ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 + + + +D+ + L+R+ G+ F + GQGF++ K GI +++ L Sbjct: 271 DRVTWLTNVANGVVDVTAAQVTQNLVRDGKAGVDFISPYLYTGQGFLVRKDSGILNLATL 330 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 +G + + +GTT E L D K + + P+ ++ ++E+ A Y DA D+ L Sbjct: 331 NGHEVGLFSGTTAEQNLQDAMKEYGGTFIPVYYDNLDEMLAGYAQGDIDAIINDLPLLGG 390 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 L T P EH++L D+ISK PL+ + + ++W + VSW Y ++ AEE GITQ NI+Q Sbjct: 391 LIDTFSNPDEHLLLDDVISKEPLSMVVDENQSDWKDAVSWVQYGLLQAEEYGITQDNIDQ 450 Query: 264 VSKDTT--NPD------VQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLG 315 + D T NPD + FLGI+ N GE LGL D+ +I+ +GNYGE+++R+ Sbjct: 451 ILADNTDSNPDNDSDISTRIFLGIEG--NAGELLGLENDYMVNVIKAVGNYGEIYERHFD 508 Query: 316 NQSELKIPRGYNALWSKGGLMYAPP 340 + +PR +N L GL P Sbjct: 509 SD---ILPRDFNQLSGDFGLQIPYP 530 Score = 189 bits (481), Expect = 5e-46, Method: Composition-based stats. Identities = 66/199 (33%), Positives = 104/199 (52%), Gaps = 15/199 (7%) Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 G+T L ++ +++ P +E + A Y A DA + D S +Y T Sbjct: 2 IEGSTALTNLEILLSSNGVEFEPRFYESTSAMFADYDAGNIDALSTDRSLIYGRLDTLSE 61 Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK---- 266 P H IL S P+A + + D++W N+V W A + AEELG+ NI Q+ Sbjct: 62 PDAHHILDVEFSSEPIAMVLPEDDSQWNNVVKWVINATIEAEELGLNSDNIEQILAVNKD 121 Query: 267 ----DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKI 322 + ++P ++RFLGI+ +GEALGL D+ Y I++ +GNY E++DR+ + + Sbjct: 122 ENPNNDSDPAIRRFLGIESQ--LGEALGLPNDFAYNIVKLVGNYDEIYDRHFPD-----L 174 Query: 323 PRGYNALWSKGGLMYAPPI 341 R N L+S GGL+Y+PP Sbjct: 175 ERDRNLLYSDGGLLYSPPF 193 >gi|288962967|ref|YP_003453261.1| general L-amino acid transport system substrate-binding protein [Azospirillum sp. B510] gi|288915233|dbj|BAI76717.1| general L-amino acid transport system substrate-binding protein [Azospirillum sp. B510] Length = 353 Score = 282 bits (721), Expect = 6e-74, Method: Composition-based stats. Identities = 98/328 (29%), Positives = 162/328 (49%), Gaps = 6/328 (1%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 ++ +T+ +L +I++RG ++CG++ GFA G GF VD CRAL++A+ Sbjct: 30 ISARATDRPVLAEIERRGVVRCGVSFN-PGFAANDDGGRPVGFMVDLCRALAAAVLGKAD 88 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 I+ L+ + F A+ + ++D+ T WTL R+++ + F P ++D QG + Sbjct: 89 AIEIRRLSKPQEFDAVAAGEVDVSFAQTSWTLTRDVTHAVDFGPPVFYDVQGIAAWRLPD 148 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 S ++C+ AGTTT+ + + F + A+ + C A Sbjct: 149 GGSALDGGELTVCMPAGTTTQAEMESLIAGGKRPWKLRSFPGWPDALEAFLSRDCAALGA 208 Query: 197 DISAL-YALKLTNDRPSEHVILPDII-SKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D + L AL + P I + S+ PLAP D W V WT +A+ A++ Sbjct: 209 DRAQLTTALHMLGLPPDSLEITDAPLASREPLAPMTPNSDRNWMAAVRWTMFALFLADDA 268 Query: 255 GITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNL 314 G++ N N + T +++R L + GL DW Y+ + +GNYGE+FDRNL Sbjct: 269 GVSGANAN-FQRITGGSEMRRLL--SGIPEVAAKAGLRPDWAYQAVVQVGNYGEIFDRNL 325 Query: 315 GNQSELKIPRGYNALWSKGGLMYAPPIR 342 G +S K+ RG N W++GGL+YAP + Sbjct: 326 GARSPFKLERGLNRPWTQGGLLYAPVFQ 353 >gi|327395693|dbj|BAK13115.1| general L-amino acid-binding periplasmic protein AapJ precursor [Pantoea ananatis AJ13355] Length = 323 Score = 282 bits (721), Expect = 7e-74, Method: Composition-based stats. Identities = 109/321 (33%), Positives = 166/321 (51%), Gaps = 11/321 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 +++ I++ L G++ G G ++ N W GFD+D RA++ ++ D KI ++PL Sbjct: 5 AVIKRIEQHDVLNVGVSLGFKGLSQRDPLNNSWNGFDIDLARAVAISVLGDGGKIHFIPL 64 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 + +RF AL+ ID+ + N T RE G+ F FDG+ + + Q Sbjct: 65 QSADRFQALRDGVIDLGTFNASVTFQREAEYGINFLHPMLFDGEVLMTPRSNLTEETPQA 124 Query: 144 S---GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 I G+TTE L YF N+ ++F+ ++ AY + CD Y D Sbjct: 125 RFTRQRRIAAMRGSTTEENLTRYFDELNLPCEILLFDSPQQARQAYESGECDIYCLDGYL 184 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L S+H+IL D IS +APA+ D++WY W A++ AE LGITQKN Sbjct: 185 LAGEHHQLTDSSQHLILDDRISLEAMAPAVSASDSQWYIATKWVMRALIEAENLGITQKN 244 Query: 261 INQVSKDTTNPD--VQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318 I + + NP+ ++ FL D N+ LGL D+ IIR +GNYGE+F+RNLG S Sbjct: 245 I---LEKSDNPEGYLKTFLYPDV--NLCSQLGLQPDFIREIIRKIGNYGEIFERNLGKNS 299 Query: 319 ELKIPRGYNALWSKGGLMYAP 339 ELK R N W++GG++++P Sbjct: 300 ELKQQRRDNKPWAEGGMLWSP 320 >gi|291619370|ref|YP_003522112.1| AapJ [Pantoea ananatis LMG 20103] gi|291154400|gb|ADD78984.1| AapJ [Pantoea ananatis LMG 20103] Length = 323 Score = 280 bits (716), Expect = 3e-73, Method: Composition-based stats. Identities = 107/321 (33%), Positives = 164/321 (51%), Gaps = 11/321 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 +++ I++ L G++ G G ++ N W GFD+D RA++ ++ D KI ++PL Sbjct: 5 AVIKRIEQHDVLNVGVSLGFKGLSQRDPLNNSWNGFDIDLARAVAISVLGDGGKIHFIPL 64 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 + +RF AL+ ID+ + N T RE G+ F FDG+ + + Q Sbjct: 65 QSADRFQALRDGVIDLGTFNASVTFQREAEYGINFLHPMLFDGEVLMTPRSNLTEETPQA 124 Query: 144 S---GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 I G+TTE L YF N+ ++F+ ++ AY + CD Y D Sbjct: 125 RFTRQRRIAAMRGSTTEENLTRYFDELNLPCEILLFDSPQQARQAYESGECDIYCLDGYL 184 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L S+H+IL D IS +APA+ D++WY W A++ AE LGITQK Sbjct: 185 LAGEHHQLTDSSQHLILDDRISLEAMAPAVSASDSQWYIATKWVMRALIEAENLGITQKT 244 Query: 261 INQVSKDTTNPD--VQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318 + + NP+ ++ FL D N+ LGL D+ IIR +GNYGE+F+RNLG S Sbjct: 245 ---FLEKSDNPEGYLKTFLYPDV--NLCSQLGLQPDFIREIIRKIGNYGEIFERNLGKNS 299 Query: 319 ELKIPRGYNALWSKGGLMYAP 339 ELK R N W++GG++++P Sbjct: 300 ELKQQRRDNKPWAEGGMLWSP 320 >gi|300721866|ref|YP_003711144.1| putative Amino-acid binding protein [Xenorhabdus nematophila ATCC 19061] gi|297628361|emb|CBJ88926.1| putative Amino-acid binding protein [Xenorhabdus nematophila ATCC 19061] Length = 323 Score = 279 bits (715), Expect = 4e-73, Method: Composition-based stats. Identities = 105/320 (32%), Positives = 170/320 (53%), Gaps = 7/320 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 ++++ IK L G++ G G + N W+GFD+D +A++ A+ + KI ++P Sbjct: 4 SAVIQRIKTHNILNAGVSLGFRGLSFRDNYNSQWEGFDIDLAKAVAIAVLGNSKKINFIP 63 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 L + RF AL+ ID+ N+ T E ++F FDG+ + H+ I++VS+ Sbjct: 64 LQSGNRFQALKDNIIDLGCFNSSITFQSESEYNVSFAHPMLFDGEVLMTHENNLINNVSE 123 Query: 143 L---SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 I G+TT+ L YF + + ++FE ++ AY+ C+ Y D Sbjct: 124 ARSTKKREIAAMRGSTTQENLERYFAELGLNCNIMLFESPQDAREAYQKGICNIYCLDSY 183 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L ++ + P +H+ L D IS ++PA+ D +W+ VSW A++ AE LGIT+ Sbjct: 184 LLAGERIQLEAPEKHLFLKDRISLEAMSPAVSLHDPQWHASVSWIMKALIEAENLGITRN 243 Query: 260 NINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSE 319 N+N +T + +FL S + LGL ++TY+IIR +GNYGE+F+RNLG S Sbjct: 244 NVNDKYNISTGY-INKFL--KPSEELCNNLGLQTEFTYKIIRELGNYGEIFERNLGKSSI 300 Query: 320 LKIPRGYNALWSKGGLMYAP 339 L R N WSKGG++Y+P Sbjct: 301 LNQERKDNKPWSKGGMLYSP 320 >gi|282899859|ref|ZP_06307820.1| hypothetical protein CRC_01252 [Cylindrospermopsis raciborskii CS-505] gi|281195129|gb|EFA70065.1| hypothetical protein CRC_01252 [Cylindrospermopsis raciborskii CS-505] Length = 9381 Score = 277 bits (709), Expect = 2e-72, Method: Composition-based stats. Identities = 105/327 (32%), Positives = 168/327 (51%), Gaps = 17/327 (5%) Query: 27 LGDIKKRGFLKCGINT----GLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 L +I+ RGF+K G+ G GFAE+ + G +KGFDVD +A+++A+F DPSK++Y Sbjct: 8646 LAEIQNRGFIKYGLPQITGSGFPGFAEIDSQGQYKGFDVDLSKAIAAAVFGDPSKVEYTQ 8705 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 F + +D+ + L+R+ LG+ + P+ GQG + K GI+ ++ Sbjct: 8706 QAFANSFANTANGLVDVSAAGYTGNLMRDAGLGVDYSPVYIHTGQGILTRKDSGITGIAT 8765 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+G++I T L+D K F+ ++ AAY DA D + L Sbjct: 8766 LNGSTIGALTTVTAIENLSDLTKKFGSTIIITPFDDKNKMYAAYEKGEIDAVYNDKTLLA 8825 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 + T P H ILP+ SK PL + + ++W ++V W ++V AEE GIT NI+ Sbjct: 8826 GIIPTLSDPQAHEILPETFSKEPLTLILDENQSDWADVVRWVMNSLVQAEEYGITSTNID 8885 Query: 263 QVSKD--TTNP------DVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNL 314 + +P ++Q FLG+ N G +LGL+ D+ ++I+ +GNYGE++ RN Sbjct: 8886 DIIAKNRDNDPNNNSIKEIQAFLGLQG--NPGASLGLSSDFVVKMIKAVGNYGEIYARNF 8943 Query: 315 GNQSELKIPRGYNALWSKGGLMYAPPI 341 +PR N L+ GL YA P+ Sbjct: 8944 DTN---ILPREKNDLYHFSGLQYALPL 8967 Score = 241 bits (616), Expect = 1e-61, Method: Composition-based stats. Identities = 94/338 (27%), Positives = 169/338 (50%), Gaps = 29/338 (8%) Query: 17 FTSFSTNASILGDIKKRGFLKC-GINTGLVGFAEVKANGDWKG-FDVDFCRALSSAIFDD 74 T+ + ++L +I++RG+++ G + + G FD F RA+++AIF D Sbjct: 8307 VTTSANPDNLLAEIQQRGYIRFSGGRSDSI-----------SGVFDYQFVRAIAAAIFGD 8355 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 +++ +P E F + +KQ+D+ +R+ L+R+ L + F P+ Y+D ++ K Sbjct: 8356 ANRVDQVPGTFSESFSQVANKQVDLSTRHITQNLVRDGELNVDFGPVYYYDFLSVLVRNK 8415 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 GI L+G I V TT L + + +++ VF+ ++ AAY DA Sbjct: 8416 SGIQGAKDLNGKKIGVVKNTTALTNLDNLLDSIGVQFTAEVFDTQNDLYAAYNLGEVDAI 8475 Query: 195 TGDISALY--ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 D +Y + + EH L SK P+ I + ++EW ++V W Y + AE Sbjct: 8476 ASDKGIIYDALEREILENKQEHRFLDIQFSKEPIGLVIPENESEWGDVVRWVVYTTIQAE 8535 Query: 253 ELGITQKNINQVSKDTT--------NPDVQRFLGIDK-SSNIGEALGLTKDWTYRIIRHM 303 E GI +NI+++ D T +P ++RFLG++ ++G AL L +D+ ++I+ + Sbjct: 8536 EYGINSQNIDRLLADNTDDNSKNDSDPAIRRFLGLEGLEGSLGSALELPQDFVVQVIKQV 8595 Query: 304 GNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341 GNYGE++ R+ + + R N L GGL+ + P Sbjct: 8596 GNYGEIYQRSFPS-----LTRDLNLLSLTGGLLESLPF 8628 >gi|218516840|ref|ZP_03513680.1| general L-amino acid ABC transporter, substrate-binding protein [Rhizobium etli 8C-3] Length = 211 Score = 275 bits (703), Expect = 8e-72, Method: Composition-based stats. Identities = 118/211 (55%), Positives = 167/211 (79%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 + + + +A+ LGD+K +GF++CG+NTGL GFA A+G+W GFDVDFC+A++SA+F D Sbjct: 1 MALGAPAASATTLGDVKAKGFVQCGVNTGLAGFAAPDASGNWAGFDVDFCKAVASAVFGD 60 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 P+K+++ PL+A RF ALQS +ID+L+RNT W++ R+ +LGL FR + Y+DGQGF++ K Sbjct: 61 PTKVKFTPLSAANRFPALQSGEIDVLARNTTWSINRDTALGLNFRFVNYYDGQGFMVRKS 120 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 + S +LSGAS+CVQ+GTTTEL LADYFKA+N++Y+P+VFE+++E++AAY A RCD Y Sbjct: 121 LNVKSALELSGASVCVQSGTTTELNLADYFKANNLQYNPVVFEKLDEVNAAYDAGRCDVY 180 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSP 225 T D S LY+L+LT P EH ILP+IISK P Sbjct: 181 TTDQSGLYSLRLTLKNPDEHAILPEIISKEP 211 >gi|71735465|ref|YP_276122.1| amino-acid binding protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71556018|gb|AAZ35229.1| amino-acid binding protein, putative [Pseudomonas syringae pv. phaseolicola 1448A] Length = 317 Score = 272 bits (695), Expect = 7e-71, Method: Composition-based stats. Identities = 102/311 (32%), Positives = 167/311 (53%), Gaps = 3/311 (0%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 DIKKRG+L+ G++ GL+G + + G+W GFDVD RA+S AIF D I+Y PL + +R Sbjct: 7 DIKKRGYLRVGVSLGLIGLSSKNSEGEWSGFDVDLARAVSVAIFGDDQCIEYFPLASNDR 66 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 F ALQ ID+ N+ T RE + F FDG+ + G+S + Sbjct: 67 FDALQQNIIDLGCFNSSITFSRETISEVKFCHPMLFDGEMLMTKSAGGMSRPIVSGEIRV 126 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 G+TT L YF+ N+K +++ ++ AY C+ Y D L + Sbjct: 127 AALEGSTTGDNLNRYFREQNLKGVVHLYKTFDDARNAYNLDVCNYYCLDGYLLSGEQTKL 186 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 +HVIL +IS+ ++PA + T+ + V+W +++ +E +GI N+N + Sbjct: 187 RDSRDHVILEQMISREAMSPATLSSKTQLTSAVTWVLRSIIESENIGINSHNLNAFYE-L 245 Query: 269 TNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNA 328 N ++++L D I LG++ +T +++++GNY E+F+R+LG++S L+ R N Sbjct: 246 ENWYIRKYLHPDP--RISSKLGISPSFTADVVKNVGNYEEIFERHLGSKSILRQTRRENR 303 Query: 329 LWSKGGLMYAP 339 L S GGL+Y+P Sbjct: 304 LRSVGGLLYSP 314 >gi|320327184|gb|EFW83198.1| amino-acid binding protein, putative [Pseudomonas syringae pv. glycinea str. race 4] Length = 317 Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats. Identities = 101/311 (32%), Positives = 167/311 (53%), Gaps = 3/311 (0%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 DIKKRG+L+ G++ GL+G + + G+W GFDVD RA+S AIF D I+Y PL + +R Sbjct: 7 DIKKRGYLRVGVSLGLIGLSSKNSEGEWSGFDVDLARAVSVAIFGDDQCIEYFPLASNDR 66 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 F ALQ ID+ N+ T RE + F FDG+ + G+S + Sbjct: 67 FDALQQNIIDLGCFNSSITFSRETISEVKFCHPMLFDGEMLMTKSAGGMSRPIVSGEIRV 126 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 G+TT L YF+ ++K +++ ++ AY C+ Y D L + Sbjct: 127 AALEGSTTGDNLNRYFREQHLKGVVHLYKTFDDARNAYNLDVCNYYCLDGYLLSGEQTKL 186 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 +HVIL +IS+ ++PA + T+ + V+W +++ +E +GI N+N + Sbjct: 187 RDSRDHVILEQMISREAMSPATLSSKTQLTSAVTWVLRSIIESENIGINSHNLNAFYE-L 245 Query: 269 TNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNA 328 N ++++L D I LG++ +T +++++GNY E+F+R+LG++S L+ R N Sbjct: 246 ENWYIRKYLHPDP--RISSKLGISPSFTADVVKNVGNYEEIFERHLGSKSILRQTRRENR 303 Query: 329 LWSKGGLMYAP 339 L S GGL+Y+P Sbjct: 304 LRSVGGLLYSP 314 >gi|320325529|gb|EFW81591.1| amino-acid binding protein, putative [Pseudomonas syringae pv. glycinea str. B076] Length = 346 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 101/311 (32%), Positives = 166/311 (53%), Gaps = 3/311 (0%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 DIKKRG+L+ G++ GL+G + + G+W GFDVD RA+S AIF D I+Y PL + +R Sbjct: 36 DIKKRGYLRVGVSLGLIGLSSKNSEGEWSGFDVDLARAVSVAIFGDDQCIEYFPLASNDR 95 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 F ALQ ID+ N+ T RE + F FDG+ + G+S + Sbjct: 96 FDALQQNIIDLGCFNSSITFSRETISEVKFCHPMLFDGEMLMTKSAGGMSRPIVSGEIRV 155 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 G+TT L YF+ N+K +++ ++ AY C+ Y D L + Sbjct: 156 AALEGSTTGDNLNRYFREQNLKGVVHLYKTFDDARNAYNLDVCNYYCLDGYLLSGEQTKL 215 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 +HVIL +IS+ ++PA + + + V+W +++ +E +GI N+N + Sbjct: 216 RDSRDHVILEQMISREAMSPATLSSKIQLTSAVTWVLRSIIESENIGINSHNLNAFYE-L 274 Query: 269 TNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNA 328 N ++++L D I LG++ +T +++++GNY E+F+R+LG++S L+ R N Sbjct: 275 ENWYIRKYLHPDP--RISSKLGISPSFTADVVKNVGNYEEIFERHLGSKSILRQTRRENR 332 Query: 329 LWSKGGLMYAP 339 L S GGL+Y+P Sbjct: 333 LRSVGGLLYSP 343 >gi|297192982|ref|ZP_06910380.1| ABC transporter amino acid-binding protein [Streptomyces pristinaespiralis ATCC 25486] gi|197723387|gb|EDY67295.1| ABC transporter amino acid-binding protein [Streptomyces pristinaespiralis ATCC 25486] Length = 352 Score = 268 bits (686), Expect = 7e-70, Method: Composition-based stats. Identities = 100/321 (31%), Positives = 162/321 (50%), Gaps = 19/321 (5%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + L K RG ++ ++ G+ G + G W G D D RA+++A +D I + Sbjct: 50 PATTATLRSAKVRGAVRVAVSQGVRGLSLRTPAGRWTGLDTDIARAVAAAALEDAEAIDW 109 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +P+ A +R L+S + D+ N WT+ RE + + F IT +DG+GF++ G++ Sbjct: 110 VPVRATDRLRTLESGRADLTVCNLTWTMGREATGAVLFAGITCYDGEGFLVRAADGLADP 169 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + L+G + V G TT + L ++ ++ P+ F+ + AAY C AY D +A Sbjct: 170 ADLAGRRLAVHNGCTTVVNLESWYGPLGLEVEPVGFDDPADALAAYACGDCAAYVLDRTA 229 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L + RP +H ILP IS+ P+A A+ + D W+ +V W +V AE G Sbjct: 230 LAGARACLPRPQDHRILPVSISREPMAAAVHEADPHWFRLVRWVLQLLVAAEHEG----- 284 Query: 261 INQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSEL 320 P+ L + G + GL + W R++ +G YG++++RNLG S L Sbjct: 285 ----------PEAAARL----AGPHGPSAGLDEKWADRVLSAVGTYGDVYERNLGAASGL 330 Query: 321 KIPRGYNALWSKGGLMYAPPI 341 +PRG N LW+ GGL YA P+ Sbjct: 331 DVPRGVNELWTAGGLHYAVPL 351 >gi|329295742|ref|ZP_08253078.1| amino-acid ABC transporter-binding protein yhdW precursor [Plautia stali symbiont] Length = 216 Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats. Identities = 94/218 (43%), Positives = 143/218 (65%), Gaps = 2/218 (0%) Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 +G F + Y+DG GF+ HKK + S +L GA++C+Q GT TEL +ADYFKA+ M+Y P Sbjct: 1 MGFLFAGVNYYDGIGFLTHKKASLKSAKELDGATVCIQVGTDTELNVADYFKANKMQYTP 60 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + F+R +E A + RCD + D S LYA ++ +P + ++L ++ISK PL P + +G Sbjct: 61 VTFDRSDESAKALDSGRCDTLSSDQSQLYAQRIKLGKPDDFIVLAEVISKEPLGPVVRRG 120 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTK 293 D +W+ IV W+ +AM+ AEE+GI+ K++++++ T PD+ LG + + G+ L L Sbjct: 121 DDDWFTIVKWSLFAMLNAEEMGISSKSVDEMAAKPTTPDMAHLLGAEG--DFGKDLKLDN 178 Query: 294 DWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWS 331 Y II+ +GNY E+FDRN+G S LKI RG NALW+ Sbjct: 179 KCAYNIIKQVGNYQEVFDRNVGKDSALKIARGQNALWN 216 >gi|119488696|ref|ZP_01621705.1| extracellular solute-binding protein, family 3 [Lyngbya sp. PCC 8106] gi|119455119|gb|EAW36260.1| extracellular solute-binding protein, family 3 [Lyngbya sp. PCC 8106] Length = 607 Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 101/321 (31%), Positives = 177/321 (55%), Gaps = 13/321 (4%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL-PL 83 ++L ++ RGF++ G+ G + NG+ GFDVD RAL++++F DP+ ++++ Sbjct: 295 NVLQEVLDRGFVRVGVRNDAQGLGFAEENGNLTGFDVDLGRALAASLFGDPNAVEFVIQT 354 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 +RF + + +D+ SRN L R+ LG+ F PI +D Q + GI+++ QL Sbjct: 355 TGSQRFSDVANGVVDVTSRNATHNLRRDALLGVDFAPINTYDAQFVVTPTASGITTLEQL 414 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 +G I V AGTT+E L + A + + + + I +Y DA TGD + + Sbjct: 415 AGGRIGVSAGTTSETRLQEKLSAAGINAEVVALDNFQTIFDSYINGELDAITGDGGLIIS 474 Query: 204 LKLTND--RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 LT + S+H P+++ + PLA + + ++W ++VS YA+ A ELG+T +N+ Sbjct: 475 SLLTLPVEQRSQHQPFPEVLGEEPLAMVVDENQSQWKDVVSGVTYAVTEALELGLTSENV 534 Query: 262 NQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNL-GNQSEL 320 +++NP ++RFLG++ N+GE+LGL D+ I +GNY EM +RN G + E Sbjct: 535 -TAELESSNPVIRRFLGVEG--NVGESLGLPNDFALNAISAVGNYREMTERNFPGIELEG 591 Query: 321 KIPRGYNALWSKGGLMYAPPI 341 +P +++GG +++ P Sbjct: 592 ILP------YTEGGTLFSVPF 606 Score = 242 bits (618), Expect = 6e-62, Method: Composition-based stats. Identities = 93/283 (32%), Positives = 158/283 (55%), Gaps = 9/283 (3%) Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D+ RAL++A+FD+P+ ++++ + A E F ++ S +DI + ++LR+ +LG+ F P Sbjct: 3 IDYSRALATALFDNPNSVEFVVVEAGEDFNSVASGTVDIAATLPTHSVLRDATLGVDFSP 62 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +FD QG ++ GI+SV QL ++ V AGT ++ L D + + + F + Sbjct: 63 TVFFDTQGVLVRGDSGINSVEQLQETTVGVLAGTRSQQNLEDAAQRAGITLNIQTFPSQD 122 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 ++ AAY A + + + L T P VIL + I K PLA + + ++E+ ++ Sbjct: 123 DLFAAYDAGEIGSVSINRGVLSNRIPTLSNPGNQVILEENIGKEPLAFIVPENESEFADV 182 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V W A + AE GI +N+N+ N D++RFLG+ S N+GE+LG+ D+ II Sbjct: 183 VRWVVNAPIQAEFFGINSQNVNEFL--DGNSDIKRFLGV--SGNLGESLGIDNDFALNII 238 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNAL--WSKGGLMYAPPI 341 + +GNY E+++RN + +PR N L GGL+Y PP Sbjct: 239 QQVGNYEEIYNRNFDETA---LPRNLNELMFVEPGGLVYYPPF 278 >gi|256395455|ref|YP_003117019.1| extracellular solute-binding protein family 3 [Catenulispora acidiphila DSM 44928] gi|256361681|gb|ACU75178.1| extracellular solute-binding protein family 3 [Catenulispora acidiphila DSM 44928] Length = 321 Score = 265 bits (678), Expect = 6e-69, Method: Composition-based stats. Identities = 100/315 (31%), Positives = 161/315 (51%), Gaps = 19/315 (6%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L + G ++ ++ G+ G + A G W+G D D RA+++A D + +L Sbjct: 25 LAAARATGTVRAVVSRGIRGLSSPDAAGVWRGLDTDMARAVAAAAIGDGEAVSWLSTEPA 84 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 R L + + D++ N WTL RE + G+ F +T +DG+GF++ GI+ +QL+G Sbjct: 85 ARLDRLVAGEADLVVSNLTWTLGRETA-GVLFAGVTCYDGEGFLVRASDGITDPAQLAGR 143 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 + QAGTT+ LA +F + + PI + + A Y + C AY D AL + Sbjct: 144 QVATQAGTTSAANLAAWFGSRGLAVTPIAYPTPADALAGYASGDCAAYVLDCVALAGERA 203 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 D P EH IL IS+ P+A A+ D EW+ + W ++ AE ++ + ++ Sbjct: 204 ALDDPGEHRILDTTISREPMAMAVRDDDAEWFRLCRWVLQFLIAAEH----AEDPAEAAR 259 Query: 267 DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGY 326 D + G ALGL ++W R++ +G YG+++ RNLG S L +PRG Sbjct: 260 D--------------AGRHGPALGLDENWAARVLDAVGTYGDVYARNLGPASGLDVPRGL 305 Query: 327 NALWSKGGLMYAPPI 341 NALW++GGL Y P+ Sbjct: 306 NALWTEGGLHYPMPL 320 >gi|193083731|gb|ACF09418.1| amino acid ABC transporter periplasmic amino acid-binding protein [uncultured marine group II euryarchaeote SAT1000-15-B12] Length = 374 Score = 265 bits (678), Expect = 6e-69, Method: Composition-based stats. Identities = 109/339 (32%), Positives = 169/339 (49%), Gaps = 15/339 (4%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 T+ + S L I RG +KCG+ G + +G + G D+++C+AL++AI D Sbjct: 40 AAGTADAQLVSTLDTIIARGSMKCGVKDSQFGMGFLNDDGTYSGLDIEYCKALAAAIGVD 99 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 I+Y+ RF L S +ID+L R T WT R+ L F + ++DGQG +++ Sbjct: 100 S--IEYILATGSNRFELLASHEIDVLIRTTTWTTSRDAGLNADFAGMNFYDGQGMLVNTG 157 Query: 135 ----KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190 G +S L GA+ICV GTTTE L DY++ + M+ I E + Sbjct: 158 PDHFPGATSALDLDGANICVGIGTTTEGNLLDYYELNQMQMTTINTENAAAAQENFLDGS 217 Query: 191 CDAYTGDISALYALKLTNDRPS-EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 C +TGD+SA+ A I+P+++SK PL A D +W ++V+W Y M+ Sbjct: 218 CGVWTGDMSAMVARMYGLRDEGMSLAIMPELLSKEPLGAATRDNDDDWNDVVAWVWYGMI 277 Query: 250 TAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEM 309 TAEE GI N ++ NP + R L + + L+ W ++ +GNY + Sbjct: 278 TAEEFGIDGSNYMDFV-NSENPGINRLLNSNLGLGT-DDNPLSDTWMQSVLGAVGNYHDA 335 Query: 310 FDRNLGNQ----SELKIPR--GYNALWSKGGLMYAPPIR 342 +DR+ + + I R NAL S+GG+ YAPP+R Sbjct: 336 YDRSFCDGDGGMNNCLISRAGTLNALVSEGGIQYAPPMR 374 >gi|193083904|gb|ACF09583.1| amino acid ABC transporter periplasmic amino acid-binding protein [uncultured marine group II euryarchaeote KM3-72-G3] Length = 470 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 115/361 (31%), Positives = 173/361 (47%), Gaps = 38/361 (10%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPS- 76 + +T S L I RG +KCG+ G + A G G D+ +CRA+++A+ +P Sbjct: 111 AEATPVSTLDTIVDRGSMKCGVKESQYGMGYLDAGTGVRSGLDISYCRAVAAALGLNPDT 170 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK- 135 ++Y+P + +RF L S ID+L R T WT R+ L F + +FDGQG ++ Sbjct: 171 DVEYIPASGSDRFDKLASGTIDVLIRTTTWTTSRDADLNADFAGMNFFDGQGILVRSDAY 230 Query: 136 --GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 G S QL+ A ICV GTTTE + D+F + N+++ + E A + CDA Sbjct: 231 EYGTGSADQLNNAEICVGIGTTTEGNMVDWFSSRNIQFTSVPVADAAEATAKFIDGSCDA 290 Query: 194 YTGDISALYALKLTNDRPSEHV----------ILPDIISKSPLAPAIIQGDTEWYNIVSW 243 +TGD+SA+ A K D + V I +++SK PL A D+++ ++V+W Sbjct: 291 FTGDMSAMVAKKWQLDGDASMVDDNGDPVSIWIAQELMSKEPLGAATRDMDSDFKDVVAW 350 Query: 244 THYAMVTAEELGITQKNINQV---------SKDTTNPDVQRFLGIDKSSNIGEALGLTKD 294 Y MVTAEE+G+T N T++P + R L + L D Sbjct: 351 VWYGMVTAEEMGVTAANAADSAATACALNEGGATSDPGMCRLL-TENLGLGTATNPLAGD 409 Query: 295 WTYRIIRHMGNYGEMFDRNLGNQ-----------SELKIPRG--YNALWSKGGLMYAPPI 341 W ++ GNYGE +D + S I R NAL S+GG+ YAP + Sbjct: 410 WMQAVLATAGNYGEAYDDAFCDGTYDGVSGSDAMSGCLISRSGTLNALVSEGGIQYAPAM 469 Query: 342 R 342 R Sbjct: 470 R 470 >gi|320106917|ref|YP_004182507.1| family 3 extracellular solute-binding protein [Terriglobus saanensis SP1PR4] gi|319925438|gb|ADV82513.1| extracellular solute-binding protein family 3 [Terriglobus saanensis SP1PR4] Length = 336 Score = 263 bits (672), Expect = 3e-68, Method: Composition-based stats. Identities = 101/338 (29%), Positives = 170/338 (50%), Gaps = 7/338 (2%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 VS+L L + + L ++ G L CG+ + +G GFD+D C+A Sbjct: 4 VSLLLLAVCSSLTLGAQ-QTLQKVRAAGVLTCGVIAEDAEYNTEDDHGSRGGFDLDLCKA 62 Query: 67 LSSAIFDDPSKIQYLP-LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ A + ++ + + L+ K AL + +ID++ + L +D Sbjct: 63 VAVAALGEKAQTKVITFLDDKSGVDALIAGKIDLI-ATLSADFSHTTNASLGESAPVLYD 121 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 G GF++ +K GI+ + L+ +C A T E L +F ++ P F+ E++AA Sbjct: 122 GVGFLVLRKSGIAHAADLTHRKVCFLAETNVETALQAWFTRQHLDLLPFPFQEEGEMEAA 181 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPS-EHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 Y C A GD++ L + + + + +H+ILP++I+ PLA A D +W IV WT Sbjct: 182 YITKNCAAIAGDLTRLAQTRASFETQAPDHMILPEVIAADPLAFAYRSSDPQWGRIVDWT 241 Query: 245 HYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMG 304 + E LG+T NI+ +S + +P V+ LG + +G LGL++DW ++R +G Sbjct: 242 AQVLFHGEALGVTSANID-ISAKSADPAVRHLLGA--THAVGTPLGLSEDWAASVLRSVG 298 Query: 305 NYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 NY E+FDR G S L + RG N L S+GGL+ P++ Sbjct: 299 NYREVFDRTFGEASTLSLTRGRNRLTSEGGLILPLPLK 336 >gi|193084366|gb|ACF10022.1| amino acid ABC transporter periplasmic amino acid-binding protein [uncultured marine group II euryarchaeote AD1000-18-D2] Length = 394 Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats. Identities = 113/352 (32%), Positives = 174/352 (49%), Gaps = 29/352 (8%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPS- 76 + +T S L I RG +KCG+ G + A G G D+ +CRA+++A+ +P Sbjct: 44 AEATPVSTLDTIIDRGSMKCGVKESQYGMGYLDAGTGVRSGLDISYCRAVAAALGLNPDT 103 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK- 135 ++Y+P + +RF L S ID+L R T WT R+ L F + +FDGQG ++ + Sbjct: 104 DVEYIPASGSDRFDKLASGTIDVLIRTTTWTTSRDADLNADFAGMNFFDGQGILVREDAY 163 Query: 136 ----GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191 +S L GA+ICV GTTTE + D+F + N+ + + E A + C Sbjct: 164 SAAGAGNSAGGLDGANICVGIGTTTEGNMVDWFSSRNIAFTSVPVADAAEATAKFIDGSC 223 Query: 192 DAYTGDISALYALKLTNDRPS-----EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 DA+TGD+SA+ A K D + I +++SK PL A D+++ ++V+W Y Sbjct: 224 DAFTGDMSAMVAKKWQLDGDGSMNGVDIWIAQELMSKEPLGAATRDMDSDFKDVVAWVWY 283 Query: 247 AMVTAEELGITQKNINQVSK---DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHM 303 MVTAEE+G+T N + D ++P + R L + A L DW ++ Sbjct: 284 GMVTAEEMGVTAANAADSAAAACDGSDPGMCRLL-TENLGLGTAANPLAGDWMQAVLATA 342 Query: 304 GNYGEMFDRNLGNQSELK-----------IPRG--YNALWSKGGLMYAPPIR 342 GNYGE +D + + I R NAL S+GG+ YAP +R Sbjct: 343 GNYGEAYDDAFCDGTYDGVSGSDAMTGCLISRSGTLNALVSEGGIQYAPAMR 394 >gi|193084292|gb|ACF09951.1| amino acid ABC transporter periplasmic amino acid-binding protein [uncultured marine group II euryarchaeote KM3-130-D10] Length = 394 Score = 257 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 113/352 (32%), Positives = 174/352 (49%), Gaps = 29/352 (8%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPS- 76 + +T S L I RG +KCG+ G + A G G D+ +CRA+++A+ +P Sbjct: 44 AEATPVSTLDTIIDRGSMKCGVKESQYGMGYLDAGTGVRSGLDISYCRAVAAALGLNPDT 103 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-- 134 ++Y+P + +RF L S ID+L R T WT R+ L F + +FDGQG ++ + Sbjct: 104 DVEYIPASGSDRFDKLASGTIDVLIRTTTWTTSRDADLNADFAGMNFFDGQGILVREDVF 163 Query: 135 ---KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191 +S L GA+ICV GTTTE + D+F + N+ + + E A + C Sbjct: 164 PAAAAGNSAGGLDGANICVGIGTTTEGNMVDWFSSRNIAFTSVPVADAAEATAKFIDGSC 223 Query: 192 DAYTGDISALYALKLTNDRPS-----EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 DA+TGD+SA+ A K D + I +++SK PL A D+++ ++V+W Y Sbjct: 224 DAFTGDMSAMVAKKWQLDGDDSMGGVDIWIASELMSKEPLGAATRDMDSDFKDVVAWVWY 283 Query: 247 AMVTAEELGITQKNINQVSK---DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHM 303 MVTAEE+G+T N + D ++P + R L + A L DW ++ Sbjct: 284 GMVTAEEMGVTAANAAASAAAACDGSDPGMCRLL-TENLGLGTAANPLAGDWMQAVLATA 342 Query: 304 GNYGEMFDRNLGNQSELK-----------IPR--GYNALWSKGGLMYAPPIR 342 GNYGE +D + + I R NAL S+GG+ YAP +R Sbjct: 343 GNYGEAYDDAFCDGTYDGVSGSAAMTGCLISRVGTLNALVSEGGIQYAPAMR 394 >gi|7381255|gb|AAF61456.1|AF139661_1 putative amino acid ABC transporter binding protein [Azospirillum brasilense] Length = 236 Score = 257 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 96/236 (40%), Positives = 138/236 (58%), Gaps = 4/236 (1%) Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKA 166 L R+ + G+ F + FDGQGFI H+ +GI+ +S L GAS+CV TTT L D+ Sbjct: 1 LQRDATFGIDFPAVYLFDGQGFIAHRAQGIARLSDLPPGASVCVIEQTTTLRNLEDWMAR 60 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL-TNDRPSEHVILPDIISKSP 225 +++ E +A+ H CD YT D L+A +L ++VILP+ ISK P Sbjct: 61 TGLRFRLKPVRSTEGALSAFFNHHCDLYTSDRIGLHAQRLLKAPEREDYVILPEAISKEP 120 Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNI 285 L P + + W+++V W A V AEE GIT N ++ ++ +P+V+RFLG ++ + Sbjct: 121 LGPMVRPDERRWFDVVRWVFLATVLAEEKGITTANAARLKEEAQDPEVRRFLGA--TAGV 178 Query: 286 GEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341 G LGL W +R++ +GNYGE+FDR+LG S L I RG N LW GGL YAPP+ Sbjct: 179 GWGLGLDDGWAFRVVTQVGNYGEIFDRHLGAASPLGIDRGMNGLWMNGGLHYAPPL 234 >gi|170516837|gb|ACB15239.1| hypothetical protein [uncultured marine group II euryarchaeote DeepAnt-15E7] Length = 393 Score = 254 bits (648), Expect = 2e-65, Method: Composition-based stats. Identities = 110/359 (30%), Positives = 172/359 (47%), Gaps = 36/359 (10%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPS- 76 + +T S L I RG +KCG+ G + A G G D+ +CR +++A+ +P Sbjct: 36 AEATPVSTLDTIIARGSMKCGVKESQYGMGYLDAGTGVRSGLDISYCRGVAAALGLNPDT 95 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK- 135 ++Y+P + +RF L S ID+L R T WT R+ L F + +FDGQG ++ + Sbjct: 96 DVEYIPASGSDRFDKLASGTIDVLIRTTTWTTSRDADLNADFAGMNFFDGQGILVREDAF 155 Query: 136 ----GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191 +S S L+GA+ICV GTTTE + D+F + + + + E A + C Sbjct: 156 GAEASGNSASALNGANICVGIGTTTEGNMVDWFSSRGIAFTSVPVADAAEATAKFIDGSC 215 Query: 192 DAYTGDISALYALKLTNDRPSEH-----------VILPDIISKSPLAPAIIQGDTEWYNI 240 DA+TGD+SA+ A K D + I +++SK PL A D+++ ++ Sbjct: 216 DAFTGDMSAMVAKKWQLDGDASMGVDENGDAIGIWIASELMSKEPLGAATRDMDSDFKDV 275 Query: 241 VSWTHYAMVTAEELGIT----QKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWT 296 V+W Y MVTAEE+G+T + D ++P + R L + L DW Sbjct: 276 VAWVWYGMVTAEEMGVTAANAAASATAACADGSDPGMCRLL-TENLGLGTATNPLAGDWM 334 Query: 297 YRIIRHMGNYGEMFDRNLGNQSELK-----------IPR--GYNALWSKGGLMYAPPIR 342 ++ GNYGE +D + + I R NAL S+GG+ YAP +R Sbjct: 335 QAVLATAGNYGEAYDDAFCDGTYDGVSGSAAMTGCLISRVGTLNALVSEGGIQYAPAMR 393 >gi|161170240|gb|ABX59211.1| substrate-binding protein [uncultured marine group II euryarchaeote EF100_57A08] Length = 439 Score = 252 bits (645), Expect = 5e-65, Method: Composition-based stats. Identities = 117/351 (33%), Positives = 175/351 (49%), Gaps = 34/351 (9%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDP-SKIQYLP 82 S + I +RG LKCG+ G + A G G D+ +CRAL++AI DP + I+++P Sbjct: 90 STMDVILERGMLKCGVKESQYGMGYLDSATGVRSGLDISYCRALAAAIGLDPMTDIEFVP 149 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 ++++RF L S +ID+L R T WT R+ L F + +FDGQG ++ + ++Q Sbjct: 150 ASSQDRFEKLASGEIDVLIRTTTWTTSRDADLNADFAGMNFFDGQGILIREDTYPQGLTQ 209 Query: 143 ----LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 L+ A +CV GTTTE LAD+ ++++ I E A ++ CDA+TGD+ Sbjct: 210 TATMLTSAKVCVGTGTTTEGNLADFDTSNSVGMDIIGVVDAAEGTAKLQSGECDAFTGDM 269 Query: 199 SALYALKLTNDRPSEHV----------ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 SA+ A K D V I P+I+SK PL A D +W ++V+W Y M Sbjct: 270 SAMVAKKWALDNDGTVVDDNGDPVGLWIAPEILSKEPLGAATRDNDDDWNDVVAWVWYGM 329 Query: 249 VTAEELGITQKNINQVSKDTT----NPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMG 304 VTAEE GIT N ++ D NP R + + L W ++ +G Sbjct: 330 VTAEEYGITSANYMTMASDAAAEGGNPGHNRLMNTNLGLGTDAN-PLADTWMQAVMGAVG 388 Query: 305 NYGEMFDRNLGNQSELK-----------IPRG--YNALWSKGGLMYAPPIR 342 NYGE +D + + + R NAL S+GGL +APP+R Sbjct: 389 NYGEAYDDAFCDGTYDGSSGSDTMTGCLLDRAGTANALVSEGGLQFAPPMR 439 >gi|159904020|ref|YP_001551364.1| hypothetical protein P9211_14791 [Prochlorococcus marinus str. MIT 9211] gi|159889196|gb|ABX09410.1| Hypothetical protein P9211_14791 [Prochlorococcus marinus str. MIT 9211] Length = 215 Score = 239 bits (610), Expect = 5e-61, Method: Composition-based stats. Identities = 88/216 (40%), Positives = 131/216 (60%), Gaps = 6/216 (2%) Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 ++ K ISS+ L ICV +GTTTE + D F+A ++ Y PI ++ + ++ A Y Sbjct: 1 MVKKNSSISSIDDLVNQPICVGSGTTTEQNINDAFEARSIPYTPIKYQDLNQVVAGYLQG 60 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 RC A T D S L A + P EH+IL DI+SK PLAPA + D + + + W Y+++ Sbjct: 61 RCAAMTSDRSQLAAARSGFSNPKEHIILKDILSKEPLAPASLGADQKLGDAMRWVIYSLI 120 Query: 250 TAEELGITQKNINQVSKDTT-NPD---VQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGN 305 +AEE GIT+ NIN+ K NP ++RFLG++ ++GE +GL + +IR GN Sbjct: 121 SAEEKGITKVNINEKLKTAKANPQLKPLRRFLGVEG--DLGEKIGLDNSFVVNVIRATGN 178 Query: 306 YGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341 YGE+++R+LG S + IPRG N L+ KGG+ +PP Sbjct: 179 YGEIYNRHLGPNSNVPIPRGLNELYIKGGVQISPPF 214 >gi|47079429|gb|AAT10172.1| periplasmic substrate binding protein [uncultured marine group II euryarchaeote DeepAnt-JyKC7] Length = 373 Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats. Identities = 99/318 (31%), Positives = 158/318 (49%), Gaps = 16/318 (5%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPS-KI 78 +T S L I RG +KCG+ G + A G G D+ +CR +++A+ +P I Sbjct: 46 ATPVSTLDTIIARGSMKCGVKESQYGMGYLDAGTGVRSGLDISYCRGVAAALGLNPDTDI 105 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK---- 134 +Y+P + +RF L S ID+L R T WT R+ L F + +FDGQG ++ + Sbjct: 106 EYIPASGSDRFDKLASGTIDVLIRTTTWTTSRDADLNADFAGMNFFDGQGILVREDVFPA 165 Query: 135 -KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 +S + L+GA+ICV GTTTE + D+F + N+ + + E A + CDA Sbjct: 166 ADAGNSAAGLNGANICVGIGTTTEGNMVDWFSSRNIAFTSVPVADAAEATAKFIDGSCDA 225 Query: 194 YTGDISALYALKLTNDRPSEHVILP-----DIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 +TGD+SA+ A K D + +++SK PL A D+++ ++V+W Y M Sbjct: 226 FTGDMSAMVAKKWQLDGDDSMGGVGIWIAQELMSKEPLGAATRDMDSDFKDVVAWVWYGM 285 Query: 249 VTAEELGITQKNINQVSK---DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGN 305 VTAEE G+T N ++ D ++P V R L + L W +++ GN Sbjct: 286 VTAEENGVTAANAADMAAAACDGSDPGVCRLL-TENLGLGTTDNPLAGTWMQAVLQAAGN 344 Query: 306 YGEMFDRNLGNQSELKIP 323 YGE +D + + + Sbjct: 345 YGEAYDDAFCDGTYDGVS 362 >gi|239909117|ref|YP_002955859.1| amino acid ABC transporter substrate binding protein precursor [Desulfovibrio magneticus RS-1] gi|239798984|dbj|BAH77973.1| amino acid ABC transporter substrate binding protein precursor [Desulfovibrio magneticus RS-1] Length = 272 Score = 236 bits (602), Expect = 4e-60, Method: Composition-based stats. Identities = 67/272 (24%), Positives = 117/272 (43%), Gaps = 14/272 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 M K +++L + + A L DIK RG L G+ F V GF Sbjct: 1 MRKAARLTVLACLFTLVAAMPALAGKLDDIKSRGTLVAGVKDSQRPFGFVDEKTNQIVGF 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 ++D +AL++ + +K++ P+ + R L +DI++ RE + + Sbjct: 61 EIDLMQALATRL---NAKLELKPVTSSTRIPMLTQGAVDIVAATMTHKKEREDQVDFSI- 116 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ ++ K GI SV+ L+G + G+T+E + K I FE Sbjct: 117 -TYFMTGQKLLVKKDGGIKSVADLAGKKVGSVKGSTSEQNV----KKAQPDCTVISFETY 171 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A + + A T D S L +K ++D+P I+ + IS P + + D+++ + Sbjct: 172 PEAFLALKQGKVQAVTTDESILVGIKNSDDKPEAWDIVGEYISPEPYGLGVAENDSDFRD 231 Query: 240 IVSWTHYAMVTAEELGITQKNIN-QVSKDTTN 270 V+ A++ E G QK + KDT + Sbjct: 232 FVN---AALMDMWEKGEYQKIYDKWFGKDTKD 260 >gi|218888235|ref|YP_002437556.1| extracellular solute-binding protein family 3 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218759189|gb|ACL10088.1| extracellular solute-binding protein family 3 [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 271 Score = 233 bits (595), Expect = 3e-59, Method: Composition-based stats. Identities = 57/271 (21%), Positives = 117/271 (43%), Gaps = 15/271 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59 M + +++ ++L T +A + DIK RG L CG+ V F + GF Sbjct: 1 MKRLVLLAVALCVVL--TGTMAHAGKIEDIKARGALVCGVKDSTVPFGYIDEQSKQIVGF 58 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D C+A++ + K++ + + R L +D+++ R+ + + Sbjct: 59 DIDICKAVADKLG---VKLELKTVTSATRIPMLTQGSVDMVAATMTHKFERDDVIDFSI- 114 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + DGQ ++ K G+ S + L G + G+T+E + KA + + F+ Sbjct: 115 -TYFMDGQKLLVKKGGGVKSAADLKGKKVATAKGSTSEKNI----KAAQPEATVVSFDEY 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + A + + +A T D + L L+ ++ P + I+ D IS P + + D+++ + Sbjct: 170 PQAFLALKQGKAEAVTTDSTILLGLRNSDPEPDKWEIVGDYISPEPYGLGLAENDSKFRD 229 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 +V+ T + + E K ++ T Sbjct: 230 LVNRTLVDLWNSGE---YVKLYDKWFGKDTK 257 >gi|262165601|ref|ZP_06033338.1| amino acid ABC transporter amino acid-binding protein [Vibrio mimicus VM223] gi|262025317|gb|EEY43985.1| amino acid ABC transporter amino acid-binding protein [Vibrio mimicus VM223] Length = 166 Score = 233 bits (594), Expect = 4e-59, Method: Composition-based stats. Identities = 82/169 (48%), Positives = 115/169 (68%), Gaps = 3/169 (1%) Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 +VF+ + + A RCD T D S LYAL+L ++P ++LP+IISK PL P + Q Sbjct: 1 MVFDTAAQTSKGFDAGRCDVLTTDQSGLYALRLNLEKPDSALVLPEIISKEPLGPVVRQD 60 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTK 293 D +W+N+ W YAMV AEE GIT KN++++ K + NP+V+R LG+D G LG+ Sbjct: 61 DDKWFNVAKWVLYAMVNAEEYGITSKNVDEMMK-SDNPEVKRILGLDGPK--GTGLGIRD 117 Query: 294 DWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 DW+Y+I++ +GNYGE F+R +G+ S L+I RG NALW+ GG MYAPPIR Sbjct: 118 DWSYQIVKQVGNYGESFERTVGSGSPLQIDRGVNALWNAGGFMYAPPIR 166 >gi|163868657|ref|YP_001609866.1| amino-acid ABC transporter binding protein [Bartonella tribocorum CIP 105476] gi|161018313|emb|CAK01871.1| amino-acid ABC transporter binding protein [Bartonella tribocorum CIP 105476] Length = 301 Score = 232 bits (592), Expect = 6e-59, Method: Composition-based stats. Identities = 59/274 (21%), Positives = 103/274 (37%), Gaps = 9/274 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + I I + L IK+ G + G+ G A N + GF Sbjct: 1 MKKSLLMFIAAAAIGLTSGAHAENDTLEKIKQTGEITLGVRESS-GLAYALGNNKYVGFH 59 Query: 61 VDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 + + I KI YLP+ ++ R L++K D +T + R A Sbjct: 60 TEMAEHIIDDISKKIGKSIKIHYLPITSQNRIPLLKNKTYDFECGSTTNDIARSKEAAFA 119 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 TY + + K I S+ L+G + GTT+ + +A N+ + + + Sbjct: 120 --YTTYVEEVRIAVKKNSNIKSLDDLNGKIVATTTGTTSVQLIRKNKRAKNIHFKVVKGK 177 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + + R DA+ D S L + PS++VIL ++S P+A + D + Sbjct: 178 DHGDSFLLLESGRADAFVMDASILAGHIAKSKNPSDYVILDTVLSVEPIACMLRLHDKNF 237 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 ++ + + E L +K N+ P Sbjct: 238 EQAINDSILHQIKDESL---EKLYNKWFMKPIPP 268 >gi|56478019|ref|YP_159608.1| putative ABC transporter, glutamate receptor [Aromatoleum aromaticum EbN1] gi|56314062|emb|CAI08707.1| putative ABC transporter, glutamate receptor [Aromatoleum aromaticum EbN1] Length = 298 Score = 232 bits (591), Expect = 7e-59, Method: Composition-based stats. Identities = 54/277 (19%), Positives = 107/277 (38%), Gaps = 11/277 (3%) Query: 1 MYKDFFVSILCLII--LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M+K V LCL + + + ++ L IK G + G V F+ + AN G Sbjct: 1 MHKSLTVIALCLSAAGMVAPAHAQSSGTLQKIKDTGTITVGHRESSVPFSYLDANQKPVG 60 Query: 59 FDVDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + +D C + A+ + +++Y P+ ++ R +Q+ ID+ +T ++ R+ + Sbjct: 61 YAMDLCAKVVDAVKTELKMPNLQVKYQPVTSQNRIPLMQNGTIDLECGSTTNSVARQQQV 120 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 G + + + K GI + L G + GTT++ + K + I Sbjct: 121 GFSVA--YFITSVRMGVRKDSGIDDIGDLDGKPVVTTTGTTSDELIKQNEKGRTINVKNI 178 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + + R A+ D L L + PS I+ + P + + D Sbjct: 179 YGKDHADSFLMVDSGRAAAFVMDDILLAGLIANSKNPSAFEIVGPSLRDEPYGVMVRKDD 238 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + IV T ++ + E +K ++ P Sbjct: 239 APFKAIVDKTLVGLMKSGE---AEKLYDKWFMKPIPP 272 >gi|258406273|ref|YP_003199015.1| extracellular solute-binding protein family 3 [Desulfohalobium retbaense DSM 5692] gi|257798500|gb|ACV69437.1| extracellular solute-binding protein family 3 [Desulfohalobium retbaense DSM 5692] Length = 273 Score = 231 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 61/271 (22%), Positives = 114/271 (42%), Gaps = 13/271 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 M K + + + + A L +IK+RG++ G+ +V F V + + GF Sbjct: 1 MRKMVLLLVAMTVTCTLALGTAWADKLEEIKERGYMVAGVKDAVVPFGYVDKDTNNIVGF 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD C+ L+ + D ++ P+ + R L +DIL+ RE S+ Sbjct: 61 DVDICKELADKLGVD---LRLKPVTSSTRIPMLAQGSVDILAATMTHKFSREDSIDF--S 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ ++ K ISS + L+G + G+T+E + + + + FE Sbjct: 116 TTYFMTGQKLLVKKDSDISSTADLAGKKVGTAKGSTSEKNIKE----AQPESRVLSFEGY 171 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + A R + A T D + L LK + P ++ I+ + IS P + + ++ + + Sbjct: 172 PQAFLALRQGKVKAVTTDATILLGLKNSAPDPDKYAIVGEYISDEPYGLGVPENESNFRD 231 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 V+ + M E Q+ ++ TN Sbjct: 232 FVNRSLAKMWVNGE---YQEIYSKWFGKDTN 259 >gi|78356474|ref|YP_387923.1| extracellular solute-binding protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78218879|gb|ABB38228.1| amino acid ABC transporter substrate-binding protein, PAAT family [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 271 Score = 230 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 63/289 (21%), Positives = 124/289 (42%), Gaps = 19/289 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59 M + +++ + + F++ + +A + +IK RG L G+ +V F V N GF Sbjct: 1 MKRLLLIAV--ALGMIFSAATASAGKIEEIKDRGVLVAGVKDSVVPFGFVDENSKQLVGF 58 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR ++ + + ++ + + R + +DI + R+ + + Sbjct: 59 DVDICRYIAGQLGVE---LELKTVTSATRIPMVTQGSVDIAAATMTHKHERDNVIDFSI- 114 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + DGQ ++ K GI+SV+ L G + G+T+E + KA + F+ Sbjct: 115 -TYFMDGQKILVAKDSGINSVADLKGKKVATVKGSTSEKNI----KAAQPDCRVLSFDEY 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + A + + A T D + L LK ++ P + VI D IS P + + D+++ + Sbjct: 170 PQAMLALKQGKASAVTTDSTILLGLKNSDPEPEKWVIAGDYISAEPYGLGLPENDSDFRD 229 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEA 288 V+ M + E +K N+ PD + +L + + + Sbjct: 230 FVNKALNDMWRSGE---YEKVYNKWFG----PDSRYYLPLTWTMELWPN 271 >gi|242278992|ref|YP_002991121.1| extracellular solute-binding protein family 3 [Desulfovibrio salexigens DSM 2638] gi|242121886|gb|ACS79582.1| extracellular solute-binding protein family 3 [Desulfovibrio salexigens DSM 2638] Length = 271 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 54/270 (20%), Positives = 114/270 (42%), Gaps = 13/270 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFD 60 + + + ++ + + A L ++K RG L CG+ +V F + + G D Sbjct: 1 MRRLSIIVAMVLAMALCASVAMADKLQEVKARGVLMCGVKDAVVPFGYIDEDTKKLVGLD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D C ++ + K ++ P+ + R + ID+ + + R+ ++ + Sbjct: 61 IDICNYIAKELG---VKAEFKPVTSATRIPMVVQGSIDLAAATMTHKIARDDTIDFSI-- 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + DGQ ++ K GI+SV+ L G + G+T+E + A + FE Sbjct: 116 TYFMDGQKLLVKKGAGINSVADLKGKKVGTAKGSTSEQNIM----AAQPDCKVLSFEGYP 171 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A + + A T D + L LK ++ P + I+ + IS P + + ++ + + Sbjct: 172 QAMLALKQGKVKAVTTDSTILLGLKNSDPNPEKWEIVGEFISPEPYGIGLPENESNFRDA 231 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTN 270 V+ A++ + G +K N+ T Sbjct: 232 VN---QALIKMWKSGDYKKAYNKWFGPDTK 258 >gi|260223278|emb|CBA33680.1| General L-amino acid-binding periplasmic protein aapJ [Curvibacter putative symbiont of Hydra magnipapillata] Length = 173 Score = 227 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 85/175 (48%), Positives = 118/175 (67%), Gaps = 3/175 (1%) Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK-LTNDRPSEHVILPDIISKSPLA 227 M PIVFE++E + AY + RC AYT D S L + + P++HVILP++ISK PL Sbjct: 1 MNIKPIVFEKLEAAEGAYFSGRCVAYTTDASGLASTRNKVAKNPADHVILPELISKEPLG 60 Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGE 287 P + +GD EW IV WT Y ++ AEE G+TQ N++ + +T +P V R LG + + G+ Sbjct: 61 PMVRRGDDEWTAIVKWTVYGLLEAEENGVTQANVDDLKANTKDPVVGRLLGT--TEDTGK 118 Query: 288 ALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 LGL K+W R I+ GNYGE+F+RN+G +S L++PRG N LWSKGG+ YAPP+R Sbjct: 119 LLGLDKEWLARAIKTTGNYGEIFERNVGPKSPLQLPRGLNNLWSKGGVQYAPPVR 173 >gi|222823699|ref|YP_002575273.1| amino acid ABC transporter, periplasmic solute-binding lipoprotein [Campylobacter lari RM2100] gi|222538921|gb|ACM64022.1| amino acid ABC transporter, periplasmic solute-binding lipoprotein [Campylobacter lari RM2100] Length = 275 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 66/275 (24%), Positives = 125/275 (45%), Gaps = 12/275 (4%) Query: 1 MYKDFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K F +S L + S S +N + + IK++G ++ G+ F + A G +G+ Sbjct: 1 MKKIFLLSFLMALFFGACSNSGSNENSIEKIKQQGVIRIGVFGDKPPFGYLDAQGKNQGY 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DV F + ++ + D SKIQ++ + A R LQS ++D++ N T RE+ + A Sbjct: 61 DVYFAKRIAKELLGDESKIQFVLVEAANRVEFLQSNKVDLILANFTKTPEREVVVDFAL- 119 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 G + K I ++ L ++ + GTT + YF + + I F++ Sbjct: 120 -PYMKVALGVVAPKNSDIKTIDDLKSKTLILNKGTTADA----YFTKNMPEIKTIKFDQN 174 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E AA R DA + D + L+A + P+ V++ ++ + +APA+ +GD Sbjct: 175 TETFAALIGKRGDALSHDNALLFAWAK--ENPNFEVVIKELGNHDVIAPAVKKGDEAMLK 232 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 ++ +V + K ++ K + D++ Sbjct: 233 FIN---NLIVKLQNEQFFHKAYDETLKPFFSDDIK 264 >gi|117618623|ref|YP_855303.1| glutamine/glutamate ABC transporter, periplasmic glutamine/glutamate-binding protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117560030|gb|ABK36978.1| glutamine/glutamate ABC transporter, periplasmic glutamine/glutamate-binding protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 278 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 65/279 (23%), Positives = 117/279 (41%), Gaps = 19/279 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K V L+ L S + +A+ L IK R L G+ T F V G++ G Sbjct: 1 MKKITSVLFSALLGLGLASGAAHAADGSLDKIKARDKLIVGVFTDKPPFGYVDEKGNYVG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD D R + + D +K++++ + R LQS ++D++ N T R + Sbjct: 61 FDTDLGRRFAKDLLGDENKVEFVAVEPASRIPFLQSDKVDLILANMTVTPERRQVVDF-- 118 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 ++ + + L+ ++ V GTT ++ L ++ + + FE+ Sbjct: 119 TNPNLRVAVQVLVPQGSPAKQLDDLASKTLIVTTGTTADIWLTR----NHPDWKVLKFEK 174 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII-SKSPLAPAIIQGDTEW 237 E A R DAY D L++ N + +LP+ + S+ P+APA+ +G+ E Sbjct: 175 NTESLQALAQGRGDAYAQDNLVLFSWAKENPG---YRVLPEKLGSEDPIAPAVKKGNIEL 231 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDT----TNPD 272 + W + + E K +Q +D T+P+ Sbjct: 232 RD---WVNDRLAKLGEEKYLLKLYDQYVRDKLSADTDPN 267 >gi|283853865|ref|ZP_06371081.1| extracellular solute-binding protein family 3 [Desulfovibrio sp. FW1012B] gi|283570740|gb|EFC18784.1| extracellular solute-binding protein family 3 [Desulfovibrio sp. FW1012B] Length = 272 Score = 227 bits (578), Expect = 3e-57, Method: Composition-based stats. Identities = 65/271 (23%), Positives = 112/271 (41%), Gaps = 13/271 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 M K ++S L +++ + + A L DIK RG L G+ F V GF Sbjct: 1 MRKTAWISALAGLLILGLAATALAGKLDDIKSRGALVAGVKDSQPPFGYVDEKTNQVVGF 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 ++D AL+ + K++ P+ + R L IDI++ RE + + Sbjct: 61 EIDLMEALAKRLG---VKLELKPVTSSTRIPMLGQGAIDIVAATMTHKKEREDQVDFSI- 116 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ ++ K G++SV+ L G + G+T+E + K I FE Sbjct: 117 -TYFMTGQKLLVKKGGGVNSVADLGGKKVGSVKGSTSEQNV----KKAQPDCTVISFETY 171 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A + + A T D S L +K ++D P I+ + IS P + + D+++ + Sbjct: 172 PEAFLALKQGKVQAMTTDESILVGIKNSDDNPDAWDIVGEYISPEPYGLGLPENDSDFRD 231 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 V+ A++ E G QK + Sbjct: 232 FVN---LALMNMWETGEYQKIYEKWFGKGKK 259 >gi|303246863|ref|ZP_07333140.1| extracellular solute-binding protein family 3 [Desulfovibrio fructosovorans JJ] gi|302491880|gb|EFL51760.1| extracellular solute-binding protein family 3 [Desulfovibrio fructosovorans JJ] Length = 272 Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats. Identities = 64/271 (23%), Positives = 114/271 (42%), Gaps = 13/271 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 M K ++S L ++ + + A L DIK RG L G+ F V GF Sbjct: 1 MRKIAWISTLACLLTLLAAAAATAGKLDDIKARGALVAGVKDSQPPFGYVDEKTNQIVGF 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 ++D +AL+ + K++ P+ + R L +DI++ RE + + Sbjct: 61 EIDLMQALAKRLG---VKLELKPVTSSTRIPMLGQGAVDIVAATMTHKKEREDQIDFSI- 116 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ ++ K G+ SV+ L+G + G+T+E + K I FE Sbjct: 117 -TYFMTGQKLLVKKGGGVQSVADLNGKKVASVKGSTSEQNV----KKAQPGCTVISFETY 171 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A + + A T D S L ++ ++D P + I+ D IS P + + D+++ + Sbjct: 172 PEAFLALKQGKVQAMTTDESILVGIRNSDDHPEKWEIVGDYISPEPYGFGLPENDSDFRD 231 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 V+ A++ E G QK ++ Sbjct: 232 YVN---LALMNMWETGEYQKIYDKWFGKGKK 259 >gi|219670584|ref|YP_002461019.1| extracellular solute-binding protein family 3 [Desulfitobacterium hafniense DCB-2] gi|219540844|gb|ACL22583.1| extracellular solute-binding protein family 3 [Desulfitobacterium hafniense DCB-2] Length = 297 Score = 225 bits (575), Expect = 5e-57, Method: Composition-based stats. Identities = 65/252 (25%), Positives = 115/252 (45%), Gaps = 9/252 (3%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 ++A L +IK+RG L+ G+ + F V ANG +GFDV+ R + + D SK++++ Sbjct: 45 SSAGSLEEIKQRGTLRIGVFSDKPPFGYVDANGQNQGFDVEIARRFAKDLLGDESKVEFV 104 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 + A R L+S ++DI+ N T R+ + A G + I+S+ Sbjct: 105 LVEAANRVPYLESNKVDIIMANFTVTEERKQKVDFAN--PYMKVALGIVSPNGALITSID 162 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 QL G + V GTT + DY ++ + +++ E A + R A D + + Sbjct: 163 QLQGQKVIVNKGTTAQ----DYLTKNHPDLELLKYDQNTEAFEALKDGRGAALAHDNTEV 218 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKN 260 A + P V +P + S +APA+ +GDTE N ++ + + + +K Sbjct: 219 LAWAKS--NPGFTVGVPTLGSTDTIAPAVKKGDTELLNWINQELAELAKEDFIKKAYEKT 276 Query: 261 INQVSKDTTNPD 272 + V D P+ Sbjct: 277 LLPVYGDDVKPE 288 >gi|269120152|ref|YP_003308329.1| extracellular solute-binding protein family 3 [Sebaldella termitidis ATCC 33386] gi|268614030|gb|ACZ08398.1| extracellular solute-binding protein family 3 [Sebaldella termitidis ATCC 33386] Length = 283 Score = 225 bits (575), Expect = 6e-57, Method: Composition-based stats. Identities = 64/274 (23%), Positives = 113/274 (41%), Gaps = 18/274 (6%) Query: 1 MYKDFFVSILCLIILFFTSF-------STNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M K F+S++ L++ + + + I+KRG L G+ T F + Sbjct: 1 MKKLLFLSLMVLVLFVSCGNKNTDDNNAKTSGEIEKIQKRGKLIVGVFTDKPPFGFINEK 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 + GFD+ + + + D +KI+++P+ A R LQS ++DI+ N T RE Sbjct: 61 NENDGFDIALAKQFAKDLLGDENKIEFVPVEAASRVPFLQSDKVDIIMANMTVTPDREKV 120 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + A + + K I S++ L G + V GTT ++ +F + Sbjct: 121 VDFAN--PYMKVAIQILGNDKDNIKSLNDLKGKKLIVNKGTTADI----FFTKNYPDIEL 174 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + F+ E A + R A D LYA T P ++ + SP+APA+ +G Sbjct: 175 LRFDHNTEAFQALKDGRGVALAHDSLLLYAWAQT--NPGFTIVNEKLEEPSPIAPAVKKG 232 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 + E W + + + K ++ KD Sbjct: 233 NNELRE---WINNELTELGKQNYLHKIYDEKLKD 263 >gi|225019520|ref|ZP_03708712.1| hypothetical protein CLOSTMETH_03473 [Clostridium methylpentosum DSM 5476] gi|224947741|gb|EEG28950.1| hypothetical protein CLOSTMETH_03473 [Clostridium methylpentosum DSM 5476] Length = 282 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 67/250 (26%), Positives = 114/250 (45%), Gaps = 16/250 (6%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L IK+RG ++ G+ + F + +NG+ +G+DV + L+ + D SK++++ + A Sbjct: 35 LESIKERGTIRIGVFSDKPPFGYIDSNGENQGYDVYLAKRLAKDLLGDESKVEFVLVEAA 94 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 R LQS ++D+L N T R + A Y I+ K GI+SV QL G Sbjct: 95 SRVEYLQSNKVDLLLANFTVTKERAEQVDFAN---PYMKVALGIVLKDGGITSVDQLKGK 151 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 ++ V GTT E YF + + + F++ E A + R DA D + L+A Sbjct: 152 TLAVNKGTTAET----YFTENYPDINLLKFDQNTETFQALKDGRADALAHDNTLLFAWA- 206 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV-- 264 N+ V + + S +APA+ +G+ E + W + + E KN + Sbjct: 207 -NENDGFEVGVSSLGSHDTIAPAVKKGNDELRS---WVNDELAKLGEEKFMHKNYQETLL 262 Query: 265 --SKDTTNPD 272 D +P+ Sbjct: 263 PYYGDDIDPE 272 >gi|226938961|ref|YP_002794032.1| GltI [Laribacter hongkongensis HLHK9] gi|226713885|gb|ACO73023.1| GltI [Laribacter hongkongensis HLHK9] Length = 298 Score = 224 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 49/273 (17%), Positives = 104/273 (38%), Gaps = 10/273 (3%) Query: 4 DFFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 VS L ++ + + L ++++G G + F+ + AN G+ +D Sbjct: 6 RLLVSALAASVVATPALAAELTGTLKKVQEKGEFVIGHRESSIPFSYLDANQKPVGYMMD 65 Query: 63 FCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 C +++ + + + +P+ ++ R + + +DI +T +L R+ + + Sbjct: 66 ICNRIAAEVKKEAGAKGAVTRLVPVTSQTRIPLMTNGTVDIECGSTTNSLERQKQVAFSV 125 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 P Y ++ GI S+S L G + GTT++ + + K N+ + + Sbjct: 126 TP--YITSIRMLVKADSGIKSLSDLDGKPVVTTTGTTSDRYIKQHEKGQNLNVKNVYGKD 183 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R A+ D L L + P E I+ + +S P + + D + Sbjct: 184 HADSFLMVSTGRASAFVMDDVLLAGLIANSKNPKEFSIVGETLSVEPYGVMMRKDDPQLK 243 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 +V M+ + EL K + P Sbjct: 244 AVVDRVIVGMMKSGELD---KLYTKWFMSPIPP 273 >gi|223040121|ref|ZP_03610401.1| acriflavine resistance protein [Campylobacter rectus RM3267] gi|222878598|gb|EEF13699.1| acriflavine resistance protein [Campylobacter rectus RM3267] Length = 278 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 60/280 (21%), Positives = 110/280 (39%), Gaps = 19/280 (6%) Query: 1 MYKDFFVSILCLIILFFT----SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K F + +F + L IKKRG+++ G+ + F V G Sbjct: 1 MKKLLFSFLAIFAAVFLMDQANVCAAETDALAKIKKRGYVRVGVFSDKPPFGYVDKEGKN 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +G+D+ F + ++ + D SK+++ + A R L S ++DI N T R + Sbjct: 61 QGYDIYFAKRIAKDLLGDESKVKFELVEAASRVEVLVSDKVDITLANFTKTPERTRVVDF 120 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 A G + I SV +L G + V GTT + YF ++ + + Sbjct: 121 AL--PYMKVSLGVVSPNGAVIKSVDELKGKKLIVNKGTTADA----YFTKNHPDIELVKY 174 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 ++ E AA R A D + L+A + P V + + +APA+ + + Sbjct: 175 DQNTETFAALVDKRGTALAHDNALLFAWAK--ENPGFTVGIEALGEIDVIAPAVKKRNKA 232 Query: 237 WYNIVSWTHYAMVTAEELGITQKNIN----QVSKDTTNPD 272 W + ++ + KN + + D+ +P+ Sbjct: 233 LLE---WLNNEIIELGKENFFHKNYDATLRPIYGDSVDPE 269 >gi|255321552|ref|ZP_05362710.1| acriflavine resistance protein [Campylobacter showae RM3277] gi|255301408|gb|EET80667.1| acriflavine resistance protein [Campylobacter showae RM3277] Length = 278 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 63/280 (22%), Positives = 112/280 (40%), Gaps = 19/280 (6%) Query: 1 MYKDFFVSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K F + +F T + A L IK+RG+++ G+ + F V G Sbjct: 1 MRKLLFSFLATFAAVFLTGQANLQAAEADALAKIKERGYVRVGVFSDKPPFGYVDKEGKN 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +G+D+ F + ++ + D SK+++ + A R L + ++DI N T R + Sbjct: 61 QGYDIYFAKRIAKDLLGDESKVKFELVEAAGRVEVLVADKVDITLANFTKTPERARVVDF 120 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 A G + I SV +L G + V GTT + YF ++ I + Sbjct: 121 AL--PYMKVSLGVVSPDGAVIKSVDELKGKKLIVNKGTTADA----YFTKNHPDIELIKY 174 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 ++ E AA R A D + L+A + P V + + +APA+ +G+ Sbjct: 175 DQNTETFAALVDKRGVALAHDNALLFAWAK--ENPGFTVGIEALGEVDVIAPAVKKGNKA 232 Query: 237 WYNIVSWTHYAMVTAEELGITQKNIN----QVSKDTTNPD 272 W + + + KN + + D+ NP+ Sbjct: 233 LLE---WLNNEITELGKENFFHKNYDATLKPIYGDSVNPE 269 >gi|89897433|ref|YP_520920.1| hypothetical protein DSY4687 [Desulfitobacterium hafniense Y51] gi|89336881|dbj|BAE86476.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 276 Score = 223 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 64/249 (25%), Positives = 111/249 (44%), Gaps = 9/249 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 L +IK+RG L+ G+ + F V ANG +GFDV+ R + + D SK++++ + Sbjct: 27 GSLEEIKQRGTLRIGVFSDKPPFGYVDANGQNQGFDVEIARRFAKDLLGDESKVEFVLVE 86 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 A R L+S ++DI+ N T R+ + A G + I+S+ QL Sbjct: 87 AANRVPYLESNKVDIIMANFTVTEERKQKVDFAN--PYMKVALGIVSPDGALITSIDQLQ 144 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G + V GTT + DY ++ + +++ E A + R A D + + A Sbjct: 145 GKKVIVNKGTTAQ----DYLTKNHPDLELLKYDQNTEAFEALKDGRGAALAHDNTEVLAW 200 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQ 263 + P V +P + S +APA+ +GDTE N ++ + + +K + Sbjct: 201 AKS--NPGFTVGVPALGSTDTIAPAVKKGDTELLNWINQELAELAKENFVRKAYEKTLLP 258 Query: 264 VSKDTTNPD 272 V D P+ Sbjct: 259 VYGDDVKPE 267 >gi|145589173|ref|YP_001155770.1| extracellular solute-binding protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047579|gb|ABP34206.1| amino acid ABC transporter substrate-binding protein, PAAT family [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 304 Score = 223 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 55/259 (21%), Positives = 107/259 (41%), Gaps = 8/259 (3%) Query: 2 YKDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 YK+ + + + NA+ L IK G + G+ + + + + G+ Sbjct: 3 YKNLISASVFAASFLVGAIDANAASQTLDKIKSSGAVTMGVRESSIPMSYTTGDSRFDGY 62 Query: 60 DVDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 V+ CR + I D +I Y P+ ++ R +Q+ +DI T + R +G Sbjct: 63 HVEICRMILGDIKDKLGMSTLRINYQPVTSQNRVPLVQNGTVDIECGTTTNNVNRAKDVG 122 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 A Y + + GI+S+SQL+G + GTT+ L + KA+ + + + Sbjct: 123 FA--YTLYVEEVRIAVKANSGITSISQLAGKKVATTTGTTSVQLLRKHEKANGVNFEEVY 180 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + + R DA+ D S L + P ++ I+ +++S P+A + + D Sbjct: 181 GKDHADSFLLLESGRADAFVMDGSILAGNIANSKNPKDYKIVGEVLSTEPIAIMVRKDDP 240 Query: 236 EWYNIVSWTHYAMVTAEEL 254 E+ V +V + Sbjct: 241 EFKAAVDAAITKIVANGNM 259 >gi|315928341|gb|EFV07656.1| Putative amino-acid transporter periplasmic solute-binding protein [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 279 Score = 223 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 59/279 (21%), Positives = 117/279 (41%), Gaps = 16/279 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + + + + N+ L IK+ G ++ G+ F V G+ Sbjct: 1 MKKILLSVLTAFVAVVLAACGGNSDSKTLNSLDKIKQNGVVRIGVFGDKPPFGYVDEKGN 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +G+D+ + ++ +F D +K+Q++ + A R L+S ++DI+ N T R + Sbjct: 61 NQGYDIALAKRIAKELFGDENKVQFVLVEAANRVEFLKSNKVDIILANFTQTPQR--AEQ 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F G + K I+SV L ++ + GTT + YF + + Sbjct: 119 VDFCSPYMKVALGVAVPKDSNITSVEDLKDKTLLLNKGTTADA----YFTQNYPNIKTLK 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 +++ E AA R DA + D + L+A D P + + ++ +K +APA+ +GD Sbjct: 175 YDQNTETFAALMDKRGDALSHDNTLLFAWVK--DHPDFKMGIKELGNKDVIAPAVKKGDK 232 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 E + ++ + K ++ K +V+ Sbjct: 233 ELKEFID---NLIIKLGQEQFFHKAYDETLKAHFGDEVK 268 >gi|52144760|ref|YP_082068.1| amino acid ABC transporter, periplasmic solute-binding protein [Bacillus cereus E33L] gi|51978229|gb|AAU19779.1| amino acid ABC transporter, periplasmic solute-binding protein [Bacillus cereus E33L] Length = 286 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 61/284 (21%), Positives = 111/284 (39%), Gaps = 22/284 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTN-----------ASILGDIKKRGFLKCGINTGLVGFAE 49 M K I+ L+ + + +N + + IK+RG L + T F Sbjct: 1 MKKLLTFIIIGLLSILVVACGSNEKKTEKTSAKPSGKIEQIKERGELVVAVFTDKPPFGY 60 Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 V +G GF++D + + + D SK++++P+ A R LQS ++D + N T Sbjct: 61 VDKDGKNVGFEIDMAKRFAKDLLGDESKVKFVPVEAASRIPYLQSDKVDFVLANMTATDE 120 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 R+ + ++ I SV L G + V GTT ++ L K Sbjct: 121 RKKVVDF--TNPHLKVAVQVLVKDGSPIQSVKDLEGKKVIVTKGTTADIYLTKNMK---- 174 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 I F++ E A + R DAY D L + N P H++ + +A A Sbjct: 175 NVELIKFDKNTEALQALKDGRADAYAQDNLVLLSWA--NKNPGFHLLKDKLGGDDLIAIA 232 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 + +G+ E ++ W + + + ++ K+ P + Sbjct: 233 VKKGNKEIHD---WVNKELEKLGKENFLHTLYDKHLKEEFGPQI 273 >gi|254199128|ref|ZP_04905543.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei S13] gi|254261815|ref|ZP_04952869.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 1710a] gi|169656958|gb|EDS88355.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei S13] gi|254220504|gb|EET09888.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 1710a] Length = 363 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 52/272 (19%), Positives = 100/272 (36%), Gaps = 9/272 (3%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 + + L + + L IK G + G + F+ N G+ DF Sbjct: 71 KAMLMVAALSTFAGGAIAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGYSRDF 130 Query: 64 CRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 + A+ + +++ +P+ ++ R +Q+ +DI +T L R+ Sbjct: 131 QMKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLDRQKQAAF--S 188 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G + K GI + L G ++ AGTT+E L + + M I + Sbjct: 189 DTIFVIGTRLMTKKDSGIKDFADLKGKTVVTTAGTTSERLLREMNNKNQMGMSIISAKDH 248 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E R A+ D + L + +P E VI+ S+ + + D + Sbjct: 249 GESFQTLETGRAVAFMMDDALLAGERAKAKQPGEWVIVGKPQSQEAYGCMMRKDDPAFKK 308 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 +V A+V E+ G K ++ ++ P Sbjct: 309 VVDD---AIVQVEKSGEAAKIYSKWFENPIPP 337 >gi|86150666|ref|ZP_01068887.1| surface antigen, CjaA [Campylobacter jejuni subsp. jejuni CF93-6] gi|88596418|ref|ZP_01099655.1| CjaA protein [Campylobacter jejuni subsp. jejuni 84-25] gi|218562598|ref|YP_002344377.1| putative amino-acid transporter periplasmic solute-binding protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|85838847|gb|EAQ56115.1| surface antigen, CjaA [Campylobacter jejuni subsp. jejuni CF93-6] gi|88191259|gb|EAQ95231.1| CjaA protein [Campylobacter jejuni subsp. jejuni 84-25] gi|112360304|emb|CAL35100.1| putative amino-acid transporter periplasmic solute-binding protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|315930170|gb|EFV09291.1| Putative amino-acid transporter periplasmic solute-binding protein [Campylobacter jejuni subsp. jejuni 305] Length = 279 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 60/279 (21%), Positives = 117/279 (41%), Gaps = 16/279 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + + + + N+ L IK+ G ++ G+ F V G+ Sbjct: 1 MKKILLSVLTAFVAVVLAACGGNSDSKTLNSLDKIKQNGVVRIGVFGDKPPFGYVDEKGN 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +G+D+ + ++ +F D +K+Q++ + A R L+S ++DI+ N T R + Sbjct: 61 NQGYDIALAKRIAKELFGDENKVQFVLVEAANRVEFLKSNKVDIILANFTQTPQR--AEQ 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F G + K I+SV L ++ + GTT + YF + + Sbjct: 119 VDFCSPYMKVALGVAVPKDSNITSVEDLKDKTLLLNKGTTADA----YFTQNYPNIKTLK 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 +++ E AA R DA + D + L+A D P + + ++ +K +APA+ +GD Sbjct: 175 YDQNTETFAALMDKRGDALSHDNTLLFAWVK--DHPDFKMGIKELGNKDVIAPAVKKGDK 232 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 E + ++ + K ++ K DV+ Sbjct: 233 ELKEFID---NLIIKLGQEQFFHKAYDETLKAHFGDDVK 268 >gi|83718416|ref|YP_441772.1| glutamate/aspartate ABC transporter periplasmic glutamate/aspartate-binding protein [Burkholderia thailandensis E264] gi|83652241|gb|ABC36304.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia thailandensis E264] Length = 298 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 53/277 (19%), Positives = 101/277 (36%), Gaps = 11/277 (3%) Query: 1 MYK--DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K + + L + + L IK G + G + F+ N G Sbjct: 1 MMKFPKAMLMVAALSTFAGGAIAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVG 60 Query: 59 FDVDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + DF + A+ + +++ +P+ ++ R +Q+ +DI +T L R+ Sbjct: 61 YSRDFQMKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLDRQKQA 120 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + G + K GI + L G ++ AGTT+E L + + M I Sbjct: 121 AF--SDTIFVIGTRLMTKKDSGIKDFADLKGKTVVTTAGTTSERLLREMNNKNQMGMSII 178 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + E R A+ D + L + +P E VI+ S+ + + D Sbjct: 179 SAKDHGESFQTLETGRAVAFMMDDALLAGERAKAKQPGEWVIVGKPQSQEAYGCMMRKDD 238 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + +V A+ E+ G K ++ ++ P Sbjct: 239 PAFKKVVDD---AIAQVEKSGEAAKIYSKWFENPIPP 272 >gi|126439062|ref|YP_001060407.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 668] gi|126452231|ref|YP_001067668.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 1106a] gi|134280250|ref|ZP_01766961.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 305] gi|217420638|ref|ZP_03452143.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 576] gi|226196796|ref|ZP_03792375.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei Pakistan 9] gi|237813798|ref|YP_002898249.1| glutamate/aspartate periplasmic-binding protein [Burkholderia pseudomallei MSHR346] gi|242316081|ref|ZP_04815097.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 1106b] gi|254180661|ref|ZP_04887259.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 1655] gi|254299254|ref|ZP_04966704.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 406e] gi|126218555|gb|ABN82061.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 668] gi|126225873|gb|ABN89413.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 1106a] gi|134248257|gb|EBA48340.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 305] gi|157809157|gb|EDO86327.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 406e] gi|184211200|gb|EDU08243.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 1655] gi|217396050|gb|EEC36067.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 576] gi|225931056|gb|EEH27064.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei Pakistan 9] gi|237504398|gb|ACQ96716.1| glutamate/aspartate periplasmic-binding protein [Burkholderia pseudomallei MSHR346] gi|242139320|gb|EES25722.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 1106b] Length = 328 Score = 223 bits (568), Expect = 4e-56, Method: Composition-based stats. Identities = 52/272 (19%), Positives = 100/272 (36%), Gaps = 9/272 (3%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 + + L + + L IK G + G + F+ N G+ DF Sbjct: 36 KAMLMVAALSTFAGGAIAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGYSRDF 95 Query: 64 CRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 + A+ + +++ +P+ ++ R +Q+ +DI +T L R+ Sbjct: 96 QMKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLDRQKQAAF--S 153 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G + K GI + L G ++ AGTT+E L + + M I + Sbjct: 154 DTIFVIGTRLMTKKDSGIKDFADLKGKTVVTTAGTTSERLLREMNNKNQMGMSIISAKDH 213 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E R A+ D + L + +P E VI+ S+ + + D + Sbjct: 214 GESFQTLETGRAVAFMMDDALLAGERAKAKQPGEWVIVGKPQSQEAYGCMMRKDDPAFKK 273 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 +V A+V E+ G K ++ ++ P Sbjct: 274 VVDD---AIVQVEKSGEAAKIYSKWFENPIPP 302 >gi|57506052|ref|ZP_00371975.1| glutamine ABC transporter, periplasmic glutamine-binding protein (glnH) [Campylobacter upsaliensis RM3195] gi|57015660|gb|EAL52451.1| glutamine ABC transporter, periplasmic glutamine-binding protein (glnH) [Campylobacter upsaliensis RM3195] Length = 277 Score = 222 bits (567), Expect = 4e-56, Method: Composition-based stats. Identities = 61/277 (22%), Positives = 117/277 (42%), Gaps = 14/277 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS---ILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K + +F T+ ++ S + IK G +K G+ F V G + Sbjct: 1 MKKILLSIFTAFVAVFLTACGSSESGVNSIERIKNAGVVKIGVFGDKPPFGYVDEKGTNQ 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G+D+ F + ++ + D +K++++ + A R L+S ++DI+ N T R + A Sbjct: 61 GYDIIFAKRIAKELLGDENKVEFVLVEAANRVEFLKSNKVDIILANFTQTPERAEQVDFA 120 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 G + K I SV L ++ + GTT + YF ++ + F+ Sbjct: 121 L--PYMKVALGVAVPKDSEIKSVEDLKDKTLILNKGTTADA----YFTKNHADIKTLKFD 174 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + E AA R DA D + L+A +RP V++ ++ ++ +APA+ +GD E Sbjct: 175 QNTETFAALMDKRGDALAHDNTLLFAWVK--ERPDYKVVIKELGNQDVIAPAVKKGDKEL 232 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 + +++ K ++ K D++ Sbjct: 233 KEFID---NLIISLAAEQFFHKAYDESLKAHFGADIK 266 >gi|322421250|ref|YP_004200473.1| family 3 extracellular solute-binding protein [Geobacter sp. M18] gi|320127637|gb|ADW15197.1| extracellular solute-binding protein family 3 [Geobacter sp. M18] Length = 271 Score = 222 bits (567), Expect = 4e-56, Method: Composition-based stats. Identities = 56/276 (20%), Positives = 103/276 (37%), Gaps = 14/276 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59 M K + ++ + L D+KK+G L G+ L F V + G+ Sbjct: 1 MKKLMTLFAAMALVGIMAHAALAGDTLADVKKKGVLVAGVKDSLPPFGYVDEKSREIVGY 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+DF + ++ + K++ P+ + R L IDI++ R + + Sbjct: 61 DIDFVKYIAKKLG---VKVELKPVTSASRMPQLMEGNIDIIAATMTKNPERAKQIDFSH- 116 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ FI K + S+ L G I G+T+E +A + F+ Sbjct: 117 -TYFLTGQKFITKKGA-VKSLKDLEGKKIGTAKGSTSEQNVAKAIPTA----TVLSFDDY 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + A + + A T D S L + ++ I IS+ P + + D + Sbjct: 171 PQAFLALQQGKVAAVTTDESILAGILGKAPNKNKFEIPNLQISEEPYGLGMRKDDKNFVA 230 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 V+ T + E+ G +K + T ++R Sbjct: 231 FVNKTL---LEMEKNGEAKKIFEKWFGPKTTTPLKR 263 >gi|86152552|ref|ZP_01070757.1| surface antigen, CjaA [Campylobacter jejuni subsp. jejuni HB93-13] gi|85843437|gb|EAQ60647.1| surface antigen, CjaA [Campylobacter jejuni subsp. jejuni HB93-13] Length = 279 Score = 222 bits (567), Expect = 4e-56, Method: Composition-based stats. Identities = 60/279 (21%), Positives = 117/279 (41%), Gaps = 16/279 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + + + + N+ L IK+ G ++ G+ F V G+ Sbjct: 1 MKKILLSVLTTFVAVVLAACGGNSDSKTLNSLDKIKQNGVVRIGVFGDKPPFGYVDEKGN 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +G+D+ + ++ +F D +K+Q++ + A R L+S ++DI+ N T R + Sbjct: 61 NQGYDIALAKRIAKELFGDENKVQFVLVEAANRVEFLKSNKVDIILANFTQTPER--AEQ 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F G + K I+SV L ++ + GTT + YF + + Sbjct: 119 VDFCLPYMKVALGVAVPKDSNITSVEDLKDKTLLLNKGTTADA----YFTQNYPNIKTLK 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 +++ E AA R DA + D + L+A D P + + ++ +K +APA+ +GD Sbjct: 175 YDQNTETFAALMDKRGDALSHDNTLLFAWVK--DHPDFKMGIKELGNKDVIAPAVKKGDK 232 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 E + ++ + K ++ K DV+ Sbjct: 233 ELKEFID---NLIIKLGQEQFFHKAYDETLKAHFGDDVK 268 >gi|167904262|ref|ZP_02491467.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei NCTC 13177] Length = 300 Score = 222 bits (567), Expect = 5e-56, Method: Composition-based stats. Identities = 52/272 (19%), Positives = 100/272 (36%), Gaps = 9/272 (3%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 + + L + + L IK G + G + F+ N G+ DF Sbjct: 8 KAMLMVAALSTFAGGAIAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGYSRDF 67 Query: 64 CRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 + A+ + +++ +P+ ++ R +Q+ +DI +T L R+ Sbjct: 68 QMKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLDRQKQAAF--S 125 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G + K GI + L G ++ AGTT+E L + + M I + Sbjct: 126 DTIFVIGTRLMTKKDSGIKDFADLKGKTVVTTAGTTSERLLREMNNKNQMGMSIISAKDH 185 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E R A+ D + L + +P E VI+ S+ + + D + Sbjct: 186 GESFQTLETGRAVAFMMDDALLAGERAKAKQPGEWVIIGKPQSQEAYGCMMRKDDPAFKK 245 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 +V A+V E+ G K ++ ++ P Sbjct: 246 VVDD---AIVQVEKSGEAAKIYSKWFENPIPP 274 >gi|157415241|ref|YP_001482497.1| surface antigen, CjaA [Campylobacter jejuni subsp. jejuni 81116] gi|283956380|ref|ZP_06373860.1| surface antigen, CjaA [Campylobacter jejuni subsp. jejuni 1336] gi|157386205|gb|ABV52520.1| surface antigen, CjaA [Campylobacter jejuni subsp. jejuni 81116] gi|283792100|gb|EFC30889.1| surface antigen, CjaA [Campylobacter jejuni subsp. jejuni 1336] gi|307747883|gb|ADN91153.1| Surface antigen, CjaA [Campylobacter jejuni subsp. jejuni M1] gi|315932110|gb|EFV11053.1| surface antigen, CjaA [Campylobacter jejuni subsp. jejuni 327] Length = 279 Score = 222 bits (567), Expect = 5e-56, Method: Composition-based stats. Identities = 60/279 (21%), Positives = 118/279 (42%), Gaps = 16/279 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + +++ + N+ L IK+ G ++ G+ F V G+ Sbjct: 1 MKKILLSVLTAFVVVVLAACGGNSDSKTLNSLDKIKQNGVIRIGVFGDKPPFGYVDEKGN 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +G+D+ + ++ +F D +K+Q++ + A R L+S ++DI+ N T R + Sbjct: 61 NQGYDIALAKRIAKELFGDENKVQFVLVEAANRVEFLKSNKVDIILANFTQTPQR--AEQ 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F G + K I+SV L ++ + GTT + YF + + Sbjct: 119 VDFCLPYMKVALGVAVPKDSNITSVEDLKDKTLLLNKGTTADA----YFTQNYPDIKTLK 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 +++ E AA R DA + D + L+A D P + + ++ +K +APA+ +GD Sbjct: 175 YDQNTETFAALMDKRGDALSHDNTLLFAWVK--DHPDFKMAIKELGNKDVIAPAVKKGDK 232 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 E + ++ + K ++ K DV+ Sbjct: 233 ELKEFID---NLIIKLGQEQFFHKAYDETLKAHFGDDVK 268 >gi|145297676|ref|YP_001140517.1| ABC-type glutamine/glutamate transporter, periplasmic binding protein [Aeromonas salmonicida subsp. salmonicida A449] gi|142850448|gb|ABO88769.1| ABC-type glutamine/glutamate transporter, periplasmic binding protein [Aeromonas salmonicida subsp. salmonicida A449] Length = 278 Score = 222 bits (567), Expect = 5e-56, Method: Composition-based stats. Identities = 65/279 (23%), Positives = 115/279 (41%), Gaps = 19/279 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K V LI L S + A+ L IK R L G+ T F V G + G Sbjct: 1 MKKITSVLFSALIGLGLASGAAQAADGSLDKIKARDKLIVGVFTDKPPFGYVDEKGSYVG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD D R + + D +K++++ + R LQS ++D++ N T R + Sbjct: 61 FDTDLGRRFAKDLLGDENKVEFVAVEPASRIPFLQSDKVDLILANMTVTPERREVVDF-- 118 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 ++ + + L+ ++ V GTT ++ L ++ + + FE+ Sbjct: 119 TNPNLRVAVQVLVPEGSPAKGLGDLADKTLIVTTGTTADIWLTR----NHPDWKVLKFEK 174 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII-SKSPLAPAIIQGDTEW 237 E A R DAY D L++ N + +LP+ + ++ P+APA+ +G+ E Sbjct: 175 NTESLQALAQGRGDAYAQDNLVLFSWAKENPG---YRVLPEKLGAEDPIAPAVKKGNIEL 231 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDT----TNPD 272 + W + + E K +Q +D T+P+ Sbjct: 232 RD---WVNERLAKLGEEKYLLKLYDQYVRDKLSADTDPN 267 >gi|86151024|ref|ZP_01069240.1| bacterial extracellular solute-binding proteins, family 3 [Campylobacter jejuni subsp. jejuni 260.94] gi|148926105|ref|ZP_01809791.1| putative amino-acid transporter periplasmic solute-binding protein [Campylobacter jejuni subsp. jejuni CG8486] gi|85842194|gb|EAQ59440.1| bacterial extracellular solute-binding proteins, family 3 [Campylobacter jejuni subsp. jejuni 260.94] gi|145845584|gb|EDK22676.1| putative amino-acid transporter periplasmic solute-binding protein [Campylobacter jejuni subsp. jejuni CG8486] gi|284926212|gb|ADC28564.1| putative amino-acid transporter periplasmic solute-binding protein [Campylobacter jejuni subsp. jejuni IA3902] Length = 279 Score = 222 bits (567), Expect = 5e-56, Method: Composition-based stats. Identities = 60/279 (21%), Positives = 117/279 (41%), Gaps = 16/279 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + + + + N+ L IK+ G ++ G+ F V G+ Sbjct: 1 MKKILLSVLTAFVAVVLAACGGNSDSKTLNSLDKIKQNGVVRIGVFGDKPPFGYVDEKGN 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +G+D+ + ++ +F D +K+Q++ + A R L+S ++DI+ N T R + Sbjct: 61 NQGYDIALAKRIAKELFGDENKVQFVLVEAANRVEFLKSNKVDIILANFTQTPQR--AEQ 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F G + K I+SV L ++ + GTT + YF + + Sbjct: 119 VDFCLPYMKVALGVAVPKDSNITSVEDLKDKTLLLNKGTTADA----YFTQNYPNIKTLK 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 +++ E AA R DA + D + L+A D P + + ++ +K +APA+ +GD Sbjct: 175 YDQNTETFAALMDKRGDALSHDNTLLFAWVK--DHPDFKMGIKELGNKDVIAPAVKKGDK 232 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 E + ++ + K ++ K DV+ Sbjct: 233 ELKEFID---NLIIKLGQEQFFHKAYDETLKAHFGDDVK 268 >gi|295400877|ref|ZP_06810853.1| extracellular solute-binding protein family 3 [Geobacillus thermoglucosidasius C56-YS93] gi|294977140|gb|EFG52742.1| extracellular solute-binding protein family 3 [Geobacillus thermoglucosidasius C56-YS93] Length = 284 Score = 222 bits (566), Expect = 6e-56, Method: Composition-based stats. Identities = 60/249 (24%), Positives = 109/249 (43%), Gaps = 12/249 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDD 74 T S+ + L IKKRG L G+ L F G+ +GFD+D + L+ I D Sbjct: 39 GSTKTSSETNTLEKIKKRGKLVVGVKYDLNLFGLKNPETGEVEGFDIDIAKGLAKKILGD 98 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 +KI+ + +K R L + +ID + T R+ + + + GQ ++ K Sbjct: 99 ENKIELKEVTSKTRIPMLNNGEIDAIIATMTITEERKKEVDF--SDVYFMAGQSLLVKKD 156 Query: 135 KGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 I+SV L G ++ G+T+ + + + + + FE E A +A + DA Sbjct: 157 SKINSVKDLKKGMTVLTAKGSTSAQNI----RKAAPQVNVLEFENYAEAFTALKAGQGDA 212 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 T D + L + + + +L + ++ P A+ +GDTE+ +++ + E Sbjct: 213 LTTDNALLLGMAKQDPN---YRVLDETFTEEPYGIAVRKGDTEFLQVINEYLKEIKENGE 269 Query: 254 L-GITQKNI 261 I +K I Sbjct: 270 YDKIYEKWI 278 >gi|76808998|ref|YP_334805.1| glutamate/aspartate periplasmic binding protein [Burkholderia pseudomallei 1710b] gi|167721209|ref|ZP_02404445.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei DM98] gi|167740181|ref|ZP_02412955.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 14] gi|167817396|ref|ZP_02449076.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 91] gi|167825802|ref|ZP_02457273.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 9] gi|167895874|ref|ZP_02483276.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 7894] gi|167912523|ref|ZP_02499614.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 112] gi|167920474|ref|ZP_02507565.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei BCC215] gi|254190906|ref|ZP_04897412.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei Pasteur 52237] gi|76578451|gb|ABA47926.1| glutamate/aspartate periplasmic binding protein precursor [Burkholderia pseudomallei 1710b] gi|157938580|gb|EDO94250.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei Pasteur 52237] Length = 297 Score = 222 bits (566), Expect = 6e-56, Method: Composition-based stats. Identities = 52/272 (19%), Positives = 100/272 (36%), Gaps = 9/272 (3%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 + + L + + L IK G + G + F+ N G+ DF Sbjct: 5 KAMLMVAALSTFAGGAIAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGYSRDF 64 Query: 64 CRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 + A+ + +++ +P+ ++ R +Q+ +DI +T L R+ Sbjct: 65 QMKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLDRQKQAAF--S 122 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G + K GI + L G ++ AGTT+E L + + M I + Sbjct: 123 DTIFVIGTRLMTKKDSGIKDFADLKGKTVVTTAGTTSERLLREMNNKNQMGMSIISAKDH 182 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E R A+ D + L + +P E VI+ S+ + + D + Sbjct: 183 GESFQTLETGRAVAFMMDDALLAGERAKAKQPGEWVIVGKPQSQEAYGCMMRKDDPAFKK 242 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 +V A+V E+ G K ++ ++ P Sbjct: 243 VVDD---AIVQVEKSGEAAKIYSKWFENPIPP 271 >gi|53720532|ref|YP_109518.1| glutamate/aspartate periplasmic binding protein precursor [Burkholderia pseudomallei K96243] gi|52210946|emb|CAH36934.1| glutamate/aspartate periplasmic binding protein precursor [Burkholderia pseudomallei K96243] Length = 300 Score = 222 bits (566), Expect = 6e-56, Method: Composition-based stats. Identities = 52/272 (19%), Positives = 100/272 (36%), Gaps = 9/272 (3%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 + + L + + L IK G + G + F+ N G+ DF Sbjct: 8 KAMLMVAALSTFAGGAIAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGYSRDF 67 Query: 64 CRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 + A+ + +++ +P+ ++ R +Q+ +DI +T L R+ Sbjct: 68 QMKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLDRQKQAAF--S 125 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G + K GI + L G ++ AGTT+E L + + M I + Sbjct: 126 DTIFVIGTRLMTKKDSGIKDFADLKGKTVVTTAGTTSERLLREMNNKNQMGMSIISAKDH 185 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E R A+ D + L + +P E VI+ S+ + + D + Sbjct: 186 GESFQTLETGRAVAFMMDDALLAGERAKAKQPGEWVIVGKPQSQEAYGCMMRKDDPAFKK 245 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 +V A+V E+ G K ++ ++ P Sbjct: 246 VVDD---AIVQVEKSGEAAKIYSKWFENPIPP 274 >gi|57237809|ref|YP_179057.1| surface antigen, CjaA [Campylobacter jejuni RM1221] gi|205356696|ref|ZP_03223457.1| putative amino-acid transporter periplasmic solute binding protein [Campylobacter jejuni subsp. jejuni CG8421] gi|57166613|gb|AAW35392.1| surface antigen, CjaA [Campylobacter jejuni RM1221] gi|205345434|gb|EDZ32076.1| putative amino-acid transporter periplasmic solute binding protein [Campylobacter jejuni subsp. jejuni CG8421] gi|315058426|gb|ADT72755.1| Putative amino-acid transporter periplasmic solute-binding protein [Campylobacter jejuni subsp. jejuni S3] Length = 279 Score = 222 bits (566), Expect = 6e-56, Method: Composition-based stats. Identities = 60/279 (21%), Positives = 117/279 (41%), Gaps = 16/279 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + + + + N+ L IK+ G ++ G+ F V G+ Sbjct: 1 MKKILLSVLTTFVAVVLAACGGNSDSKTLNSLDKIKQNGVVRIGVFGDKPPFGYVDEKGN 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +G+D+ + ++ +F D +K+Q++ + A R L+S ++DI+ N T R + Sbjct: 61 NQGYDIALAKRIAKELFGDENKVQFVLVEAANRVEFLKSNKVDIILANFTQTPQR--AEQ 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F G + K I+SV L ++ + GTT + YF + + Sbjct: 119 VDFCLPYMKVALGVAVPKDSNITSVEDLKDKTLLLNKGTTADA----YFTQNYPNIKTLK 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 +++ E AA R DA + D + L+A D P + + ++ +K +APA+ +GD Sbjct: 175 YDQNTETFAALMDKRGDALSHDNTLLFAWVK--DHPDFKMGIKELGNKDVIAPAVKKGDK 232 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 E + ++ + K ++ K DV+ Sbjct: 233 ELKEFID---NLIIKLGQEQFFHKAYDETLKAHFGDDVK 268 >gi|121611643|ref|YP_999450.1| extracellular solute-binding protein [Verminephrobacter eiseniae EF01-2] gi|121556283|gb|ABM60432.1| extracellular solute-binding protein, family 3 [Verminephrobacter eiseniae EF01-2] Length = 296 Score = 222 bits (566), Expect = 7e-56, Method: Composition-based stats. Identities = 46/268 (17%), Positives = 102/268 (38%), Gaps = 7/268 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + ++ + +LF + + A L I + G + V F+ + GF Sbjct: 1 MKRSVLMASMAAAVLFSATGAQAADTLAKIAESGKITLAYRESSVPFSYLDGANKPIGFS 60 Query: 61 VDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 V+ A+ A+ +K + +P+ ++ R L + +D+ +T R + Sbjct: 61 VELSNAVVEAVKKKLNKPNLQVALMPVTSQNRIPLLTNGTVDLECGSTTNNSARGKDVAF 120 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 A ++ G + K I + L+ ++ GTT + Y N+ ++ Sbjct: 121 AVN--HFYTGTRLLAKKSSKIKDYADLAKKTVASTTGTTNAQVMRKYNADKNLGMDIVLG 178 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + + R A+ D L+ L + P+++ ++ + + P A + + D Sbjct: 179 KDHADAFLLVESDRVVAFAMDDILLFGLIANSKNPADYEVVGESLQVEPYACMLPKDDPA 238 Query: 237 WYNIVSWTHYAMVTAEE-LGITQKNINQ 263 + +V T M+ + E + K Q Sbjct: 239 FKKLVDDTFIDMMKSGEFEKLYAKWFMQ 266 >gi|46580747|ref|YP_011555.1| amino acid ABC transporter periplasmic amino acid-binding protein [Desulfovibrio vulgaris str. Hildenborough] gi|120601965|ref|YP_966365.1| extracellular solute-binding protein [Desulfovibrio vulgaris DP4] gi|46450167|gb|AAS96815.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Desulfovibrio vulgaris str. Hildenborough] gi|120562194|gb|ABM27938.1| amino acid ABC transporter substrate-binding protein, PAAT family [Desulfovibrio vulgaris DP4] gi|311234461|gb|ADP87315.1| extracellular solute-binding protein family 3 [Desulfovibrio vulgaris RCH1] Length = 270 Score = 222 bits (565), Expect = 7e-56, Method: Composition-based stats. Identities = 57/254 (22%), Positives = 109/254 (42%), Gaps = 13/254 (5%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPS 76 T+ +A L +IK+RG L CG+ +V F + GFDVD C+ ++ Sbjct: 16 TAAVAHAGKLDEIKQRGTLVCGVKDSVVPFGFIDETSKQLVGFDVDICQFIADRAG---V 72 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 K++ + + R L +D+++ R+ + + + GQ ++ K G Sbjct: 73 KLEVKTVTSATRIPMLTQGSVDLVAATMTHKFERDDVIDFSI--TYFDAGQRLLVKKGGG 130 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 I S + L G + G+T+E + KA + F+ + A + + +A T Sbjct: 131 IKSAADLKGKKVATVKGSTSEKNM----KAAQPDCVVVSFDEYPQAFLALKQGKAEAVTT 186 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 D L LK ++ P + I+ D I+ P +++ D+++ + V+ + M T G Sbjct: 187 DEPILVGLKNSDPEPDKWDIVGDFIASEPYGLGLVENDSKFRDFVNKSLAEMWTT---GA 243 Query: 257 TQKNINQVSKDTTN 270 QK+ ++ T Sbjct: 244 YQKSYDKWFGKDTK 257 >gi|153951094|ref|YP_001397935.1| CjaA protein [Campylobacter jejuni subsp. doylei 269.97] gi|152938540|gb|ABS43281.1| CjaA protein [Campylobacter jejuni subsp. doylei 269.97] Length = 279 Score = 222 bits (565), Expect = 7e-56, Method: Composition-based stats. Identities = 60/279 (21%), Positives = 117/279 (41%), Gaps = 16/279 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + + + + N+ L IK+ G ++ G+ F V G+ Sbjct: 1 MKKILLSVLTAFVAVVLAACGGNSDSKTLNSLDKIKQNGVVRIGVFGDKPPFGYVDEKGN 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +G+D+ + ++ +F D +K+Q++ + A R L+S ++DI+ N T R + Sbjct: 61 NQGYDIVLAKRIAKELFGDENKVQFVLVEAANRVEFLKSNKVDIILANFTETPQR--AEQ 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F G + K I+SV L ++ + GTT + YF + + Sbjct: 119 VDFCLPYMKVALGVAVPKDSNITSVEDLKDKTLLLNKGTTADA----YFTQNYPDIKTLK 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 +++ E AA R DA + D + L+A D P + + ++ +K +APA+ +GD Sbjct: 175 YDQNTETFAALMDKRGDALSHDNTLLFAWVK--DHPDFKMGIKELGNKDVIAPAVKKGDK 232 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 E + ++ + K ++ K DV+ Sbjct: 233 ELKEFID---NLIIKLGQEQFFHKAYDETLKAHFGDDVK 268 >gi|302876277|ref|YP_003844910.1| extracellular solute-binding protein family 3 [Clostridium cellulovorans 743B] gi|307687009|ref|ZP_07629455.1| extracellular solute-binding protein family 3 [Clostridium cellulovorans 743B] gi|302579134|gb|ADL53146.1| extracellular solute-binding protein family 3 [Clostridium cellulovorans 743B] Length = 282 Score = 222 bits (565), Expect = 8e-56, Method: Composition-based stats. Identities = 64/283 (22%), Positives = 117/283 (41%), Gaps = 22/283 (7%) Query: 1 MYKDFFVS-------ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M K F V+ I ++ +S ++ S + IKK G +K G+ + F V Sbjct: 1 MKKRFKVASILTTLVIAIGVLAGCSSKTSKESSIETIKKNGVIKIGVFSDKPPFGYVDEK 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ +GFDV R + + D SK+Q++ + A R L++ ++D++ N T R+ Sbjct: 61 GNNQGFDVYIARRFAKDLLGDESKVQFVLVEAASRVEYLETGKVDVILANFTVTDERKEK 120 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + A G + + I++V QL G + V GTT E YF + Sbjct: 121 VDFAN--PYMKVALGVVSPEGDKITNVDQLKGKKLIVNKGTTAET----YFTKNYPNIEL 174 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + +++ E A + R A D + L+A + + + S +APA+ +G Sbjct: 175 LKYDQNTEAFQALKDGRGSALAHDNTLLFAWA--RENKGFTTGVESLGSLDTIAPAVQKG 232 Query: 234 DTEWYNIVSWTHYAMVTAEELGI----TQKNINQVSKDTTNPD 272 + E +W + + E K + D+ +P+ Sbjct: 233 NVELL---NWINDELTKLGEEKFIHEAYDKTLQPAYGDSIDPE 272 >gi|283954532|ref|ZP_06372051.1| CjaA protein [Campylobacter jejuni subsp. jejuni 414] gi|283793936|gb|EFC32686.1| CjaA protein [Campylobacter jejuni subsp. jejuni 414] Length = 279 Score = 222 bits (565), Expect = 9e-56, Method: Composition-based stats. Identities = 63/279 (22%), Positives = 118/279 (42%), Gaps = 16/279 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + + + + N+ L +IK+ G ++ G+ F V G+ Sbjct: 1 MKKILLSVLTAFVAVVLAACEGNSDSKTLNSLDEIKQNGVVRIGVFGDKPPFGYVDEKGN 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +G+DV + ++ +F D +K+Q++ + A R L+S ++DI+ N T R + Sbjct: 61 NQGYDVVLAKRIAKELFGDENKVQFVLVEAANRVEFLKSNKVDIILANFTQTPQR--AEQ 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F G + K I+SV L + + GTT + YF + + Sbjct: 119 VDFCLPYMKVALGVAVPKDSNITSVEDLKDKILLLNKGTTADA----YFTQNYPNIKTLK 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 +++ E AA R DA + D + L+A D P + + ++ +K +APA+ +GD Sbjct: 175 YDQNTETFAALMDKRGDALSHDNTLLFAWIK--DHPDFKMGIKELGNKDVIAPAVKKGDK 232 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 E + ++ + K N+ KD DV+ Sbjct: 233 ELKEFID---NLIIKLGQEQFFHKAYNETLKDHFGDDVK 268 >gi|324324589|gb|ADY19849.1| amino acid ABC transporter, periplasmic solute-binding protein [Bacillus thuringiensis serovar finitimus YBT-020] Length = 286 Score = 222 bits (565), Expect = 9e-56, Method: Composition-based stats. Identities = 64/284 (22%), Positives = 109/284 (38%), Gaps = 22/284 (7%) Query: 1 MYKDF-FVSILCLIILFFTSFSTNASI----------LGDIKKRGFLKCGINTGLVGFAE 49 M K F+ I L IL S + IK+RG L + T F Sbjct: 1 MKKLLTFIMIGLLSILVVACGSNEKKTEKTSAKPSGKIEQIKERGELVVAVFTDKPPFGY 60 Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 V +G GF++D + + + D SK++++P+ A R LQS ++D + N T Sbjct: 61 VDKDGKNVGFEIDMAKRFAKDLLGDESKVKFVPVEAASRIPYLQSDKVDFVLANMTATDE 120 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 R+ + ++ I SV L G + V GTT ++ L K Sbjct: 121 RKKVVDF--TNPHLKVAVQVLVKDGSPIQSVKDLEGKKVIVTKGTTADIYLTKNMK---- 174 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 I F++ E A + R DAY D L + N P H++ + +A A Sbjct: 175 NVELIKFDKNTEALQALKDGRADAYAQDNLVLLSWA--NKNPGFHLLKDKLGGDDLIAIA 232 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 + +G+ E ++ W + + + ++ K+ P + Sbjct: 233 VKKGNKEVHD---WVNKELEKLGKENFLHTLYDKHLKEEFGPQI 273 >gi|312111273|ref|YP_003989589.1| extracellular solute-binding protein family 3 [Geobacillus sp. Y4.1MC1] gi|311216374|gb|ADP74978.1| extracellular solute-binding protein family 3 [Geobacillus sp. Y4.1MC1] Length = 284 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 60/249 (24%), Positives = 109/249 (43%), Gaps = 12/249 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDD 74 T S+ + L IKKRG L G+ L F G+ +GFD+D + L+ I D Sbjct: 39 GSTKTSSETNTLEKIKKRGKLVVGVKYDLNLFGLKNPETGEVEGFDIDIAKGLAKKILGD 98 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 +KI+ + +K R L + +ID + T R+ + + + GQ ++ K Sbjct: 99 ENKIELKEVTSKTRIPMLNNGEIDAIIATMTITEERKKEVDF--SDVYFMAGQSLLVKKD 156 Query: 135 KGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 I+SV L G ++ G+T+ + + + + + FE E A +A + DA Sbjct: 157 SKINSVKDLKKGMTVLTAKGSTSAQNI----RKAAPQVNVLEFENYAEAFTALKAGQGDA 212 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 T D + L + + + +L + ++ P A+ +GDTE+ +++ + E Sbjct: 213 LTTDNALLLGMAKQDPN---YRVLDETFTEEPYGIAVRKGDTEFLQVINEYLKEIKENGE 269 Query: 254 L-GITQKNI 261 I +K I Sbjct: 270 YDKIYEKWI 278 >gi|167580590|ref|ZP_02373464.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia thailandensis TXDOH] gi|167618697|ref|ZP_02387328.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia thailandensis Bt4] gi|257137940|ref|ZP_05586202.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia thailandensis E264] Length = 297 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 51/272 (18%), Positives = 99/272 (36%), Gaps = 9/272 (3%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 + + L + + L IK G + G + F+ N G+ DF Sbjct: 5 KAMLMVAALSTFAGGAIAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGYSRDF 64 Query: 64 CRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 + A+ + +++ +P+ ++ R +Q+ +DI +T L R+ Sbjct: 65 QMKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLDRQKQAAF--S 122 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G + K GI + L G ++ AGTT+E L + + M I + Sbjct: 123 DTIFVIGTRLMTKKDSGIKDFADLKGKTVVTTAGTTSERLLREMNNKNQMGMSIISAKDH 182 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E R A+ D + L + +P E VI+ S+ + + D + Sbjct: 183 GESFQTLETGRAVAFMMDDALLAGERAKAKQPGEWVIVGKPQSQEAYGCMMRKDDPAFKK 242 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 +V A+ E+ G K ++ ++ P Sbjct: 243 VVDD---AIAQVEKSGEAAKIYSKWFENPIPP 271 >gi|121612178|ref|YP_001000662.1| CjaA protein [Campylobacter jejuni subsp. jejuni 81-176] gi|167005588|ref|ZP_02271346.1| CjaA protein [Campylobacter jejuni subsp. jejuni 81-176] gi|71532927|emb|CAJ20048.1| glutamine-binding protein [Campylobacter jejuni subsp. jejuni 81-176] gi|87249126|gb|EAQ72087.1| CjaA protein [Campylobacter jejuni subsp. jejuni 81-176] Length = 279 Score = 221 bits (563), Expect = 2e-55, Method: Composition-based stats. Identities = 60/279 (21%), Positives = 116/279 (41%), Gaps = 16/279 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + + + + N+ L IK+ G ++ G+ F V G+ Sbjct: 1 MKKILLSVLTTFVAVVLAACGGNSDSKTLNSLDKIKQNGVVRIGVFGDKPPFGYVDEKGN 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +G+D+ + ++ +F D +K+Q++ + A R L+S ++DI+ N T R + Sbjct: 61 NQGYDIALAKRIAKELFGDENKVQFVLVEAANRVEFLKSNKVDIILANFTQTPER--AEQ 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F G + K I+SV L ++ + GTT + YF + Sbjct: 119 VDFCLPYMKVALGVAVPKDSNITSVEDLKDKTLLLNKGTTADA----YFTQDYPNIKTLK 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 +++ E AA R DA + D + L+A D P + + ++ +K +APA+ +GD Sbjct: 175 YDQNTETFAALMDKRGDALSHDNTLLFAWVK--DHPDFKMGIKELGNKDVIAPAVKKGDK 232 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 E + ++ + K ++ K DV+ Sbjct: 233 ELKEFID---NLIIKLGQEQFFHKAYDETLKAHFGDDVK 268 >gi|323697540|ref|ZP_08109452.1| extracellular solute-binding protein family 3 [Desulfovibrio sp. ND132] gi|323457472|gb|EGB13337.1| extracellular solute-binding protein family 3 [Desulfovibrio desulfuricans ND132] Length = 268 Score = 221 bits (563), Expect = 2e-55, Method: Composition-based stats. Identities = 60/266 (22%), Positives = 107/266 (40%), Gaps = 13/266 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFD 60 K + + ++ F + + A L D+K +G L CG+ + F V N GFD Sbjct: 1 MKRLVLILALVLSFVFAANAAFAGKLEDVKAKGVLVCGVKDSVNLFGFVDPNTKELVGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD C+ ++ I K ++ + +K R L +D+L+ R+ + + Sbjct: 61 VDICKYIADKIG---VKTEFKVVTSKNRIPMLAQGSVDMLAATMTHKFSRDEQIDFSI-- 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + DGQ ++ K GI+S + L+ + G+T+E + KA I ++ Sbjct: 116 TYFMDGQKLLVEKGSGITSTADLANKKVGTVKGSTSEKNI----KAAQPAAQVISYDEYP 171 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A + + A T D L LK +D P + I+ S P + Q D+E+ + Sbjct: 172 QAFMALKQGKVKAVTTDSGILAGLKAGDDNPEKWEIVGAFFSSEPYGLGVPQNDSEFRDF 231 Query: 241 VSWTHYAMVTAEELGITQKNINQVSK 266 V+ M G K + Sbjct: 232 VNKCLNEMWL---DGTYHKLFKKWMG 254 >gi|296134850|ref|YP_003642092.1| extracellular solute-binding protein family 3 [Thiomonas intermedia K12] gi|295794972|gb|ADG29762.1| extracellular solute-binding protein family 3 [Thiomonas intermedia K12] Length = 297 Score = 221 bits (563), Expect = 2e-55, Method: Composition-based stats. Identities = 57/267 (21%), Positives = 109/267 (40%), Gaps = 8/267 (2%) Query: 1 MYKDFF-VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K F ++IL + + L +K+ + G + F+ + NG G+ Sbjct: 1 MIKKLFGLTILAAAAMSCAQAAELTGTLKKVKETNSITVGYRESSIPFSYLDNNGKPIGY 60 Query: 60 DVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 ++ C + A+ D K+ Y P+ + R L++ ID+ +T ++ R+ + Sbjct: 61 AMELCGKVVDAVKADLKMPGLKVNYTPVTSSNRIPLLENGTIDLECGSTTNSVARQKQVA 120 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 P + + K GIS +QL+G +I +GTT L Y K +M++ I Sbjct: 121 F--GPTYFVINVTAAVKKDSGISDFAQLAGKTIVTTSGTTAVPLLKKYEKTKDMEFKEIY 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E R A+ D L + P+ + ILP + + P + + + D Sbjct: 179 GKDHAESFLLMADGRAAAFVMDDILLAGQIANSKDPAAYKILPGSLRQEPYSMMLRKDDP 238 Query: 236 EWYNIVSWTHYAMVTAEELG-ITQKNI 261 ++ +V T ++ + E+ I K Sbjct: 239 QFKALVDKTIDGVMKSGEINKIYAKWF 265 >gi|294338803|emb|CAZ87137.1| Glutamate/aspartate periplasmic binding protein ABC transporter [Thiomonas sp. 3As] Length = 297 Score = 220 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 56/267 (20%), Positives = 109/267 (40%), Gaps = 8/267 (2%) Query: 1 MYKDFF-VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K F ++IL + + L +K+ + G + F+ + NG G+ Sbjct: 1 MIKKLFGLTILAAAAISCAQAAELTGTLKKVKETNSITVGYRESSIPFSYLDNNGKPIGY 60 Query: 60 DVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 ++ C + A+ D K+ Y P+ + R L++ ID+ +T ++ R+ + Sbjct: 61 AMELCGKVVDAVKADLKMPGLKVNYTPVTSSNRIPLLENGTIDLECGSTTNSVARQKQVA 120 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 P + + K GI+ +QL+G +I +GTT L Y K +M++ I Sbjct: 121 F--GPTYFVINVTAAVKKDSGINDFAQLAGKTIVTTSGTTAVPLLKKYEKTKDMEFKEIY 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E R A+ D L + P+ + ILP + + P + + + D Sbjct: 179 GKDHAESFLLMADGRASAFVMDDILLAGQIANSKDPAAYKILPGSLRQEPYSMMLRKDDP 238 Query: 236 EWYNIVSWTHYAMVTAEELG-ITQKNI 261 ++ +V T ++ + E+ I K Sbjct: 239 QFKALVDKTIDGVMKSGEINKIYAKWF 265 >gi|163734793|ref|ZP_02142231.1| glutamate/aspartate ABC transporter, periplasmic substrate-binding protein [Roseobacter litoralis Och 149] gi|161391898|gb|EDQ16229.1| glutamate/aspartate ABC transporter, periplasmic substrate-binding protein [Roseobacter litoralis Och 149] Length = 288 Score = 220 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 57/271 (21%), Positives = 109/271 (40%), Gaps = 8/271 (2%) Query: 1 MYKDFFVSILCLIILFFTSFST--NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 ++K+ ++ + L + L I G + G V F+ + N + G Sbjct: 2 LFKNTLLTAAVALGLSAPVAMADGHGGTLDKIAASGEIVIGHRESSVPFSYLDENQNPVG 61 Query: 59 FDVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + +D C + A+ D I+Y+P+N K R + + ID+ +T L R+ + Sbjct: 62 YSIDLCMKIVDAVAAELDQELTIKYVPVNPKTRIALMANGTIDLECGSTTNNLTRQQQVE 121 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 P+T+ G + K GI+SV+ L G ++ + GTT E + +A + + Sbjct: 122 Y--LPVTFVTGTKILTRKDSGINSVADLDGMAVALAQGTTNERAVMAAVEAAGLDVKILP 179 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 E + R DAY D L+ L + P + ++ D +S P A + + D+ Sbjct: 180 VRDHAEGMLSLETDRVDAYATDHILLHGLISKSKNPDDFAVVGDFLSFDPYALMVRRDDS 239 Query: 236 EWYNIVSWTHYAMVTAEEL-GITQKNINQVS 265 + + + E+ I K + + Sbjct: 240 AFELVGKKALAEVFRTGEIVEIYSKWFDPLG 270 >gi|332041717|gb|EGI78069.1| extracellular solute-binding protein [Hylemonella gracilis ATCC 19624] Length = 297 Score = 220 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 52/273 (19%), Positives = 107/273 (39%), Gaps = 8/273 (2%) Query: 1 MYKDFFVSILCLIILFFTSF--STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K VS + + + + L IK G + G+ + +G + G Sbjct: 1 MKKHLLVSAFAVALATLAAGVQAQANDTLAKIKSSGKVVMGVRESSPPLSYTLGDGKYTG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 + V+ C+ + +I + ++Y P+ + R +Q+ +DI +T R+ + A Sbjct: 61 YHVELCQNILKSI-APGAAVEYTPVTSANRIPLVQNGTVDIECGSTTNNATRQKDVSFAL 119 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 TY + I S++ L G ++ GTT+ L + + ++K+ + + Sbjct: 120 --TTYVTEVRTAVKSTSKIKSIADLEGKTVATTTGTTSVALLRKHKRGADIKFTEVYGKD 177 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + + R DA+ D + L L + P + VI+ + ++ P+A + + D + Sbjct: 178 HADSFLLLESGRADAFVMDDNLLAGLIAGSKNPKDFVIVGETLNVEPIAIMVRKDDPAFK 237 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 V A + + EL K + P Sbjct: 238 KAVDDYIRAAIKSGELN---KLYTKWFLSPIPP 267 >gi|307730962|ref|YP_003908186.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1003] gi|307585497|gb|ADN58895.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1003] Length = 297 Score = 220 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 49/259 (18%), Positives = 97/259 (37%), Gaps = 9/259 (3%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 + + +A L IK G + G + F+ + G+ +F + A+ + Sbjct: 18 VGAHAQDAGTLKKIKDTGVISLGHRESSIPFSYYDDKQNVIGYSQEFALKVVEAVKQKLN 77 Query: 77 ----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 K++ +P+ ++ R +Q+ +D+ +T R+ + + G + Sbjct: 78 APNLKVKLIPVTSQNRIPLVQNGTVDMECGSTTNNAERQQQVAF--SNTIFVIGTRLMTK 135 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 K GI + L G ++ AGTT+E L + NM + I + E R Sbjct: 136 KDSGIKDWADLKGKTVVTTAGTTSERLLRKMNQDKNMGMNIISAKDHGESFLTLSTGRAA 195 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 A+ D + L + ++ P + VI+ S + + D E+ +V A+ E Sbjct: 196 AFMMDDALLAGERAKSNNPGDFVIVGAPQSHEAYGCMLRKNDPEFKKVVDD---AIAKLE 252 Query: 253 ELGITQKNINQVSKDTTNP 271 G K + + P Sbjct: 253 TSGEADKIYKKWFESPIPP 271 >gi|254253239|ref|ZP_04946557.1| ABC-type amino acid transport/signal transduction systems periplasmic component [Burkholderia dolosa AUO158] gi|124895848|gb|EAY69728.1| ABC-type amino acid transport/signal transduction systems periplasmic component [Burkholderia dolosa AUO158] Length = 300 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 57/279 (20%), Positives = 105/279 (37%), Gaps = 13/279 (4%) Query: 1 MYK-DFFVSILCLIILFFTSFSTNAS---ILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K + ++L L + A L IK G + G + F+ N Sbjct: 1 MNKMKYHKAVLMAAALCAFASGAQAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQV 60 Query: 57 KGFDVDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G+ DF + A+ + +++ +P+ ++ R +Q+ +DI +T L R+ Sbjct: 61 VGYSRDFQMKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLERQQ 120 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + G + K GI + L G ++ AGTT+E L M + Sbjct: 121 QAAF--SNTIFVIGTRLMTKKDSGIKDFADLKGKTVVTTAGTTSERLLRKMNNDKQMGMN 178 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 I + + + R A+ D + L + +P E VI+ S+ + + Sbjct: 179 IISAKDHGDSFNTLESGRAVAFMMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRK 238 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 GDTE+ +V A+ E+ G K + ++ P Sbjct: 239 GDTEFKKVVDD---AIAQVEKSGEAAKIYAKWFENPIPP 274 >gi|42779689|ref|NP_976936.1| glutamine ABC transporter, glutamine-binding protein [Bacillus cereus ATCC 10987] gi|42735606|gb|AAS39544.1| glutamine ABC transporter, glutamine-binding protein [Bacillus cereus ATCC 10987] Length = 286 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 60/284 (21%), Positives = 112/284 (39%), Gaps = 22/284 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTN-----------ASILGDIKKRGFLKCGINTGLVGFAE 49 M K I+ L+ + + +N + + +IK+RG L + T F Sbjct: 1 MKKFLTFIIIGLLSILVVACGSNEKKTEKTSAKPSGKIEEIKERGELVVAVFTDKPPFGY 60 Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 V +G GF++D + + + D SK++++P+ A R LQS ++D + N T Sbjct: 61 VDKDGKNVGFEIDMAKRFAKDLLGDESKVKFVPVEAASRIPYLQSDKVDFVLANMTATDE 120 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 R+ + ++ I SV L G + V GTT ++ L K Sbjct: 121 RKKVVDF--TNPHLKVAVQVLVKDGSPIQSVKDLEGKKVIVTKGTTADIYLTKNMK---- 174 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 I F++ E A + R D+Y D L + N P H++ + +A A Sbjct: 175 NVELIKFDKNTEALQALKDGRADSYAQDNLVLLSWA--NKNPGFHLLKDKLGGDDLIAIA 232 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 + +G+ E ++ W + + + ++ K+ P + Sbjct: 233 VKKGNKEVHD---WVNKELEKLGKENFLHTLYDKHLKEEFGPQI 273 >gi|323527327|ref|YP_004229480.1| family 3 extracellular solute-binding protein [Burkholderia sp. CCGE1001] gi|323384329|gb|ADX56420.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1001] Length = 297 Score = 220 bits (561), Expect = 3e-55, Method: Composition-based stats. Identities = 49/259 (18%), Positives = 97/259 (37%), Gaps = 9/259 (3%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 + + +A L IK G + G + F+ + G+ +F + A+ + Sbjct: 18 VGAHAQDAGTLKKIKDTGVISLGHRESSIPFSYYDDKQNVIGYSQEFALKVVDAVKQKLN 77 Query: 77 ----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 K++ +P+ ++ R +Q+ +D+ +T R+ + + G + Sbjct: 78 APNLKVKLIPVTSQNRIPLVQNGTVDMECGSTTNNAERQQQVAF--SNTIFVIGTRLMTK 135 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 K GI + L G ++ AGTT+E L + NM + I + E R Sbjct: 136 KDSGIKDWADLKGKTVVTTAGTTSERLLRKMNQDKNMGMNIISAKDHGESFLTLSTGRAA 195 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 A+ D + L + ++ P + VI+ S + + D E+ +V A+ E Sbjct: 196 AFMMDDALLAGERAKSNNPGDFVIVGAPQSHEAYGCMLRKNDPEFKKVVD---EAIAKVE 252 Query: 253 ELGITQKNINQVSKDTTNP 271 G K + + P Sbjct: 253 TSGEADKIYKKWFESPIPP 271 >gi|171060694|ref|YP_001793043.1| extracellular solute-binding protein [Leptothrix cholodnii SP-6] gi|170778139|gb|ACB36278.1| extracellular solute-binding protein family 3 [Leptothrix cholodnii SP-6] Length = 298 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 51/279 (18%), Positives = 111/279 (39%), Gaps = 12/279 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V ++ + + L IK + G+ + +G + G+ Sbjct: 1 MKKTLLVF---AALMAMGAAQAQSDTLKKIKDSASVTMGVRESSGALSLTLGDGKYVGYH 57 Query: 61 VDFCRA----LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 V+ C+ + + I+Y + ++ R +Q+ +DI +T R+ + Sbjct: 58 VELCQRALADVQKLLGLPKLDIKYQAVTSQNRIPLVQNGTVDIECGSTTNNAARQKDVSF 117 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 A TY + + GI+S++QL G S+ GTT+ L + +A+ + ++ + Sbjct: 118 AV--TTYVEEVRIAVKGSSGITSIAQLGGKSVATTTGTTSVQLLRKHERANGVNFNEVFG 175 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + + R DA+ D L + P++ I+ +++S P+A + + D Sbjct: 176 KDHADSFLLLESGRADAFVMDGQILAGNIAKSKAPADFKIVGEVLSVEPIAIMMRKDDPA 235 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 + + + AM+ + E+ K ++ P R Sbjct: 236 FKKAIDASLTAMMKSGEI---AKIYDKWFMQPIPPSNTR 271 >gi|46202161|ref|ZP_00208410.1| COG0834: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Magnetospirillum magnetotacticum MS-1] Length = 542 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 55/262 (20%), Positives = 108/262 (41%), Gaps = 7/262 (2%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 ++ L + A L + G L GI + + G+ +D C Sbjct: 1 MAALVVFASLPALAEDLAGTLKKVGDSGTLTLGIRESSYPLSYLDDGQKPIGYHIDICTR 60 Query: 67 LSSAIFD----DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 L+ A+ K++ LP+ ++ R +Q+ +D+ +T R + A P T Sbjct: 61 LAEAVKTRLALPALKVETLPVTSQNRIPLVQNGTVDLECGSTTNNEARARQVAFA--PTT 118 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 + + K GI+S++QL+G + + GTT+ + + K N+ + I + + Sbjct: 119 FVTKVRMAVKKSSGITSIAQLAGKPVAITTGTTSVQLVRAHKKGQNVAFKEIYGKDHADS 178 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 R A+ D + L L T+ P ++ I+ +++S P+A + + D ++ +V Sbjct: 179 FLLLETDRAVAFVMDDNLLAGLIATSKAPGDYAIVGEVLSVEPIAIMLRRDDPQFKALVD 238 Query: 243 WTHYAMVTAEE-LGITQKNINQ 263 T AM+ + E I K Sbjct: 239 DTVKAMMASGEVERIYAKWFQS 260 >gi|150017371|ref|YP_001309625.1| extracellular solute-binding protein [Clostridium beijerinckii NCIMB 8052] gi|149903836|gb|ABR34669.1| extracellular solute-binding protein, family 3 [Clostridium beijerinckii NCIMB 8052] Length = 290 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 71/299 (23%), Positives = 126/299 (42%), Gaps = 27/299 (9%) Query: 1 MY--KDFFVSILCLIILFFT--------------SFSTNASILGDIKKRGFLKCGINTGL 44 M K ++L ++ + S ++S L DIKKRG +K G+ + Sbjct: 1 MKSIKKIVAALLLSTVVVGSFVGCGNSAQTNNGDSNKASSSSLEDIKKRGTIKIGVFSDK 60 Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 F V + G +GFDV + + + D SK++++ ++A R L+SK++DI+ N Sbjct: 61 APFGYVDSEGKNQGFDVYVAKRFAKDLLGDESKVEFVLVDAASRVSYLESKKVDIIMANF 120 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164 T R+ + A G + I+S QL G + V GTT E Y Sbjct: 121 TVTDERKEKVDFAN--PYMKVSLGVVSPDGAKITSEDQLKGKKVIVAKGTTAET----YM 174 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 ++ + +E+ EI A + R DA D + + A D P V +P + S Sbjct: 175 TKNHPDVELVKYEQYSEIFQALKDKRGDAILSDNTEVIAWAK--DNPGFSVGIPSLGSTD 232 Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSS 283 +APA+ +G+TE + W + + + + K ++ K + + L ++ Sbjct: 233 TIAPAVTKGNTELRD---WINTELESLGKENFVHKAYDETLKSVYGAEFEDSLVVEGGK 288 >gi|239826929|ref|YP_002949553.1| extracellular solute-binding protein family 3 [Geobacillus sp. WCH70] gi|239807222|gb|ACS24287.1| extracellular solute-binding protein family 3 [Geobacillus sp. WCH70] Length = 286 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 61/289 (21%), Positives = 115/289 (39%), Gaps = 37/289 (12%) Query: 1 MYKD----FFVSILCLIILFFTSFSTNAS---------------------ILGDIKKRGF 35 M + ++++ + +L T+ + +S L IKKRG Sbjct: 1 MKRKIVWKMWITLALIALLSITALAGCSSESSTSNKGDGAKSTETSGGTNTLEKIKKRGK 60 Query: 36 LKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L G+ L F G +GFD+D + L+ I D +KI+ + +K R L + Sbjct: 61 LVVGVKYDLNLFGLKNPETGKVEGFDIDIAKGLAKKILGDENKIELKEVTSKTRIPMLNN 120 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAG 153 +ID + T R+ + + + GQ ++ K I+SV L G ++ G Sbjct: 121 GEIDAIIATMTITEERKKEVDF--SDVYFMAGQSLLVKKDSKINSVKDLKKGMTVLTAKG 178 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 +T+ + + + FE E A +A + DA T D + L + + Sbjct: 179 STSAQNIRKVAPE----VNVLEFENYAEAFTALKAGQGDALTTDNALLLGMAKQDPN--- 231 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNI 261 + +L + ++ P A+ +GD E+ +++ + E I +K I Sbjct: 232 YRVLDETFTEEPYGIAVRKGDKEFLQVINEYLKEIKENGEYDKIYEKWI 280 >gi|167837860|ref|ZP_02464743.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia thailandensis MSMB43] Length = 297 Score = 219 bits (559), Expect = 4e-55, Method: Composition-based stats. Identities = 50/272 (18%), Positives = 100/272 (36%), Gaps = 9/272 (3%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 + + L + + L IK G + G + F+ + G+ DF Sbjct: 5 KAMLVVAALSTFAGGAIAQETGTLKKIKDTGVIALGHRESSIPFSYYDQSQQVVGYSRDF 64 Query: 64 CRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 + A+ + +++ +P+ ++ R +Q+ +DI +T L R+ Sbjct: 65 QMKVVDAVKKKLNLSNLQVRNIPVTSQNRIPLVQNGTVDIECGSTTNNLDRQKQAAF--S 122 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G + K GI + L G ++ AGTT+E L + + M + I + Sbjct: 123 DTIFVIGTRLMTKKDSGIKDFADLKGKTVVTTAGTTSERLLREMNNKNQMGMNIISAKDH 182 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E R A+ D + L + +P E VI+ S+ + + D + Sbjct: 183 GESFQTLETGRAVAFMMDDALLAGERAKAKQPGEWVIVGKPQSQEAYGCMMRKDDPAFKK 242 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 +V A+ E+ G K ++ ++ P Sbjct: 243 VVDD---AIAQVEKSGEAAKIYSKWFENPIPP 271 >gi|317153800|ref|YP_004121848.1| family 3 extracellular solute-binding protein [Desulfovibrio aespoeensis Aspo-2] gi|316944051|gb|ADU63102.1| extracellular solute-binding protein family 3 [Desulfovibrio aespoeensis Aspo-2] Length = 268 Score = 219 bits (559), Expect = 4e-55, Method: Composition-based stats. Identities = 53/266 (19%), Positives = 104/266 (39%), Gaps = 13/266 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFD 60 K V + ++ F + NA + D+K RG L CG+ + F V + G D Sbjct: 1 MKRLIVVLALVLSFVFGVAAANAGKIEDVKARGVLVCGVKDSVNLFGFVDPDTKELVGLD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D C+ ++ + K ++ + + R L +DIL+ R+ + + Sbjct: 61 IDVCKYIADKLG---VKTEFKVVTSSNRIPMLVQGSVDILAATMTHKFSRDEQIDFSI-- 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + DGQ ++ K GI S + L+ + G+T+E + + A I ++ Sbjct: 116 TYFMDGQKLLVEKGAGIKSTADLANKKVGTVKGSTSEKNIKNAQPASQ----VISYDEYP 171 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A + + A T D L LK +D P + I+ + + P + + D+++ + Sbjct: 172 QAFMALKQGKVVAVTTDSGILAGLKAGDDNPDKWEIVGEFFASEPYGLGVPENDSKFRDF 231 Query: 241 VSWTHYAMVTAEELGITQKNINQVSK 266 V+ M G + Sbjct: 232 VNLCLNEMWL---DGTYHAMFKKWMG 254 >gi|332179316|gb|AEE15005.1| ABC-type transporter, periplasmic subunit family 3 [Thermodesulfobium narugense DSM 14796] Length = 270 Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats. Identities = 64/278 (23%), Positives = 110/278 (39%), Gaps = 23/278 (8%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASI----------LGDIKKRGFLKCGINTGLVGFA 48 M K F+ + L+ S A + IK RG L G+ + F Sbjct: 1 MKNLKFLFLGFIVLLGFVIAGCSQQAQKPQESSAVPPDIKAIKDRGVLNVGVKYDVPKFG 60 Query: 49 EVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 G +GF++D ++ I +P K+ + + K R L + ++D++ T Sbjct: 61 YKDPKTGKVEGFEIDIAHEMAKKILGNPDKVNLIAVTPKTRGPLLDNGEVDMVIATFTIT 120 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 RE S + + DG ++ K GI S + L+G ++ V TT+ + KA Sbjct: 121 PEREKSFNFSI--PYFTDGVALLVKKDSGIKSFTDLNGKTVGVAQSATTKGAIEAEAKAK 178 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 +K + + F EI AA + R A++ D + LY ILPD + Sbjct: 179 GIKVNVLEFASYPEIKAALESGRVQAFSTDGAILYGYL-----DDSTTILPDRFAPQNYG 233 Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 A+ +G+ +V+ T M ++ G QK + Sbjct: 234 IAMKKGNDGLLKLVNSTLEEM---QKDGTLQKLKEKWG 268 >gi|260891043|ref|ZP_05902306.1| CjaA protein [Leptotrichia hofstadii F0254] gi|260859070|gb|EEX73570.1| CjaA protein [Leptotrichia hofstadii F0254] Length = 279 Score = 219 bits (558), Expect = 6e-55, Method: Composition-based stats. Identities = 61/279 (21%), Positives = 115/279 (41%), Gaps = 16/279 (5%) Query: 1 MYKDF-----FVSILCLIILFFTSF--STNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M K+F ++IL L + + S + IKK G ++ G+ F V N Sbjct: 1 MKKNFERLVKIIAILVLGVFAISCGKGSAEPGSIEAIKKAGKIRIGVFGDKPPFGFVDEN 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G +G+D+ + L+ + D +KI+++ L A R L S ++DI+ N T R+ Sbjct: 61 GKNQGYDIYLAKRLAKDLLGDENKIEFITLEAANRVEYLLSNKVDIILANFTVTDERKQK 120 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + A G + + I V +L G + V GTT E+ YF ++ Sbjct: 121 VDFA--KPYMKVSLGIVSPEGAPIKDVKELKGKKLIVNKGTTAEI----YFTKNHPDIEL 174 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + +++ E A R A D + ++A + P V + + + +APA+ +G Sbjct: 175 LKYDQNTETFNALLDKRGAALAHDNTLVFAWAT--ENPGFVVDIKQLGEQDYIAPAVRKG 232 Query: 234 DTEWYNIVSWTHYAMVTAE-ELGITQKNINQVSKDTTNP 271 + E + ++ A+ + + V + +P Sbjct: 233 NKELLDWLNTEIDALTKEGFFEKAYKATLEPVYGNKVDP 271 >gi|242309235|ref|ZP_04808390.1| amino-acid ABC transporter periplasmic solute-binding protein [Helicobacter pullorum MIT 98-5489] gi|239524276|gb|EEQ64142.1| amino-acid ABC transporter periplasmic solute-binding protein [Helicobacter pullorum MIT 98-5489] Length = 273 Score = 218 bits (557), Expect = 6e-55, Method: Composition-based stats. Identities = 60/270 (22%), Positives = 114/270 (42%), Gaps = 16/270 (5%) Query: 1 MYKDFFVSILCLIILFFTSFST----NASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K F+ L ++ L+F + + L IK++G + G+ + F + +G Sbjct: 1 MRKILFIMFLGILSLWFVGCGQTQTNSNNTLEAIKQKGVVTIGVFSDKPPFGFINKDGKN 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFDV + ++ + D +K+++ + A R L+S ++DI+ N T RE + Sbjct: 61 DGFDVYLSKQIAKDLLGDENKVKFELVEAASRVEFLKSGKVDIIMANFTKTPEREAVVDF 120 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 A Y ++ K I ++ L G + V GTT + YF ++ + + + Sbjct: 121 AA---PYMKVALGVVSKNGEIKTIEDLKGKKLIVNKGTTADF----YFSKNHPEIELLKY 173 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 ++ E A + R A D ++A + P V + + ++ +APA+ +GD E Sbjct: 174 DQNTESFLALKDGRGVALAHDNLLVFAWAK--ENPGFEVGITKMGNEDVIAPAVKKGDKE 231 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSK 266 W + + T E G K + Sbjct: 232 LLE---WLNQEIQTLTENGFMNKAYQETLA 258 >gi|167571226|ref|ZP_02364100.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia oklahomensis C6786] Length = 297 Score = 218 bits (557), Expect = 8e-55, Method: Composition-based stats. Identities = 48/272 (17%), Positives = 100/272 (36%), Gaps = 9/272 (3%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 + + L + + L IK G + G + F+ + G+ DF Sbjct: 5 KAMLMVAALSTFAGGAIAQETGTLKKIKDTGVIALGHRESSIPFSYYDQSQQVVGYSRDF 64 Query: 64 CRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 + A+ + +++ +P+ ++ R +Q+ +DI +T L R+ Sbjct: 65 QMKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLDRQKQAAF--S 122 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G + K G+ + L G ++ AGTT+E L + + M + I + Sbjct: 123 NTIFVIGTRLMTKKDSGVKDFADLKGKTVVTTAGTTSERLLREMNNKNQMGMNIISAKDH 182 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R A+ D + L + +P E VI+ S+ + + D + Sbjct: 183 GDSFQTLETGRAVAFMMDDALLAGERAKAKQPGEWVIVGKPQSQEAYGCMMRKDDPAFKK 242 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 +V A+ E+ G K ++ ++ P Sbjct: 243 VVDD---AIAQVEKSGEAAKIYSKWFENPIPP 271 >gi|167564084|ref|ZP_02357000.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia oklahomensis EO147] Length = 297 Score = 218 bits (557), Expect = 8e-55, Method: Composition-based stats. Identities = 48/272 (17%), Positives = 100/272 (36%), Gaps = 9/272 (3%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 + + L + + L IK G + G + F+ + G+ DF Sbjct: 5 KAMLMVAALSTFAGGAIAQETGTLKKIKDTGVIALGHRESSIPFSYYDQSQQVVGYSRDF 64 Query: 64 CRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 + A+ + +++ +P+ ++ R +Q+ +DI +T L R+ Sbjct: 65 QMKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLDRQKQAAF--S 122 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G + K G+ + L G ++ AGTT+E L + + M + I + Sbjct: 123 NTIFVIGTRLMTKKDSGVKDFADLKGKTVVTTAGTTSERLLREMNNKNQMGMNIISAKDH 182 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R A+ D + L + +P E VI+ S+ + + D + Sbjct: 183 GDSFQTLETGRAVAFMMDDALLAGERAKAKQPGEWVIVGKPQSQEAYGCMMRKDDPAFKK 242 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 +V A+ E+ G K ++ ++ P Sbjct: 243 VVDD---AIAQVEKSGEAAKIYSKWFENPIPP 271 >gi|254518100|ref|ZP_05130156.1| amino-acid ABC transporter periplasmic solute-binding protein [Clostridium sp. 7_2_43FAA] gi|226911849|gb|EEH97050.1| amino-acid ABC transporter periplasmic solute-binding protein [Clostridium sp. 7_2_43FAA] Length = 288 Score = 218 bits (556), Expect = 9e-55, Method: Composition-based stats. Identities = 67/281 (23%), Positives = 114/281 (40%), Gaps = 20/281 (7%) Query: 1 MYKDF---FVSILCLIILFFTSFSTNASI--LGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K ++ L +L S + IKK G ++ G+ + F V G Sbjct: 14 MKKFLSLILTLVIALGVLVGCGSKAEESKASIDVIKKAGKIRIGVFSDKPPFGFVDEKGA 73 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +G+DV + L+ + D +K++++ + A R LQS ++DI+ N T R+ + Sbjct: 74 NQGYDVYLAKRLAKDLLGDENKVEFVLVEAANRVEYLQSNKVDIILANFTVTPERKEKVD 133 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 A G + I SV L G + V GTT E YF + + Sbjct: 134 FA--TPYMKVSLGVVSPDGAPIKSVDDLKGKKLLVNKGTTAES----YFTKNYPDIELVK 187 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 FE+ E AA + R A D + L+A N+ + + + + +APA+ +GD Sbjct: 188 FEQNTETFAALKDGRGAALAHDNTLLFAWARENEGYDTY--ISSLGEEDAIAPAVKKGDA 245 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNIN----QVSKDTTNPD 272 E W + + T + G ++ + V DT P+ Sbjct: 246 ELLE---WLNKEVDTLIKEGFFKEAYDATLAPVYGDTVKPE 283 >gi|1930092|gb|AAB51532.1| outer membrane protein [Campylobacter jejuni] Length = 279 Score = 218 bits (556), Expect = 9e-55, Method: Composition-based stats. Identities = 60/279 (21%), Positives = 116/279 (41%), Gaps = 16/279 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + + + + N+ L IK+ G ++ G+ F V G+ Sbjct: 1 MKKILLSVLTTFVAVVLAACGGNSDSKTLNSLDKIKQNGVVRIGVFGDKPPFGYVDEKGN 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +G+D+ + ++ +F D +K+Q++ + A R L+S ++DI+ N T R + Sbjct: 61 NQGYDIALAKRIAKELFGDENKVQFVLVEAANRVEFLKSNKVDIILANFTQTPER--AEQ 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F G + K I+SV L ++ + GTT + YF + Sbjct: 119 VDFCLPYMKVALGVAVPKDSNITSVEDLIDKTLLLNKGTTADA----YFTQDYPNIKTLK 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 +++ E AA R DA + D + L+A D P + + ++ +K +APA+ +GD Sbjct: 175 YDQNTETFAALMDKRGDALSHDNTLLFAWVK--DHPDFKMGIKELGNKDVIAPAVKKGDK 232 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 E + ++ + K ++ K DV+ Sbjct: 233 ELKEFID---NLIIKLGQEQFFHKAYDETLKAHFGDDVK 268 >gi|315638784|ref|ZP_07893956.1| ABC superfamily ATP binding cassette transporter, binding protein [Campylobacter upsaliensis JV21] gi|315481002|gb|EFU71634.1| ABC superfamily ATP binding cassette transporter, binding protein [Campylobacter upsaliensis JV21] Length = 282 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 59/277 (21%), Positives = 116/277 (41%), Gaps = 14/277 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS---ILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K + +F + ++ S + IK G +K G+ F V G + Sbjct: 6 MKKILLSIFTAFVAVFLAACDSSESGVNSIERIKNAGVVKIGVFGDKPPFGYVDEKGANQ 65 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G+D+ F + ++ + D +K++++ + A R L+S ++DI+ N T R + A Sbjct: 66 GYDIIFAKRIAKELLGDENKVEFVLVEAANRVEFLKSNKVDIILANFTQTPERAEQVDFA 125 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 G ++ + I SV L ++ + GTT + YF + + F+ Sbjct: 126 L--PYMKVALGVVVPEDSEIKSVEDLKDKTLILNKGTTADA----YFTKNYADIKTLKFD 179 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + E AA R DA D + L+A +RP V++ ++ ++ +APA+ +GD E Sbjct: 180 QNTETFAALMDKRGDALAHDNTLLFAWVK--ERPDYKVVIKELGNQDVIAPAVKKGDKEL 237 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 + +++ K ++ K D++ Sbjct: 238 KEFID---NLIISLAAEQFFHKAYDESLKAHFGADIK 271 >gi|186477321|ref|YP_001858791.1| extracellular solute-binding protein [Burkholderia phymatum STM815] gi|184193780|gb|ACC71745.1| extracellular solute-binding protein family 3 [Burkholderia phymatum STM815] Length = 297 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 50/276 (18%), Positives = 102/276 (36%), Gaps = 10/276 (3%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + + L + + + +A L IK G + G + F+ + G+ Sbjct: 1 MKVKKAALLLATLGLFTVGAQAQDAGTLKKIKDTGVISLGHRESSIPFSYYDDKQNVIGY 60 Query: 60 DVDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +F + A+ + K++ P+ ++ R +Q+ +D+ +T R+ + Sbjct: 61 SQEFALKVVDAVKQKLNMPNLKVKLTPVTSQNRIPLVQNGTVDLECGSTTNNAERQQQVS 120 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + G + K G+ + L G ++ AGTT+E L + NM + I Sbjct: 121 F--SNTIFVIGTRLMTKKDSGVKDWADLKGKTVVTTAGTTSERLLRKMNQDKNMGMNIIS 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E R A+ D + L + ++ P + VI+ S + + D Sbjct: 179 AKDHGESFLTLSTGRAAAFMMDDALLAGERAKSNNPGDFVIVGAPQSHEAYGCMLRKNDP 238 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 E+ +V A+ E G + + + P Sbjct: 239 EFKKVVDD---AIAKVETSGEASQIYKKWFESPIPP 271 >gi|134294747|ref|YP_001118482.1| extracellular solute-binding protein [Burkholderia vietnamiensis G4] gi|134137904|gb|ABO53647.1| L-aspartate-binding protein / L-glutamate-binding protein [Burkholderia vietnamiensis G4] Length = 297 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 51/274 (18%), Positives = 101/274 (36%), Gaps = 9/274 (3%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 Y+ + I L + + L IK G + G + F+ N G+ Sbjct: 3 YQKAVLMIAALCAFASGAHAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGYSR 62 Query: 62 DFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 DF + A+ + +++ +P+ ++ R +Q+ +DI +T L R+ Sbjct: 63 DFQMKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLERQQQAAF- 121 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + G + K G+ + L G ++ AGTT+E L + I + Sbjct: 122 -SDTIFVIGTRLMTKKDSGVKDFADLKGKTVVTTAGTTSERLLRKMNNDKQLGMSIISAK 180 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + + R A+ D + L + +P E VI+ S+ + +GD ++ Sbjct: 181 DHGDSFNTLESGRAVAFMMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDADF 240 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 +V A+ E+ G K + ++ P Sbjct: 241 KKVVD---EAISQVEKSGEAAKIYAKWFENPIPP 271 >gi|319405905|emb|CBI79537.1| amino-acid ABC transporter binding protein [Bartonella sp. AR 15-3] Length = 301 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 61/274 (22%), Positives = 106/274 (38%), Gaps = 9/274 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + I + + + L IK+ G + G+ G A NG + GF Sbjct: 1 MRKLFLIFIAAIFMGLTSIAHATNDTLEKIKRTGEITLGVRESS-GLAYALGNGKYTGFH 59 Query: 61 VDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 + + + I P K+ YLP+ ++ R L++ D +T R + A Sbjct: 60 TEMAEHIINDISKKIGQPIKVNYLPITSQNRIPLLKNGTYDFECGSTTNDSARNKEVAFA 119 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 TY + + K GI S+ L+G + GTT + + N+ + + + Sbjct: 120 --YTTYVETVKIAVKKNSGIKSIDDLNGKKVATTTGTTAVQLIRKNKRQKNIHFQVVNGK 177 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E + R DA+ DIS L A + PS++VIL +S P+A + D + Sbjct: 178 DHGESFLLLESGRADAFVMDISILSANIAKSKNPSDYVILDTTLSVEPIACMLRLNDKNF 237 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 ++ + + L K N+ + P Sbjct: 238 EQAINDSIVRQINDASL---AKLYNKWFMEPIPP 268 >gi|319404432|emb|CBI78035.1| amino-acid ABC transporter binding protein [Bartonella rochalimae ATCC BAA-1498] Length = 301 Score = 217 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 57/274 (20%), Positives = 105/274 (38%), Gaps = 9/274 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + I + + L IK+ G + G+ G A NG + GF Sbjct: 1 MRKSFVIFIAAIFMGLTNIAHATNDTLEKIKRTGEITLGVRESS-GLAYALGNGKYTGFH 59 Query: 61 VDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 + + + I P K+ Y P+ ++ R L++ D +T R A Sbjct: 60 TEMAERIINDISKKIGQPIKVNYQPITSQNRIPLLKNGTYDFECGSTTNDSARNKEAAFA 119 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 TY + ++ K GI S+ L+G + GTT + + N+ + + + Sbjct: 120 --YTTYVESVKIVVKKNSGIQSIDDLNGKKVATTTGTTAVQLIRKNKRQKNIHFEVVNGK 177 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + + + R DA+ D S L A + PS+++IL +S P+A + D + Sbjct: 178 DHGDSFLSLESGRADAFVMDTSILSAHIAKSKNPSDYIILDTTLSVEPIACMLRLNDKNF 237 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 ++ + + G +K N+ + P Sbjct: 238 EQTINDSIVRQIN---DGSLEKLYNKWFMEPIPP 268 >gi|56697500|ref|YP_167868.1| glutamate/aspartate ABC transporter, periplasmic substrate-binding protein [Ruegeria pomeroyi DSS-3] gi|56679237|gb|AAV95903.1| glutamate/aspartate ABC transporter, periplasmic substrate-binding protein [Ruegeria pomeroyi DSS-3] Length = 287 Score = 217 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 58/272 (21%), Positives = 104/272 (38%), Gaps = 6/272 (2%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K + L + + L I G + G V FA + N G+ +D Sbjct: 5 KPILAGAVALGLALPVAAQDRTGTLAKIDASGEIVIGHRESSVPFAYLDENQKPVGYSID 64 Query: 63 FCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 C + A+ I+Y+P+N K R + + ID+ +T L R+ + Sbjct: 65 LCMKIVEAVSAELGKELSIKYVPVNPKTRIALMANGTIDLECGSTTNNLTRQEQVEY--L 122 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 P T+ G ++ K GISSV+ L G ++ + GTT E + + + + Sbjct: 123 PTTFITGTKLMVRKGSGISSVADLDGKAVALAQGTTNERAVKAAIETMGLDVKVLPVRDH 182 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E + R D Y D L+ L + P ++ D +S P A + + D+ + Sbjct: 183 AEGMLSLETDRVDVYATDHILLFGLIAKSKTPDAFEVVGDFLSFDPYALMVRRDDSAFEL 242 Query: 240 IVSWTHYAMVTAEEL-GITQKNINQVSKDTTN 270 + A+ + E+ I K + + T+ Sbjct: 243 VGKKALAAVFRSGEIDAIYAKWFDPLGVGQTD 274 >gi|168240514|ref|ZP_02665446.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194450029|ref|YP_002044700.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194408333|gb|ACF68552.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|205339899|gb|EDZ26663.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 302 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 50/278 (17%), Positives = 100/278 (35%), Gaps = 14/278 (5%) Query: 3 KDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 + ++L + + + + S L I K G + G V F+ Sbjct: 4 RKLTTAMLAMGLSAGLAHAEDGAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVV 63 Query: 58 GFDVDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ D+ A+ A+ +K ++ +P+ ++ R LQ+ D +T L R+ Sbjct: 64 GYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQ 123 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + G + K I L G ++ V +GTT+E+ L + M Sbjct: 124 AAF--SDTIFVVGTRLLTKKGGDIKDFPDLKGKAVVVTSGTTSEILLHKLNEEQKMGMRI 181 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + + + R A+ D + L + +P I+ S+ + + Sbjct: 182 ISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKN 241 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 D E+ ++ T T+ E +K ++ K+ P Sbjct: 242 DPEFKKLMDDTIAQAQTSGE---AEKWFDKWFKNPIPP 276 >gi|171321021|ref|ZP_02910008.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MEX-5] gi|171093718|gb|EDT38862.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MEX-5] Length = 297 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 50/274 (18%), Positives = 101/274 (36%), Gaps = 9/274 (3%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 Y+ + + L + + L IK G + G + F+ N G+ Sbjct: 3 YQKAVLMVAALCAFASGAHAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGYSR 62 Query: 62 DFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 +F + A+ S +++ +P+ ++ R +Q+ +DI +T R+ Sbjct: 63 EFQMKIVDAVKKKLSLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNTERQQQAAF- 121 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + G + K G+ + L G ++ AGTT+E L + + I + Sbjct: 122 -SDTIFVIGTRLMTKKDSGVKDFTDLKGKTVVTTAGTTSERLLRKMNNDKQLGMNIISAK 180 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + + R A+ D + L + +P E VI+ S+ + +GDT++ Sbjct: 181 DHGDSFNTLESGRAVAFMMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDTDF 240 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 +V A+ E+ G K + + P Sbjct: 241 KKVVDD---AISQVEKSGEAAKIYAKWFESPIPP 271 >gi|91785182|ref|YP_560388.1| ABC glutamate/aspartate transporter, periplasmic ligand binding protein [Burkholderia xenovorans LB400] gi|91689136|gb|ABE32336.1| L-glutamate-binding protein / L-aspartate-binding protein [Burkholderia xenovorans LB400] Length = 297 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 48/259 (18%), Positives = 96/259 (37%), Gaps = 9/259 (3%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 + + +A L IK G + G + F+ + G+ +F + A+ + Sbjct: 18 VGAHAQDAGTLKKIKDTGVISLGHRESSIPFSYYDDKQNVIGYSQEFALKVVDAVKQKLN 77 Query: 77 ----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 K++ P+ ++ R +Q+ +D+ +T R+ + + G + Sbjct: 78 MPNLKVKLTPVTSQNRIPLVQNGTVDMECGSTTNNAERQQQVAF--SNTIFVIGTRLMTK 135 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 K GI + L G ++ AGTT+E L + +M + I + E R Sbjct: 136 KDSGIKDWADLKGKTVVTTAGTTSERLLRKMNQDKSMGMNIISAKDHGESFLTLSTGRAA 195 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 A+ D + L + ++ P + VI+ S I + D E+ +V A+ E Sbjct: 196 AFMMDDALLAGERAKSNNPGDFVIVGAPQSHEAYGCMIRKNDPEFKKVVDD---AIAKVE 252 Query: 253 ELGITQKNINQVSKDTTNP 271 G + + + P Sbjct: 253 TSGEADQIYKKWFETPIPP 271 >gi|296162982|ref|ZP_06845759.1| extracellular solute-binding protein family 3 [Burkholderia sp. Ch1-1] gi|295886776|gb|EFG66617.1| extracellular solute-binding protein family 3 [Burkholderia sp. Ch1-1] Length = 297 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 51/276 (18%), Positives = 102/276 (36%), Gaps = 10/276 (3%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + + L + + + +A L IK G + G + F+ + G+ Sbjct: 1 MKVKKAALLLATLGLFTVGAHAQDAGTLKKIKDTGVISLGHRESSIPFSYYDDKQNVIGY 60 Query: 60 DVDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +F + A+ + K++ P+ ++ R +Q+ +D+ +T R+ + Sbjct: 61 SQEFALKVVDAVKQKLNMPNLKVKLTPVTSQNRIPLVQNGTVDMECGSTTNNAERQQQVA 120 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + G + K GI + L G ++ AGTT+E L + +M + I Sbjct: 121 F--SNTIFVIGTRLMTKKDSGIKDWADLKGKTVVTTAGTTSERLLRKMNQDKSMGMNIIS 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E R A+ D + L + ++ P++ VI+ S I + D Sbjct: 179 AKDHGESFLTLSTGRAAAFMMDDALLAGERAKSNNPADFVIVGAPQSHEAYGCMIRKNDP 238 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 E+ +V A+ E G + + P Sbjct: 239 EFKKVVDD---AIAKVETSGEADAIYKKWFESPIPP 271 >gi|204930506|ref|ZP_03221436.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204320440|gb|EDZ05643.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 302 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 50/278 (17%), Positives = 100/278 (35%), Gaps = 14/278 (5%) Query: 3 KDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 + ++L + + + + S L I K G + G V F+ Sbjct: 4 RKLTTAMLVMGLSAGLAHAEDGAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVV 63 Query: 58 GFDVDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ D+ A+ A+ +K ++ +P+ ++ R LQ+ D +T L R+ Sbjct: 64 GYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQ 123 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + G + K I L G ++ V +GTT+E+ L + M Sbjct: 124 AAF--SDTIFVVGTRLLTKKGGDIKDFPDLKGKAVVVTSGTTSEILLHKLNEEQKMGMRI 181 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + + + R A+ D + L + +P I+ S+ + + Sbjct: 182 ISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKN 241 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 D E+ ++ T A+ G +K ++ K+ P Sbjct: 242 DPEFKKLMDDTI---AQAQASGEAEKWFDKWFKNPIPP 276 >gi|16764042|ref|NP_459657.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56414206|ref|YP_151281.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197363130|ref|YP_002142767.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|16419178|gb|AAL19616.1| glutamate/aspartate transporter [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56128463|gb|AAV77969.1| ABC transporter periplasmic binding protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197094607|emb|CAR60128.1| ABC transporter periplasmic binding protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|326622408|gb|EGE28753.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 308 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 50/278 (17%), Positives = 100/278 (35%), Gaps = 14/278 (5%) Query: 3 KDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 + ++L + + + + S L I K G + G V F+ Sbjct: 10 RKLTTAMLVMGLSAGLAHAEDGAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVV 69 Query: 58 GFDVDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ D+ A+ A+ +K ++ +P+ ++ R LQ+ D +T L R+ Sbjct: 70 GYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQ 129 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + G + K I L G ++ V +GTT+E+ L + M Sbjct: 130 AAF--SDTIFVVGTRLLTKKGGDIKDFPDLKGKAVVVTSGTTSEILLHKLNEEQKMGMRI 187 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + + + R A+ D + L + +P I+ S+ + + Sbjct: 188 ISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKN 247 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 D E+ ++ T T+ E +K ++ K+ P Sbjct: 248 DPEFKKLMDDTIAQAQTSGE---AEKWFDKWFKNPIPP 282 >gi|187925335|ref|YP_001896977.1| extracellular solute-binding protein family 3 [Burkholderia phytofirmans PsJN] gi|187716529|gb|ACD17753.1| extracellular solute-binding protein family 3 [Burkholderia phytofirmans PsJN] Length = 297 Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 48/259 (18%), Positives = 94/259 (36%), Gaps = 9/259 (3%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 + + +A L IK G + G + F+ + G+ +F + A+ + Sbjct: 18 VGAHAQDAGTLKKIKDTGVISLGHRESSIPFSYYDDKQNVIGYSQEFALKVVEAVKQKLN 77 Query: 77 ----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 K++ P+ ++ R +Q+ +D+ +T R+ + G + Sbjct: 78 MPNLKVKLTPVTSQNRIPLVQNGTVDMECGSTTNNAERQQQAAF--SNTIFVIGTRLMTK 135 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 K GI + L G ++ AGTT+E L + +M + I + E R Sbjct: 136 KDSGIKDWADLKGKTVVTTAGTTSERLLRKMNQDKSMGMNIISAKDHGESFLTLSTGRAA 195 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 A+ D + L + ++ P + VI+ S I + D E+ +V A+ E Sbjct: 196 AFMMDDALLAGERAKSNNPGDFVIVGAPQSHEAYGCMIRKNDPEFKKVVDD---AIAKVE 252 Query: 253 ELGITQKNINQVSKDTTNP 271 G + + P Sbjct: 253 TSGEADAIYKKWFESPIPP 271 >gi|325525013|gb|EGD02925.1| extracellular solute-binding protein [Burkholderia sp. TJI49] Length = 297 Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 50/274 (18%), Positives = 99/274 (36%), Gaps = 9/274 (3%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 Y + + L + + L IK G + G + F+ N G+ Sbjct: 3 YHKAVLMVAALCAFASGAQAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGYSR 62 Query: 62 DFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 +F + A+ + +++ +P+ ++ R +Q+ +DI +T R+ Sbjct: 63 EFQMKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNAERQQQAAF- 121 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + G + K GI L G ++ AGTT+E L M + I + Sbjct: 122 -SDTIFVIGTRLMTKKDSGIKDFGDLKGKTVVTTAGTTSERLLRKMNNEKQMGMNIISAK 180 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + + R A+ D + L + +P E VI+ S+ + +GD ++ Sbjct: 181 DHGDSFNTLESGRAVAFMMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDADF 240 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 +V A+ E+ G K + ++ P Sbjct: 241 KKVVDD---AIAQVEKSGEAAKIYAKWFENPIPP 271 >gi|161615117|ref|YP_001589082.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167550797|ref|ZP_02344553.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|168231680|ref|ZP_02656738.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168264402|ref|ZP_02686375.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168465842|ref|ZP_02699724.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168820210|ref|ZP_02832210.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194443341|ref|YP_002039908.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194469057|ref|ZP_03075041.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197248012|ref|YP_002145641.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197262383|ref|ZP_03162457.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|198241916|ref|YP_002214653.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200389609|ref|ZP_03216220.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|238911616|ref|ZP_04655453.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|20141451|sp|Q9ZF60|GLTI_SALTY RecName: Full=Glutamate/aspartate periplasmic-binding protein; Flags: Precursor gi|161364481|gb|ABX68249.1| hypothetical protein SPAB_02884 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194402004|gb|ACF62226.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194455421|gb|EDX44260.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|195631794|gb|EDX50314.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197211715|gb|ACH49112.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197240638|gb|EDY23258.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197936432|gb|ACH73765.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199602054|gb|EDZ00600.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205324274|gb|EDZ12113.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205334029|gb|EDZ20793.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205343265|gb|EDZ30029.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205347107|gb|EDZ33738.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|312911697|dbj|BAJ35671.1| glutamate/aspartate ABC transporter substrate binding protein [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320084938|emb|CBY94727.1| Membrane-bound lytic murein transglycosylase F Murein lyase F; Flags: Precursor [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321226244|gb|EFX51295.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322613209|gb|EFY10152.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322621277|gb|EFY18134.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322623697|gb|EFY20535.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628969|gb|EFY25748.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631691|gb|EFY28445.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322637573|gb|EFY34275.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641913|gb|EFY38543.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322646757|gb|EFY43263.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322651458|gb|EFY47838.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653091|gb|EFY49425.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658811|gb|EFY55066.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664919|gb|EFY61112.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668921|gb|EFY65073.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322670573|gb|EFY66706.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675314|gb|EFY71390.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682215|gb|EFY78240.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322684956|gb|EFY80953.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323193986|gb|EFZ79188.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323197922|gb|EFZ83044.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202031|gb|EFZ87091.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207164|gb|EFZ92117.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210929|gb|EFZ95792.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323214309|gb|EFZ99060.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323219286|gb|EGA03777.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323225503|gb|EGA09733.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323231062|gb|EGA15178.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323234106|gb|EGA18195.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323238199|gb|EGA22257.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323242567|gb|EGA26591.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248456|gb|EGA32390.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251329|gb|EGA35201.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323259257|gb|EGA42900.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262142|gb|EGA45704.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323264846|gb|EGA48347.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323272317|gb|EGA55724.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 302 Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats. Identities = 50/278 (17%), Positives = 100/278 (35%), Gaps = 14/278 (5%) Query: 3 KDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 + ++L + + + + S L I K G + G V F+ Sbjct: 4 RKLTTAMLVMGLSAGLAHAEDGAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVV 63 Query: 58 GFDVDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ D+ A+ A+ +K ++ +P+ ++ R LQ+ D +T L R+ Sbjct: 64 GYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQ 123 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + G + K I L G ++ V +GTT+E+ L + M Sbjct: 124 AAF--SDTIFVVGTRLLTKKGGDIKDFPDLKGKAVVVTSGTTSEILLHKLNEEQKMGMRI 181 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + + + R A+ D + L + +P I+ S+ + + Sbjct: 182 ISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKN 241 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 D E+ ++ T T+ E +K ++ K+ P Sbjct: 242 DPEFKKLMDDTIAQAQTSGE---AEKWFDKWFKNPIPP 276 >gi|170703105|ref|ZP_02893924.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] gi|170131984|gb|EDT00493.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] Length = 297 Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats. Identities = 50/274 (18%), Positives = 100/274 (36%), Gaps = 9/274 (3%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 Y + + L + + L IK G + G + F+ N G+ Sbjct: 3 YHKAVLMVAALCAFASGAHAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGYSR 62 Query: 62 DFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 +F + A+ S +++ +P+ ++ R +Q+ +DI +T R+ Sbjct: 63 EFQMKIVDAVKKKLSLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNTERQQQAAF- 121 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + G + K G+ + L G ++ AGTT+E L + + I + Sbjct: 122 -SDTIFVIGTRLMTKKDSGVKDFADLKGKTVVTTAGTTSERLLRKMNNDKQLGMNIISAK 180 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + + R A+ D + L + +P E VI+ S+ + +GDT++ Sbjct: 181 DHGDSFNTLESGRAVAFMMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDTDF 240 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 +V A+ E+ G K + + P Sbjct: 241 KKVVDD---AISQVEKSGEAAKIYAKWFESPIPP 271 >gi|319792374|ref|YP_004154014.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] gi|315594837|gb|ADU35903.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] Length = 296 Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats. Identities = 45/268 (16%), Positives = 101/268 (37%), Gaps = 7/268 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M ++ + +LF + + A L I + G + V F+ + GF Sbjct: 1 MKLSVLMASMAAAVLFTATGAQAADTLAKIAESGKITLAYRESSVPFSYLDGPNKPIGFS 60 Query: 61 VDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 V+ A+ A+ +K + + + ++ R + + +D+ +T R + Sbjct: 61 VELSNAVVEAVKKKLNKPNLQVSLMAVTSQNRIPLITNGTVDLECGSTTNNTARGKDVAF 120 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 A ++ G + K I + L+ ++ GTT L + Y N+ ++ Sbjct: 121 AVN--HFYTGTRLLTKKSSKIKDYADLAKKTVASTTGTTNALVMRKYNTEKNLGMDIVLG 178 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + + R A+ D L+ L + P+++ ++ + + P A + + D Sbjct: 179 KDHADAFLLVESDRAVAFAMDDILLFGLIANSKNPADYEVVGESLQVEPYACMLPKDDPA 238 Query: 237 WYNIVSWTHYAMVTAEE-LGITQKNINQ 263 + +V T M+ + E + K Q Sbjct: 239 FKKLVDDTFIGMMKSGEFEKLYTKWFMQ 266 >gi|326318026|ref|YP_004235698.1| family 3 extracellular solute-binding protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374862|gb|ADX47131.1| extracellular solute-binding protein family 3 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 295 Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats. Identities = 56/297 (18%), Positives = 109/297 (36%), Gaps = 10/297 (3%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K S L + A L I G + V F+ + G GF V Sbjct: 1 MKTTLCSAALLACGLMAGAAAQADTLKKIADSGKITLAYRESSVPFSYLAGAGAPIGFSV 60 Query: 62 DFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 D A+ A+ K++ + ++ R + + +D+ +T R + A Sbjct: 61 DISNAVVDAVKKKLNKPDIKVELQAVTSQNRIPLVTNGTVDLECGSTTNNTARAKDVQFA 120 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 ++ G ++ K GI + + L+ ++ GTT + Y + +N+ ++ + Sbjct: 121 VN--YFYTGTRLLVKKSWGIRNYADLAKKTVASTTGTTNAQVIRKYNRDNNLDMDIVLGK 178 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + R A+ D L+ LK P+E ++ D + P A + + D ++ Sbjct: 179 DHNDSMLLVDTGRALAFAMDDILLFGLKANATNPAEWDVVGDALQVEPYACMLRKDDPQF 238 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKD 294 +V+ M+ + E +K N+ P Q LG+ S + + L D Sbjct: 239 QALVNGVIGGMMKSGE---FEKLYNKWFLSPIPPKGQA-LGLPMSKELRDNLTAQSD 291 >gi|257125151|ref|YP_003163265.1| extracellular solute-binding protein family 3 [Leptotrichia buccalis C-1013-b] gi|257049090|gb|ACV38274.1| extracellular solute-binding protein family 3 [Leptotrichia buccalis C-1013-b] Length = 282 Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats. Identities = 61/282 (21%), Positives = 114/282 (40%), Gaps = 19/282 (6%) Query: 1 MYKDF-----FVSILCLIILFFTSF-----STNASILGDIKKRGFLKCGINTGLVGFAEV 50 M K+F ++IL L + + S + IKK G ++ G+ F V Sbjct: 1 MKKNFERLVKIIAILVLGVFAISCGKGGKGSAEPGSIEAIKKAGKIRIGVFGDKPPFGFV 60 Query: 51 KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 NG +G+D+ + L+ + D +KI+++ L A R L S ++DI+ N T R Sbjct: 61 DENGKNQGYDIYLAKRLAKDLLGDENKIEFVTLEAANRVEYLLSNKVDIILANFTVTDER 120 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 + + A G + + I V +L G + V GTT E+ YF + Sbjct: 121 KQKVDFA--KPYMKVSLGIVSPEGAPIKDVKELKGKKLIVNKGTTAEI----YFTKNYPD 174 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 + +++ E A R A D + ++A + P V + + + +APA+ Sbjct: 175 IELLKYDQNTETFNALLDKRGAALAHDNTLVFAWAT--ENPGFVVDIKQLGEQDYIAPAV 232 Query: 231 IQGDTEWYNIVSWTHYAMVTAE-ELGITQKNINQVSKDTTNP 271 +G+ E + ++ A+ + + V + +P Sbjct: 233 RKGNKELLDWLNTEIDALTKEGFFEKAYKATLEPVYGNKVDP 274 >gi|319407433|emb|CBI81084.1| amino-acid ABC transporter binding protein [Bartonella sp. 1-1C] Length = 301 Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats. Identities = 57/274 (20%), Positives = 105/274 (38%), Gaps = 9/274 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + I + + L IK+ G + G+ G A NG + GF Sbjct: 1 MRKSFLIFIAAIFMGSTNIAHATNDTLEKIKRTGEITLGVRESS-GLAYALGNGKYTGFH 59 Query: 61 VDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 + + + I P K+ Y P+ ++ R L++ D +T R A Sbjct: 60 TEMAERIINDISKKIGQPIKVHYQPITSQNRIPLLKNGTYDFECGSTTNDSARSKEAAFA 119 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 TY + ++ K GI S+ L+G + GTT + + N+ + + + Sbjct: 120 --YTTYVESVKIVVKKNSGIQSIDDLNGKKVATTTGTTAVQLIRKNKRQKNIHFEVVNGK 177 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + + + R DA+ D S L A + PS+++IL +S P+A + D + Sbjct: 178 DHGDSFLSLESGRADAFVMDTSILSAHIAKSRNPSDYIILDTTLSVEPIACMLRLNDKNF 237 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 ++ + + G +K N+ + P Sbjct: 238 EQTINDSIVRQIN---DGSLEKLYNKWFMEPIPP 268 >gi|116750584|ref|YP_847271.1| extracellular solute-binding protein [Syntrophobacter fumaroxidans MPOB] gi|116699648|gb|ABK18836.1| extracellular solute-binding protein, family 3 [Syntrophobacter fumaroxidans MPOB] Length = 295 Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats. Identities = 60/276 (21%), Positives = 119/276 (43%), Gaps = 15/276 (5%) Query: 1 MYKDFFVSILCLIILFFTSFST----NASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M + F + ++L +T+ + S++ I++ G + G G V F + G W Sbjct: 1 MMRKLFGASAAALLLMWTANTACPAHAESVMDKIERTGKVNMGHREGAVPFGYMDEKGQW 60 Query: 57 KGFDVDFCRALSSAIFDD-PSKIQYL--PLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 GFD+D L+ A+ KI+Y+ P+N K R + + +D+ +T TL RE + Sbjct: 61 VGFDMDLGAELAKALETKFGKKIEYIKTPMNPKNRIPLVANGTVDVGIGSTTITLEREEA 120 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELT-LADYFKAH--NMK 170 + + + G ++ K I QL+G + V +G+T + L A + Sbjct: 121 VDFSL--PYFLTGTKLLVPKGSPIRDYRQLAGKKVGVGSGSTANIKGLQKAIDAKTIDPP 178 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 ++FE + + + DAY D + L ++ +P + ++ ++ P + Sbjct: 179 CEMVLFEDHAKGFLGLQQGKIDAYFTDEAMLAGMRAKAQKPDDWEVVAPFLTYEPYGFIL 238 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 + D++W + V+ T M + G +K N+ Sbjct: 239 PRDDSKWRDFVNATLIRMY---KDGTFEKIYNKWFG 271 >gi|161525883|ref|YP_001580895.1| extracellular solute-binding protein [Burkholderia multivorans ATCC 17616] gi|189349395|ref|YP_001945023.1| polar amino acid transporter substrate-binding protein [Burkholderia multivorans ATCC 17616] gi|221202318|ref|ZP_03575352.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia multivorans CGD2M] gi|221209132|ref|ZP_03582126.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia multivorans CGD2] gi|160343312|gb|ABX16398.1| extracellular solute-binding protein family 3 [Burkholderia multivorans ATCC 17616] gi|189333417|dbj|BAG42487.1| polar amino acid transport system substrate-binding protein [Burkholderia multivorans ATCC 17616] gi|221171036|gb|EEE03489.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia multivorans CGD2] gi|221177892|gb|EEE10305.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia multivorans CGD2M] Length = 297 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 50/274 (18%), Positives = 100/274 (36%), Gaps = 9/274 (3%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 Y + + L + + L IK G + G + F+ N G+ Sbjct: 3 YHKAVLMVAALCAFASGAQAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGYSR 62 Query: 62 DFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 +F + A+ + +++ +P+ ++ R +Q+ +DI +T R+ Sbjct: 63 EFQLKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNAERQQQAAF- 121 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + G + K G+ + L G ++ AGTT+E L M + I + Sbjct: 122 -SNTIFVIGTRLMTKKDSGVKDFADLKGKTVVTTAGTTSERLLRKMNNDKQMGMNIISAK 180 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + + R A+ D + L + +P E VI+ S+ + +GD E+ Sbjct: 181 DHGDSFNTLESGRAVAFMMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDPEF 240 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 +V A+ E+ G K + ++ P Sbjct: 241 KKVVDD---AIAQVEKSGEAAKIYAKWFENPIPP 271 >gi|149204302|ref|ZP_01881269.1| glutamate/aspartate ABC transporter, periplasmic substrate-binding protein [Roseovarius sp. TM1035] gi|149142187|gb|EDM30234.1| glutamate/aspartate ABC transporter, periplasmic substrate-binding protein [Roseovarius sp. TM1035] Length = 291 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 57/269 (21%), Positives = 109/269 (40%), Gaps = 7/269 (2%) Query: 2 YKDFFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + V+ L + ++ + L I G + G V F+ + +G+ Sbjct: 7 RRVLAVAALTTGLAPAALWAQDLTGTLAKINDSGEIVIGHRESSVPFSYLNDQQQPEGYS 66 Query: 61 VDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 +D C + + +++Y+P+N K R + + ID+ +T L R+ + Sbjct: 67 IDLCMKVVEEVEKTLGKDIEVRYVPVNPKTRIALMANGTIDLECGSTTNNLTRQQQVEY- 125 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 P+T+ G + K GISSV+ L G SI + GTT E + +A ++ + Sbjct: 126 -LPVTFVTGTKILTRKDSGISSVADLDGKSIALAQGTTNERAVKAAVEAQGLEVKILPVR 184 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E + R DAY+ D L+ L + P E ++ D +S P A + + D+ + Sbjct: 185 DHAEGMLSLETDRVDAYSTDHILLFGLIAKSKTPDEFAVVGDFLSFDPYALMVRRDDSAF 244 Query: 238 YNIVSWTHYAMVTAEELG-ITQKNINQVS 265 + + + E+ I K + + Sbjct: 245 ELVGKTALANVFRSGEINEIYSKWFDPMG 273 >gi|167036205|ref|YP_001671436.1| extracellular solute-binding protein [Pseudomonas putida GB-1] gi|166862693|gb|ABZ01101.1| extracellular solute-binding protein family 3 [Pseudomonas putida GB-1] Length = 290 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 64/284 (22%), Positives = 114/284 (40%), Gaps = 27/284 (9%) Query: 4 DFFVSILCLIILFFTSFS----------TNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 + L +L + + S L IK R L G+ T F V Sbjct: 8 KLLAPLFGLALLAGCNKADEPPKPAAASPATSYLETIKARDKLIVGVFTDKPPFGFVDEK 67 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G + GFD D R L+ + D +K++++ + R LQS ++D++ N T R+ + Sbjct: 68 GRYVGFDTDIGRRLAKDLLGDENKVEFVAVEPASRIPFLQSDKVDLILANMTVTPERKEA 127 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + I+ + + L+ +I V GTT ++ L ++ + Sbjct: 128 VDF--TNPNLRVAVQAIVADGSPVQKLDDLADKTIIVTTGTTADIWLT----KNHPDWKL 181 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS-PLAPAIIQ 232 + FE+ E A R DAY D L++ N + +LP+++ P+APA+ + Sbjct: 182 LKFEKNSESLQALATGRGDAYAQDNLILFSWAKQNPG---YRVLPELLGDEAPIAPAVKK 238 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK----DTTNPD 272 G+TE + W + + E K +Q + D T P+ Sbjct: 239 GNTELRD---WVNAELAKLGEEKFLLKLYDQYVRKELSDDTKPE 279 >gi|119896733|ref|YP_931946.1| putative glutamine-binding protein [Azoarcus sp. BH72] gi|119669146|emb|CAL93059.1| putative glutamine-binding protein [Azoarcus sp. BH72] Length = 299 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 52/271 (19%), Positives = 105/271 (38%), Gaps = 10/271 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M V LC + + A L IK G + G V F+ + A+ Sbjct: 1 MRTSLSVLALCFAAAGLAAPAHAAEPTGTLKKIKDSGTITVGHRESSVPFSYLDADQKPV 60 Query: 58 GFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ +D C + A+ D+ +++Y + ++ R +Q+ IDI +T ++ R+ Sbjct: 61 GYAMDLCAKVVDAVKDELKLPKLEVKYQAVTSQNRIPLMQNGTIDIECGSTTNSVQRQQQ 120 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 +G + + + K GI + L+G + GTT++ + K ++ Sbjct: 121 VGFSVN--YFVTSVRMAVRKDSGIKDIGDLNGKPVATTTGTTSDALIKQNEKGKSIDVRN 178 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + + + R A+ D L L ++ P+ + I+ + P + + Sbjct: 179 IYGKDHADSFLMVESGRAAAFVMDDILLAGLIASSKNPAAYEIVGPSLRDEPYGVMLRKD 238 Query: 234 DTEWYNIVSWTHYAMVTAEE-LGITQKNINQ 263 DTE+ +V ++ + E + K Q Sbjct: 239 DTEFKAVVDKALTGLMKSGEAEKMYTKWFTQ 269 >gi|120610617|ref|YP_970295.1| extracellular solute-binding protein [Acidovorax citrulli AAC00-1] gi|120589081|gb|ABM32521.1| amino acid ABC transporter substrate-binding protein, PAAT family [Acidovorax citrulli AAC00-1] Length = 295 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 56/297 (18%), Positives = 111/297 (37%), Gaps = 10/297 (3%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K S L + A L I G + V F+ + G GF V Sbjct: 1 MKTTLCSAALLACGMLAGAAAQADTLKKIADSGKITLAYRESSVPFSYLAGAGAPIGFSV 60 Query: 62 DFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 D A+ A+ +K ++ + ++ R + + +D+ +T R + A Sbjct: 61 DISNAVVDAVKKKLNKPDLKVELQAVTSQNRIPLVTNGTVDLECGSTTNNTARAKDVQFA 120 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 ++ G ++ K G+ + + L+ ++ GTT + Y + +N++ I+ + Sbjct: 121 VN--YFYTGTRLLVKKSSGVKNYADLAKKTVASTTGTTNAQVIRKYNRDNNLEMDIILGK 178 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + R A+ D L+ LK P+E ++ D + P A + + D ++ Sbjct: 179 DHNDSMLLVDTGRALAFAMDDILLFGLKANAVNPAEWDVVGDALQVEPYACMLRKDDPQF 238 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKD 294 +V+ M+ + E +K N+ P Q LG+ S + + L D Sbjct: 239 QALVNGVIGGMMKSGE---FEKLYNKWFLSPIAPKGQA-LGLPMSKELRDNLTAQSD 291 >gi|207856130|ref|YP_002242781.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|206707933|emb|CAR32222.1| ABC transporter periplasmic binding protein (glutamate/aspartate?) [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] Length = 308 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 50/278 (17%), Positives = 100/278 (35%), Gaps = 14/278 (5%) Query: 3 KDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 + ++L + + + + S L I K G + G V F+ Sbjct: 10 RKLTTAMLVMGLSAGLAHAEDGAPAAGSTLDRIAKNGVIVVGHRESSVPFSYYDNQQKVV 69 Query: 58 GFDVDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ D+ A+ A+ +K ++ +P+ ++ R LQ+ D +T L R+ Sbjct: 70 GYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQ 129 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + G + K I L G ++ V +GTT+E+ L + M Sbjct: 130 AAF--SDTIFVVGTRLLTKKGGDIKDFPDLKGKAVVVTSGTTSEILLHKLNEEQKMGMRI 187 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + + + R A+ D + L + +P I+ S+ + + Sbjct: 188 ISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKN 247 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 D E+ ++ T T+ E +K ++ K+ P Sbjct: 248 DPEFKKLMDDTIAQAQTSGE---AEKWFDKWFKNPIPP 282 >gi|221214523|ref|ZP_03587494.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia multivorans CGD1] gi|221165780|gb|EED98255.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia multivorans CGD1] Length = 378 Score = 216 bits (551), Expect = 4e-54, Method: Composition-based stats. Identities = 50/274 (18%), Positives = 100/274 (36%), Gaps = 9/274 (3%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 Y + + L + + L IK G + G + F+ N G+ Sbjct: 84 YHKAVLMVAALCAFASGAQAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGYSR 143 Query: 62 DFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 +F + A+ + +++ +P+ ++ R +Q+ +DI +T R+ Sbjct: 144 EFQLKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNAERQQQAAF- 202 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + G + K G+ + L G ++ AGTT+E L M + I + Sbjct: 203 -SNTIFVIGTRLMTKKDSGVKDFADLKGKTVVTTAGTTSERLLRKMNNDKQMGMNIISAK 261 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + + R A+ D + L + +P E VI+ S+ + +GD E+ Sbjct: 262 DHGDSFNTLESGRAVAFMMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDPEF 321 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 +V A+ E+ G K + ++ P Sbjct: 322 KKVVDD---AIAQVEKSGEAAKIYAKWFENPIPP 352 >gi|1813949|emb|CAA71822.1| cjaA [Campylobacter jejuni] Length = 279 Score = 216 bits (551), Expect = 4e-54, Method: Composition-based stats. Identities = 59/279 (21%), Positives = 113/279 (40%), Gaps = 16/279 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + +F + N+ L IK+ G ++ G+ F V G Sbjct: 1 MKKMLLSIFTTFVAVFLAACGGNSDSGASNSLERIKQDGVVRIGVFGDKPPFGYVDEKGV 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +G+D+ + ++ + D +K+Q++ + A R L+S ++DI+ N T R + Sbjct: 61 NQGYDIVLAKRIAKELLGDENKVQFVLVEAANRVEFLKSNKVDIILANFTQTPER--AEQ 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F G + + ISS+ L ++ + GTT + YF + Sbjct: 119 VDFCLPYMKVALGVAVPQDSNISSIEDLKDKTLLLNKGTTADA----YFTKEYPDIKTLK 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 +++ E AA R DA + D + L+A + P + + ++ +K +APA+ +GD Sbjct: 175 YDQNTETFAALIDQRGDALSHDNTLLFAWVK--EHPEFKMAIKELGNKDVIAPAVKKGDK 232 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 E + + E K ++ K DV+ Sbjct: 233 ELKEFID---NLITKLGEEQFFHKAYDETLKSHFGDDVK 268 >gi|168236652|ref|ZP_02661710.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194737342|ref|YP_002113776.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194712844|gb|ACF92065.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197290231|gb|EDY29587.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 302 Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats. Identities = 50/278 (17%), Positives = 100/278 (35%), Gaps = 14/278 (5%) Query: 3 KDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 + ++L + + + + S L I K G + G V F+ Sbjct: 4 RKLTTTMLVMGLSAGLAHAEDGAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVV 63 Query: 58 GFDVDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ D+ A+ A+ +K ++ +P+ ++ R LQ+ D +T L R+ Sbjct: 64 GYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQ 123 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + G + K I L G ++ V +GTT+E+ L + M Sbjct: 124 AAF--SDTIFVVGTRLLTKKGGDIKDFPDLKGKAVVVTSGTTSEILLHKLNEEQKMGMRI 181 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + + + R A+ D + L + +P I+ S+ + + Sbjct: 182 ISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKN 241 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 D E+ ++ T T+ E +K ++ K+ P Sbjct: 242 DPEFKKLMDDTIAQAQTSGE---AEKWFDKWFKNPIPP 276 >gi|115350618|ref|YP_772457.1| extracellular solute-binding protein [Burkholderia ambifaria AMMD] gi|115280606|gb|ABI86123.1| L-aspartate-binding protein / L-glutamate-binding protein [Burkholderia ambifaria AMMD] Length = 297 Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats. Identities = 49/274 (17%), Positives = 100/274 (36%), Gaps = 9/274 (3%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 Y + + L + + L IK G + G + F+ N G+ Sbjct: 3 YHKAVLMVAALCAFASGAHAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGYSR 62 Query: 62 DFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 +F + A+ + +++ +P+ ++ R +Q+ +DI +T R+ Sbjct: 63 EFQMKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNTERQQQAAF- 121 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + G + K G+ + L G ++ AGTT+E L + + I + Sbjct: 122 -SDTIFVIGTRLMTKKDSGVKDFADLKGKTVVTTAGTTSERLLRKMNNDKQLGMNIISAK 180 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + + R A+ D + L + +P E VI+ S+ + +GDT++ Sbjct: 181 DHGDSFNTLESGRAVAFMMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDTDF 240 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 +V A+ E+ G K + + P Sbjct: 241 KKVVDD---AISQVEKSGEAAKIYAKWFESPIPP 271 >gi|160880801|ref|YP_001559769.1| extracellular solute-binding protein [Clostridium phytofermentans ISDg] gi|160429467|gb|ABX43030.1| extracellular solute-binding protein family 3 [Clostridium phytofermentans ISDg] Length = 287 Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats. Identities = 71/288 (24%), Positives = 117/288 (40%), Gaps = 27/288 (9%) Query: 1 MYKDFFVSILCLIILFF------------TSFSTNASILGDIKKRGFLKCGINTGLVGFA 48 M K IL L ++ T + A L DIKK G +K G+ + F Sbjct: 1 MKKKILGVILSLTMVAGILTGCGQTKETNTGATAKARTLEDIKKDGKIKIGVFSDKNPFG 60 Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 V +NGD +G+DV F + ++ + KI+++ + A R L+S ++D+ N T Sbjct: 61 YVDSNGDIQGYDVYFAKRIAKDLLGSEDKIEFVYMEAANRVEYLKSAKVDVTLANFTVTK 120 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168 R + A G + I+ V QL ++ V GTT E YF ++ Sbjct: 121 DRSEQVDFAL--PYMKVALGVVSPDNALITDVDQLKDKTLIVVKGTTAET----YFMENH 174 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 + F+ +E A R DA++ D + + A L N V + I S +AP Sbjct: 175 SDIKLLKFDEYQEAYDALLDGRGDAFSTDNTEVLAWALQNK--GFSVGIESIGSIDAIAP 232 Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI----NQVSKDTTNPD 272 A+ +G+ E + W + + E K+ V D +P+ Sbjct: 233 AVQKGNKELLD---WINNEIKALAEEQFFHKDFEVTLKPVYGDNIDPE 277 >gi|16759617|ref|NP_455234.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29142610|ref|NP_805952.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|25296373|pir||AF0583 ABC transporter periplasmic binding protein (glutamate/ aspartate) STY0710 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16501909|emb|CAD05136.1| ABC transporter periplasmic binding protein (glutamate/aspartate?) [Salmonella enterica subsp. enterica serovar Typhi] gi|29138241|gb|AAO69812.1| ABC transporter periplasmic binding protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 308 Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats. Identities = 49/278 (17%), Positives = 99/278 (35%), Gaps = 14/278 (5%) Query: 3 KDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 + ++L + + + + S L I K G + G V F+ Sbjct: 10 RKLTTAMLVMGLSAGLAHAEDGAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVV 69 Query: 58 GFDVDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ D+ A+ + +K ++ +P+ ++ R LQ+ D +T L R+ Sbjct: 70 GYSQDYSNAIVEVVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQ 129 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + G + K I L G ++ V +GTT+E+ L + M Sbjct: 130 AAF--SDTIFVVGTRLLTKKGGDIKDFPDLKGKAVVVTSGTTSEILLHKLNEEQKMGMRI 187 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + + + R A+ D + L + +P I+ S+ + + Sbjct: 188 ISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKN 247 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 D E+ ++ T T+ E +K ++ K+ P Sbjct: 248 DPEFKKLMDDTIAQAQTSGE---AEKWFDKWFKNPIPP 282 >gi|161504171|ref|YP_001571283.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160865518|gb|ABX22141.1| hypothetical protein SARI_02277 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 308 Score = 216 bits (550), Expect = 5e-54, Method: Composition-based stats. Identities = 51/278 (18%), Positives = 100/278 (35%), Gaps = 14/278 (5%) Query: 3 KDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 + ++L + + + + S L I K G + G V F+ Sbjct: 10 RKLTTAMLVMGLSAGLAHAEDGAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVV 69 Query: 58 GFDVDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ D+ A+ A+ +K ++ LP+ ++ R LQ+ D +T L R+ Sbjct: 70 GYSQDYSNAIVEAVKKKLNKPDLQVKLLPITSQNRIPLLQNGTFDFECGSTTNNLERQKQ 129 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + G + K I L G ++ V +GTT+E+ L + M Sbjct: 130 AAF--SDTIFVVGTRLLTKKGGDIKDFPDLKGKAVVVTSGTTSEILLHKLNEEQKMGMRI 187 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + + + R A+ D + L + +P I+ S+ + + Sbjct: 188 ISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKN 247 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 D E+ ++ T T+ E +K ++ K+ P Sbjct: 248 DPEFKKLMDDTIAQAQTSGE---AEKWFDKWFKNPIPP 282 >gi|62179263|ref|YP_215680.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|224582500|ref|YP_002636298.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|62126896|gb|AAX64599.1| ABC superfamily (bind_prot), glutamate/aspartate transporter [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|224467027|gb|ACN44857.1| ABC transporter periplasmic binding protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|322713729|gb|EFZ05300.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 308 Score = 216 bits (550), Expect = 5e-54, Method: Composition-based stats. Identities = 50/278 (17%), Positives = 100/278 (35%), Gaps = 14/278 (5%) Query: 3 KDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 + ++L + + + + S L I K G + G V F+ Sbjct: 10 RKLTTAMLVMGLSAGLAHAEDGAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVV 69 Query: 58 GFDVDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ D+ A+ A+ +K ++ +P+ ++ R LQ+ D +T L R+ Sbjct: 70 GYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQ 129 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + G + K I L G ++ V +GTT+E+ L + M Sbjct: 130 AAF--SDTIFVVGTRLLTKKGGDIKDFPDLRGKAVVVTSGTTSEILLHKLNEEQKMGMRI 187 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + + + R A+ D + L + +P I+ S+ + + Sbjct: 188 ISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKN 247 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 D E+ ++ T T+ E +K ++ K+ P Sbjct: 248 DPEFKKLMDDTIAQAQTSGE---AEKWFDKWFKNPIPP 282 >gi|83950533|ref|ZP_00959266.1| glutamate/aspartate ABC transporter, periplasmic substrate-binding protein [Roseovarius nubinhibens ISM] gi|83838432|gb|EAP77728.1| glutamate/aspartate ABC transporter, periplasmic substrate-binding protein [Roseovarius nubinhibens ISM] Length = 287 Score = 216 bits (550), Expect = 5e-54, Method: Composition-based stats. Identities = 56/272 (20%), Positives = 107/272 (39%), Gaps = 6/272 (2%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K F + + + L I G + G V FA + N G+ +D Sbjct: 5 KSFMAAAIAASLAVPAIAQNAGGTLEKIAASGEIVLGHRESSVPFAYLDENQKPIGYSID 64 Query: 63 FCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 C + A+ I+Y+P+N K R + + ID+ +T L R+ + Sbjct: 65 LCHKIVEAVSAELGKEISIKYVPVNPKTRIALMANGTIDLECGSTTNNLTRQEQVEY--L 122 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 P T+ G ++ K GI+++ L G ++ + GTT E + + + + Sbjct: 123 PTTFITGTKLLVRKDGGIATIDDLDGKAVALAQGTTNERAVKAAIEEKGLDVKILPVRDH 182 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E + R DAY+ D L+ L + P + ++ D +S P A + + D+ + Sbjct: 183 AEGMLSLETDRVDAYSTDHILLFGLISKSKSPDDFAVVGDFLSFDPYALMVRRDDSAFEL 242 Query: 240 IVSWTHYAMVTAEELG-ITQKNINQVSKDTTN 270 + A+ + E+ I K + + + T+ Sbjct: 243 VGKKALAAVFRSGEINDIYAKWFDPLGVEQTD 274 >gi|213052442|ref|ZP_03345320.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213425078|ref|ZP_03357828.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] Length = 302 Score = 216 bits (550), Expect = 5e-54, Method: Composition-based stats. Identities = 49/278 (17%), Positives = 99/278 (35%), Gaps = 14/278 (5%) Query: 3 KDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 + ++L + + + + S L I K G + G V F+ Sbjct: 4 RKLTTAMLVMGLSAGLAHAEDGAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVV 63 Query: 58 GFDVDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ D+ A+ + +K ++ +P+ ++ R LQ+ D +T L R+ Sbjct: 64 GYSQDYSNAIVEVVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQ 123 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + G + K I L G ++ V +GTT+E+ L + M Sbjct: 124 AAF--SDTIFVVGTRLLTKKGGDIKDFPDLKGKAVVVTSGTTSEILLHKLNEEQKMGMRI 181 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + + + R A+ D + L + +P I+ S+ + + Sbjct: 182 ISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKN 241 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 D E+ ++ T T+ E +K ++ K+ P Sbjct: 242 DPEFKKLMDDTIAQAQTSGE---AEKWFDKWFKNPIPP 276 >gi|170695393|ref|ZP_02886539.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] gi|170139793|gb|EDT07975.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] Length = 297 Score = 215 bits (549), Expect = 5e-54, Method: Composition-based stats. Identities = 47/259 (18%), Positives = 98/259 (37%), Gaps = 9/259 (3%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 + + +A L IK G + G + F+ + G+ +F + A+ + Sbjct: 18 VGAHAQDAGTLKKIKDTGVIALGHRESSIPFSYYDDKQEVIGYSQEFALKVVEAVKQKLN 77 Query: 77 ----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 K++ +P+ ++ R +Q+ +D+ +T R+ + + G + Sbjct: 78 APNLKVKLIPVTSQNRIPLVQNGTVDMECGSTTNNAERQQQVAF--SNTIFVIGTRLMTK 135 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 K GI + L G ++ AGTT+E L + ++ + I + E R Sbjct: 136 KDSGIKDWADLKGKTVVTTAGTTSERLLRKMNQDKSLGMNIISAKDHGESFLTLSTGRAA 195 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 A+ D + L + ++ P++ VI+ S + + D E+ +V A+ E Sbjct: 196 AFMMDDALLAGERAKSNTPNDFVIVGAPQSHEAYGCMLRKNDPEFKKVVDD---AIAKVE 252 Query: 253 ELGITQKNINQVSKDTTNP 271 G K + + P Sbjct: 253 TSGEADKIYKKWFESPIPP 271 >gi|322418597|ref|YP_004197820.1| family 3 extracellular solute-binding protein [Geobacter sp. M18] gi|320124984|gb|ADW12544.1| extracellular solute-binding protein family 3 [Geobacter sp. M18] Length = 273 Score = 215 bits (549), Expect = 5e-54, Method: Composition-based stats. Identities = 58/278 (20%), Positives = 106/278 (38%), Gaps = 17/278 (6%) Query: 2 YKDFFVSILCLIILFF---TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWK 57 K ++ L +L + A L ++KK+G L G+ L F V + Sbjct: 1 MKRLAAVVMGLALLGSFGKAMAAAPADTLAEVKKKGVLVAGVKDSLPPFGYVDEKSREIV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G+DVDF +A++ + K++ P+ + R L IDI++ R +G + Sbjct: 61 GYDVDFVKAIAKKLG---VKVELKPVTSASRMPQLTEGNIDIIAATMTKNPERAKQIGFS 117 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + GQ FI K K + + L G I G+T+E + + F+ Sbjct: 118 H--TYFATGQKFITVKGK-VKGLKDLQGKKIGTAKGSTSEQNVKTALPTA----TVLAFD 170 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + A + + A T D + L + ++ I IS P + + D ++ Sbjct: 171 DYPQAFLALQQGKVAAVTTDEAILAGILAKAPNKAKFEIPNLQISNEPYGLGMRKDDAKF 230 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 V T + E+ G +K + T+ ++R Sbjct: 231 IAFVDKTI---LEMEKSGEARKIFEKWFGKGTDFQLKR 265 >gi|56420512|ref|YP_147830.1| glutamine ABC transporter glutamine-binding protein [Geobacillus kaustophilus HTA426] gi|261420185|ref|YP_003253867.1| extracellular solute-binding protein family 3 [Geobacillus sp. Y412MC61] gi|297529846|ref|YP_003671121.1| extracellular solute-binding protein family 3 [Geobacillus sp. C56-T3] gi|319766997|ref|YP_004132498.1| extracellular solute-binding protein family 3 [Geobacillus sp. Y412MC52] gi|56380354|dbj|BAD76262.1| glutamine ABC transporter (glutamine-binding protein) [Geobacillus kaustophilus HTA426] gi|261376642|gb|ACX79385.1| extracellular solute-binding protein family 3 [Geobacillus sp. Y412MC61] gi|297253098|gb|ADI26544.1| extracellular solute-binding protein family 3 [Geobacillus sp. C56-T3] gi|317111863|gb|ADU94355.1| extracellular solute-binding protein family 3 [Geobacillus sp. Y412MC52] Length = 281 Score = 215 bits (549), Expect = 6e-54, Method: Composition-based stats. Identities = 62/284 (21%), Positives = 114/284 (40%), Gaps = 32/284 (11%) Query: 1 MYKDF--------FVSILCLIIL-----------FFTSFSTNA-SILGDIKKRGFLKCGI 40 M K ++L + L +S + A + L IK+RG L G+ Sbjct: 1 MRKKAWKWWIAVALTALLSAVALTGCSTTDKGEGGTSSETAKATNTLEKIKQRGKLIVGV 60 Query: 41 NTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99 L F G +GFD+D + L+ I D +KI+ + +K R L + +ID Sbjct: 61 KYDLNLFGLKNPETGKVEGFDIDIAKGLAKKILGDENKIELKEVTSKTRIPMLNNGEIDA 120 Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTEL 158 + T R+ + + + GQ ++ K I+SV L G ++ G+T+ Sbjct: 121 IIATMTITEERKKEVDF--SDVYFMAGQSLLVKKDSPINSVKDLKKGMTVLTAKGSTSAE 178 Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218 + + + + FE E A +A + DA T D + L+ + + + +L Sbjct: 179 NIRKVAP----QVNVLEFENYAEAFTALKAGQGDALTTDNALLWGMAKQDPN---YRVLD 231 Query: 219 DIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNI 261 + ++ P A+ +GD E +++ + E I +K I Sbjct: 232 ETFTEEPYGIAVRKGDKELLQVINEYLKEIKENGEYDKIYEKWI 275 >gi|73537816|ref|YP_298183.1| extracellular solute-binding protein [Ralstonia eutropha JMP134] gi|72121153|gb|AAZ63339.1| extracellular solute-binding protein, family 3 [Ralstonia eutropha JMP134] Length = 311 Score = 215 bits (549), Expect = 6e-54, Method: Composition-based stats. Identities = 52/263 (19%), Positives = 97/263 (36%), Gaps = 8/263 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 +++ +L + L + +L I+ G + G + F+ G G+ Sbjct: 18 LFRPLTALLLAVATLSPLGARAQSPVLDKIRDSGTIVLGYRESALPFSFADDKGQPAGYA 77 Query: 61 VDFCRALSSA----IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 VD C ++ A + K+++LPL + RF A+ + +D+ +L R+ + Sbjct: 78 VDLCLRVAEAARQKLGLKDIKVRWLPLTPQNRFPAVVNGLVDLDCAPNTNSLERQKQVAF 137 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + Y ++ GI S L G ++ AG+T + + Y + Sbjct: 138 SVS--HYVSTVRMLVRADSGIQSFEDLRGKTVVTSAGSTGDRHVRRL--KQQYGYRDVYA 193 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + E + R A+ D L L+ PS+ VI+ +S A + + D E Sbjct: 194 KDHGESFLLLESGRAQAFVMDDVLLAGLRARAKDPSQFVIVGPALSTEQNALMMSKADPE 253 Query: 237 WYNIVSWTHYAMVTAEELGITQK 259 W V T + QK Sbjct: 254 WKRFVDQTLAGTFAGTGITTLQK 276 >gi|15600275|ref|NP_253769.1| binding protein component of ABC transporter [Pseudomonas aeruginosa PAO1] gi|116053228|ref|YP_793551.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa UCBPP-PA14] gi|9951376|gb|AAG08467.1|AE004921_4 probable binding protein component of ABC transporter [Pseudomonas aeruginosa PAO1] gi|115588449|gb|ABJ14464.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa UCBPP-PA14] Length = 299 Score = 215 bits (549), Expect = 6e-54, Method: Composition-based stats. Identities = 54/271 (19%), Positives = 111/271 (40%), Gaps = 11/271 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTN---ASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWK 57 K S L + + + L + G + G V F+ + +G Sbjct: 1 MKTLVSSTFALSLSLAIGAAQAEELSGTLKKVADNGTITLGYRDASVPFSYLGDNSGQPM 60 Query: 58 GFDVDFCRALSSAI---FDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ V+ + + P K++Y + ++ R +Q+ +D+ +T T R+ Sbjct: 61 GYSVELAGKVVERLKSTLGKPELKVKYNLVTSQTRIPLVQNGTVDLECGSTGVTAERQKQ 120 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + ++ I Y GQ + K GI+ L G ++ AGTT E L +Y H + + Sbjct: 121 VAFSYGFI-YVKGQ-LLTRKDSGIAHFDDLKGKNVVTTAGTTNERYLKNYNAEHKLGMNV 178 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + + E ++ R A+ D + LY + +P + V++ + S+ + + + Sbjct: 179 VSAKDHGEAFQMLQSGRAVAFYMDDALLYGERAKARQPHDWVVVGEPQSREIYSCMVRKD 238 Query: 234 DTEWYNIVSWTHYAMVTAEEL-GITQKNINQ 263 D ++ +V+ T + + E+ GI Q+ Q Sbjct: 239 DPQFLALVNETLAGLYRSGEIQGIYQRWFQQ 269 >gi|57168852|ref|ZP_00367982.1| ABC transporter, periplasmic substrate-binding protein [Campylobacter coli RM2228] gi|57019688|gb|EAL56374.1| ABC transporter, periplasmic substrate-binding protein [Campylobacter coli RM2228] Length = 279 Score = 215 bits (549), Expect = 6e-54, Method: Composition-based stats. Identities = 59/279 (21%), Positives = 113/279 (40%), Gaps = 16/279 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + +F + N+ L IK+ G ++ G+ F V G Sbjct: 1 MKKMLLSIFTTFVAVFLAACGGNSDSGASNSLERIKQDGVVRIGVFGDKPPFGYVDEKGV 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +G+D+ + ++ + D +K+Q++ + A R L+S ++DI+ N T R + Sbjct: 61 NQGYDIVLAKRIAKELLGDENKVQFVLVEAANRVEFLKSNKVDIILANFTQTPER--AEQ 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F G + + ISS+ L ++ + GTT + YF + Sbjct: 119 VDFCLPYMKVALGVAVPQDSNISSIEDLKDKTLLLNKGTTADA----YFTKEYPDIKTLK 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 +++ E AA R DA + D + L+A + P + + ++ +K +APA+ +GD Sbjct: 175 YDQNTETFAALIDQRGDALSHDNTLLFAWVK--EHPEFKMAIKELGNKDVIAPAVKKGDK 232 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 E + + E K ++ K DV+ Sbjct: 233 ELKEFID---NLITKLGEEQFFHKVYDETLKSHFGDDVK 268 >gi|311280448|ref|YP_003942679.1| extracellular solute-binding protein family 3 [Enterobacter cloacae SCF1] gi|308749643|gb|ADO49395.1| extracellular solute-binding protein family 3 [Enterobacter cloacae SCF1] Length = 303 Score = 215 bits (549), Expect = 7e-54, Method: Composition-based stats. Identities = 52/251 (20%), Positives = 93/251 (37%), Gaps = 9/251 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQY 80 S L I K G + G V F+ G+ D+ A+ A+ +K I+ Sbjct: 32 STLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQIKL 91 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 LP+ ++ R LQ+ D +T L R+ + G ++ K I Sbjct: 92 LPVTSQNRIPLLQNGTFDFECGSTTNNLERQQQASF--SDTIFVIGTRLLVKKGSPIKDF 149 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L ++ V +GTT+E+ L M I + + + R A+ D + Sbjct: 150 PDLKDKTVVVTSGTTSEVLLHKLNDEKQMNMRIISAKDHGDSFRTLESGRAVAFMMDDAL 209 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L + +P + VI+ SK + + D E+ ++ T T+ E +K Sbjct: 210 LAGERAKAKKPDDWVIVGTPQSKEAYGCMLRKNDPEFKKLMDDTISQAQTSGE---AEKW 266 Query: 261 INQVSKDTTNP 271 ++ K+ P Sbjct: 267 FDKWFKNPIPP 277 >gi|167586129|ref|ZP_02378517.1| extracellular solute-binding protein, family 3 [Burkholderia ubonensis Bu] Length = 297 Score = 215 bits (548), Expect = 7e-54, Method: Composition-based stats. Identities = 50/274 (18%), Positives = 99/274 (36%), Gaps = 9/274 (3%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 Y + L + + L IK G + G + F+ N G+ Sbjct: 3 YHKAILMAAALCAFASGAHAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGYSR 62 Query: 62 DFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 DF + A+ + +++ +P+ ++ R +Q+ +DI +T R+ Sbjct: 63 DFQLKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNTERQQQAAF- 121 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + G + K GI + L G ++ AGTT+E L + + I + Sbjct: 122 -SDTIFVIGTRLMTKKDSGIKDFADLKGKTVVTTAGTTSERLLRKMNNDKQLGMNIISAK 180 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + + R A+ D + L + +P E VI+ S+ + +GD ++ Sbjct: 181 DHGDSFNTLESGRAVAFMMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDADF 240 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 +V A+ E+ G K + ++ P Sbjct: 241 KKVVDD---AISQVEKSGEAAKIYAKWFENPIPP 271 >gi|156934833|ref|YP_001438749.1| glutamate and aspartate transporter subunit [Cronobacter sakazakii ATCC BAA-894] gi|156533087|gb|ABU77913.1| hypothetical protein ESA_02680 [Cronobacter sakazakii ATCC BAA-894] Length = 316 Score = 215 bits (548), Expect = 7e-54, Method: Composition-based stats. Identities = 53/277 (19%), Positives = 102/277 (36%), Gaps = 13/277 (4%) Query: 3 KDFFVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 + ++L + + + + +AS L IK G + G V F+ G Sbjct: 19 RKLTAAMLVMGLSAGLAHAEDASSGQSTLDKIKANGVIVVGHRESSVPFSYYDNQQKVVG 78 Query: 59 FDVDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + D+ A+ A+ +K ++ +P+ ++ R LQ+ D +T L R+ Sbjct: 79 YSQDYSNAIVEAVKKQLNKPDLQVKMIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQA 138 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + G ++ K I L G ++ V +GTT+E+ L M I Sbjct: 139 AF--SDTIFVVGTRLLVKKGGPIKDFPDLKGKAVVVTSGTTSEVLLHKLNDEKKMDMRII 196 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + + R A+ D + L + +P I+ SK + +GD Sbjct: 197 SAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGTPQSKEAYGCMLRKGD 256 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + +V T A+ G +K ++ K+ P Sbjct: 257 ESFKKLVDETI---AKAQTSGDAEKWFDKWFKNPIPP 290 >gi|294637494|ref|ZP_06715780.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Edwardsiella tarda ATCC 23685] gi|291089326|gb|EFE21887.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Edwardsiella tarda ATCC 23685] Length = 300 Score = 215 bits (548), Expect = 8e-54, Method: Composition-based stats. Identities = 51/272 (18%), Positives = 100/272 (36%), Gaps = 11/272 (4%) Query: 1 MYKDFFVSILCLIILFFTS----FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M+K L + L + + +++ L IK+ G + G V F+ Sbjct: 1 MHKSVLTMALLALSLPLYAVADNGAADSATLAKIKQNGVIVVGHRESSVPFSYYDNKQQV 60 Query: 57 KGFDVDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G+ D+ A+ +A+ +++ LP+ ++ R LQ+ D +T R+ Sbjct: 61 VGYSQDYSNAIVAAVKKQLGLPNLQVKLLPITSQNRIPLLQNGTYDFECGSTTHNAERQQ 120 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + + G + K G+ L+G + V +GTT+E+ L + MK Sbjct: 121 QVAF--SNTLFIVGTRLLTAKDSGVHDFRDLAGKPVVVTSGTTSEILLNRMNEKEGMKMR 178 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 I + + + R A+ D + L + +P VI+ S + + Sbjct: 179 IISAKDHGDAFRTLESGRAVAFMMDDALLAGERAKAKQPERWVIVGTPQSYEAYGCMLRK 238 Query: 233 GDTEWYNIVSWTHYAMVTAEELGI-TQKNINQ 263 D + +V T T+ + Q+ Q Sbjct: 239 DDPAFKKLVDDTIAQAQTSGQAASGYQRWFEQ 270 >gi|212712951|ref|ZP_03321079.1| hypothetical protein PROVALCAL_04049 [Providencia alcalifaciens DSM 30120] gi|212684429|gb|EEB43957.1| hypothetical protein PROVALCAL_04049 [Providencia alcalifaciens DSM 30120] Length = 297 Score = 215 bits (548), Expect = 8e-54, Method: Composition-based stats. Identities = 50/272 (18%), Positives = 101/272 (37%), Gaps = 9/272 (3%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 ++++ L L IK G + G V F+ N G+ D+ Sbjct: 5 KLVLTMMLLGATCAVQAEELNGTLKKIKDNGVIVVGHRESSVPFSYYDNNQKVVGYSQDY 64 Query: 64 CRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 + A+ + +++ +P+ ++ R LQ+ D +T L R+ Sbjct: 65 SNLIVDAVKKKLNMPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQAAF--S 122 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G + K GI + L+G ++ V +GTT+E+ L NMK I + Sbjct: 123 NTIFVVGTRLLAKKDSGIKDFADLAGKNVVVTSGTTSEVILNKLNDEKNMKMRIISAKDH 182 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + + R A+ D + L + +P I+ ++ + + D ++ Sbjct: 183 GDSFRTLESGRAVAFMMDDALLAGERAKAKQPDIWEIVAKPQTEEAYGCMLRKDDPQFKA 242 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 +V T TA++ G +K+ ++ P Sbjct: 243 LVDDTIS---TAQKSGAAEKSFDRWFNQPIPP 271 >gi|225025468|ref|ZP_03714660.1| hypothetical protein EIKCOROL_02366 [Eikenella corrodens ATCC 23834] gi|224941752|gb|EEG22961.1| hypothetical protein EIKCOROL_02366 [Eikenella corrodens ATCC 23834] Length = 297 Score = 215 bits (548), Expect = 9e-54, Method: Composition-based stats. Identities = 62/244 (25%), Positives = 110/244 (45%), Gaps = 9/244 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L IK+RG ++ G+ F V ANG +GFDV+ + L++ + P K++++ A Sbjct: 56 LAKIKERGVIRIGVFGDKPPFGYVDANGKSQGFDVEIAKYLANDLLGSPDKVEFVLTEAA 115 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 R ++S ++D++ N T R + A G + K I+ +SQL G Sbjct: 116 NRVEYVRSGKVDLILANFTQTPERAEVVDFAS--PYMNVALGVVSPKGAPITDLSQLEGK 173 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 ++ V GTT + YF ++ + + F++ E A + R A D + L+A Sbjct: 174 TLLVNKGTTADA----YFTKNHPNINLLKFDQNTETFDALKDGRGVALAHDNALLWAWAK 229 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVS 265 + P+ V++ +I +APA+ +GD N V+ A+ L +K + V Sbjct: 230 --ENPNFEVVIGNIGPAEHIAPAVRKGDQSLLNWVNQEIAAIKQDGRLHAAYEKTLRPVY 287 Query: 266 KDTT 269 D Sbjct: 288 GDKE 291 >gi|85704883|ref|ZP_01035984.1| glutamate/aspartate ABC transporter, periplasmic substrate-binding protein [Roseovarius sp. 217] gi|85670701|gb|EAQ25561.1| glutamate/aspartate ABC transporter, periplasmic substrate-binding protein [Roseovarius sp. 217] Length = 291 Score = 215 bits (547), Expect = 9e-54, Method: Composition-based stats. Identities = 57/267 (21%), Positives = 106/267 (39%), Gaps = 13/267 (4%) Query: 10 LCLIILFFTSFSTNA-------SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + I T + A L I G + G V F+ + +G+ +D Sbjct: 9 MLAIAALTTGLAPAALWGQDLTGTLAKINDSGEIVLGHRESSVPFSYLNDQQQPEGYSID 68 Query: 63 FCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 C + + +++Y+P+N K R + + ID+ +T L R+ + Sbjct: 69 LCMKVVEEVEKTLGKDIEVRYVPVNPKTRIALMANGTIDLECGSTTNNLTRQQQVEY--L 126 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 P+T+ G + K+ GI+SV+ L G SI + GTT E + +A + + Sbjct: 127 PVTFVTGTKILTRKESGITSVADLDGKSIALAQGTTNERAIKAVVEAQGLDVKILPVRDH 186 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E + R DAY+ D L+ L + P E ++ D +S P A + + D+ + Sbjct: 187 AEGMLSLETDRVDAYSTDHILLHGLIAKSKTPDEFAVVGDFLSFDPYALMVRRDDSAFEL 246 Query: 240 IVSWTHYAMVTAEELG-ITQKNINQVS 265 + + + E+ I K + + Sbjct: 247 VGKTALANVFRSGEINEIYSKWFDPMG 273 >gi|293397296|ref|ZP_06641568.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, binding protein [Serratia odorifera DSM 4582] gi|291420214|gb|EFE93471.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, binding protein [Serratia odorifera DSM 4582] Length = 298 Score = 215 bits (547), Expect = 9e-54, Method: Composition-based stats. Identities = 52/279 (18%), Positives = 99/279 (35%), Gaps = 17/279 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K L L+++ S +A L IK G + G V F+ Sbjct: 3 MRK----LALSLLLIGMASSVAHAEELTGTLKKIKDNGVIVVGHRESSVPFSYYDNQRKV 58 Query: 57 KGFDVDFCRALSSAIFD----DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G+ D+ + AI +++ +P+ ++ R LQ+ D +T + R+ Sbjct: 59 VGYSQDYSNQIVEAIKKQLNAPDLQVKMMPITSQNRIPLLQNGTFDFECGSTTNNIERQK 118 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + G ++ K + L+G ++ V +GTT+E+ L M Sbjct: 119 QAAF--SDTIFVVGTRLLVKKGSEVKDFKDLAGKAVVVTSGTTSEVLLNKLNDKDKMNMR 176 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 I + + + R A+ D + L + +P + I+ SK + + Sbjct: 177 IISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDQWQIIGTAQSKEAYGCMLRK 236 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 D ++ +V T T+ E K ++ K P Sbjct: 237 DDPQFKKLVDDTIAQAQTSGE---AAKWFDKWFKQPIPP 272 >gi|146310840|ref|YP_001175914.1| glutamate and aspartate transporter subunit [Enterobacter sp. 638] gi|145317716|gb|ABP59863.1| L-glutamate-binding protein / L-aspartate-binding protein [Enterobacter sp. 638] Length = 301 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 50/277 (18%), Positives = 100/277 (36%), Gaps = 13/277 (4%) Query: 3 KDFFVSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 + ++L + + + S L I K G + G V F+ G Sbjct: 4 RKLATAMLVMGMSASVVHAEDAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNTQKVVG 63 Query: 59 FDVDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + D+ A+ A+ +K ++ +P+ ++ R LQ+ D +T L R+ Sbjct: 64 YSQDYSNAIVEAVKKKLNKPDLEVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQA 123 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + G + K I + L G ++ V +GTT+E+ L + M I Sbjct: 124 AF--SDTIFVVGTRLLTKKGGDIKDFADLKGKAVVVTSGTTSEVLLHKLNEEKKMDMRII 181 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + + R A+ D + L + +P I+ SK + + D Sbjct: 182 SAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGTAQSKEAYGCMLRKDD 241 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 ++ ++ T T+ E +K ++ K+ P Sbjct: 242 ADFKKLIDDTIAKTQTSGE---AEKWFDKWFKNPIPP 275 >gi|254246322|ref|ZP_04939643.1| Extracellular solute-binding protein, family 12 [Burkholderia cenocepacia PC184] gi|124871098|gb|EAY62814.1| Extracellular solute-binding protein, family 12 [Burkholderia cenocepacia PC184] Length = 300 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 52/279 (18%), Positives = 105/279 (37%), Gaps = 13/279 (4%) Query: 1 MYK-DFFVSILCLIILFFTSFSTNAS---ILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K + ++L L + +A L IK G + G + F+ N Sbjct: 1 MTKMKYHKAVLMAAALCAFASGAHAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQV 60 Query: 57 KGFDVDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G+ +F + A+ + +++ +P+ ++ R +Q+ +DI +T L R+ Sbjct: 61 VGYSREFQLKIVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLERQQ 120 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + G + K G+ + L G ++ AGTT+E L + + Sbjct: 121 QAAF--SDTIFVIGTRLMTKKDSGVKDFADLKGKTVVTTAGTTSERLLRKMNNDKQLGMN 178 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 I + + + R A+ D + L + +P E VI+ S+ + + Sbjct: 179 IISAKDHGDSFNTLESGRAVAFMMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRK 238 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 GD ++ +V A+ E+ G K + ++ P Sbjct: 239 GDADFKKVVDD---AISQVEKSGEAAKIYAKWFENPIPP 274 >gi|188534469|ref|YP_001908266.1| glutamate and aspartate transporter subunit [Erwinia tasmaniensis Et1/99] gi|188029511|emb|CAO97388.1| Glutamate/aspartate periplasmic-binding protein [Erwinia tasmaniensis Et1/99] Length = 309 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 60/287 (20%), Positives = 103/287 (35%), Gaps = 24/287 (8%) Query: 4 DFFVSILCLIILFFTSFSTNAS---------------ILGDIKKRGFLKCGINTGLVGFA 48 F LCL + S +A L I K G + G V F+ Sbjct: 2 KFRKLGLCLALASAASGIAHADDTKVQAVADAQQQNSTLEKIAKTGVIVVGHRESSVPFS 61 Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNT 104 G+ D+ A+ +AI +K ++ LP+ ++ R LQ+ D +T Sbjct: 62 YYDNQQKVVGYSQDYSNAIVAAIKTKLNKPDLQVKMLPVTSQNRIPLLQNGTYDFECGST 121 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164 L R+ + + G ++ K I + L G ++ V +GTT+E+ L Sbjct: 122 TNNLERQKQASFSNSI--FVVGTRLLVKKGGAIKDFADLKGKTVVVTSGTTSEILLNKLN 179 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 M I + + + R A+ D + L + +PS+ IL S Sbjct: 180 DEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPSDWEILGTPQSHE 239 Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + +GD E+ ++ T V A+ G K ++ K P Sbjct: 240 AYGCMLRKGDNEFKKLMDDTI---VQAQTSGEAAKWFDKWFKQPIPP 283 >gi|237665766|ref|ZP_04525754.1| extracellular solute-binding protein, family 3 [Clostridium butyricum E4 str. BoNT E BL5262] gi|237658713|gb|EEP56265.1| extracellular solute-binding protein, family 3 [Clostridium butyricum E4 str. BoNT E BL5262] Length = 286 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 68/294 (23%), Positives = 121/294 (41%), Gaps = 23/294 (7%) Query: 1 MYK-DFFVSILCLIILFFTSFSTNA-----------SILGDIKKRGFLKCGINTGLVGFA 48 M K +IL + L TS + S + IK+RG +K G+ + F Sbjct: 1 MKKLRKLAAILVVGSLALTSLTGCGTVADKSGQENKSSIEAIKQRGTIKIGVFSDKAPFG 60 Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 V +NG+ +GFDV + + + D SK +++ ++A R L+S ++D++ N T Sbjct: 61 YVDSNGENQGFDVYIAKRFAKDLLGDESKAEFVLVDAASRVAYLESNKVDMIMANFTVTD 120 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168 R+ + A G + + I S +L G I V GTT E + + + Sbjct: 121 DRKEKVDFAN--PYMKVSLGIVSPESAPIKSADELKGKKIIVAKGTTAETFMTENYP--- 175 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 + +E+ EI A + R D D + + A D P V + + S+ +AP Sbjct: 176 -DVELVKYEQYSEIFQALKDGRGDGILSDNTEVIAWAK--DNPGFTVGVSTLGSQDTIAP 232 Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKS 282 A+ +G+TE W + + T + K + K + + L ++ Sbjct: 233 AVAKGNTELQE---WINTELETLGKENFVHKAYEETLKSVYGDEFEESLVVEGG 283 >gi|261245937|emb|CBG23739.1| ABC transporter periplasmic binding protein (glutamate/aspartate?) [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267992399|gb|ACY87284.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157265|emb|CBW16753.1| ABC transporter periplasmic binding protein (glutamate/aspartate?) [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|323128982|gb|ADX16412.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] Length = 308 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 49/278 (17%), Positives = 99/278 (35%), Gaps = 14/278 (5%) Query: 3 KDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 + ++L + + + + S L I K G + G V F+ Sbjct: 10 RKLTTAMLVMGLSAGLAHAEDGAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVV 69 Query: 58 GFDVDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ D+ A+ A+ +K ++ +P+ ++ R LQ+ D +T L R+ Sbjct: 70 GYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQ 129 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + G + K I L G ++ V +GTT+E+ L + M Sbjct: 130 AAF--SDTIFVVGTRLLTKKGGDIKDFPDLKGKAVVVTSGTTSEILLHKLNEEQKMGMRI 187 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + + + R A+ D + L + +P I+ S+ + + Sbjct: 188 ISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKN 247 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 E+ ++ T T+ E +K ++ K+ P Sbjct: 248 APEFKKLMDDTIAQAQTSGE---AEKWFDKWFKNPIPP 282 >gi|206561695|ref|YP_002232460.1| periplasmic glutamate/aspartate-binding protein [Burkholderia cenocepacia J2315] gi|198037737|emb|CAR53681.1| periplasmic glutamate/aspartate-binding protein [Burkholderia cenocepacia J2315] Length = 297 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 48/272 (17%), Positives = 101/272 (37%), Gaps = 9/272 (3%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 +++ L + + L IK G + G + F+ N G+ +F Sbjct: 5 KAVLTVAALCAFASGAHAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGYSREF 64 Query: 64 CRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 + A+ + +++ +P+ ++ R +Q+ +DI +T L R+ Sbjct: 65 QLKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLERQQQAAF--S 122 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G + K G+ + L G ++ AGTT+E L + + I + Sbjct: 123 DTIFVIGTRLMTKKDSGVKDFADLKGKTVVTTAGTTSERLLRKMNNDKQLGMNIISAKDH 182 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + + R A+ D + L + +P E VI+ S+ + +GD ++ Sbjct: 183 GDSFNTLESGRAVAFMMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDADFKK 242 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 +V A+ E+ G K + ++ P Sbjct: 243 VVDD---AISQVEKSGEAAKIYAKWFENPIPP 271 >gi|320178445|gb|EFW53413.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Shigella boydii ATCC 9905] Length = 302 Score = 214 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 48/257 (18%), Positives = 95/257 (36%), Gaps = 9/257 (3%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK- 77 + S L I K G + G V F+ G+ D+ A+ A+ +K Sbjct: 25 AAPVAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKP 84 Query: 78 ---IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 ++ +P+ ++ R LQ+ D +T + R+ + G + K Sbjct: 85 DLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNVERQTQAAF--SDTIFVVGTRLLTKKG 142 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I + L G ++ V +GTT+E+ L + M I + + + R A+ Sbjct: 143 GDIKDFADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAF 202 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D + L + +P I+ S+ + + D ++ ++ T M T+ E Sbjct: 203 MMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQMQTSGE- 261 Query: 255 GITQKNINQVSKDTTNP 271 +K ++ K+ P Sbjct: 262 --AEKWFDKWFKNPIPP 276 >gi|312797284|ref|YP_004030206.1| glutamate/aspartate-binding protein [Burkholderia rhizoxinica HKI 454] gi|312169059|emb|CBW76062.1| Glutamate/aspartate-binding protein [Burkholderia rhizoxinica HKI 454] Length = 297 Score = 214 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 50/255 (19%), Positives = 92/255 (36%), Gaps = 9/255 (3%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA----IFDDPS 76 + L IK G + G + F+ + G+ + + A + Sbjct: 22 AQEMETLKKIKDSGVIALGHRESSIPFSYYDEKQNVVGYSQELALKIVEAVKHELKTPDL 81 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 K++ +P+ ++ R +Q+ IDI +T L R+ + G + K G Sbjct: 82 KVKLIPITSQNRIPLVQNGTIDIECGSTTNNLDRQKQAAF--SNTIFVVGTRLMTKKDSG 139 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 I + L G ++ AGTT+E L + HNM + I + E R A+ Sbjct: 140 IKDFADLKGKTVVTTAGTTSERLLRKLNQDHNMGMNIISAKDHGESFLTLSTGRAAAFMM 199 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 D + L + + P + VI+ S + +GD + +V A+ E G Sbjct: 200 DDALLAGERAKSSHPGDFVIVGTPQSHEAYGCMMRKGDPAFKKVVD---AAIAKVETSGE 256 Query: 257 TQKNINQVSKDTTNP 271 + + + P Sbjct: 257 AAQIYKKWFESPIPP 271 >gi|261379487|ref|ZP_05984060.1| CjaA protein [Neisseria subflava NJ9703] gi|284797947|gb|EFC53294.1| CjaA protein [Neisseria subflava NJ9703] Length = 284 Score = 214 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 65/281 (23%), Positives = 124/281 (44%), Gaps = 18/281 (6%) Query: 2 YKDFFVSILCLIILFF---------TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 +K S + L +S S+ A+ + IK++G ++ G+ F V A Sbjct: 7 FKALLASAAIAVGLTACGGGSGDAQSSQSSGAATVASIKEKGVIRIGVFGDKPPFGYVDA 66 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 NG +GFDV+ + L+ + P K++++ A R ++S ++D++ N T R Sbjct: 67 NGKNQGFDVEIAKDLAKDLLGSPDKVEFVLTEAANRVEYVRSGKVDLILANFTKTPERTE 126 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 ++ A G + K K I+ V+QL ++ V GTT + +F ++ + Sbjct: 127 AVDFAD--PYMKVALGVVSPKDKPITDVAQLKDQTLLVNKGTTADA----FFTKNHPEVK 180 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + F++ E A + R A D + L+A + P+ V + ++ +APA+ + Sbjct: 181 LLKFDQNTETFDALKDGRGVALAHDNALLWAWAK--ENPNFEVAIGNLGPAEFIAPAVQK 238 Query: 233 GDTEWYNIVSWTHYAMVTAEELG-ITQKNINQVSKDTTNPD 272 G+T+ N V+ AM L +K + V + P+ Sbjct: 239 GNTDLLNWVNGEIAAMKKDGRLKAAYEKTLLPVYGEKVKPE 279 >gi|193885219|pdb|2VHA|A Chain A, Debp gi|193885220|pdb|2VHA|B Chain B, Debp Length = 287 Score = 214 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 47/257 (18%), Positives = 95/257 (36%), Gaps = 9/257 (3%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK- 77 + S L I K G + G V F+ G+ D+ A+ A+ +K Sbjct: 2 AAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKP 61 Query: 78 ---IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 ++ +P+ ++ R LQ+ D +T + R+ + G + K Sbjct: 62 DLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAAF--SDTIFVVGTRLLTKKG 119 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I + L G ++ V +GTT+E+ L + M I + + + R A+ Sbjct: 120 GDIKDFADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAF 179 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D + L + +P I+ S+ + + D ++ ++ T + T+ E Sbjct: 180 MMDDALLAGERAKAKKPDNWDIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGE- 238 Query: 255 GITQKNINQVSKDTTNP 271 +K ++ K+ P Sbjct: 239 --AEKWFDKWFKNPIPP 253 >gi|299770571|ref|YP_003732597.1| Glutamine-binding protein precursor (GlnBP) [Acinetobacter sp. DR1] gi|298700659|gb|ADI91224.1| Glutamine-binding protein precursor (GlnBP) [Acinetobacter sp. DR1] Length = 286 Score = 214 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 69/288 (23%), Positives = 125/288 (43%), Gaps = 23/288 (7%) Query: 1 MYK----DFFVSILCLIILFFTSF-------STNASI---LGDIKKRGFLKCGINTGLVG 46 M+K SI +L ++NA L +KK G L+ + Sbjct: 1 MFKRNSVKILSSIAVAGVLLTACSKTPSTEQASNAQTDHSLEQVKKNGVLRVAVFADDPP 60 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F V + G+ +GFDV + ++ + D K++++ A R L+S + D++ Sbjct: 61 FGYVDSAGNNQGFDVALAKRVTKDLLGDEKKVEFIVTEASNRVEFLKSNRADVVFATFTV 120 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T R+ + + G + K K I+ ++QL G ++ V GT+++ YF Sbjct: 121 TPERKEVVDFSE--PYLKGAFGIVSPKAKPITDIAQLEGKTLIVNKGTSSDT----YFTK 174 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 H K + + FER + A R DA + D + YAL PS + I + + Sbjct: 175 HYPKVNLLKFERNSDAFKALTDGRGDAISQDST--YALAWAAKNPSYVAGIQSIGDQEFI 232 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSKDTTNPDV 273 APA+ +G+T+ N ++ + T+ E+ I + + + D+ NP+V Sbjct: 233 APAVKKGNTQLLNWLNTEIKQLRTSGEIKKIYDETLKPIYGDSVNPNV 280 >gi|239503576|ref|ZP_04662886.1| Glutamine-binding protein precursor (GlnBP) [Acinetobacter baumannii AB900] Length = 286 Score = 214 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 69/288 (23%), Positives = 125/288 (43%), Gaps = 23/288 (7%) Query: 1 MYK----DFFVSILCLIILFFTSF-------STNASI---LGDIKKRGFLKCGINTGLVG 46 M+K S+ +L ++NA L +KK G L+ + Sbjct: 1 MFKRNSIKILSSLAVAGVLLTACSKTPSTEQASNAQTDHSLEQVKKNGVLRVAVFADDPP 60 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F V + G+ +GFDV + ++ + D K++++ A R L+S + D++ Sbjct: 61 FGYVDSAGNNQGFDVALAKRVTKDLLGDEKKVEFIVTEASNRVEFLKSNRADVVLATFTV 120 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T R+ + A G + K K I+ ++QL G ++ V GT+++ YF Sbjct: 121 TPERKEVVDFAE--PYLKGAFGIVSPKAKPITDIAQLEGKTLIVNKGTSSDT----YFTK 174 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 H K + + FER + A R DA + D + YAL PS + I + + Sbjct: 175 HYPKVNLLKFERNSDAFKALTDGRGDAISQDST--YALAWAAKNPSYVAGIQSIGDQEFI 232 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSKDTTNPDV 273 APA+ +G+T+ N ++ + T+ E+ I + + + D+ NP+V Sbjct: 233 APAVKKGNTQLLNWLNTEIKQLRTSGEIKKIYDETLKPIYGDSVNPNV 280 >gi|167990674|ref|ZP_02571774.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205331024|gb|EDZ17788.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] Length = 302 Score = 214 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 49/278 (17%), Positives = 99/278 (35%), Gaps = 14/278 (5%) Query: 3 KDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 + ++L + + + + S L I K G + G V F+ Sbjct: 4 RKLTTAMLVMGLSAGLAHAEDGAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVV 63 Query: 58 GFDVDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ D+ A+ A+ +K ++ +P+ ++ R LQ+ D +T L R+ Sbjct: 64 GYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQ 123 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + G + K I L G ++ V +GTT+E+ L + M Sbjct: 124 AAF--SDTIFVVGTRLLTKKGGDIKDFPDLKGKAVVVTSGTTSEILLHKLNEEQKMGMRI 181 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + + + R A+ D + L + +P I+ S+ + + Sbjct: 182 ISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKN 241 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 E+ ++ T T+ E +K ++ K+ P Sbjct: 242 APEFKKLMDDTIAQAQTSGE---AEKWFDKWFKNPIPP 276 >gi|260550584|ref|ZP_05824793.1| ArtI protein [Acinetobacter sp. RUH2624] gi|260406295|gb|EEW99778.1| ArtI protein [Acinetobacter sp. RUH2624] Length = 286 Score = 214 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 70/288 (24%), Positives = 126/288 (43%), Gaps = 23/288 (7%) Query: 1 MYKDF---FVSILCLIILFFTSFSTNASI-----------LGDIKKRGFLKCGINTGLVG 46 M+K +S L + + T+ S S L +KK G L+ + Sbjct: 1 MFKRNSIKILSSLAVAGVLLTACSKTPSTEQASNSQEDHSLEQVKKNGVLRVAVFADDPP 60 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F V + G+ +GFDV + ++ + D K++++ A R L+S + D++ Sbjct: 61 FGYVDSAGNNQGFDVALAKRVTKDLLGDEKKVEFIVTEASNRVEFLKSNRADVVFATFTV 120 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T R+ + A G + K K I+ ++QL G ++ V GT+++ YF Sbjct: 121 TPERKEVVDFAE--PYLKGAFGIVSPKAKPITDIAQLEGKTLIVNKGTSSDT----YFTK 174 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 H K + + FER + A R DA + D + YAL PS + I + + Sbjct: 175 HYPKVNLLKFERNSDAFKALTDGRGDAISQDST--YALAWAAKNPSYVAGIQSIGDQEFI 232 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSKDTTNPDV 273 APA+ +G+T+ N ++ + T+ E+ I + + + D+ NP+V Sbjct: 233 APAVKKGNTQLLNWLNTEIKQLRTSGEIKKIYDETLKPIYGDSVNPNV 280 >gi|149926670|ref|ZP_01914930.1| putative ABC transporter, glutamate receptor [Limnobacter sp. MED105] gi|149824599|gb|EDM83815.1| putative ABC transporter, glutamate receptor [Limnobacter sp. MED105] Length = 299 Score = 214 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 51/251 (20%), Positives = 97/251 (38%), Gaps = 9/251 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS----KIQY 80 L I + + G V F+ + N G+ +D C + A+ +Q Sbjct: 28 GTLKKITETKTIVVGYRESSVPFSYLDNNQKPIGYHMDMCNKVVDAVKAKLKMPSLNVQL 87 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 P+ + R LQ+ ID+ +T ++ R+ + A T+ ++ K GI S+ Sbjct: 88 QPVTSANRIPLLQNGTIDMECGSTTNSVARQEQVSFANS--TFITSVKIVVKKNSGIKSL 145 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + L G I +GTT+ + K N+ + I + E R A+ D Sbjct: 146 ADLDGQPIATTSGTTSVQLIKQNEKGANINFKEIYGKDHAESFLLVANDRAKAFVMDDIL 205 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 + L + P E + LP+I+ P + + D ++ ++ T M+ + E +K Sbjct: 206 IAGLVAQSKNPDEFMFLPEILRTEPYGIMLRKDDPQFKALLDETVNGMIKSGE---AEKL 262 Query: 261 INQVSKDTTNP 271 + + P Sbjct: 263 YTKWFMNPIPP 273 >gi|83312881|ref|YP_423145.1| amino acid ABC transporter periplasmic protein [Magnetospirillum magneticum AMB-1] gi|82947722|dbj|BAE52586.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Magnetospirillum magneticum AMB-1] Length = 302 Score = 214 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 57/268 (21%), Positives = 111/268 (41%), Gaps = 8/268 (2%) Query: 2 YKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 K F + + + + T + A L +K+ G + G+ + + + G+ Sbjct: 1 MKPFVLPLFLALAVISTGGAARAEPTLDKVKRTGSVVLGVREASYPLSYLDGDKKPIGYH 60 Query: 61 VDFCRALSSA----IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 VD CR ++ A + +++ + +K R L ID+ +T R+ + Sbjct: 61 VDICRRVTEAVKAQLGLAALEVRTEVVTSKTRIPRLLDGGIDLECGSTTNNAARQTQVAF 120 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 A P TY + K I +SQL G ++ AG+T+ L + ++K + Sbjct: 121 A--PTTYVASVRIAVKKAAHIGKLSQLDGKAVATTAGSTSVQLLKARVQGRDIKVTELFG 178 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E + + A+ D + L L ++ P ++ ILP ++ P+A + +GD E Sbjct: 179 NDHAESFKMLESDQAAAFVMDDNLLAGLIASSAAPKDYQILPQTLNTEPIAIMLRKGDPE 238 Query: 237 WYNIVSWTHYAMVTAEELG-ITQKNINQ 263 + +V T AM+ + E+G + K Sbjct: 239 FKALVDRTVKAMMESGEVGRLYAKWFQS 266 >gi|17545692|ref|NP_519094.1| amino-acid-binding periplasmic (PBP) ABC transporter protein [Ralstonia solanacearum GMI1000] gi|17427986|emb|CAD14675.1| probable amino-acid-binding periplasmic (pbp) abc transporter protein [Ralstonia solanacearum GMI1000] Length = 303 Score = 214 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 50/277 (18%), Positives = 104/277 (37%), Gaps = 12/277 (4%) Query: 7 VSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 ++LC + F+ + AS L I+ G ++ F+ A+ G+ VD Sbjct: 11 AALLCTSLSIFSPGTALASTTPVLDRIRDTGIVRIAHRESASPFSYYDADKKPVGYAVDL 70 Query: 64 CRALSSAI----FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 C + + K+QY+ + R +Q + D+ T RE +AF Sbjct: 71 CLRVVDKLRTELKRPDLKVQYVLVTPSTRIPTIQEGKADLECSTTTNN--RERREQVAFT 128 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G ++ GI L ++ GTT+ L + ++ + Sbjct: 129 IPHYIAGIRMLVKTASGIHRWDDLRDKTVVSTKGTTSVAELRKMNDSRVLRIKFEEVKEH 188 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A + + DA+ D LY+ + P ++ ++ D+++ P A + + D ++ Sbjct: 189 AEAFAMVESGKADAFVMDDVQLYSFRANAKHPQDYTVVGDMMTVEPYAIMLSKSDPDFKR 248 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRF 276 +V A++ + +K + + P+ + Sbjct: 249 MVDRAMTAIILDYD---AEKLYKKWFQQPIPPNSAKL 282 >gi|157369457|ref|YP_001477446.1| glutamate and aspartate transporter subunit [Serratia proteamaculans 568] gi|157321221|gb|ABV40318.1| extracellular solute-binding protein family 3 [Serratia proteamaculans 568] Length = 298 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 53/279 (18%), Positives = 100/279 (35%), Gaps = 17/279 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K L L+++ + +A L IK G + G V F+ Sbjct: 3 MRK----LALSLLLIGTAANVAHAEELTGTLKKIKDNGVIVVGHRESSVPFSYYDNQQKV 58 Query: 57 KGFDVDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G+ D+ + A+ + +++ LP+ ++ R LQ+ D +T L R+ Sbjct: 59 VGYSQDYSNQIVEAVKKKLNAPDLQVKMLPITSQNRIPLLQNGTFDFECGSTTNNLERQK 118 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + G ++ K + L+G + V +GTT+E+ L + M Sbjct: 119 QAAF--SDTIFVVGTRLLVKKGSDVKDFKDLAGKPVVVTSGTTSEVLLNKLNDSGKMNMR 176 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 I + + + R A+ D + L + +P + I+ SK + + Sbjct: 177 IISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDQWEIIATPQSKEAYGCMLRK 236 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 D E+ +V T T+ E K ++ K P Sbjct: 237 DDPEFKKLVDDTIAQAQTSGE---AAKWFDKWFKQPIPP 272 >gi|193077069|gb|ABO11827.2| ArtI protein [Acinetobacter baumannii ATCC 17978] Length = 286 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 70/288 (24%), Positives = 126/288 (43%), Gaps = 23/288 (7%) Query: 1 MYKDF---FVSILCLIILFFTSFSTNASI-----------LGDIKKRGFLKCGINTGLVG 46 M+K +S L + + T+ S S L +KK G L+ + Sbjct: 1 MFKRNSIKILSSLAVAGVLLTACSKTPSTEQASNAQEDHSLEQVKKNGVLRVAVFADDPP 60 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F V + G+ +GFDV + ++ + D K++++ A R L+S + D++ Sbjct: 61 FGYVDSAGNNQGFDVALAKRVTKDLLGDEKKVEFIVTEASNRVEFLKSNRADVVFATFTV 120 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T R+ + A G + K K I+ ++QL G ++ V GT+++ YF Sbjct: 121 TPERKEVVDFAE--PYLKGAFGIVSPKAKPITDIAQLEGKTLIVNKGTSSDT----YFTK 174 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 H K + + FER + A R DA + D + YAL PS + I + + Sbjct: 175 HYPKVNLLKFERNSDAFKALTDGRGDAISQDST--YALAWAAKNPSYVAGIQSIGDQEFI 232 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSKDTTNPDV 273 APA+ +G+T+ N ++ + T+ E+ I + + + D+ NP+V Sbjct: 233 APAVKKGNTQLLNWLNTEIKQLRTSGEIKKIYDETLKPIYGDSVNPNV 280 >gi|282599606|ref|ZP_05971190.2| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Providencia rustigianii DSM 4541] gi|282568694|gb|EFB74229.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Providencia rustigianii DSM 4541] Length = 310 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 51/275 (18%), Positives = 104/275 (37%), Gaps = 10/275 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++++ L L IK G + G V F+ + G+ Sbjct: 16 MSK-LVLTMMLLGATCAVQAEELNGTLKKIKDNGVIVVGHRESSVPFSYYDNSQKVVGYS 74 Query: 61 VDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 D+ + A+ + +++ +P+ ++ R LQ+ D +T L R+ Sbjct: 75 QDYSNQIVDAVKKKLNMPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQAAF 134 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + G + K GI + L+G ++ V +GTT+E+ L NMK I Sbjct: 135 --SNTIFVVGTRLLAKKDAGIKDFADLAGKNVVVTSGTTSEIILNQLNDQKNMKMRIISA 192 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + + R A+ D + L + +P+ I+ ++ + + D + Sbjct: 193 KDHGDSFRTLESGRAVAFMMDDALLAGERAKAKQPAIWEIVGKPQTQEAYGCMLRKDDPQ 252 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + ++ T TA++ G +K+ N+ P Sbjct: 253 FKALIDETIS---TAQKSGTAEKSFNRWFNQPIPP 284 >gi|193069104|ref|ZP_03050062.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli E110019] gi|218694095|ref|YP_002401762.1| glutamate and aspartate transporter subunit [Escherichia coli 55989] gi|192957648|gb|EDV88093.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli E110019] gi|218350827|emb|CAU96521.1| glutamate and aspartate transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli 55989] gi|324116729|gb|EGC10644.1| extracellular solute-binding protein 3 [Escherichia coli E1167] Length = 302 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 47/257 (18%), Positives = 95/257 (36%), Gaps = 9/257 (3%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK- 77 + S L I K G + G V F+ G+ D+ A+ A+ +K Sbjct: 25 AAPVAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKP 84 Query: 78 ---IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 ++ +P+ ++ R LQ+ D +T + R+ + G + K Sbjct: 85 DLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAAF--SDTIFVVGTRLLTKKG 142 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I + L G ++ V +GTT+E+ L + M I + + + R A+ Sbjct: 143 GDIKDFADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAF 202 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D + L + +P I+ S+ + + D ++ ++ T + T+ E Sbjct: 203 MMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGE- 261 Query: 255 GITQKNINQVSKDTTNP 271 +K ++ K+ P Sbjct: 262 --AEKWFDKWFKNPIPP 276 >gi|292487616|ref|YP_003530488.1| putative glutamate/aspartate ABC transporter periplasmic protein [Erwinia amylovora CFBP1430] gi|292898854|ref|YP_003538223.1| glutamate/aspartate ABC transporter substrate-binding protein [Erwinia amylovora ATCC 49946] gi|291198702|emb|CBJ45811.1| glutamate/aspartate ABC transporter, substrate-binding protein [Erwinia amylovora ATCC 49946] gi|291553035|emb|CBA20080.1| putative glutamate/aspartate ABC transport system, periplasmic component [Erwinia amylovora CFBP1430] Length = 309 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 59/287 (20%), Positives = 105/287 (36%), Gaps = 24/287 (8%) Query: 4 DFFVSILCLIILFFTSFSTNAS---------------ILGDIKKRGFLKCGINTGLVGFA 48 F LCL + S +A L I K G + G V F+ Sbjct: 2 KFRKLGLCLALAGIASGIAHAEDAKAPATADAQQQTHTLEKIAKNGVIVVGHRESSVPFS 61 Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNT 104 G+ D+ A+ +AI +K ++ LP+ ++ R LQ+ D +T Sbjct: 62 YYDNQQKVVGYSQDYSDAIVAAIKKKLNKPDLQVKMLPVTSQNRIPLLQNGTYDFECGST 121 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164 + R+ + + G ++ K I + L G ++ V +GTT+E+ L Sbjct: 122 TNNIERQKQASFSNSI--FVVGTRLLVKKGSAIKDFADLKGKTVVVTSGTTSEILLNKLN 179 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 M + + + + R A+ D + L + +PSE IL S+ Sbjct: 180 DEQKMGMRIVSAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPSEWEILGTPQSRE 239 Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + +GD+E+ ++ T V A+ G K ++ K P Sbjct: 240 AYGCMLRKGDSEFKKLMDDTI---VQAQTSGEAAKWFDKWFKQPVPP 283 >gi|50120253|ref|YP_049420.1| glutamate and aspartate transporter subunit [Pectobacterium atrosepticum SCRI1043] gi|49610779|emb|CAG74224.1| glutamate/aspartate periplasmic binding protein [Pectobacterium atrosepticum SCRI1043] Length = 298 Score = 213 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 51/275 (18%), Positives = 95/275 (34%), Gaps = 9/275 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K IL A L +K G + G V F+ G+ Sbjct: 3 MRKLALSLILLGTAASAAQAEDLAGTLKKVKDNGVIVIGHRESSVPFSYYDNTQKVVGYS 62 Query: 61 VDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 + + AI +++ LP+ ++ R LQ+ D+ +T L R+ Sbjct: 63 QAYSDKIVEAIKKKLDAPNLQVKLLPITSQNRIPLLQNGTFDLECGSTTNNLERQKQAAF 122 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + G + K G+ L+G ++ V +GTT+E+ L + MK I Sbjct: 123 --SNTIFVVGTRLLAKKDSGVKDFPDLAGKTVVVTSGTTSEVLLNKLNEEKQMKMRIISA 180 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + + R A+ D + L + + I+ S+ + + D + Sbjct: 181 KDHGDSFRTLESGRAVAFMMDDALLAGERAKAKNADQWDIVGKAQSEEAYGCMLRKDDPQ 240 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + +V T + T+ E K ++ K P Sbjct: 241 FKKLVDDTIAEVQTSGE---ADKWFDRWFKQPIPP 272 >gi|170731989|ref|YP_001763936.1| extracellular solute-binding protein [Burkholderia cenocepacia MC0-3] gi|169815231|gb|ACA89814.1| extracellular solute-binding protein family 3 [Burkholderia cenocepacia MC0-3] Length = 297 Score = 213 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 48/274 (17%), Positives = 101/274 (36%), Gaps = 9/274 (3%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 Y + L +++ L IK G + G + F+ N G+ Sbjct: 3 YHKAVLMAAALCAFASGAYAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGYSR 62 Query: 62 DFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 +F + A+ + +++ +P+ ++ R +Q+ +DI +T L R+ Sbjct: 63 EFQLKIVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLERQQQAAF- 121 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + G + K G+ + L G ++ AGTT+E L + + I + Sbjct: 122 -SDTIFVIGTRLMTKKDSGVKDFADLKGKTVVTTAGTTSERLLRKMNNDKQLGMNIISAK 180 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + + R A+ D + L + +P + VI+ S+ + +GD ++ Sbjct: 181 DHGDSFNTLESGRAVAFMMDDALLAGERAKAKQPGDWVIVGTPQSEEAYGCMMRKGDADF 240 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 +V A+ E+ G K + ++ P Sbjct: 241 KKVVDD---AISQVEKSGEAAKIYAKWFENPIPP 271 >gi|213609637|ref|ZP_03369463.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 285 Score = 213 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 48/257 (18%), Positives = 91/257 (35%), Gaps = 9/257 (3%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK- 77 S L I K G + G V F+ G+ D+ A+ + +K Sbjct: 8 GAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEVVKKKLNKP 67 Query: 78 ---IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 ++ +P+ ++ R LQ+ D +T L R+ + G + K Sbjct: 68 DLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQAAF--SDTIFVVGTRLLTKKG 125 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I L G ++ V +GTT+E+ L + M I + + + R A+ Sbjct: 126 GDIKDFPDLKGKAVVVTSGTTSEILLHKLNEEQKMGMRIISAKDHGDSFRTLESGRAVAF 185 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D + L + +P I+ S+ + + D E+ ++ T T+ E Sbjct: 186 MMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKNDPEFKKLMDDTIAQAQTSGE- 244 Query: 255 GITQKNINQVSKDTTNP 271 +K ++ K+ P Sbjct: 245 --AEKWFDKWFKNPIPP 259 >gi|305431997|ref|ZP_07401164.1| ABC superfamily ATP binding cassette transporter, binding protein [Campylobacter coli JV20] gi|304445081|gb|EFM37727.1| ABC superfamily ATP binding cassette transporter, binding protein [Campylobacter coli JV20] Length = 279 Score = 213 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 59/279 (21%), Positives = 112/279 (40%), Gaps = 16/279 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + +F + N+ L IK+ G ++ G+ F V G Sbjct: 1 MKKMLLSIFTTFVAVFLAACGGNSDSGASNSLERIKQDGVVRIGVFGDKPPFGYVDEKGV 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +G+D+ + ++ + D +K+Q++ + A R L+S ++DI+ N T R + Sbjct: 61 NQGYDIVLAKRIAKELLGDENKVQFVLVEAANRVEFLKSNKVDIILANFTQTPER--AEQ 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F G + + ISS+ L ++ + GTT + YF + Sbjct: 119 VDFCLPYMKVALGVAVPQDSNISSIEDLKDKTLLLNKGTTADA----YFTKEYPDIKTLK 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 +++ E AA R DA + D + L+A + P + + ++ +K +APA+ +GD Sbjct: 175 YDQNTETFAALIDQRGDALSHDNTLLFAWVK--EHPEFKMAIKELGNKDVIAPAVKKGDK 232 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 E + + E K + K DV+ Sbjct: 233 ELKEFID---NLITKLGEEQFFHKAYGETLKSHFGDDVK 268 >gi|78065231|ref|YP_368000.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia sp. 383] gi|77965976|gb|ABB07356.1| L-glutamate-binding protein / L-aspartate-binding protein [Burkholderia sp. 383] Length = 297 Score = 213 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 48/274 (17%), Positives = 100/274 (36%), Gaps = 9/274 (3%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 Y+ + L + + L IK G + G + F+ N G+ Sbjct: 3 YQKAVLMFAALCAFASGAHAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGYSR 62 Query: 62 DFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 +F + A+ + +++ +P+ ++ R +Q+ +DI +T R+ Sbjct: 63 EFQLKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNAERQQQAAF- 121 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + G + K G+ + L G ++ AGTT+E L + + I + Sbjct: 122 -SDTIFVIGTRLMTKKDSGVKDFADLKGKTVVTTAGTTSERLLRKMNNDKQLGMNIISAK 180 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + + R A+ D + L + +P E VI+ S+ + +GD ++ Sbjct: 181 DHGDSFNTLESGRAVAFMMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDADF 240 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 +V A+ E+ G K + ++ P Sbjct: 241 KKVVDD---AISQVEKSGEAAKIYAKWFENPIPP 271 >gi|296103387|ref|YP_003613533.1| glutamate/aspartate transport system substrate-binding protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057846|gb|ADF62584.1| glutamate/aspartate transport system substrate-binding protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 316 Score = 213 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 50/277 (18%), Positives = 100/277 (36%), Gaps = 13/277 (4%) Query: 3 KDFFVSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 + ++L + + + S L I K G + G V F+ G Sbjct: 19 RKLATAMLVMGMSAGVVHAEDAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNTQKVVG 78 Query: 59 FDVDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + D+ A+ A+ +K ++ +P+ ++ R LQ+ D +T L R+ Sbjct: 79 YSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQA 138 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + G + K I + L G ++ V +GTT+E+ L M I Sbjct: 139 AF--SDTIFVVGTRLLTKKGGDIKDFADLKGKAVVVTSGTTSEVLLHKLNDEKKMDMRII 196 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + + R A+ D + L + +P I+ SK + + D Sbjct: 197 SAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWDIVGTAQSKEAYGCMLRKDD 256 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 ++ ++ T + T+ E +K ++ K+ P Sbjct: 257 PQFKKLIDDTIAQVQTSGE---AEKWFDKWFKNPIPP 290 >gi|169796305|ref|YP_001714098.1| amino acid ABC transporter periplasmic substrate-binding protein [Acinetobacter baumannii AYE] gi|213156959|ref|YP_002319004.1| ABC transporter, periplasmic binding protein [Acinetobacter baumannii AB0057] gi|215483764|ref|YP_002325989.1| Glutamine-binding protein precursor (GlnBP) [Acinetobacter baumannii AB307-0294] gi|294837743|ref|ZP_06782426.1| Glutamine-binding protein precursor (GlnBP) [Acinetobacter sp. 6013113] gi|294859370|ref|ZP_06797139.1| Glutamine-binding protein precursor (GlnBP) [Acinetobacter sp. 6013150] gi|301344840|ref|ZP_07225581.1| Glutamine-binding protein precursor (GlnBP) [Acinetobacter baumannii AB056] gi|301510867|ref|ZP_07236104.1| Glutamine-binding protein precursor (GlnBP) [Acinetobacter baumannii AB058] gi|301596929|ref|ZP_07241937.1| Glutamine-binding protein precursor (GlnBP) [Acinetobacter baumannii AB059] gi|169149232|emb|CAM87114.1| putative amino acid transport protein (ABC superfamily, peri_bind) [Acinetobacter baumannii AYE] gi|213056119|gb|ACJ41021.1| ABC transporter, periplasmic binding protein [Acinetobacter baumannii AB0057] gi|213987452|gb|ACJ57751.1| Glutamine-binding protein precursor (GlnBP) [Acinetobacter baumannii AB307-0294] Length = 286 Score = 213 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 69/288 (23%), Positives = 126/288 (43%), Gaps = 23/288 (7%) Query: 1 MYKDF---FVSILCLIILFFTSFSTNASI-----------LGDIKKRGFLKCGINTGLVG 46 M+K +S L + + T+ S S L +KK G L+ + Sbjct: 1 MFKRNSIKILSSLAVAGVLLTACSKTPSTEQASNAQEDHSLEQVKKNGVLRVAVFADDPP 60 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F V + G+ +GFDV + ++ + D K++++ A R L+S + D++ Sbjct: 61 FGYVDSAGNNQGFDVALAKRVTKDLLGDEKKVEFIVTEASNRVEFLKSNRADVVFATFTV 120 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T R+ + A G + K + I+ ++QL G ++ V GT+++ YF Sbjct: 121 TPERKEVVDFAE--PYLKGAFGIVSPKARPITDIAQLEGKTLIVNKGTSSDT----YFTK 174 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 H K + + FER + A R DA + D + YAL PS + I + + Sbjct: 175 HYPKVNLLKFERNSDAFKALTDGRGDAISQDST--YALAWAAKNPSYVAGIQSIGDQEFI 232 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSKDTTNPDV 273 APA+ +G+T+ N ++ + T+ E+ I + + + D+ NP+V Sbjct: 233 APAVKKGNTQLLNWLNTEIKQLRTSGEIKKIYDETLKPIYGDSVNPNV 280 >gi|238755070|ref|ZP_04616418.1| Glutamate/aspartate periplasmic-binding protein [Yersinia ruckeri ATCC 29473] gi|238706774|gb|EEP99143.1| Glutamate/aspartate periplasmic-binding protein [Yersinia ruckeri ATCC 29473] Length = 298 Score = 213 bits (544), Expect = 3e-53, Method: Composition-based stats. Identities = 52/279 (18%), Positives = 102/279 (36%), Gaps = 17/279 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K L L+++ S +A L IK G + G V F+ Sbjct: 3 MRK----LALSLLLVGMASSVAHAEELTGTLKKIKDNGVIVVGHRESSVPFSYYDNQQKV 58 Query: 57 KGFDVDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G+ D+ + A+ + +++ +P+ ++ R LQ+ D +T L R+ Sbjct: 59 VGYSQDYSNLIVDAVKKKLNLPDLQVKLIPVTSQNRIPLLQNGTFDFECGSTTNNLERQK 118 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + G + K GI L+G ++ V +GTT+E+ L + + M Sbjct: 119 QAAF--SNTIFVVGTRLLTKKDSGIKDFKDLAGKAVVVTSGTTSEVLLNKLNEENKMDMR 176 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 I + + + R A+ D + L + + E I+ S+ + + Sbjct: 177 IISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKAGEWEIVGTPQSQEAYGCMLRK 236 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 D ++ ++ T TA+ G+ K+ + P Sbjct: 237 DDPQFKALMDQTI---ATAQTSGVATKSFERWFTQPIPP 272 >gi|300823028|ref|ZP_07103162.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 119-7] gi|300920529|ref|ZP_07136955.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 115-1] gi|331676315|ref|ZP_08377027.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli H591] gi|300412468|gb|EFJ95778.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 115-1] gi|300524377|gb|EFK45446.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 119-7] gi|331076373|gb|EGI47655.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli H591] Length = 327 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 47/257 (18%), Positives = 95/257 (36%), Gaps = 9/257 (3%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK- 77 + S L I K G + G V F+ G+ D+ A+ A+ +K Sbjct: 50 AAPVAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKP 109 Query: 78 ---IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 ++ +P+ ++ R LQ+ D +T + R+ + G + K Sbjct: 110 DLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAAF--SDTIFVVGTRLLTKKG 167 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I + L G ++ V +GTT+E+ L + M I + + + R A+ Sbjct: 168 GDIKDFADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAF 227 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D + L + +P I+ S+ + + D ++ ++ T + T+ E Sbjct: 228 MMDDALLAGERAKAKKPDNWDIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGE- 286 Query: 255 GITQKNINQVSKDTTNP 271 +K ++ K+ P Sbjct: 287 --AEKWFDKWFKNPIPP 301 >gi|291276583|ref|YP_003516355.1| putative amino acid transporter periplasmic solute-binding protein [Helicobacter mustelae 12198] gi|290963777|emb|CBG39612.1| putative amino-acid transporter periplasmic solute-binding protein [Helicobacter mustelae 12198] Length = 272 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 61/278 (21%), Positives = 127/278 (45%), Gaps = 18/278 (6%) Query: 1 MYKDFFVSILCLIILFFTSFS--TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K F+ I+ + ++F+ S S IK++G L+ G+ + F V A G++ G Sbjct: 1 MKKFAFLFIIFMTMMFWGCSSDKEKQSNFDLIKQKGVLRVGVFSDKPPFGYVDAKGEFDG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDV + ++ + + ++++ P+ A R L+S ++D++ N T R + A Sbjct: 61 FDVYIAKRIAKDLLGEKGRVEFYPVEAAARIEFLKSGKVDLIMANFTKTKERAEVVDFAK 120 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y ++ K I+++SQL ++ V GTT + YF ++ + + +++ Sbjct: 121 ---PYMKVSLGVVSKNGEITTISQLKDQTLIVDRGTTADF----YFSKNHPEVKLLKYDQ 173 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E A ++ R A D + L+A P V + ++ ++ +APAI++GD ++ Sbjct: 174 NTEAFLALKSDRGVALAHDNTLLFAWAKQ--NPPFAVGIAELGNQDVIAPAIVKGDAKFL 231 Query: 239 NIVSWTHYAMVTAEELGI----TQKNINQVSKDTTNPD 272 + W + + + G + ++ +PD Sbjct: 232 D---WLNQEITKLTKEGFMKQAYDATLKPAYGNSVDPD 266 >gi|330429988|gb|AEC21322.1| amino-acid ABC transporter binding protein precursor [Pusillimonas sp. T7-7] Length = 299 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 54/275 (19%), Positives = 103/275 (37%), Gaps = 10/275 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ + + T+ L IK G + G + F+ + G+ Sbjct: 1 MKKTT-ITLFTALAVVATAPVYADGRLEKIKSSGEIALGHRDSSIPFSYLDDKQQPIGYS 59 Query: 61 VDFCRALSSA----IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +D C+ + A + D ++ +P+ + R L + +D+ ++ T R+ + Sbjct: 60 MDICKNIVEAVKEKLGMDKLNVKMVPVTSSTRIPLLANGTVDLNCGSSTNTKERQAQVTF 119 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 A P T+ F+ K I+S+ L G ++ AGT+ + + I Sbjct: 120 A--PTTFVTATRFVAKKSSNINSLEDLKGKTVISTAGTSNIRWATGANDQQKLGMNIIPA 177 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + E R A+ D L L T+ PSE +I D + P A + D E Sbjct: 178 KDHAEALLTVNNGRAAAFFMDDILLAGLVATSRDPSEWMISKDAYTVEPYAIMEPKDDPE 237 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + +V T M+ + G + + + P Sbjct: 238 FKKVVDDTIKGMM---KDGTLAELYKKWFESPIPP 269 >gi|260866803|ref|YP_003233205.1| periplasmic-binding component GltI [Escherichia coli O111:H- str. 11128] gi|257763159|dbj|BAI34654.1| periplasmic-binding component GltI [Escherichia coli O111:H- str. 11128] gi|323179868|gb|EFZ65425.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli 1180] Length = 302 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 47/257 (18%), Positives = 95/257 (36%), Gaps = 9/257 (3%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK- 77 + S L I K G + G V F+ G+ D+ A+ A+ +K Sbjct: 25 AAPVAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKP 84 Query: 78 ---IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 ++ +P+ ++ R LQ+ D +T + R+ + G + K Sbjct: 85 DLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAAF--SDTIFVVGTRLLTKKS 142 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I + L G ++ V +GTT+E+ L + M I + + + R A+ Sbjct: 143 GDIKDFADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAF 202 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D + L + +P I+ S+ + + D ++ ++ T + T+ E Sbjct: 203 MMDDALLAGERAKAKKPDNWDIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGE- 261 Query: 255 GITQKNINQVSKDTTNP 271 +K ++ K+ P Sbjct: 262 --AEKWFDKWFKNPIPP 276 >gi|325121846|gb|ADY81369.1| putative ABC transporter, periplasmic binding protein, amino acid [Acinetobacter calcoaceticus PHEA-2] Length = 286 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 70/288 (24%), Positives = 126/288 (43%), Gaps = 23/288 (7%) Query: 1 MYKDF---FVSILCLIILFFTSFSTNASI-----------LGDIKKRGFLKCGINTGLVG 46 M+K +S L + + T+ S S L +KK G L+ + Sbjct: 1 MFKRNSIKILSGLAVAGVLLTACSKTPSTEQASNTQEDHSLEQVKKNGVLRVAVFADDPP 60 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F V + G+ +GFDV + ++ + D K++++ A R L+S + D++ Sbjct: 61 FGYVDSAGNNQGFDVALAKRVTKDLLGDEKKVEFIVTEASNRVEFLKSNRADVVFATFTV 120 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T R+ + A G + K K I+ ++QL G ++ V GT+++ YF Sbjct: 121 TPERKEVVDFAE--PYLKGAFGIVSPKAKPITDIAQLEGKTLIVNKGTSSDT----YFTK 174 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 H K + + FER + A R DA + D + YAL PS + I + + Sbjct: 175 HYPKVNLLKFERNSDAFKALTDGRGDAISQDST--YALAWAAKNPSYVAGIQSIGDQEFI 232 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQKNINQVSKDTTNPDV 273 APA+ +G+T+ N ++ + T+ E+ I + + + D+ NP+V Sbjct: 233 APAVKKGNTQLLNWLNTEIKQLRTSGEINKIYDETLKPIYGDSVNPNV 280 >gi|300931590|ref|ZP_07146902.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 187-1] gi|300460614|gb|EFK24107.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 187-1] Length = 327 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 47/252 (18%), Positives = 94/252 (37%), Gaps = 9/252 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQ 79 S L I K G + G V F+ G+ D+ A+ A+ +K ++ Sbjct: 55 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 114 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ + G + K I Sbjct: 115 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAAF--SDTIFVVGTRLLTKKGGDIKD 172 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L G ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 173 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 232 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L + +P I+ S+ + + D ++ ++ T + T+ E +K Sbjct: 233 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGE---AEK 289 Query: 260 NINQVSKDTTNP 271 ++ K+ P Sbjct: 290 WFDKWFKNPIPP 301 >gi|300927239|ref|ZP_07142971.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 182-1] gi|301329186|ref|ZP_07222177.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 78-1] gi|300416805|gb|EFK00116.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 182-1] gi|300844474|gb|EFK72234.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 78-1] Length = 327 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 47/252 (18%), Positives = 94/252 (37%), Gaps = 9/252 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQ 79 S L I K G + G V F+ G+ D+ A+ A+ +K ++ Sbjct: 55 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 114 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ + G + K I Sbjct: 115 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAAF--SDTIFVVGTRLLTKKGGDIKD 172 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L G ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 173 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 232 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L + +P I+ S+ + + D ++ ++ T + T+ E +K Sbjct: 233 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGE---AEK 289 Query: 260 NINQVSKDTTNP 271 ++ K+ P Sbjct: 290 WFDKWFKNPIPP 301 >gi|290476187|ref|YP_003469087.1| glutamate/aspartate ABC transporter periplasmic binding protein [Xenorhabdus bovienii SS-2004] gi|289175520|emb|CBJ82323.1| glutamate/aspartate transport protein (ABC superfamily, peri_bind) [Xenorhabdus bovienii SS-2004] Length = 295 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 50/275 (18%), Positives = 101/275 (36%), Gaps = 10/275 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++++ L + L IK G + G V F+ + G+ Sbjct: 1 MRK-LMLTMMLLSAVGAAHAEELTGTLKKIKDNGIIVVGHRESSVPFSYYDNQQNVVGYA 59 Query: 61 VDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 D+ + A+ +++ +P+ ++ R LQ+ D +T L R+ Sbjct: 60 QDYSNLIVDAVKKKLDMPNLQVKLIPITSQNRIPLLQNGTYDFECGSTTNNLERQKQAAF 119 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + G + +K GI L+G + V +GTT+E+ L M+ I Sbjct: 120 --SNTIFVVGTRLLTNKDSGIKGFDDLAGKHVVVTSGTTSEILLNKLNDEKQMQMRIISA 177 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + + R A+ D + L + +P + VI+ S+ + + D + Sbjct: 178 KDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDQWVIVGKPQSEEAYGCMLRKDDPQ 237 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + ++ T + T+ E +K + K P Sbjct: 238 FKKLIDGTIVKVQTSGE---AEKFFDLWFKQPIPP 269 >gi|325266789|ref|ZP_08133461.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Kingella denitrificans ATCC 33394] gi|324981721|gb|EGC17361.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Kingella denitrificans ATCC 33394] Length = 293 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 60/250 (24%), Positives = 105/250 (42%), Gaps = 9/250 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 L IK G ++ G+ F + ANG +GFDV+ R ++ + P K++++ Sbjct: 47 GDSLARIKAAGVIRIGVFGDKPPFGYLDANGKSQGFDVEIARNMAQDLLGSPDKVEFVLT 106 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 A R ++S ++D+L N T R + + F G + K I+S+ QL Sbjct: 107 EAANRVEYIKSGKVDVLLANFTQTPER--AEVVDFAAPYMQVALGVVSPKNAPITSIDQL 164 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 G ++ V GTT + YF ++ +++ E A + R A D + L+A Sbjct: 165 KGKTLLVNKGTTADA----YFTKNHSDITLQKYDQNTETFDALKDGRGVALAHDNALLWA 220 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNIN 262 + P+ V + + +APA+ +GD V+ AM L +K + Sbjct: 221 WAK--ENPNFDVAIGKLGEPENIAPAVQKGDQALLAWVNSEITAMKQDGRLVAAYEKTLR 278 Query: 263 QVSKDTTNPD 272 V D P+ Sbjct: 279 PVYGDKVKPE 288 >gi|157146734|ref|YP_001454053.1| glutamate and aspartate transporter subunit [Citrobacter koseri ATCC BAA-895] gi|157083939|gb|ABV13617.1| hypothetical protein CKO_02507 [Citrobacter koseri ATCC BAA-895] Length = 317 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 49/252 (19%), Positives = 93/252 (36%), Gaps = 9/252 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQ 79 S L I K G + G V F+ G+ D+ A+ A+ +K ++ Sbjct: 45 GSTLDKIAKNGIIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 104 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ + G + K I Sbjct: 105 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAAF--SDTIFIVGTRLLAKKDSDIKD 162 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L G ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 163 FPDLKGKAVVVTSGTTSEILLHKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 222 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L + +P I+ S+ + + D E+ +V T + T+ E +K Sbjct: 223 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKNDPEFKTLVDDTIAQVQTSGE---AEK 279 Query: 260 NINQVSKDTTNP 271 ++ K+ P Sbjct: 280 WFDKWFKNPIPP 291 >gi|184157761|ref|YP_001846100.1| amino acid ABC transporter periplasmic protein [Acinetobacter baumannii ACICU] gi|294842167|ref|ZP_06786850.1| amino acid ABC transporter periplasmic protein [Acinetobacter sp. 6014059] gi|183209355|gb|ACC56753.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Acinetobacter baumannii ACICU] gi|322508071|gb|ADX03525.1| ArtI protein [Acinetobacter baumannii 1656-2] gi|323517653|gb|ADX92034.1| amino acid ABC transporter periplasmic protein [Acinetobacter baumannii TCDC-AB0715] Length = 286 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 68/288 (23%), Positives = 124/288 (43%), Gaps = 23/288 (7%) Query: 1 MYK----DFFVSILCLIILFFT---------SFSTNAS-ILGDIKKRGFLKCGINTGLVG 46 M+K S+ +L + + A L +KK G L+ + Sbjct: 1 MFKRNSIKILSSLAVAGVLLTACSKTPSTEQASNAQADHSLEQVKKNGVLRVAVFADDPP 60 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F V + G+ +GFDV + ++ + D K++++ A R L+S + D++ Sbjct: 61 FGFVDSAGNNQGFDVALAKRVTKDLLGDEKKVEFIVTEASNRVEFLKSNRADVVFATFTV 120 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T R+ + A G + K K I+ ++QL G ++ V GT+++ YF Sbjct: 121 TPERKEVVDFAE--PYLKGAFGIVSPKAKPITDIAQLEGKTLIVNKGTSSDT----YFTK 174 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 H K + + FER + A R DA + D + YAL PS + I + + Sbjct: 175 HYPKVNLLKFERNSDAFKALTDGRGDAISQDST--YALAWAAKNPSYVAGIQSIGDQEFI 232 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSKDTTNPDV 273 APA+ +G+T+ N ++ + T+ E+ I + + + D+ NP+V Sbjct: 233 APAVKKGNTQLLNWLNTEIKQLRTSGEIKKIYDETLKPIYGDSVNPNV 280 >gi|315299197|gb|EFU58451.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 16-3] gi|332104148|gb|EGJ07494.1| glutamate/aspartate periplasmic binding protein [Shigella sp. D9] Length = 325 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 47/252 (18%), Positives = 94/252 (37%), Gaps = 9/252 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQ 79 S L I K G + G V F+ G+ D+ A+ A+ +K ++ Sbjct: 53 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 112 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ + G + K I Sbjct: 113 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAAF--SDTIFVVGTRLLTKKGGDIKD 170 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L G ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 171 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 230 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L + +P I+ S+ + + D ++ ++ T + T+ E +K Sbjct: 231 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGE---AEK 287 Query: 260 NINQVSKDTTNP 271 ++ K+ P Sbjct: 288 WFDKWFKNPIPP 299 >gi|260555372|ref|ZP_05827593.1| ArtI protein [Acinetobacter baumannii ATCC 19606] gi|260411914|gb|EEX05211.1| ArtI protein [Acinetobacter baumannii ATCC 19606] Length = 286 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 69/288 (23%), Positives = 125/288 (43%), Gaps = 23/288 (7%) Query: 1 MYKDF---FVSILCLIILFFTSFSTNASI-----------LGDIKKRGFLKCGINTGLVG 46 M+K +S + + T+ S S L +KK G L+ + Sbjct: 1 MFKRNSIKILSSFAVAGVLLTACSKTPSTEQASNAQEDHSLEQVKKNGVLRVAVFADDPP 60 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F V + G+ +GFDV + ++ + D K++++ A R L+S + D++ Sbjct: 61 FGYVDSAGNNQGFDVALAKRVTKDLLGDEKKVEFIVTEASNRVEFLKSNRADVVFATFTV 120 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T R+ + A G + K K I+ ++QL G ++ V GT+++ YF Sbjct: 121 TPERKEVVDFAE--PYLKGAFGIVSPKAKPITDIAQLEGKTLIVNKGTSSDT----YFTK 174 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 H K + + FER + A R DA + D + YAL PS + I + + Sbjct: 175 HYPKVNLLKFERNSDAFKALTDGRGDAISQDST--YALAWAAKNPSYVAGIQSIGDQEFI 232 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSKDTTNPDV 273 APA+ +G+T+ N ++ + T+ E+ I + + + D+ NP+V Sbjct: 233 APAVKKGNTQLLNWLNTEIKQLRTSGEIKKIYDETLKPIYGDSVNPNV 280 >gi|107021746|ref|YP_620073.1| extracellular solute-binding protein [Burkholderia cenocepacia AU 1054] gi|116688692|ref|YP_834315.1| extracellular solute-binding protein [Burkholderia cenocepacia HI2424] gi|105891935|gb|ABF75100.1| L-aspartate-binding protein / L-glutamate-binding protein [Burkholderia cenocepacia AU 1054] gi|116646781|gb|ABK07422.1| L-aspartate-binding protein / L-glutamate-binding protein [Burkholderia cenocepacia HI2424] Length = 297 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 49/274 (17%), Positives = 101/274 (36%), Gaps = 9/274 (3%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 Y + L +++ L IK G + G + F+ N G+ Sbjct: 3 YHKAVLMAAALCAFASGAYAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGYSR 62 Query: 62 DFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 +F + A+ + +++ +P+ ++ R +Q+ +DI +T L R+ Sbjct: 63 EFQLKIVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLERQQQAAF- 121 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + G + K G+ + L G ++ AGTT+E L + + I + Sbjct: 122 -SDTIFVIGTRLMTKKDSGVKDFADLKGKTVVTTAGTTSERLLRKMNNDKQLGMNIISAK 180 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + + R A+ D + L + +P E VI+ S+ + +GD ++ Sbjct: 181 DHGDSFNTLESGRAVAFMMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDADF 240 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 +V A+ E+ G K + ++ P Sbjct: 241 KKVVDD---AISQVEKSGEAAKIYAKWFENPIPP 271 >gi|241759167|ref|ZP_04757275.1| antigenic protein [Neisseria flavescens SK114] gi|241320586|gb|EER56863.1| antigenic protein [Neisseria flavescens SK114] Length = 284 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 64/281 (22%), Positives = 121/281 (43%), Gaps = 18/281 (6%) Query: 2 YKDFFVSILCLIILFF---------TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 +K S + L +S S+ A+ + IK++G ++ G+ F V A Sbjct: 7 FKALLASAAIAVGLTACGGSSGDAQSSQSSGAATVASIKEKGVIRIGVFGDKPPFGYVDA 66 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 NG +GFDV+ + L+ + P K++++ A R ++S ++D++ N T R Sbjct: 67 NGKNQGFDVEIAKDLAKDLLGSPDKVEFVLTEAANRVEYVRSGKVDLILANFTKTPERAE 126 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 ++ A G + K K I+ V+QL ++ V GTT + +F + + Sbjct: 127 AVDFAD--PYMKVALGVVSPKGKPITDVAQLKDQTLLVNKGTTADA----FFTKSHPEVK 180 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + F++ E A + R A D + L+A + P V + ++ +APA+ + Sbjct: 181 LLKFDQNTETFDALKDGRGAALAHDNALLWAWAK--ENPDFEVAIGNLGPAEFIAPAVQK 238 Query: 233 GDTEWYNIVSWTHYAMVTAEELG-ITQKNINQVSKDTTNPD 272 G+ + N V+ AM L +K + V + P+ Sbjct: 239 GNADLLNWVNSEIAAMKKDGRLKAAYEKTLLPVYGEKVKPE 279 >gi|332094327|gb|EGI99378.1| glutamate/aspartate periplasmic-binding protein [Shigella boydii 5216-82] Length = 302 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 48/257 (18%), Positives = 95/257 (36%), Gaps = 9/257 (3%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK- 77 + S L I K G + G V F+ G+ D+ A+ A+ +K Sbjct: 25 AAPVAGSTLDKIAKNGMIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKP 84 Query: 78 ---IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 ++ +P+ ++ R LQ+ D +T + R+ + G + K Sbjct: 85 DLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAAF--SDTIFVVGTRLLTKKG 142 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I + L G ++ V +GTT+E+ L + M I + + + R A+ Sbjct: 143 GDIKDFADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAF 202 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D + L + +P I+ S+ + + D ++ ++ T M T+ E Sbjct: 203 MMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQMQTSGE- 261 Query: 255 GITQKNINQVSKDTTNP 271 +K ++ K+ P Sbjct: 262 --AEKWFDKWFKNPIPP 276 >gi|319791947|ref|YP_004153587.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] gi|315594410|gb|ADU35476.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] Length = 304 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 57/233 (24%), Positives = 104/233 (44%), Gaps = 5/233 (2%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK---IQYL 81 L ++ G + G V F+ + A + G+ ++ CRAL +AI D +K I+++ Sbjct: 36 GTLAKARETGAITIGYRESSVPFSYLNARKEPIGYSIELCRALVTAIEDTVNKSLTIKWV 95 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 P+ + R A+ S Q+D+ +T L R+ + P + G ++ K I S Sbjct: 96 PVTSDSRIDAVASGQVDLECGSTTNNLERQKRVSF--SPTMFVSGTKVLVKKGAPIKSFR 153 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L+G + V AGTT E TL D + + + V E ++ + DA+ D L Sbjct: 154 DLAGKKVAVTAGTTNEKTLRDLSEKFKLGINLQVARDHAESFGLVKSGQADAFATDDVLL 213 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 Y L + +++ ++ D +S P +GD + +V+ T + E+ Sbjct: 214 YGLIAQDAAKADYEVVGDFLSYDPYGIMYRKGDAQLAKVVNDTFQVLAEDGEI 266 >gi|331672187|ref|ZP_08372979.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli TA280] gi|331070654|gb|EGI42017.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli TA280] Length = 327 Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 47/252 (18%), Positives = 94/252 (37%), Gaps = 9/252 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQ 79 S L I K G + G V F+ G+ D+ A+ A+ +K ++ Sbjct: 55 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 114 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ + G + K I Sbjct: 115 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAAF--SDTIFVVGTRLLTKKGGDIKD 172 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L G ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 173 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFHTLESGRAVAFMMDDA 232 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L + +P I+ S+ + + D ++ ++ T + T+ E +K Sbjct: 233 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGE---AEK 289 Query: 260 NINQVSKDTTNP 271 ++ K+ P Sbjct: 290 WFDKWFKNPIPP 301 >gi|121606347|ref|YP_983676.1| extracellular solute-binding protein [Polaromonas naphthalenivorans CJ2] gi|120595316|gb|ABM38755.1| amino acid ABC transporter substrate-binding protein, PAAT family [Polaromonas naphthalenivorans CJ2] Length = 299 Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats. Identities = 60/295 (20%), Positives = 122/295 (41%), Gaps = 10/295 (3%) Query: 4 DFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 F ++ L L +L + A + +K G + G+ + +G + G+ V+ Sbjct: 2 KFKIATLTLALLASGAVFAQASDTVAKVKASGVVTMGVRDSSGALSYTLGDGKYVGYHVE 61 Query: 63 FCRALSSAIF---DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 C+ + + + +++Y P+ ++ R +Q+ +DI +T R + Sbjct: 62 ICQRILANLEKAAGRKLEVKYQPVTSQNRIPLVQNGTVDIECGSTTNNATRAKDVAFLH- 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 T+ + + GI+SV+QL+G ++ GTT+ TL +A N+ ++ I + Sbjct: 121 -TTFVEEVRIAVKTSSGITSVAQLNGKNVATTTGTTSVQTLRRNERATNVNFNEIFGKDH 179 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + + R DA+ D S L + P++ I+ +++S P+A I + D Sbjct: 180 SDSFLLLESGRADAFVMDGSILAGNIASAKNPADFKIVGEVLSVEPIAIMIRKDDAGLKK 239 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKD 294 I T ++ + EL K ++ P R +G+ S + A D Sbjct: 240 IGDDTINGLIKSGEL---AKLYDKWFMQPIPPKGTR-VGLPASESTKAAWATPND 290 >gi|104784168|ref|YP_610666.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas entomophila L48] gi|95113155|emb|CAK17883.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas entomophila L48] Length = 290 Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats. Identities = 61/253 (24%), Positives = 110/253 (43%), Gaps = 17/253 (6%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L IK R L G+ T F V +G + GFD D R + + D +K++++ + Sbjct: 39 SYLETIKARDKLIVGVFTDKPPFGFVDESGRYVGFDTDIGRRFAKELLGDENKVEFVAVE 98 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 R LQS ++D++ N T R+ ++ I+ + + L+ Sbjct: 99 PASRIPFLQSDKVDLILANMTVTPERKEAVDF--TNPNLRVAVQAIVADGSPVQKLDDLA 156 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 +I V GTT ++ L ++ + + FE+ E AA + R +AY D L++ Sbjct: 157 DKTIIVTTGTTADIWLT----KNHPDWKLLKFEKNTESLAALASGRGEAYAQDNLILFSW 212 Query: 205 KLTNDRPSEHVILPDIISKS-PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 N + +LP ++ + P+APA+ +G+TE + W + + E K +Q Sbjct: 213 AKQNPG---YRVLPQLLGEEAPIAPAVKKGNTELRD---WVNAELAKLGEEKFLLKLYDQ 266 Query: 264 VSK----DTTNPD 272 + D T P+ Sbjct: 267 YVRKELSDDTKPE 279 >gi|300996649|ref|ZP_07181507.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 200-1] gi|300304478|gb|EFJ58998.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 200-1] Length = 325 Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats. Identities = 47/252 (18%), Positives = 93/252 (36%), Gaps = 9/252 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQ 79 S L I K G + G V F+ G+ D+ A+ A+ +K ++ Sbjct: 53 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 112 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T R+ + G + K I Sbjct: 113 LIPITSQNRIPLLQNGTFDFECGSTTNNAERQKQAAF--SDTIFVVGTRLLTKKGGDIKD 170 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L G ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 171 FADLKGKAVVVTSGTTSEVFLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 230 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L + +P I+ S+ + + D ++ ++ T + T+ E +K Sbjct: 231 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGE---AEK 287 Query: 260 NINQVSKDTTNP 271 ++ K+ P Sbjct: 288 WFDKWFKNPIPP 299 >gi|262278742|ref|ZP_06056527.1| ArtI protein [Acinetobacter calcoaceticus RUH2202] gi|262259093|gb|EEY77826.1| ArtI protein [Acinetobacter calcoaceticus RUH2202] Length = 286 Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats. Identities = 68/288 (23%), Positives = 123/288 (42%), Gaps = 23/288 (7%) Query: 1 MYK----DFFVSILCLIILFFT----------SFSTNASILGDIKKRGFLKCGINTGLVG 46 M+K SI +L S + L +KK G L+ + Sbjct: 1 MFKRNSIKILSSIAVAGVLLTACSKTPSTEQASNTQEDQSLEQVKKNGVLRVAVFADDPP 60 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F V + G+ +GFDV + ++ + D K++++ A R L+S + D++ Sbjct: 61 FGYVDSAGNNQGFDVALAKRVTKDLLGDEKKVEFIVTEASNRVEFLKSNRADVVFATFTV 120 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T R+ + A G + K K I+ ++QL G ++ V GT+++ YF Sbjct: 121 TPERKEVVDFAE--PYLKGAFGIVSPKAKPITDIAQLEGKTLIVNKGTSSDT----YFTK 174 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 H K + + FER + A R DA + D + YAL PS + I + + Sbjct: 175 HYPKVNLLKFERNSDAFKALTDGRGDAISQDST--YALAWAAKNPSYVAGIQSIGDQEFI 232 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSKDTTNPDV 273 APA+ +G+T+ N ++ + T+ E+ I + + + ++ NP+V Sbjct: 233 APAVKKGNTQLLNWLNTEIKQLRTSGEIKKIYDETLKPIYGESVNPNV 280 >gi|293608419|ref|ZP_06690722.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292828992|gb|EFF87354.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 286 Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats. Identities = 68/288 (23%), Positives = 124/288 (43%), Gaps = 23/288 (7%) Query: 1 MYK----DFFVSILCLIILFFT---------SFSTNAS-ILGDIKKRGFLKCGINTGLVG 46 M+K S+ +L + + A L +KK G L+ + Sbjct: 1 MFKRNSIKILSSLAVAGVLLTACSKTPSTEQAGNAQADHSLEQVKKNGVLRVAVFADDPP 60 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F V + G+ +GFDV + ++ + D K++++ A R L+S + D++ Sbjct: 61 FGFVDSAGNNQGFDVALAKRVTKDLLGDEKKVEFIVTEASNRVEFLKSNRADVVFATFTV 120 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T R+ + A G + K K I+ ++QL G ++ V GT+++ YF Sbjct: 121 TPERKEVVDFAE--PYLKGAFGIVSPKAKPITDIAQLEGKTLIVNKGTSSDT----YFTK 174 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 H K + + FER + A R DA + D + YAL PS + I + + Sbjct: 175 HYPKVNLLKFERNSDAFKALTDGRGDAISQDST--YALAWAAKNPSYVAGIQSIGDQEFI 232 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSKDTTNPDV 273 APA+ +G+T+ N ++ + T+ E+ I + + + D+ NP+V Sbjct: 233 APAVKKGNTQLLNWLNTEIKQLRTSGEIKKIYDETLKPIYGDSVNPNV 280 >gi|319408772|emb|CBI82429.1| amino-acid ABC transporter binding protein [Bartonella schoenbuchensis R1] Length = 302 Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats. Identities = 58/274 (21%), Positives = 104/274 (37%), Gaps = 8/274 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++I + L IK G + G+ +G A NG + GF Sbjct: 1 MKKSLLAFSAAIVIGLTSMVQAQNDTLEKIKTTGEITLGVRESSIGLAYAIGNGKYTGFH 60 Query: 61 VDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 + + I KI YLP+ ++ R LQ+ D +T R A Sbjct: 61 TEMAEYIIDDISKKIGQSIKIHYLPITSQNRIPLLQNGTYDFECGSTTNDSSRNKEAAFA 120 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 TY + + K GI S+ L+G ++ GTT+ + +A N+ + + + Sbjct: 121 --YTTYVEEVRIAVKKNSGIKSIEDLNGKTVATTTGTTSVQLIRKNKRAKNINFKVVTGK 178 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + + R DA+ D S L + PS+++IL ++S P+A + D Sbjct: 179 DHGDSFLLLESGRADAFVMDASILSGHISKSKNPSDYIILDTVLSIEPIACMLRLNDKNL 238 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 ++ + + + G +K N+ + P Sbjct: 239 EQEINNSIMRQI---KDGSLEKLYNKWFMEPIPP 269 >gi|157160143|ref|YP_001457461.1| glutamate and aspartate transporter subunit [Escherichia coli HS] gi|260853906|ref|YP_003227797.1| periplasmic-binding component GltI [Escherichia coli O26:H11 str. 11368] gi|312970730|ref|ZP_07784911.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli 1827-70] gi|331667009|ref|ZP_08367883.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli TA271] gi|157065823|gb|ABV05078.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli HS] gi|257752555|dbj|BAI24057.1| periplasmic-binding component GltI [Escherichia coli O26:H11 str. 11368] gi|310337379|gb|EFQ02517.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli 1827-70] gi|320198220|gb|EFW72824.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Escherichia coli EC4100B] gi|323153620|gb|EFZ39868.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli EPECa14] gi|331066233|gb|EGI38117.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli TA271] Length = 302 Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats. Identities = 47/257 (18%), Positives = 95/257 (36%), Gaps = 9/257 (3%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK- 77 + S L I K G + G V F+ G+ D+ A+ A+ +K Sbjct: 25 AAPVAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKP 84 Query: 78 ---IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 ++ +P+ ++ R LQ+ D +T + R+ + G + K Sbjct: 85 DLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAAF--SDTIFVVGTRLLTKKG 142 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I + L G ++ V +GTT+E+ L + M I + + + R A+ Sbjct: 143 GDIKDFADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAF 202 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D + L + +P I+ S+ + + D ++ ++ T + T+ E Sbjct: 203 MMDDALLAGERAKAKKPDNWDIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGE- 261 Query: 255 GITQKNINQVSKDTTNP 271 +K ++ K+ P Sbjct: 262 --AEKWFDKWFKNPIPP 276 >gi|237752493|ref|ZP_04582973.1| amino-acid ABC transporter periplasmic solute-binding protein [Helicobacter winghamensis ATCC BAA-430] gi|229375982|gb|EEO26073.1| amino-acid ABC transporter periplasmic solute-binding protein [Helicobacter winghamensis ATCC BAA-430] Length = 284 Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats. Identities = 63/266 (23%), Positives = 113/266 (42%), Gaps = 15/266 (5%) Query: 4 DFFVSILCLIILFFT---SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 F++I I + ST+ L IK++G + G+ + F V G+ GFD Sbjct: 16 KIFLAIFVAGIFAGCENNTQSTSEDRLAKIKQKGVITIGVFSDKPPFGFVNDKGENDGFD 75 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V R L+ ++ D SK+++ + A R L+S ++D++ N T R + A Sbjct: 76 VYVARELAKSLLGDASKVKFELVEAASRVEFLKSGKVDLIMANFTKTPERAEVVDFA--- 132 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y I+ K+ I V+ L G + V GTT + YF ++ + + F++ Sbjct: 133 TPYMKVALGIVSKEGAIKDVADLKGKKLIVNKGTTADF----YFTKNHPEIELVKFDQNT 188 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E A + R DA D L+A + P+ V + + ++ +APA+ +GD Sbjct: 189 EAFLALKDGRGDALAHDNLLLFAWAK--ENPNFAVAISKLGNEDVIAPAVKKGDKALLE- 245 Query: 241 VSWTHYAMVTAEELGITQKNINQVSK 266 W + + E G ++ + Sbjct: 246 --WVNLEIKKLNENGFMKEAYAKTLA 269 >gi|218699020|ref|YP_002406649.1| glutamate and aspartate transporter subunit [Escherichia coli IAI39] gi|256020607|ref|ZP_05434472.1| glutamate and aspartate transporter subunit [Shigella sp. D9] gi|293408781|ref|ZP_06652620.1| glutamate and aspartate transporter subunit [Escherichia coli B354] gi|218369006|emb|CAR16760.1| glutamate and aspartate transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli IAI39] gi|284920455|emb|CBG33516.1| glutamate/aspartate ABC transporter, substrate-binding protein [Escherichia coli 042] gi|291471959|gb|EFF14442.1| glutamate and aspartate transporter subunit [Escherichia coli B354] gi|323191287|gb|EFZ76551.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli RN587/1] gi|323976362|gb|EGB71452.1| extracellular solute-binding protein 3 [Escherichia coli TW10509] Length = 302 Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats. Identities = 47/252 (18%), Positives = 94/252 (37%), Gaps = 9/252 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQ 79 S L I K G + G V F+ G+ D+ A+ A+ +K ++ Sbjct: 30 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ + G + K I Sbjct: 90 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAAF--SDTIFVVGTRLLTKKGGDIKD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L G ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 148 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 207 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L + +P I+ S+ + + D ++ ++ T + T+ E +K Sbjct: 208 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGE---AEK 264 Query: 260 NINQVSKDTTNP 271 ++ K+ P Sbjct: 265 WFDKWFKNPIPP 276 >gi|194439879|ref|ZP_03071942.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli 101-1] gi|253774361|ref|YP_003037192.1| glutamate and aspartate transporter subunit [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254160734|ref|YP_003043842.1| glutamate and aspartate transporter subunit [Escherichia coli B str. REL606] gi|194421173|gb|EDX37197.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli 101-1] gi|242376428|emb|CAQ31130.1| gltI, subunit of GltIJKL glutamate ABC transporter [Escherichia coli BL21(DE3)] gi|253325405|gb|ACT30007.1| extracellular solute-binding protein family 3 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972635|gb|ACT38306.1| glutamate and aspartate transporter subunit [Escherichia coli B str. REL606] gi|253976829|gb|ACT42499.1| glutamate and aspartate transporter subunit [Escherichia coli BL21(DE3)] gi|323963223|gb|EGB58791.1| extracellular solute-binding protein 3 [Escherichia coli H489] Length = 302 Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats. Identities = 47/252 (18%), Positives = 94/252 (37%), Gaps = 9/252 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQ 79 S L I K G + G V F+ G+ D+ A+ A+ +K ++ Sbjct: 30 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ + G + K I Sbjct: 90 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAAF--SDTIFVVGTRLLTKKGGDIKD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L G ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 148 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 207 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L + +P I+ S+ + + D ++ ++ T + T+ E +K Sbjct: 208 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGE---AEK 264 Query: 260 NINQVSKDTTNP 271 ++ K+ P Sbjct: 265 WFDKWFKNPIPP 276 >gi|26246629|ref|NP_752669.1| glutamate and aspartate transporter subunit [Escherichia coli CFT073] gi|91209696|ref|YP_539682.1| glutamate and aspartate transporter subunit [Escherichia coli UTI89] gi|117622864|ref|YP_851777.1| glutamate and aspartate transporter subunit [Escherichia coli APEC O1] gi|227884372|ref|ZP_04002177.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli 83972] gi|237707378|ref|ZP_04537859.1| glutamate/aspartate periplasmic binding protein [Escherichia sp. 3_2_53FAA] gi|300989986|ref|ZP_07179062.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 45-1] gi|301049845|ref|ZP_07196784.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 185-1] gi|26107028|gb|AAN79212.1|AE016757_116 Glutamate/aspartate Periplasmic binding protein precursor [Escherichia coli CFT073] gi|91071270|gb|ABE06151.1| glutamate/aspartate periplasmic binding protein precursor [Escherichia coli UTI89] gi|115511988|gb|ABJ00063.1| Glutamate/aspartate Periplasmic binding protein precursor [Escherichia coli APEC O1] gi|226898588|gb|EEH84847.1| glutamate/aspartate periplasmic binding protein [Escherichia sp. 3_2_53FAA] gi|227838458|gb|EEJ48924.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli 83972] gi|300298397|gb|EFJ54782.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 185-1] gi|300407261|gb|EFJ90799.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 45-1] gi|315287098|gb|EFU46512.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 110-3] gi|315292077|gb|EFU51429.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 153-1] gi|324006272|gb|EGB75491.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 57-2] gi|324010380|gb|EGB79599.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 60-1] Length = 325 Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats. Identities = 47/252 (18%), Positives = 93/252 (36%), Gaps = 9/252 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQ 79 S L I K G + G V F+ G+ D+ A+ A+ +K ++ Sbjct: 53 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 112 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T R+ + G + K I Sbjct: 113 LIPITSQNRIPLLQNGTFDFECGSTTNNAERQKQAAF--SDTIFVVGTRLLTKKGGDIKD 170 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L G ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 171 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 230 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L + +P I+ S+ + + D ++ ++ T + T+ E +K Sbjct: 231 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGE---AEK 287 Query: 260 NINQVSKDTTNP 271 ++ K+ P Sbjct: 288 WFDKWFKNPIPP 299 >gi|261822382|ref|YP_003260488.1| glutamate and aspartate transporter subunit [Pectobacterium wasabiae WPP163] gi|261606395|gb|ACX88881.1| extracellular solute-binding protein family 3 [Pectobacterium wasabiae WPP163] Length = 298 Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats. Identities = 50/275 (18%), Positives = 96/275 (34%), Gaps = 9/275 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K IL A L +K G + G V F+ G+ Sbjct: 3 MRKLALSLILLGTAASAAQAEDLAGTLKKVKDNGVIVIGHRESSVPFSYYDNTQKVVGYS 62 Query: 61 VDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 + + AI +++ LP+ ++ R LQ+ D+ +T L R+ Sbjct: 63 QAYSDKIVDAIKKKLDAPNLQVKLLPITSQNRIPLLQNGTFDLECGSTTNNLERQKQAAF 122 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + G + K G+ L+G ++ V +GTT+E+ L + +K I Sbjct: 123 --SNTIFVVGTRLLTKKDSGVKDFPDLAGKTVVVTSGTTSEVLLNKLNEEKQLKMRIISA 180 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + + R A+ D + L + + I+ S+ + + D + Sbjct: 181 KDHGDSFRTLESGRAVAFMMDDALLAGERAKAKSADQWDIVGKAQSEEAYGCMLRKDDPQ 240 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + +V T + T+ E +K ++ K P Sbjct: 241 FKKLVDDTIAEVQTSGE---AEKWFDRWFKQPIPP 272 >gi|326789993|ref|YP_004307814.1| ABC transporter periplasmic protein [Clostridium lentocellum DSM 5427] gi|326540757|gb|ADZ82616.1| ABC-type transporter, periplasmic subunit family 3 [Clostridium lentocellum DSM 5427] Length = 288 Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats. Identities = 64/286 (22%), Positives = 119/286 (41%), Gaps = 22/286 (7%) Query: 1 MYKDF-FVSILCLIILFFTSFST------------NASILGDIKKRGFLKCGINTGLVGF 47 M + +SIL +++ S + +AS + IK+RG ++ G+ + F Sbjct: 1 MKQRLRVLSILVGLLVILGSLTACSNNKQASSNGESASGIEAIKERGKIRIGVFSDKPPF 60 Query: 48 AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 V NG +G+DV F + ++ + D + ++++ + A R LQS ++DI+ N T Sbjct: 61 GYVDENGVNQGYDVYFAKRIAKDLLGDENAVEFVLVEAASRVEYLQSGKVDIILANFTVT 120 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 R + A G + I+ VSQL G + V GTT E YF + Sbjct: 121 KDRAEVVDFAL--PYMKVALGVVSPDGAIITDVSQLEGKQLIVNKGTTAET----YFTEN 174 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 + ++ E A + R A D + ++A + P + + +A Sbjct: 175 YPNIELLKYDENTEAFNALKDGRGAALAHDNTLVFAWAIQ--NPGFTTGIESLGGLDTIA 232 Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSKDTTNPD 272 PA+ +G+TE N ++ A+ + + V D+ +P+ Sbjct: 233 PAVQKGNTELLNWINDEIKALAKENFFHSAYEATLLPVYGDSVDPE 278 >gi|300692064|ref|YP_003753059.1| glutamate/aspartate transport protein (ABC superfamily, peri_bind) high affinity periplasmic solute-binding protein [Ralstonia solanacearum PSI07] gi|299079124|emb|CBJ51791.1| glutamate/aspartate transport protein (ABC superfamily, peri_bind) high affinity periplasmic solute-binding protein [Ralstonia solanacearum PSI07] Length = 303 Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats. Identities = 49/277 (17%), Positives = 103/277 (37%), Gaps = 12/277 (4%) Query: 7 VSILCLIILFFTSFSTNAS---ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 ++LC + F + AS +L I+ G ++ F+ A+ G+ VD Sbjct: 11 AALLCSSLSIFAPGTALASATPVLDRIRDTGTVRIAHRESAAPFSYYDADKKPIGYAVDL 70 Query: 64 CRALSSAI----FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 C + + K+QY+ + R + + D+ T RE +AF Sbjct: 71 CLRVVDKLRAELKRPDLKVQYVLVTPSTRIPTIMEGKADLECSTTTNN--RERREQVAFT 128 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G ++ GI L ++ + GTT+ + + + + Sbjct: 129 IPHYIAGIRMLVKTSSGIHKWDDLRNKTVVLTKGTTSVTEMRKLNDSRVLHMKIEEVKEH 188 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A + + DA+ D LY+ + P ++ ++ D+++ P A + + D E+ Sbjct: 189 AEAFAMVESGKADAFAMDDVQLYSFRANAKHPMDYTVVGDMMTVEPYAIMLSKSDPEFKR 248 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRF 276 +V A++ + +K + + P+ + Sbjct: 249 VVDRAMTAIILDYD---AEKLYKKWFQQPIPPNSAKL 282 >gi|152985853|ref|YP_001351140.1| putative ABC transporter binding protein subunit [Pseudomonas aeruginosa PA7] gi|150961011|gb|ABR83036.1| probable binding protein component of ABC transporter [Pseudomonas aeruginosa PA7] Length = 299 Score = 212 bits (541), Expect = 5e-53, Method: Composition-based stats. Identities = 54/271 (19%), Positives = 111/271 (40%), Gaps = 11/271 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTN---ASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWK 57 K S L + + + L + G + G V F+ + +G Sbjct: 1 MKTLVSSTLAFSLSLAIGAAQAEELSGTLKKVADNGTITLGYRDASVPFSYLGDNSGRPM 60 Query: 58 GFDVDFCRALSSAI---FDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ VD + + P +++Y + ++ R +Q+ +D+ +T T R+ Sbjct: 61 GYSVDLAGKVVERLKATLGKPELRVKYNLVTSQTRIPLVQNGTVDLECGSTGVTAERQKQ 120 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + ++ I Y GQ + K GI+ L G ++ AGTT E L +Y H + + Sbjct: 121 VAFSYGFI-YVKGQ-LLTRKDSGIAHFDDLKGRNVVTTAGTTNERYLKNYNAEHKLGMNV 178 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + + E ++ R A+ D + LY + +P + V++ + S+ + + + Sbjct: 179 VSAKDHGEAFQMLQSGRAVAFYMDDALLYGERAKARQPHDWVVVGEPQSREIYSCMVRKD 238 Query: 234 DTEWYNIVSWTHYAMVTAEEL-GITQKNINQ 263 D ++ +V+ T + + E+ GI Q+ Q Sbjct: 239 DPQFLALVNETLAGLYRSGEIQGIYQRWFQQ 269 >gi|319899106|ref|YP_004159199.1| amino-acid ABC transporter binding protein [Bartonella clarridgeiae 73] gi|319403070|emb|CBI76625.1| amino-acid ABC transporter binding protein [Bartonella clarridgeiae 73] Length = 301 Score = 212 bits (541), Expect = 5e-53, Method: Composition-based stats. Identities = 58/274 (21%), Positives = 107/274 (39%), Gaps = 9/274 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + I+ + + + L IKK G + G+ G A NG + GF Sbjct: 1 MRKSLLIFIVVISMGLTSIAHATNDTLEKIKKTGEITLGVRESS-GLAYALGNGKYTGFH 59 Query: 61 VDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 + + I P K+ YLP+ ++ R L++ D +T R A Sbjct: 60 TEMAERIIDDISKKIGKPIKVNYLPITSQNRIPLLKNGTYDFECGSTTNDSARSKEAAFA 119 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 TY + ++ K GI S+ L+G ++ GTT + + N+ + + + Sbjct: 120 --YTTYVESVKIVVKKNSGIKSIDDLNGKTVATTTGTTAVQLIRKNKRQKNIHFKVVNGK 177 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + + R DA+ D S L A + PS+++IL +S P+A + D + Sbjct: 178 DHGDSFLLLESGRADAFVMDTSILSANIAKSKNPSDYIILDTTLSVEPIACMLRLNDKNF 237 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 +++ + + L +K N+ + P Sbjct: 238 EQVINDSIVRQINDSSL---EKLYNKWFMEPIPP 268 >gi|291085702|ref|ZP_06353786.2| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Citrobacter youngae ATCC 29220] gi|291070188|gb|EFE08297.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Citrobacter youngae ATCC 29220] Length = 317 Score = 212 bits (541), Expect = 5e-53, Method: Composition-based stats. Identities = 48/252 (19%), Positives = 93/252 (36%), Gaps = 9/252 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQ 79 S L I K G + G V F+ G+ D+ A+ A+ +K ++ Sbjct: 45 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 104 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ + G + K I Sbjct: 105 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAAF--SDTIFVVGTRLLAKKGGDIKD 162 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L G ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 163 FADLKGKAVVVTSGTTSEVLLHKLNEEQKMDMRIISAKDHGDSFRTLESGRAVAFMMDDA 222 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L + +P I+ S+ + + D E+ ++ T A+ G +K Sbjct: 223 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPEFKKLMDDTI---ANAQTSGEAEK 279 Query: 260 NINQVSKDTTNP 271 ++ K+ P Sbjct: 280 WFDKWFKNPIPP 291 >gi|261400798|ref|ZP_05986923.1| CjaA protein [Neisseria lactamica ATCC 23970] gi|269209400|gb|EEZ75855.1| CjaA protein [Neisseria lactamica ATCC 23970] Length = 284 Score = 212 bits (541), Expect = 5e-53, Method: Composition-based stats. Identities = 63/281 (22%), Positives = 121/281 (43%), Gaps = 18/281 (6%) Query: 2 YKDFFVSILCLIILFF---------TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 +K S + L +S S+ A+ + IK++G ++ G+ F V A Sbjct: 7 FKALLASAAIAVGLTACGGGSGDAQSSQSSGAATVAAIKEKGVIRIGVFGDKPPFGYVDA 66 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 NG +GFDV+ + L+ + P K++++ A R ++S ++D++ N T R Sbjct: 67 NGKNQGFDVEIAKDLAKDLLGSPDKVEFVLTEAANRVEYVRSGKVDLILANFTKTPERAE 126 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 ++ A G + K K I+ ++QL ++ V GTT + +F + + Sbjct: 127 AVDFAD--PYMKVALGVVSPKGKPITDIAQLKDQTLLVNKGTTADA----FFTKSHPEVK 180 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + F++ E A + R A D + L+A + P V + ++ +APA+ + Sbjct: 181 LLKFDQNTETFDALKDGRGAALAHDNALLWAWAK--ENPDFEVAIGNLGPAEFIAPAVQK 238 Query: 233 GDTEWYNIVSWTHYAMVTAEELG-ITQKNINQVSKDTTNPD 272 G+ + N V+ AM L +K + V + P+ Sbjct: 239 GNADLLNWVNGEIAAMKKDGRLKAAYEKTLLPVYGEKVKPE 279 >gi|261377618|ref|ZP_05982191.1| CjaA protein [Neisseria cinerea ATCC 14685] gi|269146371|gb|EEZ72789.1| CjaA protein [Neisseria cinerea ATCC 14685] Length = 284 Score = 212 bits (541), Expect = 5e-53, Method: Composition-based stats. Identities = 64/281 (22%), Positives = 122/281 (43%), Gaps = 18/281 (6%) Query: 2 YKDFFVSILCLIILFF---------TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 +K S + L +S S A+ + IK++G ++ G+ F V A Sbjct: 7 FKALLASAAIAVGLTACGGDSGDTQSSQSGGAATVASIKEKGVIRIGVFGDKPPFGYVDA 66 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 NG +GFDV+ + L+ + P K++++ A R ++S ++D++ N T R Sbjct: 67 NGKNQGFDVEIAKDLAKDLLGSPDKVEFVLTEAANRVEYVRSGKVDLILANFTKTPERAE 126 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 ++ A G + K K I+ ++QL ++ V GTT + +F + + Sbjct: 127 AVDFAD--PYMKVALGVVSPKDKPITDIAQLKDQTLLVNKGTTADA----FFTKSHPEVK 180 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + F++ E A + R A D + L+A + P+ V + ++ +APA+ + Sbjct: 181 LLKFDQNTETFDALKDGRGVALAHDNALLWAWAK--ENPNFEVAIGNLGPAEFIAPAVQK 238 Query: 233 GDTEWYNIVSWTHYAMVTAEELG-ITQKNINQVSKDTTNPD 272 G+T+ N V+ AM L +K + V + P+ Sbjct: 239 GNTDLLNWVNGEIAAMKKDGRLKAAYEKTLLPVYGEKVKPE 279 >gi|170293734|gb|ACB12919.1| glutamate-sensitive fluorescent reporter [synthetic construct] Length = 841 Score = 212 bits (541), Expect = 5e-53, Method: Composition-based stats. Identities = 48/264 (18%), Positives = 99/264 (37%), Gaps = 9/264 (3%) Query: 12 LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI 71 +++L F + + S L I K G + G V F+ G+ D+ A+ A+ Sbjct: 256 MVLLEFVTAARMLSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAV 315 Query: 72 FDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 +K ++ +P+ + R LQ+ D +T + R+ + G Sbjct: 316 KKKLNKPDLQVKLIPITTQNRIPLLQNGTFDFECGSTTNNVERQKQAAF--SDTIFVVGT 373 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 + K I + L ++ V +GTT+E+ L + M I + + Sbjct: 374 RLLTKKGGDIKDFANLKDKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLE 433 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 + R A+ D + L + +P I+ S+ + + D ++ ++ T Sbjct: 434 SGRAVAFMMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQ 493 Query: 248 MVTAEELGITQKNINQVSKDTTNP 271 + T+ E +K ++ K+ P Sbjct: 494 VQTSGE---AEKWFDKWFKNPIPP 514 >gi|238026228|ref|YP_002910459.1| glutamate/aspartate ABC transporter periplasmic glutamate/aspartate-binding protein [Burkholderia glumae BGR1] gi|237875422|gb|ACR27755.1| Glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia glumae BGR1] Length = 297 Score = 212 bits (541), Expect = 5e-53, Method: Composition-based stats. Identities = 50/260 (19%), Positives = 93/260 (35%), Gaps = 9/260 (3%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 + + A L IK G + G + F+ N G+ DF + A+ Sbjct: 17 AGGAIAQEAGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVIGYARDFQMRIVDAVKKKL 76 Query: 76 S----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131 + + + +P+ ++ R +Q+ +DI +T L R+ + G + Sbjct: 77 NLPNLQTKNIPVTSQNRIPLVQNGTVDIECGSTTNNLDRQKQAAF--STTYFVIGTRLMT 134 Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191 K GI + L G ++ AGTT+E L M + I + E R Sbjct: 135 SKDSGIKDFADLKGKTVVTTAGTTSERLLRAMNNDKQMGMNIISAKDHGESFQTLETGRA 194 Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 A+ D + L + +P VI+ S+ + + D + +V A+ Sbjct: 195 VAFMMDDALLAGERAKAKKPDNWVIVGTPQSEEAYGCMMRKDDPAFKKVVDD---AITET 251 Query: 252 EELGITQKNINQVSKDTTNP 271 E+ G K + ++ P Sbjct: 252 EKSGEAAKLYAKWFENPIPP 271 >gi|218688471|ref|YP_002396683.1| glutamate and aspartate transporter subunit [Escherichia coli ED1a] gi|218426035|emb|CAR06852.1| glutamate and aspartate transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli ED1a] Length = 302 Score = 212 bits (541), Expect = 5e-53, Method: Composition-based stats. Identities = 47/252 (18%), Positives = 93/252 (36%), Gaps = 9/252 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQ 79 S L I K G + G V F+ G+ D+ A+ A+ +K ++ Sbjct: 30 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T R+ + G + K I Sbjct: 90 LIPITSQNRIPLLQNGTFDFECGSTTNNAERQKQAAF--SNTIFVVGTRLLTKKGGDIKD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L G ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 148 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 207 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L + +P I+ S+ + + D ++ ++ T + T+ E +K Sbjct: 208 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGE---AEK 264 Query: 260 NINQVSKDTTNP 271 ++ K+ P Sbjct: 265 WFDKWFKNPIPP 276 >gi|75765505|pdb|1XT8|A Chain A, Crystal Structure Of Cysteine-Binding Protein From Campylobacter Jejuni At 2.0 A Resolution gi|75765506|pdb|1XT8|B Chain B, Crystal Structure Of Cysteine-Binding Protein From Campylobacter Jejuni At 2.0 A Resolution Length = 292 Score = 212 bits (541), Expect = 5e-53, Method: Composition-based stats. Identities = 57/250 (22%), Positives = 110/250 (44%), Gaps = 11/250 (4%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 + L IK+ G ++ G+ F V G+ +G+D+ + ++ +F D +K+Q++ + Sbjct: 35 NSLDKIKQNGVVRIGVFGDKPPFGYVDEKGNNQGYDIALAKRIAKELFGDENKVQFVLVE 94 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 A R L+S ++DI+ N T R + + F G + K I+SV L Sbjct: 95 AANRVEFLKSNKVDIILANFTQTPQR--AEQVDFCSPYMKVALGVAVPKDSNITSVEDLK 152 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 ++ + GTT + YF + + +++ E AA R DA + D + L+A Sbjct: 153 DKTLLLNKGTTADA----YFTQNYPNIKTLKYDQNTETFAALMDKRGDALSHDNTLLFAW 208 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 D P + + ++ +K +APA+ +GD E + ++ + K ++ Sbjct: 209 VK--DHPDFKMGIKELGNKDVIAPAVKKGDKELKEFID---NLIIKLGQEQFFHKAYDET 263 Query: 265 SKDTTNPDVQ 274 K DV+ Sbjct: 264 LKAHFGDDVK 273 >gi|331656675|ref|ZP_08357637.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli TA206] gi|331054923|gb|EGI26932.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli TA206] Length = 302 Score = 212 bits (541), Expect = 5e-53, Method: Composition-based stats. Identities = 47/252 (18%), Positives = 94/252 (37%), Gaps = 9/252 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQ 79 S L I K G + G V F+ G+ D+ A+ A+ +K ++ Sbjct: 30 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIIEAVKKKLNKPDLQVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ + G + K I Sbjct: 90 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAAF--SDTIFVVGTRLLTKKGGDIKD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L G ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 148 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 207 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L + +P I+ S+ + + D ++ ++ T + T+ E +K Sbjct: 208 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGE---AEK 264 Query: 260 NINQVSKDTTNP 271 ++ K+ P Sbjct: 265 WFDKWFKNPIPP 276 >gi|312171723|emb|CBX79981.1| putative glutamate/aspartate ABC transport system, periplasmic component [Erwinia amylovora ATCC BAA-2158] Length = 309 Score = 212 bits (541), Expect = 6e-53, Method: Composition-based stats. Identities = 59/287 (20%), Positives = 105/287 (36%), Gaps = 24/287 (8%) Query: 4 DFFVSILCLIILFFTSFSTNAS---------------ILGDIKKRGFLKCGINTGLVGFA 48 F LCL + S +A L I K G + G V F+ Sbjct: 2 KFRKLGLCLALAGIASGIAHAEDAKAPATADAQQQTHTLEKIAKNGVIVVGHRESSVPFS 61 Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNT 104 G+ D+ A+ +AI +K ++ LP+ ++ R LQ+ D +T Sbjct: 62 YYDNQQKVVGYSQDYSDAIVAAIKKKLNKPDLQVKMLPVTSQNRIPLLQNGTYDFECGST 121 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164 + R+ + + G ++ K I + L G ++ V +GTT+E+ L Sbjct: 122 TNNIERQKQASFSNSI--FVVGTRLLVKKGGAIKDFADLKGKTVVVTSGTTSEILLNKLN 179 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 M + + + + R A+ D + L + +PSE IL S+ Sbjct: 180 DEQKMGMRIVSAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPSEWEILGTPQSRE 239 Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + +GD+E+ ++ T V A+ G K ++ K P Sbjct: 240 AYGCMLRKGDSEFKKLMDDTI---VQAQTSGEAAKWFDKWFKQPVPP 283 >gi|221197899|ref|ZP_03570945.1| extracellular solute-binding protein, family 3 [Burkholderia multivorans CGD2M] gi|221204543|ref|ZP_03577560.1| extracellular solute-binding protein, family 3 [Burkholderia multivorans CGD2] gi|221175400|gb|EEE07830.1| extracellular solute-binding protein, family 3 [Burkholderia multivorans CGD2] gi|221181831|gb|EEE14232.1| extracellular solute-binding protein, family 3 [Burkholderia multivorans CGD2M] Length = 338 Score = 212 bits (541), Expect = 6e-53, Method: Composition-based stats. Identities = 70/278 (25%), Positives = 102/278 (36%), Gaps = 14/278 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW-KGF 59 M L + L + A L DIKK G L+ F V A + G Sbjct: 68 MKIHTLAKALVAVALIAAGTAAQADRLDDIKKAGVLRVATFDSNPPFGYVDAKTNRIVGL 127 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD+ +AL+ + K+Q P N R L S ++D++ N T R + + Sbjct: 128 DVDYAKALADKLG---VKLQLQPTNPANRIPFLTSGKVDLVLANFTITEERAKQVDFS-- 182 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I YF + KK + S QL+G I GTT E+TL + F + ++ Sbjct: 183 -IPYFSSGQQFLAKKGVLKSADQLNGLRIGADKGTTNEITLREKFPKA----TIVAYDDT 237 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AA RA A T D L L + I P IS + + +G+T Sbjct: 238 PFAFAALRAGNVQAITQDGPKLIGLLANVPDKQNYEIPPFTISNDYMGVGVPKGETRLLG 297 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277 V+ T E G + + TT + R Sbjct: 298 FVNDTLKG---LEANGRAAQIYDAWFGPTTKTPLARIF 332 >gi|32266237|ref|NP_860269.1| amino-acid ABC transporter periplasmic solute-binding protein [Helicobacter hepaticus ATCC 51449] gi|32262287|gb|AAP77335.1| amino-acid ABC transporter periplasmic solute-binding protein [Helicobacter hepaticus ATCC 51449] Length = 275 Score = 212 bits (540), Expect = 6e-53, Method: Composition-based stats. Identities = 59/272 (21%), Positives = 111/272 (40%), Gaps = 18/272 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI------LGDIKKRGFLKCGINTGLVGFAEVKANG 54 M K + ++ ++ N S L +IK++G ++ G+ + F + G Sbjct: 1 MKKLLLALFGVVFMIGLSACGDNQSTKESKNALEEIKQKGVVRIGVFSDKPPFGFINEKG 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 GFDV + ++ + D +K++++ A R L+S ++DI+ N T RE + Sbjct: 61 QNDGFDVYIAKRIAKDLLGDENKVEFVLTEAASRVEFLRSNKVDIIMANFTQTPEREAVV 120 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 A G I I S+ L G + V GTT + +F + + Sbjct: 121 DFA--KPYMKVALGVISP-NGEIKSIDDLKGKKLIVNKGTTADA----FFSKNYPDIELL 173 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +E+ E A + R DA D + L A + N+ +V +P + + +APAI +G+ Sbjct: 174 KYEQNTEAFLALKDKRGDALAHDNTLLLAWAMENE--GFNVGIPTLGEEENIAPAIKKGN 231 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 E +W + + G ++ + Sbjct: 232 IELK---NWLDNEITSLTHEGFMKEAYEKTLA 260 >gi|322833889|ref|YP_004213916.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602] gi|321169090|gb|ADW74789.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602] Length = 298 Score = 212 bits (540), Expect = 6e-53, Method: Composition-based stats. Identities = 51/275 (18%), Positives = 96/275 (34%), Gaps = 11/275 (4%) Query: 3 KDFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + +S+L + + L IK G + G V F+ G+ Sbjct: 4 RKLALSVLLASVTVSSFAHAEELTGTLKKIKDNGVIVVGHRESSVPFSYYNNEQKVVGYS 63 Query: 61 VDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 D+ A+ A+ + +++ +P+ ++ R LQ+ D +T L R+ Sbjct: 64 QDYSDAIVDAVKKKLNLPDLQVKMMPITSQNRIPLLQNGTYDFECGSTTNNLERQQQAAF 123 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + G ++ K I + L G ++ V +GTT+E+ L + + I Sbjct: 124 --SDTIFVIGTRLLVKKGSEIKDFTDLKGKTVVVTSGTTSEVLLNKLNEEKKLDLRIISA 181 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + R A+ D + L + +P I+ SK + + D E Sbjct: 182 KDHGDSFRTLETGRAVAFMMDDALLAGERAKAKKPDNWEIVGTPQSKEAYGCMMRKDDAE 241 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + +V T T+ E G K K P Sbjct: 242 FKKLVDDTIVQAQTSGEAG---KWFETWFKKPIPP 273 >gi|110640877|ref|YP_668605.1| glutamate and aspartate transporter subunit [Escherichia coli 536] gi|191173985|ref|ZP_03035503.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli F11] gi|215485688|ref|YP_002328119.1| glutamate and aspartate transporter subunit [Escherichia coli O127:H6 str. E2348/69] gi|218557586|ref|YP_002390499.1| glutamate and aspartate transporter subunit [Escherichia coli S88] gi|306812920|ref|ZP_07447113.1| glutamate and aspartate transporter subunit [Escherichia coli NC101] gi|312965095|ref|ZP_07779332.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli 2362-75] gi|331682072|ref|ZP_08382696.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli H299] gi|110342469|gb|ABG68706.1| glutamate/aspartate periplasmic binding protein precursor [Escherichia coli 536] gi|190905761|gb|EDV65382.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli F11] gi|215263760|emb|CAS08096.1| glutamate and aspartate transporter subunit [Escherichia coli O127:H6 str. E2348/69] gi|218364355|emb|CAR02030.1| glutamate and aspartate transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli S88] gi|222032408|emb|CAP75147.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli LF82] gi|294492965|gb|ADE91721.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli IHE3034] gi|305853683|gb|EFM54122.1| glutamate and aspartate transporter subunit [Escherichia coli NC101] gi|307552518|gb|ADN45293.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli ABU 83972] gi|307627914|gb|ADN72218.1| glutamate and aspartate transporter subunit [Escherichia coli UM146] gi|312290186|gb|EFR18069.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli 2362-75] gi|312945195|gb|ADR26022.1| glutamate and aspartate transporter subunit [Escherichia coli O83:H1 str. NRG 857C] gi|320194170|gb|EFW68802.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Escherichia coli WV_060327] gi|323952774|gb|EGB48642.1| extracellular solute-binding protein 3 [Escherichia coli H252] gi|323958407|gb|EGB54113.1| extracellular solute-binding protein 3 [Escherichia coli H263] gi|331080751|gb|EGI51925.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli H299] Length = 302 Score = 212 bits (540), Expect = 6e-53, Method: Composition-based stats. Identities = 47/252 (18%), Positives = 93/252 (36%), Gaps = 9/252 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQ 79 S L I K G + G V F+ G+ D+ A+ A+ +K ++ Sbjct: 30 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T R+ + G + K I Sbjct: 90 LIPITSQNRIPLLQNGTFDFECGSTTNNAERQKQAAF--SDTIFVVGTRLLTKKGGDIKD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L G ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 148 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 207 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L + +P I+ S+ + + D ++ ++ T + T+ E +K Sbjct: 208 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGE---AEK 264 Query: 260 NINQVSKDTTNP 271 ++ K+ P Sbjct: 265 WFDKWFKNPIPP 276 >gi|291281605|ref|YP_003498423.1| Glutamate/aspartate periplasmic binding protein [Escherichia coli O55:H7 str. CB9615] gi|290761478|gb|ADD55439.1| Glutamate/aspartate periplasmic binding protein [Escherichia coli O55:H7 str. CB9615] Length = 327 Score = 212 bits (540), Expect = 6e-53, Method: Composition-based stats. Identities = 47/252 (18%), Positives = 94/252 (37%), Gaps = 9/252 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQ 79 S L I K G + G V F+ G+ D+ A+ A+ +K ++ Sbjct: 55 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 114 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ + G + K I Sbjct: 115 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAAF--SDTIFVVGTRLLTKKGGDIKD 172 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L G ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 173 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 232 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L + +P I+ S+ + + D ++ ++ T + T+ E +K Sbjct: 233 LLAGERAKAKKPDNWDIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGE---AEK 289 Query: 260 NINQVSKDTTNP 271 ++ K+ P Sbjct: 290 WFDKWFKNPIPP 301 >gi|311107045|ref|YP_003979898.1| glutamate/aspartate periplasmic-binding protein 2 [Achromobacter xylosoxidans A8] gi|310761734|gb|ADP17183.1| glutamate/aspartate periplasmic-binding protein 2 [Achromobacter xylosoxidans A8] Length = 302 Score = 212 bits (540), Expect = 7e-53, Method: Composition-based stats. Identities = 50/277 (18%), Positives = 98/277 (35%), Gaps = 11/277 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M S+ L I + S L + G + G + F+ N G Sbjct: 1 MALRIKASVAALAIFMAGAASAQQLDGTLKKVADTGTITIGHRETSIPFSYYDGNQKPVG 60 Query: 59 FDVDFCRALSSA----IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + +D C + A + +++YLP+ + R + + ID+ +T TL R+ + Sbjct: 61 YSIDICERIVRAVQTRLKRSDIQVKYLPVTSATRIPLMGNGTIDLECASTSNTLDRQQQV 120 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 T+ G F+ K + +V L G + +GT + + + + + Sbjct: 121 AF--SVTTFVTGNRFLSQKSSKLRTVDDLKGKVVASTSGTANIRQINELNETRGLGMRIV 178 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + E R A+ D LY L +P + + +S P A + + D Sbjct: 179 PVKEHAEGFLMVETGRAAAFVMDDILLYGLIANAKQPDRYEVSDASLSIEPYAIMLRRDD 238 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 ++ +V A+ + E Q ++ + P Sbjct: 239 PQFKALVDDAIKALYASGE---FQALYDRWYRSPLPP 272 >gi|319638911|ref|ZP_07993669.1| ABC transporter [Neisseria mucosa C102] gi|317399815|gb|EFV80478.1| ABC transporter [Neisseria mucosa C102] Length = 284 Score = 212 bits (540), Expect = 7e-53, Method: Composition-based stats. Identities = 65/281 (23%), Positives = 123/281 (43%), Gaps = 18/281 (6%) Query: 2 YKDFFVSILCLIILFF---------TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 +K S + L +S S+ A+ + IK++G ++ G+ F V A Sbjct: 7 FKALLASAAIAVGLTACGGGSGDAQSSQSSGAATVAAIKEKGVIRIGVFGDKPPFGYVDA 66 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 NG +GFDV+ + L+ + P K++++ A R ++S ++D++ N T R Sbjct: 67 NGKNQGFDVEIAKDLAKDLLGSPDKVEFVLTEAANRVEYVRSGKVDLILANFTKTPERAE 126 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 ++ A G + K K I+ V+QL ++ V GTT + +F + + Sbjct: 127 AVDFAD--PYMKVALGVVSSKDKPITDVAQLKDQTLLVNKGTTADA----FFTKSHPEVK 180 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + F++ E A + R A D + L+A + P+ V + ++ +APA+ + Sbjct: 181 LLKFDQNTETFDALKDGRGVALAHDNALLWAWAK--ENPNFEVAIGNLGPAEFIAPAVQK 238 Query: 233 GDTEWYNIVSWTHYAMVTAEELG-ITQKNINQVSKDTTNPD 272 G+T+ N V+ AM L +K + V + P+ Sbjct: 239 GNTDLLNWVNGEIAAMKKDGRLKAAYEKTLLPVYGEKVKPE 279 >gi|300817825|ref|ZP_07098039.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 107-1] gi|331651668|ref|ZP_08352687.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli M718] gi|300529522|gb|EFK50584.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 107-1] gi|324016061|gb|EGB85280.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 117-3] gi|331049946|gb|EGI22004.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli M718] Length = 327 Score = 212 bits (540), Expect = 7e-53, Method: Composition-based stats. Identities = 47/252 (18%), Positives = 94/252 (37%), Gaps = 9/252 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQ 79 S L I K G + G V F+ G+ D+ A+ A+ +K ++ Sbjct: 55 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 114 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ + G + K I Sbjct: 115 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAAF--SDTIFVVGTRLLTKKGGDIKD 172 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L G ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 173 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 232 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L + +P I+ S+ + + D ++ ++ T + T+ E +K Sbjct: 233 LLAGERAKAKKPDNWDIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGE---AEK 289 Query: 260 NINQVSKDTTNP 271 ++ K+ P Sbjct: 290 WFDKWFKNPIPP 301 >gi|85058784|ref|YP_454486.1| glutamate and aspartate transporter subunit [Sodalis glossinidius str. 'morsitans'] gi|84779304|dbj|BAE74081.1| glutamate-aspartate ABC transporter periplasmic component GltI [Sodalis glossinidius str. 'morsitans'] Length = 298 Score = 212 bits (540), Expect = 7e-53, Method: Composition-based stats. Identities = 56/279 (20%), Positives = 103/279 (36%), Gaps = 17/279 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K L L+++ + +A L IK G + G + F+ Sbjct: 3 MRK----LALSLVMIGIAASQAHAEELTGTLKKIKDNGVIVVGHRESSIPFSYYDNQQKV 58 Query: 57 KGFDVDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G+ D+ A+ A+ +++YLP+ + R LQ+ D +T L R+ Sbjct: 59 VGYSQDYSNAIVDAVKKKIDAPNLQVKYLPITSSNRIPLLQNGTYDFECGSTTNNLERQK 118 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + + G + K I S L+G ++ V AGTT+E+ L MK Sbjct: 119 QVDF--SDTLFIIGTRLAVKKGALIKDFSDLAGKTVVVTAGTTSEVLLNKLNDEKQMKMR 176 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 I + + R A+ D + L + +P + I+ SK + + Sbjct: 177 IISTKDHGDSFRTLENGRAVAFMMDDALLAGEHAKSRKPDQWDIVGTPQSKEAYGCMLRK 236 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 D ++ ++ T + T+ E +K ++ K P Sbjct: 237 DDAQFKTLMDDTIAHIQTSGE---AEKLYDKWFKQPIPP 272 >gi|260597072|ref|YP_003209643.1| glutamate and aspartate transporter subunit [Cronobacter turicensis z3032] gi|260216249|emb|CBA29167.1| Glutamate/aspartate periplasmic-binding protein [Cronobacter turicensis z3032] Length = 314 Score = 212 bits (540), Expect = 7e-53, Method: Composition-based stats. Identities = 52/277 (18%), Positives = 100/277 (36%), Gaps = 13/277 (4%) Query: 3 KDFFVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 + ++L + + + + +AS L IK G + G V F+ G Sbjct: 17 RKLTAAMLVMGLSAGLAHAEDASGGQSTLDKIKANGVIVVGHRESSVPFSYYDNQQKVVG 76 Query: 59 FDVDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + D+ A+ A+ +K ++ +P+ ++ R LQ+ D +T L R+ Sbjct: 77 YSQDYSNAIVEAVKKQLNKPDLQVKMIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQA 136 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + G ++ K I L G ++ V +GTT+E+ L M I Sbjct: 137 AF--SDTIFVVGTRLLVKKGGPIKDFPDLKGKAVVVTSGTTSEVLLHKLNDEKKMDMRII 194 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + + R A+ D + L + + I+ SK + +GD Sbjct: 195 SAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKQDNWEIVGTPQSKEAYGCMLRKGD 254 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + +V T T+ E K ++ K+ P Sbjct: 255 ESFKKLVDDTIAQAQTSGE---AAKWFDKWFKNPIPP 288 >gi|193063399|ref|ZP_03044489.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli E22] gi|194429723|ref|ZP_03062239.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli B171] gi|260842881|ref|YP_003220659.1| periplasmic-binding component GltI [Escherichia coli O103:H2 str. 12009] gi|192930983|gb|EDV83587.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli E22] gi|194412204|gb|EDX28510.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli B171] gi|257758028|dbj|BAI29525.1| periplasmic-binding component GltI [Escherichia coli O103:H2 str. 12009] gi|323158891|gb|EFZ44902.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli E128010] Length = 302 Score = 212 bits (540), Expect = 7e-53, Method: Composition-based stats. Identities = 46/257 (17%), Positives = 94/257 (36%), Gaps = 9/257 (3%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK- 77 + S L I K G + G V F+ G+ D+ A+ A+ +K Sbjct: 25 AAPVAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKP 84 Query: 78 ---IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 ++ +P+ ++ R LQ+ D +T + R+ + G + K Sbjct: 85 DLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAAF--SDTIFVVGTRLLTKKG 142 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I + L ++ V +GTT+E+ L + M I + + + R A+ Sbjct: 143 GDIKDFADLKDKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAF 202 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D + L + +P I+ S+ + + D ++ ++ T + T+ E Sbjct: 203 MMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGE- 261 Query: 255 GITQKNINQVSKDTTNP 271 +K ++ K+ P Sbjct: 262 --AEKWFDKWFKNPIPP 276 >gi|281600010|gb|ADA72994.1| putative periplasmic binding transport protein [Shigella flexneri 2002017] Length = 327 Score = 212 bits (540), Expect = 7e-53, Method: Composition-based stats. Identities = 47/252 (18%), Positives = 94/252 (37%), Gaps = 9/252 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQ 79 S L I K G + G V F+ G+ D+ A+ A+ +K ++ Sbjct: 55 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 114 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ + G + K I Sbjct: 115 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAAF--SDTIFVVGTRLLTKKGGDIKD 172 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L G ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 173 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 232 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L + +P I+ S+ + + D ++ ++ T + T+ E +K Sbjct: 233 LLAGERAKAKKPDNWDIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGE---AEK 289 Query: 260 NINQVSKDTTNP 271 ++ K+ P Sbjct: 290 WFDKWFKNPIPP 301 >gi|154175491|ref|YP_001408468.1| acriflavine resistance protein [Campylobacter curvus 525.92] gi|112802700|gb|EAU00044.1| acriflavine resistance protein [Campylobacter curvus 525.92] Length = 288 Score = 212 bits (540), Expect = 7e-53, Method: Composition-based stats. Identities = 61/290 (21%), Positives = 117/290 (40%), Gaps = 29/290 (10%) Query: 1 MYK--DFFVSILCLIIL------------FFTSFSTNASILGDIKKRGFLKCGINTGLVG 46 M K FF++++ + L A + IK+RG+++ G+ + Sbjct: 1 MRKFSIFFLAVIATVFLTGCGEEKGADKSASAPSEQKADAIAKIKERGYVRIGVFSDKPP 60 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F V +G +G+D+ F + ++ + D SK+++ + A R L + ++DI N Sbjct: 61 FGYVDKDGKNQGYDIYFAKRIAKDMLGDESKVKFELVEAAGRVEVLTADKVDITLANFTK 120 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T R + A G + + I SV +L G + V GTT + YF Sbjct: 121 TPERAQVVDFAL--PYMKVSLGVVSPEGDVIKSVDELKGKKLIVNKGTTADA----YFTK 174 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + +++ E AA R A D + L+A + P V + + + Sbjct: 175 NYPDIELVKYDQNTETFAALVDKRGAALAHDNALLFAWAK--ENPGFVVGIEALGDVDVI 232 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN----QVSKDTTNPD 272 APA+ +G+T W + ++ + K+ + + D+ NP+ Sbjct: 233 APAVKKGNTALLE---WLNNEIIELGKENFFHKDYDATLKPIYGDSVNPE 279 >gi|172059651|ref|YP_001807303.1| extracellular solute-binding protein [Burkholderia ambifaria MC40-6] gi|171992168|gb|ACB63087.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MC40-6] Length = 297 Score = 212 bits (539), Expect = 8e-53, Method: Composition-based stats. Identities = 47/274 (17%), Positives = 98/274 (35%), Gaps = 9/274 (3%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 Y + + L + L IK G + G + F+ + G+ Sbjct: 3 YHKAVLMVAALCAFASGVHAQETGTLKKIKDTGVIALGHRESSIPFSYYDQSQQVVGYSR 62 Query: 62 DFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 +F + A+ + +++ +P+ ++ R +Q+ +DI +T R+ Sbjct: 63 EFQMKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNTERQQQAAF- 121 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + G + K G+ + L G ++ AGTT+E L + + I + Sbjct: 122 -SDTIFVIGTRLMTKKDSGVKDFADLKGKTVVTTAGTTSERLLRKMNNDKQLGMNIISAK 180 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + + R A+ D + L + +P E VI+ S+ + +GD ++ Sbjct: 181 DHGDSFNTLESGRAVAFMMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDADF 240 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 +V A+ E+ G K + + P Sbjct: 241 KKVVDD---AISQVEKSGEAAKIYAKWFESPIPP 271 >gi|331645812|ref|ZP_08346915.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli M605] gi|331044564|gb|EGI16691.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli M605] Length = 325 Score = 212 bits (539), Expect = 8e-53, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 93/252 (36%), Gaps = 9/252 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQ 79 + L I K G + G V F+ G+ D+ A+ A+ +K ++ Sbjct: 53 GNTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 112 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T R+ + G + K I Sbjct: 113 LIPITSQNRIPLLQNGTFDFECGSTTNNAERQKQAAF--SNTIFVVGTRLLTKKGGDIKD 170 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L G ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 171 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 230 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L + +P I+ S+ + + D ++ ++ T + T+ E +K Sbjct: 231 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGE---AEK 287 Query: 260 NINQVSKDTTNP 271 ++ K+ P Sbjct: 288 WFDKWFKNPIPP 299 >gi|206560032|ref|YP_002230796.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315] gi|198036073|emb|CAR51967.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315] Length = 271 Score = 212 bits (539), Expect = 8e-53, Method: Composition-based stats. Identities = 68/278 (24%), Positives = 103/278 (37%), Gaps = 14/278 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 M + + L + L + +A L DIKK G L+ F V A G Sbjct: 1 MKINTLATWLIGVALVTAGTAAHADRLDDIKKAGVLRVATFDSNPPFGYVDAKSNHIVGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD+ +AL+ + K+Q P N R L S ++D++ N T R + + Sbjct: 61 DVDYAKALADKLG---VKLQLQPTNPANRIPFLTSGKVDLVLANFTITDERAKQVDFS-- 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I YF + KK + S QL+G + GTT E+TL + F + ++ Sbjct: 116 -IPYFSSGQQFLAKKGVLKSADQLNGLRVGADKGTTNEITLREKFPKA----TIVAYDDT 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AA RA A T D L L + I IS + + +G+T Sbjct: 171 PFAFAALRAGNVQAITQDGPKLIGLLANVPDKQNYEIPAFTISNDYMGVGVPKGETRLLG 230 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277 V+ T E G + + TT + R Sbjct: 231 FVNDTLKG---LEANGRATQIYDAWFGPTTKTPLTRIF 265 >gi|73542047|ref|YP_296567.1| extracellular solute-binding protein [Ralstonia eutropha JMP134] gi|72119460|gb|AAZ61723.1| extracellular solute-binding protein, family 3 [Ralstonia eutropha JMP134] Length = 311 Score = 212 bits (539), Expect = 8e-53, Method: Composition-based stats. Identities = 60/277 (21%), Positives = 114/277 (41%), Gaps = 19/277 (6%) Query: 8 SILCLIILFFTS---------FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 ++L L L + + A +L I++ G ++ V F+ V A+G G Sbjct: 15 AVLVLSSLSCAAMLATGAASAGAATAPVLNHIQQTGVIRIAHRESSVPFSFV-ADGKPVG 73 Query: 59 FDVDFCRALSSAIFD----DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + VD C ++ A+ +++++P+ R A+ + D+ +T RE Sbjct: 74 YAVDLCLKIADAVRTSLHLPGLRVEWVPVTPANRIPAIVEGKADLECGSTTNN--RERRE 131 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 +AF Y G I+ GIS + L G ++ +GTT L + M++ + Sbjct: 132 QVAFTIPHYIAGSRMIVKTDSGISKWADLRGKTVVSTSGTTPLAMLRKMDEGKVMQWRLV 191 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + A A + DA+ D LY L+ RP + + ++++ P A + + D Sbjct: 192 EAKDHAQAFAMVEAGKADAFVMDDVLLYGLRANASRPGDFKVTGEMLTIEPYAIMLSKSD 251 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 E+ +V T A V +E T + + + P Sbjct: 252 PEFKKLVDKTLIAAVYDQE---TPRLYKKWFQAPIPP 285 >gi|295096601|emb|CBK85691.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 316 Score = 212 bits (539), Expect = 8e-53, Method: Composition-based stats. Identities = 51/277 (18%), Positives = 99/277 (35%), Gaps = 13/277 (4%) Query: 3 KDFFVSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 + ++L + + + S L I K G + G V F+ G Sbjct: 19 RKLATAMLVMGMSAGVVHAEDAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNTQKVVG 78 Query: 59 FDVDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + D+ A+ A+ +K ++ +P+ ++ R LQ+ D +T L R+ Sbjct: 79 YSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQA 138 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + G + K I + L G ++ V +GTT+E+ L M I Sbjct: 139 AF--SDTIFVVGTRLLTKKGGDIKDFADLKGKAVVVTSGTTSEVLLHKLNDEKKMDMRII 196 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + + R A+ D + L + +P I+ SK + +GD Sbjct: 197 SAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGTAQSKEAYGCMLRKGD 256 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 ++ ++ T T+ E K ++ K+ P Sbjct: 257 EDFKKLIDDTIAQAQTSGE---AAKWFDKWFKNPIPP 290 >gi|238762870|ref|ZP_04623838.1| Glutamate/aspartate periplasmic-binding protein [Yersinia kristensenii ATCC 33638] gi|238698881|gb|EEP91630.1| Glutamate/aspartate periplasmic-binding protein [Yersinia kristensenii ATCC 33638] Length = 304 Score = 212 bits (539), Expect = 8e-53, Method: Composition-based stats. Identities = 48/259 (18%), Positives = 96/259 (37%), Gaps = 9/259 (3%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 +A L IK G + G V F+ G+ D+ + AI + Sbjct: 25 AAKADASADTLKKIKDNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNLIVDAIKKKLN 84 Query: 77 ----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 +++ +P+ ++ R LQ+ D +T L R+ + G + Sbjct: 85 APDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQQQAAF--SNTIFVVGTRLLTK 142 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 K I L+G + V +GTT+E+ L + NM I + + + R Sbjct: 143 KGSEIKDFKDLAGKPVVVTSGTTSEVLLNKLNEKDNMNMRIISAKDHGDSFRTLESGRAV 202 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 A+ D + L + +P + I+ S+ + + D + ++ T +A+ Sbjct: 203 AFMMDDALLAGERAKAKKPDQWDIVGTPQSQEAYGCMLRKNDPAFKALLDETI---ASAQ 259 Query: 253 ELGITQKNINQVSKDTTNP 271 G+ +K+ ++ K+ P Sbjct: 260 TSGVAEKSFDRWFKNPIPP 278 >gi|315452691|ref|YP_004072961.1| amino-acid(glutamine) ABC transporter, periplasmic glutamine-binding protein [Helicobacter felis ATCC 49179] gi|315131743|emb|CBY82371.1| amino-acid(Glutamine) ABC transporter, periplasmic glutamine-binding protein [Helicobacter felis ATCC 49179] Length = 276 Score = 212 bits (539), Expect = 9e-53, Method: Composition-based stats. Identities = 62/271 (22%), Positives = 115/271 (42%), Gaps = 14/271 (5%) Query: 5 FFVSILCLIILFFT--SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 F+ +L L + + S L IK+RG LK G+ + F + + G+++GFDV Sbjct: 10 IFLVVLGLGLAGCGDHKNQSKESGLASIKQRGVLKVGVFSDKPPFGYMDSKGEYQGFDVY 69 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + ++ + D KI+++P+ A R L+S ++DI+ N T RE + A Sbjct: 70 IAKRMAKDLLGDEKKIEFIPVEAAARVEFLKSNKVDIIMANFTKTKEREAVVDFAK---P 126 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y + K + S+ L + V GTT + YF + + +++ E Sbjct: 127 YMKVALGVASKNGEVKSIEDLKDKPLIVNKGTTADF----YFSKNYPNISLLKYDQNTET 182 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A + +R A D + L+A P V +P + + +APA+ +G+ Sbjct: 183 FLALKDNRGPALAHDNTLLFAWVK--KNPEFKVGIPSLGDQDVIAPAVKKGNKALLE--- 237 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 W + + T + G +K + K ++ Sbjct: 238 WLNKEIDTLTKDGFIKKAYDATLKPVYGDEI 268 >gi|317047307|ref|YP_004114955.1| family 3 extracellular solute-binding protein [Pantoea sp. At-9b] gi|316948924|gb|ADU68399.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b] Length = 308 Score = 212 bits (539), Expect = 9e-53, Method: Composition-based stats. Identities = 52/254 (20%), Positives = 91/254 (35%), Gaps = 9/254 (3%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK---- 77 S L I K G + G V F+ G+ D+ A+ AI +K Sbjct: 34 QQVSTLEKISKNGVIVVGHRESSVPFSYYDNEQKVVGYSQDYSNAIVEAIKKKLNKPDLQ 93 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++ LP+ ++ R LQ+ D +T L R+ + G ++ K I Sbjct: 94 VKMLPITSQNRIPLLQNGTFDFECGSTTNNLERQQQAAF--SDTIFVVGTRLLVKKGGPI 151 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + L G ++ V +GTT+E+ L + M I + + R A+ D Sbjct: 152 KDFADLKGKTVVVTSGTTSEILLNKLNDSQKMGMRIISAKDHGDSFRTLETGRAVAFMMD 211 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 + L + +P IL S + + D E+ ++ T T+ E Sbjct: 212 DALLAGERAKAKKPDNWEILGTPQSHEAYGCMLRKNDPEFKKLMDDTIAQAQTSGE---A 268 Query: 258 QKNINQVSKDTTNP 271 K ++ K+ P Sbjct: 269 AKWFDKWFKNPIPP 282 >gi|313667604|ref|YP_004047888.1| ABC transporter [Neisseria lactamica ST-640] gi|313005066|emb|CBN86498.1| putative ABC transporter [Neisseria lactamica 020-06] Length = 284 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 64/280 (22%), Positives = 121/280 (43%), Gaps = 18/280 (6%) Query: 3 KDFFVSILCLIILFF---------TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 K S + L +S S+ A+ + IK++G ++ G+ F V AN Sbjct: 8 KALLASAAIAVGLTACGGGSGDAQSSQSSGAATVAAIKEKGVIRIGVFGDKPPFGYVDAN 67 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G +GFDV+ + L+ + P K++++ A R ++S ++D++ N T R + Sbjct: 68 GKNQGFDVEIAKDLAKDLLGSPDKVEFVLTEAANRVEYVRSGKVDLILANFTKTPERAEA 127 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + A G + K K I+ V+QL ++ V GTT + +F + + Sbjct: 128 VDFAD--PYMKVALGVVSPKDKPITDVAQLKDQTLLVNKGTTADA----FFTKSHPEVKL 181 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + F++ E A + R A D + L+A + P+ V + ++ +APA+ +G Sbjct: 182 LKFDQNTETFDALKDGRGVALAHDNALLWAWAK--ENPNFEVAIGNLGPAEFIAPAVQKG 239 Query: 234 DTEWYNIVSWTHYAMVTAEELG-ITQKNINQVSKDTTNPD 272 + + N V+ AM L +K + V + P+ Sbjct: 240 NADLLNWVNGEIAAMKKDGRLKAAYEKTLLPVYGEKVKPE 279 >gi|325518275|gb|EGC98022.1| extracellular solute-binding protein [Burkholderia sp. TJI49] Length = 271 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 66/278 (23%), Positives = 103/278 (37%), Gaps = 14/278 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 M + L + L + +A L DI+K G L+ F V A G Sbjct: 1 MKIHTLAAWLVGVALVTAGTAAHADRLDDIRKAGVLRVATFDSNPPFGYVDAKSNHIVGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD+ +A++ + K+Q P N R L S ++D++ N T R + + Sbjct: 61 DVDYAKAIADKLG---VKLQLQPTNPANRIPFLTSGKVDLVLANFTITDERAKQVDFS-- 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I YF + KK + S QL+G + GTT E+TL + + + + ++ Sbjct: 116 -IPYFSSGQQFLAKKGVLKSADQLNGLRVGADKGTTNEITLREKYPSA----TIVAYDDT 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AA RA A T D L L + I IS + + +G+T Sbjct: 171 PFAFAALRAGNVQAITQDGPKLIGLLANVPDKQNYEIPAFTISNDYMGVGVPKGETRLLG 230 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277 V+ T E G K + TT + R Sbjct: 231 FVNDTLKG---LEASGRAAKIYDAWFGPTTKTPLTRIF 265 >gi|168764668|ref|ZP_02789675.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC4501] gi|217324409|ref|ZP_03440493.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. TW14588] gi|189365371|gb|EDU83787.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC4501] gi|217320630|gb|EEC29054.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. TW14588] Length = 302 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 47/252 (18%), Positives = 94/252 (37%), Gaps = 9/252 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQ 79 S L I K G + G V F+ G+ D+ A+ A+ +K ++ Sbjct: 30 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ + G + K I Sbjct: 90 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAAF--SDTIFVVGTRLLTKKGDDIKD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L G ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 148 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 207 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L + +P I+ S+ + + D ++ ++ T + T+ E +K Sbjct: 208 LLAGERAKAKKPDNWDIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGE---AEK 264 Query: 260 NINQVSKDTTNP 271 ++ K+ P Sbjct: 265 WFDKWFKNPIPP 276 >gi|15800369|ref|NP_286381.1| glutamate and aspartate transporter subunit [Escherichia coli O157:H7 EDL933] gi|15829948|ref|NP_308721.1| glutamate and aspartate transporter subunit [Escherichia coli O157:H7 str. Sakai] gi|30062157|ref|NP_836328.1| glutamate and aspartate transporter subunit [Shigella flexneri 2a str. 2457T] gi|56479704|ref|NP_706556.2| glutamate and aspartate transporter subunit [Shigella flexneri 2a str. 301] gi|82775933|ref|YP_402280.1| glutamate and aspartate transporter subunit [Shigella dysenteriae Sd197] gi|110804696|ref|YP_688216.1| glutamate and aspartate transporter subunit [Shigella flexneri 5 str. 8401] gi|168752225|ref|ZP_02777247.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC4113] gi|168758298|ref|ZP_02783305.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC4401] gi|168767102|ref|ZP_02792109.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC4486] gi|168777604|ref|ZP_02802611.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC4196] gi|168779146|ref|ZP_02804153.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC4076] gi|168786505|ref|ZP_02811512.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC869] gi|168802435|ref|ZP_02827442.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC508] gi|195939393|ref|ZP_03084775.1| glutamate and aspartate transporter subunit [Escherichia coli O157:H7 str. EC4024] gi|208805792|ref|ZP_03248129.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC4206] gi|208816032|ref|ZP_03257211.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC4045] gi|208823216|ref|ZP_03263534.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC4042] gi|209399444|ref|YP_002269290.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC4115] gi|209917916|ref|YP_002292000.1| glutamate and aspartate transporter subunit [Escherichia coli SE11] gi|254791819|ref|YP_003076656.1| glutamate and aspartate transporter subunit [Escherichia coli O157:H7 str. TW14359] gi|261224124|ref|ZP_05938405.1| glutamate and aspartate transporter subunit, periplasmic-binding component of ABC superfamily protein [Escherichia coli O157:H7 str. FRIK2000] gi|261257818|ref|ZP_05950351.1| glutamate and aspartate transporter subunit, periplasmic-binding component of ABC superfamily protein [Escherichia coli O157:H7 str. FRIK966] gi|307312629|ref|ZP_07592261.1| extracellular solute-binding protein family 3 [Escherichia coli W] gi|309786318|ref|ZP_07680944.1| glutamate/aspartate periplasmic-binding protein [Shigella dysenteriae 1617] gi|12513562|gb|AAG54989.1|AE005244_7 putative periplasmic binding transport protein [Escherichia coli O157:H7 str. EDL933] gi|13360152|dbj|BAB34117.1| putative periplasmic binding transport protein [Escherichia coli O157:H7 str. Sakai] gi|30040402|gb|AAP16134.1| putative periplasmic binding transport protein [Shigella flexneri 2a str. 2457T] gi|56383255|gb|AAN42263.2| putative periplasmic binding transport protein [Shigella flexneri 2a str. 301] gi|81240081|gb|ABB60791.1| putative periplasmic binding transport protein [Shigella dysenteriae Sd197] gi|110614244|gb|ABF02911.1| putative periplasmic binding transport protein [Shigella flexneri 5 str. 8401] gi|187767185|gb|EDU31029.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC4196] gi|188013872|gb|EDU51994.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC4113] gi|189002825|gb|EDU71811.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC4076] gi|189354868|gb|EDU73287.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC4401] gi|189363489|gb|EDU81908.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC4486] gi|189373621|gb|EDU92037.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC869] gi|189375561|gb|EDU93977.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC508] gi|208725593|gb|EDZ75194.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC4206] gi|208732680|gb|EDZ81368.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC4045] gi|208737409|gb|EDZ85093.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC4042] gi|209160844|gb|ACI38277.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC4115] gi|209776908|gb|ACI86766.1| putative periplasmic binding transport protein [Escherichia coli] gi|209776910|gb|ACI86767.1| putative periplasmic binding transport protein [Escherichia coli] gi|209776912|gb|ACI86768.1| putative periplasmic binding transport protein [Escherichia coli] gi|209776914|gb|ACI86769.1| putative periplasmic binding transport protein [Escherichia coli] gi|209776916|gb|ACI86770.1| putative periplasmic binding transport protein [Escherichia coli] gi|209911175|dbj|BAG76249.1| glutamate/aspartate ABC transporter substrate binding component [Escherichia coli SE11] gi|254591219|gb|ACT70580.1| glutamate and aspartate transporter subunit, periplasmic-binding component of ABC superfamily [Escherichia coli O157:H7 str. TW14359] gi|306907331|gb|EFN37836.1| extracellular solute-binding protein family 3 [Escherichia coli W] gi|308925712|gb|EFP71193.1| glutamate/aspartate periplasmic-binding protein [Shigella dysenteriae 1617] gi|313649699|gb|EFS14123.1| glutamate/aspartate periplasmic-binding protein [Shigella flexneri 2a str. 2457T] gi|315059910|gb|ADT74237.1| glutamate and aspartate transporter subunit [Escherichia coli W] gi|320193061|gb|EFW67701.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Escherichia coli O157:H7 str. EC1212] gi|320638106|gb|EFX07870.1| glutamate and aspartate transporter subunit [Escherichia coli O157:H7 str. G5101] gi|320643510|gb|EFX12680.1| glutamate and aspartate transporter subunit [Escherichia coli O157:H- str. 493-89] gi|320648845|gb|EFX17472.1| glutamate and aspartate transporter subunit [Escherichia coli O157:H- str. H 2687] gi|320654429|gb|EFX22476.1| glutamate and aspartate transporter subunit [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320660111|gb|EFX27641.1| glutamate and aspartate transporter subunit [Escherichia coli O55:H7 str. USDA 5905] gi|320664909|gb|EFX32044.1| glutamate and aspartate transporter subunit [Escherichia coli O157:H7 str. LSU-61] gi|323184990|gb|EFZ70357.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli 1357] gi|323379526|gb|ADX51794.1| extracellular solute-binding protein family 3 [Escherichia coli KO11] gi|326341405|gb|EGD65197.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Escherichia coli O157:H7 str. 1044] gi|326345815|gb|EGD69554.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Escherichia coli O157:H7 str. 1125] Length = 302 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 47/252 (18%), Positives = 94/252 (37%), Gaps = 9/252 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQ 79 S L I K G + G V F+ G+ D+ A+ A+ +K ++ Sbjct: 30 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ + G + K I Sbjct: 90 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAAF--SDTIFVVGTRLLTKKGGDIKD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L G ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 148 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 207 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L + +P I+ S+ + + D ++ ++ T + T+ E +K Sbjct: 208 LLAGERAKAKKPDNWDIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGE---AEK 264 Query: 260 NINQVSKDTTNP 271 ++ K+ P Sbjct: 265 WFDKWFKNPIPP 276 >gi|170020988|ref|YP_001725942.1| glutamate and aspartate transporter subunit [Escherichia coli ATCC 8739] gi|188495638|ref|ZP_03002908.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli 53638] gi|169755916|gb|ACA78615.1| extracellular solute-binding protein family 3 [Escherichia coli ATCC 8739] gi|188490837|gb|EDU65940.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli 53638] Length = 302 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 47/252 (18%), Positives = 94/252 (37%), Gaps = 9/252 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQ 79 S L I K G + G V F+ G+ D+ A+ A+ +K ++ Sbjct: 30 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ + G + K I Sbjct: 90 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAAF--SDTIFVVGTRLLTKKGGDIKD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L G ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 148 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 207 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L + +P I+ S+ + + D ++ ++ T + T+ E +K Sbjct: 208 LLAGERAKAKKPDNWDIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGE---AEK 264 Query: 260 NINQVSKDTTNP 271 ++ K+ P Sbjct: 265 WFDKWFKNPIPP 276 >gi|228989782|ref|ZP_04149762.1| hypothetical protein bpmyx0001_5510 [Bacillus pseudomycoides DSM 12442] gi|228769929|gb|EEM18512.1| hypothetical protein bpmyx0001_5510 [Bacillus pseudomycoides DSM 12442] Length = 276 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 61/278 (21%), Positives = 112/278 (40%), Gaps = 24/278 (8%) Query: 1 MYKDFFVSIL-CLIILFFTSF-----------STNASILGDIKKRGFLKCGINTGLVGFA 48 M K F + + CL L ++ ++ IKKRG L G+ F Sbjct: 4 MKKLFVLIVFSCLFTLIVAGCGKETSKEVSKETSGGKVVDQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 A G +GFDVD +AL+ I D SK+++ + +K R L++ ID + T Sbjct: 64 LKDPATGKVEGFDVDIAKALAKKILGDESKVEFKEVTSKTRIPMLKNGDIDTIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKA 166 R+ + + + GQ ++ K I S+ + G ++ G+T+ + + Sbjct: 124 EERKKEVDF--SDVYFKAGQSLLVKKGSKIKSIDDVKSGVTVLAVKGSTSTQNIREKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 182 A----KVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDAN---YQVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQ 263 A+ +G T+ +++ M E + +K I + Sbjct: 235 GIAVQKGATDLTKVINDLLKEMKANGEYDKLYEKWIGE 272 >gi|237730633|ref|ZP_04561114.1| glutamate and aspartate transporter subunit [Citrobacter sp. 30_2] gi|226906172|gb|EEH92090.1| glutamate and aspartate transporter subunit [Citrobacter sp. 30_2] Length = 317 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 47/252 (18%), Positives = 93/252 (36%), Gaps = 9/252 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQ 79 S L I K G + G V F+ G+ D+ A+ A+ +K ++ Sbjct: 45 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVDAVKKKLNKPDLQVK 104 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ + G + K + Sbjct: 105 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAAF--SDTIFVVGTRLLAKKGGDVKD 162 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L G ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 163 FADLKGKAVVVTSGTTSEVLLHKLNEEQKMDMRIISAKDHGDSFRTLESGRAVAFMMDDA 222 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L + +P I+ S+ + + D E+ ++ T T+ E +K Sbjct: 223 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPEFKKLMDDTIAKAQTSGE---AEK 279 Query: 260 NINQVSKDTTNP 271 ++ K+ P Sbjct: 280 WFDKWFKNPIPP 291 >gi|313891392|ref|ZP_07825008.1| ABC transporter, substrate-binding protein, family 3 [Dialister microaerophilus UPII 345-E] gi|313120167|gb|EFR43343.1| ABC transporter, substrate-binding protein, family 3 [Dialister microaerophilus UPII 345-E] Length = 281 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 66/286 (23%), Positives = 122/286 (42%), Gaps = 28/286 (9%) Query: 1 MYK--DFFVSILCLIILFFTSFSTNAS--------ILGDIKKRGFLKCGINTGLVGFAEV 50 M K F ++I+ ++ L F S + S + +IKK G L G+ + F + Sbjct: 1 MKKITMFLMAIVSILALTFASGCASNSETESKPYRSIAEIKKSGELIIGVFSDKAPFGYI 60 Query: 51 KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 NG+++G+D+ F L+ + P +Y+ L R ++ ++DI+ N T R Sbjct: 61 DKNGNYRGYDIYFAERLAKDLGVKP---KYISLEPANRTEYAKTGKVDIILANFTMTKER 117 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 + A G + K + I+SV QL G + V GTT E YF ++ + Sbjct: 118 AEQVDFAL--PYMKVAIGVVSPKNQNITSVEQLKGKKLIVAKGTTAET----YFTENHPE 171 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 + F++ E A R DA++ D + + A + P V + + +APA+ Sbjct: 172 IELLKFDQYSETYNALLDKRGDAFSTDNTEVLAWAM--KNPEYKVGITHLGKDEVIAPAV 229 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ----VSKDTTNPD 272 +G+ E + ++ + + + K+ + V + NPD Sbjct: 230 QKGNKELLDYIN---NEIKESAKENFFHKDYEETLAPVYGSSVNPD 272 >gi|300901167|ref|ZP_07119271.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 198-1] gi|301025212|ref|ZP_07188783.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 69-1] gi|300355381|gb|EFJ71251.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 198-1] gi|300396164|gb|EFJ79702.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 69-1] Length = 327 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 93/252 (36%), Gaps = 9/252 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQ 79 S L I K G + G V F+ G+ D+ A+ A+ +K ++ Sbjct: 55 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 114 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ + G + K I Sbjct: 115 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAAF--SDTIFVVGTRLLTKKGGDIKD 172 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 173 FADLKDKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 232 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L + +P I+ S+ + + D ++ ++ T + T+ E +K Sbjct: 233 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGE---AEK 289 Query: 260 NINQVSKDTTNP 271 ++ K+ P Sbjct: 290 WFDKWFKNPIPP 301 >gi|310766983|gb|ADP11933.1| glutamate/aspartate ABC transporter, substrate-binding protein [Erwinia sp. Ejp617] Length = 309 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 59/287 (20%), Positives = 103/287 (35%), Gaps = 24/287 (8%) Query: 4 DFFVSILCLIILFFTSFSTNAS---------------ILGDIKKRGFLKCGINTGLVGFA 48 F LCL + S +A L I K G + G V F+ Sbjct: 2 KFRKLGLCLALAGIASGIAHAEDAKAPAAADAQQQTHTLEKIAKSGVIVVGHRESSVPFS 61 Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNT 104 G+ D+ A+ +AI +K ++ LP+ ++ R LQ+ D +T Sbjct: 62 YYDNQQKAVGYSQDYSDAIVAAIKKKLNKPDLQVKMLPVTSQNRIPLLQNGTYDFECGST 121 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164 + R+ + + G ++ K I + L G ++ V +GTT+E+ L Sbjct: 122 TNNIERQKQASFSNSI--FVVGTRLLVKKGGAIKDFADLKGKTVVVTSGTTSEILLNKLN 179 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 M + + + + R A+ D + L + +PSE IL S Sbjct: 180 DEQKMGMRIVSAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPSEWEILGTPQSHE 239 Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + +GD E+ ++ T V A+ G K ++ K P Sbjct: 240 AYGCMLRKGDNEFKKLMDDTI---VQAQTSGEAAKWFDKWFKQPVPP 283 >gi|188025731|ref|ZP_02959612.2| hypothetical protein PROSTU_01484 [Providencia stuartii ATCC 25827] gi|188020278|gb|EDU58318.1| hypothetical protein PROSTU_01484 [Providencia stuartii ATCC 25827] Length = 295 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 50/275 (18%), Positives = 99/275 (36%), Gaps = 10/275 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +S++ L L I G + G V F+ N G+ Sbjct: 1 MSK-IVLSMMVLGATCAVQAEELTGTLKKINDNGVIVVGHRESSVPFSYYDNNQKVVGYS 59 Query: 61 VDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 D+ + A+ +K ++ +P+ ++ R LQ+ D +T L R+ Sbjct: 60 QDYSNEIVDAVKKKLNKPNLEVKLIPITSQNRIPLLQNGTYDFECGSTTNNLERQKQAAF 119 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + G + G+ + L+G ++ V +GTT+E+ L NMK I Sbjct: 120 --SNTIFVVGTRLLTKNDSGVKDFADLAGKNVVVTSGTTSEILLNKLNDEKNMKMRIISA 177 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + + R A+ D + L + +P I+ ++ + + D + Sbjct: 178 KDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDIWEIVGKPQTEEAYGCMLRKDDPQ 237 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + +V T A+ G +K+ ++ P Sbjct: 238 FKALVDETI---AKAQTSGTAEKSFDRWFNQPIPP 269 >gi|281177803|dbj|BAI54133.1| glutamate/aspartate ABC transporter substrate binding component [Escherichia coli SE15] gi|330910411|gb|EGH38921.1| glutamate Aspartate periplasmic binding protein precursor GltI [Escherichia coli AA86] Length = 302 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 93/252 (36%), Gaps = 9/252 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQ 79 + L I K G + G V F+ G+ D+ A+ A+ +K ++ Sbjct: 30 GNTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T R+ + G + K I Sbjct: 90 LIPITSQNRIPLLQNGTFDFECGSTTNNAERQKQAAF--SNTIFVVGTRLLTKKGGDIKD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L G ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 148 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 207 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L + +P I+ S+ + + D ++ ++ T + T+ E +K Sbjct: 208 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGE---AEK 264 Query: 260 NINQVSKDTTNP 271 ++ K+ P Sbjct: 265 WFDKWFKNPIPP 276 >gi|319761413|ref|YP_004125350.1| extracellular solute-binding protein family 3 [Alicycliphilus denitrificans BC] gi|317115974|gb|ADU98462.1| extracellular solute-binding protein family 3 [Alicycliphilus denitrificans BC] Length = 299 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 52/276 (18%), Positives = 109/276 (39%), Gaps = 10/276 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + ++ ++ + L IK G + G+ A +G + GF Sbjct: 1 MKKHLLAAAITVLAAG-SAIAQANDTLAKIKSSGAITLGVRESSGALAYTLGDGKYVGFH 59 Query: 61 VDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 + ++ + +I+Y P+ ++ R + + +D+ +T L R+ + Sbjct: 60 TEMAERVARDLQKKLGLSKLEIKYQPVTSQNRIPLVVNGTVDLECGSTTNNLARQKDVAF 119 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 A TY + + GIS + L+G +I GTT+ TL +A M + ++ Sbjct: 120 AN--TTYVEEVRIAVKANSGISDIKDLNGKTIVTTTGTTSVQTLRKNKRAEGMNFREVMG 177 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + R DA+ D S L + P++ I+ + +S P+A + + D Sbjct: 178 KDHADSFLMLETGRADAFIMDGSILAGNISKSKNPNDFKIVGEALSVEPIACMLRKDDPA 237 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272 + V + A + + G K+ ++ P+ Sbjct: 238 FKKAVDESIVAQI---KDGTLAKSYDKWFMQPIPPN 270 >gi|313144530|ref|ZP_07806723.1| amino-acid ABC transporter periplasmic solute-binding protein [Helicobacter cinaedi CCUG 18818] gi|313129561|gb|EFR47178.1| amino-acid ABC transporter periplasmic solute-binding protein [Helicobacter cinaedi CCUG 18818] Length = 286 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 59/272 (21%), Positives = 113/272 (41%), Gaps = 18/272 (6%) Query: 1 MYKDFFVSILCLIILFFTSFS---TNASI---LGDIKKRGFLKCGINTGLVGFAEVKANG 54 M K + + +++ ++ A + IK+ G L+ G+ F + NG Sbjct: 12 MKKWIVAFLATICVIWLSACGDDKAQAQTSRGVEQIKQNGVLRVGVFGDKPPFGFIDENG 71 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 GFD+ + L+ + D SKI+++ A R L+S ++DI+ N T RE ++ Sbjct: 72 KNAGFDIYIAKRLAKDLLGDESKIEFILTEAASRVEFLRSNKVDIIMANFTQTKEREEAV 131 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 A Y ++ I SV L G + V GTT ++ YF ++ + Sbjct: 132 DFAK---PYMKVSLGVVSPNGEIKSVEDLKGKKLIVNKGTTADV----YFSKNHPDIELL 184 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +E+ + A + R DA D + + A + + P V +P + + +APA+ +G+ Sbjct: 185 KYEQNTQAFLALKDKRGDALAHDNTLVLAWAM--ENPGFGVGIPTLGEEDVIAPAVKKGN 242 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 E +W + G ++ ++ Sbjct: 243 VELK---TWLDEEITKLTSEGFIKEAYDKTLA 271 >gi|300937877|ref|ZP_07152670.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 21-1] gi|300457120|gb|EFK20613.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 21-1] gi|325498166|gb|EGC96025.1| glutamate and aspartate transporter subunit [Escherichia fergusonii ECD227] Length = 325 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 93/252 (36%), Gaps = 9/252 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQ 79 S L I K G + G V F+ G+ D+ A+ A+ +K ++ Sbjct: 53 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 112 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ + G + K I Sbjct: 113 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAAF--SDTIFVVGTRLLTKKGGDIKD 170 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 171 FADLKDKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 230 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L + +P I+ S+ + + D ++ ++ T + T+ E +K Sbjct: 231 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGE---AEK 287 Query: 260 NINQVSKDTTNP 271 ++ K+ P Sbjct: 288 WFDKWFKNPIPP 299 >gi|329121399|ref|ZP_08250024.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Dialister micraerophilus DSM 19965] gi|327469689|gb|EGF15156.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Dialister micraerophilus DSM 19965] Length = 281 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 66/286 (23%), Positives = 123/286 (43%), Gaps = 28/286 (9%) Query: 1 MYK--DFFVSILCLIILFFTSFSTNAS--------ILGDIKKRGFLKCGINTGLVGFAEV 50 M K F ++I+ ++ L F S + S + +IKK G L G+ + F + Sbjct: 1 MKKFTTFLMAIVSILALTFASGCASNSETESKPYRSIAEIKKSGELIIGVFSDKAPFGYI 60 Query: 51 KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 NG+++G+D+ F L+ + P +Y+ L R ++ ++DI+ N T R Sbjct: 61 DKNGNYRGYDIYFAERLAKDLGVKP---KYISLEPANRTEYAKTGKVDIILANFTVTKER 117 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 + A G + K + I+SV QL G + V GTT E YF ++ + Sbjct: 118 AEQVDFAL--PYMKVAIGVVSPKNQNITSVEQLKGKKLIVAKGTTAET----YFTENHPE 171 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 + F++ E +A R DA++ D + + A + P V + + +APA+ Sbjct: 172 IELLKFDQYAETYSALLDKRGDAFSTDNTEVLAWAM--KNPEYKVGITHLGKDEVIAPAV 229 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ----VSKDTTNPD 272 +G+ E + ++ + + + K+ + V + NPD Sbjct: 230 QKGNKELLDYIN---NEIKESAKENFFHKDYEETLAPVYGSSVNPD 272 >gi|300715838|ref|YP_003740641.1| Glutamate/aspartate periplasmic-binding protein [Erwinia billingiae Eb661] gi|299061674|emb|CAX58790.1| Glutamate/aspartate periplasmic-binding protein [Erwinia billingiae Eb661] Length = 300 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 50/255 (19%), Positives = 93/255 (36%), Gaps = 9/255 (3%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK--- 77 ++ + L I K G + G V F+ G+ D+ A+ +AI +K Sbjct: 25 ASQSPTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVAAIKAKLNKPDL 84 Query: 78 -IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 ++ LP+ ++ R LQ+ D +T L R+ + G ++ K Sbjct: 85 QVKMLPVTSQNRIPLLQNGTYDFECGSTTNNLERQKQAAF--SDTIFVIGTRLLVKKGSP 142 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 I L G ++ V +GTT+E+ L M I + + + R A+ Sbjct: 143 IKDFPDLKGKTVVVTSGTTSEILLNKLNDEKKMDMRIISAKDHGDSFRTLESGRAVAFMM 202 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 D + L + +P VI+ SK + + D + ++ T T+ E Sbjct: 203 DDALLAGERAKAKKPDNWVIVGTPQSKEAYGCMLRKDDAGFKQLMDDTIAKAQTSGE--- 259 Query: 257 TQKNINQVSKDTTNP 271 K ++ + P Sbjct: 260 ASKWFDKWFSNPIPP 274 >gi|22125092|ref|NP_668515.1| glutamate and aspartate transporter subunit [Yersinia pestis KIM 10] gi|45440928|ref|NP_992467.1| glutamate and aspartate transporter subunit [Yersinia pestis biovar Microtus str. 91001] gi|51595455|ref|YP_069646.1| glutamate and aspartate transporter subunit [Yersinia pseudotuberculosis IP 32953] gi|108808475|ref|YP_652391.1| glutamate and aspartate transporter subunit [Yersinia pestis Antiqua] gi|108811264|ref|YP_647031.1| glutamate and aspartate transporter subunit [Yersinia pestis Nepal516] gi|145599901|ref|YP_001163977.1| glutamate and aspartate transporter subunit [Yersinia pestis Pestoides F] gi|149365484|ref|ZP_01887519.1| putative amino acid-binding protein precursor [Yersinia pestis CA88-4125] gi|153950913|ref|YP_001401882.1| glutamate and aspartate transporter subunit [Yersinia pseudotuberculosis IP 31758] gi|162419470|ref|YP_001606323.1| glutamate and aspartate transporter subunit [Yersinia pestis Angola] gi|165925198|ref|ZP_02221030.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165937719|ref|ZP_02226281.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Yersinia pestis biovar Orientalis str. IP275] gi|166008368|ref|ZP_02229266.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166212590|ref|ZP_02238625.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167399290|ref|ZP_02304814.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167422521|ref|ZP_02314274.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423472|ref|ZP_02315225.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167467950|ref|ZP_02332654.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Yersinia pestis FV-1] gi|170025231|ref|YP_001721736.1| glutamate and aspartate transporter subunit [Yersinia pseudotuberculosis YPIII] gi|186894486|ref|YP_001871598.1| glutamate and aspartate transporter subunit [Yersinia pseudotuberculosis PB1/+] gi|218929696|ref|YP_002347571.1| glutamate and aspartate transporter subunit [Yersinia pestis CO92] gi|229838162|ref|ZP_04458321.1| glutamate and aspartate transporter subunit, periplasmic-binding component of ABC superfamily [Yersinia pestis biovar Orientalis str. PEXU2] gi|229895954|ref|ZP_04511124.1| glutamate and aspartate transporter subunit, periplasmic-binding component of ABC superfamily [Yersinia pestis Pestoides A] gi|229898727|ref|ZP_04513872.1| glutamate and aspartate transporter subunit, periplasmic-binding component of ABC superfamily [Yersinia pestis biovar Orientalis str. India 195] gi|229901502|ref|ZP_04516624.1| glutamate and aspartate transporter subunit, periplasmic-binding component of ABC superfamily [Yersinia pestis Nepal516] gi|294504419|ref|YP_003568481.1| putative amino acid-binding protein precursor [Yersinia pestis Z176003] gi|21957947|gb|AAM84766.1|AE013722_5 solute-binding periplasmic protein of glutamate/aspartate ABC transporter [Yersinia pestis KIM 10] gi|45435787|gb|AAS61344.1| putative amino acid-binding protein precursor [Yersinia pestis biovar Microtus str. 91001] gi|51588737|emb|CAH20348.1| ABC transporter, periplasmic glutamate/aspatate binding protein [Yersinia pseudotuberculosis IP 32953] gi|108774912|gb|ABG17431.1| amino acid-binding protein precursor [Yersinia pestis Nepal516] gi|108780388|gb|ABG14446.1| putative amino acid-binding protein precursor [Yersinia pestis Antiqua] gi|115348307|emb|CAL21238.1| putative amino acid-binding protein precursor [Yersinia pestis CO92] gi|145211597|gb|ABP41004.1| amino acid-binding protein precursor [Yersinia pestis Pestoides F] gi|149291897|gb|EDM41971.1| putative amino acid-binding protein precursor [Yersinia pestis CA88-4125] gi|152962408|gb|ABS49869.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Yersinia pseudotuberculosis IP 31758] gi|162352285|gb|ABX86233.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Yersinia pestis Angola] gi|165914469|gb|EDR33084.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Yersinia pestis biovar Orientalis str. IP275] gi|165922805|gb|EDR39956.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165992750|gb|EDR45051.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166206521|gb|EDR51001.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166958535|gb|EDR55556.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051794|gb|EDR63202.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057642|gb|EDR67388.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169751765|gb|ACA69283.1| extracellular solute-binding protein family 3 [Yersinia pseudotuberculosis YPIII] gi|186697512|gb|ACC88141.1| extracellular solute-binding protein family 3 [Yersinia pseudotuberculosis PB1/+] gi|229681431|gb|EEO77525.1| glutamate and aspartate transporter subunit, periplasmic-binding component of ABC superfamily [Yersinia pestis Nepal516] gi|229688275|gb|EEO80346.1| glutamate and aspartate transporter subunit, periplasmic-binding component of ABC superfamily [Yersinia pestis biovar Orientalis str. India 195] gi|229694528|gb|EEO84575.1| glutamate and aspartate transporter subunit, periplasmic-binding component of ABC superfamily [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700877|gb|EEO88906.1| glutamate and aspartate transporter subunit, periplasmic-binding component of ABC superfamily [Yersinia pestis Pestoides A] gi|262362591|gb|ACY59312.1| putative amino acid-binding protein precursor [Yersinia pestis D106004] gi|262366405|gb|ACY62962.1| putative amino acid-binding protein precursor [Yersinia pestis D182038] gi|294354878|gb|ADE65219.1| putative amino acid-binding protein precursor [Yersinia pestis Z176003] gi|320016181|gb|ADV99752.1| glutamate and aspartate transporter subunit, periplasmic-binding component of ABC superfamily [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 305 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 54/286 (18%), Positives = 105/286 (36%), Gaps = 24/286 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-----------SILGDIKKRGFLKCGINTGLVGFAE 49 M K L L++ TS A L +K G + G V F+ Sbjct: 3 MRK----LALVLLLAGMTSSVAQAEDATAKADTAIDTLQKVKNNGVIVVGHRESSVPFSY 58 Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTD 105 G+ D+ + AI + + +++ +P+ ++ R LQ+ D +T Sbjct: 59 YDNQQKVVGYSQDYSNLIVDAIRKELNAPNLEVKLIPITSQNRIPLLQNGTFDFECGSTT 118 Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165 L R+ + G + K + L+G ++ V +GTT+E+ L + Sbjct: 119 NNLERQQQAAF--SNTIFVVGTRLLTKKDSEVKDFKDLAGKAVVVTSGTTSEVLLNKLNE 176 Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225 NM I + + + R A+ D + L + +P E I+ S+ Sbjct: 177 KDNMNMRIISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDEWSIVGTPQSEEA 236 Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + + D + ++ T TA+ G+ +K+ ++ K+ P Sbjct: 237 YGCMMRKNDPAFKALLDKTI---ATAQTTGVAEKSFDRWFKNPIPP 279 >gi|283784426|ref|YP_003364291.1| glutamate/aspartate ABC transporter, substrate-binding protein [Citrobacter rodentium ICC168] gi|282947880|emb|CBG87442.1| glutamate/aspartate ABC transporter, substrate-binding protein [Citrobacter rodentium ICC168] Length = 302 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 49/278 (17%), Positives = 98/278 (35%), Gaps = 14/278 (5%) Query: 3 KDFFVSILCLIILF-----FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 + ++L + + + S L I K G + G V F+ Sbjct: 4 RKLATAMLVMGMSAGLAHAEDAAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVV 63 Query: 58 GFDVDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ D+ A+ A+ +K ++ +P+ ++ R LQ+ D +T + R+ Sbjct: 64 GYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQ 123 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + G + K I + L G ++ V +GTT+E+ L M Sbjct: 124 AAF--SNTIFVVGTRLLAKKGGDIKDFADLKGKAVVVTSGTTSEILLHKLNDEQKMDMRI 181 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + + + R A+ D + L + +P I+ S+ + + Sbjct: 182 ISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGKPQSEEAYGCMLRKN 241 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 D E+ ++ T T+ E K ++ K+ P Sbjct: 242 DPEFKKLMDETIAQAQTSGE---AAKWFDKWFKNPIPP 276 >gi|172060589|ref|YP_001808241.1| extracellular solute-binding protein [Burkholderia ambifaria MC40-6] gi|171993106|gb|ACB64025.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MC40-6] Length = 292 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 69/278 (24%), Positives = 101/278 (36%), Gaps = 14/278 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59 M + L L +A L DIKK G L+ F V A N G Sbjct: 22 MKIHTLATWLVGAALVTAGTVAHADRLDDIKKAGVLRVATFDSNPPFGYVDAKNNHIVGL 81 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD+ +AL+ + K+Q P N R L S ++D++ N T R + + Sbjct: 82 DVDYAKALADKLG---VKLQLQPTNPANRIPFLTSGKVDLVLANFTITDERAKQVDFS-- 136 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I YF + KK + S QL+G + GTT E+TL + F + ++ Sbjct: 137 -IPYFSSGQQFLAKKGVLKSADQLNGLRVGADKGTTNEITLREKFPKA----TIVAYDDT 191 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AA RA A T D L L + I IS + + +G+T Sbjct: 192 PFAFAALRAGNVQAITQDGPKLIGLLANVPDKQNYEIPAFTISNDYMGVGVPKGETRLLG 251 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277 V+ T E G + + TT + R Sbjct: 252 FVNDTLKG---LEANGRAVQIYDAWFGPTTKTPLTRIF 286 >gi|293418767|ref|ZP_06661202.1| LOW QUALITY PROTEIN: glutamate and aspartate transporter subunit [Escherichia coli B088] gi|291325295|gb|EFE64710.1| LOW QUALITY PROTEIN: glutamate and aspartate transporter subunit [Escherichia coli B088] Length = 301 Score = 210 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 93/252 (36%), Gaps = 9/252 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQ 79 S L I K G + G V F+ G+ D+ A+ A+ +K ++ Sbjct: 30 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ + G + K I Sbjct: 90 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAAF--SDTIFVVGTRLLTKKGGDIKD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 148 FADLKDKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 207 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L + +P I+ S+ + + D ++ ++ T + T+ E +K Sbjct: 208 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGE---AEK 264 Query: 260 NINQVSKDTTNP 271 ++ K+ P Sbjct: 265 WFDKWFKNPIPP 276 >gi|170680102|ref|YP_001742772.1| glutamate and aspartate transporter subunit [Escherichia coli SMS-3-5] gi|218549769|ref|YP_002383560.1| glutamate and aspartate transporter subunit [Escherichia fergusonii ATCC 35469] gi|218553197|ref|YP_002386110.1| glutamate and aspartate transporter subunit [Escherichia coli IAI1] gi|218703989|ref|YP_002411508.1| glutamate and aspartate transporter subunit [Escherichia coli UMN026] gi|293403917|ref|ZP_06647911.1| glutamate and aspartate transporter subunit [Escherichia coli FVEC1412] gi|298379692|ref|ZP_06989297.1| glutamate and aspartate transporter subunit [Escherichia coli FVEC1302] gi|331662021|ref|ZP_08362944.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli TA143] gi|170517820|gb|ACB15998.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli SMS-3-5] gi|218357310|emb|CAQ89945.1| glutamate and aspartate transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia fergusonii ATCC 35469] gi|218359965|emb|CAQ97509.1| glutamate and aspartate transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli IAI1] gi|218431086|emb|CAR11962.1| glutamate and aspartate transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli UMN026] gi|291428503|gb|EFF01528.1| glutamate and aspartate transporter subunit [Escherichia coli FVEC1412] gi|298279390|gb|EFI20898.1| glutamate and aspartate transporter subunit [Escherichia coli FVEC1302] gi|323170779|gb|EFZ56429.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli LT-68] gi|323945130|gb|EGB41192.1| bacterial extracellular solute-binding protein 3 [Escherichia coli H120] gi|323967602|gb|EGB63018.1| extracellular solute-binding protein 3 [Escherichia coli M863] gi|324114776|gb|EGC08744.1| extracellular solute-binding protein 3 [Escherichia fergusonii B253] gi|327254340|gb|EGE65962.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli STEC_7v] gi|331060443|gb|EGI32407.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli TA143] Length = 302 Score = 210 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 93/252 (36%), Gaps = 9/252 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQ 79 S L I K G + G V F+ G+ D+ A+ A+ +K ++ Sbjct: 30 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ + G + K I Sbjct: 90 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAAF--SDTIFVVGTRLLTKKGGDIKD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 148 FADLKDKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 207 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L + +P I+ S+ + + D ++ ++ T + T+ E +K Sbjct: 208 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGE---AEK 264 Query: 260 NINQVSKDTTNP 271 ++ K+ P Sbjct: 265 WFDKWFKNPIPP 276 >gi|124265636|ref|YP_001019640.1| amino-acid ABC transporter binding protein [Methylibium petroleiphilum PM1] gi|124258411|gb|ABM93405.1| amino-acid ABC transporter binding protein [Methylibium petroleiphilum PM1] Length = 297 Score = 210 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 57/297 (19%), Positives = 115/297 (38%), Gaps = 12/297 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + L T + L +K G + G+ + + G+ Sbjct: 1 MKKSLLI---LVTALAATGLAQAEDTLKKVKDSGAITLGVRESSGVLSYTLGGAKYVGYH 57 Query: 61 VDFCRALSSAIF---DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 V C I K+ Y P+ ++ R +Q+ +D+ +T R+ + A Sbjct: 58 VAICEKAVEDIEKAVGRKLKVNYQPVTSQNRIPLVQNGTVDLECGSTTNNATRQKDVAFA 117 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 T+ + + GI S++ L G ++ GTT+ TL +A NM++ + + Sbjct: 118 N--TTFVEEVRMAVKTSSGIKSIADLQGKTVATTTGTTSVQTLRKNKRAENMEFKEVFGK 175 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + + R D + D S L L + P++ I+ +++S P+A + + D Sbjct: 176 DHSDSFLLVDSGRADVFVMDGSLLAGLIARSKNPADFKIVGEVLSVEPIAIMMRKDDEAL 235 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKD 294 +V+ T MV + E+ ++ T P + +G+ S + + L + Sbjct: 236 LKLVNATIAGMVKSGEIN---ALYDKWFMQPTPPTGAK-VGLPMSDTLKDTLKHPNN 288 >gi|228995972|ref|ZP_04155628.1| hypothetical protein bmyco0003_5680 [Bacillus mycoides Rock3-17] gi|229003589|ref|ZP_04161405.1| hypothetical protein bmyco0002_5620 [Bacillus mycoides Rock1-4] gi|228757631|gb|EEM06860.1| hypothetical protein bmyco0002_5620 [Bacillus mycoides Rock1-4] gi|228763745|gb|EEM12636.1| hypothetical protein bmyco0003_5680 [Bacillus mycoides Rock3-17] Length = 276 Score = 210 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 61/278 (21%), Positives = 114/278 (41%), Gaps = 24/278 (8%) Query: 1 MYKDFFVSIL-CLIILFFTSF-----------STNASILGDIKKRGFLKCGINTGLVGFA 48 M K F + + CL L ++ ++ IKKRG L G+ F Sbjct: 4 MKKLFVLIVFSCLFTLIVAGCGKETSKEVSKETSGGKVVDQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 A G +GFDVD +AL+ I D SK+++ + +K R L++ ID + T Sbjct: 64 LKDPATGKVEGFDVDIAKALAKKILGDESKVEFKEVTSKTRIPMLKNGDIDTIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKA 166 R+ + + + GQ ++ K I S+ + G ++ G+T+ + + Sbjct: 124 EERKKEVDF--SDVYFKAGQSLLVKKGSKIKSIDDVKSGVTVLAVKGSTSTQNI----RK 177 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 178 KSPEAKVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDAN---YQVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQ 263 A+ +G T+ +++ M E + +K I + Sbjct: 235 GIAVQKGATDLTKVINDLLKEMKANGEYDKLYEKWIGE 272 >gi|302386907|ref|YP_003822729.1| extracellular solute-binding protein family 3 [Clostridium saccharolyticum WM1] gi|302197535|gb|ADL05106.1| extracellular solute-binding protein family 3 [Clostridium saccharolyticum WM1] Length = 289 Score = 210 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 66/291 (22%), Positives = 119/291 (40%), Gaps = 30/291 (10%) Query: 1 MYKDFFVSILCLIILF---------------FTSFSTNASILGDIKKRGFLKCGINTGLV 45 M K +L + + S A L +IK+ G +K G+ + Sbjct: 1 MKKKILGVLLGVTLAAGLLAGCSQAKDNPGTTGGASAKARTLSEIKEDGTIKIGVFSDKN 60 Query: 46 GFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105 F V +NG +G+DV F + L+ + K +++ + A R L+S ++D++ N Sbjct: 61 PFGYVDSNGKIQGYDVYFAKRLAKDLLGSEDKAEFVYVEAASRVEYLKSAKVDVILANFT 120 Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165 T R+ + A G + IS V+QL ++ V GTT E YF Sbjct: 121 VTDERKEQVDFAL--PYMKVALGVVSPDAALISDVTQLKDKTLIVVKGTTAET----YFS 174 Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225 ++ + + F+ +E A R DA++ D + + A L N V + I + Sbjct: 175 ENHQEVKLLKFDEYQEAYDALLDGRGDAFSTDNTEVLAWALQNK--GFTVGIESIGNLDT 232 Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ----VSKDTTNPD 272 +APA+ +G+ E + W + + T + K+ + V D +P+ Sbjct: 233 IAPAVQKGNKELLD---WINSEIETLGKEQFFHKDFEETLKPVYGDEIDPE 280 >gi|154483455|ref|ZP_02025903.1| hypothetical protein EUBVEN_01158 [Eubacterium ventriosum ATCC 27560] gi|149735707|gb|EDM51593.1| hypothetical protein EUBVEN_01158 [Eubacterium ventriosum ATCC 27560] Length = 295 Score = 210 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 66/296 (22%), Positives = 119/296 (40%), Gaps = 35/296 (11%) Query: 1 MYKDFFVSILCLIILFF--------------------TSFSTNASILGDIKKRGFLKCGI 40 M K +L + I+ S + A + +IKK G +K G+ Sbjct: 1 MKKKILGVLLVVGIIAGVIAGCGNSNTTQNGAENASQASATAKARTIDEIKKSGKIKIGV 60 Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 + F V NG +G+DV F + ++ + + ++ + A R L+S ++DI Sbjct: 61 FSDKNPFGYVDENGKVQGYDVYFAKRIAKDLLGSEDAVDFVYVEAASRVEYLKSAKVDIT 120 Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 N T R+ + A G + +K I+ V+QL G + V GTT E Sbjct: 121 LANFTVTDERKEQVDFAL--PYMKVALGIVSPQKAEITDVNQLKGKKLIVVKGTTAET-- 176 Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220 YF + + F+ +E A R DA++ D + + A N V + + Sbjct: 177 --YFSKNYPDVTLVKFDEYQEAYDALLDGRGDAFSTDNTEVLAWAKQNK--GFVVGVESL 232 Query: 221 ISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ----VSKDTTNPD 272 +APA+ +G+TE +W + + T + K+ ++ V D+ +P+ Sbjct: 233 GDIDTIAPAVQKGNTELL---NWLNDEIKTLAKEKFFHKDFDETLKSVYGDSIDPE 285 >gi|224438086|ref|ZP_03659025.1| amino-acid ABC transporter periplasmic solute-binding protein [Helicobacter cinaedi CCUG 18818] Length = 275 Score = 210 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 59/272 (21%), Positives = 113/272 (41%), Gaps = 18/272 (6%) Query: 1 MYKDFFVSILCLIILFFTSFS---TNASI---LGDIKKRGFLKCGINTGLVGFAEVKANG 54 M K + + +++ ++ A + IK+ G L+ G+ F + NG Sbjct: 1 MKKWIVAFLATICVIWLSACGDDKAQAQTSRGVEQIKQNGVLRVGVFGDKPPFGFIDENG 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 GFD+ + L+ + D SKI+++ A R L+S ++DI+ N T RE ++ Sbjct: 61 KNAGFDIYIAKRLAKDLLGDESKIEFILTEAASRVEFLRSNKVDIIMANFTQTKEREEAV 120 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 A Y ++ I SV L G + V GTT ++ YF ++ + Sbjct: 121 DFAK---PYMKVSLGVVSPNGEIKSVEDLKGKKLIVNKGTTADV----YFSKNHPDIELL 173 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +E+ + A + R DA D + + A + + P V +P + + +APA+ +G+ Sbjct: 174 KYEQNTQAFLALKDKRGDALAHDNTLVLAWAM--ENPGFGVGIPTLGEEDVIAPAVKKGN 231 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 E +W + G ++ ++ Sbjct: 232 VELK---TWLDEEITKLTSEGFIKEAYDKTLA 260 >gi|291616688|ref|YP_003519430.1| GltI [Pantoea ananatis LMG 20103] gi|291151718|gb|ADD76302.1| GltI [Pantoea ananatis LMG 20103] Length = 298 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 90/252 (35%), Gaps = 9/252 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQ 79 + L I G + G V F+ G+ + A++ AI +K I+ Sbjct: 26 SGTLKKINDNGVIVIGHRESSVPFSYYDNQQKVVGYSQAYSNAIAEAIKAKLNKPDLQIK 85 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T L R+ + G ++ K I Sbjct: 86 MIPITSQNRIPLLQNGTYDYECGSTTNNLERQKQAAF--SDTIFVIGTRLLVKKGSPIKD 143 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L G ++ V +GTT+E+ L M I + + R A+ D + Sbjct: 144 FDDLKGKTVVVTSGTTSEVLLHKLNDEKKMDMRIISAKDHGDSFRTLETGRAVAFMMDDA 203 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L + +P + VI+ SK + + D ++ +V T A+ G +K Sbjct: 204 LLAGERAKAKKPDDWVIIGTPQSKEAYGCMLRKDDPQFKALVDDTI---AKAQTSGQAEK 260 Query: 260 NINQVSKDTTNP 271 + K P Sbjct: 261 WFDTWFKQPIPP 272 >gi|239814553|ref|YP_002943463.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] gi|239801130|gb|ACS18197.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] Length = 295 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 45/254 (17%), Positives = 96/254 (37%), Gaps = 9/254 (3%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK---- 77 A L I + G + V F+ + GF V+ A+ A+ +K Sbjct: 21 QAADTLAKIAESGKITLAYRESSVPFSYLDGPNKPIGFSVELSNAVVEAVKKKLNKPSLQ 80 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 +Q +P+ ++ R + + +D+ +T R + A ++ G ++ K I Sbjct: 81 VQLMPVTSQNRIPLITNGTVDLECGSTTNNSARGKDVAFAVN--HFYTGTRLLVKKSSKI 138 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + L+ ++ GTT L + Y N+ ++ + + + R A+ D Sbjct: 139 KDYADLAKKTVASTTGTTNALVMRKYNTEKNLDMDIVLGKDHADAFLLVESDRAVAFAMD 198 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 L+ L P+++ ++ + + P A + + D + +V T M+ + E Sbjct: 199 DILLFGLIANAKNPADYEVVGEPLQVEPYACMLPKDDPAFKKLVDDTFIGMMKSGE---F 255 Query: 258 QKNINQVSKDTTNP 271 +K N+ P Sbjct: 256 EKLYNKWFMSPIPP 269 >gi|221069161|ref|ZP_03545266.1| extracellular solute-binding protein family 3 [Comamonas testosteroni KF-1] gi|220714184|gb|EED69552.1| extracellular solute-binding protein family 3 [Comamonas testosteroni KF-1] Length = 303 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 59/299 (19%), Positives = 115/299 (38%), Gaps = 12/299 (4%) Query: 1 MYKDFFVSILCLIILFFT----SFSTNASILGDIKKRGFLKCGINTGLVGFAE-VKANGD 55 M + ++ L+ T + + S L ++K G + G+ A + AN Sbjct: 4 MTANLTLACTALVAAMTTFGAQAQTAPGSTLEKLQKTGKVVIGVRESSAPMAYAIGANHR 63 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + G+ V+ C + + I +KI+Y+ + A+ +Q+ +D+ T L R+ + Sbjct: 64 FTGYHVELCEKVLAQI-VPSAKIEYMAITAQNTMPLVQNGTVDLGCGPTTNNLSRQKQVA 122 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 A TY + ++S QL G ++ AGTT L Y +N+K + Sbjct: 123 FAV--TTYVSQVRMAVRADSPVTSFKQLDGKTVAASAGTTAVQLLRKYSHENNVKLPTQL 180 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E + R DA+ D + L + P + I+ + + P+A + + D Sbjct: 181 GKDHFESFLMLESGRADAFVLDDNLLAGVIANAKDPKGYKIVGEALGSEPIALLMRKDDP 240 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKD 294 + V M+ + E+ K ++ P L + S + + L D Sbjct: 241 GFKKAVDDALVRMMKSGEV---AKIYDKWFMQPIPPKEMP-LNLPMSETLKQLLQAPND 295 >gi|74311191|ref|YP_309610.1| glutamate and aspartate transporter subunit [Shigella sonnei Ss046] gi|73854668|gb|AAZ87375.1| putative periplasmic binding transport protein [Shigella sonnei Ss046] gi|323163917|gb|EFZ49726.1| glutamate/aspartate periplasmic-binding protein [Shigella sonnei 53G] Length = 302 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 93/252 (36%), Gaps = 9/252 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQ 79 S L I K G + G V F+ G+ D+ A+ A+ +K ++ Sbjct: 30 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ + G + K I Sbjct: 90 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAAF--SDTIFVVGTRLLTKKGGDIKD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 148 FADLKDKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHSDSFRTLESGRAVAFMMDDA 207 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L + +P I+ S+ + + D ++ ++ T + T+ E +K Sbjct: 208 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTTAQVQTSGE---AEK 264 Query: 260 NINQVSKDTTNP 271 ++ K+ P Sbjct: 265 WFDKWFKNPIPP 276 >gi|170767654|ref|ZP_02902107.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia albertii TW07627] gi|170123142|gb|EDS92073.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia albertii TW07627] Length = 302 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 47/252 (18%), Positives = 93/252 (36%), Gaps = 9/252 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQ 79 S L I K G + G V F+ G+ D+ A+ A+ +K ++ Sbjct: 30 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T L R+ + G + K I Sbjct: 90 LIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQAAF--SDTIFVVGTRLLTKKGGDIKD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 148 FADLKDKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 207 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L + +P I+ S+ + + D ++ ++ T + T+ E +K Sbjct: 208 LLAGERAKAKKPGNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIVQVQTSGE---AEK 264 Query: 260 NINQVSKDTTNP 271 ++ K+ P Sbjct: 265 WFDKWFKNPIPP 276 >gi|107022690|ref|YP_621017.1| extracellular solute-binding protein [Burkholderia cenocepacia AU 1054] gi|116689639|ref|YP_835262.1| extracellular solute-binding protein [Burkholderia cenocepacia HI2424] gi|170732941|ref|YP_001764888.1| extracellular solute-binding protein [Burkholderia cenocepacia MC0-3] gi|254245482|ref|ZP_04938803.1| Extracellular solute-binding protein, family 13 [Burkholderia cenocepacia PC184] gi|105892879|gb|ABF76044.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia AU 1054] gi|116647728|gb|ABK08369.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia HI2424] gi|124870258|gb|EAY61974.1| Extracellular solute-binding protein, family 13 [Burkholderia cenocepacia PC184] gi|169816183|gb|ACA90766.1| extracellular solute-binding protein family 3 [Burkholderia cenocepacia MC0-3] Length = 271 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 68/278 (24%), Positives = 102/278 (36%), Gaps = 14/278 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 M + + L + L +A L DIKK G L+ F V A G Sbjct: 1 MKINTLATWLVGVALVTAGTVAHADRLDDIKKAGVLRVATFDSNPPFGYVDAKSNHIVGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD+ +AL+ + K+Q P N R L S ++D++ N T R + + Sbjct: 61 DVDYAKALADKLG---VKLQLQPTNPANRIPFLTSGKVDLVLANFTITDERAKQVDFS-- 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I YF + KK + S QL+G + GTT E+TL + F + ++ Sbjct: 116 -IPYFSSGQQFLAKKGVLKSADQLNGLRVGADKGTTNEITLREKFPKA----TIVAYDDT 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AA RA A T D L L + I IS + + +G+T Sbjct: 171 PFAFAALRAGNVQAITQDGPKLIGLLANVPDKQNYEIPAFTISNDYMGVGVPKGETRLLG 230 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277 V+ T E G + + TT + R Sbjct: 231 FVNDTLKG---LEANGRATQIYDAWFGPTTKTPLTRIF 265 >gi|169796304|ref|YP_001714097.1| amino acid ABC transporter periplasmic substrate-binding protein [Acinetobacter baumannii AYE] gi|215483763|ref|YP_002325988.1| Glutamine-binding protein precursor (GlnBP) [Acinetobacter baumannii AB307-0294] gi|294837744|ref|ZP_06782427.1| Glutamine-binding protein precursor (GlnBP) [Acinetobacter sp. 6013113] gi|294859369|ref|ZP_06797138.1| Glutamine-binding protein precursor (GlnBP) [Acinetobacter sp. 6013150] gi|301510868|ref|ZP_07236105.1| Glutamine-binding protein precursor (GlnBP) [Acinetobacter baumannii AB058] gi|169149231|emb|CAM87113.1| putative amino acid transport protein (ABC superfamily, peri_bind) [Acinetobacter baumannii AYE] gi|213987513|gb|ACJ57812.1| Glutamine-binding protein precursor (GlnBP) [Acinetobacter baumannii AB307-0294] Length = 288 Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats. Identities = 59/256 (23%), Positives = 112/256 (43%), Gaps = 15/256 (5%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 + S + IKK G ++ G+ + F + A G +GFDV+ + ++ + D +K++ Sbjct: 38 TTQTTSSIEQIKKNGVVRIGVFSDKPPFGYLDAQGKNQGFDVEIAKHIAKDLLGDENKVE 97 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 ++ A R L++ ++DI+ N T R+ + A G + K I+ Sbjct: 98 FVLTEAANRVEYLKANKVDIIFANFTVTPERKEVVDFA--KPYLKVALGVVSPKSHPITD 155 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 V+QL ++ V GTT + +F + + +E+ E A + R A D Sbjct: 156 VAQLKDKTLLVNKGTTADS----FFTKTHPEIKLQKYEQNTETFDALKDGRGTALAHDN- 210 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI--- 256 L L + P+ V + ++ + +APA+ +GD E + W + + + G+ Sbjct: 211 -LLVLAWAKENPNYTVGITNLGEQDLIAPAVKKGDKELLD---WLNQDLEKLAKEGVIHQ 266 Query: 257 -TQKNINQVSKDTTNP 271 +K + V DT NP Sbjct: 267 AYEKTLKPVYGDTINP 282 >gi|146342965|ref|YP_001208013.1| glutamate/aspartate ABC transporter substrate binding protein [Bradyrhizobium sp. ORS278] gi|146195771|emb|CAL79798.1| glutamate/aspartate ABC transporter (substrate binding protein) [Bradyrhizobium sp. ORS278] Length = 304 Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats. Identities = 52/278 (18%), Positives = 98/278 (35%), Gaps = 12/278 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTN--ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + + L L IK+ G + G+ + F+ + N G Sbjct: 1 MKQLRLFGLAFAAALCAGQVQAEDLTGTLKTIKETGAITLGVRDSSIPFSYLDDNQKPVG 60 Query: 59 FDVDFCRALSSAIFD----DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 F +D C + A+ D +++ P+ + R L + ID+ +T R+ + Sbjct: 61 FAIDICMGIVDAVKKELKLDKLEVKLNPVTSSTRIPLLANGTIDLECGSTTNNAERQKQI 120 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + ++ K I+ + L G + AGTT L + A + + I Sbjct: 121 SF--TNTHFLTASRYVSKKASNITKIDDLKGKPVVSTAGTTNIKQLTEANAARGLGINII 178 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-SPLAPAIIQG 233 + E R A+ D L +L ++ P+ +VI D SK P + + Sbjct: 179 PAKDHAEAFLMVETDRAVAFVMDDILLASLVASSKDPAAYVISSDAFSKPEPYGIMLRKD 238 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 D ++ +V + T+ E K ++ P Sbjct: 239 DPQFKKVVDAATAKIYTSGE---GAKLYDKWFMQKIPP 273 >gi|301155146|emb|CBW14610.1| unnamed protein product [Haemophilus parainfluenzae T3T1] Length = 285 Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats. Identities = 68/285 (23%), Positives = 119/285 (41%), Gaps = 28/285 (9%) Query: 1 MYKDF--FVSILCLIILFFTSFSTNA-----------SILGDIKKRGFLKCGINTGLVGF 47 M K F ++ L F + N S L I+K G ++ G+ + F Sbjct: 1 MKKTFKTLTALFATATLAFGLTACNDKEPAKDGAKTVSSLEQIQKDGKVRIGVFSDKPPF 60 Query: 48 AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 V A G +GFDV+ +A+ + D +K++++ ++A R L SK++DI+ N T Sbjct: 61 GYVDAQGKSQGFDVEIGKAIGKDLLGDENKVEFVLVDAANRAEYLLSKKVDIILANFTVT 120 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 R+ + A G + I+ + QL G ++ V GTT ++ +F + Sbjct: 121 PARKEVVDFAN--PYMKVALGVVSKDGSVITDLEQLKGKTLIVDKGTTADI----FFTKN 174 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 + FE+ E A R R DA + D + L+A P V + + + +A Sbjct: 175 YPDVKLLKFEQNTETFEALRDGRGDALSNDNTFLFAWAKQ--NPGYTVGVKNFGDQDVIA 232 Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELG----ITQKNINQVSKDT 268 PA+ + E +W + + T + G +K + V DT Sbjct: 233 PAVRKDAPELL---NWLNNEIQTLGKDGRLKQAYEKTLLPVYGDT 274 >gi|239503575|ref|ZP_04662885.1| amino acid ABC transporter periplasmic protein [Acinetobacter baumannii AB900] gi|260555371|ref|ZP_05827592.1| amino acid ABC transporter periplasmic protein [Acinetobacter baumannii ATCC 19606] gi|260411913|gb|EEX05210.1| amino acid ABC transporter periplasmic protein [Acinetobacter baumannii ATCC 19606] Length = 288 Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats. Identities = 59/256 (23%), Positives = 112/256 (43%), Gaps = 15/256 (5%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 + S + IKK G ++ G+ + F + A G +GFDV+ + ++ + D +K++ Sbjct: 38 TTQTTSSIEQIKKNGVVRIGVFSDKPPFGYLDAQGKNQGFDVEIAKHVAKDLLGDENKVE 97 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 ++ A R L++ ++DI+ N T R+ + A G + K I+ Sbjct: 98 FVLTEAANRVEYLKANKVDIIFANFTVTPERKEVVDFA--KPYLKVALGVVSPKSHPITD 155 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 V+QL ++ V GTT + +F + + +E+ E A + R A D Sbjct: 156 VAQLKDKTLLVNKGTTADS----FFTKTHPEIKLQKYEQNTETFDALKDGRGAALAHDN- 210 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI--- 256 L L + P+ V + ++ + +APA+ +GD E + W + + + G+ Sbjct: 211 -LLVLAWAKENPNYTVGITNLGEQDLIAPAVKKGDKELLD---WLNQDLEKLAKEGVIHQ 266 Query: 257 -TQKNINQVSKDTTNP 271 +K + V DT NP Sbjct: 267 AYEKTLKPVYGDTINP 282 >gi|304395669|ref|ZP_07377552.1| extracellular solute-binding protein family 3 [Pantoea sp. aB] gi|304356963|gb|EFM21327.1| extracellular solute-binding protein family 3 [Pantoea sp. aB] Length = 298 Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats. Identities = 51/275 (18%), Positives = 93/275 (33%), Gaps = 9/275 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + K +L + L I G + G V F+ G+ Sbjct: 3 LRKVALSLLLIGAAAGAAQAEDLSGTLKKINDNGVIVVGHRESSVPFSYYDNQQKVVGYS 62 Query: 61 VDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 D+ A+ AI +K ++ +P+ ++ R LQ+ D +T L R+ Sbjct: 63 QDYSNAIVEAIKAKLNKPDLQVKMIPITSQNRIPLLQNGTYDYECGSTTNNLERQKQAAF 122 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + G ++ K I + L G ++ V +GTT+E+ L + I Sbjct: 123 --SDTIFVIGTRLLVKKDGPIKDFADLKGKTVVVTSGTTSEVLLHKLNDEQKLDMRIISA 180 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + R A+ D + L + +P IL SK + + D + Sbjct: 181 KDHGDSFRTLETGRAVAFMMDDALLAGERAKAKKPDNWEILGTPQSKEAYGCMLRKDDPQ 240 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + +V T A+ G +K + K P Sbjct: 241 FKALVDETI---AKAQTSGQAEKWFDTWFKKPIPP 272 >gi|300907833|ref|ZP_07125449.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 84-1] gi|301302137|ref|ZP_07208270.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 124-1] gi|309795477|ref|ZP_07689894.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 145-7] gi|300400465|gb|EFJ84003.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 84-1] gi|300842689|gb|EFK70449.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 124-1] gi|308120852|gb|EFO58114.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 145-7] gi|315255039|gb|EFU35007.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 85-1] Length = 327 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 93/252 (36%), Gaps = 9/252 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQ 79 S L I K G + G V F+ G+ D+ A+ A+ +K ++ Sbjct: 55 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 114 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ + G + K I Sbjct: 115 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAAF--SDTIFVVGTRLLTKKGGDIKD 172 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 173 FADLKDKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 232 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L + +P I+ S+ + + D ++ ++ T + T+ E +K Sbjct: 233 LLAGERAKAKKPDNWDIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGE---AEK 289 Query: 260 NINQVSKDTTNP 271 ++ K+ P Sbjct: 290 WFDKWFKNPIPP 301 >gi|327393114|dbj|BAK10536.1| glutamate/aspartate periplasmic- binding protein precursor GltI [Pantoea ananatis AJ13355] Length = 298 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 90/252 (35%), Gaps = 9/252 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQ 79 + L I G + G V F+ G+ + A++ AI +K I+ Sbjct: 26 SGTLKKINDNGVIVIGHRESSVPFSYYDNQQKVVGYSQAYSNAIAEAIKAKLNKPDLQIK 85 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T L R+ + G ++ K I Sbjct: 86 MIPITSQNRIPLLQNGTYDYECGSTTNNLERQKQAAF--SDTIFVIGTRLLVKKGSPIKD 143 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L G ++ V +GTT+E+ L M I + + R A+ D + Sbjct: 144 FDDLKGKTVVVTSGTTSEVLLHKLNDEKKMDMRIISAKDHGDSFRTLETGRAVAFMMDDA 203 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L + +P + VI+ SK + + D ++ +V T A+ G +K Sbjct: 204 LLAGERAKAKKPDDWVIIGTPQSKEAYGCMLRKDDPQFKALVDDTI---AKAQTSGQAEK 260 Query: 260 NINQVSKDTTNP 271 + K P Sbjct: 261 WFDTWFKQPIPP 272 >gi|295677664|ref|YP_003606188.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] gi|295437507|gb|ADG16677.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] Length = 297 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 48/269 (17%), Positives = 101/269 (37%), Gaps = 8/269 (2%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + + L + + + ++ L IK G + G + F+ + G+ Sbjct: 1 MKVKKAALLLATLGLFTVGAHAQDSGTLKKIKDTGVISLGHRESSIPFSYYDDKQNVIGY 60 Query: 60 DVDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 D+ + A+ + K++ +P+ ++ R +Q+ +DI +T L R+ Sbjct: 61 SQDYAVKIVEAVKQKLNMPNLKVKLVPVTSQNRIPLVQNGTVDIECGSTTNNLERQQQAA 120 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + G + K GI L G ++ AGTT+E L + NM + I Sbjct: 121 F--TNTIFVIGTRLMTKKDSGIKDFPDLKGKTVVTTAGTTSERLLRKMNQDKNMGMNIIS 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E R A+ D + L + + P++ VI+ S+ + + D Sbjct: 179 AKDHGESFLTLSTGRAAAFMMDDALLAGERAKSSNPNDFVIVGTPQSREAYGCMLRKNDA 238 Query: 236 EWYNIVSWTH-YAMVTAEELGITQKNINQ 263 ++ + +++E I ++ Sbjct: 239 DFKKVADDAIAKVQLSSEGETIYKRWFES 267 >gi|299529534|ref|ZP_07042971.1| amino-acid ABC transporter binding protein ybeJ precursor [Comamonas testosteroni S44] gi|298722397|gb|EFI63317.1| amino-acid ABC transporter binding protein ybeJ precursor [Comamonas testosteroni S44] Length = 303 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 60/299 (20%), Positives = 118/299 (39%), Gaps = 12/299 (4%) Query: 1 MYKDFFVSILCLIILFFTSF----STNASILGDIKKRGFLKCGINTGLVGFAE-VKANGD 55 M + ++ L+ S +T+ S L ++K G + G+ A + AN Sbjct: 4 MTANITLACTALVAAMAASGVQAQTTSGSTLEKLQKTGKVVIGVRESSAPMAYAIGANHR 63 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + G+ V+ C + + I +KI+Y+ + A+ +Q+ +D+ T L R+ + Sbjct: 64 FTGYHVELCEKVLAQI-APSAKIEYMAITAQNTMPLVQNGTVDLGCGPTTNNLSRQKQVS 122 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 A TY + ++S QL G ++ AGTT L Y +N+K + Sbjct: 123 FAV--TTYVSQVRMAVRADSPVTSFKQLDGKTVAASAGTTAVQLLRKYSHDNNVKLPTQL 180 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E + R DA+ D + L + + P + I+ + + P+A + + D Sbjct: 181 GKDHFESFLMLESGRADAFVLDDNLLAGVIANSKDPRGYKIVGEALGSEPIALLMRKDDP 240 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKD 294 + V M+ + E+ K ++ P L + S + + L + D Sbjct: 241 SFKKAVDDALVRMMKSGEV---AKIYDKWFMQPIPPKEMP-LNLPMSETLKQLLQVPND 295 >gi|323517654|gb|ADX92035.1| amino acid ABC transporter periplasmic protein [Acinetobacter baumannii TCDC-AB0715] Length = 280 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 59/251 (23%), Positives = 111/251 (44%), Gaps = 15/251 (5%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S + IKK G ++ G+ + F + A G +GFDV+ + ++ + D +K++++ Sbjct: 35 SSIEQIKKNGVVRIGVFSDKPPFGYLDAQGKNQGFDVEIAKHVAKDLLGDENKVEFVLTE 94 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 A R L++ ++DI+ N T R+ + A G + K I+ V+QL Sbjct: 95 AANRVEYLKANKVDIIFANFTVTPERKEVVDFA--KPYLKVALGVVSPKSHPITDVAQLK 152 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 ++ V GTT + +F + + +E+ E A + R A D L L Sbjct: 153 DKTLLVNKGTTADS----FFTKTHPEIKLQKYEQNTETFDALKDGRGAALAHDN--LLVL 206 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI----TQKN 260 + P+ V + ++ + +APA+ +GD E + W + + + G+ +K Sbjct: 207 AWAKENPNYTVGITNLGEQDLIAPAVKKGDKELLD---WLNQDLEKLAKEGVIHQAYEKT 263 Query: 261 INQVSKDTTNP 271 + V DT NP Sbjct: 264 LKPVYGDTINP 274 >gi|296313420|ref|ZP_06863361.1| CjaA protein [Neisseria polysaccharea ATCC 43768] gi|296840052|gb|EFH23990.1| CjaA protein [Neisseria polysaccharea ATCC 43768] Length = 287 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 62/283 (21%), Positives = 119/283 (42%), Gaps = 21/283 (7%) Query: 3 KDFFVSILCLIILFFTSF------------STNASILGDIKKRGFLKCGINTGLVGFAEV 50 K S + L S+ A+ + IK++G ++ G+ F V Sbjct: 8 KALLASAAIAVGLTACGGGSSGSGDAQSSQSSGAATVAAIKEKGVIRIGVFGDKPPFGYV 67 Query: 51 KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 ANG +GFDV+ + L+ + P K++++ A R ++S ++D++ N T R Sbjct: 68 DANGKNQGFDVEIAKDLAKDLLGSPDKVEFVLTEAANRVEYVRSGKVDLILANFTKTPER 127 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 ++ A G + K K I+ ++QL ++ V GTT + +F ++ + Sbjct: 128 AEAVDFAD--PYMKVALGVVSPKGKPITDIAQLKDQTLLVNKGTTADA----FFTKNHPE 181 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 + F++ E A + R A D + L+A + P V + ++ +APA+ Sbjct: 182 VKLLKFDQNTETFDALKDGRGAALAHDNALLWAWAK--ENPDFEVAIGNLGPAEFIAPAV 239 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELG-ITQKNINQVSKDTTNPD 272 +G+ + N V+ AM L +K + V + P+ Sbjct: 240 QKGNADLLNWVNGEIAAMKKDGRLKAAYEKTLLPVYGEKVKPE 282 >gi|262278743|ref|ZP_06056528.1| amino acid ABC transporter periplasmic protein [Acinetobacter calcoaceticus RUH2202] gi|262259094|gb|EEY77827.1| amino acid ABC transporter periplasmic protein [Acinetobacter calcoaceticus RUH2202] Length = 288 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 58/251 (23%), Positives = 111/251 (44%), Gaps = 15/251 (5%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S + IKK G ++ G+ + F + A G +GFDV+ + ++ + D +K++++ Sbjct: 43 SSIEQIKKNGVVRIGVFSDKPPFGYLDAQGKNQGFDVEIAKHVAKDLLGDENKVEFVLTE 102 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 A R L++ ++DI+ N T R+ + A G + K I+ ++QL Sbjct: 103 AANRVEYLKANKVDIIFANFTVTPERKEVVDFA--KPYLKVALGVVSPKSHPITDIAQLK 160 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 ++ V GTT + +F + + +E+ E A + R A D L L Sbjct: 161 DKTLLVNKGTTADS----FFTKTHPEIKLQKYEQNTETFDALKDGRGAALAHDN--LLVL 214 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI----TQKN 260 + P+ V + ++ + +APA+ +GD E + W + + + G+ +K Sbjct: 215 AWAKENPNYTVGITNLGEQDLIAPAVKKGDKELLD---WLNQDLEKLAKEGVIHQAYKKT 271 Query: 261 INQVSKDTTNP 271 + V DT NP Sbjct: 272 LKPVYGDTINP 282 >gi|184157762|ref|YP_001846101.1| amino acid ABC transporter periplasmic protein [Acinetobacter baumannii ACICU] gi|260550585|ref|ZP_05824794.1| amino acid ABC transporter periplasmic protein [Acinetobacter sp. RUH2624] gi|294842168|ref|ZP_06786851.1| amino acid ABC transporter periplasmic protein [Acinetobacter sp. 6014059] gi|299770570|ref|YP_003732596.1| amino acid ABC transporter periplasmic protein [Acinetobacter sp. DR1] gi|183209356|gb|ACC56754.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Acinetobacter baumannii ACICU] gi|260406296|gb|EEW99779.1| amino acid ABC transporter periplasmic protein [Acinetobacter sp. RUH2624] gi|298700658|gb|ADI91223.1| amino acid ABC transporter periplasmic protein [Acinetobacter sp. DR1] gi|322508072|gb|ADX03526.1| Putative amino acid transport protein [Acinetobacter baumannii 1656-2] Length = 288 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 59/251 (23%), Positives = 111/251 (44%), Gaps = 15/251 (5%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S + IKK G ++ G+ + F + A G +GFDV+ + ++ + D +K++++ Sbjct: 43 SSIEQIKKNGVVRIGVFSDKPPFGYLDAQGKNQGFDVEIAKHVAKDLLGDENKVEFVLTE 102 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 A R L++ ++DI+ N T R+ + A G + K I+ V+QL Sbjct: 103 AANRVEYLKANKVDIIFANFTVTPERKEVVDFA--KPYLKVALGVVSPKSHPITDVAQLK 160 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 ++ V GTT + +F + + +E+ E A + R A D L L Sbjct: 161 DKTLLVNKGTTADS----FFTKTHPEIKLQKYEQNTETFDALKDGRGAALAHDN--LLVL 214 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI----TQKN 260 + P+ V + ++ + +APA+ +GD E + W + + + G+ +K Sbjct: 215 AWAKENPNYTVGITNLGEQDLIAPAVKKGDKELLD---WLNQDLEKLAKEGVIHQAYEKT 271 Query: 261 INQVSKDTTNP 271 + V DT NP Sbjct: 272 LKPVYGDTINP 282 >gi|330823278|ref|YP_004386581.1| ABC transporter periplasmic subunit [Alicycliphilus denitrificans K601] gi|329308650|gb|AEB83065.1| ABC-type transporter, periplasmic subunit family 3 [Alicycliphilus denitrificans K601] Length = 299 Score = 210 bits (534), Expect = 4e-52, Method: Composition-based stats. Identities = 51/276 (18%), Positives = 109/276 (39%), Gaps = 10/276 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + ++ ++ + L IK G + G+ A +G + GF Sbjct: 1 MKKHLLAAAITVLAAG-SAIAQANDTLAKIKSSGAITLGVRESSGALAYTLGDGKYVGFH 59 Query: 61 VDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 + ++ + +I+Y P+ ++ R + + +D+ +T L R+ + Sbjct: 60 TEMAERVARDLQKKLGLSKLEIKYQPVTSQNRIPLVVNGTVDLECGSTTNNLARQKDVAF 119 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 A TY + + GI+ + L+G +I GTT+ TL +A M + ++ Sbjct: 120 AN--TTYVEEVRIAVKANSGINDIKDLNGKTIVTTTGTTSVQTLRKNKRAEGMNFREVMG 177 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + R DA+ D S L + P++ I+ + +S P+A + + D Sbjct: 178 KDHADSFLMLETGRADAFIMDGSILAGNISKSKSPNDFKIVGEALSVEPIACMLRKDDPA 237 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272 + V + A + + G K+ ++ P+ Sbjct: 238 FKKAVDESIVAQI---KDGTLAKSYDKWFMQPIPPN 270 >gi|319762438|ref|YP_004126375.1| extracellular solute-binding protein family 3 [Alicycliphilus denitrificans BC] gi|330825711|ref|YP_004389014.1| ABC transporter periplasmic subunit [Alicycliphilus denitrificans K601] gi|317116999|gb|ADU99487.1| extracellular solute-binding protein family 3 [Alicycliphilus denitrificans BC] gi|329311083|gb|AEB85498.1| ABC-type transporter, periplasmic subunit family 3 [Alicycliphilus denitrificans K601] Length = 300 Score = 210 bits (534), Expect = 4e-52, Method: Composition-based stats. Identities = 53/264 (20%), Positives = 103/264 (39%), Gaps = 9/264 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L+ F A L IK G + G+ + + A+G GF Sbjct: 1 MKK--YLAACALVAQGFLHVPVQAQTLEKIKASGAVTMGVRDSSIPLSYAGADGAPIGFH 58 Query: 61 VDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 VD CR + + + +Y + ++ R + + IDI +T T R+ + Sbjct: 59 VDICRKVLEDVQAQLGLARLETRYQLVTSQNRIPLVANGTIDIECGSTTNTQARQKEVAF 118 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH-PIV 175 A TY + + GI SV L+G + GTT+ L + ++ + Sbjct: 119 AL--TTYVEEVRLAVRADSGIRSVRDLAGKVVVATTGTTSVQHLRRKVRELGLELKDVSL 176 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + + R DA+ D L A + S ++ ++++ P+A + + D Sbjct: 177 GKDHADSFLLLESGRADAWVLDQGVLRASIANARQSSAFSVVGEVLNAEPIAIMVRKDDP 236 Query: 236 EWYNIVSWTHYAMVTAEELGITQK 259 + V T ++ + E+ + K Sbjct: 237 GFKRAVDVTIRKLLASGEMQVLWK 260 >gi|240013150|ref|ZP_04720063.1| putative ABC transporter, periplasmic binding protein, amino acid [Neisseria gonorrhoeae DGI18] gi|240116885|ref|ZP_04730947.1| putative ABC transporter, periplasmic binding protein, amino acid [Neisseria gonorrhoeae PID1] gi|240120221|ref|ZP_04733183.1| putative ABC transporter, periplasmic binding protein, amino acid [Neisseria gonorrhoeae PID24-1] Length = 284 Score = 209 bits (533), Expect = 4e-52, Method: Composition-based stats. Identities = 63/280 (22%), Positives = 120/280 (42%), Gaps = 18/280 (6%) Query: 3 KDFFVSILCLIILFF---------TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 K S + L +S S+ A+ + IK++G ++ G+ F V AN Sbjct: 8 KALLASAAIAVGLTACGGGSGDAQSSQSSGAATVAAIKEKGVIRIGVFGDKPPFGYVDAN 67 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G +GFDV+ + L+ + P K++++ A R ++S ++D++ N T R + Sbjct: 68 GKNQGFDVEIAKDLAKDLLGSPDKVEFVLTEAANRVEYVRSGKVDLILANFTQTPERAEA 127 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + A G + K K I+ ++QL ++ V GTT + +F + + Sbjct: 128 VDFAD--PYMKVALGVVSPKNKPITDMAQLKDQTLLVNKGTTADA----FFTKSHPEVKL 181 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + F++ E A + R A D + L+A + P+ V + ++ +APA+ +G Sbjct: 182 LKFDQNTETFDALKDGRGVALAHDNALLWAWAK--ENPNFEVAIGNLGPAEFIAPAVQKG 239 Query: 234 DTEWYNIVSWTHYAMVTAEELG-ITQKNINQVSKDTTNPD 272 + + N V+ AM L +K V + P+ Sbjct: 240 NADLLNWVNGEIAAMKKDGRLKAAYEKTFLPVYGEKVKPE 279 >gi|115352263|ref|YP_774102.1| extracellular solute-binding protein [Burkholderia ambifaria AMMD] gi|115282251|gb|ABI87768.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia ambifaria AMMD] Length = 330 Score = 209 bits (533), Expect = 4e-52, Method: Composition-based stats. Identities = 47/273 (17%), Positives = 97/273 (35%), Gaps = 9/273 (3%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + V+ L + + L I++ G + G V F+ V A+G GF D Sbjct: 37 RSLLVAACALACGASLAAEPLSGTLEKIRQAGLISIGHRETSVPFSYVDASGKVIGFSQD 96 Query: 63 FCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 C + +A+ K ++++P+ ++ R +Q+ +D+ T R + Sbjct: 97 LCDRVIAAVKARTGKPDLQVRFIPVTSQNRIPLVQNGTVDLECGVTTNLAARHAQVAF-- 154 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + + GI L+G ++ GTT+E L + M I + Sbjct: 155 STTFFVATTRLLTRTSSGIRDFPDLAGKTVVTNQGTTSERLLRKMNEEKKMNMQIISAKD 214 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E + R AY D L ++ +P++ I+ S + + D ++ Sbjct: 215 YGEGRLTLESGRAAAYMMDDVLLAGVRQLAAKPADWAIVGTPQSSEAYGFMLRKDDPQFK 274 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 +V ++ + E+ ++ P Sbjct: 275 ALVDGVLVQLMKSGEIN---ALYDKWFMKPVPP 304 >gi|288550055|ref|ZP_05969127.2| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Enterobacter cancerogenus ATCC 35316] gi|288316573|gb|EFC55511.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Enterobacter cancerogenus ATCC 35316] Length = 316 Score = 209 bits (533), Expect = 4e-52, Method: Composition-based stats. Identities = 50/277 (18%), Positives = 98/277 (35%), Gaps = 13/277 (4%) Query: 3 KDFFVSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 + ++L + + + S L I K G + G V F+ G Sbjct: 19 RKLATAMLVMGMSAGVVHAEDAPAAGSTLAKIAKNGVIVVGHRESSVPFSYYDNTQKVVG 78 Query: 59 FDVDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + D+ A+ A+ +K ++ +P+ ++ R LQ+ D +T L R+ Sbjct: 79 YSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQA 138 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + G + K I + L G ++ V +GTT+E+ L M I Sbjct: 139 AF--SDTIFVVGTRLLTKKGGDIKDFADLKGKAVVVTSGTTSEVLLHKLNDDKKMDMRII 196 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + + R A+ D + L + +P I+ SK + + D Sbjct: 197 SAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGTAQSKEAYGCMLRKDD 256 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 ++ ++ T T+ E K ++ K+ P Sbjct: 257 ADFKKLIDDTIAQAQTSGE---AAKWFDKWFKNPIPP 290 >gi|121608200|ref|YP_996007.1| extracellular solute-binding protein [Verminephrobacter eiseniae EF01-2] gi|121552840|gb|ABM56989.1| extracellular solute-binding protein, family 3 [Verminephrobacter eiseniae EF01-2] Length = 373 Score = 209 bits (533), Expect = 4e-52, Method: Composition-based stats. Identities = 56/277 (20%), Positives = 106/277 (38%), Gaps = 11/277 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + + + L S L IK G + G+ G + NG + GF Sbjct: 73 MKKHLLAATVTSLCLSAGSVGAQTGDTLAKIKASGSVTLGVRESS-GLSYTLGNGKYVGF 131 Query: 60 DVDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + + + I +Y P+ ++ R + + +D+ +T T R+ + Sbjct: 132 HTEMAERILADIQKQLGLATLTTKYQPVTSQNRIPLVTNGTVDLECGSTTNTTARQKDVA 191 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 A TY + GI+S+ L+G ++ GTT+ TL + +A + + + Sbjct: 192 FAM--TTYVEEIRTATKANSGITSIRDLNGKTVATTTGTTSVQTLRRHQRADGVDFKEVF 249 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + R DAY D+S L A + PS++ I+ +++S P+A + + D Sbjct: 250 GKDHADSFLLLETGRADAYVMDVSILAANISKSKAPSDYKIVGEVLSVEPIACMLRKDDP 309 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272 + V + V G K ++ P Sbjct: 310 AFKKAVDDSIKRQVA---DGSLAKLYDKWFMQPVPPS 343 >gi|59802322|ref|YP_209034.1| putative ABC transporter, periplasmic binding protein, amino acid [Neisseria gonorrhoeae FA 1090] gi|239999903|ref|ZP_04719827.1| putative ABC transporter, periplasmic binding protein, amino acid [Neisseria gonorrhoeae 35/02] gi|240015593|ref|ZP_04722133.1| putative ABC transporter, periplasmic binding protein, amino acid [Neisseria gonorrhoeae FA6140] gi|240081799|ref|ZP_04726342.1| putative ABC transporter, periplasmic binding protein, amino acid [Neisseria gonorrhoeae FA19] gi|240114683|ref|ZP_04728745.1| putative ABC transporter, periplasmic binding protein, amino acid [Neisseria gonorrhoeae PID18] gi|240122519|ref|ZP_04735475.1| putative ABC transporter, periplasmic binding protein, amino acid [Neisseria gonorrhoeae PID332] gi|240126633|ref|ZP_04739519.1| putative ABC transporter, periplasmic binding protein, amino acid [Neisseria gonorrhoeae SK-92-679] gi|240127229|ref|ZP_04739890.1| putative ABC transporter, periplasmic binding protein, amino acid [Neisseria gonorrhoeae SK-93-1035] gi|260441510|ref|ZP_05795326.1| putative ABC transporter, periplasmic binding protein, amino acid [Neisseria gonorrhoeae DGI2] gi|291044873|ref|ZP_06570582.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|293397951|ref|ZP_06642157.1| glutamine transport system substrate-binding protein [Neisseria gonorrhoeae F62] gi|59719217|gb|AAW90622.1| putative ABC transporter, periplasmic binding protein, amino acid [Neisseria gonorrhoeae FA 1090] gi|291011767|gb|EFE03763.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|291611897|gb|EFF40966.1| glutamine transport system substrate-binding protein [Neisseria gonorrhoeae F62] gi|317165198|gb|ADV08739.1| putative ABC transporter, periplasmic binding protein, amino acid [Neisseria gonorrhoeae TCDC-NG08107] Length = 284 Score = 209 bits (533), Expect = 4e-52, Method: Composition-based stats. Identities = 63/280 (22%), Positives = 121/280 (43%), Gaps = 18/280 (6%) Query: 3 KDFFVSILCLIILFF---------TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 K S + L +S S+ A+ + IK++G ++ G+ F V AN Sbjct: 8 KALLASAAIAVGLTACGGGSGDAQSSQSSGAATVAAIKEKGVIRIGVFGDKPPFGYVDAN 67 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G +GFDV+ + L+ + P K++++ A R ++S ++D++ N T R + Sbjct: 68 GKNQGFDVEIAKDLAKDLLGSPDKVEFVLTEAANRVEYVRSGKVDLILANFTQTPERAEA 127 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + A G + K K I+ ++QL ++ V GTT + +F + + Sbjct: 128 VDFAD--PYMKVALGVVSPKNKPITDMAQLKDQTLLVNKGTTADA----FFTKSHPEVKL 181 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + F++ E A + R A D + L+A + P+ V + ++ +APA+ +G Sbjct: 182 LKFDQNTETFDALKDGRGVALAHDNALLWAWAK--ENPNFEVAIGNLGPAEFIAPAVQKG 239 Query: 234 DTEWYNIVSWTHYAMVTAEELG-ITQKNINQVSKDTTNPD 272 + + N V+ AM L +K + V + P+ Sbjct: 240 NADLLNWVNGEIAAMKKDGRLKAAYEKTLLPVYGEKVKPE 279 >gi|238790776|ref|ZP_04634535.1| Glutamate/aspartate periplasmic-binding protein [Yersinia frederiksenii ATCC 33641] gi|238721134|gb|EEQ12815.1| Glutamate/aspartate periplasmic-binding protein [Yersinia frederiksenii ATCC 33641] Length = 312 Score = 209 bits (533), Expect = 5e-52, Method: Composition-based stats. Identities = 48/254 (18%), Positives = 96/254 (37%), Gaps = 9/254 (3%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS----K 77 + L IK G + G V F+ G+ D+ + AI + + Sbjct: 38 ASVDTLKKIKDNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNLIVDAIKKKLNAPDLQ 97 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++ +P+ ++ R LQ+ D +T L R+ + G + K + Sbjct: 98 VKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQQQAAF--SNTIFVVGTRLLTKKGSEV 155 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 L+G ++ V +GTT+E+ L + M I + + + R A+ D Sbjct: 156 KDFKDLAGKAVVVTSGTTSEVLLNKLNEKDKMNMRIISAKDHGDSFRTLESGRAVAFMMD 215 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 + L + +P + I+ S+ + + D + N+V T TA+ G+ Sbjct: 216 DALLAGERAKAKKPDQWDIVGTPQSQEAYGCMLRKNDPAFKNLVDETI---ATAQTGGVA 272 Query: 258 QKNINQVSKDTTNP 271 +K+ ++ K+ P Sbjct: 273 EKSFDRWFKNPIPP 286 >gi|82543098|ref|YP_407045.1| glutamate and aspartate transporter subunit [Shigella boydii Sb227] gi|157157607|ref|YP_001461825.1| glutamate and aspartate transporter subunit [Escherichia coli E24377A] gi|191168682|ref|ZP_03030462.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli B7A] gi|81244509|gb|ABB65217.1| putative periplasmic binding transport protein [Shigella boydii Sb227] gi|157079637|gb|ABV19345.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli E24377A] gi|190901274|gb|EDV61043.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli B7A] gi|320174704|gb|EFW49836.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Shigella dysenteriae CDC 74-1112] gi|320185366|gb|EFW60136.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Shigella flexneri CDC 796-83] gi|332097776|gb|EGJ02750.1| glutamate/aspartate periplasmic-binding protein [Shigella boydii 3594-74] Length = 302 Score = 209 bits (533), Expect = 5e-52, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 93/252 (36%), Gaps = 9/252 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQ 79 S L I K G + G V F+ G+ D+ A+ A+ +K ++ Sbjct: 30 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ + G + K I Sbjct: 90 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAAF--SDTIFVVGTRLLTKKGGDIKD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 148 FADLKDKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 207 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L + +P I+ S+ + + D ++ ++ T + T+ E +K Sbjct: 208 LLAGERAKAKKPDNWDIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGE---AEK 264 Query: 260 NINQVSKDTTNP 271 ++ K+ P Sbjct: 265 WFDKWFKNPIPP 276 >gi|309379285|emb|CBX22058.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 284 Score = 209 bits (533), Expect = 5e-52, Method: Composition-based stats. Identities = 63/280 (22%), Positives = 119/280 (42%), Gaps = 18/280 (6%) Query: 3 KDFFVSILCLIILFF---------TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 K S + L S S+ A + IK++G ++ G+ F V AN Sbjct: 8 KALLASAAIAVGLTACGGGSGDTQASQSSGAVTVAAIKEKGVIRIGVFGDKPPFGYVDAN 67 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G +GFDV+ + L+ + P K++++ A R ++S ++D++ N T R + Sbjct: 68 GKNQGFDVEIAKDLAKDLLGSPDKVEFVLTEAANRVEYVRSGKVDLILANFTKTPERAEA 127 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + A G + K K I+ ++QL ++ V GTT + +F + + Sbjct: 128 VDFAD--PYMKVALGVVSPKGKPITDIAQLKDQTLLVNKGTTADA----FFTKSHPEVKL 181 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + F++ E A + R A D + L+A + P+ V + ++ +APA+ +G Sbjct: 182 LKFDQNTETFDALKDGRGAALAHDNALLWAWAK--ENPNFEVAIGNLGPAEFIAPAVQKG 239 Query: 234 DTEWYNIVSWTHYAMVTAEELG-ITQKNINQVSKDTTNPD 272 + + N V+ AM L +K + V + P+ Sbjct: 240 NADLLNWVNGEIAAMKKDGRLKAAYEKTLLPVYGEKVKPE 279 >gi|268595712|ref|ZP_06129879.1| antigenic protein [Neisseria gonorrhoeae 35/02] gi|268597898|ref|ZP_06132065.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] gi|268549101|gb|EEZ44519.1| antigenic protein [Neisseria gonorrhoeae 35/02] gi|268551686|gb|EEZ46705.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] Length = 282 Score = 209 bits (533), Expect = 5e-52, Method: Composition-based stats. Identities = 63/280 (22%), Positives = 121/280 (43%), Gaps = 18/280 (6%) Query: 3 KDFFVSILCLIILFF---------TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 K S + L +S S+ A+ + IK++G ++ G+ F V AN Sbjct: 6 KALLASAAIAVGLTACGGGSGDAQSSQSSGAATVAAIKEKGVIRIGVFGDKPPFGYVDAN 65 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G +GFDV+ + L+ + P K++++ A R ++S ++D++ N T R + Sbjct: 66 GKNQGFDVEIAKDLAKDLLGSPDKVEFVLTEAANRVEYVRSGKVDLILANFTQTPERAEA 125 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + A G + K K I+ ++QL ++ V GTT + +F + + Sbjct: 126 VDFAD--PYMKVALGVVSPKNKPITDMAQLKDQTLLVNKGTTADA----FFTKSHPEVKL 179 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + F++ E A + R A D + L+A + P+ V + ++ +APA+ +G Sbjct: 180 LKFDQNTETFDALKDGRGVALAHDNALLWAWAK--ENPNFEVAIGNLGPAEFIAPAVQKG 237 Query: 234 DTEWYNIVSWTHYAMVTAEELG-ITQKNINQVSKDTTNPD 272 + + N V+ AM L +K + V + P+ Sbjct: 238 NADLLNWVNGEIAAMKKDGRLKAAYEKTLLPVYGEKVKPE 277 >gi|312602223|ref|YP_004022068.1| hypothetical protein RBRH_00467 [Burkholderia rhizoxinica HKI 454] gi|312169537|emb|CBW76549.1| unnamed protein product [Burkholderia rhizoxinica HKI 454] Length = 283 Score = 209 bits (533), Expect = 5e-52, Method: Composition-based stats. Identities = 70/279 (25%), Positives = 108/279 (38%), Gaps = 14/279 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFD 60 K +S L +L + +A L DIKK G L+ F V A G D Sbjct: 14 MKSTVLSTLLAGLLIVAAGVAHADRLDDIKKAGVLRVATFDSNPPFGFVDAKTHHIVGLD 73 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+ +AL+ + K++ P N R L S+++D++ N T R + + Sbjct: 74 VDYAKALADKLG---VKLELQPTNPANRIPFLTSRKVDLVLANFTITEERAKQVDFS--- 127 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 I YF + KK + S QL+G I GT E+TL + F + ++ Sbjct: 128 IPYFASGQQFLAKKGVLKSAEQLNGLRIGADKGTINEITLREKFPQA----TIVAYDDTP 183 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 AA RA A T D L L + I IS + I +G+T Sbjct: 184 FAFAALRAGNVQAITQDGPKLVGLLANVPDKQNYEIPAFTISNDYMGVGIPKGETRLVAF 243 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGI 279 V+ T E+ G+ ++ N+ T+ + R I Sbjct: 244 VNDTLRG---LEKGGMAEQIYNRWFGPRTSTPLPRLFKI 279 >gi|307253362|ref|ZP_07535233.1| hypothetical protein appser6_18560 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306859041|gb|EFM91083.1| hypothetical protein appser6_18560 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 298 Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats. Identities = 60/278 (21%), Positives = 119/278 (42%), Gaps = 17/278 (6%) Query: 3 KDFFVSILCLIILFF------TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 K + + L ST + IK++G ++ G+ F V ANG Sbjct: 28 KTLLATAITAFALTACDNANNAQSSTAKDSVAQIKEKGVIRIGVFGDKPPFGYVDANGKN 87 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +GFDV+ + +++ + P K++++ A R L+S ++D++ N T R + + Sbjct: 88 QGFDVEIAKEIANDLLGSPDKVEFVLTEAANRVEYLKSNKVDLILANFTKTPER--AEVV 145 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F G + K IS + QL G ++ V GTT + YF ++ + + + F Sbjct: 146 DFATPYMNVALGVVSPKGALISDLKQLEGKTLLVNKGTTADA----YFTKNHPEINLLKF 201 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 ++ E A + R A D + ++A + P+ V + + +APA+ +G+ Sbjct: 202 DQNTETFDALKDGRGVALAHDNALVWAWAK--ENPTFDVAIGSVGPAEQIAPAVQKGNQA 259 Query: 237 WYNIVSWTHYAMVTAEELG-ITQKNINQVSKDTTNPDV 273 ++++ T +L +K + V D P++ Sbjct: 260 LLDVINKEIAEFKTNGKLKAAYEKTLVPVYGD--KPEL 295 >gi|50085186|ref|YP_046696.1| glutamate/aspartate ABC transporter substrate-binding protein [Acinetobacter sp. ADP1] gi|49531162|emb|CAG68874.1| glutamate/aspartate transport protein (ABC superfamily, peri_bind) [Acinetobacter sp. ADP1] Length = 297 Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats. Identities = 54/272 (19%), Positives = 100/272 (36%), Gaps = 10/272 (3%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 VS + + + A L IK G + G + V A G G+ VD Sbjct: 7 SLLVSAFMICTVGGATQVQAADTLAKIKSSGKIIIGHRESSDPISYVVA-GKPVGYAVDI 65 Query: 64 CRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 C ++ I + K++Y + + R L S ID+ T + R+ +G + Sbjct: 66 CNNFANDIKKELKMPNLKVEYKAVTSSTRIPELLSGNIDMECGTTTNSKQRQQQVGFSTN 125 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + GI S++ L+G ++ GTT++ + K ++ I + Sbjct: 126 --YYATEVRMAVKANSGIKSLADLNGKAVVTTQGTTSDKYIKMNEKGQSINVQNIYGKDH 183 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + A + R A+ D + L L + P E I+ ++S P I + D ++ Sbjct: 184 ADSFAMMASGRAAAFVMDDNILAGLIAKSSNPKEFAIVGPVLSSEPYGIMIAKDDPKFKA 243 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + T M ++ K + + P Sbjct: 244 LADRTVTGMWKTGQMD---KLYKKWFQSAIPP 272 >gi|225076166|ref|ZP_03719365.1| hypothetical protein NEIFLAOT_01198 [Neisseria flavescens NRL30031/H210] gi|224952509|gb|EEG33718.1| hypothetical protein NEIFLAOT_01198 [Neisseria flavescens NRL30031/H210] Length = 287 Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats. Identities = 63/284 (22%), Positives = 120/284 (42%), Gaps = 21/284 (7%) Query: 2 YKDFFVSILCLIILFFTSF------------STNASILGDIKKRGFLKCGINTGLVGFAE 49 +K + L S+ A+ + IK++G ++ G+ F Sbjct: 7 FKALLAFAAIAVGLTACGGGSSGSGDAQSSQSSGAATVAAIKEKGVIRIGVFGDKPPFGY 66 Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 V ANG +GFDV+ + L+ + P K++++ A R ++S ++D++ N T Sbjct: 67 VDANGKNQGFDVEIAKDLAKDLLGSPDKVEFVLTEAANRVEYVRSGKVDLILANFTKTPE 126 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 R ++ A G + K K I+ V+QL ++ V GTT + +F + Sbjct: 127 RAEAVDFAD--PYMKVALGVVSPKDKPITDVAQLKDQTLLVNKGTTADA----FFTKSHP 180 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + + F++ E A + R A D + L+A + P+ V + ++ +APA Sbjct: 181 EVKLLKFDQNTETFDALKDGRGVALAHDNALLWAWAK--ENPNFEVAIGNLGPAEFIAPA 238 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELG-ITQKNINQVSKDTTNPD 272 + +G+T+ N V+ AM L +K + V + P+ Sbjct: 239 VQKGNTDLLNWVNGEIAAMKKDGRLKAAYEKTLLPVYGEKVKPE 282 >gi|221212966|ref|ZP_03585942.1| extracellular solute-binding protein, family 3 [Burkholderia multivorans CGD1] gi|221167179|gb|EED99649.1| extracellular solute-binding protein, family 3 [Burkholderia multivorans CGD1] Length = 312 Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats. Identities = 70/278 (25%), Positives = 102/278 (36%), Gaps = 14/278 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW-KGF 59 M L + L + A L DIKK G L+ F V A + G Sbjct: 42 MKIHTLAKALVAVALIAAGTAAQADRLDDIKKAGVLRVATFDSNPPFGYVDAKTNRIVGL 101 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD+ +AL+ + K+Q P N R L S ++D++ N T R + + Sbjct: 102 DVDYAKALADKLG---VKLQLQPTNPANRIPFLTSGKVDLVLANFTITEERAKQVDFS-- 156 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I YF + KK + S QL+G I GTT E+TL + F + ++ Sbjct: 157 -IPYFSSGQQFLAKKGVLKSADQLNGLRIGADKGTTNEITLREKFPKA----TIVAYDDT 211 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AA RA A T D L L + I P IS + + +G+T Sbjct: 212 PFAFAALRAGNVQAITQDGPKLIGLLANVPDKQNYEIPPFTISNDYMGVGVPKGETRLLG 271 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277 V+ T E G + + TT + R Sbjct: 272 FVNDTLKG---LEANGRAAQIYDAWFGPTTKTPLARIF 306 >gi|159794822|pdb|2IA4|B Chain B, Crystal Structure Of Novel Amino Acid Binding Protein From Shigella Flexneri Length = 280 Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats. Identities = 46/257 (17%), Positives = 93/257 (36%), Gaps = 9/257 (3%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK- 77 + S L I K G + G V F+ G+ D+ A+ A+ +K Sbjct: 1 AAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKP 60 Query: 78 ---IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 ++ +P+ ++ R LQ+ D +T + R+ + G + K Sbjct: 61 DLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAAF--SDTIFVVGTRLLTKKG 118 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I + L G ++ V +GTT+E+ L + I + + + R A+ Sbjct: 119 GDIKDFADLKGKAVVVTSGTTSEVLLNKLNEEQKXNXRIISAKDHGDSFRTLESGRAVAF 178 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D + L + +P I+ S+ + + D ++ + T + T+ E Sbjct: 179 XXDDALLAGERAKAKKPDNWDIVGKPQSQEAYGCXLRKDDPQFKKLXDDTIAQVQTSGE- 237 Query: 255 GITQKNINQVSKDTTNP 271 +K ++ K+ P Sbjct: 238 --AEKWFDKWFKNPIPP 252 >gi|240850842|ref|YP_002972242.1| glutamate-aspartate ABC transporter periplasmic component GltI [Bartonella grahamii as4aup] gi|240267965|gb|ACS51553.1| glutamate-aspartate ABC transporter periplasmic component GltI [Bartonella grahamii as4aup] Length = 301 Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats. Identities = 60/274 (21%), Positives = 108/274 (39%), Gaps = 9/274 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + I I F + L IK+ G + G+ G A N + GF Sbjct: 1 MKKSLLMFIAATAIGFTSVAHAEHDTLEKIKRTGEITLGVRESS-GLAYALGNNKYVGFH 59 Query: 61 VDFCRALSSAIFDD---PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 + + I P KI YLP+ ++ R L++K D +T + R A Sbjct: 60 TEMAERIIDDISKKIAKPIKIHYLPITSQNRIPLLKNKTYDFECGSTTNDIARSKEAAFA 119 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 TY + + K I S+ L+G ++ GTT+ + +A N+++ + + Sbjct: 120 --YTTYIEEVRIAVKKNSNIKSLDDLNGKTVATTTGTTSVQLIRKNKRAKNIQFKVLKGK 177 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + + + DA+ D S L + PS++VIL ++S P+A + D ++ Sbjct: 178 DHGDSFLLLESGKADAFVMDASILAGHIAKSKNPSDYVILDTVLSVEPIACMLRLNDKKF 237 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 ++ + + E L +K N+ P Sbjct: 238 EQTINDSIVRQIKDESL---EKLYNKWFMKPIPP 268 >gi|307246618|ref|ZP_07528689.1| hypothetical protein appser1_18140 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306852490|gb|EFM84724.1| hypothetical protein appser1_18140 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] Length = 298 Score = 209 bits (532), Expect = 6e-52, Method: Composition-based stats. Identities = 59/278 (21%), Positives = 119/278 (42%), Gaps = 17/278 (6%) Query: 3 KDFFVSILCLIILFF------TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 K + + L ST + IK++G ++ G+ F V ANG Sbjct: 28 KTLLATAITAFALTACDNANNAQSSTAKDSVAQIKEKGVIRIGVFGDKPPFGYVDANGKN 87 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +GFDV+ + +++ + P K++++ A R L+S ++D++ N T R + + Sbjct: 88 QGFDVEIAKEIANDLLGSPDKVEFVLTEAANRVEYLKSNKVDLILANFTKTPER--AEVV 145 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F G + K I+ + QL G ++ V GTT + YF ++ + + + F Sbjct: 146 DFAAPYMNVALGVVSPKGALITDLKQLEGKTLLVNKGTTADA----YFTKNHPEINLLKF 201 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 ++ E A + R A D + ++A + P+ V + + +APA+ +G+ Sbjct: 202 DQNTETFDALKDGRGVALAHDNALVWAWAK--ENPTFDVAIGSVGPAEQIAPAVQKGNQA 259 Query: 237 WYNIVSWTHYAMVTAEELG-ITQKNINQVSKDTTNPDV 273 ++++ T +L +K + V D P++ Sbjct: 260 LLDVINKEIAEFKTNGKLKAAYEKTLVPVYGD--KPEL 295 >gi|259909117|ref|YP_002649473.1| glutamate and aspartate transporter subunit [Erwinia pyrifoliae Ep1/96] gi|224964739|emb|CAX56256.1| Glutamate/aspartate periplasmic-binding protein [Erwinia pyrifoliae Ep1/96] gi|283479144|emb|CAY75060.1| putative glutamate/aspartate ABC transport system, periplasmic component [Erwinia pyrifoliae DSM 12163] Length = 309 Score = 209 bits (532), Expect = 6e-52, Method: Composition-based stats. Identities = 59/287 (20%), Positives = 103/287 (35%), Gaps = 24/287 (8%) Query: 4 DFFVSILCLIILFFTSFSTNAS---------------ILGDIKKRGFLKCGINTGLVGFA 48 F LCL + S +A L I K G + G V F+ Sbjct: 2 KFRKLGLCLALAGIASGIAHAEDAKAPAAADAQQQTHTLEKIAKSGVIVVGHRESSVPFS 61 Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNT 104 G+ D+ A+ +AI +K ++ LP+ ++ R LQ+ D +T Sbjct: 62 YYHNQQKVVGYSQDYSDAIVAAIKKKLNKPDLQVKMLPVTSQNRIPLLQNGTYDFECGST 121 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164 + R+ + + G ++ K I + L G ++ V +GTT+E+ L Sbjct: 122 TNNIERQKQASFSNSI--FVVGTRLLVKKGGVIKEFADLKGKTVVVTSGTTSEILLNKLN 179 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 M + + + + R A+ D + L + +PSE IL S Sbjct: 180 DEQKMGIRIVSAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPSEWEILGTPQSHE 239 Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + +GD E+ ++ T V A+ G K ++ K P Sbjct: 240 AYGCMLRKGDNEFKKLMDDTI---VQAQTSGEAAKWFDKWFKQPVPP 283 >gi|209517530|ref|ZP_03266370.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] gi|209502063|gb|EEA02079.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] Length = 297 Score = 209 bits (532), Expect = 6e-52, Method: Composition-based stats. Identities = 47/269 (17%), Positives = 99/269 (36%), Gaps = 8/269 (2%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + + L + + + ++ L IK G + G + F+ + G+ Sbjct: 1 MKIKKAALLLATLGLFTVGAHAQDSGTLKKIKDTGVISLGHRESSIPFSFYDDKQNVIGY 60 Query: 60 DVDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 D+ + A+ + K++ +P+ ++ R +Q+ +DI +T L R+ Sbjct: 61 SQDYALKIVEAVKQKLNMPNLKVKLVPVTSQNRIPLVQNGTVDIECGSTTNNLERQQQAA 120 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + G + K GI L G ++ AGTT+E L + +M + I Sbjct: 121 F--TNTIFVIGTRLMTKKDSGIKDFPDLKGKTVVTTAGTTSERLLRKMNQDKSMGMNIIS 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E R A+ D + L + P + VI+ S+ + + D Sbjct: 179 AKDHGESFLTLSTGRAAAFMMDDALLAGERAKASNPGDFVIVGTPQSREAYGCMLRKNDA 238 Query: 236 EWYNIVSWTH-YAMVTAEELGITQKNINQ 263 ++ + +++E I ++ Sbjct: 239 DFKKVADDAIAKVQLSSEGETIYKRWFES 267 >gi|300951156|ref|ZP_07165019.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 116-1] gi|300959230|ref|ZP_07171305.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 175-1] gi|301643929|ref|ZP_07243956.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 146-1] gi|331641159|ref|ZP_08342294.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli H736] gi|300314159|gb|EFJ63943.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 175-1] gi|300449559|gb|EFK13179.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 116-1] gi|301077699|gb|EFK92505.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 146-1] gi|331037957|gb|EGI10177.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli H736] Length = 327 Score = 208 bits (531), Expect = 6e-52, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 93/252 (36%), Gaps = 9/252 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQ 79 S L I K G + G V F+ G+ D+ A+ A+ +K ++ Sbjct: 55 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 114 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ + G + K I Sbjct: 115 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAAF--SDTIFVVGTRLLTKKGGDIKD 172 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 173 FANLKDKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 232 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L + +P I+ S+ + + D ++ ++ T + T+ E +K Sbjct: 233 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGE---AEK 289 Query: 260 NINQVSKDTTNP 271 ++ K+ P Sbjct: 290 WFDKWFKNPIPP 301 >gi|293364951|ref|ZP_06611668.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus oralis ATCC 35037] gi|291316401|gb|EFE56837.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus oralis ATCC 35037] Length = 273 Score = 208 bits (531), Expect = 7e-52, Method: Composition-based stats. Identities = 60/266 (22%), Positives = 108/266 (40%), Gaps = 16/266 (6%) Query: 1 MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWK 57 M K FF+S L + + + A + DI+KRG L G+ + F G + Sbjct: 10 MKKKFFLSALLISLFSLAAAKPAQADTSVADIQKRGELVVGVKQDVPNFGYKDPKTGTYS 69 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G + D + ++ + KI+Y+P+ A+ R L ++Q+D+ T R+ Sbjct: 70 GIETDLAKMIADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKLYNF- 125 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y D GF+++K I S+ L+G +I V G+ T+ + + K + + + Sbjct: 126 -TSPYYTDSSGFLVNKSANIKSIEDLNGKTIGVAQGSITQRLITELGKKKGLTFKFVELG 184 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E+ + AHR DA++ D S L +L D S + +TE Sbjct: 185 SYPELITSLHAHRIDAFSVDRSILSGYISK-----RTELLDDSFKPSDYGIVTKKSNTEL 239 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQ 263 + + + G QK ++ Sbjct: 240 NDYLDSLVTKWT---KDGSLQKLYDR 262 >gi|307703202|ref|ZP_07640148.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus oralis ATCC 35037] gi|307623277|gb|EFO02268.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus oralis ATCC 35037] Length = 264 Score = 208 bits (531), Expect = 7e-52, Method: Composition-based stats. Identities = 60/266 (22%), Positives = 108/266 (40%), Gaps = 16/266 (6%) Query: 1 MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWK 57 M K FF+S L + + + A + DI+KRG L G+ + F G + Sbjct: 1 MKKKFFLSALLISLFSLAAAKPAQADTSVADIQKRGELVVGVKQDVPNFGYKDPKTGTYS 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G + D + ++ + KI+Y+P+ A+ R L ++Q+D+ T R+ Sbjct: 61 GIETDLAKMIADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKLYNF- 116 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y D GF+++K I S+ L+G +I V G+ T+ + + K + + + Sbjct: 117 -TSPYYTDSSGFLVNKSANIKSIEDLNGKTIGVAQGSITQRLITELGKKKGLTFKFVELG 175 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E+ + AHR DA++ D S L +L D S + +TE Sbjct: 176 SYPELITSLHAHRIDAFSVDRSILSGYISK-----RTELLDDSFKPSDYGIVTKKSNTEL 230 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQ 263 + + + G QK ++ Sbjct: 231 NDYLDSLVTKWT---KDGSLQKLYDR 253 >gi|330005974|ref|ZP_08305449.1| glutamate-aspartate periplasmic-binding protein [Klebsiella sp. MS 92-3] gi|328536028|gb|EGF62435.1| glutamate-aspartate periplasmic-binding protein [Klebsiella sp. MS 92-3] Length = 318 Score = 208 bits (531), Expect = 7e-52, Method: Composition-based stats. Identities = 50/251 (19%), Positives = 91/251 (36%), Gaps = 9/251 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQY 80 + L I K G + G V F+ G+ D+ A+ AI +K ++ Sbjct: 47 NTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVDAIKKKLNKPDLQVKL 106 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +P+ ++ R LQ+ D +T L R+ + G ++ K I Sbjct: 107 IPVTSQNRIPLLQNGTFDFECGSTTNNLERQKQAAF--SDTIFVVGTRLLVKKGGPIKDF 164 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 S L ++ V +GTT+E+ L M I + + + R A+ D + Sbjct: 165 SDLKDKAVVVTSGTTSEILLHKLNDEKKMNMRIISAKDHGDSFRTLESGRAVAFMMDDAL 224 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L + +P I+ SK + + D + +V T T+ E +K Sbjct: 225 LAGERAKAKKPDNWEIVGTPQSKEAYGCMLRKDDPTFKALVDETVAQAQTSGE---AEKW 281 Query: 261 INQVSKDTTNP 271 ++ K+ P Sbjct: 282 FDKWFKNPIPP 292 >gi|325121847|gb|ADY81370.1| putative ABC transporter, periplasmic binding protein, amino acid [Acinetobacter calcoaceticus PHEA-2] Length = 288 Score = 208 bits (531), Expect = 7e-52, Method: Composition-based stats. Identities = 59/251 (23%), Positives = 111/251 (44%), Gaps = 15/251 (5%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S + IKK G ++ G+ + F + A G +GFDV+ + ++ + D +K++++ Sbjct: 43 SSIEQIKKNGVVRIGVFSDKPPFGYLDAQGKNQGFDVEIAKHVAKDLLGDENKVEFVLTE 102 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 A R L++ ++DI+ N T R+ + A G + K I+ V+QL Sbjct: 103 AANRVEYLKANKVDIIFANFTVTSERKEVVDFA--KPYLKVALGVVSPKSHPITDVAQLK 160 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 ++ V GTT + +F + + +E+ E A + R A D L L Sbjct: 161 DKTLLVNKGTTADS----FFTKTHPEIKLQKYEQNTETFDALKDGRGAALAHDN--LLVL 214 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI----TQKN 260 + P+ V + ++ + +APA+ +GD E + W + + + G+ +K Sbjct: 215 AWAKENPNYTVGITNLGEQDLIAPAVKKGDKELLD---WLNPELEKLAKEGVIHQAYEKT 271 Query: 261 INQVSKDTTNP 271 + V DT NP Sbjct: 272 LKPVYGDTINP 282 >gi|330815541|ref|YP_004359246.1| Glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia gladioli BSR3] gi|327367934|gb|AEA59290.1| Glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia gladioli BSR3] Length = 297 Score = 208 bits (531), Expect = 8e-52, Method: Composition-based stats. Identities = 49/262 (18%), Positives = 90/262 (34%), Gaps = 9/262 (3%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 + + L IK G + G + F+ N G+ DF + A+ Sbjct: 15 TFAGGAMAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQKVIGYARDFQMKVVDAVKK 74 Query: 74 DPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 + +++ +P+ ++ R +Q+ +DI +T L R+ + G Sbjct: 75 KLNLPNLQVKDIPVTSQNRIPLVQNGTVDIECGSTTNNLERQKQAAF--STTYFVIGTRL 132 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 + K GI + L G ++ AGTT+E L M I + E Sbjct: 133 MTSKDSGIKDFADLKGKTVVTTAGTTSERLLRAMNNDKQMGMSIISAKDHGESFQTLETG 192 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 R A+ D + L + +P VI+ S+ + + D + +V A+ Sbjct: 193 RAVAFMMDDALLAGERAKAKKPDNWVIVGTPQSEEAYGCMMRKDDPAFKAVVDG---AIT 249 Query: 250 TAEELGITQKNINQVSKDTTNP 271 E+ G K + P Sbjct: 250 ELEKSGEAAKLYTTWFEKPIPP 271 >gi|206579054|ref|YP_002239696.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Klebsiella pneumoniae 342] gi|288936538|ref|YP_003440597.1| extracellular solute-binding protein family 3 [Klebsiella variicola At-22] gi|206568112|gb|ACI09888.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Klebsiella pneumoniae 342] gi|288891247|gb|ADC59565.1| extracellular solute-binding protein family 3 [Klebsiella variicola At-22] Length = 303 Score = 208 bits (531), Expect = 8e-52, Method: Composition-based stats. Identities = 50/251 (19%), Positives = 89/251 (35%), Gaps = 9/251 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQY 80 S L I K G + G V F+ G+ D+ A+ AI +K ++ Sbjct: 32 STLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVDAIKKKLNKPDLQVKL 91 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +P+ ++ R LQ+ D +T L R+ + G ++ K I Sbjct: 92 IPVTSQNRIPLLQNGTFDFECGSTTNNLERQKQAAF--SDTIFVVGTRLLVKKGGPIKDF 149 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L ++ V +GTT+E+ L M I + + + R A+ D + Sbjct: 150 PDLKDKAVVVTSGTTSEILLHKLNDEKKMNMRIISAKDHGDSFRTLESGRAVAFMMDDAL 209 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L + +P I+ SK + + D + +V T T+ E K Sbjct: 210 LAGERAKAKKPDNWEIVGTAQSKEAYGCMLRKDDPSFKALVDETVAQAQTSGE---AAKW 266 Query: 261 INQVSKDTTNP 271 ++ K+ P Sbjct: 267 FDKWFKNPIPP 277 >gi|238893716|ref|YP_002918450.1| glutamate and aspartate transporter subunit [Klebsiella pneumoniae NTUH-K2044] gi|238546032|dbj|BAH62383.1| glutamate/aspartate periplasmic binding protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 328 Score = 208 bits (531), Expect = 8e-52, Method: Composition-based stats. Identities = 49/251 (19%), Positives = 90/251 (35%), Gaps = 9/251 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQY 80 + L I K G + G V F+ G+ D+ A+ AI +K ++ Sbjct: 57 NTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVDAIKKKLNKPDLQVKL 116 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +P+ ++ R LQ+ D +T L R+ + G ++ K I Sbjct: 117 IPVTSQNRIPLLQNGTFDFECGSTTNNLERQKQAAF--SDTIFVVGTRLLVKKGGPIKDF 174 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L ++ V +GTT+E+ L M I + + + R A+ D + Sbjct: 175 PDLKDKAVVVTSGTTSEILLHKLNDEKKMNMRIISAKDHGDSFRTLESGRAVAFMMDDAL 234 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L + +P I+ SK + + D + +V T T+ E +K Sbjct: 235 LAGERAKAKKPDNWEIVGTPQSKEAYGCMLRKDDPTFKALVDETVAQAQTSGE---AEKW 291 Query: 261 INQVSKDTTNP 271 ++ K+ P Sbjct: 292 FDKWFKNPIPP 302 >gi|134093508|ref|YP_001098583.1| glutamate/aspartate periplasmic binding protein ABC transporter [Herminiimonas arsenicoxydans] gi|133737411|emb|CAL60454.1| Glutamate/aspartate periplasmic binding protein precursor [Herminiimonas arsenicoxydans] Length = 300 Score = 208 bits (531), Expect = 8e-52, Method: Composition-based stats. Identities = 52/264 (19%), Positives = 106/264 (40%), Gaps = 7/264 (2%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K + + ++ + L IK+ G + G + F+ + G+ +D Sbjct: 8 KTLIGAAMMSTLMTAAQAQELSGTLKKIKETGEITIGYRESSIPFSFLDDKQQPIGYAMD 67 Query: 63 FCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 C + + D K++ P+ + R L + ID+ +T ++ R+ + Sbjct: 68 LCMKIVGTVKADLKLPALKVKLQPVTSSNRIPLLNNGTIDLECGSTTNSIARQEQVAF-- 125 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 P + + K I++++QL G ++ +GTT+ L Y KA N + I + Sbjct: 126 GPTYFVINVTAAVKKSSNINTIAQLDGKTVSTTSGTTSVPLLKAYKKAGNAQVKEIYGKD 185 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E R A+ D L RP ++ ILP+ + + P + + +GD ++ Sbjct: 186 HAEAFLLMADDRAAAFVMDDILLAGQIANAKRPGDYKILPESLRQEPYSMMLRKGDPQFK 245 Query: 239 NIVSWTHYAMVTAEEL-GITQKNI 261 +V + A++ + E+ I K Sbjct: 246 ALVDKSITAVMQSGEIDKIYAKWF 269 >gi|303249936|ref|ZP_07336138.1| putative ABC transporter, periplasmic binding protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|302650999|gb|EFL81153.1| putative ABC transporter, periplasmic binding protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 278 Score = 208 bits (530), Expect = 9e-52, Method: Composition-based stats. Identities = 60/278 (21%), Positives = 119/278 (42%), Gaps = 17/278 (6%) Query: 3 KDFFVSILCLIILFF------TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 K + + L ST + IK++G ++ G+ F V ANG Sbjct: 8 KTLLATAITAFALTACDNANNAQSSTAKDSVAQIKEKGVIRIGVFGDKPPFGYVDANGKN 67 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +GFDV+ + +++ + P K++++ A R L+S ++D++ N T R + + Sbjct: 68 QGFDVEIAKEIANDLLGSPDKVEFVLTEAANRVEYLKSNKVDLILANFTKTPER--AEVV 125 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F G + K IS + QL G ++ V GTT + YF ++ + + + F Sbjct: 126 DFATPYMNVALGVVSPKGALISDLKQLEGKTLLVNKGTTADA----YFTKNHPEINLLKF 181 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 ++ E A + R A D + ++A + P+ V + + +APA+ +G+ Sbjct: 182 DQNTETFDALKDGRGVALAHDNALVWAWAK--ENPTFDVAIGSVGPAEQIAPAVQKGNQA 239 Query: 237 WYNIVSWTHYAMVTAEELG-ITQKNINQVSKDTTNPDV 273 ++++ T +L +K + V D P++ Sbjct: 240 LLDVINKEIAEFKTNGKLKAAYEKTLVPVYGD--KPEL 275 >gi|224372632|ref|YP_002607004.1| extracellular solute-binding protein, family 3 [Nautilia profundicola AmH] gi|223588682|gb|ACM92418.1| extracellular solute-binding protein, family 3 [Nautilia profundicola AmH] Length = 260 Score = 208 bits (530), Expect = 9e-52, Method: Composition-based stats. Identities = 58/275 (21%), Positives = 111/275 (40%), Gaps = 20/275 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + ++ +F T + +A +L D++ RG LK G+ F V + G GFD Sbjct: 1 MKKLF--AFFVILGMFLT--TASADLLKDVQSRGVLKAGVKYDFPPFGYVNSKGQVVGFD 56 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + ++ + P + + +K R +QS IDI + + + R++ + Sbjct: 57 IDLIKYIAKKLGVKPV---FTQVTSKTRIPMVQSGTIDIAAASMTHKVKRDLPIDFTIS- 112 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 YFDGQ + K S +G + V G T+ D FK + F+ Sbjct: 113 -YYFDGQSILARKDCKAKSYKDFAGKRVGVIQGATS----GDNFKRVCPGVKLVYFQEYP 167 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A + + DA + D + + + ++ + P + + ++ + + Sbjct: 168 QAVMALKRGKIDAVSTDYTWCATQAKNSH--GQFKVVGKPFTFEPYGMGVRENESNFRDA 225 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTN--PDV 273 V+ +A+ A G QK + N P+V Sbjct: 226 VN---FAIQDAVRDGTYQKLYKKWFGTEPNRLPEV 257 >gi|16128638|ref|NP_415188.1| glutamate and aspartate transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|89107524|ref|AP_001304.1| glutamate and aspartate transporter subunit [Escherichia coli str. K-12 substr. W3110] gi|170080234|ref|YP_001729554.1| glutamate/aspartate ABC transporter periplasmic-binding protein [Escherichia coli str. K-12 substr. DH10B] gi|170080335|ref|YP_001729655.1| glutamate/aspartate ABC transporter periplasmic-binding protein [Escherichia coli str. K-12 substr. DH10B] gi|238899932|ref|YP_002925728.1| glutamate and aspartate transporter subunit [Escherichia coli BW2952] gi|256023733|ref|ZP_05437598.1| glutamate and aspartate transporter subunit [Escherichia sp. 4_1_40B] gi|301028861|ref|ZP_07192037.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 196-1] gi|307137272|ref|ZP_07496628.1| glutamate and aspartate transporter subunit [Escherichia coli H736] gi|2507365|sp|P37902|GLTI_ECOLI RecName: Full=Glutamate/aspartate periplasmic-binding protein; Flags: Precursor gi|1778573|gb|AAB40856.1| hypothetical protein [Escherichia coli] gi|1786876|gb|AAC73756.1| glutamate and aspartate transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|85674732|dbj|BAA35307.2| glutamate and aspartate transporter subunit [Escherichia coli str. K12 substr. W3110] gi|169888069|gb|ACB01776.1| glutamate and aspartate transporter subunit, periplasmic-binding component of ABC superfamily [Escherichia coli str. K-12 substr. DH10B] gi|169888170|gb|ACB01877.1| glutamate and aspartate transporter subunit, periplasmic-binding component of ABC superfamily [Escherichia coli str. K-12 substr. DH10B] gi|238861328|gb|ACR63326.1| glutamate and aspartate transporter subunit [Escherichia coli BW2952] gi|260450178|gb|ACX40600.1| extracellular solute-binding protein family 3 [Escherichia coli DH1] gi|299878166|gb|EFI86377.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 196-1] gi|315135321|dbj|BAJ42480.1| glutamate and aspartate transporter subunit [Escherichia coli DH1] gi|315616423|gb|EFU97040.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli 3431] gi|323938417|gb|EGB34671.1| bacterial extracellular solute-binding protein 3 [Escherichia coli E1520] gi|323943070|gb|EGB39229.1| extracellular solute-binding protein 3 [Escherichia coli E482] gi|323972110|gb|EGB67324.1| extracellular solute-binding protein 3 [Escherichia coli TA007] Length = 302 Score = 208 bits (530), Expect = 9e-52, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 93/252 (36%), Gaps = 9/252 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQ 79 S L I K G + G V F+ G+ D+ A+ A+ +K ++ Sbjct: 30 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ + G + K I Sbjct: 90 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAAF--SDTIFVVGTRLLTKKGGDIKD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 148 FANLKDKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 207 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L + +P I+ S+ + + D ++ ++ T + T+ E +K Sbjct: 208 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGE---AEK 264 Query: 260 NINQVSKDTTNP 271 ++ K+ P Sbjct: 265 WFDKWFKNPIPP 276 >gi|24379909|ref|NP_721864.1| putative ABC transporter, glutamine binding protein [Streptococcus mutans UA159] gi|24377888|gb|AAN59170.1|AE014984_5 putative ABC transporter, glutamine binding protein [Streptococcus mutans UA159] Length = 270 Score = 208 bits (530), Expect = 9e-52, Method: Composition-based stats. Identities = 60/279 (21%), Positives = 122/279 (43%), Gaps = 22/279 (7%) Query: 3 KDFFVSILCLIILFFT--------SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-N 53 K F +S+ LI++ + + + + + IK+ G LK G+ + F A Sbjct: 4 KKFLISLAALIMIATSLSGLSKVNADNVTSPQVKKIKRAGVLKVGVKQDVPNFGYYNAET 63 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G ++G ++D R ++ +I K++ +P+ + R + + Q+D++ T R+ S Sbjct: 64 GKYEGMEIDIARKIAKSIG---VKLELVPVTTQTREPLMDNGQVDLVIATYTITPERQAS 120 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + Y+D GF++ + IS +S L G +I V G TT++ L Y K H++K++ Sbjct: 121 --YSISKPYYYDQIGFLVRQSSKISKISDLDGLTIGVSQGATTKVNLEAYAKKHHLKFNY 178 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + E+ + + R DA++ D S L + +L + A + Sbjct: 179 VQLGSFPELAISLYSKRIDAFSVDKSILTGYVSKQSK-----LLKSGFNTQEYGIATKKS 233 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272 +T V++ + L + N+ + ++ PD Sbjct: 234 NTGLTKYVNYLLKKWTADKSL---ESIYNKHNLESAKPD 269 >gi|120608912|ref|YP_968590.1| extracellular solute-binding protein [Acidovorax citrulli AAC00-1] gi|120587376|gb|ABM30816.1| amino acid ABC transporter substrate-binding protein, PAAT family [Acidovorax citrulli AAC00-1] Length = 305 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 58/251 (23%), Positives = 107/251 (42%), Gaps = 8/251 (3%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE-VKANGDWKGFDVDFCRALS 68 CL+ + + L IK+ G + G + F+ K GD GF D C + Sbjct: 18 ACLLAHGAAASAQEIDTLARIKQTGVIHIGNRDSSIPFSYSPKGGGDPVGFSNDICLKIV 77 Query: 69 SAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 A+ ++QY LN+ R +Q+ +D+ T +++R +AF P + Sbjct: 78 EAVKAKLGLPALRVQYTLLNSLNRIPLMQNGTVDLDCATTTNSVVR--QQMVAFAPSHFV 135 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 G + K GI+S+S L+G ++ AG+T+ L Y +A + + + + Sbjct: 136 AGITVAVKKNSGINSLSDLAGKTVATVAGSTSVQLLRTYKRAEALDVRELSGKDTADAFL 195 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDTEWYNIVSW 243 R DAY D L L ++ P E+ +L D ++ + P + D ++ +V Sbjct: 196 LLANGRADAYVLDDVQLAGLIASSPNPGEYRMLRDVVLRQEPYGIMFRKNDPQFEALVDE 255 Query: 244 THYAMVTAEEL 254 T ++ + E+ Sbjct: 256 TVTQLMKSGEM 266 >gi|159794821|pdb|2IA4|A Chain A, Crystal Structure Of Novel Amino Acid Binding Protein From Shigella Flexneri Length = 279 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 46/256 (17%), Positives = 92/256 (35%), Gaps = 9/256 (3%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK-- 77 S L I K G + G V F+ G+ D+ A+ A+ +K Sbjct: 1 APAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPD 60 Query: 78 --IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 ++ +P+ ++ R LQ+ D +T + R+ + G + K Sbjct: 61 LQVKLIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAAF--SDTIFVVGTRLLTKKGG 118 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I + L G ++ V +GTT+E+ L + I + + + R A+ Sbjct: 119 DIKDFADLKGKAVVVTSGTTSEVLLNKLNEEQKXNXRIISAKDHGDSFRTLESGRAVAFX 178 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D + L + +P I+ S+ + + D ++ + T + T+ E Sbjct: 179 XDDALLAGERAKAKKPDNWDIVGKPQSQEAYGCXLRKDDPQFKKLXDDTIAQVQTSGE-- 236 Query: 256 ITQKNINQVSKDTTNP 271 +K ++ K+ P Sbjct: 237 -AEKWFDKWFKNPIPP 251 >gi|107104181|ref|ZP_01368099.1| hypothetical protein PaerPA_01005254 [Pseudomonas aeruginosa PACS2] gi|254244037|ref|ZP_04937359.1| hypothetical protein PA2G_04870 [Pseudomonas aeruginosa 2192] gi|126197415|gb|EAZ61478.1| hypothetical protein PA2G_04870 [Pseudomonas aeruginosa 2192] Length = 299 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 51/255 (20%), Positives = 107/255 (41%), Gaps = 8/255 (3%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAI-- 71 + + L + G + G V F+ + +G G+ V+ + + Sbjct: 17 IGAAQAEELSGTLKKVADNGTITLGYRDASVPFSYLGDNSGQPMGYSVELADKVVERLKS 76 Query: 72 -FDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 P K++Y + ++ R +Q+ +D+ +T T R+ + ++ I Y GQ Sbjct: 77 TLGKPELKVKYNLVTSQTRIPLVQNGTVDLECGSTGVTAERQKQVAFSYGFI-YVKGQ-L 134 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 + K GI+ L G ++ AGTT E L +Y H + + + + E ++ Sbjct: 135 LTRKDSGIAHFDDLKGKNVVTTAGTTNERYLKNYNAEHKLGMNVVSAKDHGEAFQMLQSG 194 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 R A+ D + LY + +P + V++ + S+ + + + D ++ +V+ T + Sbjct: 195 RAVAFYMDDALLYGERAKARQPHDWVVVGEPQSREIYSCMVRKDDPQFLALVNETLAGLY 254 Query: 250 TAEEL-GITQKNINQ 263 + E+ GI Q+ Q Sbjct: 255 RSGEIQGIYQRWFQQ 269 >gi|264676713|ref|YP_003276619.1| amino-acid ABC transporter binding protein ybeJ precursor [Comamonas testosteroni CNB-2] gi|262207225|gb|ACY31323.1| amino-acid ABC transporter binding protein ybeJ precursor [Comamonas testosteroni CNB-2] Length = 303 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 59/299 (19%), Positives = 116/299 (38%), Gaps = 12/299 (4%) Query: 1 MYKDFFVSILCLIILFFTSF----STNASILGDIKKRGFLKCGINTGLVGFAE-VKANGD 55 M + ++ L+ S + + S L ++K G + G+ A + AN Sbjct: 4 MTANITLACTALVAAMAASGVQAQTASGSTLEKLQKTGKVVIGVRESSAPMAYAIGANHR 63 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + G+ V+ C + + I +KI+Y+ + A+ +Q+ +D+ T L R+ + Sbjct: 64 FTGYHVELCEKVLAQI-APSAKIEYMAITAQNTMPLVQNGTVDLGCGPTTNNLSRQKQVS 122 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 A TY + ++S QL G ++ AGTT L Y +N+K + Sbjct: 123 FAV--TTYVSQVRMAVRADSPVTSFKQLDGKTVAASAGTTAVQLLRKYSHDNNVKLPTQL 180 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E + R DA+ D + L + + P + I+ + + P+A + + D Sbjct: 181 GKDHFESFLMLESGRADAFVLDDNLLAGVIANSKDPRGYKIVGEALGSEPIALLMRKDDP 240 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKD 294 + V M+ + E+ K ++ P L + S + + L D Sbjct: 241 GFKKAVDDALVRMMKSGEV---AKIYDKWFMQPIPPKEMP-LNLPMSETLKQLLQAPND 295 >gi|171315678|ref|ZP_02904912.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MEX-5] gi|171099210|gb|EDT43983.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MEX-5] Length = 298 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 54/277 (19%), Positives = 96/277 (34%), Gaps = 11/277 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + F + L ++ A L IK G + GI V F+ G Sbjct: 1 MDRRFRWLAVALTCALASTAHAQALTGTLKKIKDTGIVSLGIRESSVPFSYSDNQQKNIG 60 Query: 59 FDVDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + D + A+ + ++ +P+ ++ R LQ+ ID +T TL R+ Sbjct: 61 YSRDIAARIIDALKAELKAPNLTVKEIPITSQNRIPLLQNGTIDFECGSTTNTLERQKQA 120 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + Y G F K G+ + L+G ++ AGT+ E L + M I Sbjct: 121 AFSNSIFLY--GIRFSTRKDSGVKDFTDLAGKTVATTAGTSDERLLRKLNEEKGMNMTII 178 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + E R A+ D LY + P + + + A + + D Sbjct: 179 SAKDHAEAFMNVTTGRAVAFVMDEPLLYGEIAKDRNPGAYTVAGTPLVHENYACMMRKDD 238 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + ++V + T+ G +K +Q P Sbjct: 239 PAFKHVVDGVIAKLQTS---GAAEKLYDQWFMQPIPP 272 >gi|309700894|emb|CBJ00191.1| glutamate/aspartate ABC transporter, substrate-binding protein [Escherichia coli ETEC H10407] Length = 302 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 49/278 (17%), Positives = 100/278 (35%), Gaps = 14/278 (5%) Query: 3 KDFFVSILCLIILF-----FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 + +IL L + + S L I K G + G V F+ Sbjct: 4 RKPATAILTLALSAGLAQADDAAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVV 63 Query: 58 GFDVDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ D+ A+ A+ +K ++ +P+ ++ R LQ+ D +T + R+ Sbjct: 64 GYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQ 123 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + G + K I + L ++ V +GTT+E+ L + M Sbjct: 124 AAF--SDTIFVVGTRLLTKKGGDIKDFANLKDKAVVVTSGTTSEVLLNKLNEEQKMNMRI 181 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + + + R A+ D + L + +P I+ S+ + + Sbjct: 182 ISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKD 241 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 D ++ ++ T + T+ E +K ++ K+ P Sbjct: 242 DPQFKKLMDDTIAQVQTSGE---AEKWFDKWFKNPIPP 276 >gi|218894181|ref|YP_002443050.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa LESB58] gi|254238211|ref|ZP_04931534.1| hypothetical protein PACG_04337 [Pseudomonas aeruginosa C3719] gi|126170142|gb|EAZ55653.1| hypothetical protein PACG_04337 [Pseudomonas aeruginosa C3719] gi|218774409|emb|CAW30226.1| probable binding protein component of ABC transporter [Pseudomonas aeruginosa LESB58] Length = 299 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 51/255 (20%), Positives = 107/255 (41%), Gaps = 8/255 (3%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAI-- 71 + + L + G + G V F+ + +G G+ V+ + + Sbjct: 17 IGAAQAEELSGTLKKVADNGTITLGYRDASVPFSYLGDNSGQPMGYSVELADKVVERLKS 76 Query: 72 -FDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 P K++Y + ++ R +Q+ +D+ +T T R+ + ++ I Y GQ Sbjct: 77 TLGKPELKVKYNLVTSQTRIPLVQNGTVDLECGSTGVTAERQKQVAFSYGFI-YVKGQ-L 134 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 + K GI+ L G ++ AGTT E L +Y H + + + + E ++ Sbjct: 135 LTRKDSGIAHFDDLKGKNVVTTAGTTNERYLKNYNAEHKLGMNVVSAKDHGEAFQMLQSG 194 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 R A+ D + LY + +P + V++ + S+ + + + D ++ +V+ T + Sbjct: 195 RAVAFYMDDALLYGERAKARQPHDWVVVGEPQSREIYSCMVRKDDPQFLALVNETLAGLY 254 Query: 250 TAEEL-GITQKNINQ 263 + E+ GI Q+ Q Sbjct: 255 RSGEIQGIYQRWFQQ 269 >gi|257094459|ref|YP_003168100.1| family 3 extracellular solute-binding protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046983|gb|ACV36171.1| extracellular solute-binding protein family 3 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 284 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 63/270 (23%), Positives = 115/270 (42%), Gaps = 9/270 (3%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 + L F + A L IK + G + F+ + G+ VD C ++ Sbjct: 8 LCVATALSFPLSALAAGTLDKIKASRTISLGYREASIPFSYTGDDNQPWGYSVDLCTRVA 67 Query: 69 SAI----FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 +AI + ++Q++P+ + R L+S ID+ +T +L R + + +T+ Sbjct: 68 AAIVKQLGLEELQLQWVPVTPETRVAKLKSGAIDLECGSTTSSLARMQEVDFSL--LTFV 125 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 DG ++ K GI + L+G I V AGTT+E T+A+ H + + ++ A Sbjct: 126 DGGSYLTRKASGIKRLDDLAGKRIAVAAGTTSERTIAEALTQHQVGAQLVKVSDHQQGLA 185 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 A + DAY D S L L L + S+ V+ P+ S P A + + D ++ V+ Sbjct: 186 AMVQGKVDAYASDRSLLIGLALDSGNQSDWVLGPETFSYEPYALMMRRNDADFRLAVNRE 245 Query: 245 HYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 + + E+ ++ P V+ Sbjct: 246 LARLSRSREI---YTIYDRWFGYLAKPGVK 272 >gi|152969252|ref|YP_001334361.1| glutamate and aspartate transporter subunit [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150954101|gb|ABR76131.1| glutamate/aspartate periplasmic binding protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 318 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 49/251 (19%), Positives = 90/251 (35%), Gaps = 9/251 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQY 80 + L I K G + G V F+ G+ D+ A+ AI +K ++ Sbjct: 47 NTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVDAIKKKLNKPDLQVKL 106 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +P+ ++ R LQ+ D +T L R+ + G ++ K I Sbjct: 107 IPVTSQNRIPLLQNGTFDFECGSTTNNLERQKQAAF--SDTIFVVGTRLLVKKGGPIKDF 164 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L ++ V +GTT+E+ L M I + + + R A+ D + Sbjct: 165 PDLKDKAVVVTSGTTSEILLHKLNDEKKMNMRIISAKDHGDSFRTLESGRAVAFMMDDAL 224 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L + +P I+ SK + + D + +V T T+ E +K Sbjct: 225 LAGERAKAKKPDNWEIVGTPQSKEAYGCMLRKDDPTFKALVDETVAQAQTSGE---AEKW 281 Query: 261 INQVSKDTTNP 271 ++ K+ P Sbjct: 282 FDKWFKNPIPP 292 >gi|322508165|gb|ADX03619.1| amino acid ABC transporter periplasmic protein [Acinetobacter baumannii 1656-2] Length = 297 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 56/278 (20%), Positives = 99/278 (35%), Gaps = 13/278 (4%) Query: 1 MYKD---FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M + VS + L + TS A L IK G + G + V A G Sbjct: 1 MKRSATSLIVSTVMLCTVGATSQIQAADTLAKIKSTGKIVIGHRESSDPISYVVA-GKPV 59 Query: 58 GFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ VD C ++ I + K++Y + + R L + ID+ T + R+ Sbjct: 60 GYAVDICNQFANDIKKELKMPGLKVEYKAVTSSTRIPELLAGNIDMECGTTTNSKQRQQQ 119 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 +G + Y + GI S++ L+G ++ GTT++ + K + Sbjct: 120 VGFSTN--YYATEVRMAVKANSGIKSLADLNGKAVVTTQGTTSDKYIKMNEKGQAINVQN 177 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + + A + R A+ D + L L + P I+ ++S P I + Sbjct: 178 IYGKDHADSFAMMASGRAAAFVMDDNILAGLIAKSSTPKAFAIVGPVLSSEPYGIMIAKD 237 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 D ++ I T + G + P Sbjct: 238 DPKFKAIADRTVN---NLWKTGQMDALYKKWFLSPIPP 272 >gi|224826757|ref|ZP_03699857.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum 2002] gi|224600977|gb|EEG07160.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum 2002] Length = 301 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 51/264 (19%), Positives = 95/264 (35%), Gaps = 7/264 (2%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + + + ++ + L IK G + G + F+ + N G+ +D Sbjct: 6 RLICTATVGALLAAPAMSAELTGTLKKIKDSGTIVIGHRDASIPFSYLDNNQQPIGYSMD 65 Query: 63 FCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 + A+ D K+QY + ++ R +Q+ +DI +T L R+ + + Sbjct: 66 IAHKVVEAVKKDLKMPGLKVQYNLVTSQTRIPLVQNGTVDIECGSTTNNLERQKQVDFSV 125 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + G + K GI L G ++ AGTT+E + M + I + Sbjct: 126 GI--FEIGTRLLTKKTSGIKDFPDLKGKNVVTTAGTTSERLIKAMNAEKQMGMNIISAKD 183 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E + R A+ D LY + P+E V+ S + +GD + Sbjct: 184 HGESFLMAESGRAVAFMMDDVLLYGEMVKARNPAEWVVTGKPQSFEIYGCMMRKGDPAFK 243 Query: 239 NIVSWTHYAMVTAEELG-ITQKNI 261 +V A + E+ I K Sbjct: 244 KVVDDAIKATYKSGEINKIYAKWF 267 >gi|170702494|ref|ZP_02893375.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] gi|170132604|gb|EDT01051.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] Length = 306 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 46/273 (16%), Positives = 97/273 (35%), Gaps = 9/273 (3%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + V+ L + + L I++ G + G V F+ V A+G GF D Sbjct: 13 RSLLVAACALACGASLAAEPLSGTLEKIRQAGLISIGHRETSVPFSYVDASGKVIGFSQD 72 Query: 63 FCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 C + +A+ K ++++P+ ++ R +Q+ +D+ T R + Sbjct: 73 LCDRVIAAVKARTGKPDLQVRFIPVTSQNRIPLVQNGTVDLECGVTTNLAARHAQVAF-- 130 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + + GI L+G ++ GTT+E L + + I + Sbjct: 131 STTFFVATTRLLTRTSSGIRDFPDLAGKTVVTNQGTTSERLLRKMNEEKKLNMQIISAKD 190 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E + R AY D L ++ +P++ I+ S + + D ++ Sbjct: 191 YGEGRLTLESGRAAAYMMDDVLLAGVRQLAAKPADWAIVGTPQSSEAYGFMLRKDDPQFK 250 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 +V ++ + E+ ++ P Sbjct: 251 ALVDGVLVQLMKSGEIN---AQYDKWFMKPVPP 280 >gi|299066929|emb|CBJ38124.1| glutamate/aspartate transport protein (ABC superfamily, peri_bind) high affinity periplasmic solute-binding protein [Ralstonia solanacearum CMR15] Length = 304 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 51/278 (18%), Positives = 106/278 (38%), Gaps = 13/278 (4%) Query: 7 VSILCLIILFFTSFSTNAS---ILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVD 62 ++LC + F+ + AS +L I+ G ++ F+ A+ G+ VD Sbjct: 11 AALLCTSLSIFSPGTALASATPVLDRIRDTGTVRIAYRESASPFSYYDADSKKPIGYTVD 70 Query: 63 FCRALSSAI----FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 C + + K+QY+ + R A+Q + D+ T RE +AF Sbjct: 71 LCLRVVDKLRTELKRPDLKVQYVLITPSTRIPAIQEGKADLECSTTTNN--RERREQVAF 128 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y G ++ GI L ++ GTT+ L + ++ + Sbjct: 129 TIPHYIAGIRMLVKTASGIHKWDDLRDKTVVSTKGTTSVAELRKMNDSRVLRIKFEEVKE 188 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E A + + DA+ D LY+ + P ++ ++ D+++ P A + + D ++ Sbjct: 189 HAEAFAMVESGKADAFVMDDVQLYSFRANAKHPQDYTVVGDMMTVEPYAIMLSKSDPDFK 248 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRF 276 + V A++ + +K + + P+ + Sbjct: 249 HTVDRAMTAIILDYD---AEKLYKKWFQQPIPPNSAKL 283 >gi|171319564|ref|ZP_02908662.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MEX-5] gi|171095209|gb|EDT40203.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MEX-5] Length = 306 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 47/273 (17%), Positives = 97/273 (35%), Gaps = 9/273 (3%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + V+ L + + L I++ G + G V F+ V A+G GF D Sbjct: 13 RSLLVAACALACGASLAAEPLSGTLEKIRQAGLISIGHRETSVPFSYVDASGKVIGFSQD 72 Query: 63 FCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 C + +A+ K ++++P+ ++ R +Q+ +D+ T R + Sbjct: 73 LCDRVIAAVKARTGKPDLQVRFIPVTSQNRIPLVQNGTVDLECGVTTNLAARHAQVAF-- 130 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + + GI L+G ++ GTT+E L + M I + Sbjct: 131 STTFFVATTRLLTRTSSGIRDFHDLAGKTVVTNQGTTSERLLRKMNEEKKMNMQIISAKD 190 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E + R AY D L ++ +P++ I+ S + + D ++ Sbjct: 191 YGEGRLTLESGRAAAYMMDDVLLAGVRQLAAKPADWAIVGTPQSSEAYGFMLRKDDPQFK 250 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 +V ++ + E+ ++ P Sbjct: 251 ALVDGVLVQLMKSGEIN---ALYDKWFMKPVPP 280 >gi|293608418|ref|ZP_06690721.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292828991|gb|EFF87353.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 288 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 58/259 (22%), Positives = 113/259 (43%), Gaps = 15/259 (5%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 + + S + IKK G ++ G+ + F + G +GFDV+ + ++ + D + Sbjct: 35 TANTTQTVSSIEQIKKNGVVRIGVFSDKPPFGYLDVQGKNQGFDVEIAKHVAKDLLGDEN 94 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 K++++ A R L++ ++DI+ N T R+ + A G + K Sbjct: 95 KVEFVLTEAANRVEYLKANKVDIIFANFTVTPERKEVVDFA--KPYLKVALGVVSPKSHP 152 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 I++V+QL ++ V GTT + +F + + +E+ E A + R A Sbjct: 153 ITNVAQLKDKTLLVNKGTTADS----FFTKTHPEIKLQKYEQNTETFDALKDGRGAALAH 208 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 D L L + P+ V + ++ + +APA+ +GD E + W + + + G+ Sbjct: 209 DN--LLVLAWAKENPNYTVGITNLGEQDLIAPAVKKGDKELLD---WLNPELEKLAKEGV 263 Query: 257 ----TQKNINQVSKDTTNP 271 +K + V DT NP Sbjct: 264 IHQAYEKTLKPVYGDTINP 282 >gi|290510406|ref|ZP_06549776.1| glutamate and aspartate transporter subunit [Klebsiella sp. 1_1_55] gi|289777122|gb|EFD85120.1| glutamate and aspartate transporter subunit [Klebsiella sp. 1_1_55] Length = 318 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 50/251 (19%), Positives = 89/251 (35%), Gaps = 9/251 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQY 80 S L I K G + G V F+ G+ D+ A+ AI +K ++ Sbjct: 47 STLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVDAIKKKLNKPDLQVKL 106 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +P+ ++ R LQ+ D +T L R+ + G ++ K I Sbjct: 107 IPVTSQNRIPLLQNGTFDFECGSTTNNLERQKQAAF--SDTIFVVGTRLLVKKGGPIKDF 164 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L ++ V +GTT+E+ L M I + + + R A+ D + Sbjct: 165 PDLKDKAVVVTSGTTSEILLHKLNDEKKMNMRIISAKDHGDSFRTLESGRAVAFMMDDAL 224 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L + +P I+ SK + + D + +V T T+ E K Sbjct: 225 LAGERAKAKKPDNWEIVGTAQSKEAYGCMLRKDDPSFKALVDETVAQAQTSGE---AAKW 281 Query: 261 INQVSKDTTNP 271 ++ K+ P Sbjct: 282 FDKWFKNPIPP 292 >gi|218249147|ref|YP_002374518.1| family 3 extracellular solute-binding protein [Cyanothece sp. PCC 8801] gi|218169625|gb|ACK68362.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 8801] Length = 299 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 61/282 (21%), Positives = 114/282 (40%), Gaps = 17/282 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + IL L++ S+ A +L IK+ G + G + F + G W G+ Sbjct: 1 MGKKVTLFILTLVLATTGQASSWAGQVLEKIKQTGVINAGTRKDAIPFGYINEQGKWVGY 60 Query: 60 DVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +D + + P K+ + + ++RF ++ IDI +T +T R ++ Sbjct: 61 SLDVLEIIRKDVEKQLGKPIKLNLVEVTTQDRFNKIKDGSIDIECASTTFTWERNKTVDF 120 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + G ++ K +GI SV L+G + V TT E + A ++ Sbjct: 121 TVS--YFASGTKVLVKKDRGIGSVETLAGLKVGVIPKTTNEQAIKIQHPAAQ----LVMV 174 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDT 235 + +E A DA+ D L LK + P+ ++P+ + A I Q + Sbjct: 175 KDRKEGLQKLEAGTIDAFASDGILLEGLKKESSNPNNLEVVPEFPYAYESYACMIPQDQS 234 Query: 236 EWYNIVSWTHYAMVTA------EELGITQKNINQVSKDTTNP 271 +W N+V+++ + E + I +K + + T P Sbjct: 235 QWRNMVNYSLVKFMEGIVSDQPEPVAIYEKWFGEENGVTPYP 276 >gi|260550662|ref|ZP_05824871.1| glutamate/aspartate transporter [Acinetobacter sp. RUH2624] gi|260406373|gb|EEW99856.1| glutamate/aspartate transporter [Acinetobacter sp. RUH2624] Length = 297 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 55/278 (19%), Positives = 99/278 (35%), Gaps = 13/278 (4%) Query: 1 MYKD---FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M + VS + L + TS A L IK G + G + V G Sbjct: 1 MKRSATSLIVSTIMLCTVGATSQIQAADTLAKIKSTGKIVIGHRESSDPISYV-VGGKPV 59 Query: 58 GFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ VD C ++ I + K++Y + + R L + ID+ T + R+ Sbjct: 60 GYAVDICNQFANDIKKELKMPGLKVEYKAVTSSTRIPELLAGNIDMECGTTTNSKQRQQQ 119 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 +G + Y + GI S++ L+G ++ GTT++ + K ++ Sbjct: 120 VGFSTN--YYATEVRMAVKANSGIKSLADLNGKAVVTTQGTTSDKYIKMNEKGQSLNVQN 177 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + + A + R A+ D + L L + P I+ ++S P I + Sbjct: 178 IYGKDHSDSFAMMASGRAAAFVMDDNILAGLIAKSSTPKAFAIVGPVLSSEPYGIMIAKD 237 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 D ++ I T + G + P Sbjct: 238 DPKFKAIADRTVN---NLWKTGQMDALYKKWFLSPIPP 272 >gi|172063476|ref|YP_001811127.1| extracellular solute-binding protein [Burkholderia ambifaria MC40-6] gi|171995993|gb|ACB66911.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MC40-6] Length = 298 Score = 207 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 53/277 (19%), Positives = 94/277 (33%), Gaps = 11/277 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + F + L + L IK G + GI V F+ G Sbjct: 1 MDRRFRWLAVALTCALAGTAHAQGLTGTLKKIKDTGIVSLGIRESSVPFSYSDNQQKNIG 60 Query: 59 FDVDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + D + A+ + ++ +P+ ++ R LQ+ ID +T TL R+ Sbjct: 61 YSRDIAARIIDALKVELKAPNLTVKEIPITSQNRIPLLQNGTIDFECGSTTNTLERQKQA 120 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + Y G F K G+ + L+G ++ AGT+ E L + M I Sbjct: 121 AFSNSIFLY--GIRFSTRKDSGVKDFADLAGKTVATTAGTSDERLLRKLNEEKGMNMTII 178 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + E R A+ D LY + P + + + A + + D Sbjct: 179 SAKDHAEAFMNVTTGRAVAFVMDEPLLYGEIAKDRNPGAYTVAGTPLVHENYACMMRKDD 238 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + ++V + T+ G +K +Q P Sbjct: 239 PAFKHVVDGVIAKLQTS---GAAEKLYDQWFMQPIPP 272 >gi|296391932|ref|ZP_06881407.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa PAb1] gi|313110121|ref|ZP_07796023.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa 39016] gi|310882525|gb|EFQ41119.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa 39016] Length = 299 Score = 207 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 51/255 (20%), Positives = 107/255 (41%), Gaps = 8/255 (3%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAI-- 71 + + L + G + G V F+ + +G G+ V+ + + Sbjct: 17 IGAAQAEELSGTLKKVADNGTITLGYRDASVPFSYLGDNSGQPMGYSVELAGKVVERLKS 76 Query: 72 -FDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 P K++Y + ++ R +Q+ +D+ +T T R+ + ++ I Y GQ Sbjct: 77 TLGKPELKVKYNLVTSQTRIPLVQNGTVDLECGSTGVTAERQKQVAFSYGFI-YVKGQ-L 134 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 + K GI+ L G ++ AGTT E L +Y H + + + + E ++ Sbjct: 135 LTRKDSGIAHFDDLKGKNVVTTAGTTNERYLKNYNAEHKLGMNVVSAKDHGEAFQMLQSG 194 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 R A+ D + LY + +P + V++ + S+ + + + D ++ +V+ T + Sbjct: 195 RAVAFYMDDALLYGERAKARQPHDWVVVGEPQSREIYSCMVRKDDPQFLALVNETLAGLY 254 Query: 250 TAEEL-GITQKNINQ 263 + E+ GI Q+ Q Sbjct: 255 RSGEIQGIYQRWFQQ 269 >gi|268602559|ref|ZP_06136726.1| antigenic protein [Neisseria gonorrhoeae PID1] gi|268586690|gb|EEZ51366.1| antigenic protein [Neisseria gonorrhoeae PID1] Length = 274 Score = 207 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 60/256 (23%), Positives = 116/256 (45%), Gaps = 9/256 (3%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 +S S+ A+ + IK++G ++ G+ F V ANG +GFDV+ + L+ + P K Sbjct: 22 SSQSSGAATVAAIKEKGVIRIGVFGDKPPFGYVDANGKNQGFDVEIAKDLAKDLLGSPDK 81 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++++ A R ++S ++D++ N T R ++ A G + K K I Sbjct: 82 VEFVLTEAANRVEYVRSGKVDLILANFTQTPERAEAVDFAD--PYMKVALGVVSPKNKPI 139 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + ++QL ++ V GTT + +F + + + F++ E A + R A D Sbjct: 140 TDMAQLKDQTLLVNKGTTADA----FFTKSHPEVKLLKFDQNTETFDALKDGRGVALAHD 195 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-I 256 + L+A + P+ V + ++ +APA+ +G+ + N V+ AM L Sbjct: 196 NALLWAWAK--ENPNFEVAIGNLGPAEFIAPAVQKGNADLLNWVNGEIAAMKKDGRLKAA 253 Query: 257 TQKNINQVSKDTTNPD 272 +K V + P+ Sbjct: 254 YEKTFLPVYGEKVKPE 269 >gi|165977129|ref|YP_001652722.1| putative ABC transporter, periplasmic binding protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|165877230|gb|ABY70278.1| putative ABC transporter, periplasmic binding protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 278 Score = 207 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 60/278 (21%), Positives = 119/278 (42%), Gaps = 17/278 (6%) Query: 3 KDFFVSILCLIILFF------TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 K + + L ST + IK++G ++ G+ F V ANG Sbjct: 8 KTLLATAITAFALTACDNANNAQSSTAKDSVAQIKEKGVIRIGVFGDKPPFGYVDANGKS 67 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +GFDV+ + +++ + P K++++ A R L+S ++D++ N T R + + Sbjct: 68 QGFDVEIAKEIANDLLGSPDKVEFVLTEAANRVEYLKSNKVDLILANFTKTPER--AEVV 125 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F G + K IS + QL G ++ V GTT + YF ++ + + + F Sbjct: 126 DFATPYMNVALGVVSPKGALISDLKQLEGKTLLVNKGTTADA----YFTKNHPEINLLKF 181 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 ++ E A + R A D + ++A + P+ V + + +APA+ +G+ Sbjct: 182 DQNTETFDALKDGRGVALAHDNALVWAWAK--ENPTFDVAIGSVGPAEQIAPAVQKGNQA 239 Query: 237 WYNIVSWTHYAMVTAEELG-ITQKNINQVSKDTTNPDV 273 ++++ T +L +K + V D P++ Sbjct: 240 LLDVINKEIAEFKTNGKLKAAYEKTLVPVYGD--KPEL 275 >gi|157164816|ref|YP_001466613.1| surface antigen, CjaA [Campylobacter concisus 13826] gi|112800727|gb|EAT98071.1| surface antigen, CjaA [Campylobacter concisus 13826] Length = 285 Score = 207 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 58/287 (20%), Positives = 114/287 (39%), Gaps = 26/287 (9%) Query: 1 MYK-DFFVSILCLIILFF----------TSFSTNASILGDIKKRGFLKCGINTGLVGFAE 49 M K FF+ L + + S + IK+RG+++ G+ + F Sbjct: 1 MRKFKFFLLALVATVFLTGCGDDKSADKAAASNQTDAIAKIKERGYVRIGVFSDKPPFGY 60 Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 V +G +G+D+ F + ++ + D SK+++ + A R L + ++DI N T Sbjct: 61 VDKDGKNQGYDIYFAKRIAKDLLGDESKVKFELVEAAGRVEVLTADKVDITLANFTKTPE 120 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 R + A G + + I SV +L ++ V GTT + +F + Sbjct: 121 RAQVVDFAL--PYMKVSLGIVSPEGAVIKSVDELKDKTLIVNKGTTADA----FFTKNYP 174 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + +++ E AA R A D + L+A + P V + + +APA Sbjct: 175 DIKLLKYDQNTETFAALVDKRGAALAHDNALLFAWAK--ETPGFVVGVEALGDVDVIAPA 232 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN----QVSKDTTNPD 272 + +G+ W + ++ + K+ + + D+ NP+ Sbjct: 233 VKKGNKALLE---WINNEIIELGKENFFHKDYDATLKPIYGDSVNPE 276 >gi|170742663|ref|YP_001771318.1| extracellular solute-binding protein [Methylobacterium sp. 4-46] gi|168196937|gb|ACA18884.1| extracellular solute-binding protein family 3 [Methylobacterium sp. 4-46] Length = 301 Score = 207 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 48/274 (17%), Positives = 98/274 (35%), Gaps = 10/274 (3%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K + ++ S + L IK+ G + G V F+ + N G+ +D Sbjct: 4 KRLLILLVAGFAALPASAEELSGTLKKIKETGAITLGYRDSSVPFSYLDGNQKPVGYAMD 63 Query: 63 FCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 C + A+ +++ P+ + R + + +D+ +T + R+ + Sbjct: 64 ICYKVVDAVKAKLGLPNLEVKLNPVTSATRIPLIANGTVDLECGSTTNNVDRQKQVSF-- 121 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + F+ K +S L G ++ +GTT + +Y A+ + + + Sbjct: 122 TNTHFLTASRFVAKKSSNVSKFDDLKGKTVVSTSGTTNIRQINEYNAANKLGITILPAKD 181 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-SPLAPAIIQGDTEW 237 E R A+ D L +L ++ P ++I D ISK P + + D + Sbjct: 182 HAEAFLMVETGRAVAFVMDDVLLASLAASSKEPDAYLISTDAISKPEPYGIMLRKDDAPF 241 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 +V A + E T ++ P Sbjct: 242 KKVVDDATAAFYQSPEGPAT---YDKWFTKPIPP 272 >gi|160901104|ref|YP_001566686.1| extracellular solute-binding protein [Delftia acidovorans SPH-1] gi|160366688|gb|ABX38301.1| extracellular solute-binding protein family 3 [Delftia acidovorans SPH-1] Length = 299 Score = 207 bits (528), Expect = 2e-51, Method: Composition-based stats. Identities = 52/273 (19%), Positives = 104/273 (38%), Gaps = 11/273 (4%) Query: 4 DFFVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAE-VKANGDWKG 58 F ++ + + + + + +A L I+ G + G+ A + G Sbjct: 2 RFVLAHVAMACVVAATGAAHAQEAAGTLDKIQSTGKVVMGVRESSAPMAYAFGTTQKYVG 61 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 + V+ C + + I +KI+Y+ L ++ +Q+ +DI T L R+ + A Sbjct: 62 YHVELCEKVLAQI-VPKAKIEYMALTSQNTMPLVQNGTVDIGCGPTTNNLARQKQVAFAV 120 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 TY + GI+S QL G + AGTT L Y + + + + + Sbjct: 121 --TTYVSQVRMAVRADSGITSFKQLDGKPVAASAGTTAVQLLRKYGRDNGVNLPTSLGKD 178 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E + R DA+ D + L + + P+ I+ +++ P+A + D + Sbjct: 179 HFESFLMLESGRADAFVLDDNLLAGVIANSKNPAGFKIVGEVLGSEPIAILFRRDDPAFK 238 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 V M+ + E+ K ++ P Sbjct: 239 KAVDDVLVGMMASGEV---AKIYDKWFVQPIPP 268 >gi|254492739|ref|ZP_05105910.1| antigenic protein [Neisseria gonorrhoeae 1291] gi|268600327|ref|ZP_06134494.1| antigenic protein [Neisseria gonorrhoeae PID18] gi|268681108|ref|ZP_06147970.1| antigenic protein [Neisseria gonorrhoeae PID332] gi|268685214|ref|ZP_06152076.1| antigenic protein [Neisseria gonorrhoeae SK-92-679] gi|268685588|ref|ZP_06152450.1| antigenic protein [Neisseria gonorrhoeae SK-93-1035] gi|226511779|gb|EEH61124.1| antigenic protein [Neisseria gonorrhoeae 1291] gi|268584458|gb|EEZ49134.1| antigenic protein [Neisseria gonorrhoeae PID18] gi|268621392|gb|EEZ53792.1| antigenic protein [Neisseria gonorrhoeae PID332] gi|268625498|gb|EEZ57898.1| antigenic protein [Neisseria gonorrhoeae SK-92-679] gi|268625872|gb|EEZ58272.1| antigenic protein [Neisseria gonorrhoeae SK-93-1035] Length = 274 Score = 207 bits (528), Expect = 2e-51, Method: Composition-based stats. Identities = 60/256 (23%), Positives = 117/256 (45%), Gaps = 9/256 (3%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 +S S+ A+ + IK++G ++ G+ F V ANG +GFDV+ + L+ + P K Sbjct: 22 SSQSSGAATVAAIKEKGVIRIGVFGDKPPFGYVDANGKNQGFDVEIAKDLAKDLLGSPDK 81 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++++ A R ++S ++D++ N T R ++ A G + K K I Sbjct: 82 VEFVLTEAANRVEYVRSGKVDLILANFTQTPERAEAVDFAD--PYMKVALGVVSPKNKPI 139 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + ++QL ++ V GTT + +F + + + F++ E A + R A D Sbjct: 140 TDMAQLKDQTLLVNKGTTADA----FFTKSHPEVKLLKFDQNTETFDALKDGRGVALAHD 195 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-I 256 + L+A + P+ V + ++ +APA+ +G+ + N V+ AM L Sbjct: 196 NALLWAWAK--ENPNFEVAIGNLGPAEFIAPAVQKGNADLLNWVNGEIAAMKKDGRLKAA 253 Query: 257 TQKNINQVSKDTTNPD 272 +K + V + P+ Sbjct: 254 YEKTLLPVYGEKVKPE 269 >gi|329118220|ref|ZP_08246930.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Neisseria bacilliformis ATCC BAA-1200] gi|327465641|gb|EGF11916.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Neisseria bacilliformis ATCC BAA-1200] Length = 321 Score = 207 bits (528), Expect = 2e-51, Method: Composition-based stats. Identities = 55/244 (22%), Positives = 107/244 (43%), Gaps = 9/244 (3%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 IK++G ++ G+ F V + G +GFDV+ + ++ + P K++++ A R Sbjct: 81 IKEKGVIRIGVFGDKPPFGYVDSQGKNQGFDVEIAKEMAKDLLGSPDKVEFVLTEAANRV 140 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 +S ++D++ N T R ++ A G + KK ++ ++QL ++ Sbjct: 141 EYARSGKVDLVLANFTQTPERAEAVDFA--APYMKVALGVVSPDKKPVTDIAQLKDQTLL 198 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V GTT + +F ++ + + F++ E A + R A D + L+A + Sbjct: 199 VNKGTTADA----FFSKNHPEVKLLKFDQNTETFDALKDGRGVALAHDNALLWAWAK--E 252 Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQKNINQVSKDT 268 P V + +I +APA+ +GD + V+ AM L +K + V D Sbjct: 253 NPGYEVAIGNIGPAEVIAPAVKKGDKALLDWVNAEIAAMKKDGRLKAAYEKTLKPVYGDK 312 Query: 269 TNPD 272 P+ Sbjct: 313 VKPE 316 >gi|299770480|ref|YP_003732506.1| Glutamate/aspartate periplasmic-binding protein precursor [Acinetobacter sp. DR1] gi|298700568|gb|ADI91133.1| Glutamate/aspartate periplasmic-binding protein precursor [Acinetobacter sp. DR1] Length = 297 Score = 207 bits (528), Expect = 2e-51, Method: Composition-based stats. Identities = 54/278 (19%), Positives = 99/278 (35%), Gaps = 13/278 (4%) Query: 1 MYKD---FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M + +S L + TS A L IK G + G + V A G Sbjct: 1 MKRSATSLIISTFMLCTVGATSQIQAADTLAKIKSSGKIVIGHRESSDPISYVVA-GKPV 59 Query: 58 GFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ VD C ++ I + K++Y + + R L + ID+ T + R+ Sbjct: 60 GYAVDICNQFANDIKKELKMPGLKVEYKAVTSSTRIPELLAGNIDMECGTTTNSKQRQEQ 119 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 +G + Y + GI S++ L+G ++ GTT++ + K ++ Sbjct: 120 VGFSTN--YYATEVRMAVKANSGIKSLADLNGKAVVTTQGTTSDKYIKMNEKGQSINVQN 177 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + + A + R A+ D + L L + P I+ ++S P + + Sbjct: 178 IYGKDHADSFAMMASGRAAAFVMDDNILAGLVAKSSTPKAFAIVGPVLSSEPYGIMLAKD 237 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 D ++ I T + G + P Sbjct: 238 DPKFKAIADRTVN---NLWKTGQMDALYKKWFLSPIPP 272 >gi|169796221|ref|YP_001714014.1| glutamate/aspartate ABC transporter substrate-binding protein [Acinetobacter baumannii AYE] gi|184157850|ref|YP_001846189.1| amino acid ABC transporter periplasmic protein [Acinetobacter baumannii ACICU] gi|213157045|ref|YP_002319090.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Acinetobacter baumannii AB0057] gi|215483676|ref|YP_002325897.1| Glutamate/aspartate periplasmic-binding protein precursor [Acinetobacter baumannii AB307-0294] gi|239502273|ref|ZP_04661583.1| Glutamate/aspartate periplasmic-binding protein precursor [Acinetobacter baumannii AB900] gi|260555283|ref|ZP_05827504.1| glutamate/aspartate transporter [Acinetobacter baumannii ATCC 19606] gi|294838744|ref|ZP_06783427.1| Glutamate/aspartate periplasmic-binding protein precursor [Acinetobacter sp. 6013113] gi|294841311|ref|ZP_06785994.1| Glutamate/aspartate periplasmic-binding protein precursor [Acinetobacter sp. 6014059] gi|294859044|ref|ZP_06796813.1| Glutamate/aspartate periplasmic-binding protein precursor [Acinetobacter sp. 6013150] gi|301347722|ref|ZP_07228463.1| Glutamate/aspartate periplasmic-binding protein precursor [Acinetobacter baumannii AB056] gi|301512792|ref|ZP_07238029.1| Glutamate/aspartate periplasmic-binding protein precursor [Acinetobacter baumannii AB058] gi|301596773|ref|ZP_07241781.1| Glutamate/aspartate periplasmic-binding protein precursor [Acinetobacter baumannii AB059] gi|169149148|emb|CAM87027.1| glutamate/aspartate transport protein (ABC superfamily, peri_bind) [Acinetobacter baumannii AYE] gi|183209444|gb|ACC56842.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Acinetobacter baumannii ACICU] gi|193077140|gb|ABO11918.2| glutamate/aspartate transport protein [Acinetobacter baumannii ATCC 17978] gi|213056205|gb|ACJ41107.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Acinetobacter baumannii AB0057] gi|213988773|gb|ACJ59072.1| Glutamate/aspartate periplasmic-binding protein precursor [Acinetobacter baumannii AB307-0294] gi|260411825|gb|EEX05122.1| glutamate/aspartate transporter [Acinetobacter baumannii ATCC 19606] gi|323517739|gb|ADX92120.1| amino acid ABC transporter periplasmic protein [Acinetobacter baumannii TCDC-AB0715] Length = 297 Score = 207 bits (528), Expect = 2e-51, Method: Composition-based stats. Identities = 56/278 (20%), Positives = 99/278 (35%), Gaps = 13/278 (4%) Query: 1 MYKD---FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M + VS + L + TS A L IK G + G + V A G Sbjct: 1 MKRSATSLIVSTVMLCTVGATSQIQAADTLAKIKSTGKIVIGHRESSDPISYVVA-GKPV 59 Query: 58 GFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ VD C ++ I + K++Y + + R L + ID+ T + R+ Sbjct: 60 GYAVDICNQFANDIKKELKMPGLKVEYKAVTSSTRIPELLAGNIDMECGTTTNSKQRQQQ 119 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 +G + Y + GI S++ L+G ++ GTT++ + K + Sbjct: 120 VGFSTN--YYATEVRMAVKANSGIKSLADLNGKAVVTTQGTTSDKYIKMNEKGQAINVQN 177 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + + A + R A+ D + L L + P I+ ++S P I + Sbjct: 178 IYGKDHADSFAMMASGRAAAFVMDDNILAGLIAKSSTPKAFAIVGPVLSSEPYGIMIAKD 237 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 D ++ I T + G + P Sbjct: 238 DPKFKAIADRTVN---NLWKTGQMDALYKKWFLSPIPP 272 >gi|115358741|ref|YP_775879.1| extracellular solute-binding protein [Burkholderia ambifaria AMMD] gi|115284029|gb|ABI89545.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia ambifaria AMMD] Length = 298 Score = 207 bits (528), Expect = 2e-51, Method: Composition-based stats. Identities = 54/277 (19%), Positives = 95/277 (34%), Gaps = 11/277 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + F + L + A L IK G + GI V F+ G Sbjct: 1 MDRRFRWLAVALTCALAGTAHAQALTGTLKKIKDTGIVSLGIRESSVPFSYSDNQQKNIG 60 Query: 59 FDVDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + D + A+ + ++ +P+ ++ R LQ+ ID +T TL R+ Sbjct: 61 YSRDIAARIIDALKAELKAPNLTVKEIPITSQNRIPLLQNGTIDFECGSTTNTLERQKQA 120 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + Y G F K G+ + L+G ++ AGT+ E L + M I Sbjct: 121 AFSNSIFLY--GIRFSTRKDSGVKDFADLAGKTVATTAGTSDERLLRKLNEEKGMNMTII 178 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + E R A+ D LY + P + + + A + + D Sbjct: 179 SAKDHAEAFMNVTTGRAVAFVMDEPLLYGEIAKDRNPGAYTVAGTPLVHENYACMMRKDD 238 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + ++V + T+ G +K +Q P Sbjct: 239 PAFKHVVDGVIAKLQTS---GAAEKLYDQWFMQPIPP 272 >gi|254779722|ref|YP_003057828.1| ABC-type transport system, periplasmic component; putative amino-acid transporter GlnH; putative signal peptide [Helicobacter pylori B38] gi|254001634|emb|CAX29767.1| ABC-type transport system, periplasmic component; putative amino-acid transporter GlnH; putative signal peptide [Helicobacter pylori B38] Length = 287 Score = 207 bits (528), Expect = 2e-51, Method: Composition-based stats. Identities = 63/273 (23%), Positives = 119/273 (43%), Gaps = 10/273 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M+ F V I + S L IK+RG LK G+ + F V + G ++G+D Sbjct: 19 MWGLFLVLIALVFSACSDSHKEKKDALEVIKQRGILKVGVFSDKPPFGSVDSKGKYQGYD 78 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V + ++ + D +KI+++P+ A R L++ ++DI+ N T RE + A Sbjct: 79 VVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTHTKEREKVVDFAK-- 136 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y ++ K I ++ +L + V GTT + YF + + FE+ Sbjct: 137 -PYMKVALGVVSKDGVIKNIEELKDKELIVNKGTTADF----YFTKNYPNIKLLKFEQNT 191 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E A ++ A D + L A T P + + + K +APAI +G+ + Sbjct: 192 ETFLALLNNKAIALAHDNTLLLAW--TKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLEW 249 Query: 241 VSWTHYAMVTAEELG-ITQKNINQVSKDTTNPD 272 ++ ++++++ L ++ + V D P+ Sbjct: 250 LNNEMDSLISSDFLKEAYKETLEPVYGDGIKPE 282 >gi|238786077|ref|ZP_04630035.1| Glutamate/aspartate periplasmic-binding protein [Yersinia bercovieri ATCC 43970] gi|238713016|gb|EEQ05070.1| Glutamate/aspartate periplasmic-binding protein [Yersinia bercovieri ATCC 43970] Length = 309 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 46/251 (18%), Positives = 95/251 (37%), Gaps = 9/251 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS----KIQY 80 L IK G + G V F+ G+ D+ + A+ + +++ Sbjct: 38 DTLKKIKDSGVIVVGHRESSVPFSYYDNQQKVVGYAQDYSDLIVDAVKKKLNAPDLQVKL 97 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +P+ ++ R LQ+ D +T L R+ + G + K + Sbjct: 98 IPITSQNRIPLLQNGTFDFECGSTTNNLERQQQASF--SNTIFVVGTRLLTKKGSEVKDF 155 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L+G ++ V +GTT+E+ L + NM I + + + R A+ D + Sbjct: 156 KDLAGKTVVVTSGTTSEVLLNKLNEKDNMNMRIISAKDHGDSFRTLESGRAVAFMMDDAL 215 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L + +P + I+ S+ + + D + ++ T TA+ G+ +K+ Sbjct: 216 LAGERAKAKKPDQWDIVGTAQSQEAYGCMLRKNDPAFKALLDETI---ATAQTSGVAEKS 272 Query: 261 INQVSKDTTNP 271 ++ K+ P Sbjct: 273 FDRWFKNPIPP 283 >gi|110347169|ref|YP_665987.1| extracellular solute-binding protein [Mesorhizobium sp. BNC1] gi|110283280|gb|ABG61340.1| amino acid ABC transporter substrate-binding protein, PAAT family [Chelativorans sp. BNC1] Length = 303 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 57/291 (19%), Positives = 107/291 (36%), Gaps = 16/291 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + + + + + + L IK G + G V F+ + G+ Sbjct: 1 MLKKLCAFAVVMTAMCGGASADDLTGTLKKIKDTGVITVGNRDSSVPFSYLDDKQQPVGY 60 Query: 60 DVDFCRALSSAIFD----DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 VD C + A+ + D ++++ P+ + R + + +D+ +T T R+ + Sbjct: 61 AVDICLKVVDAVKERLKLDKLEVRFNPVTSATRIPLIANGTVDLECGSTFNTAERQKQVA 120 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F+ K ++S++ L G S+ +GT L + A + + I Sbjct: 121 F--SNTYFLTANRFVAKKSSNLNSIADLKGQSVVSTSGTVNIQELNEVNTAQQLGMNIIA 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS-KSPLAPAIIQGD 234 E R A+ D L +L + PS + I D S P A + + D Sbjct: 179 ANDHAEAFLMVETGRAAAFVMDDILLASLVAGSRDPSGYAISQDAFSNPQPYAIMLRRDD 238 Query: 235 TEWYNIVSWTHYAMVTAEE-LGITQKNINQV-------SKDTTNPDVQRFL 277 E+ +V A+ + E L I K NQ +P ++R Sbjct: 239 AEFKELVDDATAALYKSPEMLDIYNKWFNQAIPPRGLNLNVPLDPALKRAF 289 >gi|319943773|ref|ZP_08018054.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lautropia mirabilis ATCC 51599] gi|319743006|gb|EFV95412.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lautropia mirabilis ATCC 51599] Length = 274 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 58/273 (21%), Positives = 105/273 (38%), Gaps = 10/273 (3%) Query: 2 YKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 +K ++ L + S + A L IK ++ G+ F + + G +GFD Sbjct: 5 FKPVLMAALLAAGVVSGSHAMAADDGLARIKASDRIRIGVFGDKPPFGYIDSEGKSQGFD 64 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ + + + P K++Y+ A R L+S ++DI+ N T R + A Sbjct: 65 VEIAKDFAKDLLGSPDKVEYVITEAANRVEYLKSGKVDIILANFTQTKERARVVDFA--A 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 G + K I SV++L G ++ V GTT + YF + +++ Sbjct: 123 PYMKVSLGVVSPTKAPIKSVNELEGKTLLVNKGTTADA----YFSKKYPDISLLKYDQNT 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E A + R A D + L+A + P V + + +APA+ +GD Sbjct: 179 ETFDALKDGRGAALAHDNALLWAWAK--ENPGYEVAIGQLGEPEFIAPAVKKGDDALRAW 236 Query: 241 VSWTHYAMVTAEELG-ITQKNINQVSKDTTNPD 272 + + L +K + V D + Sbjct: 237 IDQEVAKLKQDGRLKAAYEKTLRPVYGDKVPAE 269 >gi|209520965|ref|ZP_03269702.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] gi|209498602|gb|EDZ98720.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] Length = 300 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 51/259 (19%), Positives = 95/259 (36%), Gaps = 7/259 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M ++ +F+ +A S L I++ G + G V F+ V +N GF Sbjct: 4 MNWSTVAVLVAATSASPGAFAQDATSTLAKIQQSGVIAIGHRETSVPFSYVDSNNQVIGF 63 Query: 60 DVDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 D C + A+ K++++P+ ++ R +Q+ +D+ T R+ + Sbjct: 64 SQDLCNKVIDAVKVKTKRPDLKVRFIPVTSQNRIPLVQNGTVDLECGVTTNLAARQSQVT 123 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + + K GI L+G ++ GTT+E L + M I Sbjct: 124 F--GDTFFVATTRLLTRKDSGIKDFPDLAGKTVVTNQGTTSERILRKMNEDKKMNMQIIS 181 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E + R AY D L + +PS+ +I S + + D Sbjct: 182 AKDYGEGRLTLESGRAVAYMMDDVLLAGTRTLTAKPSDWIITGTPQSSEAYGFMMRREDP 241 Query: 236 EWYNIVSWTHYAMVTAEEL 254 E+ +V T + E+ Sbjct: 242 EFRKLVDDTLEQTMKGPEI 260 >gi|167628301|ref|YP_001678800.1| glutamine abc transporter, glutamine-binding protein [Heliobacterium modesticaldum Ice1] gi|167591041|gb|ABZ82789.1| glutamine abc transporter, glutamine-binding protein [Heliobacterium modesticaldum Ice1] Length = 282 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 59/287 (20%), Positives = 113/287 (39%), Gaps = 33/287 (11%) Query: 1 MYKDFF--VSILCLIILFFT--------------------SFSTNASILGDIKKRGFLKC 38 M+K + +++ C L T T+ + IK RG+L Sbjct: 1 MFKKWTKGIALCCTAALLGTLAVGCGGSAPTGGEKKAAENQTQTSGDYIQTIKNRGYLIA 60 Query: 39 GINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97 G+ + F ++K+ +GF+VD + L+ +F D SK++ + ++ R LQ+ QI Sbjct: 61 GVKNDVPLFGQLKSGADKPEGFEVDIMKELAKKLFGDESKVKLEKVESQTRIPMLQNGQI 120 Query: 98 DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157 DI++ T T R+ + + + GQ ++ K I SV+ L G ++ G+T+ Sbjct: 121 DIVAGTTTITEERKKQIDF--SDVYFKAGQSLLVKKGSPIKSVTDLKGKTVSTVRGSTSA 178 Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 + + + E A + R DA T D S L + ++ Sbjct: 179 KNIREKAPDA----KVDEYATYTEAFQALKLGRSDAMTTDNSILMGFANEDPN---FELV 231 Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQKNINQ 263 + ++ P +G EW N V+ + + + +K + Sbjct: 232 GGLFTEEPYGFGFQKGHPEWVNYVNDFLKELKANGKYDELYKKWFKE 278 >gi|308186031|ref|YP_003930162.1| glutamate/aspartate transport system, periplasmic-binding protein precursor [Pantoea vagans C9-1] gi|308056541|gb|ADO08713.1| Glutamate/aspartate transport system, periplasmic-binding protein precursor [Pantoea vagans C9-1] Length = 298 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 50/275 (18%), Positives = 92/275 (33%), Gaps = 9/275 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + K +L + L I G + G V F+ G+ Sbjct: 3 LRKVALSLLLISAAAGAAQAEDLSGTLKKINDNGVIVVGHRESSVPFSYYDNQQKVVGYS 62 Query: 61 VDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 + A+ AI +K ++ +P+ ++ R LQ+ D +T L R+ Sbjct: 63 QAYSNAIVEAIKAKLNKPDLQVKMIPITSQNRIPLLQNGTYDYECGSTTNNLERQKQAAF 122 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + G ++ K I + L G ++ V +GTT+E+ L + I Sbjct: 123 --SDTIFVIGTRLLVKKDGPIKDFADLKGKTVVVTSGTTSEVLLHKLNDEQKLDMRIISA 180 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + R A+ D + L + +P IL SK + + D + Sbjct: 181 KDHGDSFRTLETGRAVAFMMDDALLAGERAKAKKPDNWEILGTPQSKEAYGCMLRKDDPQ 240 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + +V T A+ G +K + K P Sbjct: 241 FKALVDETI---AKAQTSGQAEKWFDTWFKQPIPP 272 >gi|172061134|ref|YP_001808786.1| extracellular solute-binding protein [Burkholderia ambifaria MC40-6] gi|171993651|gb|ACB64570.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MC40-6] Length = 306 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 46/273 (16%), Positives = 96/273 (35%), Gaps = 9/273 (3%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + V+ L + + L I++ G + G V F+ V A+G GF D Sbjct: 13 RSLLVAACALACGTALAAQPLSGTLEKIRQAGLISIGHRETSVPFSYVDASGKVIGFSQD 72 Query: 63 FCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 C + + + K ++++P+ ++ R +Q+ +D+ T R + Sbjct: 73 LCDRVIATVKARTGKPDLQVRFIPVTSQNRIPLVQNGTVDLECGVTTNLAARHAQVAF-- 130 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + + GI L+G ++ GTT+E L + M I + Sbjct: 131 STTFFVATTRLLTRTSSGIRDFPDLAGKTVVTNQGTTSERLLRKMNEEKKMNMQIISAKD 190 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E + R AY D L ++ +P++ I+ S + + D ++ Sbjct: 191 YGEGRLTLESGRAAAYMMDDVLLAGVRQLAAKPADWAIVGTPQSSEAYGFMLRKDDPQFK 250 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 +V ++ + E+ ++ P Sbjct: 251 ALVDGVLVQLMKSGEIN---ALYDKWFMKPVPP 280 >gi|158321705|ref|YP_001514212.1| extracellular solute-binding protein [Alkaliphilus oremlandii OhILAs] gi|158141904|gb|ABW20216.1| extracellular solute-binding protein family 3 [Alkaliphilus oremlandii OhILAs] Length = 285 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 63/279 (22%), Positives = 114/279 (40%), Gaps = 21/279 (7%) Query: 4 DFFVSILCLIILFFTSFSTNA------SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 V I+ + L S + L IK+RG ++ G+ + F V ANG+ + Sbjct: 10 TLLVGIVVIGGLVACSPKAGSEAGGTVDSLDAIKERGTIRIGVFSDKAPFGYVDANGENQ 69 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDV + + + D SK++++ + A R L+S ++DI+ N T R+ + A Sbjct: 70 GFDVHIAKRFAKDLLGDESKVEFVLVEAANRVAFLESNKVDIIMANFTVTEERKEKVDFA 129 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 G + I+S+ L + V GTT + DYF ++ + + ++ Sbjct: 130 N--PYMKVSLGIVSPDGALITSIEDLKDQKLIVNKGTTAQ----DYFTKNHPEIELLKYD 183 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + E A + R A D + + A P V +P + ++ +APA+ +G+TE Sbjct: 184 QNTEAFEALKDLRGAALAHDNTEVLAWAKG--NPGFTVGIPVLGNQDVIAPAVKKGNTEL 241 Query: 238 YNIVSWTHYAMVTAEELGITQKNIN----QVSKDTTNPD 272 W + + + K V D P+ Sbjct: 242 LA---WINEELAKLGKESFITKAYEDTLLPVYGDDIAPN 277 >gi|94313505|ref|YP_586714.1| glutamate/aspartate ABC transporter periplasmic solute-binding protein [Cupriavidus metallidurans CH34] gi|93357357|gb|ABF11445.1| glutamate/aspartate transport protein (ABC superfamily, peri_bind) high affinity periplasmic solute-binding protein [Cupriavidus metallidurans CH34] Length = 304 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 51/242 (21%), Positives = 94/242 (38%), Gaps = 8/242 (3%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA----IFDDPSKI 78 + +L I+ G + G + F+ G G+ VD C ++ A + K+ Sbjct: 33 QSPVLDRIRDSGTITLGYRESALPFSFGDDKGQPAGYAVDLCLRVAEAAKEKLGLKTIKV 92 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 ++LPL + R A+ + +D+ TL R+ + + Y ++ GI Sbjct: 93 RWLPLTPQNRVPAVVNGLVDLDCAPNTNTLERQKQVAFSVS--HYVSTVRMLVRADSGIK 150 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 S L G ++ AG+T + + Y + + E R A+ D Sbjct: 151 SFDDLRGKTVVTSAGSTGDRHVRRL--KAEYGYRDVYAKDHGESFLLLETGRAQAFVMDD 208 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 L L+ + PS++VI+ +S A + + D EW +V T T+ ++ Q Sbjct: 209 VLLAGLRAKSKDPSQYVIVGPALSVEQNALMLSKADPEWKRLVDQTLAKTFTSPDVAAMQ 268 Query: 259 KN 260 K Sbjct: 269 KR 270 >gi|170700094|ref|ZP_02891116.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] gi|170135008|gb|EDT03314.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] Length = 298 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 54/277 (19%), Positives = 95/277 (34%), Gaps = 11/277 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + F + L + A L IK G + GI V F+ G Sbjct: 1 MDRRFRWLAVALTCALAGTAHAQALTGTLKKIKDTGIVSLGIRESSVPFSYSDNQQKNIG 60 Query: 59 FDVDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + D + A+ + ++ +P+ ++ R LQ+ ID +T TL R+ Sbjct: 61 YSRDIAARIIDALKAELKAPNLTVKEIPITSQNRIPLLQNGTIDFECGSTTNTLERQKQA 120 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + Y G F K G+ + L+G ++ AGT+ E L + M I Sbjct: 121 AFSNSIFLY--GIRFSTRKDSGVKDFTDLAGKTVATTAGTSDERLLRKLNEEKGMNMTII 178 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + E R A+ D LY + P + + + A + + D Sbjct: 179 SAKDHAEAFMNVTTGRAVAFVMDEPLLYGEIAKDRNPGAYTVAGTPLVHENYACMMRKDD 238 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + ++V + T+ G +K +Q P Sbjct: 239 PAFKHVVDGVIAKLQTS---GAAEKLYDQWFMQPIPP 272 >gi|123443206|ref|YP_001007180.1| glutamate and aspartate transporter subunit [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122090167|emb|CAL13030.1| putative amino acid-binding protein precursor [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 304 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 94/254 (37%), Gaps = 9/254 (3%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS----K 77 + L IK G + G V F+ G+ D+ + AI + + Sbjct: 30 ASVDTLKKIKDNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNLIVDAIKKKLNAPDLQ 89 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++ +P+ ++ R LQ+ D +T L R+ + G + K + Sbjct: 90 VKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQQQAAF--SNTIFVVGTRLLTKKGSEV 147 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 L+G + V +GTT+E+ L + M I + + + R A+ D Sbjct: 148 KDFKDLAGKPVVVTSGTTSEVLLNKLNEKDKMNMRIISAKDHGDSFRTLESGRAVAFMMD 207 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 + L + +P + I+ S+ + + D + ++ T TA+ G+ Sbjct: 208 DALLAGERAKAKKPDQWDIVGTPQSQEAYGCMLRKNDPAFKTLLDETI---ATAQTSGVA 264 Query: 258 QKNINQVSKDTTNP 271 +K+ ++ K+ P Sbjct: 265 EKSFDRWFKNPIPP 278 >gi|33598570|ref|NP_886213.1| amino-acid ABC transporter binding protein precursor [Bordetella parapertussis 12822] gi|33603520|ref|NP_891080.1| amino-acid ABC transporter binding protein precursor [Bordetella bronchiseptica RB50] gi|33574699|emb|CAE39356.1| amino-acid ABC transporter binding protein precursor [Bordetella parapertussis] gi|33577644|emb|CAE34909.1| amino-acid ABC transporter binding protein precursor [Bordetella bronchiseptica RB50] Length = 299 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 48/274 (17%), Positives = 97/274 (35%), Gaps = 9/274 (3%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K V L+ + ++ + L IK G + G + F+ + G+ + Sbjct: 1 MKISTVFFAALVGVAASAPAHAEGRLDKIKSSGTITIGHRDASIPFSYLDDKQKPIGYSM 60 Query: 62 DFCR----ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 + C A+ + + K+ +P+ + R + + +D++ + T+ R+ + A Sbjct: 61 EICEKAVEAIKAKLGMAQIKVNLVPVTSSTRIPLVANGTVDLVCGSATNTVERQQQVAFA 120 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 P T+ F K + + + G ++ AGT+ L + + I + Sbjct: 121 --PTTFVTATRFAAKKSSNLKKLDDMKGKTVVSTAGTSNIRWLTQANEKDGLDMRIIPTK 178 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 R A+ D L L T +P E +I D + P A + + D + Sbjct: 179 DHPAAMLTVANGRAAAFFMDDVLLAGLVATERKPDEWMISEDTYTVEPYALILPKDDPAF 238 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 +V T M+ G K + + P Sbjct: 239 KKVVDDTVTGMMR---DGSLAKLYKKWFESPIPP 269 >gi|238795397|ref|ZP_04638912.1| Glutamate/aspartate periplasmic-binding protein [Yersinia mollaretii ATCC 43969] gi|238720516|gb|EEQ12317.1| Glutamate/aspartate periplasmic-binding protein [Yersinia mollaretii ATCC 43969] Length = 309 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 45/251 (17%), Positives = 95/251 (37%), Gaps = 9/251 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS----KIQY 80 L IK G + G V F+ G+ D+ + A+ + +++ Sbjct: 38 DTLKKIKDSGVIVVGHRESSVPFSYYDNQQKVVGYAQDYSDLIVDAVKKKLNAPDLQVKL 97 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +P+ ++ R LQ+ D +T L R+ + G + K + Sbjct: 98 IPITSQNRIPLLQNGTFDFECGSTTNNLERQQQASF--SNTIFVVGTRLLTKKGSEVKDF 155 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L+G ++ V +GTT+E+ L + N+ I + + + R A+ D + Sbjct: 156 KDLAGKTVVVTSGTTSEVLLNKLNEKDNLNMRIISAKDHGDSFRTLESGRAVAFMMDDAL 215 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L + +P + I+ S+ + + D + ++ T TA+ G+ +K+ Sbjct: 216 LAGERAKAKKPDQWDIVGTAQSQEAYGCMLRKNDPAFKALLDETI---ATAQTSGVAEKS 272 Query: 261 INQVSKDTTNP 271 ++ K+ P Sbjct: 273 FDRWFKNPIPP 283 >gi|332160868|ref|YP_004297445.1| glutamate and aspartate transporter subunit [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325665098|gb|ADZ41742.1| glutamate and aspartate transporter subunit [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330863400|emb|CBX73522.1| glutamate/aspartate periplasmic-binding protein [Yersinia enterocolitica W22703] Length = 304 Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 94/254 (37%), Gaps = 9/254 (3%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS----K 77 + L IK G + G V F+ G+ D+ + AI + + Sbjct: 30 ASVDTLKKIKDNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNLIVDAIKKKLNAPDLQ 89 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++ +P+ ++ R LQ+ D +T L R+ + G + K + Sbjct: 90 VKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQQQAAF--SNTIFVVGTRLLTKKGSEV 147 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 L+G + V +GTT+E+ L + M I + + + R A+ D Sbjct: 148 KDFKDLAGKPVVVTSGTTSEVLLNKLNEKDKMNMRIISAKDHGDSFRTLESGRAVAFMMD 207 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 + L + +P + I+ S+ + + D + ++ T TA+ G+ Sbjct: 208 DALLAGERAKAKKPDQWDIVGTPQSQEAYGCMLRKDDPAFKTLLDETI---ATAQTSGVA 264 Query: 258 QKNINQVSKDTTNP 271 +K+ ++ K+ P Sbjct: 265 EKSFDRWFKNPIPP 278 >gi|290580111|ref|YP_003484503.1| putative ABC transporter glutamine binding protein [Streptococcus mutans NN2025] gi|254997010|dbj|BAH87611.1| putative ABC transporter glutamine binding protein [Streptococcus mutans NN2025] Length = 270 Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats. Identities = 60/279 (21%), Positives = 121/279 (43%), Gaps = 22/279 (7%) Query: 3 KDFFVSILCLIILFFT--------SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-N 53 K F +S+ LI++ + + + + IK+ G LK G+ + F A Sbjct: 4 KKFLISLAALIMIATGLSGLSKVNADNVTSPQVKKIKRAGVLKVGVKQDVPNFGYYNAET 63 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G ++G ++D R ++ +I K++ +P+ + R + + Q+D++ T R+ S Sbjct: 64 GKYEGMEIDIARKIAKSIG---VKLELVPVTTQTREPLMDNGQVDLVIATYTITPERQAS 120 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + Y+D GF++ + IS +S L G +I V G TT++ L Y K H++K++ Sbjct: 121 --YSISKPYYYDQIGFLVRQSSKISKISDLDGLTIGVSQGATTKVNLEAYAKKHHLKFNY 178 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + E+ + + R DA++ D S L + +L + A + Sbjct: 179 VQLGSFPELAISLYSKRIDAFSVDKSILTGYVSKQSK-----LLKYGFNTQEYGIATKKS 233 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272 +T V++ + L + N+ + ++ PD Sbjct: 234 NTGLTKYVNYLLKKWTADKSL---ESIYNKHNLESAKPD 269 >gi|22536881|ref|NP_687732.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus agalactiae 2603V/R] gi|76788013|ref|YP_329465.1| polar amino acid ABC transporter amino acid-binding protein [Streptococcus agalactiae A909] gi|76798186|ref|ZP_00780437.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus agalactiae 18RS21] gi|22533731|gb|AAM99604.1|AE014224_7 amino acid ABC transporter, amino acid-binding protein [Streptococcus agalactiae 2603V/R] gi|76563070|gb|ABA45654.1| polar amino acid uptake (PAAT) family ABC transporter, amino acid-binding protein [Streptococcus agalactiae A909] gi|76586449|gb|EAO62956.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus agalactiae 18RS21] Length = 266 Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats. Identities = 65/258 (25%), Positives = 107/258 (41%), Gaps = 12/258 (4%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVD 62 F++ I L F ST+A+ L +IKK G LK G+ + F A ++G ++D Sbjct: 8 TFYLLSCIFIFLLFYPNSTSANQLSEIKKSGVLKVGVKQDVPNFGYYNAETNQYEGMEID 67 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + ++ ++ P ++P A+ R + + QIDIL T R+ Sbjct: 68 IAKKIAKSLGVKPV---FVPTTAQTREPLMDNGQIDILIATYTITPERKA--NYNISKAY 122 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y D GF++ K I ++ +L G I V G TT++ L Y K H +K+ E+ Sbjct: 123 YHDEIGFLVRKNSHIKTIKELDGKHIGVAQGATTKVNLEKYAKEHKLKFSYAQLGSFPEL 182 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + A+R DA++ D S L + IL + + A + D V+ Sbjct: 183 AISLYANRIDAFSVDKSILSGYLSPHTT-----ILKEGFNTQEYGIATSKQDKVLIPYVN 237 Query: 243 WTHYAMVTAEELG-ITQK 259 + L I QK Sbjct: 238 KLLVSWEKDGSLKHIYQK 255 >gi|167587241|ref|ZP_02379629.1| extracellular solute-binding protein, family 3 [Burkholderia ubonensis Bu] Length = 271 Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats. Identities = 65/278 (23%), Positives = 102/278 (36%), Gaps = 14/278 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59 M + L + L + +A L DI+K G L+ F V A + G Sbjct: 1 MKIHTLATWLVGVALVTAGSAAHADRLDDIRKAGVLRVATFDSNPPFGFVDAKTNHIVGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD+ +AL+ + K+Q P N R L S ++D++ N T R + + Sbjct: 61 DVDYAKALADKLG---VKLQLQPTNPANRIPFLTSGKVDLVLANFTITDERAKQVDFS-- 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I YF + KK + S QL+G + GTT E+TL + + + ++ Sbjct: 116 -IPYFSSGQQFLAKKGVLKSAEQLNGLRVGADKGTTNEITLREKYPKA----TIVAYDDT 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AA RA A T D L L + I IS + + +G+T Sbjct: 171 PFAFAALRAGNVQAITQDGPKLIGLLANVPDKQNYEIPAFAISNDYMGVGVPKGETRLLG 230 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277 V+ T E G + + T + R Sbjct: 231 FVNDTLKG---LEASGRATQIYDAWFGPATKTPLTRIF 265 >gi|78062134|ref|YP_372042.1| extracellular solute-binding protein [Burkholderia sp. 383] gi|77970019|gb|ABB11398.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia sp. 383] Length = 298 Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats. Identities = 55/277 (19%), Positives = 94/277 (33%), Gaps = 11/277 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + + L + A L IK G + GI V F+ G Sbjct: 1 MDRRLRWLAVALSCALAGTAHAQALTGTLKKIKDTGVVSLGIRESSVPFSYSDNQQKNIG 60 Query: 59 FDVDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + D + + D + ++ +P+ ++ R LQ+ ID +T TL R+ Sbjct: 61 YSRDIAARIIDQLKTDLNAPNLAVKEIPITSQNRIPLLQNGTIDFECGSTTNTLERQKQA 120 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + Y G F K G+ + L+G ++ AGT+ E L + M I Sbjct: 121 AFSNSIFLY--GIRFSTRKDSGVKDFADLAGKTVATTAGTSDERLLRKLNEEKAMNMTII 178 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + E R A+ D LY + P + + + A + + D Sbjct: 179 SAKDHAEAFMNVTTGRAVAFVMDEPLLYGEIAKDRNPGAYTVTGTPLVHENYACMMRRDD 238 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + ++V M T+ G +K NQ P Sbjct: 239 PAFKHVVDGVIAKMQTS---GAAEKLYNQWFTQPIPP 272 >gi|330837353|ref|YP_004411994.1| amino acid ABC transporter substrate-binding protein, PAAT family [Spirochaeta coccoides DSM 17374] gi|329749256|gb|AEC02612.1| amino acid ABC transporter substrate-binding protein, PAAT family [Spirochaeta coccoides DSM 17374] Length = 269 Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats. Identities = 64/270 (23%), Positives = 108/270 (40%), Gaps = 18/270 (6%) Query: 1 MYKDF---FVSILCLIILFFTSFSTNASI-------LGDIKKRGFLKCGINTGLVGFAEV 50 M K V +LC++++ + S + IK RG L G+ + GF Sbjct: 1 MKKKCISGLVMLLCVMLVSTSVLFAAGSKESGASNEVDKIKSRGVLNVGVKVDVPGFGYK 60 Query: 51 K-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 + G GF+ D R ++ I D SK+ + P+ AK R L + ++DI+ T Sbjct: 61 DISTGANVGFETDLARQIAKVILGDASKVSFTPVTAKTRGPLLDTGELDIVIATFTVTEE 120 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 R++S I Y D ++ K G S+ L G +I V TT+ L K + Sbjct: 121 RKLSYEF--STIYYTDAVSLLVKKSGGYKSLKDLDGKTIGVAQSATTKAVLETEAKNQGI 178 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + E+ A + R D+++ D + L ILPD S A Sbjct: 179 TLKFSEYASYPELKVALDSGRIDSFSVDRAILMGYV-----EDSSEILPDKYSPQEYGAA 233 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 + +G+ ++V+ T + + EL + Sbjct: 234 MKKGNLALLSVVNSTIADLDASGELLAMKA 263 >gi|167748158|ref|ZP_02420285.1| hypothetical protein ANACAC_02902 [Anaerostipes caccae DSM 14662] gi|167652150|gb|EDR96279.1| hypothetical protein ANACAC_02902 [Anaerostipes caccae DSM 14662] Length = 289 Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats. Identities = 61/274 (22%), Positives = 108/274 (39%), Gaps = 22/274 (8%) Query: 1 MYK----DFFVSILCLIILFFTSF-------STNASILGDIKKRGFLKCGINTGLVGFAE 49 M K +++L + I T S N S + IKK G +K G+ + F Sbjct: 1 MKKFSRILVVLAVLSMAIGLMTGCGNKKSEKSDNQSSVEQIKKNGKIKVGVFSDKPPFGY 60 Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 V NG +G+DV L+ + D +K++++ + A R LQS ++D++ N T Sbjct: 61 VDKNGKNQGYDVVLAHRLAKDLLGDENKVEFVLVEAASRVEFLQSNKVDVILANFTVTDE 120 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 R + + G + K I+ V QL G + V GTT E YF Sbjct: 121 R--KEVVDYALPYMKVSLGVVSPNGKVITDVKQLKGKKLIVNKGTTAET----YFTQKYP 174 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + +++ E A + R A D + +YA + + + +APA Sbjct: 175 DIELLKYDQNTEAFNALKDGRGAALAHDNTLVYAWA--RENKGFTTGIKSLGEHDFIAPA 232 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 + +G+ + W + + G +K+ + Sbjct: 233 VKKGNDDLK---GWIDDEITKLTKEGFFEKDYKK 263 >gi|307257780|ref|ZP_07539537.1| hypothetical protein appser10_17650 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306863686|gb|EFM95612.1| hypothetical protein appser10_17650 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 298 Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats. Identities = 60/278 (21%), Positives = 119/278 (42%), Gaps = 17/278 (6%) Query: 3 KDFFVSILCLIILFF------TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 K + + L ST + IK++G ++ G+ F V ANG Sbjct: 28 KTLLATAITAFALTACDNANNAQSSTAKDSVAQIKEKGVIRIGVFGDKPPFGHVDANGKS 87 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +GFDV+ + +++ + P K++++ A R L+S ++D++ N T R + + Sbjct: 88 QGFDVEIAKEIANDLLGSPDKVEFVLTEAANRVEYLKSNKVDLILANFTKTPER--AEVV 145 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F G + K IS + QL G ++ V GTT + YF ++ + + + F Sbjct: 146 DFATPYMNVALGVVSPKGALISDLKQLEGKTLLVNKGTTADA----YFTKNHPEINLLKF 201 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 ++ E A + R A D + ++A + P+ V + + +APA+ +G+ Sbjct: 202 DQNTETFDALKDGRGVALAHDNALVWAWAK--ENPTFDVAIGSVGPAEQIAPAVKKGNQA 259 Query: 237 WYNIVSWTHYAMVTAEELG-ITQKNINQVSKDTTNPDV 273 ++++ T +L +K + V D P++ Sbjct: 260 LLDVINKEIAEFKTNGKLKAAYEKTLVPVYGD--KPEL 295 >gi|317009782|gb|ADU80362.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter pylori India7] Length = 277 Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats. Identities = 62/269 (23%), Positives = 117/269 (43%), Gaps = 10/269 (3%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F V I + S L IK+RG LK G+ + F V + G ++G+DV Sbjct: 13 FLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGYDVVIA 72 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 + ++ + D +KI+++P+ A R L++ ++DI+ N T RE + A Y Sbjct: 73 KRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKVVDFAK---PYM 129 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K I ++ +L + V GTT + YF + + FE+ E Sbjct: 130 KVALGVVSKDGVIKNIEELKDKELIVNKGTTADF----YFTKNYPNIKLLKFEQNTETFL 185 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 A ++ A D + L A T P + + + K +APAI +G+ + ++ Sbjct: 186 ALLNNKATALAHDNTLLLAW--TKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLEWLNNE 243 Query: 245 HYAMVTAEELG-ITQKNINQVSKDTTNPD 272 ++++++ L ++ + V D P+ Sbjct: 244 IDSLISSDFLKEAYKETLEPVYGDGIKPE 272 >gi|210135331|ref|YP_002301770.1| glutamine ABC transporter periplasmic glutamine-binding protein [Helicobacter pylori P12] gi|210133299|gb|ACJ08290.1| glutamine ABC transporter periplasmic glutamine-binding protein [Helicobacter pylori P12] Length = 277 Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats. Identities = 61/269 (22%), Positives = 116/269 (43%), Gaps = 10/269 (3%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F V I + S L IK+RG LK G+ + F V + G ++G+DV Sbjct: 13 FLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGYDVVIA 72 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 + ++ + D +KI+++P+ A R L++ ++DI+ N T RE + A Y Sbjct: 73 KRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKVVDFAK---PYM 129 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K I ++ +L + V GTT + YF + + FE+ E Sbjct: 130 KVALGVVSKDGVIKNIEELKNKELIVNKGTTADF----YFTKNYPNIKLLKFEQNTETFL 185 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 A ++ A D + L A P + + + K +APAI +G+ + ++ Sbjct: 186 ALLNNKATALAHDNTLLLAWAKQ--HPEFKLGITSLGDKDVIAPAIKKGNPKLLEWLNNE 243 Query: 245 HYAMVTAEELG-ITQKNINQVSKDTTNPD 272 ++++++ L ++ + V D P+ Sbjct: 244 MDSLISSDFLKEAYKETLEPVYGDEIKPE 272 >gi|291326463|ref|ZP_06124623.2| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Providencia rettgeri DSM 1131] gi|291314316|gb|EFE54769.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Providencia rettgeri DSM 1131] Length = 288 Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats. Identities = 45/267 (16%), Positives = 98/267 (36%), Gaps = 9/267 (3%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 ++ L L IK G + G V F+ + G+ D+ A+ Sbjct: 1 MMILGATCAVQAEELNGTLKKIKDNGVIVVGHRESSVPFSYYDNSQKVVGYSQDYSNAIV 60 Query: 69 SAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 A+ + +++ +P+ ++ R LQ+ D +T + R+ + Sbjct: 61 DAVKKKLNMPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAAF--SNTIFV 118 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 G + G+ + L+G ++ V +GTT+E+ L NMK I + + Sbjct: 119 VGTRLLTKGDSGVKDFADLAGKNVVVTSGTTSEILLNQLNDEKNMKMRIISAKDHGDSFR 178 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + R A+ D + L + +P I+ ++ + + D ++ ++ T Sbjct: 179 TLESGRAVAFMMDDALLAGERAKAKKPDIWEIVGKPQTEEAYGCMLRKDDPQFKALIDET 238 Query: 245 HYAMVTAEELGITQKNINQVSKDTTNP 271 A+ G+ +K+ ++ P Sbjct: 239 I---ANAQTSGVAEKSFDRWFNQPIPP 262 >gi|91780195|ref|YP_555402.1| polar amino acid ABC transporter periplasmic ligand-binding protein [Burkholderia xenovorans LB400] gi|91692855|gb|ABE36052.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia xenovorans LB400] Length = 272 Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats. Identities = 68/284 (23%), Positives = 104/284 (36%), Gaps = 14/284 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFD 60 K + S + +L S +A L DIKK G L+ F V G D Sbjct: 1 MKIWTRSAAVVGLLLTLSGVAHADRLDDIKKAGVLRVATFDSNPPFGFVDPKTNQIVGLD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+ RA+++ + K++ P N R L+S ++D++ N T R+ + + Sbjct: 61 VDYARAVAAKLG---VKLEIQPTNPANRIAFLKSNKVDLVFANFTITDERKKEIDFS--- 114 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 YF + KK + S QL I GTT E + F A + ++ Sbjct: 115 TPYFASGTQFIAKKGVLKSPQQLDSLRIGADKGTTNEQQVRAQFPAA----TIVAYDDTP 170 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 AA RA A T D L AL ++ I P IS + + + N+ Sbjct: 171 FAFAALRAGNVQAITQDGPKLVALLANVPDKEKYEIPPFTISNDYEGVGVPKNEARLLNV 230 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSN 284 V+ T V E G K +Q + + R I Sbjct: 231 VNETL---VGLEANGNAAKIYDQWFGPGSKAPLPRLFKIGDPQK 271 >gi|253827634|ref|ZP_04870519.1| glutamine ABC transporter, periplasmic glutamine- binding protein glnH [Helicobacter canadensis MIT 98-5491] gi|253511040|gb|EES89699.1| glutamine ABC transporter, periplasmic glutamine- binding protein glnH [Helicobacter canadensis MIT 98-5491] Length = 273 Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats. Identities = 60/270 (22%), Positives = 114/270 (42%), Gaps = 16/270 (5%) Query: 1 MYKDFFVSILCLIILFFT----SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K F + +L + L + ++ L IK++G + G+ + F + G Sbjct: 1 MKKIFLIVMLGFLGLGLVGCGEAQQNASNSLEAIKQKGVITIGVFSDKPPFGFINKEGGN 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFDV R ++ + D SK+++ + A R L+S ++D++ N T RE + Sbjct: 61 DGFDVQVSRQIAKDLLGDSSKVKFELVEAASRVEFLKSGKVDVIMANFTKTPEREAVVDF 120 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 A Y ++ K I S+ L G + V GTT + YF ++ + + + Sbjct: 121 AL---PYMKVALGVVSKDGAIKSIEDLKGKKLIVNKGTTADF----YFSKNHPEIELLKY 173 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 ++ E A + R DA D ++A + P V + + ++ +APA+ +GD E Sbjct: 174 DQNTETFLALKDGRGDALAHDNLLVFAWAK--ENPGFEVGITKLGNEDVIAPAVKKGDKE 231 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSK 266 W + + T + G ++ + Sbjct: 232 LLE---WLNKEIDTLNKNGFMKEAYQETLA 258 >gi|254252393|ref|ZP_04945711.1| ABC-type amino acid transport/signal transduction systems periplasmic component [Burkholderia dolosa AUO158] gi|124895002|gb|EAY68882.1| ABC-type amino acid transport/signal transduction systems periplasmic component [Burkholderia dolosa AUO158] Length = 271 Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats. Identities = 69/278 (24%), Positives = 102/278 (36%), Gaps = 14/278 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 M + L L + +A L DI+K G L+ F V A G Sbjct: 1 MKIHTLATWLIGAALVTAGAAAHADRLDDIRKAGVLRVATFDSNPPFGYVDAKSNRIVGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD+ +AL+ + K+Q P N R L S ++D++ N T R + + Sbjct: 61 DVDYAKALADKLG---VKLQLQPTNPANRIPFLTSGKVDLVLANFTITDERAKQVDFS-- 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I YF + KK + S QL+G I GTT E+TL + F + ++ Sbjct: 116 -IPYFSSGQQFLAKKGVLKSADQLNGLRIGADKGTTNEITLREKFPKA----TIVAYDDT 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AA RA A T D L L + I P IS + + +G+T Sbjct: 171 PFAFAALRAGNVQAITQDGPKLIGLLANVPDKQNYEIPPFTISNDYMGVGVPKGETRLLG 230 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277 V+ T E G + + TT + R Sbjct: 231 FVNDTLKG---LEASGRAAQIYDAWFGPTTKTPLARIF 265 >gi|227327385|ref|ZP_03831409.1| glutamate and aspartate transporter subunit [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 298 Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats. Identities = 48/275 (17%), Positives = 95/275 (34%), Gaps = 9/275 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L A L +K G + G V F+ G+ Sbjct: 3 MRKLALSLLLLGTAASVAQAEDLAGTLKKVKDNGVIVIGHRESSVPFSYYDNTQKVVGYS 62 Query: 61 VDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 + + A+ +++ LP+ ++ R LQ+ D +T L R+ Sbjct: 63 QAYSDKIVEAVKKKLDAPNLQVKLLPITSQNRIPLLQNGTFDFECGSTTNNLERQKQAAF 122 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + G + K G+ L+G ++ V +GTT+E+ L + +K I Sbjct: 123 --SNTIFVVGTRLLTKKDSGVKDFPDLAGKTVVVTSGTTSEVLLNKLNEEKQLKMRIISA 180 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + + R A+ D + L + + I+ S+ + + D + Sbjct: 181 KDHGDSFRTLESGRAVAFMMDDALLAGERAKAKNADQWDIVGKAQSEEAYGCMLRKDDPQ 240 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + +V T + T+ E +K ++ K P Sbjct: 241 FKKLVDDTIAEVQTSGE---AEKWFDRWFKQPIPP 272 >gi|315635238|ref|ZP_07890515.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Aggregatibacter segnis ATCC 33393] gi|315475984|gb|EFU66739.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Aggregatibacter segnis ATCC 33393] Length = 285 Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats. Identities = 63/250 (25%), Positives = 111/250 (44%), Gaps = 15/250 (6%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L I+K G ++ G+ + F V A G +GFDV+ +A+ + D +K++++ ++ Sbjct: 38 SSLEQIQKDGKVRIGVFSDKPPFGYVDAQGKSQGFDVEIGKAIGKDLLGDENKVEFVLVD 97 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 A R L SK++DI+ N T R+ + A G + I+ + QL Sbjct: 98 AANRAEYLLSKKVDIILANFTVTPARKEVVDFAN--PYMKVALGVVSKDGSVITDLEQLK 155 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G ++ V GTT ++ +F + + FE+ E A R R DA + D + L+A Sbjct: 156 GKTLIVDKGTTADI----FFTKNYPDVKLLKFEQNTETFEALRDGRGDALSNDNTFLFAW 211 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG----ITQKN 260 P V + + + +APA+ + E +W + + T + G +K Sbjct: 212 AKQ--NPGYTVGVKNFGDQDVIAPAVRKDAPELL---NWLNNEIQTLGKDGRLKQAYEKT 266 Query: 261 INQVSKDTTN 270 + V DT N Sbjct: 267 LLPVYGDTVN 276 >gi|307262182|ref|ZP_07543833.1| hypothetical protein appser12_17280 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306868159|gb|EFM99984.1| hypothetical protein appser12_17280 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 298 Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats. Identities = 59/278 (21%), Positives = 119/278 (42%), Gaps = 17/278 (6%) Query: 3 KDFFVSILCLIILFF------TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 K + + L ST + IK++G ++ G+ F V ANG Sbjct: 28 KTLLATAITAFALTACDNANNAQSSTAKDSVAQIKEKGVIRIGVFGDKPPFGYVDANGKS 87 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +GFDV+ + +++ + P K++++ A R L+S ++D++ N T R + + Sbjct: 88 QGFDVEIAKEIANDLLGSPDKMEFVLTEAANRVEYLKSNKVDLILANFTKTPER--AEVV 145 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F G + K I+ + QL G ++ V GTT + YF ++ + + + F Sbjct: 146 DFAAPYMNVALGVVSPKGALITDLKQLEGKTLLVNKGTTADA----YFTKNHPEINLLKF 201 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 ++ E A + R A D + ++A + P+ V + + +APA+ +G+ Sbjct: 202 DQNTETFDALKDGRGVALAHDNALVWAWAK--ENPTFDVAIGSVGPAEQIAPAVQKGNQA 259 Query: 237 WYNIVSWTHYAMVTAEELG-ITQKNINQVSKDTTNPDV 273 ++++ T +L +K + V D P++ Sbjct: 260 LLDVINKEIAEFKTNGKLKAAYEKTLVPVYGD--KPEL 295 >gi|298735821|ref|YP_003728346.1| putative glutamine transport system substrate-binding protein [Helicobacter pylori B8] gi|298355010|emb|CBI65882.1| putative glutamine transport system substrate-binding protein [Helicobacter pylori B8] Length = 277 Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats. Identities = 63/273 (23%), Positives = 118/273 (43%), Gaps = 10/273 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M+ F V I + S L IK+RG LK G+ + F V + G ++G+D Sbjct: 9 MWGLFLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGYD 68 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V + ++ + D +KI+++P+ A R L++ ++DI+ N T RE + A Sbjct: 69 VVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKVVDFAK-- 126 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y ++ K I ++ +L + V GTT + YF + + FE+ Sbjct: 127 -PYMKVALGVISKDGVIKNIEELKDKELIVNKGTTADF----YFTKNYPNIKLLKFEQNT 181 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E A ++ A D + L A P + + + K +APAI +G+ + Sbjct: 182 ETFLALLNNKATALAHDNTLLLAWIKQ--HPEFKLGITSLGDKDVIAPAIKKGNPKLLEW 239 Query: 241 VSWTHYAMVTAEELG-ITQKNINQVSKDTTNPD 272 ++ ++++++ L Q+ + V D P+ Sbjct: 240 LNNEIDSLISSDFLKEAYQETLAPVYGDEIKPE 272 >gi|187928559|ref|YP_001899046.1| family 3 extracellular solute-binding protein [Ralstonia pickettii 12J] gi|187725449|gb|ACD26614.1| extracellular solute-binding protein family 3 [Ralstonia pickettii 12J] Length = 297 Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats. Identities = 50/273 (18%), Positives = 98/273 (35%), Gaps = 9/273 (3%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + S L + L + +A L + G + G V F+ + A GF VD Sbjct: 4 RHTLASTLVVAGLTVAAQGIHAQTLEKVAAAGKITVGYREAAVPFSYLLAPNKAVGFSVD 63 Query: 63 FCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 +A+ + K + +P+ R L + D+ +T T R + + Sbjct: 64 LTQAIVDDVRARLKKPSLQVDAIPVTGTNRIPLLVNGTYDLECGSTTNTSARGKDVAFSI 123 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 ++ G + + GI + L+G ++ AG+T E L + HN+ I + Sbjct: 124 N--FFYAGTRLLTKRDSGIKNYPDLAGKTVASTAGSTNEKVLKKFAVEHNIDVQIISGKD 181 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R A D LY L+ + P+ ++ + + P A + + D + Sbjct: 182 YADALKLVETGRATALALDDVLLYGLRANSANPAALEVVAETLQVEPYACMVRKDDPAFK 241 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 +V T ++ + E + + P Sbjct: 242 RLVDATITRLMKSGE---FTALYKKWFESPIPP 271 >gi|213156960|ref|YP_002319005.1| ABC transporter, periplasmic binding protein [Acinetobacter baumannii AB0057] gi|301344841|ref|ZP_07225582.1| ABC transporter, periplasmic binding protein [Acinetobacter baumannii AB056] gi|301596930|ref|ZP_07241938.1| ABC transporter, periplasmic binding protein [Acinetobacter baumannii AB059] gi|213056120|gb|ACJ41022.1| ABC transporter, periplasmic binding protein [Acinetobacter baumannii AB0057] Length = 288 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 58/256 (22%), Positives = 111/256 (43%), Gaps = 15/256 (5%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 + S + IKK G ++ G+ + F + A G +GFDV+ + ++ + D +K++ Sbjct: 38 TTQTTSSIEQIKKNGVVRIGVFSDKPPFGYLDAQGKNQGFDVEIAKHIAKDLLGDENKVE 97 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 ++ A L++ ++DI+ N T R+ + A G + K I+ Sbjct: 98 FVLTEAANLVEYLKANKVDIIFANFTVTPERKEVVDFA--KPYLKVALGVVSPKSHPITD 155 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 V+QL ++ V GTT + +F + + +E+ E A + R A D Sbjct: 156 VAQLKDKTLLVNKGTTADS----FFTKTHPEIKLQKYEQNTETFDALKDGRGTALAHDN- 210 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI--- 256 L L + P+ V + ++ + +APA+ +GD E + W + + + G+ Sbjct: 211 -LLVLAWAKENPNYTVGITNLGEQDLIAPAVKKGDKELLD---WLNQDLEKLAKEGVIHQ 266 Query: 257 -TQKNINQVSKDTTNP 271 +K + V DT NP Sbjct: 267 AYEKTLKPVYGDTINP 282 >gi|308183276|ref|YP_003927403.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter pylori PeCan4] gi|308065461|gb|ADO07353.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter pylori PeCan4] Length = 277 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 62/273 (22%), Positives = 118/273 (43%), Gaps = 10/273 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M+ F V I + S L IK+RG LK G+ + F V + G ++G+D Sbjct: 9 MWGLFLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGYD 68 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V + ++ + D +KI+++P+ A R L++ ++DI+ N T RE + A Sbjct: 69 VVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKVVDFAK-- 126 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y ++ K I ++ +L + V GTT + YF + + FE+ Sbjct: 127 -PYMKVALGVISKDGVIKNIEELKDKELIVNKGTTADF----YFTKNYPNIKLLKFEQNT 181 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E A ++ A D + L A P + + + K +APAI +G+ + Sbjct: 182 ETFLALLNNKATALAHDNTLLLAWAKQ--HPEFKLGITSLGDKDVIAPAIKKGNPKLLEW 239 Query: 241 VSWTHYAMVTAEELG-ITQKNINQVSKDTTNPD 272 ++ ++++++ L ++ + V D P+ Sbjct: 240 LNNEIDSLISSDFLKEAYKETLEPVYGDGIKPE 272 >gi|325121936|gb|ADY81459.1| glutamate/aspartate transport protein (ABC superfamily, peri_bind) [Acinetobacter calcoaceticus PHEA-2] Length = 297 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 54/278 (19%), Positives = 99/278 (35%), Gaps = 13/278 (4%) Query: 1 MYKD---FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M + +S + L + TS A L IK G + G + V A G Sbjct: 1 MKRSATSLIISTVMLCTVGATSQIQAADTLAKIKSTGKIVIGHRESSDPISYVVA-GKPV 59 Query: 58 GFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ VD C ++ I + K++Y + + R L + ID+ T + R+ Sbjct: 60 GYAVDICNQFANDIKKELKMPGLKVEYKAVTSSTRIPELLAGNIDMECGTTTNSKQRQQQ 119 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 +G + Y + GI S++ L+G ++ GTT++ + K + Sbjct: 120 VGFSTN--YYATEVRMAVKANSGIKSLADLNGKAVVTTQGTTSDKYIKMNEKGQAVNVQN 177 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + + A + R A+ D + L L + P I+ ++S P + + Sbjct: 178 IYGKDHADSFAMMASGRAAAFVMDDNILAGLIAKSSTPKAFAIVGPVLSSEPYGIMLAKD 237 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 D ++ I T + G + P Sbjct: 238 DPKFKAIADRTVN---NLWKTGKMDALYKKWFLSPIPP 272 >gi|15645786|ref|NP_207963.1| glutamine ABC transporter, periplasmic glutamine-binding protein (glnH) [Helicobacter pylori 26695] gi|2314331|gb|AAD08218.1| glutamine ABC transporter, periplasmic glutamine-binding protein (glnH) [Helicobacter pylori 26695] Length = 277 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 64/273 (23%), Positives = 119/273 (43%), Gaps = 10/273 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M+ F V I + S L IK+RG LK G+ + F V + G ++G+D Sbjct: 9 MWGLFLVLIALVFNACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGYD 68 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V + ++ + D +KI+++P+ A R L++ ++DI+ N T RE + A Sbjct: 69 VVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKVVDFAK-- 126 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y ++ K I ++ +L + V GTT + YF + + FE+ Sbjct: 127 -PYMKVALGVVSKDGVIKNIEELKDKELIVNKGTTADF----YFTKNYPNIKLLKFEQNT 181 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E A ++ A D + L A T P + + + K +APAI +G+ + Sbjct: 182 ETFLALLNNKATALAHDNTLLLAW--TKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLEW 239 Query: 241 VSWTHYAMVTAEELG-ITQKNINQVSKDTTNPD 272 ++ ++++++ L Q+ + V D P+ Sbjct: 240 LNNEIDSLISSDFLKEAYQETLAPVYGDEIKPE 272 >gi|322378591|ref|ZP_08053031.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter suis HS1] gi|322380679|ref|ZP_08054824.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter suis HS5] gi|321146889|gb|EFX41644.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter suis HS5] gi|321148999|gb|EFX43459.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter suis HS1] Length = 278 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 67/277 (24%), Positives = 118/277 (42%), Gaps = 18/277 (6%) Query: 4 DFFVSILCLIILFFTSFSTNASI----LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 FF L+ L S + S L IK+RG L+ G+ + F V + G ++GF Sbjct: 6 KFFGVFSALVALSLVGCSDHKSKAQEGLSAIKERGILRVGVFSDKPPFGFVDSKGQYQGF 65 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DV + ++ + D KIQ++P+ A R L++ ++D++ N T RE + A Sbjct: 66 DVYIAKRMAKDLLGDAKKIQFIPVEAAARVEFLKANKVDVIMANFTKTREREAVVDFAK- 124 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGAS--ICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y ++ K I SV+ L + + V GTT + YF + H + ++ Sbjct: 125 --PYMKVALGVVSKGGVIKSVADLKSKNQPLIVNKGTTADF----YFSRNYPYIHLLKYD 178 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + E A + +R A D + L+A P V +P++ + +APA+ +GD Sbjct: 179 QNTETFLALKNNRGIALAHDNTLLFAWVKQ--NPEFKVGIPNLGEQDVIAPAVKKGDKAL 236 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 + W + + G ++ N K D+ Sbjct: 237 LD---WLDQEIDKLTKSGFMKEAYNTTLKPIYGNDIN 270 >gi|307704349|ref|ZP_07641266.1| ABC transporter substrate-binding protein [Streptococcus mitis SK597] gi|307622109|gb|EFO01129.1| ABC transporter substrate-binding protein [Streptococcus mitis SK597] Length = 264 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 61/266 (22%), Positives = 111/266 (41%), Gaps = 16/266 (6%) Query: 1 MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVK-ANGDWK 57 M K FF+S L + + + A + DI+KRG L G+ + F G + Sbjct: 1 MKKKFFLSALLISLFGLAATKPVQADTSVADIQKRGELVVGVKQDVPNFGYKDPKTGTYS 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G + D + ++ + K++Y+P+ A+ R L ++Q+D+ T R+ Sbjct: 61 GIETDLAKMVADEL---KVKVRYVPVTAQTRGPLLDNEQVDMDIATFTITEERKKLYNF- 116 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y D GF+++K I S+ L+G +I V G+ T+ + + K ++K+ + Sbjct: 117 -TSPYYTDASGFLVNKSAKIKSIEDLNGKTIGVAQGSITQRLITELGKKKDLKFKFVELG 175 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E+ + AHR DA++ D S L V+L D S + +TE Sbjct: 176 SYPELITSLHAHRIDAFSVDRSILSGYISK-----RTVLLDDSFKPSDYGIVTKKSNTEL 230 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQ 263 + + + G QK ++ Sbjct: 231 NDYLDNLVTKW---SKDGSLQKLYDR 253 >gi|207725321|ref|YP_002255717.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia solanacearum MolK2] gi|206590556|emb|CAQ37518.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia solanacearum MolK2] Length = 303 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 47/277 (16%), Positives = 101/277 (36%), Gaps = 12/277 (4%) Query: 7 VSILCLIILFFTSFSTNAS---ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 ++LC + + AS +L I+ G ++ F+ A+ G+ VD Sbjct: 11 AALLCSSLSIVAPGTALASATPVLDRIRDTGTVRIAYRESASPFSYSDADKKPIGYAVDL 70 Query: 64 CRALSSAI----FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 C + + K+QY+ + R + + D+ T RE +AF Sbjct: 71 CLRVVDKLRTELKRPDLKVQYVLVTPSSRIPTILEGKADLECSTTTNN--RERREQVAFT 128 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G ++ GI L ++ GTT+ + + + + Sbjct: 129 IPHYIAGIRMLVKTSSGIHKWDDLRDKTVVSTKGTTSIAEMRRLNDSRVLHMKVEEVKEH 188 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + A + + DA+ D LY+ + P ++ ++ D+++ P A + + D E+ + Sbjct: 189 ADAFAMVESGKADAFVMDDVQLYSFRANAKHPMDYTVVGDMMTVEPYAIMLSKSDPEFKH 248 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRF 276 V A++ + +K + + P+ + Sbjct: 249 SVDRAMTAIILDYD---AEKLYKKWFQQPIPPNSAKL 282 >gi|307248744|ref|ZP_07530757.1| hypothetical protein appser2_17100 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306854671|gb|EFM86861.1| hypothetical protein appser2_17100 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 298 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 59/278 (21%), Positives = 119/278 (42%), Gaps = 17/278 (6%) Query: 3 KDFFVSILCLIILFF------TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 K + + L ST + IK++G ++ G+ F V ANG Sbjct: 28 KTLLATAITAFALTACDNANNAQSSTAKDSVAQIKEKGVIRIGVFGDKPPFGYVDANGKS 87 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +GFDV+ + +++ + P K++++ A R L+S ++D++ N T R + + Sbjct: 88 QGFDVEIAKEIANDLLGSPDKMEFVLTEAANRVEYLKSNKVDLILANFTKTPER--AEVV 145 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F G + K I+ + QL G ++ V GTT + YF ++ + + + F Sbjct: 146 DFAAPYMNVALGVVSPKGALITDLKQLEGKTLLVNKGTTADA----YFTKNHPEINLLKF 201 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 ++ E A + R A D + ++A + P+ V + + +APA+ +G+ Sbjct: 202 DQNTETFDALKDGRGVALAHDNALVWAWAK--ENPTFDVAIGSVGPAEQIAPAVQKGNQA 259 Query: 237 WYNIVSWTHYAMVTAEELG-ITQKNINQVSKDTTNPDV 273 ++++ T +L +K + V D P++ Sbjct: 260 LLDVINKKIAEFKTNGKLKAAYEKTLVPVYGD--KPEL 295 >gi|329906185|ref|ZP_08274376.1| Glutamate Aspartate periplasmic binding protein precursor gltI [Oxalobacteraceae bacterium IMCC9480] gi|327547318|gb|EGF32154.1| Glutamate Aspartate periplasmic binding protein precursor gltI [Oxalobacteraceae bacterium IMCC9480] Length = 313 Score = 206 bits (525), Expect = 4e-51, Method: Composition-based stats. Identities = 40/276 (14%), Positives = 101/276 (36%), Gaps = 10/276 (3%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M + ++ ++ + + L IK G + G+ + F+ + ++G+ Sbjct: 1 MKLAKMMLVLIGSGLIASAAQAQETGTLKKIKDSGQITLGVRDSSIPFSYLDDKQSYQGY 60 Query: 60 DVDFCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +D C + + ++ P+ + R + + +D++ + + R+ + Sbjct: 61 SIDICMKIVTSIQKELGMTSLNVKLNPVTSATRIPLMANGTVDLVCGSATNNIERQKQVS 120 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 A P T+ + K I ++ + G S+ +GT+ L N+ + + Sbjct: 121 FA--PTTFVTANRLLAKKSSNIKTLDDMKGKSLVSTSGTSNLKQLVQLNGDRNLGMNVMT 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E R A+ D L +L ++ P+++ I + +S P + + D Sbjct: 179 AKDHAEAFLMVETGRAVAFGMDDILLASLAASSKSPADYSITTEALSTEPYGIMLRREDP 238 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + V A++ + G + + + P Sbjct: 239 AFKKSVD---TAVINLFKSGDINRIYAKWFQSPIPP 271 >gi|315612724|ref|ZP_07887635.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis ATCC 49296] gi|315314834|gb|EFU62875.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis ATCC 49296] Length = 273 Score = 206 bits (525), Expect = 4e-51, Method: Composition-based stats. Identities = 60/266 (22%), Positives = 108/266 (40%), Gaps = 16/266 (6%) Query: 1 MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVK-ANGDWK 57 M K FF+S L + + + A + DI+KRG L G+ + F G + Sbjct: 10 MKKKFFLSALLISLFSLAAAKPVQADTSVADIQKRGELVVGVKQDVPNFGYKDPKTGTYS 69 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G + D + ++ + KI+Y+P+ A+ R L ++Q+D+ T R+ Sbjct: 70 GIETDLAKMIADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKLYNF- 125 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y D GF+++K I S+ L+G +I V G+ T+ + + K + + + Sbjct: 126 -TSPYYTDASGFLVNKSANIKSIEDLNGKTIGVAQGSITQRLITELGKKKGLTFKFVELG 184 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E+ + AHR DA++ D S L +L D S + +TE Sbjct: 185 SYPELITSLHAHRIDAFSVDRSILSGYISK-----RTELLDDSFKPSDYGIVTKKSNTEL 239 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQ 263 + + + G QK ++ Sbjct: 240 NDYLDTLVTKW---SKNGSLQKLYDR 262 >gi|33591321|ref|NP_878965.1| amino-acid ABC transporter binding protein precursor [Bordetella pertussis Tohama I] gi|33570963|emb|CAE40435.1| amino-acid ABC transporter binding protein precursor [Bordetella pertussis Tohama I] Length = 299 Score = 206 bits (525), Expect = 4e-51, Method: Composition-based stats. Identities = 48/274 (17%), Positives = 98/274 (35%), Gaps = 9/274 (3%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K V L+ + ++ + L IK G + G + F+ + G+ + Sbjct: 1 MKISTVFFAALVGVAASAPAHAEGRLDKIKSSGTITIGHRDASIPFSYLDDKQKPIGYSM 60 Query: 62 DFCR----ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 + C A+ + + K+ +P+ + R + + +D++ + T+ R+ + A Sbjct: 61 EICEKAVEAIKAKLGMAQIKVNLVPVTSSTRIPLVANGTVDLVCGSATNTVERQQQVAFA 120 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 P T+ F K + + + G ++ AGT+ L + ++ I + Sbjct: 121 --PTTFVTATRFAAKKSSNLKKLDDMKGKTVVSTAGTSNIRWLTQANEKDSLDMRIIPTK 178 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 R A+ D L L T +P E +I D + P A + + D + Sbjct: 179 DHPAAMLTVANGRAAAFFMDDVLLAGLVATERKPDEWMISEDTYTVEPYALILPKDDPAF 238 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 +V T M+ G K + + P Sbjct: 239 KKVVDDTVTGMMR---DGSLAKLYKKWFESPIPP 269 >gi|317491137|ref|ZP_07949573.1| extracellular solute-binding protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920684|gb|EFV42007.1| extracellular solute-binding protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 304 Score = 206 bits (525), Expect = 4e-51, Method: Composition-based stats. Identities = 50/282 (17%), Positives = 99/282 (35%), Gaps = 17/282 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTN-------ASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M K +S+L + + + + + L IK G + G V F+ Sbjct: 3 MRK-LALSMLLIGMSSTMVHAADDQKSEATSDTLQKIKNNGVIVVGHRESSVPFSYYDNA 61 Query: 54 GDWKGFDVDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 G+ D+ + A+ + +++ LP+ ++ R LQ+ D +T Sbjct: 62 QKVVGYSQDYSNQIVDAVKKQLNMPNLQVKMLPITSQNRIPLLQNGTFDFECGSTTNNAE 121 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 R+ + G ++ K I L+G + V +GTT+E+ L + NM Sbjct: 122 RQQQAAF--SNTIFVVGTRLLVKKGGDIKDFKDLAGKPVVVTSGTTSEILLNKLNEKDNM 179 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 K I + + + R A+ D + L + +P + I+ S Sbjct: 180 KMRIISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDQWEIVGTPQSHEAYGCM 239 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + + D + ++ T T+ E K+ + P Sbjct: 240 LRKNDPAFKKLMDETIAKAQTSGE---AAKSYERWFNQPIPP 278 >gi|317014559|gb|ADU81995.1| amino acid ABC transporter [Helicobacter pylori Gambia94/24] Length = 277 Score = 206 bits (525), Expect = 4e-51, Method: Composition-based stats. Identities = 63/273 (23%), Positives = 119/273 (43%), Gaps = 10/273 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M+ F V I + S L IK+RG LK G+ + F V + G+++G+D Sbjct: 9 MWGLFLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGNYQGYD 68 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V + ++ + D +KI+++P+ A R L++ ++DI+ N T RE + A Sbjct: 69 VVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREAVVDFAK-- 126 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y ++ K I ++ +L + V GTT + YF + + FE+ Sbjct: 127 -PYMKVALGVISKDGVIKNIEELKDKELIVNKGTTADF----YFTKNYPNIKLLKFEQNT 181 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E A ++ A D + L A P + + + K +APAI +G+ + Sbjct: 182 ETFLALLNNKAIALAHDNTLLLAWVKQ--HPEFKLGITSLGDKDVIAPAIKKGNPKLLEW 239 Query: 241 VSWTHYAMVTAEELG-ITQKNINQVSKDTTNPD 272 ++ ++++++ L Q+ + V D P+ Sbjct: 240 LNNEIDSLISSDFLKEAYQETLEPVYGDGIKPE 272 >gi|295700116|ref|YP_003608009.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] gi|295439329|gb|ADG18498.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] Length = 300 Score = 206 bits (525), Expect = 4e-51, Method: Composition-based stats. Identities = 54/262 (20%), Positives = 97/262 (37%), Gaps = 10/262 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M + ++ L+ S A S L I++ G + G V F+ V AN D Sbjct: 1 MKVTNWSAVAVLVAATSVSPGAFAQDATSTLAKIQQSGVIAIGHRETSVPFSYVDANNDV 60 Query: 57 KGFDVDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 GF D C + A+ K++++P+ ++ R +Q+ +D+ T R+ Sbjct: 61 IGFSQDLCNKIIDAVKAKTKHPDLKVRFIPVTSQNRIPLVQNGTVDLECGVTTNLAARQS 120 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + + + K GI L+G ++ GTT+E L + M Sbjct: 121 QVTF--GDTFFVATTRLLTRKDSGIKDFPDLAGKTVVTNQGTTSERILRKMNEDKKMNMQ 178 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 I + E + R AY D L + +PS+ +I S + + Sbjct: 179 IISAKDYGEGRLTLESGRAVAYMMDDVLLAGTRTLTAKPSDWIITGTPQSSEAYGFMLRR 238 Query: 233 GDTEWYNIVSWTHYAMVTAEEL 254 D E+ +V T ++ E+ Sbjct: 239 DDPEFRKLVDDTLEQVMKGPEI 260 >gi|83745767|ref|ZP_00942824.1| Glutamate/aspartate-binding protein [Ralstonia solanacearum UW551] gi|207743682|ref|YP_002260074.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia solanacearum IPO1609] gi|83727457|gb|EAP74578.1| Glutamate/aspartate-binding protein [Ralstonia solanacearum UW551] gi|206595081|emb|CAQ62008.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia solanacearum IPO1609] Length = 303 Score = 206 bits (525), Expect = 4e-51, Method: Composition-based stats. Identities = 47/277 (16%), Positives = 101/277 (36%), Gaps = 12/277 (4%) Query: 7 VSILCLIILFFTSFSTNAS---ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 ++LC + + AS +L I+ G ++ F+ A+ G+ VD Sbjct: 11 AALLCSSLSIVAPGTALASATPVLDRIRDTGTVRIAYRESASPFSYSDADKKPIGYAVDL 70 Query: 64 CRALSSAI----FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 C + + K+QY+ + R + + D+ T RE +AF Sbjct: 71 CLRVVDKLRTELKRSDLKVQYVLVTPSSRIPTILEGKADLECSTTTNN--RERREQVAFT 128 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G ++ GI L ++ GTT+ + + + + Sbjct: 129 IPHYIAGIRMLVKTSSGIHKWDDLRDKTVVSTKGTTSIAEMRRLNDSRVLHMKVEEVKEH 188 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + A + + DA+ D LY+ + P ++ ++ D+++ P A + + D E+ + Sbjct: 189 ADAFAMVESGKADAFVMDDVQLYSFRANAKHPMDYTVVGDMMTVEPYAIMLSKSDPEFKH 248 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRF 276 V A++ + +K + + P+ + Sbjct: 249 SVDRAMTAIILDYD---AEKLYKKWFQQPIPPNSAKL 282 >gi|293608330|ref|ZP_06690633.1| predicted protein [Acinetobacter sp. SH024] gi|292828903|gb|EFF87265.1| predicted protein [Acinetobacter sp. SH024] Length = 297 Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats. Identities = 53/278 (19%), Positives = 99/278 (35%), Gaps = 13/278 (4%) Query: 1 MYKD---FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M + +S + L + TS A L IK G + G + V A G Sbjct: 1 MKRSATSLIISTVMLCTVGATSQIQAADTLAKIKSTGKIVIGHRESSDPISYVVA-GKPV 59 Query: 58 GFDVDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ VD C ++ I + K++Y + + R L + ID+ T + R+ Sbjct: 60 GYAVDICNQFANDIKKELKMPSLKVEYKAVTSSTRIPELLAGNIDMECGTTTNSKQRQQQ 119 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 +G + Y + GI S++ L+G ++ GTT++ + K + Sbjct: 120 VGFSTN--YYATEVRMAVKANSGIKSLADLNGKAVVTTQGTTSDKYIKMNEKGQAVNVQN 177 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + + A + R A+ D + L L + P I+ ++S P + + Sbjct: 178 IYGKDHADSFAMMASGRAAAFVMDDNILAGLIAKSSTPKAFAIVGPVLSSEPYGIMLAKD 237 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 D ++ + T + G + P Sbjct: 238 DPKFKAVADRTVN---NLWKTGKMDALYKKWFLSPIPP 272 >gi|307250985|ref|ZP_07532911.1| hypothetical protein appser4_17490 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307255603|ref|ZP_07537408.1| hypothetical protein appser9_18280 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307260054|ref|ZP_07541766.1| hypothetical protein appser11_18400 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306857013|gb|EFM89143.1| hypothetical protein appser4_17490 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306861452|gb|EFM93441.1| hypothetical protein appser9_18280 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306865890|gb|EFM97766.1| hypothetical protein appser11_18400 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 298 Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats. Identities = 58/278 (20%), Positives = 118/278 (42%), Gaps = 17/278 (6%) Query: 3 KDFFVSILCLIILFF------TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 K + + L ST + IK++G ++ G+ F V ANG Sbjct: 28 KTLLATAITAFALTACDNANNAQSSTAKDSVAQIKEKGVIRIGVFGDKPPFGYVDANGKS 87 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +GFDV+ + +++ + K++++ A R L+S ++D++ N T R + + Sbjct: 88 QGFDVEIAKEIANDLLGSSDKVEFVLTEAANRVEYLKSNKVDLILANFTKTPER--AEVV 145 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F G + K I+ + QL G ++ V GTT + YF ++ + + + F Sbjct: 146 DFAAPYMNVALGVVSPKGALITDLKQLEGKTLLVNKGTTADA----YFTKNHPEINLLKF 201 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 ++ E A + R A D + ++A + P+ V + + +APA+ +G+ Sbjct: 202 DQNTETFDALKDGRGVALAHDNALVWAWAK--ENPTFDVAIGSVGPAEQIAPAVQKGNQA 259 Query: 237 WYNIVSWTHYAMVTAEELG-ITQKNINQVSKDTTNPDV 273 ++++ T +L +K + V D P++ Sbjct: 260 LLDVINKEIAEFKTNGKLKAAYEKTLVPVYGD--KPEL 295 >gi|315587062|gb|ADU41443.1| ABC superfamily ATP binding cassette transporter, binding protein [Helicobacter pylori 35A] Length = 287 Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats. Identities = 62/269 (23%), Positives = 116/269 (43%), Gaps = 10/269 (3%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F V I + S L IK+RG LK G+ + F V + G ++G+DV Sbjct: 23 FLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGQYQGYDVVIA 82 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 + ++ + D +KI+++P+ A R L++ ++DI+ N T RE + A Y Sbjct: 83 KRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKVVDFAK---PYM 139 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K I ++ +L + V GTT + YF + + FE+ E Sbjct: 140 KVALGVVSKDGVIKNIEELKDKELIVNKGTTADF----YFTKNYPNIKLLKFEQNTETFL 195 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 A + A D + L A T P + + + K +APAI +G+ + ++ Sbjct: 196 ALLNDKAIALAHDNTLLLAW--TKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLEWLNNE 253 Query: 245 HYAMVTAEELG-ITQKNINQVSKDTTNPD 272 ++++++ L ++ + V D P+ Sbjct: 254 MDSLISSDFLKEAYKETLEPVYGDGIKPE 282 >gi|319765052|ref|YP_004128989.1| extracellular solute-binding protein family 3 [Alicycliphilus denitrificans BC] gi|317119613|gb|ADV02102.1| extracellular solute-binding protein family 3 [Alicycliphilus denitrificans BC] Length = 295 Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats. Identities = 55/276 (19%), Positives = 110/276 (39%), Gaps = 10/276 (3%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD----DPSKI 78 A L I G + V F+ + +G GF V+ A+ A+ K+ Sbjct: 22 QADTLKKIADTGKITVAYRESSVPFSYLAGSGGPVGFSVEITNAIVDAVKKQLNKPGLKV 81 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + ++ R LQ+ IDI +T +R + A ++ G ++ K GI Sbjct: 82 DMQAVTSQNRIPLLQNGTIDIECGSTTNNAVRGKDVQFAIN--YFYTGTRLLVKKNSGIK 139 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + + L+ + GTT + Y K +N+ + ++ + ++ A R +A+ D Sbjct: 140 NWADLARKKVSSTTGTTNAQVIRKYSKDNNLDFDIVLGKDHDDSMLLVDAGRAEAFAMDD 199 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 L+ LK P++ ++ D + P A + + D ++ +V+ +M+ + E + Sbjct: 200 ILLFGLKNNARNPADWDVVGDALQVEPYACMMRKDDPQFQKLVNGVIGSMMKSGE---FE 256 Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKD 294 K + P Q +G+ S + + L D Sbjct: 257 KLYTKWFMSPIPPKGQ-VIGLPMSQELKDNLTAQSD 291 >gi|294670245|ref|ZP_06735138.1| CjaA protein [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291307982|gb|EFE49225.1| CjaA protein [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 288 Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats. Identities = 61/244 (25%), Positives = 109/244 (44%), Gaps = 9/244 (3%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 IK++G ++ G+ F V ANG +GFDV+ + ++ + P KI+++ A R Sbjct: 48 IKEKGVIRIGVFGDKPPFGYVDANGKNQGFDVEIAKEMAKDLLGSPDKIEFVLTEAANRV 107 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 ++S ++D+L N T R ++ A G + K K I+ V+QL ++ Sbjct: 108 EYVRSGKVDVLLANFTQTPERAEAVDFAS--PYMKVALGVVSPKGKPITDVAQLKDQTLL 165 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V GTT + +F ++ + + F++ E A + R A D + L+A + Sbjct: 166 VNKGTTADA----FFTKNHPEVKLLKFDQNTETFDALKDGRGVALAHDNALLWAWAK--E 219 Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQKNINQVSKDT 268 P V + +I +APA+ +GD + V+ AM L +K + V D Sbjct: 220 NPDYEVAIGNIGPAESIAPAVKKGDKALLDWVNGEIAAMKKDGRLKAAYEKTLLPVYGDK 279 Query: 269 TNPD 272 P+ Sbjct: 280 VKPE 283 >gi|78066232|ref|YP_369001.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia sp. 383] gi|77966977|gb|ABB08357.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia sp. 383] Length = 271 Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats. Identities = 67/278 (24%), Positives = 99/278 (35%), Gaps = 14/278 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 M + + L L +A L DIKK G L+ F V G Sbjct: 1 MKINTLATWLVGAALITAGTVAHADRLDDIKKAGVLRVATFDSNPPFGYVDGKSNHIVGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD+ +AL+ + K+Q P N R L S ++D++ N T R + + Sbjct: 61 DVDYAKALADKLG---VKLQLQPTNPANRIPFLTSGKVDLVLANFTITDERAKQVDFS-- 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I YF + KK + S QLS + GTT E+TL + F + ++ Sbjct: 116 -IPYFSSGQQFLAKKGVLKSADQLSALRVGADKGTTNEITLREKFPKA----TIVAYDDT 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AA RA A T D L L + I IS + + +G+T Sbjct: 171 PFAFAALRAGNVQAITQDGPKLIGLLANVPDKQNYEIPAFTISNDYMGVGVPKGETRLLG 230 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277 V+ T E G + + TT + R Sbjct: 231 FVNDTLKG---LEANGRAGQIYDAWFGPTTKTPLTRIF 265 >gi|330827244|ref|YP_004390547.1| ABC transporter periplasmic subunit [Alicycliphilus denitrificans K601] gi|329312616|gb|AEB87031.1| ABC-type transporter, periplasmic subunit family 3 [Alicycliphilus denitrificans K601] Length = 295 Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats. Identities = 55/276 (19%), Positives = 109/276 (39%), Gaps = 10/276 (3%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD----DPSKI 78 A L I G + V F+ + +G GF V+ A+ A+ K+ Sbjct: 22 QADTLKKIADTGKITVAYRESSVPFSYLAGSGGPVGFSVEITNAIVDAVKKQLNKPGLKV 81 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + ++ R LQ+ IDI +T +R + A ++ G ++ K GI Sbjct: 82 DMQAVTSQNRIPLLQNGTIDIECGSTTNNAVRGKDVQFAIN--YFYTGTRLLVKKNSGIK 139 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + + L+ + GTT + Y K +N+ + ++ + ++ A R +A+ D Sbjct: 140 NWADLARKKVSSTTGTTNAQVIRKYSKDNNLDFDIVLGKDHDDSMLLVDAGRAEAFAMDD 199 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 L+ LK P++ ++ D + P A + + D ++ +V+ M+ + E + Sbjct: 200 ILLFGLKNNARNPADWDVVGDALQVEPYACMMRKDDPQFQKLVNGVIGGMMKSGE---FE 256 Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKD 294 K + P Q +G+ S + + L D Sbjct: 257 KLYTKWFMSPIPPKGQ-VIGLPMSQELKDNLTAQSD 291 >gi|82880399|gb|ABB92745.1| surface displayed FLIPE 600n sensor protein [synthetic construct] Length = 865 Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats. Identities = 45/249 (18%), Positives = 92/249 (36%), Gaps = 9/249 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQYLP 82 L I K G + G V F+ G+ D+ A+ A+ +K ++ +P Sbjct: 289 LDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVKLIP 348 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R LQ+ D +T + R+ + G + K I + Sbjct: 349 ITSQNRIPLLQNGTFDFECGSTTNNVERQKQAAF--SDTIFVVGTRLLTKKGGDIKDFAN 406 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L ++ V +GTT+E+ L + M I + + + R A+ D + L Sbjct: 407 LKDKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDALLA 466 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 + +P I+ S+ + + D ++ ++ T + T+ E +K + Sbjct: 467 GERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGE---AEKWFD 523 Query: 263 QVSKDTTNP 271 + K+ P Sbjct: 524 KWFKNPIPP 532 >gi|288905435|ref|YP_003430657.1| amino acid ABC transporter, substrate binding protein [Streptococcus gallolyticus UCN34] gi|306831516|ref|ZP_07464674.1| ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|288732161|emb|CBI13726.1| Putative amino acid ABC transporter, substrate binding protein [Streptococcus gallolyticus UCN34] gi|304426301|gb|EFM29415.1| ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 292 Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats. Identities = 68/258 (26%), Positives = 112/258 (43%), Gaps = 18/258 (6%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 + A L +IK+ G +K G+ + F V GD++G+DV F L+ + D + Sbjct: 39 GNTAKARTLDEIKESGTIKIGVFSDKKPFGYVDDKGDYQGYDVYFADRLAKDLGVD---V 95 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 +Y+ ++ R L S ++DI+ N T R + A G + K IS Sbjct: 96 EYVAVDPASRVEYLTSAKVDIILANFTVTDERAEQVDFAL--PYMKVALGVVSPSSKLIS 153 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 SV L G ++ V GTT E YF+ + K + + +++ E A R DA + D Sbjct: 154 SVDDLEGKTLIVGKGTTAET----YFEKNYPKVNLLKYDQYSEAYQALLDGRGDALSTDN 209 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 + + A L N V + + +APA+ +G+TE + W + + T E Sbjct: 210 TEVLAWALENK--GYEVGITSLGDTDTIAPAVQKGNTELLD---WINDEIKTLGEENFFH 264 Query: 259 KNINQ----VSKDTTNPD 272 K+ + V D NPD Sbjct: 265 KDYEETLEPVYGDAANPD 282 >gi|15612164|ref|NP_223816.1| amino acid ABC transporter [Helicobacter pylori J99] gi|4155688|gb|AAD06672.1| AMINO ACID ABC TRANSPORTER, BINDING PROTEIN PRECURSOR [Helicobacter pylori J99] Length = 277 Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats. Identities = 62/273 (22%), Positives = 119/273 (43%), Gaps = 10/273 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M+ F V I + S L IK+RG LK G+ + F V + G+++G+D Sbjct: 9 MWGLFLVLIALVFNACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGNYQGYD 68 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V + ++ + D +KI+++P+ A R L++ ++DI+ N T RE + A Sbjct: 69 VVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKVVDFAN-- 126 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y ++ K I ++ +L + V GTT + YF + + FE+ Sbjct: 127 -PYMKVALGVISKDGVIKNIEELKDKELIVNKGTTADF----YFTKNYPNIKLLKFEQNT 181 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E A ++ A D + L A P + + + K +APAI +G+ + Sbjct: 182 ETFLALLNNKAIALAHDNTLLLAWVKQ--HPEFKLGITSLGDKDVIAPAIKKGNPKLLEW 239 Query: 241 VSWTHYAMVTAEELG-ITQKNINQVSKDTTNPD 272 ++ ++++++ L Q+ + + D P+ Sbjct: 240 LNNEIDSLISSDFLKEAYQETLEPIYGDGIKPE 272 >gi|82880397|gb|ABB92744.1| glutamate sensor protein FLIPE-600n [synthetic construct] Length = 764 Score = 206 bits (524), Expect = 5e-51, Method: Composition-based stats. Identities = 45/249 (18%), Positives = 92/249 (36%), Gaps = 9/249 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQYLP 82 L I K G + G V F+ G+ D+ A+ A+ +K ++ +P Sbjct: 250 LDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVKLIP 309 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R LQ+ D +T + R+ + G + K I + Sbjct: 310 ITSQNRIPLLQNGTFDFECGSTTNNVERQKQAAF--SDTIFVVGTRLLTKKGGDIKDFAN 367 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L ++ V +GTT+E+ L + M I + + + R A+ D + L Sbjct: 368 LKDKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDALLA 427 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 + +P I+ S+ + + D ++ ++ T + T+ E +K + Sbjct: 428 GERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGE---AEKWFD 484 Query: 263 QVSKDTTNP 271 + K+ P Sbjct: 485 KWFKNPIPP 493 >gi|25010745|ref|NP_735140.1| hypothetical protein gbs0690 [Streptococcus agalactiae NEM316] gi|77410777|ref|ZP_00787135.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus agalactiae CJB111] gi|23095099|emb|CAD46334.1| unknown [Streptococcus agalactiae NEM316] gi|77163156|gb|EAO74109.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus agalactiae CJB111] gi|319744751|gb|EFV97093.1| polar amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus agalactiae ATCC 13813] Length = 266 Score = 206 bits (524), Expect = 5e-51, Method: Composition-based stats. Identities = 66/262 (25%), Positives = 107/262 (40%), Gaps = 14/262 (5%) Query: 2 YKDFFVSIL--CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKG 58 K + +L I L F ST+A+ L +IKK G LK G+ + F A ++G Sbjct: 4 RKRLTLYLLSCIFIFLLFYPNSTSANQLSEIKKSGVLKVGVKQDVPNFGYYNAETNQYEG 63 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 ++D + ++ ++ P ++P A+ R + + QIDIL T R+ Sbjct: 64 MEIDIAKKIAKSLGVKPV---FVPTTAQTREPLMDNGQIDILIATYTITPERKA--NYNI 118 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y D GF++ K I ++ +L G I V G TT+ L Y K H +K+ Sbjct: 119 SKAYYHDEIGFLVRKNSHIKTIKELDGKHIGVAQGATTKGNLEKYAKEHKLKFSYAQLGS 178 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E+ + A+R DA++ D S L + IL + + A + D Sbjct: 179 FPELAISLYANRIDAFSVDKSILSGYLSPHTT-----ILKEGFNTQEYGIATSKQDKVLI 233 Query: 239 NIVSWTHYAMVTAEELG-ITQK 259 V+ + L I QK Sbjct: 234 PYVNKLLVSWEKDGSLKHIYQK 255 >gi|227114975|ref|ZP_03828631.1| glutamate and aspartate transporter subunit [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 298 Score = 206 bits (524), Expect = 5e-51, Method: Composition-based stats. Identities = 47/275 (17%), Positives = 94/275 (34%), Gaps = 9/275 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L A L +K G + G V F+ G+ Sbjct: 3 MRKLALSLLLLGTAASVAQAEDLAGTLKKVKDNGVIVIGHRESSVPFSYYDNTQKVVGYS 62 Query: 61 VDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 + + A+ +++ LP+ ++ R LQ+ D +T L R+ Sbjct: 63 QAYSDKIVEAVKKKLDAPNLQVKLLPITSQNRIPLLQNGTFDFECGSTTNNLERQKQAAF 122 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + G + K G+ L+G ++ V +GTT+E+ L + +K I Sbjct: 123 --SNTIFVVGTRLLTKKDSGVKDFPDLAGKTVVVTSGTTSEVLLNKLNEEKQLKMRIISA 180 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + + R A+ D + L + + I+ S+ + + D + Sbjct: 181 KDHGDSFRTLESGRAVAFMMDDALLAGERAKAKNADQWDIVGKAQSEEAYGCMLRKDDPQ 240 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + +V T + + E +K ++ K P Sbjct: 241 FKKLVDDTIAEVQASGE---AEKWFDRWFKQPIPP 272 >gi|134295676|ref|YP_001119411.1| extracellular solute-binding protein [Burkholderia vietnamiensis G4] gi|134138833|gb|ABO54576.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia vietnamiensis G4] Length = 276 Score = 206 bits (524), Expect = 5e-51, Method: Composition-based stats. Identities = 68/278 (24%), Positives = 99/278 (35%), Gaps = 14/278 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 M + L L +A L DIKK G L+ F V A G Sbjct: 6 MKFHTLATWLVGAALVTAGTLAHADRLDDIKKAGVLRVATFDSNPPFGFVDAKSHHIVGL 65 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD+ +AL+ + K+Q P N R L S ++D++ N T R + + Sbjct: 66 DVDYAKALADKLG---VKLQLQPTNPANRIPFLTSGKVDLVLANFTITDERAKQVDFS-- 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I YF + KK + S QL+G + GTT E+TL D F + ++ Sbjct: 121 -IPYFSSGQQFLAKKGVLKSADQLNGLRVGADKGTTNEITLRDKFPGA----TIVAYDDT 175 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AA RA A T D L L + I IS + + +G+ Sbjct: 176 PFAFAALRAGNVQAITQDGPKLIGLLANVPDKQNYEIPAFTISNDYMGVGVPKGEARLLG 235 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277 V+ T E G + + TT + R Sbjct: 236 FVNDTLKG---LEANGRAAQIYDAWFGPTTRTPLTRIF 270 >gi|77408339|ref|ZP_00785080.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus agalactiae COH1] gi|77173020|gb|EAO76148.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus agalactiae COH1] Length = 266 Score = 206 bits (524), Expect = 5e-51, Method: Composition-based stats. Identities = 66/262 (25%), Positives = 108/262 (41%), Gaps = 14/262 (5%) Query: 2 YKDFFVSIL--CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKG 58 K + +L I L F ST+A+ L +IKK G LK G+ + F A ++G Sbjct: 4 RKRLTLYLLSXIFIFLLFYPNSTSANQLSEIKKSGVLKVGVKQDVPNFGYYNAETNQYEG 63 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 ++D + ++ ++ P ++P A+ R + + QIDIL T R+ Sbjct: 64 MEIDIAKKIAKSLGVKPV---FVPTTAQTREPLMDNGQIDILIATYTITPERKA--NYNI 118 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y D GF++ K I ++ +L G I V G TT++ L Y K H +K+ Sbjct: 119 SKAYYHDEIGFLVRKNSHIKTIKELDGKHIGVAQGATTKVNLEKYAKEHKLKFSYAQLGS 178 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E+ + A+R DA++ D S L + IL + + A + D Sbjct: 179 FPELAISLYANRIDAFSVDKSILSGYLSPHTT-----ILKEGFNTQEYGIATSKQDKVLI 233 Query: 239 NIVSWTHYAMVTAEELG-ITQK 259 V+ + L I QK Sbjct: 234 PYVNKLLVSWEKDGSLKHIYQK 255 >gi|300704696|ref|YP_003746299.1| glutamate/aspartate ABC transport protein high affinity periplasmic solute-binding protein [Ralstonia solanacearum CFBP2957] gi|299072360|emb|CBJ43698.1| glutamate/aspartate transport protein (ABC superfamily, peri_bind) high affinity periplasmic solute-binding protein [Ralstonia solanacearum CFBP2957] Length = 303 Score = 206 bits (524), Expect = 5e-51, Method: Composition-based stats. Identities = 46/277 (16%), Positives = 100/277 (36%), Gaps = 12/277 (4%) Query: 7 VSILCLIILFFTSFSTNAS---ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 ++LC + + AS +L I+ G ++ F+ A+ G+ VD Sbjct: 11 AALLCSSLSIVAPGTALASATPVLDRIRDTGTVRIAYRESASPFSYSDADKKPIGYAVDL 70 Query: 64 CRALSSAI----FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 C + + K+QY+ + R + + D+ T RE +AF Sbjct: 71 CLRVVDKLRTELKRPDLKVQYVQVTPSSRIPTILEGKADLECSTTTNN--RERREQVAFT 128 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G ++ GI L ++ GTT+ + + + + Sbjct: 129 IPHYIAGIRMLVKTSSGIHKWDDLRDKTVVSTKGTTSIAEMRRLNDSRVLHMKVEEVKEH 188 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + A + + DA+ D LY+ + P ++ ++ D+++ P A + + D E+ Sbjct: 189 ADAFAMVESGKADAFVMDDVQLYSFRANAKHPMDYTVVGDMMTVEPYAIMLSKSDPEFKR 248 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRF 276 V +++ + +K + + P+ + Sbjct: 249 TVDRAMTSIILDYD---AEKFYKKWFQQPIPPNSAKL 282 >gi|146311435|ref|YP_001176509.1| extracellular solute-binding protein [Enterobacter sp. 638] gi|145318311|gb|ABP60458.1| amino acid ABC transporter substrate-binding protein, PAAT family [Enterobacter sp. 638] Length = 276 Score = 206 bits (524), Expect = 5e-51, Method: Composition-based stats. Identities = 65/277 (23%), Positives = 107/277 (38%), Gaps = 15/277 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFD 60 Y+ +++ L S A L DIK G +K F + D G+D Sbjct: 8 YQQLVLALGLLTAGGILSTPAQADQLADIKAAGVVKVATFDANPPFGSIDPKTHDIVGYD 67 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDF +AL+ + K++ + N R LQS + D++ + T R + Sbjct: 68 VDFAKALAKTLG---VKLELVATNPANRIPLLQSGKADLIVADITITPERAQVIDF--ST 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + GQ F++ K + S A I GTT E L F + + ++ + Sbjct: 123 PYFVTGQQFLVPVKSADK-LDDYSKARIGAVKGTTGEQALHQRFP----QSRVLSYDDIP 177 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A R A T D + L L + ILPD++SK + + +G+T N+ Sbjct: 178 LALTALRNGNVQAITQDSTILAGLLSQAPDKANFKILPDLLSKEEIGVGVKKGETALLNV 237 Query: 241 VSWTHYAMVTAEELGITQKNIN-QVSKDTTNPDVQRF 276 V+ +V E+ G K + T +P + F Sbjct: 238 VN---TELVNLEKNGEAAKIYDVWFGPQTQSPQPRAF 271 >gi|152974368|ref|YP_001373885.1| extracellular solute-binding protein [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152023120|gb|ABS20890.1| extracellular solute-binding protein family 3 [Bacillus cytotoxicus NVH 391-98] Length = 275 Score = 206 bits (524), Expect = 5e-51, Method: Composition-based stats. Identities = 60/277 (21%), Positives = 108/277 (38%), Gaps = 23/277 (8%) Query: 1 MYKDF-FVSILCLIILFFTS----------FSTNASILGDIKKRGFLKCGINTGLVGFAE 49 M K F + +CL L ST+ ++ IKKRG L G+ F Sbjct: 4 MKKWFTLIVFVCLFTLIVAGCGNKQEEAKETSTSGGVVEQIKKRGKLVVGVKNDTNLFGL 63 Query: 50 VK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 KNPSTGQVEGFDVDMAKALAKRILGDEKKLELKEVTSKTRIPMLKNGDIDAIIATMTITE 123 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAH 167 R+ + + + GQ ++ K I S+ + G + G+T+ + Sbjct: 124 ERKKEVDF--SDVYFKAGQSLLVKKGSDIKSIDDVKKGVKVLAVKGSTSTQNVRQKAPEA 181 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 182 ----TVLEFENYSEAFTALKAGQGDVLTTDNAILYGMAKQDAN---YEVVGKIFTNEPYG 234 Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQ 263 A+ +G T+ ++ + E + +K I + Sbjct: 235 IAVQKGATDLTKEINDLLKEIKENGEYDKLYEKWIGE 271 >gi|46200782|ref|ZP_00056492.2| COG0834: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Magnetospirillum magnetotacticum MS-1] Length = 294 Score = 206 bits (524), Expect = 5e-51, Method: Composition-based stats. Identities = 54/275 (19%), Positives = 108/275 (39%), Gaps = 12/275 (4%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA----IFDDPSKIQY 80 L +K+ G + G+ + + G G+ VD CR ++ A + +++ Sbjct: 17 PTLDKVKRTGSIVLGVRETSYPLSYLDQTGQPIGYHVDICRRIAEAVKTQLGLSSLEVRT 76 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + +K R + ID+ +T R+ + A P TY + K I+ + Sbjct: 77 EVVTSKTRIPKMVDGAIDLECGSTTNNAARQTQVAFA--PTTYVASVRIAVKKASRITKL 134 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 +QL G ++ AG+T+ L + ++ + E + + A+ D + Sbjct: 135 AQLDGKAVVTTAGSTSVQLLKARVQGRDINVIEVFGNDHAESFKMLESDQAAAFVMDDNL 194 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQK 259 L L ++ P ++ IL ++ P+A + + D + +V T AM+T+ E+G + K Sbjct: 195 LAGLIASSSAPKDYEILAQTLNTEPIAIMLRKNDPAFKALVDQTVKAMMTSGEVGRLYAK 254 Query: 260 NINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKD 294 + P + L S + L D Sbjct: 255 WF-----LSPIPPMNAALAFPMSPVLAGLLKYPGD 284 >gi|115351568|ref|YP_773407.1| extracellular solute-binding protein [Burkholderia ambifaria AMMD] gi|115281556|gb|ABI87073.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia ambifaria AMMD] Length = 271 Score = 206 bits (524), Expect = 5e-51, Method: Composition-based stats. Identities = 65/278 (23%), Positives = 99/278 (35%), Gaps = 14/278 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 M + L L +A L DI+K G L+ F V A G Sbjct: 1 MKIHTLATWLVGAALVTAGTVAHADRLDDIRKAGVLRVATFDSNPPFGYVDAKSNHIVGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD+ +AL+ + K+Q P N R L S ++D++ N T R + + Sbjct: 61 DVDYAKALADKLG---VKLQLQPTNPANRIPFLTSGKVDLVLANFTITDERAKQVDFS-- 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I YF + KK + S QL+G + GTT E+TL + + + ++ Sbjct: 116 -IPYFSSGQQFLAKKGVLKSADQLNGLRVGADKGTTNEITLREKYPKA----TIVAYDDT 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AA RA A T D L L + I IS + + +G+T Sbjct: 171 PFAFAALRAGNVQAITQDGPKLIGLLANVPDKQNYEIPAFTISNDYMGVGVPKGETRLLG 230 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277 V+ T E G + + T + R Sbjct: 231 FVNDTLKG---LEANGRAGQIYDAWFGPATKTPLTRIF 265 >gi|253687586|ref|YP_003016776.1| extracellular solute-binding protein family 3 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251754164|gb|ACT12240.1| extracellular solute-binding protein family 3 [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 298 Score = 205 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 49/275 (17%), Positives = 95/275 (34%), Gaps = 9/275 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L A L +K G + G V F+ G+ Sbjct: 3 MRKLALSLLLLGTAASVAQAEDLAGTLKKVKDNGVIVIGHRESSVPFSYYDNTQKVVGYS 62 Query: 61 VDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 + + A+ +++ LP+ ++ R LQ+ D +T L R+ Sbjct: 63 QAYSDKIVEAVKKKLDAPNLQVKLLPITSQNRIPLLQNGTFDFECGSTTNNLERQKQAAF 122 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + G + K G+ L+G ++ V +GTT+E+ L + MK I Sbjct: 123 --SNTIFVVGTRLLTKKDSGVKDFPDLAGKTVVVTSGTTSEVLLNKLNEEKQMKMRIISA 180 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + + R A+ D + L + + I+ S+ + + D + Sbjct: 181 KDHGDSFRTLESGRAVAFMMDDALLAGERAKAKSADQWDIVGKAQSEEAYGCMLRKDDPQ 240 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + +V T + T+ E +K ++ K P Sbjct: 241 FKKLVDDTIAEVQTSGE---AEKWFDRWFKQPIPP 272 >gi|318604771|emb|CBY26269.1| glutamate Aspartate periplasmic binding protein precursor GltI [Yersinia enterocolitica subsp. palearctica Y11] Length = 304 Score = 205 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 95/254 (37%), Gaps = 9/254 (3%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS----K 77 + L IK G + G V F+ G+ D+ + AI + + Sbjct: 30 ASVDTLKKIKDNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNLIVDAIKKKLNAPDLQ 89 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++ +P+ ++ R LQ+ D +T L R+ + G + K + Sbjct: 90 VKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQQQAAF--SNTIFVVGTRLLTKKGSEV 147 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 +L+G + V +GTT+E+ L + M I + + + R A+ D Sbjct: 148 KDFKELAGKPVVVTSGTTSEVLLNKLNEKDKMNMRIISAKDHGDSFRTLESGRAVAFMMD 207 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 + L + +P + I+ S+ + + D + ++ T TA+ G+ Sbjct: 208 DALLAGERAKAKKPDQWDIVGTPQSQEAYGCMLRKDDPAFKTLLDETI---ATAQTSGVA 264 Query: 258 QKNINQVSKDTTNP 271 +K+ ++ K+ P Sbjct: 265 EKSFDRWFKNPIPP 278 >gi|307637843|gb|ADN80293.1| Aminoacid ABC transporter binding protein [Helicobacter pylori 908] Length = 277 Score = 205 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 62/273 (22%), Positives = 119/273 (43%), Gaps = 10/273 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M+ F V I + S L IK+RG LK G+ + F V + G+++G+D Sbjct: 9 MWGLFLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGNYQGYD 68 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V + ++ + D +KI+++P+ A R L++ ++DI+ N T RE + A Sbjct: 69 VVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKVVDFAN-- 126 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y ++ K I ++ +L + V GTT + YF + + FE+ Sbjct: 127 -PYMKVALGVISKDGIIKNIEELKNKELIVNKGTTADF----YFTKNYPNIKLLKFEQNT 181 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E A ++ A D + L A P + + + K +APAI +G+ + Sbjct: 182 ETFLALLNNKATALAHDNTLLLAWVKQ--HPEFKLGITSLGDKDVIAPAIKKGNPKLLEW 239 Query: 241 VSWTHYAMVTAEELG-ITQKNINQVSKDTTNPD 272 ++ ++++++ L ++ + V D P+ Sbjct: 240 LNNEIDSLISSDFLKEAYKETLEPVYGDGIKPE 272 >gi|331266846|ref|YP_004326476.1| ABC transporter, substrate-binding protein,polar amino acid transport system; glutamine transport,putative [Streptococcus oralis Uo5] gi|326683518|emb|CBZ01136.1| ABC transporter, substrate-binding protein,polar amino acid transport system; glutamine transport,putative [Streptococcus oralis Uo5] Length = 264 Score = 205 bits (523), Expect = 6e-51, Method: Composition-based stats. Identities = 59/266 (22%), Positives = 108/266 (40%), Gaps = 16/266 (6%) Query: 1 MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVK-ANGDWK 57 M K FF+S L + + + A + DI+KRG L G+ + F G + Sbjct: 1 MKKKFFLSALLISLFGLAAAKPVQADTSVADIQKRGELVVGVKQDVPNFGYKDPKTGTYS 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G + D + ++ + K++Y+P+ A+ R L ++Q+D+ T R+ Sbjct: 61 GIETDLAKMIADEL---KVKVRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKLYNF- 116 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y D GF+++K I S+ L+G +I V G+ T+ + + K + + + Sbjct: 117 -TSPYYTDASGFLVNKSANIKSIEDLNGKTIGVAQGSITQRLITELGKKKGLTFKFVELG 175 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E+ + AHR DA++ D S L +L D S + +TE Sbjct: 176 SYPELITSLHAHRIDAFSVDRSILSGYISK-----RTELLEDSFKPSDYGIVTKKSNTEL 230 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQ 263 + + + G QK ++ Sbjct: 231 NDYLDTLVTKW---SKDGSLQKLYDR 253 >gi|194099714|ref|YP_002002849.1| Putative ABC transporter, periplasmic binding protein, amino acid [Neisseria gonorrhoeae NCCP11945] gi|193935004|gb|ACF30828.1| Putative ABC transporter, periplasmic binding protein, amino acid [Neisseria gonorrhoeae NCCP11945] Length = 284 Score = 205 bits (523), Expect = 6e-51, Method: Composition-based stats. Identities = 62/280 (22%), Positives = 120/280 (42%), Gaps = 18/280 (6%) Query: 3 KDFFVSILCLIILFF---------TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 K S + L +S S+ A+ + IK++G ++ G+ F V AN Sbjct: 8 KALLASAAIAVGLTACGGGSGDAQSSQSSGAATVAAIKEKGVIRIGVFGDKPPFGYVDAN 67 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G +GFDV+ + L+ + P K++++ A R ++S ++D++ N T R + Sbjct: 68 GKNQGFDVEIAKDLAKDLLGSPDKVEFVLTEAANRVEYVRSGKVDLILANFTQTPERAEA 127 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + A G + K K I+ ++QL ++ V GT + +F + + Sbjct: 128 VDFAD--PYMKVALGVVSPKNKPITDMAQLKDQTLLVNKGTAADA----FFTKSHPEVKL 181 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + F++ E A + R A D + L+A + P+ V + ++ +APA+ +G Sbjct: 182 LKFDQNTETFDALKDGRGVALAHDNALLWAWAK--ENPNFEVAIGNLGPAEFIAPAVQKG 239 Query: 234 DTEWYNIVSWTHYAMVTAEELG-ITQKNINQVSKDTTNPD 272 + + N V+ AM L +K + V + P+ Sbjct: 240 NADLLNWVNGEIAAMKKDGRLKAAYEKTLLPVYGEKVKPE 279 >gi|194292188|ref|YP_002008095.1| glutamate/aspartate transport protein (ABC superfamily, peri_bind) high affinity periplasmic solute-binding protein [Cupriavidus taiwanensis LMG 19424] gi|193226092|emb|CAQ72039.1| glutamate/aspartate transport protein (ABC superfamily, peri_bind) high affinity periplasmic solute-binding protein [Cupriavidus taiwanensis LMG 19424] Length = 281 Score = 205 bits (523), Expect = 6e-51, Method: Composition-based stats. Identities = 50/251 (19%), Positives = 95/251 (37%), Gaps = 8/251 (3%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA--- 70 +L + +L I+ G + G + F+ G G+ VD C + A Sbjct: 1 MLAPAQARAQSPVLDKIRDAGTIVLGYRESALPFSFADDKGQPAGYAVDLCLRAAEAARQ 60 Query: 71 -IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 + K++++PL + R A+ + +D+ +L R+ + + Y Sbjct: 61 KLGLKDLKVRWMPLTPQNRIPAVVNGLVDLDCAPNTNSLERQKQVAFSVS--HYVSTVRM 118 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 ++ GI S L G ++ AG+T + + + YH + + E + Sbjct: 119 LVRADSGIRSFGDLRGKTVVTSAGSTGDRHVRRF--KGQYGYHDVYAKDHGESFLLLESG 176 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 R A+ D L L+ PS++VI+ +S A + + D EW +V T Sbjct: 177 RAQAFVMDDVLLAGLRARAKDPSQYVIVGPALSVEQNALMLSKADPEWKRLVDQTLATTF 236 Query: 250 TAEELGITQKN 260 E+ Q+ Sbjct: 237 AGPEVVALQQR 247 >gi|257062232|ref|YP_003140120.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 8802] gi|256592398|gb|ACV03285.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 8802] Length = 299 Score = 205 bits (523), Expect = 6e-51, Method: Composition-based stats. Identities = 60/282 (21%), Positives = 114/282 (40%), Gaps = 17/282 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + IL L++ S+ A +L IK+ G + G + F + G W G+ Sbjct: 1 MGKKVTLFILTLVLATTGQASSWAGQVLEKIKQTGVINAGTRKDAIPFGYINEQGKWVGY 60 Query: 60 DVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +D + + P K+ + + ++RF ++ +DI +T +T R ++ Sbjct: 61 SLDVLEIIRKDVEKQLGKPIKLNLVEVTTQDRFNKIKDGSLDIECASTTFTWERNKTVDF 120 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + G ++ K +GI SV L+G + V TT E + A ++ Sbjct: 121 TVS--YFASGTKVLVKKDRGIGSVETLAGLKVGVIPKTTNEQAIKIQQPAAQ----LVMV 174 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDT 235 + +E A DA+ D L LK + P+ ++P+ + A I Q + Sbjct: 175 KDRKEGLQKLEAGTIDAFASDGILLEGLKKESSNPNNLEVVPEFPYAYESYACMIPQDQS 234 Query: 236 EWYNIVSWTHYAMVTA------EELGITQKNINQVSKDTTNP 271 +W N+V+++ + E + I +K + + T P Sbjct: 235 QWRNMVNYSLVKFMEGIVSDQPEPVAIYEKWFGEENGVTPYP 276 >gi|325996441|gb|ADZ51846.1| Aminoacid ABC transporter, binding protein precursor [Helicobacter pylori 2018] gi|325998030|gb|ADZ50238.1| Amino acid ABC transporter binding protein [Helicobacter pylori 2017] Length = 277 Score = 205 bits (523), Expect = 6e-51, Method: Composition-based stats. Identities = 62/273 (22%), Positives = 119/273 (43%), Gaps = 10/273 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M+ F V I + S L IK+RG LK G+ + F V + G+++G+D Sbjct: 9 MWGLFLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGNYQGYD 68 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V + ++ + D +KI+++P+ A R L++ ++DI+ N T RE + A Sbjct: 69 VVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKVVDFAN-- 126 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y ++ K I ++ +L + V GTT + YF + + FE+ Sbjct: 127 -PYMKVALGVISKDGIIKNIEELKDKELIVNKGTTADF----YFTKNYPNIKLLKFEQNT 181 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E A ++ A D + L A P + + + K +APAI +G+ + Sbjct: 182 ETFLALLNNKATALAHDNTLLLAWVKQ--HPEFKLGITSLGDKDVIAPAIKKGNPKLLEW 239 Query: 241 VSWTHYAMVTAEELG-ITQKNINQVSKDTTNPD 272 ++ ++++++ L ++ + V D P+ Sbjct: 240 LNNEIDSLISSDFLKEAYKETLEPVYGDGIKPE 272 >gi|303253108|ref|ZP_07339257.1| putative ABC transporter, periplasmic binding protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302647790|gb|EFL77997.1| putative ABC transporter, periplasmic binding protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226] Length = 278 Score = 205 bits (523), Expect = 6e-51, Method: Composition-based stats. Identities = 59/278 (21%), Positives = 119/278 (42%), Gaps = 17/278 (6%) Query: 3 KDFFVSILCLIILFF------TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 K + + L ST + IK++G ++ G+ F V ANG Sbjct: 8 KTLLATAITAFALTACDNANNAQSSTAKDSVAQIKEKGVIRIGVFGDKPPFGYVDANGKS 67 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +GFDV+ + +++ + P K++++ A R L+S ++D++ N T R + + Sbjct: 68 QGFDVEIAKEIANDLLGSPDKMEFVLTEAANRVEYLKSNKVDLILANFTKTPER--AEVV 125 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F G + K I+ + QL G ++ V GTT + YF ++ + + + F Sbjct: 126 DFAAPYMNVALGVVSPKGALITDLKQLEGKTLLVNKGTTADA----YFTKNHPEINLLKF 181 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 ++ E A + R A D + ++A + P+ V + + +APA+ +G+ Sbjct: 182 DQNTETFDALKDGRGVALAHDNALVWAWAK--ENPTFDVAIGSVGPAEQIAPAVQKGNQA 239 Query: 237 WYNIVSWTHYAMVTAEELG-ITQKNINQVSKDTTNPDV 273 ++++ T +L +K + V D P++ Sbjct: 240 LLDVINKKIAEFKTNGKLKAAYEKTLVPVYGD--KPEL 275 >gi|262278835|ref|ZP_06056620.1| glutamate/aspartate transporter [Acinetobacter calcoaceticus RUH2202] gi|262259186|gb|EEY77919.1| glutamate/aspartate transporter [Acinetobacter calcoaceticus RUH2202] Length = 297 Score = 205 bits (523), Expect = 6e-51, Method: Composition-based stats. Identities = 56/278 (20%), Positives = 100/278 (35%), Gaps = 13/278 (4%) Query: 1 MYKD---FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M + +S L + TS A L IK G + G + V A G Sbjct: 1 MKRSATSLIISTFMLCTVGATSQIQAADTLAKIKSSGKIVIGHRESSDPISYVVA-GKPV 59 Query: 58 GFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ VD C ++ I + K++Y + + R L + ID+ T + R+ Sbjct: 60 GYAVDICNQFANDIKKELKMPGLKVEYKAVTSSTRIPELLAGNIDMECGTTTNSKQRQEQ 119 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 +G + Y + GI S++ L+G ++ GTT++ + K + Sbjct: 120 VGFSTN--YYATEVRMAVKANSGIKSLADLNGKAVVTTQGTTSDKYIKMNEKGQALTIQN 177 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + + A + R A+ D + L L + P I+ ++S P + +G Sbjct: 178 IYGKDHSDSFAMMASGRAAAFVMDDNILAGLVAKSSTPKAFAIVGPVLSSEPYGIMLAKG 237 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 DT++ I T + G + P Sbjct: 238 DTKFKAIADRTVN---NLWKTGQMDALYKKWFLSPIPP 272 >gi|239814179|ref|YP_002943089.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] gi|239800756|gb|ACS17823.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] Length = 306 Score = 205 bits (523), Expect = 6e-51, Method: Composition-based stats. Identities = 50/233 (21%), Positives = 102/233 (43%), Gaps = 5/233 (2%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK---IQYL 81 L +++ G + G V F+ + A + G+ ++ CR L +AI + +K I+++ Sbjct: 38 GTLAKVRESGTIAIGYRESSVPFSFLNARQEPVGYSIELCRELVTAIEEAVNKSLAIKWV 97 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 P+ + R A++ +D+ +T L R+ + P + G ++ K I S Sbjct: 98 PVTSDSRIDAVERGTVDLECGSTTSNLERQKRVSF--SPTIFVSGTKVLVKKGSPIKSFR 155 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L+G + V AGTT E TL + + + V + ++ + DA+ D L Sbjct: 156 DLAGKRVAVTAGTTNEKTLRELSQKFRLGIDLRVARDHADSFGLVKSGQADAFATDDVLL 215 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 Y L + +++ ++ D +S P +GD + +++ T + E+ Sbjct: 216 YGLIARDAAKAQYEVVGDYLSYDPYGIMYRKGDAQLAKVINDTFQVLAQDGEI 268 >gi|321312269|ref|YP_004204556.1| glutamine ABC transporter glutamine-binding lipoprotein [Bacillus subtilis BSn5] gi|320018543|gb|ADV93529.1| glutamine ABC transporter (glutamine-binding lipoprotein) [Bacillus subtilis BSn5] Length = 273 Score = 205 bits (523), Expect = 6e-51, Method: Composition-based stats. Identities = 54/278 (19%), Positives = 108/278 (38%), Gaps = 24/278 (8%) Query: 1 MYKDFFVSILCLIILFFTSF------------STNASILGDIKKRGFLKCGINTGLVGFA 48 M K F ++++ L + + + L IK + G+ T F Sbjct: 1 MKKIFSLALISLFAVILLAACGSKGSNGEASKESKKDTLAAIKDNDKIVFGVKTDTRLFG 60 Query: 49 EVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 ++G+ +GFD+D + ++ I D K ++ + +K R LQ+ ID + T Sbjct: 61 LKNPSSGEIEGFDIDIAKQIAKDILGDEKKAEFKEVTSKTRIPMLQNGDIDAIVATMTIT 120 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + + + GQ ++ K I SV L G+ + G+T+ + + Sbjct: 121 DERKKEVDF--SDVYFEAGQSLLVKKGSKIKSVEDLDKGSKVLAVKGSTSSQNIREKAPE 178 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + FE E A ++ + DA T D + LY + N + + + P Sbjct: 179 AS----VLEFENYAEAFTALKSGQGDALTTDNAILYGMADENKN---YQLTGKPFTDEPY 231 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQKNINQ 263 A+ +G + ++ + M + I +K I + Sbjct: 232 GIAVKKGQSALAKEINASLKKMKSDGRYDEIYKKWIKE 269 >gi|253581218|ref|ZP_04858475.1| extracellular solute-binding protein family 3 [Ruminococcus sp. 5_1_39B_FAA] gi|251847495|gb|EES75468.1| extracellular solute-binding protein family 3 [Ruminococcus sp. 5_1_39BFAA] Length = 330 Score = 205 bits (523), Expect = 7e-51, Method: Composition-based stats. Identities = 64/287 (22%), Positives = 111/287 (38%), Gaps = 23/287 (8%) Query: 1 MYKDFFVSILCLIILFFT--------------SFSTNASILGDIKKRGFLKCGINTGLVG 46 M K +L + T + A L +IKK G +K G+ + Sbjct: 1 MKKKILAVLLATGVAATTLLGGSILVSAADDGGNTAQARTLDEIKKDGKIKIGVFSDKNP 60 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F V NGD +G+D+ F + L+ + ++ + A R LQS ++D++ N Sbjct: 61 FGYVDENGDVQGYDIYFGKRLAKDLLGSEDDAEFTYVEAASRVEYLQSAKVDVILANFTV 120 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T R + A G + I V L G + V GTT E YF Sbjct: 121 TDDRAEKVDFAL--PYMKVALGVVSPDDALIKDVKDLEGKKLIVVKGTTAET----YFTD 174 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + F+ +E A R DA++ D + + A N+ V + + + Sbjct: 175 NYPDIELVKFDEYQEAYDALLDGRGDAFSTDNTEVLAWAQQNE--GFSVGIESLGDIDTI 232 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSKDTTNPD 272 APA+ +G+T+ N ++ ++ + ++ + V D NPD Sbjct: 233 APAVQKGNTDLLNAINDEIKSLADEQFFHKDFEETLKPVYGDNINPD 279 >gi|242238549|ref|YP_002986730.1| extracellular solute-binding protein family 3 [Dickeya dadantii Ech703] gi|242130606|gb|ACS84908.1| extracellular solute-binding protein family 3 [Dickeya dadantii Ech703] Length = 298 Score = 205 bits (523), Expect = 7e-51, Method: Composition-based stats. Identities = 48/251 (19%), Positives = 87/251 (34%), Gaps = 9/251 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD----DPSKIQY 80 L +K G + G V F+ G+ D+ + A+ +++ Sbjct: 28 PTLQKVKDSGVIVIGHRESSVPFSYYDNQQKVVGYSQDYSDKIVEAVKKAVNAPNLQVKL 87 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +P+ ++ R LQ+ D+ +T L R+ + G + K I Sbjct: 88 IPITSQNRIPLLQNGTFDLECGSTTNNLERQQQAAF--SNTIFVIGTRLLTKKGSDIKDF 145 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 S L+G ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 146 SDLNGKAVVVTSGTTSEILLNKMNEEKKMNLRIISAKDHGDSFRTLESGRAVAFMMDDAL 205 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L + P E VI+ S + + D E+ +V T T+ E K Sbjct: 206 LAGERAKAKNPDEWVIVGTPQSHEAYGCMLRKNDPEFKKLVDDTIAQAQTSGE---AVKW 262 Query: 261 INQVSKDTTNP 271 P Sbjct: 263 YEHWFTQPIPP 273 >gi|161524794|ref|YP_001579806.1| extracellular solute-binding protein [Burkholderia multivorans ATCC 17616] gi|189350452|ref|YP_001946080.1| polar amino acid transporter substrate-binding protein [Burkholderia multivorans ATCC 17616] gi|160342223|gb|ABX15309.1| extracellular solute-binding protein family 3 [Burkholderia multivorans ATCC 17616] gi|189334474|dbj|BAG43544.1| polar amino acid transport system substrate-binding protein [Burkholderia multivorans ATCC 17616] Length = 271 Score = 205 bits (523), Expect = 7e-51, Method: Composition-based stats. Identities = 67/256 (26%), Positives = 97/256 (37%), Gaps = 14/256 (5%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDW-KGFDVDFCRALSSAIFDDPSKIQYL 81 A L DIKK G L+ F V A + G DVD+ +AL+ + K+Q Sbjct: 23 QADRLDDIKKAGVLRVATFDSNPPFGYVDAKTNRIVGLDVDYAKALADKLG---VKLQLQ 79 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 P N R L S ++D++ N T R + + I YF + KK + S Sbjct: 80 PTNPANRIPFLTSGKVDLVLANFTITEERAKQVDFS---IPYFSSGQQFLAKKGVLKSAD 136 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 QL+G I GTT E+TL + F + ++ AA RA A T D L Sbjct: 137 QLNGLRIGADKGTTNEITLREKFPKA----TIVAYDDTPFAFAALRAGNVQAITQDGPKL 192 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 L + I P IS + + +G+T V+ T E G + Sbjct: 193 IGLLANVPDKQNYEIPPFTISNDYMGVGVPKGETRLLAFVNDTLKG---LEASGRAAQIY 249 Query: 262 NQVSKDTTNPDVQRFL 277 + TT + R Sbjct: 250 DAWFGPTTKTPLARIF 265 >gi|325576799|ref|ZP_08147414.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Haemophilus parainfluenzae ATCC 33392] gi|325161005|gb|EGC73123.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Haemophilus parainfluenzae ATCC 33392] Length = 285 Score = 205 bits (523), Expect = 7e-51, Method: Composition-based stats. Identities = 62/248 (25%), Positives = 110/248 (44%), Gaps = 15/248 (6%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L I+K G ++ G+ + F V A G +GFDV+ +A+ + D +K++++ ++ Sbjct: 38 SSLEQIQKDGKVRIGVFSDKPPFGYVDAQGKSQGFDVEIGKAIGKDLLGDENKVEFVLVD 97 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 A R L SK++DI+ N T R+ + A G + I+ + QL Sbjct: 98 AANRAEYLLSKKVDIILANFTVTPARKEVVDFAN--PYMKVALGVVSKDGSVITDLEQLK 155 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G ++ V GTT ++ +F + + FE+ E A R R DA + D + L+A Sbjct: 156 GKTLIVDKGTTADI----FFTKNYPDVKLLKFEQNTETFEALRDGRGDALSNDNTFLFAW 211 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG----ITQKN 260 P V + + + +APA+ + E +W + + T + G +K Sbjct: 212 AKQ--NPGYTVGVKNFGDQDVIAPAVRKDAPELL---NWLNNEIQTLGKDGRLKQAYEKT 266 Query: 261 INQVSKDT 268 + V DT Sbjct: 267 LLPVYGDT 274 >gi|76574838|gb|ABA47312.1| probable binding protein component of ABC transporter [Pseudomonas cichorii] Length = 268 Score = 205 bits (523), Expect = 7e-51, Method: Composition-based stats. Identities = 69/280 (24%), Positives = 106/280 (37%), Gaps = 17/280 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59 M K ++ L L +L S +A L DIKK G L+ F V A +G Sbjct: 1 MKKLTAITALSLAVL---SGLAHADRLEDIKKSGVLRVAAFDSNPPFGFVDAKSKQIEGL 57 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD+ +A++ + K+Q P N R L + ++D++ N T R + + F Sbjct: 58 DVDYAKAIADKLG---VKLQLQPTNPANRVPLLMANKVDLVLANFTITPER--AEQVNFS 112 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ FI+ K + + L+ + V GT E L + F I ++ Sbjct: 113 IPYFSSGQQFIVKKGT-LKNQDDLNKWRVGVDKGTVNEGVLREKFPGA----KVIAYDDT 167 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 A R A T D L L ++ + P IS + I +G+T Sbjct: 168 PFAFTALRNGNVQAITQDGPKLIGLLANVPDKDKYEVPPFTISNDLIGVGIPKGETALTE 227 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGI 279 V+ T V E G QK + T + R I Sbjct: 228 FVNQTL---VELESKGQAQKIYDTWFGPNTPTPLARLFKI 264 >gi|238752607|ref|ZP_04614080.1| Glutamate/aspartate periplasmic-binding protein [Yersinia rohdei ATCC 43380] gi|238709198|gb|EEQ01443.1| Glutamate/aspartate periplasmic-binding protein [Yersinia rohdei ATCC 43380] Length = 311 Score = 205 bits (523), Expect = 7e-51, Method: Composition-based stats. Identities = 45/250 (18%), Positives = 93/250 (37%), Gaps = 9/250 (3%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS----KIQYL 81 L IK G + G V F+ G+ D+ + AI + +++ + Sbjct: 41 TLKKIKDNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNLIVDAIKKKLNAPDLQVKLI 100 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 P+ ++ R LQ+ D +T L R+ + G + K I Sbjct: 101 PITSQNRIPLLQNGTFDFECGSTTNNLERQKQAAF--SNTIFVVGTRLLTKKDSNIKDFK 158 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L+ ++ V +GTT+E+ L + M I + + + R A+ D + L Sbjct: 159 DLADKAVVVTSGTTSEVLLNKLNEKDKMNMRIISAKDHGDSFRTLESGRAVAFMMDDALL 218 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 + +P + I+ S+ + + D + ++ T +A+ G+ +K+ Sbjct: 219 AGERAKAKKPDQWEIVGIPQSQEAYGCMLRKDDPAFKALLDETI---ASAQTSGVAEKSF 275 Query: 262 NQVSKDTTNP 271 ++ K+ P Sbjct: 276 DRWFKNPIPP 285 >gi|306825704|ref|ZP_07459043.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432065|gb|EFM35042.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 273 Score = 205 bits (522), Expect = 7e-51, Method: Composition-based stats. Identities = 59/266 (22%), Positives = 110/266 (41%), Gaps = 16/266 (6%) Query: 1 MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVK-ANGDWK 57 M K FF+S L + + + A + DI+KRG L G+ + F G + Sbjct: 10 MKKKFFLSALLISLFSLVAAKPVQADTSVADIQKRGELVVGVKQDVPNFGYKDPKTGTYS 69 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G + D + ++ + K++Y+P+ A+ R L ++Q+D+ T R+ Sbjct: 70 GIETDLAKMVADEL---KVKVRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKLYNF- 125 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y D GF+++K I S+ L+G +I V G+ T+ + + K ++ + + Sbjct: 126 -TSPYYTDASGFLVNKSANIKSIEDLNGKTIGVAQGSITQRLITELGKKKDLTFKFVELG 184 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E+ + AHR DA++ D S L +L D S + +TE Sbjct: 185 SYPELITSLHAHRIDAFSVDRSILSGYTSK-----RTELLDDSFKPSDYGIVTKKSNTEL 239 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQ 263 + + + + G QK ++ Sbjct: 240 NDYLDTLVTKWI---KDGSLQKLYDR 262 >gi|208435066|ref|YP_002266732.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter pylori G27] gi|208432995|gb|ACI27866.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter pylori G27] Length = 277 Score = 205 bits (522), Expect = 7e-51, Method: Composition-based stats. Identities = 61/269 (22%), Positives = 116/269 (43%), Gaps = 10/269 (3%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F V I + S L IK+RG LK G+ + F V + G ++G+DV Sbjct: 13 FLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGQYQGYDVVIA 72 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 + ++ + D +KI+++P+ A R L++ ++DI+ N T RE + A Y Sbjct: 73 KRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKVVDFAK---PYM 129 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K I ++ +L + V GTT + YF + + FE+ E Sbjct: 130 KVALGVISKDGVIKNIEELKDKELIVNKGTTADF----YFTKNYPNIKLLKFEQNTETFL 185 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 A ++ A D + L A P + + + K +APAI +G+ + ++ Sbjct: 186 ALLNNKATALAHDNTLLLAWAKQ--HPEFKLGITSLGDKDVIAPAIKKGNPKLLEWLNNE 243 Query: 245 HYAMVTAEELG-ITQKNINQVSKDTTNPD 272 ++++++ L ++ + V D P+ Sbjct: 244 IDSLISSDFLKEAYKETLEPVYGDEIKPE 272 >gi|91789746|ref|YP_550698.1| extracellular solute-binding protein [Polaromonas sp. JS666] gi|91698971|gb|ABE45800.1| amino acid ABC transporter substrate-binding protein, PAAT family [Polaromonas sp. JS666] Length = 298 Score = 205 bits (522), Expect = 7e-51, Method: Composition-based stats. Identities = 55/280 (19%), Positives = 118/280 (42%), Gaps = 10/280 (3%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF---DD 74 + + + +K G + G+ G + +G + G+ VD C+ + + + Sbjct: 17 GAIAQANDTIAKVKASGVVTMGVRDSS-GLSFTLGDGKYAGYHVDVCQRILARLEKTVGK 75 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 +++YLP+ ++ R +Q+ +DI +T R+ + A T+ + + Sbjct: 76 KLEVKYLPVTSQNRIPLVQNGTVDIECGSTTNNATRQKDVAFAV--TTFVEEVRIAVKAD 133 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 GI+S++QL+G S+ GTT+ TL +A + + + + + + R DA+ Sbjct: 134 SGITSIAQLNGKSVATTTGTTSVQTLRKNERATGIDFKEVFGKDHSDSFLLLESGRADAF 193 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D S L + + P+ I+ +++S P+A + + D + + T ++ + EL Sbjct: 194 VMDGSILASNIANSKNPAGFKIVGEVLSVEPIAIMMRKDDPAFKKLSDDTIKDLIKSGEL 253 Query: 255 GITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKD 294 K ++ P R +G+ S + A D Sbjct: 254 ---AKIYDKWLMQPVPPKNVR-VGLPASDSTKAAWATPND 289 >gi|33595038|ref|NP_882681.1| extracellular solute-binding protein [Bordetella parapertussis 12822] gi|33599318|ref|NP_886878.1| extracellular solute-binding protein [Bordetella bronchiseptica RB50] gi|33565114|emb|CAE40067.1| probable extracellular solute-binding protein [Bordetella parapertussis] gi|33575364|emb|CAE30827.1| probable extracellular solute-binding protein [Bordetella bronchiseptica RB50] Length = 304 Score = 205 bits (522), Expect = 7e-51, Method: Composition-based stats. Identities = 50/251 (19%), Positives = 95/251 (37%), Gaps = 9/251 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA----IFDDPSKIQY 80 L I G + G + F+ AN G+ +D C + A I D +++Y Sbjct: 29 GTLKKISDTGVITIGHRETSIPFSYYDANQKPVGYSIDICTRIVDAVKTRIKRDDIQVKY 88 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 LP+ + R + + ID+ +T TL R+ + T+ G FI K + ++ Sbjct: 89 LPVTSATRIPLMGNGTIDLECASTSNTLDRQKQVAF--SVTTFVTGNRFISLKSANLKTI 146 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L G ++ +GT + +A ++ + + E R A+ D Sbjct: 147 DDLKGKTVASTSGTANIRQANEINEARSLGMKVVPVKEHAEGFLMVETGRAAAFIMDDIL 206 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 LY L P + + D +S P A + + D ++ +V T ++ + G + Sbjct: 207 LYGLAANAKEPDRYQVSGDSLSIEPYAIMLRRDDPQFKALVDDTIKSLYAS---GDFEAL 263 Query: 261 INQVSKDTTNP 271 + + P Sbjct: 264 YKRWYQSPLPP 274 >gi|209516854|ref|ZP_03265704.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] gi|209502670|gb|EEA02676.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] Length = 272 Score = 205 bits (522), Expect = 8e-51, Method: Composition-based stats. Identities = 66/285 (23%), Positives = 104/285 (36%), Gaps = 15/285 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 M F + + ++L F+ +A L DIKK G L+ F V G Sbjct: 1 MKIKFVGAAVMGLLLAFSGV-AHADRLDDIKKAGVLRVATFDSNAPFGFVDPKTNQIVGL 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD+ RA+++ + K++ P N R L+S ++D++ N T R + + Sbjct: 60 DVDYARAVANKLG---VKLEIQPTNPANRIAFLKSGKVDLVFANFTITDERRKEVDFS-- 114 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 YF + KK + S QL+ + GTT E + F + ++ Sbjct: 115 -TPYFASGTQFIAKKGVLKSAQQLNNLRVGADKGTTNEQQVRAQFPNA----TIVAYDDT 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AA RA A T D L AL + + I P IS + +G+T N Sbjct: 170 PFAFAALRAGNVQAITQDGPKLVALLANVPDKANYEIPPFTISNDYEGVGVPKGETRLLN 229 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSN 284 +V T E G K + + + R I Sbjct: 230 VVDDTLKG---LEADGSAAKIYDHWFGPESRAPLPRLFKIGDPQK 271 >gi|116695573|ref|YP_841149.1| ABC transporter periplasmic protein [Ralstonia eutropha H16] gi|113530072|emb|CAJ96419.1| ABC-type transporter, periplasmic component: PAAT family [Ralstonia eutropha H16] Length = 312 Score = 205 bits (522), Expect = 8e-51, Method: Composition-based stats. Identities = 51/245 (20%), Positives = 94/245 (38%), Gaps = 8/245 (3%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA----IFDDP 75 ST + +L I++ G + G + F+ G G+ VD C + A + Sbjct: 38 ASTQSPVLDKIRESGTIVLGYRESALPFSFADDKGQPAGYAVDLCLRAAEAARQQLGLKD 97 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 K++++PL + R A+ + +D+ +L R+ + + Y ++ Sbjct: 98 LKVRWMPLTPQNRIPAVVNGLVDLDCAPNTNSLERQKQVAFSVS--HYVSTVRMLVRADS 155 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 GI S L G ++ AG+T + + YH + + E + R A+ Sbjct: 156 GIRSFGDLRGKTVVTSAGSTGDRHVRRM--KAQYGYHDVYAKDHGESFLLLESGRAQAFV 213 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D L L+ PS++VI+ +S A + + D EW +V E+ Sbjct: 214 MDDVLLAGLRARAKDPSQYVIVGPALSVEQNALMLSKADPEWKRLVDQALANTFAGPEVT 273 Query: 256 ITQKN 260 QK Sbjct: 274 ALQKR 278 >gi|317012953|gb|ADU83561.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter pylori Lithuania75] Length = 277 Score = 205 bits (522), Expect = 8e-51, Method: Composition-based stats. Identities = 62/269 (23%), Positives = 117/269 (43%), Gaps = 10/269 (3%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F V I + S L IK+RG LK G+ + F V + G ++G+DV Sbjct: 13 FLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGQYQGYDVIIA 72 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 + ++ + D +KI+++P+ A R L++ ++DI+ N T RE + A Y Sbjct: 73 KRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKVVDFAK---PYM 129 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K I ++ +L + V GTT + YF + + FE+ E Sbjct: 130 KVALGVISKDGVIKNIEELKDKELIVNKGTTADF----YFTKNYPNIKLLKFEQNTETFL 185 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 A ++ A D + L A T P + + + K +APAI +G+ + ++ Sbjct: 186 ALLNNKAIALAHDNTLLLAW--TKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLEWLNNE 243 Query: 245 HYAMVTAEELG-ITQKNINQVSKDTTNPD 272 ++++++ L ++ + V D P+ Sbjct: 244 IDSLISSDFLKEAYKETLEPVYGDGIKPE 272 >gi|319791541|ref|YP_004153181.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] gi|315594004|gb|ADU35070.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] Length = 299 Score = 205 bits (522), Expect = 8e-51, Method: Composition-based stats. Identities = 54/257 (21%), Positives = 104/257 (40%), Gaps = 9/257 (3%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF---DD 74 +F+ L IK G + G+ G + NG + GF D C + + Sbjct: 17 GAFAQANDTLAKIKASGVITEGVRESS-GLSYTLGNGQYTGFHYDVCANIIKDLEKAAGK 75 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 ++++ P+ ++ R +Q+ +DI +T R+ + TY + ++ Sbjct: 76 KLEVKFQPVTSQNRIPLVQNGTVDIECGSTTNNATRQKDVAF--GVTTYVEETKIVVKAN 133 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 GI+S++ L ++ GTT T+ +A N+ + + + + R DA+ Sbjct: 134 SGINSLADLKDKTVATTTGTTPLQTVRKQKRAENLSFKEVYGKDHSDSFLLLETGRADAF 193 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D S L AL + P ++ ILPD+++ P+ I + D + V + A + EL Sbjct: 194 VMDGSILAALAAKSKSPKDYKILPDVLAVEPIGIMIRKDDPAFKKAVDDSIKAQAKSGEL 253 Query: 255 GITQKNINQVSKDTTNP 271 K ++ P Sbjct: 254 ---AKLYDKWFLKPIPP 267 >gi|261404399|ref|YP_003240640.1| family 3 extracellular solute-binding protein [Paenibacillus sp. Y412MC10] gi|329929709|ref|ZP_08283395.1| putative major cell-binding factor [Paenibacillus sp. HGF5] gi|261280862|gb|ACX62833.1| extracellular solute-binding protein family 3 [Paenibacillus sp. Y412MC10] gi|328935926|gb|EGG32385.1| putative major cell-binding factor [Paenibacillus sp. HGF5] Length = 269 Score = 205 bits (522), Expect = 8e-51, Method: Composition-based stats. Identities = 61/277 (22%), Positives = 111/277 (40%), Gaps = 23/277 (8%) Query: 1 MYKDFF------VSILCLIILFFTSF---STNASILGDIKKRGFLKCGINTGLVGFAEVK 51 M + F ++L L+I+ S S + L IKKRG L G+ F Sbjct: 1 MKRRFTGTFRWSAALLALVIMLIASGCGGSGSTDTLEAIKKRGKLVAGVKYDTKLFGLQD 60 Query: 52 -ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 A G+ +GFD+D +AL+ I D +K++ + +K R L++ IDI+ T R Sbjct: 61 PATGNVEGFDIDIAKALAKKILGDETKVELKEVTSKTRIDMLKNGDIDIIIATMTITEER 120 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNM 169 + + + + GQ ++ K I+ + L + G+T+ + + Sbjct: 121 KEQVDF--SDVYFEAGQSLLVKKGSPITGLESLNKDTKVLTVKGSTSAQNIREKAPDA-- 176 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + FE ++ A +A + DA T D S L ++ + ++ + P A Sbjct: 177 --VILEFENYQDAFTALKAGQGDALTTDNSILLGMQQQDPS---FELVGGNFTDEPYGMA 231 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 I +G+ E+ V+ + + E K Q Sbjct: 232 IKKGNPEFVKTVNELLKELKDSGE---YDKLYEQWMG 265 >gi|49475801|ref|YP_033842.1| amino-acid ABC transporter binding protein [Bartonella henselae str. Houston-1] gi|49238608|emb|CAF27849.1| Amino-acid ABC transporter binding protein [Bartonella henselae str. Houston-1] Length = 303 Score = 205 bits (522), Expect = 8e-51, Method: Composition-based stats. Identities = 61/276 (22%), Positives = 102/276 (36%), Gaps = 11/276 (3%) Query: 1 MYKDFFVSILCL--IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K + I II L IKK G + G+ G NG + G Sbjct: 1 MRKSLLIFIAATTTIIGLIGIAKAENDTLEKIKKTGEVTLGVRESS-GLGYALGNGKYVG 59 Query: 59 FDVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 F + + I P KI YLP+ ++ R LQ+ D +T + R Sbjct: 60 FHTEMAEHIIDDISKKIGKPIKIHYLPITSQNRIPLLQNNTYDFECGSTTNDIFRSKEAA 119 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 A TY + + K I S+ L+G +I GTT + +A N+ + + Sbjct: 120 FA--YTTYVEEVRIAVKKNSNIKSLEDLNGKTIATTTGTTAVQLIRKNKRAKNINFKVVK 177 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + + R DA+ D S L + PS++VIL ++S P+A + D Sbjct: 178 GKDHGDSFLLLESGRADAFIMDASILAGHIAKSKNPSDYVILDTVLSVEPIACMLRLNDQ 237 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + ++ + + L +K ++ P Sbjct: 238 NLEHAINESIVHQIKDHSL---EKLYDKWFMKPIPP 270 >gi|317177920|dbj|BAJ55709.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter pylori F16] Length = 277 Score = 205 bits (522), Expect = 8e-51, Method: Composition-based stats. Identities = 61/269 (22%), Positives = 115/269 (42%), Gaps = 10/269 (3%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F V I + S L IK+RG LK G+ + F V + G ++G+DV Sbjct: 13 FLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGYDVVIA 72 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 + ++ + D +KI+++P+ A R L++ ++DI+ N T RE + A Y Sbjct: 73 KRMAFDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKVVDFAK---PYM 129 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K I ++ +L + V GTT + YF + + FE+ E Sbjct: 130 KVALGVVSKDGVIKNIEELKDKELIVNKGTTADF----YFTKNYPNIKLLKFEQNTETFL 185 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 A + A D + L A P + + + K +APAI +G+ + ++ Sbjct: 186 ALLNDKAIALAHDNTLLLAWIKQ--HPEFKLGITSLGDKDVIAPAIKKGNPKLLEWLNNE 243 Query: 245 HYAMVTAEELG-ITQKNINQVSKDTTNPD 272 ++++++ L ++ + V D P+ Sbjct: 244 MDSLISSDFLKEAYKETLEPVYGDGIKPE 272 >gi|299531139|ref|ZP_07044551.1| extracellular solute-binding protein [Comamonas testosteroni S44] gi|298720842|gb|EFI61787.1| extracellular solute-binding protein [Comamonas testosteroni S44] Length = 293 Score = 205 bits (522), Expect = 8e-51, Method: Composition-based stats. Identities = 50/286 (17%), Positives = 106/286 (37%), Gaps = 11/286 (3%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 ++LC + + +A L ++ G + V F+ + NG G V+ + + Sbjct: 6 TVLCAALGLGFLGAVHADTLAKVRDSGRITLAYRESSVPFSYLD-NGKPIGMTVELSQTV 64 Query: 68 SSAIFD----DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 + A+ ++++ + ++ R L + ID+ +T +R +G A + Sbjct: 65 AEAVKKQLNLPALEVRWQAVTSQNRMPLLANGTIDLECGSTTNNTVRAKEVGFAIN--HF 122 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 + G ++ K GI S + L G + + GTT L + ++ + + Sbjct: 123 YTGTRLLVKKSSGIQSYADLKGKTAAITTGTTNLQVLRKANAEQGWGMNIVMAKDHADGF 182 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 R A+ D LY L P + ++ D + P A + + D ++ +V Sbjct: 183 LLVENDRAAAFGMDDILLYGLIANAKNPRDFHVVADALQVEPYACMLRKDDPQFKQLVDG 242 Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEAL 289 M+ + G + ++ P LG+ S + L Sbjct: 243 VIGDMMKS---GAFARLYDRWFMQPIPPK-NAALGLPMSEQLQRNL 284 >gi|108563536|ref|YP_627852.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter pylori HPAG1] gi|107837309|gb|ABF85178.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter pylori HPAG1] Length = 277 Score = 205 bits (522), Expect = 8e-51, Method: Composition-based stats. Identities = 62/269 (23%), Positives = 117/269 (43%), Gaps = 10/269 (3%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F V I + S L IK+RG LK G+ + F V + G ++G+DV Sbjct: 13 FLVLIALVFNACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGYDVVIA 72 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 + ++ + D +KI+++P+ A R L++ ++DI+ N T RE + A Y Sbjct: 73 KRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKVVDFAK---PYM 129 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K I ++ +L + V GTT + YF + + FE+ E Sbjct: 130 KVALGVVSKDGVIKNIEELKDKELIVNKGTTADF----YFTKNYPNIKLLKFEQNTETFL 185 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 A ++ A D + L A T P + + + K +APAI +G+ + ++ Sbjct: 186 ALLNNKAIALAHDNTLLLAW--TKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLEWLNNE 243 Query: 245 HYAMVTAEELG-ITQKNINQVSKDTTNPD 272 ++++++ L ++ + V D P+ Sbjct: 244 IDSLISSDFLKEAYKETLEPVYGDEIKPE 272 >gi|27375213|ref|NP_766742.1| glutamate/aspartate periplasmic binding protein [Bradyrhizobium japonicum USDA 110] gi|27348349|dbj|BAC45367.1| glutamate/aspartate periplasmic binding protein precursor [Bradyrhizobium japonicum USDA 110] Length = 308 Score = 205 bits (522), Expect = 8e-51, Method: Composition-based stats. Identities = 52/244 (21%), Positives = 97/244 (39%), Gaps = 6/244 (2%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 S+L L T + L IKK ++ G F+ + +G G+ ++ C Sbjct: 16 LAASLLATTALAQTGSEGLSPTLSAIKKAHVVRLGYRESSPPFSFLDQSGRPIGYSLELC 75 Query: 65 RALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 A+ I + KI Y+ + + +R A+ +ID+ +T R + +AF P Sbjct: 76 EAIVEEIGVEVDDPNLKIDYVKVTSDDRIDAVLQNKIDLECGSTTANAER--AKRVAFSP 133 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + + G ++ K + S++ L G +I V GTT E + K ++ V E Sbjct: 134 LMFVAGTKLMVPKASSVQSLTDLKGKTIVVTKGTTNEQAIQAADKKSSLGLTIAVGADHE 193 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + + DA+ D L L + ++ + D +S P +G+ + + Sbjct: 194 QSFQMLADGKADAFATDDILLSGLIARHKAQDKYRVTGDYLSYDPYGIMFRKGEPQLSAV 253 Query: 241 VSWT 244 V T Sbjct: 254 VERT 257 >gi|309780275|ref|ZP_07675026.1| glutamate/aspartate periplasmic-binding protein [Ralstonia sp. 5_7_47FAA] gi|308920978|gb|EFP66624.1| glutamate/aspartate periplasmic-binding protein [Ralstonia sp. 5_7_47FAA] Length = 301 Score = 205 bits (522), Expect = 9e-51, Method: Composition-based stats. Identities = 49/261 (18%), Positives = 95/261 (36%), Gaps = 9/261 (3%) Query: 10 LCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 L L L A L I+ + G+ + F+ + + GF D C + Sbjct: 13 LALASLLAIGAHAQALDGTLKKIQDSNTILIGVRESSIPFSYRDSKNEIVGFSADLCSRV 72 Query: 68 SSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 A+ K I+++P+ ++ R +Q+ +D+ T RE + Sbjct: 73 IDAVKKKTGKPNLDIKHIPVTSQNRTSLVQNGSVDLECGVTTHLKSREQQTAF--STTFF 130 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 G + + K G+ L+G S+ AGTT+E L M + I + E Sbjct: 131 IAGTRLLTNVKSGVKDFPDLAGKSVITNAGTTSERILRRMNDEKKMNMNVISGKDYGESF 190 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 ++ R A+ D L + +P + V+ S + + D ++ +V Sbjct: 191 LTLQSGRVAAFMMDDVLLAGARTLAQKPDDWVVTGTPQSFEAYGFMLRRDDPQFKKLVDD 250 Query: 244 THYAMVTAEELG-ITQKNINQ 263 T ++ + E+ + K + Sbjct: 251 TMTGVMKSGEIKALYAKWFEK 271 >gi|197284337|ref|YP_002150209.1| glutamate and aspartate transporter subunit [Proteus mirabilis HI4320] gi|227358519|ref|ZP_03842844.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, substrate-binding protein [Proteus mirabilis ATCC 29906] gi|194681824|emb|CAR41086.1| glutamate/aspartate ABC transporter, substrate-binding protein [Proteus mirabilis HI4320] gi|227161230|gb|EEI46304.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, substrate-binding protein [Proteus mirabilis ATCC 29906] Length = 297 Score = 205 bits (522), Expect = 9e-51, Method: Composition-based stats. Identities = 51/275 (18%), Positives = 101/275 (36%), Gaps = 10/275 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +S++ L L I + G V F+ G+ Sbjct: 3 MRK-LALSLMILGAAGAVQAEELTGTLKKINDNDIIIVGHRESSVPFSYYDNQQKVVGYS 61 Query: 61 VDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 D+ + A+ + K ++ +P+ ++ R LQ+ D +T L R+ Sbjct: 62 QDYSNLIVEAVKEKLGKPNLQVRLIPITSQNRIPLLQNGTFDFECGSTTNNLARQQQADF 121 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + G + K GI + L+G ++ V +GTT+E+ L M I Sbjct: 122 --SNTIFIVGTRLLAKKDSGIKDFADLAGKNVVVTSGTTSEMLLNKLNDEKKMNMRIISA 179 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + + R A+ D + L + +P+ I+ S+ + +GDT+ Sbjct: 180 KDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPALWEIVGTPQSEEAYGCMLRKGDTQ 239 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + +++ T A++ G +K+ N+ P Sbjct: 240 FKSLIDETI---ANAQKSGAAEKSFNRWFNAPIPP 271 >gi|53728918|ref|ZP_00134502.2| COG0834: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126209158|ref|YP_001054383.1| antigenic protein, ABC transporter-like protein [Actinobacillus pleuropneumoniae L20] gi|190151024|ref|YP_001969549.1| antigenic protein, ABC transporter-like protein [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307264383|ref|ZP_07545970.1| hypothetical protein appser13_17750 [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|126097950|gb|ABN74778.1| antigenic protein, ABC transporter-like protein [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|189916155|gb|ACE62407.1| antigenic protein, ABC transporter-like protein [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306870270|gb|EFN02027.1| hypothetical protein appser13_17750 [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 278 Score = 205 bits (522), Expect = 9e-51, Method: Composition-based stats. Identities = 59/278 (21%), Positives = 118/278 (42%), Gaps = 17/278 (6%) Query: 3 KDFFVSILCLIILFF------TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 K + + L ST + IK++G ++ G+ F V ANG Sbjct: 8 KTLLATAITAFALTACDNANNAQSSTAKDSVAQIKEKGVIRIGVFGDKPPFGYVDANGKS 67 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +GFDV+ + +++ + K++++ A R L+S ++D++ N T R + + Sbjct: 68 QGFDVEIAKEIANDLLGSSDKVEFVLTEAANRVEYLKSNKVDLILANFTKTPER--AEVV 125 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F G + K IS + QL G ++ V GTT + YF ++ + + + F Sbjct: 126 DFAAPYMNVALGVVSPKGALISDLKQLEGKTLLVNKGTTADA----YFTKNHPEINLLKF 181 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 ++ E A + R A D + ++A + P+ V + + +APA+ +G+ Sbjct: 182 DQNTETFDALKDGRGVALAHDNALVWAWAK--ENPTFDVAIGSVGPAEQIAPAVQKGNQA 239 Query: 237 WYNIVSWTHYAMVTAEELG-ITQKNINQVSKDTTNPDV 273 ++++ T +L +K + V D P++ Sbjct: 240 LLDVINKEIAEFKTNGKLKAAYEKTLVPVYGD--KPEL 275 >gi|306829074|ref|ZP_07462264.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus mitis ATCC 6249] gi|304428160|gb|EFM31250.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus mitis ATCC 6249] Length = 264 Score = 205 bits (522), Expect = 9e-51, Method: Composition-based stats. Identities = 59/266 (22%), Positives = 107/266 (40%), Gaps = 16/266 (6%) Query: 1 MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVK-ANGDWK 57 M K FF+S L + + + A + DI+KRG L G+ + F G + Sbjct: 1 MKKKFFLSALLISLFSLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYS 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G + D + ++ + K++Y+P+ A+ R L ++Q+D+ T R+ Sbjct: 61 GIETDLSKMIADEL---KVKVRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKLYNF- 116 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y D GF+++K I S L+G +I V G+ T+ + + K + + + Sbjct: 117 -TSPYYTDASGFLVNKSANIKSFEDLNGKTIGVAQGSITQRLITELGKKKGLTFKFVELG 175 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E+ + AHR DA++ D S L +L D S + +TE Sbjct: 176 SYPELITSLHAHRIDAFSVDRSILSGYTSK-----RTELLDDSFKPSDYGIVTKKSNTEL 230 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQ 263 + + + G QK ++ Sbjct: 231 NDYLDTLVTKWT---KDGSLQKLYDR 253 >gi|300312815|ref|YP_003776907.1| amino acid ABC transporter/signal transduction system periplasmic protein [Herbaspirillum seropedicae SmR1] gi|300075600|gb|ADJ64999.1| ABC-type amino acid transport/signal transduction system, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 305 Score = 205 bits (522), Expect = 9e-51, Method: Composition-based stats. Identities = 51/262 (19%), Positives = 96/262 (36%), Gaps = 7/262 (2%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 + + L + S L IK + G T + F+ N G+ D C Sbjct: 14 LSMMLAVLPQQACAADSALGPTLQKIKDANLIAIGHRTSSIPFSYYDENQQVIGYSQDLC 73 Query: 65 RALSSA----IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 + A I +++ +P+ ++ R LQ+ ID+ T R + A Sbjct: 74 NKVIDAVKTKIGAAKLEVRMVPVTSQNRTPLLQNGTIDLECGVTSNLKSRWQQVSFATN- 132 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + + + GI L+G ++ AGTT+E L + + M + Sbjct: 133 -FFVASSRILTKRDSGIKDFPDLAGKAVVTNAGTTSEQLLRNLNEHRKMGMQIQSAKDYG 191 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E ++ R AY D L + T +P++ V+ + P A + + D ++ + Sbjct: 192 EAFLILQSGRVAAYVMDDVLLAGARTTAQKPNDWVLTGNPFGAEPYAFMVRRDDPQFKQL 251 Query: 241 VSWTHYAMVTAEEL-GITQKNI 261 V T ++ + E+ I K Sbjct: 252 VDDTLSGLMKSGEIKKIYAKWF 273 >gi|291485150|dbj|BAI86225.1| glutamine ABC transporter, glutamine-binding protein [Bacillus subtilis subsp. natto BEST195] Length = 273 Score = 205 bits (521), Expect = 9e-51, Method: Composition-based stats. Identities = 54/278 (19%), Positives = 109/278 (39%), Gaps = 24/278 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA------------SILGDIKKRGFLKCGINTGLVGFA 48 M K F ++++ L + + ++ L IK + G+ T F Sbjct: 1 MKKIFSLALISLFAVILLAACSSKGSNGEASKESKKDTLAAIKDNDKIVFGVKTDTRLFG 60 Query: 49 EVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 ++G+ +GFD+D + ++ I D K ++ + +K R LQ+ ID + T Sbjct: 61 LKNPSSGEIEGFDIDIAKQIAKDILVDEKKAEFKEVTSKTRIPMLQNGDIDAIVATMTIT 120 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + + + GQ ++ K I SV L G+ + G+T+ + + Sbjct: 121 DERKKEVDF--SDVYFEAGQSLLVKKGSKIKSVEDLDKGSKVLAVKGSTSSQNIREKAPE 178 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + FE E A ++ + DA T D + LY + N + + + P Sbjct: 179 AS----VLEFENYAEAFTALKSGQGDALTTDNAILYGMADENKN---YQLTGKPFTDEPY 231 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQKNINQ 263 A+ +G + ++ + M + I +K I + Sbjct: 232 GIAVKKGQSALAKEINASLKKMKSDGRYDEIYKKWIKE 269 >gi|116326670|ref|YP_796444.1| amino acid ABC transporter periplasmic protein [Lactobacillus casei ATCC 334] gi|116106488|gb|ABJ71629.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus casei ATCC 334] Length = 284 Score = 205 bits (521), Expect = 9e-51, Method: Composition-based stats. Identities = 70/289 (24%), Positives = 121/289 (41%), Gaps = 29/289 (10%) Query: 1 MYKDFF------VSILCLIILFFTSFSTNASI---------LGDIKKRGFLKCGINTGLV 45 M K F VS+ ++L T + + IKK G ++ + L Sbjct: 1 MKKRLFTRIIAVVSVFAALLLVLTGCGNSKKSSSQSNNPSSVQQIKKNGTIRIAVFGDLP 60 Query: 46 GFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105 + V +G G+DV ++ + K++++ +NA R AL S ++D++ N Sbjct: 61 PYGWVNKDGKRVGYDVTLAHQVAKDLG---VKVKFVQVNANNRVDALNSNKVDLVLANFT 117 Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165 T R+ + A G + K K I+ SQL G ++ V GTT E +YF Sbjct: 118 VTPERKQVIDFA--KPYMKVSVGVVSPKNKAITKASQLKGKNVIVTKGTTAE----NYFT 171 Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225 + + F+ + A + R A D S LYA + D PS V + I KS Sbjct: 172 SKQPDVKLLKFDSKTQQFNALKNGRGVALADDNSYLYAW--SKDNPSYTVGIKSIGPKSY 229 Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 +APA+ +G+ ++++WT+ + + K+ N K +V+ Sbjct: 230 IAPAVKKGN---KSLLNWTNKEINKLTKQSFFVKDYNTQLKPYFGKEVK 275 >gi|308184914|ref|YP_003929047.1| glutamine ABC transporter periplasmic glutamine-binding protein [Helicobacter pylori SJM180] gi|308060834|gb|ADO02730.1| glutamine ABC transporter periplasmic glutamine-binding protein [Helicobacter pylori SJM180] Length = 277 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 62/269 (23%), Positives = 115/269 (42%), Gaps = 10/269 (3%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F V I + S L IK+RG LK G+ + F V + G ++G+DV Sbjct: 13 FLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGYDVVIA 72 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 + ++ + D +KI+++P+ A R L++ ++DI+ N T RE + A Y Sbjct: 73 KRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKVVDFAK---PYM 129 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K I ++ +L + V GTT + YF H + FE+ E Sbjct: 130 KVALGVVSKDGVIKNIEELENKELIVNKGTTADF----YFTKHYPNIKLLKFEQNTETFL 185 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 A ++ A D + L A P + + + K +APAI +G+ + + Sbjct: 186 ALLNNKAIALAHDNTLLLAWIKQ--HPEFKLGITSLGDKDVIAPAIKKGNPKLLEWLDNE 243 Query: 245 HYAMVTAEELG-ITQKNINQVSKDTTNPD 272 ++++++ L ++ + V D P+ Sbjct: 244 MDSLISSDFLKEAYKETLEPVYGDEIKPE 272 >gi|261838498|gb|ACX98264.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter pylori 51] Length = 287 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 62/269 (23%), Positives = 116/269 (43%), Gaps = 10/269 (3%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F V I + S L IK+RG LK G+ + F V + G ++G+DV Sbjct: 23 FLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGYDVVIA 82 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 + ++ + D +KI+++P+ A R L++ ++DI+ N T RE + A Y Sbjct: 83 KRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKVVDFAK---PYM 139 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K I ++ +L + V GTT + YF + + FE+ E Sbjct: 140 KVALGVISKDGVIKNIEELKDKELIVNKGTTADF----YFTKNYPNIKLLKFEQNTETFL 195 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 A + A D + L A T P + + + K +APAI +G+ + ++ Sbjct: 196 ALLNDKAIALAHDNTLLLAW--TKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLEWLNNE 253 Query: 245 HYAMVTAEELG-ITQKNINQVSKDTTNPD 272 ++++++ L ++ + V D P+ Sbjct: 254 MDSLISSDFLKEAYKETLEPVYGDGIKPE 282 >gi|73540102|ref|YP_294622.1| extracellular solute-binding protein [Ralstonia eutropha JMP134] gi|72117515|gb|AAZ59778.1| extracellular solute-binding protein, family 3 [Ralstonia eutropha JMP134] Length = 302 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 45/277 (16%), Positives = 95/277 (34%), Gaps = 12/277 (4%) Query: 2 YKDFFVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 F L + + + + L IK G + G T + F+ +N G Sbjct: 5 KATFLCLALAASLPAGLAHAVDVAASPTLSKIKSSGTISIGHRTSSIPFSYYDSNQKVIG 64 Query: 59 FDVDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 F D C + + + ++ ++ +P+ ++ R +Q+ +D+ T R+ + Sbjct: 65 FSQDLCDRVVNEVKKQTNQPNLQVRMVPVTSQNRISLVQNGTVDLECGVTTNLKSRQQQV 124 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + G ++ K + S LSG ++ AGTT+E L Sbjct: 125 AF--STTFFVAGTRLLVKKGSPVHDFSDLSGKAVVTNAGTTSERILRRLNDEKKANITIQ 182 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + E ++ R A+ D L + P+E V++ S + + D Sbjct: 183 SAKDYGESFLILQSGRVAAFMMDDVLLSGARTLAPNPAEWVVVGTPQSFEAYGFMLRKDD 242 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + +V ++ + E+ ++ P Sbjct: 243 PGFKQLVDGVLTGLMKSGEINTL---YDKWFLKPVPP 276 >gi|189310258|emb|CAP64356.1| probable extracellular solute-binding protein [Bordetella bronchiseptica 253] Length = 304 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 50/251 (19%), Positives = 94/251 (37%), Gaps = 9/251 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA----IFDDPSKIQY 80 L I G + G + F+ AN G+ +D C + A I D +++Y Sbjct: 29 GTLKKISDTGVITIGHRETSIPFSYYDANQKPVGYSIDICARIVDAVKARIKRDDIQVKY 88 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 LP+ + R + + ID+ +T TL R+ + T+ G FI K + ++ Sbjct: 89 LPVTSATRIPLMGNGTIDLECASTSNTLDRQKQVAF--SVTTFVTGNRFISLKSANLKTI 146 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L G ++ +GT + +A + + + E R A+ D Sbjct: 147 DDLKGKTVVSTSGTANIRQANEINEARGLGMKVVPVKEHAEGFLMVETGRAAAFIMDDIL 206 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 LY L P + + D +S P A + + D ++ +V T ++ + G + Sbjct: 207 LYGLAANAKEPDRYQVSGDSLSIEPYAIMLRRDDPQFKALVDDTIKSLYAS---GDFEAL 263 Query: 261 INQVSKDTTNP 271 + + P Sbjct: 264 YKRWYQSPLPP 274 >gi|325836784|ref|ZP_08166251.1| ABC transporter, substrate-binding protein, family 3 [Turicibacter sp. HGF1] gi|325491162|gb|EGC93451.1| ABC transporter, substrate-binding protein, family 3 [Turicibacter sp. HGF1] Length = 279 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 67/283 (23%), Positives = 118/283 (41%), Gaps = 25/283 (8%) Query: 1 MYKDFF---VSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M K F +L L IL S + A + +I++ G + G+ + F V +N Sbjct: 1 MKKVFLCFMSFLLTLGILGACGESNTSQSEARSIEEIQESGKIIIGVFSDKKPFGYVDSN 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 GD++G+DV F ++ + + ++Y+P+ A R L S ++DI+ N T R+ Sbjct: 61 GDYQGYDVYFGNRIAQDLGVE---VEYVPVEAASRVEYLVSNKVDIILANFTVTEERKEK 117 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + G + I+ V QL+G ++ V GTT E YF + + Sbjct: 118 VDFTL--PYMKVALGVVSPDDALITDVEQLNGKTLIVSKGTTAET----YFTENYPNVNL 171 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + F++ E A R DA + D + + A L N V + + S +A A+ +G Sbjct: 172 LKFDQYSEAYNALLDGRGDALSTDNTEVLAWALENQ--GFSVGVESLGSIDTIAAAVQKG 229 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQ----VSKDTTNPD 272 + E + W + +V + + + V D PD Sbjct: 230 NDELLD---WLNNEIVELGKEDFFHADYEETLAPVYGDAATPD 269 >gi|303253934|ref|ZP_07340055.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae BS455] gi|302599110|gb|EFL66135.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae BS455] Length = 264 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 59/266 (22%), Positives = 108/266 (40%), Gaps = 16/266 (6%) Query: 1 MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVK-ANGDWK 57 M K FF+S L + + + A + DI+KRG L G+ + F G + Sbjct: 1 MKKKFFLSALLISLFGLAATKPVQADTSVADIQKRGELVVGVKQDVPNFGYKDPKTGTYS 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G + D + ++ + K++Y+P+ A+ R L ++Q+D+ T R+ Sbjct: 61 GIETDLAKMVADEL---KVKVRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKLYNF- 116 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y D GF+++K I + L+G +I V G+ T+ + + K + + + Sbjct: 117 -TSPYYTDASGFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLTFKFVELG 175 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E+ + AHR DA++ D S L V+L D S + +TE Sbjct: 176 SYPELITSLHAHRIDAFSVDRSILSGYISK-----RTVLLDDSFKPSDYGIVTKKSNTEL 230 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQ 263 + + + G QK ++ Sbjct: 231 NDYLDTLVTKW---SKDGSLQKLYDR 253 >gi|307130055|ref|YP_003882071.1| glutamate/aspartate ABC transporter periplasmic-binding protein [Dickeya dadantii 3937] gi|306527584|gb|ADM97514.1| periplasmic-binding component of an ABC superfamily glutamate/aspartate transporter [Dickeya dadantii 3937] Length = 307 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 50/284 (17%), Positives = 99/284 (34%), Gaps = 20/284 (7%) Query: 3 KDFFVSILCLIILFFTS----FSTNAS-------ILGDIKKRGFLKCGINTGLVGFAEVK 51 + +S++ + + + +A L +K G + G V F+ Sbjct: 4 RKLALSVMLISTTATMAYAEEQAASAPKEDKSVPTLKKVKDSGVIVIGHRESSVPFSYYD 63 Query: 52 ANGDWKGFDVDFCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 G+ + + A+ +++ LP+ ++ R LQ+ D+ +T Sbjct: 64 NQQKVVGYSQAYSDKIVEAVKKAVGAPNLQVKLLPITSQNRIPLLQNGTFDLECGSTTNN 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 L R+ + G + K GI + L+G ++ V +GTT+E+ L + Sbjct: 124 LERQQQAAF--SNTIFVIGTRLLTKKDSGIKDFTDLNGKAVVVTSGTTSEVLLNKMNEEK 181 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 M I + + + R A+ D + L + P E VI+ S Sbjct: 182 KMNLRIISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKNPDEWVIVGTPQSHEAYG 241 Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + + D E+ +V T + T+ E K + P Sbjct: 242 CMLRKNDPEFKKLVDDTIAQVQTSGE---AVKWYERWFTQPIPP 282 >gi|217034252|ref|ZP_03439670.1| hypothetical protein HP9810_2g31 [Helicobacter pylori 98-10] gi|216943312|gb|EEC22774.1| hypothetical protein HP9810_2g31 [Helicobacter pylori 98-10] Length = 277 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 62/269 (23%), Positives = 116/269 (43%), Gaps = 10/269 (3%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F V I + S L IK+RG LK G+ + F V + G ++G+DV Sbjct: 13 FLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGQYQGYDVVIA 72 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 + ++ + D +KI+++P+ A R L++ ++DI+ N T RE + A Y Sbjct: 73 KRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKVVDFAK---PYM 129 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K I ++ +L + V GTT + YF + + FE+ E Sbjct: 130 KVALGVISKDGVIKNIEELKDKELIVNKGTTADF----YFTKNYPNIKLLKFEQNTETFL 185 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 A + A D + L A T P + + + K +APAI +G+ + ++ Sbjct: 186 ALLNDKAIALAHDNTLLLAW--TKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLEWLNNE 243 Query: 245 HYAMVTAEELG-ITQKNINQVSKDTTNPD 272 ++++++ L ++ + V D P+ Sbjct: 244 IDSLISSDFLKEAYKETLEPVYGDGIKPE 272 >gi|71064880|ref|YP_263607.1| ABC glutamate/aspartate transporter, periplasmic binding protein GltI [Psychrobacter arcticus 273-4] gi|71037865|gb|AAZ18173.1| ABC glutamate/aspartate transporter, periplasmic binding protein GltI [Psychrobacter arcticus 273-4] Length = 319 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 54/293 (18%), Positives = 103/293 (35%), Gaps = 25/293 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI--------LGDIKKRGFLKCGINTGLVGFAEV-K 51 + K + + L + ++ S L IK+ G + G + F+ + Sbjct: 9 LSKPLTLVAFMALALAGCNNNSQTSTETTNTNGTLDKIKESGTIVVGHRDSSIPFSYIAD 68 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 G+ D + A+ + KI+Y + ++ R +Q+ +D +T Sbjct: 69 DPNQPIGYAHDLEMKVVEAVKQKLNMPDLKIRYNLITSQTRIPLVQNGTVDFECGSTTNN 128 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 R+ + + + G + K GI L G ++ AGTT+E + +Y Sbjct: 129 EERQKQVAFSNG--FFEIGTRLLTKKDSGIQGFDDLKGKTLVTTAGTTSERYIREYNDDK 186 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 M + I + E R +A+ D L K P E VI+ + S Sbjct: 187 KMNINIISAKDHGEGFLMLENGRAEAFMMDDVLLAGEKAKAKNPDEWVIVGEPQSFEIYG 246 Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELG----------ITQKNINQVSKDTTN 270 + + D E+ +V + + E+ I KN+N + + N Sbjct: 247 CMMRKDDPEFKAVVDDALATVFKSGEINSIYDKWFLNPIPPKNVNLKFEMSDN 299 >gi|308063955|gb|ADO05842.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter pylori Sat464] Length = 277 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 61/269 (22%), Positives = 114/269 (42%), Gaps = 10/269 (3%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F V I S L IK+RG LK G+ + F V + G ++G+DV Sbjct: 13 FLVLIALAFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGYDVVIA 72 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 + ++ + D +KI+++P+ A R L++ ++DI+ N T RE + A Y Sbjct: 73 KRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTHTKEREKVVDFAK---PYM 129 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K I ++ +L + V GTT + YF + + FE+ E Sbjct: 130 KVALGVISKDGVIKNIEELENKELIVNKGTTADF----YFTKNYPNIKLLKFEQNTETFL 185 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 A ++ A D + L A P + + + K +APAI +G+ + + Sbjct: 186 ALLNNKAIALAHDNTLLLAWIKQ--HPEFKLGITSLGDKDVIAPAIKKGNPKLLEWLDNE 243 Query: 245 HYAMVTAEELG-ITQKNINQVSKDTTNPD 272 ++++++ L ++ + V D P+ Sbjct: 244 MDSLISSDFLKEAYKETLEPVYGDKIKPE 272 >gi|157145937|ref|YP_001453256.1| hypothetical protein CKO_01690 [Citrobacter koseri ATCC BAA-895] gi|157083142|gb|ABV12820.1| hypothetical protein CKO_01690 [Citrobacter koseri ATCC BAA-895] Length = 277 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 61/276 (22%), Positives = 102/276 (36%), Gaps = 15/276 (5%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDV 61 K +++ L + A L DIK G +K F V G+DV Sbjct: 10 KKTLLALSALFASGIAALPAQADQLADIKAAGVVKVATFDANPPFGSVDPQTHKIVGYDV 69 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 DF AL+ ++ K++ + N R LQS + D++ + T R + Sbjct: 70 DFAEALAKSLG---VKLELVATNPANRIPLLQSGKADLIVADITITPERAQVIDF--SVP 124 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + GQ F++ + + S A I GTT E L F + + ++ + Sbjct: 125 YFITGQQFLVPATSPDK-LDEYSRARIGAVKGTTGEQALHQRFP----QSRVLAYDDIPL 179 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A R A T D + L L + ILPD++SK + + +G+ V Sbjct: 180 ALTALRNGNVQAITQDSTILAGLLSGAPDKANFKILPDLLSKEEIGVGVKKGEPALLKAV 239 Query: 242 SWTHYAMVTAEELGITQKNIN-QVSKDTTNPDVQRF 276 + ++ E G K + +T NP + F Sbjct: 240 ND---ELLKLESTGQAAKIYDVWFGPETKNPQPRAF 272 >gi|317180903|dbj|BAJ58689.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter pylori F32] Length = 277 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 62/269 (23%), Positives = 116/269 (43%), Gaps = 10/269 (3%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F V I + S L IK+RG LK G+ + F V + G ++G+DV Sbjct: 13 FLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGQYQGYDVVIA 72 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 + ++ + D +KI+++P+ A R L++ ++DI+ N T RE + A Y Sbjct: 73 KRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKVVDFAK---PYM 129 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K I ++ +L + V GTT + YF + + FE+ E Sbjct: 130 KVALGVISKDGVIKNIEELKDKELIVNKGTTADF----YFTKNYPNIKLLKFEQNTETFL 185 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 A + A D + L A T P + + + K +APAI +G+ + ++ Sbjct: 186 ALLNDKAIALAHDNTLLLAW--TKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLEWLNNE 243 Query: 245 HYAMVTAEELG-ITQKNINQVSKDTTNPD 272 ++++++ L ++ + V D P+ Sbjct: 244 MDSLISSDFLKEAYKETLEPVYGDGIKPE 272 >gi|238758025|ref|ZP_04619206.1| Glutamate/aspartate periplasmic-binding protein [Yersinia aldovae ATCC 35236] gi|238703779|gb|EEP96315.1| Glutamate/aspartate periplasmic-binding protein [Yersinia aldovae ATCC 35236] Length = 309 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 45/259 (17%), Positives = 96/259 (37%), Gaps = 9/259 (3%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 ++ L IK G + G V F+ G+ D+ + A+ + Sbjct: 30 AAKAEVSSDTLKKIKDSGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNVIVEAVKKKLN 89 Query: 77 ----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 +++ +P+ ++ R LQ+ D +T L R+ + G + Sbjct: 90 APDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQQQAAF--SNTIFVVGTRLLTK 147 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 K + L+G ++ V +GTT+E+ L + M I + + + R Sbjct: 148 KGTEVKDFKDLAGKAVVVTSGTTSEVLLNKLNEKDKMDMRIISAKDHGDSFRTLESGRAV 207 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 A+ D + L + +P + I+ S+ + + D + ++ T TA+ Sbjct: 208 AFMMDDALLAGERAKAKKPDQWDIVGTAQSQEAYGCMLRKNDPAFKTLMDETI---ATAQ 264 Query: 253 ELGITQKNINQVSKDTTNP 271 G+ +K+ ++ K+ P Sbjct: 265 TSGVAEKSFDRWFKNPIPP 283 >gi|121602735|ref|YP_988960.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Bartonella bacilliformis KC583] gi|121602769|ref|YP_988990.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Bartonella bacilliformis KC583] gi|120614912|gb|ABM45513.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Bartonella bacilliformis KC583] gi|120614946|gb|ABM45547.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Bartonella bacilliformis KC583] Length = 302 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 64/275 (23%), Positives = 111/275 (40%), Gaps = 10/275 (3%) Query: 1 MYKDFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M + V I II S + L IK+ G + G+ G A NG + GF Sbjct: 1 MRRSLSVLITTAIIGLIVSVAHAQNDTLERIKQTGRITLGVRESS-GLAYALGNGRYTGF 59 Query: 60 DVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 + + + I P +I+YLP+ ++ R LQ+ D +T R S+ Sbjct: 60 HTEMAENIINDISKKIGKPIRIRYLPITSQNRIPLLQNNTYDFECGSTTNDTARGRSVAF 119 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 A TY + + K GI S+ L+G +I GTT + +A N+ + I Sbjct: 120 A--YTTYVEEVRIAVKKDSGIKSIQDLNGKTIATTTGTTAVQLIRQNGRAKNINFRVING 177 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + R DA+ D S L + PS+++IL ++S P+A + D Sbjct: 178 RDHADSFLLLESGRADAFIMDSSILAGSISRSRNPSDYMILDAVLSVEPIACMLRLEDKN 237 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + ++ + + + + G +K N+ + P Sbjct: 238 FEQAINDSIVSQI---KDGSLEKLYNKWFMEPIPP 269 >gi|319793095|ref|YP_004154735.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] gi|315595558|gb|ADU36624.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] Length = 299 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 55/278 (19%), Positives = 110/278 (39%), Gaps = 15/278 (5%) Query: 1 MYKDFFV--SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + ++ +++F S + A L +K G + G+ G + G + G Sbjct: 1 MKTQSLLNAAVASALVVFCASAAAEADTLKKLKDTGVITMGVRDGSGAISFTTGPGKYTG 60 Query: 59 FDVDFCRALSSAIFD----DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 F V+ C + + I D +++Y + + R +Q+ +DI T R+ + Sbjct: 61 FHVEICERVIADIKKSAQLDKLEVRYQLVTPQNRIPLVQNGTVDIECGTTTNNAARQKEV 120 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 A P Y +G + I S +QL+G + +G+T+ L + + Sbjct: 121 AFA--PTLYVEGVRIAVKANSPIKSTTQLAGKTAAATSGSTSVQLL----RKLKSDATEL 174 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + E R DA+ D L L + P+++ +L I+S P+A + +GD Sbjct: 175 MAKDNSEGFLLLETGRADAFVADGQILATLISKSKEPAQYRLLDQILSTEPIAIMLPKGD 234 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272 + + V + AM + E+ + ++ P Sbjct: 235 SAFKKAVDQSIEAMARSGEV---ARIYDKWFMKPIPPQ 269 >gi|238791651|ref|ZP_04635289.1| Glutamate/aspartate periplasmic-binding protein [Yersinia intermedia ATCC 29909] gi|238729267|gb|EEQ20783.1| Glutamate/aspartate periplasmic-binding protein [Yersinia intermedia ATCC 29909] Length = 309 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 44/251 (17%), Positives = 94/251 (37%), Gaps = 9/251 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS----KIQY 80 L IK G + G V F+ G+ D+ + A+ + +++ Sbjct: 38 DTLKKIKDSGVIVVGHRESSVPFSYYDNQQKVVGYAQDYSNLIIDAVKKKLNAPDLQVKL 97 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +P+ ++ R LQ+ D +T L R+ + G + K + Sbjct: 98 IPITSQNRIPLLQNGTFDFECGSTTNNLERQQQAAF--SNTIFVVGTRLLTKKGSDVKDF 155 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L+G ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 156 KDLAGKAVVVTSGTTSEVLLNKLNEKDKMDMRIISAKDHGDSFRTLESGRAVAFMMDDAL 215 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L + +P + I+ S+ + + D + ++ T +A+ G+ +K+ Sbjct: 216 LAGERAKAKKPDQWDIVGKPQSQEAYGCMLRKNDPAFKALLDETI---ASAQTSGVAEKS 272 Query: 261 INQVSKDTTNP 271 ++ K+ P Sbjct: 273 FDRWFKNPIPP 283 >gi|253990626|ref|YP_003041982.1| glutamate and aspartate transporter subunit [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253782076|emb|CAQ85240.1| glutamate/aspartate transport system permease protein glti [Photorhabdus asymbiotica] Length = 313 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 50/274 (18%), Positives = 101/274 (36%), Gaps = 9/274 (3%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 ++ ++++ L + L IK G + G V FA + G+ Sbjct: 19 MRNLVLTMMLLGVAGAAQAEELTGTLKKIKDDGVIIVGHRESSVPFAYYDNHQKVVGYSQ 78 Query: 62 DFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 D+ + A+ +++ +P+ ++ R LQ+ D +T L R+ + Sbjct: 79 DYSNLIVEAVKKKLDMPNLQVKLIPVTSQNRIPLLQNGTYDFECGSTSNNLERQKQVTF- 137 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + + K GI L+G ++ V AGTT+E+ L NMK I + Sbjct: 138 -SNTIFIVNTRLLTKKGSGIKDFPDLAGKNVVVSAGTTSEILLNKLNDEKNMKMRIISAK 196 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + + R A+ D + L + +P + I+ S+ + D ++ Sbjct: 197 DHGDSFRTLESGRAIAFMVDDALLAGERAKAKKPDQWEIVGKPQSREAYGCISRKDDLQF 256 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 ++ T V A+ G+ +K+ + P Sbjct: 257 KKLIDETI---VQAQTSGVAEKSFERWFTQPIPP 287 >gi|270293187|ref|ZP_06199398.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus sp. M143] gi|270279166|gb|EFA25012.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus sp. M143] Length = 264 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 59/266 (22%), Positives = 109/266 (40%), Gaps = 16/266 (6%) Query: 1 MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVK-ANGDWK 57 M K FF+S L + + + A + DI+KRG L G+ + F G + Sbjct: 1 MKKKFFLSALLISLFSLAAAKPVQADTSVADIQKRGELVVGVKQDVPNFGYKNPKTGTYS 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G + D + +++ + K++Y+P+ A+ R L ++Q+D+ T R+ Sbjct: 61 GIETDLAKMIANEL---KVKVRYVPVTAQTRGPLLDNEQVDLDIATFTITDERKKLYNF- 116 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y D GF+++K I S+ L+G +I V G+ T+ + + K + + + Sbjct: 117 -TSPYYTDASGFLVNKSANIKSIEDLNGKTIGVAQGSITQRLITELGKKKGLTFKFVELG 175 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E+ + AHR DA++ D S L +L D S + +TE Sbjct: 176 SYPELITSLHAHRIDAFSVDRSILSGYISK-----RTELLEDSFKPSDYGIVTKKSNTEL 230 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQ 263 + + + G QK ++ Sbjct: 231 NDYLDTLVTKW---NKDGSLQKLYDR 253 >gi|317178527|dbj|BAJ56315.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter pylori F30] Length = 277 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 62/269 (23%), Positives = 117/269 (43%), Gaps = 10/269 (3%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F V I + S L IK+RG LK G+ + F V + G ++G+DV Sbjct: 13 FLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGQYQGYDVVIA 72 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 + ++ + D +KI+++P+ A R L++ ++DI+ N T RE + A Y Sbjct: 73 KRMALDLLGDENKIEFIPIEASARVEFLKANKVDIIMANFTRTKEREKVVDFAK---PYM 129 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K I ++ +L + V GTT + YF + + FE+ E Sbjct: 130 KVALGVISKDGVIKNIEELKDKELIVNKGTTADF----YFTKNYPNIKLLKFEQNTETFL 185 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 A ++ A D + L A T P + + + K +APAI +G+ + ++ Sbjct: 186 ALLNNKAIALAHDNTLLLAW--TKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLEWLNNE 243 Query: 245 HYAMVTAEELG-ITQKNINQVSKDTTNPD 272 ++++++ L ++ + V D P+ Sbjct: 244 MDSLISSDFLKEAYKETLEPVYGDGIKPE 272 >gi|297380350|gb|ADI35237.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter pylori v225d] Length = 277 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 62/269 (23%), Positives = 116/269 (43%), Gaps = 10/269 (3%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F V I + S L IK+RG LK G+ + F V + G ++G+DV Sbjct: 13 FLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGYDVVIA 72 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 + ++ + D +KI+++P+ A R L++ ++DI+ N T RE + A Y Sbjct: 73 KRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKVVDFAK---PYM 129 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K I ++ +L + V GTT + YF + + FE+ E Sbjct: 130 KVALGVISKDGVIKNIEELKDKELIVNKGTTADF----YFTKNYPNIKLLKFEQNTETFL 185 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 A ++ A D + L A T P + + + K +APAI +G+ + + Sbjct: 186 ALLNNKAIALAHDNTLLLAW--TKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLEWLDNE 243 Query: 245 HYAMVTAEELG-ITQKNINQVSKDTTNPD 272 ++++++ L ++ + V D P+ Sbjct: 244 IDSLISSDFLKEAYKETLEPVYGDKIKPE 272 >gi|293375607|ref|ZP_06621881.1| bacterial extracellular solute-binding protein, family 3 [Turicibacter sanguinis PC909] gi|292645824|gb|EFF63860.1| bacterial extracellular solute-binding protein, family 3 [Turicibacter sanguinis PC909] Length = 279 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 66/283 (23%), Positives = 118/283 (41%), Gaps = 25/283 (8%) Query: 1 MYKDFF---VSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M K F +L L +L S + A + +I++ G + G+ + F V +N Sbjct: 1 MKKVFLCFMSFLLTLGVLGACGESNTSQSEARSIEEIQESGKIIIGVFSDKKPFGYVDSN 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 GD++G+DV F ++ + + ++Y+P+ A R L S ++DI+ N T R+ Sbjct: 61 GDYQGYDVYFGNRIAQDLGVE---VEYVPVEAASRVEYLVSNKVDIILANFTVTEERKEK 117 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + G + I+ V QL+G ++ V GTT E YF + + Sbjct: 118 VDFTL--PYMKVALGVVSPDDALITDVEQLNGKTLIVSKGTTAET----YFTENYPNVNL 171 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + F++ E A R DA + D + + A L N+ V + + S +A A+ +G Sbjct: 172 LKFDQYSEAYNALLDGRGDALSTDNTEVLAWALENE--GFSVGVESLGSIDTIAAAVQKG 229 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQ----VSKDTTNPD 272 + E W + +V + + + V D PD Sbjct: 230 NDELLE---WLNNEIVELGKEDFFHADYEETLAPVYGDAATPD 269 >gi|322374749|ref|ZP_08049263.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus sp. C300] gi|321280249|gb|EFX57288.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus sp. C300] Length = 293 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 59/266 (22%), Positives = 108/266 (40%), Gaps = 16/266 (6%) Query: 1 MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVK-ANGDWK 57 M K FF+S L + + + A + DI+KRG L G+ + F G + Sbjct: 30 MKKKFFLSALLISLFGLAATKPVQADTSVADIQKRGELVVGVKQDVPNFGYKDPKTGTYS 89 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G + D + ++ + K++Y+P+ A+ R L ++Q+D+ T R+ Sbjct: 90 GIETDLAKMIADEL---KVKVRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKLYNF- 145 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y D GF+++K I S+ L+G +I V G+ T+ + + K + + + Sbjct: 146 -TSPYYTDASGFLVNKSANIKSIEDLNGKTIGVAQGSITQRLITELGKKKGLTFKFVELG 204 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E+ + AHR DA++ D S L +L D S + +TE Sbjct: 205 SYPELITSLHAHRIDAFSVDRSILSGYISK-----RTELLNDSFKPSDYGIVTKKSNTEL 259 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQ 263 + + + G QK ++ Sbjct: 260 NDYLDNLVTKW---SKDGSLQKLYDR 282 >gi|308067189|ref|YP_003868794.1| Glutamine-binding protein precursor (GlnBP) [Paenibacillus polymyxa E681] gi|305856468|gb|ADM68256.1| Glutamine-binding protein precursor (GlnBP) [Paenibacillus polymyxa E681] Length = 276 Score = 204 bits (520), Expect = 2e-50, Method: Composition-based stats. Identities = 56/272 (20%), Positives = 112/272 (41%), Gaps = 27/272 (9%) Query: 1 MYKDF------FVSILCLIILFFTSFSTNASI----------LGDIKKRGFLKCGINTGL 44 M K F V++ CL++L A+ L IK+RG L G+ Sbjct: 1 MRKRFQWSTLVLVALSCLLVLAGCGGKEGAATSGNEPAAAKGLEAIKQRGKLVVGVKYDT 60 Query: 45 VGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103 F A+G +GFD+D +A++ IF D +K++ + +K R LQ+ ID + Sbjct: 61 KLFGLKDPASGKVEGFDIDIAKAVAKHIFGDETKLELKEVTSKTRITLLQNGDIDAIIAT 120 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLAD 162 + R+ + + + GQ ++ K I+ + L + + G+T+ + + Sbjct: 121 MTISDERKKQVDF--SDVYFNAGQSLLVKKGSPITGLESLTANTKVLAVKGSTSAKNIRE 178 Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222 + FE ++ A +A + +A T D S L ++ + ++++ + Sbjct: 179 KAPEA----TILEFENYQDAFNALKAGKGEALTTDNSILLGMQKQDPN---YILVGGNFT 231 Query: 223 KSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 + P A+ +G E ++ T + + E Sbjct: 232 EEPYGIAVKKGQPELLQAINDTLKELKSNGEY 263 >gi|317182426|dbj|BAJ60210.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter pylori F57] Length = 277 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 62/269 (23%), Positives = 116/269 (43%), Gaps = 10/269 (3%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F V I + S L IK+RG LK G+ + F V + G ++G+DV Sbjct: 13 FLVLITLVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGYDVVIA 72 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 + ++ + D +KI+++P+ A R L++ ++DI+ N T RE + A Y Sbjct: 73 KRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKVVDFAK---PYM 129 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K I ++ +L + V GTT + YF + + FE+ E Sbjct: 130 KVALGVISKDGVIKNIEELKDKELIVNKGTTADF----YFTKNYPNIKLLKFEQNTETFL 185 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 A + A D + L A T P + + + K +APAI +G+ + ++ Sbjct: 186 ALLNDKAIALAHDNTLLLAW--TKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLEWLNNE 243 Query: 245 HYAMVTAEELG-ITQKNINQVSKDTTNPD 272 ++++++ L ++ + V D P+ Sbjct: 244 MDSLISSDFLKEAYKETLEPVYGDGIKPE 272 >gi|237731337|ref|ZP_04561818.1| cysteine transporter [Citrobacter sp. 30_2] gi|226906876|gb|EEH92794.1| cysteine transporter [Citrobacter sp. 30_2] Length = 276 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 64/276 (23%), Positives = 106/276 (38%), Gaps = 15/276 (5%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDV 61 K +++ L+ T A L DIK G +K F V A G+DV Sbjct: 9 KKTLLALGVLLASGLTVSQVQADQLADIKAAGVVKVATFDANPPFGSVDAKTHKIVGYDV 68 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 DF AL+ ++ K++ + N R LQS + D++ + T R + Sbjct: 69 DFAEALAKSLG---VKLELVATNPANRIPLLQSGKADLIVADITITPERAQVIDF--SVP 123 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + GQ F++ K + + S A I GTT E L F + + ++ + Sbjct: 124 YFVTGQQFLVPAKSPDK-LDEYSKARIGAVKGTTGEQALHQRFP----QSRVLAYDDIPL 178 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A R A T D + L L ++ ILPD++SK + + +G+ V Sbjct: 179 ALTALRNGNVQAITQDSTILAGLLGAAPDKADFKILPDLLSKEEIGVGVKKGEPALLKAV 238 Query: 242 SWTHYAMVTAEELGITQKNIN-QVSKDTTNPDVQRF 276 + ++ E G K + +T NP + F Sbjct: 239 ND---ELLKLESTGQAAKIYDVWFGPETKNPQARAF 271 >gi|121593036|ref|YP_984932.1| extracellular solute-binding protein [Acidovorax sp. JS42] gi|120605116|gb|ABM40856.1| amino acid ABC transporter substrate-binding protein, PAAT family [Acidovorax sp. JS42] Length = 299 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 56/275 (20%), Positives = 110/275 (40%), Gaps = 11/275 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + ++ ++F+ L IK G + G+ G NG + GF Sbjct: 1 MKKHLLAAAITVLAAG-SAFAQANDTLAKIKSTGAVTLGVRESS-GLGYTLGNGKYVGFH 58 Query: 61 VDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 + + + I +I+Y P+ ++ R + + +DI +T R+ + Sbjct: 59 TEMGERILADIQKQLGLANMEIKYQPVTSQNRIPLVTNGTVDIECGSTTNNTARQKEVAF 118 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 A TY + ++ K GI+ + L+G +I GTT+ TL + +A + + ++ Sbjct: 119 AV--TTYVEEVRIAVNAKSGITGIKDLNGKTIVTTTGTTSVQTLRKHKRADGLNFKEVMG 176 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + R DA+ D S L A + PS+ I+ +++S P+A I + D Sbjct: 177 KDHADSFLMLETGRADAFIMDGSILAANISKSKNPSDFKIVGEVLSVEPIACMIRKDDPA 236 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + V + + G K ++ P Sbjct: 237 FKKAVDDSIKRQIA---DGSLAKLYDKWFMQPIPP 268 >gi|332108217|gb|EGJ09441.1| extracellular solute-binding protein [Rubrivivax benzoatilyticus JA2] Length = 295 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 98/268 (36%), Gaps = 14/268 (5%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI----FDDPSKIQYL 81 L +K G + + F+ + GF + C + + K+ Sbjct: 25 TLDKVKASGAIGVAYRESSIPFSYLDDKAQPVGFGFEICGRIVDEVKKVTGRPDLKVNLQ 84 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 + + R L + IDI +T R + A ++ G F++ GI S++ Sbjct: 85 SVTSANRIPLLVNGTIDIECGSTTNNSDRAKQVAFAIN--YFYTGTRFLVRSDSGIKSLA 142 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L+G + GTT L + + + I + E ++ R A+ D L Sbjct: 143 DLNGKVLVSTTGTTNFRILRNLISENKLPIELIGAKDHAEAALLVQSGRAAAFGMDDILL 202 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 Y L+ ++ P+E ++ + I P A + + D + +V ++ + E +K Sbjct: 203 YGLRASSANPAELAVVGESIQVEPYAIMVRKDDPAFKQLVDGVLAGLMKSGE---FEKLY 259 Query: 262 NQVSKDTTNPDVQRFLGIDKSSNIGEAL 289 + P GI ++ +G+ L Sbjct: 260 RKWFLSPIPPK-----GIVLNAPMGKEL 282 >gi|307706136|ref|ZP_07642955.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus mitis SK321] gi|307618536|gb|EFN97684.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus mitis SK321] Length = 264 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 60/266 (22%), Positives = 109/266 (40%), Gaps = 16/266 (6%) Query: 1 MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVK-ANGDWK 57 M K FF+S + + + + A + DI+KRG L G+ + F G + Sbjct: 1 MKKKFFLSAILISLFGLAAAKPVQADTSVADIQKRGELVVGVKQDVPNFGYKNPKTGTYS 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G + D + ++ + KI+Y+P+ A+ R L ++Q+D+ T R+ Sbjct: 61 GIETDLAKMVADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKLYNF- 116 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y D GF+++K I S+ L+G +I V G+ T+ + + K + + + Sbjct: 117 -TSPYYTDASGFLVNKSAKIKSIEDLNGKTIGVAQGSITQRLITELGKKKGLTFKFVELG 175 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E+ + AHR DA++ D S L V+L D S + +TE Sbjct: 176 SYPELITSLHAHRIDAFSVDRSILSGYISK-----RTVLLDDSFKPSDYGIVTKKSNTEL 230 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQ 263 + + + G QK ++ Sbjct: 231 NDYLDNLVTKW---SKDGSLQKLYDR 253 >gi|322833092|ref|YP_004213119.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602] gi|321168293|gb|ADW73992.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602] Length = 280 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 65/282 (23%), Positives = 113/282 (40%), Gaps = 14/282 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59 M + L L I ++F+ +A L DIKK G +K F + A D G+ Sbjct: 11 MTTSKIAAGLVLAISTLSTFTAHADQLADIKKAGVVKVATFDSNPPFGSLDAKTHDIVGY 70 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVDF +AL+ + K+Q +P N R LQS + D++ + T R + Sbjct: 71 DVDFAKALAKTLG---VKLQLVPTNPANRIPLLQSGKADLIVADITITPERAKVIDF--S 125 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ F++ + + A I GTT E L + F + + ++ + Sbjct: 126 VPYFVTGQQFLVPAGSPDK-LDAYATARIGAVKGTTGEQELHNRFP----QSRVLSYDDI 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +A R A T D + L L +++ +LP+++SK + + +G+T Sbjct: 181 PLALSALRNGNVQAITQDSTILAGLLDGAPDKAKYKVLPELLSKEEIGVGVKKGETSLLK 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDK 281 +V+ ++ E+ G N T R I+ Sbjct: 241 VVND---ELLNLEKNGQAVSIYNVWFGPQTKSPQPRLFKIEA 279 >gi|221209879|ref|ZP_03582860.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia multivorans CGD1] gi|221170567|gb|EEE03033.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia multivorans CGD1] Length = 317 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 53/277 (19%), Positives = 92/277 (33%), Gaps = 11/277 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTN--ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + F + + L + L IK G + GI V F+ G Sbjct: 20 MDRRFRWAAVALSCALAGAAHAQALTGTLKKIKDTGVVSLGIRESSVPFSYSDNQQKNIG 79 Query: 59 FDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + D + + D ++ +P+ ++ R LQ+ ID +T TL R+ Sbjct: 80 YSRDIAARIIDQLKTDLNLPGLTVKEIPITSQNRIPLLQNGTIDFECGSTTNTLERQKQA 139 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + Y G F K G+ L+G ++ AGT+ E L + M I Sbjct: 140 AFSNSIFLY--GIRFSTRKDSGVKDFPDLAGKTVATTAGTSDERLLRKLNEEKGMNMTII 197 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + E R A+ D LY + P + + + A + + D Sbjct: 198 SAKDHAEAFMNVTTGRAVAFVMDEPLLYGEIAKDRNPGAYTVTGTPLMHENYACMMRKDD 257 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + +V M T+ E +K ++ P Sbjct: 258 PAFKRVVDGVIAKMQTSGE---AEKLYDRWFTQPIPP 291 >gi|188527957|ref|YP_001910644.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter pylori Shi470] gi|188144197|gb|ACD48614.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter pylori Shi470] Length = 277 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 62/269 (23%), Positives = 116/269 (43%), Gaps = 10/269 (3%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F V I + S L IK+RG LK G+ + F V + G ++G+DV Sbjct: 13 FLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGYDVIIA 72 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 + ++ + D +KI+++P+ A R L++ ++DI+ N T RE + A Y Sbjct: 73 KRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKVVDFAK---PYM 129 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K I ++ +L + V GTT + YF + + FE+ E Sbjct: 130 KVALGVISKDGVIKNIEELKDKELIVNKGTTADF----YFTKNYPNIKLLKFEQNTETFL 185 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 A ++ A D + L A T P + + + K +APAI +G+ + + Sbjct: 186 ALLDNKAIALAHDNTLLLAW--TKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLEWLDNE 243 Query: 245 HYAMVTAEELG-ITQKNINQVSKDTTNPD 272 ++++++ L ++ + V D P+ Sbjct: 244 MDSLISSDFLKEAYKETLEPVYGDKIKPE 272 >gi|310639894|ref|YP_003944652.1| abc transporter, periplasmic glutamine-binding protein [Paenibacillus polymyxa SC2] gi|309244844|gb|ADO54411.1| ABC transporter, periplasmic glutamine-binding protein [Paenibacillus polymyxa SC2] Length = 276 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 57/272 (20%), Positives = 111/272 (40%), Gaps = 27/272 (9%) Query: 1 MYKDF------FVSILCLIILFFTSFSTNASI----------LGDIKKRGFLKCGINTGL 44 M K F V++ CL++L A+ L IK+RG L G+ Sbjct: 1 MRKRFQWSTLVLVALTCLLVLAGCGGKQEAATSGNEAAASNGLEAIKQRGKLVVGVKYDT 60 Query: 45 VGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103 F A+G +GFD+D +A++ IF D +K++ + +K R LQ+ ID + Sbjct: 61 KLFGLKDPASGKVEGFDIDIAKAVAKHIFGDETKLELKEVTSKTRITLLQNGDIDAIIAT 120 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLAD 162 + R+ + + + GQ ++ K I+ + L+ + G+T+ + + Sbjct: 121 MTISDERKKQVDF--SDVYFNAGQSLLVKKGSPITGLESLTPDTKVLAVKGSTSAKNIRE 178 Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222 + FE ++ A +A + A T D S L ++ + + ++ + Sbjct: 179 KAPKA----TILEFENYQDAFNALKAGKGQALTTDNSILLGMQQQDPN---YTLVGGNFT 231 Query: 223 KSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 + P A+ +G TE ++ T + + E Sbjct: 232 EEPYGIAVKKGQTELLQAINDTIKELKSNGEY 263 >gi|229541938|ref|ZP_04430998.1| extracellular solute-binding protein family 3 [Bacillus coagulans 36D1] gi|229326358|gb|EEN92033.1| extracellular solute-binding protein family 3 [Bacillus coagulans 36D1] Length = 271 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 60/269 (22%), Positives = 108/269 (40%), Gaps = 20/269 (7%) Query: 6 FVSILCLIILFF--------TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDW 56 V IL ++ S S + + I+ RG L G+ F G+ Sbjct: 12 LVFILAAALVAGCGKSKSTGGSGSASDDPIKKIEDRGKLVVGVKYDTYLFGYKDPKTGNV 71 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +GFDVD +A+S IF D K++ + +K R LQ+ +D++ + R+ + Sbjct: 72 EGFDVDIAKAISKKIFGDKVKVELKEVTSKTRIPMLQNGDVDMVVATMTISPDRKKVVDF 131 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + + GQ ++ K I SV L G + G T+ D + + Sbjct: 132 --SDVYFDAGQSLLVKKGSKIKSVKDLTKGTKVLTVKGATS----GDNVRKAAPDTTVLE 185 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 +E +E A ++ + DA T D S LY + + + ++ +K P A+ +G+T Sbjct: 186 YENYQEAFTALKSGKGDALTTDNSILYGMAAQDSN---YQVVGGTFTKEPYGIAMKKGNT 242 Query: 236 EWYNIVSWTHYAMVTAEEL-GITQKNINQ 263 + V+ + + E I K I + Sbjct: 243 KLVKAVNKALKELKDSGEYDKIKNKWIKE 271 >gi|325978425|ref|YP_004288141.1| amino acid ABC transporter substrate binding protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325178353|emb|CBZ48397.1| amino acid ABC transporter, substrate binding protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 292 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 66/258 (25%), Positives = 111/258 (43%), Gaps = 18/258 (6%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 + A L +IK+ G +K G+ + F V GD++G+DV F L+ + D + Sbjct: 39 GNTAKARTLDEIKESGTIKIGVFSDKKPFGYVDDKGDYQGYDVYFADRLAKDLGVD---V 95 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 +Y+ ++ R L S ++DI+ N T R + A G + + IS Sbjct: 96 EYVAVDPASRVEYLTSAKVDIILANFTVTDERAEQVDFAL--PYMKVALGVVSPSSQLIS 153 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 SV L G ++ V GTT E YF+ + K + + +++ E A R DA + D Sbjct: 154 SVDDLEGKTLIVGKGTTAET----YFEKNYPKVNLLKYDQYSEAYQALLDGRGDALSTDN 209 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 + + A L N V + + +APA+ +G+T + W + + T E Sbjct: 210 TEVLAWALENK--GYEVGITSLGDTDTIAPAVQKGNTALLD---WINDEIKTLGEENFFH 264 Query: 259 KNINQ----VSKDTTNPD 272 K+ + V D NPD Sbjct: 265 KDYEETLEPVYGDAANPD 282 >gi|77461510|ref|YP_351017.1| extracellular solute-binding protein [Pseudomonas fluorescens Pf0-1] gi|77385513|gb|ABA77026.1| amino acid ABC transporter substrate-binding protein, PAAT family [Pseudomonas fluorescens Pf0-1] Length = 300 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 54/272 (19%), Positives = 105/272 (38%), Gaps = 11/272 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTN---ASILGDIKKRGFLKCGINTGLVGFAEV-KANGDW 56 M K + ++ + ++ LG + + G V F+ V G Sbjct: 1 MQKITLLGCTLALVFGAQAQASEVPLTGTLGKVASANSITLGYRDASVPFSYVGDHTGQP 60 Query: 57 KGFDVDFCRALSSAIFD----DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G+ V+ + I K++Y + ++ R +Q+ +D+ +T T R+ Sbjct: 61 MGYSVELADKIVERIKQQLALPELKVKYNLVTSQTRIPLVQNGTVDLECGSTGVTAERQK 120 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + ++ I Y GQ GI S L G ++ AGTT E L Y H + Sbjct: 121 QVAFSYGFI-YVKGQLLTAR-DSGIQSFDDLRGKNVVTTAGTTNERYLKSYNLDHKLNMF 178 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 I + E ++ R A+ D + LY + P V++ + S+ + + + Sbjct: 179 VISAKDHGEAFQMLQSGRAAAFYMDDALLYGERAKARDPHNWVVVGEEQSREIYSCMVRK 238 Query: 233 GDTEWYNIVSWTHYAMVTAEEL-GITQKNINQ 263 D ++ +V+ + ++ E+ GI +K Q Sbjct: 239 DDPQFLALVNGVLADLYSSGEINGIYRKWFEQ 270 >gi|37525274|ref|NP_928618.1| glutamate and aspartate transporter subunit [Photorhabdus luminescens subsp. laumondii TTO1] gi|36784701|emb|CAE13601.1| Glutamate/aspartate transport system permease protein GltI [Photorhabdus luminescens subsp. laumondii TTO1] Length = 297 Score = 203 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 49/274 (17%), Positives = 103/274 (37%), Gaps = 9/274 (3%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 ++ ++++ L + L +K G + G V FA + G+ Sbjct: 3 MRNLVLTMMLLGMAGAAQAEELTGTLKKVKDDGVIIVGHRESSVPFAYYDNHQKVVGYSQ 62 Query: 62 DFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 D+ + A+ +++ +P+ ++ R LQ+ D +T L R+ + + Sbjct: 63 DYSNLIVEAVKKKLDMPNLQVKLIPVTSQNRIPLLQNGTYDFECGSTSNNLERQKQVTFS 122 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + + K GI L+G ++ V AGTT+E+ L +MK I + Sbjct: 123 NSI--FIITTRLLTKKGSGIKDFPDLAGKNVVVSAGTTSEILLNKLNDEKSMKMRIISAK 180 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + + R A+ D + L + +P + I+ S+ + D ++ Sbjct: 181 DHGDSFRTLESGRAIAFMVDDALLAGERAKAKKPDQWEIVGTPQSREAYGCISRKDDLQF 240 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 ++ T V A+ G+ +K+ + K P Sbjct: 241 KKLIDETI---VQAQTSGVAEKSFERWFKHPIPP 271 >gi|221069701|ref|ZP_03545806.1| extracellular solute-binding protein family 3 [Comamonas testosteroni KF-1] gi|220714724|gb|EED70092.1| extracellular solute-binding protein family 3 [Comamonas testosteroni KF-1] Length = 293 Score = 203 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 49/282 (17%), Positives = 106/282 (37%), Gaps = 11/282 (3%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 ++LC + + +A L ++ G + V F+ + NG G V+ +A+ Sbjct: 6 TVLCAALGLGFLGAAHADTLAKVRDSGRITLAYRESSVPFSYLD-NGKPIGMTVELSQAV 64 Query: 68 SSAIFD----DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 + A+ ++++ + ++ R L + ID+ +T +R +G A + Sbjct: 65 AEAVKKVLNLPALEVRWQAVTSQNRMPLLANGTIDLECGSTTNNTVRAKEVGFAIN--HF 122 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 + G ++ K GI + + L G + + GTT L + ++ + + Sbjct: 123 YTGTRLLVKKSSGIQNYADLKGKTASITTGTTNLQVLRKANAEQGWGMNIVMAKDHADGF 182 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 R A+ D LY L P + ++ D + P A + + D ++ +V Sbjct: 183 LLVENDRAAAFGMDDILLYGLIANAKNPKDFHVVADALQVEPYACMLRKDDPQFKQLVDG 242 Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNI 285 M+ + G + ++ P LG+ S + Sbjct: 243 VIGDMMKS---GAFARLYDKWFMQPIPPK-NAALGLPMSEQL 280 >gi|224824035|ref|ZP_03697143.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum 2002] gi|224603454|gb|EEG09629.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum 2002] Length = 301 Score = 203 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 46/266 (17%), Positives = 98/266 (36%), Gaps = 8/266 (3%) Query: 4 DFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + +I+ +F+ + L IK+ G + G + F+ + ++ G+ + Sbjct: 6 SLMSAAALAVIVAHPAFAAGESGTLKKIKESGTIVLGYRDSSIPFSYLGSDQKPIGYSWE 65 Query: 63 FCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 A+ + + + +++ + ++ R +Q+ +D+ +T R+ + + Sbjct: 66 IANAVVERVKKELNMPNLEVKTNLVTSQTRIPLVQNGTVDLECGSTTNNPERQQQIDFSV 125 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + + K GI L G ++ V AG+T+E L M + I + Sbjct: 126 G--YFSASTRLLTRKTSGIKEFPDLKGKNVVVTAGSTSERLLRAMNAEKQMSMNVISAKD 183 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + E + R AY D L + P E V+ S + +GD E+ Sbjct: 184 IGESFLMLESGRSAAYMVDDVLLAGEIAKSKNPDEWVVTGKPQSFENYGCMMRKGDPEFK 243 Query: 239 NIVSWTHYAMVTAEELG-ITQKNINQ 263 +V T + + E+ I K Sbjct: 244 KVVDETIKGLFKSGEINKIYAKWFQS 269 >gi|6119888|gb|AAF04271.1|AF181878_1 amino acid binding protein [Helicobacter pylori] Length = 287 Score = 203 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 62/273 (22%), Positives = 118/273 (43%), Gaps = 10/273 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M+ F V I + S L IK+RG LK G+ + F V + G ++G+D Sbjct: 19 MWGLFLVLIALVFNACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGYD 78 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V + ++ + D +KI+++P+ A R L++ ++DI+ N T RE + A Sbjct: 79 VIIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKVVDFAK-- 136 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y ++ K I ++ +L + V GTT + YF + + FE+ Sbjct: 137 -PYMKVALGVISKDGVIKNIEELKDKELIVNKGTTADF----YFTKNYPDIKLLKFEQNT 191 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E A ++ A D + L A P + + + K +APAI +G+ + Sbjct: 192 ETFLALLNNKATALAHDNTLLLAWAKQ--HPEFKLGITSLGDKDVIAPAIKKGNPKLLEW 249 Query: 241 VSWTHYAMVTAEELG-ITQKNINQVSKDTTNPD 272 ++ ++++++ L ++ + V D P+ Sbjct: 250 LNNEMDSLISSDFLKEAYKETLAPVYGDEIKPE 282 >gi|322377820|ref|ZP_08052309.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus sp. M334] gi|321281243|gb|EFX58254.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus sp. M334] Length = 296 Score = 203 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 59/266 (22%), Positives = 108/266 (40%), Gaps = 16/266 (6%) Query: 1 MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVK-ANGDWK 57 M K FF+S L + + + A + DI+KRG L G+ + F G + Sbjct: 33 MKKKFFLSALLISLFGLAATKPVQADTSVADIQKRGELVVGVKQDVPNFGYKDPKTGTYS 92 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G + D + ++ + K++Y+P+ A+ R L ++Q+D+ T R+ Sbjct: 93 GIETDLAKMVADEL---KVKVRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKLYNF- 148 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y D GF+++K I S+ L+G +I V G+ T+ + + K + + + Sbjct: 149 -TSPYYTDASGFLVNKSAKIKSIEDLNGKTIGVAQGSITQRLITELGKKKGLTFKFVELG 207 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E+ + AHR DA++ D S L +L D S + +TE Sbjct: 208 SYPELITSLHAHRIDAFSVDRSILSGYTSK-----RTALLDDSFKPSDYGIVTKKSNTEL 262 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQ 263 + + + G QK ++ Sbjct: 263 NDYLDNLVTKW---SKDGSLQKLYDR 285 >gi|222109804|ref|YP_002552068.1| family 3 extracellular solute-binding protein [Acidovorax ebreus TPSY] gi|221729248|gb|ACM32068.1| extracellular solute-binding protein family 3 [Acidovorax ebreus TPSY] Length = 299 Score = 203 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 54/275 (19%), Positives = 109/275 (39%), Gaps = 11/275 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + ++ ++F+ L IK G + G+ G NG + GF Sbjct: 1 MKKHLLAAAITVLAAG-SAFAQANDTLAKIKSTGAVTLGVRESS-GLGYTLGNGKYVGFH 58 Query: 61 VDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 + + + I +I+Y P+ ++ R + + +DI +T R+ + Sbjct: 59 TEMGERILADIQKQLGLANMEIKYQPVTSQNRIPLVTNGTVDIECGSTTNNTARQKDVAF 118 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 A TY + ++ K GI+ + L+G +I GTT+ TL +A + + ++ Sbjct: 119 AV--TTYVEEVRIAVNAKSGITGIKDLNGKTIVTTTGTTSVQTLRKNKRADGLTFKEVMG 176 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + R DA+ D S L A + P++ I+ +++S P+A + + D Sbjct: 177 KDHADSFLMLETGRADAFIMDGSILAANISKSKNPADFKIVGEVLSVEPIACMLRKDDPA 236 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + V + + G K ++ P Sbjct: 237 FKKAVDDSIKRQIA---DGSLAKLYDKWFMQPIPP 268 >gi|322513416|ref|ZP_08066532.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Actinobacillus ureae ATCC 25976] gi|322120804|gb|EFX92674.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Actinobacillus ureae ATCC 25976] Length = 277 Score = 203 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 57/277 (20%), Positives = 117/277 (42%), Gaps = 16/277 (5%) Query: 3 KDFFVSILCLIILFFT-----SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 K + + L + S+ + IK G ++ G+ F V ANG + Sbjct: 8 KTLLATAIAAFALTACDNGNNAPSSAQDSVAQIKANGVIRIGVFGDKPPFGYVDANGKSQ 67 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDV+ + +++ + P K++++ A R L+S ++D++ N T R + + Sbjct: 68 GFDVEIAKEIANDLLGSPDKVEFVLTEAANRVKYLKSNKVDLILANFTKTPER--AEVVD 125 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F G + K I+ + QL G ++ V GTT + YF ++ + + + F+ Sbjct: 126 FAAPYMNVALGVVSPKGALITDLKQLEGKTLLVNKGTTGDA----YFTKNHPEINLLKFD 181 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + E A + R A D + ++A + P+ V + + +APA+ +G+ Sbjct: 182 QNTETFDALKDGRGVALAHDNALVWAWAK--ENPTFDVAIGSVGLAEQIAPAVQKGNQAL 239 Query: 238 YNIVSWTHYAMVTAEELG-ITQKNINQVSKDTTNPDV 273 +++ + +L +K + V D P++ Sbjct: 240 LEVINKEIAELKANGKLKAAYEKTLVPVYGD--KPEL 274 >gi|315634945|ref|ZP_07890227.1| ABC superfamily ATP binding cassette transporter, binding protein [Aggregatibacter segnis ATCC 33393] gi|315476497|gb|EFU67247.1| ABC superfamily ATP binding cassette transporter, binding protein [Aggregatibacter segnis ATCC 33393] Length = 284 Score = 203 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 61/278 (21%), Positives = 117/278 (42%), Gaps = 23/278 (8%) Query: 1 MYKDF--FVSILCLIILFFTSFS----------TNASILGDIKKRGFLKCGINTGLVGFA 48 M K F ++ +L + +S + +K+ G ++ G+ + F Sbjct: 1 MNKTFKKVTALFATALLAIGLTACNDKEGKTELATSSTIEQLKQAGKVRVGVFSDKPPFG 60 Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 V + G +GFDV+ +A++ + D +K +Y+ + A R L S ++DI+ N T Sbjct: 61 YVDSQGKSQGFDVEIAKAITKDLLGDENKAEYVLVEAANRVEYLTSNKVDIILANFTVTP 120 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168 R + + F G + I+ V+QL G ++ + GTT + YF + Sbjct: 121 AR--AEVVDFAKPYMKVALGVVSKDGAVITDVNQLKGKTLLINKGTTADA----YFTKNY 174 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 + FE+ E A R R DA D + L+A + V + ++ + +AP Sbjct: 175 PDIKLLKFEQNTETFEALRDGRGDALAHDNTLLFAWAK--ENSGFTVGVKNLGDQDFIAP 232 Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 A+ +GD E +W + + + G+ ++ + K Sbjct: 233 AVKKGDVELL---NWLNAEIENLGKQGVLKQAYEKTLK 267 >gi|226310804|ref|YP_002770698.1| glutamine ABC transporter substrate binding protein [Brevibacillus brevis NBRC 100599] gi|226093752|dbj|BAH42194.1| glutamine ABC transporter substrate binding protein [Brevibacillus brevis NBRC 100599] Length = 283 Score = 203 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 59/252 (23%), Positives = 105/252 (41%), Gaps = 12/252 (4%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPS 76 T + L IK+R G+ L F A G+ +GFD+D +A++ + D + Sbjct: 40 TPAAAGTGTLAKIKERDKFVVGVKYDLNLFGLKDPATGNVEGFDIDIAKAIAKKVLGDEN 99 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 KI+ + +K R L++ +ID + T R+ + + + GQ F++ K Sbjct: 100 KIELKEVTSKTRIPMLKNGEIDAIIATMTITEDRKKEVDF--SDVYFLAGQSFLVKKDSP 157 Query: 137 ISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I+ + + G I G+T+ + +A + FE E A +A + DA T Sbjct: 158 INGLKDMQKGMKIVTAKGSTSAKNI----RASAPDVEVLEFENYAEAFTALKAGQGDALT 213 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL- 254 D + LY + + + + + ++ P AI +GD E+ V+ M E Sbjct: 214 TDNALLYGMAKQDPN---YRVTEETFTEEPYGIAISKGDAEFVKTVNDLLKEMKENGEYD 270 Query: 255 GITQKNINQVSK 266 I +K I K Sbjct: 271 KIYEKWIGTKPK 282 >gi|161520627|ref|YP_001584054.1| extracellular solute-binding protein [Burkholderia multivorans ATCC 17616] gi|189353187|ref|YP_001948814.1| ABC-type polar amino acid transport system substrate-binding protein [Burkholderia multivorans ATCC 17616] gi|160344677|gb|ABX17762.1| extracellular solute-binding protein family 3 [Burkholderia multivorans ATCC 17616] gi|189337209|dbj|BAG46278.1| ABC-type polar amino acid transport system substrate-binding protein [Burkholderia multivorans ATCC 17616] Length = 298 Score = 203 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 53/277 (19%), Positives = 92/277 (33%), Gaps = 11/277 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTN--ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + F + + L + L IK G + GI V F+ G Sbjct: 1 MDRRFRWAAVALSCALAGAAHAQALTGTLKKIKDTGVVSLGIRESSVPFSYSDNQQKNIG 60 Query: 59 FDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + D + + D ++ +P+ ++ R LQ+ ID +T TL R+ Sbjct: 61 YSRDIAARIIDQLKTDLNLPGLTVKEIPITSQNRIPLLQNGTIDFECGSTTNTLERQKQA 120 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + Y G F K G+ L+G ++ AGT+ E L + M I Sbjct: 121 AFSNSIFLY--GIRFSTRKDSGVKDFPDLAGKTVATTAGTSDERLLRKLNEEKGMNMTII 178 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + E R A+ D LY + P + + + A + + D Sbjct: 179 SAKDHAEAFMNVTTGRAVAFVMDEPLLYGEIAKDRNPGAYTVTGTPLMHENYACMMRKDD 238 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + +V M T+ E +K ++ P Sbjct: 239 PAFKRVVDGVIAKMQTSGE---AEKLYDRWFTQPIPP 272 >gi|4588485|gb|AAD26123.1| antigenic protein [Actinobacillus pleuropneumoniae] Length = 278 Score = 203 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 59/278 (21%), Positives = 119/278 (42%), Gaps = 17/278 (6%) Query: 3 KDFFVSILCLIILFF------TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 K + + L ST + IK++G ++ G+ F V ANG Sbjct: 8 KTLLATAITAFALTACDNANNAQSSTAKDSVAQIKEKGVIRIGVFGDKPPFGYVDANGKS 67 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +GFDV+ + +++ + K++++ A R L+S ++D++ N T R + + Sbjct: 68 QGFDVEIAKEIANDLLGSSDKVEFVLTEAANRVEYLKSNKVDLILANFTKTPER--AEVV 125 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F G + K + IS + QL G ++ V GTT + YF ++ + + + F Sbjct: 126 DFAAPYMNVALGVVSPKVRLISDLKQLEGKTLLVNKGTTADA----YFTKNHPEINLLKF 181 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 ++ E A + R A D + ++A + P+ V + + +APA+ +G+ Sbjct: 182 DQNTETFDALKDGRGVALAHDNALVWAWAK--ENPTFDVAIGSVGPAEQIAPAVQKGNQA 239 Query: 237 WYNIVSWTHYAMVTAEELG-ITQKNINQVSKDTTNPDV 273 ++++ T +L +K + V D P++ Sbjct: 240 LLDVINKEIAEFKTNGKLKAAYEKTLVPVYGD--KPEL 275 >gi|317011370|gb|ADU85117.1| glutamine ABC transporter, periplasmic glutamine-binding protein (glnH) [Helicobacter pylori SouthAfrica7] Length = 277 Score = 203 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 61/269 (22%), Positives = 117/269 (43%), Gaps = 10/269 (3%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F V I + S L IK+RG LK G+ + F V + G ++G+DV Sbjct: 13 FLVLIALVFNACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGQYQGYDVVIA 72 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 + ++ + D +KI+++P+ A R L++ ++DI+ N T RE + A Y Sbjct: 73 KRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREAVVDFAK---PYM 129 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K I ++ +L + V GTT + YF + + FE+ E Sbjct: 130 KVALGVISKDGVIKNIEELKDKELIVNKGTTADF----YFTKNYPNIKLLKFEQNTETFL 185 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 A ++ A + D + L A P + + + K +APAI +G+ + ++ Sbjct: 186 ALLNNKAIALSHDNTLLLAWAKQ--HPEFKLGITSLGDKDVIAPAIKKGNPKLLEWLNNE 243 Query: 245 HYAMVTAEELG-ITQKNINQVSKDTTNPD 272 ++++++ L Q+ + + D P+ Sbjct: 244 IDSLISSDFLKEAYQETLAPIYGDEIKPE 272 >gi|241664919|ref|YP_002983279.1| family 3 extracellular solute-binding protein [Ralstonia pickettii 12D] gi|240866946|gb|ACS64607.1| extracellular solute-binding protein family 3 [Ralstonia pickettii 12D] Length = 301 Score = 203 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 49/262 (18%), Positives = 94/262 (35%), Gaps = 9/262 (3%) Query: 10 LCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 L L L A L I+ + G+ + F+ + + GF D C + Sbjct: 13 LALTSLLAIGAQAQALDGTLKKIQDSNTILIGVRESSIPFSYRDSKNEIVGFSADLCSRV 72 Query: 68 SSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 A+ K I+ +P+ ++ R +Q+ +D+ T RE + Sbjct: 73 IDAVKKKTGKPNLDIKQIPVTSQNRTSLVQNGSVDLECGVTTHLKSREQQTAF--STTFF 130 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 G + + K G+ L+G S+ AGTT+E L M + I + E Sbjct: 131 IAGTRLLTNVKSGVKDFPDLAGKSVITNAGTTSERILRKMNDEKKMNMNVISGKDYGESF 190 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 ++ R A+ D L + +P + V+ S + + D ++ +V Sbjct: 191 LTLQSGRVAAFMMDDVLLAGARTLAQKPDDWVVTGTPQSFEAYGFMLRRDDPQFKKLVDD 250 Query: 244 THYAMVTAEELG-ITQKNINQV 264 T ++ + E+ + K + Sbjct: 251 TMTGVMKSGEIKALYAKWFEKA 272 >gi|296156268|ref|ZP_06839107.1| extracellular solute-binding protein family 3 [Burkholderia sp. Ch1-1] gi|295893774|gb|EFG73553.1| extracellular solute-binding protein family 3 [Burkholderia sp. Ch1-1] Length = 272 Score = 203 bits (518), Expect = 3e-50, Method: Composition-based stats. Identities = 64/273 (23%), Positives = 103/273 (37%), Gaps = 14/273 (5%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFC 64 + + L S + +A L DIKK G L+ F V G D+D+ Sbjct: 5 VLGAVIAGSLLVMSAAAHADRLDDIKKAGVLRVAAFDSNPPFGFVDPKSNQIVGLDIDYA 64 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 RA+++ + K++ P N R L+S ++D++ N T R+ + + I YF Sbjct: 65 RAVANRLG---VKLEIQPTNPANRIAFLKSGKVDLVFANFTITDDRKKEVDFS---IPYF 118 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 + KK ++S QL+G I GTT E + F I ++ A Sbjct: 119 ASGTQFIAKKGTLTSPQQLNGLRIGADKGTTNEQQVRAQFPGA----TIIAYDDTPFAFA 174 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 A R A T D L AL + + I P IS + +G+T N+V+ T Sbjct: 175 ALRTGNVQAITQDGPKLVALLAKVPDKANYEIPPFTISNDYEGVGVPKGETRLLNVVNDT 234 Query: 245 HYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277 E G + + + + R Sbjct: 235 LK---DLEAKGTAGQIYDTWFGPKSAAPLPRLF 264 >gi|93005165|ref|YP_579602.1| extracellular solute-binding protein [Psychrobacter cryohalolentis K5] gi|92392843|gb|ABE74118.1| extracellular solute-binding protein, family 3 [Psychrobacter cryohalolentis K5] Length = 330 Score = 203 bits (518), Expect = 3e-50, Method: Composition-based stats. Identities = 52/267 (19%), Positives = 96/267 (35%), Gaps = 17/267 (6%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPS- 76 + + L IK+ G + G + F+ + G+ D + A+ + Sbjct: 46 ATANTNGTLDKIKESGTIVVGHRDSSIPFSYIADDPNQPIGYAHDLEMKVVEAVKQKLNM 105 Query: 77 ---KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 KI+Y + ++ R +Q+ +D +T R+ + + + G + K Sbjct: 106 PDLKIRYNLITSQTRIPLVQNGTVDFECGSTTNNEERQKQVAFSNG--FFEIGTRLLTKK 163 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 GI L G ++ AGTT+E + +Y M + I + E R DA Sbjct: 164 DSGIQGFDDLKGKTLVTTAGTTSERYIREYNDDKKMNINVISAKDHGEGFLMLENGRADA 223 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 + D L K P E VI+ + S + + D E+ +V + + E Sbjct: 224 FMMDDVLLAGEKAKAKNPDEWVIVGEPQSFEIYGCMMRKDDPEFKAVVDEALANVFKSGE 283 Query: 254 LG----------ITQKNINQVSKDTTN 270 + I KN+N + + N Sbjct: 284 INSIYDKWFLNPIPPKNVNLKFEMSDN 310 >gi|326315074|ref|YP_004232746.1| family 3 extracellular solute-binding protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323371910|gb|ADX44179.1| extracellular solute-binding protein family 3 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 305 Score = 203 bits (518), Expect = 3e-50, Method: Composition-based stats. Identities = 53/245 (21%), Positives = 104/245 (42%), Gaps = 8/245 (3%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDD 74 + + L IK+ G + G + F+ G + GF D C + A+ Sbjct: 24 GAAASAQEIDTLARIKQTGVITIGSRDSSIPFSYSPKGGSEPVGFSNDICLKIVDAVKAK 83 Query: 75 PS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130 ++QY LN+ R +Q+ +D+ T +++R +AF P + G Sbjct: 84 LGLPALRVQYTLLNSLNRIPLMQNGTVDLDCATTTNSVVR--QQMVAFAPSHFVAGITVA 141 Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190 + K GI+S+S L+G ++ AG+T+ L Y +A ++ + + + R Sbjct: 142 VKKNSGINSLSDLAGKTVATVAGSTSVQLLRTYKRAEALEVRELSGKDTADAFLLLANGR 201 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 DAY D L L ++ P E+ +L D ++ + P + D ++ +V T ++ Sbjct: 202 ADAYVLDDVQLAGLIASSPNPGEYRMLRDVVLRQEPYGIMFRKNDPQFEALVDETVTQLM 261 Query: 250 TAEEL 254 + ++ Sbjct: 262 KSGDM 266 >gi|186473553|ref|YP_001860895.1| extracellular solute-binding protein [Burkholderia phymatum STM815] gi|184195885|gb|ACC73849.1| extracellular solute-binding protein family 3 [Burkholderia phymatum STM815] Length = 302 Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats. Identities = 51/271 (18%), Positives = 94/271 (34%), Gaps = 9/271 (3%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 V+ CL + L I+ + G V F+ V +N GF D C Sbjct: 11 LCVAAPCLTTTTGAAAQETQPTLAKIEAANLIAIGHRETSVPFSYVDSNNQVIGFSQDLC 70 Query: 65 RALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 + A+ K ++++P+ ++ R +Q+ +D+ T R+ + Sbjct: 71 NRIIDAVKVKTHKPNLQVRFIPVTSQNRISLVQNGTVDLECGVTTNLTSRQNQVAF--GD 128 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + + K GI L+G ++ GTT+E L + M I + Sbjct: 129 TFFVATTRLLTRKDSGIKDFPDLAGKTVVTNQGTTSERILRKMNEEKKMNMQIISAKDYG 188 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E R AY D L + +P++ VI+ S + +GD + I Sbjct: 189 EGRMTLETGRAAAYMMDDVLLAGTRTLTAKPADWVIVGTPQSSEAYGFMLRKGDPAFLKI 248 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 V T ++ + E+ ++ P Sbjct: 249 VDDTLAQVMKSGEIDAM---YDKWFMKPVPP 276 >gi|152979602|ref|YP_001345231.1| extracellular solute-binding protein [Actinobacillus succinogenes 130Z] gi|150841325|gb|ABR75296.1| extracellular solute-binding protein family 3 [Actinobacillus succinogenes 130Z] Length = 288 Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats. Identities = 59/254 (23%), Positives = 110/254 (43%), Gaps = 11/254 (4%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + S + IK+ ++ G+ + F V +G +GFDV+ +AL+ + D +K+++ Sbjct: 37 AAKTSAVERIKQADKIRIGVFSDKPPFGYVDKDGKNQGFDVEIAKALTKDLLGDENKVEF 96 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + + A R L S +IDI N T R+ + A G + I+ V Sbjct: 97 VLVEAANRAEYLLSNKIDITLANFTVTPARQEVVAFAE--PYMKVALGVVSKDGAVITDV 154 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 QL G ++ V GTT + YF + + + FE+ E A R R DA D + Sbjct: 155 KQLEGKTLLVNKGTTADA----YFSKNFPQIKLLKFEQNTETFEALRDGRGDALAHDNAL 210 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L+A + P V + ++ +A A+ + D +++ W + M + G+ Q+ Sbjct: 211 LFAWAK--ENPGFTVGVKELGDLDFIAGAVRKED---KDLLEWLNAEMEKLGKEGVLQQA 265 Query: 261 INQVSKDTTNPDVQ 274 ++V ++ Sbjct: 266 YDKVLAPVYGDSIK 279 >gi|33591939|ref|NP_879583.1| extracellular solute-binding protein [Bordetella pertussis Tohama I] gi|33571583|emb|CAE41071.1| probable extracellular solute-binding protein [Bordetella pertussis Tohama I] Length = 304 Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats. Identities = 51/251 (20%), Positives = 96/251 (38%), Gaps = 9/251 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA----IFDDPSKIQY 80 L I G + G + F+ AN G+ +D C + A I D +++Y Sbjct: 29 GTLKKISDTGVITIGHRETSIPFSYYDANQKPVGYSIDICTRIVDAVKTRIKRDDIQVKY 88 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 LP+ + R + + ID+ +T TL + +AF T+ G FI K + ++ Sbjct: 89 LPVTSATRIPLMGNGTIDLECASTSNTL--DCQKQVAFSVTTFVTGNRFISLKSANLKTI 146 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L G ++ +GT + +A ++ + + E R A+ D Sbjct: 147 DDLKGKTVASTSGTANIRQANEINEARSLGMKVVPVKEHAEGFLMVETGRAAAFIMDDIL 206 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 LY L P + + D +S P A + + D ++ +V T ++ + G + Sbjct: 207 LYGLAANAKEPDRYQVSGDSLSIEPYAIMLRRDDPQFKALVDDTIKSLYAS---GDFEAL 263 Query: 261 INQVSKDTTNP 271 + + P Sbjct: 264 YKRWYQSPLPP 274 >gi|218887872|ref|YP_002437193.1| extracellular solute-binding protein family 3 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758826|gb|ACL09725.1| extracellular solute-binding protein family 3 [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 275 Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats. Identities = 62/276 (22%), Positives = 114/276 (41%), Gaps = 14/276 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M +++ + + S + + I+K ++ GI T + A G+W GFD Sbjct: 1 MRLVKLLAMASALTVLMASVAMAGPVFDRIQKEKKIRIGIMTDSIPGAFYNEKGEWGGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D ++ + + ++Q +N K R +QS QID+ N T R+ S+ + Sbjct: 61 YDMATEVAKRMGVEIERVQ---VNNKTRIALVQSGQIDLSVSNMTHTRERDKSVDFSL-- 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH---NMKYHPIVFE 177 +FDGQ + K + SV + G I GTT+E+ + K N + + I F+ Sbjct: 116 TYFFDGQKILAKKGQ-FKSVKDMVGKKIATMQGTTSEVNVRRALKEAGDPNAETNVISFQ 174 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + E A + R ++ D S L P + ++ D +S P A+ Q D+ Sbjct: 175 KESECFQALQNGRVAGWSTDASILVGYAA--KTPGQFELVGDFLSDEPYGMAMPQDDSAL 232 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 + V+ A+ + G + N+ T ++ Sbjct: 233 RDAVN---AAIQDMWKDGTYKSIYNKWYGPGTPFEM 265 >gi|170696121|ref|ZP_02887256.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] gi|170138936|gb|EDT07129.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] Length = 272 Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats. Identities = 66/273 (24%), Positives = 103/273 (37%), Gaps = 14/273 (5%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFC 64 + + L S + +A L DIKK G L+ F V G DVD+ Sbjct: 5 VLGAVIAGSLLVMSAAAHADRLDDIKKAGVLRVAAFDSNPPFGFVDPKSNQIVGLDVDYA 64 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 RAL++ + K++ P N R L+S ++D++ N T R+ + + I YF Sbjct: 65 RALATRLG---VKLEIQPTNPANRIAFLKSGKVDLVFANFTITDDRKKEVDFS---IPYF 118 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 + KK ++S QL+G I GTT E + F + I ++ A Sbjct: 119 ASGTQFIAKKGTLTSPQQLNGLRIGADKGTTNEQQVRAQFPSA----TIIAYDDTPFAFA 174 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 A R A T D L AL + + I P IS + +G+T N+V+ T Sbjct: 175 ALRTGNVQAITQDGPKLVALLAKVPDKANYEIPPFTISNDYEGVGVPKGETRLLNVVNDT 234 Query: 245 HYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277 E G + + + R Sbjct: 235 LK---DLEAKGTAGTIYDTWFGPKSAAPLPRLF 264 >gi|257092714|ref|YP_003166355.1| family 3 extracellular solute-binding protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045238|gb|ACV34426.1| extracellular solute-binding protein family 3 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 301 Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats. Identities = 50/271 (18%), Positives = 93/271 (34%), Gaps = 12/271 (4%) Query: 1 MYK---DFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M+K F ++ L + L IK G + G + F+ Sbjct: 1 MFKVSRRFAIAATLSAALLSAPVAAQELTGTLKKIKDTGVITLGHRESSIPFSYYDDKQQ 60 Query: 56 WKGFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G+ + AI D ++ +P+ + R +Q+ +D+ +T R+ Sbjct: 61 VIGYSHEMMLKAVEAIKADLKLAKLDVKLMPVTSANRITLVQNGSVDLECGSTTNNTERQ 120 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 + + + G + GI+ L+G ++ AGTT+E L + MK Sbjct: 121 KQVSFSNSI--FIIGTRLMTKTNSGINDFPDLAGKNVVTTAGTTSERLLRKMNEDKQMKM 178 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + I + E R A+ D + LY + S+ V++ S + Sbjct: 179 NVISAKDHGESFLTLETGRAVAFMMDDALLYGEMAKAKKASDWVVVGTPQSYEAYGCMLR 238 Query: 232 QGDTEWYNIVSWTH-YAMVTAEELGITQKNI 261 + D + +V AM + E I K Sbjct: 239 KDDPAFKKVVDGALAKAMTSGEAEKIYAKWF 269 >gi|308062450|gb|ADO04338.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter pylori Cuz20] Length = 277 Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats. Identities = 62/269 (23%), Positives = 116/269 (43%), Gaps = 10/269 (3%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F V I + S L IK+RG LK G+ + F V + G ++G+DV Sbjct: 13 FLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGYDVIIA 72 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 + ++ + D +KI+++P+ A R L++ ++DI+ N T RE + A Y Sbjct: 73 KRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKVVDFAK---PYM 129 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K I ++ +L + V GTT + YF + + FE+ E Sbjct: 130 KVALGVISKDGAIKNIEELENKELIVNKGTTADF----YFTKNYPNIKLLKFEQNTETFL 185 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 A ++ A D + L A T P + + + K +APAI +G+ + + Sbjct: 186 ALLNNKAIALAHDNTLLLAW--TKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLEWLDNE 243 Query: 245 HYAMVTAEELG-ITQKNINQVSKDTTNPD 272 ++++++ L ++ + V D P+ Sbjct: 244 MDSLISSDFLKEAYKETLEPVYGDGIKPE 272 >gi|229593102|ref|YP_002875221.1| putative ABC transporter substrate-binding exported protein [Pseudomonas fluorescens SBW25] gi|229364968|emb|CAY53090.1| putative ABC transport system, substrate-binding exported protein [Pseudomonas fluorescens SBW25] Length = 300 Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats. Identities = 56/272 (20%), Positives = 105/272 (38%), Gaps = 11/272 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEV-KANGDW 56 M K ++L + + A LG I + G V F+ V +G Sbjct: 1 MKKILLAGCTLGLLLGAQAHANPAPLDGTLGKIANAQSITLGYRDASVPFSYVGDNSGKP 60 Query: 57 KGFDVDFCRALSSAI----FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G+ V+ + I ++Y + ++ R +Q+ +D+ +T T R+ Sbjct: 61 MGYSVELADKIVERIRQKTGVATLNVKYTLVTSQTRIPLVQNGTVDLECGSTGVTAERQK 120 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + ++ I Y GQ + K GI + L+G ++ AGTT E L Y H Sbjct: 121 QVAFSYGFI-YVKGQ-LLTAKDSGIQGFADLAGKNVVTTAGTTNERFLKSYNAEHKANMF 178 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 I + E R A+ D + LY + P V++ + S+ + + + Sbjct: 179 VISAKDHGEAFKMLETGRAAAFYMDDALLYGERAKAKDPHNWVVVGEEQSREIYSCMVRK 238 Query: 233 GDTEWYNIVSWTHYAMVTAEEL-GITQKNINQ 263 D+++ +V+ T + + E+ GI Q+ Sbjct: 239 DDSQFLAVVNETLGDLYRSGEINGIYQRWFES 270 >gi|94311476|ref|YP_584686.1| extracellular solute-binding protein [Cupriavidus metallidurans CH34] gi|93355328|gb|ABF09417.1| ABC-type transporter, periplasmic component, probable glutamate and aspartate transporter [Cupriavidus metallidurans CH34] Length = 310 Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats. Identities = 55/274 (20%), Positives = 110/274 (40%), Gaps = 12/274 (4%) Query: 4 DFFVSILCLIILFFTSFST--NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 F+S+ L+ + ++ ++ I++ G ++ V F+ + A+G G+ V Sbjct: 17 SVFLSLAALLTPAAIPAAQAASSPVIQRIQQTGTIRIAHRESSVPFSFI-ADGKPVGYAV 75 Query: 62 DFCRALSSA----IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 D C + A + +++++P+ R A+ + D+ +T RE +A Sbjct: 76 DLCLKAADAVRAQLKMPQLRVEWVPVTPATRIPAIVDGKADLECGSTTNN--RERREQVA 133 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F Y G ++ GI S L G ++ GTT + ++ M + + + Sbjct: 134 FTIPHYIAGSRMLVKSDSGIRRWSDLRGKTVVSTTGTTPLAMIRKMDESGAMGWKVLEAK 193 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E A + R DA+ D L+ L+ P+ + D+++ P A + + D E+ Sbjct: 194 DHAEAFAMVESGRADAFVMDDVLLFGLRANAKNPASLAVTGDLLTIEPYAIMLSKQDAEF 253 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 IV + +E TQK + + P Sbjct: 254 KKIVDKALVNAIYDQE---TQKLYRKWFQQPIPP 284 >gi|109947011|ref|YP_664239.1| polar amino acid transport system substrate-binding protein [Helicobacter acinonychis str. Sheeba] gi|109714232|emb|CAJ99240.1| polar amino acid transport system substrate-binding protein [Helicobacter acinonychis str. Sheeba] Length = 277 Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats. Identities = 58/276 (21%), Positives = 122/276 (44%), Gaps = 13/276 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 ++K + + ++ + ++F ++ L IK+RG LK G+ + F V + G ++ Sbjct: 6 LFKAWGLFLILIALVFNACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQ 65 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G+DV + + + D +KI+++P+ A R L++ ++D++ N T RE + A Sbjct: 66 GYDVVIAKRIVLDLLGDENKIEFIPVEASARVEFLKANKVDVIMANFTCTKEREAVVDFA 125 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y ++ K I ++ +L + V GTT + YF + + FE Sbjct: 126 K---PYMKVALGVISKDGAIKNIEELKDKELIVNKGTTADF----YFTKNYPHIKLLKFE 178 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + E A + A D + L A P + + ++ K +APAI +G+ + Sbjct: 179 QNTETFLALLKDKAIALAHDNTLLLAWAKQ--HPEFKLGITNLGDKDVIAPAIKKGNPKL 236 Query: 238 YNIVSWTHYAMVTAEELG-ITQKNINQVSKDTTNPD 272 ++ +++++ L Q+ + + D P+ Sbjct: 237 LEWLNNEIDSLISSGFLKEAYQETLAPIYGDGIKPE 272 >gi|319791997|ref|YP_004153637.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] gi|315594460|gb|ADU35526.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] Length = 300 Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats. Identities = 53/276 (19%), Positives = 112/276 (40%), Gaps = 13/276 (4%) Query: 4 DFFVSILCLIILFFTSFSTNAS---ILGDIKKRGFLKCGINTGLVGFAE-VKANGDWKGF 59 ++ + L FT + +A L IK+ G ++ G + F+ + A+ G+ Sbjct: 5 KLPSALALGLTLAFTCGAASAQDGGTLQKIKESGTIQIGARDSQIPFSYKLSADSAPIGY 64 Query: 60 DVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 D C + A+ +++Y LN+ R LQ+ +D+ T T R+ + Sbjct: 65 TNDICLKIVDAVKAKLGLSKIEVRYTMLNSTNRIPLLQNGTVDLDCATTTNTTQRQAQVD 124 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 A P + + K GI+++S L+G ++ +G+T+ L K+ ++ + I Sbjct: 125 FA--PSHFVTNITAAVRKNSGINALSDLNGKNVATVSGSTSIQLLRGARKSGTIEVNEIA 182 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + R DAY D L + + P E+ +L + + + P + + D Sbjct: 183 GKDTSDGFLLLSTGRADAYVLDDVQLAGMIASATNPGEYKLLKESLRQEPYGIMLRKDDP 242 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 ++ +V T ++ + G ++ + P Sbjct: 243 QFKALVDETVTGLMKS---GAIEQLYAKWFMSPVPP 275 >gi|295698917|ref|YP_003606810.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] gi|295438130|gb|ADG17299.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] Length = 272 Score = 203 bits (516), Expect = 4e-50, Method: Composition-based stats. Identities = 65/285 (22%), Positives = 105/285 (36%), Gaps = 15/285 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 M F V + +L S + +A L DIKK G L+ F G Sbjct: 1 MKIKF-VGAAVMGLLLAISGAAHADRLDDIKKAGVLRVATFDSNAPFGFADPKTNQIVGL 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD+ RA+++ + K++ P N R L+S ++D++ N T R+ + + Sbjct: 60 DVDYARAVANKLG---VKLEIQPTNPANRIAFLKSGKVDLVFANFTITDERKKEVDFS-- 114 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 YF + KK ++S Q++G + GTT E + F + ++ Sbjct: 115 -TPYFASGTQFIAKKGVLTSPQQVNGLRVGADKGTTNEQQVRAQFPNA----TIVAYDDT 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AA RA A T D L AL + + I P IS + +G+T + Sbjct: 170 PFAFAALRAGNVQAITQDGPKLVALLANVPDKANYEIPPFTISNDYEGVGVPKGETRLLS 229 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSN 284 +V T E G K + + + R I Sbjct: 230 VVDDTLKG---LEANGSAAKIYDHWFGPESRAPLPRLFKIGDPQK 271 >gi|220924346|ref|YP_002499648.1| family 3 extracellular solute-binding protein [Methylobacterium nodulans ORS 2060] gi|219948953|gb|ACL59345.1| extracellular solute-binding protein family 3 [Methylobacterium nodulans ORS 2060] Length = 301 Score = 203 bits (516), Expect = 4e-50, Method: Composition-based stats. Identities = 48/274 (17%), Positives = 94/274 (34%), Gaps = 10/274 (3%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K ++ + S L IK+ G + G V F+ + N G+ +D Sbjct: 4 KRLLPLLVAGLAAMPASAEELTGTLKKIKETGAITLGYRDSSVPFSYLDGNQKPVGYAMD 63 Query: 63 FCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 C + A+ + +++ P+ + R + + ID+ +T R+ + Sbjct: 64 ICYKIVEAVKAKLAMPNLEVKLNPVTSATRIPLMANGTIDLECGSTTNNAERQKQVAF-- 121 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + F+ K ++ L G ++ +GTT + +Y AH + + Sbjct: 122 TNTHFLTANRFVAKKASNVNKFEDLKGKTVVSTSGTTNIKQINEYNAAHKFGMTILPAKD 181 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-SPLAPAIIQGDTEW 237 E R A+ D L +L + P ++I D ISK P + + D + Sbjct: 182 HAEAFLMVETGRAVAFVMDDVLLASLAAGSKEPDAYMISKDAISKPEPYGIMLRKDDAPF 241 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + A + E T ++ P Sbjct: 242 KKVADEATAAFYRSPEGPAT---YDKWFTKPIPP 272 >gi|27382711|ref|NP_774240.1| ABC transporter amino-acid-binding protein [Bradyrhizobium japonicum USDA 110] gi|27355883|dbj|BAC52865.1| ABC transporter amino-acid-binding protein [Bradyrhizobium japonicum USDA 110] Length = 303 Score = 203 bits (516), Expect = 4e-50, Method: Composition-based stats. Identities = 52/275 (18%), Positives = 101/275 (36%), Gaps = 10/275 (3%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 ++ +++ ++ L +IK G + G + F+ + N GF + Sbjct: 4 FRHIGLALAATFVVSQAGAQELTGTLKNIKDTGAITLGFRDSSIPFSYLDDNQKPIGFAM 63 Query: 62 DFCRALSSAIFD----DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 D C + A+ D +++ P+ + R + + ID+ +T R+ + Sbjct: 64 DICYKIVDAVKKELKLDKLEVKLNPVTSATRIPLMANGTIDLECGSTTNNADRQKQVAF- 122 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + ++ K G+ S+ L G ++ AGTT L + A + + I + Sbjct: 123 -TNTHFLTASRYVFKKSSGLKSIDDLKGKTVVSTAGTTNIKQLTEANVAKGLGANIIPAK 181 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-SPLAPAIIQGDTE 236 E R A+ D L +L + P ++VI D SK P + + D Sbjct: 182 DHAESFLMVETDRAVAFVMDDILLASLVAGSKSPDDYVISKDAFSKPEPYGIMLRKDDAP 241 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + +V A+ T+ E QK + P Sbjct: 242 FKKVVDAATAALYTSGE---GQKIYEKWFTAKIPP 273 >gi|49474411|ref|YP_032453.1| amino-acid ABC transporter binding protein [Bartonella quintana str. Toulouse] gi|49239915|emb|CAF26313.1| Amino-acid ABC transporter binding protein [Bartonella quintana str. Toulouse] Length = 303 Score = 203 bits (516), Expect = 4e-50, Method: Composition-based stats. Identities = 59/276 (21%), Positives = 107/276 (38%), Gaps = 11/276 (3%) Query: 1 MYKDF--FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K F ++ ++ L IKK G + G+ G A NG + G Sbjct: 1 MKKSLSIFTAVTVTVMGLIGIAKAENDTLEKIKKTGEITLGVRESS-GLAYALGNGKYVG 59 Query: 59 FDVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 F + + I P KI YLP+ ++ R L++ D +T + S Sbjct: 60 FHTEMAERIIDDISKKIGKPVKIHYLPITSQNRIPLLKNSTYDFECGSTTNDVS--SSKE 117 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 AF TY + + K I S L+G ++ GTT+ + ++ N+ ++ + Sbjct: 118 AAFAYTTYVEDVRIAVKKNSNIKSFDDLNGKTVATTTGTTSVQIIRKNQRSKNINFNVVK 177 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + + R DA+ D S L + PS+++IL ++S P+A + D Sbjct: 178 GKDHGDSFLLLESGRADAFIMDASILAGHIAKSKNPSDYIILDTVLSVEPIACMLRLNDK 237 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 ++ + + E L +K ++ T P Sbjct: 238 NLKQAINDSIVRQIKDESL---KKLHDKWFMKPTPP 270 >gi|187930729|ref|YP_001901216.1| family 3 extracellular solute-binding protein [Ralstonia pickettii 12J] gi|187727619|gb|ACD28784.1| extracellular solute-binding protein family 3 [Ralstonia pickettii 12J] Length = 301 Score = 203 bits (516), Expect = 4e-50, Method: Composition-based stats. Identities = 49/261 (18%), Positives = 95/261 (36%), Gaps = 9/261 (3%) Query: 10 LCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 L L L A L I+ + G+ + F+ + + GF D C + Sbjct: 13 LALASLLAIGAHAQALDGTLKKIQDSNTILIGVRESSIPFSYRDSKNEIVGFSADLCSRV 72 Query: 68 SSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 A+ K I+++P+ ++ R +Q+ +D+ T RE + Sbjct: 73 IDAVRKKTGKPNLDIKHIPVTSQNRTSLVQNGSVDLECGVTTHLKSREQQTAF--STTFF 130 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 G + + K G+ L+G S+ AGTT+E L M + I + E Sbjct: 131 IAGTRLLTNVKSGVKDFPDLAGKSVITNAGTTSERILRRMNDEKKMNMNVISGKDYGESF 190 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 ++ R A+ D L + +P + V+ S + + D ++ +V Sbjct: 191 LTLQSGRVAAFMMDDVLLAGARTLAQKPDDWVVTGTPQSFEAYGFMLRRDDPQFKKLVDD 250 Query: 244 THYAMVTAEELG-ITQKNINQ 263 T ++ + E+ + K + Sbjct: 251 TMAGVMKSGEVKALYAKWFEK 271 >gi|16079797|ref|NP_390621.1| glutamine ABC transporter glutamine-binding lipoprotein [Bacillus subtilis subsp. subtilis str. 168] gi|221310680|ref|ZP_03592527.1| glutamine ABC transporter (glutamine-binding protein) [Bacillus subtilis subsp. subtilis str. 168] gi|221315003|ref|ZP_03596808.1| glutamine ABC transporter (glutamine-binding protein) [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319924|ref|ZP_03601218.1| glutamine ABC transporter (glutamine-binding protein) [Bacillus subtilis subsp. subtilis str. JH642] gi|221324205|ref|ZP_03605499.1| glutamine ABC transporter (glutamine-binding protein) [Bacillus subtilis subsp. subtilis str. SMY] gi|81555988|sp|O34563|GLNH_BACSU RecName: Full=ABC transporter glutamine-binding protein glnH; Flags: Precursor gi|2635189|emb|CAB14685.1| glutamine ABC transporter (glutamine-binding lipoprotein) [Bacillus subtilis subsp. subtilis str. 168] gi|28375453|emb|CAA93318.1| glutamine-binding subunit [Bacillus subtilis subsp. subtilis str. 168] Length = 273 Score = 203 bits (516), Expect = 4e-50, Method: Composition-based stats. Identities = 55/278 (19%), Positives = 108/278 (38%), Gaps = 24/278 (8%) Query: 1 MYKDFFVSILCLIILFFTSF------------STNASILGDIKKRGFLKCGINTGLVGFA 48 M K F ++++ L + + + L IK + G+ T F Sbjct: 1 MKKIFSLALISLFAVILLAACGSKGSNGEASKESKKDTLAAIKDNDKIVFGVKTDTRLFG 60 Query: 49 EVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 ++G+ +GFD+D + ++ I D K Q+ + +K R LQ+ ID + T Sbjct: 61 LKNPSSGEIEGFDIDIAKQIAKDILGDEKKAQFKEVTSKTRIPMLQNGDIDAIVATMTIT 120 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + + + GQ ++ K I SV L G+ + G+T+ + + Sbjct: 121 EERKKEVDF--SDVYFEAGQSLLVKKGSKIKSVENLGKGSKVLAVKGSTSSQNIREKAPE 178 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + FE E A ++ + DA T D + LY + N + + + P Sbjct: 179 AS----VLEFENYAEAFTALKSGQGDALTTDNAILYGMADENKN---YQLTGKPFTDEPY 231 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQKNINQ 263 A+ +G + ++ + M + I +K I + Sbjct: 232 GIAVKKGQSALAKEINASLKKMKSDGRYDEIYKKWIKE 269 >gi|315644844|ref|ZP_07897973.1| extracellular solute-binding protein family 3 [Paenibacillus vortex V453] gi|315279786|gb|EFU43087.1| extracellular solute-binding protein family 3 [Paenibacillus vortex V453] Length = 269 Score = 203 bits (516), Expect = 4e-50, Method: Composition-based stats. Identities = 59/263 (22%), Positives = 107/263 (40%), Gaps = 14/263 (5%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFC 64 +S++ ++I S N L IKKRG L G+ F A G+ +GFD+D Sbjct: 15 ILSLIMMLIASGCGGSGNTDTLDAIKKRGKLVAGVKYDTKLFGLQDPATGNVEGFDIDIA 74 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 +AL+ I D +K++ + +K R L++ IDI+ T R+ + + + Sbjct: 75 KALAKKILGDETKVELKEVTSKTRIDMLKNGDIDIIIATMTITEERKEQVDF--SDVYFE 132 Query: 125 DGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 GQ ++ K I+ + L + G+T+ + + + FE ++ Sbjct: 133 AGQSLLVKKGSPITGLESLNKDTKVLTVKGSTSAQNIREKAPDA----VILEFENYQDAF 188 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 A +A + DA T D S L ++ + ++ + P AI +G+ E+ V+ Sbjct: 189 TALKAGQGDALTTDNSILLGMQQQDPS---FELVGGNFTDEPYGMAIKKGNPEFVKTVNE 245 Query: 244 THYAMVTAEELGITQKNINQVSK 266 M + G K Q Sbjct: 246 LLKEMKDS---GDYDKLYEQWMG 265 >gi|222152719|ref|YP_002561895.1| glutamine-binding protein [Streptococcus uberis 0140J] gi|222113531|emb|CAR41318.1| putative glutamine-binding protein precursor [Streptococcus uberis 0140J] Length = 271 Score = 203 bits (516), Expect = 4e-50, Method: Composition-based stats. Identities = 57/277 (20%), Positives = 113/277 (40%), Gaps = 18/277 (6%) Query: 2 YKDFFVSILCLIILFFTSFSTNAS-------ILGDIKKRGFLKCGINTGLVGFAEVKAN- 53 K F ++ L+ L F ++ + IKK G L+ G+ + F A+ Sbjct: 5 KKWTFFCLMTLLTLIFMPKASADDNQLLKTKSIQTIKKAGVLRVGVKQDVPNFGYYSADT 64 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G ++G +VD R ++ + P + + A+ R L + Q+DI+ T R+ + Sbjct: 65 GKYEGMEVDLARKIAKKLKVKPV---FTAVTAQTREALLDNGQLDIIIATYTITPERQAN 121 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + Y D GF++++ + I S+ L+ +I V G+TT+ + +Y KAH++ + Sbjct: 122 YSFSI--PYYRDEVGFLVNQSEKIDSIKDLNHRTIGVAQGSTTKAAIEEYGKAHHLDFKF 179 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + E+ + + R A++ D S L + ILPD ++ A + Sbjct: 180 VQLGSYPELAISLYSKRIQAFSVDKSILSGYVSK-----QTAILPDGFNQQSYGIASSKA 234 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 +++ ++ L KN + Sbjct: 235 NSQLTKYINQLIEEWTNDGSLQAIYKNYGLKPAKSEK 271 >gi|295702498|ref|YP_003595573.1| glutamine ABC transporter glutamine-binding protein GlnH [Bacillus megaterium DSM 319] gi|294800157|gb|ADF37223.1| glutamine ABC transporter, glutamine-binding protein GlnH [Bacillus megaterium DSM 319] Length = 271 Score = 203 bits (516), Expect = 4e-50, Method: Composition-based stats. Identities = 57/250 (22%), Positives = 106/250 (42%), Gaps = 12/250 (4%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDP 75 + S L +IK RG + G+ F G+ +GFDVD + L+ I D Sbjct: 31 TSGSSAKKDALTEIKDRGKIVIGVKNDTRLFGLKNPKTGEVEGFDVDISKQLAKEILGDE 90 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 +K+++ + +K R LQ ID + T R+ + + + GQ ++ K Sbjct: 91 NKVEFKEVTSKTRVPLLQKGDIDAVVATMTITDERKKEVDF--TDVYFQAGQSLLVKKGS 148 Query: 136 GISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I SV L G + G+T+ + + + + FE E A ++ + DA Sbjct: 149 KIKSVDDLKKGTKVLAVKGSTSAINIREKAPET----TVLEFENYAEAFTALKSKQGDAL 204 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 T D + LY + ++ PS + ++ ++ P A+ +G+ E + ++ + + + Sbjct: 205 TTDDAILYGMA--DEDPS-YELVGKPFTEEPYGIAVKKGNKELVDALNDALKKIKDSGKY 261 Query: 255 G-ITQKNINQ 263 G I K I Q Sbjct: 262 GEIHDKWIKQ 271 >gi|182683540|ref|YP_001835287.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae CGSP14] gi|182628874|gb|ACB89822.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae CGSP14] Length = 293 Score = 202 bits (515), Expect = 5e-50, Method: Composition-based stats. Identities = 59/266 (22%), Positives = 107/266 (40%), Gaps = 16/266 (6%) Query: 1 MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVK-ANGDWK 57 M K FF+S L + + + A + DI+KRG L G+ + F G + Sbjct: 30 MKKKFFLSALLISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYS 89 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G + D + ++ + KI+Y+P+ A+ R L ++Q+D+ T R+ Sbjct: 90 GIETDLAKIVADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKLYNF- 145 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y D GF+++K I + L+G +I V G+ T+ + + K + + + Sbjct: 146 -TSPYYTDASGFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLTFKFVELG 204 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E+ + AHR DA++ D S L +L D S + +TE Sbjct: 205 SYPELITSLHAHRIDAFSVDRSILSGYTSK-----RTELLDDSFKPSDYGIVTKKSNTEL 259 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQ 263 + + + G QK ++ Sbjct: 260 NDYLDTLVTKW---SKDGSLQKLYDR 282 >gi|307708313|ref|ZP_07644780.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus mitis NCTC 12261] gi|307615759|gb|EFN94965.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus mitis NCTC 12261] Length = 264 Score = 202 bits (515), Expect = 5e-50, Method: Composition-based stats. Identities = 62/266 (23%), Positives = 111/266 (41%), Gaps = 16/266 (6%) Query: 1 MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVK-ANGDWK 57 M K FF+S L + +L + A + DI+KRG L G+ + F G + Sbjct: 1 MKKKFFLSALLISLLGLAAAKPVQADTSVADIQKRGELVVGVKQDVPNFGYKDPKTGTYS 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G + D + ++ + K++Y+P+ A+ R L ++Q+D+ T R+ Sbjct: 61 GIETDLAKMVADEL---KVKVRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKLYNF- 116 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y D GF+++K I S+ L+G +I V G+ T+ + + K +K+ + Sbjct: 117 -TSPYYTDASGFLVNKSAKIKSIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVELG 175 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E+ + AHR DA++ D S L V+L D S + +TE Sbjct: 176 SYPELITSLHAHRIDAFSVDRSILSGYISK-----RTVLLDDSFKPSDYGIVTKKSNTEL 230 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQ 263 + + + G QK ++ Sbjct: 231 NDYLDNLVTKW---SKDGSLQKLYDR 253 >gi|170702190|ref|ZP_02893096.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] gi|170132899|gb|EDT01321.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] Length = 278 Score = 202 bits (515), Expect = 5e-50, Method: Composition-based stats. Identities = 64/278 (23%), Positives = 97/278 (34%), Gaps = 14/278 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 M + L L +A L DIKK G L+ F V G Sbjct: 8 MKFHTLATWLVGAALVTAGTVAHADRLDDIKKAGVLRVATFDSNPPFGYVDGKSNHIVGL 67 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD+ +AL+ + K+Q P N R L S ++D++ N T R + + Sbjct: 68 DVDYAKALADKLG---VKLQLQPTNPANRIPFLTSGKVDLVLANFTITDERAKQVDFS-- 122 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I YF + KK + S QL+ + GTT E+TL + + + ++ Sbjct: 123 -IPYFSSGQQFLAKKGVLKSADQLNSLRVGADKGTTNEITLREKYPKA----TIVAYDDT 177 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AA RA A T D L L + I IS + + +G+T Sbjct: 178 PFAFAALRAGNVQAITQDGPKLIGLLANVPDKQNYEIPAFTISNDYMGVGVPKGETRLLG 237 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277 V+ T E G + + T + R Sbjct: 238 FVNDTLKG---LEANGRAGQIYDAWFGPATKTPLTRIF 272 >gi|78357806|ref|YP_389255.1| extracellular solute-binding protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78220211|gb|ABB39560.1| amino acid ABC transporter substrate-binding protein, PAAT family [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 275 Score = 202 bits (515), Expect = 5e-50, Method: Composition-based stats. Identities = 58/276 (21%), Positives = 113/276 (40%), Gaps = 14/276 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M V++ + +F S + + I + ++ GI T + A G+W GFD Sbjct: 1 MRMAKIVALAVAMTMFVASAAFAGPVYDKIMQTKKVRVGIMTDSIPGAFYNEKGEWVGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D ++ + + ++ +N + R LQ +IDI N T R+ S+ + Sbjct: 61 YDIATEVAKRMGVEIDRV---AVNNQTRISFLQQGRIDISVANMTHTRERDKSIDFSI-- 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN---MKYHPIVFE 177 +FDGQ + K + +S++ + G I GTT+EL L KA + I ++ Sbjct: 116 TYFFDGQKVLAKKGQ-FTSLNDMVGKKIATMQGTTSELNLKAALKAAGDPDYDKNVISYQ 174 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + + A ++ R ++ D + L + P + ++ D +S P + Q D+ Sbjct: 175 KESQCFQALQSGRVAGWSTDATILLGYA--SKTPGAYELVGDFLSDEPYGMGLPQDDSAL 232 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 + V+ A+ G + N+ T ++ Sbjct: 233 RDAVN---MAIQDMWRDGTYMEIYNKWYGPGTPFEM 265 >gi|94309287|ref|YP_582497.1| extracellular solute-binding protein [Cupriavidus metallidurans CH34] gi|93353139|gb|ABF07228.1| glutamate and aspartate transporter subunit ; periplasmic-binding component of ABC superfamily [Cupriavidus metallidurans CH34] Length = 302 Score = 202 bits (515), Expect = 5e-50, Method: Composition-based stats. Identities = 48/265 (18%), Positives = 95/265 (35%), Gaps = 12/265 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA------SILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M + F L+ + + S A L IK G + G T + F+ AN Sbjct: 1 MNQFFMTRAAVLMAVSLGAGSALAVDVAASPTLSKIKSSGTISIGHRTSSIPFSYYDANQ 60 Query: 55 DWKGFDVDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 GF D C + A+ + +++ +P+ ++ R +Q+ +D+ T R Sbjct: 61 KVIGFSQDICDRVIDAVKKETGTPNLQVRMVPVTSQNRQSLVQNGTVDLECGVTTNLKSR 120 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 + + + G ++ K + LSG ++ AGTT+E L Sbjct: 121 QQQVAF--STTFFVAGTRLLVKKGSPVHDFGDLSGKAVVTNAGTTSERILRKLNDEKGAN 178 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 + E ++ R A+ D L + P++ V++ S + Sbjct: 179 ITIQSAKDYGESFLILQSGRVAAFMMDDVLLSGSRTLAPNPNDWVVVGTPQSFEAYGFMM 238 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELG 255 + D + +V T ++ + E+ Sbjct: 239 RKDDPGFKQVVDATTTGLMRSGEIN 263 >gi|270263718|ref|ZP_06191987.1| glutamate/aspartate periplasmic-binding protein, precursor [Serratia odorifera 4Rx13] gi|270042602|gb|EFA15697.1| glutamate/aspartate periplasmic-binding protein, precursor [Serratia odorifera 4Rx13] Length = 276 Score = 202 bits (515), Expect = 6e-50, Method: Composition-based stats. Identities = 47/254 (18%), Positives = 91/254 (35%), Gaps = 17/254 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K L L+++ +A L IK G + G V F+ Sbjct: 3 MRK----LALSLLLIGMAGNVAHAEELTGTLKKIKDNGVIVVGHRESSVPFSYYDNQQKV 58 Query: 57 KGFDVDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G+ D+ + A+ + +++ LP+ ++ R LQ+ D +T + R+ Sbjct: 59 VGYSQDYSNQIVDAVKKKLNMPDLQVKMLPITSQNRIPLLQNGTFDFECGSTTNNVERQK 118 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + G ++ K + L+G + V +GTT+E+ L + M Sbjct: 119 QAAF--SDTIFVVGTRLLVKKGSDVKDFKDLAGKPVVVTSGTTSEVLLNKLNDSGKMNMR 176 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 I + + + R A+ D + L + +P + IL SK + + Sbjct: 177 IISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDQWEILGTPQSKEAYGCMLRK 236 Query: 233 GDTEWYNIVSWTHY 246 D E+ +W+ Sbjct: 237 DDAEFK---NWSMT 247 >gi|221065073|ref|ZP_03541178.1| extracellular solute-binding protein family 3 [Comamonas testosteroni KF-1] gi|264680314|ref|YP_003280224.1| amino-acid ABC transporter bindingprotein ybeJ precursor [Comamonas testosteroni CNB-2] gi|299532720|ref|ZP_07046108.1| amino-acid ABC transporter bindingprotein ybeJ precursor [Comamonas testosteroni S44] gi|220710096|gb|EED65464.1| extracellular solute-binding protein family 3 [Comamonas testosteroni KF-1] gi|262210830|gb|ACY34928.1| amino-acid ABC transporter bindingprotein ybeJ precursor [Comamonas testosteroni CNB-2] gi|298719355|gb|EFI60324.1| amino-acid ABC transporter bindingprotein ybeJ precursor [Comamonas testosteroni S44] Length = 299 Score = 202 bits (514), Expect = 6e-50, Method: Composition-based stats. Identities = 56/276 (20%), Positives = 107/276 (38%), Gaps = 11/276 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +I + T F+ L IK G + G+ G NG + GF Sbjct: 1 MKKHLL-AIAVTALATGTVFAQANDTLAKIKSTGSVTLGVRESS-GLGYTLGNGKYVGFH 58 Query: 61 VDFCRALSSAI----FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 + + I +++Y P+ ++ R +Q+ +DI +T R+ Sbjct: 59 TEMGERILKDIQKQLGLTALEVKYQPVTSQNRIPLVQNGTVDIECGSTTNNTARQKDAAF 118 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 AF TY + GI+ + L+G +I GTT+ TL +A + + ++ Sbjct: 119 AF--TTYVEEVRIATRANSGITGIKDLNGKTIVTTTGTTSVQTLRKNKRADGLTFKEVMG 176 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + R DA+ D S L A + P+++ I+ +++S P+A + + D Sbjct: 177 KDHADSFLMLETGRADAFIMDGSILAANISKSKAPNDYKIVGEVLSVEPIACMMRKDDPA 236 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272 + V + + + G K ++ P+ Sbjct: 237 FKKAVDESIVRQI---KDGSLTKLYDKWFLQPIPPN 269 >gi|300722327|ref|YP_003711612.1| glutamate/aspartate ABC transporter periplasmic-binding protein [Xenorhabdus nematophila ATCC 19061] gi|297628829|emb|CBJ89407.1| glutamate/aspartate transport protein (ABC superfamily, peri_bind) [Xenorhabdus nematophila ATCC 19061] Length = 295 Score = 202 bits (514), Expect = 7e-50, Method: Composition-based stats. Identities = 52/275 (18%), Positives = 105/275 (38%), Gaps = 10/275 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++++ L + L IK G + G V FA +N + G+ Sbjct: 1 MRK-LMLTMMLLGAVGAAHAEELTGTLKKIKDTGMIAVGHRESSVPFAYYDSNQNVIGYA 59 Query: 61 VDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 D+ + AI + +++ +P+ ++ R LQ+ + +T T R+ Sbjct: 60 QDYSNMIVDAIKAKLNMPNLQVKLIPVTSQNRIPLLQNGTYNFECGSTTNTPERQKQAAF 119 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + + +K GI L+G ++ V AGTT+E+ L NMK I Sbjct: 120 --SNTIFIVSTRLLTNKDSGIKGFDDLAGKNVVVSAGTTSEIILNKLNDEKNMKMRIISA 177 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + + R A+ D + L + +P + +I+ + S+ + + D + Sbjct: 178 KDHGDSFRTLESGRAAAFMVDDALLAGERAKAKKPDQWLIVGEPQSREGYGCLMRKDDAQ 237 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + +V T+ G +K + ++ P Sbjct: 238 FKALVDEVIVKTQTS---GKAEKMFIRWFQEPIPP 269 >gi|271499712|ref|YP_003332737.1| family 3 extracellular solute-binding protein [Dickeya dadantii Ech586] gi|270343267|gb|ACZ76032.1| extracellular solute-binding protein family 3 [Dickeya dadantii Ech586] Length = 297 Score = 202 bits (514), Expect = 7e-50, Method: Composition-based stats. Identities = 48/262 (18%), Positives = 94/262 (35%), Gaps = 13/262 (4%) Query: 18 TSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 T +A L IK G + G V F+ G+ + + A+ Sbjct: 16 TGSLAHAEELTGTLKKIKDNGVITIGHRESSVPFSYYDNQQKVVGYSQAYSDKIVEAVRK 75 Query: 74 DPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 +++ +P+ ++ R LQ+ D+ +T L R+ + + G Sbjct: 76 KLDAPNLQVKLIPITSQNRIPLLQNGTYDLECGSTTNNLERQQQVAF--SDTIFIIGTRL 133 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 + K + S L+G ++ V +GTT+E+ L + + I + + + Sbjct: 134 LTKKDSDVKDFSDLAGKAVVVTSGTTSEVLLNKMNEEKKLNMRIISAKDHGDSFRTLESG 193 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 R A+ D + L + P E VI S+ + + D ++ +V T + Sbjct: 194 RAVAFMMDDALLAGERAKAKAPDEWVITGTPQSREAYGCMLRKDDPQFKQLVDATISQVQ 253 Query: 250 TAEELGITQKNINQVSKDTTNP 271 T+ E +K + K P Sbjct: 254 TSGE---AEKWFDTWFKQPIPP 272 >gi|182441006|dbj|BAG24131.1| probable binding protein component of ABC [Pseudomonas cichorii] Length = 268 Score = 202 bits (514), Expect = 7e-50, Method: Composition-based stats. Identities = 68/280 (24%), Positives = 105/280 (37%), Gaps = 17/280 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59 M K ++ L L +L S +A L DIKK G L+ F V A +G Sbjct: 1 MKKLTAITALSLAVL---SGLAHADRLEDIKKSGVLRVAAFDSNPPFGFVGAKSKQIEGL 57 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD+ +A++ + K+Q P N R L + ++D++ N T R + + Sbjct: 58 DVDYAKAIADKLG---VKLQLQPTNPANRVPLLVANKVDLVLANFTITPERAEQVNFSI- 113 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ FI+ K + + L+ + V GT E L + F I ++ Sbjct: 114 -PYFSSGQQFIVKKGT-LKNQDDLNKWRVGVDKGTVNEGVLREKFPGA----KVIAYDDT 167 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 A R A T D L L ++ + P IS + I +G+T Sbjct: 168 PFAFTALRNGNVQAITQDGPKLIGLLANVPDKDKYEVPPFTISNDLIGVGIPKGETALTE 227 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGI 279 V+ T V E G QK + T + R I Sbjct: 228 FVNQTL---VELESKGQAQKIYDTWFGPDTPTLLARLFKI 264 >gi|256026691|ref|ZP_05440525.1| solute-binding protein for glutamate_aspartate ABC transporter system [Fusobacterium sp. D11] gi|260495454|ref|ZP_05815580.1| ABC superfamily ATP binding cassette transporter binding protein [Fusobacterium sp. 3_1_33] gi|289764686|ref|ZP_06524064.1| ABC-type amino acid transport/signal transduction system [Fusobacterium sp. D11] gi|260196991|gb|EEW94512.1| ABC superfamily ATP binding cassette transporter binding protein [Fusobacterium sp. 3_1_33] gi|289716241|gb|EFD80253.1| ABC-type amino acid transport/signal transduction system [Fusobacterium sp. D11] Length = 293 Score = 202 bits (514), Expect = 7e-50, Method: Composition-based stats. Identities = 55/293 (18%), Positives = 112/293 (38%), Gaps = 36/293 (12%) Query: 2 YKDFFVSILCLIILFFTS------------------FSTNASILGDIKKRGFLKCGINTG 43 K ++I+ + +L + + A + +IK G +K G+ T Sbjct: 5 KKVLKLAIVGVAVLALAACENKTEEAKPESQAPAQETTAKARTVQEIKDSGVIKIGVFTD 64 Query: 44 LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103 F V NG +G+DV F L+ + K++Y+ L+ R ++ + DI++ N Sbjct: 65 KAPFGYVDENGKNQGYDVYFTNRLAKDLG---VKVEYISLDPASRVEYAETGKADIVAAN 121 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163 T R + + G + K I S+ +L ++ V GTT E Y Sbjct: 122 FTVTPERAEKVDFSL--PYMKVSLGVVSPDKAVIKSIDELKDKTLIVSKGTTAEY----Y 175 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 F + + ++ + A R DA++ D + + A P V + + Sbjct: 176 FSKNYPEVKLQKYDSYADAYNALLDGRGDAFSTDNTEVLAWAKA--NPGFTVGIDSLGDV 233 Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI----TQKNINQVSKDTTNPD 272 +A A+ +G+ +++ W + + + + + + D+ +PD Sbjct: 234 DTIAVAVQKGN---KDLLDWINNEIKELGKENFFHEAYKATLEPIYGDSADPD 283 >gi|94310068|ref|YP_583278.1| extracellular solute-binding protein [Cupriavidus metallidurans CH34] gi|93353920|gb|ABF08009.1| glutamate and aspartate transporter subunit ; periplasmic-binding component of ABC superfamily [Cupriavidus metallidurans CH34] Length = 303 Score = 202 bits (514), Expect = 8e-50, Method: Composition-based stats. Identities = 60/284 (21%), Positives = 111/284 (39%), Gaps = 10/284 (3%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 V+ + + + L K G L G + F+ + G+ +D C Sbjct: 16 LVATFGATLAVAQDATVLSGTLKKAKDTGTLVIGYRESSLPFSYLNQASRPIGYSIDICT 75 Query: 66 ALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + A ++++P+ ++ RF A+ S +ID+ +T R ++ P+ Sbjct: 76 EIVQAASEEVGRELAVKWVPVTSENRFEAITSGKIDLECGSTTRNAERMQTVAF--SPVI 133 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 + G ++ + I S L G ++ V AGTT E +A K ++ + I + Sbjct: 134 FIAGTKLMVPRASPIKSFRDLKGKTVVVTAGTTNEQAVAQLSKRFDLNINLIRVRDHADA 193 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A DAY GD LY + +I D IS P + + D ++ +V Sbjct: 194 FAVLSRGGADAYAGDDVLLYGFLAHYGAGKKFIITRDFISYDPYGIMLRKNDPQFATLVG 253 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIG 286 ++T+ G ++ Q + P +R LGI S+ +G Sbjct: 254 KAVRDVITS---GDMERLYKQWFMNKL-PTGER-LGIPMSAELG 292 >gi|226198726|ref|ZP_03794290.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei Pakistan 9] gi|225929166|gb|EEH25189.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei Pakistan 9] Length = 359 Score = 202 bits (514), Expect = 8e-50, Method: Composition-based stats. Identities = 45/270 (16%), Positives = 91/270 (33%), Gaps = 9/270 (3%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + + + L I+ G + G+ V F+ G Sbjct: 62 MKPLRPLLSIAVGCALAAAAHADDAGPTLKKIRDTGVVTLGVRESSVPFSYYDQQQRTIG 121 Query: 59 FDVDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + + + I ++ ++ +P+ ++ R +Q+ +D+ +T T R + Sbjct: 122 YSQEIALKIVDEIKKTLNRPNLTVREIPITSQNRIPLVQNGTVDLECGSTTHTKERANQV 181 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + Y G I+ K G+ L+G ++ AGTT E L + M I Sbjct: 182 SFSNSIFQY--GMRLIVKKSSGVKDFPDLAGKTVATTAGTTEERLLRQWNAEKGMAMQII 239 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + ++ R A+ D LY K P ++VI + + + D Sbjct: 240 SAKDHADAFLNVKSGRAVAFFMDEPLLYGAKAKEANPGDYVITGNSPVSEAYGCMLRKDD 299 Query: 235 TEWYNIVSWTHYAMVTAEE-LGITQKNINQ 263 + + M + E + K N+ Sbjct: 300 PGFKQLADRVIARMQRSGEAEALYVKWFNR 329 >gi|126446655|ref|YP_001079383.1| putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia mallei NCTC 10247] gi|238561893|ref|ZP_04609795.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia mallei GB8 horse 4] gi|251766795|ref|ZP_02264976.2| bacterial extracellular solute-binding protein, family 3 [Burkholderia mallei PRL-20] gi|254175972|ref|ZP_04882630.1| putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia mallei ATCC 10399] gi|254189571|ref|ZP_04896081.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei Pasteur 52237] gi|254203467|ref|ZP_04909828.1| bacterial extracellular solute-binding protein family 3 [Burkholderia mallei FMH] gi|254205346|ref|ZP_04911699.1| bacterial extracellular solute-binding protein family 3 [Burkholderia mallei JHU] gi|254265422|ref|ZP_04956287.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei 1710a] gi|254356151|ref|ZP_04972428.1| bacterial extracellular solute-binding protein family 3 [Burkholderia mallei 2002721280] gi|126239509|gb|ABO02621.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia mallei NCTC 10247] gi|147745706|gb|EDK52785.1| bacterial extracellular solute-binding protein family 3 [Burkholderia mallei FMH] gi|147754932|gb|EDK61996.1| bacterial extracellular solute-binding protein family 3 [Burkholderia mallei JHU] gi|148025134|gb|EDK83303.1| bacterial extracellular solute-binding protein family 3 [Burkholderia mallei 2002721280] gi|157937249|gb|EDO92919.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei Pasteur 52237] gi|160697014|gb|EDP86984.1| putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia mallei ATCC 10399] gi|238523731|gb|EEP87168.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia mallei GB8 horse 4] gi|243064693|gb|EES46879.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia mallei PRL-20] gi|254216424|gb|EET05809.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei 1710a] gi|261826291|gb|ABM99036.2| bacterial extracellular solute-binding protein, family 3 [Burkholderia mallei NCTC 10229] Length = 359 Score = 202 bits (514), Expect = 8e-50, Method: Composition-based stats. Identities = 45/270 (16%), Positives = 92/270 (34%), Gaps = 9/270 (3%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + + + + L I+ G + G+ V F+ G Sbjct: 62 MKPLRPLLSIAVGCALAAAAHANDAGPTLKKIRDTGVVTLGVRESSVPFSYYDQQQRTIG 121 Query: 59 FDVDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + + + I ++ ++ +P+ ++ R +Q+ +D+ +T T R + Sbjct: 122 YSQEIALKIVDEIKKTLNRPNLTVREIPITSQNRIPLVQNGTVDLECGSTTHTKERANQV 181 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + Y G I+ K G+ L+G ++ AGTT E L + M I Sbjct: 182 SFSNSIFQY--GMRLIVKKSSGVKDFPDLAGKTVATTAGTTEERLLRQWNAEKGMAMQII 239 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + ++ R A+ D LY K P ++VI + + + D Sbjct: 240 SAKDHADAFLNVKSGRAVAFFMDEPLLYGAKAKEANPGDYVITGNSPVSEAYGCMLRKDD 299 Query: 235 TEWYNIVSWTHYAMVTAEE-LGITQKNINQ 263 + + M + E + K N+ Sbjct: 300 PGFKQLADRVIARMQRSGEAEALYVKWFNR 329 >gi|330501772|ref|YP_004378641.1| extracellular solute-binding protein family 3 [Pseudomonas mendocina NK-01] gi|328916058|gb|AEB56889.1| extracellular solute-binding protein family 3 [Pseudomonas mendocina NK-01] Length = 299 Score = 202 bits (513), Expect = 9e-50, Method: Composition-based stats. Identities = 49/274 (17%), Positives = 101/274 (36%), Gaps = 9/274 (3%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K + +++ S L I + G + G G V F+ G+ + Sbjct: 1 MKKILAASSMMLMFAAAGVSAQEGTLAKIAELGEISVGHRDGAVPFSYYDDQQRPVGYAM 60 Query: 62 DFCRALSSAI---FDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 D C + AI D+P K+ YLP+ R L + ID+ T R+ + Sbjct: 61 DLCAKVVEAIKLKLDEPDLKVSYLPVTGATRMPLLANGTIDMECGTTTNNAERQRQVSF- 119 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + G + K + +++ G ++ AGTT+ +++ A N+ + + + Sbjct: 120 -SNTYFVAGVRILSKKNAPVETMADAKGKTVVTLAGTTSVKVISEINAAQNLGLNVLSVK 178 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + E + R A D ++ T+ P + ++ + +S P + +GD + Sbjct: 179 DLAEGMLTLQTERAVALIFDDVSIAGAAATSKNPDDFIMSAEPLSVEPYGIMLRRGDDAF 238 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 +V+ T + E+ ++ P Sbjct: 239 KELVNATLDELYATGEIN---AIYDKWFVQPIPP 269 >gi|78066952|ref|YP_369721.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia sp. 383] gi|77967697|gb|ABB09077.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia sp. 383] Length = 306 Score = 202 bits (513), Expect = 9e-50, Method: Composition-based stats. Identities = 46/273 (16%), Positives = 92/273 (33%), Gaps = 9/273 (3%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + + L + + L I++ + G V F+ ANG GF D Sbjct: 13 RPLLFAACALACGASLAAEPLSGTLDKIRQSNLISIGHRETSVPFSYADANGKVIGFSQD 72 Query: 63 FCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 C + +A+ K ++++P+ ++ R +Q+ +D+ T R + Sbjct: 73 LCDRVIAAVKARTGKPDLQVRFIPVTSQNRIPLVQNGTVDLECGVTTNLAARHAQVAF-- 130 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + + GI L+G ++ GTT+E L + M I + Sbjct: 131 STTFFVATTRLLTRTNSGIRDFPDLAGKTVVTNQGTTSERLLRKMNEEKKMNMRIISAKD 190 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E + R AY D L ++ +P++ I+ S + + D ++ Sbjct: 191 YGEGRLTLESGRAAAYMMDDVLLAGVRQLAAKPADWQIVGTPQSSEAYGFMLRKDDPQFK 250 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 +V V + G ++ P Sbjct: 251 ALVDGVL---VQLMKRGEIDTLYDKWFTKPVPP 280 >gi|34496730|ref|NP_900945.1| ABC transporter periplasmic-binding protein [Chromobacterium violaceum ATCC 12472] gi|34102585|gb|AAQ58950.1| probable ABC transporter, periplasmic-binding protein [Chromobacterium violaceum ATCC 12472] Length = 283 Score = 202 bits (513), Expect = 9e-50, Method: Composition-based stats. Identities = 63/276 (22%), Positives = 110/276 (39%), Gaps = 18/276 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59 M K +++ + TS + A L DIKK G L+ F + A G Sbjct: 17 MKKTIALAL----AVALTSTAALADRLDDIKKAGVLRVAAFDSNPPFGFLDAKTRQISGL 72 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD + ++ + K+Q +P N R L S + DI++ N T R+ + + Sbjct: 73 DVDVAQHIAKKLG---VKLQLIPTNPANRVPLLVSGKADIVAANFTVTDERKKQVDFSL- 128 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ FI+ K + QL+G + V GTT E+ L + + K + ++ Sbjct: 129 -PYFASGQQFIVRKGA-LQKPEQLAGLRVGVDKGTTQEVYLREKYP----KTTVVAYDDT 182 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 A R A T D S L AL +++ + P +++ A + +G+ Sbjct: 183 PLAFTALRNGNVQAITQDGSKLAALLANAPDKAKYELAPFTLTREFQAIGLPKGEARLTK 242 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 +V+ T E+ G + ++ T + R Sbjct: 243 VVNETLR---ELEKSGDAARIYDRWFGPKTKAPLPR 275 >gi|171318958|ref|ZP_02908088.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MEX-5] gi|171095843|gb|EDT40787.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MEX-5] Length = 271 Score = 202 bits (513), Expect = 9e-50, Method: Composition-based stats. Identities = 63/278 (22%), Positives = 97/278 (34%), Gaps = 14/278 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 M + L L +A L DI+K G L+ F V G Sbjct: 1 MKFHTLATWLVGAALVTAGTVAHADRLDDIRKAGVLRVATFDSNPPFGYVDGKSNHIVGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD+ +AL+ + K+Q P N R L S ++D++ N T R + + Sbjct: 61 DVDYAKALADKLG---VKLQLQPTNPANRIPFLTSGKVDLVLANFTITDERAKQVDFS-- 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I YF + KK + S QL+ + GTT E+TL + + + ++ Sbjct: 116 -IPYFSSGQQFLAKKGVLKSADQLNNLRVGADKGTTNEITLREKYPKA----TIVAYDDT 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AA RA A T D L L + I IS + + +G+T Sbjct: 171 PFAFAALRAGNVQAITQDGPKLIGLLANVPDKQNYEIPAFTISNDYMGVGVPKGETRLLG 230 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277 V+ T E G + + T + R Sbjct: 231 FVNDTLKG---LEANGRAGQIYDAWFGPATKTPLTRIF 265 >gi|170704112|ref|ZP_02894730.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] gi|170130978|gb|EDS99687.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] Length = 313 Score = 202 bits (513), Expect = 1e-49, Method: Composition-based stats. Identities = 54/240 (22%), Positives = 99/240 (41%), Gaps = 6/240 (2%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK- 77 + + L ++ G + G + F+ + A G+ ++ C+AL S+I D +K Sbjct: 38 APAQLTGTLAKVRSSGTIALGYRDASIPFSYLNARNQPIGYSIELCKALVSSIEDAVNKS 97 Query: 78 --IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 I+++P+ + R A+ S +D+ +T L R+ + PI + G ++ + Sbjct: 98 LTIRWVPVTSDNRIDAVASGNVDLECGSTTSNLERQQRVAF--SPIIFVAGTKVMVKRGS 155 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I S L+G + V AGTT E L D + V + A + R DA+ Sbjct: 156 PIRSFRDLAGKKVAVTAGTTNEKALRDLDARFKLGIQLQVAPDHAQGFALVASGRADAFA 215 Query: 196 GDISALYALKLTNDRP-SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D LY L N ++ ++ D +S P + D + +V T + E+ Sbjct: 216 TDDVLLYGLIAENAGKGGQYDVVGDYLSYDPYGIMFRKDDPQLAQVVKSTFEELAVDGEI 275 >gi|220904827|ref|YP_002480139.1| extracellular solute-binding protein family 3 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869126|gb|ACL49461.1| extracellular solute-binding protein family 3 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 302 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 49/251 (19%), Positives = 94/251 (37%), Gaps = 9/251 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS----KIQY 80 L IK+ G + G V F+ + G+ D+ + A+ + K+++ Sbjct: 31 GTLKKIKETGVITVGHRESSVPFSYYDLQQNVIGYSQDYSNKIVDAVKKQLNMPNLKVRF 90 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +P+ ++ R LQ+ D +T R+ + + G + HK GI Sbjct: 91 VPITSQNRIPLLQNGTYDFECGSTTNNADRQQQVDF--SNTLFIVGTRLLTHKDSGIKDF 148 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L G ++ V AGTT+E+ L + I + + + R A+ D + Sbjct: 149 DDLKGKNVAVTAGTTSEMLLNKMNDEKKLGISIISTKDHGDSFRTVESGRAVAFFIDDAL 208 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L + +P+E VI+ S + +GD + + A+ + G +K+ Sbjct: 209 LAGERAKAKKPAEWVIVGTPQSFEAYGCMLRKGDAAFKKLADD---AIAELQLNGEAEKS 265 Query: 261 INQVSKDTTNP 271 + K P Sbjct: 266 YTRWFKQPIPP 276 >gi|182419546|ref|ZP_02950794.1| glutamine-binding protein [Clostridium butyricum 5521] gi|237668292|ref|ZP_04528276.1| glutamine-binding protein (GlnBP) [Clostridium butyricum E4 str. BoNT E BL5262] gi|182376581|gb|EDT74156.1| glutamine-binding protein [Clostridium butyricum 5521] gi|237656640|gb|EEP54196.1| glutamine-binding protein (GlnBP) [Clostridium butyricum E4 str. BoNT E BL5262] Length = 279 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 59/238 (24%), Positives = 98/238 (41%), Gaps = 8/238 (3%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPS 76 S S + + IK G LK G+ + F + G+ +GF+VD + ++ I D + Sbjct: 39 ASSSAEGADIQKIKDNGVLKVGVKVDVPKFGYKNPDTGEIEGFEVDLSKQIAKKILGDEN 98 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 KI+ + AK R L + +ID+++ T R+ S DG G ++ K G Sbjct: 99 KIELQGVTAKTRGPLLDNGEIDMVAATFTITDERKKSYNF--SDPYLTDGVGLLVKKDAG 156 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 +S+ L+G +I V +TT+ L + + F EI AA + R D + Sbjct: 157 YTSLKDLNGKTIGVAQSSTTKKALEEEAANQGISLKFSEFGSYPEIKAALDSKRVDCFAV 216 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D S L VIL D + A + E +++ M T+ E+ Sbjct: 217 DASILNGYV-----DDNSVILDDRYNPQEYGIASKLDNKELAKVINEVVNDMKTSGEM 269 >gi|70733091|ref|YP_262864.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas fluorescens Pf-5] gi|68347390|gb|AAY94996.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas fluorescens Pf-5] Length = 300 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 57/272 (20%), Positives = 108/272 (39%), Gaps = 11/272 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEV-KANGDW 56 M+K + ++ S + A L I + G V F+ V +G Sbjct: 1 MHKITLLGCTLGLLFSAMSQANEAPLQGTLAKIANSASITLGYRDASVPFSYVGDNSGKP 60 Query: 57 KGFDVDFCRALSSAIFD----DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G+ V+ + I K++Y + ++ R +Q+ +D+ +T T R+ Sbjct: 61 MGYSVELASKVVERIQQQLHLPNLKVKYNLVTSQTRIPLVQNGTVDLECGSTGVTAERQK 120 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + ++ I Y GQ + K GI S + L G ++ AGTT E L Y H + Sbjct: 121 QVAFSYGFI-YVKGQ-LLTAKDSGIKSFADLRGKNVVTTAGTTNERFLKSYNVEHKIDMF 178 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 I + E ++ R A+ D + LY + P V++ + S+ + + + Sbjct: 179 VISAKDHGEAFQMLQSGRAAAFYMDDALLYGERAKARDPHNWVVVGEEQSREIYSCMVRK 238 Query: 233 GDTEWYNIVSWTHYAMVTAEEL-GITQKNINQ 263 D ++ +V+ + + E+ GI Q+ Q Sbjct: 239 DDPQFLALVNGALADLYRSGEINGIYQRWFQQ 270 >gi|229188845|ref|ZP_04315879.1| hypothetical protein bcere0002_5360 [Bacillus cereus ATCC 10876] gi|228594658|gb|EEK52443.1| hypothetical protein bcere0002_5360 [Bacillus cereus ATCC 10876] Length = 276 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 60/278 (21%), Positives = 106/278 (38%), Gaps = 24/278 (8%) Query: 1 MYKDFFVSIL-CLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + + CL +L + + IKKRG L G+ F Sbjct: 4 MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEKIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPMLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKA 166 R+ + + + GQ ++ K I SV + G + G+T+ + Sbjct: 124 EERKKEVDF--SDVYFKAGQSLLVKKGSNIKSVDDIKQGVKVLAVKGSTSTNNIRQKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQ 263 A+ +G + ++ M + E + +K I Q Sbjct: 235 GIAVQKGADDLTKEINTLIKDMKASGEYDKLYEKWIGQ 272 >gi|228919494|ref|ZP_04082858.1| hypothetical protein bthur0011_5190 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228840137|gb|EEM85414.1| hypothetical protein bthur0011_5190 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 276 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 61/278 (21%), Positives = 106/278 (38%), Gaps = 24/278 (8%) Query: 1 MYKDFFVSIL-CLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + I CL +L + + IKKRG L G+ F Sbjct: 4 MKKLFMLIIFSCLFVLVVAGCGSKKDEAKETNTKQGRAVEQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPMLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKA 166 R+ + + + GQ ++ K I SV + G + G+T+ + Sbjct: 124 EERKKEVDF--SDVYFKAGQSLLVKKGSNIKSVDDIKQGVKVLAVKGSTSTNNIRQKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQ 263 A+ +G + ++ M + E + +K I Q Sbjct: 235 GIAVQKGADDLTKEINTLIKDMKASGEYDKLYEKWIGQ 272 >gi|121393|sp|P27676|GLNH_BACST RecName: Full=Glutamine-binding protein; Short=GlnBP; Flags: Precursor gi|142989|gb|AAA22484.1| glutamine-binding protein [Geobacillus stearothermophilus] Length = 262 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 11/218 (5%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPS 76 T S + L IKKRG L G+ L F G +GFD+D + L+ I D + Sbjct: 43 TETSAGTNTLEKIKKRGKLIVGVKYDLNLFGLKNPETGKVEGFDIDIAKGLAKKILGDEN 102 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 KI+ + +K R L + +ID + T R+ + + + GQ ++ K Sbjct: 103 KIELKEVTSKTRIPMLNNGEIDAIIGTMTITEERKKEVDF--SDVYFMAGQSLLVKKDSK 160 Query: 137 ISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I+SV L G ++ G+T+ + + + FE E A +A + DA T Sbjct: 161 INSVKDLKKGMTVLTAKGSTSAQNIRKVAPE----VNVLEFENYAEAFTALKAGQGDALT 216 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 D + L+ + + + +L + SK P + Sbjct: 217 TDNALLWGMAKQDPN---YRVLDETFSKEPYGIGSAKE 251 >gi|229074424|ref|ZP_04207456.1| hypothetical protein bcere0024_5440 [Bacillus cereus Rock4-18] gi|228708708|gb|EEL60849.1| hypothetical protein bcere0024_5440 [Bacillus cereus Rock4-18] Length = 276 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 60/281 (21%), Positives = 108/281 (38%), Gaps = 24/281 (8%) Query: 1 MYKDFFVSIL-CLIILFFTSFSTNAS-----------ILGDIKKRGFLKCGINTGLVGFA 48 M K F + + CL +L + + IKKRG L G+ F Sbjct: 4 MKKLFTLIVFSCLFVLVVAGCGSKKDDVKETNTKQSRAIEQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPMLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKA 166 R+ + + + GQ ++ K I S+ + G + G+T+ + Sbjct: 124 EERKKEVDF--SDVYFKAGQSLLVKKGSNIKSIDDIKQGVKVLAVKGSTSTNNIRQKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDAN---YEVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSK 266 A+ +G + ++ M T+ E + +K I Q + Sbjct: 235 GIAVQKGADDLTKEINNLLKDMKTSGEYDKLYEKWIGQKQE 275 >gi|322373492|ref|ZP_08048028.1| CjaA protein [Streptococcus sp. C150] gi|321278534|gb|EFX55603.1| CjaA protein [Streptococcus sp. C150] Length = 284 Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats. Identities = 61/283 (21%), Positives = 115/283 (40%), Gaps = 25/283 (8%) Query: 2 YKDFFVSILCLIILFFTSF---------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 K F + L ++ T+ + A + +IKK G L+ + F V + Sbjct: 5 KKIFALLALVFALVAVTACSSNSSSGKSTAKARTIAEIKKSGELRIAVFADKKPFGYVDS 64 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G ++G+D++ L+ + P +Y+ ++A R L S ++DI N T R+ Sbjct: 65 KGAYQGYDIELGNRLAKDLGVKP---KYVSVDAANRAEFLISNKVDITLANFTVTDERKK 121 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + A G + K K I V +L G ++ V GTT E YF+ + Sbjct: 122 QVDFAL--PYMKVSIGVVSPKDKVIKDVKELEGKTLIVTKGTTAET----YFEKNYPNIK 175 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 +++ + A R DA++ D + + A L N V + + + +APA+ + Sbjct: 176 LQKYDQYSDAYQALLDGRGDAFSTDNTEVLAWALENK--GYEVGITSLGAPDTIAPAVQK 233 Query: 233 GDTEWYNIVSWTHYAMVTAEE---LGITQKNINQVSKDTTNPD 272 G+ E + ++ + EE +K ++ D+ D Sbjct: 234 GNKELLDFINKDIKKL--GEENFFHKDYEKTLHPTYGDSAKAD 274 >gi|330812332|ref|YP_004356794.1| putative ABC transporter, periplasmic component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380440|gb|AEA71790.1| putative ABC transporter, periplasmic component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 300 Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats. Identities = 55/279 (19%), Positives = 110/279 (39%), Gaps = 13/279 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEV-KANGDW 56 M K + ++L + + A LG I + G V F+ V ++G Sbjct: 1 MQKITLIGCTLSLLLSVQAHANEAPPAGTLGKIASTRSITLGYRDASVPFSYVGDSSGQP 60 Query: 57 KGFDVDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G+ V+ + I + ++Y + ++ R +Q+ +D+ +T T R+ Sbjct: 61 MGYSVELAGKIVERIKTQLALSQLDVKYNLVTSQTRIPLVQNGTVDLECGSTGVTAERQK 120 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + ++ I Y GQ + K GI S + L G ++ AGTT E L Y + +N + Sbjct: 121 QVAFSYGFI-YVKGQ-LLTAKDSGIHSFADLRGKNVVTTAGTTNERFLKSYNQDNNAEMF 178 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 I + E R A+ D + LY + P + V++ S+ + + + Sbjct: 179 IISAKDHGESFQMLETGRAAAFYMDDALLYGERAKARDPHKWVVVGQEQSREIYSCMVRK 238 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 D ++ +V+ T + + E+ ++ + P Sbjct: 239 DDPQFLALVNATLADLYKSGEIN---DIYDRWFQKPIPP 274 >gi|328956549|ref|YP_004373935.1| major cell-binding factor [Carnobacterium sp. 17-4] gi|328672873|gb|AEB28919.1| major cell-binding factor [Carnobacterium sp. 17-4] Length = 274 Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats. Identities = 58/264 (21%), Positives = 107/264 (40%), Gaps = 23/264 (8%) Query: 1 MYKD-FFVSILCLIILFFTSFSTNAS--------------ILGDIKKRGFLKCGINTGLV 45 M K +++ +LF + S++ S + IK+ G LK G+ + Sbjct: 1 MKKRNLLATVILSSVLFLGACSSDDSSTTEADTPKGSDQLTIESIKEAGVLKVGVKEDVP 60 Query: 46 GFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 F + G+ +GF++D + ++ I DP I+ P+ AK R L + ++D++ Sbjct: 61 NFGLKNTDTGEIEGFEIDIAKKIAEDILGDPDAIELTPVTAKTRGPLLDNGEVDMVIATF 120 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164 T R+ + + Y D G ++ K K + + GA++ V +TT +A Sbjct: 121 TVTEERKETYNFSDA--YYEDAVGLLVKKDKNYEGLKDMDGANVGVAQSSTTSEAIASEA 178 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 + +++ + EI AA + R DA++ D S L ILPD + Sbjct: 179 EQYDIAVEFSEYATYPEIKAALDSGRVDAFSVDRSILAGYL-----DDSTEILPDRFATQ 233 Query: 225 PLAPAIIQGDTEWYNIVSWTHYAM 248 A + +TE V+ Sbjct: 234 DYGIATKKTNTELAEHVNGLITTW 257 >gi|172065224|ref|YP_001815936.1| extracellular solute-binding protein [Burkholderia ambifaria MC40-6] gi|171997466|gb|ACB68383.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MC40-6] Length = 313 Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats. Identities = 54/240 (22%), Positives = 98/240 (40%), Gaps = 6/240 (2%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK- 77 + + L ++ G + G + F+ + A G+ ++ C+AL S+I D +K Sbjct: 38 APAQLTGTLAKVRSSGTIALGYRDASIPFSYLNARNQPIGYSIELCKALVSSIEDAVNKS 97 Query: 78 --IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 I+++P+ + R A+ S +D+ +T L R+ + PI + G ++ + Sbjct: 98 LTIRWVPVTSDNRIDAVVSGNVDLECGSTTSNLERQQRVAF--SPIIFVAGTKVMVKRGS 155 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I S L+G + V AGTT E L D + V + A R DA+ Sbjct: 156 PIRSFRDLAGKKVAVTAGTTNEKALRDLDARFKLGIQLQVVPDHAQGFALVANGRADAFA 215 Query: 196 GDISALYALKLTNDRP-SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D LY L N ++ ++ D +S P + D + +V T + E+ Sbjct: 216 TDDVLLYGLIAENAGKGGQYDVVGDYLSYDPYGIMFRKDDPQLAQVVKSTFEELAVDGEI 275 >gi|218895694|ref|YP_002444105.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus G9842] gi|228899325|ref|ZP_04063588.1| hypothetical protein bthur0014_5490 [Bacillus thuringiensis IBL 4222] gi|228963737|ref|ZP_04124879.1| hypothetical protein bthur0004_6060 [Bacillus thuringiensis serovar sotto str. T04001] gi|218544001|gb|ACK96395.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus G9842] gi|228795973|gb|EEM43439.1| hypothetical protein bthur0004_6060 [Bacillus thuringiensis serovar sotto str. T04001] gi|228860356|gb|EEN04753.1| hypothetical protein bthur0014_5490 [Bacillus thuringiensis IBL 4222] Length = 276 Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats. Identities = 59/281 (20%), Positives = 107/281 (38%), Gaps = 24/281 (8%) Query: 1 MYKDFFVSIL-CLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + + CL +L + + IKKRG L G+ F Sbjct: 4 MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPMLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKA 166 R+ + + + GQ ++ K I S+ + G + G+T+ + Sbjct: 124 EERKKEVDF--SDVYFKAGQSLLVKKGSNIKSIDDIKQGVKVLAVKGSTSTNNIRQKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSK 266 A+ +G + ++ M + E + +K I Q + Sbjct: 235 GIAVQKGADDLTKEINNLLKDMKASGEYDKLYEKWIGQKQE 275 >gi|237740706|ref|ZP_04571187.1| solute-binding protein for glutamate/aspartate ABC transporter system [Fusobacterium sp. 2_1_31] gi|229422723|gb|EEO37770.1| solute-binding protein for glutamate/aspartate ABC transporter system [Fusobacterium sp. 2_1_31] Length = 293 Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats. Identities = 51/258 (19%), Positives = 106/258 (41%), Gaps = 18/258 (6%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 + A + +IK G ++ G+ T F + NG +G+DV F L+ + K+ Sbjct: 40 TAVAKARTVQEIKDSGVIRIGVFTDKAPFGYIDENGKNQGYDVYFTDRLAKDLG---VKV 96 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 +Y+ L+ R ++ + DI++ N T R + + G + I Sbjct: 97 EYISLDPASRVEYAETGKADIVAANFTVTPERAEKVDFSL--PYMKVSLGVVSPDGAVIK 154 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 SV +L ++ V GTT E YF ++ + ++ + A R DA++ D Sbjct: 155 SVEELKDKTLIVSKGTTAEY----YFSKNHPEVKLQKYDSYADAYNALLDGRGDAFSTDN 210 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI-- 256 + + A + P V + + +A A+ +G+T ++++W + + + Sbjct: 211 TEVLAWAKS--NPGFTVGIDSLGDVDTIAVAVQKGNT---DLLNWINNEIKELGKENFFH 265 Query: 257 --TQKNINQVSKDTTNPD 272 + + + D+ +PD Sbjct: 266 EAYKATLEPIYGDSADPD 283 >gi|295096060|emb|CBK85150.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 276 Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats. Identities = 65/277 (23%), Positives = 107/277 (38%), Gaps = 15/277 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFD 60 +K + + S A L DIK G +K F + A + G+D Sbjct: 8 FKKRAQVLGLVAAWGLVSAQAQADRLADIKAAGVVKVATFDANPPFGSIDAKTHEIVGYD 67 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDF +AL+ ++ K++ + N R LQS + D++ + T R + Sbjct: 68 VDFAKALAKSLG---VKLELVATNPANRIPLLQSGKADLIVADITITPERAQVIDF--ST 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + GQ F++ K + S A I GTT E L F + + ++ + Sbjct: 123 PYFVTGQQFLVPAKSPDK-LDDYSRARIGAVKGTTGEQALHQRFP----QSRVLSYDDIP 177 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A R A T D + L L ++ ILPD++SK + + +G+T Sbjct: 178 LALTALRNGNVQAITQDSTILAGLLAQAPDKADFKILPDLLSKEEIGVGVKKGETALLRA 237 Query: 241 VSWTHYAMVTAEELGITQKNIN-QVSKDTTNPDVQRF 276 V+ +VT E+ G K + DT P + F Sbjct: 238 VND---ELVTLEKNGQAAKIYDVWFGPDTPAPQPRNF 271 >gi|91778558|ref|YP_553766.1| polar amino acid ABC transporter periplasmic ligand-binding protein [Burkholderia xenovorans LB400] gi|91691218|gb|ABE34416.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia xenovorans LB400] Length = 272 Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats. Identities = 64/280 (22%), Positives = 103/280 (36%), Gaps = 14/280 (5%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFC 64 + + L S + +A L DIKK G L+ F V G D+D+ Sbjct: 5 VLGAVIAGSLLVMSAAAHADRLDDIKKAGVLRVAAFDSNPPFGFVDPKSNQIVGLDIDYA 64 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 RA+++ + K++ P N R L+S ++D++ N T R+ + + I YF Sbjct: 65 RAVANRLG---VKLEVQPTNPANRIAFLKSGKVDLVFANFTITDDRKKEVDFS---IPYF 118 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 + KK ++S QL+ I GTT E + F I ++ A Sbjct: 119 ASGTQFIAKKGTLTSPQQLNSLRIGADKGTTNEQQVRAQFPGA----TIIAYDDTPFAFA 174 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 A R A T D L AL + + I P IS + +G+T N+V+ T Sbjct: 175 ALRTGNVQAITQDGPKLVALLAKVPDKANYEIPPFTISNDYEGVGVPKGETRLLNVVNDT 234 Query: 245 HYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSN 284 E G + + + + R I Sbjct: 235 LK---DLEAKGTAGQIYDTWFGPKSAAPLPRLFKIGDPQK 271 >gi|312863687|ref|ZP_07723925.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus vestibularis F0396] gi|322516243|ref|ZP_08069175.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus vestibularis ATCC 49124] gi|311101223|gb|EFQ59428.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus vestibularis F0396] gi|322125307|gb|EFX96672.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus vestibularis ATCC 49124] Length = 284 Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats. Identities = 62/283 (21%), Positives = 113/283 (39%), Gaps = 25/283 (8%) Query: 2 YKDFFVSILCLIILFFTSF---------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 K F + L ++ T+ + A + +IKK G L+ + F V Sbjct: 5 KKIFALLALVFALVAVTACSSNSSSGKSTAKARTIEEIKKSGELRIAVFADKKPFGYVDN 64 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G ++G+D++ L+ + P +Y+ ++A R L S ++DI N T R+ Sbjct: 65 KGAYQGYDIELGNRLAKDLGVKP---KYVSVDAANRAEFLISNKVDITLANFTVTDERKK 121 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + A G + K K I V +L G ++ V GTT E YF+ + Sbjct: 122 QVDFAL--PYMKVSIGVVSPKDKVIKDVKELEGKTLIVTKGTTAET----YFEKNYPNIK 175 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 +++ + A R DA++ D + + A L N V + + +APA+ + Sbjct: 176 LQKYDQYSDAYQALLDGRGDAFSTDNTEVLAWALENK--GYEVGITSLGDPDTIAPAVQK 233 Query: 233 GDTEWYNIVSWTHYAMVTAEE---LGITQKNINQVSKDTTNPD 272 G+ E + ++ + EE +K ++ D N D Sbjct: 234 GNKELLDFINKDIKKL--GEENFFHKDYEKTLHPTYGDAANAD 274 >gi|134291750|ref|YP_001115519.1| extracellular solute-binding protein [Burkholderia vietnamiensis G4] gi|134134939|gb|ABO59264.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia vietnamiensis G4] Length = 296 Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 94/268 (35%), Gaps = 7/268 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M F + L+ S + A L I + G + V F+ + GF Sbjct: 1 MRHRSFAVLATLLAACVASTAACAQTLDKISRSGRIVVSYREAAVPFSYLLTPHKAVGFS 60 Query: 61 VDFCRALSSAIFD----DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 VD A+ + ++ Y+P+ + R L D+ +T T R + Sbjct: 61 VDVTEAIVDDVRKTLRRPDLRVAYVPVTGQNRIPLLVDGSYDLECGSTTNTSARGKDVAF 120 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + ++ G + + I + L+ ++ AG+T E TL A ++ ++ Sbjct: 121 SIN--YFYAGTRLMAKRASHIGDYADLAHQAVATVAGSTNEKTLRRELAARHIDADVVLA 178 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + + A D LY L+ D P V+ D + P A + + D Sbjct: 179 KDYADALQMVATDKVAALALDDVLLYGLRANADDPGSWVVAGDALQVEPYACMVRKDDPA 238 Query: 237 WYNIVSWTHYAMVTAEELG-ITQKNINQ 263 + +V T ++ + E + K Sbjct: 239 FKRLVDGTLTRLIRSGEFARLYAKWFES 266 >gi|228957061|ref|ZP_04118835.1| hypothetical protein bthur0005_5930 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228802621|gb|EEM49464.1| hypothetical protein bthur0005_5930 [Bacillus thuringiensis serovar pakistani str. T13001] Length = 276 Score = 200 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 60/278 (21%), Positives = 106/278 (38%), Gaps = 24/278 (8%) Query: 1 MYKDFFVSIL-CLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + + CL +L + + IKKRG L G+ F Sbjct: 4 MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPMLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKA 166 R+ + + + GQ ++ K I SV + G + G+T+ + Sbjct: 124 EERKKEVDF--SDVYFKAGQSLLVKKGSNIKSVDDIKQGVKVLAVKGSTSTNNIRQKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQ 263 A+ +G + ++ M + E + +K I Q Sbjct: 235 GIAVQKGADDLTKEINTLIKDMKASGEYDKLYEKWIGQ 272 >gi|229177165|ref|ZP_04304554.1| hypothetical protein bcere0005_5410 [Bacillus cereus 172560W] gi|228606346|gb|EEK63778.1| hypothetical protein bcere0005_5410 [Bacillus cereus 172560W] Length = 276 Score = 200 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 60/278 (21%), Positives = 106/278 (38%), Gaps = 24/278 (8%) Query: 1 MYKDFFVSIL-CLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + + CL +L + + IKKRG L G+ F Sbjct: 4 MKKLFTLIVFSCLFVLVVAGCGSKKDEVKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPMLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKA 166 R+ + + + GQ ++ K I SV + G + G+T+ + Sbjct: 124 EERKKEVDF--SDVYFKAGQSLLVKKGSNIKSVDDIKQGVKVLAVKGSTSTNNIRQKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQ 263 A+ +G + ++ M + E + +K I Q Sbjct: 235 GIAVQKGADDLTKEINTLIKDMKASGEYDKLYEKWIGQ 272 >gi|269139977|ref|YP_003296678.1| glutamate and aspartate transporter subunit [Edwardsiella tarda EIB202] gi|267985638|gb|ACY85467.1| glutamate and aspartate transporter subunit [Edwardsiella tarda EIB202] gi|304559810|gb|ADM42474.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Edwardsiella tarda FL6-60] Length = 300 Score = 200 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 47/245 (19%), Positives = 92/245 (37%), Gaps = 8/245 (3%) Query: 15 LFFTSFSTN--ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72 LF + + L IK G + G V F+ G+ D+ A+ A+ Sbjct: 17 LFVAAQDATDGSPTLQKIKDSGVIVVGHRESSVPFSYYDNQQRVVGYSQDYANAIVDAVK 76 Query: 73 D----DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 +++ LP+ ++ R LQ+ D+ +T R+ + + G Sbjct: 77 KQLNLPALQVKLLPITSQNRIPLLQNGTYDVECGSTTHNAERQQQVAF--SNTLFIVGTR 134 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 + K+ G+ L+G + V +GTT+E+ L + +MK I + + + Sbjct: 135 LLTAKESGVHDFRDLAGKPVVVTSGTTSEIMLNRMNEKDDMKMRIISAKDHGDAFRTLES 194 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 R A+ D + L + +P VI+ S + + D + +V T + Sbjct: 195 GRAVAFMMDDALLAGERAKAKQPERWVIVGTPQSYEAYGCMLRRDDPAFKKLVDDTIAHV 254 Query: 249 VTAEE 253 T+ + Sbjct: 255 QTSGQ 259 >gi|257461201|ref|ZP_05626299.1| acriflavine resistance protein [Campylobacter gracilis RM3268] gi|257441575|gb|EEV16720.1| acriflavine resistance protein [Campylobacter gracilis RM3268] Length = 286 Score = 200 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 64/287 (22%), Positives = 112/287 (39%), Gaps = 26/287 (9%) Query: 2 YKDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTGLVGF 47 K ++ L LFF + S + IKKRG ++ + F Sbjct: 1 MKKTLSTLFILGALFFAGCNDEGKGSSNSAQGSAAPQSYIDGIKKRGVVRIAVFGDKPPF 60 Query: 48 AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G G+DV F + ++ + D SK+Q++ + A R L S ++DI N T Sbjct: 61 GYIDETGKNAGYDVYFAKRIAKELLGDESKVQFVLVEAANRAEFLASDKVDITLANFTVT 120 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 R+ + A Y + K I+ VSQL ++ + GTT +L YF + Sbjct: 121 PERKEVVDFAL---PYMKVALGVASKDGDITDVSQLKDKTLLINKGTTADL----YFTKN 173 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 + + + F++ E A R DA D + L+A T P V + + + +A Sbjct: 174 HPEIKLLKFDQNTETFGAMLDGRGDAIAHDNTLLFAW--TKSNPGFKVGIRSLGDQDVIA 231 Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 PA+ +G+ E W +V + + + D++ Sbjct: 232 PAVKKGNDELR---KWLDDLIVKLADEKFFHADYDATLAPVYGDDIK 275 >gi|251796879|ref|YP_003011610.1| extracellular solute-binding protein family 3 [Paenibacillus sp. JDR-2] gi|247544505|gb|ACT01524.1| extracellular solute-binding protein family 3 [Paenibacillus sp. JDR-2] Length = 282 Score = 200 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 65/287 (22%), Positives = 116/287 (40%), Gaps = 32/287 (11%) Query: 1 MYKDFFVSILCLIILFFT--------------------SFSTNASILGDIKKRGFLKCGI 40 M K ++++ + T S S +AS L IK RG L G+ Sbjct: 1 MKKKSWMTLGIALTFLATALLAGCSSKEGGDGNGANGESASGSASALESIKNRGKLVVGV 60 Query: 41 NTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99 F A+G +GFDVD +AL+ I D +KI+ + +K R L + ID+ Sbjct: 61 KYDTKLFGLKDPASGSVEGFDVDIAKALAKEILGDETKIELKEVTSKTRIPMLNNNDIDM 120 Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTEL 158 + T R+ + + + GQ ++ K I S+ + G + G+T+ Sbjct: 121 IVATMTITEERKKEVDF--SDVYFKAGQSLLVKKGSPIKSIDDIKKGTKVLAVKGSTSV- 177 Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218 D KA + F+ ++ +A +A + D T D + LY + + + + ++ Sbjct: 178 ---DNIKAKAPDATILEFDNYQDAFSALKAGQGDTLTTDNAILYGMAVQDPN---YEVVG 231 Query: 219 DIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQV 264 + + P AI +G T+ N V+ + E I +K I + Sbjct: 232 EPFTDEPYGIAIKKGATDLLNSVNAGLKKLHDNGEYDKIYEKWIGKA 278 >gi|206967952|ref|ZP_03228908.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus AH1134] gi|228906387|ref|ZP_04070271.1| hypothetical protein bthur0013_5700 [Bacillus thuringiensis IBL 200] gi|228951131|ref|ZP_04113247.1| hypothetical protein bthur0006_5580 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229077953|ref|ZP_04210562.1| hypothetical protein bcere0023_6430 [Bacillus cereus Rock4-2] gi|229108249|ref|ZP_04237871.1| hypothetical protein bcere0018_5390 [Bacillus cereus Rock1-15] gi|229143367|ref|ZP_04271798.1| hypothetical protein bcere0012_5390 [Bacillus cereus BDRD-ST24] gi|206736872|gb|EDZ54019.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus AH1134] gi|228640174|gb|EEK96573.1| hypothetical protein bcere0012_5390 [Bacillus cereus BDRD-ST24] gi|228675265|gb|EEL30487.1| hypothetical protein bcere0018_5390 [Bacillus cereus Rock1-15] gi|228705291|gb|EEL57668.1| hypothetical protein bcere0023_6430 [Bacillus cereus Rock4-2] gi|228808541|gb|EEM55044.1| hypothetical protein bthur0006_5580 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228853299|gb|EEM98072.1| hypothetical protein bthur0013_5700 [Bacillus thuringiensis IBL 200] Length = 276 Score = 200 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 60/278 (21%), Positives = 106/278 (38%), Gaps = 24/278 (8%) Query: 1 MYKDFFVSIL-CLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + + CL +L + + IKKRG L G+ F Sbjct: 4 MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPMLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKA 166 R+ + + + GQ ++ K I SV + G + G+T+ + Sbjct: 124 EERKKEVDF--SDVYFKAGQSLLVKKGSNIKSVDDIKQGVKVLAVKGSTSTNNIRQKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQ 263 A+ +G + ++ M + E + +K I Q Sbjct: 235 GIAVQKGADDLTKEINTLIKDMKASGEYDKLYEKWIGQ 272 >gi|146339752|ref|YP_001204800.1| glutamate/aspartate periplasmic-binding protein [Bradyrhizobium sp. ORS278] gi|146192558|emb|CAL76563.1| Putative extracellular solute-binding protein, family 3 ; putative glutamate/aspartate periplasmic-binding protein [Bradyrhizobium sp. ORS278] Length = 302 Score = 200 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 94/261 (36%), Gaps = 9/261 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTN--ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M ++ + L +K+ G + G + F+ + N G Sbjct: 1 MKTSRLLAYALFATMLAAPALAEDLTGTLQKVKETGTITIGYRETSLPFSYIDDNQKPLG 60 Query: 59 FDVDFCRALSSAIFD----DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 F +D C + I D +++ P+++ R + + ID+ +T L R+ + Sbjct: 61 FALDICGKIVDEIKATLKLDKLEVKLTPVSSATRIPLMANGTIDLECASTTNNLERQRLV 120 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + + ++ G+ ++ L G ++ +GT+ L + A + + + Sbjct: 121 SFSH--TYFLTASRYVAKAASGLKTIDDLKGKTVASTSGTSNIKQLYEANTARQLGLNIV 178 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS-KSPLAPAIIQG 233 + E R DAY D L L + PS++ I D S P + + Sbjct: 179 AAKDNAEGFLMVENGRADAYVMDDILLAGLVASAKAPSDYAISTDQFSMPEPYGIMLRKD 238 Query: 234 DTEWYNIVSWTHYAMVTAEEL 254 D + +V + T+ E+ Sbjct: 239 DPAFKTVVDRATAKLYTSPEI 259 >gi|72383932|ref|YP_293286.1| extracellular solute-binding protein [Ralstonia eutropha JMP134] gi|72123275|gb|AAZ65429.1| extracellular solute-binding protein, family 3 [Ralstonia eutropha JMP134] Length = 289 Score = 200 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 46/258 (17%), Positives = 96/258 (37%), Gaps = 9/258 (3%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA----IFD 73 + +A L + G + V F+ + GF VD A+ + Sbjct: 11 AAAGVHAETLEKVAATGRITVAYREAAVPFSYLLGPHKAVGFSVDLTEAIVDDVRSRLKQ 70 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 K++Y+P+ + R L + D+ +T T +R + + ++ G + + Sbjct: 71 PDLKVEYIPVTGQNRIPLLVNGTYDLECGSTTNTSMRGKEVAFSIN--FFYAGTRLLTKR 128 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 GI+ + L+ ++ AG+T E + + +N+ I + + R A Sbjct: 129 DSGINGYADLAKKTVASTAGSTNEKVVRKHGADNNIDVQMISGKDYADALQLVENDRASA 188 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 D L+ L+ + PS I+ D + P A + + D E+ +V T ++ + E Sbjct: 189 LALDDVLLFGLRANSRNPSSLEIVGDTLQVEPYACMVRKDDAEFKKLVDGTITRLMKSGE 248 Query: 254 LGITQKNINQVSKDTTNP 271 + + + P Sbjct: 249 ---FSRLYKKWFESPIPP 263 >gi|224367959|ref|YP_002602122.1| GltB1 [Desulfobacterium autotrophicum HRM2] gi|223690675|gb|ACN13958.1| GltB1 [Desulfobacterium autotrophicum HRM2] Length = 290 Score = 200 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 56/271 (20%), Positives = 103/271 (38%), Gaps = 10/271 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++ + FTS + L I G G + F A + GF Sbjct: 1 MRKPLLFGTILMLFMVFTSGAFAGDTLKKISDSNKFIVGARDGAIPFGFHNAENEHVGFS 60 Query: 61 VDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 +D + L A+ P + + +N K R + + ++++ T+ RE ++ + Sbjct: 61 IDLAKELHKALEERLGKPLEFEIKVVNPKTRIPLVANGNLNMVCGAATHTVPREDTVDFS 120 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA--HNMKYHPIV 175 + G + K G LSG I G+T E T+ + ++ N +V Sbjct: 121 L--TFFLTGSQLLAKKSGGYMVAKDLSGKKIGAAQGSTNEKTIRNLNESGYFNPPVKLVV 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 ++ + A R +AY GD S L +K P +VIL +++S P + + D+ Sbjct: 179 YQEHTQGMLALRNGAINAYCGDGSHLAGMKAKAMDPDNYVILGELLSYDPYGFILPENDS 238 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 + + V+ M G K + Sbjct: 239 NFKDFVNEQLIRMFV---DGRYMKYYEKWFG 266 >gi|167576714|ref|ZP_02369588.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia thailandensis TXDOH] Length = 299 Score = 200 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 47/271 (17%), Positives = 92/271 (33%), Gaps = 10/271 (3%) Query: 1 MYKDF---FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K F + + + L I+ G + G+ V F+ Sbjct: 1 MMKPFRPLLSIAVGCALAAAAHAEDASPTLKKIRDTGVVTLGVRESSVPFSYYDQRQQTI 60 Query: 58 GFDVDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ + + I + ++ ++ +P+ ++ R +Q+ +D+ +T T R Sbjct: 61 GYSQEIALKIVDEIKKELNRTNLTVREIPITSQNRIPLVQNGTVDLECGSTTHTKERANQ 120 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + + Y G I K G+ L+G ++ AGTT E L + M Sbjct: 121 VSFSNSIFQY--GMRLIAKKSSGVKDFPDLAGKTVATTAGTTEERLLRQWNAEKGMSMQI 178 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + + ++ R A+ D LY K P ++VI + + Sbjct: 179 ISAKDHADAFLNVKSGRAVAFFMDEPLLYGAKAKEANPGDYVITGSSPVSEAYGCMLRKD 238 Query: 234 DTEWYNIVSWTHYAMVTAEE-LGITQKNINQ 263 D + + M + E + K N+ Sbjct: 239 DPGFKQLADRVIARMQRSGEAEALYVKWFNR 269 >gi|160896811|ref|YP_001562393.1| extracellular solute-binding protein [Delftia acidovorans SPH-1] gi|160362395|gb|ABX34008.1| extracellular solute-binding protein family 3 [Delftia acidovorans SPH-1] Length = 299 Score = 200 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 52/275 (18%), Positives = 105/275 (38%), Gaps = 11/275 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +I + ++F+ L IK G + G+ G NG + GF Sbjct: 1 MKKHLL-AIAVTALAAGSAFAQAGDTLAKIKSSGAVTLGVRESS-GLGYTLGNGKYVGFH 58 Query: 61 VDFCRA----LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 + + + I+Y P+ ++ R + + +D+ +T + R+ + Sbjct: 59 TEMGERVLADIQKELGLAKLDIKYQPVTSQNRIPLVTNGTVDLECGSTTNSQARQKDVAF 118 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 A TY + + GI+ + L+G +I GTT+ TL +A + + ++ Sbjct: 119 AV--TTYVEEVRIAVKGNSGITGIKDLNGKTIVTTTGTTSVQTLRKNKRADGLTFKEVMG 176 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + R DA+ D S L A + P+++ I+ + +S P+A + + D Sbjct: 177 KDHADSFLMLETGRADAFIMDGSILAANISKSKAPADYKIVGETLSVEPIACMLRKDDPA 236 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + V + + G K ++ P Sbjct: 237 FKKAVDDSIKRQIA---DGSLAKLYDKWFMQPIPP 268 >gi|300705161|ref|YP_003746764.1| glutamate/aspartate ABC transporter periplasmic-binding protein [Ralstonia solanacearum CFBP2957] gi|299072825|emb|CBJ44181.1| glutamate/aspartate transport protein; ABC superfamily, periplasmic binding component [Ralstonia solanacearum CFBP2957] Length = 298 Score = 200 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 47/270 (17%), Positives = 98/270 (36%), Gaps = 9/270 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M ++L + + ++ L IK G + G+ + F+ G Sbjct: 1 MNLAKLATVLAAVGVLSSAAHAQELTGTLKKIKDTGTITLGVRDSSIPFSYNVGGVRTIG 60 Query: 59 FDVDFCRALSSAIFD----DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + D + A+ D +++ +P+ ++ R LQ+ ID+ +T L R+ Sbjct: 61 YSYDVATKIVEAVKDQLKLKDLQVKEIPVTSQNRITLLQNGTIDLECGSTTNNLERQKQA 120 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + G ++ K GI + L G ++ AGTT+E L + + I Sbjct: 121 SF--TDTIFIIGTRIMVKKDSGIKDWADLKGKNVVTTAGTTSERLLRKMNDDKQLGMNII 178 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + + R A+ D + LY + P++ V++ S+ + + D Sbjct: 179 STKDHGQSFLTLESGRAVAFMMDDALLYGERAKAKNPADWVVVAKPQSREAYGCMVRKDD 238 Query: 235 TEWYNIVSWTHYAMVTAEEL-GITQKNINQ 263 + + T M+ + +K Q Sbjct: 239 APFKALADKTIAGMMKDGSIVAEYKKWFEQ 268 >gi|229068325|ref|ZP_04201628.1| hypothetical protein bcere0025_5400 [Bacillus cereus F65185] gi|228714786|gb|EEL66658.1| hypothetical protein bcere0025_5400 [Bacillus cereus F65185] Length = 273 Score = 200 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 60/278 (21%), Positives = 106/278 (38%), Gaps = 24/278 (8%) Query: 1 MYKDFFVSIL-CLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + + CL +L + + IKKRG L G+ F Sbjct: 1 MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 60 Query: 49 EVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 61 LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPMLKNGDIDAIIATMTIT 120 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKA 166 R+ + + + GQ ++ K I SV + G + G+T+ + Sbjct: 121 EERKKEVDF--SDVYFKAGQSLLVKKGSNIKSVDDIKQGVKVLAVKGSTSTNNIRQKSPE 178 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 179 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 231 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQ 263 A+ +G + ++ M + E + +K I Q Sbjct: 232 GIAVQKGADDLTKEINTLIKDMKASGEYDKLYEKWIGQ 269 >gi|66047135|ref|YP_236976.1| extracellular solute-binding protein [Pseudomonas syringae pv. syringae B728a] gi|63257842|gb|AAY38938.1| extracellular solute-binding protein, family 3 [Pseudomonas syringae pv. syringae B728a] Length = 333 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 47/264 (17%), Positives = 92/264 (34%), Gaps = 9/264 (3%) Query: 5 FFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVD 62 + + ++ F+ L IK+ G + G + F+ + A+G G+ D Sbjct: 36 LLGAAITAALISTPVFAAELTGTLKKIKESGTITLGHRDASIPFSYIADASGVPVGYSHD 95 Query: 63 FCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 + AI D K++Y + ++ R +Q+ +D+ +T + R+ + + Sbjct: 96 IQLKIVEAIKKDLDMPDLKVKYNLVTSQTRIPLVQNGTVDVECGSTTNNVERQQQVDFSI 155 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + G + K L G ++ AGTT+E L M + I + Sbjct: 156 GI--FEVGTRLLSKKNSSYKDFDDLKGKNVVTTAGTTSERILKAMNADKQMGMNVISAKD 213 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E + R A+ D + L +P + + S + +GD + Sbjct: 214 HGESFQMLESGRAVAFMMDDALLAGEMAKAKKPDDWAVTGTAQSYEIYGCMVRKGDAPFK 273 Query: 239 NIVSWTHYAMVTAEELG-ITQKNI 261 V A + E+ I K Sbjct: 274 KAVDDAIVATYKSGEINAIYSKWF 297 >gi|310644452|ref|YP_003949211.1| amino-acid abc transporter periplasmic solute-binding protein [Paenibacillus polymyxa SC2] gi|309249403|gb|ADO58970.1| Amino-acid ABC transporter periplasmic solute-binding protein [Paenibacillus polymyxa SC2] Length = 292 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 63/255 (24%), Positives = 111/255 (43%), Gaps = 17/255 (6%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 +S S + + DIKK G ++ G+ F V + G +GFDV + + + D Sbjct: 32 GSSSGSAKFASIEDIKKNGKIRIGVFADKPPFGYVDSEGKNQGFDVYIAKRFAKDLLGDE 91 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 SK++++ ++A R L+S ++DI+ N T R+ + A G + Sbjct: 92 SKVEFVLVDAASRVAYLESNKVDIIMANFTVTDERKEKVDFAN--PYMKLSFGIVSPDSA 149 Query: 136 GISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 I+++ QL G+ + V GTT E YF + + F++ EI +A + R A Sbjct: 150 PITTIDQLKGSDQKLIVAKGTTAET----YFTKNYPDIKLLKFDQYTEIFSALKDKRGAA 205 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 D + L A P V +P + +APA+ +G+ E + W + + T + Sbjct: 206 IANDNTELIAWAKA--NPGFTVSIPAFGGQDTIAPAVAKGNKELLD---WINNELATLGK 260 Query: 254 LGITQKNINQVSKDT 268 ++Q KDT Sbjct: 261 ENF----VHQAYKDT 271 >gi|228937878|ref|ZP_04100506.1| hypothetical protein bthur0008_5540 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228977334|ref|ZP_04137729.1| hypothetical protein bthur0002_5490 [Bacillus thuringiensis Bt407] gi|228782311|gb|EEM30494.1| hypothetical protein bthur0002_5490 [Bacillus thuringiensis Bt407] gi|228821784|gb|EEM67784.1| hypothetical protein bthur0008_5540 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326938356|gb|AEA14252.1| glutamine-binding protein [Bacillus thuringiensis serovar chinensis CT-43] Length = 276 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 59/281 (20%), Positives = 106/281 (37%), Gaps = 24/281 (8%) Query: 1 MYKDFFVSIL-CLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + + CL +L + + IKKRG L G+ F Sbjct: 4 MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDIAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKA 166 R+ + + + GQ ++ K I S+ + G + G+T+ + Sbjct: 124 EERKKEVDF--SDVYFKAGQSLLVKKGSNIKSIDDIKQGVKVLAVKGSTSTNNIRQKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSK 266 A+ +G + ++ M E + +K I Q + Sbjct: 235 GIAVQKGADDLTKEINSLLKDMKANGEYDKLYEKWIGQKQE 275 >gi|229159720|ref|ZP_04287729.1| hypothetical protein bcere0009_5230 [Bacillus cereus R309803] gi|228623745|gb|EEK80562.1| hypothetical protein bcere0009_5230 [Bacillus cereus R309803] Length = 276 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 59/281 (20%), Positives = 106/281 (37%), Gaps = 24/281 (8%) Query: 1 MYKDFFVSIL-CLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + + CL +L + + IKKRG L G+ F Sbjct: 4 MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAIEQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDIAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKA 166 R+ + + + GQ ++ K I S+ + G + G+T+ + Sbjct: 124 EERKKEVDF--SDVYFKAGQSLLVKKGSNIKSIDDIKQGVKVLAVKGSTSTNNIRQKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSK 266 A+ +G + ++ M E + +K I Q + Sbjct: 235 GIAVQKGAEDLTKEINSLLKDMKANGEYDKLYEKWIGQKQE 275 >gi|294497132|ref|YP_003560832.1| glutamine ABC transporter glutamine-binding protein GlnH [Bacillus megaterium QM B1551] gi|294347069|gb|ADE67398.1| glutamine ABC transporter, glutamine-binding protein GlnH [Bacillus megaterium QM B1551] Length = 271 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 56/250 (22%), Positives = 105/250 (42%), Gaps = 12/250 (4%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDP 75 + S L +IK RG + G+ F G+ +GFDVD + L+ I D Sbjct: 31 TSGSSAKKDALTEIKDRGKIVIGVKNDTRLFGLKNPKTGEVEGFDVDISKQLAKEILGDE 90 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 +K+++ + +K R LQ ID + T R+ + + + GQ ++ K Sbjct: 91 NKVEFKEVTSKTRVPLLQKGDIDAVVATMTITDERKKEVDF--TDVYFQAGQSLLVKKGS 148 Query: 136 GISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I SV L G + G+T+ + + + + FE E A ++ + DA Sbjct: 149 KIKSVDDLKKGTKVLAVKGSTSAINIREKAPET----TVLEFENYAEAFTALKSKQGDAL 204 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 T D + LY + ++ PS + ++ ++ P A+ +G+ E + ++ + + + Sbjct: 205 TTDDAILYGMA--DEDPS-YELVGKPFTEEPYGIAVKKGNKELVDALNDALKKIKDSGKY 261 Query: 255 G-ITQKNINQ 263 I K I Q Sbjct: 262 DEIHDKWIKQ 271 >gi|307710649|ref|ZP_07647082.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus mitis SK564] gi|307618592|gb|EFN97735.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus mitis SK564] Length = 264 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 60/266 (22%), Positives = 109/266 (40%), Gaps = 16/266 (6%) Query: 1 MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVK-ANGDWK 57 M K FF+S L + + + A + DI+KRG L G+ + F G + Sbjct: 1 MKKKFFLSALLISLFGLAATKPVQADTSVADIQKRGELVVGVKQDVPNFGYKDPKTGTYS 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G + D + ++ + K++Y+P+ A+ R L ++Q+D+ T R+ Sbjct: 61 GIETDLAKMVADEL---KVKVRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKLYNF- 116 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y D GF+++K I + L+G +I V G+ T+ + + K +K+ + Sbjct: 117 -TNPYYTDASGFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVELG 175 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E+ + AHR DA++ D S L V+L D S + +TE Sbjct: 176 SYPELITSLHAHRIDAFSVDRSILSGYISK-----RTVLLDDSFKPSDYGIVTKKSNTEL 230 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQ 263 + + + G QK ++ Sbjct: 231 SDYLDTLVTKW---SKDGSLQKLYDR 253 >gi|120612710|ref|YP_972388.1| extracellular solute-binding protein [Acidovorax citrulli AAC00-1] gi|120591174|gb|ABM34614.1| amino acid ABC transporter substrate-binding protein, PAAT family [Acidovorax citrulli AAC00-1] Length = 300 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 53/259 (20%), Positives = 105/259 (40%), Gaps = 10/259 (3%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS----SAIFD 73 ++F+ L IK G + G+ G + +G + GF D C + + Sbjct: 17 SAFAQANDTLAKIKASGTITEGVRESS-GLSYTLGDGKYTGFHYDVCARVISDVQKQLGL 75 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 + +Y P+ ++ R +Q+ +DI +T R+ + A TY + + Sbjct: 76 SKLETRYQPVTSQNRIPLVQNGTVDIECGSTTNNQARQKDVAFAV--TTYVEEVRIAVKA 133 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 GIS + L+G +I GTT+ TL +A + + + + + + R DA Sbjct: 134 NSGISGIKDLNGKTIATTTGTTSVQTLRKNKRAEGLTFKEVFGKDHSDSFLLLESGRADA 193 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 + D S L + + P++ I+ + +S P+A I + D + V + M+ + E Sbjct: 194 FIMDGSILASNIAKSKAPNDFKIVGETLSVEPIAIMIRKDDPAFKKAVDDSLKGMMKSGE 253 Query: 254 LGITQKNINQVSKDTTNPD 272 + K ++ P+ Sbjct: 254 M---AKLYDKWFMQPIPPN 269 >gi|330973079|gb|EGH73145.1| extracellular solute-binding protein [Pseudomonas syringae pv. aceris str. M302273PT] Length = 304 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 47/264 (17%), Positives = 92/264 (34%), Gaps = 9/264 (3%) Query: 5 FFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVD 62 + + ++ F+ L IK+ G + G + F+ + A+G G+ D Sbjct: 7 LLGAAITAALISTPVFAAELTGTLKKIKESGTITLGHRDASIPFSYIADASGVPVGYSHD 66 Query: 63 FCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 + AI D K++Y + ++ R +Q+ +D+ +T + R+ + + Sbjct: 67 IQLKIVEAIKKDLDMPDLKVKYNLVTSQTRIPLVQNGTVDVECGSTTNNVERQQQVDFSI 126 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + G + K L G ++ AGTT+E L M + I + Sbjct: 127 GI--FEVGTRLLAKKDSSYKDFDDLKGKNVVTTAGTTSERILKAMNTDKQMGMNVISAKD 184 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E + R A+ D + L +P + + S + +GD + Sbjct: 185 HGESFQMLESGRAVAFMMDDALLAGEMAKAKKPDDWAVTGTAQSYEIYGCMVRKGDAPFK 244 Query: 239 NIVSWTHYAMVTAEELG-ITQKNI 261 V A + E+ I K Sbjct: 245 KAVDDAIVATYKSGEINAIYSKWF 268 >gi|228970759|ref|ZP_04131399.1| hypothetical protein bthur0003_5460 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228788884|gb|EEM36823.1| hypothetical protein bthur0003_5460 [Bacillus thuringiensis serovar thuringiensis str. T01001] Length = 273 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 59/281 (20%), Positives = 106/281 (37%), Gaps = 24/281 (8%) Query: 1 MYKDFFVSIL-CLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + + CL +L + + IKKRG L G+ F Sbjct: 1 MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 60 Query: 49 EVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 61 LKNPSTGQVEGFDVDIAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 120 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKA 166 R+ + + + GQ ++ K I S+ + G + G+T+ + Sbjct: 121 EERKKEVDF--SDVYFKAGQSLLVKKGSNIKSIDDIKQGVKVLAVKGSTSTNNIRQKSPE 178 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 179 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 231 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSK 266 A+ +G + ++ M E + +K I Q + Sbjct: 232 GIAVQKGADDLTKEINSLLKDMKANGEYDKLYEKWIGQKQE 272 >gi|83745670|ref|ZP_00942728.1| Glutamate/aspartate-binding protein [Ralstonia solanacearum UW551] gi|83727747|gb|EAP74867.1| Glutamate/aspartate-binding protein [Ralstonia solanacearum UW551] Length = 319 Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats. Identities = 52/276 (18%), Positives = 102/276 (36%), Gaps = 9/276 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + L++ + ++S L IK G ++ V F+ + A G G+ Sbjct: 24 MLPRVRKLLPALLVFPLMNAVASSSTLDRIKATGAIRLAHRESSVPFSYLDAGGKPIGYS 83 Query: 61 VDFCRALSSAI----FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +D C L AI K+QY+ + R A+ + + D+ +T+ RE + Sbjct: 84 MDLCMRLVDAIRENLKRPDLKVQYVQVTPATRMDAIMNGKADLECASTNN--ARERREKV 141 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 AF Y ++ GI + L G ++ G+ + +A + + Sbjct: 142 AFTIPHYIANGRMLVKTASGIQKLEDLRGKTVVSTRGSANGDLVRQLSEAGGLGITVVEA 201 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + A + A+ D L +K T P+++ I+ P A + + D E Sbjct: 202 SDHAQSFAMLADGKAQAFAMDDVLLAGMKATAKNPADYAIVGKTQQVVPYAIMLNKNDPE 261 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272 + ++ AM E G ++ + + P+ Sbjct: 262 FKKLID---AAMSRLMEDGEAERFYKKWFQQPIPPN 294 >gi|229101400|ref|ZP_04232144.1| hypothetical protein bcere0019_5790 [Bacillus cereus Rock3-28] gi|228682105|gb|EEL36238.1| hypothetical protein bcere0019_5790 [Bacillus cereus Rock3-28] Length = 276 Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats. Identities = 61/281 (21%), Positives = 108/281 (38%), Gaps = 24/281 (8%) Query: 1 MYKDFFVSIL-CLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + + CL +L + + IKKRG L G+ F Sbjct: 4 MKKLFTLIVFSCLFVLVVAGCGSKKDDVKETNTKQGGAIEQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPMLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKA 166 R+ + + + GQ ++ K I S+ + G + G+T+ + Sbjct: 124 EERKKEVDF--SDVYFKAGQSLLVKKGSNIKSIDDIKQGVKVLAVKGSTSTNNIRQKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDAN---YEVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSK 266 AI +G + ++ M T+ E + +K I Q + Sbjct: 235 GIAIQKGADDLTKEINNLLKDMKTSGEYDKLYEKWIGQKQE 275 >gi|17545200|ref|NP_518602.1| amino-acid-binding periplasmic (PBP) ABC transporter protein [Ralstonia solanacearum GMI1000] gi|17427491|emb|CAD14009.1| probable amino-acid-binding periplasmic (pbp) abc transporter protein [Ralstonia solanacearum GMI1000] Length = 313 Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats. Identities = 47/270 (17%), Positives = 97/270 (35%), Gaps = 9/270 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M ++L I + ++ L IK G + G+ + F+ G Sbjct: 16 MNLAKLATVLAAIGVLSSAAHAQELTGTLKKIKDTGTITLGVRDSSIPFSYNVGGVRTIG 75 Query: 59 FDVDFCRALSSAIFD----DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + D + A+ + +++ +P+ ++ R LQ+ ID+ +T L R+ Sbjct: 76 YSYDVATKVVEAVKEQLKLKDLQVKEIPVTSQNRITLLQNGTIDLECGSTTNNLERQKQA 135 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + G ++ K GI L G ++ AGTT+E L + + I Sbjct: 136 SF--TNTIFIIGTRMMVKKDSGIKDWVDLKGKNVVTTAGTTSERLLRKMNDEKQLGMNII 193 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + + R A+ D + LY + P++ V++ S+ + + D Sbjct: 194 STKDHGQSFLTLESGRAVAFMMDDALLYGERAKAKTPADWVVVGKPQSREAYGCMVRKDD 253 Query: 235 TEWYNIVSWTHYAMVTAEELGI-TQKNINQ 263 + + T M+ + +K Q Sbjct: 254 APFKTLADKTIAGMMKDGSINAEYKKWFEQ 283 >gi|73540163|ref|YP_294683.1| extracellular solute-binding protein [Ralstonia eutropha JMP134] gi|72117576|gb|AAZ59839.1| extracellular solute-binding protein, family 3 [Ralstonia eutropha JMP134] Length = 299 Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats. Identities = 51/271 (18%), Positives = 97/271 (35%), Gaps = 10/271 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS---ILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M S++ LF S L IK G + G+ + F Sbjct: 1 MKFAKLASLMMAAGLFCGSAQAAEQLTGTLKKIKDTGVITLGVRDSSIPFNYNLGGVRQV 60 Query: 58 GFDVDFCRALSSAIFD----DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ D + AI D +++ +P+ ++ R LQ+ IDI +T L R+ Sbjct: 61 GYSYDINMKIVEAIKDQLKMPNLQVKEIPITSQNRITLLQNGTIDIECGSTTNNLERQKQ 120 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + + G ++ K GI + L G ++ AGTT+E L + + Sbjct: 121 VSFTDSI--FIIGTRIMVKKDGGIKDWADLKGKNVVTTAGTTSERLLRKMNDDQKLGMNI 178 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + + + R A+ D + LY + P++ +++ S+ I + Sbjct: 179 ISTKDHGQSFLTLESGRAVAFMMDDALLYGERAKAKNPADWIVVGKPQSREAYGCMIRKD 238 Query: 234 DTEWYNIVSWTHYAMVTAEELG-ITQKNINQ 263 D ++ + M+ + + K Q Sbjct: 239 DPQFKKVSDTVIAGMMKDGSINTLYTKWFMQ 269 >gi|239816902|ref|YP_002945812.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] gi|239803479|gb|ACS20546.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] Length = 297 Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats. Identities = 55/275 (20%), Positives = 107/275 (38%), Gaps = 10/275 (3%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE-VKANGDWKGFD 60 +K + +L + + + L IK+ G ++ G + F+ A GF Sbjct: 3 FKLSLAFGASIALLCGAAAAQESPTLRKIKETGTVQIGSRDTQIPFSYKTGAESAPIGFT 62 Query: 61 VDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 + C + AI +++Y LN+ R +Q+ +D+ T T+ R+ + Sbjct: 63 NEICLKVVDAIKAKLGLSKIEVRYTLLNSTNRIPLVQNGTVDLDCATTTNTVQRQQQVDF 122 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 A P + + K GI+S++ L G ++ AG+T+ L + K N++ I Sbjct: 123 A--PSHFVTNITAAVKKNSGINSIADLQGKTVATVAGSTSMQLLRGFRKTENIEVQEIAG 180 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + + R AY D L L +++ +L D++ + P + + D E Sbjct: 181 KDTADAFLLLASDRAAAYVLDDVQLAGLIANQPNAADYKLLKDVLRQEPYGIMMRKDDPE 240 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + IV M+ + G K + P Sbjct: 241 FKAIVDQAVTEMMKS---GSIDKLYAKWFMSPIPP 272 >gi|55823483|ref|YP_141924.1| amino acid (glutamine) ABC transporter substrate binding protein [Streptococcus thermophilus CNRZ1066] gi|116628268|ref|YP_820887.1| amino acid ABC transporter periplasmic protein [Streptococcus thermophilus LMD-9] gi|55739468|gb|AAV63109.1| amino acid (glutamine) ABC transporter substrate binding protein [Streptococcus thermophilus CNRZ1066] gi|116101545|gb|ABJ66691.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus thermophilus LMD-9] gi|312278892|gb|ADQ63549.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus thermophilus ND03] Length = 284 Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats. Identities = 59/276 (21%), Positives = 108/276 (39%), Gaps = 23/276 (8%) Query: 2 YKDFFVSILCLIILFFTSF---------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 K F + L ++ T+ + A + +IKK G L+ + F V Sbjct: 5 KKIFALLALVFALVAVTACSSNSSSGKSTAKARTIEEIKKSGELRIAVFADKKPFGYVDN 64 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G ++G+D++ L+ + P +Y+ ++A R L S ++DI N T R+ Sbjct: 65 KGAYQGYDIELGNRLAKDLGVKP---KYVSVDAANRAEFLISNKVDITLANFTVTDERKK 121 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + A G + K K I V +L G ++ V GTT E YF+ + Sbjct: 122 QVDFAL--PYMKVSIGVVSPKDKVIKDVKELEGKTLIVTKGTTAET----YFEKNYPNIK 175 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 +++ + A R DA++ D + + A L N V + + +APA+ + Sbjct: 176 LQKYDQYSDAYQALLDGRGDAFSTDNTEVLAWALENK--GYEVGITSLGDPDTIAPAVQK 233 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 G+ E + ++ E K+ + T Sbjct: 234 GNKELLDFINKDIK---KLGEENFFHKDYEKTLHPT 266 >gi|46579165|ref|YP_009973.1| amino acid ABC transporter amino acid-binding protein [Desulfovibrio vulgaris str. Hildenborough] gi|120603261|ref|YP_967661.1| extracellular solute-binding protein [Desulfovibrio vulgaris DP4] gi|46448578|gb|AAS95232.1| amino acid ABC transporter, amino acid-binding protein [Desulfovibrio vulgaris str. Hildenborough] gi|120563490|gb|ABM29234.1| amino acid ABC transporter substrate-binding protein, PAAT family [Desulfovibrio vulgaris DP4] gi|311233003|gb|ADP85857.1| extracellular solute-binding protein family 3 [Desulfovibrio vulgaris RCH1] Length = 275 Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats. Identities = 57/276 (20%), Positives = 111/276 (40%), Gaps = 14/276 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M +++ ++F S + ++ K ++ G+ T + G+W GFD Sbjct: 1 MRLGKIIALAAAFLVFTGSAALAGPAYDNVMKDKKIRVGLMTDSIPGGFYNEKGEWGGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D ++ + D ++Q +N K R +Q ++DI N T R+ S+ + Sbjct: 61 YDIATEIAKRMGVDIERVQ---VNNKTRIAYVQQGRVDISVSNMTHTRERDKSVDFSI-- 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH---NMKYHPIVFE 177 +FDGQ + K + SV + G I GTT+E+ + K N I F+ Sbjct: 116 TYFFDGQKVLAKKGQ-FKSVKDMVGKKIATMQGTTSEVNVKRALKEAGDPNPDQSVISFQ 174 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + E A + R ++ D S L + P + ++ + +++ P A+ Q D+ Sbjct: 175 KESECFQALQMGRVAGWSTDASILVGY--SAKEPGKFELVGNFLAEEPYGIAMPQDDSAL 232 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 + V+ M + G + N+ T ++ Sbjct: 233 RDAVNAALQDMW---KDGTYKTIYNKWYGPGTPFEM 265 >gi|254254170|ref|ZP_04947487.1| ABC-type amino acid transport/signal transduction systems periplasmic component [Burkholderia dolosa AUO158] gi|124898815|gb|EAY70658.1| ABC-type amino acid transport/signal transduction systems periplasmic component [Burkholderia dolosa AUO158] Length = 298 Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats. Identities = 52/277 (18%), Positives = 90/277 (32%), Gaps = 11/277 (3%) Query: 1 MYKDF--FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + F +L + L IK G + GI V F+ G Sbjct: 1 MNRRFRCLTVVLACALAGAAHAQALTGTLKKIKDTGVVSLGIRESSVPFSYSDNQQKNIG 60 Query: 59 FDVDFCRALSSAIF----DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + D + + ++ +P+ ++ R LQ+ ID +T TL R+ Sbjct: 61 YSRDIAARIIDQLKTELNVPSLTVKEIPITSQNRIPLLQNGTIDFECGSTTNTLERQKQA 120 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + Y G F K G+ L+G ++ AGT+ E L + M I Sbjct: 121 AFSNSIFLY--GIRFSTRKDSGVKDFPDLAGKTVATTAGTSDERLLRKLNEEKGMNMTII 178 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + E R A+ D LY + P + + + A + + D Sbjct: 179 SAKDHAEAFMNVTTGRAVAFVMDEPLLYGEIAKDRNPGAYTVTGTPLVHENYACMMRKDD 238 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + +V M T+ G +K ++ P Sbjct: 239 PAFKRVVDGVIAKMQTS---GDAEKLYDRWFTQPIPP 272 >gi|327192287|gb|EGE59252.1| extracellular solute-binding protein family 3 [Rhizobium etli CNPAF512] Length = 307 Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats. Identities = 62/276 (22%), Positives = 106/276 (38%), Gaps = 7/276 (2%) Query: 1 MYKDFFVSI--LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M F + L + L T + S L ++ RG L G + + A+ +G Sbjct: 29 MTISFRTGVMSLAVAALMSTPALADGSKLDEVLARGHLVLGTGSTNAPWHFKSADDKLQG 88 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD ++ A+F DP KI+Y+ ++ R + + ++DI + T R + +AF Sbjct: 89 FDVDMGHIIAKALFGDPEKIEYVNQSSDARIPNITTDKVDITCQFMTVTGER--AQQVAF 146 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y +G G ++ + + L A V + A + +E Sbjct: 147 TIPYYREGVGLMLKADGKYADYAALKAAGSSVTISVLQNVYAEAMVHAALPEATVDQYES 206 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 V+ I A + R DA D S+L P + + A A+ +GD +W Sbjct: 207 VDLIYQALESGRADAVATDQSSLAWYMTQ--NPGRYKDAGYGWNPQTYACAVKRGDQDWL 264 Query: 239 NIVSWTHYAMVTAEELGITQKNIN-QVSKDTTNPDV 273 N V+ + +T E K+ KD P + Sbjct: 265 NFVNTALHEAMTGVEFDFYAKSFKTWFGKDLAPPQI 300 >gi|224966982|dbj|BAH28861.1| ABC transporter protein [Lactobacillus mucosae] Length = 285 Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats. Identities = 66/270 (24%), Positives = 113/270 (41%), Gaps = 14/270 (5%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F ++ L + N S + IKKRG++K + L + V +G G+D+ Sbjct: 20 FLLAFAPLAGTVTAHAADNQSSVSAIKKRGYIKIAVFGDLPPYGWVNKDGKRVGYDLYLA 79 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 R ++ + K +++ +NA R L S + D++ N T R+ ++ A Sbjct: 80 RRIAKDLG---VKAKFVQVNANNRVDTLNSNKADLVLANFTVTSERKQTVDFA--KPYMK 134 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 G + K I+ VSQL G + V GTT E YF H + F+ + Sbjct: 135 VSVGVVSKKSDPITKVSQLKGQKLIVNKGTTAEQ----YFTQHQTGASLLKFDSKTQQFN 190 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 A + R A D S LYA P V + + S +APA+ +G+ ++++WT Sbjct: 191 ALKNGRAKALADDNSYLYAWVKN--NPKYTVGIKQLGKSSYIAPAVKKGN---KSLLNWT 245 Query: 245 HYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 + + +K+ NQ K +V+ Sbjct: 246 NKEITKLNGENFFEKDYNQELKPYFGSEVK 275 >gi|241113591|ref|YP_002973426.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240861799|gb|ACS59465.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 279 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 62/276 (22%), Positives = 107/276 (38%), Gaps = 7/276 (2%) Query: 1 MYKDFFVSI--LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M F + L + L T + S L ++ RG L G + + A+ +G Sbjct: 1 MTISFRTGVMSLAVAALLSTPALADGSKLDEVLARGHLVLGTGSTNAPWHFKSADDKLQG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD ++ A+F DP KI+Y+ ++ R + + ++DI + T R + +AF Sbjct: 61 FDVDMGHIIAKALFGDPEKIEYVNQSSDARIPNITTDKVDITCQFMTVTGER--AQQVAF 118 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y +G G ++ + + L A V + A + ++ Sbjct: 119 TIPYYREGVGLMLKADGKYADYAALKAAGSSVTISVLQNVYAEAMVHAALPEATVDQYDS 178 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 V+ I A + R DA D S+L P + + A A+ +GD +W Sbjct: 179 VDLIYQALESGRADAVATDQSSLAWYMTQ--NPGRYKDAGYGWNPQTYACAVKRGDQDWL 236 Query: 239 NIVSWTHYAMVTAEELGITQKNIN-QVSKDTTNPDV 273 N V+ + +T E K+ KD T P + Sbjct: 237 NFVNTALHEAMTGVEFDFYAKSFKTWFGKDLTPPQI 272 >gi|320334508|ref|YP_004171219.1| ABC transporter periplasmic subunit [Deinococcus maricopensis DSM 21211] gi|319755797|gb|ADV67554.1| ABC-type transporter, periplasmic subunit family 3 [Deinococcus maricopensis DSM 21211] Length = 278 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 60/254 (23%), Positives = 101/254 (39%), Gaps = 15/254 (5%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPSKIQYLPLN 84 I + G G+ F V +GD GFDVD + ++ + K++ + Sbjct: 22 DQICQDGKFTAGVKYDSPPFGFVNEDGDVGGFDVDLVKEIAKDLSAACKKTVKLELKQVT 81 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 +K R +Q+ +D+ + T R + + DGQ ++ I SV L+ Sbjct: 82 SKNRIEFVQNGTVDLAAATATATYGRMDVVDF--SNTYFIDGQRLLVPANSAIKSVKDLA 139 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G + G+T+E L KA K + F++ + A + R DA + D + L L Sbjct: 140 GKRVGTAQGSTSEANL----KAAAPKASVVSFQQYTDAFTALQQGRVDAVSTDSTILLGL 195 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 K + PS+ I+ S P + Q D++W N V+ + M G K + Sbjct: 196 KASAPDPSKFKIVGAYFSNEPYGIILKQNDSKWRNFVNESLTRMAA---DGTYAKIFRKW 252 Query: 265 SKDTTN---PDVQR 275 T PD +R Sbjct: 253 FGPNTKYNLPDPKR 266 >gi|167921349|ref|ZP_02508440.1| putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei BCC215] Length = 299 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 45/270 (16%), Positives = 91/270 (33%), Gaps = 9/270 (3%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + + + L I+ G + G+ V F+ G Sbjct: 2 MKPLRPLLSIAVGCALAAAAHADDAGPTLKKIRDTGVVTLGVRESSVPFSYYDQQQRTIG 61 Query: 59 FDVDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + + + I ++ ++ +P+ ++ R +Q+ +D+ +T T R + Sbjct: 62 YSQEIALKIVDEIKKTLNRPNLTVREIPITSQNRIPLVQNGTVDLECGSTTHTKERANQV 121 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + Y G I+ K G+ L+G ++ AGTT E L + M I Sbjct: 122 SFSNSIFQY--GMRLIVKKSSGVKDFPDLAGKTVATTAGTTEERLLRQWNAEKGMAMQII 179 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + ++ R A+ D LY K P ++VI + + + D Sbjct: 180 SAKDHADAFLNVKSGRAVAFFMDEPLLYGAKAKEANPGDYVITGNSPVSEAYGCMLRKDD 239 Query: 235 TEWYNIVSWTHYAMVTAEE-LGITQKNINQ 263 + + M + E + K N+ Sbjct: 240 PGFKQLADRVIARMQRSGEAEALYVKWFNR 269 >gi|126444823|ref|YP_001061310.1| solute-binding family 1 protein [Burkholderia pseudomallei 668] gi|126456775|ref|YP_001074257.1| solute-binding family 1 protein [Burkholderia pseudomallei 1106a] gi|167722081|ref|ZP_02405317.1| putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei DM98] gi|167826650|ref|ZP_02458121.1| putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 9] gi|167908550|ref|ZP_02495755.1| putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei NCTC 13177] gi|237509822|ref|ZP_04522537.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei MSHR346] gi|242313678|ref|ZP_04812695.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei 1106b] gi|254182839|ref|ZP_04889432.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei 1655] gi|126224314|gb|ABN87819.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei 668] gi|126230543|gb|ABN93956.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei 1106a] gi|184213373|gb|EDU10416.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei 1655] gi|235002027|gb|EEP51451.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei MSHR346] gi|242136917|gb|EES23320.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei 1106b] Length = 299 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 45/270 (16%), Positives = 91/270 (33%), Gaps = 9/270 (3%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + + + L I+ G + G+ V F+ G Sbjct: 2 MKPLRPLLSIAVGCALAAAAHADDAGPTLKKIRDTGVVTLGVRESSVPFSYYDQQQRTIG 61 Query: 59 FDVDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + + + I ++ ++ +P+ ++ R +Q+ +D+ +T T R + Sbjct: 62 YSQEIALKIVDEIKKTLNRPNLTVREIPITSQNRIPLVQNGTVDLECGSTTHTKERANQV 121 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + Y G I+ K G+ L+G ++ AGTT E L + M I Sbjct: 122 SFSNSIFQY--GMRLIVKKSSGVKDFPDLAGKTVATTAGTTEERLLRQWNAEKGMAMQII 179 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + ++ R A+ D LY K P ++VI + + + D Sbjct: 180 SAKDHADAFLNVKSGRAVAFFMDEPLLYGAKAKEANPGDYVITGNSPVSEAYGCMLRKDD 239 Query: 235 TEWYNIVSWTHYAMVTAEE-LGITQKNINQ 263 + + M + E + K N+ Sbjct: 240 PGFKQLADRVIARMQRSGEAEALYVKWFNR 269 >gi|53721189|ref|YP_110174.1| glutamate/aspartate periplasmic binding protein precursor [Burkholderia pseudomallei K96243] gi|76819782|ref|YP_336826.1| glutamate/aspartate periplasmic binding protein [Burkholderia pseudomallei 1710b] gi|124381383|ref|YP_001025039.1| putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia mallei NCTC 10229] gi|167818262|ref|ZP_02449942.1| putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 91] gi|167848169|ref|ZP_02473677.1| putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei B7210] gi|167896727|ref|ZP_02484129.1| putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 7894] gi|167913410|ref|ZP_02500501.1| putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 112] gi|52211603|emb|CAH37598.1| glutamate/aspartate periplasmic binding protein precursor [Burkholderia pseudomallei K96243] gi|76584255|gb|ABA53729.1| glutamate/aspartate periplasmic binding protein precursor [Burkholderia pseudomallei 1710b] Length = 299 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 45/270 (16%), Positives = 92/270 (34%), Gaps = 9/270 (3%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + + + + L I+ G + G+ V F+ G Sbjct: 2 MKPLRPLLSIAVGCALAAAAHANDAGPTLKKIRDTGVVTLGVRESSVPFSYYDQQQRTIG 61 Query: 59 FDVDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + + + I ++ ++ +P+ ++ R +Q+ +D+ +T T R + Sbjct: 62 YSQEIALKIVDEIKKTLNRPNLTVREIPITSQNRIPLVQNGTVDLECGSTTHTKERANQV 121 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + Y G I+ K G+ L+G ++ AGTT E L + M I Sbjct: 122 SFSNSIFQY--GMRLIVKKSSGVKDFPDLAGKTVATTAGTTEERLLRQWNAEKGMAMQII 179 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + ++ R A+ D LY K P ++VI + + + D Sbjct: 180 SAKDHADAFLNVKSGRAVAFFMDEPLLYGAKAKEANPGDYVITGNSPVSEAYGCMLRKDD 239 Query: 235 TEWYNIVSWTHYAMVTAEE-LGITQKNINQ 263 + + M + E + K N+ Sbjct: 240 PGFKQLADRVIARMQRSGEAEALYVKWFNR 269 >gi|51891628|ref|YP_074319.1| amino acid ABC transporter substrate-binding protein [Symbiobacterium thermophilum IAM 14863] gi|51855317|dbj|BAD39475.1| amino acid ABC transporter substrate-binding protein [Symbiobacterium thermophilum IAM 14863] Length = 275 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 62/231 (26%), Positives = 100/231 (43%), Gaps = 8/231 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + + I+ G L+ G+ + F A +G ++D R ++ IF D SK+Q+ + Sbjct: 42 AQVQKIRDAGVLRVGVKEDVPKFGYFDPAKNAHEGLEIDLARRIAKEIFGDESKVQFTGV 101 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 NAK R AL + +ID++ T R+ S + D GF++ GI S L Sbjct: 102 NAKTRGPALDNGEIDLVIATFTITEERKKSWNF--SDPYFTDYVGFLVLADSGIQSWKDL 159 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 G I V +T L + + +K + F EI AA + R DA++ D S L+ Sbjct: 160 DGKVIGVAQSASTRAALTEQAEKDGIKVEFMEFATYPEIKAALDSRRIDAFSVDQSILWG 219 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 K ++V+LPD + A +TE V+ M + EL Sbjct: 220 YK-----DDKNVMLPDKFAPQEYGIATKLSNTELAEFVNNILKGMKESGEL 265 >gi|319946728|ref|ZP_08020962.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus australis ATCC 700641] gi|319746776|gb|EFV99035.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus australis ATCC 700641] Length = 285 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 60/279 (21%), Positives = 114/279 (40%), Gaps = 22/279 (7%) Query: 5 FFVSILCLIILFFTSFSTN----------ASILGDIKKRGFLKCGINTGLVGFAEVKANG 54 + L +LF T+ ++ A + +IKK G L+ + F V +G Sbjct: 8 LVLFTFALALLFITACGSSKSSSSSTGSKARTIEEIKKSGELRIAVFGDKKPFGYVDNDG 67 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 ++G+D++ L+ + P +Y+ ++A R L S ++DI N T R+ + Sbjct: 68 SYQGYDIELGNQLAKDLGVKP---KYVSVDAANRAEYLISNKVDITLANFTVTDERKKQV 124 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 A G + K K I+ V QL G ++ V GTT E YF+ ++ + Sbjct: 125 DFAL--PYMKVSLGVVSPKDKVITDVKQLEGKTLIVTKGTTAET----YFEKNHPEVKLQ 178 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +++ + A R DA++ D + + A L N V + + +APA+ +G+ Sbjct: 179 KYDQYSDAYQALLDGRGDAFSTDNTEVLAWALENK--GYEVGITSLGDPDTIAPAVQKGN 236 Query: 235 TEWYNIVSWTHYAMVTAEEL-GITQKNINQVSKDTTNPD 272 E + ++ + +K ++ D D Sbjct: 237 KELLDFINDDIQKLGKENFFHKAYEKTLHPTYGDAAKAD 275 >gi|167564787|ref|ZP_02357703.1| putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia oklahomensis EO147] gi|167571954|ref|ZP_02364828.1| putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia oklahomensis C6786] Length = 299 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 46/270 (17%), Positives = 92/270 (34%), Gaps = 9/270 (3%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + + + + L I+ G + G+ V F+ G Sbjct: 2 MKPLRPLLSIAIGCALAAAAHADDASPTLKKIRDTGIVTLGVRESSVPFSYYDQQQRTIG 61 Query: 59 FDVDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + D + I + + ++ +P+ ++ R +Q+ +D+ +T T R + Sbjct: 62 YSQDIALKIVDEIKKELKRPNLTVREIPITSQNRIPLVQNGTVDLECGSTTHTKERANQV 121 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + Y G I+ K G+ L+G ++ AGTT E L + M I Sbjct: 122 SFSNSFFQY--GMRLIVKKSSGVKDFPDLAGKTVATTAGTTEERLLRQWNAEKGMSMQII 179 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + ++ R A+ D LY K P ++VI + + + D Sbjct: 180 SAKDHADAFLNVKSGRAVAFFMDEPLLYGAKAKEANPGDYVITGNSPVSETYGCMLRKDD 239 Query: 235 TEWYNIVSWTHYAMVTAEE-LGITQKNINQ 263 + + M + E + K N+ Sbjct: 240 AGFKQLADRVIAQMQRSGEAEALYVKWFNR 269 >gi|228477047|ref|ZP_04061685.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus salivarius SK126] gi|228251066|gb|EEK10237.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus salivarius SK126] Length = 284 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 58/276 (21%), Positives = 110/276 (39%), Gaps = 23/276 (8%) Query: 2 YKDFFVSILCLIILFFTSF---------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 K F + L ++ T+ + A + +IKK G L+ + F V Sbjct: 5 KKIFALLALVFALVAVTACSSNSSSGKSTAKARTIEEIKKSGELRIAVFADKKPFGYVDN 64 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G ++G+D++ L+ + P +Y+ ++A R L S ++DI N T R+ Sbjct: 65 KGAYQGYDIELGNRLAKDLGVKP---KYVSVDAANRAEFLISNKVDITLANFTVTDERKK 121 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + A G + K K I V +L G ++ V GTT E YF+ + Sbjct: 122 QVDFAL--PYMKVSIGVVSPKDKVIKDVKELEGKTLIVTKGTTAET----YFEKNYPNIK 175 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 +++ + A R DA++ D + + A L N V + + + +APA+ + Sbjct: 176 LQKYDQYSDAYQALLDGRGDAFSTDNTEVLAWALENK--GYEVGITSLGNPDTIAPAVQK 233 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 G+ E + ++ + K+ + + T Sbjct: 234 GNKELLDFINKDIK---KLGKENFFHKDYEKTLRPT 266 >gi|254195402|ref|ZP_04901830.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei S13] gi|254299631|ref|ZP_04967080.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei 406e] gi|157809634|gb|EDO86804.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei 406e] gi|169652149|gb|EDS84842.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei S13] Length = 298 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 45/270 (16%), Positives = 91/270 (33%), Gaps = 9/270 (3%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + + + L I+ G + G+ V F+ G Sbjct: 1 MKPLRPLLSIAVGCALAAAAHADDAGPTLKKIRDTGVVTLGVRESSVPFSYYDQQQRTIG 60 Query: 59 FDVDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + + + I ++ ++ +P+ ++ R +Q+ +D+ +T T R + Sbjct: 61 YSQEIALKIVDEIKKTLNRPNLTVREIPITSQNRIPLVQNGTVDLECGSTTHTKERANQV 120 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + Y G I+ K G+ L+G ++ AGTT E L + M I Sbjct: 121 SFSNSIFQY--GMRLIVKKSSGVKDFPDLAGKTVATTAGTTEERLLRQWNAEKGMAMQII 178 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + ++ R A+ D LY K P ++VI + + + D Sbjct: 179 SAKDHADAFLNVKSGRAVAFFMDEPLLYGAKAKEANPGDYVITGNSPVSEAYGCMLRKDD 238 Query: 235 TEWYNIVSWTHYAMVTAEE-LGITQKNINQ 263 + + M + E + K N+ Sbjct: 239 PGFKQLADRVIARMQRSGEAEALYVKWFNR 268 >gi|53715943|ref|YP_106460.1| putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia mallei ATCC 23344] gi|121597649|ref|YP_990548.1| putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia mallei SAVP1] gi|52421913|gb|AAU45483.1| putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia mallei ATCC 23344] gi|121225447|gb|ABM48978.1| putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia mallei SAVP1] Length = 298 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 45/270 (16%), Positives = 92/270 (34%), Gaps = 9/270 (3%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + + + + L I+ G + G+ V F+ G Sbjct: 1 MKPLRPLLSIAVGCALAAAAHANDAGPTLKKIRDTGVVTLGVRESSVPFSYYDQQQRTIG 60 Query: 59 FDVDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + + + I ++ ++ +P+ ++ R +Q+ +D+ +T T R + Sbjct: 61 YSQEIALKIVDEIKKTLNRPNLTVREIPITSQNRIPLVQNGTVDLECGSTTHTKERANQV 120 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + Y G I+ K G+ L+G ++ AGTT E L + M I Sbjct: 121 SFSNSIFQY--GMRLIVKKSSGVKDFPDLAGKTVATTAGTTEERLLRQWNAEKGMAMQII 178 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + ++ R A+ D LY K P ++VI + + + D Sbjct: 179 SAKDHADAFLNVKSGRAVAFFMDEPLLYGAKAKEANPGDYVITGNSPVSEAYGCMLRKDD 238 Query: 235 TEWYNIVSWTHYAMVTAEE-LGITQKNINQ 263 + + M + E + K N+ Sbjct: 239 PGFKQLADRVIARMQRSGEAEALYVKWFNR 268 >gi|330432864|gb|AEC17923.1| cystine transporter subunit [Gallibacterium anatis UMN179] Length = 280 Score = 200 bits (508), Expect = 4e-49, Method: Composition-based stats. Identities = 57/278 (20%), Positives = 112/278 (40%), Gaps = 18/278 (6%) Query: 1 MY--KDFFVSILCL-IILFFTS------FSTNASILGDIKKRGFLKCGINTGLVGFAEVK 51 M K ++ + L T+ S L I++ G ++ G+ + F V Sbjct: 1 MKFAKKLTAALFATTLALGLTACDDNDKADGAKSQLAQIQEAGKVRIGVFSDKPPFGYVD 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G +GFDV+ + ++ + D +K +++ + A R L S ++DI+ N T R+ Sbjct: 61 GQGKSQGFDVEIGKEIAKDLVGDENKAEFVLVEAANRAEYLLSNKVDIILANFTVTPARK 120 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 + A G + + I+ + QL+ ++ V GTT + +F + Sbjct: 121 EVVDFAN--PYMKVALGVVSKEGSVITDIQQLTDKTLLVNKGTTADA----FFTKNYPNI 174 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + FE+ E A + R DA D + L+A P V + + + +APA+ Sbjct: 175 KLLKFEQNTETFDALKDGRGDALAHDNTLLFAWAKN--NPGYTVGVRSLGEQEFIAPAVQ 232 Query: 232 QGDTEWYNIVSWTHYAMVTAEELG-ITQKNINQVSKDT 268 + E ++ + ++ +K ++ V DT Sbjct: 233 KNQPELLKWLNDEIVKLTKEGKIKAAYEKTLHPVYGDT 270 >gi|206978156|ref|ZP_03239038.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus H3081.97] gi|206743628|gb|EDZ55053.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus H3081.97] Length = 276 Score = 200 bits (508), Expect = 4e-49, Method: Composition-based stats. Identities = 59/278 (21%), Positives = 106/278 (38%), Gaps = 24/278 (8%) Query: 1 MYKDFFVSIL-CLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + + CL +L + + IKKRG L G+ F Sbjct: 4 MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + + + GQ ++ K I S+ + G + G+T+ + Sbjct: 124 EERKKEVDF--SDVYFKAGQSLLVKKGSNIKSIDDVKKGVKVLAVKGSTSTNNIRQKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQ 263 A+ +G + ++ M + E + +K I Q Sbjct: 235 GIAVQKGADDLTKEINSLIKDMKASGEYDKLYEKWIGQ 272 >gi|229083877|ref|ZP_04216186.1| hypothetical protein bcere0022_5340 [Bacillus cereus Rock3-44] gi|228699455|gb|EEL52131.1| hypothetical protein bcere0022_5340 [Bacillus cereus Rock3-44] Length = 276 Score = 199 bits (507), Expect = 4e-49, Method: Composition-based stats. Identities = 60/278 (21%), Positives = 106/278 (38%), Gaps = 24/278 (8%) Query: 1 MYKDF-FVSILCLIILFFTSF-----------STNASILGDIKKRGFLKCGINTGLVGFA 48 M K F F+ CL L + ++ IKKRG L G+ F Sbjct: 4 MKKLFTFIVFACLFTLVVAGCGNKKEEAKETNTKQGGVVEQIKKRGKLVVGVKHDTNLFG 63 Query: 49 EVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D SK++ + +K R L++ ID + T Sbjct: 64 LKNPSTGKVEGFDVDIAKALAKKILGDESKLELKEVTSKTRIPMLKNGDIDTIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + + + GQ ++ K I S+ + + G+T+ + Sbjct: 124 EERKKEVDF--SDVYFKAGQSLLVKKGSNIKSIDDVKKDVKVLAVKGSTSTNNIRQKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDAN---YQVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQ 263 A+ +G T+ ++ M E + +K I + Sbjct: 235 GIAVQKGATDLTKEINDLLKEMKANGEYDKLYEKWIGE 272 >gi|30018825|ref|NP_830456.1| glutamine-binding protein [Bacillus cereus ATCC 14579] gi|229126071|ref|ZP_04255093.1| hypothetical protein bcere0015_5340 [Bacillus cereus BDRD-Cer4] gi|29894367|gb|AAP07657.1| Glutamine-binding protein [Bacillus cereus ATCC 14579] gi|228657393|gb|EEL13209.1| hypothetical protein bcere0015_5340 [Bacillus cereus BDRD-Cer4] Length = 276 Score = 199 bits (507), Expect = 4e-49, Method: Composition-based stats. Identities = 59/281 (20%), Positives = 106/281 (37%), Gaps = 24/281 (8%) Query: 1 MYKDFFVSIL-CLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + + CL +L + + IKKRG L G+ F Sbjct: 4 MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + + + GQ ++ K I S+ + G + G+T+ + Sbjct: 124 EERKKEVDF--SDVYFKAGQSLLVKKGSEIKSIDDVKKGVKVLAVKGSTSTNNIRQKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSK 266 A+ +G + ++ M E + +K I Q + Sbjct: 235 GIAVQKGADDLTKEINSLLKDMKENGEYDKLYEKWIGQKQE 275 >gi|228983841|ref|ZP_04144036.1| hypothetical protein bthur0001_5580 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228775890|gb|EEM24261.1| hypothetical protein bthur0001_5580 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 276 Score = 199 bits (507), Expect = 4e-49, Method: Composition-based stats. Identities = 60/281 (21%), Positives = 107/281 (38%), Gaps = 24/281 (8%) Query: 1 MYKDFFVSIL-CLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + + CL +L T + + IKKRG L G+ F Sbjct: 4 MKKLFTLIVFSCLFVLVVTGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + + + GQ ++ K I S+ + G + G+T+ + Sbjct: 124 EERKKEVDF--SDVYFKAGQSLLVKKGSQIKSIDDVKKGVKVLAVKGSTSTNNIRQKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSK 266 A+ +G + ++ M E + +K I Q + Sbjct: 235 GIAVQKGADDLTKEINSLLKDMKANGEYDKLYEKWIGQKQE 275 >gi|330430558|gb|AEC21892.1| family 3 extracellular solute-binding protein [Pusillimonas sp. T7-7] Length = 308 Score = 199 bits (507), Expect = 4e-49, Method: Composition-based stats. Identities = 58/287 (20%), Positives = 98/287 (34%), Gaps = 21/287 (7%) Query: 1 MYKDF-------FVSILCLIILFFTSFSTNA-----SILGDIKKRGFLKCGINTGLVGFA 48 M K+F ++L IL F S S + L IK G + G + F+ Sbjct: 1 MLKNFSKKGATLRSALLAAGILAFASTSLASTPELTGTLKKIKDEGVVVLGYREASIPFS 60 Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNT 104 G+ +D+ + I D KI+ LP+ ++ R LQ+ D T Sbjct: 61 YYDDAKQPIGYSIDYTNLILERIKQDLDLPQLKIRKLPITSQNRISLLQNGTFDFECTTT 120 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164 RE + + + G ++ K GI+ L ++ V AGTT+E+ L Sbjct: 121 THNASREKQVDFSNS--LFVIGTRLLVKKDSGINDFDDLKDTNVVVGAGTTSEILLRKLN 178 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 + I + E R A D + L + P ++VI S Sbjct: 179 VDKKLGMRIISAKDHSESFLTLSTGRAKAMMMDDALLAGERAKTKDPKDYVITGTPQSFE 238 Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 I + DT+ ++ A++ G + + P Sbjct: 239 VYGCMIRKDDTQMKALIDDVI---AKAQQSGAAEAIYKKWFMSPIPP 282 >gi|331700617|ref|YP_004397576.1| ABC transporter periplasmic subunit [Lactobacillus buchneri NRRL B-30929] gi|329127960|gb|AEB72513.1| ABC-type transporter, periplasmic subunit family 3 [Lactobacillus buchneri NRRL B-30929] Length = 284 Score = 199 bits (507), Expect = 4e-49, Method: Composition-based stats. Identities = 68/289 (23%), Positives = 117/289 (40%), Gaps = 29/289 (10%) Query: 1 MYKDFF------VSILCLIILFFTSFSTNASI---------LGDIKKRGFLKCGINTGLV 45 M K F VS+ ++L T + + IKK G ++ + L Sbjct: 1 MKKRSFTRIIAVVSVFAALLLVLTGCGNSKKSSSQSNNPSSVQQIKKNGTIRIAVFGDLP 60 Query: 46 GFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105 + V +G G+DV ++ + K++++ +NA R AL S ++D++ N Sbjct: 61 PYGWVNKDGKRVGYDVTLAHQVAKDLG---VKVKFVQVNANNRVDALNSNKVDLVLANFT 117 Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165 T R+ + A G + K K I+ SQL G ++ V GTT E +YF Sbjct: 118 VTPERKQVIDFA--KPYMKVSVGVVSPKNKAITKASQLKGKNVIVTKGTTAE----NYFT 171 Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225 + + F+ + A + R A D S LYA + D P+ V + I KS Sbjct: 172 SKQPDVKLLKFDSKTQQFNALKNGRGVALADDNSYLYAW--SKDNPNYTVGIKSIGPKSY 229 Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 +APA+ +G+ + W + + + K+ N K +V+ Sbjct: 230 IAPAVKKGNKSLLD---WNNKEINKLTKESFFVKDYNTQLKPYFGKEVK 275 >gi|270292247|ref|ZP_06198461.1| CjaA protein [Streptococcus sp. M143] gi|270279293|gb|EFA25136.1| CjaA protein [Streptococcus sp. M143] Length = 288 Score = 199 bits (507), Expect = 4e-49, Method: Composition-based stats. Identities = 59/282 (20%), Positives = 113/282 (40%), Gaps = 25/282 (8%) Query: 5 FFVSILCLIILFFTS-------------FSTNASILGDIKKRGFLKCGINTGLVGFAEVK 51 V L ++F T+ + A + +IKK G L+ + F V Sbjct: 8 LTVFALAFALIFVTACSSGGSSDASSGKATAKARTIDEIKKSGELRIAVFGDKKPFGYVD 67 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 +G ++G+D++ L+ + K++Y+ ++A R L S ++DI N T R+ Sbjct: 68 NDGSYQGYDIELGNQLAQDLG---VKVKYVSVDAANRAEYLISNKVDITLANFTVTDERK 124 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 + A G + K K I V +L G ++ V GTT E YF+ ++ + Sbjct: 125 KQVDFAL--PYMKVSLGVVSPKDKVIKDVKELEGKTLIVTKGTTAET----YFEKNHPEV 178 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 +++ + A R DA++ D + + A L N V + + +APA+ Sbjct: 179 KLQKYDQYSDAYQALLDGRGDAFSTDNTEVLAWALENK--GYEVGITSLGDPDTIAPAVQ 236 Query: 232 QGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSKDTTNPD 272 +G+ E + ++ + +K ++ D D Sbjct: 237 KGNQELLDFINKDIEKLGKENFFHKAYEKTLHPTYGDAAKAD 278 >gi|293365028|ref|ZP_06611745.1| ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus oralis ATCC 35037] gi|307702261|ref|ZP_07639221.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus oralis ATCC 35037] gi|291316478|gb|EFE56914.1| ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus oralis ATCC 35037] gi|307624274|gb|EFO03251.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus oralis ATCC 35037] Length = 288 Score = 199 bits (507), Expect = 5e-49, Method: Composition-based stats. Identities = 58/286 (20%), Positives = 114/286 (39%), Gaps = 25/286 (8%) Query: 1 MYKDFFVSILCLIILFFTSF-------------STNASILGDIKKRGFLKCGINTGLVGF 47 + V L ++F T+ + A + +IKK G L+ + F Sbjct: 4 LKPILTVFALAFALIFVTACSSGGSSDASSGKKTAKARTIDEIKKSGELRIAVFGDKKPF 63 Query: 48 AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + +G ++G+D++ L+ + K++Y+ ++A R L S ++DI N T Sbjct: 64 GYIDNDGSYQGYDIELGNQLAQDLG---VKVKYVSVDAANRAEYLISNKVDITLANFTVT 120 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 R+ + A G + K K I V +L G ++ V GTT E YF+ + Sbjct: 121 DERKKQVDFAL--PYMKVSLGVVSPKDKVIKDVKELEGKTLIVTKGTTAET----YFEKN 174 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 + + +++ + A R DA++ D + + A L N V + + +A Sbjct: 175 HPEVKLQKYDQYSDAYQALLDGRGDAFSTDNTEVLAWALENK--GFEVGISSLGDPDTIA 232 Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSKDTTNPD 272 PA+ +G+ E + ++ + +K ++ D D Sbjct: 233 PAVQKGNQELLDYINQEIEKLGKENFFHKAYEKTLHPTYGDAAKAD 278 >gi|229154342|ref|ZP_04282462.1| hypothetical protein bcere0010_5420 [Bacillus cereus ATCC 4342] gi|228629166|gb|EEK85873.1| hypothetical protein bcere0010_5420 [Bacillus cereus ATCC 4342] Length = 273 Score = 199 bits (507), Expect = 5e-49, Method: Composition-based stats. Identities = 60/281 (21%), Positives = 107/281 (38%), Gaps = 24/281 (8%) Query: 1 MYKDFFVSIL-CLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + + CL +L T + + IKKRG L G+ F Sbjct: 1 MKKLFTLIVFSCLFVLVVTGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 60 Query: 49 EVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 61 LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 120 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + + + GQ ++ K I S+ + G + G+T+ + Sbjct: 121 EERKKEVDF--SDVYFKAGQSLLVKKGSQIKSIDDVKKGVKVLAVKGSTSTNNIRQKSPE 178 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 179 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 231 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSK 266 A+ +G + ++ M E + +K I Q + Sbjct: 232 GIAVQKGADDLTKEINSLLKDMKANGEYDKLYEKWIGQKQE 272 >gi|251790533|ref|YP_003005254.1| extracellular solute-binding protein family 3 [Dickeya zeae Ech1591] gi|247539154|gb|ACT07775.1| extracellular solute-binding protein family 3 [Dickeya zeae Ech1591] Length = 297 Score = 199 bits (507), Expect = 5e-49, Method: Composition-based stats. Identities = 48/262 (18%), Positives = 96/262 (36%), Gaps = 13/262 (4%) Query: 18 TSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 T +A L +K G + G V F+ G+ + + A+ Sbjct: 16 TGSLAHAEELTGTLKKVKDNGVIVIGHRESSVPFSYYDNQQKVVGYSQAYSDKIVEAVRK 75 Query: 74 DPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 +++ +P+ ++ R LQ+ D+ +T L R+ + + G Sbjct: 76 KLDAPNLQVKLIPITSQNRIPLLQNGTYDLECGSTTNNLERQQQVAF--SDTIFIIGTRL 133 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 + K G+ S+L+G ++ V +GTT+E+ L + + I + + + Sbjct: 134 LTKKDSGLKDFSELTGKAVVVTSGTTSEVLLNKMNEEKKLNLRIISAKDHGDSFRTLESG 193 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 R A+ D + L + P E VI S+ + + D ++ +V T + Sbjct: 194 RAVAFMMDDALLAGERAKAKTPDEWVITGTPQSREAYGCMLRKDDPQFKQLVDATISQLQ 253 Query: 250 TAEELGITQKNINQVSKDTTNP 271 T+ E +K + K P Sbjct: 254 TSGE---AEKWFDTWFKQPIPP 272 >gi|187920635|ref|YP_001889667.1| family 3 extracellular solute-binding protein [Burkholderia phytofirmans PsJN] gi|187719073|gb|ACD20296.1| extracellular solute-binding protein family 3 [Burkholderia phytofirmans PsJN] Length = 291 Score = 199 bits (507), Expect = 5e-49, Method: Composition-based stats. Identities = 50/269 (18%), Positives = 92/269 (34%), Gaps = 11/269 (4%) Query: 9 ILCLIILFFTSFSTN--ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 L + TS S S L I+ + G V F+ V N GF D C Sbjct: 2 ALATFAVVSTSASAQETQSTLAKIRSGNSISIGHRETSVPFSYVDTNNQVIGFSQDICNR 61 Query: 67 LSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + A+ ++++P+ ++ R +Q+ +D+ T R+ + Sbjct: 62 IIDAVKAKTGHPDLHVRFIPVTSQNRIPLVQNGTVDLECGVTTNLTSRQNQVAF--SDTF 119 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 + + K GI + L+G ++ GTT+E L + M I + E Sbjct: 120 FVATTRLLTRKDSGIKDFTDLAGKTVVTNQGTTSERLLRKMNEEKKMNMQIISAKDYGEG 179 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 R AY D L + +P++ VI+ S + + D E+ +V Sbjct: 180 RVTLETGRAVAYMMDDVLLAGARSLTAKPADWVIVGAPQSSEAYGFMLRKDDPEFKRLVD 239 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNP 271 ++ E+ ++ P Sbjct: 240 DAMVRVMKGSEIKTL---YDKWFLKPVPP 265 >gi|328554362|gb|AEB24854.1| glutamine ABC transporter (glutamine-binding lipoprotein) [Bacillus amyloliquefaciens TA208] gi|328912766|gb|AEB64362.1| glutamine ABC transporter (glutamine-binding lipoprotein) [Bacillus amyloliquefaciens LL3] Length = 275 Score = 199 bits (507), Expect = 5e-49, Method: Composition-based stats. Identities = 57/269 (21%), Positives = 107/269 (39%), Gaps = 20/269 (7%) Query: 6 FVSILCLIILFFTSFSTNA--------SILGDIKKRGFLKCGINTGLVGFAEVK-ANGDW 56 +S+L + +L A L IK R + G+ T F ++GD Sbjct: 12 LISLLAVFMLAACGGKETAGDSKGTGKDTLASIKDRDKIIFGVKTDTRLFGLKNPSSGDI 71 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +GFD+D + ++ I D K ++ + +K R LQ+ ID ++ T R+ + Sbjct: 72 EGFDIDIAKQIAKDILGDEKKAEFKEVTSKTRIPMLQNGDIDAITATMTITDERKKEVDF 131 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + + GQ ++ K I S L G+ + G+T+ + + + + Sbjct: 132 --SDVYFEAGQSLLVKKGSSIKSTEDLKKGSKVLAVKGSTSSQNIREKAPDAS----VLE 185 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 FE E A +A + DA T D + LY + N ++ + + P A+ +G + Sbjct: 186 FENYAEAFTALKAGQGDALTTDNAILYGMADENK---QYQLTGGTFTDEPYGIAVKKGQS 242 Query: 236 EWYNIVSWTHYAMVTAEELG-ITQKNINQ 263 ++ + M G I +K I + Sbjct: 243 GLVKEINASLKKMKADGRYGKIYKKWIKE 271 >gi|116248747|ref|YP_764588.1| putative substrate-binding component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115253397|emb|CAK11785.1| putative substrate-binding component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 279 Score = 199 bits (507), Expect = 5e-49, Method: Composition-based stats. Identities = 61/276 (22%), Positives = 105/276 (38%), Gaps = 7/276 (2%) Query: 1 MYKDFFVSI--LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M F + L + L T S L ++ RG L G + + A+ +G Sbjct: 1 MTISFRTGVMSLAVAALLSTPALAEGSKLDEVLARGHLVLGTGSTNAPWHFKSADDKLQG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD ++ A+F DP KI+Y+ ++ R + + ++DI + T R + +AF Sbjct: 61 FDVDMGHIIAKALFGDPEKIEYVNQSSDARIPNITTDKVDITCQFMTVTGER--AQQVAF 118 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y +G G ++ + + L A V + A + ++ Sbjct: 119 TIPYYREGVGLMLKADGKYADYAALKAAGSSVTISVLQNVYAEAMVHAALPEATVDQYDS 178 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 V+ I A + R DA D S+L P + + A A+ +GD +W Sbjct: 179 VDLIYQALESGRADAVATDQSSLAWYMTQ--NPGRYKDAGYGWNPQTYACAVKRGDQDWL 236 Query: 239 NIVSWTHYAMVTAEELGITQKNIN-QVSKDTTNPDV 273 N V+ + +T E K+ KD P + Sbjct: 237 NFVNTALHEAMTGVEFDFYAKSFKTWFGKDLAPPQI 272 >gi|311103230|ref|YP_003976083.1| glutamate/aspartate periplasmic-binding protein 1 [Achromobacter xylosoxidans A8] gi|310757919|gb|ADP13368.1| glutamate/aspartate periplasmic-binding protein 1 [Achromobacter xylosoxidans A8] Length = 295 Score = 199 bits (507), Expect = 5e-49, Method: Composition-based stats. Identities = 50/270 (18%), Positives = 103/270 (38%), Gaps = 10/270 (3%) Query: 4 DFFVSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 L ++L + + S L IK +G + G + F+ + G+ Sbjct: 10 RVLRGALGAVLLAGSVAAMAQSTDPILERIKAKGTITLGYRESSIPFSYLDDARKPVGYA 69 Query: 61 VDFCRALSSA----IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +D C + A + K+ Y+ +N + R + + +D+ +T +L R+ + Sbjct: 70 MDLCMKVVDAVRQRLQMPALKVDYIAVNPQNRIALVANGTVDLECGSTVNSLGRQAQVDF 129 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + ++ K I V L+G ++ + TT E + +A N++ + Sbjct: 130 --SAPHFISTTRLLVRKGADIKEVEDLNGKAVALPINTTPERLIKALIEAKNLQVRIVPV 187 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E A R DA++ D LY L+ + P + ++ +S P + + T Sbjct: 188 RDNSEGFLALSTGRADAFSTDDILLYGLRKSAPTPVDFEVVGRPLSFDPYGLMLQKNSTV 247 Query: 237 WYNIVSWTHYAMVTAEELGI-TQKNINQVS 265 + ++V+ T V + EL K + Sbjct: 248 FLSLVNATIARSVRSGELNASYDKWFAPMG 277 >gi|315612794|ref|ZP_07887705.1| ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis ATCC 49296] gi|315314904|gb|EFU62945.1| ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis ATCC 49296] Length = 288 Score = 199 bits (507), Expect = 5e-49, Method: Composition-based stats. Identities = 59/282 (20%), Positives = 113/282 (40%), Gaps = 25/282 (8%) Query: 5 FFVSILCLIILFFTS-------------FSTNASILGDIKKRGFLKCGINTGLVGFAEVK 51 V L ++F T+ + A + +IKK G L+ + F V Sbjct: 8 LTVFALAFTLIFVTACSSSGSSDASSGKTTAKARTIDEIKKSGELRIAVFGDKKPFGYVD 67 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 +G ++G+D++ L+ + K++Y+ ++A R L S ++DI N T R+ Sbjct: 68 NDGSYQGYDIELGNQLAQDLG---VKVKYVSVDAANRAEYLISNKVDITLANFTVTDERK 124 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 + A G + K K I V +L G ++ V GTT E YF+ ++ + Sbjct: 125 KQVDFAL--PYMKVSLGVVSPKDKVIKDVKELEGKTLIVTKGTTAET----YFEKNHPEV 178 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 +++ + A R DA++ D + + A L N V + + +APA+ Sbjct: 179 KLQKYDQYSDAYQALLDGRGDAFSTDNTEVLAWALENK--GYEVGISSLGDPDTIAPAVQ 236 Query: 232 QGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSKDTTNPD 272 +G+ E + ++ + +K ++ D D Sbjct: 237 KGNQELLDYINQEIEKLGKENFFHKAYEKTLHPTYGDAAKAD 278 >gi|218460738|ref|ZP_03500829.1| putative substrate-binding component of ABC transporter [Rhizobium etli Kim 5] Length = 279 Score = 199 bits (507), Expect = 5e-49, Method: Composition-based stats. Identities = 65/276 (23%), Positives = 107/276 (38%), Gaps = 7/276 (2%) Query: 1 MYKDFFVSI--LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M F + L + L T S L ++ RG L G + + A+ +G Sbjct: 1 MTISFRAGVISLVAVALLSTPVLAEGSKLDEVLARGHLVLGTGSTNAPWHFKSADDKLQG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD R ++ A+F DP KI+Y+ ++ R + + ++DI + T R + +AF Sbjct: 61 FDVDMGRIIAKALFGDPEKIEYVNQSSDARIPNITTDKVDITCQFMTVTGER--AQQVAF 118 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y +G G ++ S + L A V + A + +E Sbjct: 119 TIPYYREGVGLMLKADGKYSDYAALKTAGSSVTISVLQNVYAEAMVHAALPEATVDQYES 178 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 V+ I A + R DA D S+L P + + A A+ +GD +W Sbjct: 179 VDLIYQALESGRADAAATDQSSLAWYMTQ--NPGRYKDAGYGWNPQTYACAVKRGDQDWL 236 Query: 239 NIVSWTHYAMVTAEELGITQKNIN-QVSKDTTNPDV 273 N V+ + +T E K+ KD T P + Sbjct: 237 NFVNTALHEAMTGVEFDFYAKSFKTWFGKDLTPPQI 272 >gi|47568091|ref|ZP_00238796.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus G9241] gi|218232444|ref|YP_002365436.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus B4264] gi|229148978|ref|ZP_04277223.1| hypothetical protein bcere0011_5470 [Bacillus cereus m1550] gi|47555245|gb|EAL13591.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus G9241] gi|218160401|gb|ACK60393.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus B4264] gi|228634518|gb|EEK91102.1| hypothetical protein bcere0011_5470 [Bacillus cereus m1550] Length = 276 Score = 199 bits (506), Expect = 5e-49, Method: Composition-based stats. Identities = 59/281 (20%), Positives = 106/281 (37%), Gaps = 24/281 (8%) Query: 1 MYKDFFVSIL-CLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + + CL +L + + IKKRG L G+ F Sbjct: 4 MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + + + GQ ++ K I S+ + G + G+T+ + Sbjct: 124 EERKKEVDF--SDVYFKAGQSLLVKKGSNIKSIDDVKKGVKVLAVKGSTSTNNIRQKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSK 266 A+ +G + ++ M E + +K I Q + Sbjct: 235 GIAVQKGADDLTKEINSLLKDMKANGEYDKLYEKWIGQKQE 275 >gi|229015970|ref|ZP_04172931.1| hypothetical protein bcere0030_5530 [Bacillus cereus AH1273] gi|228745330|gb|EEL95371.1| hypothetical protein bcere0030_5530 [Bacillus cereus AH1273] Length = 276 Score = 199 bits (506), Expect = 5e-49, Method: Composition-based stats. Identities = 59/281 (20%), Positives = 109/281 (38%), Gaps = 24/281 (8%) Query: 1 MYKDFFVSIL-CLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + + CL +L + + IKKRG L G+ F Sbjct: 4 MKKLFTLIVFSCLFVLVVAGCGSKKDETKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDIAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + + + GQ ++ K I S+ + G + G+T+ + + Sbjct: 124 EERKKEVDF--SDVYFKAGQSLLVKKGSDIKSIDDVKKGVKVLAVKGSTSTNNI----RQ 177 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 178 KSPESTVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSK 266 A+ +G + ++ M E + +K I Q + Sbjct: 235 GIAVQKGADDLTKEINSLLKDMKANGEYDKLYEKWIGQKQE 275 >gi|217423103|ref|ZP_03454605.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei 576] gi|217394011|gb|EEC34031.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei 576] Length = 292 Score = 199 bits (506), Expect = 5e-49, Method: Composition-based stats. Identities = 44/245 (17%), Positives = 87/245 (35%), Gaps = 7/245 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQ 79 L I+ G + G+ V F+ G+ + + I ++ ++ Sbjct: 20 GPTLKKIRDTGVVTLGVRESSVPFSYYDQQQRTIGYSQEIALKIVDEIKKTLNRPNLTVR 79 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R +Q+ +D+ +T T R + + Y G I+ K G+ Sbjct: 80 EIPITSQNRIPLVQNGTVDLECGSTTHTKERANQVSFSNSIFQY--GMRLIVKKSSGVKD 137 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L+G ++ AGTT E L + M I + + ++ R A+ D Sbjct: 138 FPDLAGKTVATTAGTTEERLLRQWNAEKGMAMQIISAKDHADAFLNVKSGRAVAFFMDEP 197 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE-LGITQ 258 LY K P ++VI + + + D + + M + E + Sbjct: 198 LLYGAKAKEANPGDYVITGNSPVSEAYGCMLRKDDPGFKQLADRVIARMQRSGEAEALYV 257 Query: 259 KNINQ 263 K N+ Sbjct: 258 KWFNR 262 >gi|67643524|ref|ZP_00442269.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia mallei GB8 horse 4] gi|166998513|ref|ZP_02264371.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia mallei PRL-20] gi|167847286|ref|ZP_02472794.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei B7210] gi|254178914|ref|ZP_04885568.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein, truncation [Burkholderia mallei ATCC 10399] gi|254202701|ref|ZP_04909064.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia mallei FMH] gi|254208041|ref|ZP_04914391.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia mallei JHU] gi|147746948|gb|EDK54025.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia mallei FMH] gi|147751935|gb|EDK59002.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia mallei JHU] gi|160694828|gb|EDP84836.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein, truncation [Burkholderia mallei ATCC 10399] gi|238524887|gb|EEP88317.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia mallei GB8 horse 4] gi|243065198|gb|EES47384.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia mallei PRL-20] Length = 262 Score = 199 bits (506), Expect = 5e-49, Method: Composition-based stats. Identities = 47/240 (19%), Positives = 91/240 (37%), Gaps = 9/240 (3%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS----KIQYLPLNAKERFLA 91 + G + F+ N G+ DF + A+ + +++ +P+ ++ R Sbjct: 2 IALGHRESSIPFSYYDQNQQVVGYSRDFQMKVVDAVKKKLNLPNLQVKNIPVTSQNRIPL 61 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151 +Q+ +DI +T L R+ + G + K GI + L G ++ Sbjct: 62 VQNGTVDIECGSTTNNLDRQKQAAF--SDTIFVIGTRLMTKKDSGIKDFADLKGKTVVTT 119 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 AGTT+E L + + M I + E R A+ D + L + +P Sbjct: 120 AGTTSERLLREMNNKNQMGMSIISAKDHGESFQTLETGRAVAFMMDDALLAGERAKAKQP 179 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 E VI+ S+ + + D + +V A+V E+ G K ++ ++ P Sbjct: 180 GEWVIVGKPQSQEAYGCMMRKDDPAFKKVVDD---AIVQVEKSGEAAKIYSKWFENPIPP 236 >gi|308174443|ref|YP_003921148.1| glutamine ABC transporter glutamine-binding lipoprotein [Bacillus amyloliquefaciens DSM 7] gi|307607307|emb|CBI43678.1| glutamine ABC transporter (glutamine-binding lipoprotein) [Bacillus amyloliquefaciens DSM 7] Length = 275 Score = 199 bits (506), Expect = 5e-49, Method: Composition-based stats. Identities = 58/269 (21%), Positives = 108/269 (40%), Gaps = 20/269 (7%) Query: 6 FVSILCLIILFFT--------SFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDW 56 +S+L + +L S T L IK R + G+ T F ++GD Sbjct: 12 LISLLAVFMLAACGGKETSGDSKGTGKDTLASIKDRDKIIFGVKTDTRLFGLKNPSSGDI 71 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +GFD+D + ++ I D K ++ + +K R LQ+ ID ++ T R+ + Sbjct: 72 EGFDIDIAKQIAKDILGDEKKAEFKEVTSKTRIPMLQNGDIDAITATMTITDERKKEVDF 131 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + + GQ ++ K I S L G+ + G+T+ + + + + Sbjct: 132 --SDVYFEAGQSLLVKKGSSIKSTEDLKKGSKVLAVKGSTSSQNIREKAPDAS----VLE 185 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 FE E A +A + DA T D + LY + N ++ + + P A+ +G + Sbjct: 186 FENYAEAFTALKAGQGDALTTDNAILYGMADENK---QYQLTGGTFTDEPYGIAVKKGQS 242 Query: 236 EWYNIVSWTHYAMVTAEELG-ITQKNINQ 263 ++ + M G I +K I + Sbjct: 243 GLVKEINASLKKMKADGRYGKIYKKWIKE 271 >gi|324324679|gb|ADY19939.1| glytamine ABC transporter substrate-binding protein [Bacillus thuringiensis serovar finitimus YBT-020] Length = 276 Score = 199 bits (506), Expect = 5e-49, Method: Composition-based stats. Identities = 59/278 (21%), Positives = 106/278 (38%), Gaps = 24/278 (8%) Query: 1 MYKDFFVSIL-CLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + + CL +L + + IKKRG L G+ F Sbjct: 4 MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLIVGVKNDTNLFG 63 Query: 49 EVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + + + GQ ++ K I S+ + G + G+T+ + Sbjct: 124 EERKKEVDF--SDVYFKAGQSLLVKKGSDIKSIDDVKKGVKVLAVKGSTSTNNIRQKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQ 263 A+ +G + ++ M + E + +K I Q Sbjct: 235 GIAVQKGADDLTKEINSLIKDMKASGEYDKLYEKWIGQ 272 >gi|312115423|ref|YP_004013019.1| extracellular solute-binding protein family 3 [Rhodomicrobium vannielii ATCC 17100] gi|311220552|gb|ADP71920.1| extracellular solute-binding protein family 3 [Rhodomicrobium vannielii ATCC 17100] Length = 302 Score = 199 bits (506), Expect = 6e-49, Method: Composition-based stats. Identities = 52/263 (19%), Positives = 94/263 (35%), Gaps = 10/263 (3%) Query: 9 ILCLIILFFTSFSTNAS---ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 +L L + + L IK G + G + F+ + A GF +D C Sbjct: 7 VLGLALFAMPGLAQAQDLTGTLKKIKDTGTITIGYRETSIPFSYLGAENKPVGFAMDICE 66 Query: 66 ALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + + DD K Y+ + + R + + +D++ + R+ + Sbjct: 67 KIVDAVKKELKDDSIKTNYVAVTSSTRIPLIANGTVDLVCGSATNNAERQKQVSYTNS-- 124 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y ++ K I+S++ L G ++ AGTT L + +A N+ + + E Sbjct: 125 HYLSESKYVTKKASNINSIADLKGKTVVSTAGTTNIKQLNERNQADNLGLTILTAKDHAE 184 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-SPLAPAIIQGDTEWYNI 240 R A+ D L L + PS +VI D SK P + +GD + Sbjct: 185 GFLMVETDRAAAFVMDDILLAGLAANSKDPSLYVISTDAFSKAEPYGIMLQKGDEPFKKA 244 Query: 241 VSWTHYAMVTAEELGITQKNINQ 263 V + E + +K Sbjct: 245 VDDATAEIYKTEGPALYKKWFQS 267 >gi|42779786|ref|NP_977033.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus ATCC 10987] gi|52144672|ref|YP_082157.1| glytamine ABC transporter substrate-binding protein [Bacillus cereus E33L] gi|42735703|gb|AAS39641.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus ATCC 10987] gi|51978141|gb|AAU19691.1| ABC transporter, substrate-binding protein; probable glutamine-binding protein [Bacillus cereus E33L] Length = 276 Score = 199 bits (506), Expect = 6e-49, Method: Composition-based stats. Identities = 59/278 (21%), Positives = 106/278 (38%), Gaps = 24/278 (8%) Query: 1 MYKDFFVSIL-CLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + + CL +L + + IKKRG L G+ F Sbjct: 4 MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + + + GQ ++ K I S+ + G + G+T+ + Sbjct: 124 EERKKEVDF--SDVYFKAGQSLLVKKGSDIKSIDDVKKGVKVLAVKGSTSTNNIRQKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQ 263 A+ +G + ++ M + E + +K I Q Sbjct: 235 GIAVQKGADDLTKEINSLIKDMKASGEYDKLYEKWIGQ 272 >gi|115360990|ref|YP_778127.1| extracellular solute-binding protein [Burkholderia ambifaria AMMD] gi|115286318|gb|ABI91793.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia ambifaria AMMD] Length = 313 Score = 199 bits (506), Expect = 6e-49, Method: Composition-based stats. Identities = 53/240 (22%), Positives = 98/240 (40%), Gaps = 6/240 (2%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK- 77 + + L ++ G + G + F+ + A G+ ++ C+AL S+I D +K Sbjct: 38 APAQLTGTLAKVRSSGTIALGYRDASIPFSYLNARNQPIGYSIELCKALVSSIEDAVNKS 97 Query: 78 --IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 I+++P+ + R A+ S +D+ +T L R+ + PI + G ++ + Sbjct: 98 LTIRWVPVTSDNRIDAVVSGNVDLECGSTTSNLERQQRVAF--SPIIFVAGTKVMVKRGS 155 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I S L+ + V AGTT E L D + V + A + R DA+ Sbjct: 156 PIRSFRDLAAKKVAVTAGTTNEKALRDLDARFKLGIQLQVVPDHAQGFALVASGRADAFA 215 Query: 196 GDISALYALKLTNDRP-SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D LY L N ++ ++ D +S P + D + +V T + E+ Sbjct: 216 TDDVLLYGLIAENAGKGGQYDVVGDYLSYDPYGIMFRKDDPQLAQVVKSTFEELAVDGEI 275 >gi|188532628|ref|YP_001906425.1| Probable ABC transporter, periplasmic-binding protein [Erwinia tasmaniensis Et1/99] gi|188027670|emb|CAO95521.1| Probable ABC transporter, periplasmic-binding protein [Erwinia tasmaniensis Et1/99] Length = 280 Score = 199 bits (506), Expect = 6e-49, Method: Composition-based stats. Identities = 65/266 (24%), Positives = 111/266 (41%), Gaps = 20/266 (7%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKI 78 F+ +A L DIKK G +K F V A + G+DVDF +AL+ + K+ Sbjct: 30 FAAHADRLADIKKAGVVKVATFDANPPFGSVDAKTHEIVGYDVDFAKALAKTLG---VKL 86 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 Q +P N R LQS + D++ + T R + + GQ F++ +S Sbjct: 87 QLVPTNPANRIPLLQSGKADLIVADITITPERAKVIDF--SVPYFVTGQQFLVP----VS 140 Query: 139 SVSQLSG---ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 S +L G A I GTT E L + F + + +E + +A R A T Sbjct: 141 SPDKLDGYATARIGAVKGTTGEQELHNRFP----QSRVLSYEDIPLALSALRNGNVQAIT 196 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D + L L +++ +LP+++SK + + +G+ +V+ ++ E+ G Sbjct: 197 QDSTILAGLLDGAPDKAKYKVLPELLSKEEIGVGVKKGEASLLKVVND---ELLNLEKNG 253 Query: 256 ITQKNINQVSKDTTNPDVQRFLGIDK 281 K + T R I++ Sbjct: 254 QALKIYDTWFGPQTKSPQPRLFKIEE 279 >gi|206563592|ref|YP_002234355.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315] gi|198039632|emb|CAR55600.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315] Length = 298 Score = 199 bits (506), Expect = 6e-49, Method: Composition-based stats. Identities = 54/277 (19%), Positives = 94/277 (33%), Gaps = 11/277 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + F + L + A L IK G + GI V F+ G Sbjct: 1 MDRRFRWLAVALACALAGTAHAQALTGTLKKIKDTGVVSLGIRESSVPFSYSDNQQKNIG 60 Query: 59 FDVDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + D + + + + ++ +P+ ++ R LQ+ ID +T TL R+ Sbjct: 61 YSRDIASRIIDQLKTELNLPNLAVKEIPITSQNRIPLLQNGTIDFECGSTTNTLERQKQA 120 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + Y G F K G+ + L+G ++ AGT+ E L + M I Sbjct: 121 AFSNSIFLY--GIRFSTRKDSGVKDFADLAGKTVATTAGTSDERLLRKLNEEKAMNMTII 178 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + E R A+ D LY + P + + + A + + D Sbjct: 179 SAKDHAEAFMNVTTGRAVAFVMDEPLLYGEIAKDRNPGAYTVTGTPLVHENYACMMRRDD 238 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + +V M T+ G +K +Q P Sbjct: 239 PPFKRVVDGVIAKMQTS---GAAEKLYDQWFTQPIPP 272 >gi|238920803|ref|YP_002934318.1| glutamate/aspartate periplasmic-binding protein [Edwardsiella ictaluri 93-146] gi|238870372|gb|ACR70083.1| glutamate/aspartate periplasmic-binding protein [Edwardsiella ictaluri 93-146] Length = 300 Score = 199 bits (506), Expect = 6e-49, Method: Composition-based stats. Identities = 44/245 (17%), Positives = 92/245 (37%), Gaps = 7/245 (2%) Query: 14 ILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72 + T + + S L IK G + G V F+ G+ D+ A+ A+ Sbjct: 17 LFATTQGAADGSPTLQKIKDSGVIVVGHRESSVPFSYYDNQQRVVGYSQDYANAIVDAVK 76 Query: 73 DDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 + +++ LP+ ++ R LQ+ D+ +T R+ + + G Sbjct: 77 KQLNLPTLQVKLLPITSQNRIPLLQNGTYDVECGSTTHNAERQQQVAF--SNTLFIVGTR 134 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 + ++ G+ L+G + V +GTT+E+ L + M+ I + + + Sbjct: 135 LLTARESGVHDFRDLAGKPVVVTSGTTSEIMLNRMNEKDGMQMRIISAKDHGDAFRTLES 194 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 R A+ D + L + +P VI+ S + + D + + T + Sbjct: 195 GRAVAFMMDDALLAGERAKAKQPERWVIVGTPQSYEAYGCMLRRDDPAFKKLADDTIAHV 254 Query: 249 VTAEE 253 T+ + Sbjct: 255 QTSGQ 259 >gi|229022187|ref|ZP_04178737.1| hypothetical protein bcere0029_5500 [Bacillus cereus AH1272] gi|228739118|gb|EEL89564.1| hypothetical protein bcere0029_5500 [Bacillus cereus AH1272] Length = 273 Score = 199 bits (506), Expect = 6e-49, Method: Composition-based stats. Identities = 59/281 (20%), Positives = 109/281 (38%), Gaps = 24/281 (8%) Query: 1 MYKDFFVSIL-CLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + + CL +L + + IKKRG L G+ F Sbjct: 1 MKKLFTLIVFSCLFVLVVAGCGSKKDETKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 60 Query: 49 EVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 61 LKNPSTGQVEGFDVDIAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 120 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + + + GQ ++ K I S+ + G + G+T+ + + Sbjct: 121 EERKKEVDF--SDVYFKAGQSLLVKKGSDIKSIDDVKKGVKVLAVKGSTSTNNI----RQ 174 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 175 KSPESTVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 231 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSK 266 A+ +G + ++ M E + +K I Q + Sbjct: 232 GIAVQKGADDLTKEINSLLKDMKANGEYDKLYEKWIGQKQE 272 >gi|83746634|ref|ZP_00943684.1| Glutamate/aspartate-binding protein [Ralstonia solanacearum UW551] gi|207727924|ref|YP_002256318.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia solanacearum MolK2] gi|207742329|ref|YP_002258721.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia solanacearum IPO1609] gi|83726768|gb|EAP73896.1| Glutamate/aspartate-binding protein [Ralstonia solanacearum UW551] gi|206591166|emb|CAQ56778.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia solanacearum MolK2] gi|206593719|emb|CAQ60646.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia solanacearum IPO1609] Length = 298 Score = 199 bits (506), Expect = 6e-49, Method: Composition-based stats. Identities = 47/270 (17%), Positives = 98/270 (36%), Gaps = 9/270 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M ++L + + ++ L IK G + G+ + F+ G Sbjct: 1 MNLAKLATVLAAVGVLSSAAHAQELTGTLKKIKDTGTITLGVRDSSIPFSYNVGGVRTIG 60 Query: 59 FDVDFCRALSSAIFD----DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + D + A+ D +++ +P+ ++ R LQ+ ID+ +T L R+ Sbjct: 61 YSYDVATKIVEAVKDQLKLKDLQVKEIPVTSQNRITLLQNGTIDLECGSTTNNLERQKQA 120 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + G ++ K GI + L G ++ AGTT+E L + + I Sbjct: 121 SF--TDTIFIIGTRIMVKKDSGIKDWADLKGKNVVTTAGTTSERLLRKMNDDKQLGMNII 178 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + + R A+ D + LY + P++ V++ S+ + + D Sbjct: 179 STKDHGQSFLTLESGRAVAFMMDDALLYGERAKAKNPADWVVVAKPQSREAYGCMLRKDD 238 Query: 235 TEWYNIVSWTHYAMVTAEEL-GITQKNINQ 263 + + T M+ + +K Q Sbjct: 239 APFKTLADKTIAGMMKDGSIVAEYKKWFEQ 268 >gi|325693724|gb|EGD35643.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK150] Length = 312 Score = 198 bits (505), Expect = 7e-49, Method: Composition-based stats. Identities = 58/253 (22%), Positives = 103/253 (40%), Gaps = 14/253 (5%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 +S + A L +IKK G L+ + + F V NG ++G+D+ L+ + P Sbjct: 56 AASSKTVKARSLEEIKKSGKLRIAVFSDKKPFGYVDNNGKYQGYDIYLGDQLAKDLGVKP 115 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 +Y+P++A R L S ++DI N T R+ + A G + K Sbjct: 116 ---EYVPVDAANRAEYLISNKVDITLANFTVTDERKKQVDFAL--PYMKVSLGVVSPKGS 170 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I+ QL G ++ + GTT E YF+ + +++ + A R DA++ Sbjct: 171 VITKPEQLEGKTLIITKGTTAET----YFEKNYPNIKLQKYDQYSDAYQALLDGRGDAFS 226 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D + + A L N V + + +APA+ +G+TE N ++ + Sbjct: 227 TDNTEVLAWALENK--GFEVGITSLGDPDTIAPAVQKGNTELLNYINDEIK---KLGKEN 281 Query: 256 ITQKNINQVSKDT 268 K + T Sbjct: 282 FFHKAYEETLHPT 294 >gi|229171423|ref|ZP_04299008.1| hypothetical protein bcere0006_5510 [Bacillus cereus MM3] gi|228612127|gb|EEK69364.1| hypothetical protein bcere0006_5510 [Bacillus cereus MM3] Length = 276 Score = 198 bits (505), Expect = 7e-49, Method: Composition-based stats. Identities = 59/281 (20%), Positives = 106/281 (37%), Gaps = 24/281 (8%) Query: 1 MYKDFFVSIL-CLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + + CL +L + + IKKRG L G+ F Sbjct: 4 MKKLFTLIVFSCLFVLVVAGCGSKKDEVKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + + + GQ ++ K I S+ + G + G+T+ + Sbjct: 124 EERKKEVDF--SDVYFKAGQSLLVKKGSDIKSIDDVKKGVKVLAVKGSTSTNNIRQKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSK 266 A+ +G + ++ M E + +K I Q + Sbjct: 235 GIAVQKGADDLTKEINSLLKDMKANGEYDKLYEKWIGQKQE 275 >gi|229042502|ref|ZP_04190247.1| hypothetical protein bcere0027_5680 [Bacillus cereus AH676] gi|296501400|ref|YP_003663100.1| glutamine-binding protein [Bacillus thuringiensis BMB171] gi|228726855|gb|EEL78067.1| hypothetical protein bcere0027_5680 [Bacillus cereus AH676] gi|296322452|gb|ADH05380.1| glutamine-binding protein [Bacillus thuringiensis BMB171] Length = 276 Score = 198 bits (505), Expect = 7e-49, Method: Composition-based stats. Identities = 59/281 (20%), Positives = 106/281 (37%), Gaps = 24/281 (8%) Query: 1 MYKDFFVSIL-CLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + + CL +L + + IKKRG L G+ F Sbjct: 4 MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + + + GQ ++ K I S+ + G + G+T+ + Sbjct: 124 EERKKEVDF--SDVYFKAGQSLLVKKGSEIKSIDDVKKGVKVLAVKGSTSTNNIRQKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSK 266 A+ +G + ++ M E + +K I Q + Sbjct: 235 GIAVQKGADDLTKEINSLLKDMKANGEYDKLYEKWIGQKQE 275 >gi|254248250|ref|ZP_04941570.1| Extracellular solute-binding protein, family 3 [Burkholderia cenocepacia PC184] gi|124874751|gb|EAY64741.1| Extracellular solute-binding protein, family 3 [Burkholderia cenocepacia PC184] Length = 298 Score = 198 bits (505), Expect = 7e-49, Method: Composition-based stats. Identities = 50/251 (19%), Positives = 87/251 (34%), Gaps = 9/251 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS----KIQY 80 L IK G + GI V F+ G+ D + + + + ++ Sbjct: 27 GTLKKIKDTGVVSLGIRESSVPFSYSDNQQKNIGYSRDIASRVIDQLKTELNLPNLAVKE 86 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +P+ ++ R LQ+ ID +T TL R+ + Y G F K G+ Sbjct: 87 IPITSQNRIPLLQNGTIDFECGSTTNTLERQRQAAFSNSIFLY--GIRFSTRKDSGVKDF 144 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + L+G ++ AGT+ E L + M I + E R A+ D Sbjct: 145 ADLAGKTVATTAGTSDERLLRKLNEEKAMNMTIISAKDHAEAFMNVTTGRAVAFVMDEPL 204 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 LY + P + + + A + + D + +V M T+ G +K Sbjct: 205 LYGEIAKDRNPGAYTVAGTPLVHENYACMMRRDDPAFKRVVDGVIAKMQTS---GAAEKL 261 Query: 261 INQVSKDTTNP 271 +Q P Sbjct: 262 YDQWFMQPIPP 272 >gi|167838586|ref|ZP_02465445.1| putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia thailandensis MSMB43] Length = 299 Score = 198 bits (505), Expect = 7e-49, Method: Composition-based stats. Identities = 43/270 (15%), Positives = 91/270 (33%), Gaps = 9/270 (3%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + + + + L ++ G + G+ V F+ G Sbjct: 2 MKPLRPLLSIAIGCALAAAAHADDASPTLKKVRDTGVVTLGVRESSVPFSYYDQQQQTIG 61 Query: 59 FDVDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + + + I + ++ ++ +P+ ++ R +Q+ +D+ +T T R + Sbjct: 62 YSQEIALKIVDEIKKELNRPNLTVREIPITSQNRIPLVQNGTVDLECGSTTHTKERANQV 121 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + Y G I+ K G+ L+G ++ AGTT E L + M I Sbjct: 122 SFSNSIFQY--GMRLIVKKSSGVKDFPDLAGKTVATTAGTTEERLLRQWNAEKGMSMQII 179 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + + R A+ D LY K P ++ I + + + D Sbjct: 180 SAKDHADAFLNVKNGRAVAFFMDEPLLYGAKAKEANPGDYAITGNSPVSEAYGCMLRKDD 239 Query: 235 TEWYNIVSWTHYAMVTAEE-LGITQKNINQ 263 + + M + E + K N+ Sbjct: 240 PGFKQLADRVIARMQRSGEAEALYVKWFNR 269 >gi|241661990|ref|YP_002980350.1| family 3 extracellular solute-binding protein [Ralstonia pickettii 12D] gi|240864017|gb|ACS61678.1| extracellular solute-binding protein family 3 [Ralstonia pickettii 12D] Length = 302 Score = 198 bits (505), Expect = 7e-49, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 92/261 (35%), Gaps = 13/261 (4%) Query: 19 SFSTNA----SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS----SA 70 + +A L IK G + G+ + F+ G+ D ++ Sbjct: 21 GSAAHAEELTGTLKKIKDTGTITLGVRDSSIPFSYNVGGVRTIGYSYDVATKIAEDVKKQ 80 Query: 71 IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130 + K+ +P+ ++ R LQ+ ID+ +T L R+ + G + Sbjct: 81 LGLKDLKVNEIPVTSQNRITLLQNGTIDLECGSTTNNLERQKQASF--TNTIFIIGTRIM 138 Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190 + K G+ + L G ++ AGTT+E L M + I + + + R Sbjct: 139 VKKDSGVKDWADLKGKNVVTTAGTTSERLLRKMNDEKQMGMNIISTKDHGQSFLTLESGR 198 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 A+ D + LY + P++ V++ S+ + + D + + T M+ Sbjct: 199 AVAFMMDDALLYGERAKAKNPADWVVVAKPQSREAYGCMVRKDDKPFKALADKTIAGMM- 257 Query: 251 AEELGITQKNINQVSKDTTNP 271 + G + + P Sbjct: 258 --KDGTINAEYKKWFEQPVPP 276 >gi|229028439|ref|ZP_04184561.1| hypothetical protein bcere0028_5570 [Bacillus cereus AH1271] gi|228732888|gb|EEL83748.1| hypothetical protein bcere0028_5570 [Bacillus cereus AH1271] Length = 275 Score = 198 bits (505), Expect = 7e-49, Method: Composition-based stats. Identities = 59/281 (20%), Positives = 106/281 (37%), Gaps = 24/281 (8%) Query: 1 MYKDFFVSIL-CLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + + CL +L + + IKKRG L G+ F Sbjct: 4 MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + + + GQ ++ K I S+ + G + G+T+ + Sbjct: 124 EERKKEVDF--SDVYFKAGQSLLVKKGSDIKSIDDVKKGVKVLAVKGSTSTNNIRQKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSK 266 A+ +G + ++ M E + +K I Q + Sbjct: 235 GIAVQKGADDLTKEINSLLKDMKANGEYDKLYEKWIGQKQE 275 >gi|326318880|ref|YP_004236552.1| family 3 extracellular solute-binding protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375716|gb|ADX47985.1| extracellular solute-binding protein family 3 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 303 Score = 198 bits (505), Expect = 7e-49, Method: Composition-based stats. Identities = 62/249 (24%), Positives = 107/249 (42%), Gaps = 10/249 (4%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKGFDVDFCRALSSAIFD---- 73 A + I++ + G+ F+ V A G G+ VD C+A+ I + Sbjct: 24 AQAPADTMARIQQTRTITLGVRESAWPFSFVDAQNGGKAAGYSVDLCQAVVEDIKNTLKL 83 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 +++Y P++A ER L++ +ID+ +T T R +AF P + G ++ K Sbjct: 84 KDLEVKYRPVSAAERIPKLEAGEIDLECGSTTNTKAR--QERVAFGPTMFVAGIRVLVPK 141 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 +V L+G ++ V G+T+E L A+ +K VF+ +E A RA A Sbjct: 142 GTKADTVQDLAGMTVAVSKGSTSEKLLTQ-LTANEVKATVKVFDNNDEAFKALRAGTVKA 200 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 + D S L L N + ++S P A + + DT +V T + T+ E Sbjct: 201 FAQDDSLLLGLVARNKAQDALALSNFVLSVEPYAIMVRKSDTALMAVVDRTLGKLYTSRE 260 Query: 254 LG-ITQKNI 261 + I +K Sbjct: 261 IDPIYKKWF 269 >gi|217958226|ref|YP_002336772.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus AH187] gi|217064327|gb|ACJ78577.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus AH187] Length = 276 Score = 198 bits (505), Expect = 7e-49, Method: Composition-based stats. Identities = 59/281 (20%), Positives = 106/281 (37%), Gaps = 24/281 (8%) Query: 1 MYKDFFVSIL-CLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + + CL +L + + IKKRG L G+ F Sbjct: 4 MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + + + GQ ++ K I S+ + G + G+T+ + Sbjct: 124 EERKKEVDF--SDVYFKAGQSLLVKKGSDIKSIDDVKKGVKVLAVKGSTSTNNIRQKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSK 266 A+ +G + ++ M E + +K I Q + Sbjct: 235 GIAVQKGADDLTKEINSLLKDMKANGEYDKLYEKWIGQKQE 275 >gi|237745206|ref|ZP_04575687.1| amino acid transporter [Fusobacterium sp. 7_1] gi|229432435|gb|EEO42647.1| amino acid transporter [Fusobacterium sp. 7_1] Length = 291 Score = 198 bits (505), Expect = 8e-49, Method: Composition-based stats. Identities = 51/257 (19%), Positives = 103/257 (40%), Gaps = 18/257 (7%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 + A + +IK G ++ G+ T F V NG +G+DV F L+ + K++ Sbjct: 39 TTAKARTVQEIKDSGVIRIGVFTDKAPFGYVDENGKNQGYDVYFTNRLAKDLG---VKVE 95 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 Y+ L+ R ++ + DI++ N T R + + G + K I S Sbjct: 96 YISLDPASRVEYAETGKADIVAANFTVTPERAEKVDFSL--PYMKVSLGVVSPDKAVIKS 153 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + +L ++ V GTT E YF + + ++ + A R DA++ D + Sbjct: 154 IDELKDKTLIVSKGTTAEY----YFSKNYPEVKLQKYDSYADAYNALLDGRGDAFSTDNT 209 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI--- 256 + A P V + + +A A+ +G+ +++ W + + + Sbjct: 210 EVLAWAKA--NPGFTVGIDSLGDIDTIAVAVQKGN---KDLLDWINNEIKELGKKNFFHE 264 Query: 257 -TQKNINQVSKDTTNPD 272 + + + D+ +PD Sbjct: 265 AYKATLEPIYGDSADPD 281 >gi|222094394|ref|YP_002528453.1| ABC transporter , substrate-binding protein; glutamine-binding protein [Bacillus cereus Q1] gi|229194958|ref|ZP_04321739.1| hypothetical protein bcere0001_5370 [Bacillus cereus m1293] gi|221238451|gb|ACM11161.1| ABC transporter, substrate-binding protein; probable glutamine-binding protein [Bacillus cereus Q1] gi|228588526|gb|EEK46563.1| hypothetical protein bcere0001_5370 [Bacillus cereus m1293] Length = 276 Score = 198 bits (505), Expect = 8e-49, Method: Composition-based stats. Identities = 59/278 (21%), Positives = 106/278 (38%), Gaps = 24/278 (8%) Query: 1 MYKDFFVSIL-CLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + + CL +L + + IKKRG L G+ F Sbjct: 4 MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + + + GQ ++ K I S+ + G + G+T+ + Sbjct: 124 EERKKEVDF--SDVYFKAGQSLLVKKGSDIKSIDDVKKGVKVLAVKGSTSTNNIRQKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQ 263 A+ +G + ++ M + E + +K I Q Sbjct: 235 GIAVQKGADDLTKEINNLIKDMKASGEYDKLYEKWIGQ 272 >gi|118476326|ref|YP_893477.1| ABC transporter periplasmic glutamine-binding protein [Bacillus thuringiensis str. Al Hakam] gi|118415551|gb|ABK83970.1| amino acid ABC transporter substrate-binding protein, PAAT family [Bacillus thuringiensis str. Al Hakam] Length = 276 Score = 198 bits (505), Expect = 8e-49, Method: Composition-based stats. Identities = 59/278 (21%), Positives = 105/278 (37%), Gaps = 24/278 (8%) Query: 1 MYKDFFVSIL-CLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + + CL +L + + IKKRG L G+ F Sbjct: 4 MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDIAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + + + GQ ++ K I S+ + G + G+T+ + Sbjct: 124 EERKKEVDF--SDVYFKAGQSLLVKKGSDIKSIDDVKKGVKVLAVKGSTSTNNIRQKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQ 263 A+ +G + ++ M E + +K I Q Sbjct: 235 GIAVQKGADDLTKEINSLIKDMKANGEYDKLYEKWIGQ 272 >gi|229137440|ref|ZP_04266051.1| hypothetical protein bcere0013_5720 [Bacillus cereus BDRD-ST26] gi|228645998|gb|EEL02221.1| hypothetical protein bcere0013_5720 [Bacillus cereus BDRD-ST26] Length = 273 Score = 198 bits (505), Expect = 8e-49, Method: Composition-based stats. Identities = 59/281 (20%), Positives = 106/281 (37%), Gaps = 24/281 (8%) Query: 1 MYKDFFVSIL-CLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + + CL +L + + IKKRG L G+ F Sbjct: 1 MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 60 Query: 49 EVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 61 LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 120 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + + + GQ ++ K I S+ + G + G+T+ + Sbjct: 121 EERKKEVDF--SDVYFKAGQSLLVKKGSDIKSIDDVKKGVKVLAVKGSTSTNNIRQKSPE 178 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 179 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 231 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSK 266 A+ +G + ++ M E + +K I Q + Sbjct: 232 GIAVQKGADDLTKEINSLLKDMKANGEYDKLYEKWIGQKQE 272 >gi|229120290|ref|ZP_04249540.1| hypothetical protein bcere0016_6050 [Bacillus cereus 95/8201] gi|228663100|gb|EEL18690.1| hypothetical protein bcere0016_6050 [Bacillus cereus 95/8201] Length = 276 Score = 198 bits (505), Expect = 8e-49, Method: Composition-based stats. Identities = 59/278 (21%), Positives = 105/278 (37%), Gaps = 24/278 (8%) Query: 1 MYKDFFVSIL-CLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + + CL +L + + IKKRG L G+ F Sbjct: 4 MKKLFTLIVFSCLFVLVVAGCGSKKDEAKEMNTKQGGAIEQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + + + GQ ++ K I S+ + G + G+T+ + Sbjct: 124 EERKKEVDF--SDVYFKAGQSLLVKKGSDIKSIDDVKKGVKVLAVKGSTSTNNIRQKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQ 263 A+ +G + ++ M E + +K I Q Sbjct: 235 GIAVQKGADDLTKEINSLIKDMKANGEYDKLYEKWIGQ 272 >gi|229590085|ref|YP_002872204.1| putative ABC-type amino-acid transporter periplasmic solute-binding protein [Pseudomonas fluorescens SBW25] gi|229361951|emb|CAY48851.1| putative ABC-type amino-acid transporter periplasmic solute-binding protein [Pseudomonas fluorescens SBW25] Length = 282 Score = 198 bits (505), Expect = 8e-49, Method: Composition-based stats. Identities = 55/271 (20%), Positives = 103/271 (38%), Gaps = 5/271 (1%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 V + + S L D+ KRG L G + + A+G +GFD+D Sbjct: 9 KACVFLFAASASLASVVQAADSKLDDVLKRGHLIVGTGSTNAPWHFQGADGKLQGFDIDI 68 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 R ++ +F+DPSK++++ ++ R L + ++D+ + T R + Y Sbjct: 69 GRIVAKGLFNDPSKVEFVVQSSDARIPNLLTDKVDMSCQFITVTASRAQQVAFTL--PYY 126 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 +G G ++ + L A V + + K ++ V+ + Sbjct: 127 REGVGLLLPNNSKYKEIEDLQAAGDGVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLMY 186 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 A + R DA D S++ L + P + S A A+ +GD +W N V+ Sbjct: 187 QAVNSGRADAAATDQSSVKYLMVQ--NPGRYRSPAYAWSPQTYACAVKRGDQDWLNFVNT 244 Query: 244 THYAMVTAEELGITQKNINQVSK-DTTNPDV 273 + +T E + + Q D P + Sbjct: 245 ALHEAMTGVEFPTYKASFKQWFGVDLPEPAI 275 >gi|254247735|ref|ZP_04941056.1| Extracellular solute-binding protein, family 10 [Burkholderia cenocepacia PC184] gi|124872511|gb|EAY64227.1| Extracellular solute-binding protein, family 10 [Burkholderia cenocepacia PC184] Length = 342 Score = 198 bits (505), Expect = 8e-49, Method: Composition-based stats. Identities = 46/273 (16%), Positives = 95/273 (34%), Gaps = 9/273 (3%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + V+ L + A L I++ + G V F+ V A G GF D Sbjct: 49 RPLLVAACALACGASVAAEPLAGTLEKIRQSNLISIGHRETSVPFSYVDAGGKVIGFSQD 108 Query: 63 FCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 C + +A+ K ++++P+ ++ R +Q+ +D+ T R + Sbjct: 109 LCDRVIAAVKARTGKPDLQVRFIPVTSQNRIPLVQNGTVDLECGVTTNLAARHAQVAF-- 166 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + + GI L+G ++ GTT+E L + M I + Sbjct: 167 STTFFVATTRLLTRTTSGIRDFPDLAGKTVVTNQGTTSERLLRKMNEEKKMNMQIISAKD 226 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E + R AY D L ++ +P++ ++ S + + D ++ Sbjct: 227 YGEGRLTLESGRAAAYMMDDVLLAGVRQLAAKPADWQLVGTPQSSEAYGFMLRKDDPQFK 286 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 +V ++ + E+ ++ P Sbjct: 287 ALVDGVLVQLMKSGEIN---ALYDKWFMKPVPP 316 >gi|17544803|ref|NP_518205.1| amino-acid-binding periplasmic (PBP) ABC transporter protein [Ralstonia solanacearum GMI1000] gi|17427092|emb|CAD13612.1| probable amino-acid-binding periplasmic (pbp) abc transporter protein [Ralstonia solanacearum GMI1000] Length = 301 Score = 198 bits (505), Expect = 8e-49, Method: Composition-based stats. Identities = 45/264 (17%), Positives = 91/264 (34%), Gaps = 9/264 (3%) Query: 7 VSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 +++ I A L I+ + G+ + F+ + GF D C Sbjct: 10 LALAGAIAASVLPAQAEALDGTLKKIQDSNTILIGVRESSIPFSYRDSKNQIIGFSADLC 69 Query: 65 RALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 + A+ K +Q +P+ ++ R +Q+ +D+ T RE Sbjct: 70 SRVIDAVKQKVGKPDLQVQQIPVTSQNRTALVQNGSVDLECGVTTHLKSREQQTAF--ST 127 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + + G+ L+G S+ AGTT+E L M + I + Sbjct: 128 TFFIAATRLLTSTHSGVKDFPDLAGKSVITNAGTTSERILRKMNDEKKMNMNVISGKDYG 187 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E ++ R A+ D L + +P++ V+ S + + D ++ + Sbjct: 188 ESFLTLQSGRVQAFMMDDVLLAGARTLAQKPADWVVTGTPQSFEAYGFMLRKDDPQFKKL 247 Query: 241 VSWTHYAMVTAEEL-GITQKNINQ 263 V T ++ E+ + K + Sbjct: 248 VDDTLTGVMKRGEISTLYAKWFEK 271 >gi|107026160|ref|YP_623671.1| extracellular solute-binding protein [Burkholderia cenocepacia AU 1054] gi|116692656|ref|YP_838189.1| extracellular solute-binding protein [Burkholderia cenocepacia HI2424] gi|170738094|ref|YP_001779354.1| extracellular solute-binding protein [Burkholderia cenocepacia MC0-3] gi|105895534|gb|ABF78698.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia AU 1054] gi|116650656|gb|ABK11296.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia HI2424] gi|169820282|gb|ACA94864.1| extracellular solute-binding protein family 3 [Burkholderia cenocepacia MC0-3] Length = 298 Score = 198 bits (505), Expect = 8e-49, Method: Composition-based stats. Identities = 50/251 (19%), Positives = 87/251 (34%), Gaps = 9/251 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS----KIQY 80 L IK G + GI V F+ G+ D + + + + ++ Sbjct: 27 GTLKKIKDTGVVSLGIRESSVPFSYSDNQQKNIGYSRDIASRVIDQLKTELNLPNLAVKE 86 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +P+ ++ R LQ+ ID +T TL R+ + Y G F K G+ Sbjct: 87 IPITSQNRIPLLQNGTIDFECGSTTNTLERQRQAAFSNSIFLY--GIRFSTRKDSGVKDF 144 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + L+G ++ AGT+ E L + M I + E R A+ D Sbjct: 145 ADLAGKTVATTAGTSDERLLRKLNEEKAMNMTIISAKDHAEAFMNVTTGRAVAFVMDEPL 204 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 LY + P + + + A + + D + +V M T+ G +K Sbjct: 205 LYGEIAKDRNPGAYTVAGTPLVHENYACMMRRDDPAFKRVVDGVIAKMQTS---GAAEKL 261 Query: 261 INQVSKDTTNP 271 +Q P Sbjct: 262 YDQWFMRPIPP 272 >gi|262068036|ref|ZP_06027648.1| CjaA protein [Fusobacterium periodonticum ATCC 33693] gi|291378258|gb|EFE85776.1| CjaA protein [Fusobacterium periodonticum ATCC 33693] Length = 293 Score = 198 bits (504), Expect = 9e-49, Method: Composition-based stats. Identities = 50/258 (19%), Positives = 104/258 (40%), Gaps = 18/258 (6%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 + A + +IK G ++ G+ T F + NG +G+DV F L+ + + + Sbjct: 40 ASVAKARTVQEIKDSGVIRIGVFTDKAPFGYIDENGKNQGYDVYFTDRLAKDLGVN---V 96 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 +Y+ L+ R ++ + DI++ N T R + + G + I Sbjct: 97 EYISLDPASRVEYAETGKADIVAANFTVTPERAEKVDFSL--PYMKVSLGVVSPDGAVIK 154 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 SV +L ++ V GTT E YF ++ + ++ + A R DA++ D Sbjct: 155 SVEELKDKTLIVSKGTTAEY----YFSKNHPEVKLQKYDSYADAYNALLDGRGDAFSTDN 210 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI-- 256 + + A + P V + + +A A+ +G+T+ + W + + + Sbjct: 211 TEVLAWAKS--NPGFTVGIESLGDVDTIAVAVQKGNTDLLD---WINNEIKELGKENFFH 265 Query: 257 --TQKNINQVSKDTTNPD 272 + + + D+ +PD Sbjct: 266 EAYKATLEPIYGDSADPD 283 >gi|330808725|ref|YP_004353187.1| putative amino acid ABC transporter, periplasmic component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327376833|gb|AEA68183.1| putative amino acid ABC transporter, periplasmic component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 282 Score = 198 bits (504), Expect = 9e-49, Method: Composition-based stats. Identities = 51/263 (19%), Positives = 97/263 (36%), Gaps = 4/263 (1%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 V + S L + +RG L G + + A+G +GFD+D Sbjct: 9 KACVFLFAATTAAMGVAQAADSKLDSVLQRGKLIVGTGSTNAPWHFQGADGKLQGFDIDI 68 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 R ++ +F+DP K++++ ++ R L + ++D+ + T R + Y Sbjct: 69 ARMVAKGLFNDPEKVEFVVQSSDARIPNLLTDKVDMSCQFITVTASRAQQVAFTL--PYY 126 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 +G G ++ + L A V + + K ++ V+ + Sbjct: 127 REGVGLLLPANSKYKEIEDLKAAGDGVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLMY 186 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 A + R DA D S++ L + P + S A A+ +GD +W N V+ Sbjct: 187 QAVNSGRADAAATDQSSVKYLMVQ--NPGRYRSPAYAWSPQTYACAVKRGDQDWLNFVNT 244 Query: 244 THYAMVTAEELGITQKNINQVSK 266 T + +T E + Q Sbjct: 245 TLHEAMTGVEFPTYAASFKQWFG 267 >gi|294782141|ref|ZP_06747467.1| CjaA protein [Fusobacterium sp. 1_1_41FAA] gi|294480782|gb|EFG28557.1| CjaA protein [Fusobacterium sp. 1_1_41FAA] Length = 293 Score = 198 bits (504), Expect = 9e-49, Method: Composition-based stats. Identities = 50/258 (19%), Positives = 104/258 (40%), Gaps = 18/258 (6%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 + A + +IK G ++ G+ T F + NG +G+DV F L+ + ++ Sbjct: 40 ASVAKARTVQEIKDSGVIRIGVFTDKAPFGYIDENGKNQGYDVYFTDRLAKDLG---VQV 96 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 +Y+ L+ R ++ + DI++ N T R + + G + I Sbjct: 97 EYISLDPASRVEYAETGKADIVAANFTVTPERAEKVDFSL--PYMKVSLGVVSPDGAVIK 154 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 SV +L ++ V GTT E YF ++ + ++ + A R DA++ D Sbjct: 155 SVEELKDKTLIVSKGTTAEY----YFSKNHPEVKLQKYDSYADAYNALLDGRGDAFSTDN 210 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI-- 256 + + A + P V + + +A A+ +G+T+ + W + + + Sbjct: 211 TEVLAWAKS--NPGFTVGIESLGDVDTIAVAVQKGNTDLLD---WINNEIKELGKENFFH 265 Query: 257 --TQKNINQVSKDTTNPD 272 + + + D+ +PD Sbjct: 266 EAYKATLEPIYGDSADPD 283 >gi|228913329|ref|ZP_04076962.1| hypothetical protein bthur0012_5720 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228925828|ref|ZP_04088912.1| hypothetical protein bthur0010_5540 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228833843|gb|EEM79396.1| hypothetical protein bthur0010_5540 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228846238|gb|EEM91257.1| hypothetical protein bthur0012_5720 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 276 Score = 198 bits (504), Expect = 9e-49, Method: Composition-based stats. Identities = 59/278 (21%), Positives = 105/278 (37%), Gaps = 24/278 (8%) Query: 1 MYKDFFVSIL-CLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + + CL +L + + IKKRG L G+ F Sbjct: 4 MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAIEQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + + + GQ ++ K I S+ + G + G+T+ + Sbjct: 124 EERKKEVDF--SDVYFKAGQSLLVKKGSDIKSIDDVKKGVKVLAVKGSTSTNNIRQKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQ 263 A+ +G + ++ M E + +K I Q Sbjct: 235 GIAVQKGADDLTKEINSLIKDMKANGEYDKLYEKWIGQ 272 >gi|226331009|ref|ZP_03806527.1| hypothetical protein PROPEN_04939 [Proteus penneri ATCC 35198] gi|225201804|gb|EEG84158.1| hypothetical protein PROPEN_04939 [Proteus penneri ATCC 35198] Length = 287 Score = 198 bits (504), Expect = 9e-49, Method: Composition-based stats. Identities = 48/266 (18%), Positives = 92/266 (34%), Gaps = 9/266 (3%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 + L L I + G V F+ G+ D+ + Sbjct: 1 MILGAAGAVQAEELTGTLKKINDNDIIIVGHRESSVPFSYYDNQQKVVGYSQDYSNLIVQ 60 Query: 70 AIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 A+ D K ++ +P+ ++ R LQ+ D +T R+ + Sbjct: 61 AVKDKIGKPNLQVRLIPITSQNRIPLLQNGTFDFECGSTTNNEARQQQASF--SNTIFIV 118 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 G + K GI + LSG ++ V +GTT+E+ L M I + + Sbjct: 119 GTRLLAKKDSGIKDFADLSGKNVVVTSGTTSEMLLNKLNDEKKMNMRIISAKDHGDSFRT 178 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + R A+ D + L + +P E I+ S+ + + D ++ ++ T Sbjct: 179 LESGRAVAFMMDDALLAGERAKAKKPGEWEIVGTPQSEEAYGCMLRKDDAQFKALIDETI 238 Query: 246 YAMVTAEELGITQKNINQVSKDTTNP 271 A++ G +K+ N+ P Sbjct: 239 ---ANAQKSGEAEKSFNRWFNAPIPP 261 >gi|228932067|ref|ZP_04094959.1| hypothetical protein bthur0009_5520 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|301052294|ref|YP_003790505.1| ABC transporter substrate-binding protein [Bacillus anthracis CI] gi|228827650|gb|EEM73392.1| hypothetical protein bthur0009_5520 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|300374463|gb|ADK03367.1| ABC transporter, substrate-binding protein; probable glutamine-binding protein [Bacillus cereus biovar anthracis str. CI] Length = 276 Score = 198 bits (504), Expect = 9e-49, Method: Composition-based stats. Identities = 59/278 (21%), Positives = 105/278 (37%), Gaps = 24/278 (8%) Query: 1 MYKDFFVSIL-CLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + + CL +L + + IKKRG L G+ F Sbjct: 4 MKKLFTLIVFSCLFVLVVAGCGSKKEEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + + + GQ ++ K I S+ + G + G+T+ + Sbjct: 124 EERKKEVDF--SDVYFKAGQSLLVKKGSDIKSIDDVKKGVKVLAVKGSTSTNNIRQKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQ 263 A+ +G + ++ M E + +K I Q Sbjct: 235 GIAVQKGADDLTKEINSLIKDMKANGEYDKLYEKWIGQ 272 >gi|167614881|ref|ZP_02383516.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia thailandensis Bt4] Length = 299 Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats. Identities = 51/271 (18%), Positives = 97/271 (35%), Gaps = 10/271 (3%) Query: 1 MYKDF--FVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K F +SI L + + +AS L I+ + G+ V F+ Sbjct: 1 MMKPFRPLLSIAVGCTLAAAAHAEDASPTLKKIRDTSVVTLGVRESSVPFSYYDQRQQTI 60 Query: 58 GFDVDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ + + I + ++ ++ +P+ ++ R +Q+ +D+ +T T R Sbjct: 61 GYSQEIALKIVDEIKKELNRTNLTVREIPITSQNRIPLVQNGTVDLECGSTTHTKERANQ 120 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + + Y G I K G+ L+G ++ AGTT E L + M Sbjct: 121 VSFSNSIFQY--GMRLIAKKSSGVKDFPDLAGKTVATTAGTTEERLLRQWNAEKGMSMQI 178 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + + ++ R A+ D LY K P ++VI + + Sbjct: 179 ISAKDHADAFLNVKSGRAVAFFMDEPLLYGAKAKEANPGDYVITGSSPVSEAYGCMLRKD 238 Query: 234 DTEWYNIVSWTHYAMVTAEE-LGITQKNINQ 263 D + + M + E + K N+ Sbjct: 239 DPGFKQLADRVIARMQRSGEAEALYVKWFNR 269 >gi|163938563|ref|YP_001643447.1| extracellular solute-binding protein [Bacillus weihenstephanensis KBAB4] gi|229131583|ref|ZP_04260466.1| hypothetical protein bcere0014_5420 [Bacillus cereus BDRD-ST196] gi|163860760|gb|ABY41819.1| extracellular solute-binding protein family 3 [Bacillus weihenstephanensis KBAB4] gi|228651874|gb|EEL07828.1| hypothetical protein bcere0014_5420 [Bacillus cereus BDRD-ST196] Length = 276 Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats. Identities = 59/281 (20%), Positives = 109/281 (38%), Gaps = 24/281 (8%) Query: 1 MYKDFFVSIL-CLIILFFTSFSTNAS-----------ILGDIKKRGFLKCGINTGLVGFA 48 M K F + + CL +L + + IKKRG L G+ F Sbjct: 4 MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQDGAVEQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDIAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + + + GQ ++ K I S+ + G + G+T+ + + Sbjct: 124 EERKKEVDF--SDVYFKAGQSLLVKKGSDIKSIDDVKKGVKVLAVKGSTSTNNI----RQ 177 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 178 KSPESTVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSK 266 A+ +G + ++ M E + +K I Q + Sbjct: 235 GIAVQKGADDLTKEINSLLKDMKANGEYDKLYEKWIGQKQE 275 >gi|187927460|ref|YP_001897947.1| family 3 extracellular solute-binding protein [Ralstonia pickettii 12J] gi|309779838|ref|ZP_07674593.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Ralstonia sp. 5_7_47FAA] gi|187724350|gb|ACD25515.1| extracellular solute-binding protein family 3 [Ralstonia pickettii 12J] gi|308921415|gb|EFP67057.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Ralstonia sp. 5_7_47FAA] Length = 302 Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats. Identities = 46/261 (17%), Positives = 92/261 (35%), Gaps = 13/261 (4%) Query: 19 SFSTNA----SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS----SA 70 + +A L IK G + G+ + F+ G+ D ++ Sbjct: 21 GSAAHAEELTGTLKKIKDTGTITLGVRDSSIPFSYNVGGVRTIGYSYDVATKIAEDVKKQ 80 Query: 71 IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130 + K+ +P+ ++ R LQ+ ID+ +T L R+ + G + Sbjct: 81 LGLKDLKVNEIPVTSQNRITLLQNGTIDLECGSTTNNLERQKQASF--TNTIFIIGTRIM 138 Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190 + K G+ + L G ++ AGTT+E L M + I + + + R Sbjct: 139 VKKDSGVKDWADLKGKNVVTTAGTTSERLLRKMNDEKQMGMNIISTKDHGQSFLTLESGR 198 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 A+ D + LY + P+E V++ S+ + + D + + T M+ Sbjct: 199 AVAFMMDDALLYGERAKAKNPAEWVVVAKPQSREAYGCMVRKDDKPFKALADKTIAGMM- 257 Query: 251 AEELGITQKNINQVSKDTTNP 271 + G + + P Sbjct: 258 --KDGTINAEYKKWFEQPVPP 276 >gi|311280748|ref|YP_003942979.1| extracellular solute-binding protein family 3 [Enterobacter cloacae SCF1] gi|308749943|gb|ADO49695.1| extracellular solute-binding protein family 3 [Enterobacter cloacae SCF1] Length = 276 Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats. Identities = 61/276 (22%), Positives = 104/276 (37%), Gaps = 15/276 (5%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDV 61 K V++ L + + A L +IK G +K F V + G+D+ Sbjct: 9 KRTAVALSVLATAGLAAQTARADQLANIKAAGVIKVATFDANPPFGSVDGKTHELVGYDI 68 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 DF AL+ ++ K++ + N R LQS + D++ + T R + Sbjct: 69 DFANALAKSLG---VKLELVATNPANRIPLLQSGKADVIVADITITPERAQVIDF--STP 123 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + GQ F++ K G + A I GTT E L F + + ++ + Sbjct: 124 YFVTGQQFLVAAKAG-DQLEDYQHARIGAVKGTTGEQALHQRFP----QSRVLAYDDIPL 178 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A R A T D + L L + ILPD++SK + + +G+ N V Sbjct: 179 ALTALRNGNVQAITQDSTILAGLLAGAPDKASFKILPDLLSKEEIGVGVKKGEPALLNAV 238 Query: 242 SWTHYAMVTAEELGITQKNINQVSK-DTTNPDVQRF 276 + + E+ G K ++ T P + F Sbjct: 239 N---AELGRLEKSGEAAKIYDRWFGPHTPTPQPRSF 271 >gi|261344518|ref|ZP_05972162.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Providencia rustigianii DSM 4541] gi|282567430|gb|EFB72965.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Providencia rustigianii DSM 4541] Length = 280 Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats. Identities = 61/278 (21%), Positives = 105/278 (37%), Gaps = 16/278 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59 M S L + L T+ +A L DIK+ G ++ + F + G+ Sbjct: 1 MKARILTSALLVAGLALTANVASADKLDDIKQAGVIRISVFDSNPPFGFIDPKTKKLAGY 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D +A++ + K++ P N R L S ++D++ N T R + + Sbjct: 61 DIDIAQAIADDLG---VKLELRPTNPANRIPLLTSGKVDLIGANFTITDERAKQVDFSIP 117 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ FI K + + ++ I GT E+TL + F I ++ Sbjct: 118 D--FATGQKFIARKG-VLKTPEDIAPLRIGADKGTVQEVTLRERFP----NTKVISYDDT 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEW 237 + AA R A T D + L L ++ I P ++K A A +G+T Sbjct: 171 PQAFAALRNGNVQAITQDDAKLVGLLGNLPEKVKADFEISPFSLTKEYQALAASKGETRL 230 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 V+ T + E+ G + N+ T R Sbjct: 231 VESVNETL---LKLEKQGKANEIYNRWFGPETKAAQPR 265 >gi|107028354|ref|YP_625449.1| extracellular solute-binding protein [Burkholderia cenocepacia AU 1054] gi|116686350|ref|YP_839597.1| extracellular solute-binding protein [Burkholderia cenocepacia HI2424] gi|105897518|gb|ABF80476.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia AU 1054] gi|116652065|gb|ABK12704.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia HI2424] Length = 313 Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats. Identities = 52/240 (21%), Positives = 98/240 (40%), Gaps = 6/240 (2%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK- 77 + + L ++ G + G + F+ + A G+ ++ C+AL ++I D ++ Sbjct: 38 APAQLTGTLAKVRGSGTIALGYRDASIPFSYLNARNQPIGYSIELCKALVASIEDAINQS 97 Query: 78 --IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 I+++P+ + R A+ S ++D+ +T L R+ + PI + G ++ + Sbjct: 98 LTIRWVPVTSDNRIDAVVSGKVDLECGSTTSNLERQKRVAF--SPIFFVAGTKVMVKRGA 155 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I S L+G + V AGTT E L D + V + A DA+ Sbjct: 156 PIRSFRDLAGKKVAVTAGTTNEKALRDLNDKFRLGVQLQVVPDHAQGFALVANGSADAFA 215 Query: 196 GDISALYALKLTNDRP-SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D LY L N ++ ++ D +S P + D + IV T + E+ Sbjct: 216 TDDVLLYGLIAENASKGGQYDVVGDFLSYDPYGIMFRKDDPQLAQIVKSTFQELAADGEI 275 >gi|157150751|ref|YP_001450271.1| amino acid transport protein [Streptococcus gordonii str. Challis substr. CH1] gi|262282452|ref|ZP_06060220.1| amino acid transporter [Streptococcus sp. 2_1_36FAA] gi|157075545|gb|ABV10228.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus gordonii str. Challis substr. CH1] gi|262261743|gb|EEY80441.1| amino acid transporter [Streptococcus sp. 2_1_36FAA] Length = 284 Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats. Identities = 58/278 (20%), Positives = 113/278 (40%), Gaps = 21/278 (7%) Query: 5 FFVSILCLIILFFTSFSTNAS---------ILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 V L L ++F T+ + + + +IKK G L+ + F V +G Sbjct: 8 LTVMTLALALVFITACGASKNSNASSSKARTIDEIKKSGELRIAVFGDKKPFGYVDNDGS 67 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 ++G+D++ L+ + K++Y+ ++A R L S ++DI N T R+ + Sbjct: 68 YQGYDIELGNQLAKDLG---VKVKYVSVDAANRAEYLISNKVDITLANFTVTDERKKQVD 124 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 A G + K I V +L G ++ V GTT E YF+ ++ + Sbjct: 125 FAL--PYMKVSLGVVSPKDALIKDVKELKGKTLIVTKGTTAET----YFEKNHPEVKLQK 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 +++ + A R DA++ D + + A L N V + + +APA+ +G+ Sbjct: 179 YDQYSDAYQALLDGRGDAFSTDNTEVLAWALENK--GYEVGITSLGDPDTIAPAVQKGNK 236 Query: 236 EWYNIVSWTHYAMVTAEEL-GITQKNINQVSKDTTNPD 272 E + ++ + +K ++ D D Sbjct: 237 ELLDFINKDIEKLGKENFFHKAYEKTLHPTYGDAAKAD 274 >gi|308071222|ref|YP_003872827.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain protein [Paenibacillus polymyxa E681] gi|305860501|gb|ADM72289.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain protein [Paenibacillus polymyxa E681] Length = 291 Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats. Identities = 62/253 (24%), Positives = 110/253 (43%), Gaps = 17/253 (6%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 +S S + + DIKK G ++ G+ F V + G +GFDV + + + D SK Sbjct: 33 SSGSAKFASIEDIKKNGKIRIGVFADKPPFGYVDSEGKNQGFDVYIAKRFAKDLLGDESK 92 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++++ ++A R L+S ++DI+ N T R+ + A G + I Sbjct: 93 VEFVLVDAASRVAYLESNKVDIIMANFTVTDERKEKVDFAN--PYMKLSFGIVSPDSAPI 150 Query: 138 SSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 +++ QL + + V GTT E YF + + F++ EI +A + R A Sbjct: 151 TTIDQLKNSDQKLIVAKGTTAET----YFTKNYPDIKLLKFDQYTEIFSALKDKRGAAIA 206 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D + L A P V +P + +APA+ +G+ E + W + + T + Sbjct: 207 NDNTELIAWAKA--NPGFTVTIPAFGGQDTIAPAVAKGNKELLD---WINNELATLGKEN 261 Query: 256 ITQKNINQVSKDT 268 ++Q KDT Sbjct: 262 F----VHQAYKDT 270 >gi|229114241|ref|ZP_04243662.1| hypothetical protein bcere0017_5430 [Bacillus cereus Rock1-3] gi|228669261|gb|EEL24682.1| hypothetical protein bcere0017_5430 [Bacillus cereus Rock1-3] Length = 275 Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats. Identities = 57/281 (20%), Positives = 105/281 (37%), Gaps = 24/281 (8%) Query: 1 MYKDFFVSIL-CLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + + CL +L + + IKKRG L G+ F Sbjct: 4 MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAIEQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKA 166 R+ + + + GQ ++ K I + + G + G+T+ + Sbjct: 124 EERKKEVDF--SDVYFKAGQSLLVKKGSNIKGIDDIKQGVKVLAVKGSTSTNNIRQKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E +A + D T D + LY + + + ++ I + P Sbjct: 182 A----TVLEFENYSEAFTGLKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSK 266 A+ +G + ++ M + E + +K I Q + Sbjct: 235 GIAVQKGADDLTKEINSLLKDMKASGEYDKLYEKWIGQKQE 275 >gi|332111811|gb|EGJ11791.1| extracellular solute-binding protein [Rubrivivax benzoatilyticus JA2] Length = 295 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 55/275 (20%), Positives = 115/275 (41%), Gaps = 15/275 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L + + A L IK+ G + G+ G + +G + G+ Sbjct: 1 MKKTLLAAATLLAV-----GAVQADTLSKIKETGTVTMGVRESS-GLSYTLGDGKFVGYH 54 Query: 61 VDFCRA----LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +D C+ + + I+Y P+ ++ R +Q+ +DI +T + R+ + Sbjct: 55 IDVCQKVLSDIRKKLGLSSLTIKYQPVTSQNRIPLVQNGTVDIECGSTTNNVARQKDVAF 114 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 A T+ + + GI+S++QL G ++ GTT+ TL + +A+ + + + Sbjct: 115 AV--TTFVEEVRIAVKADSGINSIAQLVGKTVATTTGTTSVQTLRKHERANGVDFKEVYG 172 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + + R DA+ D S L T+ P+ I+ +++S P+A + + D Sbjct: 173 KDHADSFLLLESGRADAFVMDGSILAKNIATSKNPAGFKIVGEVLSVEPIAIMLRKDDAA 232 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + V + A + + +L K ++ P Sbjct: 233 FKAAVDESIKAQIKSGDL---AKTYDKWFLQPIPP 264 >gi|212711638|ref|ZP_03319766.1| hypothetical protein PROVALCAL_02713 [Providencia alcalifaciens DSM 30120] gi|212685740|gb|EEB45268.1| hypothetical protein PROVALCAL_02713 [Providencia alcalifaciens DSM 30120] Length = 279 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 61/278 (21%), Positives = 106/278 (38%), Gaps = 16/278 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59 M F S L + L T+ +A L DIK+ G ++ + F + G+ Sbjct: 1 MKARFLTSALLVAGLALTANVASADKLDDIKQAGVIRISVFDSNPPFGFIDPQTKKLAGY 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D +A++ + K++ P N R L S ++D++ N T R + + Sbjct: 61 DIDIAQAIADDLG---VKLELRPTNPANRIPLLTSGKVDLIGANFTITDERAKQVDFSIP 117 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ FI K + + ++ I GT E+TL + F + I ++ Sbjct: 118 D--FATGQKFIARKG-VLKTPEDIAPLRIGADKGTVQEVTLRERFPST----KVISYDDT 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEW 237 + AA R A T D + L L ++ I P ++K A +G+T Sbjct: 171 PQAFAALRNGNVQAITQDDAKLVGLLGNLPEKVKADFEISPFSLTKEYQALGASKGETRL 230 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 V+ T + E+ G + N+ T R Sbjct: 231 IENVNATL---LKLEKEGKANEIYNRWFGPDTKAAQPR 265 >gi|227546810|ref|ZP_03976859.1| ABC superfamily ATP binding cassette transporter, binding protein [Bifidobacterium longum subsp. infantis ATCC 55813] gi|312132398|ref|YP_003999737.1| hisj2 [Bifidobacterium longum subsp. longum BBMN68] gi|322691558|ref|YP_004221128.1| amino acid ABC transporter substrate-binding protein [Bifidobacterium longum subsp. longum JCM 1217] gi|227212772|gb|EEI80653.1| ABC superfamily ATP binding cassette transporter, binding protein [Bifidobacterium longum subsp. infantis ATCC 55813] gi|311772697|gb|ADQ02185.1| HisJ2 [Bifidobacterium longum subsp. longum BBMN68] gi|320456414|dbj|BAJ67036.1| amino acid ABC transporter substrate binding component [Bifidobacterium longum subsp. longum JCM 1217] Length = 300 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 61/259 (23%), Positives = 112/259 (43%), Gaps = 18/259 (6%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 +S + A L +IKK G +K + + F V +G ++G+DV F L+ + DP Sbjct: 47 SSANAKARSLDEIKKSGKIKIAVFSDKAPFGYVDKDGKYQGYDVYFAEQLAKDLGVDP-- 104 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 +Y ++ R L S ++D++ N T R+ + A G + + I Sbjct: 105 -EYTSVDPAARVDVLTSNKVDLVLANFTVTDERKEKVDFA--KPYMKVALGVVSPESAQI 161 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + VSQL G ++ + GTT E +F+ + +++ + A R DA++ D Sbjct: 162 TDVSQLDGKTLIIAKGTTAET----WFEKNAPNVKLQKYDQYADAYNALLDGRGDAFSTD 217 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI- 256 + + A +N V + + +APA+ +G+TE N V+ +V + Sbjct: 218 NTEVLAWAKSNK--GFKVGITHLGDDDTIAPAVQKGNTELLNFVND---EIVKLGKDNFF 272 Query: 257 ---TQKNINQVSKDTTNPD 272 Q+ + V + NPD Sbjct: 273 HKDYQETLEPVYGNEVNPD 291 >gi|326318773|ref|YP_004236445.1| family 3 extracellular solute-binding protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375609|gb|ADX47878.1| extracellular solute-binding protein family 3 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 300 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 54/259 (20%), Positives = 107/259 (41%), Gaps = 10/259 (3%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC-RALS---SAIFD 73 +F+ + L IK G + G+ G + +G + GF D C R ++ + Sbjct: 17 GAFAQSNDTLAKIKASGTITEGVRESS-GLSYTLGDGKYTGFHYDVCARVIADVQKQLGL 75 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 + +Y P+ ++ R +Q+ +DI +T R+ + A TY + + Sbjct: 76 AKLETKYQPVTSQNRIPLVQNGTVDIECGSTTNNQARQKDVAFAV--TTYVEEVRIAVKA 133 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 GIS + L+G +I GTT+ TL +A + + + + + + R DA Sbjct: 134 NSGISGIKDLNGKTIATTTGTTSVQTLRKNKRADGLTFKEVFGKDHSDSFLLLESGRADA 193 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 + D S L + + P++ I+ + +S P+A I + D + V + M+ + E Sbjct: 194 FIMDGSILASNIAKSKAPNDFKIVGETLSVEPIAIMIRKDDPAFKKAVDDSLKGMMKSGE 253 Query: 254 LGITQKNINQVSKDTTNPD 272 + K ++ P+ Sbjct: 254 M---AKLYDKWFMQPIPPN 269 >gi|73540829|ref|YP_295349.1| extracellular solute-binding protein [Ralstonia eutropha JMP134] gi|72118242|gb|AAZ60505.1| extracellular solute-binding protein, family 3 [Ralstonia eutropha JMP134] Length = 297 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 56/272 (20%), Positives = 99/272 (36%), Gaps = 9/272 (3%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 ++L L + A L I + V F+ + A GF VD Sbjct: 5 PVVAAVLIAAGLPLGASDVYAQTLEKIASSDKITVSYREAAVPFSYLLAPHKAVGFSVDL 64 Query: 64 CRALSSA----IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 A+ + K+ Y+P+ + R L S D+ +T T R + + Sbjct: 65 TEAIIDDVRSRLKKPNLKVDYVPVTGQNRIPMLVSGTYDLECGSTTNTSARGKEVAFSIN 124 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 ++ G + K GI + S L+ ++ AG+T E L+ Y HN+ I + Sbjct: 125 V--FYAGTRLLTKKNSGIKNYSDLTKKTVASTAGSTNEKLLSQYSADHNLDIQLISGKDY 182 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R A D L+ L+ + PS I+ D + P A + + DTE+ Sbjct: 183 ADAMQLVLNDRAVALALDDVLLFGLRANSRSPSALEIVGDTLQVEPYACMVRKDDTEFKK 242 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 +V T ++ + E + + + P Sbjct: 243 LVDGTITRLMKSGE---FTRLYKKWFESPIPP 271 >gi|30260794|ref|NP_843171.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. Ames] gi|47525919|ref|YP_017268.1| amino acid ABC transporter amino acid-binding protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49183632|ref|YP_026884.1| amino acid ABC transporter amino acid-binding protein [Bacillus anthracis str. Sterne] gi|49476850|ref|YP_034898.1| glutamine ABC transporter substrate-binding protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|65318066|ref|ZP_00391025.1| COG0834: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Bacillus anthracis str. A2012] gi|165872945|ref|ZP_02217568.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0488] gi|167635159|ref|ZP_02393475.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0442] gi|167640878|ref|ZP_02399136.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0193] gi|170689027|ref|ZP_02880227.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0465] gi|170708475|ref|ZP_02898917.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0389] gi|177652832|ref|ZP_02935205.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0174] gi|190568524|ref|ZP_03021430.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis Tsiankovskii-I] gi|196035755|ref|ZP_03103158.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus W] gi|196041840|ref|ZP_03109129.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus NVH0597-99] gi|196047174|ref|ZP_03114391.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus 03BB108] gi|218901836|ref|YP_002449670.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus AH820] gi|227816490|ref|YP_002816499.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. CDC 684] gi|228944392|ref|ZP_04106765.1| hypothetical protein bthur0007_5660 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229182974|ref|ZP_04310206.1| hypothetical protein bcere0004_5530 [Bacillus cereus BGSC 6E1] gi|229602354|ref|YP_002865238.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0248] gi|254684283|ref|ZP_05148143.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. CNEVA-9066] gi|254722087|ref|ZP_05183876.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A1055] gi|254738747|ref|ZP_05196450.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. Western North America USA6153] gi|254742041|ref|ZP_05199728.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. Kruger B] gi|254754973|ref|ZP_05207007.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. Vollum] gi|254762296|ref|ZP_05214140.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. Australia 94] gi|30254243|gb|AAP24657.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. Ames] gi|47501067|gb|AAT29743.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49177559|gb|AAT52935.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. Sterne] gi|49328406|gb|AAT59052.1| ABC transporter, substrate-binding protein; probable glutamine-binding protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|164711299|gb|EDR16853.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0488] gi|167511098|gb|EDR86486.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0193] gi|167529418|gb|EDR92169.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0442] gi|170126596|gb|EDS95481.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0389] gi|170667012|gb|EDT17775.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0465] gi|172081866|gb|EDT66935.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0174] gi|190560318|gb|EDV14297.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis Tsiankovskii-I] gi|195991722|gb|EDX55687.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus W] gi|196022044|gb|EDX60734.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus 03BB108] gi|196027334|gb|EDX65952.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus NVH0597-99] gi|218539731|gb|ACK92129.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus AH820] gi|227003893|gb|ACP13636.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. CDC 684] gi|228600431|gb|EEK58019.1| hypothetical protein bcere0004_5530 [Bacillus cereus BGSC 6E1] gi|228815294|gb|EEM61542.1| hypothetical protein bthur0007_5660 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229266762|gb|ACQ48399.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0248] Length = 276 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 59/278 (21%), Positives = 105/278 (37%), Gaps = 24/278 (8%) Query: 1 MYKDFFVSIL-CLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + + CL +L + + IKKRG L G+ F Sbjct: 4 MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + + + GQ ++ K I S+ + G + G+T+ + Sbjct: 124 EERKKEVDF--SDVYFKAGQSLLVKKGSDIKSIDDVKKGVKVLAVKGSTSTNNIRQKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQ 263 A+ +G + ++ M E + +K I Q Sbjct: 235 GIAVQKGADDLTKEINSLIKDMKANGEYDKLYEKWIGQ 272 >gi|71735103|ref|YP_276039.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71555656|gb|AAZ34867.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 358 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 47/264 (17%), Positives = 90/264 (34%), Gaps = 10/264 (3%) Query: 6 FVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVD 62 + + L T L IK+ G + G + F+ + A+G G+ D Sbjct: 61 LLGVAITAALISTPVFAAELTGTLKKIKESGTITLGHRDASIPFSYIADASGVPMGYSHD 120 Query: 63 FCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 + AI D K++Y + ++ R +Q+ +D+ +T + R+ + + Sbjct: 121 IQLKIVEAIKKDLDMPDLKVKYNLVTSQTRIPLVQNGTVDVECGSTTNNVERQQQVDFSI 180 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + G + K L G ++ AGTT+E L M + I + Sbjct: 181 GI--FEVGTRLLSKKDSSYKDFDDLKGKNVVTTAGTTSERILKAMNADKQMGMNVISAKD 238 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E + R A+ D + L +P + + S + +GD + Sbjct: 239 HGESFQMLESGRAVAFMMDDALLAGEMAKAKKPDDWAVTGTAQSYEIYGCMVRKGDAPFK 298 Query: 239 NIVSWTHYAMVTAEELG-ITQKNI 261 V A + ++ I K Sbjct: 299 KAVDDAIVATYKSGDINAIYSKWF 322 >gi|226942880|ref|YP_002797953.1| amino acid ABC transporter perplasmic binding protein [Azotobacter vinelandii DJ] gi|226717807|gb|ACO76978.1| amino acid ABC transporter, perplasmic binding protein [Azotobacter vinelandii DJ] Length = 302 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 48/274 (17%), Positives = 95/274 (34%), Gaps = 12/274 (4%) Query: 5 FFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDV 61 S L + + T+F+ L IK G + G + F+ + A+ G+ Sbjct: 7 LLGSALAVALSSGTAFAAEELTGTLKKIKDTGTITLGHRDASIPFSYLGGASRQPIGYSH 66 Query: 62 DFCRALSSAI----FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 D + A+ K++Y + ++ R +Q+ +D+ +T R+ + + Sbjct: 67 DLQLKVVEALKQQLGLPELKVRYTLVTSQTRIPLVQNGTVDLECGSTTNNQERQQQVAFS 126 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + G + K GI+ L G ++ AGTT+E L M + I + Sbjct: 127 VGI--FEVGTRLLTRKTSGIADFPDLKGKNVVTTAGTTSERLLKAMNVERQMGMNIIAAK 184 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E + R A+ D + LY +P + ++ S + + D + Sbjct: 185 DHGEAFLMLESGRAVAFMMDDALLYGEMAKARKPDDWTVVGTPQSYEIYGCMLRKDDPAF 244 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 V A + E+ ++ P Sbjct: 245 KKAVDGALTATFESGEIN---AIYDKWFLQPIPP 275 >gi|229089702|ref|ZP_04220963.1| hypothetical protein bcere0021_5460 [Bacillus cereus Rock3-42] gi|228693601|gb|EEL47303.1| hypothetical protein bcere0021_5460 [Bacillus cereus Rock3-42] Length = 273 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 59/278 (21%), Positives = 105/278 (37%), Gaps = 24/278 (8%) Query: 1 MYKDFFVSIL-CLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + + CL +L + + IKKRG L G+ F Sbjct: 1 MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 60 Query: 49 EVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 61 LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 120 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + + + GQ ++ K I S+ + G + G+T+ + Sbjct: 121 EERKKEVDF--SDVYFKAGQSLLVKKGSDIKSIDDVKKGVKVLAVKGSTSTNNIRQKSPE 178 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 179 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 231 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQ 263 A+ +G + ++ M E + +K I Q Sbjct: 232 GIAVQKGADDLTKEINSLIKDMKANGEYDKLYEKWIGQ 269 >gi|239620790|ref|ZP_04663821.1| ABC-type amino acid transport/signal transduction system [Bifidobacterium longum subsp. infantis CCUG 52486] gi|239516366|gb|EEQ56233.1| ABC-type amino acid transport/signal transduction system [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 300 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 61/259 (23%), Positives = 112/259 (43%), Gaps = 18/259 (6%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 +S + A L +IKK G +K + + F V +G ++G+DV F L+ + +P Sbjct: 47 SSANAKARSLDEIKKSGKIKIAVFSDKAPFGYVDKDGKYQGYDVYFAEQLAKDLGVEP-- 104 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 +Y ++ R L S ++D++ N T R+ + A G + + I Sbjct: 105 -EYTSVDPAARVDVLTSNKVDLVLANFTVTDERKEKVDFA--KPYMKVALGVVSPESAQI 161 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + VSQL G ++ + GTT E +F+ + +++ + A R DA++ D Sbjct: 162 TDVSQLDGKTLIIAKGTTAET----WFEKNAPNVKLQKYDQYADAYNALLDGRGDAFSTD 217 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI- 256 + + A +N V + + +APA+ +GDTE N V+ +V + Sbjct: 218 NTEVLAWAKSNK--GFKVGITHLGDDDTIAPAVQKGDTELLNFVND---EIVKLGKDNFF 272 Query: 257 ---TQKNINQVSKDTTNPD 272 Q+ + V + NPD Sbjct: 273 HKDYQETLEPVYGNEVNPD 291 >gi|330820727|ref|YP_004349589.1| extracellular solute-binding protein [Burkholderia gladioli BSR3] gi|327372722|gb|AEA64077.1| extracellular solute-binding protein [Burkholderia gladioli BSR3] Length = 273 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 63/263 (23%), Positives = 96/263 (36%), Gaps = 14/263 (5%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIF 72 +A L DIK+ G L+ F V A+ G DVD+ RAL+ + Sbjct: 16 FAALAPSLAHADRLDDIKQAGVLRVATFDSNPPFGYVDPASNHIVGLDVDYARALADKLG 75 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 K++ N R L S+++D++ N T R + + I YF + Sbjct: 76 ---VKLELQSTNPANRIPFLTSRKVDLVLANFTITDERAKQVDFS---IPYFSSGQQFLA 129 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 KK + S QL G I GTT E+ + + F + ++ AA RA Sbjct: 130 KKGVLKSKDQLDGLRIGADKGTTNEIAVREQFPKA----TVVAYDDTPFAFAALRAGNVQ 185 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 A T D L L ++ I P I+ + I +G+ V+ T E Sbjct: 186 AITQDGPKLVGLLANVPDKQKYEIPPFTITNDYMGVGIPKGEPRLVAFVNDTLKG---LE 242 Query: 253 ELGITQKNINQVSKDTTNPDVQR 275 G N+ TT + R Sbjct: 243 ANGTANTIYNRWFGPTTKTPLAR 265 >gi|55821555|ref|YP_139997.1| polar amino acid ABC uptake transporter substrate binding protein [Streptococcus thermophilus LMG 18311] gi|55737540|gb|AAV61182.1| polar amino acid ABC uptake transporter substrate binding protein [Streptococcus thermophilus LMG 18311] Length = 284 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 59/276 (21%), Positives = 107/276 (38%), Gaps = 23/276 (8%) Query: 2 YKDFFVSILCLIILFFTSF---------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 K F + L ++ T+ + A + +IKK G L+ + F V Sbjct: 5 KKIFALLALVFALVAVTACSSNSSSGKSTAKARTIEEIKKSGELRIAVFADKKPFGYVDN 64 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G ++G+D+ L+ + P +Y+ ++A R L S ++DI N T R+ Sbjct: 65 KGAYQGYDIGLGNRLAKDLGVKP---KYVSVDAANRAEFLISNKVDITLANFTVTDERKK 121 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + A G + K K I V +L G ++ V GTT E YF+ + Sbjct: 122 QVDFAL--PYMKVSIGVVSPKDKVIKDVKELEGKTLIVTKGTTAET----YFEKNYPNIK 175 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 +++ + A R DA++ D + + A L N V + + +APA+ + Sbjct: 176 LQKYDQYSDAYQALLDGRGDAFSTDNTEVLAWALENK--GYEVGITSLGDPDTIAPAVQK 233 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 G+ E + ++ E K+ + T Sbjct: 234 GNKELLDFINKDIK---KLGEENFFHKDYEKTLHPT 266 >gi|116050137|ref|YP_791046.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa UCBPP-PA14] gi|115585358|gb|ABJ11373.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa UCBPP-PA14] Length = 268 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 65/277 (23%), Positives = 104/277 (37%), Gaps = 17/277 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59 M K + + + L S A L DI+K G L+ F V A +G Sbjct: 1 MKK---LPAITALALALISGLAQADRLEDIRKAGVLRVASFDSNPPFGFVDAKSKQIEGL 57 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD+ +AL+ + ++Q LP N R L + ++D++ N T RE + + F Sbjct: 58 DVDYAKALADKLG---VRLQVLPTNPANRIPLLTANKVDLVLANFTIT--RERAQQVDFS 112 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ FI+ K ++S L+ + V GT E L + F I ++ Sbjct: 113 IPYFSSGQQFIVKKGT-LTSPEVLNKWRVGVDKGTVNEGVLREKFPGA----KVIAYDDT 167 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 A R + A T D L L ++ + P IS + I +G+ Sbjct: 168 PFAFTALRNGQVQAITQDGPKLIGLLANVPDRDKYEVPPFTISNDLIGVGIPKGEKSLTE 227 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRF 276 V + E+ G QK + T + R Sbjct: 228 FVDKSLR---ELEQDGQAQKIYDTWFGPQTKTPLARL 261 >gi|225860607|ref|YP_002742116.1| ABC transporter substrate-binding protein - glutamine transport/Major cell binding factor [Streptococcus pneumoniae Taiwan19F-14] gi|225727230|gb|ACO23081.1| ABC transporter substrate-binding protein - glutamine transport/Major cell binding factor [Streptococcus pneumoniae Taiwan19F-14] Length = 264 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 60/266 (22%), Positives = 109/266 (40%), Gaps = 16/266 (6%) Query: 1 MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVK-ANGDWK 57 M K FF+S L + + + A + DI+KRG L G+ + F G + Sbjct: 1 MKKKFFLSALLISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYS 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G + D + ++ + KI+Y+P+ A+ R L ++Q+D+ T R+ Sbjct: 61 GIETDLAKMVADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKLYNF- 116 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y D GF+++K I + L+G +I V G+ T+ + + K +K+ + Sbjct: 117 -TSPYYTDASGFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVELG 175 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E+ + AHR DA++ D S L +L D S + +TE+ Sbjct: 176 SYPELITSLHAHRIDAFSVDRSILSGYTSK-----RTALLDDSFKPSDYGIVTKKSNTEF 230 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQ 263 + + + G QK ++ Sbjct: 231 NDYLDNLVTKW---SKDGSLQKLYDR 253 >gi|324992111|gb|EGC24033.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK405] gi|324994205|gb|EGC26119.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK678] gi|327459422|gb|EGF05768.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK1] gi|327472830|gb|EGF18257.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK408] Length = 291 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 58/253 (22%), Positives = 103/253 (40%), Gaps = 14/253 (5%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 +S + A L +IKK G L+ + + F V NG ++G+D+ L+ + P Sbjct: 35 AASSKTVKARSLEEIKKSGKLRIAVFSDKKPFGYVDNNGKYQGYDIYLGDQLAKDLGVKP 94 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 +Y+P++A R L S ++DI N T R+ + A G + K Sbjct: 95 ---EYVPVDAANRAEYLISNKVDITLANFTVTDERKKQVDFAL--PYMKVSLGVVSPKGS 149 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I+ QL G ++ + GTT E YF+ + +++ + A R DA++ Sbjct: 150 VITKPEQLEGKTLIITKGTTAET----YFEKNYPNIKLQKYDQYSDAYQALLDGRGDAFS 205 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D + + A L N V + + +APA+ +G+TE N ++ + Sbjct: 206 TDNTEVLAWALENK--GFEVGITSLGDPDTIAPAVQKGNTELLNYINDEIK---KLGKEN 260 Query: 256 ITQKNINQVSKDT 268 K + T Sbjct: 261 FFHKAYEETLHPT 273 >gi|283833316|ref|ZP_06353057.1| extracellular solute-binding protein [Citrobacter youngae ATCC 29220] gi|291070954|gb|EFE09063.1| extracellular solute-binding protein [Citrobacter youngae ATCC 29220] Length = 277 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 62/276 (22%), Positives = 107/276 (38%), Gaps = 15/276 (5%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDV 61 K +++ L+ ++ A L DIK G +K F + A G+DV Sbjct: 10 KKTLLALSVLLASGISASQAQADQLADIKAAGVVKVATFDANPPFGSIDAKTHKIVGYDV 69 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 DF AL+ ++ K++ + N R LQS + D++ + T R + Sbjct: 70 DFAEALAKSLG---VKLELVATNPANRIPLLQSGKADLIVADITITPERAQVIDF--SVP 124 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + GQ F++ K + + S A I GTT E L F + + ++ + Sbjct: 125 YFVTGQQFLVPAKSPDK-LDEYSKARIGAVKGTTGEQALHQRFP----QSRVLAYDDIPL 179 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A R A T D + L L ++ ILPD++SK + + +G+ V Sbjct: 180 ALTALRNGNVQAITQDSTILAGLLGGAPDKADFKILPDLLSKEEIGVGVKKGEPALLKAV 239 Query: 242 SWTHYAMVTAEELGITQKNIN-QVSKDTTNPDVQRF 276 + ++ E G K + +T NP + F Sbjct: 240 ND---ELLKLESTGQAAKIYDVWFGPETKNPQPRTF 272 >gi|307126808|ref|YP_003878839.1| glutamine ABC transporter substrate-binding protein/Major cell binding factor [Streptococcus pneumoniae 670-6B] gi|306483870|gb|ADM90739.1| ABC transporter substrate-binding protein - glutamine transport/Major cell binding factor [Streptococcus pneumoniae 670-6B] Length = 269 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 65/278 (23%), Positives = 119/278 (42%), Gaps = 20/278 (7%) Query: 1 MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVK-ANGDWK 57 M K FF+S L + + + A + DI+KRG L G+ + F G + Sbjct: 1 MKKKFFLSALLISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYS 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G + D + ++ + KI+Y+P+ A+ R L ++Q+D+ T R+ Sbjct: 61 GIETDLAKMVADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKLYNF- 116 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y D GF+++K I + L+G +I V G+ T+ + + K +K+ + Sbjct: 117 -TSPYYTDASGFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVELG 175 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTND-------RPSEHVILPDIISKSPLAPAI 230 E+ + AHR DA++ D S L +PS++ I+ + L + Sbjct: 176 SYPELITSLHAHRIDAFSVDHSILSGYTSKRTALLDDSFKPSDYSIVTKKSNTE-LNDYL 234 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 T+W +V ++ VT+ + I Q+ +DT Sbjct: 235 DNLVTKWSRMVVCRNFMTVTSSNHLV----IPQIKEDT 268 >gi|113866501|ref|YP_724990.1| ABC transporter periplasmic protein [Ralstonia eutropha H16] gi|113525277|emb|CAJ91622.1| ABC-type transporter, periplasmic component: PAAT family [Ralstonia eutropha H16] Length = 299 Score = 197 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 46/257 (17%), Positives = 95/257 (36%), Gaps = 8/257 (3%) Query: 2 YKDFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + ++ ++ T+ + L IK G + G+ + F G+ Sbjct: 3 FAKLAALMIAGGVMCGTAQAAEQLTGTLKKIKDTGVITLGVRESSIPFNYNLGGVRQVGY 62 Query: 60 DVDFCRALSSAIFD----DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 D + AI D +++ +P+ ++ R LQ+ IDI +T L R+ +G Sbjct: 63 SYDINMKIVEAIKDQLKLPNLQVKEIPITSQNRITLLQNGTIDIECGSTTNNLERQKQVG 122 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + G ++ K GI + L G ++ AGTT+E L + + I Sbjct: 123 FTNSI--FIIGTRIMVKKDAGIKDWADLKGKNVVTTAGTTSERLLRKMNDDQKLGVNIIS 180 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + + R A+ D + LY + P++ +++ S+ I + D Sbjct: 181 TKDHGQSFLTLESGRAVAFMMDDALLYGERAKAKNPADWIVVGKPQSRESYGCMIRKDDP 240 Query: 236 EWYNIVSWTHYAMVTAE 252 ++ + M+ Sbjct: 241 QFKKLSDTVISGMMKDG 257 >gi|194397781|ref|YP_002037268.1| ABC transporter substrate-binding protein [Streptococcus pneumoniae G54] gi|194357448|gb|ACF55896.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae G54] Length = 264 Score = 197 bits (502), Expect = 2e-48, Method: Composition-based stats. Identities = 60/266 (22%), Positives = 108/266 (40%), Gaps = 16/266 (6%) Query: 1 MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVK-ANGDWK 57 M K FF+S L + + + A + DI+KRG L G+ + F G + Sbjct: 1 MKKKFFLSALLISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYS 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G + D + ++ + KI+Y+P+ A+ R L ++Q+D+ T R+ Sbjct: 61 GIETDLAKMVADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKLYNF- 116 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y D GF+++K I + L+G +I V G+ T+ + + K +K+ + Sbjct: 117 -TSPYYTDASGFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVELG 175 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E+ + AHR DA++ D S L +L D S + +TE Sbjct: 176 SYPELITSLHAHRIDAFSVDRSILSGYTSK-----RTELLDDSFKPSDYGIVTKKSNTEL 230 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQ 263 + + + G QK ++ Sbjct: 231 NDYLDNLVTKW---SKDGSLQKLYDR 253 >gi|190894703|ref|YP_001984996.1| putative amino acid ABC transporter substrate-binding protein [Rhizobium etli CIAT 652] gi|190700364|gb|ACE94446.1| probable amino acid ABC transporter, substrate-binding protein [Rhizobium etli CIAT 652] Length = 279 Score = 197 bits (502), Expect = 2e-48, Method: Composition-based stats. Identities = 62/276 (22%), Positives = 106/276 (38%), Gaps = 7/276 (2%) Query: 1 MYKDFFVSI--LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M F + L + L T + S L ++ RG L G + + A+ +G Sbjct: 1 MTISFRTGVMSLAVAALMSTPALADGSKLDEVLARGHLVLGTGSTNAPWHFKSADDKLQG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD ++ A+F DP KI+Y+ ++ R + + ++DI + T R + +AF Sbjct: 61 FDVDMGHIIAKALFGDPEKIEYVNQSSDARIPNITTDKVDITCQFMTVTGER--AQQVAF 118 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y +G G ++ + + L A + A + +E Sbjct: 119 TIPYYREGVGLMLKADGKYADYAALKAAGSSATISVLQNVYAETMVHAALPEATVDQYES 178 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 V+ I A + R DA D S+L P + + A A+ +GD +W Sbjct: 179 VDLIYQALESGRADAVATDQSSLAWYMTQ--NPGRYKDAGYGWNPQTYACAVKRGDQDWL 236 Query: 239 NIVSWTHYAMVTAEELGITQKNIN-QVSKDTTNPDV 273 N V+ + +T E K+ KD T P + Sbjct: 237 NFVNTALHEAMTGVEFDFYAKSFKTWFGKDLTPPQI 272 >gi|170751122|ref|YP_001757382.1| extracellular solute-binding protein [Methylobacterium radiotolerans JCM 2831] gi|170657644|gb|ACB26699.1| extracellular solute-binding protein family 3 [Methylobacterium radiotolerans JCM 2831] Length = 299 Score = 197 bits (502), Expect = 2e-48, Method: Composition-based stats. Identities = 54/270 (20%), Positives = 96/270 (35%), Gaps = 9/270 (3%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC- 64 + + L ++ L +K G + G V F+ + N GF +D C Sbjct: 9 IAATMTLALMTGAKADDLTGTLKKVKDTGTITLGYRESSVPFSYLDGNQKPVGFSIDVCG 68 Query: 65 ---RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 A+ + + K+ Y P+N+ R + + +D+ +T L+R+ + + Sbjct: 69 KVVEAVKTKLGMPDLKVAYTPVNSATRLPLVANGTVDLECGSTANQLVRQKQVAFSVS-- 126 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 T+ ++ GI++ L + V AGT T L + +K + E Sbjct: 127 TFVAQFKWLTRSDSGITTPDDLKSKMVAVTAGTNTSQFLNKLNQEDGLKLTIAQGKDHAE 186 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 R A+ D L LK PS IL S P A + D E+ +V Sbjct: 187 SFLLVETGRAAAFMEDDILLAGLKANAKDPSRFKILDKAYSADPYALMFRREDPEFKALV 246 Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNP 271 T ++ + E K + + P Sbjct: 247 DETLIGLMRSGE---FTKLYVKWFETPIPP 273 >gi|325524104|gb|EGD02268.1| extracellular solute-binding protein [Burkholderia sp. TJI49] Length = 298 Score = 197 bits (502), Expect = 2e-48, Method: Composition-based stats. Identities = 49/251 (19%), Positives = 87/251 (34%), Gaps = 9/251 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQY 80 L IK G + GI V F+ G+ D + + + ++ Sbjct: 27 GTLKKIKDTGVVSLGIRESSVPFSYSDNQQKNIGYSRDIAARIIEQLKTELNLPGLAVKE 86 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +P+ ++ R LQ+ ID +T TL R+ + Y G F K G+ Sbjct: 87 IPITSQNRIPLLQNGTIDFECGSTTNTLERQKQAAFSNSIFLY--GIRFSTRKDSGVKDF 144 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + L+G ++ AGT+ E L + M I + E R A+ D Sbjct: 145 ADLAGKTVATTAGTSDERLLRKLNEEKGMNMTIISAKDHAEAFMNVTTGRAVAFVMDEPL 204 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 LY + P + + + A + + D + ++V M T+ G +K Sbjct: 205 LYGEIAKDRNPGAYTVTGTPLVHENYACMMRRDDPAFKHVVDGVIAKMQTS---GDAEKL 261 Query: 261 INQVSKDTTNP 271 ++ P Sbjct: 262 YDRWFMQPIPP 272 >gi|167461572|ref|ZP_02326661.1| glutamine ABC transporter (glutamine-binding protein) [Paenibacillus larvae subsp. larvae BRL-230010] gi|322381527|ref|ZP_08055506.1| glutamine ABC transporter-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321154534|gb|EFX46831.1| glutamine ABC transporter-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 284 Score = 197 bits (502), Expect = 2e-48, Method: Composition-based stats. Identities = 54/249 (21%), Positives = 101/249 (40%), Gaps = 12/249 (4%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 + IK+RG L G+ F A+G+ G+DVDF +AL+ D +K++ Sbjct: 44 TAAGGTFQKIKERGKLIVGVKYDTNLFGLKDPASGEVTGYDVDFAKALAKKFLGDENKLE 103 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +N+K R L + +ID + + R+ + + + GQ ++ K I Sbjct: 104 LEEVNSKTRIPMLDNGEIDAIIATMTISEERKKQVDF--SDVYFKAGQSLLVKKGSPIKG 161 Query: 140 VSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + + G + G T+ + + + +E +E A +A + DA T D Sbjct: 162 IGDIRKGTKVLTAKGATSGKNIKE----KAEGVQVLEYENYQEAFNALKAGKGDALTTDN 217 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV-TAEELGIT 257 S LY + + ++ + + P A+ +G+ E+ V+ M E I Sbjct: 218 SILYGMVKQDPN---FEVVGEPFTDEPYGIAVKKGEAEFLKEVNGLLKEMQSNGEADKIY 274 Query: 258 QKNINQVSK 266 +K I + K Sbjct: 275 EKWIGEKPK 283 >gi|227530663|ref|ZP_03960712.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus vaginalis ATCC 49540] gi|227349444|gb|EEJ39735.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus vaginalis ATCC 49540] Length = 285 Score = 197 bits (502), Expect = 2e-48, Method: Composition-based stats. Identities = 63/245 (25%), Positives = 107/245 (43%), Gaps = 14/245 (5%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 IKKRG L+ + L + V +G G+DV+ R ++ + P +++ +NA R Sbjct: 46 IKKRGTLRVAVFGDLPPYGWVNKDGKRVGYDVELARRMAKDLGVKP---KFIQVNANNRV 102 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 L S + DI+ N T R+ + A G + KKK I+ VSQL G + Sbjct: 103 DTLNSNKADIVLANFTVTPERKKVVDFA--KPYMKVSVGVVSPKKKAITKVSQLKGKKVI 160 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V GTT E +YF + + F+ + A + +R A D S LYA Sbjct: 161 VTKGTTAE----NYFTSKQPGVQLLKFDSKTQQFNALKNNRAAALADDNSYLYAWVKN-- 214 Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 P V + I K ++PA+ +G+ ++++W++ + + K+ N K Sbjct: 215 NPKYTVGIKSIGPKQYISPAVKKGN---KSLLNWSNKEITKLNKEDFFTKDYNSQLKPYF 271 Query: 270 NPDVQ 274 +V+ Sbjct: 272 GSEVK 276 >gi|325697573|gb|EGD39458.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK160] Length = 291 Score = 197 bits (502), Expect = 2e-48, Method: Composition-based stats. Identities = 58/253 (22%), Positives = 103/253 (40%), Gaps = 14/253 (5%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 +S + A L +IKK G L+ + + F V NG ++G+D+ L+ + P Sbjct: 35 AASSKTVKARSLEEIKKSGKLRIAVFSDKKPFGYVDNNGKYQGYDIYLGDQLAKDLGVKP 94 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 +Y+P++A R L S ++DI N T R+ + A G + K Sbjct: 95 ---EYVPVDAANRAEYLISNKVDITLANFTVTDERKKQVDFAL--PYMKVSLGVVSPKGS 149 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I+ QL G ++ + GTT E YF+ + +++ + A R DA++ Sbjct: 150 VITKPEQLEGKTLIITKGTTAET----YFEKNYPNIKLQKYDQYSDAYQALLDGRGDAFS 205 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D + + A L N V + + +APA+ +G+TE N ++ + Sbjct: 206 TDNTEVLAWALENK--GFEVGITSLGDPDTIAPAVQKGNTELLNYINDEIK---KLGKEN 260 Query: 256 ITQKNINQVSKDT 268 K + T Sbjct: 261 FFHKAYEETLHPT 273 >gi|150018984|ref|YP_001311238.1| extracellular solute-binding protein [Clostridium beijerinckii NCIMB 8052] gi|149905449|gb|ABR36282.1| extracellular solute-binding protein, family 3 [Clostridium beijerinckii NCIMB 8052] Length = 270 Score = 197 bits (502), Expect = 2e-48, Method: Composition-based stats. Identities = 61/267 (22%), Positives = 103/267 (38%), Gaps = 20/267 (7%) Query: 1 MY-KDFFVSILCLIILFFTSFS-----------TNASILGDIKKRGFLKCGINTGLVGFA 48 M + F+++ + + S A + IK RG LK G+ + + Sbjct: 1 MKLRKLFLAVGLGVCMMMAGCSSSTPTNTGGNTAEAKEIQAIKDRGVLKVGVKVDVPKYG 60 Query: 49 EVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 G+ +G ++D +A++ I D SK+++ + AK R L + +ID+++ T Sbjct: 61 YKNPQTGEMEGLEIDLSKAIAKKILGDESKVEFQGVTAKTRGPLLDNGEIDMVAATFTIT 120 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 R+ S DG G ++ K G SS+ L G +I V TT+ L + Sbjct: 121 DERKKSYNF--SDPYIKDGVGLLVKKSLGASSLKDLDGKTIGVAQSATTKTALQKEAEKE 178 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 + E+ AA + R D + D S L VIL D Sbjct: 179 GITLKFSELGGYPELKAALDSGRIDCFAVDASILNGYV-----DDSTVILNDRYDPQEYG 233 Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEEL 254 A + +TE V+ M ++ EL Sbjct: 234 IATKKDNTELAKEVNEVINDMKSSGEL 260 >gi|225862618|ref|YP_002747996.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus 03BB102] gi|225788614|gb|ACO28831.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus 03BB102] Length = 276 Score = 197 bits (502), Expect = 2e-48, Method: Composition-based stats. Identities = 58/278 (20%), Positives = 107/278 (38%), Gaps = 24/278 (8%) Query: 1 MYKDFFVSIL-CLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + + CL +L + + IKKRG L G+ F Sbjct: 4 MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + + + GQ ++ K I ++ + G + G+T+ + Sbjct: 124 EERKKEVDF--SDVYFKAGQSLLVKKGSDIKNIDDVKKGVKVLAVKGSTSTNNIRQKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I ++ P Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTEEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQ 263 A+ +G + ++ M + E + +K I Q Sbjct: 235 GIAVQKGADDLTKEINSLIKDMKASGEYDKLYEKWIGQ 272 >gi|154686884|ref|YP_001422045.1| GlnH [Bacillus amyloliquefaciens FZB42] gi|154352735|gb|ABS74814.1| GlnH [Bacillus amyloliquefaciens FZB42] Length = 275 Score = 197 bits (502), Expect = 2e-48, Method: Composition-based stats. Identities = 58/272 (21%), Positives = 109/272 (40%), Gaps = 22/272 (8%) Query: 6 FVSILCLIILFFT--------SFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDW 56 +S+L + +L S T L IK R + G+ T F ++GD Sbjct: 12 LISLLAVFMLAACGGKETSGDSKGTGKDTLASIKDRDKIIFGVKTDTRLFGLKNPSSGDI 71 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +GFD+D + L+ I D K ++ + +K R LQ+ ID ++ T R+ + Sbjct: 72 EGFDIDISKQLAKDILGDEKKAEFKEVTSKTRIPMLQNGDIDAITATMTITDERKKEVDF 131 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + + GQ ++ K I S L G+ + G+T+ + + + + Sbjct: 132 --SDVYFEAGQSLLVKKGSSIKSTEDLGKGSKVLAVKGSTSSQNIREKAPDAS----VLE 185 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 FE E A +A + DA T D + LY + N ++ + + + P A+ +G + Sbjct: 186 FENYAEAFTALKAGQGDALTTDNAILYGMADENK---QYQLTGETFTDEPYGIAVKKGQS 242 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 ++ + M G +K + K+ Sbjct: 243 GLIKEINASLKKMKA---DGRYEKIYKKWIKE 271 >gi|218516825|ref|ZP_03513665.1| probable amino acid ABC transporter, substrate-binding protein [Rhizobium etli 8C-3] Length = 279 Score = 197 bits (502), Expect = 2e-48, Method: Composition-based stats. Identities = 62/276 (22%), Positives = 104/276 (37%), Gaps = 7/276 (2%) Query: 1 MYKDFFVSI--LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M F + L L T S L ++ RG L G + + A+ +G Sbjct: 1 MTISFRTGVISLVAAALLSTPVLAEGSKLDEVLARGHLVLGTGSTNAPWHFKSADDKLQG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD ++ A+F DP KI+Y+ ++ R + + ++DI + T R + +AF Sbjct: 61 FDVDMGHIIAKALFGDPEKIEYVNQSSDARIPNITTDKVDITCQFMTVTGER--AQQVAF 118 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y +G G ++ + + L A + A + +E Sbjct: 119 TIPYYREGVGLMLKADGKYADYAALKAAGSSATISVLQNVYAETMVHAALPEATVDQYES 178 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 V+ I A + R DA D S+L P + + A A+ +GD +W Sbjct: 179 VDLIYQALESGRADAVATDQSSLAWYMTQ--NPGRYKDAGYGWNPQTYACAVKRGDQDWL 236 Query: 239 NIVSWTHYAMVTAEELGITQKNIN-QVSKDTTNPDV 273 N V+ + +T E K+ KD T P + Sbjct: 237 NFVNTALHEAMTGVEFDFYAKSFKTWFGKDLTPPQI 272 >gi|152981667|ref|YP_001351969.1| solute-binding periplasmic protein of glutamate/aspartate ABC transporter [Janthinobacterium sp. Marseille] gi|151281744|gb|ABR90154.1| solute-binding periplasmic protein of glutamate/aspartate ABC transporter [Janthinobacterium sp. Marseille] Length = 300 Score = 197 bits (502), Expect = 2e-48, Method: Composition-based stats. Identities = 52/252 (20%), Positives = 99/252 (39%), Gaps = 7/252 (2%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 L L IK + G + F+ + G+ VD C + + D Sbjct: 20 LVTVQAQDLGGTLKKIKDTNSITIGYRESSIPFSFLDDKQQPIGYAVDLCMKIVDTVKAD 79 Query: 75 PS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130 K+ P+ + R L++ ID+ +T + +R+ + P + Sbjct: 80 LKLPNLKVVMQPVTSSNRIPLLRNGTIDLECGSTTNSKVRQEQVSF--GPNYFVINVTAA 137 Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190 + K I+S+ L+G +I +GTT+ L Y K N++ I + E R Sbjct: 138 VKKTSNINSLDDLNGKTISTTSGTTSVPLLKGYKKTENIQVKEIYGKDHAEAFLLMADDR 197 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 A+ D L + RP ++ ILP+ +S+ P + + + D ++ +V + A++ Sbjct: 198 AVAFVMDNILLAGQIANSKRPGDYKILPESLSQEPYSMMLRKDDPQFKALVDKSIGAVMK 257 Query: 251 AEELG-ITQKNI 261 + E+ I K Sbjct: 258 SGEINKIYAKWF 269 >gi|254302678|ref|ZP_04970036.1| ABC superfamily ATP binding cassette transporter binding protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148322870|gb|EDK88120.1| ABC superfamily ATP binding cassette transporter binding protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 292 Score = 197 bits (502), Expect = 2e-48, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 104/257 (40%), Gaps = 18/257 (7%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 + A + +IK G ++ G+ T F + NG +G+DV F L+ + K++ Sbjct: 41 TTAKARTVQEIKDSGVIRIGVFTDKAPFGYIDENGKNQGYDVYFTDRLAKDLG---VKVE 97 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 Y+ L+ R ++ + DI++ N T R + + G + K I S Sbjct: 98 YISLDPASRVEYAETAKADIVAANFTVTPERAEKVDFSL--PYMKVSLGVVSPDKAVIKS 155 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + +L ++ V GTT E YF ++ + ++ + A R DA++ D + Sbjct: 156 IDELKDKTLIVSKGTTAEY----YFSKNHPEIKLQKYDSYADAYNALLDGRGDAFSTDNT 211 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI--- 256 + A P V + + +A A+ +G+ +++ W + + + Sbjct: 212 EVLAWAKA--NPGFTVGIDSLGDVDTIAVAVQKGN---KDLLDWINNEIKELGKENFFHE 266 Query: 257 -TQKNINQVSKDTTNPD 272 + + + D+ +PD Sbjct: 267 AYKATLEPIYGDSADPD 283 >gi|34495575|ref|NP_899790.1| amino acid ABC transporter periplasmic amino acid-binding protein [Chromobacterium violaceum ATCC 12472] gi|34101430|gb|AAQ57799.1| probable amino acid ABC transporter, periplasmic amino acid-binding protein [Chromobacterium violaceum ATCC 12472] Length = 302 Score = 197 bits (502), Expect = 2e-48, Method: Composition-based stats. Identities = 43/248 (17%), Positives = 84/248 (33%), Gaps = 7/248 (2%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS-- 76 + L IK G + G + F+ N G+ VD + + + Sbjct: 25 GAAELTGTLKKIKDSGVIVLGNRDSSIPFSYYDNNQKPIGYSVDLANKVVDEVKKELKMP 84 Query: 77 --KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 +++Y + ++ R +Q+ +D+ +T R + + + G + K Sbjct: 85 NLQVRYNLVTSQTRIPLVQNGTVDLECGSTTNNAERGKQVAFSVGI--FEIGTRLLTAKT 142 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 G+ L G ++ AGTT+E + + NM + I + E + R A+ Sbjct: 143 SGVKDFPDLKGKNVVTTAGTTSERLIKAMNASKNMGMNVISAKDHGESFLMLESGRAAAF 202 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D + LY P V+ S + + D + +V + E+ Sbjct: 203 MMDDALLYGEMAKAKNPGNWVVTGKSQSYEIYGCMMRKDDPAFKKVVDTALEKTFKSGEV 262 Query: 255 G-ITQKNI 261 I K Sbjct: 263 NKIYAKWF 270 >gi|258645927|ref|ZP_05733396.1| CjaA protein [Dialister invisus DSM 15470] gi|260403296|gb|EEW96843.1| CjaA protein [Dialister invisus DSM 15470] Length = 289 Score = 197 bits (502), Expect = 2e-48, Method: Composition-based stats. Identities = 64/292 (21%), Positives = 112/292 (38%), Gaps = 34/292 (11%) Query: 1 MYKDF---FVSILCLIILFFTS-----------FSTNAS--ILGDIKKRGFLKCGINTGL 44 M K +I + + F + + AS + DIK+ G L G+ + Sbjct: 1 MLKKLSYILAAITLVCTMAFAAGCGSKNSDDKQAAQKASFRSIADIKQSGKLIIGVFSDK 60 Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 F + +G+++G+DV F L+ + K +Y+ L R ++ ++DI+ N Sbjct: 61 APFGYIDKDGNYQGYDVYFAERLAKDMG---VKAEYISLEPANRVEYAKTGKVDIVLANF 117 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164 T R + A G + KK I+S+ QL + V GTT E YF Sbjct: 118 TVTKERAEQVDFAL--PYMKVALGVVSPKKDNITSIDQLKDKLLIVAKGTTAET----YF 171 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 H+ + + F++ E A R A++ D + + A + P V + + Sbjct: 172 DKHHPEIKLLKFDQYTETFNALLDGRGAAFSTDNTEVLAWAM--KNPDFKVGITSLGDLD 229 Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN----QVSKDTTNPD 272 +APA+ +G+ E ++ + KN V NPD Sbjct: 230 TIAPAVQKGNKELLAYINDEIK---KLGKENFFHKNYEATLAPVYGSAVNPD 278 >gi|171059369|ref|YP_001791718.1| extracellular solute-binding protein [Leptothrix cholodnii SP-6] gi|170776814|gb|ACB34953.1| extracellular solute-binding protein family 3 [Leptothrix cholodnii SP-6] Length = 300 Score = 197 bits (502), Expect = 2e-48, Method: Composition-based stats. Identities = 53/279 (18%), Positives = 105/279 (37%), Gaps = 10/279 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ L L F T + L I+ G G+ A +G + GF Sbjct: 1 MKKTLMMAAL-LACAFVTGQARAEDTLKKIRDTGSATLGVRESSGALAYTLGDGKYVGFH 59 Query: 61 VDFCRAL----SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 + + + I+Y + ++ R +Q+ +D+ +T R+ + Sbjct: 60 TEMAERILGDIRKQLGLPKLDIKYQVVTSQNRIPLVQNGTVDLECGSTTNNAARQKDVAF 119 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 A TY + GI+ + QLSG ++ GTT+ TL + +A+ + + + Sbjct: 120 AV--TTYVEEVRIATKVNSGITGIGQLSGRAVATTTGTTSVQTLRRHERANGVDFKEVYG 177 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + R DA+ D L P ++ ++ +++S P+A + + D Sbjct: 178 KDHADSFLLLETGRADAFVMDGQILAGNISRAKNPPDYRLVGEVLSVEPIACVLRRDDPV 237 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 + V + M+ + EL K ++ P R Sbjct: 238 FKKAVDDSIVGMIRSGEL---AKLYDKWFMQPIPPSNTR 273 >gi|209547535|ref|YP_002279453.1| family 3 extracellular solute-binding protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538779|gb|ACI58713.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 279 Score = 197 bits (502), Expect = 2e-48, Method: Composition-based stats. Identities = 61/276 (22%), Positives = 103/276 (37%), Gaps = 7/276 (2%) Query: 1 MYKDFFVSI--LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M F + L L T + S L ++ RG L G + + A+ +G Sbjct: 1 MTISFRTGVMSLAAAALLSTPALADGSKLDEVLARGHLVLGTGSTNAPWHFKSADDKLQG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD ++ A+F DP KI+Y+ ++ R + + ++DI + T R + +AF Sbjct: 61 FDVDMGHIIAKALFGDPEKIEYVNQSSDARIPNITTDKVDITCQFMTVTGER--AQQVAF 118 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y +G G ++ + L A + A ++ Sbjct: 119 TIPYYREGVGLMLKADGKYGDYAALKAAGSSATISVLQNVYAETMVHAALPDATVDQYDS 178 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 V+ I A + R DA D S+L P + + A A+ +GD +W Sbjct: 179 VDLIYQALESGRADAVATDQSSLAWYMTQ--NPGRYKDAGYGWNPQTYACAVKRGDQDWL 236 Query: 239 NIVSWTHYAMVTAEELGITQKNIN-QVSKDTTNPDV 273 N V+ + +T E K+ KD T P + Sbjct: 237 NFVNTALHEAMTGVEFDFYAKSFKTWFGKDLTPPQI 272 >gi|167836674|ref|ZP_02463557.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia thailandensis MSMB43] Length = 271 Score = 197 bits (502), Expect = 2e-48, Method: Composition-based stats. Identities = 65/278 (23%), Positives = 101/278 (36%), Gaps = 14/278 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGF 59 M F + L + L + +A L DIKK G L+ F V G Sbjct: 1 MKLKPFATWLIGLSLVAAHAAAHADRLDDIKKSGVLRVATFDSNPPFGFVDRKTNRIVGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD+ +AL+ + +++ P N R L S ++D++ N T R + + Sbjct: 61 DVDYAQALADRLG---VRLKLQPTNPANRIPFLTSGKVDLVLANFTITDERAKQIDFS-- 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I YF + KK + S QL+G I GTT E+TL + F + ++ Sbjct: 116 -IPYFASGQQFLAKKGVLKSADQLNGLRIGADKGTTNEVTLREKFPKA----TIVAYDDT 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AA RA A T D L L + + IS + + +G+T Sbjct: 171 PFAFAALRAGNVQAITQDGPKLIGLLANVPDKQNYEVPAFSISNDYMGVGVPKGETRLVA 230 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277 V+ T E G + + T + R Sbjct: 231 FVNDTLT---NLEANGRAGRIYDAWFGPNTKTPLARIF 265 >gi|229817173|ref|ZP_04447455.1| hypothetical protein BIFANG_02432 [Bifidobacterium angulatum DSM 20098] gi|229784962|gb|EEP21076.1| hypothetical protein BIFANG_02432 [Bifidobacterium angulatum DSM 20098] Length = 298 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 60/257 (23%), Positives = 106/257 (41%), Gaps = 14/257 (5%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 S S A L +IKK G LK + + F V +G G+D+ F L+ + Sbjct: 44 TASSSAKARTLDEIKKSGELKVAVFSDKAPFGYVDKDGKNAGYDIVFAERLAKDLG---V 100 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 K++Y ++ R L S ++DI N T R+ + A G + + Sbjct: 101 KVKYTSVDPAARVDVLTSNKVDITLANFTVTDERKEKVDFA--KPYMKVALGVVSPENAE 158 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 I+ VSQL G ++ + GTT E YF+ + +++ + A R DA++ Sbjct: 159 ITDVSQLKGKTLIIAKGTTAET----YFEKNQPDVKLQKYDQYADAYNALLDGRGDAFST 214 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 D + + A +N V + + + +APA+ +G+ E +W + +V + Sbjct: 215 DNTEVLAWAKSNK--GFKVGITKLGDEDTIAPAVQKGNKELL---NWLNDEIVKLGKENF 269 Query: 257 TQKNINQVSKDTTNPDV 273 K+ + K DV Sbjct: 270 FHKDYEETLKPVYGSDV 286 >gi|170734967|ref|YP_001774081.1| extracellular solute-binding protein [Burkholderia cenocepacia MC0-3] gi|169821005|gb|ACA95586.1| extracellular solute-binding protein family 3 [Burkholderia cenocepacia MC0-3] Length = 313 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 51/240 (21%), Positives = 98/240 (40%), Gaps = 6/240 (2%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK- 77 + + L ++ G + G + F+ + A G+ ++ C+AL ++I D ++ Sbjct: 38 APAQLTGTLAKVRGSGTIALGYRDASIPFSYLNARNQPIGYSIELCKALVASIEDAINQS 97 Query: 78 --IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 I+++P+ + R A+ S ++D+ +T L R+ + PI + G ++ + Sbjct: 98 LTIRWVPVTSDNRIDAVVSGKVDLECGSTTSNLERQKRVAF--SPIFFVAGTKVMVKRGA 155 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I S L+G + V AGTT E L D + V + A DA+ Sbjct: 156 PIRSFRDLAGKKVAVTAGTTNEKALRDLNDKFRLGVQLQVVPDHAQGFALVANGGADAFA 215 Query: 196 GDISALYALKLTNDRP-SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D LY L N ++ ++ D +S P + D + +V T + E+ Sbjct: 216 TDDVLLYGLIAENASKGGQYDVVGDFLSYDPYGIMFRKDDPQLAQVVKTTFQELAADGEI 275 >gi|206560608|ref|YP_002231373.1| periplasmic glutamate/aspartate-binding protein [Burkholderia cenocepacia J2315] gi|198036650|emb|CAR52548.1| periplasmic glutamate/aspartate-binding protein [Burkholderia cenocepacia J2315] Length = 306 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 45/273 (16%), Positives = 96/273 (35%), Gaps = 9/273 (3%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + V+ L + + L I++ + G V F+ V A+G GF D Sbjct: 13 RSLLVAACVLACGASVAAEPLSGTLEKIRQANLISIGHRETSVPFSYVDASGKVIGFSQD 72 Query: 63 FCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 C + +A+ K ++++P+ ++ R +Q+ +D+ T R + Sbjct: 73 LCERVIAAVKARTGKPDLQVRFIPVTSQNRIPLVQNGTVDLECGVTTNLAARHAQVAF-- 130 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + + GI L+G ++ GTT+E L + M I + Sbjct: 131 STTFFVATTRLLTRTTSGIRDFPDLAGKTVVTNQGTTSERLLRKMNEEKKMNMQIISAKD 190 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E + R AY D L ++ +P++ ++ S + + D ++ Sbjct: 191 YGEGRLTLESGRAAAYMMDDVLLAGVRQLAAKPADWRLVGTPQSSEAYGFMLRKDDPQFK 250 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 +V ++ + E+ ++ P Sbjct: 251 ALVDGVLVQLMKSGEID---ALYDKWFMKPVPP 280 >gi|256847116|ref|ZP_05552562.1| ABC transporter solute-binding component [Lactobacillus coleohominis 101-4-CHN] gi|256715780|gb|EEU30755.1| ABC transporter solute-binding component [Lactobacillus coleohominis 101-4-CHN] Length = 284 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 71/283 (25%), Positives = 118/283 (41%), Gaps = 25/283 (8%) Query: 3 KDFFVSILCLIIL-----------FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK 51 K L I + + ++N S + IKKRG LK + L + V Sbjct: 6 KKLIAGALATISIAALAATAAVRPTTVNAASNPSSVSAIKKRGVLKVAVFGDLPPYGWVN 65 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 +G G+DV R ++ + K++++ +NA R L S + DI+ N T R+ Sbjct: 66 KDGKRVGYDVALARQMAKDLG---VKVKFVQVNANNRVDTLNSNKADIVLANFTVTSERK 122 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 + A G + KKK I+ VSQL G + V GTT E +YF + Sbjct: 123 QVVDFA--KPYMKVSVGVVSPKKKAITKVSQLKGKKVIVTKGTTAE----NYFTSKQKGV 176 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + F+ + A + +R A D S LYA P V + I K +APA+ Sbjct: 177 SLLKFDSKTQQFNALKNNRGAALADDNSYLYAWVKN--NPKYTVGIKSIGPKQYIAPAVK 234 Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 +G+ ++++W++ + + K+ N K + DV+ Sbjct: 235 KGN---KSLLNWSNQEITKLNKQDFFTKDYNNELKPYFSKDVK 274 >gi|107028647|ref|YP_625742.1| extracellular solute-binding protein [Burkholderia cenocepacia AU 1054] gi|116690194|ref|YP_835817.1| extracellular solute-binding protein [Burkholderia cenocepacia HI2424] gi|105897811|gb|ABF80769.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia AU 1054] gi|116648283|gb|ABK08924.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia HI2424] Length = 306 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 45/273 (16%), Positives = 95/273 (34%), Gaps = 9/273 (3%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + V+ L + A L +++ + G V F+ V A G GF D Sbjct: 13 RPLLVAACALACGASVAAEPLAGTLDKVRQSNLISIGHRETSVPFSYVDAGGKVIGFSQD 72 Query: 63 FCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 C + +A+ K ++++P+ ++ R +Q+ +D+ T R + Sbjct: 73 LCDRVIAAVKARTGKPDLQVRFIPVTSQNRIPLVQNGTVDLECGVTTNLAARHAQVAF-- 130 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + + GI L+G ++ GTT+E L + M I + Sbjct: 131 STTFFVATTRLLTRTTSGIRDFPDLAGKTVVTNQGTTSERLLRKMNEEKKMNMQIISAKD 190 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E + R AY D L ++ +P++ ++ S + + D ++ Sbjct: 191 YGEGRLTLESGRAAAYMMDDVLLAGVRQLAAKPADWQLVGTPQSSEAYGFMLRKDDPQFK 250 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 +V ++ + E+ ++ P Sbjct: 251 ALVDGVLVQLMKSGEIN---ALYDKWFMKPVPP 280 >gi|299067960|emb|CBJ39174.1| glutamate/aspartate transport protein; ABC superfamily, periplasmic binding component [Ralstonia solanacearum CMR15] Length = 298 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 47/270 (17%), Positives = 98/270 (36%), Gaps = 9/270 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M ++L I + ++ L IK G + G+ + F+ G Sbjct: 1 MNLAKLATVLAAIGVLSSAAHAQELTGTLKKIKDTGTITLGVRDSSIPFSYNVGGVRTIG 60 Query: 59 FDVDFCRALSSAIFD----DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + D + A+ + +++ +P+ ++ R LQ+ IDI +T L R+ Sbjct: 61 YSYDVATKVVEAVKEQLKLKDLQVKEIPVTSQNRITLLQNGTIDIECGSTTNNLERQKQA 120 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + G ++ K GI + L G ++ AGTT+E L + + I Sbjct: 121 SF--TNTIFIIGTRMMVKKDAGIKDWTDLKGKNVVTTAGTTSERLLRKMNDEKQLGMNII 178 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + + R A+ D + LY + P++ +++ S+ + + D Sbjct: 179 STKDHGQSFLTLESGRAVAFMMDDALLYGERAKARTPADWIVVGKPQSREAYGCMVRKDD 238 Query: 235 TEWYNIVSWTHYAMVTAEELGI-TQKNINQ 263 + + T M+ + +K Q Sbjct: 239 APFKTLADKTIVGMMKDGSINAEYKKWFEQ 268 >gi|188591216|ref|YP_001795816.1| glutamate/aspartate transporter; ABC superfamily, periplasmic binding component [Cupriavidus taiwanensis LMG 19424] gi|170938110|emb|CAP63096.1| glutamate/aspartate transport protein; ABC superfamily, periplasmic binding component [Cupriavidus taiwanensis LMG 19424] Length = 299 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 47/269 (17%), Positives = 98/269 (36%), Gaps = 9/269 (3%) Query: 2 YKDFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + ++ ++ T+ + L IK G + G+ + F G+ Sbjct: 3 FAKLAALMIAGGVMCGTAQAAEQLTGTLKKIKDTGVITLGVRESSIPFNYNLGGVRQVGY 62 Query: 60 DVDFCRALSSAIFD----DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 D + AI D +++ +P+ ++ R LQ+ IDI +T L R+ + Sbjct: 63 SYDINMKIVEAIKDQLKLPNLQVKEIPITSQNRITLLQNGTIDIECGSTTNNLERQKQVA 122 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + G ++ K GI + L G ++ AGTT+E L + + I Sbjct: 123 FTNSI--FIIGTRIMVKKDAGIKDWADLKGKNVVTTAGTTSERLLRKMNDDQKLGMNIIS 180 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + + R A+ D + LY + P++ +++ S+ I + D Sbjct: 181 TKDHGQSFLTLESGRAVAFMMDDALLYGERAKAKNPADWIVVGKPQSRESYGCMIRKDDP 240 Query: 236 EWYNIVSWTHYAMVTAEELG-ITQKNINQ 263 ++ + M+ + + K Q Sbjct: 241 QFKKLSDTVISGMMKDGSINTLYTKWFMQ 269 >gi|121602131|ref|YP_988959.1| putative glutamate/aspartate ABC transporter, permease protein/periplasmic glutamate/aspartate-binding protein [Bartonella bacilliformis KC583] gi|120614308|gb|ABM44909.1| putative glutamate/aspartate ABC transporter, permease protein/periplasmic glutamate/aspartate-binding protein [Bartonella bacilliformis KC583] Length = 460 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 59/267 (22%), Positives = 108/267 (40%), Gaps = 9/267 (3%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 +I ++ + L IK+ G + G+ G A NG + GF + + Sbjct: 167 AIRTILPPLTSVAHAQNDTLERIKQTGRITLGVRESS-GLAYALGNGRYTGFHTEMAENI 225 Query: 68 SSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 + I P +I+YLP+ ++ R LQ+ D +T R S+ A TY Sbjct: 226 INDISKKIGKPIRIRYLPITSQNRIPLLQNNTYDFECGSTTNDTARGRSVAFA--YTTYV 283 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 + + K GI S+ L+G +I GTT + +A N+ + I + Sbjct: 284 EEVRIAVKKDSGIKSIQDLNGKTIATTTGTTAVQLIRQNGRAKNINFRVINGRDHADSFL 343 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + R DA+ D S L + PS+++IL ++S P+A + D + ++ + Sbjct: 344 LLESGRADAFIMDSSILAGSISRSRNPSDYMILDAVLSVEPIACMLRLEDKNFEQAINDS 403 Query: 245 HYAMVTAEELGITQKNINQVSKDTTNP 271 + + + G +K N+ + P Sbjct: 404 IVSQI---KDGSLEKLYNKWFMEPIPP 427 >gi|160898239|ref|YP_001563821.1| extracellular solute-binding protein [Delftia acidovorans SPH-1] gi|160363823|gb|ABX35436.1| extracellular solute-binding protein family 3 [Delftia acidovorans SPH-1] Length = 305 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 43/254 (16%), Positives = 96/254 (37%), Gaps = 9/254 (3%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD----DPSK 77 ++ L I++ G + G GF+ + + G+ +D CR + I + Sbjct: 32 QDSGTLAKIQQAGAITLGYRESSFGFSYLDGDLKPVGYSMDICRRIVDEIKAQLKLPALQ 91 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++Y + + R + + +D+ +T + R+ + P + ++ G+ Sbjct: 92 VRYQAVTSANRIPLVANGTVDLECGSTTNLVERQKQVAF--SPDIFRYNVRMLVRADSGL 149 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 SV+ L G ++ AGTT+ L + + N+ + + + + R A+ D Sbjct: 150 RSVADLQGKTVATTAGTTSFRLLREADRGRNLDITNLSGKDHSDSFMLVESGRAQAFVLD 209 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 L P +++I + + A + + D + IV M+ + E+ Sbjct: 210 DILLAGQIANAKNPQDYLITGESLRTENQALMLRKDDAGFKAIVDRVVTGMMQSGEM--- 266 Query: 258 QKNINQVSKDTTNP 271 +K N+ P Sbjct: 267 EKLYNRWFMSPIPP 280 >gi|257093422|ref|YP_003167063.1| family 3 extracellular solute-binding protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045946|gb|ACV35134.1| extracellular solute-binding protein family 3 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 301 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 47/262 (17%), Positives = 91/262 (34%), Gaps = 10/262 (3%) Query: 15 LFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 + T+ + + L IK G + G + F+ G+ + AI Sbjct: 19 MSITALAQDLTGTLKKIKDTGAITLGHRESSIPFSYYDDKQQVIGYSQEMMLKAVDAIKA 78 Query: 74 D----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 + I+ +P+ ++ R +Q+ +D+ +T T R+ + + + G Sbjct: 79 ELKLAKLDIKLMPVTSENRITLVQNGSVDLECGSTTNTTERQKQVSFSNSI--FVVGTRM 136 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 + GI L+G ++ AGTT+E L + +NMK I + E Sbjct: 137 LTRSNSGIKDFPDLAGKTVVTTAGTTSERLLRKMNEDNNMKVKIISAKDHGESFLTLETG 196 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 R A+ D LY +E ++ S + + D +V ++ Sbjct: 197 RATAFVMDEVLLYGETAKAKNINEWAVVGTPQSYEAYGCMMRKDDPALKKVVDAALAKVM 256 Query: 250 TAEELGITQKNINQVSKDTTNP 271 T+ E +K + P Sbjct: 257 TSGE---AEKIYARWFLQPIPP 275 >gi|300692512|ref|YP_003753507.1| glutamate/aspartate transport protein; ABC superfamily, periplasmic binding component [Ralstonia solanacearum PSI07] gi|299079572|emb|CBJ52250.1| glutamate/aspartate transport protein; ABC superfamily, periplasmic binding component [Ralstonia solanacearum PSI07] Length = 298 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 45/270 (16%), Positives = 97/270 (35%), Gaps = 9/270 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M ++L + + ++ L IK G + G+ + F+ G Sbjct: 1 MNLAKLATVLAAVGVLSSAAHAQELTGTLKKIKDTGTITLGVRDSSIPFSYNVGGVRTIG 60 Query: 59 FDVDFCRALSSAIFD----DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + D + A+ D +++ +P+ ++ R LQ+ ID+ +T L R+ Sbjct: 61 YSYDIATKIVEAVKDQLKLKDLQVKEIPVTSQNRITLLQNGTIDLECGSTTNNLERQKQA 120 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + G ++ K GI + L G ++ AGTT+E L + + I Sbjct: 121 SF--TNTIFIIGTRMMVRKDSGIKDWADLKGKNVVTTAGTTSERLLRKMNDDKQLGMNII 178 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + + R A+ D + LY + ++ +++ S+ + + D Sbjct: 179 STKDHGQSFLTLESGRAVAFMMDDALLYGERAKAKTTADWIVVGKPQSREAYGCMVRKDD 238 Query: 235 TEWYNIVSWTHYAMVTAEELGI-TQKNINQ 263 + + T M+ + +K Q Sbjct: 239 APFKTLADKTITGMMKDGSINAEYKKWFEQ 268 >gi|241765003|ref|ZP_04762999.1| extracellular solute-binding protein family 3 [Acidovorax delafieldii 2AN] gi|241365400|gb|EER60193.1| extracellular solute-binding protein family 3 [Acidovorax delafieldii 2AN] Length = 298 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 51/275 (18%), Positives = 103/275 (37%), Gaps = 11/275 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + + L IK G + G+ G A NG + GF Sbjct: 1 MKKHIFAIAVAALAAGSAFAQA-GDTLAKIKSSGSVTLGVRESS-GLAYTLGNGKYVGFH 58 Query: 61 VDFCRAL----SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 + + + ++Y P+ ++ R + + +D+ +T R+ + Sbjct: 59 TEMGERILDDIQKQLGLAKLDVKYQPVTSQNRVPLVTNGTVDLECGSTTNNAARQKDVAF 118 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 A TY + + GI S+ L+G ++ GTT+ TL + +A + + ++ Sbjct: 119 AV--TTYVEEVRIAVKASSGIHSIKDLNGKTVATTTGTTSVQTLRKHERAGGIDFKEVLG 176 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + R DA+ D S L P+++ I+ +++S P+A + + D Sbjct: 177 KDHADSFLLLETGRADAFVMDGSILAGNISKAKNPADYKIVGEVLSVEPIACMMRKDDPA 236 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + V + + + G K ++ T P Sbjct: 237 FKKAVDDSIKRQI---KDGSLAKLYDKWFMQPTPP 268 >gi|23464704|ref|NP_695307.1| solute-binding protein for glutamate/aspartate ABC transporter system [Bifidobacterium longum NCC2705] gi|189438957|ref|YP_001954038.1| amino acid ABC transporter periplasmic protein [Bifidobacterium longum DJO10A] gi|322689597|ref|YP_004209331.1| amino acid ABC transporter substrate-binding protein [Bifidobacterium longum subsp. infantis 157F] gi|23325269|gb|AAN23943.1| probable solute-binding protein for glutamate/aspartate ABC transporter system [Bifidobacterium longum NCC2705] gi|189427392|gb|ACD97540.1| ABC-type amino acid transport system periplasmic component [Bifidobacterium longum DJO10A] gi|291516166|emb|CBK69782.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [Bifidobacterium longum subsp. longum F8] gi|320460933|dbj|BAJ71553.1| amino acid ABC transporter substrate binding component [Bifidobacterium longum subsp. infantis 157F] Length = 300 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 60/259 (23%), Positives = 112/259 (43%), Gaps = 18/259 (6%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 +S + A L +IKK G +K + + F V +G ++G+DV F L+ + +P Sbjct: 47 SSANAKARSLDEIKKSGKIKIAVFSDKAPFGYVDKDGKYQGYDVYFAEQLAKDLGVEP-- 104 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 +Y ++ R L S ++D++ N T R+ + A G + + I Sbjct: 105 -EYTSVDPAARVDVLTSNKVDLVLANFTVTDERKEKVDFA--KPYMKVALGVVSPESAQI 161 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + VSQL G ++ + GTT E +F+ + +++ + A R DA++ D Sbjct: 162 TDVSQLDGKTLIIAKGTTAET----WFEKNAPNVKLQKYDQYADAYNALLDGRGDAFSTD 217 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI- 256 + + A +N V + + +APA+ +G+TE N V+ +V + Sbjct: 218 NTEVLAWAKSNK--GFKVGITHLGDDDTIAPAVQKGNTELLNFVND---EIVKLGKDNFF 272 Query: 257 ---TQKNINQVSKDTTNPD 272 Q+ + V + NPD Sbjct: 273 HKDYQETLEPVYGNEVNPD 291 >gi|17546980|ref|NP_520382.1| putative amino-acid-binding periplasmic (PBP) ABC transporter protein [Ralstonia solanacearum GMI1000] gi|17429281|emb|CAD15968.1| putative amino-acid-binding periplasmic (pbp) abc transporter protein [Ralstonia solanacearum GMI1000] Length = 308 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 42/248 (16%), Positives = 91/248 (36%), Gaps = 8/248 (3%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS----SAIFD 73 + + + L IK+ G + G + F+ ++G+ G+ + + + Sbjct: 28 GAQAQSNDTLAKIKQSGVISVGYRESSIPFSYEASSGNITGYSQEISNLIVDGVKKKLGL 87 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 +++ P+ ++ R LQ+ ID +T L R+ + + Y G ++ K Sbjct: 88 SGLQVKLTPITSQNRIPLLQNGTIDFECGSTTNNLERQKQVAFSNNIFIY--GMLMLVKK 145 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM--KYHPIVFERVEEIDAAYRAHRC 191 GI L G ++ AGTT + L K + I+ + + + R Sbjct: 146 DAGIKDFPDLKGKTVVTTAGTTEDRILQKMNGEAKDADKMNLILAKDHGQAFLTLESGRA 205 Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 A+ D LY + ++ V++ + A + + D + + ++T+ Sbjct: 206 VAFVMDEPLLYGERTKAKNQNDWVVVGTPLQTETYACMMRKDDPAFKKVADDVIADLMTS 265 Query: 252 EELGITQK 259 G K Sbjct: 266 GRAGALYK 273 >gi|330505353|ref|YP_004382222.1| putative ABC transporter binding protein subunit [Pseudomonas mendocina NK-01] gi|328919639|gb|AEB60470.1| putative ABC transporter binding protein subunit [Pseudomonas mendocina NK-01] Length = 302 Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats. Identities = 48/266 (18%), Positives = 93/266 (34%), Gaps = 10/266 (3%) Query: 6 FVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVD 62 +S+ T L IK G + G + F+ N G+ D Sbjct: 7 VLSVAIAAAFLSTPVIAEELTGTLKKIKDSGTITLGHRDSSIPFSYFGDNSRQPIGYSHD 66 Query: 63 FCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 + AI + K++Y + ++ R +Q+ +D+ +T + R+ + + Sbjct: 67 LQLKVVEAIKQELSMPDLKVRYNLVTSQTRIPLVQNGTVDLECGSTTNNIERQQQVDFSV 126 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + G + K GI+ L G ++ AGTT+E + M + I + Sbjct: 127 GI--FEVGTRLLAKKSSGINDFDDLKGKNVVTTAGTTSERLIKAMNAEKKMGMNVISAKD 184 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E ++R A+ D + L +P + ++ S + +GD + Sbjct: 185 HGESFLMLESNRAVAFMMDDALLAGEMAKAKKPDDWAVVGTPQSFEIYGCMVRKGDAGFK 244 Query: 239 NIVSWTHYAMVTAEELG-ITQKNINQ 263 +V A + E+ I K Q Sbjct: 245 QVVDKAISATFASGEINDIYTKWFQQ 270 >gi|242241397|ref|YP_002989578.1| extracellular solute-binding protein family 3 [Dickeya dadantii Ech703] gi|242133454|gb|ACS87756.1| extracellular solute-binding protein family 3 [Dickeya dadantii Ech703] Length = 278 Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats. Identities = 66/273 (24%), Positives = 105/273 (38%), Gaps = 17/273 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59 M K F ++ L L F S + A L DI+K G +K + F V G+ Sbjct: 1 MKKQVF-ALTLLAGLVFLSGAAQADKLDDIQKAGVVKVAVFDSNPPFGYVDPQSKKLVGY 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD A+ A+ K++ N R L SK++D++S N T R + + Sbjct: 60 DVDVAEAIGKALG---VKVELRATNPANRIPLLTSKKVDLISANFTITDERAKQVNFSI- 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ FI K + + + I GT E+TL ++F + I ++ Sbjct: 116 -PYFATGQKFIARKGA-LKTPDDIKTLRIGADKGTVQEITLREHFPSA----KVISYDDT 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALK--LTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 AA R A T D + L L L D+ + I P I+K + +G+ Sbjct: 170 PLAFAALRNGNVQAITQDDAKLVGLLGNLPADQKAGFEISPFSITKEYQGIGVPKGEDRL 229 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 ++ + E+ G K N+ T Sbjct: 230 TQKINEVL---LNLEKQGDAVKIYNRWFGPDTK 259 >gi|325689405|gb|EGD31410.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK115] Length = 291 Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats. Identities = 57/253 (22%), Positives = 102/253 (40%), Gaps = 14/253 (5%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 +S + A L +IKK G L+ + + F V G ++G+D+ L+ + P Sbjct: 35 AASSKTVKARSLEEIKKSGKLRIAVFSDKKPFGYVDNKGKYQGYDIYLGDQLAKDLGVKP 94 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 +Y+P++A R L S ++DI N T R+ + A G + K Sbjct: 95 ---EYVPVDAANRAEYLISNKVDITLANFTVTDERKKQVDFAL--PYMKVSLGVVSPKGS 149 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I+ QL G ++ + GTT E YF+ + +++ + A R DA++ Sbjct: 150 VITKPEQLEGKTLIITKGTTAET----YFEKNYPNIKLQKYDQYSDAYQALLDGRGDAFS 205 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D + + A L N V + + +APA+ +G+TE N ++ + Sbjct: 206 TDNTEVLAWALENK--GFEVGITSLGDPDTIAPAVQKGNTELLNYINDEIK---KLGKEN 260 Query: 256 ITQKNINQVSKDT 268 K + T Sbjct: 261 FFHKAYEETLHPT 273 >gi|15891687|ref|NP_357359.1| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|15160141|gb|AAK90144.1| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 297 Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats. Identities = 59/270 (21%), Positives = 105/270 (38%), Gaps = 13/270 (4%) Query: 5 FFVSILCLIILFFTS-----FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 +S+ CL + F + L I K ++ G F+ NG+ GF Sbjct: 1 MRLSVFCLFLTCFAPVTPLQAADEGDTLQQIAKTAKIRIGYREAEPPFSYQLPNGEITGF 60 Query: 60 DVDFCRALSSAI----FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 D CRA+S I D +++Y+ RF+ ++S QIDI T R + Sbjct: 61 STDLCRAISEDIRSKLKLDKIELEYVKATPATRFILVRSGQIDIECAATTNNSERRKIVD 120 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F+ K+ + S++ L+G S+ +GT L +A N+ + Sbjct: 121 F--SYPNFMTATQFLSRKQDNLKSLADLAGRSVTSASGTVNIEQLNAVNRAKNLNISVMP 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS-KSPLAPAIIQGD 234 + EE A + A+ D L AL T++ P + + + +S P + D Sbjct: 179 TKTNEEAFDLVVAGKASAFVMDGILLAALAATSENPDLYALSEETLSAPEPYGLVFRRND 238 Query: 235 TEWYNIVSWTHYAMVTAEE-LGITQKNINQ 263 + V+ + M T+ G+ +K + Sbjct: 239 PAFKAAVNDSLRHMYTSSTIHGLYEKWFTK 268 >gi|299068342|emb|CBJ39566.1| glutamate/aspartate transport protein; ABC superfamily, periplasmic binding component [Ralstonia solanacearum CMR15] Length = 301 Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats. Identities = 45/264 (17%), Positives = 91/264 (34%), Gaps = 9/264 (3%) Query: 7 VSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 +++ I A L I+ + G+ + F+ + GF D C Sbjct: 10 LALAGAIAASVLPAQAEALDGTLKKIQDSNTILIGVRESSIPFSYRDSKNQIIGFSADLC 69 Query: 65 RALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 + A+ K +Q +P+ ++ R +Q+ +D+ T RE Sbjct: 70 TRVIDAVKQKVGKPDLQVQQIPVTSQNRTALVQNGSVDLECGVTTHLKSREQQTAF--ST 127 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + + G+ L+G S+ AGTT+E L M + I + Sbjct: 128 TFFIAATRLLTSVHSGVKDFPDLAGKSVITNAGTTSERILRKMNDEKKMSMNVISGKDYG 187 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E ++ R A+ D L + +P++ V+ S + + D ++ + Sbjct: 188 ESFLTLQSGRVQAFMMDDVLLAGARTLAQKPADWVVTGTPQSFEAYGFMLRRDDPQFKKL 247 Query: 241 VSWTHYAMVTAEELG-ITQKNINQ 263 V T ++ E+ + K + Sbjct: 248 VDDTLTGVMKRGEINALYAKWFEK 271 >gi|289168422|ref|YP_003446691.1| ABC-type amino acid transporter, substrate-binding protein [Streptococcus mitis B6] gi|288907989|emb|CBJ22829.1| ABC-type amino acid transporter, substrate-binding protein [Streptococcus mitis B6] Length = 264 Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats. Identities = 60/266 (22%), Positives = 109/266 (40%), Gaps = 16/266 (6%) Query: 1 MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVK-ANGDWK 57 M K FF+S L + + T+ A + DI+KRG L G+ + F G + Sbjct: 1 MKKKFFLSALLISLFGLTATKPVQADTSVADIQKRGELVVGVKQDVPNFGYKNPKTGTYS 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G + D + ++ + K++Y+P+ A+ R L ++Q+D+ T R+ Sbjct: 61 GIETDLAKMVADEL---KVKVRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKLYNF- 116 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y D GF+++K I + L+G +I V G+ T+ + + K +K+ + Sbjct: 117 -TSPYYTDASGFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVELG 175 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E+ + AHR DA++ D S L +L D S + +TE Sbjct: 176 SYPELITSLHAHRIDAFSVDRSILSGYTSK-----RTALLDDSFKPSDYGIVTKKSNTEL 230 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQ 263 + + + G QK ++ Sbjct: 231 NDYLDNLVTKW---SKDGSLQKLYDR 253 >gi|167562821|ref|ZP_02355737.1| extracellular solute-binding protein, family 3 [Burkholderia oklahomensis EO147] gi|167570001|ref|ZP_02362875.1| extracellular solute-binding protein, family 3 [Burkholderia oklahomensis C6786] Length = 271 Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats. Identities = 67/278 (24%), Positives = 100/278 (35%), Gaps = 14/278 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW-KGF 59 M + L L + +A L DIKK G L+ F V + G Sbjct: 1 MKLKPLATWLIGFSLVAAHAAAHADRLDDIKKAGVLRVATFDSNPPFGFVDPKTNRIVGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD+ +AL+ + K++ P N R L S ++D++ N T R + + Sbjct: 61 DVDYAQALADKLG---VKLKLQPTNPANRIPFLTSGKVDLVLANFTITDERAKQVDFS-- 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I YF + KK + S QLSG I GTT E+TL D + + ++ Sbjct: 116 -IPYFASGQQFLAKKGVLKSADQLSGLRIGADKGTTNEVTLRDKYPKA----TIVAYDDT 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AA RA A T D L L + I IS + + +G+T Sbjct: 171 PFAFAALRAGNVQAITQDGPKLIGLLANVPDKQNYEIPAFTISNDYMGVGVPKGETRLVA 230 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277 V T E G + + +T + R Sbjct: 231 FVDDTLKG---LEADGRAGRIYDAWFGPSTKTPLTRIF 265 >gi|257455526|ref|ZP_05620758.1| extracellular solute-binding protein, family 3 [Enhydrobacter aerosaccus SK60] gi|257447095|gb|EEV22106.1| extracellular solute-binding protein, family 3 [Enhydrobacter aerosaccus SK60] Length = 359 Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats. Identities = 49/285 (17%), Positives = 100/285 (35%), Gaps = 27/285 (9%) Query: 2 YKDFFVSILCLIILFFT-------------------SFSTNASILGDIKKRGFLKCGINT 42 K ++ + ++ L + +T L IKK G + G Sbjct: 6 KKPIALATVAIMALGLAGCNKASDNKAVGTEGSQPAAAATGEKTLDKIKKSGEIVLGYRD 65 Query: 43 GLVGFAEVKAN-GDWKGFDVDFCRALSSAIFD----DPSKIQYLPLNAKERFLALQSKQI 97 + F+ + G+ D + A+ K++Y + ++ R +Q+ + Sbjct: 66 SSIPFSYIAGTPNQPVGYAHDLQLKIVDAVKKQLNMPDLKVRYNLVTSQTRIPLVQNGTV 125 Query: 98 DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157 D+ +T R+ + + + G + K GI + L G ++ AGTT+E Sbjct: 126 DLECGSTTNNEERQKQVAFSNG--FFEIGTRLLTAKDSGIKDFADLKGKTLVTTAGTTSE 183 Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 + M + + + E + R A+ D L K P++ VI+ Sbjct: 184 RFIKKLNDDKKMGINIVSAKDHGESFLMLESGRAAAFMMDDVLLAGEKAKAKDPNKWVIV 243 Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQKNI 261 S + + D+E+ +V A ++ E+ I +K Sbjct: 244 GTPQSYEIYGCMMRKDDSEFKKVVDDALVATYSSGEINDIYKKWF 288 >gi|319791018|ref|YP_004152658.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] gi|315593481|gb|ADU34547.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] Length = 302 Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats. Identities = 54/270 (20%), Positives = 106/270 (39%), Gaps = 12/270 (4%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDP 75 + L IK G + G+ A + G + G+ V+ C + I + Sbjct: 23 TAQQAPTGGTLDKIKASGKVVLGVREASPPMAYMLGAGEKYVGYHVELCERVLKDITPN- 81 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 +K++Y+ + A+ +Q+ +DI T R+ + A TY Sbjct: 82 AKLEYMAVTAQNTIPLVQNGTLDIGCGPTTNNTARQQQVAFAL--TTYVSEVRMATRVDS 139 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 GI+++ QL+G ++ GTT L +A N+ Y+ ++ + E + R DA+ Sbjct: 140 GITTLDQLAGRNVSASTGTTAVQLLRKRERAQNVSYNTMLGKDHLESFLLMESGRADAFV 199 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL- 254 D + L + + P+ + I+ D + P+A + D + V + ++ + EL Sbjct: 200 LDDNLLAGIIANSKNPAAYRIVGDALGSEPIALLFRKDDPAFKTAVDESLRKLMKSGELE 259 Query: 255 GITQKNI-------NQVSKDTTNPDVQRFL 277 I K N +P +++ L Sbjct: 260 KIYTKWFVAAIPPKNTSLNLPMSPALKQLL 289 >gi|332107601|gb|EGJ08825.1| polar amino acid transporter substrate-binding protein [Rubrivivax benzoatilyticus JA2] Length = 270 Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats. Identities = 65/256 (25%), Positives = 98/256 (38%), Gaps = 14/256 (5%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 L DI+K G L+ F V A G DVD+ A + + K+Q +P Sbjct: 24 DRLADIQKAGVLRVAAFDANPPFGYVDAKTKKIVGLDVDYAEAFAKKLG---VKLQIVPT 80 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 N R L S ++D++ N T R +G + + G FI K + S QL Sbjct: 81 NPANRVPLLASNKVDLVFANFTITEERAKVVGFSI--PYFASGTQFIARKGT-LKSPEQL 137 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 SG I V GTT E+ L + + + ++ A R A + D L Sbjct: 138 SGLRIGVDKGTTNEIQLREKYPQA----TLVAYDDTPFAFTALRNGNVQAISQDGPKLIG 193 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 L ++ I P IS+ + I +G+T V+ T + E G QK + Sbjct: 194 LLANVPDRDKYEIPPFAISQDYIGVGIPKGETALTEFVNKTL---LELEADGRAQKIYDT 250 Query: 264 VSKDTTNPDVQRFLGI 279 TT ++R I Sbjct: 251 WFGPTTKTPLKRIFKI 266 >gi|312961374|ref|ZP_07775879.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas fluorescens WH6] gi|311285032|gb|EFQ63608.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas fluorescens WH6] Length = 282 Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats. Identities = 54/271 (19%), Positives = 102/271 (37%), Gaps = 5/271 (1%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 V + + S L + KRG L G + + A+G +GFD+D Sbjct: 9 KACVFLFAASASLAGTAQAADSKLDSVLKRGHLVVGTGSTNAPWHFQGADGKLQGFDIDI 68 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 R ++ +F+DPSK++++ ++ R L + ++D+ + T R + Y Sbjct: 69 GRIVAKGLFNDPSKVEFVVQSSDARIPNLLTDKVDMSCQFITVTASRAQQVAFTL--PYY 126 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 +G G ++ + L A V + + K ++ V+ + Sbjct: 127 REGVGLLLPNNSKYKEIEDLQAAGDGVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLMY 186 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 A + R DA D S++ L + P + S A A+ +GD +W N V+ Sbjct: 187 QAVNSGRADAAATDQSSVKYLMVQ--NPGRYRSPAYAWSPQTYACAVKRGDQDWLNFVNT 244 Query: 244 THYAMVTAEELGITQKNINQVSK-DTTNPDV 273 + +T E + + Q D P + Sbjct: 245 ALHEAMTGVEFPTYKASFKQWFGVDLPEPAI 275 >gi|312963583|ref|ZP_07778064.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas fluorescens WH6] gi|311282092|gb|EFQ60692.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas fluorescens WH6] Length = 300 Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats. Identities = 52/252 (20%), Positives = 95/252 (37%), Gaps = 8/252 (3%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAI----F 72 + + L I + G V F+ V ++G G+ VD + I Sbjct: 21 ANEAALDGTLSKIANAKSITLGYRDASVPFSYVGDSSGKPMGYSVDLASRIVERIQQKTG 80 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 +QY + ++ R +Q+ +D+ +T T R+ + ++ I Y GQ Sbjct: 81 VANLNVQYNLVTSQTRIPLVQNGTVDLECGSTGVTAERQKQVAFSYGFI-YVKGQLLTAR 139 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 GI + L G ++ AGTT E L Y H I + E R Sbjct: 140 -DSGIKGFADLEGKNVVTTAGTTNERFLKSYNAEHKANMFVISAKDHGEAFKMLETGRAV 198 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 A+ D + LY + P V++ + S+ + + + D ++ +V+ + + Sbjct: 199 AFYMDDALLYGERAKAKDPHHWVVVGEEQSREIYSCMVRKDDPQFLAVVNEALADLYRSG 258 Query: 253 EL-GITQKNINQ 263 E+ GI Q+ Q Sbjct: 259 EINGIYQRWFEQ 270 >gi|197295090|ref|YP_002153631.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315] gi|195944569|emb|CAR57173.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315] Length = 313 Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats. Identities = 53/240 (22%), Positives = 99/240 (41%), Gaps = 6/240 (2%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK- 77 + + L ++ G + G + F+ + A G+ ++ C+AL S+I D ++ Sbjct: 38 APAQLTGTLAKVRGSGTIALGYRDASIPFSYLNARNQPIGYSIELCKALVSSIEDAINRS 97 Query: 78 --IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 I+++P+ + R A+ S ++D+ +T L R+ + PI + G ++ + Sbjct: 98 LTIRWVPVTSDTRIDAVVSGKVDLECGSTTSNLERQKRVAF--SPIIFVAGTKVMVKRGA 155 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I S L+G + V AGTT E TL D + V + A DA+ Sbjct: 156 PIRSFRDLAGKKVAVTAGTTNEKTLRDLNDKFRLGIQLQVVPDHAQGFALVANGGADAFA 215 Query: 196 GDISALYALKLTNDRP-SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D LY L N ++ ++ D +S P + D + +V T + E+ Sbjct: 216 TDDVLLYGLIAENAGKGGQYDVVGDFLSYDPYGIMFRKDDPQLAQVVKTTFQELAADGEI 275 >gi|320546920|ref|ZP_08041222.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus equinus ATCC 9812] gi|320448438|gb|EFW89179.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus equinus ATCC 9812] Length = 290 Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats. Identities = 72/294 (24%), Positives = 118/294 (40%), Gaps = 36/294 (12%) Query: 1 MY--KDFFVSILCLIILFFTSFS----------------TNASILGDIKKRGFLKCGINT 42 M K F I L+I+F S A L IKK G +K G+ + Sbjct: 1 MKIVKRFLAIISLLLIVFAAGCSTSKSSTTKNSSSATSTAKARSLDAIKKSGTIKIGVFS 60 Query: 43 GLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102 F V G ++G+DV F L+ + K++Y+ ++ R L S ++DI+ Sbjct: 61 DKKPFGYVDDKGKYQGYDVYFANRLAKDLG---VKVKYVSVDPASRVEYLTSAKVDIILA 117 Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162 N T R + A G + + IS V L G ++ V GTT E Sbjct: 118 NFTVTDERAKQVDFAL--PYMKVALGVVSPSNQLISDVDALEGKTLIVGKGTTAET---- 171 Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222 YF+ H K + + F++ E A R DA + D + + A L N V + + Sbjct: 172 YFEKHYPKVNLLKFDQYSEAYQALLDGRGDALSTDNTEVLAWALENK--GYEVGIISLGD 229 Query: 223 KSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ----VSKDTTNPD 272 +APA+ +G+TE + W + + + + ++ ++ V D N D Sbjct: 230 TDTIAPAVQKGNTELLD---WINDEIKSLGDENFFHEDYDKTLAPVYGDAANAD 280 >gi|304405840|ref|ZP_07387498.1| extracellular solute-binding protein family 3 [Paenibacillus curdlanolyticus YK9] gi|304345083|gb|EFM10919.1| extracellular solute-binding protein family 3 [Paenibacillus curdlanolyticus YK9] Length = 283 Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats. Identities = 67/280 (23%), Positives = 115/280 (41%), Gaps = 17/280 (6%) Query: 1 MYKDF--FVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M K +SIL L L S S + + IKK ++ GI F A+ Sbjct: 1 MKKAIAGILSILLLAGLVGCSSSNDGKSAESGSIAAIKKADTIRIGIFADDAPFCYQDAD 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G +KG+DVD + ++ + D +KI ++ +N +R LQ+ + D++ + T R S Sbjct: 61 GTFKGYDVDLGKRIAKELLGDENKISWVVVNPADRIPYLQTDKADLMLADFTVTEERAKS 120 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + G + K I+SV L G ++ V GTT + YF + Sbjct: 121 VDFTL--PYEKVSLGVVSKDKAPINSVDDLKGKTLAVNTGTTADS----YFTKNYPDVKL 174 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + + + A R DA+ D + L + N+ V + ++ +K +A A+ QG Sbjct: 175 IKIDAITDGYQALITGRADAFAQDNTLLLSWAKKNE--GYTVGVKELGNKDYIAGAVKQG 232 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 + E + V+ + E K + K + DV Sbjct: 233 NKELLDYVNDLIKGKLKDEN--FFHKLYDTTLKASFPDDV 270 >gi|46190617|ref|ZP_00121269.2| COG0834: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Bifidobacterium longum DJO10A] Length = 280 Score = 196 bits (499), Expect = 4e-48, Method: Composition-based stats. Identities = 60/259 (23%), Positives = 112/259 (43%), Gaps = 18/259 (6%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 +S + A L +IKK G +K + + F V +G ++G+DV F L+ + +P Sbjct: 27 SSANAKARSLDEIKKSGKIKIAVFSDKAPFGYVDKDGKYQGYDVYFAEQLAKDLGVEP-- 84 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 +Y ++ R L S ++D++ N T R+ + A G + + I Sbjct: 85 -EYTSVDPAARVDVLTSNKVDLVLANFTVTDERKEKVDFA--KPYMKVALGVVSPESAQI 141 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + VSQL G ++ + GTT E +F+ + +++ + A R DA++ D Sbjct: 142 TDVSQLDGKTLIIAKGTTAET----WFEKNAPNVKLQKYDQYADAYNALLDGRGDAFSTD 197 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI- 256 + + A +N V + + +APA+ +G+TE N V+ +V + Sbjct: 198 NTEVLAWAKSNK--GFKVGITHLGDDDTIAPAVQKGNTELLNFVND---EIVKLGKDNFF 252 Query: 257 ---TQKNINQVSKDTTNPD 272 Q+ + V + NPD Sbjct: 253 HKDYQETLEPVYGNEVNPD 271 >gi|330966686|gb|EGH66946.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 304 Score = 196 bits (499), Expect = 4e-48, Method: Composition-based stats. Identities = 46/264 (17%), Positives = 92/264 (34%), Gaps = 9/264 (3%) Query: 5 FFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVD 62 + + ++ F+ L IK+ G + G + F+ + A+G G+ D Sbjct: 7 LLGAAIAATLISTPVFAAELTGTLKKIKESGTITLGHRDASIPFSYIADASGIPMGYSHD 66 Query: 63 FCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 + AI D K++Y + ++ R +Q+ +D+ +T + R+ + + Sbjct: 67 IQLKIVEAIKKDLDMPDLKVKYNLVTSQTRIPLVQNGTVDVECGSTTNNVERQQQVDFSI 126 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + G + K L G ++ AGTT+E L M + I + Sbjct: 127 GI--FEVGTRLLSKKDSSYKDFDDLKGKNVVTTAGTTSERILKAMNADKQMGMNVISAKD 184 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E + R A+ D + L +P + + S + +GD + Sbjct: 185 HGESFQMLESGRAVAFMMDDALLAGEMAKAKKPDDWAVTGTAQSYEIYGCMVRKGDAPFK 244 Query: 239 NIVSWTHYAMVTAEELG-ITQKNI 261 V A + ++ I K Sbjct: 245 KAVDDAIVATYKSGDINAIYSKWF 268 >gi|148998282|ref|ZP_01825751.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP11-BS70] gi|168576492|ref|ZP_02722366.1| ABC transporter substrate-binding protein - glutamine transport/Major cell binding factor [Streptococcus pneumoniae MLV-016] gi|307067225|ref|YP_003876191.1| amino acid ABC transporter/signal transduction system periplasmic domain-containing protein [Streptococcus pneumoniae AP200] gi|147755925|gb|EDK62969.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP11-BS70] gi|183577688|gb|EDT98216.1| ABC transporter substrate-binding protein - glutamine transport/Major cell binding factor [Streptococcus pneumoniae MLV-016] gi|306408762|gb|ADM84189.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain protein [Streptococcus pneumoniae AP200] Length = 264 Score = 196 bits (499), Expect = 4e-48, Method: Composition-based stats. Identities = 60/266 (22%), Positives = 108/266 (40%), Gaps = 16/266 (6%) Query: 1 MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVK-ANGDWK 57 M K FF+S L + + + A + DI+KRG L G+ + F G + Sbjct: 1 MKKKFFLSALLISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYS 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G + D + ++ + KI+Y+P+ A+ R L ++Q+D+ T R+ Sbjct: 61 GIETDLAKMVADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKLYNF- 116 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y D GF+++K I + L+G +I V G+ T+ + + K +K+ + Sbjct: 117 -TSPYYTDASGFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVELG 175 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E+ + AHR DA++ D S L +L D S + +TE Sbjct: 176 SYPELITSLHAHRIDAFSVDRSILSGYTNK-----RTALLDDSFKPSDYGIVTKKSNTEL 230 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQ 263 + + + G QK ++ Sbjct: 231 NDYLDNLVTKW---SKDGSLQKLYDR 253 >gi|149005718|ref|ZP_01829457.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP18-BS74] gi|225856308|ref|YP_002737819.1| ABC transporter substrate-binding protein - glutamine transport/Major cell binding factor [Streptococcus pneumoniae P1031] gi|303260101|ref|ZP_07346074.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP-BS293] gi|303261285|ref|ZP_07347233.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP14-BS292] gi|303263950|ref|ZP_07349871.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae BS397] gi|303265941|ref|ZP_07351837.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae BS457] gi|303268323|ref|ZP_07354120.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae BS458] gi|147762658|gb|EDK69618.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP18-BS74] gi|225724646|gb|ACO20498.1| ABC transporter substrate-binding protein - glutamine transport/Major cell binding factor [Streptococcus pneumoniae P1031] gi|302637419|gb|EFL67906.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP14-BS292] gi|302638796|gb|EFL69258.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP-BS293] gi|302642161|gb|EFL72511.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae BS458] gi|302644525|gb|EFL74776.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae BS457] gi|302646355|gb|EFL76581.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae BS397] Length = 264 Score = 196 bits (499), Expect = 4e-48, Method: Composition-based stats. Identities = 60/266 (22%), Positives = 109/266 (40%), Gaps = 16/266 (6%) Query: 1 MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWK 57 M K FF+S L + + + A + DI+KRG L G+ + F G + Sbjct: 1 MKKKFFLSALLISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYS 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G + D + ++ + KI+Y+P+ A+ R L ++Q+D+ T R+ Sbjct: 61 GIETDLAKMVADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKLYNF- 116 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y D GF+++K I + L+G +I V G+ T+ + + K +K+ + Sbjct: 117 -TSPYYTDASGFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVELG 175 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E+ + AHR DA++ D S L +L D S + + +TE Sbjct: 176 SYPELITSLHAHRIDAFSVDHSILSGYTSK-----RTALLDDSFKPSDYSIVTKKSNTEL 230 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQ 263 + + + G QK ++ Sbjct: 231 NDYLDNLVTKW---SKDGSLQKLYDR 253 >gi|83717385|ref|YP_438424.1| glutamate/aspartate ABC transporter periplasmic glutamate/aspartate-binding protein [Burkholderia thailandensis E264] gi|257141466|ref|ZP_05589728.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia thailandensis E264] gi|83651210|gb|ABC35274.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia thailandensis E264] Length = 299 Score = 196 bits (499), Expect = 4e-48, Method: Composition-based stats. Identities = 46/271 (16%), Positives = 91/271 (33%), Gaps = 10/271 (3%) Query: 1 MYKDF---FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K F + + + L I+ + G+ V F+ Sbjct: 1 MMKPFRPLLSIAVGCALAAAAHAEDASPTLKKIRDTSVVTLGVRESSVPFSYYDQRQQTI 60 Query: 58 GFDVDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ + + I + ++ ++ +P+ ++ R +Q+ +D+ +T T R Sbjct: 61 GYSQEIALKIVDEIKKELNRTNLTVREIPITSQNRIPLVQNGTVDLECGSTTHTKERANQ 120 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + + Y G I K G+ L+G ++ AGTT E L + M Sbjct: 121 VSFSNSIFQY--GMRLIAKKSSGVKDFPDLAGKTVATTAGTTEERLLRQWNAEKGMSMQI 178 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + + ++ R A+ D LY K P ++VI + + Sbjct: 179 ISAKDHADAFLNVKSGRAVAFFMDEPLLYGAKAKEANPGDYVITGSSPVSEAYGCMLRKD 238 Query: 234 DTEWYNIVSWTHYAMVTAEE-LGITQKNINQ 263 D + + M + E + K N+ Sbjct: 239 DPGFKQLADRVIARMQRSGEAEALYVKWFNR 269 >gi|300692905|ref|YP_003753900.1| glutamate/aspartate transport protein; ABC superfamily, periplasmic binding component [Ralstonia solanacearum PSI07] gi|299079965|emb|CBJ52642.1| glutamate/aspartate transport protein; ABC superfamily, periplasmic binding component [Ralstonia solanacearum PSI07] Length = 301 Score = 196 bits (499), Expect = 4e-48, Method: Composition-based stats. Identities = 44/264 (16%), Positives = 91/264 (34%), Gaps = 9/264 (3%) Query: 7 VSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 +++ I A L I+ + G+ + F+ + GF D C Sbjct: 10 IALAGAIAASVLPAQAEALDGTLKKIQDSNTILIGVREASIPFSYRDSKNQIIGFSADLC 69 Query: 65 RALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 + + K +Q +P+ ++ R +Q+ +D+ T RE Sbjct: 70 ARVIDVVKQKVGKPDLQVQQIPVTSQNRTALVQNGSVDLECGVTTHLKSREQQTAF--ST 127 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + + + G+ L+G S+ AGTT+E L M + I + Sbjct: 128 TFFIAATRLLTNVNSGVKDFPDLAGKSVITNAGTTSERILRKMNDEKKMNMNVISGKDYG 187 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E ++ R A+ D L + +P++ V+ S + + D ++ + Sbjct: 188 ESFLTLQSGRVQAFMMDDVLLAGARTLAQKPADWVVAGTPQSFEAYGFMLRRDDPQFKKL 247 Query: 241 VSWTHYAMVTAEELG-ITQKNINQ 263 V T ++ E+ + K + Sbjct: 248 VDDTLTGIMKRGEINTLYAKWFEK 271 >gi|253575034|ref|ZP_04852373.1| extracellular solute-binding protein, family 3 [Paenibacillus sp. oral taxon 786 str. D14] gi|251845490|gb|EES73499.1| extracellular solute-binding protein, family 3 [Paenibacillus sp. oral taxon 786 str. D14] Length = 284 Score = 196 bits (499), Expect = 4e-48, Method: Composition-based stats. Identities = 50/293 (17%), Positives = 117/293 (39%), Gaps = 35/293 (11%) Query: 1 MYKDFFV---SILCLIILFFTSFS--------------------TNASILGDIKKRGFLK 37 M K + + +++C + + S + L IK RG L Sbjct: 1 MKKRWRLISIAVVCALTVLAGCASNGAGGNTAGNGGNAAPATGESGTGALAKIKDRGKLV 60 Query: 38 CGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96 G+ F + G+ +GFD+D + ++ I D + ++ + +K R L + + Sbjct: 61 VGVKYDTKLFGLKDPSTGNVEGFDIDISKTIAKHILGDENALELKEVTSKTRIPMLNNGE 120 Query: 97 IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTT 155 ID++ T R+ + + + GQ ++ K I+ + L + +++ G+T Sbjct: 121 IDMIVATMTITEERKKEVDF--SDVYFQAGQSLLVKKGSPITGIESLTADSTVLGSKGST 178 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215 + + + + + F+ ++ A +A + DA T D + LY + + + Sbjct: 179 SVKNIREKVE----GIKVLEFDNYQDAFNALKAGQGDALTTDDAILYGMAAQDPN---YE 231 Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSKD 267 ++ + P A+ +G+++ ++ T + + E I +K I + + Sbjct: 232 VVGKPFTDEPYGIAVQKGNSDIVQAINDTLKELHDSGEYDKIYEKWIGKKPGE 284 >gi|51245088|ref|YP_064972.1| glutamine ABC transporter, periplasmic substrate binding protein [Desulfotalea psychrophila LSv54] gi|50876125|emb|CAG35965.1| probable glutamine ABC transporter, periplasmic substrate binding protein [Desulfotalea psychrophila LSv54] Length = 271 Score = 196 bits (498), Expect = 4e-48, Method: Composition-based stats. Identities = 52/267 (19%), Positives = 105/267 (39%), Gaps = 12/267 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M ++ + ++ + + I+K L+ GI + A +W GFD Sbjct: 1 MRLKSIIAGAVISVMVSGVVAFAGPVWDKIQKSKTLRAGIMNNSIPGAYYNDKKEWVGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + ++ + K++ + + K R LQ +ID+ N RE + F Sbjct: 61 VDMAKEIAKRLG---LKLEQVLVTDKTRIGFLQQGRIDMSIANMTH--KRERDKSIDFSI 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +FDGQ + K K + + L G +I GTT+E+ + K + ++ Sbjct: 116 TYFFDGQKMLTRKGK-YADWNALVGKTIATVQGTTSEINVKTLMKKMGGA-EIVSYQDYP 173 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A + R A++ D + L P ++ ++ D S+ P + Q +++ + Sbjct: 174 SAFNALQMGRVQAFSTDSTILLGYAAQ--EPGKYELVGDFFSREPYGIGLPQDESQLRDA 231 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKD 267 V+ +A+ + G N+ + Sbjct: 232 VN---FALQDMWKDGTYMAIYNKWYGE 255 >gi|300690821|ref|YP_003751816.1| glutamate/aspartate ABC transporter,periplasmic binding subunit [Ralstonia solanacearum PSI07] gi|299077881|emb|CBJ50520.1| glutamate/aspartate ABC transporter,periplasmic binding subunit [Ralstonia solanacearum PSI07] Length = 308 Score = 196 bits (498), Expect = 4e-48, Method: Composition-based stats. Identities = 40/262 (15%), Positives = 92/262 (35%), Gaps = 11/262 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS----SAI 71 + + + L I++ G + G + F+ ++G+ G+ + + + Sbjct: 26 STGAQAQSNDTLAKIRQSGVISVGYRESSIPFSYEASSGNITGYSQEISNLIIDGVKKKL 85 Query: 72 FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131 +++ P+ ++ R LQ+ ID +T L R+ + + Y G ++ Sbjct: 86 GLPSLQVKLTPITSQNRIPLLQNGTIDFECGSTTNNLERQKQVAFSNNIFIY--GMLMLV 143 Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM--KYHPIVFERVEEIDAAYRAH 189 K GI L G ++ AGTT + L K + I+ + + + Sbjct: 144 KKDGGIKDFPDLKGKTVVTTAGTTEDRILQKMNGEAKDADKMNLILAKDHGQAFLTLESG 203 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 R A+ D LY + + +++ + A + + D + + ++ Sbjct: 204 RAVAFVMDEPLLYGERTKAKNQDDWIVVGKPLQTETYACMMRKDDPAFKKVADDVIADLM 263 Query: 250 TAEELGITQKNINQVSKDTTNP 271 T+ G + + P Sbjct: 264 TS---GRANALYKKWFQSPIPP 282 >gi|257486609|ref|ZP_05640650.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|320325614|gb|EFW81676.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. glycinea str. B076] gi|320327102|gb|EFW83116.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330989515|gb|EGH87618.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. lachrymans str. M301315] gi|331010092|gb|EGH90148.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 304 Score = 196 bits (498), Expect = 4e-48, Method: Composition-based stats. Identities = 47/264 (17%), Positives = 90/264 (34%), Gaps = 10/264 (3%) Query: 6 FVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVD 62 + + L T L IK+ G + G + F+ + A+G G+ D Sbjct: 7 LLGVAITAALISTPVFAAELTGTLKKIKESGTITLGHRDASIPFSYIADASGVPMGYSHD 66 Query: 63 FCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 + AI D K++Y + ++ R +Q+ +D+ +T + R+ + + Sbjct: 67 IQLKIVEAIKKDLDMPDLKVKYNLVTSQTRIPLVQNGTVDVECGSTTNNVERQQQVDFSI 126 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + G + K L G ++ AGTT+E L M + I + Sbjct: 127 GI--FEVGTRLLSKKDSSYKDFDDLKGKNVVTTAGTTSERILKAMNADKQMGMNVISAKD 184 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E + R A+ D + L +P + + S + +GD + Sbjct: 185 HGESFQMLESGRAVAFMMDDALLAGEMAKAKKPDDWAVTGTAQSYEIYGCMVRKGDAPFK 244 Query: 239 NIVSWTHYAMVTAEELG-ITQKNI 261 V A + ++ I K Sbjct: 245 KAVDDAIVATYKSGDINAIYSKWF 268 >gi|171778294|ref|ZP_02919500.1| hypothetical protein STRINF_00342 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171282994|gb|EDT48418.1| hypothetical protein STRINF_00342 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 290 Score = 196 bits (498), Expect = 5e-48, Method: Composition-based stats. Identities = 66/284 (23%), Positives = 114/284 (40%), Gaps = 32/284 (11%) Query: 1 MY--KDFFVSILCLIILFFTSFS----------------TNASILGDIKKRGFLKCGINT 42 M K F + L+I+F S A L IKK G +K G+ + Sbjct: 1 MKIVKRFLAIVSLLLIVFAAGCSTSKSSTTKNSSSATSTAKARSLDAIKKSGTIKIGVFS 60 Query: 43 GLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102 F V G ++G+D+ F L+ + K++Y+ ++ R L S ++DI+ Sbjct: 61 DKKPFGYVDDKGKYQGYDIYFANRLAKDLG---VKVKYVSVDPASRVEYLTSAKVDIILA 117 Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162 N T R + A G + + IS V L G ++ V GTT E Sbjct: 118 NFTVTDERAKQVDFAL--PYMKVALGVVSPSNQLISDVDALEGKTLIVGKGTTAET---- 171 Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222 YF+ H K + + F++ E A R DA + D + + A L N V + + Sbjct: 172 YFEKHYPKVNLLKFDQYSEAYQALLDGRGDALSTDNTEVLAWALENK--GYKVGITSLGD 229 Query: 223 KSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 +APA+ +G+TE + W + + + + ++ ++ Sbjct: 230 TDTIAPAVQKGNTELLD---WINDEIKSLGDENFFHEDYDKTLA 270 >gi|313106334|ref|ZP_07792576.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa 39016] gi|310879078|gb|EFQ37672.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa 39016] Length = 349 Score = 196 bits (498), Expect = 5e-48, Method: Composition-based stats. Identities = 50/283 (17%), Positives = 95/283 (33%), Gaps = 18/283 (6%) Query: 2 YKDF------FVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKAN 53 K F +S + L + L IK G + G + F+ + Sbjct: 44 RKKFMRIAPSLLSTAIVAALLSAPVVADELTGTLKKIKDTGTITLGHRDASIPFSYLGTE 103 Query: 54 -GDWKGFDVDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 G G+ D + A+ + + K++Y + ++ R +Q+ +DI +T Sbjct: 104 PGKPIGYSHDLQLKVVEAVKKELNLPDLKVRYNLVTSQTRIPLVQNGTVDIECGSTTNNE 163 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168 R+ + + + G + K I L G ++ AGTT+E L Sbjct: 164 ERQKQVDFSVGI--FEVGTRLLSKKTANIKDFDDLKGKNVVTTAGTTSERLLKAMNADKK 221 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 M + I + E + R A+ D + LY +P + V+ S Sbjct: 222 MGMNIISAKDHGESFMMLESGRAVAFMMDDALLYGEMAKAKKPDDWVVGGTPQSFEIYGC 281 Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + +GD + +V + E+ K ++ P Sbjct: 282 MVRKGDAAFKKVVDKAITDTYASGEVN---KIYDKWFTQPIPP 321 >gi|107101631|ref|ZP_01365549.1| hypothetical protein PaerPA_01002675 [Pseudomonas aeruginosa PACS2] Length = 268 Score = 196 bits (498), Expect = 5e-48, Method: Composition-based stats. Identities = 63/277 (22%), Positives = 102/277 (36%), Gaps = 17/277 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59 M K + + + L S A L DI+K G L+ F V A +G Sbjct: 1 MKK---LPAITALALALISGLAQADRLEDIRKAGVLRVASFDSNPPFGFVDAKSKQIEGL 57 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD+ +AL+ + ++Q LP N R L + ++D++ N T R + + Sbjct: 58 DVDYAKALADKLG---VRLQVLPTNPANRIPLLTANKVDLVLANFTITPERAQQVDFSI- 113 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ FI+ K ++S L+ + V GT E L + F I ++ Sbjct: 114 -PYFSSGQQFIVKKGT-LTSPEVLNKWRVGVDKGTVNEGVLREKFPGA----KVIAYDDT 167 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 A R + A T D L L ++ + P IS + I +G+ Sbjct: 168 PFAFTALRNGQVQAITQDGPKLIGLLANVPDRDKYEVPPFTISNDLIGVGIPKGEKSLTE 227 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRF 276 V + E+ G QK + T + R Sbjct: 228 FVDKSLR---ELEQDGQAQKIYDTWFGPQTKTPLARL 261 >gi|322386066|ref|ZP_08059705.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus cristatus ATCC 51100] gi|321269910|gb|EFX52831.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus cristatus ATCC 51100] Length = 288 Score = 196 bits (498), Expect = 5e-48, Method: Composition-based stats. Identities = 60/286 (20%), Positives = 114/286 (39%), Gaps = 25/286 (8%) Query: 1 MYKDFFVSILCLIILFFTS-------------FSTNASILGDIKKRGFLKCGINTGLVGF 47 + V L ++F T+ + A + +IKK G L+ + F Sbjct: 4 LKSLLTVFALAFALIFVTACGSGGNATSSSGKTTAKARTIDEIKKSGELRIAVFGDKKPF 63 Query: 48 AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 V +G ++G+D++ L+ + K +Y+ ++A R L S ++DI N T Sbjct: 64 GYVDNDGSYQGYDIELGNQLAKDLG---VKAKYVSVDAANRAEYLISNKVDITLANFTVT 120 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 R+ + A G + KK I+ V QL G ++ V GTT E YF+ + Sbjct: 121 DERKKQVDFAL--PYMKVSLGVVSPKKGVITDVKQLEGKTLIVTKGTTAET----YFEKN 174 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 + + +++ + A R DA++ D + + A L N V + + +A Sbjct: 175 HPEVKLQKYDQYSDAYQALLDGRGDAFSTDNTEVLAWALENK--GYEVGISSLGDPDTIA 232 Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSKDTTNPD 272 PA+ +G+ E + ++ + +K ++ D D Sbjct: 233 PAVQKGNKELLDFINKDIEKLGKENFFHKAYEKTLHPTYGDAAKAD 278 >gi|241664891|ref|YP_002983251.1| family 3 extracellular solute-binding protein [Ralstonia pickettii 12D] gi|240866918|gb|ACS64579.1| extracellular solute-binding protein family 3 [Ralstonia pickettii 12D] Length = 298 Score = 196 bits (498), Expect = 5e-48, Method: Composition-based stats. Identities = 51/260 (19%), Positives = 102/260 (39%), Gaps = 10/260 (3%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 + T + +L I+ G ++ V F+ V G G+ +D C L A+ Sbjct: 20 ALALPTTSPVLDRIRDTGAVRLAYRENSVPFSYVDG-GKPVGYSIDLCSRLVEALKVAVK 78 Query: 77 K----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 + IQY+P+ R A+ + D+ +T+ T RE +AF Y ++ Sbjct: 79 RADLNIQYVPVTPATRIAAITEGKADLECGSTNNT--RERREKVAFTIPHYIASSRMLVK 136 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 GI L+ ++ G+T + A +K + + E A + D Sbjct: 137 TSSGIHRWEDLNNKTVVSTRGSTNGGQIRAMADARVLKVNVVEARDHTEAFGLVVAGKAD 196 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 A+ D LY + T+ P+++ ++ ++ +P A + + D E+ ++ M+ Sbjct: 197 AFAMDDVLLYGFRATSPNPADYTVVGSNLAVAPYAIMLSKDDPEFKKVIDLAMSRMILDG 256 Query: 253 ELGITQKNINQVSKDTTNPD 272 E +K + + P+ Sbjct: 257 E---AEKLYKKWFQQPIPPN 273 >gi|255318803|ref|ZP_05360029.1| glutamate/aspartate periplasmic-binding protein [Acinetobacter radioresistens SK82] gi|255304059|gb|EET83250.1| glutamate/aspartate periplasmic-binding protein [Acinetobacter radioresistens SK82] Length = 320 Score = 196 bits (498), Expect = 5e-48, Method: Composition-based stats. Identities = 44/251 (17%), Positives = 91/251 (36%), Gaps = 9/251 (3%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIF----D 73 + S + L I++ G + G + F+ + G+ D + A+ Sbjct: 44 TGSAGSGTLEKIRQSGTVVLGHRDSSIPFSYIADNPNQPVGYAHDLQMKVVEALKQKLNK 103 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 K++Y + ++ R + + +D+ +T R+ + + + G + K Sbjct: 104 PDLKVRYNLVTSQNRIPLVSNGTVDLECGSTTNNKERQQQVDFSVG--FFQVGSRLLTAK 161 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 GI S L G + AGTT+E + + + + I + + + R A Sbjct: 162 DSGIKDFSDLKGKKVVTTAGTTSERYIRQHAQELGIG-EVISAKDHADSFLMLQNGRAAA 220 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 + D L K P + VI+ + + +GD E+ +V A + E Sbjct: 221 FMMDDILLAGEKSKAKEPDKWVIVGTPPIQEVYGCMLRKGDKEFKQVVDDAIKATYASGE 280 Query: 254 LG-ITQKNINQ 263 + + +K Q Sbjct: 281 INDMYKKWFQQ 291 >gi|323467048|gb|ADX70735.1| Glutamine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus helveticus H10] Length = 272 Score = 196 bits (498), Expect = 5e-48, Method: Composition-based stats. Identities = 54/279 (19%), Positives = 108/279 (38%), Gaps = 17/279 (6%) Query: 1 MYKDFFVSILCLIILFFT----SFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55 M K FF+S L + I FT S + ++ +K + G+ F + G Sbjct: 1 MKKRFFLSTLLIGITLFTLSACSQNKKQNVYQTVKSTKTINWGVKADTPLFGSMNIKTGK 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GF++D +AL+ + +K ++ A + L+++ +D + T RE + Sbjct: 61 INGFEIDLAKALTKEMLGKNAKANFVTTTANTKIQLLKNRNVDAVIAAMTITPEREKQVD 120 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + GQ ++ K I +V L+ + V GTT + + + Sbjct: 121 F--SKPYFPAGQSIMVAKNSKIKNVKDLNNKKVLVVKGTTAADAVKKFAPKA----EILQ 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F+ + AA +A + DA+ D L + S + ++ + P A+ +G T Sbjct: 175 FDDYGQAFAALKAGQGDAFVTDNGILVGI---LRDSSGYKLVGGNFTNQPYGIAVNKGQT 231 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 E + A+ E+ G + + + + +V+ Sbjct: 232 EMD---KQINLALTKLEKDGTYNRLLKKWFGNIPGFNVK 267 >gi|224825939|ref|ZP_03699043.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum 2002] gi|224602163|gb|EEG08342.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum 2002] Length = 297 Score = 196 bits (498), Expect = 5e-48, Method: Composition-based stats. Identities = 47/269 (17%), Positives = 94/269 (34%), Gaps = 8/269 (2%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + L L T + AS L + + V F+ + + GF Sbjct: 1 MKTKKLMTTALIATGLACTLPAVAASTLEKVAASNKITVSYREAAVPFSYLPGSDKAVGF 60 Query: 60 DVDFCRALSSAIFDDPSKIQY----LPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 VD A+ + K +P+ ++ R L D+ +T R + Sbjct: 61 SVDLTNAIVDDVRKKLKKPNLEVAAIPVTSQNRIPLLVDGTYDLECGSTTNNAARGKDVA 120 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 A ++ G + K I+S + L+ ++ AG+T E + Y +++ ++ Sbjct: 121 FAIS--HFYAGTRLLAKKTAHITSYADLAKKTVASTAGSTNEKVIRQYSADNHLDMQFVL 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + + A D L+ LK P ++ D + P + + D Sbjct: 179 GKDYGDALQLVENDQAVALALDDILLFGLKANAKNPDSLEVVGDALQVEPYGCMLRKDDP 238 Query: 236 EWYNIVSWTHYAMVTAEELG-ITQKNINQ 263 E+ +V T ++ + E + +K Sbjct: 239 EFKALVDGTLARLMKSGEFTRLYRKWFES 267 >gi|330889551|gb|EGH22212.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. mori str. 301020] Length = 304 Score = 196 bits (498), Expect = 6e-48, Method: Composition-based stats. Identities = 48/261 (18%), Positives = 92/261 (35%), Gaps = 8/261 (3%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCR 65 V+I +I + L IK+ G + G + F+ + A+G G+ D Sbjct: 10 VAITAALISTPVFAAELTGTLKKIKESGTITLGHRDASIPFSYIADASGVPMGYSHDIQL 69 Query: 66 ALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + AI D K++Y + ++ R +Q+ +D+ +T + R+ + + Sbjct: 70 KIVEAIKKDLDMPDLKVKYNLVTSQTRIPLVQNGTVDVECGSTTNNVERQQQVDFSIGI- 128 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + G + K L G ++ AGTT+E L M + I + E Sbjct: 129 -FEVGTRLLSKKDSSYKDFDDLKGKNVVTTAGTTSERILKAMNADKQMGMNVISAKDHGE 187 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + R A+ D + L +P + + S + +GD + V Sbjct: 188 SFQMLESGRAVAFMMDDALLAGEMAKAKKPDDWAVTGTAQSYEIYGCMVRKGDAPFKKAV 247 Query: 242 SWTHYAMVTAEELG-ITQKNI 261 A + ++ I K Sbjct: 248 DDAIVATYKSGDINAIYSKWF 268 >gi|134280643|ref|ZP_01767353.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei 305] gi|134247665|gb|EBA47749.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei 305] Length = 299 Score = 195 bits (497), Expect = 6e-48, Method: Composition-based stats. Identities = 44/270 (16%), Positives = 90/270 (33%), Gaps = 9/270 (3%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + + + L I+ + G+ V F+ G Sbjct: 2 MKPLRPLLSIAVGCALAAAAHADDAGPTLKKIRDTRVVTLGVRESSVPFSYYDQQQRTIG 61 Query: 59 FDVDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + + + I ++ ++ +P+ ++ R +Q+ +D+ +T T R + Sbjct: 62 YSQEIALKIVDEIKKTLNRPNLTVREIPITSQNRIPLVQNGTVDLECGSTTHTKERANQV 121 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + Y G I+ K G+ L+G ++ AGTT E L + M I Sbjct: 122 SFSNSIFQY--GMRLIVKKSSGVKDFPDLAGKTVATTAGTTEERLLRQWNAEKGMAMQII 179 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + ++ R A+ D LY K P ++VI + + + D Sbjct: 180 SAKDHADAFLNVKSGRAVAFFMDEPLLYGAKAKEANPGDYVITGNSPVSEAYGCMLRKDD 239 Query: 235 TEWYNIVSWTHYAMVTAEE-LGITQKNINQ 263 + + M + E + K N+ Sbjct: 240 PGFKQLADRVIARMQRSGEAEALYVKWFNR 269 >gi|289168272|ref|YP_003446541.1| ABC transporter substrate binding lipoprotein-amino acid transport [Streptococcus mitis B6] gi|288907839|emb|CBJ22679.1| ABC transporter substrate binding lipoprotein-amino acid transport [Streptococcus mitis B6] Length = 288 Score = 195 bits (497), Expect = 6e-48, Method: Composition-based stats. Identities = 58/287 (20%), Positives = 113/287 (39%), Gaps = 26/287 (9%) Query: 1 MYKDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTGLVG 46 ++K + L F + + A + DIKK G L+ + Sbjct: 3 LFKPLLTVLALAFALIFVTACSSGGNAASSSGKTTAKARTIDDIKKSGELRIAVFGDKKP 62 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F V +G ++G+D++ L+ + K++Y+ ++A R L S ++DI N Sbjct: 63 FGYVDNDGSYQGYDIELGNQLAQDLG---VKVKYVSVDAANRAEYLISNKVDITLANFTV 119 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T R+ + A G + K I+ V QL G ++ V GTT E YF+ Sbjct: 120 TDERKKQVDFAL--PYMKVSLGVVSPKTGLITDVKQLEGKTLIVTKGTTAET----YFEK 173 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 ++ + +++ + A R DA++ D + + A L N V + + + + Sbjct: 174 NHPEIKLQKYDQYSDSYQALLDGRGDAFSTDNTEVLAWALENK--GFEVGITSLGNPDTI 231 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSKDTTNPD 272 A A+ +G+ E + ++ + +K ++ D D Sbjct: 232 AAAVQKGNQELLDFINKDIEKLGKENFFHKAYEKTLHPTYGDAAKAD 278 >gi|261823780|ref|YP_003261886.1| extracellular solute-binding protein family 3 [Pectobacterium wasabiae WPP163] gi|261607793|gb|ACX90279.1| extracellular solute-binding protein family 3 [Pectobacterium wasabiae WPP163] Length = 278 Score = 195 bits (497), Expect = 6e-48, Method: Composition-based stats. Identities = 61/278 (21%), Positives = 103/278 (37%), Gaps = 17/278 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59 M K ++ L L S + A L DI+K G +K + F V G+ Sbjct: 1 MKKQIL-TVALLAGLASVSGAAQADKLDDIQKAGVVKIAVFDSNPPFGYVDPQSKKLVGY 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD A+ A+ K++ N R L S+++D+++ N T R + + Sbjct: 60 DVDIAEAIGKALG---VKVELRATNPANRIPLLSSQKVDLIAANFTITDERAKQVNFSL- 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ FI K + + + I GT E+TL +++ I ++ Sbjct: 116 -PYFATGQKFIARKG-VLKTPDDIKTLRIGADKGTVQEITLREHYPTA----KVISYDDT 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEW 237 AA R A T D + L L +E I P I+K I +G+ Sbjct: 170 PLAFAALRNGNVQAITQDDAKLVGLLANVPDAQKAEFEISPFSITKEYQGVGIPKGEERL 229 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 ++ T + E+ G + ++ +T R Sbjct: 230 TAKINDTL---INLEKQGEAKTIYDRWFGPSTKSSQPR 264 >gi|193077070|gb|ABO11828.2| putative ABC transporter [Acinetobacter baumannii ATCC 17978] Length = 236 Score = 195 bits (497), Expect = 6e-48, Method: Composition-based stats. Identities = 54/240 (22%), Positives = 105/240 (43%), Gaps = 15/240 (6%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 ++ G+ + F + A G +GFDV+ + ++ + D +K++++ A R L++ Sbjct: 2 VRIGVFSDKPPFGYLDAQGKNQGFDVEIAKHVAKDLLGDENKVEFVLTEAANRVEYLKAN 61 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 ++DI+ N T R+ + A G + K I+ V+QL ++ V GTT Sbjct: 62 KVDIIFANFTVTPERKEVVDFA--KPYLKVALGVVSPKSHPITDVAQLKDKTLLVNKGTT 119 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215 + +F + + +E+ E A + R A D L L + P+ V Sbjct: 120 ADS----FFTKTHPEIKLQKYEQNTETFDALKDGRGAALAHDN--LLVLAWAKENPNYTV 173 Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI----TQKNINQVSKDTTNP 271 + ++ + +APA+ +GD E +W + + + G+ +K + V DT NP Sbjct: 174 GITNLGEQDLIAPAVKKGDKELL---NWLNQDLEKLAKEGVIHQAYEKTLKPVYGDTINP 230 >gi|317053314|ref|YP_004119081.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b] gi|316953053|gb|ADU72525.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b] Length = 275 Score = 195 bits (497), Expect = 6e-48, Method: Composition-based stats. Identities = 58/269 (21%), Positives = 101/269 (37%), Gaps = 15/269 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFD 60 +K ++I L L ++ + +A L DIK G +K F + A + G+D Sbjct: 8 HKKNILTIAVLATLLVSA-AASADQLADIKAAGVIKVATFDANPPFGSIDAKSHELVGYD 66 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDF +AL++++ K++ + N R LQS + D++ + T R + Sbjct: 67 VDFAKALANSLG---VKLKLVATNPANRIPLLQSGKADLIVADITITPERAQVIDF--ST 121 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + GQ F++ + + S A I GTT E L + + ++ + Sbjct: 122 PYFVTGQQFLVPATSP-DQLDKYSHARIGAVKGTTGEQALHQRYPQA----RVLAYDDIP 176 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A R A T D + L L ILP ++SK + + + Sbjct: 177 LALTALRNGNVQAITQDSTILAGLLAAAPDKENFKILPALLSKEEIGVGVKKDQPALLQA 236 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTT 269 V+ A E+ G + N T Sbjct: 237 VNDELLA---LEKNGQAAQIYNIWFGPGT 262 >gi|152984549|ref|YP_001348446.1| putative ABC transporter binding protein subunit [Pseudomonas aeruginosa PA7] gi|150959707|gb|ABR81732.1| probable binding protein component of ABC transporter [Pseudomonas aeruginosa PA7] Length = 268 Score = 195 bits (497), Expect = 6e-48, Method: Composition-based stats. Identities = 63/277 (22%), Positives = 102/277 (36%), Gaps = 17/277 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59 M K + + + L S A L DI+K G L+ F V A +G Sbjct: 1 MKK---LPAITALALALVSGLAQADRLEDIRKAGVLRVASFDSNPPFGFVDAKSKQIEGL 57 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD+ +AL+ + ++Q LP N R L + ++D++ N T R + + Sbjct: 58 DVDYAKALADKLG---VRLQVLPTNPANRIPLLTANKVDLVLANFTITPERAQQVDFSI- 113 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ FI+ K ++S L+ + V GT E L + F I ++ Sbjct: 114 -PYFSSGQQFIVKKGT-LTSPEVLNKWRVGVDKGTVNEGVLREKFPGA----KVIAYDDT 167 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 A R + A T D L L ++ + P IS + I +G+ Sbjct: 168 PFAFTALRNGQVQAITQDGPKLIGLLANVPDRDKYEVPPFTISNDLIGVGIPKGEKALTE 227 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRF 276 V + E+ G QK + T + R Sbjct: 228 FVDKSLR---ELEQDGQAQKIYDTWFGPQTKTPLARL 261 >gi|298488720|ref|ZP_07006749.1| glutamate/aspartate periplasmic binding protein precursor [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298156793|gb|EFH97884.1| glutamate/aspartate periplasmic binding protein precursor [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 304 Score = 195 bits (497), Expect = 6e-48, Method: Composition-based stats. Identities = 47/264 (17%), Positives = 90/264 (34%), Gaps = 10/264 (3%) Query: 6 FVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVD 62 + + L T L IK+ G + G + F+ + A+G G+ D Sbjct: 7 LLGVTITAALISTPVFAAELTGTLKKIKESGTITLGHRDASIPFSYIADASGVPMGYSHD 66 Query: 63 FCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 + AI D K++Y + ++ R +Q+ +D+ +T + R+ + + Sbjct: 67 IQLKIVEAIKKDLDMPDLKVKYNLVTSQTRIPLVQNGTVDVECGSTTNNVERQQQVDFSI 126 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + G + K L G ++ AGTT+E L M + I + Sbjct: 127 GI--FEVGTRLLSKKDSSYKDFDDLKGKNVVTTAGTTSERILKAMNADKQMGMNVISAKD 184 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E + R A+ D + L +P + + S + +GD + Sbjct: 185 HGESFQMLESGRAVAFMMDDALLAGEMAKAKKPDDWAVTGTAQSYEIYGCMVRKGDAPFK 244 Query: 239 NIVSWTHYAMVTAEELG-ITQKNI 261 V A + ++ I K Sbjct: 245 KAVDDAIIATYKSGDINAIYSKWF 268 >gi|227508309|ref|ZP_03938358.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227192198|gb|EEI72265.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 282 Score = 195 bits (497), Expect = 6e-48, Method: Composition-based stats. Identities = 68/297 (22%), Positives = 123/297 (41%), Gaps = 35/297 (11%) Query: 1 MYKDFF------VSILCLIILFFTSFSTNASILG-------DIKKRGFLKCGINTGLVGF 47 M K + VS+L ++L + + IKK+G ++ + L + Sbjct: 1 MKKHWLTKLIAVVSVLATLLLVLSGCGNSKKSSSNNPSSVSQIKKKGTIRVAVFGDLPPY 60 Query: 48 AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 V +G G+DV ++ + K++++ +NA R AL S ++D++ N T Sbjct: 61 GWVNKDGKRVGYDVKLAHQVAKDLG---VKVKFVQVNANNRVDALNSNKVDLVLANFTVT 117 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 R+ + A G + K K I+ VSQL ++ V GTT E +YF + Sbjct: 118 PERKQVVSFA--KPYMKVSVGVVSPKNKPITKVSQLQNKNVIVTKGTTAE----NYFTSK 171 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 + F+ + A + R A D S LYA +N + V + I KS +A Sbjct: 172 QPNVKLLKFDSKTQQFNALKNGRGVALADDNSYLYAWSKSNSK--YTVGIKSIGPKSYIA 229 Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSN 284 PA+ +G+ ++++WT+ IT+ N D++ + G + + Sbjct: 230 PAVKKGN---KSLLNWTNKE--------ITKLTKKSFFVSDYNTDLKPYFGKEVKPS 275 >gi|307706279|ref|ZP_07643092.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus mitis SK321] gi|307618312|gb|EFN97466.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus mitis SK321] Length = 288 Score = 195 bits (497), Expect = 7e-48, Method: Composition-based stats. Identities = 57/287 (19%), Positives = 113/287 (39%), Gaps = 26/287 (9%) Query: 1 MYKDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTGLVG 46 ++K + L F + + A + +IKK G L+ + Sbjct: 3 LFKPLLTVLALAFALIFITACSSGGNAGSSSGKTTAKARTIDEIKKSGELRIAVFGDKKP 62 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F V +G ++G+D++ L+ + K++Y+ ++A R L S ++DI N Sbjct: 63 FGYVDNDGSYQGYDIELGNQLAQDLG---VKVKYVSVDAANRAEYLISNKVDITLANFTV 119 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T R+ + A G + K I+ V QL G ++ V GTT E YF+ Sbjct: 120 TDERKKQVDFAL--PYMKVSLGVVSPKTGLITDVKQLEGKTLIVTKGTTAET----YFEK 173 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 ++ + +++ + A R DA++ D + + A L N V + + + Sbjct: 174 NHPEIKLQKYDQYSDSYQALLDGRGDAFSTDNTEVLAWALENK--GFEVGITSLGDPDTI 231 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSKDTTNPD 272 A A+ +G+ E + ++ + + +K ++ D D Sbjct: 232 AAAVQKGNQELLDFINKDIEKLGKENFFHKVYEKTLHPTYGDAAKAD 278 >gi|15597400|ref|NP_250894.1| binding protein component of ABC transporter [Pseudomonas aeruginosa PAO1] gi|218891843|ref|YP_002440710.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa LESB58] gi|254235230|ref|ZP_04928553.1| hypothetical protein PACG_01121 [Pseudomonas aeruginosa C3719] gi|254240626|ref|ZP_04933948.1| hypothetical protein PA2G_01285 [Pseudomonas aeruginosa 2192] gi|296389383|ref|ZP_06878858.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa PAb1] gi|313110962|ref|ZP_07796802.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa 39016] gi|9948227|gb|AAG05592.1|AE004647_1 probable binding protein component of ABC transporter [Pseudomonas aeruginosa PAO1] gi|126167161|gb|EAZ52672.1| hypothetical protein PACG_01121 [Pseudomonas aeruginosa C3719] gi|126194004|gb|EAZ58067.1| hypothetical protein PA2G_01285 [Pseudomonas aeruginosa 2192] gi|218772069|emb|CAW27848.1| probable binding protein component of ABC transporter [Pseudomonas aeruginosa LESB58] gi|310883304|gb|EFQ41898.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa 39016] Length = 268 Score = 195 bits (497), Expect = 7e-48, Method: Composition-based stats. Identities = 63/277 (22%), Positives = 102/277 (36%), Gaps = 17/277 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59 M K + + + L S A L DI+K G L+ F V A +G Sbjct: 1 MKK---LPAITALALALISGLAQADRLEDIRKAGVLRVASFDSNPPFGFVDAKSKQIEGL 57 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD+ +AL+ + ++Q LP N R L + ++D++ N T R + + Sbjct: 58 DVDYAKALADKLG---VRLQVLPTNPANRIPLLTANKVDLVLANFTITPERAQQVDFSI- 113 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ FI+ K ++S L+ + V GT E L + F I ++ Sbjct: 114 -PYFSSGQQFIVKKGT-LTSPEVLNKWRVGVDKGTVNEGVLREKFPGA----KVIAYDDT 167 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 A R + A T D L L ++ + P IS + I +G+ Sbjct: 168 PFAFTALRNGQVQAITQDGPKLIGLLANVPDRDKYEVPPFTISNDLIGVGIPKGEKALTE 227 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRF 276 V + E+ G QK + T + R Sbjct: 228 FVDKSLR---ELEQDGQAQKIYDTWFGPQTKTPLARL 261 >gi|227113891|ref|ZP_03827547.1| extracellular solute-binding protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 278 Score = 195 bits (497), Expect = 7e-48, Method: Composition-based stats. Identities = 61/278 (21%), Positives = 103/278 (37%), Gaps = 17/278 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59 M K ++ L L S + A L DI+K G +K + F V G+ Sbjct: 1 MKKQIL-TVTLLAGLASVSGAAQADKLDDIQKAGVVKIAVFDSNPPFGYVDPQSKKLVGY 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD A+ A+ K++ N R L S+++D+++ N T R + + Sbjct: 60 DVDIAEAIGKALG---VKVELRATNPANRIPLLSSQKVDLIAANFTITDERAKQVNFSI- 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ FI K + + + I GT E+TL +++ I ++ Sbjct: 116 -PYFATGQKFIARKG-VLKTPEDIKTLRIGADKGTVQEITLREHYPTA----KVISYDDT 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEW 237 AA R A T D + L L +E I P I+K I +G+ Sbjct: 170 PLAFAALRNGNVQAITQDDAKLVGLLANVPDAQKAEFEISPFSITKEYQGVGIPKGEERL 229 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 ++ T + E+ G + ++ +T R Sbjct: 230 TAKINDTL---INLEKQGEAKTIYDRWFGPSTKSSQPR 264 >gi|289624942|ref|ZP_06457896.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289650481|ref|ZP_06481824.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. aesculi str. 2250] gi|330867232|gb|EGH01941.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 304 Score = 195 bits (497), Expect = 7e-48, Method: Composition-based stats. Identities = 47/264 (17%), Positives = 90/264 (34%), Gaps = 10/264 (3%) Query: 6 FVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVD 62 + + L T L IK+ G + G + F+ + A+G G+ D Sbjct: 7 LLGVTITAALISTPIFAAELTGTLKKIKESGTITLGHRDASIPFSYIADASGVPMGYSHD 66 Query: 63 FCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 + AI D K++Y + ++ R +Q+ +D+ +T + R+ + + Sbjct: 67 IQLKIVEAIKKDLDMPDLKVKYNLVTSQTRIPLVQNGTVDVECGSTTNNVERQQQVDFSI 126 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + G + K L G ++ AGTT+E L M + I + Sbjct: 127 GI--FEVGTRLLSKKDSSYKDFDDLKGKNVVTTAGTTSERILKAMNADKQMGMNVISAKD 184 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E + R A+ D + L +P + + S + +GD + Sbjct: 185 HGESFQMLESGRAVAFMMDDALLAGEMAKAKKPDDWAVTGTAQSYEIYGCMVRKGDAPFK 244 Query: 239 NIVSWTHYAMVTAEELG-ITQKNI 261 V A + ++ I K Sbjct: 245 KAVDDAIVATYKSGDINAIYSKWF 268 >gi|229095292|ref|ZP_04226284.1| hypothetical protein bcere0020_5490 [Bacillus cereus Rock3-29] gi|228688151|gb|EEL42037.1| hypothetical protein bcere0020_5490 [Bacillus cereus Rock3-29] Length = 275 Score = 195 bits (497), Expect = 7e-48, Method: Composition-based stats. Identities = 57/281 (20%), Positives = 105/281 (37%), Gaps = 24/281 (8%) Query: 1 MYKDFFVSIL-CLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + + CL +L + + IKKRG L G+ F Sbjct: 4 MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAIEQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIRLLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKA 166 R+ + + + GQ ++ K I + + G + G+T+ + Sbjct: 124 EERKKEVDF--SDVYFKAGQSLLVKKGSNIKGIDDIKQGVKVLAVKGSTSTNNIRQKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E +A + D T D + LY + + + ++ I + P Sbjct: 182 A----TVLEFENYSEAFTGLKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSK 266 A+ +G + ++ M + E + +K I Q + Sbjct: 235 GIAVQKGADDLTKEINSLLKDMKASGEYDKLYEKWIGQKQE 275 >gi|289676732|ref|ZP_06497622.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. syringae FF5] Length = 341 Score = 195 bits (497), Expect = 7e-48, Method: Composition-based stats. Identities = 46/243 (18%), Positives = 86/243 (35%), Gaps = 8/243 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPS----KIQ 79 L IK+ G + G + F+ + A+G G+ D + AI D K++ Sbjct: 56 GTLKKIKESGTITLGHRDASIPFSYIADASGVPMGYSHDIQLKIVEAIKKDLDMPDLKVK 115 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 Y + ++ R +Q+ +D+ +T + R+ + + + G + K Sbjct: 116 YNLVTSQTRIPLVQNGTVDVECGSTTNNIERQQQVDFSIGI--FEVGTRLLSKKDSSYKD 173 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L G ++ AGTT+E L M + I + E + R A+ D + Sbjct: 174 FDDLKGKNVVTTAGTTSERILKAMNADKQMGMNVISAKDHGESFQMLESGRAVAFMMDDA 233 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQ 258 L +P + + S + +GD + V A + E+ I Sbjct: 234 LLAGEMAKAKKPDDWAVTGTAQSYEIYGCMVRKGDAPFKKAVDDAIVATFKSGEINNIYS 293 Query: 259 KNI 261 K Sbjct: 294 KWF 296 >gi|49082882|gb|AAT50841.1| PA2204 [synthetic construct] Length = 269 Score = 195 bits (496), Expect = 7e-48, Method: Composition-based stats. Identities = 63/277 (22%), Positives = 102/277 (36%), Gaps = 17/277 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59 M K + + + L S A L DI+K G L+ F V A +G Sbjct: 1 MKK---LPAITALALALISGLAQADRLEDIRKAGVLRVASFDSNPPFGFVDAKSKQIEGL 57 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD+ +AL+ + ++Q LP N R L + ++D++ N T R + + Sbjct: 58 DVDYAKALADKLG---VRLQVLPTNPANRIPLLTANKVDLVLANFTITPERAQQVDFSI- 113 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ FI+ K ++S L+ + V GT E L + F I ++ Sbjct: 114 -PYFSSGQQFIVKKGT-LTSPEVLNKWRVGVDKGTVNEGVLREKFPGA----KVIAYDDT 167 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 A R + A T D L L ++ + P IS + I +G+ Sbjct: 168 PFAFTALRNGQVQAITQDGPKLIGLLANVPDRDKYEVPPFTISNDLIGVGIPKGEKALTE 227 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRF 276 V + E+ G QK + T + R Sbjct: 228 FVDKSLR---ELEQDGQAQKIYDTWFGPQTKTPLARL 261 >gi|227511321|ref|ZP_03941370.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus buchneri ATCC 11577] gi|227523527|ref|ZP_03953576.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus hilgardii ATCC 8290] gi|227085474|gb|EEI20786.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus buchneri ATCC 11577] gi|227089292|gb|EEI24604.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus hilgardii ATCC 8290] Length = 282 Score = 195 bits (496), Expect = 8e-48, Method: Composition-based stats. Identities = 68/297 (22%), Positives = 121/297 (40%), Gaps = 35/297 (11%) Query: 1 MYKDFF------VSILCLIILFFTSFSTNASILG-------DIKKRGFLKCGINTGLVGF 47 M K + VS+L ++L + + IKK+G ++ + L + Sbjct: 1 MKKHWLTKLIAVVSVLATLLLVLSGCGNSKKSSSNNPSSVSQIKKKGTIRVAVFGDLPPY 60 Query: 48 AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 V +G G+DV ++ + K++++ +NA R AL S ++D++ N T Sbjct: 61 GWVNKDGKRVGYDVKLAHQVAKDLG---VKVKFVQVNANNRVDALNSNKVDLVLANFTVT 117 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 R+ + A G + K K I+ VSQL ++ V GTT E +YF + Sbjct: 118 PERKQVVSFA--KPYMKVSVGVVSPKNKPITKVSQLQNKNVIVTKGTTAE----NYFTSK 171 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 + F+ + A + R A D S LYA +N + V + I KS +A Sbjct: 172 QPNVKLLKFDSKTQQFNALKNGRGVALADDNSYLYAWSKSNSK--YTVGIKSIGPKSYIA 229 Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSN 284 PA+ +G+ +WT+ IT+ + N D++ + G + + Sbjct: 230 PAVKKGNESLL---NWTNKE--------ITKLTKKRFFVSDYNTDLKPYFGKEVKPS 275 >gi|213421095|ref|ZP_03354161.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 262 Score = 195 bits (496), Expect = 8e-48, Method: Composition-based stats. Identities = 43/240 (17%), Positives = 86/240 (35%), Gaps = 9/240 (3%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQYLPLNAKERFLA 91 + G V F+ G+ D+ A+ + +K ++ +P+ ++ R Sbjct: 2 IVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEVVKKKLNKPDLQVKLIPITSQNRIPL 61 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151 LQ+ D +T L R+ + G + K I L G ++ V Sbjct: 62 LQNGTFDFECGSTTNNLERQKQAAF--SDTIFVVGTRLLTKKGGDIKDFPDLKGKAVVVT 119 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 +GTT+E+ L + M I + + + R A+ D + L + +P Sbjct: 120 SGTTSEILLHKLNEEQKMGMRIISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKP 179 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 I+ S+ + + D E+ ++ T T+ E +K ++ K+ P Sbjct: 180 DNWEIVGKPQSQEAYGCMLRKNDPEFKKLMDDTIAQAQTSGE---AEKWFDKWFKNPIPP 236 >gi|213691643|ref|YP_002322229.1| extracellular solute-binding protein, family 3 [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213523104|gb|ACJ51851.1| extracellular solute-binding protein, family 3 [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320457730|dbj|BAJ68351.1| amino acid ABC transporter substrate binding component [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 300 Score = 195 bits (496), Expect = 8e-48, Method: Composition-based stats. Identities = 57/259 (22%), Positives = 108/259 (41%), Gaps = 18/259 (6%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 + + A L +IKK G +K + + F V +G ++G+DV F L+ + P Sbjct: 47 SGANAKARSLDEIKKSGKIKIAVFSDKAPFGYVDKDGKYQGYDVYFAERLAKDLGVKP-- 104 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 +Y ++ R L S ++D++ N T R+ + A G + + I Sbjct: 105 -EYTSVDPAARVDVLTSNKVDLVLANFTVTEERKEKVDFA--KPYMKVALGVVSPQNAPI 161 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + V QL G ++ + GTT E +F+ + +++ + A R DA++ D Sbjct: 162 TDVGQLDGKTLIIAKGTTAET----WFEKNAPNVKLQKYDQYADAYNALLDGRGDAFSTD 217 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 + + A +N V + + +APA+ +G+ E + V+ +V + Sbjct: 218 NTEVLAWAKSNK--GFKVGITHLGDDDTIAPAVQKGNKELLDFVND---EIVKLGKDDFF 272 Query: 258 QKNINQ----VSKDTTNPD 272 K+ + V D NPD Sbjct: 273 HKDYQETLAPVYGDEVNPD 291 >gi|187921593|ref|YP_001890625.1| family 3 extracellular solute-binding protein [Burkholderia phytofirmans PsJN] gi|187720031|gb|ACD21254.1| extracellular solute-binding protein family 3 [Burkholderia phytofirmans PsJN] Length = 312 Score = 195 bits (496), Expect = 8e-48, Method: Composition-based stats. Identities = 46/261 (17%), Positives = 94/261 (36%), Gaps = 11/261 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD- 74 + + L I+ + + G + F+ A G+ +D + I Sbjct: 32 VIAADAAPTGTLKKIQDQHVVTIGYRDASIPFSYYDAQQKPIGYSIDIANLIIDRIKAQL 91 Query: 75 ---PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD-GQGFI 130 +++ +P+ ++ R LQ+ ID +T R + + +FD G + Sbjct: 92 KQGDLQVRLIPITSQNRISLLQNGTIDFECTSTTNNAARAQQVDFSNS---FFDIGTRLL 148 Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190 + + GI + L G ++ V AGTT+E ++ + +M + I + E R Sbjct: 149 VRQNSGIHDFADLKGKTVVVGAGTTSEKSIRNMNVEKSMGMNIISAKDHSESFLMLSTGR 208 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 A D + L + RP ++ I+ S + + D + ++ A+ Sbjct: 209 AKAMMMDDALLAGERAKTSRPEDYAIVGTPQSFEAYGCMLRKNDAQLKALMD---AAIAD 265 Query: 251 AEELGITQKNINQVSKDTTNP 271 AE G+ + P Sbjct: 266 AERSGVATAIYKKWFMAPIPP 286 >gi|32490940|ref|NP_871194.1| hypothetical protein WGLp191 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25166146|dbj|BAC24337.1| fliY [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 290 Score = 195 bits (496), Expect = 8e-48, Method: Composition-based stats. Identities = 69/272 (25%), Positives = 115/272 (42%), Gaps = 16/272 (5%) Query: 1 MYKDFFVSILCLIIL--FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWK 57 + K+FF S+L IIL FF + AS L DIKK G L+ I F ++ N Sbjct: 32 LNKNFFNSLLKSIILISFFIFNLSFASKLEDIKKSGLLRVAIFDSNPPFGKIDLKNHSII 91 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G+D DF + +++ + K++ +P N R LQS ++D++ + T RE + Sbjct: 92 GYDADFSKEIANILG---VKLKLIPTNPSNRIPLLQSGKVDLIIADITITKEREKVINF- 147 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + Q +++K + + S I GTT + TL D I +E Sbjct: 148 -SVPYFVTHQKLLVNKYSS-NELKDYSFDKIGAVKGTTGQKTLHDILPKAQ----IISYE 201 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + +A R A T D + L L L ++ IL + ISK + + +G+ + Sbjct: 202 DIPMAFSALRNGNVKAITQDSTILSGLLLAAPDKDKYKILQETISKEVIGIGVKKGEDDL 261 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 + V+ A+ EE G N+ + Sbjct: 262 LSEVN---KALKILEESGKKLIIYNKWFGNKK 290 >gi|218439818|ref|YP_002378147.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7424] gi|218172546|gb|ACK71279.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7424] Length = 298 Score = 195 bits (496), Expect = 8e-48, Method: Composition-based stats. Identities = 54/250 (21%), Positives = 101/250 (40%), Gaps = 11/250 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 MYK F ++ + L++ + + A +L I++ G + G T + F G+W G+ Sbjct: 1 MYKQFAITAITLLLTVTSQAPSWAGRVLDRIRQTGVITAGARTDAIPFGYKNEKGEWVGY 60 Query: 60 DVD---FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +D R + P K+Q + + + RF ++ + IDI +T T RE + Sbjct: 61 SLDILELIRQETEKQLGKPIKLQLVEVTPENRFTKIKDQSIDIECGSTTVTWAREKEVDF 120 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + + G ++ K + +V L+G I V TT E + A + Sbjct: 121 SVS--YFASGTKLLVKKGSQLETVESLAGMRIGVIPNTTNEKAIKFQQPAAQ----LVTV 174 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI-ISKSPLAPAIIQGDT 235 + E D + D L LK T + I+P+ A I Q ++ Sbjct: 175 KDRLEGLQKLEKGEIDGFASDGIILEGLKQTASNSNALEIVPEYPYMYESYACVIPQDES 234 Query: 236 EWYNIVSWTH 245 +W ++V+++ Sbjct: 235 QWRDLVNYSL 244 >gi|253987650|ref|YP_003039006.1| periplasmic binding transport protein [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253779100|emb|CAQ82260.1| putative periplasmic binding transport protein [Photorhabdus asymbiotica] Length = 287 Score = 195 bits (496), Expect = 8e-48, Method: Composition-based stats. Identities = 64/273 (23%), Positives = 104/273 (38%), Gaps = 17/273 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59 M V+ L + T A L DIKK G ++ + F + G+ Sbjct: 10 MKSRVLVTALLAGLALVTGV-AKADKLDDIKKAGTVRIAVFDSNPPFGFIDPQTKKLAGY 68 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD A+++ + K++ P N R L SK+ID+++ N T R + + Sbjct: 69 DVDIANAIANDLG---VKLELRPTNPANRLPLLASKKIDLIAANFTVTDERAKQVDFSI- 124 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ FI K + S + I GT E+TL +++ I ++ Sbjct: 125 -PYFATGQKFIARKG-VLKSPEDIKNLRIGADKGTVQEITLREHYPTA----KVISYDDT 178 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLT--NDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 AA R A T D + L L + +E I P I++ A A +G+ Sbjct: 179 PLAFAALRNGNVQAITQDDAKLVGLLANVPAAQKAEFEISPFSITREYQAVAAAKGEGRL 238 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 +V+ T + E+ G +K N T Sbjct: 239 VEVVNQTL---LKLEKEGEAEKIYNHWFGPDTK 268 >gi|150376683|ref|YP_001313279.1| extracellular solute-binding protein [Sinorhizobium medicae WSM419] gi|150031230|gb|ABR63346.1| extracellular solute-binding protein family 3 [Sinorhizobium medicae WSM419] Length = 280 Score = 195 bits (496), Expect = 8e-48, Method: Composition-based stats. Identities = 60/273 (21%), Positives = 104/273 (38%), Gaps = 9/273 (3%) Query: 6 FVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 F ++ + +A S L ++ RG L G + + A +GFDV Sbjct: 5 FTAVAGFVAAVLAGMPAHAQQASSKLDEVLSRGHLILGTGSTNAPWHFKSAEDKLQGFDV 64 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D R ++ A+F DP KI+++ ++ R + + ++DI + T R + +AF Sbjct: 65 DMGRIIAKALFGDPEKIEFVNQSSDARIPNITTGKVDITCQFMTVTGER--AQQVAFTIP 122 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y +G G ++ L A V + D A + +E V+ Sbjct: 123 YYREGVGLMLKADGKYGDYEALKAAGSSVTISVLQNVYAEDMVHAALPEAAVDQYESVDL 182 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 I A + R DA D S+L N + + A + +GD +W N V Sbjct: 183 IYQALESGRADAAATDQSSLAWYMTQNS--GRYKDAGYGWNPQTYACGVRRGDQDWLNFV 240 Query: 242 SWTHYAMVTAEELGITQKNIN-QVSKDTTNPDV 273 + + +T E K+ KD T P++ Sbjct: 241 NTALHEAMTGVEFDFYAKSFKTWFGKDLTPPEI 273 >gi|262378934|ref|ZP_06072091.1| ABC-type amino acid transport/signal transduction system protein [Acinetobacter radioresistens SH164] gi|262300219|gb|EEY88131.1| ABC-type amino acid transport/signal transduction system protein [Acinetobacter radioresistens SH164] Length = 304 Score = 195 bits (496), Expect = 8e-48, Method: Composition-based stats. Identities = 44/251 (17%), Positives = 91/251 (36%), Gaps = 9/251 (3%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIF----D 73 + S + L I++ G + G + F+ + G+ D + A+ Sbjct: 28 TGSAGSGTLEKIRQSGTVVLGHRDSSIPFSYIADNPNQPVGYAHDLQMKVVEALKQKLNK 87 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 K++Y + ++ R + + +D+ +T R+ + + + G + K Sbjct: 88 PDLKVRYNLVTSQNRIPLVSNGTVDLECGSTTNNKERQQQVDFSVG--FFQVGSRLLTAK 145 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 GI S L G + AGTT+E + + + + I + + + R A Sbjct: 146 DSGIKDFSDLKGKKVVTTAGTTSERYIRQHAQELGIG-EVISAKDHADSFLMLQNGRAAA 204 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 + D L K P + VI+ + + +GD E+ +V A + E Sbjct: 205 FMMDDILLAGEKSKAKEPDKWVIVGTPPIQEVYGCMLRKGDKEFKQVVDDAIKATYASGE 264 Query: 254 LG-ITQKNINQ 263 + + +K Q Sbjct: 265 INDMYKKWFQQ 275 >gi|83746015|ref|ZP_00943071.1| Glutamate/aspartate-binding protein [Ralstonia solanacearum UW551] gi|207741963|ref|YP_002258355.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia solanacearum IPO1609] gi|83727409|gb|EAP74531.1| Glutamate/aspartate-binding protein [Ralstonia solanacearum UW551] gi|206593349|emb|CAQ60276.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia solanacearum IPO1609] Length = 301 Score = 195 bits (496), Expect = 8e-48, Method: Composition-based stats. Identities = 43/251 (17%), Positives = 87/251 (34%), Gaps = 7/251 (2%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 L I+ + G+ + F+ + GF D C + A+ K Sbjct: 23 AQAQALDGTLKKIQDSNTILIGVREASIPFSYRDSKNQIVGFSADLCARVIEAVKQKVGK 82 Query: 78 ----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 +Q +P+ ++ R +Q+ +D+ T RE + + Sbjct: 83 PDLQVQQIPVTSQNRTALVQNGSVDLECGVTTHLKSREQQTAF--STTFFIAATRLLTGV 140 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 G+ L+G S+ AGTT+E L M + + + E ++ R A Sbjct: 141 SSGVKDFPDLAGKSVITNAGTTSERILRKMNDEKKMNMNVVSGKDYGESFLTLQSGRVQA 200 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 + D L + +P++ V+ S + + D ++ +V T ++ E Sbjct: 201 FMMDDVLLAGARTLAQKPADWVVTGTPQSFEAYGFMLRRDDPQFKKLVDDTLTGVMKRGE 260 Query: 254 LG-ITQKNINQ 263 +G + K + Sbjct: 261 IGTLYAKWFEK 271 >gi|91787876|ref|YP_548828.1| extracellular solute-binding protein [Polaromonas sp. JS666] gi|91697101|gb|ABE43930.1| amino acid ABC transporter substrate-binding protein, PAAT family [Polaromonas sp. JS666] Length = 294 Score = 195 bits (496), Expect = 9e-48, Method: Composition-based stats. Identities = 47/293 (16%), Positives = 104/293 (35%), Gaps = 22/293 (7%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 F + +++ + + +A L + + V F+ + + GF V+ Sbjct: 2 KFSTLMTAVLLTAGLAATASAQTLKKVADSNKITVSYREASVPFSYLIGSTKAVGFSVEL 61 Query: 64 CRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 A+ + K + Y+P+ ++ R L + D+ +T R + + Sbjct: 62 TEAIIDDVRKKVKKPNLEVAYMPVTSQNRIPLLVNGTYDLECGSTTNNSARGKDVAFSIN 121 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 ++ G + K G+ + + L+ ++ GTT + Y N+ I+ + Sbjct: 122 --MFYTGTRLLTKKTSGVKNYADLTKKTVASTTGTTNAQVIRKYNTEKNLDMQLILGKDH 179 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 ++ + R A+ D L+ L + P+ ++ D + P A + + D E+ Sbjct: 180 DDSLLLVESDRAMAFAMDDILLFGLMANSKNPAALQVVGDSLQVEPYACMLRKDDPEFKK 239 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLT 292 +V T ++ + E K + + P G LGL Sbjct: 240 LVDGTITRLMKSGE---FTKLYAKWFESPMPP-------------KGTNLGLP 276 >gi|257057662|ref|YP_003135494.1| periplasmic component of amino acid ABC-type transporter/signal transduction system [Saccharomonospora viridis DSM 43017] gi|256587534|gb|ACU98667.1| periplasmic component of amino acid ABC-type transporter/signal transduction system [Saccharomonospora viridis DSM 43017] Length = 324 Score = 195 bits (496), Expect = 9e-48, Method: Composition-based stats. Identities = 48/254 (18%), Positives = 99/254 (38%), Gaps = 13/254 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSK 77 S S + IK+RG L G++ F G GFD+D R ++ A+ + Sbjct: 74 SSVPPGSTMAKIKERGHLIVGVDQNTYLFGFPDPETGKLSGFDIDIARKIAEALLGNADA 133 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 + + +++ ER AL++ +DI+ R T R + + Y GQ ++ Sbjct: 134 VHFKAISSAERIDALRNGDVDIVVRTFSITCDRLEDINF--STVYYVAGQRVLVPVGSTA 191 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 +S L +C +T+ +A A + P+ + + + + DA + D Sbjct: 192 RGLSDLGDKRVCAAKDSTSLRNIA----ASRPRPIPVAVDDWSDCLVLLQQGQVDAISTD 247 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 + L L+ + I+ + +K I + + + V+ A++ G Sbjct: 248 DTILAGLRAQDRT--GTKIVGEPFTKEYYGIGIPKENEDMVRFVN----AVLENIRGGAW 301 Query: 258 QKNINQVSKDTTNP 271 Q + ++ ++ P Sbjct: 302 QASYDRWLREHLGP 315 >gi|170733526|ref|YP_001765473.1| extracellular solute-binding protein [Burkholderia cenocepacia MC0-3] gi|169816768|gb|ACA91351.1| extracellular solute-binding protein family 3 [Burkholderia cenocepacia MC0-3] Length = 306 Score = 195 bits (496), Expect = 9e-48, Method: Composition-based stats. Identities = 44/273 (16%), Positives = 94/273 (34%), Gaps = 9/273 (3%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + V+ L + L +++ + G V F+ V A G GF D Sbjct: 13 RPLLVAACALACGASVAAEPLTGTLDKVRQSNLISIGHRETSVPFSYVDAGGKVIGFSQD 72 Query: 63 FCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 C + +A+ K ++++P+ ++ R +Q+ +D+ T R + Sbjct: 73 LCDRVIAAVKARTGKPDLQVRFIPVTSQNRIPLVQNGTVDLECGVTTNLAARHAQVAF-- 130 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + + GI L+G ++ GTT+E L + M I + Sbjct: 131 STTFFVATTRLLTRTTSGIRDFPDLAGKTVVTNQGTTSERLLRKMNEEKKMNMQIISAKD 190 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E + R AY D L ++ +P++ ++ S + + D ++ Sbjct: 191 YGEGRLTLESGRAAAYMMDDVLLAGVRQLAAKPADWQLVGTPQSSEAYGFMLRKDDPQFK 250 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 +V ++ + E+ ++ P Sbjct: 251 ALVDGVLVQLMKSGEIN---ALYDKWFMKPVPP 280 >gi|15596539|ref|NP_250033.1| binding protein component of ABC transporter [Pseudomonas aeruginosa PAO1] gi|218892553|ref|YP_002441422.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa LESB58] gi|254234461|ref|ZP_04927784.1| hypothetical protein PACG_00313 [Pseudomonas aeruginosa C3719] gi|254239713|ref|ZP_04933035.1| hypothetical protein PA2G_00337 [Pseudomonas aeruginosa 2192] gi|9947282|gb|AAG04731.1|AE004563_8 probable binding protein component of ABC transporter [Pseudomonas aeruginosa PAO1] gi|126166392|gb|EAZ51903.1| hypothetical protein PACG_00313 [Pseudomonas aeruginosa C3719] gi|126193091|gb|EAZ57154.1| hypothetical protein PA2G_00337 [Pseudomonas aeruginosa 2192] gi|218772781|emb|CAW28566.1| probable binding protein component of ABC transporter [Pseudomonas aeruginosa LESB58] Length = 302 Score = 195 bits (496), Expect = 9e-48, Method: Composition-based stats. Identities = 48/273 (17%), Positives = 93/273 (34%), Gaps = 12/273 (4%) Query: 6 FVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVD 62 +S + L + L IK+ G + G + F+ + G G+ D Sbjct: 7 LLSTAIVAALLSAPVVADELTGTLKKIKETGTITLGHRDASIPFSYLGTEPGKPIGYSHD 66 Query: 63 FCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 + A+ + K++Y + ++ R +Q+ +DI +T R+ + + Sbjct: 67 LQLKVVEAVKKELNLPELKVRYNLVTSQTRIPLVQNGTVDIECGSTTNNEERQKQVDFSV 126 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + G + K I L G ++ AGTT+E L M + I + Sbjct: 127 GI--FEVGTRLLSKKTANIKDFDDLKGKNVVTTAGTTSERLLKAMNADKKMGMNIISAKD 184 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E + R A+ D + LY +P + V+ S + +GD + Sbjct: 185 HGESFMMLESGRAVAFMMDDALLYGEMAKAKKPDDWVVGGTPQSFEIYGCMVRKGDAAFK 244 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 +V + E+ K ++ P Sbjct: 245 KVVDKAITDTYASGEVN---KIYDKWFTQPIPP 274 >gi|328948883|ref|YP_004366220.1| ABC transporter periplasmic protein family 3 [Treponema succinifaciens DSM 2489] gi|328449207|gb|AEB14923.1| ABC-type transporter, periplasmic subunit family 3 [Treponema succinifaciens DSM 2489] Length = 278 Score = 195 bits (496), Expect = 9e-48, Method: Composition-based stats. Identities = 54/267 (20%), Positives = 104/267 (38%), Gaps = 14/267 (5%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 +IL L T+A + IKK G +K + + F V G+++G+DV F Sbjct: 13 IAAILALFSACVKENKTSARTVEQIKKSGEIKIAVFSDKKPFGYVDEYGEYQGYDVYFGN 72 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ + K++Y+P+ A R L + ++DI+ N T R + A Sbjct: 73 RIAKDLG---VKVKYVPVEAASRVEFLVTGKVDIVLANFTVTPERAEKVDFAL--PYMKV 127 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 G + + ++ L G + + GTT E YF + + + F++ E +A Sbjct: 128 ALGVVSPESALVTKPEDLIGKKLIISKGTTAET----YFTKNYPEVELLKFDQYAEAYSA 183 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 R + D + + A L + P V + + +A A+ +G+T W + Sbjct: 184 LLDGRGAGMSTDNTEVLAWAL--ENPGYKVGIESLGELDTIAAAVQKGNTSLLE---WIN 238 Query: 246 YAMVTAEELGITQKNINQVSKDTTNPD 272 +V + + + T + Sbjct: 239 NEIVELGKENFFHADYEATLRSTYGAE 265 >gi|83750017|ref|ZP_00946953.1| Glutamate/aspartate-binding protein [Ralstonia solanacearum UW551] gi|207723706|ref|YP_002254104.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia solanacearum MolK2] gi|207743865|ref|YP_002260257.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia solanacearum IPO1609] gi|83723317|gb|EAP70559.1| Glutamate/aspartate-binding protein [Ralstonia solanacearum UW551] gi|206588910|emb|CAQ35872.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia solanacearum MolK2] gi|206595265|emb|CAQ62192.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia solanacearum IPO1609] Length = 308 Score = 195 bits (496), Expect = 9e-48, Method: Composition-based stats. Identities = 42/260 (16%), Positives = 92/260 (35%), Gaps = 11/260 (4%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS----SAIFD 73 + + + L IK+ G + G + F+ ++G+ G+ + + + Sbjct: 28 GAQAQSNDTLAKIKQSGVISVGYRESSIPFSYEASSGNVTGYSQEISNLIVDGVKKTLGL 87 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 +++ P+ ++ R LQ+ ID +T L R+ + + Y G ++ K Sbjct: 88 SSLQVKLTPITSQNRIPLLQNGTIDFECGSTTNNLERQKQVAFSNNIFIY--GMLMLVKK 145 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM--KYHPIVFERVEEIDAAYRAHRC 191 GI L G ++ AGTT + L K + I+ + + + R Sbjct: 146 DSGIKDFPDLKGKTVVTTAGTTEDRILQKMNGEAKDADKMNLILAKDHGQAFLTLESGRA 205 Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 A+ D LY + ++ V+ + A + + D + + ++T+ Sbjct: 206 VAFVMDEPLLYGERTKAKNQADWVVTGTPLQTETYACMMRKDDPAFKKVADDVIADLMTS 265 Query: 252 EELGITQKNINQVSKDTTNP 271 G + + P Sbjct: 266 ---GRANALYKKWFQSPIPP 282 >gi|238893281|ref|YP_002918015.1| cysteine transport system periplasmic binding component [Klebsiella pneumoniae NTUH-K2044] gi|238545597|dbj|BAH61948.1| cysteine transport system periplasmic binding component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 283 Score = 195 bits (496), Expect = 9e-48, Method: Composition-based stats. Identities = 61/263 (23%), Positives = 97/263 (36%), Gaps = 14/263 (5%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKI 78 A L DIK G +K F V A G+DVDF +AL+ A+ K+ Sbjct: 33 SQAQADQLADIKAAGVVKVATFDANPPFGSVDAKTHHIVGYDVDFAQALAKALG---VKL 89 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + + N R LQS + D++ + T R + + GQ F++ Sbjct: 90 ELVATNPANRIPLLQSGKADLIVADITITPERAQVIDF--STPYFVTGQQFLVPAGSPDK 147 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + + S A I GTT E L F + ++ + A R A T D Sbjct: 148 -LDEYSKARIGAVKGTTGEQALHQRFPQA----RVLSYDDIPLALTALRNGNVQAITQDS 202 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 + L L ++ ILPD++SK + + +G+ V+ +V E+ G Sbjct: 203 TILAGLLAEAPDKAKFKILPDLLSKEEIGVGVKKGEPALLKAVND---ELVKLEKTGEAA 259 Query: 259 KNINQVSKDTTNPDVQRFLGIDK 281 K + T R I+ Sbjct: 260 KIYDVWFGPATKTPQPRAFTIEA 282 >gi|146337810|ref|YP_001202858.1| ABC transporter substrate-binding protein [Bradyrhizobium sp. ORS278] gi|146190616|emb|CAL74618.1| Putative ABC transporter (substrate binding protein) [Bradyrhizobium sp. ORS278] Length = 308 Score = 195 bits (496), Expect = 9e-48, Method: Composition-based stats. Identities = 46/256 (17%), Positives = 93/256 (36%), Gaps = 17/256 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-----------SILGDIKKRGFLKCGINTGLVGFAE 49 M V+ L + L + + L IK R + G F+ Sbjct: 1 MRGCVVVASLTVAALLACAGAQPGIAQSGAGEGLSPTLAAIKARHVVNLGYRESSPPFSF 60 Query: 50 VKANGDWKGFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTD 105 + G G+ ++ C A+ I + +I Y+ + + +R A+ + +ID+ +T Sbjct: 61 LDQAGRPIGYSLELCEAIVEEIGGEIDDPGLRIAYVKVTSDDRIDAVVAGRIDLECGSTT 120 Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165 R + P+ + G ++ K ++S + L G S+ V GTT E + + + Sbjct: 121 ANAERSRQVSF--SPLIFVAGTKLMVSKGSPVASATDLRGKSVVVTKGTTNEAAMREVDR 178 Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225 + + E+ + DA+ D L L + + I+ D +S P Sbjct: 179 KSALGLTVVTATDHEQSYQMLVDGKVDAFATDDILLSGLIARHKAQDKMRIVGDYLSYDP 238 Query: 226 LAPAIIQGDTEWYNIV 241 + + + +V Sbjct: 239 YGIMFRKDEPQLAAVV 254 >gi|134293771|ref|YP_001117507.1| extracellular solute-binding protein [Burkholderia vietnamiensis G4] gi|134136928|gb|ABO58042.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia vietnamiensis G4] Length = 298 Score = 195 bits (496), Expect = 9e-48, Method: Composition-based stats. Identities = 48/251 (19%), Positives = 88/251 (35%), Gaps = 9/251 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQY 80 L IK G + GI V F+ + G+ D + A+ + ++ Sbjct: 27 GTLKKIKDTGVVSLGIRESSVPFSYSDNQQNNIGYSRDIAARIIDALKAELKAPNLTVKE 86 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +P+ ++ R LQ+ ID +T TL R+ + Y G F K G+ Sbjct: 87 IPITSQNRIPLLQNGTIDFECGSTTNTLERQKQAAFSNSIFLY--GIRFSTRKDSGVKDF 144 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + L+G ++ AGT+ E L + M I + E R A+ D Sbjct: 145 ADLAGKTVATTAGTSDERLLRKLNEEKAMNMTIISAKDHAEAFMNVTTGRAVAFVMDEPL 204 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 LY + P + + + A + + D + +V + T+ G ++ Sbjct: 205 LYGEIAKDRNPGAYTVAGTPLVHENYACMLRKDDPAFKQLVDRVIAQLQTS---GAAEQL 261 Query: 261 INQVSKDTTNP 271 ++ P Sbjct: 262 YDRWFMQPIPP 272 >gi|167741079|ref|ZP_02413853.1| putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 14] Length = 242 Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats. Identities = 40/225 (17%), Positives = 80/225 (35%), Gaps = 6/225 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQ 79 L I+ G + G+ V F+ G+ + + I ++ ++ Sbjct: 20 GPTLKKIRDTGVVTLGVRESSVPFSYYDQQQRTIGYSQEIALKIVDEIKKTLNRPNLTVR 79 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R +Q+ +D+ +T T R + + Y G I+ K G+ Sbjct: 80 EIPITSQNRIPLVQNGTVDLECGSTTHTKERANQVSFSNSIFQY--GMRLIVKKSSGVKD 137 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L+G ++ AGTT E L + M I + + ++ R A+ D Sbjct: 138 FPDLAGKTVATTAGTTEERLLRQWNAEKGMAMQIISAKDHADAFLNVKSGRAVAFFMDEP 197 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 LY K P ++VI + + + D + + Sbjct: 198 LLYGAKAKEANPGDYVITGNSPVSEAYGCMLRKDDPGFKQLADRV 242 >gi|70732196|ref|YP_261952.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas fluorescens Pf-5] gi|68346495|gb|AAY94101.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas fluorescens Pf-5] Length = 304 Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 91/252 (36%), Gaps = 10/252 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPS----KIQ 79 L IK+ G + G + F+ + A+G G+ D + AI D K++ Sbjct: 28 GTLKKIKESGTITLGHRDASIPFSYIADASGVPVGYSHDIQLKIVEAIKKDLDMPDLKVK 87 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 Y + ++ R +Q+ +D+ +T + R+ + + + G + K Sbjct: 88 YNLVTSQTRIPLVQNGTVDVECGSTTNNVERQQQVDFSVGI--FEIGTRLLSKKDSSYKD 145 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L G ++ AGTT+E L M + I + E + R A+ D + Sbjct: 146 FADLKGKNVVTTAGTTSERILKAMNADKQMGMNVISAKDHGESFQMLESGRAVAFMMDDA 205 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L +P++ + S + +GD + V A + E+ K Sbjct: 206 LLAGEMAKAKKPTDWAVTGTPQSYEIYGCMVRKGDAPFKKAVDDAIVATYKSGEIN---K 262 Query: 260 NINQVSKDTTNP 271 ++ + P Sbjct: 263 IYDKWFQSPIPP 274 >gi|49084568|gb|AAT51210.1| PA1342 [synthetic construct] Length = 303 Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats. Identities = 48/273 (17%), Positives = 93/273 (34%), Gaps = 12/273 (4%) Query: 6 FVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVD 62 +S + L + L IK+ G + G + F+ + G G+ D Sbjct: 7 LLSTAIVAALLSAPVVADELTGTLKKIKETGTITLGHRDASIPFSYLGTEPGKPIGYSHD 66 Query: 63 FCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 + A+ + K++Y + ++ R +Q+ +DI +T R+ + + Sbjct: 67 LQLKVVEAVKKELNLPELKVRYNLVTSQTRIPLVQNGTVDIECGSTTNNEERQKQVDFSV 126 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + G + K I L G ++ AGTT+E L M + I + Sbjct: 127 GI--FEVGTRLLSKKTANIKDFDDLKGKNVVTTAGTTSERLLKAMNADKKMGMNIISAKD 184 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E + R A+ D + LY +P + V+ S + +GD + Sbjct: 185 HGESFMMLESGRAVAFMMDDALLYGEMAKAKKPDDWVVGGTPQSFEIYGCMVRKGDAAFK 244 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 +V + E+ K ++ P Sbjct: 245 KVVDKAITDTYASGEVN---KIYDKWFTQPIPP 274 >gi|299066140|emb|CBJ37323.1| putative amino-acid-binding periplasmic abc transporter protein [Ralstonia solanacearum CMR15] Length = 284 Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats. Identities = 56/268 (20%), Positives = 105/268 (39%), Gaps = 15/268 (5%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA--NGDWKGFDVDF 63 + + + A L D+KK+G L CG+ F+ +K + + G+DVD Sbjct: 13 LACAAIVAAVTLAAVPAKADQLADVKKKGELVCGVLGTDEPFSFLKDPMSREIVGYDVDM 72 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 C A++ ++ P L R LQ ++D+L+ + RE + + T+ Sbjct: 73 CHAVAKSLGVKPV---LKQLAVAARIPELQQGRVDLLAASLTHNKEREAQIDFSLS--TF 127 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 GQ ++ K GI+S++QL G + G+T E + K + + F+ + Sbjct: 128 VTGQKAMVRKDSGITSLAQLDGKKVLTVKGSTMEANIGKAIKNAD----IVSFDNSPQAL 183 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPS-EHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A + + AY D + L S ++ +LP +S A + + + + V+ Sbjct: 184 LALQQGKGAAYVNDETTLVGNMAKLGAASRDYALLPQNLSTEHFALGLRKNEPAFREQVN 243 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTN 270 E G Q ++ T Sbjct: 244 KVLRG---LEASGEAQTLYDKWFGPGTK 268 >gi|169834023|ref|YP_001694088.1| glutamine ABC transporter substrate-binding protein [Streptococcus pneumoniae Hungary19A-6] gi|168996525|gb|ACA37137.1| ABC transporter substrate-binding protein - glutamine transport/Major cell binding factor [Streptococcus pneumoniae Hungary19A-6] Length = 264 Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats. Identities = 60/266 (22%), Positives = 107/266 (40%), Gaps = 16/266 (6%) Query: 1 MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVK-ANGDWK 57 M K FF+S L + + + A + DI+KRG L G+ + F G + Sbjct: 1 MKKKFFLSALLISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYS 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G + D + ++ KI+Y+P+ A+ R L ++Q+D+ T R+ Sbjct: 61 GIETDLAKMVADEF---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKLYNF- 116 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y D GF+++K I + L+G +I V G+ T+ + + K +K+ + Sbjct: 117 -TSPYYTDASGFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVELG 175 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E+ + AHR DA++ D S L +L D S + +TE Sbjct: 176 SYPELITSLHAHRIDAFSVDHSILSGYTSK-----RTALLNDSFKPSDYGIVTKKSNTEL 230 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQ 263 + + + G QK ++ Sbjct: 231 NDYLDTLVTKW---SKDGSLQKLYDR 253 >gi|299066136|emb|CBJ37319.1| glutamate/aspartate ABC transporter,periplasmic binding subunit [Ralstonia solanacearum CMR15] Length = 308 Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats. Identities = 43/256 (16%), Positives = 91/256 (35%), Gaps = 11/256 (4%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS----SAIFDDPSK 77 + L IK+ G + G + F+ ++G+ G+ + + + + Sbjct: 32 QSNDTLAKIKQSGVISVGYRESSIPFSYEASSGNITGYSQEISNLIVDGVKKKLGLSGLQ 91 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++ P+ ++ R LQ+ ID +T L R+ + + Y G ++ K GI Sbjct: 92 VKLTPITSQNRIPLLQNGTIDFECGSTTNNLERQKQVAFSNNIFIY--GMLMLVKKGAGI 149 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNM--KYHPIVFERVEEIDAAYRAHRCDAYT 195 L G ++ AGTT + L K + I+ + + + R A+ Sbjct: 150 KDFPDLKGKTVVTTAGTTEDRILQKMNGEAKDADKMNLILAKDHGQAFLTLESGRAVAFV 209 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D LY + S+ V++ + A + + D + + ++T+ G Sbjct: 210 MDEPLLYGERTKAKNQSDWVVVGTPLQTETYACMMRKDDPAFKKVADDVIADLMTSGRAG 269 Query: 256 ITQKNINQVSKDTTNP 271 + + P Sbjct: 270 ---ALYKKWFQSPIPP 282 >gi|83593422|ref|YP_427174.1| extracellular solute-binding protein [Rhodospirillum rubrum ATCC 11170] gi|83576336|gb|ABC22887.1| extracellular solute-binding protein, family 3 [Rhodospirillum rubrum ATCC 11170] Length = 305 Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats. Identities = 50/259 (19%), Positives = 91/259 (35%), Gaps = 10/259 (3%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD---- 73 S L IK+ G + G + F+ + N G+ +D C + A+ Sbjct: 20 ASAEELTGTLKKIKETGEIAIGHRDSSIPFSYLDDNQKPIGYAMDICAHVVEAVKAELKL 79 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 D ++ P+ + R + + +D+ +T L R+ + F+ K Sbjct: 80 DTLAVKLTPVTSATRIPLIANGTVDLECGSTTNNLDRQQQASFTNS--HFLTASRFVSKK 137 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 + S+ L G ++ AGTT + + A + I + E R A Sbjct: 138 TSNLKSIDDLKGKTVVSTAGTTNIKQVNELNTARGLGIKIIPAKDHAEGFLMVETDRAVA 197 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIIS-KSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 + D L L + PS +VI D S P + + D + +V A+ T+ Sbjct: 198 FAMDDILLATLVAGSKTPSAYVISEDAFSLPEPYGIMLRKDDPAFKAVVDRATAALYTSP 257 Query: 253 ELGITQKNINQVSKDTTNP 271 E K + ++ P Sbjct: 258 E---GPKLFAKWFENPIPP 273 >gi|239813837|ref|YP_002942747.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] gi|239800414|gb|ACS17481.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] Length = 300 Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats. Identities = 51/254 (20%), Positives = 103/254 (40%), Gaps = 10/254 (3%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC----RALSSAIFDDPSK 77 L IK G + G+ G + NG + GF D C + + + + Sbjct: 21 QANDTLAKIKASGSITEGVRESS-GLSYTLGNGQYTGFHYDICANIIKDIQKHLGLAKLE 79 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 +Y P+ ++ R +Q+ +D+ +T R+ + A TY + + GI Sbjct: 80 TKYQPVTSQNRVPLVQNGTVDLECGSTTNNATRQKDVSFAV--TTYVEEVRIAVKANSGI 137 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 +S+ L+G ++ GTT+ TL +A + + + + + + R DA+ D Sbjct: 138 NSIKDLNGKTVATTTGTTSVQTLRKNERAGGIDFKELYGKDHSDSFLLLESGRADAFVMD 197 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 S L + + P++ I+ +++S P+A I + D + +V + A + + G Sbjct: 198 GSILASNIAKSKSPADFKIVGEVLSVEPIAIMIRKDDPAFKKVVDDSIKAQI---KNGDL 254 Query: 258 QKNINQVSKDTTNP 271 K ++ P Sbjct: 255 AKLWDKWFLKPIPP 268 >gi|327459027|gb|EGF05375.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK1057] Length = 291 Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats. Identities = 57/253 (22%), Positives = 102/253 (40%), Gaps = 14/253 (5%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 +S + L +IKK G L+ + + F V NG ++G+D+ L+ + P Sbjct: 35 AASSKTVKVRSLEEIKKSGKLRIAVFSDKKPFGYVDNNGKYQGYDIYLGDQLAKDLGVKP 94 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 +Y+P++A R L S ++DI N T R+ + A G + K Sbjct: 95 ---EYVPVDAANRAEYLISNKVDITLANFTVTDERKKQVDFAL--PYMKVSLGVVSPKGS 149 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I+ QL G ++ + GTT E YF+ + +++ + A R DA++ Sbjct: 150 VITKPEQLEGKTLIITKGTTAET----YFEKNYPNIKLQKYDQYSDAYQALLDGRGDAFS 205 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D + + A L N V + + +APA+ +G+TE N ++ + Sbjct: 206 TDNTEVLAWALENK--GFEVGITSLGDPDTIAPAVQKGNTELLNYINDEIK---KLGKEN 260 Query: 256 ITQKNINQVSKDT 268 K + T Sbjct: 261 FFHKAYEETLHPT 273 >gi|207727575|ref|YP_002255969.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia solanacearum MolK2] gi|206590813|emb|CAQ56425.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia solanacearum MolK2] Length = 301 Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats. Identities = 43/251 (17%), Positives = 87/251 (34%), Gaps = 7/251 (2%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 L I+ + G+ + F+ + GF D C + A+ K Sbjct: 23 AQAQALDGTLKKIQDSNTILIGVREASIPFSYRDSKNQIVGFSADLCARVIEAVKQKVGK 82 Query: 78 ----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 +Q +P+ ++ R +Q+ +D+ T RE + + Sbjct: 83 PDLQVQQIPVTSQNRTALVQNGSVDLECGVTTHLKSREQQTAF--STTFFIAATRLLTGV 140 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 G+ L+G S+ AGTT+E L M + + + E ++ R A Sbjct: 141 NSGVKDFPDLAGKSVITNAGTTSERILRKMNDEKKMNMNVVSGKDYGESFLTLQSGRVQA 200 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 + D L + +P++ V+ S + + D ++ +V T ++ E Sbjct: 201 FMMDDVLLAGARTLAQKPADWVVTGTPQSFEAYGFMLRRDDPQFKKLVDDTLTGVMKRGE 260 Query: 254 LG-ITQKNINQ 263 +G + K + Sbjct: 261 IGTLYAKWFEK 271 >gi|15902578|ref|NP_358128.1| amino acid ABC transporter amino acid-binding protein [Streptococcus pneumoniae R6] gi|116516520|ref|YP_816032.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae D39] gi|15458109|gb|AAK99338.1| ABC transporter substrate-binding protein - glutamine transport/Major cell binding factor precursor [Streptococcus pneumoniae R6] gi|116077096|gb|ABJ54816.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae D39] Length = 264 Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats. Identities = 59/266 (22%), Positives = 107/266 (40%), Gaps = 16/266 (6%) Query: 1 MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVK-ANGDWK 57 M K FF+S L + + + A + DI+KRG L G+ + F G + Sbjct: 1 MKKKFFLSALLISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYS 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G + D + ++ + KI+Y+P+ A+ R L ++Q+D+ T R+ Sbjct: 61 GIETDLAKMVADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKLYNF- 116 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y D GF+++K I + L+G +I V G+ T+ + + K +K+ + Sbjct: 117 -TSPYYTDASGFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVELG 175 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E+ + AHR D ++ D S L +L D S + +TE Sbjct: 176 SYPELITSLHAHRIDTFSVDRSILSGYTSK-----RTALLDDSFKPSDYGIVTKKSNTEL 230 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQ 263 + + + G QK ++ Sbjct: 231 NDYLDNLVTKW---SKDGSLQKLYDR 253 >gi|148652493|ref|YP_001279586.1| extracellular solute-binding protein [Psychrobacter sp. PRwf-1] gi|148571577|gb|ABQ93636.1| extracellular solute-binding protein, family 3 [Psychrobacter sp. PRwf-1] Length = 334 Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats. Identities = 49/259 (18%), Positives = 92/259 (35%), Gaps = 10/259 (3%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPS 76 + + ++ L IK G + G + F+ + G+ D + A+ D + Sbjct: 49 AANADASATLNKIKDSGTIVVGFRDSSIPFSYIADDPNQPLGYAHDLEMKVVDAVKDKLN 108 Query: 77 ----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 KI+Y + ++ R +Q+ ID +T R+ + + + G + Sbjct: 109 MPDLKIRYNLITSQTRIPLVQNGTIDFECGSTTNNEERQKQVAFSNG--FFEIGTRLLTK 166 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 K GI+ L G ++ AGTT+E + Y + I + E R D Sbjct: 167 KDSGINDFEDLKGRTLVTTAGTTSERYIRQYNDEKKLGAKIISAKDHGEAFLMLEKGRAD 226 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 A+ D L K + P E I+ S + + D ++ IV + + Sbjct: 227 AFMMDDVLLAGEKAKSAHPEEWQIVGTPQSFEIYGCMMRKDDPQFKAIVDEALKNVYASG 286 Query: 253 ELGITQKNINQVSKDTTNP 271 E+ N+ + P Sbjct: 287 EIN---DIYNKWFMNPIPP 302 >gi|300703458|ref|YP_003745060.1| glutamate/aspartate ABC transporter periplasmic binding subunit [Ralstonia solanacearum CFBP2957] gi|299071121|emb|CBJ42433.1| glutamate/aspartate ABC transporter,periplasmic binding subunit [Ralstonia solanacearum CFBP2957] Length = 308 Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats. Identities = 42/260 (16%), Positives = 92/260 (35%), Gaps = 11/260 (4%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS----SAIFD 73 + + + L IK+ G + G + F+ ++G+ G+ + + + Sbjct: 28 GAQAQSNDTLAKIKQSGVISVGYRESSIPFSYEASSGNVTGYSQEISNLIVDGVKKTLGL 87 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 +++ P+ ++ R LQ+ ID +T L R+ + + Y G ++ K Sbjct: 88 SSLQVKLTPITSQNRIPLLQNGTIDFECGSTTNNLERQKQVAFSNNIFIY--GMLMLVKK 145 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM--KYHPIVFERVEEIDAAYRAHRC 191 GI L G ++ AGTT + L K + I+ + + + R Sbjct: 146 DSGIKDFPDLKGKTVVTTAGTTEDRILQKMNGEAKDADKMNLILAKDHGQAFLTLESGRA 205 Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 A+ D LY + ++ V+ + A + + D + + ++T+ Sbjct: 206 VAFVMDEPLLYGERTKAKNQADWVVTGTPLQTETYACMMRKDDPAFKKVADDVIADLMTS 265 Query: 252 EELGITQKNINQVSKDTTNP 271 G + + P Sbjct: 266 ---GRANALYKKWFQSPIPP 282 >gi|253690631|ref|YP_003019821.1| extracellular solute-binding protein family 3 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251757209|gb|ACT15285.1| extracellular solute-binding protein family 3 [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 278 Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats. Identities = 60/273 (21%), Positives = 102/273 (37%), Gaps = 17/273 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59 M K ++ L L S + A L DI+K G +K + F V G+ Sbjct: 1 MKKQIL-TVTLLAGLASISGAAQADKLDDIQKAGVVKIAVFDSNPPFGYVDPQSKKLVGY 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD A+ A+ K++ N R L S+++D+++ N T R + + Sbjct: 60 DVDIAEAIGKALG---VKVELRATNPANRIPLLSSQKVDLIAANFTITDERAKQVNFSI- 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ FI K + + + I GT E+TL +++ I ++ Sbjct: 116 -PYFATGQKFIARKG-VLKTPEDIKTLRIGADKGTVQEITLREHYPTA----KVISYDDT 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEW 237 AA R A T D + L L +E I P I+K I +G+ Sbjct: 170 PLAFAALRNGNVQAITQDDAKLVGLLANVPDAQKAEFEISPFSITKEYQGVGIPKGEERL 229 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 ++ T + E+ G + ++ +T Sbjct: 230 TAKINDTL---INLEKQGEAKTIYDRWFGPSTK 259 >gi|152968872|ref|YP_001333981.1| cysteine ABC transporter periplasmic substrate binding protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206578283|ref|YP_002240191.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Klebsiella pneumoniae 342] gi|262042357|ref|ZP_06015519.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|288936935|ref|YP_003440994.1| extracellular solute-binding protein family 3 [Klebsiella variicola At-22] gi|290510009|ref|ZP_06549379.1| cysteine transport system periplasmic binding component [Klebsiella sp. 1_1_55] gi|330006799|ref|ZP_08305702.1| ABC transporter, substrate-binding protein, family 3 [Klebsiella sp. MS 92-3] gi|150953721|gb|ABR75751.1| cysteine transport protein (ABC superfamily, peri_bind) [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206567341|gb|ACI09117.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Klebsiella pneumoniae 342] gi|259040265|gb|EEW41374.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|288891644|gb|ADC59962.1| extracellular solute-binding protein family 3 [Klebsiella variicola At-22] gi|289776725|gb|EFD84723.1| cysteine transport system periplasmic binding component [Klebsiella sp. 1_1_55] gi|328535739|gb|EGF62181.1| ABC transporter, substrate-binding protein, family 3 [Klebsiella sp. MS 92-3] Length = 269 Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats. Identities = 61/263 (23%), Positives = 97/263 (36%), Gaps = 14/263 (5%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKI 78 A L DIK G +K F V A G+DVDF +AL+ A+ K+ Sbjct: 19 SQAQADQLADIKAAGVVKVATFDANPPFGSVDAKTHHIVGYDVDFAQALAKALG---VKL 75 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + + N R LQS + D++ + T R + + GQ F++ Sbjct: 76 ELVATNPANRIPLLQSGKADLIVADITITPERAQVIDF--STPYFVTGQQFLVPAGSPDK 133 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + + S A I GTT E L F + ++ + A R A T D Sbjct: 134 -LDEYSKARIGAVKGTTGEQALHQRFPQA----RVLSYDDIPLALTALRNGNVQAITQDS 188 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 + L L ++ ILPD++SK + + +G+ V+ +V E+ G Sbjct: 189 TILAGLLAEAPDKAKFKILPDLLSKEEIGVGVKKGEPALLKAVND---ELVKLEKTGEAA 245 Query: 259 KNINQVSKDTTNPDVQRFLGIDK 281 K + T R I+ Sbjct: 246 KIYDVWFGPATKTPQPRAFTIEA 268 >gi|182683628|ref|YP_001835375.1| amino acid (glutamine) ABC transporter substrate binding protein [Streptococcus pneumoniae CGSP14] gi|182628962|gb|ACB89910.1| amino acid (glutamine) ABC transporter substrate binding protein [Streptococcus pneumoniae CGSP14] Length = 286 Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats. Identities = 57/287 (19%), Positives = 112/287 (39%), Gaps = 26/287 (9%) Query: 1 MYKDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTGLVG 46 ++K + L F + + A + +IKK G L+ + Sbjct: 3 LFKPLLTVLALAFALIFITACSSGGNAGSSSGKTTAKARTIDEIKKSGELRIAVFGDKKP 62 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F V +G ++G+D++ L+ + K++Y+ ++A R L S ++DI N Sbjct: 63 FGYVDNDGSYQGYDIELGNQLAQDLG---VKVKYISVDAANRAEYLISNKVDITLANFTV 119 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T R+ + A G + K I+ V QL G ++ V GTT E YF+ Sbjct: 120 TDERKKQVDFAL--PYMKVSLGVVSPKTGLITDVKQLEGKTLIVTKGTTAET----YFEK 173 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 ++ + +++ + A R DA++ D + + A L D V + + + Sbjct: 174 NHPEIKLQKYDQYSDSYQALLDGRGDAFSTDNTEVLAWAL--DNKGFEVGITSLGDPDTI 231 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSKDTTNPD 272 A A+ +G+ E + ++ + +K ++ D D Sbjct: 232 AAAVQKGNQELLDFINKDIEKLGKENFFHKAYEKTLHPTYGDAAKAD 278 >gi|194017138|ref|ZP_03055750.1| glutamine-binding protein (GlnBP) [Bacillus pumilus ATCC 7061] gi|194011006|gb|EDW20576.1| glutamine-binding protein (GlnBP) [Bacillus pumilus ATCC 7061] Length = 269 Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats. Identities = 55/278 (19%), Positives = 105/278 (37%), Gaps = 24/278 (8%) Query: 1 MYKD----FFVSILCLIILFFTSFSTN--------ASILGDIKKRGFLKCGINTGLVGFA 48 M K + + C I S S L I+K + G+ F Sbjct: 1 MKKMKRFGLLLFMTCCIAALAACGSAEKGSTDAKKGSSLEAIQKDKKIIFGVKNDTRLFG 60 Query: 49 EVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 +NGD +GFD+D +A++ + D K ++ + +K R LQ I + T Sbjct: 61 LKNPSNGDIEGFDIDIAKAIAKEMLGDEGKAEFKEVTSKTRIPLLQKGDIHAIVATMTIT 120 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + + + GQ ++ K I S+ L G + G+T+ + + Sbjct: 121 EERKKEVNF--SDVYFEAGQSLLVKKGSDIQSIDDLKKGTKVLAVKGSTSSQNIREKAPE 178 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + FE +E A ++++ T D + L+ + D S + ++ + P Sbjct: 179 AS----VLEFENYQEAFTALKSNQGQVLTTDNAILFGMA---DEDSNYEVVGGTFTDEPY 231 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQ 263 A+ +GD + ++ + E I QK I + Sbjct: 232 GIAVKKGDQKLTAAINKALKTLKGNGEYDKIHQKWIKE 269 >gi|48428787|gb|AAT42435.1| ABC-type amino acid transport, periplasmic component [Collimonas fungivorans Ter331] Length = 277 Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 96/254 (37%), Gaps = 7/254 (2%) Query: 7 VSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 + ++ I L + + +A +L I+ + G F+ V + G+ +D C Sbjct: 22 LGMVLAITLGVAATAVHAEDVLTKIRDSKTITIGYREASFPFSFVDQDKKPVGYAIDLCL 81 Query: 66 ALSSAIFD----DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 ++ A+ I Y+P+ + R + S +ID+ +T R + Sbjct: 82 KIADAVKQQLKLPQLNIVYVPVTSSNRIDMIASGKIDLECGSTTNNAERRKQVSFTIA-- 139 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + ++ + I + L + GTT+ +L D + ++ + E Sbjct: 140 HFMASSRMLVRVEDKIKNWPDLRDKKVATTKGTTSVKSLVDRGQVRSLNMTIVEGRDHNE 199 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 DA+ D LY LK T P+ + I+ + ++ P A + +GDT + +V Sbjct: 200 SFKMVEDKAADAFVMDDVLLYGLKATAKDPAAYAIVGEPLTTEPYAIMLPKGDTSYKAVV 259 Query: 242 SWTHYAMVTAEELG 255 ++ E+ Sbjct: 260 DREMGRIIHDGEIN 273 >gi|107100793|ref|ZP_01364711.1| hypothetical protein PaerPA_01001821 [Pseudomonas aeruginosa PACS2] gi|116049294|ref|YP_791903.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa UCBPP-PA14] gi|296390281|ref|ZP_06879756.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa PAb1] gi|115584515|gb|ABJ10530.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa UCBPP-PA14] Length = 302 Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 48/273 (17%), Positives = 93/273 (34%), Gaps = 12/273 (4%) Query: 6 FVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVD 62 +S + L + L IK G + G + F+ + G G+ D Sbjct: 7 LLSTAIVAALLSAPVVADELTGTLKKIKDTGTITLGHRDASIPFSYLGTEPGKPIGYSHD 66 Query: 63 FCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 + A+ + + K++Y + ++ R +Q+ +DI +T R+ + + Sbjct: 67 LQLKVVEAVKKELNLPDLKVRYNLVTSQTRIPLVQNGTVDIECGSTTNNEERQKQVDFSV 126 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + G + K I L G ++ AGTT+E L M + I + Sbjct: 127 GI--FEVGTRLLSKKTANIKDFDDLKGKNVVTTAGTTSERLLKAMNADKKMGMNIISAKD 184 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E + R A+ D + LY +P + V+ S + +GD + Sbjct: 185 HGESFMMLESGRAVAFMMDDALLYGEMAKAKKPDDWVVGGTPQSFEIYGCMVRKGDAAFK 244 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 +V + E+ K ++ P Sbjct: 245 KVVDKAITDTYASGEVN---KIYDKWFTQPIPP 274 >gi|320547237|ref|ZP_08041530.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus equinus ATCC 9812] gi|320448125|gb|EFW88875.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus equinus ATCC 9812] Length = 279 Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 67/281 (23%), Positives = 122/281 (43%), Gaps = 22/281 (7%) Query: 1 MYKDFFVSILCL----IILFFTSFSTNASI----LGDIKKRGFLKCGINTGLVGFAEVKA 52 M K +++L + FFT+ T A + I+ G LK G+ + F A Sbjct: 10 MKKKICLAVLASLSLLFMSFFTASKTFADTTSEQIKKIQDAGVLKVGVKQDVPNFGYYSA 69 Query: 53 -NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 +G ++G ++D + ++ + K+ Y + + R L + QID+L T R+ Sbjct: 70 ESGKYEGMEIDLAKKIAKTLG---VKVAYTAVTTQTREALLDNGQIDLLIATYTITDERK 126 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 S A Y+D GF+++ KG+ ++S L G +I V G+TT+LT+ +Y KAHN+K+ Sbjct: 127 AS--YAISNPYYYDEIGFLVNTGKGLKTISDLDGKTIGVAQGSTTKLTIEEYGKAHNLKF 184 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + E+ + A R DA++ D S L + I+ + + A Sbjct: 185 KFVQLGSFPELAISLHAKRIDAFSVDKSILTGYVSK-----KTTIINEGFNTQEYGIAAK 239 Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272 + + E + V+ G QK ++ + + Sbjct: 240 KSNQEVIDYVNSLLDDWKA---DGSLQKLYDKYNLKPAKAE 277 >gi|148989071|ref|ZP_01820471.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus pneumoniae SP6-BS73] gi|149010672|ref|ZP_01832043.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus pneumoniae SP19-BS75] gi|147765153|gb|EDK72082.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus pneumoniae SP19-BS75] gi|147925568|gb|EDK76645.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus pneumoniae SP6-BS73] Length = 286 Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 57/287 (19%), Positives = 112/287 (39%), Gaps = 26/287 (9%) Query: 1 MYKDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTGLVG 46 ++K + L F + + A + +IKK G L+ + Sbjct: 3 LFKPLLTVLALAFALIFITACSSGGNAGSSSGKTTAKARTIDEIKKSGELRIAVFGDKKP 62 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F V +G ++G+D++ L+ + K++Y+ ++A R L S ++DI N Sbjct: 63 FGYVDNDGSYQGYDIELGNQLAQDLG---VKVKYISVDAANRAEYLISNKVDITLANFTV 119 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T R+ + A G + K I+ V QL G ++ V GTT E YF+ Sbjct: 120 TDERKKQVDFAL--PYMKVSLGVVSPKTGLITDVKQLEGKTLIVTKGTTAET----YFEK 173 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 ++ + +++ + A R DA++ D + + A L N V + + + Sbjct: 174 NHPEIKLQKYDQYSDSYQALLDGRGDAFSTDNTEVLAWALENK--GFEVGITSLGDPDTI 231 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSKDTTNPD 272 A A+ +G+ E + ++ + +K ++ D D Sbjct: 232 AAAVQKGNQELLDFINKDIEKLGKENFFHKAYEKTLHPTYGDAAKAD 278 >gi|327474725|gb|EGF20130.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK408] gi|327490282|gb|EGF22070.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK1058] Length = 270 Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 54/253 (21%), Positives = 102/253 (40%), Gaps = 11/253 (4%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSK 77 + S+ + + DI+KRG L G+ + F + + + + G ++D + ++ + K Sbjct: 27 ADSSTSQQVKDIQKRGVLNVGVKQDVPNFGYLNPDSNTYSGIEIDIAKKIAKELG---VK 83 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 I Y+P+ A+ R L + Q+D++ T R F Y D GF+++K I Sbjct: 84 INYVPVTAQTRGPLLDNGQVDMVIATFTITDER--KEIYNFTTPYYTDASGFLVNKSSKI 141 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 V L+ +I V G+ T+ L + + + + + E+ + RAHR DA + D Sbjct: 142 KDVKDLNNKTIGVVQGSITQTLLEEIAQEKKLNFKYVELGSYPELAVSLRAHRIDAISVD 201 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 S L + IL K+ + +T+ + V L Sbjct: 202 KSILTGYVSSKSN-----ILDYSFKKADYGVVTKKSNTQLNDYVDGLISKWKENGSLQKL 256 Query: 258 QKNINQVSKDTTN 270 + D+T+ Sbjct: 257 YDKYDLKPSDSTD 269 >gi|307704540|ref|ZP_07641447.1| ABC transporter substrate-binding protein [Streptococcus mitis SK597] gi|307621905|gb|EFO00935.1| ABC transporter substrate-binding protein [Streptococcus mitis SK597] Length = 288 Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 59/289 (20%), Positives = 112/289 (38%), Gaps = 28/289 (9%) Query: 1 MY--KDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTGL 44 M K + L F + + A + +IKK G L+ + Sbjct: 1 MKLLKPLLTVLALAFALIFVTACSSGGNAGSSSGKTTAKARTIDEIKKSGELRIAVFGDK 60 Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 F V +G ++G+D++ L+ + K++Y+ ++A R L S ++DI N Sbjct: 61 KPFGYVDNDGSYQGYDIELGNQLAQDLG---VKVKYVSVDAANRAEYLISNKVDITLANF 117 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164 T R+ + A G + K I+ V QL G ++ V GTT E YF Sbjct: 118 TVTDERKKQVDFAL--PYMKVSLGVVSPKTGLITDVKQLEGKTLIVTKGTTAET----YF 171 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 + ++ + +++ + A R DA++ D + + A L N V + + Sbjct: 172 EKNHPEIKLQKYDQYSDSYQALLDGRGDAFSTDNTEVLAWALENK--GFEVGITSLGDPD 229 Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSKDTTNPD 272 +A A+ +G+ E + ++ + +K ++ D T D Sbjct: 230 TIAAAVQKGNQELLDFINKDIEKLGKENFFHKAYEKTLHPTYGDATKAD 278 >gi|77459314|ref|YP_348821.1| extracellular solute-binding protein [Pseudomonas fluorescens Pf0-1] gi|77383317|gb|ABA74830.1| amino acid ABC transporter substrate-binding protein, PAAT family [Pseudomonas fluorescens Pf0-1] Length = 282 Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 55/279 (19%), Positives = 107/279 (38%), Gaps = 10/279 (3%) Query: 1 MYKDFFVSILCLIILFFTSF-----STNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M++ + C+ +L +S S L + RG L G + + A+G Sbjct: 1 MHRRPSLFKACVFVLAASSAVMGIAQAADSKLDSVLARGKLIVGTGSTNAPWHFQGADGK 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +GFD+D R ++ +F+DPSK++++ ++ R L + ++D+ + T R + Sbjct: 61 LQGFDIDIARMVAKGLFNDPSKVEFVVQSSDARIPNLLTDKVDMSCQFITVTASRAQQVA 120 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 Y +G G ++ + L V + + K Sbjct: 121 FTL--PYYREGVGLLLPNNSKYKEIEDLQAGGDGVTVAVLQNVYAEELVHQALPKAKVDQ 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 ++ V+ + A + R DA D S++ L + P + S A A+ +GD Sbjct: 179 YDSVDLMYQAVNSGRADAAATDQSSVKYLMVQ--NPGRYRSPTYAWSPQTYACAVKRGDQ 236 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSK-DTTNPDV 273 +W N V+ + +T E + Q D +P + Sbjct: 237 DWLNFVNTALHEAMTGVEFPTYAASFKQWFGVDLPSPAI 275 >gi|167588750|ref|ZP_02381138.1| extracellular solute-binding protein family 3 [Burkholderia ubonensis Bu] Length = 302 Score = 194 bits (494), Expect = 2e-47, Method: Composition-based stats. Identities = 49/251 (19%), Positives = 84/251 (33%), Gaps = 9/251 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQY 80 L IK G + GI V F+ G+ D + + + ++ Sbjct: 31 GTLKKIKDTGVVSLGIRESSVPFSYSDNQQKNIGYSRDIASRIVEQLKTELNLPGLAVKE 90 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +P+ ++ R LQ+ ID +T TL R+ + Y G F K G+ Sbjct: 91 IPITSQNRIPLLQNGTIDFECGSTTNTLERQKQAAFSNSIFLY--GIRFSTRKDSGVKDF 148 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L+G ++ AGT+ E L + M I + E R A+ D Sbjct: 149 PDLAGKTVATTAGTSDERLLRKLNEEKGMNMTIISAKDHAEAFMNVTTGRAVAFVMDEPL 208 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 LY + P + + + A + + D + +V M T+ G +K Sbjct: 209 LYGELAKDRNPGAYTVTGTPLVHENYACMMRRDDPAFKRVVDGVIAKMQTS---GDAEKL 265 Query: 261 INQVSKDTTNP 271 + P Sbjct: 266 YGRWFTQPIPP 276 >gi|328462032|gb|EGF34212.1| glutamine ABC transporter [Lactobacillus helveticus MTCC 5463] Length = 272 Score = 194 bits (494), Expect = 2e-47, Method: Composition-based stats. Identities = 53/279 (18%), Positives = 107/279 (38%), Gaps = 17/279 (6%) Query: 1 MYKDFFVSILCLIILFFT----SFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55 M K FF+S L + I FT S + ++ +K + G+ F + G Sbjct: 1 MKKRFFLSTLLIGIALFTLSACSQNKKQNVYQTVKSTKTINWGVKADTPLFGSMNIKTGK 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GF++D +AL+ + +K ++ A + L+++ +D + T RE + Sbjct: 61 INGFEIDLAKALTKEMLGKNAKANFVTTTANTKIQLLKNRNVDAVIAAMTITPEREKQVN 120 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + GQ ++ K I +V L+ + V GTT + + + Sbjct: 121 F--SKPYFPAGQSIMVAKNNKIKNVKDLNNKKVLVVKGTTAADAVKKFAPKA----EILQ 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F+ + A +A + DA+ D L + S + ++ + P A+ +G T Sbjct: 175 FDDYGQAFTALKAGQGDAFVTDNGILVGI---LRDSSGYKLVGGNFTNQPYGIAVNKGQT 231 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 E + A+ E+ G + + + + +V+ Sbjct: 232 EMD---KQINLALTKLEKDGTYNRLLKKWFGNIPGFNVK 267 >gi|260102758|ref|ZP_05752995.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus helveticus DSM 20075] gi|260083428|gb|EEW67548.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus helveticus DSM 20075] Length = 272 Score = 194 bits (494), Expect = 2e-47, Method: Composition-based stats. Identities = 53/279 (18%), Positives = 107/279 (38%), Gaps = 17/279 (6%) Query: 1 MYKDFFVSILCLIILFFT----SFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55 M K FF+S L + I FT S + ++ +K + G+ F + G Sbjct: 1 MKKRFFLSTLLIGIALFTLSACSQNKKQNVYQTVKSTKTINWGVKADTPLFGSMNIKTGK 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GF++D +AL+ + +K ++ A + L+++ +D + T RE + Sbjct: 61 INGFEIDLAKALTKEMLGKNAKANFVTTTANTKIQLLKNRNVDAVIAAMTITPEREKQVD 120 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + GQ ++ K I +V L+ + V GTT + + + Sbjct: 121 F--SKPYFPAGQSIMVAKNNKIKNVKDLNNKKVLVVKGTTAADAVKKFAPKA----EILQ 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F+ + A +A + DA+ D L + S + ++ + P A+ +G T Sbjct: 175 FDDYGQAFTALKAGQGDAFVTDNGILVGI---LRDSSGYKLVGGNFTNQPYGIAVNKGQT 231 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 E + A+ E+ G + + + + +V+ Sbjct: 232 EMD---KQINLALTKLEKDGTYNRLLKKWFGNIPGFNVK 267 >gi|50123386|ref|YP_052553.1| extracellular solute-binding protein [Pectobacterium atrosepticum SCRI1043] gi|49613912|emb|CAG77365.1| extracellular solute-binding protein [Pectobacterium atrosepticum SCRI1043] Length = 278 Score = 194 bits (494), Expect = 2e-47, Method: Composition-based stats. Identities = 60/278 (21%), Positives = 102/278 (36%), Gaps = 17/278 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59 M K ++ L L S + A L DI+K G +K + F V G+ Sbjct: 1 MKKQIL-TVTLLAGLASVSGAAQADKLDDIQKAGVVKIAVFDSNPPFGYVDPQSKKLVGY 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD A+ A+ K++ N R L S+++D+++ N T R + + Sbjct: 60 DVDIAEAIGKALG---VKVELRATNPANRIPLLSSQKVDLIAANFTITDERAKQVNFSL- 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ FI K + + + I GT E+TL +++ I ++ Sbjct: 116 -PYFATGQKFIARKG-VLKTPDDIKTLRIGADKGTVQEITLREHYPTA----KVISYDDT 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEW 237 A R A T D + L L +E I P I+K I +G+ Sbjct: 170 PLAFVALRNGNVQAITQDDAKLVGLLANVPDAQKAEFEISPFSITKEYQGVGIPKGEERL 229 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 ++ T + E+ G + ++ +T R Sbjct: 230 TAKINDTL---INLEKQGEAKTIYDRWFGPSTKSSQPR 264 >gi|221214829|ref|ZP_03587798.1| glutamate/aspartate periplasmic-binding protein [Burkholderia multivorans CGD1] gi|221165368|gb|EED97845.1| glutamate/aspartate periplasmic-binding protein [Burkholderia multivorans CGD1] Length = 301 Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats. Identities = 45/252 (17%), Positives = 90/252 (35%), Gaps = 9/252 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQ 79 + L I++ + G V F+ V A+G GF D C + +A+ K ++ Sbjct: 29 SGTLEKIRQTNLISIGHRETSVPFSYVDASGKVIGFSQDLCDRVIAAVKARTGKPDLQVR 88 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 ++P+ ++ R +Q+ +D+ T R + + + + GI Sbjct: 89 FIPVTSQNRIPLVQNGTVDLECGVTTNLAARHAQVAF--STTFFVATTRLLTRTQSGIRD 146 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L+G ++ GTT+E L + M I + E + R AY D Sbjct: 147 FPDLAGKTVVTNQGTTSERLLRKMNEEKKMNMQIISAKDYGEGRLTLESGRAAAYMMDDV 206 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L ++ +P++ I+ S + + D ++ +V V + G Sbjct: 207 LLAGVRQLAAKPADWRIVGTPQSSEAYGFMLRKDDPQFKALVDSVL---VQLMKRGEIDA 263 Query: 260 NINQVSKDTTNP 271 ++ P Sbjct: 264 LYDKWFMKPVPP 275 >gi|300690825|ref|YP_003751820.1| amino-acid-binding periplasmic abc transporter protein [Ralstonia solanacearum PSI07] gi|299077885|emb|CBJ50524.1| putative amino-acid-binding periplasmic abc transporter protein [Ralstonia solanacearum PSI07] Length = 285 Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats. Identities = 59/268 (22%), Positives = 106/268 (39%), Gaps = 15/268 (5%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA--NGDWKGFDVDF 63 + + + A L DIKK+G L CG+ F+ +K + + G+DVD Sbjct: 14 LACAAIVAAVTLAAVPAKADQLADIKKKGELVCGVLGTDEPFSFLKDPMSREIVGYDVDM 73 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 C A++ + P L R LQ ++D+L+ + RE + + T+ Sbjct: 74 CNAVAKRLGVKPV---LKQLAVAARIPELQQGRVDLLAASLTHNKEREAQIDFSVS--TF 128 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 GQ ++ K GI+S++QL G + G+T E +A K + + F+ + Sbjct: 129 ITGQKAMVRKDSGITSLAQLDGKKVLTVKGSTMEANIAKTVKNAD----IVSFDNSPQAL 184 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPS-EHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A + + AY D + L S ++ I+ +S LA + + + V+ Sbjct: 185 LALQQGKGAAYVNDETTLVGNMAKLGAASRDYAIVAQNLSTEHLALGLRKNEPALREQVN 244 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTN 270 + E G QK ++ T Sbjct: 245 KVL---LDLEASGEAQKLYDKWFGPGTK 269 >gi|300718266|ref|YP_003743069.1| polar amino acid ABC transporter, periplasmic ligand binding protein [Erwinia billingiae Eb661] gi|299064102|emb|CAX61222.1| polar amino acid ABC transporter, periplasmic ligand binding protein [Erwinia billingiae Eb661] Length = 271 Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats. Identities = 64/245 (26%), Positives = 102/245 (41%), Gaps = 9/245 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M ++ +++ L +L T+A L DIK RG L GI + + A G GF+ Sbjct: 1 MKRNR--ALMALSLLIMAPVITHADTLSDIKSRGVLTVGIKNDYPPYGFMNAEGKTVGFE 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD R++++ + P KI+ +P+NA R LQS QID++ T R + Sbjct: 59 VDLARSIAANLLGSPDKIKLVPVNASNRIQFLQSGQIDLIMATLGVTPERAKEIDFTVEY 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 ++ G + K+ + QL G IC G+ TL + F + Sbjct: 119 VS-AAGPSVMARKEAKFNQWEQLKGQKICGIQGSYYNKTLTQ-----KYGIQLVNFTALP 172 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E A + +RC A D L KL S++ I P+A + +GD + N Sbjct: 173 EAYRALQDNRCVAMVFDDMTLQN-KLGEPGWSDYKIAIKPYEFLPMAGGLRKGDEAFKNA 231 Query: 241 VSWTH 245 V+ Sbjct: 232 VNAAI 236 >gi|52425739|ref|YP_088876.1| ArtI protein [Mannheimia succiniciproducens MBEL55E] gi|52307791|gb|AAU38291.1| ArtI protein [Mannheimia succiniciproducens MBEL55E] Length = 286 Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats. Identities = 57/253 (22%), Positives = 108/253 (42%), Gaps = 9/253 (3%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 ++ + S + IKK ++ G+ + F V +G +GFDV+ +A++ + D Sbjct: 30 AASADNNAVSAIERIKKADKVRIGVFSDKPPFGYVDKDGKVQGFDVEIAKAVTKDLLGDE 89 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 +K +++ + A R L S ++DI N T R+ + A G + + Sbjct: 90 NKAEFVLVEAANRAEYLLSNKVDITMANFTVTPERKEVVNFA--KPYMKVALGVVSKQDA 147 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I+ V+QL+ ++ + GTT + YF + K + FE+ E A R DA + Sbjct: 148 PITDVAQLADKTLLLNKGTTADA----YFTKNFPKNKSLKFEQNTETFQALLDGRGDALS 203 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D + L+A + P V + ++ +APA+ + DT+ + + L Sbjct: 204 HDNTLLFAWAK--ENPGYVVAIKNLGDLDYIAPAVKKEDTDLLQWLDGEIEKLAKDGTLN 261 Query: 256 -ITQKNINQVSKD 267 QK + + D Sbjct: 262 KAYQKTLQPIYGD 274 >gi|257866174|ref|ZP_05645827.1| extracellular solute-binding protein [Enterococcus casseliflavus EC30] gi|257872505|ref|ZP_05652158.1| extracellular solute-binding protein [Enterococcus casseliflavus EC10] gi|257875809|ref|ZP_05655462.1| extracellular solute-binding protein [Enterococcus casseliflavus EC20] gi|257800108|gb|EEV29160.1| extracellular solute-binding protein [Enterococcus casseliflavus EC30] gi|257806669|gb|EEV35491.1| extracellular solute-binding protein [Enterococcus casseliflavus EC10] gi|257809975|gb|EEV38795.1| extracellular solute-binding protein [Enterococcus casseliflavus EC20] Length = 269 Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats. Identities = 51/272 (18%), Positives = 104/272 (38%), Gaps = 19/272 (6%) Query: 1 MYKDFFVSILCLIILFFTSF-----STNASILGDIKKRGFLKCGINTGLVGFAEVK-ANG 54 M K F ++ L S + IL + K+ + G+ F + A Sbjct: 1 MRKKIFSFLVLAFALVTFSGCKGQSAAEIDILENSKETNQIVWGVKNDTRLFGLMDIATR 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + +GFD+D RA++ I ++ + +K R L++ ID + T R+ + Sbjct: 61 EVRGFDIDIARAITEKILGRDGNAIFVEVTSKTRIPLLKNGNIDAIIATMTITEERKKQV 120 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHP 173 + + GQ ++ K I + L + ++ V G+T+ + + + Sbjct: 121 DF--SDVYFDAGQSLLVAKDSPIQGIEDLTADTTVLVVKGSTSAVNIREAAPEAQ----I 174 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + E E A ++ + DA T D + L + N + ++ + ++ P AI +G Sbjct: 175 LELENYAEAFTALQSGQGDAMTTDNAILLGMASENPN---YHLVGETFTEEPYGIAINKG 231 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 + + V+ M E G + N+ Sbjct: 232 QKPFLDAVNQALREM---REDGTYDEIYNKWF 260 >gi|327463114|gb|EGF09435.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK1] Length = 270 Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats. Identities = 55/246 (22%), Positives = 103/246 (41%), Gaps = 14/246 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSK 77 + S+ + + DI+KRG L G+ + F + + + + G ++D + ++ + K Sbjct: 27 ADSSTSQQVKDIQKRGVLNVGVKQDVPNFGYLNPDSNTYSGIEIDIAKKIAKELG---VK 83 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 I Y+P+ A+ R L + Q+D++ T R F Y D GF+++K I Sbjct: 84 INYVPVTAQTRGPLLDNGQVDMVIATFTITDER--KEIYNFTTPYYTDASGFLVNKSSKI 141 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 V L+ +I V G+ T+ L + + + + + E+ + RAHR DA + D Sbjct: 142 KDVKDLNNKTIGVVQGSITQTLLEEIAQEKKLNFKYVELGSYPELAVSLRAHRIDAISVD 201 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 S L + IL K+ + +T+ + V +E G Sbjct: 202 KSILTGYVSSKSN-----ILDYSFKKADYGVVTKKSNTQLNDYVDGLISKW---KENGSL 253 Query: 258 QKNINQ 263 QK ++ Sbjct: 254 QKIYDK 259 >gi|300705512|ref|YP_003747115.1| glutamate/aspartate ABC transporter periplasmic-binding protein [Ralstonia solanacearum CFBP2957] gi|299073176|emb|CBJ44534.1| glutamate/aspartate transport protein; ABC superfamily, periplasmic binding component [Ralstonia solanacearum CFBP2957] Length = 301 Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats. Identities = 42/251 (16%), Positives = 86/251 (34%), Gaps = 7/251 (2%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 L I+ + G+ + F+ + GF D C + A+ K Sbjct: 23 AQAQALDGTLKKIQDSNTILIGVREASIPFSYRDSKNQIVGFSADLCARVIEAVKQKVGK 82 Query: 78 ----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 +Q +P+ ++ R +Q+ +D+ T RE + + Sbjct: 83 PDLQVQQIPVTSQNRTALVQNGSVDLECGVTTHLKSREQQTAF--STTFFIAATRLLTSV 140 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 G+ L+G S+ AGTT+E L M + + + E ++ R A Sbjct: 141 NSGVKDFPDLAGKSVITNAGTTSERILRKMNDEKKMNMNVVSGKDYGESFLTLQSGRVQA 200 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 + D L + +P++ V+ S + + D ++ +V T ++ E Sbjct: 201 FMMDDVLLAGARTLAQKPADWVVTGTPQSFEAYGFMLRRDDPQFKKLVDDTLTGVMKRGE 260 Query: 254 LG-ITQKNINQ 263 + + K + Sbjct: 261 INTLYAKWFEK 271 >gi|329667258|gb|AEB93206.1| ABC transporter solute-binding component [Lactobacillus johnsonii DPC 6026] Length = 284 Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats. Identities = 73/290 (25%), Positives = 117/290 (40%), Gaps = 30/290 (10%) Query: 1 MYKDFFV--SILCLIILFFTSFSTNA--------------SILGDIKKRGFLKCGINTGL 44 M K F+ I + IL + + A S + IKKRG LK + L Sbjct: 1 MKKRKFIKKLIAAVGILAVGAVTLTACSNNSSSSSSSNNPSSVAAIKKRGTLKVAVFGDL 60 Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 + V +G G+DV R L+ + K++++ +NA R L + + DI+ N Sbjct: 61 PPYGWVNKDGKRVGYDVRLARELAKEMG---VKVKFVQVNANNRVDTLNANKADIVLANF 117 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164 T R+ + A G + K K I++V+QL G + V GTT E +YF Sbjct: 118 TVTPERKQVVDFA--KPYMKVSVGVVSPKSKPITNVNQLKGKKVIVTKGTTAE----NYF 171 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 + + F+ + A + R A D S LYA P V + + S Sbjct: 172 TSKQPDVDLLKFDSKTQQFNAMKNGRAAALADDNSYLYAWVKN--NPKYTVGIKHLGPNS 229 Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 +APA+ +G+ + WT+ + + G + NQ K DV+ Sbjct: 230 YIAPAVKKGNKSLLD---WTNKHINKLNKDGFFINDYNQELKPYFGDDVK 276 >gi|170748630|ref|YP_001754890.1| extracellular solute-binding protein [Methylobacterium radiotolerans JCM 2831] gi|170655152|gb|ACB24207.1| extracellular solute-binding protein family 3 [Methylobacterium radiotolerans JCM 2831] Length = 267 Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats. Identities = 62/277 (22%), Positives = 101/277 (36%), Gaps = 17/277 (6%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK-GFD 60 + F L +++ ++ A L I++ G L+ F V G D Sbjct: 1 MRRLFAFALAIVL---SAGPALADRLDAIRQAGVLRVAAFDSNPPFGFVDPATKRINGLD 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V++ +A++ A+ K++ P N R L S ++D++ N T R + L F Sbjct: 58 VEYAQAIADALG---VKLEVRPTNPANRIPLLTSGKVDLVLANFTITDER--AKQLDFSI 112 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + GQ F+ K +SS QL+G I GTT E+ L F + F+ Sbjct: 113 PYFASGQQFLAKKGT-LSSPEQLNGLRIGADKGTTNEIVLRRDFPRAI----VVAFDDTP 167 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A R A T D L L + I IS + I +G+T ++ Sbjct: 168 FAFTALRNGNVQAITQDGPKLVGLLAKVPDRENYEIPAFSISNDYIGVGIPKGETRLRDL 227 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277 V+ T E G ++ T + R Sbjct: 228 VNETLRG---LEASGRAAAIYDRWFGPETEQPLPRLF 261 >gi|271502694|ref|YP_003335720.1| family 3 extracellular solute-binding protein [Dickeya dadantii Ech586] gi|270346249|gb|ACZ79014.1| extracellular solute-binding protein family 3 [Dickeya dadantii Ech586] Length = 278 Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats. Identities = 63/272 (23%), Positives = 102/272 (37%), Gaps = 17/272 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59 M K L L L + + A L DI+K G +K + F V G+ Sbjct: 1 MKKPLLAFSL-LAGLVSLAGNAQADKLDDIQKAGVVKVAVFDSNPPFGYVDPQSKKLVGY 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD +A+ +A+ K++ N R L SK++D+++ N T R + Sbjct: 60 DVDVAQAIGNALG---VKVELRATNPANRIPLLTSKKVDLIAANFTITDERAKQVNF--S 114 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ FI K + + L I GT E+TL +++ I ++ Sbjct: 115 VPYFATGQKFIARKG-VLKTPDDLKNLRIGADKGTVQEITLREHYPTA----KVISYDDT 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALK--LTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 AA R A T D + L L L + ++ I P I+K + +G+ Sbjct: 170 PLAFAALRNGNVQAITQDDAKLVGLLGNLAPAQKADFEISPFSITKEYQGIGLPKGEDRL 229 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 V+ + E+ G K N+ T Sbjct: 230 TQKVNDIL---LNLEKQGDAVKIYNRWFGPQT 258 >gi|152985923|ref|YP_001349397.1| putative ABC transporter binding protein subunit [Pseudomonas aeruginosa PA7] gi|150961081|gb|ABR83106.1| probable binding protein component of ABC transporter [Pseudomonas aeruginosa PA7] Length = 302 Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats. Identities = 48/273 (17%), Positives = 93/273 (34%), Gaps = 12/273 (4%) Query: 6 FVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVD 62 +S + L + L IK G + G + F+ + G G+ D Sbjct: 7 LLSTAIVAALLSAPVVADELTGTLKKIKDTGTITLGHRDASIPFSYLGVEPGKPIGYSHD 66 Query: 63 FCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 + A+ + + K++Y + ++ R +Q+ +DI +T R+ + + Sbjct: 67 LQLKVVEAVKKELNLPDLKVRYNLVTSQTRIPLVQNGTVDIECGSTTNNEERQKQVDFSV 126 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + G + K I L G ++ AGTT+E L M + I + Sbjct: 127 GI--FEVGTRLLSKKTANIKDFDDLKGKNVVTTAGTTSERLLKAMNADKKMGMNIISAKD 184 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E + R A+ D + LY +P + V+ S + +GD + Sbjct: 185 HGESFMMLESGRAVAFMMDDALLYGEMAKAKKPDDWVVGGTPQSFEIYGCMVRKGDAAFK 244 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 +V + E+ K ++ P Sbjct: 245 KVVDKAITDTYASGEVN---KIYDKWFTQPIPP 274 >gi|66046172|ref|YP_236013.1| extracellular solute-binding protein [Pseudomonas syringae pv. syringae B728a] gi|63256879|gb|AAY37975.1| extracellular solute-binding protein, family 3 [Pseudomonas syringae pv. syringae B728a] Length = 290 Score = 193 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 59/288 (20%), Positives = 112/288 (38%), Gaps = 28/288 (9%) Query: 2 YKDFFVSILCLIILFF-------------TSFSTNASILGDIKKRGFLKCGINTGLVGFA 48 +K V L L + S ++S L IK R L G+ + F Sbjct: 3 FKTALVLSLIAFTLLAGCDKPAEQKPVAKAAPSPSSSYLETIKARDKLIVGVFSDKPPFG 62 Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 V G + GFD D + + + D K++++ + R LQS ++D++ N T Sbjct: 63 FVNEQGQYVGFDTDLGKRFAKDLLGDEKKVEFVVVEPASRIPFLQSDKVDLILANMTVTP 122 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168 R ++ ++ + + ++ L+ + V GTT ++ L ++ Sbjct: 123 ERREAVDFTH--PNLRVAVQALVPQASPVKTLDDLASKTTIVTTGTTADIWLT----KNH 176 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 + + FE+ E A R DAY D L++ P V+ + ++P+AP Sbjct: 177 PDWKVLKFEKNSESLQALANGRGDAYAQDNLVLFSWAK--KNPGYRVLEQKLGDEAPIAP 234 Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV----SKDTTNPD 272 A+ +G+ E + W + + E K +Q + T+P+ Sbjct: 235 AVKKGNIELRD---WVNTELARLGEEKYLLKLYDQYVRPELAEGTDPN 279 >gi|324993850|gb|EGC25769.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK405] gi|324994829|gb|EGC26742.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK678] gi|325687270|gb|EGD29292.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK72] Length = 270 Score = 193 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 55/246 (22%), Positives = 104/246 (42%), Gaps = 14/246 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSK 77 + S+ + + I+KRG L G+ + F + + + + G ++D + ++ + K Sbjct: 27 ADSSTSQQVKAIQKRGVLNVGVKQDVPNFGYLNPDSNTYSGLEIDIAKKIAKELG---VK 83 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 I Y+P+ A+ R L + Q+D++ T R F P Y D GF+++K I Sbjct: 84 INYVPVTAQTRGPLLDNGQVDMVIATFTITDER--KEIYNFTPPYYTDASGFLVNKSSKI 141 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + V L+ +I V G+ T+ L + + + + + E+ + RAHR DA + D Sbjct: 142 TDVKDLNNKTIGVVQGSITQTLLEEIAQEKKLNFKYVELGSYPELAVSLRAHRIDAISVD 201 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 S L + IL K+ + +T+ + V +E G Sbjct: 202 KSILTGYVSSKSN-----ILDYSFKKADYGVVTKKSNTQLNDYVDGLISKW---KEDGSL 253 Query: 258 QKNINQ 263 QK ++ Sbjct: 254 QKIYDK 259 >gi|160895520|ref|YP_001561102.1| extracellular solute-binding protein [Delftia acidovorans SPH-1] gi|160361104|gb|ABX32717.1| extracellular solute-binding protein family 3 [Delftia acidovorans SPH-1] Length = 293 Score = 193 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 48/270 (17%), Positives = 102/270 (37%), Gaps = 13/270 (4%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD----DPSKIQY 80 L ++ G + V F+ + NG G V+ +A++ A+ K+Q+ Sbjct: 23 DTLAKVRDSGRITLAYRESSVPFSYLD-NGKPIGMTVEMSQAVAEAVKKAVNRPDLKVQW 81 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + ++ R L + ID+ +T +R + A ++ G ++ K GI + Sbjct: 82 QAVTSQNRMPLLANGTIDLECGSTTNNTVRGKEVAFAIN--HFYTGTRLLVKKSSGIKNY 139 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + L ++ + GTT L + ++ + + R A+ D Sbjct: 140 ADLKDKTVAITTGTTNLQVLRKANADKAWGMNIVMAKDHADGFLLVENDRAAAFGMDDIL 199 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L+ L T P + ++ D + P A + + D ++ +V M+ + G + Sbjct: 200 LFGLIPTAKNPGDFEVVADSLQVEPYACMLRKDDPQFKQLVDGVIGDMMKS---GAFARL 256 Query: 261 INQVSKDTTNP-DVQRFLGIDKSSNIGEAL 289 ++ P +V LG+ S + + L Sbjct: 257 YDKWFMQPIAPRNVA--LGLPMSEQLQKNL 284 >gi|169832728|ref|YP_001694168.1| amino acid ABC transporter periplasmic protein [Streptococcus pneumoniae Hungary19A-6] gi|168995230|gb|ACA35842.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus pneumoniae Hungary19A-6] Length = 288 Score = 193 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 57/287 (19%), Positives = 112/287 (39%), Gaps = 26/287 (9%) Query: 1 MYKDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTGLVG 46 ++K + L F + + A + +IKK G L+ + Sbjct: 3 LFKPLLTVLALAFALIFITACSSGGNAGSSSGKTTAKARTIDEIKKSGELRIAVFGDKKP 62 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F V +G ++G+D++ L+ + K++Y+ ++A R L S ++DI N Sbjct: 63 FGYVDNDGSYQGYDIELGNQLAQDLG---VKVKYISVDAANRAEYLISNKVDITLANFTV 119 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T R+ + A G + K I+ V QL G ++ V GTT E YF+ Sbjct: 120 TDERKKQVDFAL--PYMKVSLGVVSPKTGLITDVKQLEGKTLIVTKGTTAET----YFEK 173 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 ++ + +++ + A R DA++ D + + A L N V + + + Sbjct: 174 NHPEIKLQKYDQYSDSYQALLDGRGDAFSTDNTEVLAWALENK--GFEVGITSLGDPDTI 231 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSKDTTNPD 272 A A+ +G+ E + ++ + +K ++ D D Sbjct: 232 AAAVQKGNQELLDFINKDIEKLGKENFFHKAYEKTLHPTYGDAAKAD 278 >gi|163791025|ref|ZP_02185446.1| amino acid ABC transporter, amino acid-binding protein [Carnobacterium sp. AT7] gi|159873670|gb|EDP67753.1| amino acid ABC transporter, amino acid-binding protein [Carnobacterium sp. AT7] Length = 273 Score = 193 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 56/269 (20%), Positives = 102/269 (37%), Gaps = 22/269 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS--------------ILGDIKKRGFLKCGINTGLVG 46 M K ++ + L + F ++ + IK+ G LK G+ + Sbjct: 1 MKKRNLLATVVLSSVLFLGACSSDDDATKAGTTNNSDQVTVESIKEAGVLKVGVKEDVPN 60 Query: 47 FAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105 F + G+ +GF++D + L+ I DP I+ P+ AK R L + ++D++ Sbjct: 61 FGLKNTDTGEIEGFEIDIAKKLAEEILGDPDAIELTPVTAKTRGPLLDNGEVDMIIATFT 120 Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165 T R+ + Y D G ++ K K + + GA+I V +TT + + Sbjct: 121 VTEERKETYNFTDA--YYEDAVGLLVKKDKNYEGLKDMDGATIGVSQSSTTAEAIEAEAE 178 Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225 +++ + EI AA + R DA++ D S L IL D + Sbjct: 179 KYDIAIDFSEYATYPEIKAALDSGRVDAFSVDRSILAGYL-----DDSTEILSDRFATQD 233 Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 A + +TE + + L Sbjct: 234 YGIATKKTNTELADYTNDLITTWGEDGTL 262 >gi|307152951|ref|YP_003888335.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7822] gi|306983179|gb|ADN15060.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7822] Length = 298 Score = 193 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 56/293 (19%), Positives = 111/293 (37%), Gaps = 21/293 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 MYK ++ + L++ + + A +L I++ G + G + F V G W G+ Sbjct: 1 MYKQLAITAITLLLTITSQTPSLAGRVLDKIRQTGVITAGARKDAIPFGYVNEKGQWVGY 60 Query: 60 DVD---FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +D R + P K+Q + + + RF ++ + IDI +T T R+ + Sbjct: 61 SLDILELIRQQTEKQLGKPIKLQLVEVTPENRFAKIKDQSIDIECGSTTVTWARDKEVDF 120 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + + G ++ K + ++ L+G I V TT E + A + Sbjct: 121 SVS--YFASGTQLLVKKGSNLGTIESLAGMKIGVIPNTTNERAIKLQQPAAQ----LVTV 174 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI-ISKSPLAPAIIQGDT 235 + E D + D L LK T + I+P+ A I Q ++ Sbjct: 175 KDRFEGLQKLEKGEIDGFASDGIVLQGLKRTVKNGNSLEIVPEYPYMYESYACVIPQDES 234 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEA 288 +W ++V+++ + GI ++ V+ +R+ G + Sbjct: 235 QWRDLVNYSLVQYME----GIVSDQMSSVAI------YERWFGQNGKVPYSRD 277 >gi|322376967|ref|ZP_08051460.1| CjaA protein [Streptococcus sp. M334] gi|321282774|gb|EFX59781.1| CjaA protein [Streptococcus sp. M334] Length = 288 Score = 193 bits (492), Expect = 3e-47, Method: Composition-based stats. Identities = 58/289 (20%), Positives = 111/289 (38%), Gaps = 28/289 (9%) Query: 1 MY--KDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTGL 44 M K + L F + + A + +IKK G L+ + Sbjct: 1 MKLLKPLLTVLALAFALIFVTACSSGGNASSSSGKTTAKARTIDEIKKSGELRIAVFGDK 60 Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 F V +G ++G+D++ L+ + K++Y+ ++A R L S ++DI N Sbjct: 61 KPFGYVDNDGSYQGYDIELGNQLAQDLG---VKVKYVSVDAANRAEYLISNKVDITLANF 117 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164 T R+ + A G + K I+ V QL G ++ V GTT E YF Sbjct: 118 TVTDERKKQVDFAL--PYMKVSLGVVSPKTGLITDVKQLEGKTLIVTKGTTAET----YF 171 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 + + + +++ + A R DA++ D + + A L N V + + + Sbjct: 172 EKKHPEIKLQKYDQYSDSYQALLDGRGDAFSTDNTEVLAWALENK--GFEVGITSLGNPD 229 Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSKDTTNPD 272 +A A+ +G+ E + ++ + +K ++ D D Sbjct: 230 TIAAAVQKGNQELLDFINKDIEKLGKENFFHKAYEKTLHPTYGDAAKAD 278 >gi|291460387|ref|ZP_06599777.1| CjaA protein [Oribacterium sp. oral taxon 078 str. F0262] gi|291416954|gb|EFE90673.1| CjaA protein [Oribacterium sp. oral taxon 078 str. F0262] Length = 298 Score = 193 bits (492), Expect = 3e-47, Method: Composition-based stats. Identities = 54/254 (21%), Positives = 108/254 (42%), Gaps = 12/254 (4%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 S + + +I+ G ++ G+ T F + + G+ +G+DV + R ++ + K + Sbjct: 44 GSASFRTVEEIRNSGVIRIGVFTDKAPFGYIDSKGENQGYDVFYARRIAEDLG---VKAE 100 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 + L+ R + + +IDI N T R + A G + + K I S Sbjct: 101 FTSLDPASRVEYVSTGKIDITLANFTVTKERAEQVDFAL--PYMKVALGVVSPEDKEIKS 158 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 V +L G ++ + GTT E YF+ ++ + ++ + A R DA++ D + Sbjct: 159 VEELKGKTLIIAKGTTAET----YFEKNHPEVKLQKYDAYADAYNALLDGRGDAFSTDNT 214 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQ 258 + A T P V + + +A A+ +G+TE + ++ A+ + Sbjct: 215 EVIAWAKT--NPGYVVGIETLGDYDTIAAAVAKGNTELLDFLNEEIRALGKENFFHKDYE 272 Query: 259 KNINQVSKDTTNPD 272 + + V D T+PD Sbjct: 273 ETLKPVFGDDTDPD 286 >gi|224824053|ref|ZP_03697161.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum 2002] gi|224603472|gb|EEG09647.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum 2002] Length = 301 Score = 193 bits (492), Expect = 3e-47, Method: Composition-based stats. Identities = 45/278 (16%), Positives = 97/278 (34%), Gaps = 12/278 (4%) Query: 1 MYKDFFV---SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K F + ++L ++ +S + L IK+ G + + F+ + + Sbjct: 1 MSKSFKLLPAAVLAFSMISVSSAAELTGTLKKIKETGAIVLAHRDAAIPFSYLDNDQKPI 60 Query: 58 GFDVDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ + A++ + + + ++ + A+ R +Q+ +D+ +T + R+ Sbjct: 61 GYSWEIANAVAERVSKELNMPSLVVRTNLVTAQTRIPLIQNGTVDLECGSTTNNVERQRQ 120 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + + + G + K G+ + L ++ AGTT E L M + Sbjct: 121 VDFSVGI--FVTGTRLLTKKTSGVKDFADLKSKNVVTTAGTTAERLLKAMNADKQMDMNI 178 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + E ++ R A+ D L + PSE I S + + Sbjct: 179 ISAKDHGESFQMLQSGRASAFIVDDVIEAGLMTISKNPSEWAITGKPQSVENYGCMLRKD 238 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 D + +V + + G K + P Sbjct: 239 DPAFKKVVDDAIKDLYKS---GAINKLYAKWFLHPIPP 273 >gi|254563286|ref|YP_003070381.1| glutamate and aspartate ABC transporter periplasmic-binding protein [Methylobacterium extorquens DM4] gi|254270564|emb|CAX26567.1| glutamate and aspartate transporter subunit ; periplasmic-binding component of ABC superfamily [Methylobacterium extorquens DM4] Length = 303 Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats. Identities = 44/247 (17%), Positives = 88/247 (35%), Gaps = 8/247 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD----DPSKIQ 79 + L +K G + G V F+ + N G+ + C ++ A+ D +++ Sbjct: 27 SGTLKKVKDTGTITIGYRDASVPFSYLDGNQKPVGYAFEICLKVADAVKAHLKLDTLEVR 86 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 P+ + R + + ID+ +T R+ + F+ + KG+ Sbjct: 87 LNPVTSATRIPLIANGTIDLECGSTTNNADRQRQAAF--TNTHFLTATRFVAKRDKGLDK 144 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L G ++ +GTT + + A + + + E R DA+ D Sbjct: 145 TDDLKGRTVVSTSGTTNIRQINEINTARGLGMRILPAKDHAEAFLMVETGRADAFVTDDV 204 Query: 200 ALYALKLTNDRPSEHVILPDIIS-KSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE-LGIT 257 L AL + P + I + S P + + D + +V A+ + E + Sbjct: 205 LLAALVAGSKTPDAYAISSEAQSRPEPYGIMLRKDDPAFKAVVDAATAALYKSPEGTALY 264 Query: 258 QKNINQV 264 +K Q Sbjct: 265 EKWFTQA 271 >gi|326317500|ref|YP_004235172.1| family 3 extracellular solute-binding protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374336|gb|ADX46605.1| extracellular solute-binding protein family 3 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 298 Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats. Identities = 46/241 (19%), Positives = 89/241 (36%), Gaps = 6/241 (2%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD--- 74 AS L IK G + G GF+ G G+ +D C + AI + Sbjct: 21 APAQEAASTLHKIKDSGAITLGHRESSFGFSYNAGTGTPVGYSIDICMRIVDAIKAELQL 80 Query: 75 -PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 I+Y + ++ R + +DI +T + R+ + P + ++ Sbjct: 81 PKLDIRYQLVTSQNRIPLVAGGTVDIECGSTTNLVERQKLVAF--SPDIFRYNVRMLVRA 138 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 GI S++ L G ++ +GTT+ L + K N+ + + + + R A Sbjct: 139 DSGIRSIADLQGKTVVATSGTTSLRLLREADKGRNLDIQQMAGKDHADSFLLVESGRAQA 198 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 + D L L T P + +I + + + + D + +V M+ + E Sbjct: 199 FVLDDILLAGLVATARNPKDFLITGEPLRTENQSLMFRKDDPAFKALVDRVVTGMMQSGE 258 Query: 254 L 254 + Sbjct: 259 M 259 >gi|42519232|ref|NP_965162.1| ABC transporter solute-binding component [Lactobacillus johnsonii NCC 533] gi|41583520|gb|AAS09128.1| ABC transporter solute-binding component [Lactobacillus johnsonii NCC 533] Length = 284 Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats. Identities = 73/290 (25%), Positives = 117/290 (40%), Gaps = 30/290 (10%) Query: 1 MYKDFFV--SILCLIILFFTSFSTNA--------------SILGDIKKRGFLKCGINTGL 44 M K F+ I + IL + + A S + IKKRG LK + L Sbjct: 1 MKKHKFIKKLIAAVGILSVGAVTLTACSNNSSSSSSSNNPSSVAAIKKRGTLKVAVFGDL 60 Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 + V +G G+DV R L+ + K++++ +NA R L + + DI+ N Sbjct: 61 PPYGWVNKDGKRVGYDVRLARELAKEMG---VKVKFVQVNANNRVDTLNANKADIVLANF 117 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164 T R+ + A G + K K I++V+QL G + V GTT E +YF Sbjct: 118 TVTPERKQVVDFA--KPYMKVSVGVVSPKSKPITNVNQLKGKKVIVTKGTTAE----NYF 171 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 + + F+ + A + R A D S LYA P V + + S Sbjct: 172 TSKQPDVDLLKFDSKTQQFNAMKNGRAAALADDNSYLYAWVKN--NPKYTVGIKHLGPNS 229 Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 +APA+ +G+ + WT+ + + G + NQ K DV+ Sbjct: 230 YIAPAVKKGNKSLLD---WTNKHINKLNKDGFFINDYNQELKPYFGDDVK 276 >gi|325062714|gb|ADY66404.1| amino acid ABC transporter, substrate binding protein [Agrobacterium sp. H13-3] Length = 297 Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats. Identities = 56/270 (20%), Positives = 101/270 (37%), Gaps = 9/270 (3%) Query: 1 MYKDFF-VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M F + + C I + L I K ++ G F+ +G+ GF Sbjct: 1 MRISVFCLFLTCFIPTAPVQAAGEGDTLRQIAKTAKIRIGYREAEPPFSYQLPDGEVTGF 60 Query: 60 DVDFCRALSSAI----FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 D CRA+S I D I+Y+ RF+ ++S +IDI T R + Sbjct: 61 STDLCRAISEDIRTQLKLDKLDIEYVKATPATRFILVRSGKIDIECAATTNNSERRKMVD 120 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F+ K+ + S++ L+G S+ +GT L + N+ + Sbjct: 121 F--SYPNFMTATQFLSRKQDNLKSLADLAGRSVTSASGTVNIEQLNAVNREKNLNISVMP 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS-KSPLAPAIIQGD 234 + EE A + A+ D L AL T++ P + + + +S P + D Sbjct: 179 TKTNEEAFELVVAGKASAFVMDGILLAALAATSENPDLYALSDETLSAPEPYGLVFRRND 238 Query: 235 TEWYNIVSWTHYAMVTAEE-LGITQKNINQ 263 + V+ + + T G+ +K + Sbjct: 239 PAFKAAVNESLRQIFTGPTIHGLYEKWFTK 268 >gi|221198481|ref|ZP_03571527.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia multivorans CGD2M] gi|221208569|ref|ZP_03581570.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia multivorans CGD2] gi|221171560|gb|EEE04006.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia multivorans CGD2] gi|221182413|gb|EEE14814.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia multivorans CGD2M] Length = 301 Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 90/252 (35%), Gaps = 9/252 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQ 79 + L I++ + G V F+ V ANG GF D C + +A+ K ++ Sbjct: 29 SGTLEKIRQNNLISIGHRETSVPFSYVDANGKVIGFSQDLCDRVIAAVKARTGKPDLQVR 88 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 ++P+ ++ R +Q+ +D+ T R + + + + GI Sbjct: 89 FIPVTSQNRIPLVQNGTVDLECGVTTNLAARHAQVAF--STTFFVATTRLLTRTQSGIRD 146 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L+G ++ GTT+E L + M I + E + R AY D Sbjct: 147 FPDLAGKTVVTNQGTTSERLLRKMNEEKKMNMQIISAKDYGEGRLTLESGRAVAYMMDDV 206 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L ++ +P++ I+ S + + D ++ +V V + G Sbjct: 207 LLAGVRQLAAKPADWQIVGTPQSSEAYGFMLRKDDPQFKALVDGVL---VQLMKRGEIDA 263 Query: 260 NINQVSKDTTNP 271 ++ P Sbjct: 264 LYDKWFMKPVPP 275 >gi|119025524|ref|YP_909369.1| solute-binding protein for glutamate_aspartate ABC transporter system [Bifidobacterium adolescentis ATCC 15703] gi|118765108|dbj|BAF39287.1| probable solute-binding protein for glutamate_aspartate ABC transporter system [Bifidobacterium adolescentis ATCC 15703] Length = 301 Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats. Identities = 59/259 (22%), Positives = 106/259 (40%), Gaps = 14/259 (5%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 T+ A L +IKK G LK + + F + +G G+D+ F L+ + Sbjct: 46 GVTTSKVTARSLDEIKKSGVLKVAVFSDKAPFGYIDKDGKNAGYDIVFAERLAKDLG--- 102 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 K++Y ++ R L S ++DI N T R+ + A G + + Sbjct: 103 VKVKYTSVDPAARVDVLTSNKVDITLANFTVTDERKEKVDFA--KPYMKVALGVVSPENA 160 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I+ VSQL G ++ + GTT E YF+ + +++ + A R DA++ Sbjct: 161 EITDVSQLKGKTLIIAKGTTAES----YFEKNEPDVKLQKYDQYADAYNALLDGRGDAFS 216 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D + + A TN V + + + +APA+ +G+ E +W + +V + Sbjct: 217 TDNTEVLAWAKTNK--GFKVGITKLGDEDTIAPAVQKGNKELL---NWINDEIVKLGKEN 271 Query: 256 ITQKNINQVSKDTTNPDVQ 274 K+ + K DV Sbjct: 272 FFHKDYEETLKPVYGSDVN 290 >gi|323525258|ref|YP_004227411.1| family 3 extracellular solute-binding protein [Burkholderia sp. CCGE1001] gi|323382260|gb|ADX54351.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1001] Length = 314 Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats. Identities = 55/305 (18%), Positives = 104/305 (34%), Gaps = 20/305 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNA--------SILGDIKKRGFLKCGINTGLVGFAEVKANG 54 + +S + L +A L + K + G V F+ AN Sbjct: 13 RRGAISAFAVFGLVALHAPNDARAAEAELTGTLLKVSKERVITIGYRDASVPFSYYDANQ 72 Query: 55 DWKGFDVDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 G+ +D + I + K++ +P+ ++ R LQ+ ID +T R Sbjct: 73 HPVGYSIDIANLIVERIKTEIKLPDLKVRTIPITSQNRISLLQNGTIDFECTSTTNNAER 132 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 + ++F + G ++ K GI + L ++ V AGTT+E L +M Sbjct: 133 --AQQVSFSNTFFVIGTRLLVRTKSGIKDFADLKDKTVVVGAGTTSEKILRKMNVEKSMN 190 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 I + E R A D + L + P ++ I+ + + Sbjct: 191 MDVISAKDHTESFLMLSTGRAKAMMMDDALLAGERAKARNPEDYEIVGTPQTYESYGCML 250 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRF-LGIDKSSNIGEAL 289 + D ++ A+ A++ G K + + P +R LG+ S + Sbjct: 251 RKNDAAMKAVMD---AAIADAQKSGAAAKLYQRWFQQPIPP--KRVNLGLPLSPRMQTLF 305 Query: 290 GLTKD 294 D Sbjct: 306 SHPDD 310 >gi|312960169|ref|ZP_07774681.1| extracellular solute-binding protein, family 3 [Pseudomonas fluorescens WH6] gi|311285663|gb|EFQ64232.1| extracellular solute-binding protein, family 3 [Pseudomonas fluorescens WH6] Length = 305 Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats. Identities = 46/263 (17%), Positives = 92/263 (34%), Gaps = 8/263 (3%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCR 65 V++ ++ + L IK G + G + F+ + +G G+ D Sbjct: 10 VTLTAALMSIPLMAAEPTGTLEKIKTSGTITLGHRDSSIPFSYIADGSGQPVGYSHDIQL 69 Query: 66 ALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + AI + ++Y + ++ R +Q+ +D+ +T T R + + Sbjct: 70 KIVEAIKQELDIPNLNVRYNLVTSQTRIPLVQNGTVDLECGSTTNTAERARQVDFSVGI- 128 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + ++ K L G ++ AG+T E L M + I + + E Sbjct: 129 -FEASTRLLVRKNSAYKDFQDLDGKNVVTTAGSTAERMLKVMNAEKKMNMNVISAKDIGE 187 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + R A+ D + L P + V+ S + +GD IV Sbjct: 188 SYQMLESGRAIAFMQDDALLAGEMAKAKNPEDWVVTGTPQSNEIYGCTMRRGDPALKKIV 247 Query: 242 SWTHYAMVTAEELG-ITQKNINQ 263 + ++ + E+ I K NQ Sbjct: 248 DDSIKSLFVSGEINAIYDKWFNQ 270 >gi|242280829|ref|YP_002992958.1| extracellular solute-binding protein family 3 [Desulfovibrio salexigens DSM 2638] gi|242123723|gb|ACS81419.1| extracellular solute-binding protein family 3 [Desulfovibrio salexigens DSM 2638] Length = 273 Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats. Identities = 60/244 (24%), Positives = 105/244 (43%), Gaps = 12/244 (4%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 I K ++ GI T + A A +W GFDVD ++ + KI +P+N K Sbjct: 28 DRIMKDKVIRVGIMTDSIPGAFYNAKKEWVGFDVDIANEIAKRLG---VKIDQVPVNNKT 84 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 R LQ +ID N R+ S+ + +FDGQ + K K S++ G Sbjct: 85 RIGFLQQGRIDASVSNMTHKRSRDKSIDFSI--TYFFDGQKMLAPKGK-FSTLKDFVGKK 141 Query: 148 ICVQAGTTTELTLADYFKAHNM-KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 + V GTT+EL + + K+ I +++ E A + R DA++ D + L Sbjct: 142 VAVMQGTTSELNVKNLLKSLGDAAPKVISYQKESECFQALQMGRVDAWSTDSTILLGYAA 201 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 P ++ ++ D S P +++ D++ + V+ +A+ + G +K N+ Sbjct: 202 QV--PGKYELVGDFFSNEPYGIGLVEDDSKLRDAVN---FALQDMWKDGTYEKIYNKWYG 256 Query: 267 DTTN 270 T Sbjct: 257 PDTK 260 >gi|154486962|ref|ZP_02028369.1| hypothetical protein BIFADO_00799 [Bifidobacterium adolescentis L2-32] gi|154084825|gb|EDN83870.1| hypothetical protein BIFADO_00799 [Bifidobacterium adolescentis L2-32] Length = 301 Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats. Identities = 59/258 (22%), Positives = 106/258 (41%), Gaps = 14/258 (5%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 T+ A L +IKK G LK + + F + +G G+D+ F L+ + Sbjct: 46 GATTSKVTARSLDEIKKSGVLKVAVFSDKAPFGYIDKDGKNAGYDIVFAERLAKDLG--- 102 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 K++Y ++ R L S ++DI N T R+ + A G + + Sbjct: 103 VKVKYTSVDPAARVDVLTSNKVDITLANFTVTDERKEKVDFA--KPYMKVALGVVSPENA 160 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I+ VSQL G ++ + GTT E YF+ + +++ + A R DA++ Sbjct: 161 EITDVSQLKGKTLIIAKGTTAES----YFEKNEPDVKLQKYDQYADAYNALLDGRGDAFS 216 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D + + A TN V + + + +APA+ +G+ E +W + +V + Sbjct: 217 TDNTEVLAWAKTNK--GFKVGITKLGDEDTIAPAVQKGNKELL---NWINDEIVKLGKEN 271 Query: 256 ITQKNINQVSKDTTNPDV 273 K+ + K DV Sbjct: 272 FFHKDYEETLKPVYGSDV 289 >gi|220924480|ref|YP_002499782.1| family 3 extracellular solute-binding protein [Methylobacterium nodulans ORS 2060] gi|219949087|gb|ACL59479.1| extracellular solute-binding protein family 3 [Methylobacterium nodulans ORS 2060] Length = 302 Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats. Identities = 51/251 (20%), Positives = 89/251 (35%), Gaps = 9/251 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQY 80 L IK+ G + G V F+ + + GF +D C + A+ K+ Y Sbjct: 31 GTLKKIKETGTIVIGYRESSVPFSYLDNDQKPIGFSMDLCGHVVEAVKKKLSLSDLKVAY 90 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 P+N+ R + + +D+ +T L R+ + + T+ ++ GISS Sbjct: 91 NPVNSATRLPLVANGTVDLECGSTANQLARQKQVAFSVS--TFVAQFKWLTRVDSGISSP 148 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L G ++ V AGT T L + ++ + E R A+ D Sbjct: 149 DDLKGRNVVVTAGTNTAQFLNKLNQEQKLQLTITQGKDHAESFLLVETGRASAFMEDDIL 208 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L +K P+ IL S P A + D + +V T + + G Sbjct: 209 LAGVKANAKEPARFKILDKAYSADPYALMFRRDDPAFKAVVDETL---IGLMKSGAFADL 265 Query: 261 INQVSKDTTNP 271 + + P Sbjct: 266 YAKWFESPIPP 276 >gi|17546976|ref|NP_520378.1| amino-acid-binding periplasmic ABC transporter protein [Ralstonia solanacearum GMI1000] gi|17429277|emb|CAD15964.1| probable amino-acid-binding periplasmic abc transporter protein [Ralstonia solanacearum GMI1000] Length = 284 Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats. Identities = 56/268 (20%), Positives = 105/268 (39%), Gaps = 15/268 (5%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA--NGDWKGFDVDF 63 + + + A L D+KK+G L CG+ F+ +K + + G+DVD Sbjct: 13 LACAAIVAAVTLAAVPAKADQLADVKKKGELVCGVLGTDEPFSFLKDPMSREIVGYDVDM 72 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 C A++ ++ P L R LQ ++D+L+ + RE + + T+ Sbjct: 73 CNAVAKSLGVKPV---LKQLAVAARIPELQQGRVDLLAASLTHNKEREAQIDFSVS--TF 127 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 GQ ++ K GI+S++QL G + G+T E + K + + F+ + Sbjct: 128 VTGQKAMVRKDSGITSLAQLDGKKVLTVKGSTMEANIGKTIKNAD----IVSFDNSPQAL 183 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPS-EHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A + + AY D + L S ++ +LP +S A + + + + V+ Sbjct: 184 LALQQGKGAAYVNDETTLVGNMAKLGAASRDYALLPQNLSTEHFALGLRKNEPAFREQVN 243 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTN 270 E G Q ++ T Sbjct: 244 KVLRG---LEASGEAQTLYDKWFGPGTK 268 >gi|227890100|ref|ZP_04007905.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus johnsonii ATCC 33200] gi|227849544|gb|EEJ59630.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus johnsonii ATCC 33200] Length = 284 Score = 193 bits (490), Expect = 4e-47, Method: Composition-based stats. Identities = 75/290 (25%), Positives = 119/290 (41%), Gaps = 30/290 (10%) Query: 1 MYKDFF-------VSILCLIILFFTSFSTNASI---------LGDIKKRGFLKCGINTGL 44 M K F V IL + + T+ S N+S + IKKRG LK + L Sbjct: 1 MKKHKFIKKLIAAVGILAVGAVILTACSNNSSSNSSSNNPSSVAAIKKRGTLKVAVFGDL 60 Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 + V +G G+DV R L+ + K++++ +NA R L + + DI+ N Sbjct: 61 PPYGWVNKDGKRVGYDVRLARELAKEMG---VKVKFVQVNANNRVDTLNANKADIVLANF 117 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164 T R+ + A G + K K I++V+QL G + V GTT E +YF Sbjct: 118 TVTSERKQVVDFA--KPYMKVSVGVVSPKSKPITNVNQLKGKKVIVTKGTTAE----NYF 171 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 + + F+ + A + R A D S LYA P V + + S Sbjct: 172 TSKQPDVDLLKFDSKTQQFNAMKNGRAAALADDNSYLYAWVKN--NPKYTVGIKHLGPNS 229 Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 +APA+ +G+ + WT+ + + G + NQ K DV+ Sbjct: 230 YIAPAVKKGNKSLLD---WTNKHINKLNKDGFFVNDYNQELKPYFGNDVK 276 >gi|57504979|ref|ZP_00370931.1| amino acid ABC transporter, amino acid-binding protein [Campylobacter coli RM2228] gi|57019251|gb|EAL55957.1| amino acid ABC transporter, amino acid-binding protein [Campylobacter coli RM2228] Length = 241 Score = 193 bits (490), Expect = 4e-47, Method: Composition-based stats. Identities = 63/229 (27%), Positives = 102/229 (44%), Gaps = 8/229 (3%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFD 73 + FTS + L IK +G L G+ + +A + A G+ KGF+VD + L+ +I Sbjct: 1 MAFTSANAAEGKLEAIKAKGELVIGVKNDVPHYALLDQATGEIKGFEVDVAKMLAKSILG 60 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 D +K++ + +NAK R L + +D + T R+ + Y D G ++ K Sbjct: 61 DENKVKLIAVNAKTRGPLLDNGSVDAVIATFTITPERKRVYNFSE--PYYQDAVGLLVLK 118 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 +K S++ ++GA+I V TT+ + K +K F I AA A R DA Sbjct: 119 EKNYKSLADMNGATIGVAQAATTKKVINTAAKKIGVKVKFSEFPDYPSIKAALDAKRIDA 178 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 ++ D S L K N+ ILPD + D + N V+ Sbjct: 179 FSVDKSILLGYKDENN-----EILPDSFDPQSYGIVTKKDDANFSNYVN 222 >gi|149003314|ref|ZP_01828203.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus pneumoniae SP14-BS69] gi|147758497|gb|EDK65495.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus pneumoniae SP14-BS69] Length = 290 Score = 193 bits (490), Expect = 4e-47, Method: Composition-based stats. Identities = 55/277 (19%), Positives = 111/277 (40%), Gaps = 28/277 (10%) Query: 1 MYKDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTGLVG 46 ++K ++ L F + + A + +IKK G L+ + Sbjct: 3 LFKPLLTVLVLAFALIFITACSSGGNAGSSSGKTTAKARTIDEIKKSGELRIAVFGDKKL 62 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F V +G ++G+D++ L+ + K++Y+ ++A R L S ++DI+ N Sbjct: 63 FGYVDNDGSYQGYDIELGNQLAQDLG---VKVKYISVDAANRAEYLISNKVDIILANFTV 119 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T R+ + A G + K I+ V QL G ++ V GTT E YF+ Sbjct: 120 TDERKKQVDFAL--PYMKVSLGVVSPKTGLITDVKQLEGKTLIVTKGTTAET----YFEK 173 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 ++ + +++ + A R DA++ D + + A L N V + + + Sbjct: 174 NHPEIKLQKYDQYSDSYQALLDGRGDAFSTDNTEVLAWALENK--GFEVGITSLGDPDTI 231 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 A A+ +G+ E + ++ + + K + Sbjct: 232 AAAVQKGNQELLDFIN---KDIEKLGKENFFHKAYEK 265 >gi|311069226|ref|YP_003974149.1| glutamine ABC transporter glutamine-binding lipoprotein [Bacillus atrophaeus 1942] gi|310869743|gb|ADP33218.1| glutamine ABC transporter (glutamine-binding lipoprotein) [Bacillus atrophaeus 1942] Length = 275 Score = 193 bits (490), Expect = 4e-47, Method: Composition-based stats. Identities = 52/244 (21%), Positives = 100/244 (40%), Gaps = 12/244 (4%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 + + L IK + G+ T F ++GD +GFD+D + L+ I D +K ++ Sbjct: 37 SKNTLEAIKDNDKIVFGVKTDTRLFGLKNPSSGDIEGFDIDIAKQLAKDIAGDENKAEFK 96 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 + +K R LQ+ ID + T R+ + + + GQ ++ K I SV Sbjct: 97 EVTSKTRIPMLQNGDIDAIVATMTITDERKKEVDF--SNVYFEAGQSLLVKKGSAIKSVK 154 Query: 142 QL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L G + G+T+ + + + FE E A ++ + +A T D + Sbjct: 155 DLKKGTKVLAVKGSTSSQNIREKAPNA----TVLEFENYAEAFTALKSGQGEALTTDNAI 210 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQK 259 LY + N ++ + + P A+ +G +E ++ + M + I +K Sbjct: 211 LYGMADENK---DYQLTGKTFTDEPYGIAVKKGQSELVKEINASLKKMKSDGRYDEIYKK 267 Query: 260 NINQ 263 I + Sbjct: 268 WIKE 271 >gi|168492230|ref|ZP_02716373.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus pneumoniae CDC0288-04] gi|183573551|gb|EDT94079.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus pneumoniae CDC0288-04] Length = 288 Score = 193 bits (490), Expect = 4e-47, Method: Composition-based stats. Identities = 57/287 (19%), Positives = 112/287 (39%), Gaps = 26/287 (9%) Query: 1 MYKDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTGLVG 46 ++K + L F + + A + +IKK G L+ + Sbjct: 3 LFKPLLTVLALAFALIFITACSSGGNAGSSSGKTTAKARTIDEIKKSGELRIAVFGDKKP 62 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F V +G ++G+D++ L+ + K++Y+ ++A R L S ++DI N Sbjct: 63 FGYVDNDGSYQGYDIELGNQLAQNLG---VKVKYISVDAANRAEYLISNKVDITLANFTV 119 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T R+ + A G + K I+ V QL G ++ V GTT E YF+ Sbjct: 120 TDERKKQVDFAL--PYMKVSLGVVSPKTGLITDVKQLEGKTLIVTKGTTAET----YFEK 173 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 ++ + +++ + A R DA++ D + + A L N V + + + Sbjct: 174 NHPEIKLQKYDQYSDSYQALLDGRGDAFSTDNTEVLAWALENK--GFEVGITSLGDPDTI 231 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSKDTTNPD 272 A A+ +G+ E + ++ + +K ++ D D Sbjct: 232 AAAVQKGNQELLDFINKDIEKLGKENFFHKAYEKTLHPTYGDAAKAD 278 >gi|183602357|ref|ZP_02963723.1| probable solute-binding protein for glutamate/aspartate ABC transporter system [Bifidobacterium animalis subsp. lactis HN019] gi|219683328|ref|YP_002469711.1| solute-binding protein for glutamate/aspartate ABC transporter system [Bifidobacterium animalis subsp. lactis AD011] gi|241191289|ref|YP_002968683.1| amino acid ABC transporter periplasmic component [Bifidobacterium animalis subsp. lactis Bl-04] gi|241196695|ref|YP_002970250.1| amino acid ABC transporter periplasmic protein [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183218276|gb|EDT88921.1| probable solute-binding protein for glutamate/aspartate ABC transporter system [Bifidobacterium animalis subsp. lactis HN019] gi|219620978|gb|ACL29135.1| probable solute-binding protein for glutamate/aspartate ABC transporter system [Bifidobacterium animalis subsp. lactis AD011] gi|240249681|gb|ACS46621.1| ABC-type amino acid transport system periplasmic component [Bifidobacterium animalis subsp. lactis Bl-04] gi|240251249|gb|ACS48188.1| ABC-type amino acid transport system periplasmic component [Bifidobacterium animalis subsp. lactis DSM 10140] gi|289177405|gb|ADC84651.1| Glutamine-binding protein [Bifidobacterium animalis subsp. lactis BB-12] gi|295794282|gb|ADG33817.1| ABC-type amino acid transport system periplasmic component [Bifidobacterium animalis subsp. lactis V9] Length = 302 Score = 193 bits (490), Expect = 4e-47, Method: Composition-based stats. Identities = 57/258 (22%), Positives = 104/258 (40%), Gaps = 18/258 (6%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 S + A L +IKK G L+ + + F V +G + G+D++F +AL+ + P Sbjct: 48 STNAKARTLDEIKKSGELRVAVFSDKAPFGYVDKDGKYAGYDIEFAQALADGLGVKPV-- 105 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 Y ++ R L S ++D+ N T R + G + I Sbjct: 106 -YTSVDPAARVDVLASNKVDVTLANFTETPERAEKVDF--SKPYMKVALGIVAPDAAPIK 162 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 V L+G ++ V GTT E YF+ ++ + +++ + A R DA + D Sbjct: 163 DVKDLNGKTLIVAKGTTAET----YFEKNHPEIKLQKYDQYADAYNALLDGRGDAMSTDN 218 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI-- 256 + + A N V + +I +A A+ +G+ E + ++ +V + Sbjct: 219 TEVLAWAKANK--GYRVDVTEIGDVDVIAAAVQKGNKELLDYIND---EIVKLGKENFFH 273 Query: 257 --TQKNINQVSKDTTNPD 272 +K + V D NPD Sbjct: 274 KDFEKTLKPVYGDEVNPD 291 >gi|166367483|ref|YP_001659756.1| extracellular solute-binding protein [Microcystis aeruginosa NIES-843] gi|166089856|dbj|BAG04564.1| extracellular solute-binding protein [Microcystis aeruginosa NIES-843] Length = 299 Score = 193 bits (490), Expect = 4e-47, Method: Composition-based stats. Identities = 58/286 (20%), Positives = 110/286 (38%), Gaps = 21/286 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M + V + + + ++ S+ A + I+K G + G + F V + G W G+ Sbjct: 1 MKRTLAVMTMTVALTLTSNHSSLAGAIFDRIQKTGVITAGARKDAIPFGFVNSQGKWVGY 60 Query: 60 DVD---FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +D R + P K++ + + + RF L++ IDI +T +T RE + Sbjct: 61 SLDMLELIRKETERKLGKPIKLKIVEITPQNRFEKLKTGVIDIECGSTTFTWKRENEVDF 120 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + + G + K + + L+G I V A TT E + A + Sbjct: 121 SVS--YFAGGTQLLTRKGSNLDDIGSLAGRRIGVIANTTNEAVIKTQQPAAI----LVKV 174 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI-ISKSPLAPAIIQGDT 235 + E A D + D L L+ + P+ I+P + A + + D+ Sbjct: 175 KNRGEGLQKLEAGEIDGFASDGITLEGLRKSAKNPNNLAIVPSYPYAYESYACTLPENDS 234 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDK 281 +W + V++T + GI +Q T +R+ G + Sbjct: 235 KWRDTVNYTLLKFME----GIVS---DQQQAVTI---YERWFGEEG 270 >gi|229010071|ref|ZP_04167285.1| hypothetical protein bmyco0001_5390 [Bacillus mycoides DSM 2048] gi|229165583|ref|ZP_04293358.1| hypothetical protein bcere0007_5650 [Bacillus cereus AH621] gi|228617890|gb|EEK74940.1| hypothetical protein bcere0007_5650 [Bacillus cereus AH621] gi|228751204|gb|EEM01016.1| hypothetical protein bmyco0001_5390 [Bacillus mycoides DSM 2048] Length = 259 Score = 193 bits (490), Expect = 4e-47, Method: Composition-based stats. Identities = 52/251 (20%), Positives = 98/251 (39%), Gaps = 12/251 (4%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSK 77 + + + IKKRG L G+ F + G +GFD+D +AL+ I D K Sbjct: 17 TNTKQGGAVEQIKKRGKLVVGVKNDTNLFGLKNPSTGQVEGFDIDIAKALAKKILGDEKK 76 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++ + +K R L++ ID + T R+ + + + GQ ++ K I Sbjct: 77 LELKEVTSKTRIPMLKNGDIDAIIATMTITEERKKEVDF--SDVYFKAGQSLLVKKGSNI 134 Query: 138 SSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 S+ + G + G+T+ + + FE E A +A + D T Sbjct: 135 KSIDDIKQGVKVLAVKGSTSTNNIRQKSPEA----TVLEFENYSEAFTALKAGKGDVLTT 190 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL-G 255 D + LY + + + ++ I + P A+ +G + ++ M E Sbjct: 191 DNAILYGMAKQDSN---YEVVGKIFTDEPYGIAVQKGADDLTKEINSLLKDMKANGEYDK 247 Query: 256 ITQKNINQVSK 266 + +K I Q + Sbjct: 248 LYEKWIGQKQE 258 >gi|159027519|emb|CAO89483.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 299 Score = 193 bits (490), Expect = 4e-47, Method: Composition-based stats. Identities = 58/286 (20%), Positives = 108/286 (37%), Gaps = 21/286 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M + V + + + ++ S+ A + I+K G + G + F V + G W G+ Sbjct: 1 MKRTLAVMTMTVALTVTSNHSSLAGAIFDRIQKTGVITAGARKDAIPFGFVNSQGKWVGY 60 Query: 60 DVD---FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +D R + P K++ + + + RF L++ IDI +T +T RE + Sbjct: 61 SLDMLELIRKETERKLGKPIKLKIVEVTPQNRFEKLKTGVIDIECGSTTFTWKRENEVDF 120 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + + G + K + + L+G I V A TT E + A + Sbjct: 121 SVS--YFAGGTQLLTRKGSNLDDIGSLAGRRIGVIANTTNEAVIKTQQPAAI----LVKV 174 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI-ISKSPLAPAIIQGDT 235 + E D + D L L+ P+ I+P + A + + D+ Sbjct: 175 KSRGEGLQKLETGEIDGFASDGITLEGLRKNAKNPNNLAIVPSYPYAYESYACTLPENDS 234 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDK 281 +W + V++T + GI +Q T +R+ G D Sbjct: 235 KWRDTVNYTLLKFME----GIVS---DQQQAVTI---YERWFGEDG 270 >gi|224371421|ref|YP_002605585.1| GltI [Desulfobacterium autotrophicum HRM2] gi|223694138|gb|ACN17421.1| GltI [Desulfobacterium autotrophicum HRM2] Length = 300 Score = 193 bits (490), Expect = 4e-47, Method: Composition-based stats. Identities = 58/271 (21%), Positives = 110/271 (40%), Gaps = 17/271 (6%) Query: 1 MYKDFFVSILC----LIILFFT-----SFSTNASILGDIKKRGFLKCGINTGLVGFAEVK 51 M K V++ I+L T + + + ++L I+K G + G G V F + Sbjct: 1 MEKMMGVAVAAFYSLAILLGITGNMDHAVAGDENLLEKIEKSGEVHMGFREGSVPFGFID 60 Query: 52 ANGDWKGFDVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 NG W GF +D + + F+ P K+ P+N K R + + + + +T TL Sbjct: 61 KNGSWDGFGIDLGTEVVKDLEKKFNKPIKLVKHPMNPKTRITMVTNGMVAMGIGSTTITL 120 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168 RE + + + G ++ K ISS + + G + + +G+T + D Sbjct: 121 AREEVVDFSL--PYFLTGTRLLVPKDSPISSFADIGGKRVGMGSGSTANIKGMDRAIEQG 178 Query: 169 ---MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225 ++FE + A + + DAY D S L ++ P + I+ ++ P Sbjct: 179 LVKPACKKVLFEEHNKGFLALQQGKIDAYFTDASQLAGMRAKARNPQDWKIVGKYLTYEP 238 Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 + +G EW + V+ + M+ + Sbjct: 239 YGFILPEGQGEWRDFVNASLIHMIKDGRFEV 269 >gi|319942095|ref|ZP_08016414.1| ABC-type amino acid transport/signal transduction system [Sutterella wadsworthensis 3_1_45B] gi|319804479|gb|EFW01357.1| ABC-type amino acid transport/signal transduction system [Sutterella wadsworthensis 3_1_45B] Length = 277 Score = 193 bits (490), Expect = 4e-47, Method: Composition-based stats. Identities = 57/254 (22%), Positives = 106/254 (41%), Gaps = 18/254 (7%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 A L IK+ G + G+ + F V + G + G+DV F L+ + K++Y+ Sbjct: 29 EARPLDVIKQSGEVVIGVFSDKAPFGYVDSQGKYAGYDVYFGDRLAKDLG---VKVKYIS 85 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 ++ R L + ++DI+ N T R + A G + + I+ V Q Sbjct: 86 VDPASRVEFLVTGKVDIILANFTVTKDRAEKVDFAL--PYMKVALGVVSPESAVITDVKQ 143 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G ++ + GTT E YF+ ++ K +++ + A R DA++ D + + Sbjct: 144 LDGKTLIIAKGTTAEP----YFEKNHPKVKLQKYDQYTDAYNALLDGRGDAFSTDNTEVL 199 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI----TQ 258 A L + V +P + +APA+ +G+ + W + +V + Sbjct: 200 AWALVHK--GFKVGIPSLGDLDTIAPAVQKGNKGLLD---WINQEIVNLGKENFFHQDYA 254 Query: 259 KNINQVSKDTTNPD 272 + V T+NPD Sbjct: 255 ATLAPVYGKTSNPD 268 >gi|261839899|gb|ACX99664.1| hypothetical protein HPKB_1103 [Helicobacter pylori 52] Length = 244 Score = 193 bits (490), Expect = 5e-47, Method: Composition-based stats. Identities = 57/231 (24%), Positives = 97/231 (41%), Gaps = 9/231 (3%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F V I + S L IK+RG LK G+ + F V + G ++G+DV Sbjct: 23 FLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGQYQGYDVVIA 82 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 + ++ + D +KI+++P+ A R L++ ++DI+ N T RE + A Y Sbjct: 83 KRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKVVDFAK---PYM 139 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K I ++ +L + V GTT + YF + + FE+ E Sbjct: 140 KVALGVVSKDGVIKNIEELKDKELIVNKGTTADF----YFTKNYPNIKLLKFEQNTETFL 195 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 A + A D + L A P + + + K +APAI +G Sbjct: 196 ALLNDKAIALAHDNTLLLAWIKQ--HPEFKLGITSLGDKDVIAPAIKKGQP 244 >gi|330950012|gb|EGH50272.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae Cit 7] Length = 304 Score = 193 bits (490), Expect = 5e-47, Method: Composition-based stats. Identities = 45/243 (18%), Positives = 86/243 (35%), Gaps = 8/243 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPS----KIQ 79 L IK+ G + G + F+ + A+G G+ D + AI D K++ Sbjct: 28 GTLKKIKESGTITLGHRDASIPFSYIADASGVPMGYSHDIQLKIVEAIKKDLDMPDLKVK 87 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 Y + ++ R +Q+ +D+ +T + R+ + + + G + K Sbjct: 88 YNLVTSQTRIPLVQNGTVDVECGSTTNNVERQQQVDFSIGI--FEVGTRLLSKKDSSYKD 145 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L G ++ AGTT+E L M + I + E + R A+ D + Sbjct: 146 FDDLKGKNVVTTAGTTSERILKAMNADKQMGMNVISAKDHGESFQMLESGRAVAFMMDDA 205 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQ 258 L +P + + S + +GD + V A + ++ I Sbjct: 206 LLAGEMAKAKKPDDWAVTGTAQSYEIYGCMVRKGDAPFKKAVDDAIVATYKSGDINAIYS 265 Query: 259 KNI 261 K Sbjct: 266 KWF 268 >gi|120612858|ref|YP_972536.1| extracellular solute-binding protein [Acidovorax citrulli AAC00-1] gi|120591322|gb|ABM34762.1| amino acid ABC transporter substrate-binding protein, PAAT family [Acidovorax citrulli AAC00-1] Length = 303 Score = 193 bits (490), Expect = 5e-47, Method: Composition-based stats. Identities = 61/249 (24%), Positives = 106/249 (42%), Gaps = 10/249 (4%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKGFDVDFCRALSSAIFD---- 73 A + I++ + G+ F+ V A G G+ VD C+A+ I + Sbjct: 24 AQAPADTMARIQQTRTITLGVRESAWPFSFVDAQNGGKAAGYSVDLCQAVVEEIKNTLKL 83 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 +++Y ++A ER L++ +ID+ +T T R +AF P + G ++ K Sbjct: 84 KDLEVKYRTVSAAERIPKLEAGEIDLECGSTTNTKAR--QERVAFGPTMFVAGIRVLVPK 141 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 +V L+G ++ V G+T+E L A+ +K VF+ +E A RA A Sbjct: 142 GTKADTVQNLAGMTVAVSKGSTSEKLLTQ-LTANEVKAKVKVFDNNDEAFKALRAGTVKA 200 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 + D S L L N + ++S P A + + DT +V T + T+ E Sbjct: 201 FAQDDSLLLGLVARNKAQDALALGHFVLSVEPYAIMVRKNDTALMTVVDRTLGKLYTSRE 260 Query: 254 LG-ITQKNI 261 + I +K Sbjct: 261 IDPIYKKWF 269 >gi|289627186|ref|ZP_06460140.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289648680|ref|ZP_06480023.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. aesculi str. 2250] gi|330868023|gb|EGH02732.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 283 Score = 192 bits (489), Expect = 5e-47, Method: Composition-based stats. Identities = 51/258 (19%), Positives = 98/258 (37%), Gaps = 4/258 (1%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 + L ++ + S L + KRG L G + + A+G +GFD+D R ++ Sbjct: 15 LAASFTLANSAQAAEGSKLDAVLKRGNLVVGTGSTNAPWHFQGADGKLQGFDIDIGRIIA 74 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 +F+DPSK++++ ++ R L + ++DI + T R + Y +G Sbjct: 75 KGLFNDPSKVEFVVQSSDARIPNLLTDKVDISCQFITVTASRAQQVAFTL--PYYREGVA 132 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 ++ + L A V + + K ++ V+ + A + Sbjct: 133 LLLPANSKYKEIDDLKAAGDGVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLMYQAINS 192 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 R D D S++ L + P + S A A+ +GD +W N V+ + Sbjct: 193 GRADTAATDQSSVKYLMVQ--NPGRYRSPAFAWSPQTYACAVKRGDQDWLNFVNTALHEA 250 Query: 249 VTAEELGITQKNINQVSK 266 +T E + Q Sbjct: 251 MTGVEFPAYAASFKQWFG 268 >gi|258406149|ref|YP_003198891.1| extracellular solute-binding protein family 3 [Desulfohalobium retbaense DSM 5692] gi|257798376|gb|ACV69313.1| extracellular solute-binding protein family 3 [Desulfohalobium retbaense DSM 5692] Length = 275 Score = 192 bits (489), Expect = 5e-47, Method: Composition-based stats. Identities = 57/272 (20%), Positives = 109/272 (40%), Gaps = 14/272 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + + LF + K ++ G+ T + A + +W GFD Sbjct: 1 MRFGKILFLAVIFALFSAQAVLAGPTYDQVMKDKVIRAGLMTDSIPGAFYNKDNEWVGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + ++ + +++ +P+ K R +Q +ID+ N RE + F Sbjct: 61 VDIAKEIAKRL---DCELKRVPVTNKTRIAFVQQGRIDMSVANMTH--KRERDKSIDFSI 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA---HNMKYHPIVFE 177 +FDGQ ++ K ++ ++ G I GTT+E+ L + + N + I F+ Sbjct: 116 TYFFDGQKLLVKKGS-FANWDEIVGQKIATMQGTTSEVNLKNKLEELGDTNADDNVISFQ 174 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + E A R ++ D + L RP E+ ++ D IS P + + D++W Sbjct: 175 KESECFQALEMGRVAGWSTDSTILLGYAA--KRPGEYELIGDFISDEPYGIGLPEDDSKW 232 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 + +++T M G N+ T Sbjct: 233 RDTINFTIQDMWL---DGTYMDIYNKWYGPDT 261 >gi|227903457|ref|ZP_04021262.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus acidophilus ATCC 4796] gi|227868777|gb|EEJ76198.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus acidophilus ATCC 4796] Length = 284 Score = 192 bits (489), Expect = 5e-47, Method: Composition-based stats. Identities = 52/279 (18%), Positives = 110/279 (39%), Gaps = 17/279 (6%) Query: 1 MYKDFFVSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55 M K +F+S + +L T + N SI +K+ + G+ F + +G Sbjct: 13 MRKKYFLSTFLIALLAITLSACGQNKNQSIYQTVKETKSITWGVKADTPLFGSMSIKDGK 72 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +GF++D AL+ I +K ++ A + L+++ +D + T R+ + Sbjct: 73 VRGFEIDLAEALTHKILGKQAKANFVTTTANTKIQLLKNRNVDAVIAAMTITPERKKQVE 132 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + GQ ++ K I++V L+ + + GTT+ + + + Sbjct: 133 F--SKPYFPAGQSIMVAKNSKINNVKDLNNKRVLIVKGTTSADAVRKFAPKA----EILQ 186 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F+ + AA +A + DA+ D L + S + I + P A+ +G Sbjct: 187 FDDYGQAFAALKADQGDAFVTDNGILAGI---LRDNSGYKIAGGTFTNQPYGIAVNKGQN 243 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 E ++ A+ E+ G + + + + +V+ Sbjct: 244 EMMEHIN---LALTQLEKDGTYNRLVEKWFGNIPGFNVK 279 >gi|27378207|ref|NP_769736.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] gi|27351354|dbj|BAC48361.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] Length = 302 Score = 192 bits (489), Expect = 5e-47, Method: Composition-based stats. Identities = 49/270 (18%), Positives = 96/270 (35%), Gaps = 9/270 (3%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 + + + L S + ++ L IK G + G + F+ + + GF +D C Sbjct: 13 LIGLAAVGTLAGPSIAADSPTLAKIKSSGAITIGHREASIPFSYLGPDQKPIGFSLDLCA 72 Query: 66 ALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + I + S + Y P+N+ R +QS +DI T R+ ++F Sbjct: 73 GIVERIKAELSLPNLAVNYTPVNSSNRIPLIQSGTVDIECGGTAN--DRKRQEQVSFSVA 130 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 T+ +++ G+ + L G +I V G+ + ++ + + E Sbjct: 131 TFVSQPRWLVKADSGLKTAGDLKGKTIVVTQGSNAVGFAQGVNAKEQLGFNIVQAKDHAE 190 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 R A+ D L LK +P + LP+ +K +GD + +V Sbjct: 191 SFLMLNTGRAAAFMEDDILLAGLKAAAPKPDALIFLPEGYAKIYYGLMFTKGDAGFKALV 250 Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + + G +K + P Sbjct: 251 DDVLSKQMAS---GQFEKTYAKWFTRGIPP 277 >gi|256377588|ref|YP_003101248.1| extracellular solute-binding protein family 3 [Actinosynnema mirum DSM 43827] gi|255921891|gb|ACU37402.1| extracellular solute-binding protein family 3 [Actinosynnema mirum DSM 43827] Length = 319 Score = 192 bits (489), Expect = 5e-47, Method: Composition-based stats. Identities = 48/258 (18%), Positives = 103/258 (39%), Gaps = 13/258 (5%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFD 73 L + S + I +RG L G++ G+ +GFDVD R ++ ++ Sbjct: 67 LPAPGAMPSGSTMRRIAERGQLVVGVDQNTYLMGFRDPFTGELQGFDVDLAREVARSLLG 126 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 DP+K+++ LN+ +R AL++ ++D++ R T R + + Y GQ ++ K Sbjct: 127 DPTKVRFRVLNSDQRLPALETGEVDVVVRTMTITCERWRRVNFSTS--YYEAGQRVLVPK 184 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 G++ ++ LSG +C G+++ + +AH P+ + + + DA Sbjct: 185 DSGVTGLTALSGRKVCATTGSSSLA----HVRAHPSGPVPVAVPNWTDCLVMLQQGQVDA 240 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 + D + L + ++ ++ + +G + V+ + Sbjct: 241 ISTDDTILAGFAAQDP---YTEVVGPRLTTESYGIGVAKGADDLTRFVNGVLERVRA--- 294 Query: 254 LGITQKNINQVSKDTTNP 271 G + + D P Sbjct: 295 DGTWARIHRKWLGDPPAP 312 >gi|325570409|ref|ZP_08146186.1| glutamate ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus casseliflavus ATCC 12755] gi|325156619|gb|EGC68796.1| glutamate ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus casseliflavus ATCC 12755] Length = 269 Score = 192 bits (489), Expect = 5e-47, Method: Composition-based stats. Identities = 50/272 (18%), Positives = 104/272 (38%), Gaps = 19/272 (6%) Query: 1 MYKDFFVSILCLIILFFTSF-----STNASILGDIKKRGFLKCGINTGLVGFAEVK-ANG 54 M K F ++ L S + + IL + K+ + G+ F + A Sbjct: 1 MRKKIFSFLVLAFALVTFSGCKGQSAADIDILENSKETNQIVWGVKNDTRLFGLMDIATR 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + +GFD+D RA++ I ++ + +K R L++ ID + T R+ + Sbjct: 61 EVRGFDIDIARAITEKILGRDGNAIFVEVTSKTRIPLLKNGNIDAIIATMTITEERKKQV 120 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHP 173 + + GQ ++ K I + L + ++ V G+T+ + + + Sbjct: 121 DF--SDVYFDAGQSLLVAKDSPIQGIEDLTADTTVLVVKGSTSAVNIREAAPEAQ----I 174 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + E E A ++ + DA D + L + N + ++ + ++ P AI +G Sbjct: 175 LELENYAEAFTALQSGQGDAMITDNAILLGMASENPN---YHLVGETFTEEPYGIAINKG 231 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 + + V+ M E G + N+ Sbjct: 232 QKPFLDAVNQALREM---REDGTYDEIYNKWF 260 >gi|229056415|ref|ZP_04195828.1| hypothetical protein bcere0026_5420 [Bacillus cereus AH603] gi|228720889|gb|EEL72438.1| hypothetical protein bcere0026_5420 [Bacillus cereus AH603] Length = 259 Score = 192 bits (489), Expect = 5e-47, Method: Composition-based stats. Identities = 52/251 (20%), Positives = 98/251 (39%), Gaps = 12/251 (4%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSK 77 + + + IKKRG L G+ F + G +GFD+D +AL+ I D K Sbjct: 17 TNTKQGGAVEQIKKRGKLVVGVKNDTNLFGLKNPSTGQVEGFDIDIAKALAKKILGDEKK 76 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++ + +K R L++ ID + T R+ + + + GQ ++ K I Sbjct: 77 LELKEVTSKTRIPMLKNGDIDAIIATMTITEERKKEVDF--SDVYFKAGQSLLVKKGSNI 134 Query: 138 SSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 S+ + G + G+T+ + + FE E A +A + D T Sbjct: 135 KSIDDVKQGVKVLAVKGSTSTNNIRQKSPEA----TVLEFENYSEAFTALKAGKGDVLTT 190 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL-G 255 D + LY + + + ++ I + P A+ +G + ++ M E Sbjct: 191 DNAILYGMAKQDSN---YEVVGKIFTDEPYGIAVQKGADDLTKEINSLLKDMKANGEYDK 247 Query: 256 ITQKNINQVSK 266 + +K I Q + Sbjct: 248 LYEKWIGQKQE 258 >gi|268592306|ref|ZP_06126527.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Providencia rettgeri DSM 1131] gi|291312087|gb|EFE52540.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Providencia rettgeri DSM 1131] Length = 279 Score = 192 bits (489), Expect = 6e-47, Method: Composition-based stats. Identities = 61/278 (21%), Positives = 104/278 (37%), Gaps = 17/278 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59 M ++L L L T+ +A L DIK+ G ++ + F + G+ Sbjct: 1 MKARILTTVL-LTGLALTANVASADKLDDIKQAGVIRISVFDSNPPFGFIDPQTKKLAGY 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD + ++ + K++ P N R L S ++D++ N T R + + Sbjct: 60 DVDIAQEIADGLG---VKLELRPTNPANRIPLLTSGKVDLIGANFTITDERAKQVDFSIP 116 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ FI K + + + I GT E+TL + F I ++ Sbjct: 117 D--FATGQKFIARKG-VLKTPDDIKPLRIGADKGTVQEVTLRERFPET----KVISYDDT 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEW 237 + AA R A T D + L L ++ I P ++K A A +G+T Sbjct: 170 PQAFAALRNGNVQAITQDDAKLVGLLGNLPEKVKADFEISPFSLTKEYQALAASKGETRL 229 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 V+ T + E+ G + N+ T R Sbjct: 230 VENVNETL---LKLEKEGKAEVIYNRWFGPDTKAAQPR 264 >gi|330969980|gb|EGH70046.1| extracellular solute-binding protein [Pseudomonas syringae pv. aceris str. M302273PT] Length = 262 Score = 192 bits (489), Expect = 6e-47, Method: Composition-based stats. Identities = 55/262 (20%), Positives = 108/262 (41%), Gaps = 15/262 (5%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 + + S ++S L IK R L G+ + F V G + GFD D + + + D Sbjct: 1 MAKAAPSPSSSYLETIKARDKLIVGVFSDKPPFGFVNEQGQYVGFDTDLGKRFAKDLLGD 60 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 K++++ + R LQS ++D++ N T R ++ ++ + Sbjct: 61 EKKVEFVVVEPASRIPFLQSDKVDLILANMTVTPERREAVDFTH--PNLRVAVQALVPQA 118 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 + ++ L+ + V GTT ++ L ++ + + FE+ E A R DAY Sbjct: 119 SPVKTLDDLASKTTIVTTGTTADIWLT----KNHPDWKVLKFEKNSESLQALANGRGDAY 174 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D L++ P V+ + ++P+APA+ +G+ E + W + + E Sbjct: 175 AQDNLVLFSWAK--KNPGYRVLEQKLGDEAPIAPAVKKGNIELRD---WVNTELARLGEE 229 Query: 255 GITQKNINQV----SKDTTNPD 272 K +Q + T+P+ Sbjct: 230 KYLLKLYDQYVRPELAEGTDPN 251 >gi|170748665|ref|YP_001754925.1| extracellular solute-binding protein [Methylobacterium radiotolerans JCM 2831] gi|170655187|gb|ACB24242.1| extracellular solute-binding protein family 3 [Methylobacterium radiotolerans JCM 2831] Length = 301 Score = 192 bits (489), Expect = 6e-47, Method: Composition-based stats. Identities = 55/247 (22%), Positives = 99/247 (40%), Gaps = 11/247 (4%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAE-----VKANGDWKGFDVDFCRALSSAI 71 ++ L + +RG + G V F+ + G+ +D C ++ + Sbjct: 18 ASAVEVLTGTLRSVAERGEIVLGYRESSVPFSFVEGKQPDGSPRPIGYAIDLCGEIADDV 77 Query: 72 ---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 P KI+Y P+ A+ R A+ S +ID+ +T R + P+ Y Sbjct: 78 QAAIGRPVKIRYAPVTAETRIEAVTSGKIDLECGSTTANAERRKQVAF--SPVDYISATQ 135 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 ++ + GI+S L G ++ V AGTT E + D + + A +A Sbjct: 136 LLVRRGSGIASYRDLGGRTVVVTAGTTNEKAVRDQLARLKINAQVVTAPDHAASYAMVKA 195 Query: 189 HRCDAYTGDISALYALKLTNDRPS-EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 + DA+ D LY L T+ + ++ +LPD +S P + D+E +V T Sbjct: 196 GKADAFATDDVLLYGLIATDAKDGADYTVLPDKLSYEPYGIMFRKDDSELAGLVQQTFTR 255 Query: 248 MVTAEEL 254 + + L Sbjct: 256 LAESRAL 262 >gi|317053431|ref|YP_004119198.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b] gi|316953170|gb|ADU72642.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b] Length = 302 Score = 192 bits (489), Expect = 6e-47, Method: Composition-based stats. Identities = 44/274 (16%), Positives = 95/274 (34%), Gaps = 13/274 (4%) Query: 6 FVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 ++ + + L + L I G + G G V F+ G+ + Sbjct: 4 YLPLFTVFTLGMLALPVAGEELNGTLKKIADSGEIAVGHRDGAVPFSYYDDKQQPIGYAM 63 Query: 62 DFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 D C A+ A+ +K + + + R L + ID+ T R+ + Sbjct: 64 DICGAVVDAVKAKLNKPDLKVDTMAVTGATRIPLLANGTIDMECGTTTNNAERQKQVTF- 122 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + + K +S +++L G ++ AGTT+ + D A ++ ++ + Sbjct: 123 -STTYFVAAVRIMSKKSAPVSDMAELKGKAVVTLAGTTSVKIINDANNAQHLGMRILLAK 181 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + E R A+ D +L + T P ++ I +S P + + D ++ Sbjct: 182 DLAEGMLTLETGRAAAFIFDDVSLAGARATAKSPDDYQISEQPLSVEPYGIMLRRDDPQF 241 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 +V+ + + G ++ P Sbjct: 242 KALVNAAIEGLYKS---GAINAIYDKWFTQPIAP 272 >gi|163853360|ref|YP_001641403.1| extracellular solute-binding protein [Methylobacterium extorquens PA1] gi|163664965|gb|ABY32332.1| extracellular solute-binding protein family 3 [Methylobacterium extorquens PA1] Length = 303 Score = 192 bits (489), Expect = 6e-47, Method: Composition-based stats. Identities = 44/247 (17%), Positives = 88/247 (35%), Gaps = 8/247 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD----DPSKIQ 79 + L +K G + G V F+ + N G+ + C ++ A+ D +++ Sbjct: 27 SGTLKKVKDTGAITIGYRDASVPFSYLDGNQKPVGYAFEICLKVADAVKAHLKLDTLEVR 86 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 P+ + R + + ID+ +T R+ + F+ + KG+ Sbjct: 87 LNPVTSATRIPLIANGTIDLECGSTTNNADRQRQAAF--TNTHFLTATRFVAKRDKGLDK 144 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L G ++ +GTT + + A + + + E R DA+ D Sbjct: 145 TDDLKGRTVVSTSGTTNIRQINEINTARGLGMRILPAKDHAEAFLMVETGRADAFVTDDV 204 Query: 200 ALYALKLTNDRPSEHVILPDIIS-KSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE-LGIT 257 L AL + P + I + S P + + D + +V A+ + E + Sbjct: 205 LLAALVAGSKTPDAYAISSEAQSRPEPYGIMLRKDDPAFKAVVDAATAALYKSPEGTALY 264 Query: 258 QKNINQV 264 +K Q Sbjct: 265 EKWFTQA 271 >gi|71733635|ref|YP_274850.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|298487226|ref|ZP_07005275.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|71554188|gb|AAZ33399.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|298158250|gb|EFH99321.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330985341|gb|EGH83444.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. lachrymans str. M301315] Length = 283 Score = 192 bits (489), Expect = 6e-47, Method: Composition-based stats. Identities = 51/258 (19%), Positives = 97/258 (37%), Gaps = 4/258 (1%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 + L + + S L + KRG L G + + A+G +GFD+D R ++ Sbjct: 15 LAASFTLANAAQAAEGSKLDAVLKRGNLVVGTGSTNAPWHFQGADGKLQGFDIDIGRIIA 74 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 +F+DPSK++++ ++ R L + ++DI + T R + Y +G Sbjct: 75 KGLFNDPSKVEFVVQSSDARIPNLLTDKVDISCQFITVTASRAQQVAFTL--PYYREGVA 132 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 ++ + L A V + + K ++ V+ + A + Sbjct: 133 LLLPANSKYKEIDDLKAAGDGVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLMYQAINS 192 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 R D D S++ L + P + S A A+ +GD +W N V+ + Sbjct: 193 GRADTAATDQSSVKYLMVQ--NPGRYRSPAFAWSPQTYACAVKRGDQDWLNFVNTALHEA 250 Query: 249 VTAEELGITQKNINQVSK 266 +T E + Q Sbjct: 251 MTGVEFPAYAASFKQWFG 268 >gi|104780401|ref|YP_606899.1| glutamate/aspartate ABC transporter periplasmic binding protein [Pseudomonas entomophila L48] gi|95109388|emb|CAK14088.1| glutamate/aspartate ABC transporter, periplasmic binding protein [Pseudomonas entomophila L48] Length = 305 Score = 192 bits (489), Expect = 6e-47, Method: Composition-based stats. Identities = 47/253 (18%), Positives = 92/253 (36%), Gaps = 11/253 (4%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPSKIQYL 81 L IK G + G + F+ + + G+ D A+ A+ K++Y Sbjct: 28 GTLKKIKDSGTITLGHRDSSIPFSYLAGKPEPVGYSHDIQLAVVEALKKQLGTDIKVKYN 87 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG---IS 138 + ++ R +Q+ +D+ +T + R+ +G + + G + K G Sbjct: 88 LVTSQTRIPLVQNGTVDLECGSTTNNVERQQQVGFSVGI--FEVGTRLLTKVKDGQPSFK 145 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 L+G ++ AGTT+E L MK + I + E + R A+ D Sbjct: 146 DFPDLAGKNVVTTAGTTSERILKAMNADKQMKMNVISAKDHGEAFNMLESGRAVAFMMDD 205 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 + L +P++ VI S + + D + V A + E+ Sbjct: 206 ALLAGEMAKAKKPTDWVITGTPQSYEIYGCMVRKDDPAFKKAVDEAIVAYFKSGEVN--- 262 Query: 259 KNINQVSKDTTNP 271 K+ ++ + P Sbjct: 263 KSYDKWFQQPIPP 275 >gi|328946749|gb|EGG40887.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK1087] Length = 270 Score = 192 bits (488), Expect = 6e-47, Method: Composition-based stats. Identities = 53/253 (20%), Positives = 101/253 (39%), Gaps = 11/253 (4%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSK 77 + S+ + + I+KRG L G+ + F + + + + G ++D + ++ + K Sbjct: 27 ADSSTSQQVKAIQKRGVLNVGVKQDVPNFGYLNPDSNTYSGLEIDIAKKIAKELG---VK 83 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 I Y+P+ A+ R L + Q+D++ T R F Y D GF+++K I Sbjct: 84 INYVPVTAQTRGPLLDNGQVDMVIATFTITDER--KEIYNFTTPYYTDASGFLVNKSSKI 141 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 V L+ +I V G+ T+ L + + + + + E+ + RAHR DA + D Sbjct: 142 KDVKDLNNKTIGVVQGSITQTLLEEIAQEKKLNFKYVELGSYPELAVSLRAHRIDAISVD 201 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 S L + IL K+ + +T+ + V L Sbjct: 202 KSILTGYVSSKSN-----ILDYSFKKADYGVVTKKSNTQLNDYVDGLISKWKENGSLQKL 256 Query: 258 QKNINQVSKDTTN 270 + D+T+ Sbjct: 257 YDKYDLKPSDSTD 269 >gi|325526439|gb|EGD04023.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia sp. TJI49] Length = 301 Score = 192 bits (488), Expect = 6e-47, Method: Composition-based stats. Identities = 45/252 (17%), Positives = 90/252 (35%), Gaps = 9/252 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK----IQ 79 + L I++ + G V F+ V A+G GF D C + +A+ K ++ Sbjct: 29 SGTLEKIRQNNLISIGHRETSVPFSYVDASGKVIGFSQDLCDRVIAAVKARTGKPDLQVR 88 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 ++P+ ++ R +Q+ +D+ T R + + + + GI Sbjct: 89 FIPVTSQNRIPLVQNGTVDLECGVTTNLAARHAQVAF--STTFFVATTRLLTRTQSGIRD 146 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L+G ++ GTT+E L + M I + E + R AY D Sbjct: 147 FPDLAGKTVVTNQGTTSERLLRKMNEDKKMNMQIISAKDYGEGRLTLESGRAAAYMMDDV 206 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L ++ +P++ I+ S + + D ++ +V V + G Sbjct: 207 LLAGVRQLAAKPADWQIVGTPQSSEAYGFMLRKDDPQFKALVDGVL---VQLMKRGEIDA 263 Query: 260 NINQVSKDTTNP 271 ++ P Sbjct: 264 LYDKWFMKPVPP 275 >gi|225350813|ref|ZP_03741836.1| hypothetical protein BIFPSEUDO_02383 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225158269|gb|EEG71511.1| hypothetical protein BIFPSEUDO_02383 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 302 Score = 192 bits (488), Expect = 6e-47, Method: Composition-based stats. Identities = 58/251 (23%), Positives = 105/251 (41%), Gaps = 18/251 (7%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L +IKK G LK + + F V +G++ G+DV F L + D ++Y ++A Sbjct: 56 TLDEIKKSGKLKVAVFSDKAPFGYVDKDGNYAGYDVYFAERLGKDLGVD---VEYTSVDA 112 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 R L S ++DI N T R+ + A G + + I+ V QL G Sbjct: 113 AARVDVLTSNKVDITLANFTVTDERKEKVDFA--KPYMKVALGVVSPENAEITDVDQLKG 170 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 ++ V GTT E +F+ + +++ + A R DA++ D + + A Sbjct: 171 KTLIVTKGTTAET----FFEKNYPDIKLQKYDQYADAYNALLDGRGDAFSTDNTEVLAWA 226 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ-- 263 +N V + ++ K +A A+ +G+ E + W + + + K+ + Sbjct: 227 KSNK--GFKVGITELGDKDTIAAAVQKGNKELLD---WINDEIDKLGDENFFHKDYEETL 281 Query: 264 --VSKDTTNPD 272 V D +PD Sbjct: 282 KPVYGDEVDPD 292 >gi|307708866|ref|ZP_07645326.1| ABC transporter substrate-binding protein [Streptococcus mitis SK564] gi|307620202|gb|EFN99318.1| ABC transporter substrate-binding protein [Streptococcus mitis SK564] Length = 288 Score = 192 bits (488), Expect = 6e-47, Method: Composition-based stats. Identities = 57/289 (19%), Positives = 112/289 (38%), Gaps = 28/289 (9%) Query: 1 MY--KDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTGL 44 M K + L F + + A + +IKK G L+ + Sbjct: 1 MKLLKPLLTVLALAFALIFVTACSSGGNGGASSGKTTAKARTIDEIKKSGELRIAVFGDK 60 Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 F V +G ++G+D++ L+ + + ++Y+ ++A R L S ++DI N Sbjct: 61 KPFGYVDNDGSYQGYDIELGNQLAQDLGVN---VKYVSVDAANRAEYLISNKVDITLANF 117 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164 T R+ + A G + K I+ V QL G ++ V GTT E YF Sbjct: 118 TVTDERKKQVDFAL--PYMKVSLGVVSPKTGLITDVKQLEGKTLIVTKGTTAET----YF 171 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 + ++ + +++ + A R DA++ D + + A L N V + + + Sbjct: 172 EKNHPEVKLQKYDQYSDSYQALLDGRGDAFSTDNTEVLAWALENK--GFEVGITSLGNPD 229 Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSKDTTNPD 272 +A A+ +G+ E + ++ + +K ++ D D Sbjct: 230 TIAAAVQKGNQELLDFINKDIEKLGKGNFFHKAYEKTLHPTYGDAAKAD 278 >gi|15643359|ref|NP_228403.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Thermotoga maritima MSB8] gi|4981112|gb|AAD35678.1|AE001734_5 amino acid ABC transporter, periplasmic amino acid-binding protein [Thermotoga maritima MSB8] Length = 246 Score = 192 bits (488), Expect = 6e-47, Method: Composition-based stats. Identities = 54/265 (20%), Positives = 109/265 (41%), Gaps = 21/265 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K VSIL + I+ F+ + +IK RG+L G++ F V NG+ GFD Sbjct: 1 MKKLLAVSILLVSIVIFSGA------IDEIKSRGYLLVGLSADFPPFEFVDENGNIVGFD 54 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + ++ + + ++ + + +L +K+ID++ T R+ + Sbjct: 55 VDLAKEIARRLGVE---LKIVDMTFDGLIPSLLTKKIDVIISGMTITEERKKVVAF--SD 109 Query: 121 ITYFDGQGFIMHKKKGI--SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + GQ ++ K + L G ++ VQ GTT ++ ++ Y + F++ Sbjct: 110 PYFDAGQVIVVRKDSDFRPKTYEDLVGKTVAVQIGTTGDIEVSKY-----DGIKVVRFDK 164 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + + R DA D + A N + VI ++S A+ + DT+ Sbjct: 165 FTDAFLELKRGRADAVVLDSATARAFVAKNP---DLVISSGVLSSEQYGIAVRKEDTDLL 221 Query: 239 NIVSWTHYAMVTAEELGITQKNINQ 263 ++ + + + +K ++ Sbjct: 222 EFINSVLRELKKSPYDVLIEKWFSE 246 >gi|225856389|ref|YP_002737900.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain protein [Streptococcus pneumoniae P1031] gi|225726288|gb|ACO22140.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain protein [Streptococcus pneumoniae P1031] Length = 288 Score = 192 bits (488), Expect = 6e-47, Method: Composition-based stats. Identities = 57/287 (19%), Positives = 112/287 (39%), Gaps = 26/287 (9%) Query: 1 MYKDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTGLVG 46 ++K + L F + + A + +IKK G L+ + Sbjct: 3 LFKPLLTVLALAFALIFITACSSGGNAGSSSGKTTAKARTIDEIKKSGELRIAVFGDKKP 62 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F V +G ++G+D++ L+ + K++Y+ ++A R L S ++DI N Sbjct: 63 FGYVDNDGSYQGYDIELGNQLAQDLG---VKVKYISVDAANRAEYLISNKVDITLANFTV 119 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T R+ + A G + K I+ V QL G ++ V GTT E YF+ Sbjct: 120 TDERKKQVDFAL--PYMKVSLGVVSPKTGLITDVKQLEGKTLIVTKGTTAET----YFEK 173 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 ++ + +++ + A R DA++ D + + A L N V + + + Sbjct: 174 NHPEIKLQKYDQYSDSYQALLDGRGDAFSTDNTEVLAWALENK--GFEVGITSLGDPDTI 231 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSKDTTNPD 272 A A+ +G+ E + ++ + +K ++ D D Sbjct: 232 AAAVQKGNQELLDFINKDIEKLGKENFFHKAYEKTLHLTYGDAAKAD 278 >gi|94309344|ref|YP_582554.1| extracellular solute-binding protein [Cupriavidus metallidurans CH34] gi|93353196|gb|ABF07285.1| glutamate and aspartate transporter subunit ; periplasmic-binding component of ABC superfamily [Cupriavidus metallidurans CH34] gi|222871736|gb|EEF08867.1| predicted protein [Populus trichocarpa] Length = 299 Score = 192 bits (488), Expect = 6e-47, Method: Composition-based stats. Identities = 46/267 (17%), Positives = 95/267 (35%), Gaps = 9/267 (3%) Query: 4 DFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 ++ +L + + L IK G + G+ + F G+ Sbjct: 5 KLAGLMIAAGVLCGNAQAAEQLTGTLQKIKDTGVITLGVRDSSIPFNYNLGGVRQVGYSY 64 Query: 62 DFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 D + AI D +++ +P+ ++ R LQ+ IDI +T L R+ + Sbjct: 65 DINMKIVEAIKDQLKLPNLQVKEIPITSQNRITLLQNGTIDIECGSTTNNLERQKQVSF- 123 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + G ++ K GI + L G ++ AGTT+E L + + I + Sbjct: 124 -TDTIFIIGTRIMVKKDGGIKDWADLKGKNVVTTAGTTSERLLRKMNDDQKLGMNIISTK 182 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + + R A+ D + LY + P++ +++ S+ I + D + Sbjct: 183 DHGQSFLTLESGRAVAFMMDDALLYGERAKAKNPNDWIVVGKPQSREAYGCMIRKDDAPF 242 Query: 238 YNIVSWTHYAMVTAEELG-ITQKNINQ 263 + ++ + + K Q Sbjct: 243 KKVSDQVIAGLMKDGSINTMYTKWFMQ 269 >gi|237800640|ref|ZP_04589101.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331023499|gb|EGI03556.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 283 Score = 192 bits (488), Expect = 7e-47, Method: Composition-based stats. Identities = 52/258 (20%), Positives = 97/258 (37%), Gaps = 4/258 (1%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 + L T + S L + KRG L G + + A+G +GFD+D R ++ Sbjct: 15 LAASFSLTNTGQAAQGSKLEAVLKRGNLVVGTGSTNAPWHFQGADGKLQGFDIDIGRIIA 74 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 +F+DPSK++++ ++ R L + ++DI + T R + Y +G Sbjct: 75 KGLFNDPSKVEFVVQSSDARIPNLLTDKVDISCQFITVTASRAQQVAFTL--PYYREGVA 132 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 ++ + L A V + + K ++ V+ + A + Sbjct: 133 LLLPANSKYKEIDDLKAAGDGVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLMYQAINS 192 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 R D D S++ L + P + S A A+ +GD +W N V+ + Sbjct: 193 GRADTAATDQSSVKYLMVQ--NPGRYRSPSFAWSPQTYACAVKRGDQDWLNFVNTALHEA 250 Query: 249 VTAEELGITQKNINQVSK 266 +T E + Q Sbjct: 251 MTGVEFPAYAASFKQWFG 268 >gi|237798757|ref|ZP_04587218.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331021610|gb|EGI01667.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 308 Score = 192 bits (488), Expect = 7e-47, Method: Composition-based stats. Identities = 44/243 (18%), Positives = 86/243 (35%), Gaps = 8/243 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPS----KIQ 79 L IK+ G + G + F+ + A+G G+ D + AI D K++ Sbjct: 32 GTLKKIKESGTITLGHRDASIPFSYIADASGVPMGYSHDIQLKIVEAIKKDLDMPALKVK 91 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 Y + ++ R +Q+ +D+ +T + R+ + + + G + K Sbjct: 92 YNLVTSQTRIPLVQNGTVDVECGSTTNNVERQKQVDFSTGI--FEVGTRLLSKKDSSYKD 149 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L G ++ AGTT+E + M + I + E + R A+ D + Sbjct: 150 FDDLKGKNVVTTAGTTSERIIKAMNADKQMGMNVISAKDHGESFQMLESGRAVAFMMDDA 209 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQ 258 L +P + + S + +GD + V A + ++ I Sbjct: 210 LLAGEMAKAKKPDDWAVTGTAQSYEIYGCMVRKGDAPFKKAVDDAIVATFKSGDINAIYS 269 Query: 259 KNI 261 K Sbjct: 270 KWF 272 >gi|330960987|gb|EGH61247.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 283 Score = 192 bits (488), Expect = 7e-47, Method: Composition-based stats. Identities = 51/258 (19%), Positives = 98/258 (37%), Gaps = 4/258 (1%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 + L + + + S L + KRG L G + + A+G +GFD+D R ++ Sbjct: 15 LAASFTLANAAQAADGSKLDAVLKRGNLIVGTGSTNAPWHFQGADGKLQGFDIDIGRIIA 74 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 +F+DPSK++++ ++ R L + ++DI + T R + Y +G Sbjct: 75 KGLFNDPSKVEFVVQSSDARIPNLLTDKVDISCQFITVTASRAQQVAFTL--PYYREGVA 132 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 ++ + L A V + + K ++ V+ + A + Sbjct: 133 LLLPANSKYKEIDDLKAAGDGVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLMYQAINS 192 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 R D D S++ L + P + S A A+ +GD +W N V+ + Sbjct: 193 GRADTAATDQSSVKYLMVQ--NPGRYRSPAFAWSPQTYACAVKRGDQDWLNFVNTALHEA 250 Query: 249 VTAEELGITQKNINQVSK 266 +T E + Q Sbjct: 251 MTGVEFPAYAASFKQWFG 268 >gi|268319381|ref|YP_003293037.1| ABC transporter solute-binding component [Lactobacillus johnsonii FI9785] gi|262397756|emb|CAX66770.1| ABC transporter solute-binding component [Lactobacillus johnsonii FI9785] Length = 284 Score = 192 bits (488), Expect = 7e-47, Method: Composition-based stats. Identities = 74/290 (25%), Positives = 119/290 (41%), Gaps = 30/290 (10%) Query: 1 MYKDFF-------VSILCLIILFFTSFSTNASI---------LGDIKKRGFLKCGINTGL 44 M K F V IL + + T+ S N+S + IKKRG +K + L Sbjct: 1 MKKHKFIKKLIAAVGILAVGAVILTACSNNSSSNSSSNNPSSVAAIKKRGTIKVAVFGDL 60 Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 + V +G G+DV R L+ + K++++ +NA R L + + DI+ N Sbjct: 61 PPYGWVNKDGKRVGYDVRLARELAKEMG---VKVKFVQVNANNRVDTLNANKADIVLANF 117 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164 T R+ + A G + K K I++V+QL G + V GTT E +YF Sbjct: 118 TVTSERKQVVDFA--KPYMKVSVGVVSPKSKPITNVNQLKGKKVIVTKGTTAE----NYF 171 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 + + F+ + A + R A D S LYA P V + + S Sbjct: 172 TSKQPDVDLLKFDSKTQQFNAMKNGRAAALADDNSYLYAWVKN--NPKYTVGIKHLGPNS 229 Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 +APA+ +G+ + WT+ + + G + NQ K DV+ Sbjct: 230 YIAPAVKKGNKSLLD---WTNKRINKLNKDGFFVNDYNQELKPYFGDDVK 276 >gi|125718374|ref|YP_001035507.1| polar amino acid ABC transporter amino acid-binding protein [Streptococcus sanguinis SK36] gi|125498291|gb|ABN44957.1| Polar amino acid ABC transporter, amino acid-binding protein, putative [Streptococcus sanguinis SK36] Length = 270 Score = 192 bits (488), Expect = 7e-47, Method: Composition-based stats. Identities = 54/246 (21%), Positives = 103/246 (41%), Gaps = 14/246 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSK 77 + S+ + + I+KRG L G+ + F + + + + G ++D + ++ + K Sbjct: 27 ADSSTSQQVKSIQKRGVLNVGVKQDVPNFGYLNPDSNTYSGLEIDIAKKIAKELG---VK 83 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 I Y+P+ A+ R L + Q+D++ T R F Y D GF+++K I Sbjct: 84 INYVPVTAQTRGPLLDNGQVDMVIATFTITDER--KEIYNFTTPYYTDASGFLVNKSSKI 141 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + V L+ +I V G+ T+ L + + + + + E+ + RAHR DA + D Sbjct: 142 TDVKDLNNKTIGVVQGSITQTLLEEIAQEKKLNFKYVELGSYPELAVSLRAHRIDAISVD 201 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 S L + IL K+ + +T+ + V +E G Sbjct: 202 KSILTGYVSSKSN-----ILDYSFKKADYGVVTKKSNTQLNDYVDGLISKW---KEDGSL 253 Query: 258 QKNINQ 263 QK ++ Sbjct: 254 QKIYDK 259 >gi|4204972|gb|AAD10862.1| orf J; putative ATP-binding cassette transport system; similar to substrate binding protein and to components of ABC transport systems [Leuconostoc lactis] Length = 279 Score = 192 bits (488), Expect = 7e-47, Method: Composition-based stats. Identities = 65/280 (23%), Positives = 118/280 (42%), Gaps = 21/280 (7%) Query: 2 YKDFFVSILCLIILFFT-------SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54 K V L + I+ F+ + + + IKK G +K + L + V NG Sbjct: 6 KKFAIVITLVVGIIGFSFEHKVADAATNQGRTIKQIKKSGKIKIAVFGDLKPYGWVDKNG 65 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 +G+D++ + ++ + K++Y+ +NA R AL S ++D+ N T R+ + Sbjct: 66 KRQGYDIELAKKIAKDLG---VKVKYVQVNANARVDALNSGKVDLALANFTVTPERKEVI 122 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 A G K I+ V+QL G ++ V GTT E YF + Sbjct: 123 SFA--KPYMKVSIGVASKKTNLITKVNQLKGKNLIVNKGTTAET----YFTKEYTSAKLL 176 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 F+ + AA + R DA T D S L+A D P V + + +S ++P + +G+ Sbjct: 177 KFDSKTQQFAALKDGRADAITDDNSYLFAWVK--DHPDYKVGIKQLGEQSYISPGVQKGN 234 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 +++ WT+ + + +K+ + DV+ Sbjct: 235 ---KSVLKWTNKEIKKLNKSNFFKKDYKKTLAPYFGDDVK 271 >gi|58336899|ref|YP_193484.1| glutamine ABC transporter [Lactobacillus acidophilus NCFM] gi|58254216|gb|AAV42453.1| glutamine ABC transporter [Lactobacillus acidophilus NCFM] Length = 272 Score = 192 bits (488), Expect = 7e-47, Method: Composition-based stats. Identities = 52/279 (18%), Positives = 110/279 (39%), Gaps = 17/279 (6%) Query: 1 MYKDFFVSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55 M K +F+S + +L T + N SI +K+ + G+ F + +G Sbjct: 1 MRKKYFLSTFLIALLAITLSACGQNKNQSIYQTVKETKSITWGVKADTPLFGSMSIKDGK 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +GF++D AL+ I +K ++ A + L+++ +D + T R+ + Sbjct: 61 VRGFEIDLAEALTHKILGKQAKANFVTTTANTKIQLLKNRNVDAVIAAMTITPERKKQVE 120 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + GQ ++ K I++V L+ + + GTT+ + + + Sbjct: 121 F--SKPYFPAGQSIMVAKNSKINNVKDLNNKRVLIVKGTTSADAVRKFAPKA----EILQ 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F+ + AA +A + DA+ D L + S + I + P A+ +G Sbjct: 175 FDDYGQAFAALKADQGDAFVTDNGILAGI---LRDNSGYKIAGGTFTNQPYGIAVNKGQN 231 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 E ++ A+ E+ G + + + + +V+ Sbjct: 232 EMMEHIN---LALTQLEKDGTYNRLVEKWFGNIPGFNVK 267 >gi|188583627|ref|YP_001927072.1| extracellular solute-binding protein family 3 [Methylobacterium populi BJ001] gi|179347125|gb|ACB82537.1| extracellular solute-binding protein family 3 [Methylobacterium populi BJ001] Length = 303 Score = 192 bits (488), Expect = 7e-47, Method: Composition-based stats. Identities = 44/246 (17%), Positives = 90/246 (36%), Gaps = 8/246 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA----IFDDPSKIQ 79 + L +K G + G V F+ + N G+ + C ++ A + D +++ Sbjct: 27 SGTLKKVKDTGAITIGYRDASVPFSYLDGNQKPVGYAFEICLQVADAVKAHLKRDTLEVR 86 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 P+ + R + + ID+ +T R+ + F+ ++KG+ Sbjct: 87 LNPVTSATRIPLIANGTIDLECGSTTNNADRQRQAAF--TNTHFLTATRFVAKREKGLDK 144 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L G ++ +GTT + + A + + + E R DA+ D Sbjct: 145 TDDLKGRTVVSTSGTTNIRQINEINTARGLGMRILPAKDHAEAFLMVETGRADAFVMDDV 204 Query: 200 ALYALKLTNDRPSEHVILPDIIS-KSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE-LGIT 257 L AL ++ P + I + S P + + D + +V A+ + E + Sbjct: 205 LLAALVASSKTPDAYAISSEAQSRPEPYGIMLRKDDPAFKAVVDAATAALYRSPEGRALY 264 Query: 258 QKNINQ 263 +K Q Sbjct: 265 EKWFTQ 270 >gi|240140776|ref|YP_002965256.1| glutamate and aspartate transporter subunit ; periplasmic-binding component of ABC superfamily [Methylobacterium extorquens AM1] gi|240010753|gb|ACS41979.1| glutamate and aspartate transporter subunit ; periplasmic-binding component of ABC superfamily [Methylobacterium extorquens AM1] Length = 303 Score = 192 bits (488), Expect = 7e-47, Method: Composition-based stats. Identities = 44/247 (17%), Positives = 88/247 (35%), Gaps = 8/247 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD----DPSKIQ 79 + L +K G + G V F+ + N G+ + C ++ A+ D +++ Sbjct: 27 SGTLKKVKDTGAITIGYRDASVPFSYLDGNQKPVGYAFEICLKVADAVKAHLKLDTLEVR 86 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 P+ + R + + ID+ +T R+ + F+ + KG+ Sbjct: 87 LNPVTSATRIPLIANGTIDLECGSTTNNADRQRQAAF--TNTHFLTATRFVAKRDKGLDK 144 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L G ++ +GTT + + A + + + E R DA+ D Sbjct: 145 TDDLKGRTVVSTSGTTNIRQINEINTARGLGMRILPAKDHAEAFLMVETGRADAFVMDDV 204 Query: 200 ALYALKLTNDRPSEHVILPDIIS-KSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE-LGIT 257 L AL + P + I + S P + + D + +V A+ + E + Sbjct: 205 LLAALVAGSKTPDAYAISSEAQSRPEPYGIMLRKDDPAFKAVVDAATAALYKSPEGTALY 264 Query: 258 QKNINQV 264 +K Q Sbjct: 265 EKWFTQA 271 >gi|207724820|ref|YP_002255217.1| substrate-binding periplasmic protein (pbp) [Ralstonia solanacearum MolK2] gi|206590045|emb|CAQ37006.1| substrate-binding periplasmic protein (pbp) [Ralstonia solanacearum MolK2] Length = 280 Score = 192 bits (488), Expect = 7e-47, Method: Composition-based stats. Identities = 50/260 (19%), Positives = 96/260 (36%), Gaps = 9/260 (3%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI----F 72 + ++ L IK G ++ V F+ + A G G+ +D C L AI Sbjct: 1 MMNAVASSPTLDRIKATGAIRLAHRESSVPFSYLDAGGKPIGYSMDLCMRLVDAIRENLK 60 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 K+QYL + R A+ + + D+ +T+ RE +AF Y ++ Sbjct: 61 RPDLKVQYLQVTPATRMDAIMNGKADLECASTNN--ARERREKVAFTIPHYIANGRMLVK 118 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 GI + L G ++ G+ + +A + + + A + Sbjct: 119 TASGIQKLEDLRGKTVVSTRGSANGDLVRQLSEAGGLGITVVEASDHAQSFAMLADGKAQ 178 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 A+ D L +K T P+++ I+ P A + + D E+ ++ AM Sbjct: 179 AFAMDDVLLAGMKATAKNPADYAIVGKTQQVVPYAIMLSKNDPEFKKLID---AAMSRLM 235 Query: 253 ELGITQKNINQVSKDTTNPD 272 E G ++ + + P+ Sbjct: 236 EDGEAERFYKKWFQQPIPPN 255 >gi|186471953|ref|YP_001863271.1| extracellular solute-binding protein [Burkholderia phymatum STM815] gi|184198262|gb|ACC76225.1| extracellular solute-binding protein family 3 [Burkholderia phymatum STM815] Length = 262 Score = 192 bits (488), Expect = 7e-47, Method: Composition-based stats. Identities = 60/274 (21%), Positives = 96/274 (35%), Gaps = 14/274 (5%) Query: 12 LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSA 70 + ++ S + A L DIKK G L+ F V G DVD+ RA+++ Sbjct: 1 MGLMLAISSAVRADRLDDIKKAGVLRVATFDSNPPFGFVDPKSNQIVGLDVDYARAVANK 60 Query: 71 IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130 + K++ P N R L+S ++D++ N T R+ + + YF Sbjct: 61 LG---VKLEIQPTNPANRIAFLKSGKVDLVFANFTITDERKKEVDFS---TPYFASGTQF 114 Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190 + KK + + QL+ I GTT E + F + ++ AA R Sbjct: 115 IAKKGVLKTPQQLNSLRIGADKGTTNEQQVRAQFPGA----TIVAYDDTPFAFAALRTGN 170 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 T D L AL + I IS + +G+T N+V T Sbjct: 171 VQVITQDGPKLVALLANVPDKGSYEISAFTISNDYEGVGVPKGETRLLNLVDDTLRG--- 227 Query: 251 AEELGITQKNINQVSKDTTNPDVQRFLGIDKSSN 284 E G K + + + R I Sbjct: 228 LEANGTAGKIYDAWFGPASRAPLPRLFKIGDPQK 261 >gi|186473522|ref|YP_001860864.1| extracellular solute-binding protein [Burkholderia phymatum STM815] gi|184195854|gb|ACC73818.1| extracellular solute-binding protein family 3 [Burkholderia phymatum STM815] Length = 299 Score = 192 bits (488), Expect = 8e-47, Method: Composition-based stats. Identities = 45/251 (17%), Positives = 88/251 (35%), Gaps = 7/251 (2%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS- 76 ++ L I++ G + G+ V F+ G+ + + + + Sbjct: 21 ACAQEPSATLKKIRETGAISLGVRESSVPFSYYDEQQHVIGYSQAIALKIVDEVKKELNL 80 Query: 77 ---KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 K++ +P+ ++ R +Q+ IDI +T T R+ + + Y G I+ K Sbjct: 81 PDLKVREIPITSQNRIPLVQNGTIDIECGSTTHTKERDNQVAFSNSFFQY--GVRMIVKK 138 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 + G+ L+ ++ AGT+ E L +M I + E + R A Sbjct: 139 ESGVKDFGDLANKTVVTTAGTSEERLLRQMNAEKSMNMRLISAKDHAESFLNVKTGRAVA 198 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 + D LY K E++I + D + + + T+ E Sbjct: 199 FVMDDPLLYGAKAKEANADEYLITGTSPMSEVYGCMFRKDDPGFKRLTDGVIARLQTSGE 258 Query: 254 -LGITQKNINQ 263 + QK Q Sbjct: 259 AANLYQKWFTQ 269 >gi|307133280|ref|YP_003885296.1| cystine-binding protein [Dickeya dadantii 3937] gi|306530809|gb|ADN00740.1| Cystine-binding protein [Dickeya dadantii 3937] Length = 278 Score = 192 bits (488), Expect = 8e-47, Method: Composition-based stats. Identities = 61/269 (22%), Positives = 99/269 (36%), Gaps = 17/269 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59 M K V L L L + + A L DI+K G +K + F V G+ Sbjct: 1 MKKSLLVFSL-LAGLVSLAGNAQADKLDDIQKAGVVKVAVFDSNPPFGYVDPQSKKLVGY 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD A+ A+ K++ N R L SK++D+++ N T R + Sbjct: 60 DVDVAEAIGKALG---VKVELRATNPANRIPLLTSKKVDLIAANFTITDERAKQVNF--S 114 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ FI HK + + + I GT E+TL +++ I ++ Sbjct: 115 VPYFATGQKFIAHKG-VLKTPDDIKNLRIGADKGTVQEITLREHYPTA----KVISYDDT 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTND--RPSEHVILPDIISKSPLAPAIIQGDTEW 237 A R A T D + L L + ++ I P I+K I +G+ Sbjct: 170 PLAFTALRNGNVQAITQDDAKLVGLLGNLPAAQKADFEISPFSITKEYQGIGIPKGEDRL 229 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSK 266 V+ + E+ G K ++ Sbjct: 230 TQKVNDIL---LNLEKQGDVVKIYHRWFG 255 >gi|289672924|ref|ZP_06493814.1| extracellular solute-binding protein [Pseudomonas syringae pv. syringae FF5] gi|330982422|gb|EGH80525.1| extracellular solute-binding protein [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 290 Score = 192 bits (488), Expect = 8e-47, Method: Composition-based stats. Identities = 57/259 (22%), Positives = 107/259 (41%), Gaps = 15/259 (5%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 + S ++S L IK R L G+ + F V G + GFD D + + + D K Sbjct: 32 AAPSPSSSYLETIKARDKLIVGVFSDKPPFGFVNEQGQYVGFDTDLGKRFAKDLLGDEKK 91 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 I+++ + R LQS ++D++ N T R ++ ++ + + Sbjct: 92 IEFVVVEPASRIPFLQSDKVDLILANMTVTPERREAVDF--TNPNLRVAVQALVPQASPV 149 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 ++ L+ + V GTT +L L ++ + + FE+ E A R DAY D Sbjct: 150 KTLDDLASKTTIVTTGTTADLWLT----KNHPDWKVLKFEKNSESLQALANGRGDAYAQD 205 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 L++ P V+ + ++P+APA+ +G+ E + W + + E Sbjct: 206 NLVLFSWAK--KNPGYRVLEQKLGDEAPIAPAVKKGNIELRD---WVNTELARLGEEKYL 260 Query: 258 QKNINQV----SKDTTNPD 272 K +Q + T+P+ Sbjct: 261 LKLYDQYVRPELAEGTDPN 279 >gi|148997221|ref|ZP_01824875.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus pneumoniae SP11-BS70] gi|168575367|ref|ZP_02721303.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus pneumoniae MLV-016] gi|307067313|ref|YP_003876279.1| amino acid ABC transporter/signal transduction system periplasmic domain-containing protein [Streptococcus pneumoniae AP200] gi|147756921|gb|EDK63961.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus pneumoniae SP11-BS70] gi|183578414|gb|EDT98942.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus pneumoniae MLV-016] gi|306408850|gb|ADM84277.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain protein [Streptococcus pneumoniae AP200] Length = 288 Score = 192 bits (487), Expect = 8e-47, Method: Composition-based stats. Identities = 58/287 (20%), Positives = 115/287 (40%), Gaps = 26/287 (9%) Query: 1 MYKDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTGLVG 46 ++K ++ L F + + A + +IKK G L+ + Sbjct: 3 LFKPLLTVLVLAFALIFITACSSGGNAGSSSGKTTAKARTIDEIKKSGELRIAVFGDKKL 62 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F V +G ++G+D++ L+ + K++Y+ ++A R L S ++DI+ N Sbjct: 63 FGYVDNDGSYQGYDIELGNQLAQNLG---VKVKYISVDAANRAEYLISNKVDIILANFTV 119 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T R+ + A G + K I+ V QL G ++ V GTT E YF+ Sbjct: 120 TDERKKQVDFAL--PYMKVSLGVVSPKTGLITDVKQLEGKTLIVTKGTTAET----YFEK 173 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 ++ + +++ + A R DA++ D + + A L N V + + + Sbjct: 174 NHPEIKLQKYDQYSDSYQALLDGRGDAFSTDNTEVLAWALENK--GFEVGITSLGDPDTI 231 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSKDTTNPD 272 A A+ +G+ E + ++ + +K ++ DT D Sbjct: 232 AAAVQKGNQELLDFINKDIEKLGKENFFHKAYEKTLHPTYGDTAKAD 278 >gi|320324045|gb|EFW80128.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. glycinea str. B076] gi|320329010|gb|EFW85009.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330880666|gb|EGH14815.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 283 Score = 192 bits (487), Expect = 8e-47, Method: Composition-based stats. Identities = 51/258 (19%), Positives = 97/258 (37%), Gaps = 4/258 (1%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 + L + + S L + KRG L G + + A+G +GFD+D R ++ Sbjct: 15 LAASFTLANAAQAAEGSKLDAVLKRGNLVVGTGSTNAPWHFQGADGKLQGFDIDIGRIIA 74 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 +F+DPSK++++ ++ R L + ++DI + T R + Y +G Sbjct: 75 EGLFNDPSKVEFVVQSSDARIPNLLTDKVDISCQFITVTASRAQQVAFTL--PYYREGVA 132 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 ++ + L A V + + K ++ V+ + A + Sbjct: 133 LLLPANSKYKEIDDLKAAGDGVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLMYQAINS 192 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 R D D S++ L + P + S A A+ +GD +W N V+ + Sbjct: 193 GRADTAATDQSSVKYLMVQ--NPGRYRSPAFAWSPQTYACAVKRGDQDWLNFVNTALHEA 250 Query: 249 VTAEELGITQKNINQVSK 266 +T E + Q Sbjct: 251 MTGVEFPAYAASFKQWFG 268 >gi|302185657|ref|ZP_07262330.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. syringae 642] gi|330898559|gb|EGH29978.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. japonica str. M301072PT] Length = 304 Score = 192 bits (487), Expect = 8e-47, Method: Composition-based stats. Identities = 45/243 (18%), Positives = 85/243 (34%), Gaps = 8/243 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPS----KIQ 79 L IK+ G + G + F+ + A+G G+ D + AI D K++ Sbjct: 28 GTLKKIKESGTITLGHRDASIPFSYIADASGVPMGYSHDIQLKIVEAIKKDLDMPDLKVK 87 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 Y + ++ R +Q+ +D+ +T R+ + + + G + K Sbjct: 88 YNLVTSQTRIPLVQNGTVDVECGSTTNNAERQQQVDFSIGI--FEVGTRLLSKKDSSYKD 145 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L G ++ AGTT+E L M + I + E + R A+ D + Sbjct: 146 FDDLKGKNVVTTAGTTSERILKAMNADKQMGMNVISAKDHGESFQMLESGRAVAFMMDDA 205 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQ 258 L +P + + S + +GD + V A + ++ I Sbjct: 206 LLAGEMAKAKKPDDWAVTGTAQSYEIYGCMVRKGDAPFKKAVDDAIVATYKSGDINAIYS 265 Query: 259 KNI 261 K Sbjct: 266 KWF 268 >gi|257487796|ref|ZP_05641837.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331008517|gb|EGH88573.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 283 Score = 192 bits (487), Expect = 8e-47, Method: Composition-based stats. Identities = 51/258 (19%), Positives = 97/258 (37%), Gaps = 4/258 (1%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 + L + + S L + KRG L G + + A+G +GFD+D R ++ Sbjct: 15 LAASFTLVNAAQAAEGSKLDAVLKRGNLVVGTGSTNAPWHFQGADGKLQGFDIDIGRIIA 74 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 +F+DPSK++++ ++ R L + ++DI + T R + Y +G Sbjct: 75 KGLFNDPSKVEFVVQSSDARIPNLLTDKVDISCQFITVTASRAQQVAFTL--PYYREGVA 132 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 ++ + L A V + + K ++ V+ + A + Sbjct: 133 LLLPANSKYKEIDDLKAAGDGVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLMYQAINS 192 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 R D D S++ L + P + S A A+ +GD +W N V+ + Sbjct: 193 GRADTAATDQSSVKYLMVQ--NPGRYRSPAFAWSPQTYACAVKRGDQDWLNFVNTALHEA 250 Query: 249 VTAEELGITQKNINQVSK 266 +T E + Q Sbjct: 251 MTGVEFPAYAASFKQWFG 268 >gi|305432021|ref|ZP_07401188.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Campylobacter coli JV20] gi|304445105|gb|EFM37751.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Campylobacter coli JV20] Length = 259 Score = 192 bits (487), Expect = 9e-47, Method: Composition-based stats. Identities = 63/227 (27%), Positives = 101/227 (44%), Gaps = 8/227 (3%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDP 75 FTS + L IK +G L G+ + +A + A G+ KGF+VD + L+ +I D Sbjct: 21 FTSANAAEGKLEAIKAKGELVIGVKNDVPHYALLDQATGEIKGFEVDVAKMLAKSILGDE 80 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 +K++ + +NAK R L + +D + T R+ + Y D G ++ K+K Sbjct: 81 NKVKLIAVNAKTRGPLLDNGSVDAVIATFTITPERKRVYNFSE--PYYQDAVGLLVLKEK 138 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 S++ ++GA+I V TT+ + K +K F I AA A R DA++ Sbjct: 139 NYKSLADMNGATIGVAQAATTKKVINTAAKKIGVKVKFSEFPDYPSIKAALDAKRIDAFS 198 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 D S L K N+ ILPD + D + N V+ Sbjct: 199 VDKSILLGYKDENN-----EILPDSFDPQSYGIVTKKDDANFSNYVN 240 >gi|167581949|ref|ZP_02374823.1| extracellular solute-binding protein [Burkholderia thailandensis TXDOH] Length = 271 Score = 192 bits (487), Expect = 9e-47, Method: Composition-based stats. Identities = 65/278 (23%), Positives = 101/278 (36%), Gaps = 14/278 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW-KGF 59 M F + L + L + +A L DIKK G L+ F V + G Sbjct: 1 MKFKPFAAWLIGLSLAAAHAAAHADRLDDIKKAGVLRVATFDSNPPFGFVDPKTNRIVGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD+ RAL+ + K++ P N R L S ++D++ N T R + + Sbjct: 61 DVDYARALADKLG---VKLKLQPTNPANRIPFLTSGKVDLVLANFTITGERAKQVDFS-- 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I YF + KK + S QL+ I GTT E+TL + + + ++ Sbjct: 116 -IPYFASGQQFLAKKGVLKSADQLNRLRIGADKGTTNEVTLREKYPQA----TIVAYDDT 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AA RA A T D L L + + IS + +G+T Sbjct: 171 PFAFAALRAGNVQAITQDGPKLIGLLANVPDKQNYEVPAFSISNDYMGVGAPKGETRLVA 230 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277 V+ T E G + + +T + R Sbjct: 231 FVNDTL---AELEANGRAGRIYDAWFGPSTRTPLARIF 265 >gi|28869961|ref|NP_792580.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213967002|ref|ZP_03395152.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato T1] gi|301385186|ref|ZP_07233604.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato Max13] gi|302062754|ref|ZP_07254295.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato K40] gi|302130127|ref|ZP_07256117.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28853206|gb|AAO56275.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213928324|gb|EEB61869.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato T1] gi|330965316|gb|EGH65576.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. actinidiae str. M302091] gi|331014305|gb|EGH94361.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 283 Score = 192 bits (487), Expect = 1e-46, Method: Composition-based stats. Identities = 52/258 (20%), Positives = 97/258 (37%), Gaps = 4/258 (1%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 + L T + S L + KRG L G + + A+G +GFD+D R ++ Sbjct: 15 LAASFSLANTVQAAEGSKLDAVLKRGNLVVGTGSTNAPWHFQGADGKLQGFDIDIGRIIA 74 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 +F+DPSK++++ ++ R L + ++DI + T R + Y +G Sbjct: 75 KGLFNDPSKVEFVVQSSDARIPNLLTDKVDISCQFITVTASRAQQVAFTL--PYYREGVA 132 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 ++ + L A V + + K ++ V+ + A + Sbjct: 133 LLLPANSKYKEIDDLKAAGDGVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLMYQAINS 192 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 R D D S++ L + P + S A A+ +GD +W N V+ + Sbjct: 193 GRADTAATDQSSVKYLMVQ--NPGRYRSPAFAWSPQTYACAVKRGDQDWLNFVNTALHEA 250 Query: 249 VTAEELGITQKNINQVSK 266 +T E + Q Sbjct: 251 MTGVEFPAYAASFKQWFG 268 >gi|299069550|emb|CBJ40822.1| putative substrate-binding periplasmic (PBP) ABC transporter protein [Ralstonia solanacearum CMR15] Length = 298 Score = 192 bits (487), Expect = 1e-46, Method: Composition-based stats. Identities = 53/255 (20%), Positives = 97/255 (38%), Gaps = 9/255 (3%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSK 77 ++ L IK G ++ V F+ + ANG G+ +D C L AI D+ K Sbjct: 24 ASSPTLDRIKATGAIRLAHRESSVPFSYLDANGKPIGYSMDLCMRLVDAIRDNLKRPDLK 83 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 +QYL + R A+ S + D+ +T+ RE +AF Y ++ GI Sbjct: 84 VQYLQVTPATRMDAIASGKADLECASTNN--ARERREKVAFTIPHYIANGRMLVKTASGI 141 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + L G ++ G+ + +A + + E A + A+ D Sbjct: 142 HQMEDLRGKTVVSTRGSANGNLVRQLSEAGGLGITVVETADHSESFAMLADGKAQAFAMD 201 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 L +K P+++ I+ P A + + D E+ ++ AM E G Sbjct: 202 DVLLAGMKANAKNPADYAIVGKTQQVVPYAIMLSKNDPEFKKLID---AAMSRIMEDGEA 258 Query: 258 QKNINQVSKDTTNPD 272 ++ + + P+ Sbjct: 259 ERLYKKWFQQPIPPN 273 >gi|157693147|ref|YP_001487609.1| glutamine ABC transporter binding protein [Bacillus pumilus SAFR-032] gi|157681905|gb|ABV63049.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Bacillus pumilus SAFR-032] Length = 269 Score = 192 bits (487), Expect = 1e-46, Method: Composition-based stats. Identities = 56/278 (20%), Positives = 105/278 (37%), Gaps = 24/278 (8%) Query: 1 MYKD-----FFVSILCLIILFFTSFSTNASI-------LGDIKKRGFLKCGINTGLVGFA 48 M K C+ L F+ S L I+K + G+ F Sbjct: 1 MKKMKRFGLLLFMTCCIAALTACGFAEKGSTDAKQGSSLETIQKDKKMIFGVKNDTRLFG 60 Query: 49 EVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 ++GD +GFD+D +A++ I D K ++ + +K R LQ I + T Sbjct: 61 LKNPSSGDIEGFDIDIAKAIAKEILGDEGKAEFKEVTSKTRIPLLQKGDIHAIVATMTIT 120 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + + + GQ ++ K I S+ L G + G+T+ + + Sbjct: 121 EERKKEVNF--SDVYFEAGQSLLVKKGSDIQSIDDLKKGTKVLAVKGSTSSQNIREKAPE 178 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + FE +E A ++++ T D + L+ + D S + ++ + P Sbjct: 179 AS----VLEFENYQEAFTALKSNQGQVLTTDNAILFGMA---DEDSNYEVVGGTFTDEPY 231 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQ 263 A+ +GD E ++ + E I QK I + Sbjct: 232 GIAVKKGDKELTTAINKALKTLKDNGEYDKIHQKWIKK 269 >gi|324991490|gb|EGC23423.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK353] Length = 270 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 54/246 (21%), Positives = 103/246 (41%), Gaps = 14/246 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSK 77 + S+ + + I+KRG L G+ + F + + + + G ++D + ++ + K Sbjct: 27 ADSSTSQQVKAIQKRGVLNVGVKQDVPNFGYLNPDSNTYSGLEIDIAKKIAKELG---VK 83 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 I Y+P+ A+ R L + Q+D++ T R F Y D GF+++K I Sbjct: 84 INYVPVTAQTRGPLLDNGQVDMVIATFTITDER--KEIYNFTTPYYTDASGFLVNKSSKI 141 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + V L+ +I V G+ T+ L + + + + + E+ + RAHR DA + D Sbjct: 142 TDVKDLNNKTIGVVQGSITQTLLEEIAQEKKLNFKYVELGSYPELAVSLRAHRIDAISVD 201 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 S L + IL K+ + +T+ + V +E G Sbjct: 202 KSILTGYVSSKSN-----ILDYSFKKADYGVVTKKSNTQLNDYVDGLISKW---KEDGSL 253 Query: 258 QKNINQ 263 QK ++ Sbjct: 254 QKIYDK 259 >gi|315144632|gb|EFT88648.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX2141] gi|315160937|gb|EFU04954.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0645] Length = 275 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 56/285 (19%), Positives = 104/285 (36%), Gaps = 27/285 (9%) Query: 1 MYKD----FFVSILCLIILFFTSFSTNAS------------ILGDIKKRGFLKCGINTGL 44 M K +S+L L + S N + +KK G +K G+ + Sbjct: 1 MKKQNKWLAGLSLLVLAGIIVGCGSGNNDSTSKSASSNKTVTVEQLKKAGKIKVGVKEDI 60 Query: 45 VGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103 F + + +G + D R ++ I ++++ + AK R L + ++D++ Sbjct: 61 PNFGYMNPDTNKNEGMEPDIARLIAKEITGSEENVEFVGVTAKTRGPLLDNGELDMVIAT 120 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163 T R+ + Y D GF++ K+ SS+ L G +I V TT+ L Sbjct: 121 FTITDERKKTYNF--TTPYYTDEIGFLVRKEDNFSSMKDLDGKTIGVAQSATTKENLEKK 178 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 + +K+ E+ A + R DA++ D S L + IL D S Sbjct: 179 AQEEGIKFTYQELGSYPELKTALTSKRIDAFSVDKSILSGYV-----DGKTEILKDGFSP 233 Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 + +TE + ++ E+ G +K + Sbjct: 234 QEYGITTKKANTELNDYLNGLIEKW---EKDGTLEKIYQDWGLKS 275 >gi|28870257|ref|NP_792876.1| glutamine/glutamate ABC transporter periplasmic glutamine/glutamate-binding protein [Pseudomonas syringae pv. tomato str. DC3000] gi|28853504|gb|AAO56571.1| glutamine/glutamate ABC transporter, periplasmic glutamine/glutamate-binding protein [Pseudomonas syringae pv. tomato str. DC3000] gi|331016472|gb|EGH96528.1| glutamine/glutamate ABC transporter, periplasmic glutamine/glutamate-binding protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 290 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 59/288 (20%), Positives = 111/288 (38%), Gaps = 28/288 (9%) Query: 2 YKDFFVSILCLIILFF-------------TSFSTNASILGDIKKRGFLKCGINTGLVGFA 48 +K V L L + S + S L IK R L G+ + F Sbjct: 3 FKTALVLPLIAFTLLAGCDKPAEQKPVAKAAPSPSTSYLETIKARDKLIVGVFSDKPPFG 62 Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 V G + GFD D + + + D K++++ + R LQS ++D++ N T Sbjct: 63 FVNEQGQYVGFDTDLGKRFAKDLLGDEKKVEFVVVEPASRIPFLQSDKVDLILANMTVTP 122 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168 R ++ ++ + + ++ L+ + V GTT ++ L ++ Sbjct: 123 ERAEAVDFTH--PNLRVAVQALVPEASPVKTLDDLASKTTIVTTGTTADIWLT----KNH 176 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 + + FE+ E A R DAY D L++ P V+ + ++P+AP Sbjct: 177 PDWKVLKFEKNSESLQALANGRGDAYAQDNLVLFSWAK--KNPGYRVLEQKLGDEAPIAP 234 Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV----SKDTTNPD 272 A+ +G+ E + W + + E K +Q + T+P+ Sbjct: 235 AVKKGNIELRD---WVNTELTRLGEEKYLLKLYDQYVRPELAEGTDPN 279 >gi|330957762|gb|EGH58022.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 304 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 46/243 (18%), Positives = 87/243 (35%), Gaps = 8/243 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPS----KIQ 79 L IK+ G + G + F+ + A+G G+ D + AI D K++ Sbjct: 28 GTLKKIKESGTITLGHRDASIPFSYIADASGVPMGYSHDIQLKIVEAIKKDLGMPELKVK 87 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 Y + ++ R +Q+ +D+ +T + R+ + + + G + K Sbjct: 88 YNLVTSQTRIPLVQNGTVDLECGSTTNNVERQQQVDFSIGI--FEVGTRLLSKKXSSYKD 145 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L G ++ AGTT+E L M + I + E + R A+ D + Sbjct: 146 FDDLKGKNVVTTAGTTSERILKSMNADKQMGMNVISAKDHGESFQMLESGRAVAFMMDDA 205 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQ 258 L K +P + + S + +GD + V A + ++ I Sbjct: 206 LLAGEKAKAKKPDDWAVTGTAQSYEIYGCMVRKGDAPFKKAVDDAIVATYKSGDINAIYS 265 Query: 259 KNI 261 K Sbjct: 266 KWF 268 >gi|257784253|ref|YP_003179470.1| extracellular solute-binding protein family 3 [Atopobium parvulum DSM 20469] gi|257472760|gb|ACV50879.1| extracellular solute-binding protein family 3 [Atopobium parvulum DSM 20469] Length = 298 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 58/249 (23%), Positives = 105/249 (42%), Gaps = 13/249 (5%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L DIKK G + G+ + F V ANG++ G+D+ F L+ + KI Y+ + Sbjct: 52 TLDDIKKAGTVNIGVFSDKAPFGYVDANGNYAGYDIVFAERLAKDMG---VKINYIATDG 108 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 + R LQS + DI+ N T R+ + + G + I+ VSQL G Sbjct: 109 QNRVPFLQSNKADIMLANFTVTDDRKEKVDFSL--PYMKIKLGVVSPASAPITDVSQLDG 166 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 + V GTT E+ +F + K + F+ + A R DA++ D + + A Sbjct: 167 KKLIVSKGTTAEV----WFAKNAPKVELVKFDSYADAYNALLDGRGDAFSTDNTEVLAWV 222 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL--GITQKNINQ 263 + P V + D+ +A A+ +G++ ++ + E ++ + Sbjct: 223 KS--NPGFIVGIDDLGDSDTIAAAVHKGNSSLLEFINNEITGPLAEENFFHKAYEETLAP 280 Query: 264 VSKDTTNPD 272 + D +P+ Sbjct: 281 IYGDEVDPN 289 >gi|213970375|ref|ZP_03398504.1| glutamine/glutamate ABC transporter, periplasmic glutamine/glutamate-binding protein [Pseudomonas syringae pv. tomato T1] gi|301381158|ref|ZP_07229576.1| glutamine/glutamate ABC transporter, periplasmic glutamine/glutamate-binding protein [Pseudomonas syringae pv. tomato Max13] gi|302063124|ref|ZP_07254665.1| glutamine/glutamate ABC transporter, periplasmic glutamine/glutamate-binding protein [Pseudomonas syringae pv. tomato K40] gi|302132571|ref|ZP_07258561.1| glutamine/glutamate ABC transporter, periplasmic glutamine/glutamate-binding protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213924846|gb|EEB58412.1| glutamine/glutamate ABC transporter, periplasmic glutamine/glutamate-binding protein [Pseudomonas syringae pv. tomato T1] Length = 290 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 61/288 (21%), Positives = 112/288 (38%), Gaps = 28/288 (9%) Query: 2 YKDFFVSILCLIILFF-------------TSFSTNASILGDIKKRGFLKCGINTGLVGFA 48 +K V L L + S + S L IK R L G+ + F Sbjct: 3 FKTALVLPLIAFTLLAGCDKPAEQKPVAKAAPSPSTSYLETIKARDKLIVGVFSDKPPFG 62 Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 V G + GFD D + + + D K++++ + R LQS ++D++ N T Sbjct: 63 FVNEQGQYVGFDTDLGKRFAKDLLGDEKKVEFVVVEPASRIPFLQSDKVDLILANMTVTP 122 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168 R S + F ++ + + ++ L+ + V GTT ++ L ++ Sbjct: 123 ER--SEAVDFTHPNLRVAVQALVPEASPVKTLDDLASKTTIVTTGTTADIWLT----KNH 176 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 + + FE+ E A R DAY D L++ P V+ + ++P+AP Sbjct: 177 PDWKVLKFEKNSESLQALANGRGDAYAQDNLVLFSWAK--KNPGYRVLEQKLGDEAPIAP 234 Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV----SKDTTNPD 272 A+ +G+ E + W + + E K +Q + T+P+ Sbjct: 235 AVKKGNIELRD---WVNTELTRLGEEKYLLKLYDQYVRPELAEGTDPN 279 >gi|283954480|ref|ZP_06372000.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Campylobacter jejuni subsp. jejuni 414] gi|283794097|gb|EFC32846.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Campylobacter jejuni subsp. jejuni 414] Length = 259 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 61/244 (25%), Positives = 101/244 (41%), Gaps = 10/244 (4%) Query: 2 YKDFF-VSILCL-IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKG 58 K +++ L + F++ + L IK +G L G+ + +A + A G+ KG Sbjct: 4 KKSLLKLAVFALGACVAFSNANAAEGKLESIKAKGQLIVGVKNDVPHYALLDQATGEIKG 63 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 F+VD + L+ +I D KI+ + +NAK R L + ID + T R+ + Sbjct: 64 FEVDVAKLLAKSILGDDKKIKLVAVNAKTRGPLLDNGSIDAVIATFTITPERKRIYNFSE 123 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y D G ++ K+K S++ + GA+I V TT+ + + K + F Sbjct: 124 --PYYQDAVGLLVLKEKNYKSLADMKGANIGVAQAATTKKAIGEAAKKIGVDVKFSEFPD 181 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 I AA A R DA++ D S L + ILPD + D + Sbjct: 182 YPSIKAALDAKRVDAFSVDKSILLGYI-----DDKSEILPDSFDPQSYGIVTKKDDPAFA 236 Query: 239 NIVS 242 V Sbjct: 237 KYVD 240 >gi|304415625|ref|ZP_07396229.1| polar amino acid ABC transporter periplasmic amino acid-binding subunit [Candidatus Regiella insecticola LSR1] gi|304282523|gb|EFL91082.1| polar amino acid ABC transporter periplasmic amino acid-binding subunit [Candidatus Regiella insecticola LSR1] Length = 275 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 66/275 (24%), Positives = 117/275 (42%), Gaps = 18/275 (6%) Query: 2 YKDFFVSI-LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59 K F ++I L L S + N L IKK G ++ + F V + G+ Sbjct: 1 MKHFVIAITLFFTSLLIASCTPNTDKLDAIKKEGVIRIAVFDSNPPFGYVDSQTNKLVGY 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD AL++A+ K++ N R LQSK++D+++ N T R + + F Sbjct: 61 DVDIANALANALG---VKLELRATNPANRIALLQSKKVDLIAANFTITDER--AKEVDFS 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ FI K + + ++ I GT E+TL +++ I ++ Sbjct: 116 VPYFATGQKFIARKG-VLKTAEDINNLRIGADKGTVQEITLREHYPTA----KVISYDDT 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALK--LTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 A R A T D S L L ++N++ ++ I P I+K A+ +G+ Sbjct: 171 PLAFVALRNGNVQAITQDDSKLIGLLGNISNEQKADFEISPFSITKEYQGVAVAKGEKRL 230 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSK-DTTNP 271 + ++ A++ E+ G K ++ ++T P Sbjct: 231 IDAIN---VALIKLEQEGDAAKIYHRWFGPESTAP 262 >gi|237650055|ref|ZP_04524307.1| amino acid ABC transporter periplasmic protein [Streptococcus pneumoniae CCRI 1974] gi|237822716|ref|ZP_04598561.1| amino acid ABC transporter periplasmic protein [Streptococcus pneumoniae CCRI 1974M2] gi|332075991|gb|EGI86457.1| putative amino-acid transporter periplasmic solute-binding protein [Streptococcus pneumoniae GA41301] Length = 288 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 57/287 (19%), Positives = 114/287 (39%), Gaps = 26/287 (9%) Query: 1 MYKDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTGLVG 46 ++K ++ L F + + A + +IKK G L+ + Sbjct: 3 LFKPLLTVLVLAFALIFITACSSGGNAGSSSGKTTAKARTIDEIKKSGELRIAVFGDKKL 62 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F V +G ++G+D++ L+ + K++Y+ ++A R L S ++DI+ N Sbjct: 63 FGYVDNDGSYQGYDIELGNQLAQDLG---VKVKYISVDAANRAEYLISNKVDIILANFTV 119 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T R+ + A G + K I+ V QL G ++ V GTT E YF+ Sbjct: 120 TDERKKQVDFAL--PYMKVSLGVVSPKTGLITDVKQLEGKTLIVTKGTTAET----YFEK 173 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 ++ + +++ + A R DA++ D + + A L N V + + + Sbjct: 174 NHPEIKLQKYDQYSDSYQALLDGRGDAFSTDNTEVLAWALENK--GFEVGITSLGDPDTI 231 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSKDTTNPD 272 A A+ +G+ E + ++ + +K ++ D D Sbjct: 232 AAAVQKGNQELLDFINKDIEKLGKENFFHKAYEKTLHPTYGDAAKAD 278 >gi|325690800|gb|EGD32801.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK115] gi|325696131|gb|EGD38022.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK160] Length = 270 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 54/246 (21%), Positives = 103/246 (41%), Gaps = 14/246 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSK 77 + S+ + + I+KRG L G+ + F + + + + G ++D + ++ + K Sbjct: 27 ADSSTSQQVKAIQKRGVLNVGVKQDVPNFGYLNPDSNTYSGLEIDIAKKIAKELG---VK 83 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 I Y+P+ A+ R L + Q+D++ T R F Y D GF+++K I Sbjct: 84 INYVPVTAQTRGPLLDNGQVDMVIATFTITDER--KEIYNFTTPYYTDASGFLVNKSSKI 141 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + V L+ +I V G+ T+ L + + + + + E+ + RAHR DA + D Sbjct: 142 TDVKDLNNKTIGVVQGSITQTLLEEIAQEKKLNFKYVELGSYPELAVSLRAHRIDAISVD 201 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 S L + IL K+ + +T+ + V +E G Sbjct: 202 KSILTGYVSSKSN-----ILDYSFKKADYGVVTKKSNTQLNDYVDSLISKW---KEDGSL 253 Query: 258 QKNINQ 263 QK ++ Sbjct: 254 QKLYDK 259 >gi|300313151|ref|YP_003777243.1| glutamate/aspartate ABC transporter periplasmic protein [Herbaspirillum seropedicae SmR1] gi|300075936|gb|ADJ65335.1| ABC-type glutamate/aspartate transport system, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 315 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 43/277 (15%), Positives = 98/277 (35%), Gaps = 11/277 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M +L + +S L IK G L G+ + F+ + ++G Sbjct: 1 MKLLKLAGVLVGASVLMSSVHAEEFTGRLKKIKDSGTLTLGVRDSSIPFSYLDDKQSYQG 60 Query: 59 FDVDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + +D C ++AI I+ +P+ + R + + DI + R + Sbjct: 61 YSIDLCLKAATAIQKKLGLTSLNIKMVPVTSATRIPLIANGTTDISCDSATNNQERWNQV 120 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + + F+ K + ++ L G ++ +GT+ + N+ + + Sbjct: 121 AFSVTE--FVTANKFLSKKAANLKTLEDLKGKTVVSTSGTSNLKQITALNAERNLGMNIL 178 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + E R A+ D L +L + P ++ + + +S P + +GD Sbjct: 179 AAKDHAEAFLMVETGRAAAFVMDDILLSSLAANSKAPGDYQVSSEALSVEPYGLILPKGD 238 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 E+ +V + +++ +K + + P Sbjct: 239 KEFKTVVDDALTVVYKGDDI---KKIYAKWFQSPIPP 272 >gi|218532217|ref|YP_002423033.1| extracellular solute-binding protein family 3 [Methylobacterium chloromethanicum CM4] gi|218524520|gb|ACK85105.1| extracellular solute-binding protein family 3 [Methylobacterium chloromethanicum CM4] Length = 303 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 43/247 (17%), Positives = 87/247 (35%), Gaps = 8/247 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD----DPSKIQ 79 + L +K + G V F+ + N G+ + C ++ A+ D +++ Sbjct: 27 SGTLKKVKDTDTITIGYRDASVPFSYLDGNQKPVGYAFEICLKVADAVKAHLKLDTLEVR 86 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 P+ + R + + ID+ +T R+ + F+ + KG+ Sbjct: 87 LNPVTSATRIPLIANGTIDLECGSTTNNADRQRQAAF--TNTHFLTATRFVAKRDKGLDK 144 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L G ++ +GTT + + A + + + E R DA+ D Sbjct: 145 TDDLKGRTVVSTSGTTNIRQINEINTARGLGMRILPAKDHAEAFLMVETGRADAFVTDDV 204 Query: 200 ALYALKLTNDRPSEHVILPDIIS-KSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE-LGIT 257 L AL + P + I + S P + + D + +V A+ + E + Sbjct: 205 LLAALVAGSKTPDAYAISSEAQSRPEPYGIMLRKDDPAFKAVVDAATAALYKSPEGTALY 264 Query: 258 QKNINQV 264 +K Q Sbjct: 265 EKWFTQA 271 >gi|229587795|ref|YP_002869914.1| putative amino acid ABC transporter substrate-binding protein [Pseudomonas fluorescens SBW25] gi|229359661|emb|CAY46509.1| putative amino acid ABC transport system, substrate-binding protein [Pseudomonas fluorescens SBW25] Length = 284 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 59/258 (22%), Positives = 107/258 (41%), Gaps = 17/258 (6%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 + S + IK R L G+ T F V G + GFD D R + + D +K++ Sbjct: 28 TAAAVSYIDKIKARDKLIVGVFTDKPPFGFVNEAGRYVGFDTDIGRRFAKDLLGDENKVE 87 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 ++ + R LQS ++D++ N T R+ ++ ++ + + S Sbjct: 88 FVAVEPASRIPFLQSDKVDLILANMTVTPERKEAVDF--TNPNLKVAVQALVPQDSSVKS 145 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L+ + V GTT ++ L H+ + + FE+ E A A R DAY D Sbjct: 146 LDDLATRTTIVTTGTTADIWLT----KHHPDWKLLKFEKNSESLQALSAGRGDAYAQDNL 201 Query: 200 ALYALKLTNDRPSEHVILPDIISKS-PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 L++ N + +L + + P+APA+ +G+ E + W + + E Sbjct: 202 VLFSWAKQNPG---YRVLEEKLGDEAPIAPAVKKGNVELRD---WVNAELAKLGEEKFLL 255 Query: 259 KNINQVSK----DTTNPD 272 K +Q + D T P+ Sbjct: 256 KLYDQYVRKELSDDTQPE 273 >gi|325956804|ref|YP_004292216.1| glutamine ABC transporter substrate-binding protein [Lactobacillus acidophilus 30SC] gi|325333369|gb|ADZ07277.1| glutamine ABC transporter substrate-binding protein [Lactobacillus acidophilus 30SC] Length = 289 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 68/293 (23%), Positives = 121/293 (41%), Gaps = 39/293 (13%) Query: 4 DFFVSILCLIIL------FFTSFSTNASILG----------DIKKRGFLKCGINTGLVGF 47 ++ +S+L +I++ FT N+ L +IK+RG+++ + L + Sbjct: 8 NWIISVLAIILVVVSAYFGFTQKGLNSGTLASRWNSQNGVSEIKRRGYIRVAVFGDLPPY 67 Query: 48 AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 V ++G G+DV R ++ + KI+++ +NA R L S + DI+ N T Sbjct: 68 GWVNSDGKRVGYDVYLARRMAKDLG---VKIRFVQVNANNRVDTLNSNKADIVLANFTVT 124 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 R + + G I K I S SQL + V GTT E +YF Sbjct: 125 PER--KEVVDYAKPYMKVSVGVISPKSAPIKSASQLKNKKLIVTKGTTAE----NYFTKQ 178 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 + + F+ + A + R A D S LYA P V + I K ++ Sbjct: 179 G-NVNLLKFDSKTQQFNALKNGRGAALADDNSYLYAWVKQ--NPKYTVGIKSIGPKQYIS 235 Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGID 280 PA+ +G+ +++ W + IT+ N + N +++++ G D Sbjct: 236 PAVKKGN---RSLLRWANRE--------ITKLNKESFFVEDYNKELRQYFGKD 277 >gi|212716832|ref|ZP_03324960.1| hypothetical protein BIFCAT_01775 [Bifidobacterium catenulatum DSM 16992] gi|212660117|gb|EEB20692.1| hypothetical protein BIFCAT_01775 [Bifidobacterium catenulatum DSM 16992] Length = 301 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 59/250 (23%), Positives = 102/250 (40%), Gaps = 14/250 (5%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 A L +IKK G LK + + F + G G+DV F L + K++Y + Sbjct: 54 ARTLDEIKKSGELKVAVFSDKAPFGYIDKEGKNAGYDVYFAERLGKDLG---VKVKYTSV 110 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 + R L S ++DI N T R+ + A G + + I+ VSQL Sbjct: 111 DPAARVDVLTSNKVDITLANFTVTDERKEKVDFA--KPYMKVALGVVSPENAEITDVSQL 168 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 G ++ + GTT E YF+ + +++ + A R DA++ D + + A Sbjct: 169 KGKTLIIAKGTTAES----YFEKNEPDVKLQKYDQYADAYNALLDGRGDAFSTDNTEVLA 224 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 +N V + + + +APA+ +G+ E +W + +V + K+ Q Sbjct: 225 WAKSNK--GFKVGITKLGDEDTIAPAVQKGNKELL---NWLNDEIVKLGKENFFHKDYEQ 279 Query: 264 VSKDTTNPDV 273 K DV Sbjct: 280 TLKPVYGSDV 289 >gi|332041344|gb|EGI77706.1| extracellular solute-binding protein family 3 [Hylemonella gracilis ATCC 19624] Length = 280 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 66/275 (24%), Positives = 112/275 (40%), Gaps = 17/275 (6%) Query: 1 MYKDFFVSILC---LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DW 56 M K F +++ IL + + +A L DIKK+G L GI + V + Sbjct: 1 MRKRTFNTLIASAFAAILSLGAVTAHADQLADIKKKGVLVFGILGIDEPNSFVDPKTRQY 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G+++D A++ I K ++ + R LQ +D+L+ + RE + Sbjct: 61 IGYEIDLANAIAQKIG---VKAEFKQVAVAARIPELQQGHVDLLAASLTHNKEREALIDF 117 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + G ++ KK GI+SV QL G + G T E L + F Sbjct: 118 GL--THFVTGSKVLVTKKSGITSVQQLGGKKVVTVKGGTQEPNLKRAVPTA----EVVTF 171 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDT 235 E ++ A + + AY D S+LY+ L + ++V+LP+ ++ PLA I +G+T Sbjct: 172 ESTQQAFLALQQGKGVAYVNDESSLYSDVLKLGPKAKDYVVLPENLNVEPLAIGIKKGET 231 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 +V T E G K + + Sbjct: 232 ALKAVVDQTLR---ELESSGAADKLYEKWYGQGSK 263 >gi|17549361|ref|NP_522701.1| substrate-binding periplasmic (PBP) ABC transporter protein [Ralstonia solanacearum GMI1000] gi|17431614|emb|CAD18291.1| probable substrate-binding periplasmic (pbp) abc transporter protein [Ralstonia solanacearum GMI1000] Length = 298 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 53/258 (20%), Positives = 98/258 (37%), Gaps = 9/258 (3%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD---- 74 + ++ L IK G ++ V F+ + ANG G+ +D C L AI D+ Sbjct: 21 NAVASSPTLDHIKATGAIRLAHRESSVPFSYLDANGKPIGYSMDLCMRLVDAIRDNLKRP 80 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 K+QYL + R A+ S + D+ +T+ RE +AF Y ++ Sbjct: 81 DLKVQYLQVTPATRMDAIMSGKADLECASTNN--ARERREKVAFTIPHYIANGRMLVKTA 138 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 GI + L G ++ G+ + +A + + E A + A+ Sbjct: 139 SGIHQLEDLRGKTVVSTRGSANGNLVRQLSEAGGLGITVVEAGDHGESFAMLAEGKAQAF 198 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D L +K P+++ I+ P A + + D E+ ++ AM E Sbjct: 199 AMDDVLLAGMKANAKNPADYAIVGKTQQVVPYAIMLSKNDPEFKKLID---AAMSRLMED 255 Query: 255 GITQKNINQVSKDTTNPD 272 G ++ + + P+ Sbjct: 256 GEAERLYKKWFQQPIPPN 273 >gi|330890817|gb|EGH23478.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. mori str. 301020] Length = 283 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 50/258 (19%), Positives = 97/258 (37%), Gaps = 4/258 (1%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 + L + + S L + KRG L G + + A+G +GFD+D R ++ Sbjct: 15 LAASFTLANAAQAAEGSKLDAVLKRGNLVVGTGSTNAPWHFQGADGKLQGFDIDIGRIIA 74 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 +F+DPSK++++ ++ R L + ++DI + T R + Y +G Sbjct: 75 KGLFNDPSKVEFVVQSSDARIPNLLTDKVDISCQFITVTASRAQQVAFTL--PYYREGVA 132 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 ++ + L A V + + K ++ V+ + A + Sbjct: 133 LLLPANSKYKEIDDLKAAGDGVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLMYQAINS 192 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 R D D S++ L + P + + A A+ +GD +W N V+ + Sbjct: 193 GRADTAATDQSSVKYLMVQ--NPGRYRSPAFAWNPQTYACAVKRGDQDWLNFVNTALHEA 250 Query: 249 VTAEELGITQKNINQVSK 266 +T E + Q Sbjct: 251 MTGVEFPAYAASFKQWFG 268 >gi|283785107|ref|YP_003364972.1| putative periplasmic solute-binding protein of ABC transporter [Citrobacter rodentium ICC168] gi|282948561|emb|CBG88152.1| putative periplasmic solute-binding protein of ABC transporter [Citrobacter rodentium ICC168] Length = 272 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 63/278 (22%), Positives = 102/278 (36%), Gaps = 16/278 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59 M K + ++ T + A L DIK G LK F V G+ Sbjct: 4 MKKSPL-AFGVMLAAALTVTAAQADQLADIKAAGVLKVATFDANPPFGSVDPKTHQIVGY 62 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVDF AL+ ++ K++ + N R LQS + D++ + T R + Sbjct: 63 DVDFANALAQSLG---VKLELVATNPANRIPLLQSGKADLIVADITITPERARVIDF--S 117 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ F++ + + S A I GTT E L F + + ++ + Sbjct: 118 VPYFVTGQQFLVPATSPDK-LEEYSRARIGAVKGTTGEQALHQRFP----QSRVLAYDDI 172 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 A R A T D + L L + ILPD++SK + + +G+ Sbjct: 173 PLAFTALRNGNVQAITQDSTILAGLLGGAPDKANFKILPDLLSKEEIGVGVKKGEPALLK 232 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKD-TTNPDVQRF 276 V+ ++ E G K + T NP + F Sbjct: 233 AVND---ELLKLEANGQAAKIYDAWFGPQTKNPQPRSF 267 >gi|330901546|gb|EGH32965.1| extracellular solute-binding protein [Pseudomonas syringae pv. japonica str. M301072PT] Length = 290 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 57/259 (22%), Positives = 107/259 (41%), Gaps = 15/259 (5%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 + S ++S L IK R L G+ + F V G + GFD D + + + D K Sbjct: 32 AAPSPSSSYLETIKARDKLIVGVFSDKPPFGFVNEQGQYVGFDTDLGKRFAKDLLGDEKK 91 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 I+++ + R LQS ++D++ N T R ++ ++ + + Sbjct: 92 IEFVVVEPASRIPFLQSDKVDLILANMTVTPERREAVDF--TNPNLRVAVQALVPQASPV 149 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 ++ L+ + V GTT +L L ++ + + FE+ E A R DAY D Sbjct: 150 KTLDDLASKTTIVTTGTTADLWLT----KNHPDWKVLKFEKNSESLQALANGRGDAYAQD 205 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 L++ P V+ + ++P+APA+ +G+ E + W + + E Sbjct: 206 NLVLFSWAK--KNPGYRVLEQKLGDEAPIAPAVKKGNIELRD---WVNIELARLGEEKYL 260 Query: 258 QKNINQV----SKDTTNPD 272 K +Q + T+P+ Sbjct: 261 LKLYDQYVRPELAEGTDPN 279 >gi|327461008|gb|EGF07341.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK1057] Length = 270 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 54/246 (21%), Positives = 103/246 (41%), Gaps = 14/246 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSK 77 + S+ + + I+KRG L G+ + F + + + + G ++D + ++ + K Sbjct: 27 ADSSTSQQVKAIQKRGVLNVGVKQDVPNFGYLNPDSNTYSGLEIDIAKKIAKELG---VK 83 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 I Y+P+ A+ R L + Q+D++ T R F Y D GF+++K I Sbjct: 84 INYVPVTAQTRGPLLDNGQVDMVIATFTITDER--KEIYNFTTPYYTDASGFLVNKSSKI 141 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + V L+ +I V G+ T+ L + + + + + E+ + RAHR DA + D Sbjct: 142 TDVKDLNNKTIGVVQGSITQTLLEEIAQEKKLNFKYVELGSYPELAVSLRAHRIDAISVD 201 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 S L + IL K+ + +T+ + V +E G Sbjct: 202 KSILTGYVSSKSN-----ILDYSFKKADYGVVTKKSNTQLNDYVDGLISKW---KEDGSL 253 Query: 258 QKNINQ 263 QK ++ Sbjct: 254 QKLYDK 259 >gi|255973158|ref|ZP_05423744.1| amino acid ABC transporter [Enterococcus faecalis T1] gi|255964176|gb|EET96652.1| amino acid ABC transporter [Enterococcus faecalis T1] Length = 275 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 53/282 (18%), Positives = 104/282 (36%), Gaps = 27/282 (9%) Query: 1 MYK--DFFVSILCLIILFF--------------TSFSTNASILGDIKKRGFLKCGINTGL 44 M K + + L++ ++ S + + +KK G +K G+ + Sbjct: 1 MKKQNKWLAGLSLLVLAGIIVGCGSGNNDSTSKSASSNKTATVEQLKKAGKIKVGVKEDI 60 Query: 45 VGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103 F + + +G + D R ++ I ++++ + AK R L + ++D++ Sbjct: 61 PNFGYMNPDTNKNEGMEPDIARLIAKEITGSEENVEFVGVTAKTRGPLLDNGELDMVIAT 120 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163 T R+ + Y D GF++ K+ SS+ L G +I V TT+ L Sbjct: 121 FTITDERKKTYNF--TTPYYTDEIGFLVRKEDNFSSMKDLDGKTIGVAQSATTKENLEKK 178 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 + +K+ E+ A + R DA++ D S L + IL D S Sbjct: 179 AQEEGIKFTYQELGSYPELKTALTSKRIDAFSVDKSILSGYV-----DGKTEILKDGFSP 233 Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 + +TE + ++ E+ G +K Sbjct: 234 QEYGITTKKANTELNDYLNGLIEKW---EKDGTLEKIYQDWG 272 >gi|161507099|ref|YP_001577053.1| glutamine ABC transporter [Lactobacillus helveticus DPC 4571] gi|160348088|gb|ABX26762.1| Glutamine ABC transporter [Lactobacillus helveticus DPC 4571] Length = 272 Score = 191 bits (485), Expect = 2e-46, Method: Composition-based stats. Identities = 52/279 (18%), Positives = 107/279 (38%), Gaps = 17/279 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55 M K FF+ L + I FT + + + + +K + G+ F + G Sbjct: 1 MKKRFFLPTLLIGIALFTLSACSQNKKQIVYQTVKSTKTINWGVKADTPLFGSMNIKTGK 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GF++D +AL+ + + +K ++ A + L+++ +D + T RE + Sbjct: 61 INGFEIDLAKALTKEMLSNNAKANFVTTTANTKIQLLKNRNVDAVIAAMTITPEREKQVD 120 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + GQ + K I +V L+ + V GTT + + + Sbjct: 121 F--SKPYFPAGQSITVAKNSKIKNVKDLNNKKVLVVKGTTAADAVKKFAPKA----EILQ 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F+ + AA +A + DA+ D L + S + ++ + P A+ +G T Sbjct: 175 FDDYGQAFAALKAGQGDAFVTDNGILVGI---LRDSSGYKLVGGNFTNQPYGIAVNKGQT 231 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 E + A+ E+ G + + + + +V+ Sbjct: 232 EMD---KQINLALTKLEKDGTYNRLLKKWFGNIPGFNVK 267 >gi|325694844|gb|EGD36749.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK150] Length = 270 Score = 191 bits (485), Expect = 2e-46, Method: Composition-based stats. Identities = 55/246 (22%), Positives = 103/246 (41%), Gaps = 14/246 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSK 77 + ST + + I+KRG L G+ + F + + + + G ++D + ++ + K Sbjct: 27 ADSTTSQQVKAIQKRGVLNVGVKQDVPNFGYLNPDSNTYSGLEIDIAKKIAKELG---VK 83 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 I Y+P+ A+ R L + Q+D++ T R F Y D GF+++K I Sbjct: 84 INYVPVTAQTRGPLLDNGQVDMVIATFTITDER--KEIYNFTTPYYTDASGFLVNKSSKI 141 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + V L+ +I V G+ T+ L + + + + + E+ + RAHR DA + D Sbjct: 142 TDVKDLNNKTIGVVQGSITQTLLEEIAQEKKLNFKYVELGSYPELAVSLRAHRIDAISVD 201 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 S L + IL K+ + +T+ + V +E G Sbjct: 202 KSILTGYVSSKSN-----ILDYSFKKADYGVVTKKSNTQLNDYVDGLISKW---KEDGSL 253 Query: 258 QKNINQ 263 QK ++ Sbjct: 254 QKLYDK 259 >gi|37524239|ref|NP_927583.1| hypothetical protein plu0219 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36783662|emb|CAE12514.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 278 Score = 191 bits (485), Expect = 2e-46, Method: Composition-based stats. Identities = 61/273 (22%), Positives = 102/273 (37%), Gaps = 17/273 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59 M ++ L + T + A L DIKK G ++ + F + G+ Sbjct: 1 MKSRVVITALLAGLTLVTG-AAKADKLDDIKKTGAVRIAVFDSNPPFGFIDPQTKKLAGY 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD A+++ + K++ P N R L SK++D+++ N T R + + Sbjct: 60 DVDIANAIANDLG---VKLELRPTNPANRLPLLASKKVDLIAANFTVTHERAKQVDFSI- 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ FI K + S + I GT E+TL +++ I ++ Sbjct: 116 -PYFATGQKFIARKGI-LKSPEDIKNLRIGADKGTVQEITLREHYPTA----KVISYDDT 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEW 237 AA R A T D + L L +E I P I++ A A +G Sbjct: 170 PLAFAALRNGNVQAITQDDAKLVGLLANVPEAQKAEFEISPFSITREYQAVAAAKGQERL 229 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 V+ T + E+ G + N+ T Sbjct: 230 VEAVNQTL---LKLEKEGEAAEIYNRWFGPETK 259 >gi|229542367|ref|ZP_04431427.1| extracellular solute-binding protein family 3 [Bacillus coagulans 36D1] gi|229326787|gb|EEN92462.1| extracellular solute-binding protein family 3 [Bacillus coagulans 36D1] Length = 280 Score = 191 bits (485), Expect = 2e-46, Method: Composition-based stats. Identities = 65/252 (25%), Positives = 111/252 (44%), Gaps = 22/252 (8%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 IKK G +K + L + V NG +G+DV + ++ + K++++ +NA R Sbjct: 41 AIKKNGTIKIAVFGDLPPYGWVDKNGGRQGYDVALAKQVAKDLG---VKVKFVQVNANSR 97 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 AL+S ++D++ N T R+ + A G + KK I++VSQL G S+ Sbjct: 98 VDALKSNKVDLVLANFTITPERKQVVDFA--KPYMKVSIGVVSPKKNPITNVSQLKGKSL 155 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 V GTT E +YF + ++ E A + R A D S LYA Sbjct: 156 IVNKGTTAE----NYFTSKQKDVKLQKYDSKTEQFNALKNGRAVALADDNSYLYAWVKN- 210 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 P V + + +APA+ +G+ ++++W + IT+ N N K+ Sbjct: 211 -HPDYTVGIKTLGPNQYIAPAVKKGN---KSLLNWMNKE--------ITKLNNNGFFKND 258 Query: 269 TNPDVQRFLGID 280 N ++ + G D Sbjct: 259 YNNNLAPYFGSD 270 >gi|329666939|gb|AEB92887.1| Glutamine ABC transporter, periplasmic glutamine-binding protein [Lactobacillus johnsonii DPC 6026] Length = 273 Score = 191 bits (485), Expect = 2e-46, Method: Composition-based stats. Identities = 48/279 (17%), Positives = 103/279 (36%), Gaps = 17/279 (6%) Query: 1 MYKDF----FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55 M + +L + L ++ ++KK + G+ F + G Sbjct: 1 MKRKLRFFSLFIVLFSVFLLSACQKNTRNVYQEVKKSNEITWGVKADTRLFGLMSIKTGK 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +GF+VD AL+ I +K ++ AK + L++ ID + T R+ + Sbjct: 61 IEGFEVDLANALTKEILGKNAKANFVQTTAKTKIPLLKNGNIDAVLAAMTITPERKKQID 120 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 ++ GQ ++ I S+ ++G + GTT + + + Sbjct: 121 F--SDPYFYAGQSLLVKDDSTIKSIKDMNGKTALAVKGTTAVANVKKFAPKA----KVLE 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F+ + A +A + A T D L + N + ++ +K P A+ +G T Sbjct: 175 FDDYGQAFTALKAGQGQAMTTDNGLLAGIATENKG---YKLVGGTYTKEPYGIAVNKGQT 231 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 + N ++ A+V ++ G + + +++ Sbjct: 232 QMKNAIN---RALVKLKKDGTYDALVKKWFSGIPGFNIK 267 >gi|16264462|ref|NP_437254.1| putative amino acid uptake ABC transporter periplasmic solute-binding protein precursor [Sinorhizobium meliloti 1021] gi|307306767|ref|ZP_07586508.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti BL225C] gi|15140599|emb|CAC49114.1| ABC transporter, periplasmic solute-binding protein [Sinorhizobium meliloti 1021] gi|306902058|gb|EFN32656.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti BL225C] Length = 280 Score = 191 bits (485), Expect = 2e-46, Method: Composition-based stats. Identities = 61/277 (22%), Positives = 106/277 (38%), Gaps = 8/277 (2%) Query: 1 MYKDFFVS---ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M F V+ + ++ +S L ++ RG L G + + A + Sbjct: 1 MISRFTVAASFVAAVLAAMPAQAQQASSKLDEVLSRGHLILGTGSTNAPWHFKSAEDKLQ 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD R ++ A+F DP KI+++ ++ R + + ++DI + T R + +A Sbjct: 61 GFDVDMGRIIAKALFGDPEKIEFVNQSSDARIPNITTGKVDITCQFMTVTGER--AQQIA 118 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F Y +G G ++ + L A V + D A + +E Sbjct: 119 FTIPYYREGVGLMLKADGKYADYEALKAAGSSVTISVLQNVYAEDMVHAALPEATVDQYE 178 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 V+ I A + R DA D S+L N + + A + +GD +W Sbjct: 179 SVDLIYQALESGRADAAATDQSSLAWYMTQNS--GRYKDAGYGWNPQTYACGVRRGDQDW 236 Query: 238 YNIVSWTHYAMVTAEELGITQKNIN-QVSKDTTNPDV 273 N V+ + +T E K+ KD T P + Sbjct: 237 LNFVNTALHEAMTGVEFDFYAKSFKTWFGKDLTPPHI 273 >gi|306823349|ref|ZP_07456724.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Bifidobacterium dentium ATCC 27679] gi|304553056|gb|EFM40968.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Bifidobacterium dentium ATCC 27679] Length = 311 Score = 191 bits (485), Expect = 2e-46, Method: Composition-based stats. Identities = 58/252 (23%), Positives = 104/252 (41%), Gaps = 14/252 (5%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 T A L +IKK G LK + + F V +G++ G+DV F L+ + + Y Sbjct: 61 TTARTLDEIKKSGELKVAVFSDKAPFGYVDKDGNYAGYDVYFAERLAKDLGVKAA---YT 117 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 ++ R L S ++D+ N T R+ + A G + + I+ VS Sbjct: 118 SVDPAARVDVLTSNKVDVTLANFTVTDERKEKVDFA--KPYMKVALGVVSPEGAEITDVS 175 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 QL G ++ V GTT E YF+ + +++ + A R DA++ D + + Sbjct: 176 QLKGKTLIVAKGTTAET----YFEKNEPDIKLQKYDQYADAYNALLDGRGDAFSTDNTEV 231 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 A +N V + + + +APA+ +G+ E + W + + + K+ Sbjct: 232 LAWAKSNK--GFKVGITKLGDEDTIAPAVQKGNKELLD---WINEEIDKLGDENFFHKDY 286 Query: 262 NQVSKDTTNPDV 273 + K DV Sbjct: 287 EETLKPVYGSDV 298 >gi|283956264|ref|ZP_06373744.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Campylobacter jejuni subsp. jejuni 1336] gi|283791984|gb|EFC30773.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Campylobacter jejuni subsp. jejuni 1336] Length = 259 Score = 190 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 60/244 (24%), Positives = 101/244 (41%), Gaps = 10/244 (4%) Query: 2 YKDFF-VSILCL-IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKG 58 K +++ L + F++ + L IK +G L G+ + +A + A G+ KG Sbjct: 4 RKSLLKLAVFALGACVAFSNANAAEGKLESIKSKGQLIVGVKNDVPHYALLDQATGEIKG 63 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 F+VD + L+ +I D KI+ + +NAK R L + +D + T R+ + Sbjct: 64 FEVDVAKLLAKSILGDDKKIKLVAVNAKTRGPLLDNGSVDAVIATFTITPERKRIYNFSE 123 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y D G ++ K+K S++ + GA+I V TT+ + + K + F Sbjct: 124 --PYYQDAIGLLVLKEKNYKSLADMKGANIGVAQAATTKKAIGEAAKKIGIDVKFSEFPD 181 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 I AA A R DA++ D S L + ILPD + D + Sbjct: 182 YPSIKAALDAKRVDAFSVDKSILLGYV-----DDKSEILPDSFEPQSYGIVTKKDDPAFA 236 Query: 239 NIVS 242 V Sbjct: 237 KYVD 240 >gi|309802692|ref|ZP_07696796.1| ABC transporter, substrate-binding protein, family 3 [Bifidobacterium dentium JCVIHMP022] gi|308220756|gb|EFO77064.1| ABC transporter, substrate-binding protein, family 3 [Bifidobacterium dentium JCVIHMP022] Length = 301 Score = 190 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 58/252 (23%), Positives = 104/252 (41%), Gaps = 14/252 (5%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 T A L +IKK G LK + + F V +G++ G+DV F L+ + + Y Sbjct: 51 TTARTLDEIKKSGELKVAVFSDKAPFGYVDKDGNYAGYDVYFAERLAKDLGVKAA---YT 107 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 ++ R L S ++D+ N T R+ + A G + + I+ VS Sbjct: 108 SVDPAARVDVLTSNKVDVTLANFTVTDERKEKVDFA--KPYMKVALGVVSPEGAEITDVS 165 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 QL G ++ V GTT E YF+ + +++ + A R DA++ D + + Sbjct: 166 QLKGKTLIVAKGTTAET----YFEKNEPDIKLQKYDQYADAYNALLDGRGDAFSTDNTEV 221 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 A +N V + + + +APA+ +G+ E + W + + + K+ Sbjct: 222 LAWAKSNK--GFKVGITKLGDEDTIAPAVQKGNKELLD---WINEEIDKLGDENFFHKDY 276 Query: 262 NQVSKDTTNPDV 273 + K DV Sbjct: 277 EETLKPVYGSDV 288 >gi|70733740|ref|YP_257380.1| glutamine/glutamate ABC transporter periplasmic glutamine/glutamate-binding protein [Pseudomonas fluorescens Pf-5] gi|68348039|gb|AAY95645.1| glutamine/glutamate ABC transporter, periplasmic glutamine/glutamate-binding protein [Pseudomonas fluorescens Pf-5] Length = 294 Score = 190 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 57/250 (22%), Positives = 105/250 (42%), Gaps = 15/250 (6%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L IK R L G+ T F V G + GFD D R + + D +K++++ + Sbjct: 45 LDKIKARDKLIVGVFTDKPPFGFVDETGRYVGFDTDIGRQFAKDLLGDENKVEFVAVEPA 104 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 R LQS ++D++ N T R+ ++ ++ + + S+ L+ Sbjct: 105 SRIPFLQSDKVDLILANMTVTPERKEAVEF--TNPNLKVAVQALVPEGSAVKSLDDLASR 162 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 + V GTT ++ L ++ + + FE+ E A R DAY D L++ Sbjct: 163 TTIVTTGTTADIWLTQ----NHPDWKLLKFEKNTESLQALANGRGDAYAQDNLILFSW-- 216 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 + P V+ + ++P+APA+ +G+ E + W + + E K +Q + Sbjct: 217 SKQNPGYRVLPQTLGEQAPIAPAVKKGNIELRD---WVNAELAKLGEEKYLLKLYDQYVR 273 Query: 267 ----DTTNPD 272 D T P+ Sbjct: 274 KELSDDTKPE 283 >gi|69246349|ref|ZP_00603905.1| extracellular solute-binding protein, family 3 [Enterococcus faecium DO] gi|257878163|ref|ZP_05657816.1| extracellular solute-binding protein [Enterococcus faecium 1,230,933] gi|257881053|ref|ZP_05660706.1| extracellular solute-binding protein [Enterococcus faecium 1,231,502] gi|257884714|ref|ZP_05664367.1| extracellular solute-binding protein [Enterococcus faecium 1,231,501] gi|257889638|ref|ZP_05669291.1| extracellular solute-binding protein [Enterococcus faecium 1,231,410] gi|258616331|ref|ZP_05714101.1| glutamine ABC transporter, substrate binding protein [Enterococcus faecium DO] gi|260559210|ref|ZP_05831396.1| extracellular solute-binding protein family 3 [Enterococcus faecium C68] gi|261207743|ref|ZP_05922428.1| extracellular solute-binding protein family 3 [Enterococcus faecium TC 6] gi|289565818|ref|ZP_06446260.1| ABC transporter glutamine-binding protein glnH [Enterococcus faecium D344SRF] gi|293554036|ref|ZP_06674636.1| glutamine-binding protein [Enterococcus faecium E1039] gi|293563130|ref|ZP_06677595.1| glutamine-binding protein [Enterococcus faecium E1162] gi|293569785|ref|ZP_06680872.1| glutamine-binding protein (GlnBP) [Enterococcus faecium E1071] gi|294619641|ref|ZP_06699063.1| glutamine-binding protein [Enterococcus faecium E1679] gi|294623308|ref|ZP_06702170.1| glutamine-binding protein [Enterococcus faecium U0317] gi|314939889|ref|ZP_07847095.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecium TX0133a04] gi|314943736|ref|ZP_07850475.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecium TX0133C] gi|314949692|ref|ZP_07853010.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecium TX0082] gi|314953238|ref|ZP_07856177.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecium TX0133A] gi|314993682|ref|ZP_07859030.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecium TX0133B] gi|314997401|ref|ZP_07862352.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecium TX0133a01] gi|68195302|gb|EAN09753.1| extracellular solute-binding protein, family 3 [Enterococcus faecium DO] gi|257812391|gb|EEV41149.1| extracellular solute-binding protein [Enterococcus faecium 1,230,933] gi|257816711|gb|EEV44039.1| extracellular solute-binding protein [Enterococcus faecium 1,231,502] gi|257820552|gb|EEV47700.1| extracellular solute-binding protein [Enterococcus faecium 1,231,501] gi|257825998|gb|EEV52624.1| extracellular solute-binding protein [Enterococcus faecium 1,231,410] gi|260074967|gb|EEW63283.1| extracellular solute-binding protein family 3 [Enterococcus faecium C68] gi|260078126|gb|EEW65832.1| extracellular solute-binding protein family 3 [Enterococcus faecium TC 6] gi|289162361|gb|EFD10219.1| ABC transporter glutamine-binding protein glnH [Enterococcus faecium D344SRF] gi|291587533|gb|EFF19410.1| glutamine-binding protein (GlnBP) [Enterococcus faecium E1071] gi|291594115|gb|EFF25567.1| glutamine-binding protein [Enterococcus faecium E1679] gi|291597276|gb|EFF28465.1| glutamine-binding protein [Enterococcus faecium U0317] gi|291601818|gb|EFF32070.1| glutamine-binding protein [Enterococcus faecium E1039] gi|291604908|gb|EFF34377.1| glutamine-binding protein [Enterococcus faecium E1162] gi|313588536|gb|EFR67381.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecium TX0133a01] gi|313591856|gb|EFR70701.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecium TX0133B] gi|313594704|gb|EFR73549.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecium TX0133A] gi|313597599|gb|EFR76444.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecium TX0133C] gi|313640852|gb|EFS05432.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecium TX0133a04] gi|313643950|gb|EFS08530.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecium TX0082] Length = 271 Score = 190 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 53/268 (19%), Positives = 100/268 (37%), Gaps = 16/268 (5%) Query: 1 MYKDFFVSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55 + K + +L + L N IL K + G+ F + + Sbjct: 4 LKKIRLIFLLGIAFLALAGCKGNGLANEDILERSKSTNEIIWGVKYDTRLFGMMDIESRT 63 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +GFDVD +A++ I D K +++ + +K R L++ ID + T R+ + Sbjct: 64 VQGFDVDIAKAITKKILGDNGKTEFVEVTSKTRIPLLKNGNIDAIIATMTITDERKKQVD 123 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTELTLADYFKAHNMKYHPI 174 + + GQ ++ K I SV L+ + ++ G+T+ + + + Sbjct: 124 F--SDVYFDAGQALLVKKGSQIKSVDDLNASTTVLAVKGSTSAANIRQHAPDA----KIL 177 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 E E A ++ + DA T D + L + N E+ ++ + P AI +G Sbjct: 178 ELENYAEAFTALQSGQGDAMTTDNAILLGIADENP---EYELVGGTFTNEPYGIAINKGQ 234 Query: 235 TEWYNIVSWTHYAMVTAEEL-GITQKNI 261 + V+ M I QK Sbjct: 235 ENFLKAVNQALEEMHADGTYDKIYQKWF 262 >gi|315927529|gb|EFV06862.1| Putative peptide ABC-transport system periplasmic peptide-binding protein [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 264 Score = 190 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 60/244 (24%), Positives = 101/244 (41%), Gaps = 10/244 (4%) Query: 2 YKDFF-VSILCL-IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKG 58 K +++ L + F++ + L IK +G L G+ + +A + A G+ KG Sbjct: 9 RKSLLKLAVFALGACVAFSNANAAEGKLESIKSKGQLIVGVKNDVPHYALLDQATGEIKG 68 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 F+VD + L+ +I D KI+ + +NAK R L + +D + T R+ + Sbjct: 69 FEVDVAKLLAKSILGDDKKIKLVAVNAKTRGPLLDNGSVDAVIATFTITPERKRIYNFSE 128 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y D G ++ K+K S++ + GA+I V TT+ + + K + F Sbjct: 129 --PYYQDAIGLLVLKEKKYKSLADMKGANIGVAQAATTKKAIGEAAKKIGIDVKFSEFPD 186 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 I AA A R DA++ D S L + ILPD + D + Sbjct: 187 YPSIKAALDAKRVDAFSVDKSILLGYV-----DDKSEILPDSFEPQSYGIVTKKDDPAFA 241 Query: 239 NIVS 242 V Sbjct: 242 KYVD 245 >gi|86150617|ref|ZP_01068839.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Campylobacter jejuni subsp. jejuni CF93-6] gi|88596800|ref|ZP_01100037.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Campylobacter jejuni subsp. jejuni 84-25] gi|218562540|ref|YP_002344319.1| bifunctional adhesin/ABC transporter aspartate/glutamate-binding protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|123336799|sp|Q0P9X8|PEB1A_CAMJE RecName: Full=Major cell-binding factor; AltName: Full=CBF1; AltName: Full=PEB1; Flags: Precursor gi|388565|gb|AAA02919.1| major cell-binding factor [Campylobacter jejuni subsp. jejuni 81-176] gi|85838878|gb|EAQ56145.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Campylobacter jejuni subsp. jejuni CF93-6] gi|88191641|gb|EAQ95613.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Campylobacter jejuni subsp. jejuni 84-25] gi|112360246|emb|CAL35041.1| aspartate/glutamate-binding ABC transporter protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284926154|gb|ADC28506.1| bifunctional adhesin/ABC transporter aspartate/glutamate-binding protein [Campylobacter jejuni subsp. jejuni IA3902] Length = 259 Score = 190 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 60/244 (24%), Positives = 101/244 (41%), Gaps = 10/244 (4%) Query: 2 YKDFF-VSILCL-IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKG 58 K +++ L + F++ + L IK +G L G+ + +A + A G+ KG Sbjct: 4 RKSLLKLAVFALGACVAFSNANAAEGKLESIKSKGQLIVGVKNDVPHYALLDQATGEIKG 63 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 F+VD + L+ +I D KI+ + +NAK R L + +D + T R+ + Sbjct: 64 FEVDVAKLLAKSILGDDKKIKLVAVNAKTRGPLLDNGSVDAVIATFTITPERKRIYNFSE 123 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y D G ++ K+K S++ + GA+I V TT+ + + K + F Sbjct: 124 --PYYQDAIGLLVLKEKKYKSLADMKGANIGVAQAATTKKAIGEAAKKIGIDVKFSEFPD 181 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 I AA A R DA++ D S L + ILPD + D + Sbjct: 182 YPSIKAALDAKRVDAFSVDKSILLGYV-----DDKSEILPDSFEPQSYGIVTKKDDPAFA 236 Query: 239 NIVS 242 V Sbjct: 237 KYVD 240 >gi|296158165|ref|ZP_06840997.1| extracellular solute-binding protein family 3 [Burkholderia sp. Ch1-1] gi|295891501|gb|EFG71287.1| extracellular solute-binding protein family 3 [Burkholderia sp. Ch1-1] Length = 337 Score = 190 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 52/273 (19%), Positives = 92/273 (33%), Gaps = 14/273 (5%) Query: 7 VSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + L + S +A L I G + G+ + F+ G G+ Sbjct: 45 LMALAAFGALSLACSAHADELTGTLKKIHDDGVVVLGVREASIPFSYFDGQGT-VGYSQT 103 Query: 63 FCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 + + K+ + + + R L + QID+ +T T+ RE + Sbjct: 104 IALQIVDEIKKTLGMPQLKVHEITVTSSNRTPMLLNNQIDLECGSTTHTVERESVAAFSN 163 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y I K GI+ L+G ++ AGT+ E L ++ Sbjct: 164 SFFQY--AVRMIARKSSGITDFQDLAGKTVVTTAGTSDERLLRRLNTDKHLNMRITSARD 221 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E A + R A+ D +Y K T+ RP + V+ + A +GD + Sbjct: 222 HLEAFGAVKDDRAVAFVMDEPIVYGFKSTDSRPDDFVVTGTPLGYEVYACMFRKGDEPFR 281 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 N+V+ T+ E ++ Q P Sbjct: 282 NLVNGVIARGQTSGE---AERLYRQWFTQPIPP 311 >gi|313497437|gb|ADR58803.1| Extracellular solute-binding protein [Pseudomonas putida BIRD-1] Length = 305 Score = 190 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 47/253 (18%), Positives = 93/253 (36%), Gaps = 11/253 (4%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPSKIQYL 81 L IK+ G + G + F+ + + G+ D A+ A+ K++Y Sbjct: 28 GTLKKIKESGTITLGHRDSSIPFSYLAGKSEPVGYSHDIQLAVVDALKKQLGTDIKVRYN 87 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG---IS 138 + ++ R +Q+ +D+ +T + R+ +G + + G + K G Sbjct: 88 LVTSQTRIPLVQNGTVDLECGSTTNNVERQQQVGFSVGI--FEVGTRLLTKVKDGQPAYK 145 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 L+G ++ AGTT+E L MK + I + E + R A+ D Sbjct: 146 DFPDLAGKNVVTTAGTTSERILKAMNADKQMKMNVISAKDHGEAFNMLESGRAVAFMMDD 205 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 + L +P++ VI S + + D + V A + E+ Sbjct: 206 ALLAGEMAKARKPADWVITGTPQSYEIYGCMVRKDDAAFKKAVDDAIVAYFKSGEVN--- 262 Query: 259 KNINQVSKDTTNP 271 K+ ++ + P Sbjct: 263 KSYDKWFQQPIPP 275 >gi|121613532|ref|YP_001000595.1| bifunctional adhesin/ABC transporter aspartate/glutamate-binding protein [Campylobacter jejuni subsp. jejuni 81-176] gi|157415178|ref|YP_001482434.1| bifunctional adhesin/ABC transporter aspartate/glutamate-binding protein [Campylobacter jejuni subsp. jejuni 81116] gi|167005526|ref|ZP_02271284.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Campylobacter jejuni subsp. jejuni 81-176] gi|146325049|sp|A1VZQ4|PEB1A_CAMJJ RecName: Full=Major cell-binding factor; AltName: Full=CBF1; AltName: Full=PEB1; Flags: Precursor gi|87248925|gb|EAQ71888.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Campylobacter jejuni subsp. jejuni 81-176] gi|157386142|gb|ABV52457.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Campylobacter jejuni subsp. jejuni 81116] gi|307747819|gb|ADN91089.1| Major cell-binding factor [Campylobacter jejuni subsp. jejuni M1] gi|315932598|gb|EFV11529.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Campylobacter jejuni subsp. jejuni 327] Length = 259 Score = 190 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 60/244 (24%), Positives = 101/244 (41%), Gaps = 10/244 (4%) Query: 2 YKDFF-VSILCL-IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKG 58 K +++ L + F++ + L IK +G L G+ + +A + A G+ KG Sbjct: 4 RKSLLKLAVFALGACVAFSNANAAEGKLESIKSKGQLIVGVKNDVPHYALLDQATGEIKG 63 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 F+VD + L+ +I D KI+ + +NAK R L + +D + T R+ + Sbjct: 64 FEVDVAKLLAKSILGDDKKIKLVAVNAKTRGPLLDNGSVDAVIATFTITPERKRIYNFSE 123 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y D G ++ K+K S++ + GA+I V TT+ + + K + F Sbjct: 124 --PYYQDAIGLLVLKEKNYKSLADMKGANIGVAQAATTKKAIGEAAKKIGIDVKFSEFPD 181 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 I AA A R DA++ D S L + ILPD + D + Sbjct: 182 YPSIKAALDAKRVDAFSVDKSILLGYV-----DDKSEILPDSFEPQSYGIVTKKDDPAFA 236 Query: 239 NIVS 242 V Sbjct: 237 KYVD 240 >gi|264676197|ref|YP_003276103.1| amino-acid ABC transporter bindingprotein ybeJ precursor [Comamonas testosteroni CNB-2] gi|262206709|gb|ACY30807.1| amino-acid ABC transporter bindingprotein ybeJ precursor [Comamonas testosteroni CNB-2] Length = 238 Score = 190 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 42/235 (17%), Positives = 88/235 (37%), Gaps = 7/235 (2%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 ++LC + + +A L ++ G + V F+ + NG G V+ + + Sbjct: 6 TVLCAALGLGFLGAAHADTLAKVRDSGRITLAYRESSVPFSYLD-NGKPIGMTVELSQTV 64 Query: 68 SSAIFD----DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 + A+ ++++ + ++ R L + ID+ +T +R +G A + Sbjct: 65 AEAVKKQLNLPALEVRWQAVTSQNRMPLLANGTIDLECGSTTNNTVRAKEVGFAIN--HF 122 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 + G ++ K GI S + L G + + GTT L + ++ + + Sbjct: 123 YTGTRLLVKKSSGIQSYADLKGKTAAITTGTTNLQVLRKANAEQGWGMNIVMAKDHADGF 182 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R A+ D LY L P + ++ D + P A + + W Sbjct: 183 LLVENDRAAAFGMDDILLYGLIANAKNPRDFHVVADALQVEPYACMLRSSSSWWM 237 >gi|300703462|ref|YP_003745064.1| amino-acid-binding periplasmic ABC transporter protein [Ralstonia solanacearum CFBP2957] gi|299071125|emb|CBJ42437.1| putative amino-acid-binding periplasmic abc transporter protein [Ralstonia solanacearum CFBP2957] Length = 284 Score = 190 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 59/251 (23%), Positives = 105/251 (41%), Gaps = 15/251 (5%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKA--NGDWKGFDVDFCRALSSAIFDDPSKIQY 80 A L DIKK+G L CG+ F+ +K + + G+DVD C A++ ++ P Sbjct: 30 KADQLSDIKKKGELVCGVLGTDEPFSFLKDPMSREIVGYDVDMCNAVAKSLGVKPV---L 86 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 L R LQ ++D+L+ + RE + + T+ GQ ++ K GI+++ Sbjct: 87 KQLAVAARIPELQQGRVDLLAASLTHNKEREAQIDFSVS--TFITGQKAMVRKDSGITTL 144 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 +QL G + G+T E + K + + F+ + A + + AY D + Sbjct: 145 AQLDGKKVLTVKGSTMEANIGKAIKNAD----IVSFDNSPQALLALQQGKGAAYVNDETT 200 Query: 201 LYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L ++ I+P +S +A I + + + V+ M E G QK Sbjct: 201 LIGNMAKLGPASKDYAIVPQNLSTEHIALGIRKNEPAFREQVNKVLLGM---EASGEAQK 257 Query: 260 NINQVSKDTTN 270 ++ TT Sbjct: 258 LFDKWFGPTTK 268 >gi|77456456|ref|YP_345961.1| extracellular solute-binding protein [Pseudomonas fluorescens Pf0-1] gi|77380459|gb|ABA71972.1| amino acid ABC transporter substrate-binding protein, PAAT family [Pseudomonas fluorescens Pf0-1] Length = 292 Score = 190 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 57/262 (21%), Positives = 106/262 (40%), Gaps = 17/262 (6%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 + + A L IK R L G+ T F V G + GFD D R + + D Sbjct: 32 VASESTAPAGYLDKIKARDKLIVGVFTDKPPFGFVNEAGRYVGFDTDIGRQFAKDLLGDE 91 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 +K++++ + R LQS ++D++ N T R+ ++ ++ + Sbjct: 92 NKVEFVAVEPASRIPFLQSDKVDLILANMTVTPERKEAVEF--TNPNLKVAVQALVPQGS 149 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 + + L+ + V GTT ++ L ++ + + FE+ E A R DAY Sbjct: 150 EVKKLDDLATRTTIVTTGTTADIWLT----KNHPDWKLLKFEKNSESLQALANGRGDAYA 205 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKS-PLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D L++ N + +L + + P+APA+ +G+ E + W + + E Sbjct: 206 QDNLVLFSWAKQNPG---YRVLDEKLGAEAPIAPAVKKGNIELRD---WVNAELAKLGEE 259 Query: 255 GITQKNINQVSK----DTTNPD 272 K +Q + D T P+ Sbjct: 260 KYLLKLYDQYVRKELSDDTKPE 281 >gi|330875049|gb|EGH09198.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 283 Score = 190 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 52/258 (20%), Positives = 98/258 (37%), Gaps = 4/258 (1%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 + L T + +S L + KRG L G + + A+G +GFD+D R ++ Sbjct: 15 LAASFSLTNTVQAAESSKLDAVLKRGNLVVGTGSTNAPWHFQGADGKLQGFDIDIGRIIA 74 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 +F+DPSK++++ ++ R L + ++DI + T R + Y +G Sbjct: 75 KGLFNDPSKVEFVVQSSDARIPNLLTDKVDISCQFITVTASRAQQVAFTL--PYYREGVA 132 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 ++ + L A V + + K ++ V+ + A + Sbjct: 133 LLLPANSKYKEIDDLKAAGDGVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLMYQAINS 192 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 R D D S++ L + P + S A A+ +GD +W N V+ + Sbjct: 193 GRADTAATDQSSVKYLMVQ--NPGRYRSPAFAWSPQTYACAVKRGDQDWLNFVNTALHEA 250 Query: 249 VTAEELGITQKNINQVSK 266 +T E + Q Sbjct: 251 MTGVEFPAYAASFKQWFG 268 >gi|154508366|ref|ZP_02044008.1| hypothetical protein ACTODO_00863 [Actinomyces odontolyticus ATCC 17982] gi|293193556|ref|ZP_06609826.1| CjaA protein [Actinomyces odontolyticus F0309] gi|153798000|gb|EDN80420.1| hypothetical protein ACTODO_00863 [Actinomyces odontolyticus ATCC 17982] gi|292819912|gb|EFF78914.1| CjaA protein [Actinomyces odontolyticus F0309] Length = 300 Score = 190 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 59/249 (23%), Positives = 107/249 (42%), Gaps = 18/249 (7%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 IK+ G + GI + F + A+G G+DV + +++ + +Y+P++A Sbjct: 52 EQIKEAGEIVIGIFSDKAPFGYIDADGKPAGYDVVYGDRIAADLGVTA---KYVPVDAAA 108 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 R L S ++DI N T R + A + G + I+ VSQL+G + Sbjct: 109 RTEVLASNKVDITLANFTVTPERAEKVDFAN--PYFKVSLGVVSPTSAEITDVSQLAGKT 166 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 + V GTT E YF+A++ + +++ + A R DA++ D + + A + Sbjct: 167 LIVTKGTTAEA----YFEANHPEVKLQKYDQYSDAYQALEDGRGDAFSTDNTEVIAWAIQ 222 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ---- 263 P V + + S +A A+ +G+T + W + +V + K+ Q Sbjct: 223 --HPGFSVGIKSLGETSYIAAAVKKGNTALLD---WLNNQLVELGQENFFHKDYEQTLAP 277 Query: 264 VSKDTTNPD 272 V D PD Sbjct: 278 VYGDAATPD 286 >gi|227890386|ref|ZP_04008191.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus johnsonii ATCC 33200] gi|227849200|gb|EEJ59286.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus johnsonii ATCC 33200] Length = 273 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 47/279 (16%), Positives = 102/279 (36%), Gaps = 17/279 (6%) Query: 1 MYKDF----FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55 M + +L + L ++ ++KK + G+ F + G Sbjct: 1 MKRKLRFFSLFIVLFSVFLLSACQKNTRNVYQEVKKSNEITWGVKADTRLFGLMSIKTGK 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +GF+VD AL+ I +K ++ AK + L++ ID + T R+ + Sbjct: 61 IEGFEVDLANALTKEILGKNAKANFVQTTAKTKIPLLKNGNIDAVLAAMTITPERKKQID 120 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 ++ GQ ++ I S+ ++G + GTT + + + Sbjct: 121 F--SDPYFYAGQSLLVKDDSTIKSIKDMNGKTALAVKGTTAVANVKKFAPKA----KVLE 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F+ + A +A + A T D L + N + ++ + P A+ +G T Sbjct: 175 FDDYGQAFTALKAGQGQAMTTDNGLLAGIATENKG---YKLVGGTYTNEPYGIAVNKGQT 231 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 + N ++ A+V ++ G + + +++ Sbjct: 232 QMRNAIN---RALVKLKKDGTYDALVKKWFSGIPGFNIK 267 >gi|325275178|ref|ZP_08141145.1| extracellular solute-binding protein [Pseudomonas sp. TJI-51] gi|324099665|gb|EGB97544.1| extracellular solute-binding protein [Pseudomonas sp. TJI-51] Length = 305 Score = 190 bits (483), Expect = 3e-46, Method: Composition-based stats. Identities = 48/253 (18%), Positives = 93/253 (36%), Gaps = 11/253 (4%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPSKIQYL 81 L IK G + G + F+ + + G+ D A+ A+ K++Y Sbjct: 28 GTLKKIKDSGTITLGHRDSSIPFSYLAGKPEPVGYSHDIQLAVVDALKKQLGTDIKVRYN 87 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG---IS 138 + ++ R +Q+ +D+ +T + R+ +G + + G + K G Sbjct: 88 LVTSQTRIPLVQNGTVDLECGSTTNNVERQQQVGFSVGI--FEVGTRLLTKVKDGQPAYK 145 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 L+G ++ AGTT+E L MK + I + E + R A+ D Sbjct: 146 DFPDLAGKNVVTTAGTTSERILKAMNADKQMKMNVISAKDHGEAFNMLESGRAVAFMMDD 205 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 + L +P++ VI S + +GD + V A + E+ Sbjct: 206 ALLAGEMAKARKPADWVITGTPQSYEIYGCMVRKGDEAFKKAVDDAIVAYFKSGEVN--- 262 Query: 259 KNINQVSKDTTNP 271 K+ ++ + P Sbjct: 263 KSYDKWFQQPIPP 275 >gi|29375695|ref|NP_814849.1| amino acid ABC transporter, amino acid-binding protein [Enterococcus faecalis V583] gi|227518374|ref|ZP_03948423.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis TX0104] gi|227552903|ref|ZP_03982952.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis HH22] gi|229546202|ref|ZP_04434927.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis TX1322] gi|229550387|ref|ZP_04439112.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis ATCC 29200] gi|255976201|ref|ZP_05426787.1| extracellular solute-binding protein [Enterococcus faecalis T2] gi|256762127|ref|ZP_05502707.1| extracellular solute-binding protein [Enterococcus faecalis T3] gi|256852769|ref|ZP_05558139.1| amino acid ABC transporter [Enterococcus faecalis T8] gi|256958616|ref|ZP_05562787.1| extracellular solute-binding protein [Enterococcus faecalis DS5] gi|256962285|ref|ZP_05566456.1| extracellular solute-binding protein [Enterococcus faecalis Merz96] gi|256965480|ref|ZP_05569651.1| extracellular solute-binding protein [Enterococcus faecalis HIP11704] gi|257078030|ref|ZP_05572391.1| extracellular solute-binding protein [Enterococcus faecalis JH1] gi|257082918|ref|ZP_05577279.1| extracellular solute-binding protein [Enterococcus faecalis E1Sol] gi|257085620|ref|ZP_05579981.1| extracellular solute-binding protein [Enterococcus faecalis Fly1] gi|257086474|ref|ZP_05580835.1| extracellular solute-binding protein [Enterococcus faecalis D6] gi|257415733|ref|ZP_05592727.1| extracellular solute-binding protein [Enterococcus faecalis AR01/DG] gi|257418948|ref|ZP_05595942.1| extracellular solute-binding protein [Enterococcus faecalis T11] gi|257422964|ref|ZP_05599954.1| ABC amino acid transporter [Enterococcus faecalis X98] gi|293383314|ref|ZP_06629229.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Enterococcus faecalis R712] gi|293387529|ref|ZP_06632078.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Enterococcus faecalis S613] gi|294780990|ref|ZP_06746342.1| putative bifunctional adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis PC1.1] gi|300859786|ref|ZP_07105874.1| putative Major cell-binding factor [Enterococcus faecalis TUSoD Ef11] gi|307268767|ref|ZP_07550135.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX4248] gi|307273810|ref|ZP_07555032.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0855] gi|307274579|ref|ZP_07555759.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX2134] gi|307278845|ref|ZP_07559908.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0860] gi|307288576|ref|ZP_07568560.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0109] gi|307291102|ref|ZP_07570987.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0411] gi|312899594|ref|ZP_07758920.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0470] gi|312905821|ref|ZP_07764841.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis DAPTO 512] gi|312909124|ref|ZP_07767983.1| putative bifunctional adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis DAPTO 516] gi|312951371|ref|ZP_07770269.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0102] gi|29343156|gb|AAO80919.1| amino acid ABC transporter, amino acid-binding protein [Enterococcus faecalis V583] gi|227074052|gb|EEI12015.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis TX0104] gi|227177975|gb|EEI58947.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis HH22] gi|229304509|gb|EEN70505.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis ATCC 29200] gi|229308726|gb|EEN74713.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis TX1322] gi|255969073|gb|EET99695.1| extracellular solute-binding protein [Enterococcus faecalis T2] gi|256683378|gb|EEU23073.1| extracellular solute-binding protein [Enterococcus faecalis T3] gi|256711228|gb|EEU26266.1| amino acid ABC transporter [Enterococcus faecalis T8] gi|256949112|gb|EEU65744.1| extracellular solute-binding protein [Enterococcus faecalis DS5] gi|256952781|gb|EEU69413.1| extracellular solute-binding protein [Enterococcus faecalis Merz96] gi|256955976|gb|EEU72608.1| extracellular solute-binding protein [Enterococcus faecalis HIP11704] gi|256986060|gb|EEU73362.1| extracellular solute-binding protein [Enterococcus faecalis JH1] gi|256990948|gb|EEU78250.1| extracellular solute-binding protein [Enterococcus faecalis E1Sol] gi|256993650|gb|EEU80952.1| extracellular solute-binding protein [Enterococcus faecalis Fly1] gi|256994504|gb|EEU81806.1| extracellular solute-binding protein [Enterococcus faecalis D6] gi|257157561|gb|EEU87521.1| extracellular solute-binding protein [Enterococcus faecalis ARO1/DG] gi|257160776|gb|EEU90736.1| extracellular solute-binding protein [Enterococcus faecalis T11] gi|257164788|gb|EEU94748.1| ABC amino acid transporter [Enterococcus faecalis X98] gi|291079337|gb|EFE16701.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Enterococcus faecalis R712] gi|291083039|gb|EFE20002.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Enterococcus faecalis S613] gi|294451936|gb|EFG20386.1| putative bifunctional adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis PC1.1] gi|300850604|gb|EFK78353.1| putative Major cell-binding factor [Enterococcus faecalis TUSoD Ef11] gi|306497756|gb|EFM67288.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0411] gi|306500483|gb|EFM69816.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0109] gi|306504516|gb|EFM73723.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0860] gi|306508731|gb|EFM77821.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX2134] gi|306509495|gb|EFM78543.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0855] gi|306514895|gb|EFM83442.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX4248] gi|310628160|gb|EFQ11443.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis DAPTO 512] gi|310630631|gb|EFQ13914.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0102] gi|311290548|gb|EFQ69104.1| putative bifunctional adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis DAPTO 516] gi|311293273|gb|EFQ71829.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0470] gi|315028076|gb|EFT40008.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX2137] gi|315031597|gb|EFT43529.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0017] gi|315034961|gb|EFT46893.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0027] gi|315148456|gb|EFT92472.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX4244] gi|315150401|gb|EFT94417.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0012] gi|315153642|gb|EFT97658.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0031] gi|315156540|gb|EFU00557.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0043] gi|315158366|gb|EFU02383.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0312] gi|315165530|gb|EFU09547.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX1302] gi|315168387|gb|EFU12404.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX1341] gi|315170970|gb|EFU14987.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX1342] gi|315174638|gb|EFU18655.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX1346] gi|315573711|gb|EFU85902.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0309B] gi|315582674|gb|EFU94865.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0309A] gi|323480358|gb|ADX79797.1| amino acid ABC transporter, amino acid-binding protein [Enterococcus faecalis 62] gi|327534750|gb|AEA93584.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis OG1RF] gi|329576390|gb|EGG57903.1| major cell-binding factor [Enterococcus faecalis TX1467] Length = 275 Score = 190 bits (483), Expect = 3e-46, Method: Composition-based stats. Identities = 56/282 (19%), Positives = 103/282 (36%), Gaps = 27/282 (9%) Query: 1 MYKD----FFVSILCLIILFFTSFSTNAS------------ILGDIKKRGFLKCGINTGL 44 M K +S+L L + S N + +KK G +K G+ + Sbjct: 1 MKKQNKWLAGLSLLVLAGIIVGCGSGNNDSTSKSASSNKTVTVEQLKKAGKIKVGVKEDI 60 Query: 45 VGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103 F + + +G + D R ++ I ++++ + AK R L + ++D++ Sbjct: 61 PNFGYMNPDTNKNEGMEPDIARLIAKEITGSEENVEFVGVTAKTRGPLLDNGELDMVIAT 120 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163 T R+ + Y D GF++ K+ SS+ L G +I V TT+ L Sbjct: 121 FTITDERKKTYNF--TTPYYTDEIGFLVRKEDNFSSMKDLDGKTIGVAQSATTKENLEKK 178 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 + +K+ E+ A + R DA++ D S L + IL D S Sbjct: 179 AQEEGIKFTYQELGSYPELKTALTSKRIDAFSVDKSILSGYV-----DGKTEILKDGFSP 233 Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 + +TE + ++ E+ G +K Sbjct: 234 QEYGITTKKANTELNDYLNGLIEKW---EKDGTLEKIYQDWG 272 >gi|148546355|ref|YP_001266457.1| extracellular solute-binding protein [Pseudomonas putida F1] gi|148510413|gb|ABQ77273.1| extracellular solute-binding protein, family 3 [Pseudomonas putida F1] Length = 305 Score = 190 bits (483), Expect = 3e-46, Method: Composition-based stats. Identities = 47/253 (18%), Positives = 93/253 (36%), Gaps = 11/253 (4%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPSKIQYL 81 L IK+ G + G + F+ + + G+ D A+ A+ K++Y Sbjct: 28 GTLKKIKESGTITLGHRDSSIPFSYLAGKPEPVGYSHDIQLAVVDALKKQLGTDIKVRYN 87 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG---IS 138 + ++ R +Q+ +D+ +T + R+ +G + + G + K G Sbjct: 88 LVTSQTRIPLVQNGTVDLECGSTTNNVERQQQVGFSVGI--FEVGTRLLTKVKDGQPAYK 145 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 L+G ++ AGTT+E L MK + I + E + R A+ D Sbjct: 146 DFPDLAGKNVVTTAGTTSERILKAMNADKQMKMNVISAKDHGEAFNMLESGRAVAFMMDD 205 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 + L +P++ VI S + + D + V A + E+ Sbjct: 206 ALLAGEMAKARKPADWVITGTPQSYEIYGCMVRKEDAAFKKAVDDAIVAYFKSGEVN--- 262 Query: 259 KNINQVSKDTTNP 271 K+ ++ + P Sbjct: 263 KSYDKWFQQPIPP 275 >gi|241663664|ref|YP_002982024.1| family 3 extracellular solute-binding protein [Ralstonia pickettii 12D] gi|240865691|gb|ACS63352.1| extracellular solute-binding protein family 3 [Ralstonia pickettii 12D] Length = 307 Score = 190 bits (483), Expect = 3e-46, Method: Composition-based stats. Identities = 40/261 (15%), Positives = 87/261 (33%), Gaps = 10/261 (3%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF--- 72 + + + L IK+ G + G + F+ G+ + + + + Sbjct: 26 STGAQAQSNDTLAKIKQSGVISVGYRESSIPFSYQADANTITGYSQEISNMIVAGVEKAV 85 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 +++ P+ ++ R LQ+ ID +T L R+ + + Y G ++ Sbjct: 86 GKKLQVKLTPITSQNRISLLQNGTIDFECGSTTNNLERQKQVAFSNNIFIY--GMLMLVK 143 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM--KYHPIVFERVEEIDAAYRAHR 190 K GI L G ++ AGTT + L K + I+ + + + R Sbjct: 144 KDSGIKDFPDLKGKTVVTTAGTTEDRILQKMNGEAKDADKMNLILAKDHGQAFLTLESGR 203 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 A+ D LY + ++ V+ + A + + D + + ++ Sbjct: 204 AVAFVMDEPLLYGERTKAKNQADWVVTGTPLQTETYACMMRKDDPAFKKVADDVIADLMK 263 Query: 251 AEELGITQKNINQVSKDTTNP 271 + G + P Sbjct: 264 S---GKANDLYKKWFLSPIPP 281 >gi|262368883|ref|ZP_06062212.1| ABC glutamate/aspartate transporter [Acinetobacter johnsonii SH046] gi|262316561|gb|EEY97599.1| ABC glutamate/aspartate transporter [Acinetobacter johnsonii SH046] Length = 316 Score = 190 bits (483), Expect = 3e-46, Method: Composition-based stats. Identities = 44/263 (16%), Positives = 95/263 (36%), Gaps = 11/263 (4%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIF 72 + ++ + L IKK G + G + F+ + G+ D + A+ Sbjct: 35 AASTGADASQSGTLDKIKKSGTIVLGYRDSSIPFSYIADNPNQPVGYAHDLQLKVVEAVK 94 Query: 73 DDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 + K++Y + ++ R + + +D+ +T R+ + + + G Sbjct: 95 QKLNMPDLKVRYNLVTSQNRIPLVSNGTVDLECGSTTNNKERQQQVDFSVG--FFEVGSR 152 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 + G+ + L G + AGTT+E + + K + I + E ++ Sbjct: 153 LLTATDSGVKDFADLKGKKLVTTAGTTSERYIRQHEKELGIG-EVISAKDHAESFLMLQS 211 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 R A+ D L K P++ I+ + + +GDT + +V A Sbjct: 212 GRAAAFMMDDILLAGEKSKAKDPNKWHIVGTAPIQEVYGCMLRKGDTGFKQVVDDAIKAT 271 Query: 249 VTAEELGITQKNINQVSKDTTNP 271 ++ E+ K N+ + P Sbjct: 272 YSSGEIN---KMYNKWFEQPIPP 291 >gi|302060676|ref|ZP_07252217.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato K40] Length = 310 Score = 190 bits (483), Expect = 3e-46, Method: Composition-based stats. Identities = 44/243 (18%), Positives = 86/243 (35%), Gaps = 8/243 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPS----KIQ 79 L IK+ G + G + F+ + A+G G+ D + AI + K++ Sbjct: 30 GTLKKIKESGTITLGHRDASIPFSYIADASGIPMGYSHDIQLKIVEAIKKELDMPDLKVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 Y + ++ R +Q+ +D+ +T + R+ + + + G + K Sbjct: 90 YNLVTSQTRIPLVQNGTVDVECGSTTNNVERQQQVDFSIGI--FEVGTRLLSKKDSSYKD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L G ++ AGTT+E L M + I + E + R A+ D + Sbjct: 148 FDDLKGKNVVTTAGTTSERILKTMNADKQMGMNVISAKDHGESFQMLESGRAVAFMMDDA 207 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQ 258 L +P + + S + +GD + V A + ++ I Sbjct: 208 LLAGEMAKAKKPDDWAVTGTAQSYEIYGCMVRKGDAPFKKAVDDAIVATYKSGDINAIYS 267 Query: 259 KNI 261 K Sbjct: 268 KWF 270 >gi|312903652|ref|ZP_07762828.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0635] gi|310633005|gb|EFQ16288.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0635] gi|315577480|gb|EFU89671.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0630] Length = 287 Score = 190 bits (483), Expect = 3e-46, Method: Composition-based stats. Identities = 56/282 (19%), Positives = 103/282 (36%), Gaps = 27/282 (9%) Query: 1 MYKD----FFVSILCLIILFFTSFSTNAS------------ILGDIKKRGFLKCGINTGL 44 M K +S+L L + S N + +KK G +K G+ + Sbjct: 13 MKKQNKWLAGLSLLVLAGIIVGCGSGNNDSTSKSASSNKTVTVEQLKKAGKIKVGVKEDI 72 Query: 45 VGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103 F + + +G + D R ++ I ++++ + AK R L + ++D++ Sbjct: 73 PNFGYMNPDTNKNEGMEPDIARLIAKEITGSEENVEFVGVTAKTRGPLLDNGELDMVIAT 132 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163 T R+ + Y D GF++ K+ SS+ L G +I V TT+ L Sbjct: 133 FTITDERKKTYNF--TTPYYTDEIGFLVRKEDNFSSMKDLDGKTIGVAQSATTKENLEKK 190 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 + +K+ E+ A + R DA++ D S L + IL D S Sbjct: 191 AQEEGIKFTYQELGSYPELKTALTSKRIDAFSVDKSILSGYV-----DGKTEILKDGFSP 245 Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 + +TE + ++ E+ G +K Sbjct: 246 QEYGITTKKANTELNDYLNGLIEKW---EKDGTLEKIYQDWG 284 >gi|239817984|ref|YP_002946894.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] gi|239804561|gb|ACS21628.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] Length = 303 Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats. Identities = 48/253 (18%), Positives = 99/253 (39%), Gaps = 9/253 (3%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD----DPSKI 78 L I++ G + G+ + G + GF V+ C + + I + + Sbjct: 25 QTDTLKKIRESGAITMGVRDASGAMSFTLGPGSYTGFHVEVCERVVADIGRALQIEKIHV 84 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 +Y + + R +Q+ +DI T R+ + A P Y +G + GI Sbjct: 85 KYQLVTPQNRIALVQNGTVDIECGTTTNNAARQKDVAFA--PTLYVEGVRIAVKAASGIV 142 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 S +QLSG ++ GTT+ L + + ++ + E + R D + D Sbjct: 143 SPAQLSGKAVAATTGTTSVQLLRKLKREGAGEIAEVLAKDNSEGFLLLESGRVDGFAADG 202 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 L L + P+++ +L ++S P+A + +GD + +V + ++ + E Sbjct: 203 QILATLISKSREPAQYKLLDQVLSVEPIAIMLAKGDPAFKKLVDQSVVSLARSGE---AA 259 Query: 259 KNINQVSKDTTNP 271 + ++ P Sbjct: 260 RLYDKWFMQPIPP 272 >gi|89897023|ref|YP_520510.1| hypothetical protein DSY4277 [Desulfitobacterium hafniense Y51] gi|219667104|ref|YP_002457539.1| extracellular solute-binding protein family 3 [Desulfitobacterium hafniense DCB-2] gi|89336471|dbj|BAE86066.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219537364|gb|ACL19103.1| extracellular solute-binding protein family 3 [Desulfitobacterium hafniense DCB-2] Length = 278 Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats. Identities = 68/277 (24%), Positives = 100/277 (36%), Gaps = 31/277 (11%) Query: 1 MYK--DFFVSILCLIILFFTSFS--------------------TNASILGDIKKRGFLKC 38 M K S+ + L S A + IK RG L Sbjct: 1 MKKLGILLASVFLVGSLLAGCGSSTAQQPAQPPAQSGGGSESGAPADV-QAIKDRGALSV 59 Query: 39 GINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97 G+ + GF + GF++D +AL+ IF DPSKI+ + AK R L S + Sbjct: 60 GVKVDVPGFGYKDPKTNVIDGFEIDLVKALAEEIFGDPSKIKLQAVTAKTRGPLLDSGDV 119 Query: 98 DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157 D++ T R+ S Y DG G ++ K G S+ L G +I V T++ Sbjct: 120 DMVVATFTITEDRKKSYNF--SDPYYIDGVGLLVKKAPGYKSLKDLDGKNIGVAQSATSK 177 Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 + +K F EI AA + R DA++ D S L ++L Sbjct: 178 TAVQAEADKLGVKVKFQEFATYPEIKAALDSGRVDAFSVDRSILLGYI-----DDSTMLL 232 Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D S A G+ +V+ M EL Sbjct: 233 DDKFSPQEYGVASKLGNDGLAKLVNDKIAEMKGNGEL 269 >gi|238783035|ref|ZP_04627062.1| Extracellular solute-binding protein, family 3 [Yersinia bercovieri ATCC 43970] gi|238716036|gb|EEQ08021.1| Extracellular solute-binding protein, family 3 [Yersinia bercovieri ATCC 43970] Length = 284 Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats. Identities = 58/260 (22%), Positives = 99/260 (38%), Gaps = 16/260 (6%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSK 77 S + +A L DIK+ G ++ + F + G+DVD A++ + K Sbjct: 24 SAAAHADKLDDIKQAGVVRIAVFDSNPPFGYIDPQSKKLVGYDVDVANAIAKDLG---VK 80 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++ N R L SK++D+++ N T R + + + GQ FI HK + Sbjct: 81 VELRATNPANRIPLLTSKKVDLIAANFTITDERAKEVNFSL--PYFATGQKFIAHKG-VL 137 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + + I GT E+TL +++ I ++ A R A T D Sbjct: 138 KTPEDIRKLRIGADKGTVQEITLREHYPTA----KVISYDDTPLAFTALRNGNVQAITQD 193 Query: 198 ISALYALKLTND--RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + L L + ++ I P I+K I +G+ V+ T V E+ G Sbjct: 194 DAKLVGLLGNLPAAQKADFEISPFSITKEYQGVGIPKGEERLTATVNETL---VKLEKEG 250 Query: 256 ITQKNINQVSKDTTNPDVQR 275 K ++ TN R Sbjct: 251 EAAKIYDRWFGPATNAAQPR 270 >gi|330811359|ref|YP_004355821.1| Putative ABC transporter, periplasmic component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379467|gb|AEA70817.1| Putative ABC transporter, periplasmic component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 304 Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats. Identities = 44/245 (17%), Positives = 87/245 (35%), Gaps = 8/245 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPS----KIQ 79 L IK+ G + G + F+ + A+G G+ D + A+ D +++ Sbjct: 28 GTLKKIKESGVVTLGHRDASIPFSYIADASGKPVGYSHDIQMKVVEALKKDLDLPNLQVK 87 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 Y + ++ R +Q+ +D+ +T + R+ + + + G + K Sbjct: 88 YNLVTSQTRIPLVQNGTVDLECGSTTNNVERQQQVDFSVGI--FEIGTKLLSKKDSKYKD 145 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L G ++ AGTT+E L M + I + E + R A+ D + Sbjct: 146 FDDLKGKNVVTTAGTTSERILKAMNADKQMGMNVISAKDHGESFQMLESGRAVAFMMDDA 205 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQ 258 L + + + S + +GD + V A + E+ I + Sbjct: 206 LLAGEAAKAKKADDWAVTGTPQSYEIYGCMMRKGDEPFKKAVDDAIKATYASGEINKIYE 265 Query: 259 KNINQ 263 K Q Sbjct: 266 KWFMQ 270 >gi|213970850|ref|ZP_03398973.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato T1] gi|301384514|ref|ZP_07232932.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato Max13] gi|302130493|ref|ZP_07256483.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213924373|gb|EEB57945.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato T1] Length = 308 Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats. Identities = 44/243 (18%), Positives = 86/243 (35%), Gaps = 8/243 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPS----KIQ 79 L IK+ G + G + F+ + A+G G+ D + AI + K++ Sbjct: 28 GTLKKIKESGTITLGHRDASIPFSYIADASGIPMGYSHDIQLKIVEAIKKELDMPDLKVK 87 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 Y + ++ R +Q+ +D+ +T + R+ + + + G + K Sbjct: 88 YNLVTSQTRIPLVQNGTVDVECGSTTNNVERQQQVDFSIGI--FEVGTRLLSKKDSSYKD 145 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L G ++ AGTT+E L M + I + E + R A+ D + Sbjct: 146 FDDLKGKNVVTTAGTTSERILKTMNADKQMGMNVISAKDHGESFQMLESGRAVAFMMDDA 205 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQ 258 L +P + + S + +GD + V A + ++ I Sbjct: 206 LLAGEMAKAKKPDDWAVTGTAQSYEIYGCMVRKGDAPFKKAVDDAIVATYKSGDINAIYS 265 Query: 259 KNI 261 K Sbjct: 266 KWF 268 >gi|319940827|ref|ZP_08015166.1| extracellular solute-binding protein family 3 [Sutterella wadsworthensis 3_1_45B] gi|319805709|gb|EFW02490.1| extracellular solute-binding protein family 3 [Sutterella wadsworthensis 3_1_45B] Length = 300 Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats. Identities = 58/280 (20%), Positives = 110/280 (39%), Gaps = 14/280 (5%) Query: 1 MYK-DFFVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M+K ++ LF S +A+ L +++ G + G V F+ + A+G Sbjct: 1 MFKLSRRTAVAAATCLFALSGVVSAAELTGTLKKVQETGSITLGYRESSVPFSYLNADGK 60 Query: 56 WKGFDVDFCRALSSA----IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G+ C+ ++ A + ++Y + + R +Q+ +DI +T +L R+ Sbjct: 61 PVGYAFTVCQRVADAVKSELGLKTLDVKYQAVTSANRIPLIQNGTVDIECGSTTNSLKRQ 120 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 + + + K GI S+ L+G ++ V +GTT+ + ++ KAHN+K Sbjct: 121 REAAFSVS--YFGIQVSAAVWKSSGIKSLEDLNGKTVTVTSGTTSVALIKEFEKAHNLKI 178 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 ++ + E R DA+ D L SE IL + P Sbjct: 179 RYLMTKDFAESMQLVANKRADAFILDDVLLAGQISNLPNASEFTILDASLGVEPYGAMFR 238 Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + D + +V T M+ + EL K + + P Sbjct: 239 KDDAPFKAVVDKTVKGMIASGEL---AKLYSTWFESPIPP 275 >gi|300725186|ref|YP_003714514.1| putative amino acid ABC transporter ATP-binding protein [Xenorhabdus nematophila ATCC 19061] gi|297631731|emb|CBJ92450.1| putative amino acid-binding protein (ABC superfamily, peri_bind) [Xenorhabdus nematophila ATCC 19061] Length = 282 Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats. Identities = 62/271 (22%), Positives = 104/271 (38%), Gaps = 16/271 (5%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDV 61 K L L S A L DIKK G ++ + F + G+DV Sbjct: 6 KSRIAITALLTSLALVSGVAKADKLDDIKKAGTVRIAVFDSNPPFGFIDPRTKKLAGYDV 65 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + A++S + K++ P N R L SK+ID+++ N T R + + Sbjct: 66 EIANAIASDLG---VKLELRPTNPANRIPLLSSKKIDLIAANFTVTDERAKQVDFSI--P 120 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + GQ FI K +++ ++ I GT E+TL + + I ++ Sbjct: 121 YFATGQKFIARKG-VLTNPDDIAKLRIGADKGTVQEITLRERYPTA----KVISYDDTPL 175 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AA R A T D + L L ++ I P I++ A A+ +G+ + Sbjct: 176 AFAALRNGNVQAITQDDAKLVGLLANVPEAQKADFEISPFSITREYQAVAVTKGEGRLID 235 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 V+ T + E+ G +K N+ T Sbjct: 236 AVNQTL---LKLEKEGEAEKIYNRWFGSETK 263 >gi|307320837|ref|ZP_07600247.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti AK83] gi|306893547|gb|EFN24323.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti AK83] Length = 280 Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats. Identities = 60/277 (21%), Positives = 105/277 (37%), Gaps = 8/277 (2%) Query: 1 MYKDFFVS---ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M F V+ + ++ +S L ++ RG L G + + A + Sbjct: 1 MISKFTVAASFVAAVLAAMPAQAQQASSKLDEVLSRGHLILGTGSTNAPWHFKSAEDKLQ 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD R ++ A+F DP KI+++ ++ R + + ++DI + T R + +A Sbjct: 61 GFDVDMGRIIAKALFGDPEKIEFVNQSSDARIPNITTGKVDITCQFMTVTGER--AQQIA 118 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F Y +G ++ + L A V + D A + +E Sbjct: 119 FTIPYYREGVALMLKADGKYADYDALKAAGSSVTISVLQNVYAEDMVHAALPEATVDQYE 178 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 V+ I A + R DA D S+L N + + A + +GD +W Sbjct: 179 SVDLIYQALESGRADAAATDQSSLAWYMTQNS--GRYKDAGYGWNPQTYACGVRRGDQDW 236 Query: 238 YNIVSWTHYAMVTAEELGITQKNIN-QVSKDTTNPDV 273 N V+ + +T E K+ KD T P + Sbjct: 237 LNFVNTALHQAMTGVEFDFYAKSFKTWFGKDLTPPQI 273 >gi|300694154|ref|YP_003750127.1| substrate-binding periplasmic (pbp) ABC transporter protein [Ralstonia solanacearum PSI07] gi|299076191|emb|CBJ35504.1| putative substrate-binding periplasmic (PBP) ABC transporter protein [Ralstonia solanacearum PSI07] Length = 296 Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats. Identities = 52/258 (20%), Positives = 96/258 (37%), Gaps = 9/258 (3%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI----FDD 74 + ++ L IK G ++ V F+ + ANG G+ +D C L AI Sbjct: 19 NAVASSPTLDRIKATGTVRLAHRENSVPFSYLDANGKPIGYSMDLCMRLVDAIRESLKRP 78 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 K+QYL + R A+ S + D+ +T+ RE +AF Y ++ Sbjct: 79 DLKVQYLQVTPATRMDAIMSGRADLECASTNN--ARERREKVAFTIPHYIANGRMLVKTA 136 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 GI + L G ++ G+ + +A + + E A + A+ Sbjct: 137 SGIRQLEDLRGKTVVSTRGSANGDLVRQLSEAGGLGITVVEASDHGESFAMVAEGKAQAF 196 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D L +K P+++ I+ P A + + D E+ ++ AM E Sbjct: 197 AMDDVLLAGIKANAKNPADYAIVGKTQQVVPYAIMLSKNDPEFKKLID---AAMARVMED 253 Query: 255 GITQKNINQVSKDTTNPD 272 G ++ + + P+ Sbjct: 254 GEAERFYKKWFQQPIPPN 271 >gi|323351209|ref|ZP_08086865.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis VMC66] gi|322122433|gb|EFX94144.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis VMC66] Length = 270 Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats. Identities = 52/253 (20%), Positives = 101/253 (39%), Gaps = 11/253 (4%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSK 77 + S+ + + I+KRG L G+ + F + + + + G ++D + ++ + K Sbjct: 27 ADSSTSQQVKAIQKRGVLNVGVKQDVPNFGYLNPDSNTYSGLEIDIAKKIAKELG---VK 83 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 I Y+P+ A+ R L + Q+D++ T R F Y D GF+++K I Sbjct: 84 INYVPVTAQTRGPLLDNGQVDMVIATFTITDER--KEIYNFTTPYYTDASGFLVNKSSKI 141 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + V L+ +I V G+ T+ L + + + + + E+ + RAHR DA + D Sbjct: 142 TDVKDLNNKTIGVVQGSITQTLLEEIAQEKKLNFKYVELGSYPELAVSLRAHRIDAISVD 201 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 S L + IL K+ + +T+ + V L Sbjct: 202 KSILTGYVSSKSN-----ILDYSFKKADYGVVTKKSNTQLNDYVDGLISKWKEDSSLQKI 256 Query: 258 QKNINQVSKDTTN 270 + +T+ Sbjct: 257 YDKYDLKPSTSTD 269 >gi|315030715|gb|EFT42647.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX4000] Length = 275 Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats. Identities = 56/282 (19%), Positives = 103/282 (36%), Gaps = 27/282 (9%) Query: 1 MYKD----FFVSILCLIILFFTSFSTNAS------------ILGDIKKRGFLKCGINTGL 44 M K +S+L L + S N + +KK G +K G+ + Sbjct: 1 MKKQNKWLAGLSLLVLAGIIVGCGSGNNDSTSKSASSNKTVTVEQLKKAGKIKIGVKEDI 60 Query: 45 VGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103 F + + +G + D R ++ I ++++ + AK R L + ++D++ Sbjct: 61 PNFGYMNPDTNKNEGMEPDIARLIAKEITGSEENVEFVGVTAKTRGPLLDNGELDMVIAT 120 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163 T R+ + Y D GF++ K+ SS+ L G +I V TT+ L Sbjct: 121 FTITDERKKTYNF--TTPYYTDEIGFLVRKEDNFSSMKDLDGKTIGVAQSATTKENLEKK 178 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 + +K+ E+ A + R DA++ D S L + IL D S Sbjct: 179 AQEEGIKFTYQELGSYPELKTALTSKRIDAFSVDKSILSGYV-----DGKTEILKDGFSP 233 Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 + +TE + ++ E+ G +K Sbjct: 234 QEYGITTKKANTELNDYLNGLIEKW---EKDGTLEKIYQDWG 272 >gi|257089531|ref|ZP_05583892.1| ABC amino acid transporter [Enterococcus faecalis CH188] gi|256998343|gb|EEU84863.1| ABC amino acid transporter [Enterococcus faecalis CH188] Length = 275 Score = 190 bits (482), Expect = 4e-46, Method: Composition-based stats. Identities = 56/282 (19%), Positives = 103/282 (36%), Gaps = 27/282 (9%) Query: 1 MYKD----FFVSILCLIILFFTSFSTNAS------------ILGDIKKRGFLKCGINTGL 44 M K +S+L L + S N + +KK G +K G+ + Sbjct: 1 MKKQNKWLAGLSLLVLAGIIVGCGSGNNDSTSKSASSNKTVTVEQLKKAGKIKVGVKEDI 60 Query: 45 VGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103 F + + +G + D R ++ I ++++ + AK R L + ++D++ Sbjct: 61 PNFGYMNPDTNKNEGMEPDIARLIAKEITGSEENVKFVGVTAKTRGPLLDNGELDMVIAT 120 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163 T R+ + Y D GF++ K+ SS+ L G +I V TT+ L Sbjct: 121 FTITDERKKTYNF--TTPYYTDEIGFLVRKEDNFSSMKDLDGKTIGVAQSATTKENLEKK 178 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 + +K+ E+ A + R DA++ D S L + IL D S Sbjct: 179 AQEEGIKFTYQELGSYPELKTALTSKRIDAFSVDKSILSGYV-----DGKTEILKDGFSP 233 Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 + +TE + ++ E+ G +K Sbjct: 234 QEYGITTKKANTELNDYLNGLIEKW---EKDGTLEKIYQDWG 272 >gi|190403010|gb|ACE78173.1| periplasmic amino acid-binding protein [Campylobacter jejuni] Length = 259 Score = 190 bits (482), Expect = 4e-46, Method: Composition-based stats. Identities = 59/244 (24%), Positives = 100/244 (40%), Gaps = 10/244 (4%) Query: 2 YKDFF-VSILCL-IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKG 58 K +++ L + F++ + L IK +G L G+ + +A + A G+ KG Sbjct: 4 RKSLLKLAVFALGACVAFSNANAAEGKLESIKSKGQLIVGVKNDVPHYALLDQATGEIKG 63 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 F+VD + L+ +I D KI+ + +NAK R L + +D + T R+ + Sbjct: 64 FEVDVAKLLAKSILGDDKKIKLVAVNAKTRGPLLDNGSVDAVIATFTITPERKRIYNFSE 123 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y D G ++ K+K S++ + GA+I V TT+ + + K + F Sbjct: 124 --PYYQDAIGLLVLKEKKYKSLADMKGANIGVAQAATTKKAIGEAAKKIGIDVKFSEFPD 181 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 I AA R DA++ D S L + ILPD + D + Sbjct: 182 YPSIKAALDVKRVDAFSVDKSILLGYV-----DDKSEILPDSFEPQSYGIVTKKDDPAFA 236 Query: 239 NIVS 242 V Sbjct: 237 KYVD 240 >gi|251791764|ref|YP_003006485.1| extracellular solute-binding protein family 3 [Dickeya zeae Ech1591] gi|247540385|gb|ACT09006.1| extracellular solute-binding protein family 3 [Dickeya zeae Ech1591] Length = 278 Score = 190 bits (482), Expect = 4e-46, Method: Composition-based stats. Identities = 60/272 (22%), Positives = 99/272 (36%), Gaps = 17/272 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59 M K L L L + + A L DI+K G +K + F V G+ Sbjct: 1 MKKSLLAFSL-LAGLVSLAGNAQADKLDDIQKAGVVKVAVFDSNPPFGYVDPQSKKLVGY 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD +A+ A+ + ++ N R L SK++D+++ N T R + Sbjct: 60 DVDVAQAIGKALGVN---VELRATNPANRIPLLTSKKVDLIAANFTITDERAKQVNF--S 114 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ FI K + + + I GT E+TL +++ I ++ Sbjct: 115 VPYFATGQKFIARKG-VLKTPDDIKSLRIGADKGTVQEITLREHYPTA----KVISYDDT 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTND--RPSEHVILPDIISKSPLAPAIIQGDTEW 237 A R A T D + L L + ++ I P I+K I +G+ Sbjct: 170 PLAFTALRNGNVQAITQDDAKLVGLLGNLPAAQKADFEISPFSITKEYQGIGIPKGEDRL 229 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 V+ + E+ G K N+ T Sbjct: 230 TQKVNDIL---LNLEKQGDAVKIYNRWFGPQT 258 >gi|83746652|ref|ZP_00943701.1| Hypothetical Protein RRSL_03562 [Ralstonia solanacearum UW551] gi|207739613|ref|YP_002258006.1| amino-acid-binding periplasmic protein [Ralstonia solanacearum IPO1609] gi|83726605|gb|EAP73734.1| Hypothetical Protein RRSL_03562 [Ralstonia solanacearum UW551] gi|206592993|emb|CAQ59899.1| amino-acid-binding periplasmic protein [Ralstonia solanacearum IPO1609] Length = 288 Score = 190 bits (482), Expect = 4e-46, Method: Composition-based stats. Identities = 57/269 (21%), Positives = 102/269 (37%), Gaps = 16/269 (5%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALS 68 L + + + A L DIKK G L+ G+ F A G G DVD+ + ++ Sbjct: 25 AVLAVAVLHAPAARADRLDDIKKAGVLRVGVFDANPPFGFADAKSGQPVGLDVDYAQEIA 84 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 + K++ N R L + ++D+++ N T R + + G Sbjct: 85 RKLG---VKLELRATNPANRVPLLTAGKVDLIAANFTITDERRKQIDF--STPYFASGLQ 139 Query: 129 FIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 FI K + L G + V GTT E TL + + I ++ A Sbjct: 140 FIARKG-VLKQPDDLKKDGIRLGVDKGTTQEATLREGYPNA----RVIAYDDSPLALTAL 194 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 R+ A+ D + L AL T SE I P ++++ + + +G+T+ + V Sbjct: 195 RSGAIQAFAQDGAKLGALLATLPNRSELEISPFVLTREYMGIGVPKGETQLADTVDRILQ 254 Query: 247 AMVTAEELGITQKNINQVSKDTTNPDVQR 275 E+ G + ++ + + R Sbjct: 255 G---LEKDGTAARIYDRWFGPKSAAPLPR 280 >gi|327470645|gb|EGF16101.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK330] Length = 270 Score = 190 bits (482), Expect = 4e-46, Method: Composition-based stats. Identities = 55/246 (22%), Positives = 103/246 (41%), Gaps = 14/246 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSK 77 + S+ + + I+KRG L G+ + F + + + + G ++D + ++ + K Sbjct: 27 ADSSTSQQVKAIQKRGVLNVGVKQDVPNFGYLNPDSNTYSGLEIDIAKKIAKELG---VK 83 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 I YLP+ A+ R L + Q+D++ T R F Y D GF+++K I Sbjct: 84 INYLPVTAQTRGPLLDNGQVDMVIATFTITDER--KEIYNFTTPYYTDASGFLVNKSSKI 141 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + V L+ +I V G+ T+ L + + + + + E+ + RAHR DA + D Sbjct: 142 TDVKDLNNKTIGVVQGSITQTLLEEIAQEKKLNFKYVELGSYPELAVSLRAHRIDAISVD 201 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 S L + IL K+ + +T+ + V +E G Sbjct: 202 KSILTGYVSSKSN-----ILDYSFKKADYGVVTKKSNTQLNDYVDGLISKW---KENGSL 253 Query: 258 QKNINQ 263 QK ++ Sbjct: 254 QKLYDK 259 >gi|205356404|ref|ZP_03223169.1| probable ABC type amino-acid transporter periplasmic solute binding protein [Campylobacter jejuni subsp. jejuni CG8421] gi|205345789|gb|EDZ32427.1| probable ABC type amino-acid transporter periplasmic solute binding protein [Campylobacter jejuni subsp. jejuni CG8421] Length = 259 Score = 190 bits (482), Expect = 4e-46, Method: Composition-based stats. Identities = 59/244 (24%), Positives = 100/244 (40%), Gaps = 10/244 (4%) Query: 2 YKDFF-VSILCL-IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKG 58 K +++ L + F++ + L IK +G L G+ + +A + G+ KG Sbjct: 4 RKSLLKLAVFALGACVAFSNANAAEGKLESIKSKGQLIVGVKNDVPHYALLDQVTGEIKG 63 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 F+VD + L+ +I D KI+ + +NAK R L + +D + T R+ + Sbjct: 64 FEVDVAKLLAKSILGDDKKIKLVAVNAKTRGPLLDNGSVDAVIATFTITPERKRIYNFSE 123 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y D G ++ K+K S++ + GA+I V TT+ + + K + F Sbjct: 124 --PYYQDAIGLLVLKEKNYKSLADMKGANIGVAQAATTKKAIGEAAKKIGIDVKFSEFPD 181 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 I AA A R DA++ D S L + ILPD + D + Sbjct: 182 YPSIKAALDAKRVDAFSVDKSILLGYV-----DDKSEILPDSFEPQSYGIVTKKDDPAFA 236 Query: 239 NIVS 242 V Sbjct: 237 KYVD 240 >gi|66045410|ref|YP_235251.1| extracellular solute-binding protein [Pseudomonas syringae pv. syringae B728a] gi|63256117|gb|AAY37213.1| extracellular solute-binding protein, family 3 [Pseudomonas syringae pv. syringae B728a] Length = 304 Score = 189 bits (481), Expect = 4e-46, Method: Composition-based stats. Identities = 47/271 (17%), Positives = 95/271 (35%), Gaps = 13/271 (4%) Query: 4 DFFVSILCLIILFFTSFST-----NASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWK 57 F +IL + + S + L IK G + G + F+ + +G Sbjct: 2 RTFSAILGVTLTVALSSTALMAAEPTGTLKKIKTSGTITLGHRDSSIPFSYMADGSGQPM 61 Query: 58 GFDVDFCRALSSAI----FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ D + AI ++Y + ++ R +Q+ +D+ +T T R Sbjct: 62 GYSHDIQLKIVEAIKQELGMPKLNVRYNLVTSQTRIPLVQNGTVDLECGSTTNTAERARQ 121 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + + + ++ K L+G ++ AG+T E L M + Sbjct: 122 VDFSVGI--FEASTRLLVRKDSVYKDFQDLNGKNVVTTAGSTAERMLKVMNAEKKMNMNV 179 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + + E + R A+ D + L +P + V+ S + +G Sbjct: 180 ISAKDIGESYQMLESGRAIAFMQDDALLAGEMAKAKKPEDWVVTGTPQSNEIYGCTMRRG 239 Query: 234 DTEWYNIVSWTHYAMVTAEELG-ITQKNINQ 263 D + +V + ++ + E+ I K Q Sbjct: 240 DPDLKKVVDDSIKSLFVSGEINAIYDKWFTQ 270 >gi|315124414|ref|YP_004066418.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315018136|gb|ADT66229.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 259 Score = 189 bits (481), Expect = 4e-46, Method: Composition-based stats. Identities = 60/244 (24%), Positives = 101/244 (41%), Gaps = 10/244 (4%) Query: 2 YKDFF-VSILCL-IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKG 58 K +++ L + F++ + L IK +G L G+ + +A + A G+ KG Sbjct: 4 RKSLLKLAVFALGACVAFSNANAAEGKLESIKSKGQLIVGVKNDVPHYALLDQATGEIKG 63 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 F+VD + L+ +I D KI+ + +NAK R L + +D + T R+ + Sbjct: 64 FEVDVAKLLAKSILGDDKKIKLVAVNAKTRGPLLDNGSVDAVIATFTITPERKRIYNFSE 123 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y D G ++ K+K S++ + GA+I V TT+ + + K + F Sbjct: 124 --PYYQDAIGLLVLKEKNYKSLADMEGANIGVAQAATTKKAIGEAAKKIGIDVKFNEFPD 181 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 I AA A R DA++ D S L + ILPD + D + Sbjct: 182 YPSIKAALDAKRVDAFSVDKSILLGYV-----DDKSEILPDSFEPQSYGIVTKKDDPAFA 236 Query: 239 NIVS 242 V Sbjct: 237 KYVD 240 >gi|257887550|ref|ZP_05667203.1| extracellular solute-binding protein [Enterococcus faecium 1,141,733] gi|257898672|ref|ZP_05678325.1| extracellular solute-binding protein [Enterococcus faecium Com15] gi|257823604|gb|EEV50536.1| extracellular solute-binding protein [Enterococcus faecium 1,141,733] gi|257836584|gb|EEV61658.1| extracellular solute-binding protein [Enterococcus faecium Com15] Length = 271 Score = 189 bits (481), Expect = 4e-46, Method: Composition-based stats. Identities = 53/267 (19%), Positives = 100/267 (37%), Gaps = 16/267 (5%) Query: 2 YKDFFVSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDW 56 K + +L + L N IL K + G+ F + + Sbjct: 5 KKIRLIFLLGIAFLALAGCKGNGLANEDILERSKSTNEIIWGVKYDTRLFGMMDIESRTV 64 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +GFDVD +A++ I + K +++ + +K R L++ ID + T R+ + Sbjct: 65 QGFDVDIAKAITEKILGENGKAEFVEVTSKTRIPLLKNGNIDAIIATMTITDERKKQVDF 124 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTELTLADYFKAHNMKYHPIV 175 + + GQ ++ K I SV L+ + ++ G+T+ + + N + Sbjct: 125 --SDVYFDAGQALLVKKGSQIKSVDDLNASTTVLAVKGSTSAANIRQHAPDAN----ILE 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 E E A ++ + DA T D + L + N E+ ++ + P AI +G Sbjct: 179 LENYAEAFTALQSGQGDAMTTDNAILLGIADENP---EYELVGGTFTNEPYGIAINKGQE 235 Query: 236 EWYNIVSWTHYAMVTAEEL-GITQKNI 261 + V+ M I QK Sbjct: 236 NFLKAVNQALEEMHADGTYDKIYQKWF 262 >gi|332163540|ref|YP_004300117.1| putative periplasmic solute-binding protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325667770|gb|ADZ44414.1| putative periplasmic solute-binding protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 269 Score = 189 bits (481), Expect = 4e-46, Method: Composition-based stats. Identities = 61/267 (22%), Positives = 99/267 (37%), Gaps = 16/267 (5%) Query: 12 LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSA 70 L L S + +A L DIKK G ++ + F + + G+DVD A++ Sbjct: 2 LASLATLSGAAHADKLDDIKKEGVVRIAVFDSNPPFGYIDPHTKKLVGYDVDVANAIAKD 61 Query: 71 IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130 + K++ N R L SK++D+++ N T R + + + GQ FI Sbjct: 62 LG---VKVELRATNPANRIPLLTSKKVDLIAANFTITDDRAKEVNFSL--PYFATGQKFI 116 Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190 HK + + + I GT E+TL D + I ++ A R Sbjct: 117 AHKG-VLKTPEDIGKLRIGADKGTVQEITLRDRYPTA----KVISYDDTPVAFTALRNGN 171 Query: 191 CDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 A T D + L L ++ I P I+K I +G+ V+ T Sbjct: 172 VQAITQDDAKLVGLLGNLPEAQKADFEISPFSITKEYQGIGIPKGEDRLTAEVNETL--- 228 Query: 249 VTAEELGITQKNINQVSKDTTNPDVQR 275 V E+ G K ++ T R Sbjct: 229 VKLEKDGEAAKIYDRWFGPETKAAQPR 255 >gi|290473276|ref|YP_003466142.1| putative amino acid-binding protein (ABC superfamily, peri_bind) [Xenorhabdus bovienii SS-2004] gi|289172575|emb|CBJ79344.1| putative amino acid-binding protein (ABC superfamily, peri_bind) [Xenorhabdus bovienii SS-2004] Length = 282 Score = 189 bits (481), Expect = 4e-46, Method: Composition-based stats. Identities = 63/268 (23%), Positives = 103/268 (38%), Gaps = 16/268 (5%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFC 64 ++ L L S A L DIKK G ++ + F + G+DVD Sbjct: 9 VATVALLTSLALVSGVAKADKLDDIKKTGTVRIAVFDSNPPFGFIDPQTKKLAGYDVDIA 68 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 A++S + K++ P N R L SK+ID+++ N T R + + + Sbjct: 69 NAVASDLG---VKLELRPTNPANRIPLLSSKKIDLIAANFTITDERAKQVNFSI--PYFA 123 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 GQ FI K + + ++ I GT E+TL + + I ++ A Sbjct: 124 TGQKFIARKG-VLKTPDDIAKLRIGADKGTVQEITLRERYPTA----KVISYDDTPLAFA 178 Query: 185 AYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A R A T D + L L ++ I P I++ A A +G+ N V+ Sbjct: 179 ALRNGNVQAITQDDAKLVGLLANVPEAQKADFEISPFSITREYQAVAATKGEDRLINAVN 238 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTN 270 T + E+ G +K N+ T Sbjct: 239 QTL---LKLEKDGDAEKIYNRWFGAETK 263 >gi|83719161|ref|YP_442971.1| extracellular solute-binding protein [Burkholderia thailandensis E264] gi|167620111|ref|ZP_02388742.1| extracellular solute-binding protein [Burkholderia thailandensis Bt4] gi|257139195|ref|ZP_05587457.1| extracellular solute-binding protein [Burkholderia thailandensis E264] gi|83652986|gb|ABC37049.1| extracellular solute-binding protein [Burkholderia thailandensis E264] Length = 271 Score = 189 bits (481), Expect = 4e-46, Method: Composition-based stats. Identities = 65/278 (23%), Positives = 100/278 (35%), Gaps = 14/278 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW-KGF 59 M F + L + L + +A L DIKK G L+ F V + G Sbjct: 1 MKFKPFAAWLIGLSLAAAHAAAHADRLDDIKKAGVLRVATFDSNPPFGFVDPKTNRIVGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD+ RAL+ + K++ P N R L S ++D++ N T R + + Sbjct: 61 DVDYARALADKLG---VKLKLQPTNPANRIPFLTSGKVDLVLANFTITGERAKQVDFS-- 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I YF + KK + S QL+ I GTT E+TL + + + ++ Sbjct: 116 -IPYFASGQQFLAKKGVLKSADQLNRLRIGADKGTTNEVTLREKYPQA----TIVAYDDT 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AA RA A T D L L + + IS + +G+T Sbjct: 171 PFAFAALRAGNVQAITQDGPKLIGLLANVPDKQNYEVPAFSISNDYMGVGAPKGETRLVA 230 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277 V+ T E G + + T + R Sbjct: 231 FVNDTL---AELEANGRAGRIYDAWFGPNTRTPLARIF 265 >gi|227551336|ref|ZP_03981385.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecium TX1330] gi|257896044|ref|ZP_05675697.1| extracellular solute-binding protein [Enterococcus faecium Com12] gi|293378784|ref|ZP_06624941.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecium PC4.1] gi|227179547|gb|EEI60519.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecium TX1330] gi|257832609|gb|EEV59030.1| extracellular solute-binding protein [Enterococcus faecium Com12] gi|292642577|gb|EFF60730.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecium PC4.1] Length = 271 Score = 189 bits (481), Expect = 4e-46, Method: Composition-based stats. Identities = 53/267 (19%), Positives = 100/267 (37%), Gaps = 16/267 (5%) Query: 2 YKDFFVSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDW 56 K + +L + L N IL K + G+ F + + Sbjct: 5 KKIRLIFLLGIAFLALAGCKGNGLANEDILERSKSTNEIIWGVKYDTRLFGMMDIESRTV 64 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +GFDVD +A++ I + K +++ + +K R L++ ID + T R+ + Sbjct: 65 QGFDVDIAKAITEKILGENGKAEFVEVTSKTRIPLLKNGNIDAIIATMTITDERKKQVDF 124 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTELTLADYFKAHNMKYHPIV 175 + + GQ ++ K I SV L+ + ++ G+T+ + + N + Sbjct: 125 --SDVYFDAGQALLVKKGSRIKSVDDLNASTTVLAVKGSTSAANIRQHAPDAN----ILE 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 E E A ++ + DA T D + L + N E+ ++ + P AI +G Sbjct: 179 LENYAEAFTALQSGQGDAMTTDNAILLGIADENP---EYELVGGTFTNEPYGIAINKGQE 235 Query: 236 EWYNIVSWTHYAMVTAEEL-GITQKNI 261 + V+ M I QK Sbjct: 236 NFLKAVNQALEEMHADGTYDKIYQKWF 262 >gi|57237749|ref|YP_178997.1| bifunctional adhesin/ABC transporter aspartate/glutamate-binding protein [Campylobacter jejuni RM1221] gi|57166553|gb|AAW35332.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Campylobacter jejuni RM1221] gi|315058360|gb|ADT72689.1| Major cell-binding factor precursor PebA [Campylobacter jejuni subsp. jejuni S3] Length = 259 Score = 189 bits (481), Expect = 4e-46, Method: Composition-based stats. Identities = 59/244 (24%), Positives = 101/244 (41%), Gaps = 10/244 (4%) Query: 2 YKDFF-VSILCL-IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKG 58 K +++ L + F++ + L IK +G L G+ + +A + A G+ KG Sbjct: 4 RKSLLKLAVFALGACVAFSNANAAEGKLESIKSKGQLIVGVKNDVPYYALLDQATGEIKG 63 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 F++D + L+ +I D KI+ + +NAK R L + +D + T R+ + Sbjct: 64 FEIDVAKLLAKSILGDDKKIKLVAVNAKTRGPLLDNGSVDAVIATFTITPERKRIYNFSE 123 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y D G ++ K+K S++ + GA+I V TT+ + + K + F Sbjct: 124 --PYYQDAIGLLVLKEKNYKSLADMKGANIGVAQAATTKKAIGEAAKKIGIDVKFSEFPD 181 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 I AA A R DA++ D S L + ILPD + D + Sbjct: 182 YPSIKAALDAKRVDAFSVDKSILLGYV-----DDKSEILPDSFEPQSYGIVTKKDDPAFA 236 Query: 239 NIVS 242 V Sbjct: 237 KYVD 240 >gi|300697784|ref|YP_003748445.1| substrate-binding periplasmic (PBP) ABC transporter protein [Ralstonia solanacearum CFBP2957] gi|299074508|emb|CBJ54059.1| putative substrate-binding periplasmic (PBP) ABC transporter protein [Ralstonia solanacearum CFBP2957] Length = 279 Score = 189 bits (481), Expect = 5e-46, Method: Composition-based stats. Identities = 51/258 (19%), Positives = 96/258 (37%), Gaps = 9/258 (3%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI----FDD 74 + ++ L IK G ++ G V F+ + A G G+ +D C L AI Sbjct: 2 NAVASSPTLDRIKATGAIRLAHREGSVPFSYLDAGGKPIGYSMDLCMRLVDAIRENLKRP 61 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 K+QYL + R A+ + + D+ +T+ RE +AF Y ++ Sbjct: 62 DLKVQYLQVTPATRMDAIMNGKADLECASTNN--ARERRDKVAFTIPHYIANGRMLVKTA 119 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 GI + L G ++ G+ + +A + + E A + A+ Sbjct: 120 SGIHQLEDLRGKTVVSTRGSANGDLVRQLSEAGGLGITVVEASDHAESLAMLADGKAQAF 179 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D L +K P+++ I+ P A + + D E+ ++ AM E Sbjct: 180 AMDDVLLAGMKANTKNPADYAIVGKTQQVVPYAIMLSKNDPEFKKLID---AAMARLMED 236 Query: 255 GITQKNINQVSKDTTNPD 272 G ++ + + P+ Sbjct: 237 GEAERFYKKWFQQPIPPN 254 >gi|42518674|ref|NP_964604.1| glutamine ABC transporter solute-binding component [Lactobacillus johnsonii NCC 533] gi|41582960|gb|AAS08570.1| glutamine ABC transporter solute-binding component [Lactobacillus johnsonii NCC 533] Length = 273 Score = 189 bits (481), Expect = 5e-46, Method: Composition-based stats. Identities = 47/279 (16%), Positives = 102/279 (36%), Gaps = 17/279 (6%) Query: 1 MYKDF----FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55 M + +L + L ++ ++KK + G+ F + G Sbjct: 1 MKRKLRFFSLFIVLFSVFLLSACQKNTRNVYQEVKKSNEITWGVKADTRLFGLMSIKTGK 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +GF+VD AL+ I +K ++ AK + L++ ID + T R+ + Sbjct: 61 IEGFEVDLANALTKEILGKNAKANFVQTTAKTKIPLLKNGNIDAVLAAMTITPERKKQID 120 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 ++ GQ ++ I S+ ++G + GTT + + + Sbjct: 121 F--SDPYFYAGQSLLVKDDSTIKSIKDMNGKTALAVKGTTAVANVKKFAPKA----KVLE 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F+ + A +A + A T D L + N + ++ +K P A+ +G Sbjct: 175 FDDYGQAFTALKAGQGQAMTTDNGLLAGIATENKG---YKLVGGTYTKEPYGIAVNKGQI 231 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 + N ++ A+V ++ G + + +++ Sbjct: 232 QMKNAIN---RALVKLKKDGTYDALVKKWFSGIPGFNIK 267 >gi|86150788|ref|ZP_01069004.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Campylobacter jejuni subsp. jejuni 260.94] gi|85841958|gb|EAQ59204.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Campylobacter jejuni subsp. jejuni 260.94] Length = 259 Score = 189 bits (481), Expect = 5e-46, Method: Composition-based stats. Identities = 60/244 (24%), Positives = 101/244 (41%), Gaps = 10/244 (4%) Query: 2 YKDFF-VSILCL-IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKG 58 K +++ L + F++ + L IK +G L G+ + +A + A G+ KG Sbjct: 4 RKSLLKLAVFALGACVAFSNANAAEGKLESIKSKGQLIVGVKNDVPHYALLDQATGEIKG 63 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 F+VD + L+ +I D KI+ + +NAK R L + +D + T R+ + Sbjct: 64 FEVDVAKLLAKSILGDDKKIKLVAVNAKTRGPLLDNGSVDAVIATFTITPERKRIYNFSE 123 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y D G ++ K+K S++ + GA+I V TT+ + + K + F Sbjct: 124 --PYYQDAIGLLVLKEKNYKSLADMEGANIGVAQAATTKKAIGEAAKKIGIDVKFNEFPD 181 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 I AA A R DA++ D S L + ILPD + D + Sbjct: 182 YPSIKAALDAKRVDAFSVDKSILLGYV-----DDKSEILPDSFEPQSYGIVTKKDDPAFA 236 Query: 239 NIVS 242 V Sbjct: 237 KYVD 240 >gi|331015653|gb|EGH95709.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 308 Score = 189 bits (481), Expect = 5e-46, Method: Composition-based stats. Identities = 43/243 (17%), Positives = 86/243 (35%), Gaps = 8/243 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPS----KIQ 79 L IK+ G + G + F+ + A+G G+ D + AI + K++ Sbjct: 28 GTLKKIKESGTITLGHRDASIPFSYIADASGIPMGYSHDIQLKIVEAIKKELDMPDLKVK 87 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 Y + ++ R +Q+ +D+ +T + R+ + + + G + K Sbjct: 88 YNLVTSQTRIPLVQNGTVDVECGSTTNNVERQQQVDFSIGI--FEVGTRLLSKKDSSYKD 145 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L G ++ AGTT+E + M + I + E + R A+ D + Sbjct: 146 FDDLKGKNVVTTAGTTSERIIKTMNADKQMGMNVISAKDHGESFQMLESGRAVAFMMDDA 205 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQ 258 L +P + + S + +GD + V A + ++ I Sbjct: 206 LLAGEMAKAKKPDDWAVTGTAQSYEIYGCMVRKGDAPFKKAVDDAIVATYKSGDINAIYS 265 Query: 259 KNI 261 K Sbjct: 266 KWF 268 >gi|187929545|ref|YP_001900032.1| family 3 extracellular solute-binding protein [Ralstonia pickettii 12J] gi|309781680|ref|ZP_07676413.1| glutamate/aspartate periplasmic-binding protein [Ralstonia sp. 5_7_47FAA] gi|187726435|gb|ACD27600.1| extracellular solute-binding protein family 3 [Ralstonia pickettii 12J] gi|308919321|gb|EFP64985.1| glutamate/aspartate periplasmic-binding protein [Ralstonia sp. 5_7_47FAA] Length = 307 Score = 189 bits (481), Expect = 5e-46, Method: Composition-based stats. Identities = 40/261 (15%), Positives = 87/261 (33%), Gaps = 10/261 (3%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF--- 72 + + + L IK+ G + G + F+ G+ + + + + Sbjct: 26 STGAQAESNDTLAKIKQSGVISVGYRESSIPFSYQADANTITGYSQEISNMIVAGVEKAV 85 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 +++ P+ ++ R LQ+ ID +T L R+ + + Y G ++ Sbjct: 86 GKKLQVKLTPITSQNRISLLQNGTIDFECGSTTNNLERQKQVAFSNNIFIY--GMLMLVK 143 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM--KYHPIVFERVEEIDAAYRAHR 190 K GI L G ++ AGTT + L K + I+ + + + R Sbjct: 144 KDSGIKDFPDLKGKTVVTTAGTTEDRILQKMNGEAKDADKMNLILAKDHGQAFLTLESGR 203 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 A+ D LY + ++ V+ + A + + D + + ++ Sbjct: 204 AVAFVMDEPLLYGERTKAKNQADWVVTGTPLQTETYACMMRKDDPAFKKVADDVIADLMK 263 Query: 251 AEELGITQKNINQVSKDTTNP 271 + G + P Sbjct: 264 S---GKANDLYKKWFLSPIPP 281 >gi|238753989|ref|ZP_04615348.1| Extracellular solute-binding protein, family 3 [Yersinia ruckeri ATCC 29473] gi|238707741|gb|EEQ00100.1| Extracellular solute-binding protein, family 3 [Yersinia ruckeri ATCC 29473] Length = 278 Score = 189 bits (481), Expect = 5e-46, Method: Composition-based stats. Identities = 59/272 (21%), Positives = 99/272 (36%), Gaps = 16/272 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFD 60 K +++ L L S A L DIK+ G ++ + F + G+D Sbjct: 1 MKHHAIALTLLASLVTLSGQAQADKLDDIKQAGVVRIAVFDSNPPFGYIDEQSKKLVGYD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A++ + K++ N R L SK++D+++ N T R + + Sbjct: 61 VDVANAIAKDLG---VKLELKATNPANRIPLLASKKVDLIAANFTITDERAKQVNFSL-- 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + GQ FI K +++ + I GT E+TL D + I ++ Sbjct: 116 PYFATGQKFIARKG-VLTTPEDIGKLRIGADKGTVQEITLRDRYPTA----KVISYDDTP 170 Query: 181 EIDAAYRAHRCDAYTGDISALYALK--LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 A R A T D + L L + + ++ I P I+K I +G+ Sbjct: 171 LAFTALRNGNVQAITQDDAKLVGLLGNVPAAQKADFEISPFSITKEYQGIGIPKGEDRLT 230 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 V+ T E+ G K N T Sbjct: 231 AAVNQTLE---KLEKDGDAVKIYNHWFGPETK 259 >gi|28871313|ref|NP_793932.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato str. DC3000] gi|28854564|gb|AAO57627.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 308 Score = 189 bits (481), Expect = 5e-46, Method: Composition-based stats. Identities = 43/243 (17%), Positives = 86/243 (35%), Gaps = 8/243 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPS----KIQ 79 L IK+ G + G + F+ + A+G G+ D + AI + K++ Sbjct: 28 GTLKKIKESGTITLGHRDASIPFSYIADASGIPMGYSHDIQLKIVEAIKKELDMPDLKVK 87 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 Y + ++ R +Q+ +D+ +T + R+ + + + G + K Sbjct: 88 YNLVTSQTRIPLVQNGTVDVECGSTTNNVERQQQVDFSIGI--FEVGTRLLSKKDSSYKD 145 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L G ++ AGTT+E + M + I + E + R A+ D + Sbjct: 146 FDDLKGKNVVTTAGTTSERIIKTMNADKQMGMNVISAKDHGESFQMLESGRAVAFMMDDA 205 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQ 258 L +P + + S + +GD + V A + ++ I Sbjct: 206 LLAGEMAKAKKPDDWAVTGTAQSYEIYGCMVRKGDAPFKKAVDDAIVATYKSGDINAIYS 265 Query: 259 KNI 261 K Sbjct: 266 KWF 268 >gi|313890250|ref|ZP_07823884.1| major cell-binding factor [Streptococcus pseudoporcinus SPIN 20026] gi|313121355|gb|EFR44460.1| major cell-binding factor [Streptococcus pseudoporcinus SPIN 20026] Length = 272 Score = 189 bits (480), Expect = 5e-46, Method: Composition-based stats. Identities = 55/264 (20%), Positives = 107/264 (40%), Gaps = 20/264 (7%) Query: 1 MYKDFFVSILCLIILFFTSFST---------NASILGDIKKRGFLKCGINTGLVGFAEVK 51 + K +S+L L + + N+S + IKK G L+ G+ + F Sbjct: 4 LRKWILLSLLAFFCLSQLTLPSVKATENKWVNSSAIKKIKKSGILRIGVKQDVPNFGYYS 63 Query: 52 AN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 N G ++G +VD + ++ ++ P + + A+ R L + Q+DI+ T R Sbjct: 64 PNSGQYEGMEVDIAKKIAKSLKVKPV---FTAVTAQTREALLDNGQLDIIIATYTITPER 120 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 + +F Y D GF+++ + I+S+ L+ A+I V G+TT+ + +Y + + Sbjct: 121 QA--NYSFSKPYYRDEIGFLVNTSQKIASIKDLNHATIGVAQGSTTKAAIEEYARNKKLT 178 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 + + E+ + A R A++ D S L IL D ++ A Sbjct: 179 FKFVQLGSYPELAISLYAKRIKAFSVDKSILTGYVSKQS-----QILSDGFNQQSYGIAS 233 Query: 231 IQGDTEWYNIVSWTHYAMVTAEEL 254 + + N ++ L Sbjct: 234 SKANQNLTNYINELITKWSKDGSL 257 >gi|319795551|ref|YP_004157191.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] gi|315598014|gb|ADU39080.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] Length = 319 Score = 189 bits (480), Expect = 6e-46, Method: Composition-based stats. Identities = 47/273 (17%), Positives = 94/273 (34%), Gaps = 9/273 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + L L + I++ + G+ F+ V A G+ Sbjct: 22 LRATLIPASFALTALAALPVHAAVDTMSKIRETRTIVLGVREAAAPFSFVNAQKQPVGYS 81 Query: 61 VDFCR----ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 VD C + + K+QY P++ +R L S +ID+ +T T+ R+ + Sbjct: 82 VDLCMNAVEEIRRELKLPDIKVQYKPVSGPDRIPKLLSGEIDLECGSTTNTMARQEKVDF 141 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + G + + + +V L + + GTT+E + + Sbjct: 142 --SYTFFVAGMRVLTSQNLHVDTVKDLQKQPVALTKGTTSEKLFRQLAEGELRDAKFTTY 199 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + E A + + A+ D S L L + + +S P A +GDT Sbjct: 200 DNNVEAFKALKEGKVRAFAQDDSLLQGLVSNDKTIDTLSLSRLALSVEPYAVMARKGDTA 259 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 V + + ++ E+ K ++ +T Sbjct: 260 LLAAVDRSLAQLYSSGEIN---KLYDKWFNTST 289 >gi|301801478|emb|CBW34170.1| putative glutamine-binding protein precursor [Streptococcus pneumoniae INV200] Length = 254 Score = 189 bits (480), Expect = 6e-46, Method: Composition-based stats. Identities = 54/256 (21%), Positives = 101/256 (39%), Gaps = 14/256 (5%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRAL 67 ++ L L + + DI+KRG L G+ + F G + G + D + + Sbjct: 1 MISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYSGIETDLAKIV 60 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + KI+Y+P+ A+ R L ++Q+D+ T R+ Y D Sbjct: 61 ADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKLYNF--TSPYYTDAS 115 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 GF+++K I + L+G +I V G+ T+ + + K + + + E+ + Sbjct: 116 GFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLTFKFVELGSYPELITSLH 175 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 AHR DA++ D S L +L D S + +TE + + Sbjct: 176 AHRIDAFSVDRSILSGYTSK-----RTELLDDSFKPSDYGIVTKKSNTELNDYLDTLVTK 230 Query: 248 MVTAEELGITQKNINQ 263 + G QK ++ Sbjct: 231 W---SKDGSLQKLYDR 243 >gi|83746551|ref|ZP_00943602.1| Hypothetical Protein RRSL_03550 [Ralstonia solanacearum UW551] gi|207743861|ref|YP_002260253.1| amino-acid-binding periplasmic protein [Ralstonia solanacearum IPO1609] gi|83726882|gb|EAP74009.1| Hypothetical Protein RRSL_03550 [Ralstonia solanacearum UW551] gi|206595261|emb|CAQ62188.1| amino-acid-binding periplasmic protein [Ralstonia solanacearum IPO1609] Length = 284 Score = 189 bits (480), Expect = 6e-46, Method: Composition-based stats. Identities = 59/251 (23%), Positives = 104/251 (41%), Gaps = 15/251 (5%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKA--NGDWKGFDVDFCRALSSAIFDDPSKIQY 80 A L DIKK+G L CG+ F+ +K + + G+DVD C A++ ++ P Sbjct: 30 KADQLSDIKKKGELVCGVLGTDEPFSFLKDPMSREIVGYDVDMCNAVAKSLGVKPV---L 86 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 L R LQ ++D+L+ + RE + + T+ GQ ++ K GI+++ Sbjct: 87 KQLAVAARIPELQQGRVDLLAASLTHNKERETQIDFSVS--TFITGQKAMVRKDSGITTL 144 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 +QL G + G+T E + K + + F+ + A + + AY D + Sbjct: 145 AQLDGKKVLTVKGSTMEANIGHAIKNAD----IVSFDNSPQALLALQQGKGAAYVNDETT 200 Query: 201 LYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L ++ I+P +S A I + + + V+ M E G QK Sbjct: 201 LIGNMAKLGPASKDYAIVPQNLSTEHFALGIRKNEPAFREQVNKVLLGM---EASGDAQK 257 Query: 260 NINQVSKDTTN 270 ++ TT Sbjct: 258 LFDKWFGPTTK 268 >gi|238797861|ref|ZP_04641353.1| Extracellular solute-binding protein, family 3 [Yersinia mollaretii ATCC 43969] gi|238718277|gb|EEQ10101.1| Extracellular solute-binding protein, family 3 [Yersinia mollaretii ATCC 43969] Length = 284 Score = 189 bits (480), Expect = 6e-46, Method: Composition-based stats. Identities = 58/260 (22%), Positives = 99/260 (38%), Gaps = 16/260 (6%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSK 77 S + +A L DIK+ G ++ + F + G+DVD A++ + K Sbjct: 24 SGAAHADKLDDIKQAGVVRIAVFDSNPPFGYIDPQTKKLVGYDVDVANAIAKDLG---VK 80 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++ N R L SK++D+++ N T R + + + GQ FI HK + Sbjct: 81 VELRATNPANRIPLLTSKKVDLIAANFTITDERAKEVNFSL--PYFATGQKFIAHKG-VL 137 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + + I GT E+TL +++ I ++ A R A T D Sbjct: 138 KTPEDIRKLRIGADKGTVQEITLREHYPTA----KVISYDDTPLAFTALRNGNVQAITQD 193 Query: 198 ISALYALKLTND--RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + L L + ++ I P I+K I +G+ V+ T V E+ G Sbjct: 194 DAKLVGLLGNLPAAQKADFEISPFSITKEYQGVGIPKGEERLTATVNETL---VKLEKDG 250 Query: 256 ITQKNINQVSKDTTNPDVQR 275 K ++ TN R Sbjct: 251 EAAKIYDRWFGPATNAAQPR 270 >gi|325686267|gb|EGD28309.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 286 Score = 189 bits (480), Expect = 6e-46, Method: Composition-based stats. Identities = 65/288 (22%), Positives = 116/288 (40%), Gaps = 30/288 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI----------LGDIKKRGFLKCGINTGLVGFAEV 50 M + ++ FT + N+ + +IK+RG+++ + L + V Sbjct: 11 MGIVALIVVVSAAYFGFTQPNLNSGTAGSRWSNENGVSEIKRRGYIRVAVFGDLPPYGWV 70 Query: 51 KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 G G+DV R ++ + KI+++ +NA R L S + DI+ N T R Sbjct: 71 NDQGKRVGYDVYLARRIAKDL---NVKIRFIQVNANNRVDTLNSNKADIVLANFTVTPER 127 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 + + A G I K I+S +L G + V GTT E +YF A Sbjct: 128 KDVVDFA--KPYMKVSVGVISPKNAPINSAQELKGKKLIVTKGTTAE----NYF-AKQSG 180 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 + + F+ + A + R A D S LYA P V + I + +APA+ Sbjct: 181 VNLLKFDSKTQQFNALKNGRGAALADDNSYLYAWVK--KNPKYVVGIKSIGPRQYVAPAV 238 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ-----VSKDTTNPDV 273 +G+ +++ WT++ + + G ++ + KD D+ Sbjct: 239 KKGN---RSLLKWTNHEITKLTKEGFFAQDYQKELAPYFGKDIKPTDI 283 >gi|171740998|ref|ZP_02916805.1| hypothetical protein BIFDEN_00060 [Bifidobacterium dentium ATCC 27678] gi|171276612|gb|EDT44273.1| hypothetical protein BIFDEN_00060 [Bifidobacterium dentium ATCC 27678] Length = 311 Score = 189 bits (480), Expect = 6e-46, Method: Composition-based stats. Identities = 56/248 (22%), Positives = 102/248 (41%), Gaps = 14/248 (5%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L +IKK G LK + + F V +G++ G+DV F L+ + + Y ++ Sbjct: 65 TLDEIKKSGELKVAVFSDKAPFGYVDKDGNYAGYDVYFAERLAKDLGVKAA---YTSVDP 121 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 R L S ++D+ N T R+ + A G + + I+ VSQL G Sbjct: 122 AARVDVLTSNKVDVTLANFTVTDERKEKVDFA--KPYMKVALGVVSPEGAEITDVSQLKG 179 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 ++ V GTT E YF+ + +++ + A R DA++ D + + A Sbjct: 180 KTLIVAKGTTAET----YFEKNEPDIKLQKYDQYADAYNALLDGRGDAFSTDNTEVLAWA 235 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 +N V + + + +APA+ +G+ E + W + + + K+ + Sbjct: 236 KSNK--GFKVGITKLGDEDTIAPAVQKGNKELLD---WINEEIDKLGDENFFHKDYEETL 290 Query: 266 KDTTNPDV 273 K DV Sbjct: 291 KPVYGSDV 298 >gi|148988975|ref|ZP_01820375.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP6-BS73] gi|168492770|ref|ZP_02716913.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae CDC3059-06] gi|147925472|gb|EDK76549.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP6-BS73] gi|183576870|gb|EDT97398.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae CDC3059-06] Length = 254 Score = 189 bits (480), Expect = 6e-46, Method: Composition-based stats. Identities = 54/256 (21%), Positives = 101/256 (39%), Gaps = 14/256 (5%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRAL 67 ++ L L + + DI+KRG L G+ + F G + G + D + + Sbjct: 1 MISLFGLVAAKPVQANTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYSGIETDLAKMV 60 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + KI+Y+P+ A+ R L ++Q+D+ T R+ Y D Sbjct: 61 ADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKLYNF--TSPYYTDAS 115 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 GF+++K I + L+G +I V G+ T+ + + K + + + E+ + Sbjct: 116 GFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLTFKFVELGSYPELITSLH 175 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 AHR DA++ D S L +L D S + +TE + + Sbjct: 176 AHRIDAFSVDRSILSGYTSK-----RTELLDDSFKPSDYGIVTKKSNTELNDYLDNLVTK 230 Query: 248 MVTAEELGITQKNINQ 263 + G QK ++ Sbjct: 231 W---SKDGSLQKLYDR 243 >gi|56962545|ref|YP_174271.1| glutamine ABC transporter substrate-binding protein [Bacillus clausii KSM-K16] gi|56908783|dbj|BAD63310.1| glutamine ABC transporter substrate-binding protein [Bacillus clausii KSM-K16] Length = 273 Score = 189 bits (480), Expect = 6e-46, Method: Composition-based stats. Identities = 52/251 (20%), Positives = 99/251 (39%), Gaps = 12/251 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDD 74 T S S L I++ G+ F G+ +GFD+D + ++ + D Sbjct: 29 GSTENSNEESTLAKIEEADKFVVGVKFDTRLFGLKDPGTGEVEGFDIDIAKEIAKELLGD 88 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 +KI+ + +K R L + QID + T R+ + + + GQ ++ K Sbjct: 89 ENKIELKEVTSKTRIPLLDNGQIDAIIATMTITEERKKEVNF--SDVYFEAGQSLLVEKG 146 Query: 135 KGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 I + + +G + G T+ L + I E +E A ++ + DA Sbjct: 147 SDIQGIDDIGAGTKVLAVKGATSGQNLLEQAPDA----EVIELENYQEAFLALQSGQGDA 202 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 T D S LY + N S++ ++ + P A+ +GD E+ ++ + + Sbjct: 203 LTTDNSILYGMAEEN---SDYEVVGGTFTDEPYGIAVRKGDDEFTEKINEILADLKASGR 259 Query: 254 LG-ITQKNINQ 263 I +K I + Sbjct: 260 YDEIYEKWIGE 270 >gi|207723710|ref|YP_002254108.1| amino-acid-binding periplasmic protein [Ralstonia solanacearum MolK2] gi|206588914|emb|CAQ35876.1| amino-acid-binding periplasmic protein [Ralstonia solanacearum MolK2] Length = 284 Score = 189 bits (480), Expect = 6e-46, Method: Composition-based stats. Identities = 59/251 (23%), Positives = 104/251 (41%), Gaps = 15/251 (5%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKA--NGDWKGFDVDFCRALSSAIFDDPSKIQY 80 A L DIKK+G L CG+ F+ +K + + G+DVD C A++ ++ P Sbjct: 30 KADQLSDIKKKGELVCGVLGTDEPFSFLKDPMSREIVGYDVDMCNAVAKSLGVKPV---L 86 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 L R LQ ++D+L+ + RE + + T+ GQ ++ K GI+++ Sbjct: 87 KQLAVAARIPELQQGRVDLLAASLTHNKERETQIDFSVS--TFITGQKAMVRKDSGITTL 144 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 +QL G + G+T E + K + + F+ + A + + AY D + Sbjct: 145 AQLDGKKVLTVKGSTMEANIGHAIKNAD----IVSFDNSPQALLALQQGKGAAYVNDETT 200 Query: 201 LYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L ++ I+P +S A I + + + V+ M E G QK Sbjct: 201 LIGNMAKLGPASKDYAIVPQNLSTEHFALGIRKNEPAFREQVNKVLLGM---EASGDAQK 257 Query: 260 NINQVSKDTTN 270 ++ TT Sbjct: 258 LFDKWFGPTTK 268 >gi|17231622|ref|NP_488170.1| binding protein of ABC transporter component [Nostoc sp. PCC 7120] gi|17133265|dbj|BAB75829.1| binding protein of ABC transporter component [Nostoc sp. PCC 7120] Length = 301 Score = 189 bits (480), Expect = 6e-46, Method: Composition-based stats. Identities = 47/256 (18%), Positives = 102/256 (39%), Gaps = 11/256 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 MYK+ +++ L + + A + + + G L G + + FA A G G+ Sbjct: 1 MYKNLAIALFSLTLTTVIPGAALAETVMQKVSRTGVLTAGTSKDAMPFAYTNAQGQLTGY 60 Query: 60 DVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 VD + + +++ +PL +R + ++Q+DI+ + +T R+ + Sbjct: 61 SVDMLSEIKRHLEKELGKKIQLKLVPLTPAQRIPKIVNRQVDIVCDASSFTWERDKKVDF 120 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + G ++ + S L G I V A TT E + + Y Sbjct: 121 SVSYGA--TGTQLLVKSGSNLGSPESLIGKRIGVLAQTTNEQAIKRVQPQAKLVY----L 174 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDT 235 + E A + + DA++ D L + P + I+PD S+ +A + + ++ Sbjct: 175 KSRSEGYTALQEGKIDAFSSDSILLEGWLQRVENPDDFAIVPDRPYSREGIACMVPEDNS 234 Query: 236 EWYNIVSWTHYAMVTA 251 ++ + V+++ + Sbjct: 235 KFLDAVNYSLVKFMQG 250 >gi|238793125|ref|ZP_04636753.1| Extracellular solute-binding protein, family 3 [Yersinia intermedia ATCC 29909] gi|238727498|gb|EEQ19024.1| Extracellular solute-binding protein, family 3 [Yersinia intermedia ATCC 29909] Length = 284 Score = 189 bits (480), Expect = 7e-46, Method: Composition-based stats. Identities = 58/260 (22%), Positives = 99/260 (38%), Gaps = 16/260 (6%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSK 77 S + +A L DIK+ G ++ + F + G+DVD A++ + K Sbjct: 24 SGAAHADKLDDIKQAGVVRIAVFDSNPPFGYIDPQTKKLVGYDVDVANAIAKDLG---VK 80 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++ N R L SK++D+++ N T R + + + GQ FI HK + Sbjct: 81 VELRATNPANRIPLLTSKKVDLIAANFTITDERAKEVNFSL--PYFATGQKFIAHKG-VL 137 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + + I GT E+TL +++ I ++ A R A T D Sbjct: 138 KTPEDIGKLRIGADKGTVQEITLREHYPTA----KVISYDDTPLAFTALRNGNVQAITQD 193 Query: 198 ISALYALKLTND--RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + L L + ++ I P I+K I +G+ V+ T V E+ G Sbjct: 194 DAKLVGLLGNLPAAQKADFEISPFSITKEYQGVGIPKGEERLTASVNETL---VKLEKDG 250 Query: 256 ITQKNINQVSKDTTNPDVQR 275 K ++ TN R Sbjct: 251 EAAKIYDRWFGPATNAAQPR 270 >gi|167824254|ref|ZP_02455725.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 9] gi|226196401|ref|ZP_03791983.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei Pakistan 9] gi|225931618|gb|EEH27623.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei Pakistan 9] Length = 271 Score = 189 bits (480), Expect = 7e-46, Method: Composition-based stats. Identities = 62/280 (22%), Positives = 99/280 (35%), Gaps = 14/280 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59 M F + L + L + +A L DI+K G L+ F V G Sbjct: 1 MKFKPFATWLLGLSLVAAHAAAHADRLDDIRKAGVLRVATFDSNPPFGFVDPRTNRIVGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD+ +AL+ + K++ P N R L S ++D++ N T R + + Sbjct: 61 DVDYAQALADRLG---VKLKLQPTNPANRIPFLTSGKVDLVLANFTITDERAKQVDFS-- 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + YF + KK + S QL+ I GTT E+TL + + + ++ Sbjct: 116 -VPYFASGQQFLAKKGALKSADQLNRLRIGADKGTTNEVTLREKYPQA----TIVAYDDT 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AA RA A T D L L + + IS + +G+ Sbjct: 171 PFAFAALRAGNVQAITQDGPKLIGLLANVPDKQNYEVPAFSISNDYMGVGAPKGEPRLVA 230 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGI 279 V+ T E G + + T + R I Sbjct: 231 FVNETLT---DLEASGRAGRIYDAWFGPNTKTPLARIFKI 267 >gi|283455613|ref|YP_003360177.1| glutamine-binding protein glnH [Bifidobacterium dentium Bd1] gi|283102247|gb|ADB09353.1| glnH Glutamine-binding protein glnH [Bifidobacterium dentium Bd1] Length = 276 Score = 188 bits (479), Expect = 7e-46, Method: Composition-based stats. Identities = 56/248 (22%), Positives = 102/248 (41%), Gaps = 14/248 (5%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L +IKK G LK + + F V +G++ G+DV F L+ + + Y ++ Sbjct: 30 TLDEIKKSGELKVAVFSDKAPFGYVDKDGNYAGYDVYFAERLAKDLGVKAA---YTSVDP 86 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 R L S ++D+ N T R+ + A G + + I+ VSQL G Sbjct: 87 AARVDVLTSNKVDVTLANFTVTDERKEKVDFA--KPYMKVALGVVSPEGAEITDVSQLKG 144 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 ++ V GTT E YF+ + +++ + A R DA++ D + + A Sbjct: 145 KTLIVAKGTTAET----YFEKNEPDIKLQKYDQYADAYNALLDGRGDAFSTDNTEVLAWA 200 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 +N V + + + +APA+ +G+ E + W + + + K+ + Sbjct: 201 KSNK--GFKVGITKLGDEDTIAPAVQKGNKELLD---WINEEIDKLGDENFFHKDYEETL 255 Query: 266 KDTTNPDV 273 K DV Sbjct: 256 KPVYGSDV 263 >gi|168492861|ref|ZP_02717004.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus pneumoniae CDC3059-06] gi|183576884|gb|EDT97412.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus pneumoniae CDC3059-06] Length = 286 Score = 188 bits (479), Expect = 7e-46, Method: Composition-based stats. Identities = 56/287 (19%), Positives = 111/287 (38%), Gaps = 26/287 (9%) Query: 1 MYKDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTGLVG 46 ++K + L F + + A + + KK G L+ + Sbjct: 3 LFKPLLTVLALAFALIFITACSSGGNAGPSSGKTTAKARTIDENKKSGELRIAVFGDKKP 62 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F V +G ++G+D++ L+ + K++Y+ ++A R L S ++DI N Sbjct: 63 FGYVDNDGSYQGYDIELGNQLAQDLG---VKVKYISVDAANRAEYLISNKVDITLANFTV 119 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T R+ + A G + K I+ V QL G ++ V GTT E YF+ Sbjct: 120 TDERKKQVDFAL--PYMKVSLGVVSPKTGLITDVKQLEGKTLIVTKGTTAET----YFEK 173 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 ++ + +++ + A R DA++ D + + A L N V + + + Sbjct: 174 NHPEIKLQKYDQYSDSYQALLDGRGDAFSTDNTEVLAWALENK--GFEVGITSLGDPDTI 231 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSKDTTNPD 272 A A+ +G+ E + ++ + +K ++ D D Sbjct: 232 AAAVQKGNQELLDFINKDIEKLGKENFFHKAYEKTLHPTYGDAAKAD 278 >gi|86360898|ref|YP_472785.1| amino acid ABC transporter substrate-binding protein [Rhizobium etli CFN 42] gi|86285000|gb|ABC94058.1| probable amino acid ABC transporter, substrate-binding protein [Rhizobium etli CFN 42] Length = 279 Score = 188 bits (479), Expect = 7e-46, Method: Composition-based stats. Identities = 58/257 (22%), Positives = 100/257 (38%), Gaps = 5/257 (1%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 T + S L ++ RG L G + + A+ +GFDVD ++ A+F DP K Sbjct: 20 TPALADGSKLDEVLARGHLVLGTGSTNAPWHFKSADDKLQGFDVDMGHIVAKALFGDPDK 79 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 I+Y+ ++ R + + ++DI + T R + +AF Y +G G ++ Sbjct: 80 IEYVNQSSDARIPNITTDKVDITCQFMTVTGER--AQQVAFTIPYYREGVGLMLKGDGKY 137 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + + L A V + A + +E V+ I A + R DA D Sbjct: 138 ADYAALKAAGSSVTISVLQNVYAESMVHAALPEATVDQYESVDLIYQALESGRADAAATD 197 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 S+L P + + A A+ +GD +W N V+ + +T E Sbjct: 198 QSSLAWYMTQ--NPGRYKDAGYGWNPQTYACAVKRGDQDWLNFVNTALHEAMTGVEFDFY 255 Query: 258 QKNIN-QVSKDTTNPDV 273 K+ KD P + Sbjct: 256 AKSFKTWFGKDLAPPQI 272 >gi|300362122|ref|ZP_07058299.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus gasseri JV-V03] gi|300354741|gb|EFJ70612.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus gasseri JV-V03] Length = 277 Score = 188 bits (479), Expect = 7e-46, Method: Composition-based stats. Identities = 45/281 (16%), Positives = 104/281 (37%), Gaps = 19/281 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA------SILGDIKKRGFLKCGINTGLVGFAEVK-AN 53 M K + IL L++ + + A ++ +K + G+ F + Sbjct: 4 MKKSIKIFILPLVLGLLITLTGCAKKQKSSNVYEQVKASKTITWGVKADTRLFGLMSIKT 63 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G +GF+VD +AL+ + +K +++ K R L++ ID + T R+ Sbjct: 64 GKIEGFEVDLAKALTKQMLGKNAKAEFVQTTPKTRIPLLKNGNIDAILATMTITPDRKKQ 123 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + + + GQ ++ I +V L+G + GTT + + Sbjct: 124 VTFSE--PYFTAGQSLLVKDNSTIKNVKDLNGKTALAVKGTTAVDNVKKFAPKA----KV 177 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + ++ + A +A + A T D L + N + ++ + P A+ +G Sbjct: 178 LEYDDYGQAFTALKAGQGQAMTTDNGLLAGIASENKG---YKLVGGTYTSEPYGIAVEKG 234 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 T + + ++ ++ G + + + +++ Sbjct: 235 QTGFADRINKALN---ELKKNGTYHRLLVKWFNGIPGFNIK 272 >gi|26987807|ref|NP_743232.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas putida KT2440] gi|24982504|gb|AAN66696.1|AE016297_10 amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas putida KT2440] Length = 306 Score = 188 bits (479), Expect = 7e-46, Method: Composition-based stats. Identities = 47/253 (18%), Positives = 91/253 (35%), Gaps = 11/253 (4%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPSKIQYL 81 L IK+ G + G + F+ + + G+ D A+ A+ K++Y Sbjct: 29 GTLKKIKESGTITLGHRDSSIPFSYLAGKPEPVGYSHDIQLAVVDALKKQLGTDIKVRYN 88 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG---IS 138 + ++ R +Q+ +D+ +T + R+ +G + + G + K G Sbjct: 89 LVTSQTRIPLVQNGTVDLECGSTTNNVERQQQVGFSVGI--FEVGTRLLTKVKDGQPAYK 146 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 L+G ++ AGTT+E L MK + I + E + R A+ D Sbjct: 147 DFPDLAGKNVVTTAGTTSERILKAMNADKQMKMNVISAKDHGEAFNMLESGRAVAFMMDD 206 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 + L +P++ VI S + + D + V A + E+ Sbjct: 207 ALLAGEMAKARKPADWVITGTPQSYEIYGCMVRKDDAAFKKAVDDAIVAYFKSGEVN--- 263 Query: 259 KNINQVSKDTTNP 271 K+ + P Sbjct: 264 KSYEKWFMQPIPP 276 >gi|322435380|ref|YP_004217592.1| hypothetical protein AciX9_1764 [Acidobacterium sp. MP5ACTX9] gi|321163107|gb|ADW68812.1| hypothetical protein AciX9_1764 [Acidobacterium sp. MP5ACTX9] Length = 311 Score = 188 bits (479), Expect = 8e-46, Method: Composition-based stats. Identities = 85/306 (27%), Positives = 142/306 (46%), Gaps = 15/306 (4%) Query: 11 CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70 LIIL S A + I+ L+C I+ + +G FD++ C A++ A Sbjct: 5 LLIILATLSLPACAQSIETIRTTKLLRCAIDQEPPEYTTEDLHGPRVAFDLELCHAVALA 64 Query: 71 IFDDPSKIQYLPLN-AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 I D K+Q + ++ E L+++ D+ + L + GL DG GF Sbjct: 65 IGPD-IKVQPILVSDEAEAISVLKARHADL-APTLSLNLTNATTPGLWLGLPIVLDGTGF 122 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 ++ V LSG IC A T TE L +F +++ + P F E+DAAY Sbjct: 123 MVPTATL--DVKSLSGKKICFFAETETETILKTWFTQNHLDFLPYPFSEEGEMDAAYTTG 180 Query: 190 RCDAYTGDISALYALKLT-NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 C A GD++ L + + + + +LP +I+ +PLAPA D + +WT+ + Sbjct: 181 NCAAMAGDLTRLASTRQNYGRAAARYKLLPTLIASAPLAPA--STDPTLTQLATWTNQLL 238 Query: 249 VTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGE 308 + AE L IT + + + +P +QR LG ++ +G L L W R++ +GNY + Sbjct: 239 LNAEALNITH-----IPEHSQDPAIQRLLG--QTHELGPRLHLDDAWPIRVLTTLGNYAD 291 Query: 309 MFDRNL 314 ++ R L Sbjct: 292 LYARTL 297 >gi|118475479|ref|YP_892322.1| bifunctional adhesin/ABC transporter aspartate/glutamate-binding protein [Campylobacter fetus subsp. fetus 82-40] gi|118414705|gb|ABK83125.1| glutamine-binding protein [Campylobacter fetus subsp. fetus 82-40] Length = 264 Score = 188 bits (479), Expect = 8e-46, Method: Composition-based stats. Identities = 58/251 (23%), Positives = 104/251 (41%), Gaps = 16/251 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI--------LGDIKKRGFLKCGINTGLVGFAEVKA 52 M K ++ L F + S+N S L +IK +G G+ + GF + Sbjct: 1 MNKFVKGLLILGTGLVFAACSSNTSSDSKEANSNLENIKSKGIFTAGVKDDVPGFGLLNK 60 Query: 53 -NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G +GF++D + LS I D +K++ + + AK R L + +D + T R+ Sbjct: 61 QTGKIEGFEIDIAKLLSKHILGDENKVKLVSVTAKTRGPMLDNSTLDAVIATFTITDERK 120 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 + + Y D G ++ K G++++ L G +I V +T++ ++ + K ++ Sbjct: 121 KT--YDYTTPYYKDAVGLLVRKDGGVNTLKDLEGGTIGVSMSSTSKKSILEAAKNLGIEL 178 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + I AA A R DA++ D S L VIL + + A Sbjct: 179 KFNEYPDYPSIKAALDAKRIDAFSVDKSILLGYI-----DDNSVILDESFAPQEYGIATR 233 Query: 232 QGDTEWYNIVS 242 + D E+ V Sbjct: 234 KNDPEFSKYVD 244 >gi|293572581|ref|ZP_06683555.1| glutamine-binding protein [Enterococcus faecium E980] gi|291607364|gb|EFF36712.1| glutamine-binding protein [Enterococcus faecium E980] Length = 271 Score = 188 bits (479), Expect = 8e-46, Method: Composition-based stats. Identities = 53/267 (19%), Positives = 100/267 (37%), Gaps = 16/267 (5%) Query: 2 YKDFFVSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDW 56 K + +L + L N IL K + G+ F + + Sbjct: 5 KKIRLIFLLGIAFLALAGCKGNGLANEDILERSKSTNEISWGVKYDTRLFGMMDIESRTV 64 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +GFDVD +A++ I + K +++ + +K R L++ ID + T R+ + Sbjct: 65 QGFDVDIAKAITEKILGENGKAEFVEVTSKTRIPLLKNGNIDAIIATMTITDERKKQVDF 124 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTELTLADYFKAHNMKYHPIV 175 + + GQ ++ K I SV L+ + ++ G+T+ + + N + Sbjct: 125 --SDVYFDAGQALLVKKGSQIKSVDDLNASTTVLAVKGSTSAANIRQHAPDAN----ILE 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 E E A ++ + DA T D + L + N E+ ++ + P AI +G Sbjct: 179 LENYAEAFTALQSGQGDAMTTDNAILLGIADENP---EYELVGGTFTNEPYGIAINKGQE 235 Query: 236 EWYNIVSWTHYAMVTAEEL-GITQKNI 261 + V+ M I QK Sbjct: 236 NFLKAVNQALEEMHADGTYDKIYQKWF 262 >gi|325125055|gb|ADY84385.1| Glutamine ABC transporter substrate-binding protein [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 286 Score = 188 bits (479), Expect = 8e-46, Method: Composition-based stats. Identities = 65/288 (22%), Positives = 116/288 (40%), Gaps = 30/288 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI----------LGDIKKRGFLKCGINTGLVGFAEV 50 M + ++ FT + N+ + +IK+RG+++ + L + V Sbjct: 11 MGIVALIVVVSAAYFGFTQSNLNSGTAGSRWSNENGVSEIKRRGYIRVAVFGDLPPYGWV 70 Query: 51 KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 G G+DV R ++ + KI+++ +NA R L S + DI+ N T R Sbjct: 71 NEQGKRVGYDVYLARRIAKDL---NVKIRFIQVNANNRVDTLNSNKADIVLANFTVTPER 127 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 + + A G I K I+S +L G + V GTT E +YF A Sbjct: 128 KDVVDFA--KPYMKVSVGVISPKNAPINSAQELKGKKLIVTKGTTAE----NYF-AKQSG 180 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 + + F+ + A + R A D S LYA P V + I + +APA+ Sbjct: 181 VNLLKFDSKTQQFNALKNGRGAALADDNSYLYAWVK--KNPKYVVGIKSIGPRQYVAPAV 238 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ-----VSKDTTNPDV 273 +G+ +++ WT++ + + G ++ + KD D+ Sbjct: 239 KKGN---RSLLKWTNHEITKLTKEGFFVQDYQKELAPYFGKDIKPTDI 283 >gi|170748673|ref|YP_001754933.1| extracellular solute-binding protein [Methylobacterium radiotolerans JCM 2831] gi|170655195|gb|ACB24250.1| extracellular solute-binding protein family 3 [Methylobacterium radiotolerans JCM 2831] Length = 307 Score = 188 bits (479), Expect = 8e-46, Method: Composition-based stats. Identities = 42/252 (16%), Positives = 93/252 (36%), Gaps = 10/252 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS----KIQY 80 L +K + G V F+ + A+ G+ +D C ++ A+ + +++ Sbjct: 32 GTLKKVKDANAIVIGYRDASVPFSYLGADQKPIGYAMDICYKIADAVKAKLNLPNLEVKL 91 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 P+ + R + + ID+ +T RE + + ++ K + ++ Sbjct: 92 NPVTSATRIPLMANGTIDLECGSTTNNAEREKQVWFTNS--HFLTATRYVSKKSANLHTI 149 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L G ++ +GTT + + + + + E R A+ D Sbjct: 150 EDLKGKTVVSTSGTTNIKQINEANTERKLGLTILPAKDHAEAFLMVETGRAAAFVMDDVL 209 Query: 201 LYALKLTNDRPSEHVILPDIISK-SPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L +L ++ PS + I + +SK P + + DTE+ + + T+ E + Sbjct: 210 LASLAASSKDPSAYEISTEALSKPEPYGIMLRKDDTEFKKVADDATAKLYTSPE---GKA 266 Query: 260 NINQVSKDTTNP 271 ++ T P Sbjct: 267 LYDKWFTKTIPP 278 >gi|239813330|ref|YP_002942240.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] gi|239799907|gb|ACS16974.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] Length = 301 Score = 188 bits (479), Expect = 8e-46, Method: Composition-based stats. Identities = 53/247 (21%), Positives = 94/247 (38%), Gaps = 7/247 (2%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAE-VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 L I+ G G+ A + AN + G+ V+ C + I +K++Y+ + Sbjct: 31 TLDKIRSSGKAVLGVREASPPMAYMLGANEKYVGYHVELCERVLKDI-APQAKLEYMAVT 89 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 A+ +Q+ +DI T R+ + A TY GISS+ QL+ Sbjct: 90 AQNTIPLVQNGTLDIGCGPTTNNTARQQQVAFAL--TTYVSEVRMATRVDSGISSLDQLA 147 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G ++ GTT L +A N ++ + E + R DA+ D + L + Sbjct: 148 GRTVSASTGTTAVQLLRKRERAQNTTITTMLGKDHLESFLLMESGRADAFVLDDNLLAGI 207 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 PS + I+ D + P+A + D + V ++ + EL +K + Sbjct: 208 IANAKNPSAYRIVGDALGSEPIALLFRKDDAIFKAAVDDALRRLMKSGEL---EKIYTKW 264 Query: 265 SKDTTNP 271 P Sbjct: 265 FVAPIPP 271 >gi|153952077|ref|YP_001398009.1| bifunctional adhesin/ABC transporter aspartate/glutamate-binding protein [Campylobacter jejuni subsp. doylei 269.97] gi|152939523|gb|ABS44264.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Campylobacter jejuni subsp. doylei 269.97] Length = 259 Score = 188 bits (479), Expect = 8e-46, Method: Composition-based stats. Identities = 59/244 (24%), Positives = 101/244 (41%), Gaps = 10/244 (4%) Query: 2 YKDFF-VSILCL-IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKG 58 K +++ L + F++ + L IK +G L G+ + +A + A G+ KG Sbjct: 4 RKSLLKLAVFALGACVAFSNANAAEGKLESIKSKGQLIVGVKNDVPHYALLDQATGEIKG 63 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 F+VD + L+ +I D KI+ + +NAK R L + +D + T R+ + Sbjct: 64 FEVDVAKLLAKSILGDDKKIKLVAVNAKTRGPLLDNGSVDAVIATFTITPERKRIYNFSE 123 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y D G ++ K+K S++ + GA+I V TT+ + + K + F Sbjct: 124 --PYYQDAIGLLVLKEKNYKSLADMKGANIGVAQAATTKKAIGEAAKKIGIDVKFSEFPD 181 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 I AA A R +A++ D S L + ILPD + D + Sbjct: 182 YPSIKAALDAKRVNAFSVDKSILLGYV-----DDKSEILPDSFEPQSYGIVTKKDDPAFA 236 Query: 239 NIVS 242 V Sbjct: 237 KYVD 240 >gi|167586688|ref|ZP_02379076.1| extracellular solute-binding protein, family 3 [Burkholderia ubonensis Bu] Length = 302 Score = 188 bits (479), Expect = 8e-46, Method: Composition-based stats. Identities = 44/252 (17%), Positives = 91/252 (36%), Gaps = 9/252 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI----FDDPSKIQ 79 A L I++ + G V F+ V A+G GF D C + +A+ +++ Sbjct: 30 AGTLAKIQQSNVIAIGHRETSVPFSYVDASGKVIGFSQDLCDRVIAAVRARTGKPDLQVR 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 ++P+ ++ R +Q+ +D+ T R + + + GI Sbjct: 90 FIPVTSQNRMPLVQNGTVDLECGVTTNLAARHAQVAF--STTFFVATTRLLTRTTSGIRD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L+G ++ GTT+E L + M I + E + R AY D Sbjct: 148 FPDLAGKTVVTNQGTTSERLLRRMNEEKKMNMQIISAKDYGEGRLTLESGRAVAYMMDDV 207 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L ++ +P++ I+ S + + D ++ +V ++ + E+ Sbjct: 208 LLAGVRQLAAKPADWTIVGTPQSSEAYGFMLRKDDPQFKALVDGVLAQVMKSGEIN---A 264 Query: 260 NINQVSKDTTNP 271 ++ P Sbjct: 265 LYDKWFMKPVPP 276 >gi|170691878|ref|ZP_02883042.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] gi|170143162|gb|EDT11326.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] Length = 306 Score = 188 bits (479), Expect = 9e-46, Method: Composition-based stats. Identities = 49/285 (17%), Positives = 98/285 (34%), Gaps = 19/285 (6%) Query: 1 MYKDFFVSILCLIILFFTSF----------STNASILGDIKKRGFLKCGINTGLVGFAEV 50 M +++F + + + +S L + + + G V F+ Sbjct: 1 MKREYFARAIVTVAIATSSALQLHGVKAAEPALTGTLLKVSEDKVITIGYRDASVPFSYY 60 Query: 51 KANGDWKGFDVDFCR----ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 AN G+ +D + + K++ +P+ ++ R LQ+ ID +T Sbjct: 61 DANQKPIGYSIDVANLVIERIRKDLKLPDLKVRTIPITSQNRLSLLQNGTIDFECTSTTN 120 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 R + + + G +++ K GI L ++ V AGTT+E +L Sbjct: 121 NAERARQVSFSNS--FFIIGTRLLVNTKSGIKDFDDLKDKTVVVGAGTTSEKSLRKMNVE 178 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 +M I + E R A D + L + P+++ I+ S Sbjct: 179 KSMNMDIISAKDHAESFLMLTTGRAKAMMMDDALLAGERAKTRNPNDYEIVGTPQSYEAY 238 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + + D I A+ A++ G+ K + + P Sbjct: 239 GCMLRKNDAPMKAI---MDAAIADAQKSGLAAKMYTRWFEQPIPP 280 >gi|187926114|ref|YP_001892459.1| extracellular solute-binding protein family 3 [Ralstonia pickettii 12J] gi|241665602|ref|YP_002983961.1| extracellular solute-binding protein family 3 [Ralstonia pickettii 12D] gi|187727868|gb|ACD29032.1| extracellular solute-binding protein family 3 [Ralstonia pickettii 12J] gi|240867629|gb|ACS65289.1| extracellular solute-binding protein family 3 [Ralstonia pickettii 12D] Length = 295 Score = 188 bits (479), Expect = 9e-46, Method: Composition-based stats. Identities = 58/257 (22%), Positives = 99/257 (38%), Gaps = 16/257 (6%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQY 80 +A L DIKK G L+ G+ F A G G DVD+ + +++ + K++ Sbjct: 44 AHADKLDDIKKAGVLRVGVFDANPPFGYADAKTGQPVGLDVDYAQEIANKLG---VKLEL 100 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 N R L S ++DI++ N T R+ + + G FI K + Sbjct: 101 RATNPANRVPLLTSGKVDIVAANFTITDERKKQIEF--STPYFASGLQFIARKG-VLKQP 157 Query: 141 SQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 L G + V GTT E TL D + I ++ A R A+ D Sbjct: 158 DDLKRDGIRLGVDKGTTQETTLRDGYPKA----RVIAYDDSPLALTALRTGAIQAFAQDG 213 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 + L AL T SE I P ++++ + + +G+T+ + E+ G Sbjct: 214 AKLGALLATLPNRSELEISPFVLTREYMGIGVPKGETKLTATIDQILQG---LEKDGTAG 270 Query: 259 KNINQVSKDTTNPDVQR 275 + ++ + + R Sbjct: 271 RIYDRWFGPKSAAPLPR 287 >gi|312958337|ref|ZP_07772858.1| extracellular solute-binding protein [Pseudomonas fluorescens WH6] gi|311287401|gb|EFQ65961.1| extracellular solute-binding protein [Pseudomonas fluorescens WH6] Length = 282 Score = 188 bits (479), Expect = 9e-46, Method: Composition-based stats. Identities = 58/257 (22%), Positives = 106/257 (41%), Gaps = 17/257 (6%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 S + IK R L G+ T F V G + GFD D R + + D +K+++ Sbjct: 27 PAAVSYIDKIKARDKLIVGVFTDKPPFGFVNEAGRYVGFDTDIGRQFAKDLLGDENKVEF 86 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + + R LQS ++D++ N T R+ ++ ++ + S+ Sbjct: 87 VAVEPASRIPFLQSDKVDLILANMTVTPERKEAVDF--TNPNLKVAVQALVPNNSAVKSL 144 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + L+ + V GTT ++ L ++ + + FE+ E A A R DAY D Sbjct: 145 NDLATRTTIVTTGTTADIWLT----KNHPDWKLLKFEKNSESLQALSAGRGDAYAQDNLV 200 Query: 201 LYALKLTNDRPSEHVILPDIISKS-PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L++ N + +L + + P+APA+ +G+ E + W + + E K Sbjct: 201 LFSWAKQNPG---YRVLEEKLGDEAPIAPAVKKGNIELRD---WVNAELAKLGEEKFLLK 254 Query: 260 NINQVSK----DTTNPD 272 +Q + D T P+ Sbjct: 255 LYDQYVRKELSDETKPE 271 >gi|53719422|ref|YP_108408.1| putative amino acid transport system, exported protein [Burkholderia pseudomallei K96243] gi|76810718|ref|YP_333446.1| extracellular solute-binding protein [Burkholderia pseudomallei 1710b] gi|121599839|ref|YP_992996.1| extracellular solute-binding protein [Burkholderia mallei SAVP1] gi|124384138|ref|YP_001026328.1| polar amino acid ABC uptake transporter substrate binding protein [Burkholderia mallei NCTC 10229] gi|126441076|ref|YP_001058918.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 668] gi|126448524|ref|YP_001080398.1| extracellular solute-binding protein [Burkholderia mallei NCTC 10247] gi|126454167|ref|YP_001066160.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 1106a] gi|134282189|ref|ZP_01768894.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 305] gi|167719672|ref|ZP_02402908.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei DM98] gi|167738660|ref|ZP_02411434.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 14] gi|167815884|ref|ZP_02447564.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 91] gi|167845801|ref|ZP_02471309.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei B7210] gi|167894372|ref|ZP_02481774.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 7894] gi|167902774|ref|ZP_02489979.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei NCTC 13177] gi|167911019|ref|ZP_02498110.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 112] gi|167919034|ref|ZP_02506125.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei BCC215] gi|217421274|ref|ZP_03452778.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 576] gi|237812174|ref|YP_002896625.1| polar amino acid ABC uptake transporter substrate binding protein [Burkholderia pseudomallei MSHR346] gi|242315405|ref|ZP_04814421.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 1106b] gi|254178648|ref|ZP_04885303.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia mallei ATCC 10399] gi|254179866|ref|ZP_04886465.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 1655] gi|254188730|ref|ZP_04895241.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei Pasteur 52237] gi|254197737|ref|ZP_04904159.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei S13] gi|254258483|ref|ZP_04949537.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 1710a] gi|254297706|ref|ZP_04965159.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 406e] gi|254358534|ref|ZP_04974807.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia mallei 2002721280] gi|52209836|emb|CAH35808.1| putative amino acid transport system, exported protein [Burkholderia pseudomallei K96243] gi|76580171|gb|ABA49646.1| extracellular solute-binding protein [Burkholderia pseudomallei 1710b] gi|121228649|gb|ABM51167.1| extracellular solute-binding protein [Burkholderia mallei SAVP1] gi|124292158|gb|ABN01427.1| polar amino acid ABC uptake transporter substrate binding protein [Burkholderia mallei NCTC 10229] gi|126220569|gb|ABN84075.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 668] gi|126227809|gb|ABN91349.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 1106a] gi|126241394|gb|ABO04487.1| extracellular solute-binding protein [Burkholderia mallei NCTC 10247] gi|134246227|gb|EBA46316.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 305] gi|148027661|gb|EDK85682.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia mallei 2002721280] gi|157807287|gb|EDO84457.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 406e] gi|157936409|gb|EDO92079.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei Pasteur 52237] gi|160699687|gb|EDP89657.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia mallei ATCC 10399] gi|169654478|gb|EDS87171.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei S13] gi|184210406|gb|EDU07449.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 1655] gi|217395016|gb|EEC35034.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 576] gi|237505304|gb|ACQ97622.1| polar amino acid ABC uptake transporter substrate binding protein [Burkholderia pseudomallei MSHR346] gi|242138644|gb|EES25046.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 1106b] gi|254217172|gb|EET06556.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 1710a] Length = 271 Score = 188 bits (478), Expect = 9e-46, Method: Composition-based stats. Identities = 62/280 (22%), Positives = 99/280 (35%), Gaps = 14/280 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59 M F + L + L + +A L DI+K G L+ F V G Sbjct: 1 MKFKPFATWLLGLSLVAAHAAAHADRLDDIRKAGVLRVATFDSNPPFGFVDPRTNRIVGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD+ +AL+ + K++ P N R L S ++D++ N T R + + Sbjct: 61 DVDYAQALADRLG---VKLKLQPTNPANRIPFLTSGKVDLVLANFTITDERAKQVDFS-- 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + YF + KK + S QL+ I GTT E+TL + + + ++ Sbjct: 116 -VPYFASGQQFLAKKGVLKSADQLNRLRIGADKGTTNEVTLREKYPQA----TIVAYDDT 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AA RA A T D L L + + IS + +G+ Sbjct: 171 PFAFAALRAGNVQAITQDGPKLIGLLANVPDKQNYEVPAFSISNDYMGVGAPKGEPRLVA 230 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGI 279 V+ T E G + + T + R I Sbjct: 231 FVNETLT---DLEASGRAGRIYDAWFGPNTKTPLARIFKI 267 >gi|258545105|ref|ZP_05705339.1| ABC superfamily ATP binding cassette transporter, binding protein [Cardiobacterium hominis ATCC 15826] gi|258519624|gb|EEV88483.1| ABC superfamily ATP binding cassette transporter, binding protein [Cardiobacterium hominis ATCC 15826] Length = 268 Score = 188 bits (478), Expect = 9e-46, Method: Composition-based stats. Identities = 56/241 (23%), Positives = 102/241 (42%), Gaps = 9/241 (3%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 ++K +G ++ G+ + F V ANG +GFDV+ R L+ + D +K +++ + A Sbjct: 24 DELKAKGEVRIGVFSDKPPFGYVDANGVSQGFDVEIGRYLTKQLLGDEAKAKFVLVEAAN 83 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 R L+S ++DI+ N T R + + + G + K I S+ +L + Sbjct: 84 RVEYLRSNKVDIILANFTVTPER--AKVVDYAKPYMKVALGVVSPDKAPIKSIDELKDKT 141 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 + + GTT + YF + + +++ E A R DA D + L A Sbjct: 142 LLLNKGTTADR----YFSKEHRDIKSLKYDQNTETFNALLDGRGDALAHDNTLLLAWAK- 196 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSK 266 + P V + I +APA+ +GD + + AM + +K + V Sbjct: 197 -EHPGYSVGITRIGEDDFIAPAVAKGDDALHAWLDEQIDAMNQNGAMQAAYEKTLKPVFG 255 Query: 267 D 267 D Sbjct: 256 D 256 >gi|186473393|ref|YP_001860735.1| extracellular solute-binding protein [Burkholderia phymatum STM815] gi|184195725|gb|ACC73689.1| extracellular solute-binding protein family 3 [Burkholderia phymatum STM815] Length = 296 Score = 188 bits (478), Expect = 9e-46, Method: Composition-based stats. Identities = 45/277 (16%), Positives = 95/277 (34%), Gaps = 14/277 (5%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS----SAIFD 73 T ++ A L I + + + F+ + GF VD A+ A+ Sbjct: 18 TMTASQAQTLDKIARTNQIVVSYRESAIPFSYLLTPHKAVGFSVDVTEAIVDDVRKALGR 77 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 Y+P+ + R L ID+ +T T R + + ++ G + + Sbjct: 78 PDLHTVYVPVTGQNRIPLLIDGSIDLECGSTTNTSARGKEVAFSTN--YFYAGTRLMAKR 135 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 + I + L+ ++ G+T E L A ++ ++ + + + A Sbjct: 136 ESHIGDYADLAHKAVATVGGSTNEKVLRRQLDAEHVDADVVLTKDYADALREVANGKAAA 195 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 D LY L+ P+ ++ + P A + + D + +V T ++ + E Sbjct: 196 LALDDVLLYGLRANASDPTTWEVVGKTLQVEPYACMVRKDDPTFKRLVDGTFARLMKSSE 255 Query: 254 LGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALG 290 + + + P G+D +G L Sbjct: 256 ---FARLYAKWFESPIPPR-----GVDLHMPMGPELK 284 >gi|111020580|ref|YP_703552.1| glutamate binding protein solute binding protein family [Rhodococcus jostii RHA1] gi|110820110|gb|ABG95394.1| probable glutamate binding protein, bacterial solute binding protein family protein [Rhodococcus jostii RHA1] Length = 336 Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats. Identities = 58/265 (21%), Positives = 103/265 (38%), Gaps = 10/265 (3%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRA 66 ++ L S L +I RG L GI+ F+ G GFDVD Sbjct: 74 ALASLRPAATPDVRAPGSSLAEITARGRLIVGIDQNTNLFSFRDPTTGMLMGFDVDVAGE 133 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 ++ +F DPS++++ L + +RF ALQ++ +D++ ++T T R S +AF + + Sbjct: 134 MARDLFGDPSRVEFRLLTSGDRFDALQNEDVDLVVKSTSITCER--SERVAFSTVYFQAY 191 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 Q ++ K GIS + L+G +C TT+ T+ + ++ Sbjct: 192 QRLLVPKGSGISGPADLAGKRVCTAGDTTSLDTVRRVQPEA----TIVAVPDWDDCLVVL 247 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + + DA + D S L L + I+ + P + + + V+ T Sbjct: 248 QQRQADAASTDDSILAGLAAQDPN---LEIVGPPLESEPYGIGVNKNHDDLVRFVNGTLD 304 Query: 247 AMVTAEELGITQKNINQVSKDTTNP 271 M N V + P Sbjct: 305 RMRADGTWTRLYDNWLTVLGPSAGP 329 >gi|116513425|ref|YP_812331.1| amino acid ABC transporter periplasmic protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116092740|gb|ABJ57893.1| amino acid ABC transporter substrate-binding protein, PAAT family [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 286 Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats. Identities = 65/288 (22%), Positives = 116/288 (40%), Gaps = 30/288 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI----------LGDIKKRGFLKCGINTGLVGFAEV 50 M + ++ FT + N+ + +IK+RG+++ + L + V Sbjct: 11 MGIVALIVVVSAAYFGFTQPNLNSGTAGSRWSNENGVSEIKRRGYIRVAVFGDLPPYGWV 70 Query: 51 KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 G G+DV R ++ + KI+++ +NA R L S + DI+ N T R Sbjct: 71 NEQGKRVGYDVYLARRIAKDL---NVKIRFIQVNANNRVDTLNSNKADIVLANFTVTPER 127 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 + + A G I K I+S +L G + V GTT E +YF A Sbjct: 128 KDVVDFA--KPYMKVSVGVISPKNAPINSAQELKGKKLIVTKGTTAE----NYF-AKQSG 180 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 + + F+ + A + R A D S LYA P V + I + +APA+ Sbjct: 181 VNLLKFDSKTQQFNALKNGRGAALADDNSYLYAWVK--KNPKYVVGIKSIGPRQYVAPAV 238 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ-----VSKDTTNPDV 273 +G+ +++ WT++ + + G ++ + KD D+ Sbjct: 239 KKGN---RSLLKWTNHEITKLTKEGFFVQDYQKELAPYFGKDIKPTDI 283 >gi|238765553|ref|ZP_04626466.1| Extracellular solute-binding protein, family 3 [Yersinia kristensenii ATCC 33638] gi|238696231|gb|EEP89035.1| Extracellular solute-binding protein, family 3 [Yersinia kristensenii ATCC 33638] Length = 284 Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats. Identities = 59/260 (22%), Positives = 99/260 (38%), Gaps = 16/260 (6%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSK 77 S + +A L DIK+ G ++ + F + G+DVD A++ + K Sbjct: 24 SGAAHADKLDDIKQAGVVRIAVFDSNPPFGYIDPQTKKLVGYDVDVANAIAKDLG---VK 80 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++ N R L SK++D+++ N T R + + + GQ FI HK + Sbjct: 81 VELRATNPANRIPLLTSKKVDLIAANFTITDDRAKEVNFSL--PYFATGQKFIAHKG-VL 137 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + ++G I GT E+TL D + I ++ A R A T D Sbjct: 138 KTPEDIAGLRIGADKGTVQEITLRDRYPTA----KVISYDDTPVAFTALRNGNVQAITQD 193 Query: 198 ISALYALKLTND--RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + L L + ++ I P I+K I +G+ V+ T V E+ G Sbjct: 194 DAKLVGLLGNLPAAQKADFEISPFSITKEYQGVGIPKGEDRLTAQVNETL---VKLEKDG 250 Query: 256 ITQKNINQVSKDTTNPDVQR 275 K ++ T R Sbjct: 251 EAAKIYDRWFGPETKAAQPR 270 >gi|27379495|ref|NP_771024.1| substrate-binding protein [Bradyrhizobium japonicum USDA 110] gi|27352647|dbj|BAC49649.1| bll4384 [Bradyrhizobium japonicum USDA 110] Length = 302 Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 88/252 (34%), Gaps = 10/252 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD----DPSKIQY 80 L IK+ G + G+ V F+ + G+ +D C + I D + Sbjct: 25 GTLKKIKETGAITLGVRDSAVPFSYIDEKQKTVGYAIDICMKIVEEIKAELKLDKLAVNE 84 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + + R + + ID+ +T R+ + + F+ K + V Sbjct: 85 NLVTSSNRIPLMANGTIDLECGSTTNNADRQKQVWF--TNTHFLTASRFVSKKASKLDQV 142 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L G ++ AGTT L A + + + + V E R +A+ D Sbjct: 143 DDLKGKAVVSVAGTTNITQLNKANAARALGINVMNAKDVPEAFLMVETDRAEAFVMDDIQ 202 Query: 201 LYALKLTNDRPSEHVILPDIIS-KSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L A+ + PS + I S P + + D ++ +V + + E+ +K Sbjct: 203 LAAMIASAKDPSLYAISSGAFSDPEPYGIMLRKDDAQFKAVVDRATAKLYKSPEI---EK 259 Query: 260 NINQVSKDTTNP 271 N+ + P Sbjct: 260 IYNKWFMEPVPP 271 >gi|270489688|ref|ZP_06206762.1| glutamate-aspartate periplasmic-binding protein [Yersinia pestis KIM D27] gi|270338192|gb|EFA48969.1| glutamate-aspartate periplasmic-binding protein [Yersinia pestis KIM D27] Length = 259 Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats. Identities = 44/238 (18%), Positives = 91/238 (38%), Gaps = 9/238 (3%) Query: 38 CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQ 93 G V F+ G+ D+ + AI + + +++ +P+ ++ R LQ Sbjct: 1 MGHRESSVPFSYYDNQQKVVGYSQDYSNLIVDAIRKELNAPNLEVKLIPITSQNRIPLLQ 60 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153 + D +T L R+ + G + K + L+G ++ V +G Sbjct: 61 NGTFDFECGSTTNNLERQQQAAF--SNTIFVVGTRLLTKKDSEVKDFKDLAGKAVVVTSG 118 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 TT+E+ L + NM I + + + R A+ D + L + +P E Sbjct: 119 TTSEVLLNKLNEKDNMNMRIISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDE 178 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 I+ S+ + + D + ++ T TA+ G+ +K+ ++ K+ P Sbjct: 179 WSIVGTPQSEEAYGCMMRKNDPAFKALLDKTI---ATAQTTGVAEKSFDRWFKNPIPP 233 >gi|315605387|ref|ZP_07880430.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Actinomyces sp. oral taxon 180 str. F0310] gi|315312956|gb|EFU61030.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Actinomyces sp. oral taxon 180 str. F0310] Length = 299 Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats. Identities = 59/261 (22%), Positives = 106/261 (40%), Gaps = 18/261 (6%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 TS IK+ G + GI + F + A+G G+DV + +++ + Sbjct: 38 SATSAQVGDRSPEQIKEAGEIVIGIFSDKAPFGYIDADGKPAGYDVVYGDRIAADLGVTA 97 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 +Y+P++A R L S ++DI N T R + A + G + Sbjct: 98 ---KYVPVDAAARTEVLASNKVDITLANFTVTPERAEKVDFAN--PYFKVSLGVVSPSSA 152 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I+ V QL+G ++ V GTT E YF+A++ + +++ + A R DA++ Sbjct: 153 EITDVGQLAGKTLIVTKGTTAEA----YFEANHPEVKLQKYDQYSDAYQALEDGRGDAFS 208 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D + + A + P V + + S +A A+ +G+ + W + + E Sbjct: 209 TDNTEVIAWAIA--HPGFSVGIKSLGETSYIAAAVKKGNAPLLD---WLNNQLTELGEEN 263 Query: 256 ITQKNINQ----VSKDTTNPD 272 K+ Q V D PD Sbjct: 264 FFHKDYEQTLAPVYGDAATPD 284 >gi|320095228|ref|ZP_08026929.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Actinomyces sp. oral taxon 178 str. F0338] gi|319977842|gb|EFW09484.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Actinomyces sp. oral taxon 178 str. F0338] Length = 302 Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats. Identities = 55/235 (23%), Positives = 103/235 (43%), Gaps = 14/235 (5%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 IK+ G + GI + F + A+G G+DV + +++ + +Y+P++A Sbjct: 52 EQIKEAGEITIGIFSDKAPFGYIDADGKPAGYDVVYGDRIAADLGVTA---KYVPVDAAA 108 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 R LQS ++DI N T R + A + G + I+ VSQL+G + Sbjct: 109 RTEVLQSNKVDITLANFTVTPERAEKVDFAN--PYFKVSLGVVSPASAEITDVSQLAGKT 166 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 + V GTT E YF+A++ + +++ + A R DA++ D + + A + Sbjct: 167 LIVTKGTTAEA----YFEANHPEVELQKYDQYSDAYQALEDGRGDAFSTDNTEVIAWAIA 222 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 P V + + S +A A+ +G++ + W + +V E K+ Sbjct: 223 --HPGFGVGIKSLGETSYIAAAVKKGNSALLD---WLNNQLVDLGEEDFFHKDYE 272 >gi|306833969|ref|ZP_07467093.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus bovis ATCC 700338] gi|304423970|gb|EFM27112.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus bovis ATCC 700338] Length = 281 Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats. Identities = 62/281 (22%), Positives = 117/281 (41%), Gaps = 22/281 (7%) Query: 1 MYKDF----FVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVKA 52 M K S+ +++ FT +T A + I+ G LK G+ + F A Sbjct: 12 MKKKLGLAILASLSLILLTLFTGKTTFADSVSEQVKKIQDAGVLKVGVKQDVPNFGYYSA 71 Query: 53 -NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G ++G +VD + ++ + K+ + + A+ R L + QIDIL T R+ Sbjct: 72 ETGKYEGMEVDLAKKIAKKLG---VKVSFTAVTAQTREALLDNGQIDILIATYTITEERQ 128 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 S A Y+D GF+++K KG S++ L G +I V G+TT+ + +Y +AHN+ + Sbjct: 129 AS--YAISNPYYYDEIGFLVNKSKGYDSIADLDGLTIGVAQGSTTKSAIEEYGEAHNLSF 186 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + + E+ + A+R A++ D S L + I+ + + A Sbjct: 187 NFVQLGSYPELAISLYANRISAFSVDKSILTGYVSK-----KTEIIDEGFNTQEYGIAAT 241 Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272 + + + ++ G QK ++ + Sbjct: 242 KSNQSVIDYINDLLADWKA---DGSLQKLYDKYDLTPAKAN 279 >gi|77460756|ref|YP_350263.1| extracellular solute-binding protein [Pseudomonas fluorescens Pf0-1] gi|77384759|gb|ABA76272.1| L-glutamate-binding protein / L-aspartate-binding protein [Pseudomonas fluorescens Pf0-1] Length = 304 Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats. Identities = 46/245 (18%), Positives = 88/245 (35%), Gaps = 8/245 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPS----KIQ 79 L IK+ G + G + F+ + A+G G+ D A+ AI D +++ Sbjct: 28 GTLKKIKESGVITLGHRDASIPFSYIADASGKPVGYSHDIQLAIVEAIKKDLDLPNLQVK 87 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 Y + ++ R +Q+ +D+ +T + R+ + + + G + Sbjct: 88 YNLVTSQTRIPLVQNGTVDVECGSTTNNVERQQQVDFSVGI--FEIGTRLLSKADSKYKD 145 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L G ++ AGTT+E L M + I + E + R A+ D + Sbjct: 146 FDDLKGKNVVTTAGTTSERILKAMNADKQMGMNVISAKDHGESFQMLESGRAVAFMMDDA 205 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQ 258 L + S+ + S + +GD + V A + E+ I + Sbjct: 206 LLAGEAAKAKKASDWAVTGTPQSYEIYGCMMRKGDEPFKKAVDDAIKATYASGEINKIYE 265 Query: 259 KNINQ 263 K Q Sbjct: 266 KWFMQ 270 >gi|66045739|ref|YP_235580.1| extracellular solute-binding protein [Pseudomonas syringae pv. syringae B728a] gi|302186218|ref|ZP_07262891.1| extracellular solute-binding protein [Pseudomonas syringae pv. syringae 642] gi|63256446|gb|AAY37542.1| extracellular solute-binding protein, family 3 [Pseudomonas syringae pv. syringae B728a] Length = 283 Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats. Identities = 52/258 (20%), Positives = 98/258 (37%), Gaps = 4/258 (1%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 + +L T + S L + KRG L G + + A+G +GFD+D R ++ Sbjct: 15 LSASFMLANTVQAAEGSKLDAVLKRGNLVVGTGSTNAPWHFQGADGKLQGFDIDIGRIIA 74 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 +F+DPSK++++ ++ R L + ++DI + T R + Y +G Sbjct: 75 KGLFNDPSKVEFVVQSSDARIPNLLTDKVDISCQFITVTASRAQQVAFTL--PYYREGVA 132 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 ++ + L A V + + K ++ V+ + A + Sbjct: 133 LLLPANSKYKEIDDLKAAGDDVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLMYQAINS 192 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 R D D S++ L + P + S A A+ +GD +W N V+ + Sbjct: 193 GRADTAATDQSSVKYLMVQ--NPGRYRSPAFAWSPQTYACAVKRGDQDWLNFVNTALHEA 250 Query: 249 VTAEELGITQKNINQVSK 266 +T E + Q Sbjct: 251 MTGVEFPAYAASFKQWFG 268 >gi|17544841|ref|NP_518243.1| substrate-binding periplasmic (PBP) ABC transporter protein [Ralstonia solanacearum GMI1000] gi|17427130|emb|CAD13650.1| probable substrate-binding periplasmic (pbp) abc transporter protein [Ralstonia solanacearum GMI1000] Length = 299 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 51/270 (18%), Positives = 103/270 (38%), Gaps = 12/270 (4%) Query: 9 ILCLIILFFTSFSTNASI--LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 + + L ++F AS L I++ G ++ V F+ G G+ +D C Sbjct: 11 AMLAVPLAVSAFHAMASTPTLDRIRETGIIRLAYREDSVPFSYTDG-GKPIGYSIDICSR 69 Query: 67 LSSAI----FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + AI K+QYLP+ A R + S + D+ +T+ R + Sbjct: 70 VVDAIRTSLKRPELKVQYLPVTAANRMDTIASGKADLECGSTNNAPERREKVAFTI--PH 127 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y ++ G+ L G ++ G++ + A + + ++ Sbjct: 128 YITKGRMLVKVSSGLQQWDDLHGKTVVAARGSSASDVMHKLNDATGLGMRTVDTNDLKTA 187 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A + DA+ GD L ++ T+D PS++V+ S A + + D ++ +V Sbjct: 188 FAMLSTGKADAFAGDDVLLAGMRATSDNPSDYVVAGKTQLVSSYAMMMSKQDADFKKLVD 247 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPD 272 + ++ E+ QK + + P+ Sbjct: 248 QSMTRLIVDGEV---QKLYKKWFQQPIPPN 274 >gi|148985280|ref|ZP_01818503.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus pneumoniae SP3-BS71] gi|147922478|gb|EDK73597.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus pneumoniae SP3-BS71] gi|301799733|emb|CBW32298.1| putative periplasmic solute-binding transport protein [Streptococcus pneumoniae OXC141] Length = 288 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 56/287 (19%), Positives = 111/287 (38%), Gaps = 26/287 (9%) Query: 1 MYKDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTGLVG 46 ++K + L F + + A + + KK G L+ + Sbjct: 3 LFKPLLTVLALAFALIFITACSSGGNAGPSSGKTTAKARTIDENKKSGELRIAVFGDKKP 62 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F V +G ++G+D++ L+ + K++Y+ ++A R L S ++DI N Sbjct: 63 FGYVDNDGSYQGYDIELGNQLAQDLG---VKVKYISVDAANRAEYLISNKVDITLANFTV 119 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T R+ + A G + K I+ V QL G ++ V GTT E YF+ Sbjct: 120 TDERKKQVDFAL--PYMKVSLGVVSPKTGLITDVKQLEGKTLIVTKGTTAET----YFEK 173 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 ++ + +++ + A R DA++ D + + A L N V + + + Sbjct: 174 NHPEIKLQKYDQYSDSYQALLDGRGDAFSTDNTEVLAWALENK--GFEVGITSLGDPDTI 231 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSKDTTNPD 272 A A+ +G+ E + ++ + +K ++ D D Sbjct: 232 AAAVQKGNQELLDFINKDIEKLGKENFFHKAYEKTLHPTYGDAAKAD 278 >gi|161507579|ref|YP_001577533.1| amino acid ABC transporter substrate-binding protein [Lactobacillus helveticus DPC 4571] gi|260101514|ref|ZP_05751751.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus helveticus DSM 20075] gi|300812411|ref|ZP_07092841.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|160348568|gb|ABX27242.1| amino acid ABC transporter substrate-binding protein [Lactobacillus helveticus DPC 4571] gi|260084657|gb|EEW68777.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus helveticus DSM 20075] gi|300496578|gb|EFK31670.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|323466463|gb|ADX70150.1| Amino acid ABC transporter substrate-binding protein [Lactobacillus helveticus H10] gi|328466385|gb|EGF37537.1| amino acid ABC transporter substrate-binding protein [Lactobacillus helveticus MTCC 5463] Length = 286 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 65/288 (22%), Positives = 116/288 (40%), Gaps = 30/288 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI----------LGDIKKRGFLKCGINTGLVGFAEV 50 M + ++ FT + N+ + +IK+RG+++ + L + V Sbjct: 11 MGIVALIVVVSAAYFGFTQPNLNSGTAGSRWSNENGVSEIKRRGYIRVAVFGDLPPYGWV 70 Query: 51 KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 G G+DV R ++ + KI+++ +NA R L S + DI+ N T R Sbjct: 71 NDQGKRVGYDVYLARRIAKDL---NVKIRFIQVNANNRVDTLNSNKADIVLANFTVTPER 127 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 + + A G I K I+S +L G + V GTT E +YF A Sbjct: 128 KDVVDFA--KPYMKVSVGVISPKNAPINSAQELKGKKLIVTKGTTAE----NYF-AKQSG 180 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 + + F+ + A + R A D S LYA P V + I + +APA+ Sbjct: 181 VNLLKFDSKTQQFNALKNGRGAALADDNSYLYAWVK--KNPKYVVGIKSIGPRQYVAPAV 238 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ-----VSKDTTNPDV 273 +G+ +++ WT++ + + G ++ + KD D+ Sbjct: 239 KKGN---RSLLKWTNHEITKLTKEGFFVQDYQKELAPYFGKDIKPTDI 283 >gi|227903962|ref|ZP_04021767.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus acidophilus ATCC 4796] gi|227868353|gb|EEJ75774.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus acidophilus ATCC 4796] Length = 286 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 69/300 (23%), Positives = 124/300 (41%), Gaps = 43/300 (14%) Query: 1 MY-KDFF---VSILCLIILFFTSFSTNASI----------------LGDIKKRGFLKCGI 40 M K+ F +SIL ++++ +++ A + +IK+RG+L+ + Sbjct: 1 MKVKNIFNWTISILAILLVIISAYFGFAQKGLNSGTSASRWSNQNGVSEIKRRGYLRVAV 60 Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 L + V +NG G+DV ++ + KI+++ +NA R L S + DI+ Sbjct: 61 FGDLPPYGWVNSNGKRVGYDVYLAHRMAQDLG---VKIRFVQVNANNRVDTLNSNKADII 117 Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 N T R+ + A G I K I+S +QL + V GTT E Sbjct: 118 LANFTVTPERKDVVDFA--KPYMKVSVGVISPKSAPITSANQLKNKKLIVTKGTTAE--- 172 Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220 +YF + + + F+ + A + R A D S LYA P V + I Sbjct: 173 -NYF-SQQKNVNLLKFDSKTQQFNALKNGRGAALADDNSYLYAWVKQ--NPKYTVGIKSI 228 Query: 221 ISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGID 280 K ++PA+ +G+ +++ W + IT+ N + N +++ + G D Sbjct: 229 GPKQYISPAVKKGN---RSLLKWINKE--------ITKLNKESFFVEDYNKELRPYFGKD 277 >gi|225858444|ref|YP_002739954.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae 70585] gi|225720039|gb|ACO15893.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae 70585] Length = 254 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 54/256 (21%), Positives = 101/256 (39%), Gaps = 14/256 (5%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRAL 67 ++ L L + + DI+KRG L G+ + F G + G + D + + Sbjct: 1 MISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYSGIETDLAKMV 60 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + KI+Y+P+ A+ R L ++Q+D+ T R+ Y D Sbjct: 61 ADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKLYNF--TSPYYTDAS 115 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 GF+++K I + L+G +I V G+ T+ + + K + + + E+ + Sbjct: 116 GFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLTFKFVELGSYPELITSLH 175 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 AHR DA++ D S L +L D S + +TE + + Sbjct: 176 AHRIDAFSVDRSILSGYTNK-----RTALLDDSFKPSDYGIVTKKSNTELNDYLDNLVTK 230 Query: 248 MVTAEELGITQKNINQ 263 + G QK ++ Sbjct: 231 W---SKDGSLQKLYDR 243 >gi|16329306|ref|NP_440034.1| hypothetical protein sll0224 [Synechocystis sp. PCC 6803] gi|1651787|dbj|BAA16714.1| sll0224 [Synechocystis sp. PCC 6803] Length = 298 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 58/281 (20%), Positives = 112/281 (39%), Gaps = 16/281 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L+ + S +L I++ G + G V FA V G+W GF Sbjct: 1 MKKFACLALSVLLSGAASLPSWAGEVLDRIEQTGVINAGTRKDAVPFAYVDDQGEWVGFS 60 Query: 61 VD---FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 +D R + A P K+ + A RF + ++ ID+ ++ +T R + + Sbjct: 61 IDLLELIRQEAEARLGKPIKLNMVEATADNRFDLITNQTIDLECASSTFTWNRTAVVDFS 120 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + DG I + S L+G +I V TT + D+ + + Sbjct: 121 VS--YFADGTKIITGVDSDLESADSLAGRAIGVIPDTTNAKAILDFQPGA----TIVEVK 174 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDTE 236 + A A +A+ GD L LK T+D P + ++P+ A + + D++ Sbjct: 175 DQADGMAKLEAGEIEAFAGDGIVLAGLKKTSDNPQQWKVVPNFPYQYEAYACLLPKDDSD 234 Query: 237 WYNIVSWTHYAMVTA------EELGITQKNINQVSKDTTNP 271 W N+V+++ + + I ++ ++ + P Sbjct: 235 WRNLVNYSLVKYMEGVISDQTAAVEIYERWFDEETGVAPYP 275 >gi|167035334|ref|YP_001670565.1| extracellular solute-binding protein [Pseudomonas putida GB-1] gi|166861822|gb|ABZ00230.1| extracellular solute-binding protein family 3 [Pseudomonas putida GB-1] Length = 305 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 47/253 (18%), Positives = 89/253 (35%), Gaps = 11/253 (4%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPSKIQYL 81 L IK G + G + F+ + + G+ D A+ A+ K++Y Sbjct: 28 GTLKKIKDSGTITLGHRDSSIPFSYLAGKPEPVGYSHDIQLAVVDALKKQLGTDIKVKYN 87 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG---IS 138 + ++ R +Q+ +D+ +T + R+ +G + + G + K G Sbjct: 88 LVTSQTRIPLVQNGTVDLECGSTTNNVERQQQVGFSVGI--FEVGTRLLTKVKDGQPAYK 145 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 L+G ++ AGTT+E L MK + I + E + R A+ D Sbjct: 146 DFPDLAGKNVVTTAGTTSERILKAMNADKQMKMNVISAKDHGEAFNMLESGRAVAFMMDD 205 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 + L +PS+ VI S + + D + V + E+ Sbjct: 206 ALLAGEMAKARKPSDWVITGTPQSYEIYGCMVRKEDAAFKKAVDDAIVGYFKSGEVN--- 262 Query: 259 KNINQVSKDTTNP 271 K+ + P Sbjct: 263 KSYEKWFMQPIPP 275 >gi|222082710|ref|YP_002542075.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221727389|gb|ACM30478.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 262 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 54/257 (21%), Positives = 98/257 (38%), Gaps = 5/257 (1%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 + S L ++ RG L G + + A+ +GFD+D R ++ A+F DP K Sbjct: 3 AAAQQAKSKLDEVLARGHLVMGTGSTNAPWHFKSADDKLQGFDIDMGRIVAKALFGDPDK 62 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 I+++ ++ R + + ++D+ + T R + +AF Y +G G ++ Sbjct: 63 IEFVNQSSDARIPNITTDKVDLTCQFMTVTGER--AQQIAFTIPYYREGVGLMLKADGKY 120 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + + L A V + A +E V+ I A + R DA D Sbjct: 121 ADYAALKAAGSSVTISVLQNVYAEAMVHAALPDATVDQYESVDLIYQALESGRADAVATD 180 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 S+L P + + A + +GD +W N V+ + +T E Sbjct: 181 QSSLAWYMTQ--NPGRYKDAGYGWNPQTYACGVKRGDQDWLNFVNTALHEAMTGVEFDFY 238 Query: 258 QKNI-NQVSKDTTNPDV 273 + KD T P + Sbjct: 239 AASYKKWFGKDLTPPQI 255 >gi|330981319|gb|EGH79422.1| extracellular solute-binding protein [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 283 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 53/258 (20%), Positives = 100/258 (38%), Gaps = 4/258 (1%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 + +L T + S L + KRG L G + + A+G +GFD+D R ++ Sbjct: 15 LSASFMLANTVQAAEGSKLDAVLKRGNLVVGTGSTNAPWHFQGADGKLQGFDIDIGRIIA 74 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 +F+DPSK++++ ++ R L + ++DI + T R + +A Y +G Sbjct: 75 KGLFNDPSKVEFVVQSSDARIPNLLTDKVDISCQFITVTASR--AQQVASTLPYYREGVA 132 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 ++ + L A V + + K ++ V+ + A + Sbjct: 133 LLLPANSKYKEIDDLKAAGDDVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLMYQAINS 192 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 R D D S++ L + P + S A A+ +GD +W N V+ + Sbjct: 193 GRADTAATDQSSVKYLMVQ--NPGRYRSPAFAWSPQTYACAVKRGDQDWLNFVNTALHEA 250 Query: 249 VTAEELGITQKNINQVSK 266 +T E + Q Sbjct: 251 MTGVEFPAYAASFKQWFG 268 >gi|300692873|ref|YP_003753868.1| amino-acid ABC transporter binding protein ybeJ [Ralstonia solanacearum PSI07] gi|299079933|emb|CBJ52610.1| Amino-acid ABC transporter binding protein ybeJ [Ralstonia solanacearum PSI07] Length = 299 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 51/275 (18%), Positives = 107/275 (38%), Gaps = 11/275 (4%) Query: 3 KDFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + +++L + + T + + L I+ G ++ V F+ +A G G+ + Sbjct: 6 RTRRLAVLAIPLAVSTVHAMASTPTLDRIRDTGTIRLAYREDSVPFSYSEA-GKPIGYSI 64 Query: 62 DFCRALSSAI----FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 D C + +I K+QY+P+ A R + S + D+ +T+ R + Sbjct: 65 DICSRVVESIRTSLKRPELKVQYVPVTAVNRMDTIASGKADLECGSTNNAPDRREKVAFT 124 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y ++ G+ L G ++ G++ + + M H + Sbjct: 125 I--PHYITKGRMLVKASSGLQQWDDLHGKTVVAARGSSASDVMHKLNDSTGMGMHTVDTN 182 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 ++ A + DA+ GD L ++ T+D PSE+V+ S A + + D E+ Sbjct: 183 DLKTAFAMLSTGKADAFAGDDVLLAGMRATSDNPSEYVVAGKTQLVSSYAMMLSKQDAEF 242 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272 +V + ++ E+ QK + + P+ Sbjct: 243 KKLVDQSMTRLIVDGEV---QKLYKKWFQQPIPPN 274 >gi|295677112|ref|YP_003605636.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] gi|295436955|gb|ADG16125.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] Length = 329 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 47/277 (16%), Positives = 93/277 (33%), Gaps = 12/277 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M++ C ++ F + L I G + G+ + F+ G Sbjct: 33 MHRVLLALTACGVVAFAGPARADELTGTLKKIHDDGVVVLGVREASIPFSYFDGK-RTVG 91 Query: 59 FDVDFCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + + + ++ + + + R L + QID+ +T T+ RE Sbjct: 92 YSQAIAMQIVDEIRKTLGMTQLRVHEITVTSSNRTPMLLNNQIDLECGSTTHTVERENVA 151 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + Y I K GI+ L+G + AGT+ E L + + Sbjct: 152 AFSDSFFQY--AVRMITRKNSGITDFRDLAGKPVVTTAGTSDERLLRSLNTEKQLNMRIM 209 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +E +A + R A+ D +Y K T+ P + ++ + A +GD Sbjct: 210 SARDHQEAFSAMKDGRAVAFVMDEPIVYGFKATDPHPDDFIVTGTPLGYEVYACMFRKGD 269 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + +V+ V ++ G ++ Q P Sbjct: 270 ESFRALVNRVI---VRSQTSGDAERLYRQWFTQPIPP 303 >gi|312864748|ref|ZP_07724979.1| major cell-binding factor [Streptococcus downei F0415] gi|311099875|gb|EFQ58088.1| major cell-binding factor [Streptococcus downei F0415] Length = 273 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 53/256 (20%), Positives = 102/256 (39%), Gaps = 14/256 (5%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDP 75 + + + IK G LK G+ + F + + G ++D + ++ + Sbjct: 28 AAGQAKLPAQVQKIKDAGVLKVGVKQDVPNFGYYDSKNDKYTGMEIDLAKKIADTLG--- 84 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 K+QY + A+ R L + Q DI+ R+ + Y+D GF+++K Sbjct: 85 VKVQYTAVTAQTREALLDNGQTDIMIATYTINDQRKA--NFSISNPYYYDEIGFLVNKDS 142 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 GI++ L G +I V G+ T+ +L + + +K+ + E+ A RA+R DA++ Sbjct: 143 GINNPKDLDGKTIGVAQGSKTKASLETFASDNGIKFKYVQLGSYPELVTALRAYRVDAFS 202 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D S L N++ IL A + +++ V+ ++ G Sbjct: 203 VDKSILTGYVSKNNK-----ILDQGFDTMEYGIASKKSNSQVTEYVNSLLAKW---QKDG 254 Query: 256 ITQKNINQVSKDTTNP 271 QK + P Sbjct: 255 SLQKLYKKYKLTPAKP 270 >gi|91784493|ref|YP_559699.1| ABC glutamate/aspartate transporter, periplasmic ligand binding protein [Burkholderia xenovorans LB400] gi|91688447|gb|ABE31647.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia xenovorans LB400] Length = 292 Score = 187 bits (476), Expect = 2e-45, Method: Composition-based stats. Identities = 52/271 (19%), Positives = 91/271 (33%), Gaps = 14/271 (5%) Query: 9 ILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 L + S +A L I G + G+ + F+ G G+ Sbjct: 2 ALAAFGAVSLAGSVHADELTGTLKKIHDDGVVVLGVREASIPFSYFDGKGT-VGYSQTIA 60 Query: 65 RALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 + + K+ + + + R L + QID+ +T T+ RE + Sbjct: 61 LQIVDEIKKTLGMPQLKVHEITVTSSNRTPMLLNNQIDLECGSTTHTVERESVAAFSDSF 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y I K GI+ L+G ++ AGT+ E L ++ Sbjct: 121 FQY--AVRMIARKSSGITDFQDLAGKTVVTTAGTSDERLLRRLNTDKHLNMRITSARDHL 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E A + R A+ D +Y K T+ RP + V+ + A +GD + N+ Sbjct: 179 EAFGAVKDDRAVAFVMDEPIVYGFKSTDPRPDDFVVTGTPLGYEVYACMFRKGDEPFRNL 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 V+ T+ E ++ Q P Sbjct: 239 VNGVIARGQTSGE---AERLYRQWFTQPIPP 266 >gi|237751561|ref|ZP_04582041.1| glutamine ABC transporter [Helicobacter bilis ATCC 43879] gi|229372927|gb|EEO23318.1| glutamine ABC transporter [Helicobacter bilis ATCC 43879] Length = 284 Score = 187 bits (476), Expect = 2e-45, Method: Composition-based stats. Identities = 63/251 (25%), Positives = 113/251 (45%), Gaps = 14/251 (5%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 S + IK G ++ G+ + F N ++KGFDV + + + D +KI+++P Sbjct: 39 QESAIETIKNNGKIRIGVFSDKPPFGYY-ENNEYKGFDVYIAKRFAKDLLGDENKIEFVP 97 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + A R AL++ ++DI+ N T RE + A Y ++ K I+S Q Sbjct: 98 VEAAARASALKANKVDIIMANFTKTPEREKQVDFAK---PYMKVTLGVVSKDGAITSEEQ 154 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G ++ V GTT AD + + + + FE+ E A++ + DA + D + LY Sbjct: 155 LQGKTLIVNKGTT-----ADIYFSKQSGINLLKFEQNTETFQAFQQGKGDALSHDSTMLY 209 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 A P V + I + +APA+ QG+ E + W + + T ++ G ++ N Sbjct: 210 AWVK--HNPDYKVGIQSIGEQDVIAPAVKQGNKELLD---WLNTEIDTLQKEGFFKEAYN 264 Query: 263 QVSKDTTNPDV 273 ++ Sbjct: 265 ATLASEFGSEI 275 >gi|58337338|ref|YP_193923.1| glutamine ABC transporter substrate-binding protein [Lactobacillus acidophilus NCFM] gi|58254655|gb|AAV42892.1| glutamine ABC transporter substrate-binding protein [Lactobacillus acidophilus NCFM] Length = 286 Score = 187 bits (476), Expect = 2e-45, Method: Composition-based stats. Identities = 70/300 (23%), Positives = 125/300 (41%), Gaps = 43/300 (14%) Query: 1 MY-KDFF---VSILCLIILFFTSFSTNASI----------------LGDIKKRGFLKCGI 40 M K+ F +SIL ++++ +++ A + +IK+RG+L+ + Sbjct: 1 MKVKNIFNWTISILAILLVIISAYFGFAQKGLNSGTSASRWSNQNGVSEIKRRGYLRVAV 60 Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 L + V +NG G+DV ++ + KI+++ +NA R L S + DI+ Sbjct: 61 FGDLPPYGWVNSNGKRVGYDVYLAHRMTQDLG---VKIRFVQVNANNRVDTLNSNKADII 117 Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 N T R+ + A G I K I+S +QL + V GTT E Sbjct: 118 LANFTVTPERKDVVDFA--KPYMKVSVGVISPKSAPITSANQLKNKKLIVTKGTTAE--- 172 Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220 +YF + + + F+ + A + R A D S LYA P V + I Sbjct: 173 -NYF-SQQKNVNLLKFDSKTQQFNALKNGRGAALADDNSYLYAWVKQ--NPKYTVGIKSI 228 Query: 221 ISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGID 280 K ++PA+ +G+ +++ WT+ IT+ N + N +++ + G D Sbjct: 229 GPKQYISPAVKKGN---RSLLKWTNKE--------ITKLNKESFFVEDYNKELRPYFGKD 277 >gi|227819409|ref|YP_002823380.1| ABC transporter substrate-binding protein [Sinorhizobium fredii NGR234] gi|227338408|gb|ACP22627.1| putative substrate-binding component of ABC transporter [Sinorhizobium fredii NGR234] Length = 298 Score = 187 bits (476), Expect = 2e-45, Method: Composition-based stats. Identities = 59/251 (23%), Positives = 100/251 (39%), Gaps = 5/251 (1%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 +S L ++ RG L G + + A +GFDVD R ++ A+F DP KI+Y+ Sbjct: 45 SSKLDEVLARGHLILGTGSTNAPWHFKSAEDKLQGFDVDMGRIIAKALFGDPDKIEYVNQ 104 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 ++ R + + ++D+ + T R + +AF Y +G G +M + + L Sbjct: 105 SSDARIPNITTDKVDLTCQFMTVTGER--AQQIAFTIPYYREGVGLMMKADGKYADYAAL 162 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 A V + D A + +E V+ I A + R DA D S+L Sbjct: 163 KAAGSSVTISVLQNVYAEDMVHAALPEATVDQYESVDLIYQALESGRADAAATDQSSLAW 222 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN- 262 P + + A + +GD +W N V+ + +T E K+ Sbjct: 223 YMTQ--NPGRYKDAGYGWNPQTYACGVKRGDQDWLNFVNTALHEAMTGVEFDFYAKSFKT 280 Query: 263 QVSKDTTNPDV 273 KD T P + Sbjct: 281 WFGKDLTPPQI 291 >gi|300705482|ref|YP_003747085.1| amino-acid ABC transporter binding protein ybej [Ralstonia solanacearum CFBP2957] gi|299073146|emb|CBJ44504.1| Amino-acid ABC transporter binding protein ybeJ [Ralstonia solanacearum CFBP2957] Length = 299 Score = 187 bits (476), Expect = 2e-45, Method: Composition-based stats. Identities = 45/275 (16%), Positives = 103/275 (37%), Gaps = 11/275 (4%) Query: 3 KDFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + +++L + + + + L I+ G ++ V F+ G G+ + Sbjct: 6 RTRRLAVLAVPLAVSAVHAMASTPTLDRIRDTGTIRLAYREDSVPFSYTDG-GKPIGYSI 64 Query: 62 DFCRALSSAI----FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 D C + AI K+QY+P+ A R + S + D+ +T+ R + Sbjct: 65 DICSRVVDAIRTSLKRPELKVQYVPVTAANRMDTIASGKADLECGSTNNAPDRREKVAFT 124 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y ++ G+ L G ++ G++ + A M + Sbjct: 125 I--PHYITKGRMLVKASSGLQQWEDLHGKTVVAARGSSAADVMHKLNDATGMGMRTVDTN 182 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 ++ + + DA+ GD L ++ T+D P+++V+ S A + + D ++ Sbjct: 183 DLKTAFSMLSTGKADAFAGDDVLLAGMRATSDNPTDYVVAGKTQLVSSYAMMMSKQDADF 242 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272 ++ + ++ E+ QK + + P+ Sbjct: 243 KKLIDQSMTRLIVDGEV---QKFYKKWFQQPIPPN 274 >gi|330941851|gb|EGH44588.1| extracellular solute-binding protein [Pseudomonas syringae pv. pisi str. 1704B] Length = 283 Score = 187 bits (476), Expect = 2e-45, Method: Composition-based stats. Identities = 52/258 (20%), Positives = 98/258 (37%), Gaps = 4/258 (1%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 + +L T + S L + KRG L G + + A+G +GFD+D R ++ Sbjct: 15 LSASFMLANTVQAAEGSKLDAVLKRGNLVVGTGSTNAPWHFQGADGKLQGFDIDIGRIIA 74 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 +F+DPSK++++ ++ R L + ++DI + T R + Y +G Sbjct: 75 KGLFNDPSKVEFVVQSSDARIPNLLTDKVDISCQFITVTASRAQQVAFTL--PYYREGVA 132 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 ++ + L A V + + K ++ V+ + A + Sbjct: 133 LLLPVNSKYKEIDDLKAAGDDVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLMYQAINS 192 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 R D D S++ L + P + S A A+ +GD +W N V+ + Sbjct: 193 GRADTAATDQSSVKYLMVQ--NPGRYRSPAFAWSPQTYACAVKRGDQDWLNFVNTALHEA 250 Query: 249 VTAEELGITQKNINQVSK 266 +T E + Q Sbjct: 251 MTGVEFPAYAASFKQWFG 268 >gi|32266980|ref|NP_861012.1| bifunctional adhesin/ABC transporter aspartate/glutamate-binding protein [Helicobacter hepaticus ATCC 51449] gi|32263032|gb|AAP78078.1| probable ABC-type amino-acid transporter periplasmic solute-binding protein [Helicobacter hepaticus ATCC 51449] Length = 260 Score = 187 bits (476), Expect = 2e-45, Method: Composition-based stats. Identities = 58/241 (24%), Positives = 97/241 (40%), Gaps = 8/241 (3%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDV 61 K + L + NA +L DIKK+ L G+ + FA + KGF++ Sbjct: 8 KRLLKVAGLFLFLSMFALQANAGMLEDIKKKDELVVGVKNDIPHFALLDQKTKEIKGFEI 67 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D + L+ I + +K++ + +NAK R L + ID++ T R+ + + Sbjct: 68 DVAKLLAKHILGNENKLKLVAVNAKTRGPLLDNGSIDVVIATFTITPERKRTYNFSE--P 125 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y D G ++ K+KG S++ + A+I V T++ +A K + F Sbjct: 126 YYKDSVGLLVLKEKGYKSLADMKDATIGVAQAATSKRAIASAAKKLGINVKFNEFPDYPS 185 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 I AA A R DA++ D S L IL D + D E+ + Sbjct: 186 IKAALDAKRIDAFSVDKSILLGYVDKKS-----EILSDSFEPQEYGIVSPKKDKEFAAFI 240 Query: 242 S 242 Sbjct: 241 D 241 >gi|116617275|ref|YP_817646.1| amino acid ABC transporter periplasmic protein [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116096122|gb|ABJ61273.1| amino acid ABC transporter substrate-binding protein, PAAT family [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 281 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 61/253 (24%), Positives = 110/253 (43%), Gaps = 14/253 (5%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 + + +IKK G +K + L + V NG +G+D++ + ++ + K++Y+ Sbjct: 35 QSGRTVKEIKKSGEIKIAVFGDLKPYGWVDKNGKRQGYDIELAKKVAKDLG---VKVKYV 91 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 +NA R AL S ++D+ N T R+ + A G K K I+ V Sbjct: 92 QVNANARVDALNSGKVDLALANFTVTPERKKVIDFA--KPYMKVSIGVASKKSKLITKVD 149 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 QL G + V GTT E YF + K + F+ + AA + R DA T D S L Sbjct: 150 QLHGKKLIVNKGTTAET----YFTKNYTKASLLKFDSKTQQFAALKDGRADAITDDNSYL 205 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 +A + P V + + +S ++P + +G+ +++ WT + + K+ Sbjct: 206 FAWVKS--HPDYKVGIKKLGEQSYISPGVQKGN---KSLLKWTDKEINKLNKNQFFTKDY 260 Query: 262 NQVSKDTTNPDVQ 274 ++ DV+ Sbjct: 261 DKTLAPYFGKDVK 273 >gi|58198299|gb|AAW65857.1| putative lipoprotein P30Hm13 [Helicobacter muridarum] Length = 268 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 57/247 (23%), Positives = 98/247 (39%), Gaps = 14/247 (5%) Query: 3 KDFFVSILCLIILFFTSFSTNAS------ILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55 K F +++ +I + + S + + + IKKRG L G+ FA + Sbjct: 9 KLFIGALIAIIGMLAIACSESGNNKKANNQIEAIKKRGVLIVGVKKDAPNFALMNHKTQQ 68 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +GF++D + L+ + D +KI+ P+ AK R L + +DI+ T R+ + Sbjct: 69 IEGFEIDMAKMLAKQMLGDENKIKLEPVTAKTRGPLLDNGTLDIVIATFTITDERKKTYN 128 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 Y D GF++ K+ S L I V TT + + + Sbjct: 129 FTES--YYSDPIGFLVLKENNFKSFKDLDDKVIGVAQAATTNKVVTEAAADLGITVKIKE 186 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F + +A + R DA++ D S L N+ IL D + A + D Sbjct: 187 FPDYPSLKSALDSKRIDAFSVDKSILRGYLDANN-----EILDDNLKAQEYGMATRKEDI 241 Query: 236 EWYNIVS 242 +W N V+ Sbjct: 242 DWSNYVN 248 >gi|229493071|ref|ZP_04386866.1| bacterial extracellular solute-binding protein, family 3 [Rhodococcus erythropolis SK121] gi|229320101|gb|EEN85927.1| bacterial extracellular solute-binding protein, family 3 [Rhodococcus erythropolis SK121] Length = 328 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 48/255 (18%), Positives = 95/255 (37%), Gaps = 10/255 (3%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPS 76 S L I+ RG L G++TG + A G +GFDVD R ++ + DP Sbjct: 76 ASPQPPTPSLDAIRARGRLIVGLDTGSNLMSFRDPATGRLEGFDVDIAREIARDLLGDPE 135 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 KI+Y L + +R ALQ +D++ + T R + + + + Q + + Sbjct: 136 KIEYRILTSDDRIAALQESMVDVVVKTMTITCERREKVDFSTQ--YFSAEQRIQVLQGSS 193 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 + + L+G +C GTT+ + + P+ + + + DA + Sbjct: 194 VRGIDDLAGKRVCAARGTTSATRIQQLQPEATVVTVPM----WSDCLVVLQQGQVDAIST 249 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 D + L L + +++ + P + + + + V+ T + + Sbjct: 250 DDTILAGLASQDP---YLMMVGGSLGVEPYGIGVNKDNPDLVRFVNGTLDRIRSDGTWNR 306 Query: 257 TQKNINQVSKDTTNP 271 V + P Sbjct: 307 IYDRWLSVLGPSPGP 321 >gi|325978782|ref|YP_004288498.1| putative glutamine transport system substrate-binding protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325178710|emb|CBZ48754.1| putative glutamine transport system substrate-binding protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 270 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 59/279 (21%), Positives = 112/279 (40%), Gaps = 19/279 (6%) Query: 1 MYKDF--------FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 M K + +L L T + + + I+ G LK G+ + F A Sbjct: 1 MKKKLGLAILASLSLILLTLFAGKTTFADSVSEQVKKIQDAGVLKVGVKQDVPNFGYYSA 60 Query: 53 -NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G ++G +VD + ++ + K+ + + A+ R L + QIDIL T R+ Sbjct: 61 ETGKYEGMEVDLAKKIAKKLG---VKVSFTAVTAQTREALLDNGQIDILIATYTITEERQ 117 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 S A Y+D GF+++K KG S++ L G +I V G+TT+ + +Y +AHN+ + Sbjct: 118 AS--YAISDPYYYDEIGFLVNKSKGYDSIADLDGLTIGVAQGSTTKSAIEEYGEAHNLSF 175 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + + E+ + A+R A++ D S L + I+ + + A Sbjct: 176 NFVQLGSYPELAISLYANRISAFSVDKSILTGYVSK-----KTEIIDEGFNTQEYGIAAT 230 Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 + + + ++ T L + + Sbjct: 231 KSNQSVIDYINDLLADWKTDGSLQKLYDKYDLTPATADD 269 >gi|194288892|ref|YP_002004799.1| glutamate/aspartate ABC transporterperiplasmic binding component [Cupriavidus taiwanensis LMG 19424] gi|193222727|emb|CAQ68730.1| glutamate/aspartate ABC transporter,periplasmic binding component [Cupriavidus taiwanensis LMG 19424] Length = 303 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 41/258 (15%), Positives = 87/258 (33%), Gaps = 10/258 (3%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS- 76 + + L IK G + G + F+ + G+ + + + + Sbjct: 26 AVHAADGDTLKKIKDSGVISLGYRESSIPFSYTDGK-EVMGYSHEILLQIVDKVKSELKM 84 Query: 77 ---KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 +++ P+ ++ R +Q+ IDI +T L R+ + + + G + K Sbjct: 85 PNLQVRLTPITSQNRIPLVQNGTIDIECGSTTNNLERQKQVAFSNS--LFVYGIKMLTKK 142 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 G+ + L ++ AGTT E L M + I + + R A Sbjct: 143 DSGVKEFADLKDRNVVTTAGTTGERLLVKMNGEKAMNMNLISTKDHGQSFLILETGRAAA 202 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 + D LY + ++ V++ + A + D + + + T+ Sbjct: 203 FVMDEPLLYGERTKAKNAADWVVVGAPLQTENYACMFRKDDPSFKKLADGVIADLQTS-- 260 Query: 254 LGITQKNINQVSKDTTNP 271 G +K N+ P Sbjct: 261 -GRAEKLYNKWFMAPIPP 277 >gi|116696426|ref|YP_842002.1| ABC transporter periplasmic protein [Ralstonia eutropha H16] gi|113530925|emb|CAJ97272.1| ABC-type transporter, periplasmic component: PAAT family [Ralstonia eutropha H16] Length = 274 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 55/276 (19%), Positives = 100/276 (36%), Gaps = 15/276 (5%) Query: 2 YKDFFV-SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59 ++ F + + + S + A L DI+K G L G+ F V G Sbjct: 3 FRSFLLRGAIVAGVAVMASGTALADRLDDIRKAGVLHVGVFDANPPFGFVDPKTHAPAGL 62 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD+ ++S + K ++ N R L S+++DI++ N T R +G Sbjct: 63 DVDYANEIASRLG---VKAEFRATNPANRIPLLASQKVDIVAANFTITDERRQQIGF--S 117 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G FI K + +L + V GTT E TL + I ++ Sbjct: 118 TPYFASGLQFIARKGA-LRQPDELKAWRLGVDKGTTQETTLRQRYPDA----RVIAYDDS 172 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 A R A+ D + L AL T + I P +++ + + +G+ Sbjct: 173 PLALQALRTGAIQAFAQDGAKLGALLATLPNRDQFEISPFTLTREYMGVGVPKGEERLQA 232 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 + + E+ G + ++ + + R Sbjct: 233 AIDQIL---LELEKSGTAARIYDKYFGPKSQAPLAR 265 >gi|172037710|ref|YP_001804211.1| extracellular solute-binding protein [Cyanothece sp. ATCC 51142] gi|171699164|gb|ACB52145.1| extracellular solute-binding protein, family 3 [Cyanothece sp. ATCC 51142] Length = 300 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 57/287 (19%), Positives = 112/287 (39%), Gaps = 21/287 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K F + L L+++ + + A IL IK+ G + G + FA V G+W G+ Sbjct: 2 MKKKFVLLALTLLLMATSQSPSWAGEILEKIKQTGVITAGTRKDAIPFAYVNEEGEWVGY 61 Query: 60 DVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +D + I P +++ + + + RF +++++IDI ++ +T R+ + Sbjct: 62 SIDVLEIIRQDIEKKLGKPIQLKLVEVTPQNRFDKVKNREIDIECASSTFTWERDEVVDF 121 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + + G K + ++ L+G I V TT E + A + Sbjct: 122 SVS--YFASGTKIFRKKGSDLGTIDSLAGRRIGVIPNTTNEQAIKLQQPAAI----LVPI 175 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDT 235 + E +A GD L L+L N + ++P+ A I + ++ Sbjct: 176 KDRTEGLEKLNNGEIEAIAGDGIVLQGLRLENGNADKFEVVPEFPYMYEAYACMIPEDES 235 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKS 282 W +V+++ + GI QV +R+ G + Sbjct: 236 AWRGMVNYSLVKFME----GIISDQPQQVEI------YERWFGEETG 272 >gi|13324646|gb|AAK18828.1|AF327739_5 Peb1 [Streptococcus thermophilus] Length = 277 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 61/276 (22%), Positives = 112/276 (40%), Gaps = 23/276 (8%) Query: 7 VSILCLIILFFTSFSTNAS---------ILGDIKKRGFLKCGINTGLVGFAEVKAN-GDW 56 VS++ + T+ T A + I RG L G+ + F A + Sbjct: 13 VSLVIATVFLITNHKTEAEDTSKLLDSKTVQKIVNRGTLNVGVKQDVPNFGYYSAKTNRY 72 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +G +VD + ++ + K+ Y+P+ + R + + ID+L R+ S Sbjct: 73 EGMEVDLAKKIADELR---VKVNYIPVTTQTREPLMDNGTIDLLIGTYTINDERKAS--Y 127 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 A Y D GF++ K GI+ +S L+G +I V G +T+ L +Y AHN+K++ + Sbjct: 128 AISNPYYRDQIGFLVLKDSGINKISDLNGKTIGVAQGASTKAALQEYSSAHNLKFNYVQL 187 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E+ + AHR DA++ D S L + IL + A + + E Sbjct: 188 GSYPELAVSLYAHRVDAFSVDKSILSGY-----ESKKTKILNEGFKTQDYGIASSKSNQE 242 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272 + + ++ G QK ++ + + Sbjct: 243 LIDYTNDLIAKW---QKDGSLQKLYDKYNLKPAKAE 275 >gi|104773439|ref|YP_618419.1| amino acid ABC transporter substrate-binding protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103422520|emb|CAI97094.1| Amino acid ABC transporter, substrate binding protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 286 Score = 187 bits (475), Expect = 3e-45, Method: Composition-based stats. Identities = 65/288 (22%), Positives = 116/288 (40%), Gaps = 30/288 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI----------LGDIKKRGFLKCGINTGLVGFAEV 50 M + ++ FT + N+ + +IK+RG+++ + L + V Sbjct: 11 MGIVALIVVVSAAYFGFTQPNLNSGTAGSRWSNENGVSEIKRRGYIRVAVFGDLPPYGWV 70 Query: 51 KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 G G+DV R ++ + KI+++ +NA R L S + DI+ N T R Sbjct: 71 NEQGKRVGYDVYLARRIAKDL---NVKIRFIQVNANNRVDTLNSNKADIVLANFTVTPER 127 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 + + A G I K I+S +L G + V GTT E +YF A Sbjct: 128 KDVVDFA--KPYMKVSVGVISPKNAPINSAQKLKGKKLIVTKGTTAE----NYF-AKQSG 180 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 + + F+ + A + R A D S LYA P V + I + +APA+ Sbjct: 181 VNLLKFDSKTQQFNALKNGRGAALADDNSYLYAWVK--KNPKYVVGIKSIGPRQYVAPAV 238 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ-----VSKDTTNPDV 273 +G+ +++ WT++ + + G ++ + KD D+ Sbjct: 239 KKGN---RSLLKWTNHEITKLTKEGFFVQDYQKELAPYFGKDIKPTDI 283 >gi|269219728|ref|ZP_06163582.1| CjaA protein [Actinomyces sp. oral taxon 848 str. F0332] gi|269210970|gb|EEZ77310.1| CjaA protein [Actinomyces sp. oral taxon 848 str. F0332] Length = 400 Score = 187 bits (475), Expect = 3e-45, Method: Composition-based stats. Identities = 57/272 (20%), Positives = 108/272 (39%), Gaps = 20/272 (7%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 A IK G ++ G+ F ++G G+DV++ + ++ + K++ +P+ Sbjct: 109 ARTPEQIKAAGTVRIGVFGDKAPFGYTDSDGTNVGYDVEYAKRIAKDLG---VKLELVPV 165 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 A R L S ++D++ N T R + A G + K I+S SQL Sbjct: 166 VADSRVEYLTSGKVDVILANFTVTPERAEKVDFA--KPYMKVSLGAVSRKDAPITSESQL 223 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 SG I V GTT + Y +A + + P +++ ++ A R D + D + A Sbjct: 224 SGKKILVVKGTTADS----YIQAKHPDWKPAKYDQYSDVYNALADGRGDVWVTDNTEALA 279 Query: 204 LKLTNDRPSEHV-ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI----TQ 258 + + V + + +A A+ +G+ +W + + T + + Sbjct: 280 FSRQGENKDKFVTGITQLGPVDTIAGAVQKGNAPLR---NWLNKELETLGKEKFFHKAYE 336 Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALG 290 K + V D+ PD L ++ G G Sbjct: 337 KTLAPVYGDSAKPDE---LVVEGGEVDGAGKG 365 >gi|218678693|ref|ZP_03526590.1| putative substrate-binding component of ABC transporter [Rhizobium etli CIAT 894] Length = 277 Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats. Identities = 58/256 (22%), Positives = 100/256 (39%), Gaps = 6/256 (2%) Query: 1 MYKDFFVSILCLI--ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M F ++ LI L T S L ++ RG L G + + A+ +G Sbjct: 1 MTISFRTGVMSLITAALLSTPALAEGSKLDEVLARGHLVLGTGSTNAPWHFKSADDKLQG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD ++ A+F DP KI+Y+ ++ R + + ++DI + T R + +AF Sbjct: 61 FDVDMGHIIAKALFGDPEKIEYVNQSSDARIPNITTDKVDITCQFMTVTGER--AQQVAF 118 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y +G G ++ + + L A V + A + +E Sbjct: 119 TIPYYREGVGLMLKADGKYADYAALKAAGSSVTISVLQNVYAETMVHAALPEATVDQYES 178 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 V+ I A + R DA D S+L P + + A A+ +GD +W Sbjct: 179 VDLIYQALESGRADAVATDQSSLAWYMTQ--NPGRYKDAGYGWNPQTYACAVKRGDQDWL 236 Query: 239 NIVSWTHYAMVTAEEL 254 N V+ + +T + Sbjct: 237 NFVNTALHEAMTGVKF 252 >gi|171780123|ref|ZP_02921027.1| hypothetical protein STRINF_01911 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281471|gb|EDT46906.1| hypothetical protein STRINF_01911 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 272 Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats. Identities = 59/279 (21%), Positives = 113/279 (40%), Gaps = 19/279 (6%) Query: 1 MYKDF----FVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVKA 52 M K S+ +++ FT +T A + I+ G LK G+ + F A Sbjct: 3 MKKKLGLAILASLSLILLTLFTGKTTFADSVSEQVKKIQDAGVLKVGVKQDVPNFGYYSA 62 Query: 53 -NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G ++G +VD + ++ + K+ + + + R L + QIDIL T R+ Sbjct: 63 ETGKYEGMEVDLAKKIAKKLG---VKVSFTAVTPQTREALLDNGQIDILIATYTITEERQ 119 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 S A Y+D GF+++K KG S++ L G +I V G+TT+ + +Y +AHN+ + Sbjct: 120 AS--YAISDPYYYDEIGFLVNKSKGYDSIADLDGLTIGVAQGSTTKSAIEEYGEAHNLSF 177 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + + E+ + A+R A++ D S L + I+ + + A Sbjct: 178 NFVQLGSYPELAISLYANRISAFSVDKSILTGYVSK-----KTEIIDEGFNTQEYGIAAT 232 Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 + + + ++ L + + Sbjct: 233 KSNQSVIDYINDLLADWKADGSLQKLYDKYDLTPATADD 271 >gi|238759568|ref|ZP_04620730.1| Extracellular solute-binding protein, family 3 [Yersinia aldovae ATCC 35236] gi|238702227|gb|EEP94782.1| Extracellular solute-binding protein, family 3 [Yersinia aldovae ATCC 35236] Length = 284 Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats. Identities = 58/255 (22%), Positives = 98/255 (38%), Gaps = 16/255 (6%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSK 77 S + +A L DIK+ G ++ + F + G+DVD A++ + K Sbjct: 24 SGAAHADKLDDIKQAGVVRIAVFDSNPPFGYIDPQTKKLVGYDVDIANAIAQDLG---VK 80 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++ N R L SK++D+++ N T R + + + GQ FI HK + Sbjct: 81 VELRATNPANRIPLLISKKVDLIAANFTITDDRAKEVNFSL--PYFATGQKFIAHKG-VL 137 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + + I GT E+TL +++ I ++ A R A T D Sbjct: 138 KTPEDIGKLRIGADKGTVQEITLREHYPTA----KVISYDDTPVAFTALRNGNVQAITQD 193 Query: 198 ISALYALKLTND--RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + L L + ++ I P I+K I +G+ V+ T V E+ G Sbjct: 194 DAKLVGLLGNLPAAQKADFEISPFSITKEYQGVGIPKGEDRLTTQVNETL---VKLEKDG 250 Query: 256 ITQKNINQVSKDTTN 270 K N+ TN Sbjct: 251 EAAKIYNRWFGPETN 265 >gi|241630654|ref|XP_002408387.1| cystine-binding periplasmic protein, putative [Ixodes scapularis] gi|215501179|gb|EEC10673.1| cystine-binding periplasmic protein, putative [Ixodes scapularis] Length = 249 Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats. Identities = 63/261 (24%), Positives = 94/261 (36%), Gaps = 14/261 (5%) Query: 11 CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSS 69 + L + A L DIKK G LK F V G DVDF +AL+ Sbjct: 1 ATLTLALVAGVAQADRLDDIKKTGVLKVASFDSNPPFGFVDQKSRQITGLDVDFAQALAD 60 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 + K++ LP N R L S ++D++ N T R + + I YF Sbjct: 61 KLG---VKLEVLPTNPANRVPLLTSNKVDLVLANFTITEERAKQVDFS---IPYFASGQQ 114 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 + KK +SS QL+ I V GT E+ L + + + ++ A R Sbjct: 115 FLAKKGVLSSPEQLNSLRIGVDKGTVNEIVLREKYPQA----KLVAYDDTPFAFTALRNG 170 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 A T D L L + I IS+ + I +G+T + V T + Sbjct: 171 NVQAITQDGPKLIGLLANVPDKENYEIPAFSISEDLIGIGIPKGETALKSFVDETL---L 227 Query: 250 TAEELGITQKNINQVSKDTTN 270 E G Q + + Sbjct: 228 ELETQGKAQAIYDVWFGPQSK 248 >gi|154148477|ref|YP_001406034.1| antigenic protein [Campylobacter hominis ATCC BAA-381] gi|153804486|gb|ABS51493.1| antigenic protein [Campylobacter hominis ATCC BAA-381] Length = 266 Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats. Identities = 60/255 (23%), Positives = 110/255 (43%), Gaps = 7/255 (2%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 + S S L +IK+ +K G+ L F+ +G+++GF++ +A+ ++I Sbjct: 1 MLICSCFAFGSTLEEIKQSKVIKIGVRLNLPPFSNQNEHGEFEGFEISLAKAIGASILGK 60 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 +IQ + LNAK+R LQ+ +D++ N T R S+ A + QG + K Sbjct: 61 NGEIQLVGLNAKDRIPYLQNGTVDLILANFSKTEERAKSVDFA--TPYLSNTQGILTKKS 118 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 + I S+SQL+G I GTTT+ L A + P+ + V + + + D Y Sbjct: 119 ENIRSISQLAGKKILFIKGTTTDDYLKAN--AAKLGITPVECQSVNKCFQSLQKGEADGY 176 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 + L+L +D + + +I S + P + +G+ V+ + Y + + Sbjct: 177 MHTSILIAFLQLLDDNIE--MGIQNIGSIEFICPGVKKGNEALLEAVNASIYNLSKSNFF 234 Query: 255 G-ITQKNINQVSKDT 268 K T Sbjct: 235 KDAYNNTFEPFYKGT 249 >gi|226304964|ref|YP_002764922.1| ABC transporter substrate-binding protein [Rhodococcus erythropolis PR4] gi|226184079|dbj|BAH32183.1| putative ABC transporter substrate-binding protein [Rhodococcus erythropolis PR4] Length = 334 Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats. Identities = 48/255 (18%), Positives = 96/255 (37%), Gaps = 10/255 (3%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPS 76 S L I+ RG L G++TG + A G +GFDVD R ++ + DP Sbjct: 82 ASPQPPTPSLDAIRARGRLIVGLDTGSNLMSFRDPATGRLEGFDVDIAREIARDLLGDPE 141 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 KI+Y L + +R ALQ +D++ + T R + + + + Q + + Sbjct: 142 KIEYRILTSDDRIAALQESMVDVVVKTMTITCERREKVDFSTQ--YFSAEQRIQVLQGSP 199 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 + ++ L+G +C GTT+ + + + P+ + + + DA + Sbjct: 200 VRGIADLAGKRVCAARGTTSATRIQELQPEATVVTVPM----WSDCLVVLQQGQVDAIST 255 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 D + L L + +++ + P + + + + V+ T + Sbjct: 256 DDTILAGLASQDP---YLMMVGGSLGVEPYGIGVNKDNPDLVRFVNGTLERIRGDGTWNR 312 Query: 257 TQKNINQVSKDTTNP 271 V + P Sbjct: 313 IYDRWLSVLGPSPGP 327 >gi|288905749|ref|YP_003430971.1| ABC transporter, amino acid binding protein [Streptococcus gallolyticus UCN34] gi|306831847|ref|ZP_07465003.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|288732475|emb|CBI14047.1| Putative ABC transporter, amino acid binding protein [Streptococcus gallolyticus UCN34] gi|304426045|gb|EFM29161.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 272 Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats. Identities = 58/279 (20%), Positives = 111/279 (39%), Gaps = 19/279 (6%) Query: 1 MYKDF--------FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 M K + +L L T + + + I+ G LK G+ + F A Sbjct: 3 MKKKLGLAILASLSLILLTLFAGKTTFADSVSEQVKKIQDAGVLKVGVKQDVPNFGYYSA 62 Query: 53 -NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G ++G +VD + ++ + K+ + + A+ R L + QIDIL T R+ Sbjct: 63 ETGKYEGMEVDLAKKIAKKLG---VKVSFTAVTAQTREALLDNGQIDILIATYTITEERQ 119 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 S A Y+D GF+++K KG S++ L G +I V G+TT+ + +Y +AHN+ + Sbjct: 120 AS--YAISDPYYYDEIGFLVNKSKGYDSIADLDGLTIGVAQGSTTKSAIEEYGEAHNLSF 177 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + + E+ + A+R A++ D S L + I+ + + A Sbjct: 178 NFVQLGSYPELAISLYANRISAFSVDKSILTGYVSK-----KTEIIDEGFNTQEYGIAAT 232 Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 + + + ++ L + + Sbjct: 233 KSNQSVIDYINDLLADWKADGSLQKLYDKYDLTPATADD 271 >gi|170720286|ref|YP_001747974.1| extracellular solute-binding protein [Pseudomonas putida W619] gi|169758289|gb|ACA71605.1| extracellular solute-binding protein family 3 [Pseudomonas putida W619] Length = 305 Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats. Identities = 46/253 (18%), Positives = 92/253 (36%), Gaps = 11/253 (4%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPSKIQYL 81 L IK+ G + G + F+ + + G+ D A+ A+ K++Y Sbjct: 28 GTLKKIKESGTITLGHRDSSIPFSYLAGKPEPVGYSHDIQLAVVEALKKQLGTDIKVRYN 87 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG---IS 138 + ++ R +Q+ +D+ +T + R+ + + + G + K G Sbjct: 88 LVTSQTRIPLVQNGTVDLECGSTTNNVERQQQVAFSVGI--FEVGTRLLTKVKDGQPSYK 145 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + L G ++ AGTT+E L MK + I + E + R A+ D Sbjct: 146 DFTDLGGKNVVTTAGTTSERILKAMNADKQMKMNVISAKDHGEAFNMLESGRAVAFMMDD 205 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 + L +P++ VI S + +GD + V + E+ Sbjct: 206 ALLAGEMAKARKPADWVITGTPQSYEIYGCMMRKGDDTFKKAVDDAIVGYFKSGEVN--- 262 Query: 259 KNINQVSKDTTNP 271 K+ ++ + P Sbjct: 263 KSYDKWFQQPIPP 275 >gi|225858524|ref|YP_002740034.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain protein [Streptococcus pneumoniae 70585] gi|225721173|gb|ACO17027.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain protein [Streptococcus pneumoniae 70585] Length = 286 Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats. Identities = 56/287 (19%), Positives = 111/287 (38%), Gaps = 26/287 (9%) Query: 1 MYKDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTGLVG 46 ++K + L F + + A + + KK G L+ + Sbjct: 3 LFKPLLTVLALAFALIFITACSSGGNAGPSSGKTTAKARTIDENKKSGELRIAVFGDKKP 62 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F V +G ++G+D++ L+ + K++Y+ ++A R L S ++DI N Sbjct: 63 FDYVDNDGSYQGYDIELGNQLAQDLG---VKVKYISVDAANRAEYLISNKVDITLANFTV 119 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T R+ + A G + K I+ V QL G ++ V GTT E YF+ Sbjct: 120 TDERKKQVDFAL--PYMKVSLGVVSPKTGLITDVKQLEGKTLIVTKGTTAET----YFEK 173 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 ++ + +++ + A R DA++ D + + A L N V + + + Sbjct: 174 NHPEIKLQKYDQYSDSYQALLDGRGDAFSTDNTEVLAWALENK--GFEVGITSLGDPDTI 231 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSKDTTNPD 272 A A+ +G+ E + ++ + +K ++ D D Sbjct: 232 AAAVQKGNQELLDFINKDIEKLGKENFFHKAYEKTLHPTYGDAAKAD 278 >gi|116629190|ref|YP_814362.1| amino acid ABC transporter periplasmic protein [Lactobacillus gasseri ATCC 33323] gi|238853883|ref|ZP_04644246.1| glutamine-binding protein [Lactobacillus gasseri 202-4] gi|311111032|ref|ZP_07712429.1| glutamine-binding protein [Lactobacillus gasseri MV-22] gi|116094772|gb|ABJ59924.1| amino acid ABC transporter substrate-binding protein, PAAT family [Lactobacillus gasseri ATCC 33323] gi|238833469|gb|EEQ25743.1| glutamine-binding protein [Lactobacillus gasseri 202-4] gi|311066186|gb|EFQ46526.1| glutamine-binding protein [Lactobacillus gasseri MV-22] Length = 273 Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats. Identities = 43/279 (15%), Positives = 101/279 (36%), Gaps = 17/279 (6%) Query: 1 MYKDF----FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55 M + ++L + L ++ ++K+ + G+ F + G Sbjct: 1 MKRKLRIFSLFTVLLSVFLLSACRKNTRNVYQEVKRSNEITWGVKADTRLFGLMSIKTGK 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +GF+VD AL+ + +K ++ AK + L++ ID + T R+ + Sbjct: 61 IEGFEVDLANALTKEMLGKDAKANFVQTTAKTKIPLLKNGNIDAVLAAMTITPERKKQID 120 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + ++ GQ ++ + I +V L+G + GTT + + + Sbjct: 121 FSE--PYFYAGQSLLVKEDSTIKNVQDLNGKTALAVKGTTAVANVKKFAPKA----KVLE 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F+ + A +A + A T D L + N + ++ + P A+ +G Sbjct: 175 FDDYGQAFTALKAGQGQAMTTDNGLLAGIATENKG---YKLVGGTYTNEPYGIAVNKGQK 231 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 + N ++ ++ G + + +++ Sbjct: 232 QMKNAINRALN---KLKKDGTYNALVKKWFSGIPGFNIK 267 >gi|257869447|ref|ZP_05649100.1| extracellular solute-binding protein [Enterococcus gallinarum EG2] gi|257803611|gb|EEV32433.1| extracellular solute-binding protein [Enterococcus gallinarum EG2] Length = 269 Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats. Identities = 49/274 (17%), Positives = 99/274 (36%), Gaps = 19/274 (6%) Query: 1 MYKDFFVSILCLIILFFTSF-----STNASILGDIKKRGFLKCGINTGLVGFAEVK-ANG 54 M K +L + L S + +L K+ + G+ F + A Sbjct: 1 MSKKISTVLLLVFALMTFSACKGQSAAERDVLASSKESNQIIWGVKNDTRLFGLMDIATA 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + +GFD+D +A++ I ++ + +K R L++ ID + T R+ + Sbjct: 61 EVRGFDIDIAKAITEHILGRDGSAIFVEVTSKTRIPLLKNGNIDAIIATMTITDERKKQV 120 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYHP 173 + + GQ ++ K I + L+ ++ V G+T+ + + Sbjct: 121 DF--SDVYFDAGQSLLVAKDSPIQGIEDLNANTTVLVVKGSTSAINIRKAAPEA----KI 174 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + E E A ++ + DA T D + L + N + ++ + P AI +G Sbjct: 175 LELENYAEAFTALQSGQGDAMTTDNAILLGMASENPN---YHLVGGTFTNEPYGIAIDKG 231 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 + V+ M E G + + D Sbjct: 232 QEPFLKAVNQALKEMH---EDGTYDEIYQKWFPD 262 >gi|291456584|ref|ZP_06595974.1| CjaA protein [Bifidobacterium breve DSM 20213] gi|291381861|gb|EFE89379.1| CjaA protein [Bifidobacterium breve DSM 20213] Length = 282 Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats. Identities = 58/260 (22%), Positives = 99/260 (38%), Gaps = 14/260 (5%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 S S + IKK G ++ L + VK +G G+DV + + Sbjct: 30 AAGGSSSQQGQTVEQIKKTGKIRIATFGDLPPYGYVKNDGTRAGYDVALGNQIGKDLG-- 87 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 K+ ++ +NA R +L+S ++D++ N T R+ + A G + Sbjct: 88 -VKVDWVQVNADGRVDSLKSDKVDLVLANFTVTDERKQVVDFAD--PYMKVSIGVVSPDS 144 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I+S QL G + V GTT E +F F+ + A++ R A Sbjct: 145 AKITSADQLKGKQLAVTKGTTAEA----FFTEKYPDVQLRKFDSKTQQFQAFKDGRVAAL 200 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D + LYA D P V + I +S +APA+ +G+ WT+ + T Sbjct: 201 ADDNTYLYAWAK--DNPGYTVGIKTIGDESTIAPAVKKGNKSLLE---WTNKEIKTLTSN 255 Query: 255 GITQKNINQVSKDTTNPDVQ 274 G + + D++ Sbjct: 256 GFFKDVYQSELAPSFTSDIK 275 >gi|220926542|ref|YP_002501844.1| family 3 extracellular solute-binding protein [Methylobacterium nodulans ORS 2060] gi|219951149|gb|ACL61541.1| extracellular solute-binding protein family 3 [Methylobacterium nodulans ORS 2060] Length = 305 Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats. Identities = 42/278 (15%), Positives = 94/278 (33%), Gaps = 15/278 (5%) Query: 4 DFFVSILCLIILFFTSFSTNAS-----ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 F IL + + + + + L IK + G+ G F+ + + + G Sbjct: 2 RIFGMILAMALAMPVAAAPTGAGELTGTLKKIKDSNRIVLGVRDGGPPFSYIDNDQKYVG 61 Query: 59 FDVDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + +D C + AI + + +++ P+ + R + + ID+ +T R+ + Sbjct: 62 YTIDICDKIIDAIKKEINAPTLQVEMNPVTSSTRIPLMTNGTIDLECGSTTNNPERQKQV 121 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + F K + I+ + L G ++ AG+T + + + Sbjct: 122 TFTNA--HFVTTSRFASKKAQNINKIDDLKGKTVVSVAGSTNLVQINKVNSERKLGLTIQ 179 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS-KSPLAPAIIQG 233 + E R A+ D L L + P+ + I D + P + + Sbjct: 180 AAKDTVEAFLLLETDRAAAFVMDDVQLSILIALSKDPAAYTISEDAFALPEPYGIMLRRN 239 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 D + +V + + E+ + + P Sbjct: 240 DEPFKAVVDRATADLYRSPEI---AAIYKKWFESPVPP 274 >gi|227329657|ref|ZP_03833681.1| extracellular solute-binding protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 280 Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats. Identities = 57/248 (22%), Positives = 93/248 (37%), Gaps = 14/248 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59 M K ++ L L S + A L DI+K G +K + F V G+ Sbjct: 1 MKKQIL-TVTLLAGLASVSGAAQADKLDDIQKAGVVKIAVFDSNPPFGYVDPQSKKLVGY 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD A+ A+ K++ N R L S+++D+++ N T R + + Sbjct: 60 DVDIAEAIGKALG---VKVELRATNPANRIPLLSSQKVDLIAANFTITDERAKQVNFSI- 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ FI K + + + I GT E+TL +++ I ++ Sbjct: 116 -PYFATGQKFIARKG-VLKTPEDIKTLRIGADKGTVQEITLREHYPTA----KVISYDDT 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEW 237 AA R A T D + L L +E I P I+K I +G+ Sbjct: 170 PLAFAALRNGNVQAITQDDAKLVGLLANVPDAQKAEFEISPFSITKEYQGVGIPKGEERL 229 Query: 238 YNIVSWTH 245 ++ T Sbjct: 230 TAKINDTL 237 >gi|54027317|ref|YP_121559.1| putative transporter substrate-binding protein [Nocardia farcinica IFM 10152] gi|54018825|dbj|BAD60195.1| putative transporter substrate-binding protein [Nocardia farcinica IFM 10152] Length = 323 Score = 186 bits (473), Expect = 3e-45, Method: Composition-based stats. Identities = 48/228 (21%), Positives = 91/228 (39%), Gaps = 10/228 (4%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSK 77 + +T L I++RG L G++TG F+ G GFD D R ++ + P Sbjct: 72 TGATTGPTLDAIRRRGRLLVGLDTGSNLFSFRDPITGAVVGFDADIAREIARDLLGSPDL 131 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 I++ + + +R ALQ + +D++++ T R + + Q + K GI Sbjct: 132 IEFRSMGSADREQALQDRTVDLVAKTMTITCERRRKVAF--STVYLRADQRVLAMKDSGI 189 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 ++ L+G +CV GTT+ + A + + + + DA + D Sbjct: 190 RGLADLAGKRVCVVRGTTSLEHVRREQPAA----TVLTVPSWADCLVVLQQRQVDAVSTD 245 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + L L + ++ + IS P I + + V+ T Sbjct: 246 DAILAGLAAQDP---YTEVVGESISVEPYGIGIPREADDLVRFVNRTL 290 >gi|313123646|ref|YP_004033905.1| amino acid ABC transporter substrate-binding protein [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280209|gb|ADQ60928.1| Amino acid ABC transporter substrate-binding protein [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 286 Score = 186 bits (473), Expect = 4e-45, Method: Composition-based stats. Identities = 65/288 (22%), Positives = 116/288 (40%), Gaps = 30/288 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI----------LGDIKKRGFLKCGINTGLVGFAEV 50 M + ++ FT + N+ + +IK+RG+++ + L + V Sbjct: 11 MGIVALIVVVSAAYFGFTQPNLNSGTAGSRWSNENGVSEIKRRGYIRVAVFGDLPPYGWV 70 Query: 51 KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 G G+DV R ++ + KI+++ +NA R L S + DI+ N T R Sbjct: 71 NDQGKRVGYDVYLVRRIAKDL---NVKIRFIQVNANNRVDTLNSNKADIVLANFTVTPER 127 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 + + A G I K I+S +L G + V GTT E +YF A Sbjct: 128 KDVVDFA--KPYMKVSVGVISPKNAPINSAQELKGKKLIVTKGTTAE----NYF-AKQSG 180 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 + + F+ + A + R A D S LYA P V + I + +APA+ Sbjct: 181 VNLLKFDSKTQQFNALKNGRGAALADDNSYLYAWVK--KNPKYVVGIKSIGPRQYVAPAV 238 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ-----VSKDTTNPDV 273 +G+ +++ WT++ + + G ++ + KD D+ Sbjct: 239 KKGN---RSLLKWTNHEITKLTKEGFFVQDYQKELAPYFGKDIKPTDI 283 >gi|325970438|ref|YP_004246629.1| ABC transporter periplasmic protein [Spirochaeta sp. Buddy] gi|324025676|gb|ADY12435.1| ABC-type transporter, periplasmic subunit family 3 [Spirochaeta sp. Buddy] Length = 265 Score = 186 bits (473), Expect = 4e-45, Method: Composition-based stats. Identities = 55/234 (23%), Positives = 96/234 (41%), Gaps = 8/234 (3%) Query: 13 IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAI 71 + T S + L +K +G+L G + F N G+ +GF++D +A++ I Sbjct: 20 LFAAGTKESAVSDPLAALKAKGYLSVGCKVDVPSFGYKNINTGEIEGFEIDLAKAVAKRI 79 Query: 72 FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131 F D + I+ P+ AK R L + ++D+++ T R S I Y D ++ Sbjct: 80 FGDENAIKLTPVTAKTRGPLLDTGELDMVAATFTVTEERRKSWDF--STIYYVDAVAVMV 137 Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191 K + S L+G +I V TT+ +L + F EI A + R Sbjct: 138 KKASPYAVFSDLAGKTIGVAQSATTKKSLEAGAAEAGITLKFNEFATYPEIKVALDSGRV 197 Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 DA++ D + L +L + +K A+ +G+T V+ T Sbjct: 198 DAFSVDFAILNGYM-----EDSTKLLTERFAKQDYGIAVKKGNTALLEAVNATI 246 >gi|256618703|ref|ZP_05475549.1| extracellular solute-binding protein [Enterococcus faecalis ATCC 4200] gi|256598230|gb|EEU17406.1| extracellular solute-binding protein [Enterococcus faecalis ATCC 4200] Length = 275 Score = 186 bits (473), Expect = 4e-45, Method: Composition-based stats. Identities = 55/282 (19%), Positives = 101/282 (35%), Gaps = 27/282 (9%) Query: 1 MYKD----FFVSILCLIILFFTSFSTNAS------------ILGDIKKRGFLKCGINTGL 44 M K +S+L L + S N + +KK G +K G+ + Sbjct: 1 MKKQNKWLAGLSLLVLAGIIVGCGSGNNDSTSKSASSNKTVTVEQLKKAGKIKVGVKEDI 60 Query: 45 VGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103 F + + +G + D R + I ++++ + AK R L + ++D++ Sbjct: 61 PNFGYMNPDTNKNEGMEPDIARLIVKEITGSEENVEFVGVTAKTRGPLLDNGELDMVIAT 120 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163 T R+ + Y D GF++ K+ SS+ L G +I V TT+ L Sbjct: 121 FTITDERKKTYNF--TTPYYTDEIGFLVRKEDNFSSMKDLDGKTIGVAQSATTKENLEKK 178 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 + +K+ E+ A + R DA++ D S L + I D S Sbjct: 179 AQEEGIKFTYQELGSYPELKTALTSKRIDAFSVDKSILSGYV-----DGKTEISKDGFSP 233 Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 + +TE + ++ E+ G +K Sbjct: 234 QEYGITTKKANTELNDYLNGLIEKW---EKDGTLEKIYQDWG 272 >gi|116627888|ref|YP_820507.1| amino acid ABC transporter periplasmic protein [Streptococcus thermophilus LMD-9] gi|116101165|gb|ABJ66311.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus thermophilus LMD-9] Length = 277 Score = 186 bits (473), Expect = 4e-45, Method: Composition-based stats. Identities = 61/276 (22%), Positives = 111/276 (40%), Gaps = 23/276 (8%) Query: 7 VSILCLIILFFTSFSTNAS---------ILGDIKKRGFLKCGINTGLVGFAEVKAN-GDW 56 VS++ + T T A + I RG L G+ + F A + Sbjct: 13 VSLVIATVFLITIHKTEAEDTSKLLDSKAVQKIVNRGTLNVGVKQDVPNFGYYSAKTNRY 72 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +G +VD + ++ + K+ Y+P+ + R + + ID+L R+ S Sbjct: 73 EGMEVDLAKKIADEL---KVKVNYIPVTTQTREPLMDNGTIDLLIGTYTINDERKAS--Y 127 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 A Y D GF++ K GI+ +S L+G +I V G +T+ L +Y AHN+K++ + Sbjct: 128 AISNPYYHDQIGFLVLKDSGINKISDLNGKTIGVAQGASTKAALQEYASAHNLKFNYVQL 187 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E+ + AHR DA++ D S L + IL + A + + E Sbjct: 188 GSYPELAVSLYAHRVDAFSVDKSILSGY-----ESKKTKILNEGFKTQDYGIASSKSNQE 242 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272 + + ++ G QK ++ + + Sbjct: 243 LIDYTNDLIAKW---QKDGSLQKLYDKYNLKPAKAE 275 >gi|238787850|ref|ZP_04631647.1| Extracellular solute-binding protein, family 3 [Yersinia frederiksenii ATCC 33641] gi|238724193|gb|EEQ15836.1| Extracellular solute-binding protein, family 3 [Yersinia frederiksenii ATCC 33641] Length = 284 Score = 186 bits (473), Expect = 4e-45, Method: Composition-based stats. Identities = 57/260 (21%), Positives = 98/260 (37%), Gaps = 16/260 (6%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSK 77 S + +A L DIK+ G ++ + F + G+DVD A++ + K Sbjct: 24 SGAVHADKLDDIKQAGVVRIAVFDSNPPFGYIDPQSKKLVGYDVDVANAIAKDLG---VK 80 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++ N R L +K++D+++ N T R + + + GQ FI HK + Sbjct: 81 VELRATNPANRIPLLTAKKVDLIAANFTITDERAKEVNFSL--PYFATGQKFIAHKG-VL 137 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + + I GT E+TL +++ I ++ A R A T D Sbjct: 138 KTPEDIGKLRIGADKGTVQEITLREHYPTA----KVISYDDTPLAFTALRNGNVQAITQD 193 Query: 198 ISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + L L ++ I P I+K I +G+ V+ T V E+ G Sbjct: 194 DAKLVGLLGNLPEAQKADFEISPFSITKEYQGVGIPKGEDRLTASVNETL---VKLEKDG 250 Query: 256 ITQKNINQVSKDTTNPDVQR 275 K ++ TN R Sbjct: 251 EAAKIYDRWFGPATNAAQPR 270 >gi|322372851|ref|ZP_08047387.1| polar amino acid uptake (PAAT) family ABC transporter, amino acid-binding protein [Streptococcus sp. C150] gi|321277893|gb|EFX54962.1| polar amino acid uptake (PAAT) family ABC transporter, amino acid-binding protein [Streptococcus sp. C150] Length = 277 Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats. Identities = 60/281 (21%), Positives = 115/281 (40%), Gaps = 24/281 (8%) Query: 3 KDFFVSILCLIILFFTS----FSTNASIL------GDIKKRGFLKCGINTGLVGFAEVKA 52 + V+ L + +F S + + S L I KRG L G+ + F A Sbjct: 8 RYLTVATLAIATVFLISSHKTVAEDKSKLLNSKAVQKIVKRGTLNVGVKQDVPNFGYYSA 67 Query: 53 NGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 + ++G +VD + ++ + K+ Y+P+ + R + + ID+L R+ Sbjct: 68 KTNTYEGMEVDLAKKIADEL---KVKVNYIPVTTQTREPLMDNGTIDLLIGTYTINDERK 124 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 S A Y+D GF++ K GI+ +S L+G +I V G +T+ L +Y AHN+K+ Sbjct: 125 AS--YAISSPYYYDQIGFLVLKDSGINKISDLNGKTIGVSQGASTKAALQEYASAHNLKF 182 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + + E+ + AHR +A++ D S L + L + A Sbjct: 183 NYVQLGSFPELAVSLYAHRVNAFSVDKSILSGY-----ESKKTKTLKEGFKTQEYGIASS 237 Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272 + + + + + ++ G QK ++ + Sbjct: 238 KSNQDLIDYTNDLLAKW---QKDGSLQKLYDKYHLKPAKAE 275 >gi|168485722|ref|ZP_02710230.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae CDC1087-00] gi|221231432|ref|YP_002510584.1| putative glutamine-binding protein precursor [Streptococcus pneumoniae ATCC 700669] gi|298229830|ref|ZP_06963511.1| putative glutamine-binding protein precursor [Streptococcus pneumoniae str. Canada MDR_19F] gi|298255470|ref|ZP_06979056.1| putative glutamine-binding protein precursor [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502401|ref|YP_003724341.1| amino acid ABC superfamily transporter ATP-binding protein [Streptococcus pneumoniae TCH8431/19A] gi|183571134|gb|EDT91662.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae CDC1087-00] gi|220673892|emb|CAR68398.1| putative glutamine-binding protein precursor [Streptococcus pneumoniae ATCC 700669] gi|298237996|gb|ADI69127.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus pneumoniae TCH8431/19A] Length = 254 Score = 186 bits (472), Expect = 5e-45, Method: Composition-based stats. Identities = 53/256 (20%), Positives = 100/256 (39%), Gaps = 14/256 (5%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRAL 67 ++ L L + + DI+KRG L G+ + F G + G + D + + Sbjct: 1 MISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYSGIETDLAKMV 60 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + KI+Y+P+ A+ R L ++Q+D+ T R+ Y D Sbjct: 61 ADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKLYNF--TSPYYTDAS 115 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 GF+++K I + L+ +I V G+ T+ + + K + + + E+ + Sbjct: 116 GFLVNKSAKIKKIEDLNSKTIGVAQGSITQCLITELGKKKGLTFKFVELGSYPELITSLH 175 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 AHR DA++ D S L +L D S + +TE + + Sbjct: 176 AHRIDAFSVDRSILSGYTSK-----RTELLDDSFKPSDYGIVTKKSNTELNDYLDNLVTK 230 Query: 248 MVTAEELGITQKNINQ 263 + G QK ++ Sbjct: 231 W---SKDGSLQKLYDR 243 >gi|222099043|ref|YP_002533611.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Thermotoga neapolitana DSM 4359] gi|221571433|gb|ACM22245.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Thermotoga neapolitana DSM 4359] Length = 246 Score = 186 bits (472), Expect = 5e-45, Method: Composition-based stats. Identities = 51/265 (19%), Positives = 110/265 (41%), Gaps = 21/265 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + V +L + ++ F+ + +IK RG+L G++ F V NG+ GFD Sbjct: 1 MRRLIAVLVLAISMVAFSGA------IEEIKSRGYLLVGLSADFPPFEFVDENGNIVGFD 54 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + ++ + + ++ + + +L +K+ID++ T R+ + Sbjct: 55 VDLAKEIARRLGVE---LKIVDMTFDGLIPSLLTKKIDVIISGMTITEERKKVVAF--SD 109 Query: 121 ITYFDGQGFIMHKKKGI--SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + GQ ++ K + L G ++ VQ GTT ++ ++ Y + + F++ Sbjct: 110 PYFDAGQVIVVRKDSDFRPKTYEDLVGKTVAVQIGTTGDIEVSKY-----EGINVVRFDK 164 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + + R DA D + A N + VI D++S A+ + DT+ Sbjct: 165 FTDAFLELKRKRADAVVLDSATARAFVSKNP---DIVISSDVLSSEQYGIAVRKEDTDLL 221 Query: 239 NIVSWTHYAMVTAEELGITQKNINQ 263 ++ + + + +K ++ Sbjct: 222 EFINGVLRELKKSPYDVLIEKWFSE 246 >gi|317153612|ref|YP_004121660.1| family 3 extracellular solute-binding protein [Desulfovibrio aespoeensis Aspo-2] gi|316943863|gb|ADU62914.1| extracellular solute-binding protein family 3 [Desulfovibrio aespoeensis Aspo-2] Length = 274 Score = 186 bits (472), Expect = 5e-45, Method: Composition-based stats. Identities = 55/272 (20%), Positives = 108/272 (39%), Gaps = 14/272 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + +S+L +++ + + + +K G++ + + +W GFDV Sbjct: 1 MRVLKISVLAALLVMAATVAFAGPTYDRVMSTKVVKAGMSNQGIPGGFINDKNEWVGFDV 60 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK--QIDILSRNTDWTLLREISLGLAFR 119 D ++ + K+ +N R +Q+ ++D++ N RE + F Sbjct: 61 DMATEIAKRLGCTLEKV---VVNNNTRVSFVQTDPPKVDMVLANMTH--KRERDQKIDFS 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA-HNMKYHPIVFER 178 +FDGQ F+ K + V L+G + GTT+ + +Y K N I ++ Sbjct: 116 ITYFFDGQKFLAKKGA-VKDVKDLAGMKVGSMQGTTSIVNATEYLKKLGNPDPKVIGYDG 174 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + A R+ R A + D + L P + ++ D IS P + Q D+ W Sbjct: 175 EIAMFEALRSGRVQAISTDSTILLGYAA--KVPGQFELVGDFISDEPYGIGLPQDDSAWR 232 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 +I+++T M + G N+ T+ Sbjct: 233 DIINFTIQDMW---KDGTYMTIYNKWFGPDTD 261 >gi|315638192|ref|ZP_07893374.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Campylobacter upsaliensis JV21] gi|315481728|gb|EFU72350.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Campylobacter upsaliensis JV21] Length = 262 Score = 186 bits (472), Expect = 5e-45, Method: Composition-based stats. Identities = 60/225 (26%), Positives = 95/225 (42%), Gaps = 8/225 (3%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKI 78 S NA L DIK +G L G+ + +A + G+ KGF+VD + L+ I D +KI Sbjct: 27 TSANAGKLEDIKAKGTLVVGVKNDVPHYALLDQKTGEIKGFEVDVAKKLAKEILGDENKI 86 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + + +NAK R L + +D++ T R+ + Y D G ++ K+KG Sbjct: 87 KLVAVNAKTRGPLLDNGTLDVVIATFTITPERKKIYNFSQ--PYYQDAIGLLVLKEKGYK 144 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 S++ + GA I V TT+ + + K + F I AA A R D ++ D Sbjct: 145 SLADMKGAKIGVAQAATTKRVIGEAAKKAGVSVSFSEFPDYPSIKAALDAKRVDVFSVDK 204 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 S L + ILPD + D E+ + Sbjct: 205 SILLGYV-----DEKSEILPDSFEPQDYGIVSKKDDVEFAAFIDK 244 >gi|294651269|ref|ZP_06728595.1| glutamate-aspartate ABC superfamily ATP binding cassette transporter, binding protein [Acinetobacter haemolyticus ATCC 19194] gi|292822835|gb|EFF81712.1| glutamate-aspartate ABC superfamily ATP binding cassette transporter, binding protein [Acinetobacter haemolyticus ATCC 19194] Length = 314 Score = 186 bits (472), Expect = 5e-45, Method: Composition-based stats. Identities = 51/285 (17%), Positives = 100/285 (35%), Gaps = 27/285 (9%) Query: 3 KDFFVSILCLIILFFTSFS------------------TNASILGDIKKRGFLKCGINTGL 44 K S+LC L F + + + L IK G + G Sbjct: 4 KRTMTSLLCASALMFGLSACSDNKAPAAGDKATEGDVSTSGTLNKIKSSGTIVLGYRDSS 63 Query: 45 VGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDI 99 + F+ + N +G+ D + A+ + KI+Y + ++ R + + +D+ Sbjct: 64 IPFSYIAGNPNQPEGYAHDLQLKVVEAVKQKLNMPDLKIRYNLVTSQNRIPLVSNGTVDL 123 Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELT 159 +T R+ + + + G + K GI + L G + AGTT+E Sbjct: 124 ECGSTTNNKERQQQVDFSVG--FFEVGSRLLTAKDSGIKDFADLKGKKLVTTAGTTSERY 181 Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219 + + + + I + E + R A+ D L K P++ I+ Sbjct: 182 IRQHQQELGIG-EIISAKDHAESFLMLQNGRAVAFMMDDILLAGEKSKAKDPNKWNIVGT 240 Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQKNINQ 263 + + +GDT + +V A + E+ + +K Q Sbjct: 241 APIQEIYGCMLRKGDTGFKQVVDDAIKATYASGEINQMYEKWFQQ 285 >gi|238750309|ref|ZP_04611811.1| Extracellular solute-binding protein, family 3 [Yersinia rohdei ATCC 43380] gi|238711542|gb|EEQ03758.1| Extracellular solute-binding protein, family 3 [Yersinia rohdei ATCC 43380] Length = 284 Score = 186 bits (472), Expect = 5e-45, Method: Composition-based stats. Identities = 57/260 (21%), Positives = 98/260 (37%), Gaps = 16/260 (6%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSK 77 S + +A L DIK+ G ++ + F + G+DVD A++ + K Sbjct: 24 SGTAHADKLDDIKQAGVVRIAVFDSNPPFGYIDPQTKKLVGYDVDVANAIAKDLG---VK 80 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++ N R L +K++D+++ N T R + + + GQ FI HK + Sbjct: 81 VELRATNPANRIPLLTAKKVDLIAANFTITDERAKEVNFSL--PYFATGQKFIAHKG-VL 137 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + + I GT E+TL +++ I ++ A R A T D Sbjct: 138 KTPEDIGKLRIGADKGTVQEITLREHYPTA----KVISYDDTPLAFTALRNGNVQAITQD 193 Query: 198 ISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + L L ++ I P I+K I +G+ V+ T V E+ G Sbjct: 194 DAKLVGLLGNLPEAQKADFEISPFSITKEYQGVGIAKGEDRLTASVNETL---VKLEKDG 250 Query: 256 ITQKNINQVSKDTTNPDVQR 275 K ++ TN R Sbjct: 251 EAAKIYDRWFGPATNAAQPR 270 >gi|57242093|ref|ZP_00370033.1| amino acid ABC transporter, amino acid-binding protein [Campylobacter upsaliensis RM3195] gi|57017285|gb|EAL54066.1| amino acid ABC transporter, amino acid-binding protein [Campylobacter upsaliensis RM3195] Length = 257 Score = 186 bits (472), Expect = 5e-45, Method: Composition-based stats. Identities = 60/225 (26%), Positives = 95/225 (42%), Gaps = 8/225 (3%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKI 78 S NA L DIK +G L G+ + +A + G+ KGF+VD + L+ I D +KI Sbjct: 22 TSANAGKLEDIKAKGTLVVGVKNDVPHYALLDQKTGEIKGFEVDVAKKLAKEILGDENKI 81 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + + +NAK R L + +D++ T R+ + Y D G ++ K+KG Sbjct: 82 KLVAVNAKTRGPLLDNGTLDVVIATFTITPERKKIYNFSQ--PYYQDAIGLLVLKEKGYK 139 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 S++ + GA I V TT+ + + K + F I AA A R D ++ D Sbjct: 140 SLADMKGAKIGVAQAATTKRVIGEAAKKAGVSVSFSEFPDYPSIKAALDAKRVDVFSVDK 199 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 S L + ILPD + D E+ + Sbjct: 200 SILLGYV-----DEKSEILPDSFEPQDYGIVSKKDDVEFAAFIDK 239 >gi|268319108|ref|YP_003292764.1| amino acid ABC transporter solute-binding component [Lactobacillus johnsonii FI9785] gi|262397483|emb|CAX66497.1| amino acid ABC transporter solute-binding component [Lactobacillus johnsonii FI9785] Length = 273 Score = 186 bits (472), Expect = 5e-45, Method: Composition-based stats. Identities = 50/279 (17%), Positives = 106/279 (37%), Gaps = 17/279 (6%) Query: 1 MYKD--FFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55 M + FF + L +F S ++ ++KK + G+ F + G Sbjct: 1 MKRKLRFFSLFIVLFSVFLLSACQKNTRNVYQEVKKSNEITWGVKADTRLFGLMSIKTGK 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +GF+VD AL+ I +K ++ AK + L+++ ID + T R+ + Sbjct: 61 IEGFEVDLANALTKEILGKNAKANFVQTTAKTKIPLLKNENIDAVLAAMTITPERKKQID 120 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 ++ GQ ++ I +V L+G + GTT + + + Sbjct: 121 F--SDPYFYAGQSLLVKDDSSIKNVRDLNGKTALAVKGTTAVDNVKKFAPKA----KVLE 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 ++ + A +A + A T D L + N + ++ + P A+ +G T Sbjct: 175 YDDYGQAFTALKAGQGQAMTTDNGLLAGIATENKG---YKLVGGTYTNEPYGIAVNKGQT 231 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 + N ++ A+V ++ G + + +++ Sbjct: 232 QMRNAIN---RALVKLKKDGTYDALVKKWFSGIPGFNIK 267 >gi|251781981|ref|YP_002996283.1| amino acid ABC transporter amino acid-binding protein [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390610|dbj|BAH81069.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 268 Score = 185 bits (471), Expect = 6e-45, Method: Composition-based stats. Identities = 57/266 (21%), Positives = 113/266 (42%), Gaps = 17/266 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAEV-KANG 54 M K + I L+ L S S + ++L I K+G L+ G+ + F + Sbjct: 3 MKKYSLLVICFLLTLICPSLSQASELTTPNVLKQITKKGQLRIGVKQDVPNFGYYHPKHR 62 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 ++G ++D + ++ A+ P Q+ + A+ R L ++Q+D++ T R+ Sbjct: 63 QFEGMEIDIAKKIAKALNVKP---QFTAVTAQTREALLDNQQLDMIIATYTITPERQKQ- 118 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 AF Y D GF++ K I+S+ +L +I V G+TT+ + +Y KAH++ + + Sbjct: 119 -YAFSNPYYLDEIGFLVKKSDAITSIKELDQKTIGVAQGSTTKNAIEEYGKAHDLSFSFV 177 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 E+ + A+R +++ D S L + IL + ++ A + + Sbjct: 178 QLGSYPELAISLYANRIASFSVDKSILSGYTNQ-----KTTILTEGFNQQAYGVATTKSN 232 Query: 235 TEWYNIVSWTHYAMVTAEEL-GITQK 259 ++ L I +K Sbjct: 233 KALITHINKLLEQWQKDGSLAKIYRK 258 >gi|309779093|ref|ZP_07673860.1| extracellular solute-binding protein [Ralstonia sp. 5_7_47FAA] gi|308922158|gb|EFP67788.1| extracellular solute-binding protein [Ralstonia sp. 5_7_47FAA] Length = 295 Score = 185 bits (471), Expect = 7e-45, Method: Composition-based stats. Identities = 57/257 (22%), Positives = 100/257 (38%), Gaps = 16/257 (6%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQY 80 A L DIKK G L+ G+ F A G+ G DVD+ + +++ + K++ Sbjct: 44 ARADKLDDIKKAGVLRVGVFDANPPFGYADAKTGEPVGLDVDYAQEIANKLG---VKLEL 100 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 N R L S ++DI++ N T R+ + + YF + KK + Sbjct: 101 RATNPANRVPLLTSGKVDIVAANFTITDERKKQIEFS---TPYFASGLQFIAKKGVLKQP 157 Query: 141 SQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 L G + V GTT E TL + + I ++ A R A+ D Sbjct: 158 DDLKKDGIRLGVDKGTTQETTLREGYPNA----RVIAYDDSPLALTALRTGAIQAFAQDG 213 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 + L AL T SE I P ++++ + + +G+T+ + E+ G Sbjct: 214 AKLGALLATLPNRSELEISPFVLTREYMGIGVPKGETKLTATIDQILQG---LEKDGTAG 270 Query: 259 KNINQVSKDTTNPDVQR 275 + ++ + + R Sbjct: 271 RIYDRWFGPKSAAPLPR 287 >gi|224437618|ref|ZP_03658571.1| bifunctional adhesin/ABC transporter aspartate/glutamate-binding protein [Helicobacter cinaedi CCUG 18818] gi|313144069|ref|ZP_07806262.1| amino acid ABC transporter [Helicobacter cinaedi CCUG 18818] gi|313129100|gb|EFR46717.1| amino acid ABC transporter [Helicobacter cinaedi CCUG 18818] Length = 258 Score = 185 bits (471), Expect = 7e-45, Method: Composition-based stats. Identities = 60/243 (24%), Positives = 98/243 (40%), Gaps = 8/243 (3%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFD 60 +K ++L + NA +L DIKKRG + G+ + FA + +GF+ Sbjct: 5 FKGMLKIAGLFLVLGIFALQANAGMLEDIKKRGEIVVGVKNDVPCFALLDQKTKEIQGFE 64 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + L+ +I D KI+ + +NAK R L + ID + T R+ + + Sbjct: 65 VDVAKLLAKSILGDEKKIKLVAVNAKTRGPLLDNGSIDAVIATFTITPERKRTYNFSQA- 123 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y D G ++ K+KG S++ + +I V T++ + K + F Sbjct: 124 -YYKDAVGLLVLKEKGYKSIADMKNTTIGVAQAATSKKAIDAAAKKLGVNVKFNEFPDYP 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 I AA A R DA+ D S L + ILPD + D E+ Sbjct: 183 SIKAALDAKRVDAFGVDKSILLGYV-----DDKSEILPDSFEPQEYGIVSPKKDKEFATF 237 Query: 241 VSW 243 + Sbjct: 238 IDK 240 >gi|312862723|ref|ZP_07722963.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus vestibularis F0396] gi|311101583|gb|EFQ59786.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus vestibularis F0396] Length = 277 Score = 185 bits (471), Expect = 7e-45, Method: Composition-based stats. Identities = 62/286 (21%), Positives = 117/286 (40%), Gaps = 28/286 (9%) Query: 2 YKDFF--VSILCLIILFF------------TSFSTNASILGDIKKRGFLKCGINTGLVGF 47 +K F +++ CL I+ TS ++ + I KRG L G+ + F Sbjct: 3 FKKFLRYLTVACLAIVTIFLISSYKTKAEDTSKLLDSKAVQKIVKRGTLNVGVKQDVPNF 62 Query: 48 AEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 A + ++G +VD + ++ + K+ Y+P+ + R + + ID+L Sbjct: 63 GYYSAKTNSYEGMEVDLAKKIADEL---KVKVNYIPVTTQTREPLMDNGTIDLLIGTYTI 119 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 R+ S A Y D GF++ K GI+ +S L+G +I V G +T+ L +Y A Sbjct: 120 NDERKAS--YAISDPYYHDQIGFLVLKNSGINKISDLNGKTIGVSQGASTKAALQEYASA 177 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 HN+K++ + E+ + AHR +A++ D S L + L + Sbjct: 178 HNLKFNYVQLGSFPELAVSLYAHRVNAFSVDKSILSGY-----ESKKTKTLKEGFKTQEY 232 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272 A + + E + + ++ G QK ++ + Sbjct: 233 GIASSKSNQELIDYTNDLIAKW---QKDGSLQKLYDKYHLKPAKAE 275 >gi|289673926|ref|ZP_06494816.1| extracellular solute-binding protein [Pseudomonas syringae pv. syringae FF5] gi|330971240|gb|EGH71306.1| extracellular solute-binding protein [Pseudomonas syringae pv. aceris str. M302273PT] Length = 264 Score = 185 bits (470), Expect = 8e-45, Method: Composition-based stats. Identities = 52/253 (20%), Positives = 97/253 (38%), Gaps = 4/253 (1%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 +L T + S L + KRG L G + + A+G +GFD+D R ++ +F+ Sbjct: 1 MLANTVQAAEGSKLDAVLKRGNLVVGTGSTNAPWHFQGADGKLQGFDIDIGRIIAKGLFN 60 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 DPSK++++ ++ R L + ++DI + T R + Y +G ++ Sbjct: 61 DPSKVEFVVQSSDARIPNLLTDKVDISCQFITVTASRAQQVAFTL--PYYREGVALLLPA 118 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 + L A V + + K ++ V+ + A + R D Sbjct: 119 NSKYKEIDDLKAAGDDVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLMYQAINSGRADT 178 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 D S++ L + P + S A A+ +GD +W N V+ + +T E Sbjct: 179 AATDQSSVKYLMVQ--NPGRYRSPAFAWSPQTYACAVKRGDQDWLNFVNTALHEAMTGVE 236 Query: 254 LGITQKNINQVSK 266 + Q Sbjct: 237 FPAYAASFKQWFG 249 >gi|55823084|ref|YP_141525.1| amino acid (glutamine) ABC transporter substrate-binding protein [Streptococcus thermophilus CNRZ1066] gi|55739069|gb|AAV62710.1| amino acid (glutamine) ABC transporter substrate-binding protein [Streptococcus thermophilus CNRZ1066] Length = 277 Score = 185 bits (470), Expect = 8e-45, Method: Composition-based stats. Identities = 61/276 (22%), Positives = 112/276 (40%), Gaps = 23/276 (8%) Query: 7 VSILCLIILFFTSFSTNAS---------ILGDIKKRGFLKCGINTGLVGFAEVKAN-GDW 56 VS++ + T+ T A + I RG L G+ + F A + Sbjct: 13 VSLVIATVFLITNHKTEAEDTSKLLDSKAVQKIVNRGTLNVGVKQDVPNFGYYSAKTNRY 72 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +G +VD + ++ + K+ Y+P+ + R + + ID+L R+ S Sbjct: 73 EGMEVDLAKKIADELR---VKVNYIPVTTQTREPLMDNGTIDLLIGTYTINDERKAS--Y 127 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 A Y D GF++ K GI+ +S L+G +I V G +T+ L +Y AHN+K++ + Sbjct: 128 AISNPYYRDQIGFLVLKDSGINKISDLNGKTIGVAQGASTKAALQEYASAHNLKFNYVQL 187 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E+ + AHR DA++ D S L + IL + A + + E Sbjct: 188 GSYPELAVSLYAHRVDAFSVDKSILSGY-----ESKKTKILNEGFKTQDYGIASSKSNQE 242 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272 + + ++ G QK ++ + + Sbjct: 243 LIDYTNDLIAKW---QKDGSLQKLYDKYNLKPAKAE 275 >gi|257459775|ref|ZP_05624884.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] gi|257443200|gb|EEV18334.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] Length = 269 Score = 185 bits (470), Expect = 8e-45, Method: Composition-based stats. Identities = 60/259 (23%), Positives = 117/259 (45%), Gaps = 15/259 (5%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 L I+F A L I+ G +K G+ G F++ K+ G+++GF+++ A++ Sbjct: 3 LLFCIIFTLCSGVFAGSLEQIRSAGVVKIGVRDGRPPFSDEKS-GNFEGFEINLADAIAK 61 Query: 70 AIFDDP-SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 +IF D +++++PLNA +R ALQ+ ++D+ T R+ + + G Sbjct: 62 SIFGDKRGRVEFVPLNASDRISALQNDKVDLAVATITITQDRKRQIDF--SYPYFSMSLG 119 Query: 129 FIMHKKKGISSVSQLSGASICVQ-AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 + K GI S+ LS + V+ GTT E F N ++ I E + Sbjct: 120 VLTRKSDGIKSIDDLSNKKVLVEGNGTTAE-----NFLYKNKIHNLIHCSITTECYDMLK 174 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 + DAY D + A + +D V + ++ + L + +G+TE ++++ A Sbjct: 175 QGKADAYVNDNLIVLAYSIIDDN--LEVAIQNLGNPEFLGIGVRKGNTELLDLINKELVA 232 Query: 248 MVTAEELGITQKNINQVSK 266 + G +++ ++ K Sbjct: 233 ---LSKQGFFERSYDETFK 248 >gi|302024082|ref|ZP_07249293.1| glutamine-binding protein precursor [Streptococcus suis 05HAS68] Length = 270 Score = 185 bits (470), Expect = 8e-45, Method: Composition-based stats. Identities = 57/267 (21%), Positives = 104/267 (38%), Gaps = 20/267 (7%) Query: 4 DFFVSILCLIILF--------FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-G 54 V L LI+ + TN+ + I RG L+ G+ + F + G Sbjct: 4 RLLVCALILIVFAKQPVAQTETPASITNSDQVQAIIDRGVLRVGVKQDVPNFGYKNPDTG 63 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 +++G ++D R ++ + D I++ P+ A+ R L + Q+D++ T R L Sbjct: 64 EFEGMEIDIARKIADELGVD---IEFTPVTAQTRGPLLDNGQVDMVIATFTITEER--KL 118 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F Y D GF+++K GI + + L G +I V G+ T ++ + + + Sbjct: 119 LYNFTTPYYTDAVGFLVNKDSGIKTFTDLDGKTIGVAQGSITRTLISKLADKYGISVNFA 178 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 E+ + RAHR DA++ D S L + ++ S S + Sbjct: 179 ELGSYPELSVSLRAHRTDAFSVDQSILSGYISSKS-----ELMDFSFSASDYGIVTKLSN 233 Query: 235 TEWYNIVSWTHYAMVTAEELG-ITQKN 260 + N ++ L I N Sbjct: 234 KDLNNYLNSLVEKWTADGSLQSIYDAN 260 >gi|299783155|gb|ADJ41153.1| ABC transporter substrate binding component [Lactobacillus fermentum CECT 5716] Length = 284 Score = 185 bits (470), Expect = 9e-45, Method: Composition-based stats. Identities = 61/267 (22%), Positives = 113/267 (42%), Gaps = 11/267 (4%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 S++ L +N S + IKKRG+++ + L + V +G G+DV R + Sbjct: 19 SLVSFAGLSSAKADSNQSSVSAIKKRGYIRIAVFGDLQPYGWVNKDGKRVGYDVRLARQI 78 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + K++++ +NA R L S + D++ N T R+ + A Sbjct: 79 AKDLG---VKVKFVQVNANNRVDTLNSNKADLVLANFTVTDERKQVIDFA--KPYMKVSI 133 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 G + K I+ VSQL SI + GTT E +K + F+ + A + Sbjct: 134 GVVSLKSDPITKVSQLKNKSIIINKGTTAENYFVSNQSKLGIK-SILKFDTKTQQFNALK 192 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 R +A D S LYA P V + + ++PA+ +G+ ++++WT+ Sbjct: 193 NKRANALADDNSYLYAWVK--KNPKYTVGIKTLGPSQDISPAVKKGN---KSLLNWTNKE 247 Query: 248 MVTAEELGITQKNINQVSKDTTNPDVQ 274 + + G + + N+ K +V+ Sbjct: 248 ITKLNKDGFFKTDFNKELKPYFGSEVK 274 >gi|284033844|ref|YP_003383775.1| extracellular solute-binding protein family 3 protein [Kribbella flavida DSM 17836] gi|283813137|gb|ADB34976.1| extracellular solute-binding protein family 3 [Kribbella flavida DSM 17836] Length = 326 Score = 185 bits (470), Expect = 9e-45, Method: Composition-based stats. Identities = 54/250 (21%), Positives = 106/250 (42%), Gaps = 14/250 (5%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 S + IK++G L+ GI+ + G +GFD+D R ++ AIF DP+K++ + Sbjct: 76 GSTMAKIKQQGRLRAGISADSLNLGSRNPITGAIEGFDIDMVREVARAIFGDPNKVELVV 135 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 +++ +R LQ +DI++RN R + + Y GQ ++ + +++ Sbjct: 136 ISSPQRIPVLQQNTVDIVARNMTINCARWQQIAFSAE--YYRSGQKVLVQRDSTARTLAD 193 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G +IC AG+T+ L ++ PI + ++ + TGD + L Sbjct: 194 LPGRTICAPAGSTSLDNLKKFYPE----VKPITADTDTGCLVLFQQGKAYGITGDDTVLA 249 Query: 203 ALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 + ILP+ S+ P + + + ++ V+ M G + + Sbjct: 250 GEAAQDP---YAKILPEPPFSQEPYGLGMNKDEVDFVQFVNGVLEQMKA---DGRWKASY 303 Query: 262 NQVSKDTTNP 271 ++ T P Sbjct: 304 DKWLAPTLGP 313 >gi|257095474|ref|YP_003169115.1| family 3 extracellular solute-binding protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047998|gb|ACV37186.1| extracellular solute-binding protein family 3 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 285 Score = 185 bits (470), Expect = 9e-45, Method: Composition-based stats. Identities = 62/257 (24%), Positives = 105/257 (40%), Gaps = 7/257 (2%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + + L ++ + S+L IK+ G LK G + F+ V + +G+ V Sbjct: 3 KRTLLLGGLVASLVIAMPVMASESVLARIKQSGTLKLGYRENSMPFSFVGDDKQPRGYSV 62 Query: 62 DFCRALSSAIFD----DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 D CR ++ + ++++P+ A+ RF AL+S ID+ NT TL R + Sbjct: 63 DLCRIVAEDLGKQLDLPKLDVRWVPVTAQSRFEALKSGAIDLECGNTTQTLARRADFDFS 122 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 T+ DG G + + SS+ G + V AGTTTE TL D A + + I Sbjct: 123 LM--TFIDGAGLLFLDGEVPSSLEATKGQRVAVVAGTTTEKTLEDLIAAGKLGVYLIKVP 180 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + A + AY D + L L + + S P A+ + D ++ Sbjct: 181 DHDAALRALKDKTATAYAADRTVLITTALVRGQGQAFALATLQFSYEPYGLAMRR-DADF 239 Query: 238 YNIVSWTHYAMVTAEEL 254 V T + + E+ Sbjct: 240 RLAVDRTLARLYRSGEI 256 >gi|184155299|ref|YP_001843639.1| ABC transporter substrate binding component [Lactobacillus fermentum IFO 3956] gi|227514602|ref|ZP_03944651.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus fermentum ATCC 14931] gi|260662187|ref|ZP_05863083.1| ABC transporter substrate binding component [Lactobacillus fermentum 28-3-CHN] gi|183226643|dbj|BAG27159.1| ABC transporter substrate binding component [Lactobacillus fermentum IFO 3956] gi|227087013|gb|EEI22325.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus fermentum ATCC 14931] gi|260553570|gb|EEX26462.1| ABC transporter substrate binding component [Lactobacillus fermentum 28-3-CHN] Length = 284 Score = 185 bits (470), Expect = 9e-45, Method: Composition-based stats. Identities = 61/267 (22%), Positives = 113/267 (42%), Gaps = 11/267 (4%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 S++ L +N S + IKKRG+++ + L + V +G G+DV R + Sbjct: 19 SLVSFAGLSSAKADSNQSSVSAIKKRGYIRIAVFGDLQPYGWVNKDGKRVGYDVRLARQI 78 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + K++++ +NA R L S + D++ N T R+ + A Sbjct: 79 AKDLG---VKVKFVQVNANNRVDTLNSNKADLVLANFTVTDERKQVVDFA--KPYMKVSI 133 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 G + K I+ VSQL SI + GTT E +K + F+ + A + Sbjct: 134 GVVSLKSDPITKVSQLKNKSIIINKGTTAENYFVSNQSKLGIK-SILKFDTKTQQFNALK 192 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 R +A D S LYA P V + + ++PA+ +G+ ++++WT+ Sbjct: 193 NKRANALADDNSYLYAWVK--KNPKYTVGIKTLGPSQDISPAVKKGN---KSLLNWTNKE 247 Query: 248 MVTAEELGITQKNINQVSKDTTNPDVQ 274 + + G + + N+ K +V+ Sbjct: 248 ITKLNKDGFFKTDFNKELKPYFGSEVK 274 >gi|186475671|ref|YP_001857141.1| extracellular solute-binding protein [Burkholderia phymatum STM815] gi|184192130|gb|ACC70095.1| extracellular solute-binding protein family 3 [Burkholderia phymatum STM815] Length = 304 Score = 185 bits (470), Expect = 9e-45, Method: Composition-based stats. Identities = 51/260 (19%), Positives = 97/260 (37%), Gaps = 11/260 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 +K ++ + L + + +A L I G + G+ + F+ + Sbjct: 7 HKLMAMATIVAAALASRAPAAHADELTGTLKKIHDDGVITLGVREASIPFSYFNGD-RTI 65 Query: 58 GFDVDFCRALSSAIFD----DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ A+ I +++ +P+ + RF+ L + QID+ +T T RE Sbjct: 66 GYSQSIALAIVDDIKKTLAMPDLRVREVPITSANRFMMLANNQIDLECGSTTHTRERESV 125 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + Y I K GI+ L+G + AGT+ E + + Sbjct: 126 AAFSNSFFQY--AVRMIARKNAGITDFPDLAGKPVVTTAGTSDERLVRQLNSEKQLNMRI 183 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + + AA +A R A+ D LY + T+ RP + ++ + A +G Sbjct: 184 ASAKDHADAFAAVKADRAVAFVMDEPILYGFRATDPRPDDFIVTGTPLGYETYACMFRKG 243 Query: 234 DTEWYNIVSWTHYAMVTAEE 253 D + +V+ M T+ E Sbjct: 244 DAPFRELVNRVISKMQTSGE 263 >gi|330900314|gb|EGH31733.1| extracellular solute-binding protein [Pseudomonas syringae pv. japonica str. M301072PT] Length = 264 Score = 185 bits (470), Expect = 1e-44, Method: Composition-based stats. Identities = 52/253 (20%), Positives = 97/253 (38%), Gaps = 4/253 (1%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 +L T + S L + KRG L G + + A+G +GFD+D R ++ +F+ Sbjct: 1 MLANTVQAAEGSKLDAVSKRGNLVVGTGSTNAPWHFQGADGKLQGFDIDIGRIIAKGLFN 60 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 DPSK++++ ++ R L + ++DI + T R + Y +G ++ Sbjct: 61 DPSKVEFVVQSSDARIPNLLTDKVDISCQFITVTASRAQQVAFTL--PYYREGVALLLPA 118 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 + L A V + + K ++ V+ + A + R D Sbjct: 119 NSKYKEIDDLKAAGDDVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLMYQAINSGRADT 178 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 D S++ L + P + S A A+ +GD +W N V+ + +T E Sbjct: 179 AATDQSSVKYLMVQ--NPGRYRSPAFAWSPQTYACAVKRGDQDWLNFVNTALHEAMTGVE 236 Query: 254 LGITQKNINQVSK 266 + Q Sbjct: 237 FPAYAASFKQWFG 249 >gi|226362801|ref|YP_002780579.1| ABC transporter substrate-binding protein [Rhodococcus opacus B4] gi|226241286|dbj|BAH51634.1| putative ABC transporter substrate-binding protein [Rhodococcus opacus B4] Length = 336 Score = 185 bits (469), Expect = 1e-44, Method: Composition-based stats. Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 10/246 (4%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRA 66 ++ L + S L +I RG L GI+ F+ G GFDVD Sbjct: 74 ALASLRPVTAPDVRAPGSALAEITARGRLVVGIDQNTNLFSFRDPTTGMLMGFDVDVAGE 133 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 ++ +F DP+++++ L + +RF AL+ K +D++ ++T T R S +AF + + Sbjct: 134 MARDLFGDPARVEFRLLTSGDRFDALEKKAVDLVVKSTTITCER--SERVAFSTVYFQAY 191 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 Q ++ K GIS L+G +C A TT+ T+ A + ++ Sbjct: 192 QRLLVPKVSGISGPEDLAGKRVCTVADTTSLDTVRRVQPAA----TIVTVPDWDDCLVTL 247 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + R DA + D S L L + I+ + P + +G+ + V+ T Sbjct: 248 QQRRADAASTDDSILAGLAAQDPN---LEIVGPPLHSEPYGIGVNKGNEDLVRFVNGTLD 304 Query: 247 AMVTAE 252 M Sbjct: 305 RMRADG 310 >gi|111019187|ref|YP_702159.1| amino acid ABC transporter ATP-binding protein [Rhodococcus jostii RHA1] gi|110818717|gb|ABG94001.1| probable ABC amino acid transporter, binding component [Rhodococcus jostii RHA1] Length = 326 Score = 185 bits (469), Expect = 1e-44, Method: Composition-based stats. Identities = 54/255 (21%), Positives = 100/255 (39%), Gaps = 10/255 (3%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPS 76 T + + I+ RG L G++TG + A G +GFDVD R ++ +F DP Sbjct: 74 TDAAPPMPTVDAIRARGRLVVGLDTGSNLMSFRDPATGAVQGFDVDIAREIARDLFGDPD 133 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 +++Y L + R ALQ +DI+++ T R+ + + + Q ++ K Sbjct: 134 RLEYRILTSANREKALQESMVDIVAKTMTITCDRKERVAFSSE--YFEAQQRVLVVKGSP 191 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 I S + L G +CV GTT+ L ++ P+ + + + DA + Sbjct: 192 IRSAADLDGKRVCVVRGTTSLTRLQQVAPTADILTVPM----WSDCLVVLQQRQVDAVST 247 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 D + L L + I+ D + P I + + + V+ T + Sbjct: 248 DDTILAGLASQDP---YLEIVGDSMGAEPYGVGITKANEDLVRFVNGTLERIRRDGTWTR 304 Query: 257 TQKNINQVSKDTTNP 271 + + + P Sbjct: 305 MYDHWLSMLGPSPAP 319 >gi|86152788|ref|ZP_01070993.1| glutamine-binding protein [Campylobacter jejuni subsp. jejuni HB93-13] gi|85843673|gb|EAQ60883.1| glutamine-binding protein [Campylobacter jejuni subsp. jejuni HB93-13] Length = 259 Score = 185 bits (469), Expect = 1e-44, Method: Composition-based stats. Identities = 60/244 (24%), Positives = 101/244 (41%), Gaps = 10/244 (4%) Query: 2 YKDFF-VSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKG 58 K +++ L + + F++ + L IK +G L G+ + +A + A G+ KG Sbjct: 4 RKSLLKLAVFALGVCVAFSNANAAEGKLESIKSKGQLIVGVKNDVPHYALLDQATGEIKG 63 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 F+VD + L+ +I D KI+ + +NAK R L + +D + T R+ + Sbjct: 64 FEVDVAKLLAKSILGDDKKIKLVAVNAKTRGPLLDNGSVDAVIATFTITPERKRIYNFSE 123 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y D G ++ K+K S++ + GA+I V TT+ + K + F Sbjct: 124 --PYYQDAIGLLVLKEKNYKSLADMKGANIGVAQAATTKKAIGKAAKKIGIDVKFSEFPD 181 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 I AA A R DA++ D S L + ILPD + D + Sbjct: 182 YPSIKAALDAKRVDAFSVDKSILLGYV-----DDKSEILPDSFEPQSYGIVTKKDDPAFA 236 Query: 239 NIVS 242 V Sbjct: 237 KYVD 240 >gi|299531723|ref|ZP_07045127.1| extracellular solute-binding protein [Comamonas testosteroni S44] gi|298720282|gb|EFI61235.1| extracellular solute-binding protein [Comamonas testosteroni S44] Length = 269 Score = 185 bits (469), Expect = 1e-44, Method: Composition-based stats. Identities = 42/240 (17%), Positives = 92/240 (38%), Gaps = 7/240 (2%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQYLP 82 + IK+ G + G GF+ + G+ +D C + AI + I+Y Sbjct: 1 MKKIKESGTITLGHREASFGFSYISDTATPIGYSLDICMKIVDAIKAELKQPKIDIKYQV 60 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R + + +D+ +T + R+ + P + + GI S++ Sbjct: 61 VTSQNRIPLVTNGTVDLECGSTTNLVERQKDVAF--SPDIFRYNVRMAVKASSGIKSIAD 118 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G S+ AGTT+ L + + ++ + + + + R A+ D L Sbjct: 119 LQGKSVVTTAGTTSFRLLRETNRGKVLEVTQLSGKDHLDSFLLLNSGRAAAFVLDDILLA 178 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNI 261 L P E +I + + + + + D ++ +V M+ + E+ + +K Sbjct: 179 GLIANTQNPKEFIITGENLRTENQSLMLRKDDPQFKALVDRVVVGMMKSGEMETLYKKWF 238 >gi|83745986|ref|ZP_00943042.1| Amino-acid ABC transporter binding protein ybeJ precursor [Ralstonia solanacearum UW551] gi|207741994|ref|YP_002258386.1| substrate-binding periplasmic protein (pbp) [Ralstonia solanacearum IPO1609] gi|83727380|gb|EAP74502.1| Amino-acid ABC transporter binding protein ybeJ precursor [Ralstonia solanacearum UW551] gi|206593380|emb|CAQ60307.1| substrate-binding periplasmic protein (pbp) [Ralstonia solanacearum IPO1609] Length = 299 Score = 185 bits (469), Expect = 1e-44, Method: Composition-based stats. Identities = 48/275 (17%), Positives = 105/275 (38%), Gaps = 11/275 (4%) Query: 3 KDFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + +++L + + + + L I++ G ++ V F+ G G+ + Sbjct: 6 RTRRLAVLAVPLAVSAVHAMASTPTLDRIRETGNIRLAYREDSVPFSYTDG-GKPIGYSI 64 Query: 62 DFCRALSSAI----FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 D C + AI K+QYLP+ A R + S + D+ +T+ R + Sbjct: 65 DICSRVVDAIRTSLKRPELKVQYLPVTAANRMDTIASGKADLECGSTNNAPDRREKVAFT 124 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y ++ G+ L G ++ G++ + A M + Sbjct: 125 I--PHYITKGRMLVKASSGLQQWEDLHGKTVVAARGSSAADVMHKLNDATGMGMRTVDTN 182 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 ++ + + + DA+ GD L ++ T+D P+E+V+ S A + + D E+ Sbjct: 183 DLKTAFSMLSSGKADAFAGDDVLLAGMRATSDNPTEYVVAGKTQLVSSYAMMMSKQDAEF 242 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272 ++ + ++ E+ QK + + P+ Sbjct: 243 KKLIDQSMTRLIVDGEV---QKLYKKWFQQPIPPN 274 >gi|153946989|ref|YP_001403107.1| polar amino acid ABC transporter periplasmic amino acid-binding protein [Yersinia pseudotuberculosis IP 31758] gi|152958484|gb|ABS45945.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Yersinia pseudotuberculosis IP 31758] Length = 284 Score = 185 bits (469), Expect = 1e-44, Method: Composition-based stats. Identities = 55/255 (21%), Positives = 98/255 (38%), Gaps = 16/255 (6%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSK 77 S + A L DIK+ G ++ + F + G+DVD A++ + K Sbjct: 24 SGTAYADKLDDIKQAGVVRIAVFDSNPPFGYIDPQTKKLVGYDVDVANAIAKDLG---VK 80 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++ N R L SK++D+++ N T R + + + GQ FI K + Sbjct: 81 VELRATNPANRIPLLASKKVDLIAANFTITDERAKEVNFSL--PYFATGQKFIARKG-VL 137 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + + I GT E+TL +++ I ++ A R A T D Sbjct: 138 KTPEDIGKLRIGADKGTVQEITLREHYPTA----KVISYDDTPLAFTALRNGNVQAITQD 193 Query: 198 ISALYALK--LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + L L + + ++ I P I+K I +G+ +V+ T + E+ G Sbjct: 194 DAKLVGLLGNIPEAQKADFEISPFSITKEYQGVGIPKGEDRLTAVVNETL---IKLEKEG 250 Query: 256 ITQKNINQVSKDTTN 270 K ++ TN Sbjct: 251 EAVKIYDRWFGPETN 265 >gi|170743518|ref|YP_001772173.1| extracellular solute-binding protein [Methylobacterium sp. 4-46] gi|168197792|gb|ACA19739.1| extracellular solute-binding protein family 3 [Methylobacterium sp. 4-46] Length = 305 Score = 185 bits (469), Expect = 1e-44, Method: Composition-based stats. Identities = 55/238 (23%), Positives = 90/238 (37%), Gaps = 10/238 (4%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKA---NGDWKGFDVDFCRALS----SAIFDDPSK 77 L G + G T + F+ V+ G G+ +D C+ + AI D + Sbjct: 33 GTLRKAATSGVVAIGYRTSSIPFSFVEEGRGEGRPVGYAIDLCQEIVDEIGRAIGRDDLR 92 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 I+++P+ ++ R AL S +ID+ +T R S+ P+T+ ++ + I Sbjct: 93 IRFVPVTSESRIPALLSGEIDLECGSTTANAERRRSVAF--SPVTFVSATTLLVPRGSAI 150 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 +S L+G + V AGTT E L + + E A R R DA+ D Sbjct: 151 ASYRDLAGKRVVVTAGTTNETALRALLARLRLDAQVLTGRDHAESFALLREGRADAFALD 210 Query: 198 ISALYALKLTNDRPSE-HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 L L +LPD +S P + D +V + EL Sbjct: 211 DVLLSGLIAAAGEAGRGFTVLPDKLSFEPYGIMFRKDDPALAGVVDAAFARLAGTREL 268 >gi|148926602|ref|ZP_01810284.1| probable ABC-type amino-acid transporter periplasmic solute-binding protein [Campylobacter jejuni subsp. jejuni CG8486] gi|145845296|gb|EDK22390.1| probable ABC-type amino-acid transporter periplasmic solute-binding protein [Campylobacter jejuni subsp. jejuni CG8486] Length = 264 Score = 185 bits (469), Expect = 1e-44, Method: Composition-based stats. Identities = 60/244 (24%), Positives = 99/244 (40%), Gaps = 10/244 (4%) Query: 2 YKDFF-VSILCL-IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKG 58 K +++ L + F++ + L IK +G L G+ + +A + A G+ KG Sbjct: 9 RKSLLKLAVFALGACVAFSNANAAEGKLESIKSKGQLIVGVKNDVPHYALLDQATGEIKG 68 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 F+VD + L+ I D KI+ + +NAK R L + +D + T R+ + Sbjct: 69 FEVDVAKLLAKNILGDDKKIKLVAVNAKTRGPLLDNGSVDAVIATFTITPERKRIYNFSE 128 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y D G ++ K+K S++ + GA+I V TT+ + K + F Sbjct: 129 --PYYQDAIGLLVLKEKNYKSLADMKGANIGVAQAATTKKAIGKAAKKIGIDVKFSEFPD 186 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 I AA A R DA++ D S L + ILPD + D + Sbjct: 187 YPSIKAALDAKRVDAFSVDKSILLGYV-----DDKSEILPDSFEPQSYGIVTKKDDPAFA 241 Query: 239 NIVS 242 V Sbjct: 242 KYVD 245 >gi|55821171|ref|YP_139613.1| polar amino acid ABC uptake transporter substrate binding protein [Streptococcus thermophilus LMG 18311] gi|55737156|gb|AAV60798.1| polar amino acid ABC uptake transporter substrate binding protein [Streptococcus thermophilus LMG 18311] Length = 277 Score = 185 bits (469), Expect = 1e-44, Method: Composition-based stats. Identities = 61/276 (22%), Positives = 112/276 (40%), Gaps = 23/276 (8%) Query: 7 VSILCLIILFFTSFSTNAS---------ILGDIKKRGFLKCGINTGLVGFAEVKAN-GDW 56 VS++ + T+ T A + I RG L G+ + F A + Sbjct: 13 VSLVIATVFLITNHKTEAEDTSKLLDSKAVQKIVNRGTLNVGVKQDVPNFGYYSAKTNRY 72 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +G +VD + ++ + K+ Y+P+ + R + + ID+L R+ S Sbjct: 73 EGMEVDLAKKIADELR---VKVNYIPVTTQTREPLMDNGTIDLLIGTYTINDERKAS--Y 127 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 A Y D GF++ K GI+ +S L+G +I V G +T+ L +Y AHN+K++ + Sbjct: 128 AISNPYYRDQIGFLVLKDSGINKISDLNGKTIGVAQGASTKAALQEYSSAHNLKFNYVQL 187 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E+ + AHR DA++ D S L + IL + A + + E Sbjct: 188 GSYPELAVSLYAHRVDAFSVDKSILSGY-----ESKKTKILNEGFKTQDYGIASSKSNQE 242 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272 + + ++ G QK ++ + + Sbjct: 243 LIDYTNDLIAKW---QKDGSLQKLYDKYNLKPAKAE 275 >gi|123444361|ref|YP_001008326.1| putative periplasmic solute-binding protein [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122091322|emb|CAL14208.1| putative periplasmic solute-binding protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 284 Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 57/259 (22%), Positives = 95/259 (36%), Gaps = 16/259 (6%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKI 78 + +A L DIK+ G ++ + F + G+DVD A++ + K+ Sbjct: 25 GAAHADKLDDIKQAGVVRIAVFDSNPPFGYIDPQTKKLVGYDVDVANAIAKDLG---VKV 81 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + N R L SK++D+++ N T R + + + GQ FI HK + Sbjct: 82 ELRATNPANRIPLLTSKKVDLIAANFTITDDRAKEVNFSL--PYFATGQKFIAHKG-VLK 138 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + + I GT E+TL D + I ++ A R A T D Sbjct: 139 TPEDIGKLRIGADKGTVQEITLRDRYPTA----KVISYDDTPVAFTALRNGNVQAITQDD 194 Query: 199 SALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 + L L ++ I P I+K I +G+ V+ T V E+ G Sbjct: 195 AKLVGLLGNLPEAQKADFEISPFSITKEYQGIGIPKGEDRLTAEVNETL---VKLEKDGE 251 Query: 257 TQKNINQVSKDTTNPDVQR 275 K ++ T R Sbjct: 252 AAKIYDRWFGPETKAAQPR 270 >gi|221195872|ref|ZP_03568925.1| amino acid transport protein [Atopobium rimae ATCC 49626] gi|221184346|gb|EEE16740.1| amino acid transport protein [Atopobium rimae ATCC 49626] Length = 296 Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 59/289 (20%), Positives = 108/289 (37%), Gaps = 29/289 (10%) Query: 2 YKDFFVSILCLIILFFTSF------------STNAS----ILGDIKKRGFLKCGINTGLV 45 + F + ++ S AS + DIKK G + G + Sbjct: 10 RRAFLAGAASFSTMLLSACDHGGGQTATGGGSAGASDTFRSVDDIKKAGTVNIGYFSDKA 69 Query: 46 GFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105 F V +G G+DV F L+ + + + Y+ + R LQS + DI+ N Sbjct: 70 PFGYVDKDGKPAGYDVVFGNRLAKDLGVEAN---YISTDGLNRVPFLQSNKADIMLANFT 126 Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165 T R + + G + + I SV +L G + V GTT E YF+ Sbjct: 127 VTDERAEKVDFSL--PYMKIKLGIVSPESAVIKSVDELKGKKLIVSKGTTAET----YFE 180 Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225 + + + F+ + A R DA++ D + + A + P V + D+ + Sbjct: 181 KNYPEVTMVKFDSYADAYNALLDGRGDAFSTDNTEVLAWVKS--NPGFVVGVDDLGNADT 238 Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEEL--GITQKNINQVSKDTTNPD 272 +A A+ +G+T ++ + E ++ + V D +P+ Sbjct: 239 IAAAVHKGNTSLLEFINNEITGPLAEENFFHKDYEETLKPVFGDDVDPE 287 >gi|157368266|ref|YP_001476255.1| extracellular solute-binding protein [Serratia proteamaculans 568] gi|157320030|gb|ABV39127.1| extracellular solute-binding protein family 3 [Serratia proteamaculans 568] Length = 279 Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 58/259 (22%), Positives = 98/259 (37%), Gaps = 16/259 (6%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKI 78 + +A L DIKK G ++ + F + G+DVD A+ A+ K+ Sbjct: 20 GAAHADKLDDIKKAGVVRIAVFDSNPPFGYIDPQSKKLVGYDVDVADAIGKALG---VKV 76 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + N R L SK++D+++ N T R + + F + GQ FI HK + Sbjct: 77 ELRATNPANRIPLLVSKKVDLIAANFTITDER--AKEVNFSVPYFATGQKFIAHKG-VLK 133 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + + I GT E+TL +++ I ++ A R A T D Sbjct: 134 TPEDIKKLRIGADKGTVQEITLREHYPTA----KVISYDDTPLAFVALRNGNVQAITQDD 189 Query: 199 SALYALKLTND--RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 + L L + ++ I P I+K I +G+ V+ T + E+ G Sbjct: 190 AKLVGLLGNLPAAQKADFEISPFSITKEYQGVGIPKGEDRLTASVNDTL---IKLEKDGE 246 Query: 257 TQKNINQVSKDTTNPDVQR 275 K ++ T R Sbjct: 247 AAKIYDRWFGPETKTAQPR 265 >gi|126659454|ref|ZP_01730588.1| hypothetical protein CY0110_20820 [Cyanothece sp. CCY0110] gi|126619290|gb|EAZ90025.1| hypothetical protein CY0110_20820 [Cyanothece sp. CCY0110] Length = 299 Score = 184 bits (468), Expect = 2e-44, Method: Composition-based stats. Identities = 55/270 (20%), Positives = 108/270 (40%), Gaps = 15/270 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K F + +L L++ + ++ A IL IK+ G + G + FA + G+W G+ Sbjct: 1 MRKKFVLLVLTLLLAATSQNASWAGEILEKIKETGVITAGTRKDAIPFAYINDEGEWVGY 60 Query: 60 DVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +D + I P +++ + + + RF +++++IDI ++ +T RE + Sbjct: 61 SIDVLEIIRQDIEKKLGKPIQLKLVEVTPQNRFDKVKNREIDIECASSTFTWEREEMVDF 120 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + + G K + ++ L+G I V TT E + A + Sbjct: 121 SVS--YFASGTKIFRKKGSDLGTIDSLAGRRIGVIPNTTNEQAIKIQQPAAI----LVPI 174 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDT 235 + E +A GD L L+L N + ++P+ A I + ++ Sbjct: 175 KDRNEGLEKLNNGEIEAIAGDGIVLQGLRLENGNADKFEVVPEFPYMYEAYACMIPEDES 234 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVS 265 W +V+++ + GI QV Sbjct: 235 AWRGMVNYSLVKFME----GIVSDQPQQVQ 260 >gi|317494652|ref|ZP_07953064.1| extracellular solute-binding protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917254|gb|EFV38601.1| extracellular solute-binding protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 277 Score = 184 bits (468), Expect = 2e-44, Method: Composition-based stats. Identities = 57/252 (22%), Positives = 96/252 (38%), Gaps = 16/252 (6%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQY 80 +A L DI+K G ++ + F V G+DVD A+ A+ K++ Sbjct: 21 AHADKLDDIQKAGVVRVAVFDSNPPFGYVDPQTKKLVGYDVDVADAIGKALG---VKVEL 77 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 N R L SK++D+++ N T R + + F + GQ FI K + Sbjct: 78 RATNPANRIPLLASKKVDLIAANFTITPER--AKEVNFSVPYFRTGQKFIARKG-VLKQP 134 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 ++ I GT E+TL D + I ++ AA R A T D + Sbjct: 135 DDIAKLRIGADKGTVQEITLRDKYPTA----KVISYDDTPLAFAALRNGNVQAITQDDAK 190 Query: 201 LYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 L L ++ I P I+K + +G+ + V+ A+ E+ G + Sbjct: 191 LVGLLANVPDAAKADFEISPFSITKEYQGIGLPKGEDRLTDKVN---TALENLEKEGQAE 247 Query: 259 KNINQVSKDTTN 270 K ++ T Sbjct: 248 KIYDRWFGPETK 259 >gi|118468998|ref|YP_885192.1| extracellular solute-binding protein, family protein 3 [Mycobacterium smegmatis str. MC2 155] gi|118170285|gb|ABK71181.1| Bacterial extracellular solute-binding protein, family protein 3 [Mycobacterium smegmatis str. MC2 155] Length = 322 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 62/263 (23%), Positives = 110/263 (41%), Gaps = 12/263 (4%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDP 75 F++ + + +I+ RG L G++ G F+ G GFDVD +S IF P Sbjct: 69 FSNKEEAEAAVANIRARGRLIVGLDIGSNLFSFRDPITGQITGFDVDIAGEVSRDIFGTP 128 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 SK++Y L++ +R AL++ Q+DI+ + T R+ + + Q + + Sbjct: 129 SKVEYRILSSADRITALRNNQVDIVVKTMTITCERKKLVNF--STVYLMANQRILASRDS 186 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 IS S LSG +CV GTT+ + + + + A + + DA + Sbjct: 187 NISQASDLSGRRVCVVDGTTSLQRIQQISPS----PIIVSVVTWADCLVALQQRQADAVS 242 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE-L 254 D S L L P H++ P +S+ P + +T +V+ T + Sbjct: 243 TDDSILAGLVAQ--DPYLHIVGPS-LSQEPYGIGVNLENTGLVRVVNGTLERIRRDGTWY 299 Query: 255 GITQKNINQVSKDTTNPDVQRFL 277 + +K + V P V R++ Sbjct: 300 TLYRKWL-TVLGPAPAPPVARYV 321 >gi|327390344|gb|EGE88685.1| major cell-binding factor [Streptococcus pneumoniae GA04375] Length = 254 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 55/256 (21%), Positives = 103/256 (40%), Gaps = 14/256 (5%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRAL 67 ++ L L + + DI+KRG L G+ + F G + G + D + + Sbjct: 1 MISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYSGIETDLAKMV 60 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + KI+Y+P+ A+ R L ++Q+D+ T R+ Y D Sbjct: 61 ADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKLYNF--TSPYYTDAS 115 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 GF+++K I + L+G +I V G+ T+ + + K +K+ + E+ + Sbjct: 116 GFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVELGSYPELITSLH 175 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 AHR DA++ D S L +L D S + +TE+ + + Sbjct: 176 AHRIDAFSVDRSILSGYTSK-----RTALLDDSFKPSDYGIVTKKSNTEFNDYLDNLVTK 230 Query: 248 MVTAEELGITQKNINQ 263 + G QK ++ Sbjct: 231 W---SKDGSLQKLYDR 243 >gi|312278469|gb|ADQ63126.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus thermophilus ND03] Length = 277 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 61/274 (22%), Positives = 105/274 (38%), Gaps = 20/274 (7%) Query: 7 VSILCLIILFFTSFSTNAS---------ILGDIKKRGFLKCGINTGLVGFAEVKAN-GDW 56 VS++ + T T A + I RG L G+ + F A + Sbjct: 13 VSLVIATVFLITIHKTEAEDTSKLLDSKAVQKIVNRGTLNVGVKQDVPNFGYYSAKTNRY 72 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +G +VD + ++ + K+ Y+P+ + R + + ID+L R+ S Sbjct: 73 EGMEVDLAKKIADEL---KVKVNYIPVTTQTREPLMDNGTIDLLIGTYTINDERKAS--Y 127 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 A Y D GF++ K GI+ +S L+G +I V G +T+ L +Y AHN+K++ + Sbjct: 128 AISNPYYHDQIGFLVLKDSGINKISDLNGKTIGVAQGASTKAALQEYASAHNLKFNYVQL 187 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E+ + AHR DA++ D S L + IL + A + + E Sbjct: 188 GSYPELAVSLYAHRVDAFSVDKSILSGY-----ESKKTKILNEGFKTQDYGIASSKSNQE 242 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 + + L N N Sbjct: 243 LIDYTNDLIAKWQKDVSLQKLYDKYNLKPAKAEN 276 >gi|299068311|emb|CBJ39535.1| Amino-acid ABC transporter binding protein ybeJ [Ralstonia solanacearum CMR15] Length = 288 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 47/269 (17%), Positives = 101/269 (37%), Gaps = 12/269 (4%) Query: 10 LCLIILFFTSFSTNASI--LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 + + L ++ AS L I+ G ++ V F+ + G G+ +D C + Sbjct: 1 MLAVPLAVSAVHAMASTPTLDRIRDTGTIRLAYREDSVPFSYMDG-GKPIGYSIDICSRV 59 Query: 68 SSAI----FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 AI K+QYLP+ A R + S + D+ +T+ R + Y Sbjct: 60 VDAIRTSLKRPDLKVQYLPVTAVNRMDTIASGKADLECGSTNNAPERREKVAFTI--PHY 117 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 ++ G+ L G ++ G++ + A + + ++ Sbjct: 118 ITKGRMLVKASSGLQQWEDLHGKTVVAARGSSASDVMHKLNDATGLGMRAVDTNDLKTAF 177 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 + + DA+ GD L ++ T+D P+++V+ S A + + D ++ +V Sbjct: 178 SMLSTGKADAFAGDDVLLAGMRATSDNPTDYVVAGKTQLVSSYAMMMSKQDADFKKLVDQ 237 Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPD 272 + ++ E+ K + + P+ Sbjct: 238 SMTRLIVDGEV---SKLYKKWFQQPIPPN 263 >gi|187924805|ref|YP_001896447.1| extracellular solute-binding protein family 3 [Burkholderia phytofirmans PsJN] gi|187715999|gb|ACD17223.1| extracellular solute-binding protein family 3 [Burkholderia phytofirmans PsJN] Length = 324 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 50/274 (18%), Positives = 91/274 (33%), Gaps = 16/274 (5%) Query: 8 SILCLIILFFTSFSTNASI------LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 +++ L S + +A L I G + G+ + F+ G G+ Sbjct: 31 ALVALTTFGAASLACSAQTDELTGTLRKIHDDGVVVLGVREASIPFSYFDGKGT-VGYSQ 89 Query: 62 DFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 + + K+ + + + R L + QID+ +T T+ RE + Sbjct: 90 TIALQIVEEIKKTLGMPQLKVHEITVTSSNRTPMLLNNQIDLECGSTTHTVERENLAAFS 149 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y I K GI+ L+G ++ AGT+ E L + Sbjct: 150 NSFFQY--AVRMIARKNAGITDFQDLAGKAVVTTAGTSDERLLRRLNTDKLLNMRITSAR 207 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E + R A+ D +Y K T+ RP + V+ + A +GD + Sbjct: 208 DHSEAFNTLKDGRAVAFVMDEPIVYGFKSTDPRPDDFVVTGTPLGYEVYACMFRKGDEPF 267 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 +V+ T+ E ++ Q P Sbjct: 268 RTLVNGVIARGQTSGE---AERLYRQWFTQPIPP 298 >gi|312959230|ref|ZP_07773748.1| extracellular solute-binding protein, family 3 [Pseudomonas fluorescens WH6] gi|311286490|gb|EFQ65053.1| extracellular solute-binding protein, family 3 [Pseudomonas fluorescens WH6] Length = 331 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 45/249 (18%), Positives = 88/249 (35%), Gaps = 12/249 (4%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSK----IQ 79 L I G + + F+ + +G G+ D A+ + D +K ++ Sbjct: 51 GTLKKINDSGTITLAHRDSSIPFSYIADGSGKPVGYSHDIQVAVVDQLKKDLNKPDLKVK 110 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--- 136 Y + ++ R +Q+ D+ +T R + + G ++ K K Sbjct: 111 YNLVTSQTRIPLIQNGTADLECGSTTNNAERAQQVDFTTNI--FEIGTRLLVKKDKDGKP 168 Query: 137 -ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 + + L G ++ AGTT+E + M + I + E + R A+ Sbjct: 169 SYADFADLKGKNVVTTAGTTSERIIKAMNADKQMGMNVISAKDHGESFQMLESGRAVAFM 228 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D + L + +P + VI S A + +GD ++ V A+ + E+ Sbjct: 229 MDDALLAGEEAKAKKPDDWVITGTPQSFEAYACMVRKGDPDFKKAVDDAIVALYKSGEIN 288 Query: 256 -ITQKNINQ 263 I K Sbjct: 289 KIYSKWFES 297 >gi|295426474|ref|ZP_06819124.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus amylolyticus DSM 11664] gi|295063842|gb|EFG54800.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus amylolyticus DSM 11664] Length = 271 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 54/282 (19%), Positives = 112/282 (39%), Gaps = 17/282 (6%) Query: 1 MYK--DFFVSILCLIILFFTSFST--NASILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55 M K + +L +++F + T N + +K+ + GI F G Sbjct: 1 MKKLKKIILLMLGFMMVFALAGCTKKNDNTYEHVKQSKTIVWGIRADTRLFGLTNIKTGK 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +GF++D +AL+ + + ++L A R L++ +D + T R + Sbjct: 61 IEGFEIDLAKALTKQMLGSSAHAEFLTTTANTRIPLLKNHNVDAVLATMTITKERAKQVD 120 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + G ++ I++V QL+G ++ GTT + Y + Sbjct: 121 F--TNPYFPAGSSLLVPNSSKITNVKQLNGKTVLAVKGTTAVDDVHKYAPKA----KVLQ 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 ++ + +A +A + A T D L + N + ++ + + +P AI +G T Sbjct: 175 YDDYGQAMSALKAGQGVALTTDNGLLAGIAQENPG---YKLVGGVYTNAPYGIAINKGQT 231 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277 + +V+ + A+ ++ G + IN+ K DV+ L Sbjct: 232 Q---MVNHLNTALAELKKNGTYNRLINKWFKGIPGFDVKELL 270 >gi|318608046|emb|CBY29544.1| putative periplasmic solute-binding protein [Yersinia enterocolitica subsp. palearctica Y11] gi|330861768|emb|CBX71941.1| hypothetical protein YEW_BV07660 [Yersinia enterocolitica W22703] Length = 284 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 58/259 (22%), Positives = 96/259 (37%), Gaps = 16/259 (6%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKI 78 + +A L DIKK G ++ + F + + G+DVD A++ + K+ Sbjct: 25 GAAHADKLDDIKKEGVVRIAVFDSNPPFGYIDPHTKKLVGYDVDVANAIAKDLG---VKV 81 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + N R L SK++D+++ N T R + + + GQ FI HK + Sbjct: 82 ELRATNPANRIPLLTSKKVDLIAANFTITDDRAKEVNFSL--PYFATGQKFIAHKG-VLK 138 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + + I GT E+TL D + I ++ A R A T D Sbjct: 139 TPEDIGKLRIGADKGTVQEITLRDRYPTA----KVISYDDTPVAFTALRNGNVQAITQDD 194 Query: 199 SALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 + L L ++ I P I+K I +G+ V+ T V E+ G Sbjct: 195 AKLVGLLGNLPEAQKADFEISPFSITKEYQGIGIPKGEDRLTAEVNETL---VKLEKDGE 251 Query: 257 TQKNINQVSKDTTNPDVQR 275 K ++ T R Sbjct: 252 AAKIYDRWFGPETKAAQPR 270 >gi|160899853|ref|YP_001565435.1| extracellular solute-binding protein [Delftia acidovorans SPH-1] gi|160365437|gb|ABX37050.1| extracellular solute-binding protein family 3 [Delftia acidovorans SPH-1] Length = 297 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 47/269 (17%), Positives = 96/269 (35%), Gaps = 9/269 (3%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRAL 67 L + L S + A +L ++ G L V F+ + +G G+ +D C L Sbjct: 9 ALGALGLSALSCVSAAGVLDKVQAGGALVIAHRESSVPFSYIDTRSGKPVGYALDLCLRL 68 Query: 68 SSAI----FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 + A+ K+++L + R ++ + D+ +T R ++ + Sbjct: 69 AEAVRKQTGRKDMKVEFLMVTPANRMAVIEQGKADMECGSTTNNAQRRQTVAF--TVPHF 126 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 G ++ I+++ L G + GT+ + + M + Sbjct: 127 ITGARMLVKADSTINAMEDLKGKKLVSTKGTSPMALVTQANRQRLMGITIVEAPDHARAL 186 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 DA+ D L L P ++ +S PLA + + DT + +V Sbjct: 187 EMVEKGEADAFVMDDVLLNGLAAARPDPRALKVVGKFLSTEPLAIMLPKADTAFKKLVDE 246 Query: 244 THYAMVTAEE-LGITQKNI-NQVSKDTTN 270 ++T+ E I +K + ++TN Sbjct: 247 EMKRIITSREIHPIYEKWFLQPIPPNSTN 275 >gi|22127993|ref|NP_671416.1| solute-binding periplasmic protein precursor for ABC transporter [Yersinia pestis KIM 10] gi|45443741|ref|NP_995280.1| putative periplasmic solute-binding protein [Yersinia pestis biovar Microtus str. 91001] gi|51598241|ref|YP_072432.1| ABC transporter, periplasmic amino acid binding protein [Yersinia pseudotuberculosis IP 32953] gi|108814128|ref|YP_649895.1| periplasmic solute-binding protein [Yersinia pestis Nepal516] gi|145601162|ref|YP_001165238.1| periplasmic solute-binding protein [Yersinia pestis Pestoides F] gi|150260955|ref|ZP_01917683.1| putative periplasmic solute-binding protein [Yersinia pestis CA88-4125] gi|162421777|ref|YP_001608461.1| polar amino acid ABC transporter periplasmic amino acid-binding protein [Yersinia pestis Angola] gi|165926129|ref|ZP_02221961.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165939968|ref|ZP_02228505.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Yersinia pestis biovar Orientalis str. IP275] gi|166009662|ref|ZP_02230560.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166213331|ref|ZP_02239366.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167422854|ref|ZP_02314607.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425515|ref|ZP_02317268.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167468126|ref|ZP_02332830.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Yersinia pestis FV-1] gi|170026441|ref|YP_001722946.1| extracellular solute-binding protein [Yersinia pseudotuberculosis YPIII] gi|186897480|ref|YP_001874592.1| extracellular solute-binding protein [Yersinia pseudotuberculosis PB1/+] gi|218931087|ref|YP_002348962.1| putative periplasmic solute-binding protein [Yersinia pestis CO92] gi|229839819|ref|ZP_04459978.1| putative periplasmic solute-binding protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229841904|ref|ZP_04462060.1| putative periplasmic solute-binding protein [Yersinia pestis biovar Orientalis str. India 195] gi|229896781|ref|ZP_04511944.1| putative periplasmic solute-binding protein [Yersinia pestis Pestoides A] gi|229904669|ref|ZP_04519780.1| putative periplasmic solute-binding protein [Yersinia pestis Nepal516] gi|270488380|ref|ZP_06205454.1| bacterial extracellular solute-binding protein, family 3 [Yersinia pestis KIM D27] gi|294505634|ref|YP_003569696.1| putative periplasmic solute-binding protein [Yersinia pestis Z176003] gi|21961140|gb|AAM87667.1|AE014014_1 putative solute-binding periplasmic protein precursor for ABC transporter [Yersinia pestis KIM 10] gi|45438611|gb|AAS64157.1| putative periplasmic solute-binding protein [Yersinia pestis biovar Microtus str. 91001] gi|51591523|emb|CAH23195.1| ABC transporter, periplasmic amino acid binding protein [Yersinia pseudotuberculosis IP 32953] gi|108777776|gb|ABG20295.1| periplasmic solute-binding protein [Yersinia pestis Nepal516] gi|115349698|emb|CAL22679.1| putative periplasmic solute-binding protein [Yersinia pestis CO92] gi|145212858|gb|ABP42265.1| periplasmic solute-binding protein [Yersinia pestis Pestoides F] gi|149290363|gb|EDM40440.1| putative periplasmic solute-binding protein [Yersinia pestis CA88-4125] gi|162354592|gb|ABX88540.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Yersinia pestis Angola] gi|165912094|gb|EDR30734.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Yersinia pestis biovar Orientalis str. IP275] gi|165921989|gb|EDR39166.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165991584|gb|EDR43885.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166205629|gb|EDR50109.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166958246|gb|EDR55267.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167055529|gb|EDR65322.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169752975|gb|ACA70493.1| extracellular solute-binding protein family 3 [Yersinia pseudotuberculosis YPIII] gi|186700506|gb|ACC91135.1| extracellular solute-binding protein family 3 [Yersinia pseudotuberculosis PB1/+] gi|229678787|gb|EEO74892.1| putative periplasmic solute-binding protein [Yersinia pestis Nepal516] gi|229691243|gb|EEO83296.1| putative periplasmic solute-binding protein [Yersinia pestis biovar Orientalis str. India 195] gi|229696185|gb|EEO86232.1| putative periplasmic solute-binding protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700219|gb|EEO88255.1| putative periplasmic solute-binding protein [Yersinia pestis Pestoides A] gi|262363799|gb|ACY60520.1| putative periplasmic solute-binding protein [Yersinia pestis D106004] gi|262367735|gb|ACY64292.1| putative periplasmic solute-binding protein [Yersinia pestis D182038] gi|270336884|gb|EFA47661.1| bacterial extracellular solute-binding protein, family 3 [Yersinia pestis KIM D27] gi|294356093|gb|ADE66434.1| putative periplasmic solute-binding protein [Yersinia pestis Z176003] gi|320017443|gb|ADW01015.1| putative periplasmic solute-binding protein [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 284 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 55/255 (21%), Positives = 98/255 (38%), Gaps = 16/255 (6%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSK 77 S + A L DIK+ G ++ + F + G+DVD A++ + K Sbjct: 24 SGTAYADKLDDIKQAGVVRIAVFDSNPPFGYIDPQTKKLVGYDVDVANAIAKDLG---VK 80 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++ N R L SK++D+++ N T R + + + GQ FI K + Sbjct: 81 VELRATNPANRIPLLASKKVDLIAANFTITDERAKEVNFSL--PYFATGQKFIARKG-VL 137 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + + I GT E+TL +++ I ++ A R A T D Sbjct: 138 KTPEDIGKLRIGADKGTVQEITLREHYPTA----KVISYDDTPLAFTALRNGNVQAITQD 193 Query: 198 ISALYALK--LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + L L + + ++ I P I+K I +G+ +V+ T + E+ G Sbjct: 194 DAKLVGLLGNIPEAQKADFEISPFSITKEYQGVGIPKGEDRLTAVVNETL---IKLEKEG 250 Query: 256 ITQKNINQVSKDTTN 270 K ++ TN Sbjct: 251 DAVKIYDRWFGPETN 265 >gi|300362124|ref|ZP_07058301.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus gasseri JV-V03] gi|300354743|gb|EFJ70614.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus gasseri JV-V03] Length = 273 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 44/279 (15%), Positives = 99/279 (35%), Gaps = 17/279 (6%) Query: 1 MYKDF----FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55 M + ++L + L ++ ++KK + G+ F + G Sbjct: 1 MKRKLRIFSLFTVLLSVFLLSACQKNTRNVYQEVKKSNEITWGVKADTRLFGLMSIKTGK 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +GF+VD AL+ + +K ++ AK + L++ ID + T R+ + Sbjct: 61 IEGFEVDLANALTKEMLGKNAKASFVQTTAKTKIPLLKNGNIDAVLAAMTITTERKKQID 120 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 ++ GQ ++ + I +V L+G GTT + + + Sbjct: 121 F--SNPYFYAGQSLLVKEDSSIRNVQDLNGKIALAVKGTTAVANVKKFAPKA----KVLE 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F+ + A +A + A T D L + N + ++ + P A+ +G Sbjct: 175 FDDYGQAFTALKAGQGQAMTTDNGLLAGIATENKG---YKLVGGTYTNEPYGIAVNKGQK 231 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 + N ++ ++ G + + +++ Sbjct: 232 QMKNAINRALN---KLKKDGTYNALVKKWFSGIPGFNIK 267 >gi|282851032|ref|ZP_06260406.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus gasseri 224-1] gi|282557984|gb|EFB63572.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus gasseri 224-1] Length = 252 Score = 183 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 43/257 (16%), Positives = 94/257 (36%), Gaps = 14/257 (5%) Query: 1 MYKDF----FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55 M + +IL + L ++ ++K+ + G+ F + G Sbjct: 1 MKRKLRIFSLFTILLSVFLLSACRKNTRNVYQEVKRSNEITWGVKADTRLFGLMSIKTGK 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +GF+VD AL+ + +K ++ AK + L++ ID + T R+ + Sbjct: 61 IEGFEVDLANALTKEMLGKDAKANFVQTTAKTKIPLLKNGNIDAVLAAMTITPERKKQID 120 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + ++ GQ ++ + I +V L+G + GTT + + + Sbjct: 121 FSE--PYFYAGQSLLVKEDSTIKNVQDLNGKTALAVKGTTAVANVKKFAPKA----KVLE 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F+ + A +A + A T D L + N + ++ + P A+ +G Sbjct: 175 FDDYGQAFTALKAGQGQAMTTDNGLLAGIATENKG---YKLVGGTYTNEPYGIAVNKGQK 231 Query: 236 EWYNIVSWTHYAMVTAE 252 + N ++ + Sbjct: 232 QMKNAINRALNKLKKMG 248 >gi|301793800|emb|CBW36191.1| putative glutamine-binding protein precursor [Streptococcus pneumoniae INV104] Length = 254 Score = 183 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 55/256 (21%), Positives = 102/256 (39%), Gaps = 14/256 (5%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRAL 67 ++ L L + + DI+KRG L G+ + F G + G + D + + Sbjct: 1 MISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYSGIETDLAKMV 60 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + KI+Y+P+ A+ R L ++Q+D+ T R+ Y D Sbjct: 61 ADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKLYNF--TSPYYTDAS 115 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 GF+++K I + L+G +I V G+ T+ + + K +K+ + E+ + Sbjct: 116 GFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVELGSYPELITSLH 175 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 AHR DA++ D S L +L D S + +TE + + Sbjct: 176 AHRIDAFSVDRSILSGYTSK-----RTELLDDSFKPSDYGIVTKKSNTELNDYLDNLVTK 230 Query: 248 MVTAEELGITQKNINQ 263 + G QK ++ Sbjct: 231 W---SKDGSLQKLYDR 243 >gi|315640804|ref|ZP_07895904.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus italicus DSM 15952] gi|315483416|gb|EFU73912.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus italicus DSM 15952] Length = 268 Score = 183 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 54/271 (19%), Positives = 111/271 (40%), Gaps = 18/271 (6%) Query: 1 MYKDFFVSILCLIILFF----TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55 M K + + +L ++ +S + + IL K+ + G+ F + ++ + Sbjct: 1 MKKIYTMLLLLATVITLGACKSSSAASQDILTTAKETNQIVWGVKNDTKLFGLMDISSRE 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 KGFD+D +A++ I ++ + +K R L++ ID + T R+ + Sbjct: 61 VKGFDIDIAKAITEEILGRDGNAVFVEVTSKTRIPLLKNGNIDAIIATMTITDERKKQVD 120 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + + GQ ++ K I++V L + ++ V G+T+ AD + + Sbjct: 121 F--SDVYFDAGQSLLVAKGSPITNVKDLTANDTVLVVKGSTS----ADNIRKAAPDVKVL 174 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 E E A +A + DA + D + L + ND + ++ + P AI +G Sbjct: 175 EMENYSEAFTALQAGQGDAVSTDNAILLGMASENDN---YTLVGGTFTNEPYGIAINKGQ 231 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 + N V+ A+ T + G K ++ Sbjct: 232 ESFLNAVND---ALRTLDTNGTYDKIYDKWF 259 >gi|331002715|ref|ZP_08326230.1| hypothetical protein HMPREF0491_01092 [Lachnospiraceae oral taxon 107 str. F0167] gi|330407128|gb|EGG86632.1| hypothetical protein HMPREF0491_01092 [Lachnospiraceae oral taxon 107 str. F0167] Length = 283 Score = 183 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 59/295 (20%), Positives = 109/295 (36%), Gaps = 26/295 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-----------ILGDIKKRGFLKCGINTGLVGFAE 49 M K + +L ++ + S S L +IKK G + G+ + F Sbjct: 1 MKKGKLIGLLGILTAGVLALSACGSSSKQAGKNNFRTLDEIKKSGTINIGVFSDKHPFGY 60 Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 V NG+++G+D+ F L+ + KI Y+ A R L++ ++DI+ N T Sbjct: 61 VDENGEYQGYDIYFGNRLAEDLG---VKINYVSTEAANRVEYLETGKVDIILANFTVTPE 117 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKAHN 168 R ++ A G G I +K ++S+ + + V +GTT E Y + Sbjct: 118 RAEAVDFAL--PYMNVGLGVISSEKDAVASLDNWNADDEMIVISGTTAEP----YMTKNY 171 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 ++ A A+ D + + A N P V + + +AP Sbjct: 172 PNIKLQKYDTYANAKNALLNGTGKAWVNDNTEVIAFA--NSNPGYVVGIDSLGVNDTIAP 229 Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSS 283 A+ +G++ W + + + K+ + DT L I+ Sbjct: 230 AVTKGNSSLLE---WINTEIENLGKENFFHKDYEETLTDTYGSAYADTLVIEGGK 281 >gi|134098327|ref|YP_001103988.1| putative glutamate binding protein [Saccharopolyspora erythraea NRRL 2338] gi|291004253|ref|ZP_06562226.1| putative glutamate binding protein [Saccharopolyspora erythraea NRRL 2338] gi|133910950|emb|CAM01063.1| putative glutamate binding protein [Saccharopolyspora erythraea NRRL 2338] Length = 299 Score = 183 bits (466), Expect = 3e-44, Method: Composition-based stats. Identities = 49/257 (19%), Positives = 95/257 (36%), Gaps = 10/257 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPS-KIQYL 81 + IK+RG + G+ G G + GFD++ R +++ + DP+ I Y Sbjct: 49 SPTFDRIKQRGRVTVGVKEDQPGLGFRDPVTGQYSGFDIEIARLVAAQLGLDPNTAIDYK 108 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSV 140 P+ + R AL + ++D R+ +G A + GQ ++ K I+ Sbjct: 109 PIPSTAREQALATGEVDYYVGTYTINDKRKEQVGFA--GPYFMAGQDVLVRKDNTDITGP 166 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L G +C G+T + + + + + F+R E + DA T D + Sbjct: 167 ETLKGKKVCSATGSTPIQRVKE--QQLTEPQNIVEFQRYSECVQQLLDGQIDAVTTDDAI 224 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQK 259 L P + ++ S+ P + + D N ++ + E + Sbjct: 225 LKGYAAQ--DPDKLKVVGKTFSEEPYGIGVAKDDIALRNKINDVLEQAAKSGEWKRVYDA 282 Query: 260 NINQVSKDTTNPDVQRF 276 + + P V R+ Sbjct: 283 TLGKSGTGAEPPPVDRY 299 >gi|226362770|ref|YP_002780548.1| ABC transporter substrate-binding protein [Rhodococcus opacus B4] gi|226241255|dbj|BAH51603.1| putative ABC transporter substrate-binding protein [Rhodococcus opacus B4] Length = 325 Score = 183 bits (466), Expect = 3e-44, Method: Composition-based stats. Identities = 54/247 (21%), Positives = 95/247 (38%), Gaps = 13/247 (5%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 + S L I+ RG L G + F+ G GFD+D R ++ +F DPSK++ Sbjct: 76 APPGSALAAIRARGRLIVGTDQNTNLFSFRDPKTGTLSGFDIDLAREIARDLFGDPSKVE 135 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 + L + RF AL+ +D++ T T R +G + + Q ++ + GISS Sbjct: 136 FRLLTSAGRFDALERNDVDLVVHATSITCERAARVGF--SSVYFEAFQRLLVPEGSGISS 193 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L+G +C TT+ T+ + ++ + + DA T D S Sbjct: 194 PTDLAGKRVCTFIDTTSLATIQRVSPEA----TIVAVPDWDDCLTTLQLGQADAATTDNS 249 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L L + I+ + P + + V+ T M E G + Sbjct: 250 ILAGLAAQDPN---LEIVGPNLELEPYGVVANKNNDALVRFVNGTLERM---REDGTWNR 303 Query: 260 NINQVSK 266 ++ Sbjct: 304 LYDRWLG 310 >gi|75906997|ref|YP_321293.1| extracellular solute-binding protein [Anabaena variabilis ATCC 29413] gi|75700722|gb|ABA20398.1| amino acid ABC transporter substrate-binding protein, PAAT family [Anabaena variabilis ATCC 29413] Length = 303 Score = 183 bits (465), Expect = 3e-44, Method: Composition-based stats. Identities = 50/294 (17%), Positives = 109/294 (37%), Gaps = 21/294 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 MYK+ +++ L + + + + + G L G + + FA A G G+ Sbjct: 3 MYKNLAIALFSLTLTTVIPDAAFGETVMQKVARTGVLTAGTSRDAMPFAYTNAQGQLTGY 62 Query: 60 DVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 VD + + +++ + L +R + ++Q+DI+ + +T R+ + Sbjct: 63 SVDMLSVIKQQLEKELGKKIQLKLVALTPAQRIPKIVNQQVDIVCDASSFTWERDKKVDF 122 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + G ++ + S L G I V A TT E + + Y Sbjct: 123 SVSYGA--TGTQLLVKSGSNLGSPESLIGKRIGVLAQTTNEQAIKRVQPQAKLVY----L 176 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDT 235 + E A + + DA++ D L + P + I+PD S+ +A + + ++ Sbjct: 177 KSRSEGYTALQEGKIDAFSSDSILLESWLQKAKNPDDFAIVPDRPYSREGIACMVPENNS 236 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEAL 289 ++ + V+++ + G + T + R+ G + L Sbjct: 237 KFLDAVNYSLVKFMQGFVNG------DTRYVTTFD----RWFGAKGVVLLNRDL 280 >gi|296162377|ref|ZP_06845170.1| extracellular solute-binding protein family 3 [Burkholderia sp. Ch1-1] gi|295887410|gb|EFG67235.1| extracellular solute-binding protein family 3 [Burkholderia sp. Ch1-1] Length = 273 Score = 183 bits (465), Expect = 3e-44, Method: Composition-based stats. Identities = 55/264 (20%), Positives = 99/264 (37%), Gaps = 8/264 (3%) Query: 1 MYKDFFVSILCLIILFFTSFS--TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K + +L L +L F S A L +K RG L GI V F + + G G Sbjct: 1 MSKRSWWVVLMLFVLGFGGLSGGARADELEMVKARGKLIVGIRNDYVPFGYLDSKGQLVG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 F+VD ++ +F + I+++P+ A R L + +ID++ R + Sbjct: 61 FEVDLASFVAKDLFGSETAIEFVPVVASNRIELLNAGRIDVIFATLGKNPDRAKVIDFTN 120 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 P G + K I+ L G +C G L + A ++F Sbjct: 121 -PYYMMAGMVLLAPKNTTIAKWEDLKGRKVCGSQGNMYNRALQEKLGA-----DTVLFTA 174 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + A++ +RC+A D L + + I + P+A + + + ++ Sbjct: 175 TAPMYKAFQDNRCEAIAYDGPNLTLKVNEDGWKDKDKITLEAYEYVPIAGGVRKNEPKFL 234 Query: 239 NIVSWTHYAMVTAEELGITQKNIN 262 ++ + A L +K N Sbjct: 235 AALNQSIRKAEAAGVLVNAEKTYN 258 >gi|148983989|ref|ZP_01817308.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP3-BS71] gi|147924136|gb|EDK75248.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP3-BS71] gi|301799655|emb|CBW32215.1| putative glutamine-binding protein precursor [Streptococcus pneumoniae OXC141] Length = 254 Score = 183 bits (465), Expect = 3e-44, Method: Composition-based stats. Identities = 55/256 (21%), Positives = 101/256 (39%), Gaps = 14/256 (5%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRAL 67 ++ L L + + DI+KRG L G+ + F G + G + D + + Sbjct: 1 MISLFGLVAAKPVQANTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYSGIETDLAKMV 60 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + KI Y+P+ A+ R L ++Q+D+ T R+ Y D Sbjct: 61 ADEL---KVKIHYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKLYNF--TSPYYTDAS 115 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 GF+++K I + L+G +I V G+ T+ + + K +K+ + E+ + Sbjct: 116 GFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVELGSYPELITSLH 175 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 AHR DA++ D S L +L D S + +TE + + Sbjct: 176 AHRIDAFSVDRSILSGYTSK-----RTELLDDSFKPSDYGIVTKKSNTELNDYLDNLVTK 230 Query: 248 MVTAEELGITQKNINQ 263 + G QK ++ Sbjct: 231 W---SKDGSLQKLYDR 243 >gi|218507985|ref|ZP_03505863.1| polar amino acid ABC transport substrate-binding protein, aapJ-2 [Rhizobium etli Brasil 5] Length = 189 Score = 183 bits (465), Expect = 3e-44, Method: Composition-based stats. Identities = 65/171 (38%), Positives = 96/171 (56%), Gaps = 1/171 (0%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 L IK+RG +K G+ T GF + G W+GF VDF RAL+ +F+D K+++ Sbjct: 20 AGQTLDKIKERGVIKVGVGTT-PGFFTPDSTGRWQGFFVDFGRALAVTVFNDDDKVEFTN 78 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++R ALQ+ + DIL T+ R LG F P+ ++DGQG ++ K G++ + Sbjct: 79 SSPQQRLPALQAGEFDILLSGVTETITRAFKLGFHFGPVVFYDGQGLLVRKDLGVAKGEE 138 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 L GA+I VQ+GTT EL +AD+F+ K+ PI E E A R DA Sbjct: 139 LDGATIGVQSGTTGELNIADFFRKTGKKFTPITIEETSEFTKALDTGRVDA 189 >gi|227355083|ref|ZP_03839494.1| ABC superfamily ATP binding cassette transporter, binding protein [Proteus mirabilis ATCC 29906] gi|227164870|gb|EEI49717.1| ABC superfamily ATP binding cassette transporter, binding protein [Proteus mirabilis ATCC 29906] Length = 279 Score = 183 bits (465), Expect = 3e-44, Method: Composition-based stats. Identities = 58/273 (21%), Positives = 101/273 (36%), Gaps = 17/273 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59 M + L + F+ A L DIK+ G ++ I F + G+ Sbjct: 1 MKLRVLATALIAGSVLFSGL-AKADKLDDIKQAGVVRIAIFDSNPPFGFIDPQTKKLAGY 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D D ++ + K++ P N R L +K++D+++ N T R + Sbjct: 60 DADIANEIAKDLG---VKLELRPTNPANRIPLLNAKKVDLIAANFTITEERAKQVDF--S 114 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ FI K ++S Q++ I GT E+TL + + I ++ Sbjct: 115 VPYFATGQKFIARKG-VLTSPEQIASLRIGADKGTVQEITLRERYPET----KVISYDDT 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEW 237 AA R A T D + L L ++ I P I++ A A +G+ Sbjct: 170 PLAFAALRNGNVQAITQDDAKLVGLLANLPEKIKADFEISPFSITREYQAVAAAKGEQRL 229 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 N ++ T + E+ G + N+ T Sbjct: 230 INEINNTL---LRLEKEGKADEIYNRWFGPDTK 259 >gi|329117390|ref|ZP_08246107.1| bifunctional adhesin/ABC transporter aspartate/glutamate-binding protein [Streptococcus parauberis NCFD 2020] gi|326907795|gb|EGE54709.1| bifunctional adhesin/ABC transporter aspartate/glutamate-binding protein [Streptococcus parauberis NCFD 2020] Length = 271 Score = 183 bits (465), Expect = 4e-44, Method: Composition-based stats. Identities = 46/234 (19%), Positives = 100/234 (42%), Gaps = 11/234 (4%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 + I+K G ++ G+ + F G ++G +V+ + ++ ++ K ++ + A Sbjct: 37 IKKIQKAGIIRVGVKQDVPNFGYYSPDTGKYEGMEVEIAKDIAKSLG---VKAEFTAVTA 93 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 + R L + Q+D++ T R+ +F Y D GF+++K G S+ L+ Sbjct: 94 QTREALLDNGQLDMIIATYTITPERQA--NYSFSKPYYLDEVGFLVNKSDGFKSIKSLNN 151 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 +I V G+TT++ + ++ KA+N+ + + E+ + + R A++ D S L + Sbjct: 152 KTIGVAQGSTTKVAIEEFGKANNLHFKFVQLGSYPELAISLYSTRISAFSVDKSILTGYQ 211 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 + IL D ++ A + + N ++ L K Sbjct: 212 SK-----QTQILSDGFNQQAYGIASTKANKNLTNYINDLISNWQKDGHLKAIYK 260 >gi|148269469|ref|YP_001243929.1| extracellular solute-binding protein [Thermotoga petrophila RKU-1] gi|147735013|gb|ABQ46353.1| extracellular solute-binding protein, family 3 [Thermotoga petrophila RKU-1] Length = 246 Score = 183 bits (465), Expect = 4e-44, Method: Composition-based stats. Identities = 52/265 (19%), Positives = 108/265 (40%), Gaps = 21/265 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V +L + I+ F+ + +IK RG+L G++ F V NG+ GFD Sbjct: 1 MKKLLVVLVLLVSIVIFSG------TIDEIKSRGYLLVGLSADFPPFEFVDENGNIAGFD 54 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + ++ + + ++ + + +L +K+ID++ T R+ + Sbjct: 55 VDLAKEIARRLGVE---LKIVDMTFDGLIPSLLTKKIDVIISGMTITEERKKVVAF--SD 109 Query: 121 ITYFDGQGFIMHKKKGI--SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + GQ ++ K + L G ++ VQ GTT ++ ++ Y + F++ Sbjct: 110 PYFDAGQVIVVRKDSDFRPKTYEDLVGKTVAVQIGTTGDIEVSKY-----EGIKVVRFDK 164 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + + R DA D + A N + VI ++S A+ + DT+ Sbjct: 165 FTDAFLELKRGRADAVVLDSATARAFVAKNP---DLVISSGVLSSEQYGIAVRKEDTDLL 221 Query: 239 NIVSWTHYAMVTAEELGITQKNINQ 263 ++ + + + +K ++ Sbjct: 222 EFINSVLRELKKSPYDVLIEKWFSE 246 >gi|197286727|ref|YP_002152599.1| amino acid ABC transporter substrate-binding protein [Proteus mirabilis HI4320] gi|194684214|emb|CAR45712.1| putative amino acid ABC transporter, substrate-binding protein [Proteus mirabilis HI4320] Length = 279 Score = 183 bits (464), Expect = 4e-44, Method: Composition-based stats. Identities = 58/273 (21%), Positives = 101/273 (36%), Gaps = 17/273 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59 M + L + F+ A L DIK+ G ++ I F + G+ Sbjct: 1 MKLRVLATALIAGSVLFSGL-AKADKLDDIKQAGVVRIAIFDSNPPFGFIDPQTKKLAGY 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D D ++ + K++ P N R L +K++D+++ N T R + Sbjct: 60 DADIANEIAKDLG---VKLELRPTNPANRIPLLSAKKVDLIAANFTITEERAKQVDF--S 114 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ FI K ++S Q++ I GT E+TL + + I ++ Sbjct: 115 VPYFATGQKFIARKG-VLTSPEQIASLRIGADKGTVQEITLRERYPET----KVISYDDT 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEW 237 AA R A T D + L L ++ I P I++ A A +G+ Sbjct: 170 PLAFAALRNGNVQAITQDDAKLVGLLANLPEKIKADFEISPFSITREYQAVAAAKGEQRL 229 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 N ++ T + E+ G + N+ T Sbjct: 230 INEINNTL---LRLEKEGKADEIYNRWFGPDTK 259 >gi|168482841|ref|ZP_02707793.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae CDC1873-00] gi|172043606|gb|EDT51652.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae CDC1873-00] Length = 254 Score = 183 bits (464), Expect = 4e-44, Method: Composition-based stats. Identities = 54/247 (21%), Positives = 97/247 (39%), Gaps = 11/247 (4%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRAL 67 ++ L L + + DI+KRG L G+ + F G + G + D + + Sbjct: 1 MISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYSGIETDLAKMV 60 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + KI+Y+P+ A+ R L ++Q+D+ T R+ Y D Sbjct: 61 ADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKLYNF--TSPYYTDAS 115 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 GF+++K I + L+G +I V G+ T+ + + K +K+ + E+ + Sbjct: 116 GFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVELGSYPELITSLH 175 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 AHR DA++ D S L +L D S + +TE N + Sbjct: 176 AHRIDAFSVDRSILSGYTSK-----RTELLDDSFKPSDYGIVTKKSNTELNNYLDNLVTK 230 Query: 248 MVTAEEL 254 L Sbjct: 231 WSKDGSL 237 >gi|332076443|gb|EGI86906.1| major cell-binding factor [Streptococcus pneumoniae GA41301] Length = 254 Score = 183 bits (464), Expect = 5e-44, Method: Composition-based stats. Identities = 55/256 (21%), Positives = 102/256 (39%), Gaps = 14/256 (5%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRAL 67 ++ L L + + DI+KRG L G+ + F G + G + D + + Sbjct: 1 MISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYSGIETDLAKMV 60 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + KI+Y+P+ A+ R L ++Q+D+ T R+ Y D Sbjct: 61 ADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKLYNF--TSPYYTDAS 115 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 GF+++K I + L+G +I V G+ T+ + + K +K+ + E+ + Sbjct: 116 GFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVELGSYPELITSLH 175 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 AHR DA++ D S L +L D S + +TE + + Sbjct: 176 AHRIDAFSVDRSILSGYTNK-----RTALLDDSFKPSDYGIVTKKSNTELNDYLDNLVTK 230 Query: 248 MVTAEELGITQKNINQ 263 + G QK ++ Sbjct: 231 W---SKDGSLQKLYDR 243 >gi|257892422|ref|ZP_05672075.1| extracellular solute-binding protein [Enterococcus faecium 1,231,408] gi|294614008|ref|ZP_06693938.1| glutamine-binding protein [Enterococcus faecium E1636] gi|257828801|gb|EEV55408.1| extracellular solute-binding protein [Enterococcus faecium 1,231,408] gi|291593115|gb|EFF24694.1| glutamine-binding protein [Enterococcus faecium E1636] Length = 244 Score = 183 bits (464), Expect = 5e-44, Method: Composition-based stats. Identities = 50/243 (20%), Positives = 93/243 (38%), Gaps = 12/243 (4%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 N IL K + G+ F + + +GFDVD +A++ I D K ++ Sbjct: 2 ANEDILERSKSTNEIIWGVKYDTRLFGMMDIESRTVQGFDVDIAKAITKKILGDNGKTEF 61 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + + +K R L++ ID + T R+ + + + GQ ++ K I SV Sbjct: 62 VEVTSKTRIPLLKNGNIDAIIATMTITDERKKQVDF--SDVYFDAGQALLVKKGSQIKSV 119 Query: 141 SQLSGA-SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L+ + ++ G+T+ + + + E E A ++ + DA T D + Sbjct: 120 DDLNASTTVLAVKGSTSAANIRQHAPDA----KILELENYAEAFTALQSGQGDAMTTDNA 175 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQ 258 L + N E+ ++ + P AI +G + V+ M I Q Sbjct: 176 ILLGIADENP---EYELVGGTFTNEPYGIAINKGQENFLKAVNQALEEMHADGTYDKIYQ 232 Query: 259 KNI 261 K Sbjct: 233 KWF 235 >gi|154249737|ref|YP_001410562.1| extracellular solute-binding protein [Fervidobacterium nodosum Rt17-B1] gi|154153673|gb|ABS60905.1| extracellular solute-binding protein family 3 [Fervidobacterium nodosum Rt17-B1] Length = 250 Score = 183 bits (464), Expect = 5e-44, Method: Composition-based stats. Identities = 56/264 (21%), Positives = 99/264 (37%), Gaps = 17/264 (6%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K FF ++ ++++ T ++ A L IK+RG L G F V GFD+ Sbjct: 1 MKKFFTMVIAVLLVVLT-VTSFAQTLTQIKQRGKLIVGTEPTFPPFEFVDEKNQVVGFDI 59 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D L+ + K++ + L ALQ +ID+ T R + Sbjct: 60 DIAMELAKRLG---VKLEIVSLPFDSLIPALQQGKIDLAIAGMTITKERAKVVDF--SKP 114 Query: 122 TYFDGQGFIMHKKKGI--SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Q ++ K + L G + VQ GTT +L ++D + + F++ Sbjct: 115 YFEANQAIVVRKDSKFEPKKLEDLVGQKVAVQLGTTGDLVVSDI-----TGINVVRFQKF 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + + R DA D + A + S I+ + A+ +G+ E N Sbjct: 170 TDAFLELQNGRVDAVVLDEAPAKAYVKKFSKFSISSIVD---TGETYGIAVKKGNKELLN 226 Query: 240 IVSWTHYAMVTAEELG-ITQKNIN 262 V+ T M + + + QK Sbjct: 227 FVNQTLDIMKGSGQYNKLLQKWFE 250 >gi|307729015|ref|YP_003906239.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1003] gi|307583550|gb|ADN56948.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1003] Length = 317 Score = 182 bits (463), Expect = 5e-44, Method: Composition-based stats. Identities = 44/251 (17%), Positives = 89/251 (35%), Gaps = 9/251 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQY 80 L + K + G V F+ A+ G+ +D + I + +++ Sbjct: 46 GTLLKVSKERVITIGYRDASVPFSYYDADQKPIGYSIDVAHLIIERIKTELKLAELQVRT 105 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +P+ ++ R LQ+ ID +T R + + + ++++K GI Sbjct: 106 IPITSQNRISLLQNNTIDFECTSTTNNAERAQQVSFSNS--FFTIDTRLLVNRKSGIKDF 163 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + L ++ V AGTT+E L +M I + E R A D + Sbjct: 164 ADLKQKTVVVGAGTTSEKILRKMNVEKSMGMDIISAKDHTESFLMLSTGRAKAMMMDDAL 223 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L + P ++ I+ + + + D I+ A+ A++ G+ K Sbjct: 224 LAGERAKARNPDDYEIVGTPQTHEAYGCMLRRNDAPMKAIMD---AAIAHAQKSGLAAKL 280 Query: 261 INQVSKDTTNP 271 + + P Sbjct: 281 YQRWFQQPIPP 291 >gi|146319016|ref|YP_001198728.1| glutamine ABC transporter substrate-binding protein [Streptococcus suis 05ZYH33] gi|146321225|ref|YP_001200936.1| glutamine ABC transporter substrate-binding protein [Streptococcus suis 98HAH33] gi|253752082|ref|YP_003025223.1| putative glutamine-binding protein precursor [Streptococcus suis SC84] gi|253753907|ref|YP_003027048.1| glutamine-binding protein precursor [Streptococcus suis P1/7] gi|253755218|ref|YP_003028358.1| glutamine-binding protein precursor [Streptococcus suis BM407] gi|145689822|gb|ABP90328.1| ABC transporter substrate-binding protein - glutamine transport/Major cell binding factor precursor [Streptococcus suis 05ZYH33] gi|145692031|gb|ABP92536.1| ABC transporter substrate-binding protein - glutamine transport/Major cell binding factor precursor [Streptococcus suis 98HAH33] gi|251816371|emb|CAZ52002.1| putative glutamine-binding protein precursor [Streptococcus suis SC84] gi|251817682|emb|CAZ55430.1| putative glutamine-binding protein precursor [Streptococcus suis BM407] gi|251820153|emb|CAR46491.1| putative glutamine-binding protein precursor [Streptococcus suis P1/7] gi|319758449|gb|ADV70391.1| glutamine ABC transporter substrate-binding protein [Streptococcus suis JS14] Length = 279 Score = 182 bits (463), Expect = 5e-44, Method: Composition-based stats. Identities = 55/261 (21%), Positives = 105/261 (40%), Gaps = 21/261 (8%) Query: 5 FFVSILCLIILFFT----------SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN- 53 + + LI+L F + TN+ + I RG L+ G+ + F + Sbjct: 12 IRLLVFGLILLVFAKQPVAQTETPASITNSDQVQAIIDRGVLRVGVKQDVPNFGYKNPDT 71 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+++G ++D R ++ + D I++ P+ A+ R L + Q+D++ T R Sbjct: 72 GEFEGMEIDIARKIADELGVD---IEFTPVTAQTRGPLLDNSQVDMVIATFTITEER--K 126 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 L F Y D GF+++K GI + + L G +I V G+ T +++ + + + Sbjct: 127 LLYNFTTPYYTDAVGFLVNKDSGIKTFTDLDGKTIGVAQGSITRTLISELADKYGITVNF 186 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 E+ + RAHR DA++ D S L + ++ S S Sbjct: 187 AELGSYPELSVSLRAHRTDAFSVDQSILAGYISSKS-----ELMDFSFSASDYGIVTKLS 241 Query: 234 DTEWYNIVSWTHYAMVTAEEL 254 + + N ++ L Sbjct: 242 NKDLNNYLNSLVEKWTADGSL 262 >gi|332077039|gb|EGI87501.1| major cell-binding factor [Streptococcus pneumoniae GA17545] Length = 254 Score = 182 bits (463), Expect = 5e-44, Method: Composition-based stats. Identities = 55/256 (21%), Positives = 103/256 (40%), Gaps = 14/256 (5%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRAL 67 ++ L L + + DI+KRG L G+ + F G + G + D + + Sbjct: 1 MISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYSGIETDLAKMV 60 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + KI+Y+P+ A+ R L ++Q+D+ T R+ Y D Sbjct: 61 ADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKLYNF--TSPYYTDAS 115 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 GF+++K I + L+G +I V G+ T+ + + K +K+ + E+ + Sbjct: 116 GFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVELGSYPELITSLH 175 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 AHR DA++ D S L +L D S + + +TE + + Sbjct: 176 AHRIDAFSVDHSILSGYTSK-----RTALLDDSFKPSDYSIVTKKSNTELNDYLDNLVTK 230 Query: 248 MVTAEELGITQKNINQ 263 + G QK ++ Sbjct: 231 W---SKDGSLQKLYDR 243 >gi|309780305|ref|ZP_07675056.1| glutamate/aspartate transporter [Ralstonia sp. 5_7_47FAA] gi|308921008|gb|EFP66654.1| glutamate/aspartate transporter [Ralstonia sp. 5_7_47FAA] Length = 302 Score = 182 bits (463), Expect = 6e-44, Method: Composition-based stats. Identities = 45/256 (17%), Positives = 95/256 (37%), Gaps = 9/256 (3%) Query: 13 IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA----LS 68 F ++ L I+ G + + F+ + + G+ +D C + Sbjct: 21 TAFFPSNAVAATPTLDRIRDSGTVHVAYREDSIPFSYLDGS-KPVGYAIDICSRLIDSIK 79 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 +++ K+QY+P+ A R + S + D+ +T+ RE +AF Y Sbjct: 80 TSLKRPDLKVQYVPVTAATRMDVVASGKADLECGSTNN--SRERREKVAFTIPHYITKGR 137 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 ++ I L+G ++ G+T LA M + + A Sbjct: 138 MLVKTGSPIQQWEDLNGKTVVAARGSTN-ADLARKLNETGMTVQVVDANDLRSAFAMLAD 196 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 R +A+ GD L ++ T P+++ + S A + + D E+ ++ + + Sbjct: 197 GRANAFAGDDILLSGMRATAKNPADYRLAGKTQLVSSYAIMLSKQDPEFKKLIDQSMTRL 256 Query: 249 VTAEEL-GITQKNINQ 263 + E+ + +K Q Sbjct: 257 IVDGEVPKLYKKWFQQ 272 >gi|325684596|gb|EGD26755.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 281 Score = 182 bits (463), Expect = 6e-44, Method: Composition-based stats. Identities = 49/273 (17%), Positives = 107/273 (39%), Gaps = 14/273 (5%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDF 63 F +L ++L S S ++S +K+ + G+ F+ + +G GF+VD Sbjct: 11 FMAVLLLSLVLTACSHSQSSSTYDRVKQTNTITWGMRADTRLFSMMDVDSGKATGFEVDL 70 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 RA++ I K++ ++ K R + L+ +D + T R + + Sbjct: 71 ARAITKQILGPKGKMKIEYISEKSRIMDLKIGNVDAVMATMTNTPDRRKIINF--SDTYF 128 Query: 124 FDGQGFIMHKKKGISSVSQLSGAS--ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 G+ I+ KK ++S+ + + I G+T + + Y K I ++ Sbjct: 129 MAGETLIVPKKSKLNSIKDFNNSKYSIAAVKGSTADSDVHKYAP----KSRVIFYDDYGS 184 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A ++ + +A D + L L +D + +LPD + P I +G+ ++ V Sbjct: 185 CYNALKSGKANAMVSDNAVLAGLI--SDDKDKFKMLPDTFTVEPYGIGIKKGEDKFTAEV 242 Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 + + G + + + +++ Sbjct: 243 NQALK---VLRKNGTYARLMKKWFNGVPGFNIK 272 >gi|223932683|ref|ZP_03624682.1| extracellular solute-binding protein family 3 [Streptococcus suis 89/1591] gi|330832443|ref|YP_004401268.1| extracellular solute-binding protein family 3 [Streptococcus suis ST3] gi|223898653|gb|EEF65015.1| extracellular solute-binding protein family 3 [Streptococcus suis 89/1591] gi|329306666|gb|AEB81082.1| extracellular solute-binding protein family 3 [Streptococcus suis ST3] Length = 279 Score = 182 bits (462), Expect = 7e-44, Method: Composition-based stats. Identities = 54/260 (20%), Positives = 101/260 (38%), Gaps = 19/260 (7%) Query: 4 DFFVSILCLIILF--------FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-G 54 V L L + + TN+ + I RG L+ G+ + F + G Sbjct: 13 RLLVFGLILFVFAKQPVAQTETPASITNSDQVQAIIDRGVLRVGVKQDVPNFGYKNPDTG 72 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 +++G ++D R ++ + D I++ P+ A+ R L + Q+D++ T R L Sbjct: 73 EFEGMEIDIARKIADELGVD---IEFTPVTAQTRGPLLDNGQVDMVIATFTITEER--KL 127 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F Y D GF+++K GI + + L G +I V G+ T ++ + + + Sbjct: 128 LYNFTTPYYTDAVGFLVNKDSGIKTFTDLDGKTIGVAQGSITRTLISKLADKYGISVNFA 187 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 E+ + RAHR DA++ D S L + ++ S S + Sbjct: 188 ELGSYPELSVSLRAHRTDAFSVDQSILSGYISSKS-----ELMDFSFSASDYGIVTKLSN 242 Query: 235 TEWYNIVSWTHYAMVTAEEL 254 + N ++ L Sbjct: 243 KDLNNYLNSLVEKWTADGSL 262 >gi|121610312|ref|YP_998119.1| extracellular solute-binding protein [Verminephrobacter eiseniae EF01-2] gi|121554952|gb|ABM59101.1| extracellular solute-binding protein, family 3 [Verminephrobacter eiseniae EF01-2] Length = 278 Score = 182 bits (462), Expect = 7e-44, Method: Composition-based stats. Identities = 61/237 (25%), Positives = 101/237 (42%), Gaps = 7/237 (2%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 V++L L+ + FTS +A L D+ KRG+L G F G+ +GFDVD R Sbjct: 10 LVAVLTLLGMCFTSL-AHADKLADVLKRGYLIVGTTGSSPPFGFKDEKGELQGFDVDMSR 68 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ A+F DP K++++ L + R+ ALQ+ Q+D++++ T R + +G P + Sbjct: 69 LIAKALFGDPQKVKFVLLGNEARWTALQTDQVDMVAQFATITPERLVRVGF--TPRYFDT 126 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 G ++ K I S + L A + + T E D K F V++ A Sbjct: 127 GMTVVVRKDSKIKSFADLDSADVTIATLTVPEQI--DLVKRMAPNARVASFATVDQQFLA 184 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 R+ R A+ D+ + P VI A G+ W + Sbjct: 185 LRSGRVQAFLVDLPI--GMWYGATSPDARVIPGVYDGFQNYGIAYKLGELSWKQFLD 239 >gi|149010773|ref|ZP_01832144.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP19-BS75] gi|147765254|gb|EDK72183.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP19-BS75] Length = 254 Score = 182 bits (462), Expect = 7e-44, Method: Composition-based stats. Identities = 55/256 (21%), Positives = 103/256 (40%), Gaps = 14/256 (5%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRAL 67 ++ L L + + DI+KRG L G+ + F G + G + D + + Sbjct: 1 MISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYSGIETDLAKMV 60 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + KI+Y+P+ A+ R L ++Q+D+ T R+ Y D Sbjct: 61 ADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKLYNF--TSPYYTDAS 115 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 GF+++K I + L+G +I V G+ T+ + + K +K+ + E+ + Sbjct: 116 GFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVELGSYPELITSLH 175 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 AHR DA++ D S L +L D S + + +TE + + Sbjct: 176 AHRIDAFSVDRSILSGYTSK-----RTALLDDSFKPSDYSIVTKKSNTELNDYLDNLVTK 230 Query: 248 MVTAEELGITQKNINQ 263 + G QK ++ Sbjct: 231 W---SKDGSLQKLYDR 243 >gi|238854965|ref|ZP_04645295.1| glutamine-binding protein [Lactobacillus jensenii 269-3] gi|260664250|ref|ZP_05865103.1| amino acid ABC transporter periplasmic protein [Lactobacillus jensenii SJ-7A-US] gi|282931676|ref|ZP_06337169.1| glutamine-binding protein [Lactobacillus jensenii 208-1] gi|313472445|ref|ZP_07812937.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Lactobacillus jensenii 1153] gi|238832755|gb|EEQ25062.1| glutamine-binding protein [Lactobacillus jensenii 269-3] gi|239530142|gb|EEQ69143.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Lactobacillus jensenii 1153] gi|260562136|gb|EEX28105.1| amino acid ABC transporter periplasmic protein [Lactobacillus jensenii SJ-7A-US] gi|281304287|gb|EFA96396.1| glutamine-binding protein [Lactobacillus jensenii 208-1] Length = 275 Score = 182 bits (462), Expect = 8e-44, Method: Composition-based stats. Identities = 49/279 (17%), Positives = 102/279 (36%), Gaps = 18/279 (6%) Query: 2 YKDFFVSILCLIILFFTSF---STNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWK 57 Y+ F S L++L ++ S ++ IK + G+ F + + Sbjct: 5 YRWIFASFSLLVLLTLSACQNKSKSSDTYEKIKTSQAITWGVKADTRLFGIMNIKTSQLE 64 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GF++D + LS + K+ + AK + L++ +D L T R+ + Sbjct: 65 GFEIDLAKELSKKMLGKNIKVNLVQTTAKTKIPLLRNGSVDALLSTMTITKERKKIVDF- 123 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + GQ ++ + I +V L +G ++ GTT + + + Sbjct: 124 -STPYFNAGQAILVPQNSKIRNVYDLNKNGITVLAVKGTTAVANIRKFAPKAS----VSE 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 ++ + +A +A + A T D L + N I+ + P A+ +GDT Sbjct: 179 YDDYGQAFSALKAGQGQALTSDNGILAGIAAENPG---FKIVGGTFTSEPYGIAVRKGDT 235 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 + + A+ + G QK + + ++ Sbjct: 236 KLR---KKINQALAELKADGTYQKLLKKWFSGIPGFSIK 271 >gi|281411813|ref|YP_003345892.1| extracellular solute-binding protein family 3 [Thermotoga naphthophila RKU-10] gi|281372916|gb|ADA66478.1| extracellular solute-binding protein family 3 [Thermotoga naphthophila RKU-10] Length = 246 Score = 182 bits (462), Expect = 8e-44, Method: Composition-based stats. Identities = 51/265 (19%), Positives = 109/265 (41%), Gaps = 21/265 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V +L + I+ F+ ++ +IK RG+L G++ F V +G+ GFD Sbjct: 1 MKKLLVVLVLLVSIVIFSG------VIDEIKSRGYLLVGLSADFPPFEFVDESGNIVGFD 54 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + ++ + + ++ + + +L +K+ID++ T R+ + Sbjct: 55 VDLAKEIARRLGVE---LKIVDMTFDGLIPSLLTKKIDVIISGMTITEERKKVVAF--SD 109 Query: 121 ITYFDGQGFIMHKKKGI--SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + GQ ++ K + L G ++ VQ GTT ++ ++ Y + F++ Sbjct: 110 PYFDAGQVIVVRKDSDFRPKTYEDLVGKTVAVQIGTTGDIEVSKY-----EGIKVVRFDK 164 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + + R DA D + A N + VI ++S A+ + DT+ Sbjct: 165 FTDAFLELKRGRADAVVLDSATARAFVAKNP---DLVISSGVLSSEQYGIAVRKEDTDLL 221 Query: 239 NIVSWTHYAMVTAEELGITQKNINQ 263 ++ + + + +K ++ Sbjct: 222 EFINSVLRELKKSPYDVLIEKWFSE 246 >gi|319763771|ref|YP_004127708.1| extracellular solute-binding protein family 3 [Alicycliphilus denitrificans BC] gi|330823965|ref|YP_004387268.1| ABC transporter periplasmic subunit [Alicycliphilus denitrificans K601] gi|317118332|gb|ADV00821.1| extracellular solute-binding protein family 3 [Alicycliphilus denitrificans BC] gi|329309337|gb|AEB83752.1| ABC-type transporter, periplasmic subunit family 3 [Alicycliphilus denitrificans K601] Length = 296 Score = 182 bits (461), Expect = 9e-44, Method: Composition-based stats. Identities = 47/264 (17%), Positives = 104/264 (39%), Gaps = 7/264 (2%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 + +L + + L +K G + G+ + + + + G+ V+ C + Sbjct: 9 GAVLATLLHLPAIAQPQGTLEKVKASGAIVLGVREASAPLSYLLGSSQYVGYHVELCERI 68 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + +F ++++Y + ++ R +Q+ +D+ +T T R+ + A TY Sbjct: 69 AKNLF-PQAQVRYQAVTSQNRMPLVQNGTVDLECGSTSNTASRKEQVDFAN--TTYITEA 125 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 + + K GI S QL+G +I GTT L + +K++ ++ + E Sbjct: 126 RYAVKKSSGIESTGQLAGKTIVTTTGTTLVPRLRKLERE-GLKFNLVMAKDHAESMLMVA 184 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 R DA+ D + L P + I+ + + P+A + + D + V Sbjct: 185 QGRADAFAMDDNTLAGNIAMLQNPQDFRIVGTPLGREPIALMLRRNDAAFKQAVDAEISK 244 Query: 248 MVTAEELGITQKNINQVSKDTTNP 271 ++ + EL + ++ P Sbjct: 245 LIRSGEL---RAMYDKWFMSPIPP 265 >gi|241664890|ref|YP_002983250.1| family 3 extracellular solute-binding protein [Ralstonia pickettii 12D] gi|240866917|gb|ACS64578.1| extracellular solute-binding protein family 3 [Ralstonia pickettii 12D] Length = 302 Score = 182 bits (461), Expect = 9e-44, Method: Composition-based stats. Identities = 41/249 (16%), Positives = 89/249 (35%), Gaps = 9/249 (3%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI----FDDP 75 + + L I+ G + G + F+ + G+ +D C L ++ Sbjct: 28 VAAASPTLDRIRDSGTVHVGYREDSIPFSYLDGT-KPVGYAIDICSRLIDSLRTSLKRPD 86 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 K+QY+P+ A R + + + D+ +T+ + R + Y ++ Sbjct: 87 LKVQYVPVTAANRLDVIATGKADLECGSTNNSPERRQKVAFTI--PHYITKGRMLVKANS 144 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I L+G ++ G+T LA M + + A R A+ Sbjct: 145 PIQQWEDLNGKTVVAARGSTN-ADLARKLNETGMTMQVVDANDLRSAFAMLTDGRAQAFA 203 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL- 254 GD L ++ P+++ + S A + + D E+ ++ + ++ E+ Sbjct: 204 GDDILLSGMRAMAKNPADYRLAGKTQLVSSYAIMLSKQDPEFKKLIDQSMTRLIVDGEVP 263 Query: 255 GITQKNINQ 263 + +K Q Sbjct: 264 KLYKKWFQQ 272 >gi|209519485|ref|ZP_03268280.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] gi|209500086|gb|EEA00147.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] Length = 319 Score = 182 bits (461), Expect = 9e-44, Method: Composition-based stats. Identities = 45/251 (17%), Positives = 84/251 (33%), Gaps = 10/251 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS----SAIFDDPSKIQY 80 L I G + G+ + F+ G+ D + + ++ Sbjct: 49 GTLKKIHDDGVVVLGVRETSIPFSYFDGQ-RTVGYSQDIALQIVDEIRKTLGMPQLRVHE 107 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + + + R L + QID+ +T T+ RE + Y I K GI+ Sbjct: 108 VTVTSSNRTPMLMNNQIDLECGSTTHTVERENVAAFSDSIFQY--AVRMITRKNSGITDF 165 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + L+G + AGT+ E L + + +E A + R A+ D Sbjct: 166 ADLAGKPVVTTAGTSDERLLRSLNTDRQLNMRIMSARDHQEAFTAMKEGRAVAFVMDEPI 225 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 +Y K T+ P + ++ + A +GD +V+ T+ G ++ Sbjct: 226 VYGFKATDPHPDDFIVTGTPLGYEVYACMFRKGDEPLRALVNRVIAHSQTS---GDAERL 282 Query: 261 INQVSKDTTNP 271 Q P Sbjct: 283 YKQWFTQPIPP 293 >gi|268319110|ref|YP_003292766.1| amino acid ABC transporter solute-binding component [Lactobacillus johnsonii FI9785] gi|262397485|emb|CAX66499.1| amino acid ABC transporter solute-binding component [Lactobacillus johnsonii FI9785] gi|329666941|gb|AEB92889.1| glutamine ABC transporter solute-binding component [Lactobacillus johnsonii DPC 6026] Length = 274 Score = 182 bits (461), Expect = 9e-44, Method: Composition-based stats. Identities = 39/253 (15%), Positives = 97/253 (38%), Gaps = 13/253 (5%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 ++++ +K+ + G+ F + G +GF+VD +AL+ + +K +++ Sbjct: 29 SSNVYDQVKESKTITWGVKADTRLFGLMSIKTGKIEGFEVDLAKALTKQMLGKDAKAEFV 88 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 K R L++ ID + T R+ + + + GQ ++ I +V Sbjct: 89 QTTPKTRIPLLKNGNIDAILATMTITPDRKKQVTFSE--PYFTAGQSLLVKDDSSIKNVR 146 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L+G + GTT + + + ++ + A +A + A T D L Sbjct: 147 DLNGKTALAVKGTTAVDNVKKFAPKA----KVLEYDDYGQAFTALKAGQGQAMTTDNGLL 202 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 + N + ++ + P A+ +G T++ + ++ ++ G + + Sbjct: 203 AGIASENKG---YKLVGGTYTSEPYGIAVEKGQTDFADHINKALN---ELKKNGTYHRLL 256 Query: 262 NQVSKDTTNPDVQ 274 + +++ Sbjct: 257 VKWFDGIPGFNIK 269 >gi|291518760|emb|CBK73981.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [Butyrivibrio fibrisolvens 16/4] Length = 298 Score = 182 bits (461), Expect = 9e-44, Method: Composition-based stats. Identities = 63/312 (20%), Positives = 110/312 (35%), Gaps = 43/312 (13%) Query: 1 MYKDF------FVSILCLIILFFTSFSTNAS----------------------ILGDIKK 32 M K+F + L + FT+ +AS L +IK+ Sbjct: 1 MKKNFINKVTGLTLVGALAVSGFTACGASASSSDVAGTDEATVESASSAAGYRTLDEIKE 60 Query: 33 RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92 G + G+ + F V NG++ G+DV F + + KI Y+ A R L Sbjct: 61 SGTINIGVFSDKSPFGFVDENGEYAGYDVYFAERIGEDLG---VKINYVSTEAANRIEYL 117 Query: 93 QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQ 151 Q+ ++DI+ N T R + A G + + S+ L + I V Sbjct: 118 QTGKVDIILANFTVTEERAQEVDFAL--PYMNVALGVVSPDSAVVESLDDLGADDQIIVI 175 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 +GTT E Y + ++ E A+ A+ D + + A L N+ Sbjct: 176 SGTTAET----YLTKNYPDIKLQKYDAYAEAKTAFENGTGVAWANDNTEVIAFSLENE-- 229 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 V +P + + +APA+ +G+ W + + T + DT Sbjct: 230 GYTVGIPSLGDQDTIAPAVTKGNDTLL---KWLNEEIETLGTENFFHADYEATLLDTYGA 286 Query: 272 DVQRFLGIDKSS 283 D + L ++ Sbjct: 287 DYEDTLVLEGGK 298 >gi|91783382|ref|YP_558588.1| polar amino acid ABC transporter periplasmic ligand-binding protein [Burkholderia xenovorans LB400] gi|91687336|gb|ABE30536.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia xenovorans LB400] Length = 274 Score = 182 bits (461), Expect = 9e-44, Method: Composition-based stats. Identities = 57/264 (21%), Positives = 98/264 (37%), Gaps = 8/264 (3%) Query: 1 MYKDFFVSILCLIILFFT--SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K + +L + L F+ S +A L K RG L GI V F + G G Sbjct: 1 MSKRSWWVVLMMFALGFSWLSAGAHADELQMAKARGKLIVGIRNDYVPFGYLDNKGHEVG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 F+VD + ++ +F + I+++P+ A R L + +ID++ R + Sbjct: 61 FEVDLAKFIAKDMFGSDTAIEFVPVVASNRIELLNAGRIDVIFATLGKNPDRAKVIDFTD 120 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 P G + K I+ L G IC G TL + A ++F Sbjct: 121 -PYYMMAGMVLLAPKNTTITKWEDLKGRKICGSQGNMYNRTLQEKLGA-----DTVLFTG 174 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 ++ A+ +RC+A D L + I D P+ + + + + Sbjct: 175 TAQMYKAFEDNRCEAIAYDGPNLTLKANEPGWKDKDKIALDAFEFVPIVGGVRKNEPAFL 234 Query: 239 NIVSWTHYAMVTAEELGITQKNIN 262 N ++ + A L +K N Sbjct: 235 NALNQSIKKAEAAGVLVNAEKRYN 258 >gi|227890384|ref|ZP_04008189.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus johnsonii ATCC 33200] gi|227849198|gb|EEJ59284.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus johnsonii ATCC 33200] Length = 277 Score = 182 bits (461), Expect = 9e-44, Method: Composition-based stats. Identities = 39/253 (15%), Positives = 97/253 (38%), Gaps = 13/253 (5%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 ++++ +K+ + G+ F + G +GF+VD +AL+ + +K +++ Sbjct: 32 SSNVYDQVKESKTITWGVKADTRLFGLMSIKTGKIEGFEVDLAKALTKQMLGKDAKAEFV 91 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 K R L++ ID + T R+ + + + GQ ++ I +V Sbjct: 92 QTTPKTRIPLLKNGNIDAILATMTITPDRKKQVTFSE--PYFTAGQSLLVKDDSSIKNVR 149 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L+G + GTT + + + ++ + A +A + A T D L Sbjct: 150 DLNGKTALAVKGTTAVDNVKKFAPKA----KVLEYDDYGQAFTALKAGQGQAMTTDNGLL 205 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 + N + ++ + P A+ +G T++ + ++ ++ G + + Sbjct: 206 AGIASENKG---YKLVGGTYTSEPYGIAVEKGQTDFADHINKALN---ELKKNGTYHRLL 259 Query: 262 NQVSKDTTNPDVQ 274 + +++ Sbjct: 260 VKWFDGIPGFNIK 272 >gi|94309646|ref|YP_582856.1| extracellular solute-binding protein [Cupriavidus metallidurans CH34] gi|93353498|gb|ABF07587.1| glutamate and aspartate transporter subunit ; periplasmic-binding component of ABC superfamily [Cupriavidus metallidurans CH34] Length = 302 Score = 182 bits (461), Expect = 1e-43, Method: Composition-based stats. Identities = 45/253 (17%), Positives = 90/253 (35%), Gaps = 11/253 (4%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS----KI 78 + L IK G + G + F+ + G+ D+ A+ + + ++ Sbjct: 31 DGDTLKKIKDSGVISLGYRESSIPFSYSDGK-EVMGYSHDYLLAIVDKVKSTLNMPNLQV 89 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + P+ ++ R +Q+ IDI +T L R+ + + Y G + K G++ Sbjct: 90 KLTPITSQNRIPLMQNGTIDIECGSTTNNLERQKQVAFSNSLFIY--GIRMLTKKDSGVT 147 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 QL ++ AGTT E L M + + + + R A+ D Sbjct: 148 DFPQLKDKNVVTTAGTTGERLLVK-MNGEGMNMNLTSAKDHGQAFLILESGRAAAFVMDE 206 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 LY + +E V+ + A + D + +V ++T+ G + Sbjct: 207 PLLYGERTKAKNAAEWVVAGKPLQTENYACMFRKDDPSFKKLVDGVVADIMTS---GRGE 263 Query: 259 KNINQVSKDTTNP 271 K + + P Sbjct: 264 KLYAKWFQSPIPP 276 >gi|313123232|ref|YP_004033491.1| glutamine ABC transporter, glutamine-binding protein [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312279795|gb|ADQ60514.1| Glutamine ABC transporter, glutamine-binding protein [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 281 Score = 182 bits (461), Expect = 1e-43, Method: Composition-based stats. Identities = 49/283 (17%), Positives = 110/283 (38%), Gaps = 20/283 (7%) Query: 1 MYKDF-----FVSILCLIILFFT-SFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-AN 53 M + +++L L ++F S S ++S +K+ + G+ F+ + + Sbjct: 1 MARKLRELTALMAVLLLSLVFTACSHSQSSSTYDRVKQTNTITWGMRADTRLFSMMDVDS 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G GF+VD RA++ I K++ ++ K R + L+ +D + T R Sbjct: 61 GKATGFEVDLARAITKQILGPKGKMKIEYISEKSRIMDLKIGNVDAVMATMTNTPDRRKI 120 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS--ICVQAGTTTELTLADYFKAHNMKY 171 + + G+ I+ KK ++S+ + + I G+T + + Y Sbjct: 121 INF--SDTYFMAGETLIVPKKSKLNSIKDFNNSKYSIAAVKGSTADSDVHKYAPKA---- 174 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 I ++ A ++ + +A D + L L +D + +LPD + P I Sbjct: 175 RVIFYDDYGSCYNALKSGKANAMVSDNAVLAGLI--SDDKDKFKMLPDTFTVEPYGIGIK 232 Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 +G+ ++ V+ + G + + + +++ Sbjct: 233 KGEDKFTAEVNQALK---VLRKNGTYARLMKKWFNGVPGFNIK 272 >gi|118465451|ref|YP_883877.1| extracellular solute-binding protein, family protein 3 [Mycobacterium avium 104] gi|118166738|gb|ABK67635.1| Bacterial extracellular solute-binding protein, family protein 3 [Mycobacterium avium 104] Length = 334 Score = 182 bits (461), Expect = 1e-43, Method: Composition-based stats. Identities = 62/263 (23%), Positives = 106/263 (40%), Gaps = 11/263 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDD 74 F T +A++ DI+ RG L G++ G F+ G+ GFDVD ++ IF Sbjct: 81 FPTKAEADAAV-ADIRARGRLIVGLDIGSNLFSFRDPITGEITGFDVDIAGEIARDIFGA 139 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 PS ++Y L++ ER ALQ ++D++ + T R + + Q + + Sbjct: 140 PSHVEYRILSSDERVTALQRGEVDVVVKTMTITCDRRKQVNF--STVYLDANQRILAPRD 197 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I+ VS LSG +CV GTT+ + + + + A + DA Sbjct: 198 SPITKVSDLSGKRVCVAKGTTSLHRIRQI----DPPPIVVSVVNWADCLVAMQQREIDAV 253 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 + D S L L + P H++ P++ ++ P I +T V+ T + Sbjct: 254 STDDSILAGL--VEEDPYLHIVGPNMATQ-PYGIGINLNNTGLVRFVNGTLERIRRDGTW 310 Query: 255 GITQKNINQVSKDTTNPDVQRFL 277 + V P R+L Sbjct: 311 NTLYRKWLTVLGPAPAPPTPRYL 333 >gi|148992284|ref|ZP_01822007.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP9-BS68] gi|168488293|ref|ZP_02712492.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP195] gi|237649852|ref|ZP_04524104.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae CCRI 1974] gi|237821285|ref|ZP_04597130.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae CCRI 1974M2] gi|147928910|gb|EDK79922.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP9-BS68] gi|183573167|gb|EDT93695.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP195] gi|332074415|gb|EGI84891.1| major cell-binding factor [Streptococcus pneumoniae GA17570] Length = 254 Score = 182 bits (461), Expect = 1e-43, Method: Composition-based stats. Identities = 54/256 (21%), Positives = 101/256 (39%), Gaps = 14/256 (5%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRAL 67 ++ L L + + DI+KRG L G+ + F G + G + D + + Sbjct: 1 MISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYSGIETDLAKMV 60 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + KI+Y+P+ A+ R L ++Q+D+ T R+ Y D Sbjct: 61 ADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKLYNF--TSPYYTDAS 115 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 GF+++K I + L+G +I V G+ T+ + + K +K+ + E+ + Sbjct: 116 GFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVELGSYPELITSLH 175 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 AHR D ++ D S L +L D S + +TE + + Sbjct: 176 AHRIDTFSVDRSILSGYTSK-----RTALLDDSFKPSDYGIVTKKSNTELNDYLDTLVTK 230 Query: 248 MVTAEELGITQKNINQ 263 + G QK ++ Sbjct: 231 W---SKDGSLQKLYDR 243 >gi|254777189|ref|ZP_05218705.1| extracellular solute-binding protein, family protein 3 [Mycobacterium avium subsp. avium ATCC 25291] Length = 326 Score = 182 bits (461), Expect = 1e-43, Method: Composition-based stats. Identities = 62/263 (23%), Positives = 106/263 (40%), Gaps = 11/263 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDD 74 F T +A++ DI+ RG L G++ G F+ G+ GFDVD ++ IF Sbjct: 73 FPTKAEADAAV-ADIRARGRLIVGLDIGSNLFSFRDPITGEITGFDVDIAGEIARDIFGA 131 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 PS ++Y L++ ER ALQ ++D++ + T R + + Q + + Sbjct: 132 PSHVEYRILSSDERVTALQRGEVDVVVKTMTITCDRRKQVNF--STVYLDANQRILAPRD 189 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I+ VS LSG +CV GTT+ + + + + A + DA Sbjct: 190 SPITKVSDLSGKRVCVAKGTTSLHRIRQI----DPPPIVVSVVNWADCLVAMQQREIDAV 245 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 + D S L L + P H++ P++ ++ P I +T V+ T + Sbjct: 246 STDDSILAGL--VEEDPYLHIVGPNMATQ-PYGIGINLNNTGLVRFVNGTLERIRRDGTW 302 Query: 255 GITQKNINQVSKDTTNPDVQRFL 277 + V P R+L Sbjct: 303 NTLYRKWLTVLGPAPAPPTPRYL 325 >gi|270264104|ref|ZP_06192371.1| hypothetical protein SOD_g00350 [Serratia odorifera 4Rx13] gi|270041753|gb|EFA14850.1| hypothetical protein SOD_g00350 [Serratia odorifera 4Rx13] Length = 279 Score = 182 bits (461), Expect = 1e-43, Method: Composition-based stats. Identities = 56/259 (21%), Positives = 97/259 (37%), Gaps = 16/259 (6%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKI 78 + +A L DIKK G ++ + F + G+DVD A+ A+ K+ Sbjct: 20 GAAHADKLDDIKKAGVVRIAVFDSNPPFGYIDPQSKKLVGYDVDVADAIGKALG---VKV 76 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + N R L SK++D+++ N T R + + F + GQ FI K + Sbjct: 77 ELRATNPANRIPLLVSKKVDLIAANFTITDER--AKEVNFSVPYFATGQKFIARKG-VLK 133 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + + I GT E+TL +++ I ++ A R A T D Sbjct: 134 TPEDIKKLRIGADKGTVQEITLREHYPTA----KVISYDDTPLAFVALRNGNVQAITQDD 189 Query: 199 SALYALKLTND--RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 + L L + ++ I P I+K I +G+ ++ T + E+ G Sbjct: 190 AKLVGLLGNLPAAQKADFEISPFSITKEYQGVGIPKGEDRLTASINDTL---IKLEKDGE 246 Query: 257 TQKNINQVSKDTTNPDVQR 275 K ++ T R Sbjct: 247 AVKIYDRWFGPETKTAQPR 265 >gi|229588679|ref|YP_002870798.1| glutamate/aspartate ABC transporter periplasmic binding protein [Pseudomonas fluorescens SBW25] gi|229360545|emb|CAY47402.1| glutamate/aspartate ABC transport system, periplasmic binding protein precursor [Pseudomonas fluorescens SBW25] Length = 308 Score = 181 bits (460), Expect = 1e-43, Method: Composition-based stats. Identities = 44/249 (17%), Positives = 85/249 (34%), Gaps = 12/249 (4%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSK----IQ 79 L I G + + F+ + +G G+ D A+ + D +K + Sbjct: 28 GTLKKINDSGTITLAHRDSSIPFSYIADGSGKPVGYSHDIQLAVVEQLKKDLNKPDLKAK 87 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--- 136 Y + ++ R +Q+ D+ +T R + + G ++ K K Sbjct: 88 YNLVTSQTRIPLIQNGTADLECGSTTNNAERAQQVDFTVNI--FEIGTRLLVKKDKDGKP 145 Query: 137 -ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 + + L G ++ AGTT+E + M + I + E + R A+ Sbjct: 146 SYADFADLKGKNVVTTAGTTSERIIKAMNADKQMGMNVISAKDHGESFQMLESGRAVAFM 205 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D + L + +P + VI S A + + D + V A+ + E+ Sbjct: 206 MDDALLAGEEAKAKKPDDWVITGTPQSFEAYACMVRKDDPAFKKAVDDAIVALYKSGEIN 265 Query: 256 -ITQKNINQ 263 I K Sbjct: 266 KIYSKWFES 274 >gi|42518676|ref|NP_964606.1| glutamine ABC transporter solute-binding component [Lactobacillus johnsonii NCC 533] gi|41582962|gb|AAS08572.1| glutamine ABC transporter solute-binding component [Lactobacillus johnsonii NCC 533] Length = 274 Score = 181 bits (460), Expect = 1e-43, Method: Composition-based stats. Identities = 39/253 (15%), Positives = 97/253 (38%), Gaps = 13/253 (5%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 ++++ +K+ + G+ F + G +GF+VD +AL+ + +K +++ Sbjct: 29 SSNVYDQVKESKTITWGVKADTRLFGLMSIKTGKIEGFEVDLAKALTKQMLGKDAKAEFV 88 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 K R L++ ID + T R+ + + + GQ ++ I +V Sbjct: 89 QTTPKTRIPLLKNGNIDAILATMTITPDRKKQVTFSE--PYFTAGQSLLVKDDSSIKNVR 146 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L+G + GTT + + + ++ + A +A + A T D L Sbjct: 147 DLNGKTALAVKGTTAVDNVKKFAPKA----TVLEYDDYGQAFTALKAGQGQAMTTDNGLL 202 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 + N + ++ + P A+ +G T++ + ++ ++ G + + Sbjct: 203 AGIASENKG---YKLVGGTYTSEPYGIAVEKGQTDFADHINKALN---ELKKNGTYHRLL 256 Query: 262 NQVSKDTTNPDVQ 274 + +++ Sbjct: 257 VKWFDGIPGFNIK 269 >gi|260219978|emb|CBA27056.1| hypothetical protein Csp_A00370 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 282 Score = 181 bits (460), Expect = 1e-43, Method: Composition-based stats. Identities = 38/262 (14%), Positives = 88/262 (33%), Gaps = 9/262 (3%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI----FDD 74 + +L + G L + F+ V A+ G+ V+ C L+ A+ Sbjct: 5 GPAAATGVLERVSSGGKLVIAHRESSIPFSYVDADKKPVGYAVELCLKLADAVRKKTGAK 64 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 ++++L + R + + D+ +T R + + G ++ Sbjct: 65 NMQVEFLQVTPANRIAMVAEGKADLECGSTTNNAERRQKVAFTI--PHFITGARMLVRAD 122 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I + L G + GTT + ++ + + DA+ Sbjct: 123 SKIERIEDLEGKKLVSTKGTTPLKAAEQANRERLLRITILEAPDHAKAVDMVEKSEADAF 182 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D LY L +P ++ ++ PLA + + D E+ ++ ++ ++E+ Sbjct: 183 VMDDVLLYGLASNRPKPESLRVVGKFLTTEPLAIMLPKDDPEFKKLIDEEMRRLIVSKEI 242 Query: 255 GITQKNINQVSKDTTNPDVQRF 276 Q ++ P+ + Sbjct: 243 ---QPIYDKWFLKPIPPNDKAL 261 >gi|157884161|pdb|2V25|A Chain A, Structure Of The Campylobacter Jejuni Antigen Peb1a, An Aspartate And Glutamate Receptor With Bound Aspartate gi|157884162|pdb|2V25|B Chain B, Structure Of The Campylobacter Jejuni Antigen Peb1a, An Aspartate And Glutamate Receptor With Bound Aspartate Length = 232 Score = 181 bits (460), Expect = 1e-43, Method: Composition-based stats. Identities = 57/219 (26%), Positives = 91/219 (41%), Gaps = 8/219 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 L IK +G L G+ + +A + A G+ KGF+VD + L+ +I D KI+ + + Sbjct: 1 GKLESIKSKGQLIVGVKNDVPHYALLDQATGEIKGFEVDVAKLLAKSILGDDKKIKLVAV 60 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 NAK R L + +D + T R+ + Y D G ++ K+K S++ + Sbjct: 61 NAKTRGPLLDNGSVDAVIATFTITPERKRIYNFSE--PYYQDAIGLLVLKEKKYKSLADM 118 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 GA+I V TT+ + + K + F I AA A R DA++ D S L Sbjct: 119 KGANIGVAQAATTKKAIGEAAKKIGIDVKFSEFPDYPSIKAALDAKRVDAFSVDKSILLG 178 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + ILPD + D + V Sbjct: 179 YV-----DDKSEILPDSFEPQSYGIVTKKDDPAFAKYVD 212 >gi|225854142|ref|YP_002735654.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae JJA] gi|225722741|gb|ACO18594.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae JJA] Length = 254 Score = 181 bits (460), Expect = 1e-43, Method: Composition-based stats. Identities = 55/256 (21%), Positives = 102/256 (39%), Gaps = 14/256 (5%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRAL 67 ++ L L + + DI+KRG L G+ + F G + G + D + + Sbjct: 1 MISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYSGIETDLAKMV 60 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + KI+Y+P+ A+ R L ++Q D+ T R+ Y D Sbjct: 61 ADEL---KVKIRYVPVTAQTRGPLLDNEQGDMDIATFTITDERKKLYNF--TSPYYTDAS 115 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 GF+++K I + L+G +I V G+ T+ + + K +K+ + E+ + Sbjct: 116 GFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVELGSYPELITSLH 175 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 AHR DA++ D S L +L D S + +TE+ + + Sbjct: 176 AHRIDAFSVDRSILSGYTSK-----RTALLDDSFKPSDYGIVTKKSNTEFNDYLDNLVTK 230 Query: 248 MVTAEELGITQKNINQ 263 + G QK ++ Sbjct: 231 W---SKDGSLQKLYDR 243 >gi|187929541|ref|YP_001900028.1| family 3 extracellular solute-binding protein [Ralstonia pickettii 12J] gi|309781684|ref|ZP_07676417.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Ralstonia sp. 5_7_47FAA] gi|187726431|gb|ACD27596.1| extracellular solute-binding protein family 3 [Ralstonia pickettii 12J] gi|308919325|gb|EFP64989.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Ralstonia sp. 5_7_47FAA] Length = 281 Score = 181 bits (460), Expect = 1e-43, Method: Composition-based stats. Identities = 60/249 (24%), Positives = 106/249 (42%), Gaps = 15/249 (6%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKA--NGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 + DIKK+G L CG+ F+ +K + + G+DVD C A++ ++ P Sbjct: 29 DQVSDIKKKGELVCGVLGTDEPFSFLKDPMSREIVGYDVDMCDAIAKSLGVKPV---LKQ 85 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 L R LQ ++D+L+ + RE + + T+ GQ ++ K GI+S++Q Sbjct: 86 LAVAARLPELQQGRVDLLAASLTHNKEREAQIDFSVS--TFITGQKAMVKKSSGITSLAQ 143 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G + G+T E +A K + + F+ + A + + AY D + L Sbjct: 144 LDGKKLLTVKGSTMEANIAKTIKNAD----VVSFDNSPQALLALQQGKGVAYVNDETTLI 199 Query: 203 A-LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 + ++ +LP +S LA I +G+ + V M E+ G QK Sbjct: 200 GNMAKMGPAAKDYALLPQNLSTEHLALGIRKGEPAFKKQVDDVLLGM---EKSGEAQKLF 256 Query: 262 NQVSKDTTN 270 ++ T Sbjct: 257 DKWFGPNTK 265 >gi|226951612|ref|ZP_03822076.1| extracellular solute-binding protein [Acinetobacter sp. ATCC 27244] gi|226837642|gb|EEH70025.1| extracellular solute-binding protein [Acinetobacter sp. ATCC 27244] Length = 298 Score = 181 bits (460), Expect = 1e-43, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 92/248 (37%), Gaps = 9/248 (3%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPS---- 76 + + L IK G + G + F+ + N +G+ D + A+ + Sbjct: 25 STSGTLNKIKSSGTIVLGYRDSSIPFSYIAGNPNQPEGYAHDLQLKVVEAVKQKLNMPDL 84 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 KI+Y + ++ R + + +D+ +T R+ + + + G + K G Sbjct: 85 KIRYNLVTSQNRIPLVSNGTVDLECGSTTNNKERQQQVDFSVG--FFEVGSRLLTAKDSG 142 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 I + L G + AGTT+E + + + + I + E + R A+ Sbjct: 143 IKDFADLKGKKLVTTAGTTSERYIRQHQQELGIG-EIISAKDHAESFLMLQNGRAVAFMM 201 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG- 255 D L K P++ I+ + + +GDT + +V A + E+ Sbjct: 202 DDILLAGEKSKAKDPNKWDIVGTAPIQEIYGCMLRKGDTGFKQVVDDAIKATYASGEINQ 261 Query: 256 ITQKNINQ 263 + +K Q Sbjct: 262 MYEKWFQQ 269 >gi|41409992|ref|NP_962828.1| GlnH [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398825|gb|AAS06444.1| GlnH [Mycobacterium avium subsp. paratuberculosis K-10] Length = 309 Score = 181 bits (460), Expect = 1e-43, Method: Composition-based stats. Identities = 62/263 (23%), Positives = 106/263 (40%), Gaps = 11/263 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDD 74 F T +A++ DI+ RG L G++ G F+ G+ GFDVD ++ IF Sbjct: 56 FPTKAEADAAV-ADIRARGRLIVGLDIGSNLFSFRDPITGEITGFDVDIAGEIARDIFGA 114 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 PS ++Y L++ ER ALQ ++D++ + T R + + Q + + Sbjct: 115 PSHVEYRILSSDERVTALQRGEVDVVVKTMTITCDRRKQVNF--STVYLDANQRILAPRD 172 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I+ VS LSG +CV GTT+ + + + + A + DA Sbjct: 173 SPITKVSDLSGKRVCVAKGTTSLHRIRQI----DPPPIVVSVVNWADCLVAMQQREIDAV 228 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 + D S L L + P H++ P++ ++ P I +T V+ T + Sbjct: 229 STDDSILAGL--VEEDPYLHIVGPNMATQ-PYGIGINLNNTGLVRFVNGTLERIRRDGTW 285 Query: 255 GITQKNINQVSKDTTNPDVQRFL 277 + V P R+L Sbjct: 286 NTLYRKWLTVLGPAPAPPTPRYL 308 >gi|15900517|ref|NP_345121.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae TIGR4] gi|111656914|ref|ZP_01407738.1| hypothetical protein SpneT_02001841 [Streptococcus pneumoniae TIGR4] gi|149002289|ref|ZP_01827231.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP14-BS69] gi|149021569|ref|ZP_01835624.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP23-BS72] gi|168490505|ref|ZP_02714648.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae CDC0288-04] gi|14972084|gb|AAK74761.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae TIGR4] gi|147759604|gb|EDK66595.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP14-BS69] gi|147930265|gb|EDK81250.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP23-BS72] gi|183574881|gb|EDT95409.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae CDC0288-04] Length = 254 Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats. Identities = 54/256 (21%), Positives = 101/256 (39%), Gaps = 14/256 (5%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRAL 67 ++ L L + + DI+KRG L G+ + F G + G + D + + Sbjct: 1 MISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYSGIETDLAKMV 60 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + KI+Y+P+ A+ R L ++Q+D+ T R+ Y D Sbjct: 61 ADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKLYNF--TSPYYTDAS 115 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 GF+++K I + L+G +I V G+ T+ + + K +K+ + E+ + Sbjct: 116 GFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVELGSYPELITSLH 175 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 AHR D ++ D S L +L D S + +TE + + Sbjct: 176 AHRIDTFSVDRSILSGYTSK-----RTALLDDSFKPSDYGIVTKKSNTELNDYLDNLVTK 230 Query: 248 MVTAEELGITQKNINQ 263 + G QK ++ Sbjct: 231 W---SKDGSLQKLYDR 243 >gi|94309635|ref|YP_582845.1| extracellular solute-binding protein [Cupriavidus metallidurans CH34] gi|93353487|gb|ABF07576.1| putative amino-acid-binding periplasmic abc transporter protein [Cupriavidus metallidurans CH34] Length = 282 Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats. Identities = 61/248 (24%), Positives = 106/248 (42%), Gaps = 14/248 (5%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + DIK +G L CG+ F+ V A + G+DVD C A++ ++ P + Sbjct: 31 DQIADIKAKGQLVCGVLGTDEPFSFVDPATREIVGYDVDMCNAVAKSLGVKPV---LKQI 87 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 + R LQ +D+L+ + RE + + T+ GQ ++ K+ GI+++ QL Sbjct: 88 SVAARLPELQQGHVDLLAASLTHNKERESQIDFSLS--TFITGQKAMVRKESGITTLGQL 145 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 G I G+T E +A K + F+ + A + AY D ++L + Sbjct: 146 DGKKILTVKGSTMESNIAAKIKNA----TVVSFDNSPQALLALEQGKGVAYVNDETSLVS 201 Query: 204 -LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 L ++ ++P +S LA I +G+T + N V+ M E G QK + Sbjct: 202 NLVKLGPAAKDYTLVPQYLSSEHLALGIRKGETGFRNQVNQVLSKM---ETDGDAQKLYD 258 Query: 263 QVSKDTTN 270 + T Sbjct: 259 KWFGPNTK 266 >gi|241663660|ref|YP_002982020.1| family 3 extracellular solute-binding protein [Ralstonia pickettii 12D] gi|240865687|gb|ACS63348.1| extracellular solute-binding protein family 3 [Ralstonia pickettii 12D] Length = 281 Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats. Identities = 60/249 (24%), Positives = 106/249 (42%), Gaps = 15/249 (6%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKA--NGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 + DIKK+G L CG+ F+ +K + + G+DVD C A++ ++ P Sbjct: 29 DQVSDIKKKGELVCGVLGTDEPFSFLKDPMSREIVGYDVDMCDAIAKSLGVKPV---LKQ 85 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 L R LQ ++D+L+ + RE + + T+ GQ ++ K GI+S++Q Sbjct: 86 LAVAARLPELQQGRVDLLAASLTHNKEREAQIDFSVS--TFITGQKAMVKKSSGITSLAQ 143 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G + G+T E +A K + + F+ + A + + AY D + L Sbjct: 144 LDGKKLLTVKGSTMEANIAKTIKNAD----VVSFDNSPQALLALQQGKGVAYVNDETTLI 199 Query: 203 A-LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 + ++ +LP +S LA I +G+ + V M E+ G QK Sbjct: 200 GNMAKMGPAAKDYALLPQNLSTEHLALGIRKGEPAFKKQVDDVLLGM---EKSGEAQKLF 256 Query: 262 NQVSKDTTN 270 ++ T Sbjct: 257 DKWFGPNTK 265 >gi|269796952|ref|YP_003316407.1| amino acid-binding protein [Sanguibacter keddieii DSM 10542] gi|269099137|gb|ACZ23573.1| amino acid-binding protein [Sanguibacter keddieii DSM 10542] Length = 290 Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats. Identities = 47/256 (18%), Positives = 93/256 (36%), Gaps = 10/256 (3%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 S + + + G + G F V +G GFDV+ + ++ + P I++ Sbjct: 43 EGSTMARLAEAGTMTVGTKFDQPLFGLVGPDGTPVGFDVEIAKIIAGELGIAPDDIEWTE 102 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVS 141 + R +Q ++DI+ R+ + A Y GQ +++ I S Sbjct: 103 TVSANRETFIQEDRVDIVVATYTINDDRKQVIDFA--GPYYLAGQSLMVNADDDSIQSED 160 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L+G +C G+T + + F + F + + R + D T D L Sbjct: 161 DLAGKIVCSAEGSTPAKNIEENFPDAD----LRTFSQYTDCLDPLRNGQVDVLTTDNVIL 216 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT-QKN 260 + P + + + ++ P + + DT++ N ++ T A + Sbjct: 217 AGYVAES--PDDFKLAGEQFTEEPYGIGLKKDDTDFRNFINDTLEAAYEDGRWDAAWEAT 274 Query: 261 INQVSKDTTNPDVQRF 276 +V T P V R+ Sbjct: 275 AGEVLDTPTPPAVDRY 290 >gi|83716800|ref|YP_439849.1| glutamate/aspartate ABC transporter periplasmic glutamate/aspartate-binding protein [Burkholderia thailandensis E264] gi|83650625|gb|ABC34689.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia thailandensis E264] Length = 326 Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats. Identities = 44/268 (16%), Positives = 91/268 (33%), Gaps = 7/268 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M ++ L + + +A L I + + V F+ + GF Sbjct: 31 MIHRPLAALAALFVGHAALTAAHAQTLDKIARTNQIVVSYRESAVPFSYLLTPHKAVGFS 90 Query: 61 VDFCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 VD A+ A+ + Y+P+ + R L +D+ +T T R + Sbjct: 91 VDVTEAIVDDVRKALRKPDLRTVYMPVTGQNRIPLLVDGTLDLECGSTTNTSARGKQVTF 150 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + ++ G + + I + L+ ++ G+T E L A ++ ++ Sbjct: 151 STN--YFYAGTRLMAKRGSHIGDYADLAHKAVATVGGSTNERALRHQLDAQHIDASVVLT 208 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + E R A D LY L+ P ++ + + P A + + D Sbjct: 209 KDYAEALKEVADDRAAALALDDVLLYGLRANTSDPDTWEVVGEALQIEPYACMVRKDDPA 268 Query: 237 WYNIVSWTHYAMVTAEELG-ITQKNINQ 263 + +V T ++ + E + K Sbjct: 269 FKRLVDGTLTRLMKSGEFARLYAKWFES 296 >gi|163839930|ref|YP_001624335.1| glutamate-binding protein [Renibacterium salmoninarum ATCC 33209] gi|162953406|gb|ABY22921.1| glutamate-binding protein [Renibacterium salmoninarum ATCC 33209] Length = 277 Score = 180 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 45/227 (19%), Positives = 86/227 (37%), Gaps = 10/227 (4%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + + IK G + G+ G A G++ GFD++ R +++++ KIQ+ Sbjct: 30 SGSPTFDKIKSNGKITIGVKEDQPGLGFKDPATGEYSGFDIEIARWMAASLGLSADKIQF 89 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISS 139 + + R AL + Q+D+ T R+ + A + GQG ++ K I+S Sbjct: 90 QAIASSNREQALANGQVDLYVGTYSITDKRKALVDFA--GPYFVTGQGLLVKKDNTSINS 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L+G ++C G+T + F F+ + + DA T D + Sbjct: 148 EKDLAGKTVCSATGSTPIQNIKAKFP----DTKTTEFDLYSKCVEQVKNGSADALTTDQA 203 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 L P ++ + + +GDT ++ T Sbjct: 204 ILLGYAAQ--DPDNLKVVGPPFTTEKYGIGVKKGDTALRTFLNDTLT 248 >gi|187930702|ref|YP_001901189.1| family 3 extracellular solute-binding protein [Ralstonia pickettii 12J] gi|187727592|gb|ACD28757.1| extracellular solute-binding protein family 3 [Ralstonia pickettii 12J] Length = 302 Score = 180 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 45/256 (17%), Positives = 95/256 (37%), Gaps = 9/256 (3%) Query: 13 IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA----LS 68 F ++ L I+ G + + F+ + + G+ +D C + Sbjct: 21 TAFFPSNAVAATPALDRIRDSGTVHVAYREDSIPFSYLDGS-KPVGYAIDICSRLIDSIK 79 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 +++ K+QY+P+ A R + S + D+ +T+ RE +AF Y Sbjct: 80 TSLKRPDLKVQYVPVTAATRMDVVASGKADLECGSTNN--SRERREKVAFTIPHYITKGR 137 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 ++ I L+G ++ G+T LA M + + A Sbjct: 138 MLVRTGSPIQQWEDLNGKTVVAARGSTN-ADLARKLNETGMTMQVVDANDLRSAFAMLAD 196 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 R +A+ GD L ++ T P+++ + S A + + D E+ ++ + + Sbjct: 197 GRANAFAGDDILLSGMRATAKNPADYRLAGKTQLVSSYAIMLSKQDPEFKKLIDQSMTRL 256 Query: 249 VTAEEL-GITQKNINQ 263 + E+ + +K Q Sbjct: 257 IVDGEVPKLYKKWFQQ 272 >gi|241114113|ref|YP_002973588.1| extracellular solute-binding protein family 3 [Ralstonia pickettii 12D] gi|240868686|gb|ACS66344.1| extracellular solute-binding protein family 3 [Ralstonia pickettii 12D] Length = 295 Score = 180 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 45/260 (17%), Positives = 95/260 (36%), Gaps = 6/260 (2%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 ++ L + ++ + L IK+ G + G + F + + G+ + Sbjct: 4 LLAFAALATVLGSATAQETGTLAKIKQTGVMTLGAREASIPFNYLDDHQRQAGYAWELST 63 Query: 66 ALSSAIFD----DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 ++ A+ +I+ + L + R + ++ +D+ +T L R+ + Sbjct: 64 RIADAVKRQLKLPKLEIKEINLTPQTRVALVANQTVDLECSSTTNNLERQKQVAF--SNT 121 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + G ++ K GI + L G ++ V AGTT E L + + I+ + + E Sbjct: 122 FFIVGARLLVRKNSGIQHWADLIGKNVVVSAGTTGERLLRKLNVENRWGINIILAKDINE 181 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 R A D LY+ PS ++ + + + D + +V Sbjct: 182 NFLTVETGRAVASMQDDIILYSNIARAKDPSMWEVVGMPQQREAYGCMLRKDDPAFKKLV 241 Query: 242 SWTHYAMVTAEELGITQKNI 261 T AM+ + E+ K Sbjct: 242 DDTIAAMMKSGEMEALYKRY 261 >gi|238853885|ref|ZP_04644248.1| glutamine-binding protein [Lactobacillus gasseri 202-4] gi|311111030|ref|ZP_07712427.1| glutamine-binding protein [Lactobacillus gasseri MV-22] gi|238833471|gb|EEQ25745.1| glutamine-binding protein [Lactobacillus gasseri 202-4] gi|311066184|gb|EFQ46524.1| glutamine-binding protein [Lactobacillus gasseri MV-22] Length = 274 Score = 180 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 40/253 (15%), Positives = 97/253 (38%), Gaps = 13/253 (5%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 +++I +K+ + G+ F + G +GF+VD +AL+ + +K +++ Sbjct: 29 SSNIYEQVKESKTITWGVKADTRLFGLMSIKTGKIEGFEVDLAKALTKQMLGKNAKTEFV 88 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 K R L++ ID + T R+ + + + GQ ++ I +V Sbjct: 89 QTTPKTRIPLLKNGNIDAILATMTITPDRKKQVTFSE--PYFTAGQSLLVKDNSTIKNVK 146 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L+G + GTT + + + ++ + A +A + A T D L Sbjct: 147 DLNGKTALAVKGTTAVDNVKKFAPKA----KVLEYDDYGQAFTALKAGQGQAMTTDNGLL 202 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 + N + ++ + P A+ +G T++ + ++ ++ G + + Sbjct: 203 AGIASENKG---YKLVGGTYTSEPYGIAVEKGQTDFADRINKALN---ELKKNGTYHRLL 256 Query: 262 NQVSKDTTNPDVQ 274 + +++ Sbjct: 257 VKWFNGIPGFNIK 269 >gi|291530246|emb|CBK95831.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [Eubacterium siraeum 70/3] Length = 294 Score = 180 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 61/304 (20%), Positives = 112/304 (36%), Gaps = 35/304 (11%) Query: 1 MYKDFFVSILCLIIL------FFTSFSTNAS--------------ILGDIKKRGFLKCGI 40 M K F ++ L + FT+ STNA+ L +IK G + G+ Sbjct: 1 MKKLNFKKLIALGLTAAAAVASFTACSTNATSGGSDGNTGSKVYRTLDEIKASGKINIGV 60 Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 + F V NG+++G+D+ F L + + I Y+ A R L++ ++DI+ Sbjct: 61 FSDKNPFGYVDENGEYQGYDIYFANRLGKDLGVE---INYVSTEAANRVEYLETGKVDII 117 Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTELT 159 N T R + A G + I+S+ + V +GTT EL Sbjct: 118 LANFTVTEERAEKVDFAL--PYMNVALGVVSPDSNVITSLDNWKAEDKMIVISGTTAEL- 174 Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219 Y + ++ +A A+ D + + A N V + Sbjct: 175 ---YLTKNYPDIKLQKYDSYATAKSAIENGNGVAWANDNTEVIAFAKQNK--GYTVGIDS 229 Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGI 279 + S+ +APA+ +G+ +W + + T + + + DT D + L + Sbjct: 230 LGSQDTIAPAVSKGNETLL---NWINDEIKTLGKENFFHADYDATLTDTYGADYKETLVV 286 Query: 280 DKSS 283 + Sbjct: 287 EGGE 290 >gi|292558665|gb|ADE31666.1| Major cell-binding factor precursor (CBF1) [Streptococcus suis GZ1] Length = 279 Score = 180 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 54/261 (20%), Positives = 104/261 (39%), Gaps = 21/261 (8%) Query: 5 FFVSILCLIILFFT----------SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN- 53 + + LI+L F + TN+ + I RG L+ G+ + F + Sbjct: 12 IRLLVFGLILLVFAKQPVAQTETPASITNSDQVQAIIDRGVLRVGVKQDVPNFGYKNPDT 71 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+++G ++D R ++ + D I++ P+ A+ R L + Q+D++ T R Sbjct: 72 GEFEGMEIDIARKIADELGVD---IEFTPVTAQTRGPLLDNSQVDMVIATFTITEER--K 126 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 L F Y D GF+++K GI + + L G +I V G+ T +++ + + + Sbjct: 127 LLYNFTTPYYTDAVGFLVNKDSGIKTFTDLDGKTIGVAQGSITRTLISELADKYGITVNF 186 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 E+ + RAHR D ++ D S L + ++ S S Sbjct: 187 AELGSYPELSVSLRAHRTDTFSVDQSILAGYISSKS-----ELMDFSFSASDYGIVTKLS 241 Query: 234 DTEWYNIVSWTHYAMVTAEEL 254 + + N ++ L Sbjct: 242 NKDLNNYLNSLVEKWTADGSL 262 >gi|116629192|ref|YP_814364.1| amino acid ABC transporter periplasmic protein [Lactobacillus gasseri ATCC 33323] gi|116094774|gb|ABJ59926.1| amino acid ABC transporter substrate-binding protein, PAAT family [Lactobacillus gasseri ATCC 33323] Length = 277 Score = 180 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 40/253 (15%), Positives = 97/253 (38%), Gaps = 13/253 (5%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 +++I +K+ + G+ F + G +GF+VD +AL+ + +K +++ Sbjct: 32 SSNIYEQVKESKTITWGVKADTRLFGLMSIKTGKIEGFEVDLAKALTKQMLGKNAKTEFV 91 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 K R L++ ID + T R+ + + + GQ ++ I +V Sbjct: 92 QTTPKTRIPLLKNGNIDAILATMTITPDRKKQVTFSE--PYFTAGQSLLVKDNSTIKNVK 149 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L+G + GTT + + + ++ + A +A + A T D L Sbjct: 150 DLNGKTALAVKGTTAVDNVKKFAPKA----KVLEYDDYGQAFTALKAGQGQAMTTDNGLL 205 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 + N + ++ + P A+ +G T++ + ++ ++ G + + Sbjct: 206 AGIASENKG---YKLVGGTYTSEPYGIAVEKGQTDFADRINKALN---ELKKNGTYHRLL 259 Query: 262 NQVSKDTTNPDVQ 274 + +++ Sbjct: 260 VKWFNGIPGFNIK 272 >gi|326384625|ref|ZP_08206303.1| extracellular solute-binding protein family 3 protein [Gordonia neofelifaecis NRRL B-59395] gi|326196592|gb|EGD53788.1| extracellular solute-binding protein family 3 protein [Gordonia neofelifaecis NRRL B-59395] Length = 328 Score = 180 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 55/243 (22%), Positives = 97/243 (39%), Gaps = 13/243 (5%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 S + I KRG L G + G + +GD KGFD+D +S+AIF DP+ I+Y Sbjct: 83 GSTMDRIAKRGRLVVGTDLGSNPLSFRDPISGDVKGFDIDVAHWISAAIFGDPNLIEYRM 142 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + R AL++ +DI+ + T R ++ Y Q + ++ GIS S Sbjct: 143 ITNDNRSEALENGTVDIVVKTMSITCDRLKTVSF--SVPYYAASQQILAYRNSGISQASD 200 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+G ++C +T+ + + + I + + + DA T D L Sbjct: 201 LAGKNVCATRSSTSIARVQEAVPSA----KFITTASWADCLVMMQQGQVDAITSDDPILA 256 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 + + ++ D + I +G + V+ A E G Q++ N Sbjct: 257 GIAAQDPW---VQVVGDSLGTEYYGVGIPKGQDDLVRFVNGVLAAR---EADGSWQRSYN 310 Query: 263 QVS 265 + Sbjct: 311 EWL 313 >gi|169631301|ref|YP_001704950.1| glutamine-binding protein GlnH [Mycobacterium abscessus ATCC 19977] gi|169243268|emb|CAM64296.1| Probable glutamine-binding protein GlnH [Mycobacterium abscessus] Length = 327 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 58/256 (22%), Positives = 106/256 (41%), Gaps = 11/256 (4%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQ 79 + N + I+KRG L G++ G F+ G+ GFDVD +S IF P +++ Sbjct: 78 AANDEAVAAIRKRGRLVVGLDIGSNLFSFRDPITGELTGFDVDIAGEVSRDIFGTPERVE 137 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 Y L++ +R AL++ +DI+ + T R + + + Q + + GI++ Sbjct: 138 YRILSSADRVAALKNSTVDIVVKTMTITCARRKEVNF--SSVYLMNYQRILTSRDSGITN 195 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 LSG +C GTT+ L+ + + A + + DA + D S Sbjct: 196 AQDLSGRRVCAARGTTSLNRLSQITP----PPVIMSVVTWADCLVALQQRQVDAVSTDDS 251 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQ 258 L L + P H+I P+ +S P I +T+ V+ T + + + Sbjct: 252 ILAGLM--SQDPYLHIIGPN-MSDEPYGIGIKLENTDLVRYVNRTLERIRRDGTWNALYR 308 Query: 259 KNINQVSKDTTNPDVQ 274 K ++ + P + Sbjct: 309 KWLSVLGPAPAPPSAK 324 >gi|302537785|ref|ZP_07290127.1| glutamate binding periplasmic protein [Streptomyces sp. C] gi|302446680|gb|EFL18496.1| glutamate binding periplasmic protein [Streptomyces sp. C] Length = 301 Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats. Identities = 53/251 (21%), Positives = 95/251 (37%), Gaps = 13/251 (5%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 + +KRG L G+ E A+G + GFD++ + +++++ DP I++ Sbjct: 49 ESRTWQKARKRGRLVVGVKEDQPYMGEKDPASGRYSGFDIEIAKMMAASLGFDPKTIEFK 108 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSV 140 + + R ALQ+ QID R+ +G A + GQ ++ + K I Sbjct: 109 TIASANRETALQNGQIDYYVGTYTINDNRKKQVGFA--GPYFMAGQSLLVRRNEKDIKGP 166 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L+G +C AG+T L F + ++ ++ DA + D S Sbjct: 167 EDLAGKKVCSAAGSTPYQRLQREFPKA----VLVAYDTYSVCVDNLLTYQVDAVSTDDSI 222 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L P E ++ + SK P + +GD + A E+ G +K Sbjct: 223 LLGYAA--KVPEELKVVGEPFSKEPYGIGVPRGDDALRFALDDALEA---DEKNGDWKKA 277 Query: 261 INQVSKDTTNP 271 + P Sbjct: 278 YEATLGLSGRP 288 >gi|166032314|ref|ZP_02235143.1| hypothetical protein DORFOR_02017 [Dorea formicigenerans ATCC 27755] gi|166028037|gb|EDR46794.1| hypothetical protein DORFOR_02017 [Dorea formicigenerans ATCC 27755] Length = 296 Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats. Identities = 51/258 (19%), Positives = 101/258 (39%), Gaps = 15/258 (5%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L +IKK G + G+ + F V NG+++G+DV F + + K+ ++ A Sbjct: 50 TLDEIKKDGTINIGVFSDKNPFGYVDENGEYQGYDVYFANRIGEDLG---VKVNFVSTEA 106 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 R LQ+ ++D++ N T R + A G + I S+ + + Sbjct: 107 ANRIEYLQTGKVDLILANFTVTDERAEEVDFAL--PYMNVALGVVSPDSNVIKSLDKWNS 164 Query: 146 AS-ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 + V +GTT E L + + ++ A A+ D + + A Sbjct: 165 KDQMIVISGTTAETYLTENYP----DIPLQKYDSYATAKNALENGNGVAWANDNTEVIAF 220 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 L N V + ++ +K +APA+ +G+ + W + + + + K+ + Sbjct: 221 ALQNK--GYTVGISELGNKDTIAPAVSKGNDTLLD---WVNEEIKSLGDEQFFHKDYEET 275 Query: 265 SKDTTNPDVQRFLGIDKS 282 DT D + L ++ Sbjct: 276 LVDTYGKDYEEELVVEGG 293 >gi|126433143|ref|YP_001068834.1| extracellular solute-binding protein [Mycobacterium sp. JLS] gi|126232943|gb|ABN96343.1| amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium sp. JLS] Length = 331 Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats. Identities = 59/264 (22%), Positives = 111/264 (42%), Gaps = 13/264 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDD 74 F T +A++ I++RG L G++ G F+ GD GFDVD ++ IF Sbjct: 78 FPTRAEADAAV-AYIRERGRLIVGLDIGSNLFSFRDPITGDITGFDVDIAGEIARDIFGS 136 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 P+++ Y L++ +R +ALQ+ Q+D++ + T R+ +G + Q + + Sbjct: 137 PAQVDYRILSSADRIVALQNNQVDVVVKTMTITCERKKKVGF--STVYLNADQRILAPRD 194 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I+ + LSG +CV GTT+ + + + A + + DA Sbjct: 195 SAITRAADLSGRRVCVVKGTTSLRRVQQISP----PPIIVSTVTWADCLVALQQRQVDAV 250 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE- 253 + D + L L P H++ P +++ P + +T V+ T + Sbjct: 251 STDDAILAGLVAQ--DPYLHIVGPS-MNQEPYGIGVNLENTGLVRFVNGTLQRIRNDGTW 307 Query: 254 LGITQKNINQVSKDTTNPDVQRFL 277 + +K + V P V R++ Sbjct: 308 YALYRKWL-TVLGPAPAPPVARYV 330 >gi|113866797|ref|YP_725286.1| ABC transporter periplasmic protein [Ralstonia eutropha H16] gi|113525573|emb|CAJ91918.1| ABC-type transporter, periplasmic component: PAAT family [Ralstonia eutropha H16] Length = 303 Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats. Identities = 41/250 (16%), Positives = 85/250 (34%), Gaps = 10/250 (4%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQYL 81 L IK G + G + F+ + G+ + + + + +++ Sbjct: 34 TLKKIKDSGVISLGYRESSIPFSYTDGK-EVMGYSHEILLQIVDKVKSELKMPGLQMRLT 92 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 P+ ++ R +Q+ IDI +T L R+ + + + G + K G+ + Sbjct: 93 PITSQNRIPLVQNGTIDIECGSTTNNLERQKQVAFSNS--MFVYGIKMLTRKDSGVKEFT 150 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L ++ AGTT E L M + I + + R A+ D L Sbjct: 151 DLKDRNVVTTAGTTGERLLVKMNGEKAMNMNLISTKDHGQSFLILETGRAAAFVMDEPLL 210 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 Y + ++ V++ + A + D + + + T+ G +K Sbjct: 211 YGERTKAKSAADWVVVGAPLQTENYACMFRKDDPSFKKLADGVIADLQTS---GRAEKLY 267 Query: 262 NQVSKDTTNP 271 N+ P Sbjct: 268 NKWFMSPIPP 277 >gi|222109803|ref|YP_002552067.1| family 3 extracellular solute-binding protein [Acidovorax ebreus TPSY] gi|221729247|gb|ACM32067.1| extracellular solute-binding protein family 3 [Acidovorax ebreus TPSY] Length = 296 Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats. Identities = 43/271 (15%), Positives = 91/271 (33%), Gaps = 8/271 (2%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K + ++ + L + +L ++ G L V F+ V G G+ +D Sbjct: 4 KQGWKALGAAVALCCAVGAQAQGVLERVRGGGPLVLAHRESSVPFSYVHE-GKPMGYALD 62 Query: 63 FCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 C ++ + +Q + + R +++ + D+ +T R + Sbjct: 63 LCLHIAEVVRKKTGMKNMPVQLVQVTPANRIEMVKTGKADMECGSTTNNAERRKDVAFTI 122 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + G ++ ++ + L G + GTT + M+ + Sbjct: 123 --PHFITGARLLVPAASTVTRMEDLEGKKLVSTKGTTPYKAAEQANRERLMRIQLVEAPD 180 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E + DA+ D LY L P ++ ++ PLA + + D E+ Sbjct: 181 HEAAVVMVEKGQADAFVMDDVLLYGLAANRPDPKALKVVGRFVTTEPLAIMLPKNDPEFK 240 Query: 239 NIVSWTHYAMVTAEELG-ITQKNINQVSKDT 268 +V ++ + E+ I K Q T Sbjct: 241 KLVDEEMRRLIVSNEINAIYDKWFMQPIAPT 271 >gi|116492193|ref|YP_803928.1| amino acid ABC transporter periplasmic protein [Pediococcus pentosaceus ATCC 25745] gi|116102343|gb|ABJ67486.1| amino acid ABC transporter substrate-binding protein, PAAT family [Pediococcus pentosaceus ATCC 25745] Length = 278 Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats. Identities = 47/286 (16%), Positives = 101/286 (35%), Gaps = 24/286 (8%) Query: 1 MYKDF----FVSILCLIILFFTSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAEVK 51 M K + L ++ +S +K + G+ F + Sbjct: 1 MRKILKSVALIFTLMASLVLLSSCGAKGEVKNIDAWDQAQKTDSITWGVKADTKLFGLMD 60 Query: 52 -ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 + KGFD+D +AL+ + +K ++ + ++ R L++ +D + T R Sbjct: 61 VKDSQIKGFDIDIAKALTKQMLGKKAKANFIQVTSQTRIPLLKNGNLDAIIATMTITKER 120 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHN 168 E + + + GQ ++ K I SV L+ G + G+ + + + Sbjct: 121 EKVVDFSNS--YFDAGQSLLVKKGSSIKSVKDLNKPGTKVIGVVGSNSVENIKKFAPKAQ 178 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 I + + A ++ + A T D L+ + + N + ++ +K P Sbjct: 179 ----VIQLQDYAQALTALKSGQGAALTTDNGILFGMAVDNPN---YQVVGKAFTKEPYGI 231 Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 AI +G + ++ EE G K + + + D + Sbjct: 232 AINKGQGQLKKHLNQALK---ELEESGEYNKLVEKWFGNIAGFDYK 274 >gi|225378340|ref|ZP_03755561.1| hypothetical protein ROSEINA2194_04001 [Roseburia inulinivorans DSM 16841] gi|225209777|gb|EEG92131.1| hypothetical protein ROSEINA2194_04001 [Roseburia inulinivorans DSM 16841] Length = 299 Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats. Identities = 60/310 (19%), Positives = 111/310 (35%), Gaps = 42/310 (13%) Query: 1 MYK--DFFVSILCLIILF-----------FTSFSTNAS--------------ILGDIKKR 33 M K ++L L + T+ + +A+ L +IK+ Sbjct: 1 MKKWNRILAAVLTLSLTAGLTACGGSTSDATANNASAADEGTVSNGSSEVYRTLDEIKES 60 Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 G + G+ + F V NG+++G+D+ F L + D + ++ A R LQ Sbjct: 61 GTINIGVFSDKNPFGYVDENGEYQGYDIYFANRLGEDLGVD---VNFVSTEAANRIEYLQ 117 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQA 152 + ++DI+ N T R + A G + K I ++ + V + Sbjct: 118 TGKVDIILANFTVTDERAEEVDFAL--PYMNVALGVVSPDSKVIENLDDWDSNDQMIVIS 175 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 GTT E + D + ++ A A+ D + + A L N Sbjct: 176 GTTAETYMIDNYP----DIPLQKYDSYATAKNALENGSGAAWVNDNTEVIAYALQNT--G 229 Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272 V +P + S +APA+ +G+T + W + + T E + DT D Sbjct: 230 YTVGIPSLGSNDTIAPAVSKGNTTLLD---WINDEIKTLGEEQFFHADYEATLVDTYGSD 286 Query: 273 VQRFLGIDKS 282 + L ++ Sbjct: 287 YEESLVVEGG 296 >gi|288871529|ref|ZP_06117940.2| CjaA protein [Clostridium hathewayi DSM 13479] gi|288863100|gb|EFC95398.1| CjaA protein [Clostridium hathewayi DSM 13479] Length = 300 Score = 180 bits (456), Expect = 3e-43, Method: Composition-based stats. Identities = 61/305 (20%), Positives = 108/305 (35%), Gaps = 36/305 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS---------------------ILGDIKKRGFLKCG 39 M K + + L + S + S L +IK+ G + G Sbjct: 8 MKKIRKLVTVTLTLSLAFSLAACGSENSSNNNVTANSRKTQNVVYRTLDEIKESGTINIG 67 Query: 40 INTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99 + + F V NG+++G+DV F + + KI Y+ A R LQ+ + DI Sbjct: 68 VFSDKNPFGYVDENGEYQGYDVYFANRIGEDLG---VKINYISTEAANRIEYLQTGKADI 124 Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTEL 158 + N T R + A G + + I S+ + I V +GTT E Sbjct: 125 ILANFTVTPQRAEEVDFAL--PYMNVALGVVSPDSRVIESLDNWNAEDPIIVISGTTAET 182 Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218 L + + ++ A A+ D + + A L N V +P Sbjct: 183 YLIENYP----DIPLQKYDSYATAKNALENGNGAAWANDNTEVIAFALQNA--GYTVGIP 236 Query: 219 DIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLG 278 + S+ +APA+ +G++ + W + + E K+ DT D + L Sbjct: 237 SLGSQDSIAPAVSKGNSTLLD---WLNEEIKALGEEQFFHKDYEATLVDTYGLDYEDSLV 293 Query: 279 IDKSS 283 ++ Sbjct: 294 VEGGK 298 >gi|240168877|ref|ZP_04747536.1| putative glutamine-binding lipoprotein [Mycobacterium kansasii ATCC 12478] Length = 328 Score = 180 bits (456), Expect = 3e-43, Method: Composition-based stats. Identities = 67/263 (25%), Positives = 108/263 (41%), Gaps = 11/263 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDD 74 F T +A++ +I +RG L G++ G F+ GD GFDVD ++ IF Sbjct: 75 FRTKAEADAAV-ANIHERGRLIVGLDIGSNLFSFRDPITGDITGFDVDIAGEVARDIFGS 133 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 PS ++Y L+A ER ALQ+ Q+D++ + T R + + Q + + Sbjct: 134 PSHVEYRILSAAERITALQTSQVDVVVKTMTITCERRKLVNF--STVYLDANQRILAPRD 191 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 IS VS LSG +CV GTT+ + + + + A + + DA Sbjct: 192 SSISKVSDLSGKRVCVARGTTSLRRIREIAP----PPVIVSVVNWADCLVAMQQRQIDAV 247 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 + D S L L + P H++ PD ++ P I +T V+ T + T Sbjct: 248 STDDSILAGL--VEEDPYLHIVGPD-MANQPYGIGINLDNTGLVRFVNGTLERIRTDGTW 304 Query: 255 GITQKNINQVSKDTTNPDVQRFL 277 + V P R+L Sbjct: 305 NTLYRKWLSVLGPAPVPPQPRYL 327 >gi|227893075|ref|ZP_04010880.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus ultunensis DSM 16047] gi|227865126|gb|EEJ72547.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus ultunensis DSM 16047] Length = 273 Score = 180 bits (456), Expect = 3e-43, Method: Composition-based stats. Identities = 55/278 (19%), Positives = 114/278 (41%), Gaps = 17/278 (6%) Query: 2 YKDFFVSILCLIILFF--TSFSTN--ASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDW 56 K F+S +I+L F T+ S N +I +K+ + G+ F + +G Sbjct: 3 KKKLFLSTFFIILLSFMLTACSQNKKQTIYETVKENKTINWGVKADTPLFGSMSIKSGKV 62 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GF++D AL+ I +K ++ A + L+++ +D + T R+ + Sbjct: 63 NGFEIDLANALTHKILGKDAKANFVTTTANTKIQLLKNRNVDAVIAAMTITPERKKQVDF 122 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + GQ ++ I + L+ + V GTT+ AD K + K + + Sbjct: 123 --SKPYFPAGQSVMVSDHSKIKNAKDLNKQKVLVVKGTTS----ADAVKKVSPKAEILQY 176 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + AA +A++ +A D L + D P + ++ + P A+ +G + Sbjct: 177 DDYGQAFAALKANQGNALVTDNGILAGI--LRDNPG-YRVVGGTFTNQPYGIAVDKGQST 233 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 ++ + A+ E+ G Q+ I + + +V+ Sbjct: 234 ---MMRKINLALNQLEKDGTYQRLIKKWFSNIPGFNVK 268 >gi|170288143|ref|YP_001738381.1| extracellular solute-binding protein [Thermotoga sp. RQ2] gi|170175646|gb|ACB08698.1| extracellular solute-binding protein family 3 [Thermotoga sp. RQ2] Length = 246 Score = 180 bits (456), Expect = 3e-43, Method: Composition-based stats. Identities = 51/265 (19%), Positives = 109/265 (41%), Gaps = 21/265 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V +L + I+ F+ ++ +IK RG+L G++ F V +G+ GFD Sbjct: 1 MKKLLVVLVLLVSIVIFSG------VINEIKSRGYLLVGLSADFPPFEFVDESGNIVGFD 54 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + ++ + + ++ + + +L +K+ID++ T R+ + Sbjct: 55 VDLAKEIARRLGVE---LKIVDMTFDGLIPSLLTKKIDVIISGMTITEERKKVVAF--SD 109 Query: 121 ITYFDGQGFIMHKKKGI--SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + GQ ++ K + L G ++ VQ GTT ++ ++ Y + F++ Sbjct: 110 PYFDAGQVIVVRKDSDFRPKTYEDLVGKTVAVQIGTTGDIEVSKY-----EGIKVVRFDK 164 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + + R DA D + A N + VI ++S A+ + DT+ Sbjct: 165 FTDAFLELKRGRADAVVLDSATARAFVAKNP---DLVISSGVLSSEQYGIAVRKEDTDLL 221 Query: 239 NIVSWTHYAMVTAEELGITQKNINQ 263 ++ + + + +K ++ Sbjct: 222 EFINSVLRELKKSPYDVLIEKWFSE 246 >gi|313885660|ref|ZP_07819409.1| ABC transporter glutamine-binding protein GlnH [Eremococcus coleocola ACS-139-V-Col8] gi|312619025|gb|EFR30465.1| ABC transporter glutamine-binding protein GlnH [Eremococcus coleocola ACS-139-V-Col8] Length = 278 Score = 180 bits (456), Expect = 3e-43, Method: Composition-based stats. Identities = 52/272 (19%), Positives = 104/272 (38%), Gaps = 18/272 (6%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIK----KRGFLKCGINTGLVGFAEVK-ANGDWKGF 59 F ++ +L F+ T+ S ++ K + GI F NG+ +GF Sbjct: 15 IFTLLVITFVLVFSKAGTSVSQPDIVQRLSNKDQTIVWGIKNDTKLFGFYNIENGEIEGF 74 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D + L+ + D +++ + +K R L++ ID + R+ + Sbjct: 75 DIDVAKELTKRLTGDSKHAKFVEVTSKTRIPLLRNGNIDAIIATMTINEARKKVVDF--T 132 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + GQ ++ K I+S+ L + ++ G+T+ + I E Sbjct: 133 DTYFDAGQSLLVAKDSKINSIDNLDASTTVVSVKGSTSSQNIKKLAPQA----KLIELET 188 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E A +A + DA T D + L L N + + + ++ P A+ + ++ Sbjct: 189 YAEGLTALKAGQGDALTTDNAILLGLISENP---DFRLAGENFTEEPYGIAVNKNQADFK 245 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 N ++ AM G QK ++ + N Sbjct: 246 NQLNQALAAMKA---DGTYQKIYDKWFAEVLN 274 >gi|317049447|ref|YP_004117095.1| family 3 extracellular solute-binding protein [Pantoea sp. At-9b] gi|316951064|gb|ADU70539.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b] Length = 274 Score = 180 bits (456), Expect = 3e-43, Method: Composition-based stats. Identities = 60/231 (25%), Positives = 95/231 (41%), Gaps = 10/231 (4%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 T+A L DIK RG L G+ + + NG+ GF++ R +++ + P KI+ + Sbjct: 22 THADTLSDIKARGVLTVGVKNDYPPYGYMDNNGNTVGFEISLARYIANELLGSPDKIKLV 81 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 P+NA R L S QIDI+ T R + ++ G + K + Sbjct: 82 PVNASNRMQFLNSGQIDIIMATLGVTPDRAKQIDFTDEYVS-AAGPSILARKAVKFTQWE 140 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 QL G IC G+ T+ + + F + E A + +RC A D +L Sbjct: 141 QLKGQKICGIQGSYFNKTVTE-----KYGLQLVNFTALPEAYRALQDNRCVAMVFDDMSL 195 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 KL S++ I P+A + +GD + V A+V AE Sbjct: 196 QN-KLKEPGWSDYKIAVKPYEYLPMAGGLRKGDDAFRAAVD---KAIVKAE 242 >gi|108797521|ref|YP_637718.1| extracellular solute-binding protein [Mycobacterium sp. MCS] gi|119866607|ref|YP_936559.1| extracellular solute-binding protein [Mycobacterium sp. KMS] gi|108767940|gb|ABG06662.1| amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium sp. MCS] gi|119692696|gb|ABL89769.1| amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium sp. KMS] Length = 331 Score = 180 bits (456), Expect = 3e-43, Method: Composition-based stats. Identities = 59/264 (22%), Positives = 112/264 (42%), Gaps = 13/264 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDD 74 F T +A++ I++RG L G++ G F+ GD GFDVD ++ IF Sbjct: 78 FPTRAEADAAV-AYIRERGRLIVGLDIGSNLFSFRDPITGDITGFDVDIAGEIARDIFGS 136 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 P+++ Y L++ +R +ALQ+ Q+D++ ++ T R+ +G + Q + + Sbjct: 137 PAQVDYRILSSADRIVALQNNQVDVVVKSMTITCERKKKVGF--STVYLNADQRILAPRD 194 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I+ + LSG +CV GTT+ + + + A + + DA Sbjct: 195 SAITRAADLSGRRVCVVKGTTSLRRVQQISP----PPIIVSTVTWADCLVALQQRQVDAV 250 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE- 253 + D + L L P H++ P +++ P + +T V+ T + Sbjct: 251 STDDAILAGLVAQ--DPYLHIVGPS-MNQEPYGIGVNLENTGLVRFVNGTLQRIRNDGTW 307 Query: 254 LGITQKNINQVSKDTTNPDVQRFL 277 + +K + V P V R++ Sbjct: 308 YALYRKWL-TVLGPAPAPPVARYV 330 >gi|302866037|ref|YP_003834674.1| family 3 extracellular solute-binding protein [Micromonospora aurantiaca ATCC 27029] gi|315502596|ref|YP_004081483.1| extracellular solute-binding protein family 3 [Micromonospora sp. L5] gi|302568896|gb|ADL45098.1| extracellular solute-binding protein family 3 [Micromonospora aurantiaca ATCC 27029] gi|315409215|gb|ADU07332.1| extracellular solute-binding protein family 3 [Micromonospora sp. L5] Length = 311 Score = 180 bits (456), Expect = 4e-43, Method: Composition-based stats. Identities = 50/260 (19%), Positives = 94/260 (36%), Gaps = 8/260 (3%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 + + IK G + G+ A G GFD++ + ++S + DP+KI Sbjct: 58 ANVAGSPAFEKIKSAGKVVIGVKFDQPNLGYKDAQGKRCGFDIEIAQYVASTLGVDPAKI 117 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGI 137 +Y + + R A++ +ID T R+ + A + GQ ++ K I Sbjct: 118 EYKEIASANRETAIKGGEIDYYVGTYSITDKRKNDVSFA--GPYFVAGQDLLVRKDESSI 175 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + L G +C G+T + D + + + F+ E + + DA T D Sbjct: 176 TGKDTLKGKKVCSATGSTPIQKIRD--EGLTEGENIVEFKTYSECVSQLLDKKVDAVTTD 233 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL-GI 256 + L P E ++ S + + D + V+ A T I Sbjct: 234 DAILKGYAAQ--NPDELKVVGQPFSTEKYGIGLPKDDKALRDYVNDQIEAAFTDGTWKKI 291 Query: 257 TQKNINQVSKDTTNPDVQRF 276 + + T P ++R+ Sbjct: 292 YDGTLGKSGSPATPPQLERY 311 >gi|170744198|ref|YP_001772853.1| extracellular solute-binding protein [Methylobacterium sp. 4-46] gi|168198472|gb|ACA20419.1| extracellular solute-binding protein family 3 [Methylobacterium sp. 4-46] Length = 298 Score = 180 bits (456), Expect = 4e-43, Method: Composition-based stats. Identities = 49/269 (18%), Positives = 96/269 (35%), Gaps = 10/269 (3%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 VS ++ T S + L IK G + G + F+ + + GF +D C Sbjct: 10 VSCALVLSFATTVASAESPTLTKIKSNGSVTLGYREASIPFSYLGTDQKPVGFSLDLCAQ 69 Query: 67 LSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + + I D ++ P+++ R +Q+ ID+ T ++ R + Sbjct: 70 VVAKIKSDLKLDTLAVKLQPVDSTNRIPLIQNGTIDMECGATSSSVARLKQVAFTVAI-- 127 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 + ++ GI V L G ++ G+ + A KA ++ I + E Sbjct: 128 FVSSARWLTKVSSGIHDVKDLDGKTVVATQGS-NAVGFAFGIKAKGGTFNVIQAKDHGES 186 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 ++ R A+ D L +LK P+ LP+ + P + + D E + Sbjct: 187 MLTLQSGRAAAFMEDDILLASLKARTPDPAAFAFLPETYTLVPYGLMLPRDDVELKALAD 246 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNP 271 M+ + G + + + P Sbjct: 247 GVLKDMMAS---GAFTRLYAKWFESPIPP 272 >gi|295398550|ref|ZP_06808583.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Aerococcus viridans ATCC 11563] gi|294973214|gb|EFG49008.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Aerococcus viridans ATCC 11563] Length = 271 Score = 179 bits (455), Expect = 4e-43, Method: Composition-based stats. Identities = 52/282 (18%), Positives = 108/282 (38%), Gaps = 20/282 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKR------GFLKCGINTGLVGFAEVK-AN 53 M K + + L T+ +++A+ DI +R + G+ F + A Sbjct: 1 MKKLWRIVALVAFAFLATACTSSAASQQDIAERIDSEAYPVITWGVKVDTNLFGKYNIAE 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 +GFD+D + +++ + + ++ +++ + +K R L++ +D L T R Sbjct: 61 NRIEGFDIDMAKEITNRVGGENAEAEFVEVTSKTRIPLLKNGNVDALIATMTITEDRLKQ 120 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYH 172 + + + + GQ ++ + I V L S ++ G+T+ + + N Sbjct: 121 VDFSQ--VYFDAGQALMVPEDSDIEGVESLTSEHTVLAVKGSTSAQRIKEAAPDAN---- 174 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + E E A ++ + D T D + L + N + I + P AI + Sbjct: 175 VLELENYAEAFTALKSGQGDTMTTDNAILLGIMEQNPG---YKIAGSTFTNEPYGIAINK 231 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 G + N V+ MV G Q+ + D T + Sbjct: 232 GQDAFLNEVNQAIDDMVA---DGTYQEIYAKWFGDDTESSIA 270 >gi|220909135|ref|YP_002484446.1| family 3 extracellular solute-binding protein [Cyanothece sp. PCC 7425] gi|219865746|gb|ACL46085.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7425] Length = 300 Score = 179 bits (455), Expect = 5e-43, Method: Composition-based stats. Identities = 54/290 (18%), Positives = 115/290 (39%), Gaps = 19/290 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K + + ++L + S+L + K G L G + FA + G+ G+ V+ Sbjct: 4 KFACLGLATFLLLSCPGLAQAHSVLEKVVKSGVLTAGTSKDAFPFAYRDSQGNLTGYSVE 63 Query: 63 FCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 + ++ + + P K++ + L+ +ER LQ +DI+ + +T RE + + Sbjct: 64 MLKLINEQVSKELNQPIKLELVALDPQERIAKLQQGAVDIVCDFSSFTWKREADVDFSVS 123 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 G ++ + +S + L G I V GTT ++ L + + ++F+ Sbjct: 124 --YAITGTRLLVKRNSPLSDPASLVGKRIGVLPGTTAQVAL----RKAQPQAQIVLFQDR 177 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + A +A + DA+ D L + S +A + + ++ + + Sbjct: 178 NKAYQAIQAGQIDAFADDDVLLEDWLFRTKNDKTFQVASYPYSNEGVACMLPENNSTFRD 237 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEAL 289 V+ Y+++ + +TQK N D R+ G + + L Sbjct: 238 TVN---YSLIRFMQGLLTQKTPNVDLFD-------RWFGPQGIAPLTVDL 277 >gi|332108376|gb|EGJ09600.1| extracellular solute-binding protein family 3 [Rubrivivax benzoatilyticus JA2] Length = 300 Score = 179 bits (455), Expect = 5e-43, Method: Composition-based stats. Identities = 48/252 (19%), Positives = 87/252 (34%), Gaps = 7/252 (2%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC- 64 I L S T L IK + G+ F+ + N G+ VD C Sbjct: 9 LAVITLLAACGVASAQTPGDTLSRIKSTKTITLGVREAARPFSFLDENKRPVGYSVDLCL 68 Query: 65 ---RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 L + ++QY ++ ER L +++ID+ +T T R+ + Sbjct: 69 AAVDELKRELKLPELQVQYKVVSGAERIPKLLAREIDLECGSTTNTKARQEQVAF--SYT 126 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + + K ++++ L G + + GTT+E + + VF E Sbjct: 127 MFVAQMRVLTPKDTPVTTLKDLDGLPLALSKGTTSEKLFTRLAETE-VNLKLQVFPSNTE 185 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 AA +A + A+ D + L L + + + +S P + D V Sbjct: 186 AYAALKAGKVRAFAQDDALLQGLASADGAADKFQLSTLALSVEPYGVMARKDDKALLAAV 245 Query: 242 SWTHYAMVTAEE 253 T + + E Sbjct: 246 DRTLGRLYASGE 257 >gi|327394992|dbj|BAK12414.1| glutamine-binding protein precursor GlnH [Pantoea ananatis AJ13355] Length = 280 Score = 179 bits (455), Expect = 5e-43, Method: Composition-based stats. Identities = 55/279 (19%), Positives = 106/279 (37%), Gaps = 21/279 (7%) Query: 4 DFFVSILCLIILFF---------TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54 F ++ ++ L T+ + AS L + +RG L+ G F G Sbjct: 12 RFLPALFTVVALAGCTPTDNKKETAGAAPASTLQTVLQRGTLRVGDCLSFAPFGFYDKAG 71 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + G+DVD +AL+ A+ K++ + + R LQ+ ++D++ N L R + Sbjct: 72 NPDGYDVDLAKALAKAMG---VKLEMVNTTSANRIPNLQTNKVDVVFCNFTRNLERAKEI 128 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 G + ++ K GI S ++G +I G+T D ++ + Sbjct: 129 GFTQ--PYVVASEAMLVRKVSGIKSAHDMAGKTIATVKGSTN----GDEVRSMGIDVKIQ 182 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 ++ + A + + DA D + L P+ V ++ A + QGD Sbjct: 183 EYDSSQAAILAVKQGQADAMIEDNNFLAYQAKL--DPTLEVTNEALVPLEYNAFGVKQGD 240 Query: 235 TEWYNIVSWTHYAMVTAEELG-ITQKNINQVSKDTTNPD 272 W N ++ + + + E + QK + NP Sbjct: 241 QVWTNYLNEFLFEINASGENAQLYQKWFGSKPRYPLNPQ 279 >gi|298290398|ref|YP_003692337.1| extracellular solute-binding protein family 3 [Starkeya novella DSM 506] gi|296926909|gb|ADH87718.1| extracellular solute-binding protein family 3 [Starkeya novella DSM 506] Length = 274 Score = 179 bits (455), Expect = 5e-43, Method: Composition-based stats. Identities = 53/256 (20%), Positives = 96/256 (37%), Gaps = 14/256 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + ++I + + + +A L D+K +G L G+ + + G+ GF+V Sbjct: 1 MRTSILTIAASLAMTLGIGAASADTLADVKAKGTLTIGVKNDYPPYGFLNDKGEIVGFEV 60 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D + ++ + K + +P+ A R L S +IDI+ T R + + Sbjct: 61 DLGKYIAKELLGPEGKFELVPVVAANRIEFLNSGRIDIILATLGVTEERGKVIDFSE--- 117 Query: 122 TYFDGQG--FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G I K S +L G ++C G+ L + ++ F+ Sbjct: 118 YYVSAPGPSVIAPKAATFSKWEELKGLTLCGIQGSYYNKHL-----SGDLGIQLTAFKTQ 172 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A + +RC + D L K + + I D P A I + D + + Sbjct: 173 PEAYRALKDNRCVGFVFDDMTLR-QKTEEADWAGYKIAVDPYEYIPQAAGIRKNDVAFRD 231 Query: 240 IVSWTHYAMVTAEELG 255 V+ A+ AE G Sbjct: 232 AVN---KAITKAEAEG 244 >gi|238063458|ref|ZP_04608167.1| glutamate binding protein [Micromonospora sp. ATCC 39149] gi|237885269|gb|EEP74097.1| glutamate binding protein [Micromonospora sp. ATCC 39149] Length = 326 Score = 179 bits (455), Expect = 5e-43, Method: Composition-based stats. Identities = 51/263 (19%), Positives = 96/263 (36%), Gaps = 14/263 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 + + IK G + G+ A G GFD++ + ++S + DP+KI Sbjct: 73 ANVAGSPTFDKIKSSGKVTVGVKFDQPNLGYKDAQGKRCGFDIEIAQYVASTLGVDPAKI 132 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGI 137 +Y + + R A++ +ID T R+ + A + GQ ++ K I Sbjct: 133 EYKEIASANRETAIKGGEIDYYVGTYSITDKRKNDISFA--GPYFIAGQDLLVRKDETTI 190 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + L G +C G+T + D + + + F+ E + + DA T D Sbjct: 191 TGKDTLKGKKVCSATGSTPIQKVRD--EGLTEPENIVEFKTYSECVSQLLDKKVDAVTTD 248 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 + L P E + S + + D + V+ A A + G Sbjct: 249 DAILKGYAAQ--NPDELKVAGQPFSTEKYGIGLPKDDKALRDYVNDQIEA---AAKDGTW 303 Query: 258 QKNINQVSKDT----TNPDVQRF 276 QK + + + P ++R+ Sbjct: 304 QKIYDGTLGKSGSAGSPPALERY 326 >gi|291618612|ref|YP_003521354.1| GlnH [Pantoea ananatis LMG 20103] gi|291153642|gb|ADD78226.1| GlnH [Pantoea ananatis LMG 20103] Length = 280 Score = 179 bits (455), Expect = 5e-43, Method: Composition-based stats. Identities = 55/279 (19%), Positives = 106/279 (37%), Gaps = 21/279 (7%) Query: 4 DFFVSILCLIILFF---------TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54 F ++ ++ L T+ + AS L + +RG L+ G F G Sbjct: 12 RFLPALFTVVALAGCTPTDNKNETAGAAPASTLQTVLQRGTLRVGDCLSFAPFGFYDKAG 71 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + G+DVD +AL+ A+ K++ + + R LQ+ ++D++ N L R + Sbjct: 72 NPDGYDVDLAKALAKAMG---VKLEMVNTTSANRIPNLQTNKVDVVFCNFTRNLERAKEI 128 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 G + ++ K GI S ++G +I G+T D ++ + Sbjct: 129 GFTQ--PYVVASEAMLVRKVSGIKSAHDMAGKTIATVKGSTN----GDEVRSMGIDVKIQ 182 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 ++ + A + + DA D + L P+ V ++ A + QGD Sbjct: 183 EYDSSQAAILAVKQGQADAMIEDNNFLAYQAKL--DPTLEVTNEALVPLEYNAFGVKQGD 240 Query: 235 TEWYNIVSWTHYAMVTAEELG-ITQKNINQVSKDTTNPD 272 W N ++ + + + E + QK + NP Sbjct: 241 QVWTNYLNEFLFEINASGENAQLYQKWFGSKPRYPLNPQ 279 >gi|77415016|ref|ZP_00791094.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus agalactiae 515] gi|77158934|gb|EAO70167.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus agalactiae 515] Length = 200 Score = 179 bits (455), Expect = 5e-43, Method: Composition-based stats. Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 8/197 (4%) Query: 2 YKDFFVSIL--CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKG 58 K + +L I L F ST+A+ L +IKK G LK G+ + F A ++G Sbjct: 4 RKRLTLYLLSCIFIFLLFYPNSTSANQLSEIKKSGVLKVGVKQDVPNFGYHNAETNQYEG 63 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 ++D + ++ ++ P ++P A+ R + + QIDIL T R+ Sbjct: 64 MEIDIAKKIAKSLGVKPV---FVPTTAQTREPLMDNGQIDILIATYTITPERKA--NYNI 118 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y D GF++ K I ++ +L G I V G TT++ L Y K H +K+ Sbjct: 119 SKAYYHDEIGFLVRKNSHIKTIKELDGKHIGVAQGATTKVNLEKYAKEHKLKFSYAXLGS 178 Query: 179 VEEIDAAYRAHRCDAYT 195 E+ + A+R DA++ Sbjct: 179 FPELAISLYANRIDAFS 195 >gi|167750530|ref|ZP_02422657.1| hypothetical protein EUBSIR_01506 [Eubacterium siraeum DSM 15702] gi|167656456|gb|EDS00586.1| hypothetical protein EUBSIR_01506 [Eubacterium siraeum DSM 15702] Length = 294 Score = 179 bits (455), Expect = 5e-43, Method: Composition-based stats. Identities = 60/304 (19%), Positives = 111/304 (36%), Gaps = 35/304 (11%) Query: 1 MYKDFFVSILCLIIL------FFTSFSTNAS--------------ILGDIKKRGFLKCGI 40 M K F ++ L + FT+ TNA+ L +IK G + G+ Sbjct: 1 MKKLNFKKLIALGLTAAAAVASFTACGTNATSGGSDGNTGSKVYRTLDEIKASGKINIGV 60 Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 + F V NG+++G+D+ F L + + I Y+ A R L++ ++DI+ Sbjct: 61 FSDKNPFGYVDENGEYQGYDIYFANRLGKDLGVE---INYVSTEAANRVEYLETGKVDII 117 Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTELT 159 N T R + A G + I+S+ + V +GTT EL Sbjct: 118 LANFTVTEERAEKVDFAL--PYMNVALGVVSPDSNVITSLDNWKAEDRMIVISGTTAEL- 174 Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219 Y + ++ +A A+ D + + A N V + Sbjct: 175 ---YLTKNYPDIKLQKYDSYATAKSAIENGNGVAWANDNTEVIAFAKQNK--GYTVGIDS 229 Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGI 279 + S+ +APA+ +G+ +W + + T + + + DT D + L + Sbjct: 230 LGSQDTIAPAVSKGNETLL---NWINDEIKTLGKENFFHADYDATLTDTYGADYKETLVV 286 Query: 280 DKSS 283 + Sbjct: 287 EGGE 290 >gi|254818982|ref|ZP_05223983.1| GlnH [Mycobacterium intracellulare ATCC 13950] Length = 325 Score = 179 bits (454), Expect = 6e-43, Method: Composition-based stats. Identities = 63/263 (23%), Positives = 105/263 (39%), Gaps = 11/263 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDD 74 F T +A++ DI+ RG L G++ G F+ G+ GFDVD ++ IF Sbjct: 72 FPTKAEADAAV-ADIRARGRLIVGLDIGSNLFSFRDPITGEITGFDVDLAGEIARDIFGA 130 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 PS ++Y L++ ER ALQ ++DI+ + T R + + Q + + Sbjct: 131 PSHVEYRILSSDERVTALQRGEVDIVVKTMTITCDRRKLVNF--STVYLDANQRILAPRD 188 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I VS LSG +CV GTT+ + + + + A + DA Sbjct: 189 SSIVKVSDLSGKRVCVAKGTTSLHRIRQI----DPPPVIVSVVNWADCLVAMQQREIDAV 244 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 + D S L L + P H++ P++ ++ P I +T V+ T + Sbjct: 245 STDDSILAGL--VEEDPYLHIVGPNMATQ-PYGIGINLNNTPLVRFVNGTLERIRRDGTW 301 Query: 255 GITQKNINQVSKDTTNPDVQRFL 277 + V P R+L Sbjct: 302 NTLYRKWLTVLGPAPAPPTPRYL 324 >gi|158313076|ref|YP_001505584.1| extracellular solute-binding protein [Frankia sp. EAN1pec] gi|158108481|gb|ABW10678.1| extracellular solute-binding protein family 3 [Frankia sp. EAN1pec] Length = 323 Score = 179 bits (454), Expect = 6e-43, Method: Composition-based stats. Identities = 52/257 (20%), Positives = 101/257 (39%), Gaps = 11/257 (4%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 S + ++ G + G F G+ +GFDV+ R ++ A+ K++++ Sbjct: 73 AGSTMAKLQSAGTITVGTKFDQPLFGLKNLRGEPEGFDVEIARIITDALGIPADKVKFVE 132 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVS 141 + R ++ ++D++ R+ + A Y GQ ++ I+ Sbjct: 133 TVSANREPFIEQHRVDLVVATYTINDKRKQVVDFA--GPYYVAGQTLMVRAGETAITGKD 190 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L+G +C +G+T A+ + +F+ + A +A + DA T D + L Sbjct: 191 TLAGKKVCSVSGSTP----AERIRTQAPDAELTLFDVYSKCAEALKAGQVDAVTTDNAIL 246 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE-LGITQKN 260 L + P ++ + S P I +GD E+ ++ T A T + Sbjct: 247 LGLM--DSDPGAFKLVGEPFSTEPYGIGIAKGDDEFRTFINDTLEAAYTDGRYETAYKDT 304 Query: 261 INQVSKD-TTNPDVQRF 276 I +V D T P V R+ Sbjct: 305 IGKVEPDMPTPPAVDRY 321 >gi|296167869|ref|ZP_06850052.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896994|gb|EFG76617.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 326 Score = 179 bits (454), Expect = 6e-43, Method: Composition-based stats. Identities = 60/269 (22%), Positives = 106/269 (39%), Gaps = 10/269 (3%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALS 68 L + F + + + + DI+ RG L G++ G F+ G+ GFDVD ++ Sbjct: 66 LTASLRPFPTKAQADAAVADIRARGRLIVGLDIGSNLFSFRDPITGEITGFDVDIAGEIA 125 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 IF PS ++Y L++ ER ALQ ++D++ + T R + + Q Sbjct: 126 RDIFGAPSHVEYRILSSDERVTALQRSEVDVVVKTMTITCERRKQVNF--STVYLDANQR 183 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 + + I+ V LSG +CV GTT+ + + + + A + Sbjct: 184 ILAPRDSPITKVGDLSGKRVCVAKGTTSLHRIRQI----DPPPVIVSVVNWADCLVAMQQ 239 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 DA + D S L L + P H++ P++ ++ P I +T V+ T + Sbjct: 240 REIDAVSTDDSILAGL--VEEDPYLHIVGPNMATQ-PYGIGINLTNTGLVRFVNGTLERI 296 Query: 249 VTAEELGITQKNINQVSKDTTNPDVQRFL 277 + V P R+L Sbjct: 297 RRDGTWNTLYRKWLTVLGPAPAPPTPRYL 325 >gi|311106718|ref|YP_003979571.1| extracellular solute-binding protein, family 3 family protein 6 [Achromobacter xylosoxidans A8] gi|310761407|gb|ADP16856.1| bacterial extracellular solute-binding protein, family 3 family protein 6 [Achromobacter xylosoxidans A8] Length = 273 Score = 179 bits (454), Expect = 6e-43, Method: Composition-based stats. Identities = 55/276 (19%), Positives = 101/276 (36%), Gaps = 13/276 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59 M + + + A + DIK RG L CG F+ G+ Sbjct: 1 MKRHTLFAACLGLATLALGAVAQADQVDDIKARGELICGTLGTSQPFSFQDGTTRQLVGY 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD C+ ++ + KI Y L+ R L ++DIL+ N ++ R +G + Sbjct: 61 DVDVCKLVADKLG---VKISYKLLSVAARVPELNEGRVDILAANLGYSPDRAQQIGFSHA 117 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y Q ++ K G+ +V L+G I G+++E + K I + Sbjct: 118 --YYVSPQKLLVRKDSGLETVEALNGRRIGATKGSSSEREIKRIL----DKSQVIGYGDS 171 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 A + + DA L L L + + ++ + P + + + + Sbjct: 172 SATYLALQQKKVDAQFASELVLVRLVLQSPPTAPVSVIAKSVFDEPWGLGVRKSEPRFLE 231 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 V+ A+ AE G+ K ++ T ++R Sbjct: 232 TVN---QALDEAEASGVAAKLFDKWFGPETPYKLER 264 >gi|121593035|ref|YP_984931.1| extracellular solute-binding protein [Acidovorax sp. JS42] gi|120605115|gb|ABM40855.1| amino acid ABC transporter substrate-binding protein, PAAT family [Acidovorax sp. JS42] Length = 296 Score = 179 bits (454), Expect = 6e-43, Method: Composition-based stats. Identities = 43/271 (15%), Positives = 91/271 (33%), Gaps = 8/271 (2%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K + ++ + L + +L ++ G L V F+ V G G+ +D Sbjct: 4 KQGWKALGAAVALCCAVGAQAQGVLERVRGGGPLVLAHRESSVPFSYVHE-GKPMGYALD 62 Query: 63 FCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 C ++ + +Q + + R +++ + D+ +T R + Sbjct: 63 LCLHIAEVVRKKTGMKNMPVQLVQVTPANRIEMVKTGKADMECGSTTNNAERRKDVAFTI 122 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + G ++ ++ + L G + GTT + M+ + Sbjct: 123 --PHFITGARLLVPAASSVTRMEDLEGKKLVSTKGTTPYKAAEQANRERLMRIQLVEAPD 180 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E + DA+ D LY L P ++ ++ PLA + + D E+ Sbjct: 181 HEAAVVMVEKGQADAFVMDDVLLYGLAANRPDPKALKVVGRFVTTEPLAIMLAKNDPEFK 240 Query: 239 NIVSWTHYAMVTAEELG-ITQKNINQVSKDT 268 +V ++ + E+ I K Q T Sbjct: 241 KLVDEEMRRLIVSNEINAIYDKWFMQPIAPT 271 >gi|226361323|ref|YP_002779101.1| ABC transporter substrate-binding protein [Rhodococcus opacus B4] gi|226239808|dbj|BAH50156.1| putative ABC transporter substrate-binding protein [Rhodococcus opacus B4] Length = 324 Score = 179 bits (454), Expect = 6e-43, Method: Composition-based stats. Identities = 53/222 (23%), Positives = 91/222 (40%), Gaps = 10/222 (4%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + I+ RG L G++TG + A G +GFDVD R +S +F DP ++ Y L Sbjct: 79 PTVDAIRARGRLVVGLDTGSNLMSFRDPATGAIEGFDVDVAREISRDLFGDPDRLDYRIL 138 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 + R ALQ +DI+++ T R+ + + + Q ++ K I S + L Sbjct: 139 TSANREKALQESMVDIVAKTMTITCDRKERVAFSSE--YFEAQQRVLVVKGSPIRSAADL 196 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 G +CV GTT+ L + P+ + + + DA + D + L Sbjct: 197 DGKRVCVVRGTTSLTRLQQVAPTAEILTVPM----WSDCLVVLQQRQVDAVSTDDTILAG 252 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 L + I+ D + P I + + + V+ T Sbjct: 253 LASQDP---YLEIVGDSMGAEPYGVGITKANEDLVRFVNGTL 291 >gi|15599390|ref|NP_252884.1| binding protein component of ABC transporter [Pseudomonas aeruginosa PAO1] gi|9950406|gb|AAG07582.1|AE004836_1 probable binding protein component of ABC transporter [Pseudomonas aeruginosa PAO1] Length = 276 Score = 179 bits (454), Expect = 6e-43, Method: Composition-based stats. Identities = 58/286 (20%), Positives = 106/286 (37%), Gaps = 16/286 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59 M + L + S + +A L DI+K+G + G + + G+ Sbjct: 1 MKIRLLGAALAAVFTLIGS-AAHADDLADIRKKGEIVIGTLGTDEPNSFIDPKTRQIIGY 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 +VD ++ AI P + ++ R LQ +D+L+ + RE + ++ Sbjct: 60 EVDLGTEIAKAIGVKPV---FKQISVAARIPELQQGHVDLLAASLTHNKEREALVDFSYS 116 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I GQ ++ K G +S+ L G + G T E + + FE Sbjct: 117 II--VTGQKALVKKNAGFASLHDLDGKKVLTVKGGTQEPNIRKALPNAQ----VVTFETS 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYA-LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 ++ A + + A+ D SAL + ILP+ +S LA A +G+ + Sbjct: 171 QQALLALQQGKGQAFVDDESALVNDFGKLGAAAGGYAILPENLSTEALAIAFRKGNPQLK 230 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV-QRFLGIDKSS 283 +V T E G ++ + T ++ +R ID Sbjct: 231 QLVDSTLAG---LERSGAAEQLYLKWYGPGTKSNLSERHFKIDSDR 273 >gi|323697579|ref|ZP_08109491.1| extracellular solute-binding protein family 3 [Desulfovibrio sp. ND132] gi|323457511|gb|EGB13376.1| extracellular solute-binding protein family 3 [Desulfovibrio desulfuricans ND132] Length = 274 Score = 179 bits (454), Expect = 7e-43, Method: Composition-based stats. Identities = 50/253 (19%), Positives = 99/253 (39%), Gaps = 15/253 (5%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 + LK G++ + F + +W GFDVD ++ + K+ Sbjct: 22 AGPTYDRVMSTKTLKVGLSNQGIPFGFIDDKNEWVGFDVDMATEIAKRLGCKLEKV---V 78 Query: 83 LNAKERFLALQSK--QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +N R +Q+ ++D++ N +R+ + + +FDGQ F+ K + V Sbjct: 79 VNNNTRISFVQTNPPKVDMVLSNMTHKRVRDEKIDFSI--TYFFDGQKFLAKKGT-VKDV 135 Query: 141 SQLSGASICVQAGTTTELTLADYFKA-HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L+ + GTT+ + Y K N ++ + A R+ R A T D + Sbjct: 136 KDLANMKVGSMQGTTSIVNATAYLKELGNPNPSVTGYDGEVAMFEALRSGRVQAITTDST 195 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L P + ++ D IS P + Q D+ W + +++T + + G ++ Sbjct: 196 ILLGYAA--KVPGQFELVGDFISDEPYGIGLPQDDSAWRDTINFTLQDIW---KDGTYKQ 250 Query: 260 NINQVSK-DTTNP 271 ++ D+ P Sbjct: 251 IYDKWFGPDSQYP 263 >gi|308369386|ref|ZP_07666727.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu002] gi|308370400|ref|ZP_07666925.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu003] gi|308372885|ref|ZP_07667473.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu005] gi|308375151|ref|ZP_07442886.2| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu007] gi|308327701|gb|EFP16552.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu002] gi|308332063|gb|EFP20914.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu003] gi|308339455|gb|EFP28306.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu005] gi|308347232|gb|EFP36083.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu007] Length = 308 Score = 179 bits (454), Expect = 7e-43, Method: Composition-based stats. Identities = 63/258 (24%), Positives = 105/258 (40%), Gaps = 12/258 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDD 74 F T +A++ DI+ RG L G++ G F+ G+ GFDVD ++ IF Sbjct: 55 FATKAEADAAV-ADIRARGRLIVGLDIGSNLFSFRDPITGEITGFDVDIAGEVARDIFGV 113 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 PS ++Y L+A ER ALQ Q+DI+ + T R + + Q + + Sbjct: 114 PSHVEYRILSAAERVTALQKSQVDIVVKTMSITCERRKLVNF--STVYLDANQRILAPRD 171 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I+ VS LSG +CV GTT+ + + + + A + DA Sbjct: 172 SPITKVSDLSGKRVCVARGTTSLRRIREIAP----PPVIVSVVNWADCLVALQQREIDAV 227 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 + D + L L + P H++ PD ++ P I +T V+ T + Sbjct: 228 STDDTILAGL--VEEDPYLHIVGPD-MADQPYGVGINLDNTGLVRFVNGTLERIRNDGTW 284 Query: 255 G-ITQKNINQVSKDTTNP 271 + +K + + P Sbjct: 285 NTLYRKWLTVLGPAPAPP 302 >gi|15607552|ref|NP_214925.1| glutamine-binding lipoprotein [Mycobacterium tuberculosis H37Rv] gi|15839797|ref|NP_334834.1| amino acid ABC transporter, amino acid-binding protein [Mycobacterium tuberculosis CDC1551] gi|31791589|ref|NP_854082.1| glutamine-binding lipoprotein [Mycobacterium bovis AF2122/97] gi|121636325|ref|YP_976548.1| putative glutamine-binding lipoprotein glnH [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148660176|ref|YP_001281699.1| amino acid ABC transporter substrate-binding protein [Mycobacterium tuberculosis H37Ra] gi|148821607|ref|YP_001286361.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis F11] gi|167970774|ref|ZP_02553051.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis H37Ra] gi|215409923|ref|ZP_03418731.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis 94_M4241A] gi|215429231|ref|ZP_03427150.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis EAS054] gi|215444497|ref|ZP_03431249.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis T85] gi|218752041|ref|ZP_03530837.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis GM 1503] gi|219556230|ref|ZP_03535306.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis T17] gi|224988797|ref|YP_002643484.1| putative glutamine-binding lipoprotein [Mycobacterium bovis BCG str. Tokyo 172] gi|253797334|ref|YP_003030335.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis KZN 1435] gi|254363375|ref|ZP_04979421.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis str. Haarlem] gi|254549356|ref|ZP_05139803.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260185276|ref|ZP_05762750.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis CPHL_A] gi|260199407|ref|ZP_05766898.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis T46] gi|260203559|ref|ZP_05771050.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis K85] gi|289441790|ref|ZP_06431534.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis T46] gi|289445950|ref|ZP_06435694.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis CPHL_A] gi|289552660|ref|ZP_06441870.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis KZN 605] gi|289568326|ref|ZP_06448553.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis T17] gi|289572996|ref|ZP_06453223.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis K85] gi|289752440|ref|ZP_06511818.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis EAS054] gi|289756480|ref|ZP_06515858.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis T85] gi|289760527|ref|ZP_06519905.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis GM 1503] gi|294995916|ref|ZP_06801607.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis 210] gi|297632893|ref|ZP_06950673.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis KZN 4207] gi|297729868|ref|ZP_06958986.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis KZN R506] gi|298523887|ref|ZP_07011296.1| amino acid ABC transporter, amino acid-binding protein [Mycobacterium tuberculosis 94_M4241A] gi|306774505|ref|ZP_07412842.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu001] gi|306787410|ref|ZP_07425732.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu004] gi|306796149|ref|ZP_07434451.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu006] gi|306966414|ref|ZP_07479075.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu009] gi|306970609|ref|ZP_07483270.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu010] gi|307078335|ref|ZP_07487505.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu011] gi|307082893|ref|ZP_07492006.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu012] gi|313657197|ref|ZP_07814077.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis KZN V2475] gi|1817677|emb|CAB06581.1| PROBABLE GLUTAMINE-BINDING LIPOPROTEIN GLNH (GLNBP) [Mycobacterium tuberculosis H37Rv] gi|13879927|gb|AAK44648.1| amino acid ABC transporter, amino acid-binding protein [Mycobacterium tuberculosis CDC1551] gi|31617175|emb|CAD93282.1| PROBABLE GLUTAMINE-BINDING LIPOPROTEIN GLNH (GLNBP) [Mycobacterium bovis AF2122/97] gi|121491972|emb|CAL70435.1| Probable glutamine-binding lipoprotein glnH [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|134148889|gb|EBA40934.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis str. Haarlem] gi|148504328|gb|ABQ72137.1| amino acid ABC transporter substrate-binding protein [Mycobacterium tuberculosis H37Ra] gi|148720134|gb|ABR04759.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis F11] gi|224771910|dbj|BAH24716.1| putative glutamine-binding lipoprotein [Mycobacterium bovis BCG str. Tokyo 172] gi|253318837|gb|ACT23440.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis KZN 1435] gi|289414709|gb|EFD11949.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis T46] gi|289418908|gb|EFD16109.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis CPHL_A] gi|289437292|gb|EFD19785.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis KZN 605] gi|289537427|gb|EFD42005.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis K85] gi|289542079|gb|EFD45728.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis T17] gi|289693027|gb|EFD60456.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis EAS054] gi|289708033|gb|EFD72049.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis GM 1503] gi|289712044|gb|EFD76056.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis T85] gi|298493681|gb|EFI28975.1| amino acid ABC transporter, amino acid-binding protein [Mycobacterium tuberculosis 94_M4241A] gi|308216857|gb|EFO76256.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu001] gi|308335878|gb|EFP24729.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu004] gi|308343320|gb|EFP32171.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu006] gi|308355813|gb|EFP44664.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu009] gi|308359733|gb|EFP48584.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu010] gi|308363675|gb|EFP52526.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu011] gi|308367326|gb|EFP56177.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu012] gi|326902236|gb|EGE49169.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis W-148] gi|328457121|gb|AEB02544.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis KZN 4207] Length = 328 Score = 179 bits (454), Expect = 7e-43, Method: Composition-based stats. Identities = 63/258 (24%), Positives = 105/258 (40%), Gaps = 12/258 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDD 74 F T +A++ DI+ RG L G++ G F+ G+ GFDVD ++ IF Sbjct: 75 FATKAEADAAV-ADIRARGRLIVGLDIGSNLFSFRDPITGEITGFDVDIAGEVARDIFGV 133 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 PS ++Y L+A ER ALQ Q+DI+ + T R + + Q + + Sbjct: 134 PSHVEYRILSAAERVTALQKSQVDIVVKTMSITCERRKLVNF--STVYLDANQRILAPRD 191 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I+ VS LSG +CV GTT+ + + + + A + DA Sbjct: 192 SPITKVSDLSGKRVCVARGTTSLRRIREIAP----PPVIVSVVNWADCLVALQQREIDAV 247 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 + D + L L + P H++ PD ++ P I +T V+ T + Sbjct: 248 STDDTILAGL--VEEDPYLHIVGPD-MADQPYGVGINLDNTGLVRFVNGTLERIRNDGTW 304 Query: 255 G-ITQKNINQVSKDTTNP 271 + +K + + P Sbjct: 305 NTLYRKWLTVLGPAPAPP 322 >gi|323721082|gb|EGB30144.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis CDC1551A] Length = 329 Score = 179 bits (454), Expect = 7e-43, Method: Composition-based stats. Identities = 63/258 (24%), Positives = 105/258 (40%), Gaps = 12/258 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDD 74 F T +A++ DI+ RG L G++ G F+ G+ GFDVD ++ IF Sbjct: 76 FATKAEADAAV-ADIRARGRLIVGLDIGSNLFSFRDPITGEITGFDVDIAGEVARDIFGV 134 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 PS ++Y L+A ER ALQ Q+DI+ + T R + + Q + + Sbjct: 135 PSHVEYRILSAAERVTALQKSQVDIVVKTMSITCERRKLVNF--STVYLDANQRILAPRD 192 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I+ VS LSG +CV GTT+ + + + + A + DA Sbjct: 193 SPITKVSDLSGKRVCVARGTTSLRRIREIAP----PPVIVSVVNWADCLVALQQREIDAV 248 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 + D + L L + P H++ PD ++ P I +T V+ T + Sbjct: 249 STDDTILAGL--VEEDPYLHIVGPD-MADQPYGVGINLDNTGLVRFVNGTLERIRNDGTW 305 Query: 255 G-ITQKNINQVSKDTTNP 271 + +K + + P Sbjct: 306 NTLYRKWLTVLGPAPAPP 323 >gi|289744107|ref|ZP_06503485.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis 02_1987] gi|289684635|gb|EFD52123.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis 02_1987] Length = 337 Score = 179 bits (454), Expect = 7e-43, Method: Composition-based stats. Identities = 63/258 (24%), Positives = 105/258 (40%), Gaps = 12/258 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDD 74 F T +A++ DI+ RG L G++ G F+ G+ GFDVD ++ IF Sbjct: 84 FATKAEADAAV-ADIRARGRLIVGLDIGSNLFSFRDPITGEITGFDVDIAGEVARDIFGV 142 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 PS ++Y L+A ER ALQ Q+DI+ + T R + + Q + + Sbjct: 143 PSHVEYRILSAAERVTALQKSQVDIVVKTMSITCERRKLVNF--STVYLDANQRILAPRD 200 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I+ VS LSG +CV GTT+ + + + + A + DA Sbjct: 201 SPITKVSDLSGKRVCVARGTTSLRRIREIAP----PPVIVSVVNWADCLVALQQREIDAV 256 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 + D + L L + P H++ PD ++ P I +T V+ T + Sbjct: 257 STDDTILAGL--VEEDPYLHIVGPD-MADQPYGVGINLDNTGLVRFVNGTLERIRNDGTW 313 Query: 255 G-ITQKNINQVSKDTTNP 271 + +K + + P Sbjct: 314 NTLYRKWLTVLGPAPAPP 331 >gi|302523732|ref|ZP_07276074.1| amino acid ABC transporter ATP-binding protein [Streptomyces sp. AA4] gi|302432627|gb|EFL04443.1| amino acid ABC transporter ATP-binding protein [Streptomyces sp. AA4] Length = 321 Score = 179 bits (454), Expect = 7e-43, Method: Composition-based stats. Identities = 48/263 (18%), Positives = 94/263 (35%), Gaps = 11/263 (4%) Query: 12 LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSA 70 L L T+ L IK+RG L G++ F G +GFD+D ++ Sbjct: 64 LASLAPNGLDTSGPSLQKIKQRGKLIAGVDQTTYLFGFRNPKTGKLEGFDIDLVNEIARQ 123 Query: 71 IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130 IF +QY + + +R L+ Q+D++ R T R + + Y GQ + Sbjct: 124 IFGSDGHVQYRAITSSQRETVLKEHQVDVVVRTYSITCARRKQVQF--SSVYYVAGQKIL 181 Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190 + K S++ L+G +C A +T+ +A K + + + + Sbjct: 182 VPKSSNAQSLTDLAGKRVCAAAKSTSLAKIA----TDPAKPVAVSVPNWSDCLVMLQQGQ 237 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 DA + D + L + + + D +++ I + + + V+ + Sbjct: 238 VDAVSTDDTILAGMAAQDPT---VKVAGDPMTQENYGVGIPKDEEDLVRFVNAVLDKIRG 294 Query: 251 AEEL-GITQKNINQVSKDTTNPD 272 Q + + P Sbjct: 295 DGTWANSYQNWVGARLGPASPPS 317 >gi|215402161|ref|ZP_03414342.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis 02_1987] Length = 329 Score = 179 bits (454), Expect = 7e-43, Method: Composition-based stats. Identities = 63/258 (24%), Positives = 105/258 (40%), Gaps = 12/258 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDD 74 F T +A++ DI+ RG L G++ G F+ G+ GFDVD ++ IF Sbjct: 76 FATKAEADAAV-ADIRARGRLIVGLDIGSNLFSFRDPITGEITGFDVDIAGEVARDIFGV 134 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 PS ++Y L+A ER ALQ Q+DI+ + T R + + Q + + Sbjct: 135 PSHVEYRILSAAERVTALQKSQVDIVVKTMSITCERRKLVNF--STVYLDANQRILAPRD 192 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I+ VS LSG +CV GTT+ + + + + A + DA Sbjct: 193 SPITKVSDLSGKRVCVARGTTSLRRIREIAP----PPVIVSVVNWADCLVALQQREIDAV 248 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 + D + L L + P H++ PD ++ P I +T V+ T + Sbjct: 249 STDDTILAGL--VEEDPYLHIVGPD-MADQPYGVGINLDNTGLVRFVNGTLERIRNDGTW 305 Query: 255 G-ITQKNINQVSKDTTNP 271 + +K + + P Sbjct: 306 NTLYRKWLTVLGPAPAPP 323 >gi|152965465|ref|YP_001361249.1| extracellular solute-binding protein family 3 [Kineococcus radiotolerans SRS30216] gi|151359982|gb|ABS02985.1| extracellular solute-binding protein family 3 [Kineococcus radiotolerans SRS30216] Length = 305 Score = 179 bits (454), Expect = 7e-43, Method: Composition-based stats. Identities = 50/254 (19%), Positives = 102/254 (40%), Gaps = 14/254 (5%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQY 80 T + IK G + G+ G + A +G++ GFD++ + +++ + P +I + Sbjct: 56 TGSPTYDKIKAAGKVVIGVKADQPGIGQKDAGSGEYTGFDIEMAKLMAANLGLTPDEIDF 115 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISS 139 + + R LQ +D++ + R+ + A Y GQ ++ + I+ Sbjct: 116 VETVSANREPFLQQGTVDMVIASYTINDKRKQVVDFA--GPYYVAGQDLLVRADEEEITG 173 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L+G +C G+T + D + + F+ + ++ DA T D + Sbjct: 174 PDALAGKKVCSVEGSTPATRIRD----EHPDAQLVTFDAYSKCVEQLTSNAVDAVTTDDA 229 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L P ++ S+ P + +GDT N ++ A+ TA E G +K Sbjct: 230 ILRGYAAQQ--PEALKVVGAPFSEEPYGIGLPKGDTALRNALND---AIETAVEDGDWKK 284 Query: 260 NINQVSKDT-TNPD 272 + + T+P+ Sbjct: 285 AYDHTLGGSGTDPE 298 >gi|110347317|ref|YP_666134.1| extracellular solute-binding protein [Mesorhizobium sp. BNC1] gi|110287493|gb|ABG65551.1| amino acid ABC transporter substrate-binding protein, PAAT family [Chelativorans sp. BNC1] Length = 289 Score = 179 bits (454), Expect = 7e-43, Method: Composition-based stats. Identities = 62/279 (22%), Positives = 113/279 (40%), Gaps = 16/279 (5%) Query: 1 MY-KDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWK 57 M K + ++L + + A L DIK RG L CG+ F N Sbjct: 12 MKGKSLYAALLVAATPGMWGLSAAEAGTLDDIKARGELICGVLGNSEPFGYEDPGNRQVV 71 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G+++D C+ L+ + P+ + + R LQ ++D+L+ +T R + + Sbjct: 72 GYEIDLCKDLAGTMDVTPT---IKVIAPQARIPELQQGRVDLLAALISYTNER--AEQVD 126 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F D ++ K GI+ + L+ I VQ G E L F + ++ Sbjct: 127 FSNTYLVDSFRCMVKKDSGITGLDGLADKRISVQKGGLIEAALRSQFPNA----TVLSYD 182 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA-PAIIQGDTE 236 V E A++ + A + L AL++ + ILP+ ++ A A+ +GD Sbjct: 183 DVSERFVAFQQGKAAATCDRATLLRALQIRAKNEATTTILPEALNMMQKAGFAVRKGD-- 240 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 + V + + + T E G Q ++ ++N D+ R Sbjct: 241 -KDFVDYLNQFLATYESSGKGQALFDRWVGASSNYDLSR 278 >gi|220929057|ref|YP_002505966.1| extracellular solute-binding protein family 3 [Clostridium cellulolyticum H10] gi|219999385|gb|ACL75986.1| extracellular solute-binding protein family 3 [Clostridium cellulolyticum H10] Length = 290 Score = 179 bits (454), Expect = 7e-43, Method: Composition-based stats. Identities = 52/278 (18%), Positives = 105/278 (37%), Gaps = 14/278 (5%) Query: 1 MYKD---FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K F ++ ++L SIL + +RG + G + + NG+W Sbjct: 1 MKKSIVCFIFLVIISVLLTACGTEKQESILDKVLERGVVNIGSGNNVPPMNYIDENGNWT 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD++ A++ + K++ + +N K R L + +D++ N T R+ + Sbjct: 61 GFDIELSDAIAERLG---VKLERVVVNNKTRISFLANGTVDMVVSNLSHTRSRDEQIDYV 117 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA-HNMKYHPIVF 176 P Y KK +++ L+G I V G+ + + + + K F Sbjct: 118 EPP--YLWTGKIAYAKKGKFKNLTDLAGKKIAVDQGSNAYIAIQQEIEKVNGAKPDIQTF 175 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + E A + + DA+T D + + E+ + I S + D++ Sbjct: 176 QSNAECFLALKQGKVDAFTQDSVIIAG--VAGKEGVEYEPIGGIYSPGLYGIGVPPNDSK 233 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 W + +S+ ++ G K ++ +Q Sbjct: 234 WKDKISFILQDLMR---DGTYDKIYDKWFGTNGKFPLQ 268 >gi|118618243|ref|YP_906575.1| glutamine-binding lipoprotein GlnH [Mycobacterium ulcerans Agy99] gi|183980737|ref|YP_001849028.1| glutamine-binding lipoprotein GlnH [Mycobacterium marinum M] gi|118570353|gb|ABL05104.1| glutamine-binding lipoprotein GlnH [Mycobacterium ulcerans Agy99] gi|183174063|gb|ACC39173.1| glutamine-binding lipoprotein GlnH [Mycobacterium marinum M] Length = 328 Score = 178 bits (453), Expect = 7e-43, Method: Composition-based stats. Identities = 59/238 (24%), Positives = 99/238 (41%), Gaps = 11/238 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDD 74 F T +A++ DI+ RG L G++ G F+ G+ GFDVD ++ IF Sbjct: 75 FPTKAEADAAV-ADIRARGRLIVGLDIGSNLFSFRDPITGEITGFDVDIASEVARDIFGG 133 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 P+ ++Y L+A ER ALQS Q+D++ + T R + + Q + + Sbjct: 134 PTHVEYRILSAAERITALQSSQVDVVVKTMTITCERRKLVNF--STVYLDANQRILTSRD 191 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I VS LSG +CV GTT+ + + + + A + DA Sbjct: 192 SPIFKVSDLSGKRVCVARGTTSLRRIREIAP----PPVIVSVVNWADCLVALQQREIDAV 247 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 + D + L L + P H++ P+ ++ P I +T V+ T + Sbjct: 248 STDDTILAGL--VEEDPYLHIVGPN-MANQPYGIGINLDNTGLVRFVNGTLERIRNDG 302 >gi|325125286|gb|ADY84616.1| Glutamine ABC transporter solute-binding component [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 270 Score = 178 bits (453), Expect = 7e-43, Method: Composition-based stats. Identities = 50/272 (18%), Positives = 108/272 (39%), Gaps = 15/272 (5%) Query: 7 VSILCLIILFFT-SFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFC 64 +++L L ++F S S ++S +K+ + G+ F+ + +G GF+VD Sbjct: 1 MAVLLLSLVFTACSHSQSSSTYDRVKQTNTITWGMRADTRLFSMMDVDSGKATGFEVDLA 60 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 RA++ I K++ ++ K R + L+ +D + T R + + Sbjct: 61 RAITKQILGPKGKMKIEYISEKSRIMDLKIGNVDAVMATMTNTPDRRKIINF--SDTYFM 118 Query: 125 DGQGFIMHKKKGISSVSQLSGAS--ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 G+ I+ KK ++S+ + + I G+T + + Y K I ++ Sbjct: 119 AGETLIVPKKSKLNSIKDFNNSKYSIAAVKGSTADSDVHKYAP----KDRVIFYDDYGSC 174 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A +A + +A D + L L +D + +LPD + P I +G+ ++ V+ Sbjct: 175 YNALKAGKANAMVSDNAVLAGLI--SDDKDKFKMLPDTFTVEPYGIGIKKGEDKFTAEVN 232 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 + G + + +++ Sbjct: 233 QALK---VLRKNGTYACLMKKWFNGVPGFNIK 261 >gi|296130894|ref|YP_003638144.1| extracellular solute-binding protein family 3 [Cellulomonas flavigena DSM 20109] gi|296022709|gb|ADG75945.1| extracellular solute-binding protein family 3 [Cellulomonas flavigena DSM 20109] Length = 318 Score = 178 bits (453), Expect = 7e-43, Method: Composition-based stats. Identities = 52/252 (20%), Positives = 95/252 (37%), Gaps = 13/252 (5%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 S + +I+ RG L G++ + G +GFD+D R ++ AI DP I++ Sbjct: 72 GSTMDEIRARGNLVVGVSADTLRMGARNPFTGQIEGFDIDVARQVAQAILGDPDAIRFRV 131 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + A +R L++ ++D+++R R + + + GQ ++ + S+ Sbjct: 132 ITAGDRIPVLENHEVDLVTRAFTMNCERWDQIAFSAE--YFTAGQKVLVSTESQAQSIED 189 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G +C GTTT L +Y + A ++ R DA TGD + L Sbjct: 190 LDGQRVCAPEGTTTLERLDEY------DVEAVGARTHSACLALFQQGRVDAITGDDTVLA 243 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT-QKNI 261 + ++ D S P I + V+ M T ++ + Sbjct: 244 GFVAQDP---YAKVVGDAFSAEPYGVGIAADRVDLVRFVNAVLDGMKADGTWAATYERWL 300 Query: 262 NQVSKDTTNPDV 273 + P V Sbjct: 301 GEALGPAPAPPV 312 >gi|149189496|ref|ZP_01867780.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio shilonii AK1] gi|148836653|gb|EDL53606.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio shilonii AK1] Length = 264 Score = 178 bits (453), Expect = 8e-43, Method: Composition-based stats. Identities = 62/271 (22%), Positives = 105/271 (38%), Gaps = 14/271 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M V+ + L +S S A L DI++RG++K G++ G + G+D Sbjct: 1 MKFKALVATILASALAISSTSAFAGKLEDIRERGYIKIGVSLGGEPIGFRDQKNNPAGYD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + L+ + + ++ ++ R L S Q+D + N TL R S+ + Sbjct: 61 VDLAKRLAEKLGVEA---RFTDVHGDARVSMLFSDQLDAVIGNMSATLERAKSVNFSI-- 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 G + K + I+S+ L+G + V G+T E L + Y Sbjct: 116 PYARAGLRIVHQKDQDINSLQDLAGKRVVVGRGSTGEAFLKREVPEAELVYTDNF---AP 172 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + R R DA D S + L N V LP + S P+A + +GD E+ Sbjct: 173 DGVLLLRQGRVDAGIEDSSLIDYLATNNPN---LVTLPGLHSNDPIAIGVRKGDAEYL-- 227 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 W + G + + ++ NP Sbjct: 228 -RWMDMFVSDYINSGAYEASYHKWWGADANP 257 >gi|104773644|ref|YP_618624.1| glutamine ABC transporter, glutamine-binding protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103422725|emb|CAI97352.1| Glutamine ABC transporter, glutamine-binding protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 281 Score = 178 bits (453), Expect = 8e-43, Method: Composition-based stats. Identities = 49/283 (17%), Positives = 107/283 (37%), Gaps = 20/283 (7%) Query: 1 MYKDF-----FVSILCLIILFFT-SFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-AN 53 M + +++L L ++F S S ++S +K+ + G+ F+ + + Sbjct: 1 MARKLRELTAIMAVLLLSLVFTACSHSQSSSTYDRVKQTNTITWGMRADTRLFSMMDVDS 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G GF+VD RA++ I K++ ++ K R + L+ +D + T R Sbjct: 61 GKATGFEVDLARAITKQILGPKGKMKIEYISEKSRIMDLKIGNVDAVMATMTNTPDRRKI 120 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS--ICVQAGTTTELTLADYFKAHNMKY 171 + + G+ I+ KK ++S+ + + I G+T + + Y Sbjct: 121 INF--SDTYFMAGETLIVPKKSKLNSIKDFNNSKYSIAAVKGSTADSDVHKYAPKA---- 174 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 I ++ A + + A D + L L +D + +LPD + P I Sbjct: 175 RVIFYDDYGSCYNALKTGKASAMVSDNAVLAGLI--SDDKDKFKMLPDTFTVEPYGIGIK 232 Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 +G+ ++ V+ + G + + +++ Sbjct: 233 RGEDKFTAEVNQALK---VLRKNGTYACLMKKWFNGVPGFNIK 272 >gi|210611518|ref|ZP_03288938.1| hypothetical protein CLONEX_01128 [Clostridium nexile DSM 1787] gi|319936515|ref|ZP_08010930.1| extracellular solute-binding protein family 3 [Coprobacillus sp. 29_1] gi|210151965|gb|EEA82972.1| hypothetical protein CLONEX_01128 [Clostridium nexile DSM 1787] gi|319808407|gb|EFW04962.1| extracellular solute-binding protein family 3 [Coprobacillus sp. 29_1] Length = 290 Score = 178 bits (453), Expect = 8e-43, Method: Composition-based stats. Identities = 55/258 (21%), Positives = 105/258 (40%), Gaps = 15/258 (5%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 + +IKK G + G+ + F V NG+++G+D+ F L + KI Y+ A Sbjct: 42 TVDEIKKSGTINIGVFSDKAPFGYVDENGEYQGYDIYFAERLGKDLG---VKINYVSTEA 98 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-S 144 R LQ+ ++D++ N T R + A G + HK+ I+ +SQ+ + Sbjct: 99 ANRIEYLQTGKVDVILANFTVTDERAEEVDFAL--PYMNVSLGVVSHKEHVITDLSQVGA 156 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 + V +GTT E Y + F+ +A+ A+ D + + A Sbjct: 157 DEQVIVISGTTAET----YLTKNYPDIKLQKFDTYAAAKSAFENGTGVAWANDNTEVIAF 212 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 N+ + + + S +APA+ +G+T + W + + T + K+ + Sbjct: 213 AKENE--GYTIGIDSLGSSDTIAPAVTKGNTSLLD---WLNEEIETLGKEKFFHKDYEET 267 Query: 265 SKDTTNPDVQRFLGIDKS 282 D D + L ++ Sbjct: 268 LADAYGLDYEDTLVVESG 285 >gi|254382236|ref|ZP_04997597.1| glutamate binding periplasmic protein [Streptomyces sp. Mg1] gi|194341142|gb|EDX22108.1| glutamate binding periplasmic protein [Streptomyces sp. Mg1] Length = 301 Score = 178 bits (453), Expect = 8e-43, Method: Composition-based stats. Identities = 56/259 (21%), Positives = 96/259 (37%), Gaps = 14/259 (5%) Query: 16 FFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFD 73 T FS S K+RG L G+ E A+G + GFD++ + +S+++ Sbjct: 41 VATGFSLPGSPTWERAKRRGHLVVGVKEDQPYMGEKDPASGRYSGFDIEIAKMMSASLGF 100 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 DP I++ + + R ALQ+ QID R+ +G A + GQ ++ K Sbjct: 101 DPKTIEFKTIASANRETALQNGQIDYYVGTYTINDNRKKQVGFA--GPYFMAGQSLLVRK 158 Query: 134 K-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 K I L+G +C AG+T L + + ++ ++ D Sbjct: 159 DEKDIKGPEDLAGKKVCSAAGSTPYQRLQKEYPEA----VLVAYDTYSACVDNLLTYQVD 214 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 A + D S L P E ++ S+ P + + D + A E Sbjct: 215 AVSTDDSILLGYAA--KVPDELKVVGKPFSEEPYGIGVPRSDNALRLALDDALEAN---E 269 Query: 253 ELGITQKNINQVSKDTTNP 271 + G +K + P Sbjct: 270 KNGNWKKAYEATLGLSGQP 288 >gi|291557062|emb|CBL34179.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [Eubacterium siraeum V10Sc8a] Length = 294 Score = 178 bits (453), Expect = 9e-43, Method: Composition-based stats. Identities = 60/304 (19%), Positives = 111/304 (36%), Gaps = 35/304 (11%) Query: 1 MYKDFFVSILCLIIL------FFTSFSTNAS--------------ILGDIKKRGFLKCGI 40 M K F ++ L + FT+ TNA+ L +IK G + G+ Sbjct: 1 MKKLNFKKLIALGLTAAAAVASFTACGTNATSGGSDGNTGSKVYRTLDEIKASGKINIGV 60 Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 + F V NG+++G+D+ F L + + I Y+ A R L++ ++DI+ Sbjct: 61 FSDKNPFGYVDENGEYQGYDIYFANRLGKDLGVE---INYVSTEAANRVEYLETGKVDII 117 Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTELT 159 N T R + A G + I+S+ + V +GTT EL Sbjct: 118 LANFTVTEERAEKVDFAL--PYMNVALGVVSPDSNVITSLDNWKAEDRMIVISGTTAEL- 174 Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219 Y + ++ +A A+ D + + A N V + Sbjct: 175 ---YLTKNYPDIKLQKYDSYATAKSAIENGNGVAWANDNTEVIAFAKQNK--GYTVGIDS 229 Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGI 279 + S+ +APA+ +G+ +W + + T + + + DT D + L + Sbjct: 230 LGSQDTIAPAVTKGNETLL---NWINDEIKTLGKENFFHADYDATLTDTYGADYKETLVV 286 Query: 280 DKSS 283 + Sbjct: 287 EGGE 290 >gi|116513636|ref|YP_812542.1| amino acid ABC transporter periplasmic protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116092951|gb|ABJ58104.1| amino acid ABC transporter substrate-binding protein, PAAT family [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 270 Score = 178 bits (453), Expect = 9e-43, Method: Composition-based stats. Identities = 49/272 (18%), Positives = 107/272 (39%), Gaps = 15/272 (5%) Query: 7 VSILCLIILFFT-SFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFC 64 +++L L ++F S S ++S +K+ + G+ F+ + +G GF+VD Sbjct: 1 MAVLLLSLVFTACSHSQSSSTYDRVKQTNTITWGMRADTRLFSMMDVDSGKATGFEVDLA 60 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 RA++ I K++ ++ K R + L+ +D + T R + + Sbjct: 61 RAITKQILGPKGKMKIGYISEKSRIMDLKIGNVDAVMATMTNTPDRRKIINF--SDTYFM 118 Query: 125 DGQGFIMHKKKGISSVSQLSGAS--ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 G+ I+ KK ++S+ + + I G+T + + Y I ++ Sbjct: 119 AGETLIVPKKSKLNSIKDFNNSKYSIAAVKGSTADSDVHKYAPKA----RVIFYDDYGSC 174 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A +A + +A D + L L +D + +LPD + P I +G+ ++ V+ Sbjct: 175 YNALKAGKANAMVSDNAVLAGLI--SDDKDKFKMLPDTFTVEPYGIGIKKGEDKFTAEVN 232 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 + G + + +++ Sbjct: 233 QALK---VLRKNGTYACLMKKWFNGVPGFNIK 261 >gi|183597011|ref|ZP_02958504.1| hypothetical protein PROSTU_00243 [Providencia stuartii ATCC 25827] gi|188023667|gb|EDU61707.1| hypothetical protein PROSTU_00243 [Providencia stuartii ATCC 25827] Length = 276 Score = 178 bits (453), Expect = 9e-43, Method: Composition-based stats. Identities = 57/257 (22%), Positives = 99/257 (38%), Gaps = 16/257 (6%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQY 80 NA L DIK+ G ++ + F + G+DVD +A++ + K++ Sbjct: 21 ANADKLDDIKQAGVIRISVFDSNPPFGFIDPQTKKLAGYDVDIAQAIADDLG---VKLEL 77 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 P N R L S ++D++ N T R + + + GQ FI K + + Sbjct: 78 RPTNPANRIPLLTSGKVDLIGANFTITDERAKQVDFSIPD--FATGQKFIARKG-VLKTP 134 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 ++ I GT E+TL + + I ++ + AA R A T D + Sbjct: 135 DDIAPLRIGADKGTVQEVTLRERYP----NTKVISYDDTPQAFAALRNGNVQAITQDDAK 190 Query: 201 LYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 L L ++ I P I++ A A +G+T V+ T + E+ G + Sbjct: 191 LVGLLGNLPEKVKADFEISPFSITREYQAVAAAKGETRLIENVNNTL---LKLEKEGKAE 247 Query: 259 KNINQVSKDTTNPDVQR 275 + N+ T R Sbjct: 248 QIYNRWFGPDTKAAQPR 264 >gi|300811388|ref|ZP_07091884.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497623|gb|EFK32649.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 281 Score = 178 bits (453), Expect = 9e-43, Method: Composition-based stats. Identities = 50/283 (17%), Positives = 110/283 (38%), Gaps = 20/283 (7%) Query: 1 MYKDF-----FVSILCLIILFFT-SFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-AN 53 M + F+++L L ++F S S ++S +K+ + G+ F+ + + Sbjct: 1 MARKLRELTAFMAVLLLSLVFTACSHSQSSSTYDRVKQTNTITWGMRADTRLFSMMDVDS 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 GF+VD RA++ I K++ ++ K R + L+ +D + T R Sbjct: 61 SKATGFEVDLARAVTKQILGPKGKMKIEYISEKSRIMDLKIGNVDAVMATMTNTPDRRKI 120 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS--ICVQAGTTTELTLADYFKAHNMKY 171 + + G+ I+ KK ++S+ + + I G+T + + Y Sbjct: 121 INF--SDTYFMAGETLIVPKKSKLNSIKDFNNSKYSIAAVKGSTADSDVHKYAPKA---- 174 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 I ++ A +A + +A D + L L +D + +LPD + P I Sbjct: 175 RVIFYDDYGSCYNALKAGKTNAMVSDNAVLAGLI--SDDKDKFKMLPDTFTVEPYGIGIK 232 Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 +G+ ++ V+ + G + + + +++ Sbjct: 233 KGEDKFTAEVNQALK---VLRKNGTYARLMKKWFNGVPGFNIK 272 >gi|312198103|ref|YP_004018164.1| extracellular solute-binding protein family 3 [Frankia sp. EuI1c] gi|311229439|gb|ADP82294.1| extracellular solute-binding protein family 3 [Frankia sp. EuI1c] Length = 311 Score = 178 bits (452), Expect = 9e-43, Method: Composition-based stats. Identities = 51/239 (21%), Positives = 91/239 (38%), Gaps = 11/239 (4%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDP 75 T+F +A L I++RG L G F G +GFD + R LS IF P Sbjct: 55 ATAFPASA-TLDRIRQRGELIVGTKFDQPLFGLQNPTTGKIEGFDTEIARLLSIRIFGSP 113 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-K 134 K++++ +K R +Q ++D++ R+ + A Y GQ ++ Sbjct: 114 DKVKFVETVSKNREPFIQQGKVDVVVATYTINDARKKLVDFA--GPYYTAGQDIMVKAGD 171 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 + V+ L+G +C G+T+E L +A ++ + R DA Sbjct: 172 TTVHGVTDLNGKKVCTVEGSTSETNL----RAKAPGASVVLVDTYSSCAEQLLDGRVDAV 227 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 T D L L + ++ + P +I+GD + ++ T + Sbjct: 228 TTDNVVLLGLVSQHK--DALKLVGTAFTSEPYGIGLIKGDDGFRAFLNDTLDEAYRNGD 284 >gi|239816574|ref|YP_002945484.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] gi|239803151|gb|ACS20218.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] Length = 304 Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats. Identities = 45/259 (17%), Positives = 96/259 (37%), Gaps = 12/259 (4%) Query: 20 FSTNAS---ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD-- 74 + A L IK G + G GF+ + N G+ ++ C + A+ + Sbjct: 26 VAAQAQENDTLSKIKASGAITFGYRESSFGFSYLDGNLKPVGYSIEICNRIVEAVKSELK 85 Query: 75 --PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 +I+Y + + R +Q+ +DI +T + R+ + P + ++ Sbjct: 86 LPAIEIKYQAVTSANRIPLVQNGTVDIECGSTTNLVERQKQVAF--SPDIFRYNVRMLVK 143 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 GI S++ L G ++ GTT+ L + K N++ + + + + + R Sbjct: 144 ADSGIRSIADLQGKTVATTTGTTSFRLLREADKGRNLEVNNLGGKDHSDSFLLVESGRAQ 203 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 A+ D L P + +I + + + + D + +V M+ + Sbjct: 204 AFVLDDILLAGQIANARNPKDFIITGESLRTENQSLMFRKDDPAFKALVDRVVSGMMKSG 263 Query: 253 ELGITQKNINQVSKDTTNP 271 E+ +K N+ P Sbjct: 264 EM---EKLYNKWFMSPIPP 279 >gi|111225073|ref|YP_715867.1| putative glutamate ABC transporter glutamate binding protein [Frankia alni ACN14a] gi|111152605|emb|CAJ64346.1| putative glutamate binding protein of ABC transporter system [Frankia alni ACN14a] Length = 330 Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 98/268 (36%), Gaps = 11/268 (4%) Query: 12 LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI 71 + + + + G + G F +G +GFDV+ ++ A+ Sbjct: 69 AAPTGAAASFAPGTTMARLHDAGKITVGTKFDQNLFGLKNLSGKPEGFDVEIAEIITDAL 128 Query: 72 FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131 K+ ++ + R +Q ++D++ R+ + A Y GQ ++ Sbjct: 129 GIPRDKVNFVETVSANREPFIQQGRVDMVVATYTINDKRKKVVDFA--GPYYVAGQSIMV 186 Query: 132 -HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190 K I+ L+G +C +G+T + A ++F+ + A + + Sbjct: 187 AKKNTDITGKDSLAGKKVCSVSGSTPAENIRKVAPAAQ----LVLFDVYSKCADALKNGQ 242 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 DA T D L L + P ++ +K P I +GDT + ++ T A + Sbjct: 243 VDAVTTDNVILLGLI--DKDPDAFKLVGGTFTKEPYGIGIKKGDTAFRTFINDTLEASYS 300 Query: 251 AEEL-GITQKNINQVSKDT-TNPDVQRF 276 + +V +T T P V R+ Sbjct: 301 DGRWAKAFSSTVGKVEPNTPTPPPVDRY 328 >gi|295693349|ref|YP_003601959.1| amino acid ABC transporter, amino acid-binding protein [Lactobacillus crispatus ST1] gi|295031455|emb|CBL50934.1| Amino acid ABC transporter, amino acid-binding protein [Lactobacillus crispatus ST1] Length = 289 Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats. Identities = 63/299 (21%), Positives = 113/299 (37%), Gaps = 42/299 (14%) Query: 1 MYKDFF---VSILCLIILFFTS----------FSTNASI------LGDIKKRGFLKCGIN 41 M K F +++L +++ + + + IK+RG+L+ + Sbjct: 2 MAKKIFNWIMAVLFAVVVVIAGYFGITRPGINGTASGDRWNNENNVSSIKRRGYLRVAVF 61 Query: 42 TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101 L + V + G G+DV R ++ + P +++ +NA R L S + DI+ Sbjct: 62 GDLPPYGWVNSQGKRVGYDVRLARRVAKDLGVKP---KFIQVNANNRIDTLNSNKADIVL 118 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 N T R+ ++ G I K I+S QL G S+ V GTT E Sbjct: 119 ANFTLTPERKSVA--SWTKPYMKVSVGVISPKSAPITSPKQLKGKSVIVTKGTTAE---- 172 Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221 +YF + + F+ + A + R A D S LYA P V + I Sbjct: 173 NYFTKQK-GVNLLKFDSKTQQFNAIKNGRGAALADDNSYLYAWVKR--NPKFTVGIKTIG 229 Query: 222 SKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGID 280 ++ A+ +G + + + E IT+ N N +++ + G + Sbjct: 230 PNQYISGAVKKG--------NKSLQKWMDRE---ITKLNSESFFTYDYNKELKPYFGKE 277 >gi|148544724|ref|YP_001272094.1| extracellular solute-binding protein [Lactobacillus reuteri DSM 20016] gi|184154076|ref|YP_001842417.1| glutamine ABC transporter substrate binding component [Lactobacillus reuteri JCM 1112] gi|227363849|ref|ZP_03847954.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri MM2-3] gi|325683059|ref|ZP_08162575.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri MM4-1A] gi|148531758|gb|ABQ83757.1| amino acid ABC transporter substrate-binding protein, PAAT family [Lactobacillus reuteri DSM 20016] gi|183225420|dbj|BAG25937.1| glutamine ABC transporter substrate binding component [Lactobacillus reuteri JCM 1112] gi|227071076|gb|EEI09394.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri MM2-3] gi|324977409|gb|EGC14360.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri MM4-1A] Length = 276 Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats. Identities = 52/286 (18%), Positives = 109/286 (38%), Gaps = 22/286 (7%) Query: 1 MYKDF-FVSILCLIILFFTSFSTNA------SILGDIKKRGFLKCGINTGLVGFAEVK-A 52 M K + +S+ L+ + + S +L + + + G+ F Sbjct: 1 MKKYWRLISLSALLFVALLTLSACGTSIAKKDVLTEDMRSQRITWGVKADTRLFGLENIR 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G +GF++D A++ I K ++P+ + R L++ ID + T RE Sbjct: 61 TGKLEGFEIDLATAITKKILGPQGKPIFVPVTSGTRVPLLKNGNIDAIMATMTITPEREK 120 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMK 170 + + GQ ++ K I ++S L+ GA I +G+ + +A + Sbjct: 121 QVDFTHS--YFDAGQSLLVKKGSPIKNISDLNRRGAVILGVSGSNSVKNVAKFAPKA--- 175 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 + + A ++ + DA T D LY + N + ++ +K P A+ Sbjct: 176 -RVLQLSDYAQAMTALKSKQGDALTTDNGILYGMAAENPG---YEVVGGNFTKEPYGIAV 231 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRF 276 + T + N ++W A+ E+ G + + + + + Q Sbjct: 232 NKNQTRFRNKLNW---ALREVEKDGTYNRLLLKWFGNVKGFNYQEM 274 >gi|315037806|ref|YP_004031374.1| glutamine ABC transporter [Lactobacillus amylovorus GRL 1112] gi|325956282|ref|YP_004286892.1| glutamine ABC transporter [Lactobacillus acidophilus 30SC] gi|312275939|gb|ADQ58579.1| glutamine ABC transporter [Lactobacillus amylovorus GRL 1112] gi|325332847|gb|ADZ06755.1| glutamine ABC transporter [Lactobacillus acidophilus 30SC] Length = 272 Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats. Identities = 45/276 (16%), Positives = 106/276 (38%), Gaps = 15/276 (5%) Query: 2 YKDFFVSILCLIILFFTSFST--NASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKG 58 K + ++ LI + ++ N S+ +++ + G+ F + + +G Sbjct: 4 KKFYLTFLIALITITLSACGQKKNESVYQTVRQTKTINWGVKADTPLFGSMSVKDSKIRG 63 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 F++D AL+ + +K ++ A + L++K ID + T R+ + Sbjct: 64 FEIDLAEALTHKMLGKNAKANFVTTTANTKIQLLKNKNIDAVIAAMTITPERKKQVNF-- 121 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + GQ ++ K I +V L+ + + GTT + + + F+ Sbjct: 122 SNPYFPAGQSIMVAKNSKIKNVKDLNNKRVLIVKGTTAADAVHKFAPKA----EILQFDD 177 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + AA +A + DA D L + +D P + + + P A+ +G T Sbjct: 178 YGQAFAALKADQGDALVTDNGILAGI--LHDNPG-YKLTGGTFTNQPYGIAVNKGQTA-- 232 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 ++ + A+ ++ G + + + +++ Sbjct: 233 -MMKHINTALDELKKDGTYTRLAKKWFGNIPGFNIK 267 >gi|319761716|ref|YP_004125653.1| extracellular solute-binding protein family 3 [Alicycliphilus denitrificans BC] gi|317116277|gb|ADU98765.1| extracellular solute-binding protein family 3 [Alicycliphilus denitrificans BC] Length = 277 Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats. Identities = 55/258 (21%), Positives = 106/258 (41%), Gaps = 14/258 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSK 77 S S A L DIK +G L CG+ F+ + +G+DVDFC A++ ++ K Sbjct: 24 STSAMADQLADIKAKGSLVCGVLGTSKPFSFPNPQTREIQGYDVDFCSAVAKSLG---VK 80 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++ P++ R L K+ID+++ N WT R + +A+ Y Q + + Sbjct: 81 LEIKPISVAARIPELTQKRIDVIAANLGWTAER--AQQIAYSDAYYVALQKVAVKRGAFA 138 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 S + L+G + G+T+E+ + + P+ F+ A + + D + Sbjct: 139 RS-TDLAGKRVSATKGSTSEIAIRAFLPTA----TPVTFQDPPPAFLALQQGKVDGFVVT 193 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 L LK ++ IL +++ + + +T V+ T E G Sbjct: 194 EMVLVQLKAQSEADHPIDILEPPLAEEFWGIGMRKEETALSGHVNKTLR---QMEASGEA 250 Query: 258 QKNINQVSKDTTNPDVQR 275 + ++ T+ ++R Sbjct: 251 ARIFDKWMGAGTDFKMKR 268 >gi|293602769|ref|ZP_06685209.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] gi|292818785|gb|EFF77826.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] Length = 260 Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats. Identities = 48/262 (18%), Positives = 99/262 (37%), Gaps = 11/262 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + LC + T+A L DI K G +K + F V ++ G+D Sbjct: 1 MNRRTLLLSLCTAASLLAAPLTHADTLDDIVKAGVIKIAVPQDFPPFGSVGSDMKPLGYD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D ++ + K++ +P+ + R LQ++++D++ + RE ++ + Sbjct: 61 IDTAALIAKQLG---VKLELVPVTSANRVPYLQTRKVDLVISSLGKNAEREKAIDFSDAY 117 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +F+G +SS + L+G +I V G ++ L+ A +E Sbjct: 118 APFFNG--VFGPADLKVSSAADLAGKTIGVTRGAVEDIELSKIAPA---SATLKRYEDNN 172 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A+ + + A+ P + +I SP + + + + Sbjct: 173 GTITAFLSGQVPMIATGNVVAAAILAR--NPPKKPETKFLIKNSPCYIGMNKDEPKLRAK 230 Query: 241 VSWTHYAMVTAEEL-GITQKNI 261 V+ A L I+QK + Sbjct: 231 VNDILAAAKHDGSLSAISQKWL 252 >gi|222148131|ref|YP_002549088.1| ABC transporter substrate binding protein (amino acid) [Agrobacterium vitis S4] gi|221735119|gb|ACM36082.1| ABC transporter substrate binding protein (amino acid) [Agrobacterium vitis S4] Length = 260 Score = 178 bits (451), Expect = 2e-42, Method: Composition-based stats. Identities = 49/273 (17%), Positives = 98/273 (35%), Gaps = 13/273 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M++ +++ + F +A LGDI KRG LK + F V + G+D Sbjct: 1 MHRRTLLALGLSLATFAAVLPAHADALGDITKRGTLKVAVPQDFPPFGSVGTDMQPVGYD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D ++ + K++ +P+ + R LQ+ ++D++ + RE + + Sbjct: 61 IDTAALIAKKLG---VKLELVPVTSANRIPYLQTNKVDLVISSLGKNPDREKVVDFSTAY 117 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +++G I S + LSG S+ V G +L L + +E Sbjct: 118 APFYNG--VFAPADTAIKSAADLSGKSVGVTRGAVEDLELTKVAPS---DAVIKRYEDNN 172 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +A+ + + DA A+ P + +I SP + + Sbjct: 173 GTISAFLSGQVDAVATGNVVAAAILA--KNPPKRPEPKFLIKNSPCFIGFNKNEPALAEK 230 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 ++ A+ G K + D+ Sbjct: 231 INAII---AEAKADGSLSKISEKWLGAPLPADL 260 >gi|145220806|ref|YP_001131484.1| extracellular solute-binding protein [Mycobacterium gilvum PYR-GCK] gi|145213292|gb|ABP42696.1| amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium gilvum PYR-GCK] Length = 324 Score = 178 bits (451), Expect = 2e-42, Method: Composition-based stats. Identities = 58/262 (22%), Positives = 105/262 (40%), Gaps = 11/262 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDD 74 F T +A++ +IK RG L G++ G F+ G+ GFDVD ++ IF Sbjct: 71 FATQEEADAAV-ANIKARGRLIVGLDIGSNLFSFRDPITGEITGFDVDIAGEIARDIFGT 129 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 PS+++Y L++ +R AL+ Q+D++ + T R+ + + Q + + Sbjct: 130 PSQVEYRILSSADRVDALRDNQVDVVVKTMTITCERKKLVNFSTA--YLIANQRILAPRD 187 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I S LSG +CV GTT+ + + + A + + DA Sbjct: 188 SNIRQSSDLSGKRVCVAKGTTSLERIQQISP----PPLIVGVVTWADCLVALQQRQVDAV 243 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 + D + L L + P H++ P +++ P + +T V+ T + Sbjct: 244 STDDAILAGL--VSQDPYLHIVGPS-MNEEPYGIGVNLQNTGLVRYVNGTLQRIRRDGTW 300 Query: 255 GITQKNINQVSKDTTNPDVQRF 276 + V P V R+ Sbjct: 301 NTLYRKWLTVLGPAPAPPVARY 322 >gi|107103712|ref|ZP_01367630.1| hypothetical protein PaerPA_01004783 [Pseudomonas aeruginosa PACS2] gi|218889476|ref|YP_002438340.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa LESB58] gi|254237070|ref|ZP_04930393.1| hypothetical protein PACG_03107 [Pseudomonas aeruginosa C3719] gi|254242877|ref|ZP_04936199.1| hypothetical protein PA2G_03646 [Pseudomonas aeruginosa 2192] gi|126169001|gb|EAZ54512.1| hypothetical protein PACG_03107 [Pseudomonas aeruginosa C3719] gi|126196255|gb|EAZ60318.1| hypothetical protein PA2G_03646 [Pseudomonas aeruginosa 2192] gi|218769699|emb|CAW25459.1| probable binding protein component of ABC transporter [Pseudomonas aeruginosa LESB58] Length = 276 Score = 177 bits (450), Expect = 2e-42, Method: Composition-based stats. Identities = 57/286 (19%), Positives = 106/286 (37%), Gaps = 16/286 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59 M + + + S + +A L DI+K+G + G + + G+ Sbjct: 1 MKIRLLGAAVAAVFTLIGS-AAHADDLADIRKKGEIVIGTLGTDEPNSFIDPKTRQIIGY 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 +VD ++ AI P + ++ R LQ +D+L+ + RE + ++ Sbjct: 60 EVDLGTEIAKAIGVKPV---FKQISVAARIPELQQGHVDLLAASLTHNKEREALVDFSYS 116 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I GQ ++ K G +S+ L G + G T E + + FE Sbjct: 117 II--VTGQKALVKKNAGFASLHDLDGKKVLTVKGGTQEPNIRKALPNAQ----VVTFETS 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYA-LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 ++ A + + A+ D SAL + ILP+ +S LA A +G+ + Sbjct: 171 QQALLALQQGKGQAFVDDESALVNDFGKLGAAAGGYAILPENLSTEALAIAFRKGNPQLK 230 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV-QRFLGIDKSS 283 +V T E G ++ + T ++ +R ID Sbjct: 231 QLVDSTLAG---LERSGAAEQLYLKWYGPGTKSNLSERHFKIDSDR 273 >gi|315442241|ref|YP_004075120.1| amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium sp. Spyr1] gi|315260544|gb|ADT97285.1| amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium sp. Spyr1] Length = 323 Score = 177 bits (450), Expect = 2e-42, Method: Composition-based stats. Identities = 58/262 (22%), Positives = 105/262 (40%), Gaps = 11/262 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDD 74 F T +A++ +IK RG L G++ G F+ G+ GFDVD ++ IF Sbjct: 70 FATQEEADAAV-ANIKARGRLIVGLDIGSNLFSFRDPITGEITGFDVDIAGEIARDIFGT 128 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 PS+++Y L++ +R AL+ Q+D++ + T R+ + + Q + + Sbjct: 129 PSQVEYRILSSADRVDALRDNQVDVVVKTMTITCERKKLVNFSTA--YLIANQRILAPRD 186 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I S LSG +CV GTT+ + + + A + + DA Sbjct: 187 SNIRQSSDLSGKRVCVAKGTTSLERIQQISP----PPLIVGVVTWADCLVALQQRQVDAV 242 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 + D + L L + P H++ P +++ P + +T V+ T + Sbjct: 243 STDDAILAGL--VSQDPYLHIVGPS-MNEEPYGIGVNLQNTGLVRYVNGTLQRIRRDGTW 299 Query: 255 GITQKNINQVSKDTTNPDVQRF 276 + V P V R+ Sbjct: 300 NTLYRKWLTVLGPAPAPPVARY 321 >gi|330429005|gb|AEC20339.1| family 3 extracellular solute-binding protein [Pusillimonas sp. T7-7] Length = 299 Score = 177 bits (450), Expect = 2e-42, Method: Composition-based stats. Identities = 40/235 (17%), Positives = 93/235 (39%), Gaps = 6/235 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF----DDPSKIQ 79 A+ L +++ G G + F + N GF + + ++ + D +++ Sbjct: 27 ATTLKKVEQTGTFTVGTRAASIPFNYLDDNNQQSGFAWEITQRVADKVKETVARDDIQVR 86 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 + + + R + ++ +D+ +T RE + + + G + I + Sbjct: 87 PMEVTPQTRIPLVANQTVDLECSSTTHNRERENQVSFSTS--FFIVGTRMLTLANSPIKN 144 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L+G ++ V AGTT E L ++ + I+ + ++ R DA D Sbjct: 145 WEDLAGKNVVVSAGTTAERLLRKVNDEKKLRVNIILSKDIDNTFMTVDTGRADAAMMDDM 204 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 LY+L + P + ++ +++ + + DTE+ +V M+ + E+ Sbjct: 205 VLYSLIARSPDPKKWKVVGEVLQPEAYGCMLRKDDTEFKELVDNVITGMMNSGEM 259 >gi|227544431|ref|ZP_03974480.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri CF48-3A] gi|300908278|ref|ZP_07125743.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri SD2112] gi|68160716|gb|AAY86804.1| lr0525 [Lactobacillus reuteri] gi|227185594|gb|EEI65665.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri CF48-3A] gi|300894525|gb|EFK87882.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri SD2112] Length = 276 Score = 177 bits (450), Expect = 2e-42, Method: Composition-based stats. Identities = 51/286 (17%), Positives = 109/286 (38%), Gaps = 22/286 (7%) Query: 1 MYKDF----FVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVK-A 52 M K + ++L + +L ++ +L + + + G+ F Sbjct: 1 MKKYWRLISLSALLFVALLTLSACGTSIAKKDVLTEDMRSQRIIWGVKADTRLFGLENIR 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G +GF++D A++ I K ++P+ + R L++ ID + T RE Sbjct: 61 TGKLEGFEIDLATAITKKILGPQGKPIFVPVTSGTRVPLLKNGNIDAIMATMTITPEREK 120 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMK 170 + + GQ ++ K I ++S L+ GA I +G+ + +A + Sbjct: 121 QVDFTHS--YFDAGQSLLVKKGSPIKNISDLNRRGAIILGVSGSNSVKNVAKFAPKA--- 175 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 + + A ++ + DA T D LY + N + ++ +K P A+ Sbjct: 176 -RALQLSDYAQAMTALKSKQGDALTTDNGILYGMAAENPG---YEVVGGNFTKEPYGIAV 231 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRF 276 + T + N ++W A+ E+ G + + + + + Q Sbjct: 232 NKNQTRFRNKLNW---ALREVEKDGTYNRLLLKWFGNVKGFNYQEM 274 >gi|67923258|ref|ZP_00516743.1| extracellular solute-binding protein, family 3 [Crocosphaera watsonii WH 8501] gi|67854884|gb|EAM50158.1| extracellular solute-binding protein, family 3 [Crocosphaera watsonii WH 8501] Length = 300 Score = 177 bits (450), Expect = 2e-42, Method: Composition-based stats. Identities = 54/269 (20%), Positives = 108/269 (40%), Gaps = 15/269 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K F + L L++ + + A IL I++ G + G FA + G+W G+ Sbjct: 2 MKKKFVLFALTLLLTATSQNAVWAGEILERIRQTGVITAGTRKDATPFAYINEKGEWVGY 61 Query: 60 DVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +D + + P +++ + + + RF +++K+IDI ++ +T R+ + Sbjct: 62 SIDILEIIRQNVEKELGKPIRLKLVEVTPQNRFNKVKNKEIDIECASSTFTWERDKIIDF 121 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + + G + K + ++ L+G I V TT E + A + Sbjct: 122 SVS--YFASGTKIMRKKGSSLGTIDSLAGRRIGVIPNTTNEQAIKIQQPAAI----IVPI 175 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDT 235 + E + +A GD L AL+L N+ ++P+ A I + ++ Sbjct: 176 KNRIEGLEKLKKGEIEAIAGDGIVLQALQLENNNGDRFEVVPEFPYVYEAYACMIPEDES 235 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQV 264 W +V+++ + GI QV Sbjct: 236 AWRGMVNYSLVKFME----GIISDQPQQV 260 >gi|332160644|ref|YP_004297221.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325664874|gb|ADZ41518.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 263 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 48/263 (18%), Positives = 106/263 (40%), Gaps = 12/263 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L +++ + + A L I++RG L+ + F V + +G+D Sbjct: 3 MKKRML-ALLGAVLILVQAPAVLADQLEKIQQRGVLRVAVPQDFPPFGSVGTDLQPQGYD 61 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D L+ + K+Q +P+ + R LQ+ ++D++ + RE ++ + Sbjct: 62 IDMAHYLADKM---KLKLQLVPVTSANRVPYLQTDKVDLVISSLGKNPEREKAIAFSRAY 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +F G K+ + QL+G ++ V G ++ L++ +E Sbjct: 119 APFF--LGVFGAKEDALKQPEQLAGKTVGVTRGAVEDMVLSELAPK---DAQIKRYEDNN 173 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +AY + + D + AL P++ + ++ SP + QG+ Sbjct: 174 TTLSAYLSGQVDYLATGNLVVSALARQ--NPAQAPVAKFMLKDSPCYIGLRQGEPALKAK 231 Query: 241 VSWTHYAMVTAEEL-GITQKNIN 262 V + + L G+++K + Sbjct: 232 VDALIVEALQDKTLNGLSEKWLK 254 >gi|284009203|emb|CBA76274.1| amino acid ABC transporter, substrate-binding protein [Arsenophonus nasoniae] Length = 274 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 57/278 (20%), Positives = 102/278 (36%), Gaps = 17/278 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59 M + ++L + + T A L IKK G ++ + F + A G+ Sbjct: 1 MKSNLITTLLSVALALVTGL-AKADKLESIKKSGVIRIAVFDSNPPFGFIDAKTKKLVGY 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D A+++ K+ P N R L ++D++ N T R + + Sbjct: 60 DIDIAEAIANDFG---VKLVLRPTNPANRIPLLTGGKVDLIGANFTITNERAKQVDFSIP 116 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ FI + + + I GT E+TL + + I ++ Sbjct: 117 D--FATGQKFIARIG-VLKTPDDIIPLRIGADKGTVQEITLRERYP----NTKVISYDDT 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEW 237 AA R A T D + L L +++ I P +++ A A +G+T Sbjct: 170 PLAFAALRNGNVQAITQDDAKLVGLLGNLPAKIKADYEISPFSLTREYQALAAAKGETNL 229 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 N V+ T + E+ G + N+ T + R Sbjct: 230 INAVNNTL---LKLEKSGQAEIIYNRWFGPATKAALPR 264 >gi|197117373|ref|YP_002137800.1| amino acid ABC transporter amino acid-binding protein [Geobacter bemidjiensis Bem] gi|197086733|gb|ACH38004.1| amino acid ABC transporter, amino acid-binding protein [Geobacter bemidjiensis Bem] Length = 264 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 63/273 (23%), Positives = 101/273 (36%), Gaps = 15/273 (5%) Query: 1 MYKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K +S L ++ L ++F+ + S +KK G L G++ G+ GF Sbjct: 1 MKKILAILSSLLVLTLAVSAFAADGS-FKRVKKEGTLTIGLDDAFPPMGYRNDKGELVGF 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D + + KI++ P AL SK+ D + T R +AF Sbjct: 60 DIDAAEEVGKRLG---IKIKWQPTAWDGVMHALNSKKFDCIWNGMTITDER--KKEVAFT 114 Query: 120 PITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 DGQ ++ +K ++ L GA + VQ G++ + A +E Sbjct: 115 KPYKMDGQVAVVRFGEKKFKKLADLKGAKVGVQKGSSAVEAVKKLPAA---PAEVREYED 171 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + + R D D + RP + I+P I+K P A + D E Sbjct: 172 NPKALLDLESKRLDTVVIDDAT--GRDFIAKRPGKFQIIPGNITKEPFGVAFRKDDVELR 229 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 V T MV + K +D TNP Sbjct: 230 EAVQKTLDKMVKDGTMAKISK--KWFGEDITNP 260 >gi|119713445|gb|ABL97506.1| extracellular solute-binding protein family 3 [uncultured marine bacterium HOT0_02H05] Length = 299 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 54/269 (20%), Positives = 108/269 (40%), Gaps = 15/269 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K F + L L++ + + A IL I++ G + G FA + G+W G+ Sbjct: 1 MKKKFVLFALTLLLTATSQNAVWAGEILERIRQTGVITAGTRKDATPFAYINEKGEWVGY 60 Query: 60 DVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +D + + P +++ + + + RF +++K+IDI ++ +T R+ + Sbjct: 61 SIDILEIIRQNVEKELGKPIRLKLVEVTPQNRFNKVKNKEIDIECASSTFTWERDKIIDF 120 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + + G + K + ++ L+G I V TT E + A + Sbjct: 121 SVS--YFASGTKIMRKKGSSLGTIDSLAGRRIGVIPNTTNEQAIKIQQPAAI----IVPI 174 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDT 235 + E + +A GD L AL+L N+ ++P+ A I + ++ Sbjct: 175 KNRIEGLEKLKKGEIEAIAGDGIVLQALQLENNNGDRFEVVPEFPYVYEAYACMIPEDES 234 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQV 264 W +V+++ + GI QV Sbjct: 235 AWRGMVNYSLVKFME----GIISDQPQQV 259 >gi|307728863|ref|YP_003906087.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1003] gi|307583398|gb|ADN56796.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1003] Length = 267 Score = 177 bits (449), Expect = 3e-42, Method: Composition-based stats. Identities = 50/258 (19%), Positives = 95/258 (36%), Gaps = 11/258 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + S+L IL T+ + +A L +I K G LK + F V + +G+D+ Sbjct: 10 RRTLLASLLVSSILAITAHAAHADTLDNIVKAGVLKVAVPEDYPPFGSVGPDMKPQGYDI 69 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D L+ ++ K++ +P+N+ R LQ+ ++D++ + T RE + + Sbjct: 70 DTAALLAKSM---NVKLELVPVNSANRIPYLQTNKVDLVISSLGKTPDREKVIDFSTAYA 126 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y+ QG +S + L+G ++ G E+ L+ +K FE Sbjct: 127 PYY--QGVFGPADIKVSGPADLTGKTVGATRGALEEIGLSQMAPNATIK----RFEDNNA 180 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 AA+ + + A+ P +I SP + + + V Sbjct: 181 TIAAFLSGQVQLIAAGNIVAAAILA--KNPPRRPEPKFVIKNSPCFVGMNKNEPRLQQKV 238 Query: 242 SWTHYAMVTAEELGITQK 259 + L K Sbjct: 239 NAAIAQAKQDGTLNTMSK 256 >gi|227892707|ref|ZP_04010512.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus ultunensis DSM 16047] gi|227865484|gb|EEJ72905.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus ultunensis DSM 16047] gi|323466211|gb|ADX69898.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus helveticus H10] Length = 286 Score = 176 bits (448), Expect = 3e-42, Method: Composition-based stats. Identities = 59/241 (24%), Positives = 102/241 (42%), Gaps = 15/241 (6%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 +N + + IK+RG+++ G+ L + V + G GFD+ R L+ + P ++ Sbjct: 42 SNNNSVTQIKRRGYIRIGVYGDLPPYGWVNSQGKRVGFDLRLARELAKELGVKP---RFT 98 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 LN R AL S ++D++ N T R + A G + K I+S Sbjct: 99 QLNGNNRVDALNSNKVDMVLANFTKTPERAEVVDFAH--PYMKVSTGVVSPKSHPITSEK 156 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 QL G + + G+T E +YF A+ + F+ + A + R A D S L Sbjct: 157 QLRGKQLILLKGSTGE----NYF-ANRPGIKLLRFDSETQQFNAMKNKRGAALADDNSYL 211 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 YA P V + I +APA+ +G+ +++ WT+ + G +K+ Sbjct: 212 YAWIK--KNPQYVVGIRSIGPHQFIAPAVKKGN---KSLLKWTNKQIDRLTAEGFFKKDY 266 Query: 262 N 262 Sbjct: 267 Q 267 >gi|33602282|ref|NP_889842.1| solute-binding protein [Bordetella bronchiseptica RB50] gi|33576721|emb|CAE33799.1| probable solute-binding protein [Bordetella bronchiseptica RB50] Length = 272 Score = 176 bits (448), Expect = 3e-42, Method: Composition-based stats. Identities = 58/276 (21%), Positives = 107/276 (38%), Gaps = 14/276 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59 M K +++L + +L + +A L DIK RG L CG F+ A G+ Sbjct: 1 MMKRNVLAVLTISLLGL-AGPAHADQLDDIKARGELLCGTLGTSQPFSYQDAATRTVVGY 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD C+ ++ + K+ Y L+ R L ++DIL+ N ++ R + +AF Sbjct: 60 DVDMCKLVADKLG---VKVNYKLLSVAARVPELNESRVDILAANLGYSPER--AEQIAFS 114 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y Q ++ K + ++ ++G + G+++E + K + F Sbjct: 115 HTYYVSPQKLLVRKDSNLQTIESVNGRRVAATKGSSSEREIKRIL----DKSQVLGFTDS 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 A + + DA L L L + + I+ + P + + +T + Sbjct: 171 SASYLALQQKKVDAQFASELVLVRLMLQSPPTAPVSIIDKAVFDEPWGLGMRKSETRFIA 230 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 V+ AE G Q+ + T +QR Sbjct: 231 KVNEILD---QAEASGEAQRLFEKWFGAQTPYKLQR 263 >gi|300782280|ref|YP_003762571.1| ABC transporter substrate-binding protein [Amycolatopsis mediterranei U32] gi|299791794|gb|ADJ42169.1| ABC transport system substrate-binding protein [Amycolatopsis mediterranei U32] Length = 314 Score = 176 bits (448), Expect = 3e-42, Method: Composition-based stats. Identities = 50/265 (18%), Positives = 107/265 (40%), Gaps = 14/265 (5%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRAL 67 + L+ ++ ++S + DI+KRG L G++ F G+ +GFD+D A+ Sbjct: 53 LASLVPASSSTTVPDSSTMSDIRKRGKLIAGVDQTTYLFGFRNPTSGNLEGFDIDMVNAV 112 Query: 68 SSAIFDDP-SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 + AIF +Q+ + + +R L+ Q+DI+ R T R+ + + Y G Sbjct: 113 AKAIFGSADGHVQFRAIPSSQREEVLKKHQVDIVVRTYSITCARKKDVEF--SSVYYVAG 170 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 Q ++ K+ +S LSG +C +T+ +A K P+ + + Sbjct: 171 QKILVPKESKAQKLSDLSGKRVCATKKSTSLAKIA----TDAAKPVPVSVDNWSDCLVML 226 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + + DA + D + L + + S + + +++ + + + V+ Sbjct: 227 QQGQVDAVSTDDTILAGMAAQD---STLEVRGEPLTQENYGIGVPKDRPDLVRYVNAVLD 283 Query: 247 AMVTAEELGITQKNINQVSKDTTNP 271 + G+ Q + + + P Sbjct: 284 QIRG---NGVWQDSYRRWVEARLGP 305 >gi|186682192|ref|YP_001865388.1| extracellular solute-binding protein [Nostoc punctiforme PCC 73102] gi|186464644|gb|ACC80445.1| extracellular solute-binding protein, family 3 [Nostoc punctiforme PCC 73102] Length = 322 Score = 176 bits (448), Expect = 3e-42, Method: Composition-based stats. Identities = 52/293 (17%), Positives = 104/293 (35%), Gaps = 21/293 (7%) Query: 2 YKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + +I LI+ A + + + G L G + + FA + G G+ Sbjct: 23 KSKIYSAIFGLILSVSLPGVAGAETVMQKVARTGVLTAGTSRDALPFAYSDSQGKLIGYS 82 Query: 61 VDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 VD + + +++ + + ER + ++Q+DI+ + +T R+ + + Sbjct: 83 VDMLTLIQKQLEKELGKKIQLKLVGVTPAERIPKIINRQVDIICDASSFTWERDKKIDFS 142 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 G ++ K + S L + V AGTT E T+ + Y F+ Sbjct: 143 VS--YGVTGTQILIKKDSNLGSPESLINKRVGVLAGTTNEETIKQVQTQAKLVY----FK 196 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDTE 236 E AA + DA+ D L T I P S+ +A + + +++ Sbjct: 197 TRAEGFAALEQGKIDAFASDSIILEGWLQTAKNQDSFAIAPPRPYSREGIACMVPENNSK 256 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEAL 289 + + V+++ + G N V+ R+ G + L Sbjct: 257 FLDSVNYSLVKFMQ----GFVNDNPKYVAI------FDRWFGSQGVVFLNRDL 299 >gi|256851553|ref|ZP_05556942.1| amino acid ABC transporter periplasmic protein [Lactobacillus jensenii 27-2-CHN] gi|260660976|ref|ZP_05861891.1| amino acid ABC transporter periplasmic protein [Lactobacillus jensenii 115-3-CHN] gi|282932201|ref|ZP_06337649.1| glutamine-binding protein [Lactobacillus jensenii 208-1] gi|297206368|ref|ZP_06923763.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus jensenii JV-V16] gi|256616615|gb|EEU21803.1| amino acid ABC transporter periplasmic protein [Lactobacillus jensenii 27-2-CHN] gi|260548698|gb|EEX24673.1| amino acid ABC transporter periplasmic protein [Lactobacillus jensenii 115-3-CHN] gi|281303688|gb|EFA95842.1| glutamine-binding protein [Lactobacillus jensenii 208-1] gi|297149494|gb|EFH29792.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus jensenii JV-V16] Length = 275 Score = 176 bits (448), Expect = 3e-42, Method: Composition-based stats. Identities = 45/253 (17%), Positives = 91/253 (35%), Gaps = 15/253 (5%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 IK + G+ F + +GF++D + LS + K+ + Sbjct: 31 DTYDKIKASQTITWGVKADTRLFGIMNIKTSQLEGFEIDLAKDLSKKMLGKNVKVNLVQT 90 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 AK + L++ +D L T R+ + + GQ ++ K + +V L Sbjct: 91 TAKTKIPLLRNGSVDALLSTMTITEERKKIVDF--STPYFNAGQAILVPKNSKLKNVYDL 148 Query: 144 S--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 G ++ GTT + + N ++ + +A +A + A T D L Sbjct: 149 KKRGITVLAVKGTTAVANIKKFAPKAN----VSEYDDYGQAFSALKAGQGQALTTDNGIL 204 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 + ++ P I+ + P A+ +GDT+ N + A+ + G QK + Sbjct: 205 AGIA--DENPG-FKIVGGTFTSEPYGIAVRKGDTKLRNKLD---QALEELKADGTYQKLL 258 Query: 262 NQVSKDTTNPDVQ 274 + ++ Sbjct: 259 KKWFSGIPGFSIK 271 >gi|153011819|ref|YP_001373032.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC 49188] gi|151563707|gb|ABS17203.1| extracellular solute-binding protein family 3 [Ochrobactrum anthropi ATCC 49188] Length = 260 Score = 176 bits (448), Expect = 3e-42, Method: Composition-based stats. Identities = 48/253 (18%), Positives = 100/253 (39%), Gaps = 11/253 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M F++ + ++ F + +A +L DI R ++ + T F V ++ +G D Sbjct: 1 MKTKLFIAAMAALVTSFVAAPASADMLDDIIARKTIRVAVPTDYPPFGSVGSDMQPQGMD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D R ++ ++ + ++ +P+ A R LQ+ + D+ + T R + + Sbjct: 61 IDMARLIAKSLGVE---VELIPVTAPNRVAYLQTGKSDLTISSLGKTEERAKVIDFSIAY 117 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +FD K I L+G +I V G+ + L + +K FE Sbjct: 118 SPFFDA--VFGAKNPPIEKHEDLTGHTIAVTRGSMQDQELEELAPGAVVK----RFEDNN 171 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 AA+ + + + A+K + P + L +++ SP + +G+T Sbjct: 172 STIAAFISGQVAMFASGTPVAAAIKKRS--PDLDLELKIVLANSPCYVGVAKGETRLLEK 229 Query: 241 VSWTHYAMVTAEE 253 V+ + E Sbjct: 230 VNSIIREAKASGE 242 >gi|260103307|ref|ZP_05753544.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus helveticus DSM 20075] gi|260082888|gb|EEW67008.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus helveticus DSM 20075] Length = 286 Score = 176 bits (448), Expect = 3e-42, Method: Composition-based stats. Identities = 59/241 (24%), Positives = 102/241 (42%), Gaps = 15/241 (6%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 +N + + IK+RG+++ G+ L + V + G GFD+ R L+ + P ++ Sbjct: 42 SNNNSVTQIKRRGYIRIGVYGDLPPYGWVNSQGKRVGFDLRLARELAKELGVKP---RFT 98 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 LN R AL S ++D++ N T R + A G + K I+S Sbjct: 99 QLNGNNRVDALNSNKVDMVLANFTKTPERAEVVDFAH--PYMKVSTGVVSPKSHPITSEK 156 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 QL G + + G+T E +YF A+ + F+ + A + R A D S L Sbjct: 157 QLRGKQLILLKGSTGE----NYF-ANRPGIKLLRFDSETQQFNAMKNKRGAALADDNSYL 211 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 YA P V + I +APA+ +G+ +++ WT+ + G +K+ Sbjct: 212 YAWIK--KNPQYVVGIRSIGPHQFIAPAVKKGN---KSLLKWTNKQIDRLTAEGFFKKDY 266 Query: 262 N 262 Sbjct: 267 Q 267 >gi|325957194|ref|YP_004292606.1| amino acid ABC transporter periplasmic protein [Lactobacillus acidophilus 30SC] gi|325333759|gb|ADZ07667.1| amino acid ABC transporter periplasmic protein [Lactobacillus acidophilus 30SC] Length = 286 Score = 176 bits (448), Expect = 3e-42, Method: Composition-based stats. Identities = 59/241 (24%), Positives = 102/241 (42%), Gaps = 15/241 (6%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 +N + + IK+RG+++ G+ L + V + G GFD+ R L+ + P ++ Sbjct: 42 SNNNSVTQIKRRGYIRIGVYGDLPPYGWVNSQGKRVGFDLRLARELAKELGVKP---RFT 98 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 LN R AL S ++D++ N T R + A G + K I+S Sbjct: 99 QLNGNNRVDALNSNKVDMVLANFTKTPERAEVVDFAH--PYMKVSTGVVSPKSHPITSEK 156 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 QL G + + G+T E +YF A+ + F+ + A + R A D S L Sbjct: 157 QLRGKQLILLKGSTGE----NYF-ANRPGIKLLRFDSETQQFNAMKNKRGAALADDNSYL 211 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 YA P V + I +APA+ +G+ +++ WT+ + G +K+ Sbjct: 212 YAWIK--KNPQYVVGIRSIGPHQFIAPAVKKGN---KSLLKWTNKQINRLTAEGFFKKDY 266 Query: 262 N 262 Sbjct: 267 Q 267 >gi|108810146|ref|YP_654062.1| putative periplasmic solute-binding protein [Yersinia pestis Antiqua] gi|167401600|ref|ZP_02307094.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|108782059|gb|ABG16117.1| putative periplasmic solute-binding protein [Yersinia pestis Antiqua] gi|167048982|gb|EDR60390.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Yersinia pestis biovar Antiqua str. UG05-0454] Length = 253 Score = 176 bits (447), Expect = 4e-42, Method: Composition-based stats. Identities = 52/247 (21%), Positives = 95/247 (38%), Gaps = 16/247 (6%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 + DIK+ G ++ + F + G+DVD A++ + K++ N Sbjct: 1 MDDIKQAGVVRIAVFDSNPPFGYIDPQTKKLVGYDVDVANAIAKDLG---VKVELRATNP 57 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 R L SK++D+++ N T R + + + GQ FI K + + + Sbjct: 58 ANRIPLLASKKVDLIAANFTITDERAKEVNFSL--PYFATGQKFIARKG-VLKTPEDIGK 114 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 I GT E+TL +++ I ++ A R A T D + L L Sbjct: 115 LRIGADKGTVQEITLREHYPTA----KVISYDDTPLAFTALRNGNVQAITQDDAKLVGLL 170 Query: 206 --LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 + + ++ I P I+K I +G+ +V+ T + E+ G K ++ Sbjct: 171 GNIPEAQKADFEISPFSITKEYQGVGIPKGEDRLTAVVNETL---IKLEKEGDAVKIYDR 227 Query: 264 VSKDTTN 270 TN Sbjct: 228 WFGPETN 234 >gi|163793471|ref|ZP_02187446.1| extracellular solute-binding protein, family 3 [alpha proteobacterium BAL199] gi|159181273|gb|EDP65788.1| extracellular solute-binding protein, family 3 [alpha proteobacterium BAL199] Length = 304 Score = 176 bits (447), Expect = 4e-42, Method: Composition-based stats. Identities = 56/284 (19%), Positives = 106/284 (37%), Gaps = 16/284 (5%) Query: 2 YKDFFVSIL----CLIILFFTSFSTNA------SILGDIKKRGFLKCGINTGLVGFAEVK 51 ++ F L + +S + A S L + RG L+ G + + Sbjct: 18 RRNLFAGALGTAVVAGAVLGSSKAAQATVDSSKSKLQQVLSRGVLRVGTGSTNPPWHFED 77 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G G D+D R ++ ++FDDP+K++++ + R +L + ++D++ + T R Sbjct: 78 DTGKLVGMDIDMARLIAKSLFDDPTKVEFVIQGSDARIPSLITDKVDVICQWMTITAGRA 137 Query: 112 ISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 + Y +G G ++ L A V+ G + + ++ + Sbjct: 138 QQVEF--TVPYYREGVGLLVMADNPKYKKFDDLMMAGDSVKVGAMQNVFIEEWIHKGLPQ 195 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 F+ + A A R DAY GD SA+ L N P + + A A+ Sbjct: 196 AKVDQFDSPDTTLQALNAGRVDAYLGDQSAIRWLM--NQFPGRYADSGYGWLPNSYASAV 253 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK-DTTNPDV 273 GD W N V+ + + + + + + D P V Sbjct: 254 RPGDPVWLNWVNTVYREALMGVDFDTMKASYKKWFGIDVATPKV 297 >gi|260904718|ref|ZP_05913040.1| extracellular solute-binding protein family 3 [Brevibacterium linens BL2] Length = 299 Score = 176 bits (447), Expect = 4e-42, Method: Composition-based stats. Identities = 45/258 (17%), Positives = 94/258 (36%), Gaps = 15/258 (5%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQYL 81 ++ K G LK G+ G VKA +GFD++ + +++ + P +I+Y Sbjct: 53 DSKTWKAAKDAGELKVGVKYDQPGLGNVKAGSEQPEGFDIEIAKMVAAQLGFSPDQIKYT 112 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 + R LQ ID++ R+ + A Y GQ ++ + I+ Sbjct: 113 ETVSANREPFLQQGNIDMVVATYTINDERKKVVDFA--GPYYVAGQDLLVAEDSDIAGPD 170 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L G +C G+T + + + + ++ + ++ DA T D + L Sbjct: 171 DLDGKKVCSVDGSTPAQNIEEKYDKA----ELVAYDTYSKCVTDLQSGSVDAVTTDDAIL 226 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 + E ++ ++ P + +GD + V+ + G +K Sbjct: 227 RGYAKQYE--GEFKVVGKPFTEEPYGVGLPKGDDAMRDAVNDALQ---KGMDDGDWKKAF 281 Query: 262 NQVSKDTTN---PDVQRF 276 + P++ R+ Sbjct: 282 EYTLGSADDVEMPEIDRY 299 >gi|194466983|ref|ZP_03072970.1| extracellular solute-binding protein family 3 [Lactobacillus reuteri 100-23] gi|194454019|gb|EDX42916.1| extracellular solute-binding protein family 3 [Lactobacillus reuteri 100-23] Length = 276 Score = 176 bits (447), Expect = 4e-42, Method: Composition-based stats. Identities = 49/286 (17%), Positives = 104/286 (36%), Gaps = 22/286 (7%) Query: 1 MYK-------DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-A 52 M K + I L + + +L + + + G+ F Sbjct: 1 MKKYWRLISLSALLFITLLTLSACGTSIAKKDVLTEDMRSQRITWGVKADTRLFGLENIR 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G +GF++D A++ I K ++P+ + R L++ ID + T RE Sbjct: 61 TGKLEGFEIDLATAITKKILGPQGKPIFVPVTSGTRVPLLKNGNIDAIMATMTITPEREK 120 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMK 170 + + GQ ++ K I +++ L+ GA I +G+ + +A + Sbjct: 121 QVDFTHS--YFDAGQSLLVRKGSPIKNINDLNRRGAVILGVSGSNSVKNVARFAPKA--- 175 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 + + A ++ + DA T D LY + N + ++ +K P A+ Sbjct: 176 -RVLQLSDYAQAMTALKSKQGDALTTDNGILYGMAAENPG---YEVVGGNFTKEPYGIAV 231 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRF 276 + + N ++W A+ E+ G + + + + + Q Sbjct: 232 NKNQARFRNKLNW---ALREVEKDGTYNRLLLKWFGNVKGFNYQEM 274 >gi|317047031|ref|YP_004114679.1| family 3 extracellular solute-binding protein [Pantoea sp. At-9b] gi|316948648|gb|ADU68123.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b] Length = 261 Score = 176 bits (447), Expect = 4e-42, Method: Composition-based stats. Identities = 47/272 (17%), Positives = 102/272 (37%), Gaps = 13/272 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K +++ ++ S A L DI+KRG ++ + F V + +G+D+ Sbjct: 1 MKKVLMAVAGAALMMAQVGSAMADQLQDIQKRGVIRIAVPQDFPPFGSVGTDLQPQGYDI 60 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D + L+ + K+Q +P+++ R LQ+ ++D++ + RE + + Sbjct: 61 DMAKYLAKEM---KLKLQLVPVSSANRVPYLQTDKVDLVISSMGKNAEREKVIDFSRAYA 117 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 +F G K + I + LSG SI V G ++ L +E Sbjct: 118 PFF--LGVFGPKGEEIKDAAALSGKSIGVTRGAVEDMVLTGVAPK---DAEVKRYEDNNT 172 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +AY + + + A+ P++ + ++ SP + + + + V Sbjct: 173 TLSAYLSGQVQFIATGNLVVAAIARQ--NPAKAPVPQFMLKDSPCFIGLKKDEPALKDKV 230 Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 + + + G K + K ++ Sbjct: 231 NALIEQGI---KDGTLNKLSEEWLKAPLPANL 259 >gi|241765002|ref|ZP_04762998.1| extracellular solute-binding protein family 3 [Acidovorax delafieldii 2AN] gi|241365399|gb|EER60192.1| extracellular solute-binding protein family 3 [Acidovorax delafieldii 2AN] Length = 297 Score = 176 bits (446), Expect = 5e-42, Method: Composition-based stats. Identities = 47/277 (16%), Positives = 92/277 (33%), Gaps = 10/277 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 M + L L S + ++L + G L V F+ + G G+ Sbjct: 1 MKVRHWGLAWGLAALCGVSAVSAQTVLEKVSAGGALVIAHRESSVPFSYIDPKSGKPIGY 60 Query: 60 DVDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +D C L+ + ++ L + A R ++ + D+ +T R + Sbjct: 61 AIDLCLRLADVVRKKTGMKDMPVEMLQVTAANRLAMVEQHKADLECGSTTNNAERRQKVA 120 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 Y G ++ I + L+G + GTT ++H M + Sbjct: 121 F--TVPHYITGARLLVKASSSIDRLEDLAGKKLVSTKGTTPLKAAEQANRSHLMGITIVE 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 E DA+ D LY L P+ ++ ++ PLA + + D Sbjct: 179 APDHERGVEMVEKGEADAFLMDDVLLYGLAAGRPHPAALKVVGRFVTTEPLAIVLPKNDP 238 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272 E+ +V ++T+ E+ ++ P+ Sbjct: 239 EFKKLVDDEMRRLITSREI---YPIYDKWFAKPIPPN 272 >gi|327183916|gb|AEA32363.1| amino acid ABC transporter periplasmic protein [Lactobacillus amylovorus GRL 1118] Length = 286 Score = 176 bits (446), Expect = 5e-42, Method: Composition-based stats. Identities = 59/241 (24%), Positives = 102/241 (42%), Gaps = 15/241 (6%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 +N + + IK+RG+++ G+ L + V + G GFD+ R L+ + P ++ Sbjct: 42 SNNNSVTQIKRRGYIRIGVYGDLPPYGWVNSQGKRVGFDLRLARELAKELGVKP---RFT 98 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 LN R AL S ++D++ N T R + A G + K I+S Sbjct: 99 QLNGNNRVDALNSDKVDMVLANFTKTPERAEVVDFAH--PYMKVSTGVVSPKSHPITSEK 156 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 QL G + + G+T E +YF A+ + F+ + A + R A D S L Sbjct: 157 QLRGKQLILLKGSTGE----NYF-ANRPGIKLLRFDSETQQFNAMKNKRGAALADDNSYL 211 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 YA P V + I +APA+ +G+ +++ WT+ + G +K+ Sbjct: 212 YAWIK--KNPQYVVGIRSIGPHQFIAPAVKKGN---KSLLKWTNKQIDRLTAEGFFKKDY 266 Query: 262 N 262 Sbjct: 267 Q 267 >gi|153953344|ref|YP_001394109.1| extracellular amino acid-binding protein [Clostridium kluyveri DSM 555] gi|219853973|ref|YP_002471095.1| hypothetical protein CKR_0630 [Clostridium kluyveri NBRC 12016] gi|146346225|gb|EDK32761.1| Predicted extracellular amino acid-binding protein [Clostridium kluyveri DSM 555] gi|219567697|dbj|BAH05681.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 268 Score = 176 bits (446), Expect = 5e-42, Method: Composition-based stats. Identities = 54/268 (20%), Positives = 94/268 (35%), Gaps = 14/268 (5%) Query: 1 MYKDF---FVSILCLIILFFTSFSTNAS---ILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M K F + I + IL T S DIK +G G++ G Sbjct: 1 MKKKFGILTIVIFLMGILLTGCGQTQKSNDTSWDDIKAKGKFVVGLDDSFPPMGFRDEKG 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 GFD+D +A + + K+++ P+ L+L +K ID++ T R+ + Sbjct: 61 QIVGFDIDMAKAAAEKLG---VKVEFKPVEWDGVILSLNNKDIDVIWNGLTITEERKKQI 117 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + + Q ++ K I+S LSG ++ +Q G+++E L Sbjct: 118 VF--SKVYLQNKQIIVVQKNSTINSKKDLSGKTVGLQMGSSSEKALNADADTSKSLKEVR 175 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + E R DA D + +P + IL D I + D Sbjct: 176 KYSNNTEALLDLSQGRTDAVIVD--EVVGRYYIEKKPDLYKILDDNFGVEDYGVGIRKTD 233 Query: 235 TEWYNIVSWTHYAMVTAE-ELGITQKNI 261 T + + + + I+QK Sbjct: 234 TSFKEKLDEALDTIKSDGTADKISQKWF 261 >gi|120401719|ref|YP_951548.1| extracellular solute-binding protein [Mycobacterium vanbaalenii PYR-1] gi|119954537|gb|ABM11542.1| amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium vanbaalenii PYR-1] Length = 332 Score = 176 bits (446), Expect = 5e-42, Method: Composition-based stats. Identities = 53/227 (23%), Positives = 94/227 (41%), Gaps = 10/227 (4%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 + +IK RG L G++ G F+ G+ GFDVD ++ IF PS+++Y L++ Sbjct: 89 VANIKARGRLIVGLDIGSNLFSFRDPITGEITGFDVDIAGEIARDIFGTPSQVEYRILSS 148 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 +R ALQ Q+D++ + T R+ + + Q + + I S LSG Sbjct: 149 ADRVEALQKNQVDVVVKTMTITCERKKLVNFSTA--YLSANQRILAPRDSNIRQSSDLSG 206 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 +CV GTT+ + + + A + + DA + D S L L Sbjct: 207 KRVCVAKGTTSLERIQQITP----PPIIVGVVTWADCLVALQQRQVDAVSTDDSILAGL- 261 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 + P H++ P +++ P + +T V+ T + Sbjct: 262 -VSQDPYLHIVGPS-MNEEPYGIGVNLENTGLVRFVNGTLQRIRRDG 306 >gi|317053830|ref|YP_004117855.1| family 3 extracellular solute-binding protein [Pantoea sp. At-9b] gi|316951825|gb|ADU71299.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b] Length = 274 Score = 176 bits (446), Expect = 5e-42, Method: Composition-based stats. Identities = 53/278 (19%), Positives = 106/278 (38%), Gaps = 19/278 (6%) Query: 3 KDFFVSILCLIILFFT-------SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 K +++ L + T + + S L + +RG L+ G F +G+ Sbjct: 7 KIIAGALVMLAVSGCTPTEEKKDAGAAPQSALQTVLQRGTLRVGDCLSFAPFGFYDKDGN 66 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G+DVD +AL+ + K++ + + R LQ+ ++D++ N L R +G Sbjct: 67 PDGYDVDLAKALAKEMG---VKLEMVNTTSANRIPNLQTNKVDVVFCNFTRNLERAKEIG 123 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + ++ K+ GI S ++G +I G+T D ++ + Sbjct: 124 F--TNPYVVASEAMLVRKESGIKSAHDMAGKTIATVKGSTN----GDEVRSMGIDVKIQE 177 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 ++ + A + + DA D + L P+ V ++ A + QGD Sbjct: 178 YDSSQAAILAVKQGQADAMIEDNNFLAYQAKL--DPTLTVTNEALVPLEYNAFGVKQGDQ 235 Query: 236 EWYNIVSWTHYAMVTAEELG-ITQKNINQVSKDTTNPD 272 W N ++ + + + E + QK + NP Sbjct: 236 VWLNYLNEFLFEINASGENATLYQKWFGDKPRYPLNPQ 273 >gi|322411346|gb|EFY02254.1| glutamine-binding protein precursor [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 266 Score = 176 bits (446), Expect = 6e-42, Method: Composition-based stats. Identities = 53/247 (21%), Positives = 107/247 (43%), Gaps = 12/247 (4%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFD 73 L S T ++L I K+G L+ G+ + F + ++G ++D + ++ A+ Sbjct: 20 LSQASELTTPNVLKQITKKGQLRIGVKQDVPNFGYYHPKHRQFEGMEIDIAKKIAKALDV 79 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 P Q+ + A+ R L ++Q+D++ T R+ AF Y D GF++ K Sbjct: 80 KP---QFTAVTAQTREALLDNQQLDMIIATYTITPERQKQ--YAFSNPYYLDEIGFLVKK 134 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 I+S+ +L+ +I V G+TT+ + +Y KAH++ + + E+ + A+R + Sbjct: 135 SDAITSIKELNQKTIGVAQGSTTKNAIEEYGKAHDLSFSFVQLGSYPELAISLYANRIAS 194 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 ++ D S L + IL + ++ A + + ++ Sbjct: 195 FSVDKSILSGYTNQ-----KTTILTEGFNQQAYGVATTKSNKALITHINKLLEQWQKDGS 249 Query: 254 L-GITQK 259 L I +K Sbjct: 250 LAKIYRK 256 >gi|227113607|ref|ZP_03827263.1| putative amino acid ABC transporter, substrate binding protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 268 Score = 176 bits (446), Expect = 6e-42, Method: Composition-based stats. Identities = 49/272 (18%), Positives = 100/272 (36%), Gaps = 13/272 (4%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K ++++ +L + S A L DI+KRG L+ + F V + +G+D+D Sbjct: 9 KKGLLAVMGAAMLLIQAGSAMADQLQDIEKRGVLRVAVPQDFPPFGSVGTDLQPQGYDID 68 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 R L+ + K+Q +P+ + R LQ+ ++D++ + RE + + Sbjct: 69 IARYLAKEM---KLKLQLVPVTSANRVPYLQTNKVDLVISSLGKNAEREKVIDFSRAYAP 125 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 +F G K ++S L G SI V G ++ L D +E Sbjct: 126 FF--LGVFGPKDSTLTSSEALEGKSIGVTRGAVEDMVLTDIAPKAA---QIKRYEDNNTT 180 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 +AY + + + + A+ P++ + ++ SP + + + V Sbjct: 181 LSAYLSGQVEYVATGNLVVAAIA--EQNPTKAPVAKFMLKDSPCYIGLKKDEPALKAKVD 238 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 + L + K ++ Sbjct: 239 ALIEQALKDNTLNTLS---EKWLKAPLPASIK 267 >gi|91782144|ref|YP_557350.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia xenovorans LB400] gi|296162005|ref|ZP_06844804.1| extracellular solute-binding protein family 3 [Burkholderia sp. Ch1-1] gi|91686098|gb|ABE29298.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia xenovorans LB400] gi|295887749|gb|EFG67568.1| extracellular solute-binding protein family 3 [Burkholderia sp. Ch1-1] Length = 267 Score = 175 bits (445), Expect = 6e-42, Method: Composition-based stats. Identities = 49/258 (18%), Positives = 96/258 (37%), Gaps = 11/258 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + + ++L +L T+ + +A L +I K G LK + F V A+ +G+D+ Sbjct: 10 RRAWLAALLLSPVLAITAPAAHADTLDNIAKAGVLKVAVPEDYPPFGSVGADMKPQGYDI 69 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D L+ ++ K++ +P+N+ R LQ+ ++D++ + T RE + + Sbjct: 70 DTAALLAKSM---NVKLELVPVNSANRIPYLQTGKVDLVISSLGKTPEREKVIDFSTAYA 126 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y+ QG +S + L+G ++ G E+ L +K FE Sbjct: 127 PYY--QGVFGPADIKVSGPADLTGKTVGATRGALEEIGLTQMAPNATIK----RFEDNNA 180 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 AA+ + + A+ P +I SP + + + V Sbjct: 181 TIAAFLSGQVQLIAAGNIVAAAILA--KNPPRRPEPKFVIKNSPCFVGMNKNEPRLQQKV 238 Query: 242 SWTHYAMVTAEELGITQK 259 + L K Sbjct: 239 NAAIAQAKQDGTLNTMSK 256 >gi|318604514|emb|CBY26012.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Yersinia enterocolitica subsp. palearctica Y11] Length = 263 Score = 175 bits (445), Expect = 7e-42, Method: Composition-based stats. Identities = 48/263 (18%), Positives = 106/263 (40%), Gaps = 12/263 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L +++ + + A L I++RG L+ + F V + +G+D Sbjct: 3 MKKRML-ALLGAVLILVQAPAVLADQLEKIQQRGVLRVAVPQDFPPFGSVGTDLQPQGYD 61 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D L+ + K+Q +P+ + R LQ+ ++D++ + RE ++ + Sbjct: 62 IDMAHYLADKM---KLKLQLVPVTSANRVPYLQTDKVDLVISSLGKNPEREKAIAFSRAY 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +F G K+ + QL+G ++ V G ++ L++ +E Sbjct: 119 APFF--LGVFGAKEDALKQPEQLAGKTVGVTRGAVEDMVLSELAPK---DAQIKRYEDNN 173 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +AY + + D + AL P++ + ++ SP + QG+ Sbjct: 174 TTLSAYLSGQVDYLATGNLVVSALARQ--NPAQAPVAKFMLKDSPCYIGLRQGEAALKAK 231 Query: 241 VSWTHYAMVTAEEL-GITQKNIN 262 V + + L G+++K + Sbjct: 232 VDALIVEALQDKTLNGLSEKWLK 254 >gi|153869943|ref|ZP_01999447.1| Lysine-arginine-ornithine-binding periplasmic protein [Beggiatoa sp. PS] gi|152073594|gb|EDN70556.1| Lysine-arginine-ornithine-binding periplasmic protein [Beggiatoa sp. PS] Length = 224 Score = 175 bits (445), Expect = 7e-42, Method: Composition-based stats. Identities = 75/206 (36%), Positives = 115/206 (55%), Gaps = 5/206 (2%) Query: 27 LGDIKKRGFLKCGINTGLVG----FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 + I+KR L CG+ + + G F + G GFDVDFCRA+++AI ++P+ + + Sbjct: 1 MDTIEKRTVLVCGVGSDVNGLKGGFTFINEKGQVAGFDVDFCRAVAAAILNNPNALSPVL 60 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + +R L +D+L+ T WT RE + G F IT++DGQGFI+ K I+++ Q Sbjct: 61 VRQSDRPGTLAPGNVDLLTATTTWTSTREANWG-NFTWITFYDGQGFIVKKDTSITTLEQ 119 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G +ICV GTTT L + F ++ + + F E AAY +C AYT D S L Sbjct: 120 LEGKNICVVEGTTTLANLKEVFAQRSISFTLLTFPEATEEFAAYEQEQCTAYTSDRSTLA 179 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAP 228 + +++ P HV + + ISK+PL P Sbjct: 180 SWIFSSNTPDAHVFIDETISKNPLRP 205 >gi|313115586|ref|ZP_07801045.1| bacterial extracellular solute-binding protein, family 3 [Faecalibacterium cf. prausnitzii KLE1255] gi|310622101|gb|EFQ05597.1| bacterial extracellular solute-binding protein, family 3 [Faecalibacterium cf. prausnitzii KLE1255] Length = 282 Score = 175 bits (445), Expect = 7e-42, Method: Composition-based stats. Identities = 56/264 (21%), Positives = 99/264 (37%), Gaps = 15/264 (5%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L IK+ G + G+ + F V NG+++G+DV F R L + + I ++ A Sbjct: 5 TLDQIKESGTINIGVFSDKNPFGYVDENGEYQGYDVYFARRLGEDLGVE---INFVSTEA 61 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS- 144 R LQ+ + D++ N T R + A G I I+++ + Sbjct: 62 ANRIEYLQTGKADVILANFTVTPERAEEVDFAL--PYMNVALGVISPDSNVITTLDNWNA 119 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 + V +GTT E Y ++ A A+ D + + A Sbjct: 120 DDQMIVISGTTAET----YLTKEYPDIPLQKYDSYATAKNALENGNGVAWANDNTEVIAF 175 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 N V +P + S+ +APA+ QG+T ++ W + + E K+ + Sbjct: 176 AKQNT--GYTVGIPSLGSQDTIAPAVSQGNTT---VLDWLNEEIKALGEENFFHKDYEET 230 Query: 265 SKDTTNPDVQRFLGIDKSSNIGEA 288 DT D + L ++ G Sbjct: 231 LVDTYGLDYEDELVVEGGVTGGAD 254 >gi|312141243|ref|YP_004008579.1| high affinity substrate binding lipoprotein [Rhodococcus equi 103S] gi|311890582|emb|CBH49900.1| putative high affinity substrate binding lipoprotein [Rhodococcus equi 103S] Length = 327 Score = 175 bits (444), Expect = 8e-42, Method: Composition-based stats. Identities = 51/251 (20%), Positives = 101/251 (40%), Gaps = 13/251 (5%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDD 74 F +++ L I++RG L G++TG + + +GFDVD R ++ + Sbjct: 73 FPAGQIPDSASLDAIRQRGRLVVGLDTGSNLLSFRNPTTDEIEGFDVDIAREIARDLLGS 132 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 P K+++ LN ER AL+ ++DI+++ T R + + Y Q ++ Sbjct: 133 PDKVEFRVLNYAEREQALEDGRVDIVAKTMAITCERRQRIDF--STVYYDAHQRILVMAG 190 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 + VS L+G +CV GTT+ + + P+ + + ++ DA Sbjct: 191 SPVRDVSDLAGRRVCVGEGTTSLERIERQQPDAAVVTVPM----WSDCLVMLQQNQVDAI 246 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 + D + L L + I+ + + QG+ + V+ T + Sbjct: 247 STDDTLLLGLATQDPHS---RIVGPNMGDERYGIGVAQGNEDLVRFVNGTLERIRR---D 300 Query: 255 GITQKNINQVS 265 G +K ++ Sbjct: 301 GTWEKIYDRWL 311 >gi|170749962|ref|YP_001756222.1| extracellular solute-binding protein [Methylobacterium radiotolerans JCM 2831] gi|170656484|gb|ACB25539.1| extracellular solute-binding protein family 3 [Methylobacterium radiotolerans JCM 2831] Length = 301 Score = 175 bits (444), Expect = 9e-42, Method: Composition-based stats. Identities = 42/252 (16%), Positives = 86/252 (34%), Gaps = 10/252 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQY 80 L I L G+ F+ + N GF VD C ++ A+ + ++ Sbjct: 24 GTLKKIHDNNRLVLGVRDTATPFSYLDQNQKVVGFAVDICLRIADAVKRELKMPGLEVGM 83 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +N+ R + + +D+ T R+ + + F+ K + I+ + Sbjct: 84 EFVNSSSRIPLMTNGTVDLECGTTTNNAERKKQVDF--TNTHFLTATRFVSRKDQHIAGL 141 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L G ++ AG+T L L + I + V E R A+ D Sbjct: 142 DDLRGKTVSSVAGSTNILMLIKANNERKLGITVIAAKDVPEGFLMVETGRAAAFVMDDVQ 201 Query: 201 LYALKLTNDRPSEHVILPDIIS-KSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L + + P+ +V+ + +S P + + D + +V + + E+ Sbjct: 202 LSVIAAQSKEPAAYVVSEETLSNPEPYGIMLRKDDPAFKAVVDRATADLYRSPEI---TA 258 Query: 260 NINQVSKDTTNP 271 ++ P Sbjct: 259 LYDRWFLRPVPP 270 >gi|229593270|ref|YP_002875389.1| putative ABC transporter substrate-binding protein [Pseudomonas fluorescens SBW25] gi|229365136|emb|CAY53374.1| putative ABC transport system, substrate-binding protein [Pseudomonas fluorescens SBW25] Length = 261 Score = 175 bits (444), Expect = 9e-42, Method: Composition-based stats. Identities = 57/274 (20%), Positives = 99/274 (36%), Gaps = 14/274 (5%) Query: 1 MYKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + + L L + A+ L DI RG LK + F V + +G Sbjct: 1 MTKRYSALLTALFASLMLSQAPAQANGLDDIVARGTLKVAVPQDFPPFGSVGPDMKPRGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D + L+ + K++ P+N+ R L + ++D++ + RE + + Sbjct: 61 DIDTAKLLADQL---KVKLELTPVNSTNRIPFLTTGKVDLVISSLGKNPEREKVIDFSKA 117 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 ++ ISSV L G +I V G ++ L FE Sbjct: 118 YAPFY--LAVFGPPDAAISSVDDLKGKTISVTRGAIEDIELTAVAPKEA---TIKRFEDN 172 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AAY A + D + A+ + P L + SP+ + + + Sbjct: 173 NSTIAAYLAGQVDLIASGNVVMVAI--SERNPKRVPALKVKLKDSPVYVGVNKNEPALLE 230 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 V+ A A+ G +KN Q K+ D+ Sbjct: 231 KVNQILVA---AKADGSLEKNAMQWLKEPLPADL 261 >gi|256750908|ref|ZP_05491792.1| extracellular solute-binding protein family 3 [Thermoanaerobacter ethanolicus CCSD1] gi|256750243|gb|EEU63263.1| extracellular solute-binding protein family 3 [Thermoanaerobacter ethanolicus CCSD1] Length = 260 Score = 175 bits (444), Expect = 9e-42, Method: Composition-based stats. Identities = 60/276 (21%), Positives = 108/276 (39%), Gaps = 26/276 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGD- 55 M K + +L + I+ S A+ L IK++G + G + F K G+ Sbjct: 1 MNKKPLLLLLTMTIVLSLFLSACGNEPANTLDKIKQKGVIVMGTSADFPPFEFHKVEGNK 60 Query: 56 --WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 GFD+D A++ + K++ ++ K ALQ+ +ID++ T + + Sbjct: 61 DTIVGFDIDIANAIAKKLG---VKLEIKDMDFKGLIPALQAGRIDMIVAGMTPTP--DRA 115 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F I Y Q ++ I L G ++ VQ GTT+E + Sbjct: 116 ENVDFSDIYYNSQQVVVVKNDSPILKFDDLKGKTVAVQIGTTSEEA-----AKKIPDVNL 170 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP-DIISKSP--LAPAI 230 RV + + RCDA + + A + IL I+ +A A+ Sbjct: 171 KQLNRVGDAFMDLKNGRCDAIVLEDTVANAY---LKEYKDMKILSMKEINTEEGGMAVAV 227 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 +G+ E NI++ + T+ E K +++ K Sbjct: 228 AKGNKELVNIINEVIKELKTSGE---YDKLVDKWFK 260 >gi|253689675|ref|YP_003018865.1| extracellular solute-binding protein family 3 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251756253|gb|ACT14329.1| extracellular solute-binding protein family 3 [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 268 Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats. Identities = 47/240 (19%), Positives = 94/240 (39%), Gaps = 10/240 (4%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K ++++ +L + S A L DI+KRG L+ + F V + +G+D+D Sbjct: 9 KKGLLAVMGAAMLLVQAGSAMADQLQDIEKRGVLRVAVPQDFPPFGSVGTDLQPQGYDID 68 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 R L+ + K+Q +P+ + R LQ+ ++D++ + RE + + Sbjct: 69 IARYLAKEM---KLKLQLVPVTSANRVPYLQTNKVDLVISSLGKNAEREKVIDFSRAYAP 125 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 +F G K ++S L G SI V G ++ L D +E Sbjct: 126 FF--LGVFGPKDSTLTSSDALEGKSIGVTRGAVEDMVLTDIAPKAA---QIKRYEDNNTT 180 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 +AY + + + + A+ P++ + ++ SP + + + V Sbjct: 181 LSAYLSGQVEYVATGNLVVAAIA--EQNPTKAPVAKFMLKDSPCYIGLKKDEPALKAKVD 238 >gi|15891686|ref|NP_357358.1| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|15160140|gb|AAK90143.1| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 300 Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats. Identities = 44/263 (16%), Positives = 102/263 (38%), Gaps = 10/263 (3%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 + S + L I + G ++ G + F+ + + G+ ++ C ++ +I Sbjct: 18 VAAASDNAQPPTLETIARTGTIRLGFADRNIPFSYLGTGPEPIGYSIELCLRVADSIKRK 77 Query: 75 ----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130 K++++ R + L ID+ + T R ++ ++ + G ++ Sbjct: 78 LALPELKVEFVKRTPSNRIMLLNDGTIDMECVASTNTEERRKAVWFSYS--HFITGTRYV 135 Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190 K G+++V+ L+G ++ V GT L + M + + E +R Sbjct: 136 ALKSSGLNTVADLAGRTVVVTTGTINISQLNVLNRKLGMNIAVLQNDSTEGSFDMVTENR 195 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIIS-KSPLAPAIIQGDTEWYNIVSWTHYAMV 249 A+ D L + RP ++VI + ++ P + GDT + + V+ + Sbjct: 196 ASAFVMDDILLRSFIAETGRPEDYVISNEYLAPPQPYGLMLRHGDTGFRDAVNEALGQIY 255 Query: 250 TAEELGITQKNINQVSKDTTNPD 272 + E+ +K ++ P+ Sbjct: 256 QSGEI---EKIYDKWFNAPIPPN 275 >gi|154148664|ref|YP_001406796.1| amino acid [Campylobacter hominis ATCC BAA-381] gi|153804673|gb|ABS51680.1| amino acid [Campylobacter hominis ATCC BAA-381] Length = 268 Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats. Identities = 55/264 (20%), Positives = 106/264 (40%), Gaps = 22/264 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V +C LF L IK++G + G+ F + +G ++GF+ Sbjct: 1 MKKIILVLGICFCALF-------GDSLDQIKQKGVFRVGVYESQPPFEKF-VDGKFEGFE 52 Query: 61 VDFCRALSSAIFDD-PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 +D +++ +F + ++++ + AK+R ALQ +ID + N T R S+ Sbjct: 53 IDLANSIAKDLFGENGGTVEFVIITAKDRIPALQQNKIDAVIANYTVTDERAKSVDFTM- 111 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G + K I+S +L I + GTTTE L + Sbjct: 112 -PYFAVNTGILTRKNDNITSPLELRDTPIICEKGTTTEEYLQKN------DFKIEYCNSA 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E R + AY D + A + + S V + ++ + LA + +G+ + Sbjct: 165 VECYKMVRDGKAKAYAADNIVVLAYPVLDR--SVEVSIKNLGTTDFLAIGVQKGNKTLLD 222 Query: 240 IVSWTHYAMVTAEELGITQKNINQ 263 ++ ++ + G +K+ N+ Sbjct: 223 FIND---ELIKLSKEGFFKKSFNE 243 >gi|295692447|ref|YP_003601057.1| glutamine ABC transporter, glutamine-binding protein [Lactobacillus crispatus ST1] gi|295030553|emb|CBL50032.1| Glutamine ABC transporter, glutamine-binding protein [Lactobacillus crispatus ST1] Length = 272 Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats. Identities = 40/265 (15%), Positives = 94/265 (35%), Gaps = 13/265 (4%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIF 72 L ++++ +K+ + G+ F G +GF++D +AL+ + Sbjct: 19 TLTACGQHASSNVYQKVKESKTIVWGVRADTRLFGLTNIKTGHIEGFEIDLAKALTKQML 78 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 +K ++ A R L++ +D + T R + + G ++ Sbjct: 79 GKDAKTDFVTTTANTRIPLLKNGNVDAVLATMTITPERAKQVTF--SKPYFPAGSSLLVP 136 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 I +V L G ++ GTT + Y + ++ + +A +A++ Sbjct: 137 NNSKIKNVKDLEGKTVLAVKGTTAVDDVHKYAPKA----RILQYDDYGQAMSALKANQGV 192 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 A T D L + N + ++ + S +P A+ +G + + + + Sbjct: 193 ALTTDNGLLAGIAQENPG---YKLVGGVYSNAPYGIAVNKGQKQMADHIDQALN---ELQ 246 Query: 253 ELGITQKNINQVSKDTTNPDVQRFL 277 + G + I + ++ L Sbjct: 247 KNGTYDRLIKKWFAGIPGFSLKGVL 271 >gi|325673926|ref|ZP_08153616.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Rhodococcus equi ATCC 33707] gi|325555191|gb|EGD24863.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Rhodococcus equi ATCC 33707] Length = 327 Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats. Identities = 51/251 (20%), Positives = 101/251 (40%), Gaps = 13/251 (5%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDD 74 F +++ L I++RG L G++TG + + +GFDVD R ++ + Sbjct: 73 FPAGQIPDSASLDAIRQRGRLVVGLDTGSNLLSFRNPTTDEIEGFDVDIAREIARDLLGS 132 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 P K+++ LN ER AL+ ++DI+++ T R + + Y Q ++ Sbjct: 133 PDKVEFRVLNYAEREQALEDGRVDIVAKTMAITCERRQRIDF--STVYYDAHQRILVMAG 190 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 + VS L+G +CV GTT+ + + P+ + + ++ DA Sbjct: 191 SPVRDVSDLAGRRVCVGEGTTSLERVERQQPDAAVVTVPM----WSDCLVMLQQNQVDAI 246 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 + D + L L + I+ + + QG+ + V+ T + Sbjct: 247 STDDTLLLGLATQDPHS---RIVGPNMGDERYGIGVAQGNEDLVRFVNGTLERIRR---D 300 Query: 255 GITQKNINQVS 265 G +K ++ Sbjct: 301 GTWEKIYDRWL 311 >gi|302671821|ref|YP_003831781.1| amino acid ABC transporter substrate-binding protein [Butyrivibrio proteoclasticus B316] gi|302396294|gb|ADL35199.1| amino acid ABC transporter substrate-binding protein [Butyrivibrio proteoclasticus B316] Length = 303 Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats. Identities = 59/314 (18%), Positives = 106/314 (33%), Gaps = 45/314 (14%) Query: 1 MYKDFFV---SILCLIILFFTSFSTNAS---------------------------ILGDI 30 M K+ F ++ L S + S L +I Sbjct: 1 MKKNLFTKSAGVITAATLVGASITGCGSSVSTASASDAQAQAETAEAPASSEVYRTLDEI 60 Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K+ G + G+ + F V NG++ G+DV F + + KI Y+ A R Sbjct: 61 KESGTINIGVFSDKSPFGYVDENGEYAGYDVYFAERIGQDLG---VKINYVSTEAANRIE 117 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASIC 149 LQ+ ++DI+ N T R + A G + I S+ + + I Sbjct: 118 YLQTGKVDIILANFTVTEERAQEVDFAL--PYMNVALGVVSPSDAVIDSLDNVGADDEII 175 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V +GTT E Y + + ++ E A + D + + A + N+ Sbjct: 176 VISGTTAET----YLEKNYPDIKLQKYDAYAEAKTAIENGNAAGWANDNTEVIAFAIENE 231 Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 V +P + +APA+ +G+ +W + + E + DT Sbjct: 232 --GFTVGVPSLGDSDTIAPAVTKGNETLL---NWLNDEIKAIGEENFFHADYEATLLDTY 286 Query: 270 NPDVQRFLGIDKSS 283 D + L ++ Sbjct: 287 GADYEDTLVVEGGK 300 >gi|221069888|ref|ZP_03545993.1| extracellular solute-binding protein family 3 [Comamonas testosteroni KF-1] gi|220714911|gb|EED70279.1| extracellular solute-binding protein family 3 [Comamonas testosteroni KF-1] Length = 320 Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats. Identities = 56/318 (17%), Positives = 107/318 (33%), Gaps = 32/318 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA----------------------SILGDIKKRGFLKC 38 M K + L ++ S L + G + Sbjct: 1 MGKSLKWAGLAAALVCAGSAMAAGKTEAASSTIGANIDTAVELSASPTLQRWQAGGTVVL 60 Query: 39 GINTGLVGFAE-VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97 G+ V + + AN + G+ +D C + AI ++++Y+ L + + + Sbjct: 61 GVREAAVPMSYAIGANEKFVGYHMDLCERVVHAI-APRAQLRYMVLTPQNTMPLINNGTA 119 Query: 98 DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157 D + L R+ + TY + GI+S QL G ++ GTT Sbjct: 120 DFNCASMTNNLTRQKQVAFGL--TTYVSEVRMAVRADSGITSFKQLQGRNVGAITGTTAV 177 Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 L Y + + + ++ + E + R DA+ D + L + + P + I+ Sbjct: 178 QILRKYASDNELNFKTLMSKDQLESFLMLESGRVDAFVLDDNMLAGVIGQSKNPKGYKIV 237 Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP-DVQRF 276 ++I P+A + D + V M+ + EL K N+ P V Sbjct: 238 GEVIGAEPIAIQFSKNDPQIKKAVDGAILQMIRSGEL---HKLYNKWFMQPIAPKSVN-- 292 Query: 277 LGIDKSSNIGEALGLTKD 294 L + + + L D Sbjct: 293 LNLPMGEVLKKQLAAPND 310 >gi|256843605|ref|ZP_05549093.1| glutamine ABC transporter substrate-binding protein [Lactobacillus crispatus 125-2-CHN] gi|312984334|ref|ZP_07791676.1| CjaA protein [Lactobacillus crispatus CTV-05] gi|256615025|gb|EEU20226.1| glutamine ABC transporter substrate-binding protein [Lactobacillus crispatus 125-2-CHN] gi|310894259|gb|EFQ43339.1| CjaA protein [Lactobacillus crispatus CTV-05] Length = 288 Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats. Identities = 63/290 (21%), Positives = 110/290 (37%), Gaps = 33/290 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGD----------IKKRGFLKCGINTGLVGFAEV 50 M F V +L + + N + D IK+RG+L+ + L + V Sbjct: 10 MAILFVVVVLVAGYIGISRPGINGTASEDRWNSENNVSSIKRRGYLRIAVFGDLPPYGWV 69 Query: 51 KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 + G G+DV R ++ + P +++ +NA R L S + DI+ N T R Sbjct: 70 NSQGKRVGYDVRLARRVAKDLGVKP---KFIQVNANNRIDTLNSNKADIVLANFTLTPER 126 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 + ++ G I K +++ QL G S+ V GTT E +YF Sbjct: 127 KSVA--SWTKPYMKVSVGVISPKSAPVTNAKQLKGKSVIVTKGTTAE----NYFTKQK-G 179 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 + + F+ + A + R A D S LYA P V + I ++ A+ Sbjct: 180 VNLLKFDSKTQQFNAIKNGRGAALADDNSYLYAWVKR--NPKFTVGIKTIGPNQYISGAV 237 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGID 280 +G + + + E IT+ N N +++ + G + Sbjct: 238 KKG--------NKSLQKWMDRE---ITKLNRESFFTYDYNKELKPYFGKE 276 >gi|315038756|ref|YP_004032324.1| amino acid ABC transporter periplasmic protein [Lactobacillus amylovorus GRL 1112] gi|312276889|gb|ADQ59529.1| amino acid ABC transporter periplasmic protein [Lactobacillus amylovorus GRL 1112] Length = 286 Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats. Identities = 59/241 (24%), Positives = 101/241 (41%), Gaps = 15/241 (6%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 +N + + IK+RG+++ G+ L + V + G GFD+ R L+ + P ++ Sbjct: 42 SNNNSVTQIKRRGYIRIGVYGDLPPYGWVNSQGKRVGFDLRLARELAKELGVKP---RFT 98 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 LN R AL S ++D++ N T R + A G + K I+S Sbjct: 99 QLNGNNRVDALNSDKVDMVLANFTKTPERAEVVDFAH--PYMKVSTGVVSPKSHPITSEK 156 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 QL G + + G+T E +YF A + F+ + A + R A D S L Sbjct: 157 QLRGKQLILLKGSTGE----NYF-AKRPGIKLLRFDSETQQFNAMKNKRGAALADDNSYL 211 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 YA P V + I +APA+ +G+ +++ WT+ + G +K+ Sbjct: 212 YAWIK--KNPQYVVGIRSIGPHQFIAPAVKKGN---KSLLKWTNKQINRLTAEGFFKKDY 266 Query: 262 N 262 Sbjct: 267 Q 267 >gi|220920915|ref|YP_002496216.1| family 3 extracellular solute-binding protein [Methylobacterium nodulans ORS 2060] gi|219945521|gb|ACL55913.1| extracellular solute-binding protein family 3 [Methylobacterium nodulans ORS 2060] Length = 267 Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats. Identities = 55/281 (19%), Positives = 105/281 (37%), Gaps = 17/281 (6%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFD 60 K +S++ L L + S A L DIKKRG L C F+ G+D Sbjct: 1 MKTLTLSLVAL--LSLGAVSARADQLDDIKKRGTLVCATLGTTEPFSFQDLTTRQTAGYD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDFC+A++ A+ K++ + + R L ++D+++ N +T R + + + Sbjct: 59 VDFCKAIADALG---VKLELKLVAVEARIPELSQGRVDVVAANLGYTPER--AEQIDYSD 113 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y Q + +G + S L G + G+T+EL + + + + F+ Sbjct: 114 FYYVSQQKLLARDAEGFKAASDLGGKRVSAIKGSTSELAVKNSIPSAQT----VTFQDAP 169 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A + + A+ L + IL + + P + +G+ Sbjct: 170 AAFLAMQQRKVAAFAASEIMLVKFRSQAGT--GLEILEPSLMREPWGIGVRKGEKSLLAA 227 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDK 281 V+ A++ E G + + + R I+ Sbjct: 228 VN---KALLDLEASGKAAAIFTKWLGADSPYHLTREFKIEP 265 >gi|317401748|gb|EFV82367.1| extracellular solute-binding protein family 3 [Achromobacter xylosoxidans C54] Length = 260 Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats. Identities = 49/287 (17%), Positives = 102/287 (35%), Gaps = 29/287 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + LC + T+A L DI KRG LK + F V A+ G+D Sbjct: 1 MNRRTLLLSLCTAATLLAAPLTHADTLDDIVKRGTLKVAVPQDFPPFGSVGADMKPLGYD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D ++ + K++ +P+ + R LQ++++D++ + RE ++ + Sbjct: 61 IDTAALIAKQLG---VKLELVPVTSANRVPYLQTRKVDLVISSLGKNPEREKAIDFSDAY 117 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +F+G ++S + L+G +I V G ++ L +E Sbjct: 118 APFFNG--VFGPADVKVASAADLAGKTIGVTRGAVEDIELTKIAP---PTATLKRYEDNN 172 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTND--RPSEHVILPDIISKSPLAPAIIQGDTEWY 238 A+ + + A+ N +P ++ D SP + + + + Sbjct: 173 GTITAFLSGQVPLIATGNVVAAAILARNPPKKPETKFLIKD----SPCYIGLNKDEPKLR 228 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNI 285 V+ L +++LG D ++ Sbjct: 229 AKVNEILANAKRDGSLTAIS---------------RKWLGADLPKDL 260 >gi|228476953|ref|ZP_04061593.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus salivarius SK126] gi|228251372|gb|EEK10533.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus salivarius SK126] Length = 224 Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats. Identities = 56/215 (26%), Positives = 97/215 (45%), Gaps = 15/215 (6%) Query: 6 FVSILCLIILFFTSFSTNAS---------ILGDIKKRGFLKCGINTGLVGFAEVKANGD- 55 S+ L I TS T A + I KRG L G+ + F A + Sbjct: 12 VASLAILTIFLITSHKTKAEDTSKLLDSKAVQKIVKRGTLNVGVKQDVPNFGYYSAKTNT 71 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 ++G +VD + ++ + K+ Y+P+ + R + + ID+L R+ S Sbjct: 72 YEGMEVDLAKKIADEL---KVKVNYIPVTTQTREPLMDNGTIDLLIATYTINDERKAS-- 126 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 A Y+D GF++ K GI+ +S L+G +I V G +T+ L +Y A+N+K++ + Sbjct: 127 YAISTPYYYDQIGFLVLKDSGINKISDLNGKTIGVSQGASTKAALQEYASANNLKFNYVQ 186 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 E+ + AHR DA++ D S L + + Sbjct: 187 LGSFPELAVSLYAHRVDAFSVDKSILSGYESKKTK 221 >gi|253701872|ref|YP_003023061.1| extracellular solute-binding protein family 3 [Geobacter sp. M21] gi|251776722|gb|ACT19303.1| extracellular solute-binding protein family 3 [Geobacter sp. M21] Length = 264 Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats. Identities = 62/273 (22%), Positives = 101/273 (36%), Gaps = 15/273 (5%) Query: 1 MYKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K +S L ++ L ++F+ + S +KK G L G++ G+ GF Sbjct: 1 MKKILAILSSLLVLTLAVSAFAADGS-FKRVKKEGTLTIGLDDAFPPMGYRNDKGELIGF 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D + + KI++ P AL SK+ D + T R +AF Sbjct: 60 DIDAAEEVGKRLG---IKIKWQPTAWDGVMHALNSKKFDCIWNGMTITDER--KKEVAFT 114 Query: 120 PITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 DGQ ++ +K ++ L GA + VQ G++ + + +E Sbjct: 115 KPYKMDGQVAVVRFGEKKFKKLADLKGARVGVQKGSSAVEAVKKLPA---VPAGVREYED 171 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + + R D D + RP + I+P I+K P A + D E Sbjct: 172 NPKALLDLESKRLDTVVIDDAT--GRDFIAKRPGKFQIIPGNITKEPFGVAFRKEDVELR 229 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 V T MV + K +D TNP Sbjct: 230 EAVQKTLDKMVKDGTMAKISK--KWFGEDITNP 260 >gi|163789690|ref|ZP_02184127.1| glutamine ABC transporter (glutamine-binding protein) [Carnobacterium sp. AT7] gi|159874912|gb|EDP68979.1| glutamine ABC transporter (glutamine-binding protein) [Carnobacterium sp. AT7] Length = 266 Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats. Identities = 46/255 (18%), Positives = 99/255 (38%), Gaps = 12/255 (4%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIF 72 + + I I++ + G+ F +G+ +GFD+D +A++ I Sbjct: 21 AACGSQSAATVDITERIEENPTITWGVKVDTNLFGLYDIKSGEIRGFDIDIAKAITEEIT 80 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 D + +++ + +K R L++ ID + T R+ + I + GQ ++ Sbjct: 81 GDEANAEFVEVTSKTRIPLLKNGNIDAIIATMTITEERKEQVNF--SDIYFDAGQALLVP 138 Query: 133 KKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191 I S+ L + ++ G+T+ + + N + E E A ++ + Sbjct: 139 NDSSIQSLEDLSADTTVLAVKGSTSAQNIRELSPDTN----VLELENYSEAFTALQSGQG 194 Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 DA T D + L + D P + + ++ P AI +G ++ V+ + + Sbjct: 195 DAVTTDNAILLGIIA--DNPG-YRLAGGNFTQEPYGIAINKGQDDFLTEVNEALTTLKSN 251 Query: 252 EELG-ITQKNINQVS 265 I K I ++ Sbjct: 252 GVYDEIYAKWIPEMK 266 >gi|293380805|ref|ZP_06626846.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus crispatus 214-1] gi|290922629|gb|EFD99590.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus crispatus 214-1] Length = 283 Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats. Identities = 63/290 (21%), Positives = 110/290 (37%), Gaps = 33/290 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGD----------IKKRGFLKCGINTGLVGFAEV 50 M F V +L + + N + D IK+RG+L+ + L + V Sbjct: 10 MAILFVVVVLVAGYIGISRPGINGTASEDRWNSENNVSSIKRRGYLRIAVFGDLPPYGWV 69 Query: 51 KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 + G G+DV R ++ + P +++ +NA R L S + DI+ N T R Sbjct: 70 NSQGKRVGYDVRLARRVAKDLGVKP---KFIQVNANNRIDTLNSNKADIVLANFTLTPER 126 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 + ++ G I K +++ QL G S+ V GTT E +YF Sbjct: 127 KSVA--SWTKPYMKVSVGVISPKSAPVTNAKQLKGKSVIVTKGTTAE----NYFTKQK-G 179 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 + + F+ + A + R A D S LYA P V + I ++ A+ Sbjct: 180 VNLLKFDSKTQQFNAIKNGRGAALADDNSYLYAWVKR--NPKFTVGIKTIGPNQYISGAV 237 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGID 280 +G + + + E IT+ N N +++ + G + Sbjct: 238 KKG--------NKSLQKWMDRE---ITKLNRESFFTYDYNKELKPYFGKE 276 >gi|160935367|ref|ZP_02082749.1| hypothetical protein CLOBOL_00262 [Clostridium bolteae ATCC BAA-613] gi|158441725|gb|EDP19425.1| hypothetical protein CLOBOL_00262 [Clostridium bolteae ATCC BAA-613] Length = 278 Score = 174 bits (442), Expect = 2e-41, Method: Composition-based stats. Identities = 51/255 (20%), Positives = 97/255 (38%), Gaps = 12/255 (4%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 ST L + K + G F +G G+DVD L+ ++ + + Sbjct: 34 GNSTQTGTLQKVLKERKMTVGCILSFPPFGYKSEDGTPMGYDVDMIHELADSLGVE---V 90 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + + + A R +L++ ++D + N TL R + G+ ++ K GI+ Sbjct: 91 EIVEVTADARIPSLETGKVDAVFGNFTRTLERAQKIDF--SNPYVVAGERLLVKKGSGIN 148 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 +V L+G + V G+T A+ N + FE + A + +C + D Sbjct: 149 TVDDLTGKKVAVTKGSTN----AELMATLNPNAEVVFFETSADALQAVKNGQCATFLEDS 204 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS-WTHYAMVTAEELGIT 257 + ND V+ +IS A + +GD +W N ++ + V+ + + Sbjct: 205 NFQQYQAAQND--DLEVVGDSLISLEYNAIGVKKGDQDWLNYLNLFIFNTNVSGKNDEMY 262 Query: 258 QKNINQVSKDTTNPD 272 K + NP Sbjct: 263 SKWFGEPMPFDLNPQ 277 >gi|271501781|ref|YP_003334807.1| family 3 extracellular solute-binding protein [Dickeya dadantii Ech586] gi|270345336|gb|ACZ78101.1| extracellular solute-binding protein family 3 [Dickeya dadantii Ech586] Length = 263 Score = 174 bits (442), Expect = 2e-41, Method: Composition-based stats. Identities = 47/260 (18%), Positives = 101/260 (38%), Gaps = 11/260 (4%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 ++++ +L + A L DI+KRG L+ + F V + +G+D+D Sbjct: 5 KRVLAVVGAALLMVQAGQAMADQLQDIQKRGVLRVAVPQDFPPFGSVGTDLQPQGYDIDM 64 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 R L+S + K+Q +P+++ R LQ+ ++D++ + RE + + + Sbjct: 65 ARYLASEM---KLKLQLVPVSSANRVPYLQTDKVDLVISSLGKNAEREKVIDFSSAYAPF 121 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 F G K ++S L G ++ V G ++ L D +E Sbjct: 122 F--LGVFGPKDTTVTSPDALQGKTVGVTRGAVEDMVLTDIAPK---TADIKRYEDNNTTL 176 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 +AY + + + A+ P + + ++ SP + + + V+ Sbjct: 177 SAYMSGQVQYIATGNLVVAAIA--EKNPEKAPVAKFMLKDSPCYIGLKKDEPALKAKVNE 234 Query: 244 THYAMVTAEEL-GITQKNIN 262 + L G+++K + Sbjct: 235 LIEKALKDNTLNGLSEKWLK 254 >gi|326318774|ref|YP_004236446.1| family 3 extracellular solute-binding protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375610|gb|ADX47879.1| extracellular solute-binding protein family 3 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 296 Score = 174 bits (442), Expect = 2e-41, Method: Composition-based stats. Identities = 47/272 (17%), Positives = 95/272 (34%), Gaps = 9/272 (3%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 L + + +++A +L I G L FA A G G+ V+ C+ ++ Sbjct: 9 TLLGVASLCCAVASHAGVLDRIASGGKLVVAYRDAASPFAFKDAGGRPAGYAVELCQRIA 68 Query: 69 SAI----FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 A+ ++ YLP++ R A+ + D+ +T R +AF + Sbjct: 69 DAVRRKTGRKDMEVAYLPVDLDNRMEAITQGRADLECGSTTNNAERRQ--IVAFTIPHFI 126 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 G ++ I + + G + GTT + + ++ + I + Sbjct: 127 TGTRLLVKASSPIDRIEDMGGHKLVSTRGTTALRAVQQLNRERALQINVIEAPDDQRAVD 186 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 DA+ D LYA P ++ ++ LA + +GD E+ +V Sbjct: 187 MVEKGEADAFAMDDVLLYAFAAGRPDPKALKVVGKFVTAEALAIMLPKGDPEFKKVVDDE 246 Query: 245 HYAMVTAEELGITQKNINQVSKDTTNPDVQRF 276 ++T E+ ++ P + Sbjct: 247 MRRLITTREI---HPIYDKWFLQPVPPTNRAL 275 >gi|328956871|ref|YP_004374257.1| glutamine-binding periplasmic protein [Carnobacterium sp. 17-4] gi|328673195|gb|AEB29241.1| glutamine-binding periplasmic protein [Carnobacterium sp. 17-4] Length = 266 Score = 174 bits (442), Expect = 2e-41, Method: Composition-based stats. Identities = 47/257 (18%), Positives = 100/257 (38%), Gaps = 14/257 (5%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALS 68 +C + + + I I++ + G+ F + + KGFD+D +A++ Sbjct: 17 VCFLAACGSKSAAKVDIAERIEENPTITWGVKVDTNLFGLYDIQSSEIKGFDIDIAKAIT 76 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 + D +++ + +K R L++ ID + T R+ + I + GQ Sbjct: 77 EELTGDADNAEFVEVTSKTRIPLLKNGNIDAIIATMTITEERKEQVNF--TDIYFDAGQA 134 Query: 129 FIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 ++ I S+ L + ++ G+T+ + + N + E E A + Sbjct: 135 LLVPNDSSIQSLDDLTADTTVLAVKGSTSAQNIRELSPEAN----VLELENYSEAFTALQ 190 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 + + DA T D + L + D P + + ++ P AI +G + N V+ A Sbjct: 191 SGQGDAVTTDNAILLGIIA--DNPG-YRLAGGNFTQEPYGIAINKGQDAFLNEVN---EA 244 Query: 248 MVTAEELGITQKNINQV 264 + T + G+ + Sbjct: 245 LETIKANGVYDAIYAKW 261 >gi|227877752|ref|ZP_03995786.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus crispatus JV-V01] gi|256850081|ref|ZP_05555511.1| glutamine ABC transporter substrate-binding protein [Lactobacillus crispatus MV-1A-US] gi|262047369|ref|ZP_06020326.1| glutamine ABC transporter substrate-binding protein [Lactobacillus crispatus MV-3A-US] gi|227862655|gb|EEJ70140.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus crispatus JV-V01] gi|256713053|gb|EEU28044.1| glutamine ABC transporter substrate-binding protein [Lactobacillus crispatus MV-1A-US] gi|260572343|gb|EEX28906.1| glutamine ABC transporter substrate-binding protein [Lactobacillus crispatus MV-3A-US] Length = 290 Score = 174 bits (442), Expect = 2e-41, Method: Composition-based stats. Identities = 61/290 (21%), Positives = 111/290 (38%), Gaps = 33/290 (11%) Query: 1 MYKDFFVSILCLIILFFT----SFSTNASI------LGDIKKRGFLKCGINTGLVGFAEV 50 M F V +L + + + + + + IK+RG+L+ + L + V Sbjct: 12 MAILFVVVVLVAGYIGISRPGINGTASGDRWNSENNVSSIKRRGYLRIAVFGDLPPYGWV 71 Query: 51 KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 + G G+DV R ++ + P +++ +NA R L S + DI+ N T R Sbjct: 72 NSQGKRVGYDVRLARRVAKDLGVKP---KFIQVNANNRIDTLNSNKADIVLANFTLTPER 128 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 + ++ G I K +++ QL G S+ V GTT E +YF Sbjct: 129 KSVA--SWTKPYMKVSVGVISPKSAPVTNAKQLKGKSVIVTKGTTAE----NYFTKQK-G 181 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 + + F+ + A + R A D S LYA P V + I ++ A+ Sbjct: 182 VNLLKFDSKTQQFNAIKNGRGAALADDNSYLYAWVKR--NPKFTVGIKTIGPNQYISGAV 239 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGID 280 +G + + + E IT+ N N +++ + G + Sbjct: 240 KKG--------NKSLQKWMDRE---ITKLNRESFFTYDYNKELKPYFGKE 278 >gi|167039129|ref|YP_001662114.1| extracellular solute-binding protein [Thermoanaerobacter sp. X514] gi|300913281|ref|ZP_07130598.1| extracellular solute-binding protein family 3 [Thermoanaerobacter sp. X561] gi|307723705|ref|YP_003903456.1| family 3 extracellular solute-binding protein [Thermoanaerobacter sp. X513] gi|166853369|gb|ABY91778.1| extracellular solute-binding protein, family 3 [Thermoanaerobacter sp. X514] gi|300889966|gb|EFK85111.1| extracellular solute-binding protein family 3 [Thermoanaerobacter sp. X561] gi|307580766|gb|ADN54165.1| extracellular solute-binding protein family 3 [Thermoanaerobacter sp. X513] Length = 260 Score = 174 bits (442), Expect = 2e-41, Method: Composition-based stats. Identities = 59/276 (21%), Positives = 108/276 (39%), Gaps = 26/276 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGD- 55 M K + +L + I+ S A+ L IK++G + G + F K G+ Sbjct: 1 MNKKPLLLLLTMTIVLSLFLSACGNEPANTLDKIKQKGVIVMGTSADFPPFEFHKVEGNK 60 Query: 56 --WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 GFD+D A++ + K++ ++ K ALQ+ +ID++ T + + Sbjct: 61 DTIVGFDIDIANAIAKKLG---VKLEIKDMDFKGLIPALQAGRIDMIVAGMTPTP--DRA 115 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F + Y Q ++ I L G ++ VQ GTT+E + Sbjct: 116 ENVDFSDLYYNSQQVVVVKNDSPILKFDDLKGKTVAVQIGTTSEEA-----AKKIPDVNL 170 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP-DIISKSP--LAPAI 230 RV + + RCDA + + A + IL I+ +A A+ Sbjct: 171 KQLNRVGDAFMDLKNGRCDAIVLEDTVANAY---LKEYKDMKILSMKEINTEEGGMAVAV 227 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 +G+ E NI++ + T+ E K +++ K Sbjct: 228 AKGNKELVNIINEVIKELKTSGE---YDKLVDKWFK 260 >gi|307265619|ref|ZP_07547173.1| extracellular solute-binding protein family 3 [Thermoanaerobacter wiegelii Rt8.B1] gi|306919417|gb|EFN49637.1| extracellular solute-binding protein family 3 [Thermoanaerobacter wiegelii Rt8.B1] Length = 261 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 59/274 (21%), Positives = 106/274 (38%), Gaps = 22/274 (8%) Query: 1 MYKD----FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD- 55 M K F + L ++ + A+ L IK++G + G + + K G+ Sbjct: 1 MNKKTLFVFLTMTIILGLILSACGTKPANTLDKIKEKGVIVMGTSADFPPYEFHKVEGNK 60 Query: 56 --WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 GFDVD A++ + K++ ++ K ALQ+ +ID++ T R S Sbjct: 61 DTIVGFDVDIANAIAKKLG---VKLEIKDMDFKGLIPALQAGRIDMIVAGMTPTPERAKS 117 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + + Y Q ++ IS L G ++ VQ GTT+E + Sbjct: 118 VDF--SDLYYNSQQVVVVKNDSPISKFDDLKGKTVAVQIGTTSEEA-----AKKIPDVNL 170 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAIIQ 232 RV + + RCDA + + A + V + +I + A A+ + Sbjct: 171 KQLNRVGDAFMDLKNGRCDAIVLENTVANAYLKEYKD-MKMVFMKEINTVDNGSAVAVAK 229 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 G+ E NI++ + + E K I++ K Sbjct: 230 GNKELVNIINEVIKELKASGE---YDKLIDKWFK 260 >gi|209547540|ref|YP_002279458.1| family 3 extracellular solute-binding protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538784|gb|ACI58718.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 261 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 53/262 (20%), Positives = 97/262 (37%), Gaps = 11/262 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + F +I L F S +++A L DI RG L+ + F V + G+D Sbjct: 2 LTRRVFFAIATLAATFGISSTSHADALADITARGTLRVAVPQDFPPFGSVGTDMAPMGYD 61 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D ++ + K + +P+ + R LQ+ ++D++ + RE + + Sbjct: 62 IDVANLIAEKLG---VKTELVPVTSANRVPYLQTNKVDLVISSLGKNAEREKVIDFSAAY 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +F+G I+ L+G SI V G +L L A +E Sbjct: 119 APFFNG--VFAPADLSIAKAEDLAGKSIAVTRGAVEDLELTKIAPA---DATIKRYEDNN 173 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +A+ + + D A+ P + L +I SP + + Sbjct: 174 GTISAFLSGQVDTVATGNVVAAAILA--KNPPKRPELKFLIKNSPCYIGLNKEQAALLEK 231 Query: 241 VSWTHYAMVTAEELG-ITQKNI 261 V+ A T L I+QK + Sbjct: 232 VNGIIAAAKTDGALNSISQKWL 253 >gi|120612711|ref|YP_972389.1| extracellular solute-binding protein [Acidovorax citrulli AAC00-1] gi|120591175|gb|ABM34615.1| amino acid ABC transporter substrate-binding protein, PAAT family [Acidovorax citrulli AAC00-1] Length = 314 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 44/273 (16%), Positives = 96/273 (35%), Gaps = 10/273 (3%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 ++L L + +++A +L I G L FA A G G+ V+ C+ + Sbjct: 27 ALLGAASLCC-AVASHAGVLERIASGGKLVVAYRDAASPFAFKDAAGRPAGYAVELCQRV 85 Query: 68 SSAI----FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 + A+ +I Y+P++ R A+ D+ ++ R ++ + Sbjct: 86 AEAVRRKTGRKGMEIAYVPVDLGNRMEAITQGGADLECGSSTNNAERRQNVAFTI--PHF 143 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 G ++ I + + G + GTT + + H ++ + I + Sbjct: 144 ITGTRLLVKASSPIERIEDMGGHKLVSTRGTTALRAVQQLNREHALQINVIEAPDDQRAV 203 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 DA+ D LYA P ++ ++ LA + + D E+ +V Sbjct: 204 EMVEKGEADAFAMDDVLLYAFAAGRPDPKALKVVGKFVTAEALAIMLPKDDPEFKKVVDD 263 Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRF 276 ++++ E+ ++ P + Sbjct: 264 EMRRLISSREI---HPIYDRWFLQPAPPTNRAL 293 >gi|242240518|ref|YP_002988699.1| extracellular solute-binding protein family 3 [Dickeya dadantii Ech703] gi|242132575|gb|ACS86877.1| extracellular solute-binding protein family 3 [Dickeya dadantii Ech703] Length = 278 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 55/278 (19%), Positives = 104/278 (37%), Gaps = 20/278 (7%) Query: 4 DFFVSILCLIILFFTS--------FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 S+L L++L + + S L ++ +RG L+ G F NG Sbjct: 11 KVIASVLALLVLSGCTPTEEKKETSAAPQSALQNVLQRGTLRVGDCLSFAPFGFYDKNGA 70 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G+DVD +AL+ A+ K++ + + R LQ+ ++D++ N L R +G Sbjct: 71 PDGYDVDLAKALAKAMG---VKLEMVNTTSANRIPNLQTNKVDVVFCNFTRNLERAKEIG 127 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + ++ K GI S ++G +I G+T D + + Sbjct: 128 F--TNPYVVASEAMLVRKNSGIQSAHDMAGKTIATVKGSTN----GDDVRNLGIDVKIQE 181 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 ++ + A + + DA D + L P+ V ++ A + QGD Sbjct: 182 YDSSQAAILAIKQGQADAMVEDNNFLAYQASL--DPTLIVTNEALVPLEYNAFGVKQGDQ 239 Query: 236 EWYNIVSWTHYA-MVTAEELGITQKNINQVSKDTTNPD 272 W + ++ + + E + QK + NP Sbjct: 240 VWTHYLNEFLFEINASGENAALYQKWFGSKPRYPLNPQ 277 >gi|227509837|ref|ZP_03939886.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190761|gb|EEI70828.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 277 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 52/285 (18%), Positives = 109/285 (38%), Gaps = 23/285 (8%) Query: 1 MYKDF-----FVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVK- 51 M K V++L +++ ST+ +L D K+ + G+ F + Sbjct: 1 MRKILSKVGLVVALLIMVVSLGACSSTSGSKRDVLKDDKQSNTITWGVKADTKLFGLMDV 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 + KGF+VD +A++ I K +++ + ++ R L + ID + T R Sbjct: 61 KDNQIKGFEVDLAKAMTKEILGKKGKARFIQVTSQTRMPLLANGNIDAIMATMTITPQRA 120 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNM 169 + + + GQ ++ I +V L GA + G+ + + + Sbjct: 121 EQVDFSRS--YFDAGQAILVKDGSPIKNVRDLNRKGAVVLGVVGSNSVQNIKKFAPKA-- 176 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + + A ++ + DA T D LY + + N + ++ +K P A Sbjct: 177 --RVLQLSDYSQALTALKSGQGDALTTDNGILYGMSIENPG---YSVVGGTFTKEPYGIA 231 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 +G ++N ++ +A+ E G K I + + D++ Sbjct: 232 TAKGQRPFHNAIN---HALTKVENSGEYNKLIYKWFHNVKGFDMK 273 >gi|299531960|ref|ZP_07045360.1| amino-acid ABC transporter binding protein ybeJ precursor [Comamonas testosteroni S44] gi|298720135|gb|EFI61092.1| amino-acid ABC transporter binding protein ybeJ precursor [Comamonas testosteroni S44] Length = 320 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 52/275 (18%), Positives = 103/275 (37%), Gaps = 10/275 (3%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAE-VKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + + L + G + G+ V + + AN + G+ +D C + AI ++++Y Sbjct: 44 SASPTLQRWQAGGTVVLGVREAAVPMSYAIGANEKFVGYHMDLCERVVHAI-APRAQLKY 102 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + L + + + D + L R+ + TY + GI+S Sbjct: 103 MVLTPQNTMPLINNGTADFNCASMTNNLTRQKQVAFGL--TTYVSEVRMAVRVDSGITSF 160 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 QL G ++ GTT L Y + + + ++ + E + R DA+ D + Sbjct: 161 KQLQGRNVGAITGTTAVQILRKYASDNELNFKTLMSKDQFESFLMLESGRVDAFVLDDNM 220 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L + + P + I+ ++I P+A + D + V M+ + EL K Sbjct: 221 LAGVIGQSKNPKGYKIVGEVIGAEPIAIQFSKDDPQIKKAVDGAILQMIRSGEL---HKL 277 Query: 261 INQVSKDTTNP-DVQRFLGIDKSSNIGEALGLTKD 294 N+ P +V L + + + L D Sbjct: 278 YNKWFMQPIAPKNVN--LNLPMGEVLKKQLATPND 310 >gi|300856477|ref|YP_003781461.1| putative amino acid ABC transporter periplasmic solute-binding protein [Clostridium ljungdahlii DSM 13528] gi|300436592|gb|ADK16359.1| predicted ABC-type aminoacid transporter, periplasmic solute-binding component [Clostridium ljungdahlii DSM 13528] Length = 268 Score = 173 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 91/268 (33%), Gaps = 14/268 (5%) Query: 1 MYKDFFVSILCLIILFFT------SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M K + L + +L ++ DIK +G G++ G Sbjct: 1 MKKKLGILTLVIFLLGIILTGCGQGQKSSDKSWDDIKSKGQFVVGLDDSFPPMGFRDEKG 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 GFD+D +A + + K+ + P+ L+L +K ID++ T R+ + Sbjct: 61 QIVGFDIDMAKAAAQKMG---VKVVFKPVEWDGIILSLNNKDIDVIWNGLTITDKRKKQI 117 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + + Q ++ I + LSG ++ +Q G+++E L + Sbjct: 118 AF--SKVYLQNKQIIVVRNDSNIKNKKDLSGKTVGLQMGSSSETALNSDAATAKSLKNIR 175 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + E R DA D + +P + IL D K I + D Sbjct: 176 KYSNNTEALLDLNQGRIDAVVVD--EVVGRYYLQKKPGLYKILEDNFGKEDYGVGIRKSD 233 Query: 235 TEWYNIVSWTHYAMVTAE-ELGITQKNI 261 + + +M I+QK Sbjct: 234 ESFKEKLDEALDSMKKDGTANKISQKWF 261 >gi|288922652|ref|ZP_06416828.1| extracellular solute-binding protein family 3 [Frankia sp. EUN1f] gi|288346010|gb|EFC80363.1| extracellular solute-binding protein family 3 [Frankia sp. EUN1f] Length = 323 Score = 173 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 45/250 (18%), Positives = 97/250 (38%), Gaps = 10/250 (4%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 S + ++ G + G F G +GFDV+ + +++A+ K++++ Sbjct: 74 GSTMAKLQSGGTITVGTKFDQPLFGLKNLRGVPEGFDVEIAKIITNALGIPADKVKFVET 133 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQ 142 + R +Q ++D++ R+ + A Y GQ ++ I+ Sbjct: 134 VSVNREPFIQQHKVDMVVATYTINDKRKQVVDFA--GPYYVAGQTLMVRAGESAITGKDS 191 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+G ++C +G+T A+ + + ++F+ + A + + DA T D + L Sbjct: 192 LAGKNVCSVSGSTP----AERIRTEAPQAKLVLFDVYSKCAEALKNGQVDAVTTDNAILL 247 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE-LGITQKNI 261 L + P ++ S P I +GD E+ ++ T A + + Sbjct: 248 GLM--DSDPGTFKLVGKPFSTEPYGIGIAKGDDEFRTFINETLTAAYADGRYEKAYEATL 305 Query: 262 NQVSKDTTNP 271 +V + P Sbjct: 306 GKVEPNMPKP 315 >gi|227534089|ref|ZP_03964138.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239629876|ref|ZP_04672907.1| ABC-type amino acid transport/signal transduction system [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301066997|ref|YP_003789020.1| amino acid ABC transporter/signal transduction system periplasmic protein [Lactobacillus casei str. Zhang] gi|227188270|gb|EEI68337.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239527488|gb|EEQ66489.1| ABC-type amino acid transport/signal transduction system [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300439404|gb|ADK19170.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus casei str. Zhang] Length = 274 Score = 173 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 50/255 (19%), Positives = 93/255 (36%), Gaps = 14/255 (5%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + IL K + G+ F + G +GFDVD +A++ I K Q Sbjct: 29 ADRDILTTAKTTNTIVWGVKADTRLFGLMDIKTGKIEGFDVDMAKAITKQILGSKGKAQL 88 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + + + R ++ +D + T R+ L F + + GQ ++ K I SV Sbjct: 89 VQVTSDTRVPMIKGGNVDAVIATMTITPERQK--ILDFSDVYFNAGQSILVKKGSPIKSV 146 Query: 141 SQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L G + G+ + D K + + A ++ + DA T D Sbjct: 147 KDLKKGTKVIGVQGSNSV----DNVKKAAPDTTVLQLSDYAQAFTALKSGQGDALTTDNG 202 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 LY + + +++ +K P AI +G + V+ A+ ++ G K Sbjct: 203 ILYGMSEQDPN---YIVTGGTFTKEPYGIAINKGQKPFVQAVN---KAIKQLKQNGTYAK 256 Query: 260 NINQVSKDTTNPDVQ 274 I + D ++ Sbjct: 257 LIKKWFGDVPGFSLK 271 >gi|256375586|ref|YP_003099246.1| extracellular solute-binding protein family 3 [Actinosynnema mirum DSM 43827] gi|255919889|gb|ACU35400.1| extracellular solute-binding protein family 3 [Actinosynnema mirum DSM 43827] Length = 295 Score = 173 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 50/271 (18%), Positives = 91/271 (33%), Gaps = 16/271 (5%) Query: 16 FFTSFSTNAS-------ILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRAL 67 S + A +K RG + G+ A + GFDVD R + Sbjct: 31 AAPSQAAEADVKVDGSTTFEKMKSRGKVVIGVKEDQPNLGFKDATTNKYSGFDVDIARLV 90 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 ++ + D SKI+Y + + R AL + +D R+ + A + GQ Sbjct: 91 AAKLGFDESKIEYKAIASAGREQALINGDVDYYVGTYTINDGRKEKIAFA--GPYFVAGQ 148 Query: 128 GFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 ++ K I+ L G +C G+T + D + + F+ + + Sbjct: 149 DLLVRKDDASITGKDTLMGKKVCSVTGSTPIKRIKD--EKLTEDANITEFQNYSQCVSKL 206 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 DA T D + L P + ++ SK P + + D + V+ Sbjct: 207 AEGAVDAVTTDDAILKGYAAQ--EPDKFKVVGAPFSKEPYGIGLNKEDKPLRDKVNDILQ 264 Query: 247 AMVTAEELG-ITQKNINQVSKDTTNPDVQRF 276 A + I + + P + R+ Sbjct: 265 AAMDDGTWKSIYDATLGKSGSPAEAPAIDRY 295 >gi|238897253|ref|YP_002922930.1| polar amino acid ABC transporter periplasmic amino acid-binding subunit [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465008|gb|ACQ66782.1| polar amino acid ABC transporter periplasmic amino acid-binding subunit [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 277 Score = 173 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 58/260 (22%), Positives = 95/260 (36%), Gaps = 16/260 (6%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSK 77 S A L DIKK G ++ + F G+DVD A+ A + Sbjct: 18 SVMVKADKLNDIKKAGKIRVAVFDNNPPFGYYDPKTKKLIGYDVDIAHAIGKAFGVN--- 74 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 I+++ N R L+SK++D+++ N T R + + + GQ FI K + Sbjct: 75 IEFVETNPANRIPLLKSKKVDLIAANFTITPERAKEVDFSL--PYFSTGQKFIAKKG-VL 131 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 L I GT E+TL + + + I ++ + A R A T D Sbjct: 132 KKPDDLKSLRIGADKGTVQEITLRENYPSAI----VISYDDTPQAFMALRNENVQAITQD 187 Query: 198 ISALYALK--LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + L L L + + I I+K A +G+ N ++ + E+ G Sbjct: 188 DAKLVGLMGNLKAEMKASFEISHFSITKEYQGIATAKGEKNLINAINTIL---LKMEKEG 244 Query: 256 ITQKNINQVSKDTTNPDVQR 275 K N+ T R Sbjct: 245 EAVKIYNRWFGPDTKTAQPR 264 >gi|224372628|ref|YP_002607000.1| binding component of abc transporter [Nautilia profundicola AmH] gi|223589307|gb|ACM93043.1| binding component of abc transporter [Nautilia profundicola AmH] Length = 266 Score = 173 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 59/273 (21%), Positives = 107/273 (39%), Gaps = 18/273 (6%) Query: 2 YKDFFVSILCLIILFFTS--FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 K ++I+ L + F + S L I ++G L+ + G V F +G GF Sbjct: 1 MKKLLIAIIALASMLFAADFNVWKNSTLHSIVQKGELRVCLEPGYVPFEMRDKHGRIIGF 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD + ++ + K++ +P AL + + DI+ T R + + A Sbjct: 61 DVDISKKMAKDMG---VKLKLVPTAWDGIIPALITGKCDIIISGMTITQQRNLKVMFAN- 116 Query: 120 PITYFDGQGFIMHKK-KGISSVSQLSGASICVQA--GTTTELTLADYFKAHNMKYHPIVF 176 + GQ +++KK G+ S L I + GTT E+ FK +K F Sbjct: 117 -PYFLVGQTLLVNKKHAGVKSYKDLDKKGIVITTKLGTTGEIAARKLFKHATIK----TF 171 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + +R DA+ D L + + + L + ++ PL AI GD + Sbjct: 172 DSESAAVQEVLNNRADAFIYDKP-YNELFMAGKGKGKLIFLKEDLTYEPLGFAINHGDPD 230 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 + +W + + + G K ++ + T Sbjct: 231 FL---NWLNNFLRQIKHDGTYDKFYHRWFQSTD 260 >gi|297544040|ref|YP_003676342.1| extracellular solute-binding protein family 3 [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296841815|gb|ADH60331.1| extracellular solute-binding protein family 3 [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 260 Score = 173 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 58/276 (21%), Positives = 107/276 (38%), Gaps = 26/276 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVKANGD- 55 M K F ++L + ++ + S L IK++G + G + F K G+ Sbjct: 1 MNKKSFTALLIITLVLSLFLAGCGSKPTNTLEKIKQKGVIVMGTSADFPPFEFHKVEGNK 60 Query: 56 --WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 GFD+D A++ + K++ ++ K ALQS +ID++ T + + Sbjct: 61 DTIVGFDIDIANAIAKKLG---VKLEIKDMDFKGLIPALQSGRIDMIVAGMTPTP--DRA 115 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F + Y Q ++ I L G ++ VQ GTT+E + Sbjct: 116 ENVDFSDLYYNSQQVVVVKNDSPILKFDDLKGKTVAVQIGTTSEEA-----AKKIPDVNL 170 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP-DIISKSP--LAPAI 230 RV + + RCDA + + A + IL I+ +A A+ Sbjct: 171 KQLNRVGDAFMDLKNGRCDAIVLEDTVANAY---LKEYKDMKILSMKEINTEEGGMAVAV 227 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 +G+ E NI++ + + E K +++ K Sbjct: 228 AKGNKELVNIINEVIKDLKASGE---YDKLVDKWFK 260 >gi|256844627|ref|ZP_05550112.1| glutamine-binding protein [Lactobacillus crispatus 125-2-CHN] gi|256613168|gb|EEU18372.1| glutamine-binding protein [Lactobacillus crispatus 125-2-CHN] Length = 272 Score = 173 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 40/265 (15%), Positives = 93/265 (35%), Gaps = 13/265 (4%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIF 72 L + ++ +K+ + G+ F G +GF++D +AL+ + Sbjct: 19 TLTACGKHASNNVYQKVKESKTIVWGVRADTRLFGLTNIKTGHIEGFEIDLAKALTKQML 78 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 +K ++ A R L++ +D + T R + + G ++ Sbjct: 79 GKDAKTDFVTTTANTRIPLLKNGNVDAVLATMTITPERAKQVTF--SKPYFPAGSSLLVP 136 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 I +V L G ++ GTT + Y + ++ + +A +A++ Sbjct: 137 NNSKIKNVKDLEGKTVLAVKGTTAVDDVHKYAPKA----RILQYDDYGQAMSALKANQGV 192 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 A T D L + N + ++ + S +P A+ +G + + + + Sbjct: 193 ALTTDNGLLAGIAQENPG---YKLVGGVYSNAPYGIAVNKGQKQMADHIDQALN---ELQ 246 Query: 253 ELGITQKNINQVSKDTTNPDVQRFL 277 + G + I + ++ L Sbjct: 247 KNGTYDRLIKKWFAGIPGFSLKGVL 271 >gi|308185786|ref|YP_003929917.1| ABC transport system, periplasmic protein precursor [Pantoea vagans C9-1] gi|308056296|gb|ADO08468.1| putative ABC transport system, periplasmic protein precursor [Pantoea vagans C9-1] Length = 261 Score = 173 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 48/272 (17%), Positives = 103/272 (37%), Gaps = 13/272 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K +++ +L + S A L +I+KRG ++ + F V + +G+D+ Sbjct: 1 MKKVLMAVATAALLMAQTGSALADQLQNIQKRGVIRVAVPQDFPPFGSVGTDLQPQGYDI 60 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D + L+ + K+Q +P+++ R LQ+ ++D++ + RE + Sbjct: 61 DTAKYLAKQM---KLKLQLVPVSSANRVPYLQTDKVDLVISSMGKNAEREKVIDFTRAYA 117 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 +F G K I + S LSG SI V G ++ L++ +E Sbjct: 118 PFF--LGVFGPKGDEIKAASALSGKSIGVTRGAVEDMVLSEVAPK---DAQVKRYEDNNT 172 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +AY + + + A+ P++ + ++ SP + + + V Sbjct: 173 TLSAYLSGQVQYVATGNLVVAAIARQ--NPAKAPVAQFMLKDSPCYIGLKKDEPALKAKV 230 Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 + + + G K + K ++ Sbjct: 231 NELIEQGI---KDGTLNKLSEEWLKAPLPANL 259 >gi|227877818|ref|ZP_03995842.1| glutamine ABC superfamily ATP binding cassette transporter, binding precursor [Lactobacillus crispatus JV-V01] gi|256850696|ref|ZP_05556120.1| glutamine-binding protein [Lactobacillus crispatus MV-1A-US] gi|293381615|ref|ZP_06627599.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus crispatus 214-1] gi|227862579|gb|EEJ70074.1| glutamine ABC superfamily ATP binding cassette transporter, binding precursor [Lactobacillus crispatus JV-V01] gi|256712467|gb|EEU27464.1| glutamine-binding protein [Lactobacillus crispatus MV-1A-US] gi|290921799|gb|EFD98817.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus crispatus 214-1] Length = 272 Score = 173 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 40/265 (15%), Positives = 93/265 (35%), Gaps = 13/265 (4%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIF 72 L + ++ +K+ + G+ F G +GF++D +AL+ + Sbjct: 19 TLTACGKHASNNVYQKVKESKTIVWGVRADTRLFGLTNIKTGHIEGFEIDLAKALTKQML 78 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 +K ++ A R L++ +D + T R + + G ++ Sbjct: 79 GKDAKTDFVTTTANTRIPLLKNGNVDAVLATMTITPERAKQVTF--SKPYFPAGSSLLVP 136 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 I +V L G ++ GTT + Y + ++ + +A +A++ Sbjct: 137 NNSKIKNVKDLEGKTVLAVKGTTAVDDVHKYAPKA----RILQYDDYGQAMSALKANQGV 192 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 A T D L + N + ++ + S +P A+ +G + + + + Sbjct: 193 ALTTDNGLLAGIAQENPG---YKLVGGVYSNAPYGIAVNKGQKQMADHIDQALN---ELQ 246 Query: 253 ELGITQKNINQVSKDTTNPDVQRFL 277 + G + I + ++ L Sbjct: 247 KNGTYDRLIKKWFAGIPGFSLKGVL 271 >gi|238787904|ref|ZP_04631700.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia frederiksenii ATCC 33641] gi|238723852|gb|EEQ15496.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia frederiksenii ATCC 33641] Length = 263 Score = 173 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 49/263 (18%), Positives = 101/263 (38%), Gaps = 12/263 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L ++ + S A L I++RG L+ + F V + +G+D Sbjct: 3 MKKRML-AWLGAALILVQAPSVLADQLEQIQQRGVLRVAVPQDFPPFGSVGTDLQPQGYD 61 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D L+ + K+Q +P+ + R LQ+ ++D++ + RE ++ + Sbjct: 62 IDMAHYLADKM---KLKLQLVPVTSANRVPYLQTDKVDLVISSLGKNPEREKAIAFSRAY 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +F G K + QL+G ++ V G ++ L++ +E Sbjct: 119 APFF--LGVFGAKDDALQQPEQLAGKTVGVTRGAVEDMVLSELAPKQA---QIKRYEDNN 173 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +AY + + D + AL P + ++ SP + QG+ Sbjct: 174 TTLSAYLSGQVDYLATGNLVVSALARQ--NPVHAPVAKFMLKDSPCYIGLRQGEPALKAK 231 Query: 241 VSWTHYAMVTAEEL-GITQKNIN 262 V + + L G+++K + Sbjct: 232 VDALIEEALQDQTLNGLSEKWLK 254 >gi|295394798|ref|ZP_06805013.1| glutamate ABC superfamily ATP binding cassette transporter, binding protein [Brevibacterium mcbrellneri ATCC 49030] gi|294972394|gb|EFG48254.1| glutamate ABC superfamily ATP binding cassette transporter, binding protein [Brevibacterium mcbrellneri ATCC 49030] Length = 295 Score = 173 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 39/249 (15%), Positives = 90/249 (36%), Gaps = 12/249 (4%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQY 80 ++ K G +K G+ G + A +GFD++ + +S+++ +I++ Sbjct: 48 ADSPTWKKAKDAGKIKVGVKYDQPGLGNISAGADKPEGFDIEIAKMVSASLGFKADEIEF 107 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + + R LQ +D++ R+ + A Y GQ ++ I Sbjct: 108 VETVSANREPFLQQGNVDMIVATYTINDKRKEVVDFA--GPYYVAGQDLLVKADSDIDGP 165 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L+G +C G+T + + +K + ++ + ++ DA T D + Sbjct: 166 DSLAGKKVCSVDGSTPAQNIQEKYKDA----ELVTYDAYSKCVTDLQSGNVDAVTTDDAI 221 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L E ++ ++ P + + D + V+ A + + +K Sbjct: 222 LRGYAAQYK--DEFKVVGKPFTEEPYGIGLPKDDKALRDAVNDALEASKDSGDW---KKA 276 Query: 261 INQVSKDTT 269 D++ Sbjct: 277 FEYTLGDSS 285 >gi|145298525|ref|YP_001141366.1| ABC-type amino acid transporter, periplasmic binding protein [Aeromonas salmonicida subsp. salmonicida A449] gi|142851297|gb|ABO89618.1| ABC-type amino acid transporter, periplasmic binding protein [Aeromonas salmonicida subsp. salmonicida A449] Length = 260 Score = 173 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 59/271 (21%), Positives = 103/271 (38%), Gaps = 20/271 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +S L L L + + AS L + RG L+ G + G F G + GFD Sbjct: 1 MIKKLILSTLLLCGL--ANAAAPASTLDAVLDRGVLRVGFDAGYQPFEMTNKQGQYIGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + ++ + K++++ AL + + D++ T R + + A Sbjct: 59 VDLAKMVAKEMG---VKVEFVNTAWDGIIPALLTDKFDVIMGGMTVTPQRNLRVNFAD-- 113 Query: 121 ITYFDGQGFIMHKKKG--ISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVF 176 GQ ++ K K I S S L+ I V+ GTT E + + F Sbjct: 114 PYIVVGQTIVLRKDKAGEIKSFSDLNDPKYKIAVKLGTTGEQAVKRLIPKA----TLLQF 169 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E ++ + DA+ D+ Y + V L + PLA AI +GD Sbjct: 170 ETQDDAKLEVINGKVDAFVYDLP--YNAIFASQNTGAVVHLDKPFTFEPLAWAIRKGDQ- 226 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 + ++W + + + G + + + Sbjct: 227 --DTLNWFNNYLRQIKGDGSYDRLYKKWFES 255 >gi|116495484|ref|YP_807218.1| amino acid ABC transporter periplasmic protein [Lactobacillus casei ATCC 334] gi|116105634|gb|ABJ70776.1| amino acid ABC transporter substrate-binding protein, PAAT family [Lactobacillus casei ATCC 334] Length = 274 Score = 173 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 50/255 (19%), Positives = 93/255 (36%), Gaps = 14/255 (5%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + IL K + G+ F + G +GFDVD +A++ I K Q Sbjct: 29 ADRDILTTAKTTNTIVWGVKADTRLFGLMDIKTGKIEGFDVDMAKAITKQILGSKGKAQL 88 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + + + R ++ +D + T R+ L F + + GQ ++ K I SV Sbjct: 89 VQVTSDTRVPMIKGGSVDAVIATMTITPERQK--ILDFSDVYFNAGQSILVKKGSPIKSV 146 Query: 141 SQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L G + G+ + D K + + A ++ + DA T D Sbjct: 147 KDLKKGTKVIGVQGSNSV----DNVKKAAPDTTVLQLSDYAQAFTALKSGQGDALTTDNG 202 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 LY + + +++ +K P AI +G + V+ A+ ++ G K Sbjct: 203 ILYGMSEQDPN---YIVTGGTFTKEPYGIAINKGQKPFVQAVN---KAIKQLKQNGTYAK 256 Query: 260 NINQVSKDTTNPDVQ 274 I + D ++ Sbjct: 257 LIKKWFGDVPGFSLK 271 >gi|264680798|ref|YP_003280708.1| amino-acid ABC transporter binding protein ybeJ precursor [Comamonas testosteroni CNB-2] gi|262211314|gb|ACY35412.1| amino-acid ABC transporter binding protein ybeJ precursor [Comamonas testosteroni CNB-2] Length = 320 Score = 173 bits (439), Expect = 3e-41, Method: Composition-based stats. Identities = 52/275 (18%), Positives = 103/275 (37%), Gaps = 10/275 (3%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAE-VKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + + L + G + G+ V + + AN + G+ +D C + AI ++++Y Sbjct: 44 SASPTLQRWQAGGTVVLGVREAAVPMSYAIGANEKFVGYHMDLCERVVHAI-APRAQLKY 102 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + L + + + D + L R+ + TY + GI+S Sbjct: 103 MVLTPQNTMPLINNGTADFNCASMTNNLTRQKQVAFGL--TTYVSEVRMAVRADSGITSF 160 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 QL G ++ GTT L Y + + + ++ + E + R DA+ D + Sbjct: 161 RQLQGRNVGAITGTTAVQILRKYASDNELNFKTLMSKDQFESFLMLESGRVDAFVLDDNM 220 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L + + P + I+ ++I P+A + D + V M+ + EL K Sbjct: 221 LAGVIGQSKNPKGYKIVGEVIGAEPIAIQFSKNDPQIKKAVDGAILQMIRSGEL---HKL 277 Query: 261 INQVSKDTTNP-DVQRFLGIDKSSNIGEALGLTKD 294 N+ P +V L + + + L D Sbjct: 278 YNKWFMQPIAPKNVN--LNLPMGEVLKKQLAAPND 310 >gi|289577746|ref|YP_003476373.1| extracellular solute-binding protein family 3 [Thermoanaerobacter italicus Ab9] gi|289527459|gb|ADD01811.1| extracellular solute-binding protein family 3 [Thermoanaerobacter italicus Ab9] Length = 260 Score = 173 bits (439), Expect = 3e-41, Method: Composition-based stats. Identities = 58/276 (21%), Positives = 107/276 (38%), Gaps = 26/276 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVKANGD- 55 M K F ++L + ++ + S L IK++G + G + F K G+ Sbjct: 1 MNKKSFTALLIITLVLSLFLAGCGSKPTNTLEKIKQKGVIVMGTSADFPPFEFHKVEGNK 60 Query: 56 --WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 GFD+D A++ + K++ ++ K ALQS +ID++ T + + Sbjct: 61 DTIVGFDIDIANAIAKRLG---VKLEIKDMDFKGLIPALQSGRIDMIVAGMTPTP--DRA 115 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F + Y Q ++ I L G ++ VQ GTT+E + Sbjct: 116 ENVDFSDLYYNSQQVVVVKNDSPILKFDDLKGKTVAVQIGTTSEEA-----AKKIPDVNL 170 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP-DIISKSP--LAPAI 230 RV + + RCDA + + A + IL I+ +A A+ Sbjct: 171 KQLNRVGDAFMDLKNGRCDAIVLEDTVANAY---LKEYKDMKILSMKEINTEEGGMAVAV 227 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 +G+ E NI++ + + E K +++ K Sbjct: 228 AKGNKELVNIINEVIKDLKASGE---YDKLVDKWFK 260 >gi|288935409|ref|YP_003439468.1| extracellular solute-binding protein family 3 [Klebsiella variicola At-22] gi|288890118|gb|ADC58436.1| extracellular solute-binding protein family 3 [Klebsiella variicola At-22] Length = 261 Score = 173 bits (439), Expect = 3e-41, Method: Composition-based stats. Identities = 47/262 (17%), Positives = 98/262 (37%), Gaps = 11/262 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K +++ L + + A L DI+KRG ++ + F V + +G+D+ Sbjct: 1 MKKLLIALAGAACLLSSVSAAQADQLQDIEKRGVIRIAVPQDFPPFGSVGTDLQPQGYDI 60 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D R L+ ++ K+Q +P+ + R LQ+ ++D++ + RE + + Sbjct: 61 DMARYLAKSM---KLKLQLVPVTSANRVPYLQTDKVDLVISSLGKNAEREKVIDFSRAYA 117 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 +F G K + + LSG SI V G ++ L +E Sbjct: 118 PFF--LGVFGPKGAELKDAAALSGKSIGVTRGAVEDMVLTSVAPQAA---QIKRYEDNNT 172 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +AY + + + A+ N + + ++ SP + + + V Sbjct: 173 TLSAYLSGQVQYVATGNLVVAAISRQNADKA--PVPSFMLKDSPCFIGLKKNEPALKEKV 230 Query: 242 SWTHYAMVTAEEL-GITQKNIN 262 + L G+++K + Sbjct: 231 DTLIEQGIKDGTLNGLSEKWLK 252 >gi|300313535|ref|YP_003777627.1| amino acid ABC transporter/signal transduction system periplasmic protein/domain-containing protein [Herbaspirillum seropedicae SmR1] gi|300076320|gb|ADJ65719.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain protein [Herbaspirillum seropedicae SmR1] Length = 260 Score = 173 bits (439), Expect = 3e-41, Method: Composition-based stats. Identities = 48/264 (18%), Positives = 100/264 (37%), Gaps = 15/264 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + L + F++ A L DI+K G L+ + F V A+ +G D Sbjct: 1 MKLTKLLLGLMAGAMMFSASVARADALDDIQKHGTLRVAVPADFPPFGSVDADLKPQGLD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D ++ + K++ +P+++ R L +K++D++ + RE + + Sbjct: 61 IDVATLIAKKLG---VKVELIPVSSANRIPYLTTKKVDLVISSMGKNAEREKVIDFSAAY 117 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +F+G + S + L+G +I V G+ +L L A +E Sbjct: 118 APFFNG--VFGPADLSVKSAADLAGKTIAVTRGSVEDLELTKIVPA---SATVKRYEDNN 172 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTND--RPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +++ + + A+ N +P ++ D SP + +G+ + Sbjct: 173 STISSFLSGQVQLVATGNVVAAAIIARNPPKKPETKFLIKD----SPCFIGLNKGEKKLQ 228 Query: 239 NIVSWTHYAMVTAEEL-GITQKNI 261 + V L I+QK + Sbjct: 229 DKVDAILAESKKDGSLSAISQKWL 252 >gi|302339794|ref|YP_003805000.1| extracellular solute-binding protein family 3 [Spirochaeta smaragdinae DSM 11293] gi|301636979|gb|ADK82406.1| extracellular solute-binding protein family 3 [Spirochaeta smaragdinae DSM 11293] Length = 266 Score = 173 bits (439), Expect = 3e-41, Method: Composition-based stats. Identities = 50/269 (18%), Positives = 99/269 (36%), Gaps = 12/269 (4%) Query: 1 MYKDFFVSILCLI----ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M + F+ S++ LI +LF ++S + I+ +G L G++ + + Sbjct: 1 MKRIFWFSLILLISSGALLFAGGDKESSSDIDAIRDKGVLVVGLDDSFPPMGFRDESNEI 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFD+D + + + K+++ P++ L+L ID++ T R + Sbjct: 61 VGFDIDLAKEAAKRLG---VKVEFKPVDWDGVILSLNKGDIDVVWNGMSITESRMEKINF 117 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + Q ++ K I S L G + +Q G+++E+ L +Y + + Sbjct: 118 --SKPYLDNRQIIVVPKGSAIKEKSDLVGKVVGLQMGSSSEVALNNYAEVAASLGDVKKY 175 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E A R DA D + + RP + ++ D I + D + Sbjct: 176 SNNVEALLDLAAGRTDAVIVD--EIVGRYYISKRPGIYQVIGDDFGSETYGVGIRKSDVK 233 Query: 237 WYNIVSWTHYAMVTAE-ELGITQKNINQV 264 + M I+QK + Sbjct: 234 LKQELDKVLDEMKADGSADEISQKWFGEA 262 >gi|261822707|ref|YP_003260813.1| extracellular solute-binding protein family 3 [Pectobacterium wasabiae WPP163] gi|261606720|gb|ACX89206.1| extracellular solute-binding protein family 3 [Pectobacterium wasabiae WPP163] Length = 268 Score = 173 bits (439), Expect = 3e-41, Method: Composition-based stats. Identities = 48/272 (17%), Positives = 100/272 (36%), Gaps = 13/272 (4%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K ++++ +L + S A L DI+KRG L+ + F V + +G+D+D Sbjct: 9 KKGLLAVMGAAMLLVQAGSAMADQLQDIEKRGVLRVAVPQDFPPFGSVGTDLQPQGYDID 68 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 R L+ + +Q +P+ + R LQ+ ++D++ + RE + + Sbjct: 69 IARYLAKEM---KLTLQLVPVTSANRVPYLQTNKVDLVISSLGKNAEREKVIDFSRAYAP 125 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 +F G K ++S L G SI V G ++ L + +E Sbjct: 126 FF--LGVFGPKDSALASSEALEGKSIGVTRGAVEDMVLTETAPKAA---QIKRYEDNNTT 180 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 +AY + + + + A+ P++ + ++ SP + + + V Sbjct: 181 LSAYLSGQVEFVATGNLVVAAIA--EQNPTKAPVAKFMLKDSPCYIGLKKDEPALKAKVD 238 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 + E L + K ++ Sbjct: 239 ALIEQALKDETLNSLS---EKWLKAPLPASIK 267 >gi|239817008|ref|YP_002945918.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] gi|239803585|gb|ACS20652.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] Length = 275 Score = 173 bits (439), Expect = 4e-41, Method: Composition-based stats. Identities = 55/253 (21%), Positives = 97/253 (38%), Gaps = 14/253 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSK 77 + +A L DIKK+G L G+ + G++VD A++ I P Sbjct: 18 GIAAHADQLADIKKKGELVVGVLGTDEPATFIDPKTRQIVGYEVDLVNAIAKKIGVKPV- 76 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 + R LQ +D+++ RE + + T+ GQ I+ K GI Sbjct: 77 --LKQIAVAARIPELQQGHVDLVAAGLTHNKEREAQIDFSL--TTFVTGQKAIVKKDSGI 132 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + V QL+G + G T E + + F+ ++ A + + Y D Sbjct: 133 TEVPQLAGKKVLTIRGGTQEPNIRKAVPTA----EVVTFDTSQQAFQALQQGKGVGYVDD 188 Query: 198 ISALY-ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 +AL + + +++V+L +S LA I +G++ +V T E+ G Sbjct: 189 EAALLRSYAKLGPQKAQYVVLKQNLSTEALAIGIKKGESALKAVVDDTLR---ELEKSGE 245 Query: 257 TQKNINQVSKDTT 269 QK + T Sbjct: 246 AQKIFVKWYGPNT 258 >gi|27378960|ref|NP_770489.1| substrate-binding protein [Bradyrhizobium japonicum USDA 110] gi|27352110|dbj|BAC49114.1| blr3849 [Bradyrhizobium japonicum USDA 110] Length = 302 Score = 173 bits (439), Expect = 4e-41, Method: Composition-based stats. Identities = 43/275 (15%), Positives = 91/275 (33%), Gaps = 11/275 (4%) Query: 4 DFFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 IL L L + + + + L +K+ + G V F+ + N GF +D Sbjct: 2 RLPTVILALTCLAGAASAEDLSGTLQKVKETKKITLGYQEASVPFSYLDGNQKPVGFAMD 61 Query: 63 FCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 C + + ++ L + + R + + +D+ T R+ + Sbjct: 62 ICLKIVDAVKKQLGMPDIVVETLAVTSSNRIPLMVNGTLDLHCSATTNNADRQKQVAF-- 119 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + F K I+++ L G ++ AG+ LA + + + + Sbjct: 120 TNTHFLSATRFAAKKAAKINTIDDLKGKAVTAVAGSVNLTQLAKVNTERTLGINIMPAKD 179 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-SPLAPAIIQGDTEW 237 E R AY D L + P+ +I + SK P + + D + Sbjct: 180 QAEAFLLLETDRAQAYALDDVQLAVAIARSKEPALFMISEETFSKPEPYGIMLRREDAPF 239 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272 + + + E+ + + + T P+ Sbjct: 240 KALADRATAELYASPEIEVL---YRKWLESPTPPN 271 >gi|311895159|dbj|BAJ27567.1| putative glutamate ABC transporter substrate-binding protein [Kitasatospora setae KM-6054] Length = 303 Score = 173 bits (439), Expect = 4e-41, Method: Composition-based stats. Identities = 52/252 (20%), Positives = 91/252 (36%), Gaps = 13/252 (5%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 T + L + RG L G + A G++ GFD++ R + + + P +I++ Sbjct: 52 TGSPTLDAARARGHLVVGAKEDQPYLGQKNPATGEYSGFDIEIARMVGADLGFAPERIEF 111 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISS 139 + + R ALQ+ Q+D R+ +G A + GQ ++ K I Sbjct: 112 RTIASANRETALQNGQVDYYVGTYTINDNRKKLVGFA--GPYFVAGQSLLVRKNETKIDG 169 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L+G +C AG+T + + I ++ + DA T D + Sbjct: 170 PQDLAGRKVCSAAGSTPYQRIQKNYPQA----KLIGYDTYSACVDNLITGQVDAVTTDNA 225 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L P E I S+ P + +GDT + A+ E G +K Sbjct: 226 ILQGYAA--KVPDELRIAGQPFSEEPYGIGVPKGDTALRLALDD---ALERHERDGDWKK 280 Query: 260 NINQVSKDTTNP 271 + + P Sbjct: 281 AYDATLGLSGVP 292 >gi|291302012|ref|YP_003513290.1| extracellular solute-binding protein family 3 [Stackebrandtia nassauensis DSM 44728] gi|290571232|gb|ADD44197.1| extracellular solute-binding protein family 3 [Stackebrandtia nassauensis DSM 44728] Length = 323 Score = 173 bits (438), Expect = 4e-41, Method: Composition-based stats. Identities = 50/255 (19%), Positives = 94/255 (36%), Gaps = 13/255 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSK 77 S S ++ + I G LK G++ A+G+ KGFDV R ++ + D K Sbjct: 72 SGSKSSDDIKRIVDAGVLKVGVDQTTNLMGYRDPASGNMKGFDVAIAREIAKELLGDEDK 131 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 IQ++ +N+K R AL+ +++D++ R R +G + Y Q ++ Sbjct: 132 IQFVTMNSKGRIPALKERKVDLVVRTMTMNCDRWKDIGFSAE--YYTAHQRVLVP-SSAS 188 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + L G +C +T+ + D KA P+ + + A + D Sbjct: 189 DDIDDLKGEKVCAAEDSTSLNRIRDDLKA-----KPVSAREWTDCMILLQQGDVAAMSTD 243 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-I 256 + L + + ++ +S P + D V+ T M G I Sbjct: 244 DTILAGMAAQDPN---TKVIGKDLSDEPYGIGANKEDVGLIKFVNKTLEDMGDDGTWGDI 300 Query: 257 TQKNINQVSKDTTNP 271 + + + P Sbjct: 301 YGEYLEEPLGKGKQP 315 >gi|82880401|gb|ABB92746.1| sensor protein FLII81PE [synthetic construct] Length = 753 Score = 173 bits (438), Expect = 4e-41, Method: Composition-based stats. Identities = 39/226 (17%), Positives = 86/226 (38%), Gaps = 9/226 (3%) Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTD 105 + +N G+ D+ A+ A+ +K ++ +P+ ++ R LQ+ D +T Sbjct: 264 LGSNQKVVGYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTT 323 Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165 + R+ + G + K I + L ++ V +GTT+E+ L + Sbjct: 324 NNVERQKQAAF--SDTIFVVGTRLLTKKGGDIKDFANLKDKAVVVTSGTTSEVLLNKLNE 381 Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225 M I + + + R A+ D + L + +P I+ S+ Sbjct: 382 EQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGKPQSQEA 441 Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + + D ++ ++ T + T+ E +K ++ K+ P Sbjct: 442 YGCMLRKDDPQFKKLMDDTIAQVQTSGE---AEKWFDKWFKNPIPP 484 Score = 44.9 bits (105), Expect = 0.017, Method: Composition-based stats. Identities = 9/32 (28%), Positives = 11/32 (34%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANG 54 S L I K G + G V F+ G Sbjct: 1 AGSTLDKIAKNGVIVVGHRESSVPFSYYDVAG 32 >gi|312963772|ref|ZP_07778243.1| extracellular solute-binding protein, family 3 [Pseudomonas fluorescens WH6] gi|311281807|gb|EFQ60417.1| extracellular solute-binding protein, family 3 [Pseudomonas fluorescens WH6] Length = 261 Score = 173 bits (438), Expect = 4e-41, Method: Composition-based stats. Identities = 55/269 (20%), Positives = 96/269 (35%), Gaps = 14/269 (5%) Query: 1 MYKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + + L L + A+ L DI RG LK + F V + +G Sbjct: 1 MTKRYSALLTALFASLMLSQAPAQANGLDDIVARGTLKVAVPQDFPPFGSVGPDMKPRGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D + L+ + K++ P+N+ R L + ++D++ + RE + + Sbjct: 61 DIDTAKLLADQL---KVKLELTPVNSTNRIPFLTTGKVDLVISSLGKNPEREKVIDFSKA 117 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 ++ ISS L G +I V G ++ L FE Sbjct: 118 YAPFY--LAVFGPPDAAISSTDDLKGKTISVTRGAIEDIELTAVAPKEA---TIKRFEDN 172 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AAY A + D + A+ + P L + SP+ + + + Sbjct: 173 NSTIAAYLAGQVDLIASGNVVMVAI--SERNPKRVPALKVKLKDSPVYVGVNKNEPALLE 230 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDT 268 V+ A A+ G +KN Q K+ Sbjct: 231 KVNQILVA---AKADGSLEKNAMQWLKEP 256 >gi|300715445|ref|YP_003740248.1| Cysteine transport protein [Erwinia billingiae Eb661] gi|299061281|emb|CAX58390.1| Cysteine transport protein [Erwinia billingiae Eb661] Length = 261 Score = 173 bits (438), Expect = 4e-41, Method: Composition-based stats. Identities = 45/262 (17%), Positives = 99/262 (37%), Gaps = 11/262 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K ++++ ++ A L DI+KRG L+ + F V + +G+D+ Sbjct: 1 MKKALLAMVGAALMLTQVTQAMADQLQDIEKRGVLRVAVPQDFPPFGSVGTDLQPQGYDI 60 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D + L+ + K+Q +P+ + R LQ+ ++D++ + RE + + Sbjct: 61 DMAKYLAKQM---KLKLQLVPVTSANRVPYLQTDKVDLVISSMGKNPEREKVIAFSRAYA 117 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 +F G K + + LSG +I V G ++ L D +E Sbjct: 118 PFF--LGVFGPKDAQLKDAAALSGKTIGVTRGAVEDMVLTDVAPK---DTQLKRYEDNNT 172 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +AY + + + A+ N + + ++ SP + + + V Sbjct: 173 TLSAYLSGQVQYVATGNLVVAAIARQNADKA--PVAKFMLKDSPCFIGMRKDEPALKTKV 230 Query: 242 SWTHYAMVTAEEL-GITQKNIN 262 + + L G++++ + Sbjct: 231 DALIEQAIKDKTLNGLSEEWLK 252 >gi|325062715|gb|ADY66405.1| amino acid ABC transporter, substrate binding protein [Agrobacterium sp. H13-3] Length = 300 Score = 173 bits (438), Expect = 4e-41, Method: Composition-based stats. Identities = 45/280 (16%), Positives = 102/280 (36%), Gaps = 13/280 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS---ILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M + +L + L T + + + L I + G ++ G + F+ + + Sbjct: 1 MQRSTLWLMLGVFSLLPTIAAADETQPPTLETIARTGTIRLGFADRNLPFSYMGIGPEPI 60 Query: 58 GFDVDFCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ ++ C ++ + KI ++ R L ID+ + T R + Sbjct: 61 GYSIELCLKVADSIKKKLGLPELKIDFVKRTPSNRITLLNDGTIDMECVASTNTEERRKA 120 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + ++ + G ++ K ++SVS L+G ++ V GT L + + Sbjct: 121 VWFSYS--HFITGTRYVALKSSNMTSVSDLAGRTVVVTTGTINISQLNVLNRKLGLNIAV 178 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS-KSPLAPAIIQ 232 + + E R A+ D L + +P ++ I + ++ P + + Sbjct: 179 LQNDSTEGSFDMVTEDRASAFVMDDILLRSFVAETGKPEDYSISNEYLAPPQPYGLMLRR 238 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272 GDT + N V+ + + E+ ++ P+ Sbjct: 239 GDTAFKNAVNEALGKIYASGEIN---AIYDKWFNAPIPPN 275 >gi|84497113|ref|ZP_00995935.1| putative transporter substrate-binding protein [Janibacter sp. HTCC2649] gi|84382001|gb|EAP97883.1| putative transporter substrate-binding protein [Janibacter sp. HTCC2649] Length = 324 Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats. Identities = 52/233 (22%), Positives = 92/233 (39%), Gaps = 9/233 (3%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIF 72 L S +AS +G IK RG L G++ G +GFD+D + ++ AI Sbjct: 63 ALPAPSGIPSASTMGKIKARGRLIAGVSADTRLLGSRNPLLGRIEGFDIDLVQQIADAIL 122 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 +K++ + A +R LQ+ Q+D++ RN T R ++ + Y GQ ++ Sbjct: 123 GPNAKVELRVITAADRLPVLQNHQVDVVVRNMTITCDRWKTIAFSAE--YYRAGQKILIR 180 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 K I+ ++ L+G +C GT++ L + E + + + Sbjct: 181 KGSTITGLASLAGKRVCAPTGTSSLDNLVRLAPKAI----AVPATTHTECLVNLQQGKVE 236 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 A TGD + L L + P V+ + P I + V+ Sbjct: 237 AITGDDTVLAGLA--SQDPYAVVLSEKAFTAEPYGVGIAADQVDLVKFVNTVL 287 >gi|327399612|ref|YP_004340481.1| ABC transporter periplasmic subunit family 3 [Hippea maritima DSM 10411] gi|327182241|gb|AEA34422.1| ABC-type transporter, periplasmic subunit family 3 [Hippea maritima DSM 10411] Length = 275 Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats. Identities = 64/282 (22%), Positives = 112/282 (39%), Gaps = 25/282 (8%) Query: 1 MYK--DFFVSILCLIIL-FFTSFST-----NASILGDIKKRGFLKCGINTGLVGFAEVKA 52 M + F V ++ L +L FTS + + S L I+KRG L+ G+N G + F Sbjct: 1 MKRLFGFLVFVVSLFMLVSFTSRAADINLWHNSTLYKIQKRGVLRVGLNAGYMPFEMRSK 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G GFDVD + ++ A+ K++ + + AL + + DI+ T R + Sbjct: 61 TGKIIGFDVDMAKLMAKAMG---VKLKIVNTDWDGIIPALMTNKFDIIMSGMTITQKRNL 117 Query: 113 SLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGA--SICVQAGTTTELTLADYFKAHN 168 + A GQ +++KK I S L+ ++ V GTT + Y Sbjct: 118 KVNFAD--PYIVVGQTVLVNKKWAGKIKSYKDLNDPKFTVTVMLGTTGDFAAKKYISKA- 174 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 F+ EE R DA+ D ++ +N + + L + PL Sbjct: 175 ---KIQEFQTEEEAVMQVMQGRADAFVYDKP-YESIFYSNKGKGKLIFLDKPFTYEPLGW 230 Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 AI +GD ++ +W + + + G K + + + Sbjct: 231 AINKGDPDFL---NWLNNFLRQIKHDGTYDKVYKKWFVNVKD 269 >gi|187922932|ref|YP_001894574.1| extracellular solute-binding protein family 3 [Burkholderia phytofirmans PsJN] gi|187714126|gb|ACD15350.1| extracellular solute-binding protein family 3 [Burkholderia phytofirmans PsJN] Length = 267 Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats. Identities = 48/258 (18%), Positives = 95/258 (36%), Gaps = 11/258 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + + ++L +L + + +A L +I K G LK + F V A+ +G+D+ Sbjct: 10 RRAWLAALLLSPVLAVNAPAAHADTLDNIAKAGVLKVAVPEDYPPFGSVGADMKPQGYDI 69 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D L+ ++ K++ +P+N+ R LQ+ ++D++ + T RE + + Sbjct: 70 DTAALLAKSM---NVKLELVPVNSANRIPYLQTGKVDLVISSLGKTPDREKVIDFSTAYA 126 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y+ QG +S + L+G ++ G E+ L +K FE Sbjct: 127 PYY--QGVFGPADIKVSGPADLTGKTVGATRGALEEIGLTQMAPNATIK----RFEDNNA 180 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 AA+ + + A+ P +I SP + + + V Sbjct: 181 TIAAFLSGQVQLIAAGNIVAAAILA--KNPPRRPEPKFVIKNSPCFVGMNKNEPRLQQKV 238 Query: 242 SWTHYAMVTAEELGITQK 259 + L K Sbjct: 239 NAAIAQAKQDGTLNTMSK 256 >gi|117619722|ref|YP_857305.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117561129|gb|ABK38077.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 283 Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats. Identities = 58/273 (21%), Positives = 103/273 (37%), Gaps = 21/273 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +S L L L + + S L + +RG L+ G + G F G + GFD Sbjct: 22 MIKKLILSTLLLCGL---ANAAPTSTLDAVLERGVLRVGFDAGYQPFEMTNKQGQYIGFD 78 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + ++ + K++++ AL + + D++ T R + + A Sbjct: 79 VDLAKMVAKEMG---VKVEFVNTAWDGIIPALLTDKFDVIMGGMTVTPQRNLRVNFAD-- 133 Query: 121 ITYFDGQGFIMHKKKG--ISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVF 176 GQ ++ K K I S + L+ I V+ GTT E + + F Sbjct: 134 PYIVVGQTIVLRKDKAGEIKSFTDLNDPKYKIAVKLGTTGEQAVKRLIPKA----TLLQF 189 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E ++ + DA+ D+ Y V L + PLA AI +GD Sbjct: 190 ETQDDAKLEVINGKVDAFVYDLP--YNAIFATQNKGAVVHLDKPFTFEPLAWAIRKGDQ- 246 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 + ++W + + + G + + + T Sbjct: 247 --DTLNWFNNYLRQIKGDGSYDRLYQKWFESTA 277 >gi|317405100|gb|EFV85446.1| solute-binding protein [Achromobacter xylosoxidans C54] Length = 273 Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats. Identities = 55/277 (19%), Positives = 105/277 (37%), Gaps = 15/277 (5%) Query: 1 MYK-DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKG 58 M + V+ L L L + A + DIK RG L CG F+ A G Sbjct: 1 MKRHSLIVACLGLAALSLGAG-ARADQVADIKARGELICGTLGTSQPFSFQDAATRQLVG 59 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 +DVD C+ ++ + K+ Y L+ R L ++DIL+ N ++ R + + Sbjct: 60 YDVDVCKLVADKLG---VKVSYKLLSVAARVPELNEGRVDILAANLGYSPDRAEQIAFSH 116 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y Q ++ K G+ ++ L+G + G+++E + K I + Sbjct: 117 A--YYVSPQKLLVRKDSGLDTIESLNGRRVGATKGSSSEREIKRIL----DKSQVIGYGD 170 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 A + + DA L L L + + ++ + P + + + Sbjct: 171 SSATYLALQQKKVDAQFASELVLVRLVLQSPPTAPVSVIAKSVFDEPWGLGVRKSEPGML 230 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 +V+ A+ AE G+ + ++ T ++R Sbjct: 231 AVVN---QALDEAESSGVAAQLFDKWFGAQTPYKLER 264 >gi|319948590|ref|ZP_08022716.1| glutamine-binding protein GlnH [Dietzia cinnamea P4] gi|319437740|gb|EFV92734.1| glutamine-binding protein GlnH [Dietzia cinnamea P4] Length = 359 Score = 172 bits (437), Expect = 5e-41, Method: Composition-based stats. Identities = 55/251 (21%), Positives = 101/251 (40%), Gaps = 16/251 (6%) Query: 29 DIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 I +RG L G++ G F+ A+G GFDVD R +++ IF DP ++++ L + Sbjct: 110 RILQRGRLIVGLDQGSNLFSFRDPASGQLTGFDVDLAREIAADIFGDPRQVEFRSLTSAN 169 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 R AL++ Q+D++ R+ T R + Y Q + + GI+ + L G Sbjct: 170 RLEALENDQVDVVIRSMSITCARRERVTF--SVPYYQAYQRVLTVRGSGITEIEHLEGKR 227 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 +CV AGTT+ L A + + + A + ++ DA T D + L + Sbjct: 228 VCVAAGTTSASRLW----AELERITVLSVNTWADCLVAIQQNQVDAITTDDAILVGITAQ 283 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTE-----WYNIVSWTHYAMVTAEELG-ITQKNI 261 + I+ + P I + E V+ T + + + Sbjct: 284 DP---YLQIVGPQLDAEPYGVGIAKSTPENNTDGLVRQVNSTLERIRADGTWNRMYSTWL 340 Query: 262 NQVSKDTTNPD 272 + + + P+ Sbjct: 341 SGLGPNPGMPE 351 >gi|304386276|ref|ZP_07368609.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Pediococcus acidilactici DSM 20284] gi|304327633|gb|EFL94860.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Pediococcus acidilactici DSM 20284] Length = 277 Score = 172 bits (437), Expect = 6e-41, Method: Composition-based stats. Identities = 44/285 (15%), Positives = 100/285 (35%), Gaps = 23/285 (8%) Query: 1 MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVK- 51 M + F + L L + F + ++ L G+ F + Sbjct: 1 MRRRFKMLFLGLTAVLFLGILGGCTKQEAKQRDAWQTAQQTKTLTWGVKADTKLFGLMDV 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 + KGFD+D +AL+ + ++ +++ + ++ R L++ +D + T R+ Sbjct: 61 KDSQIKGFDIDIAKALTKQMLGKDARAEFVQVTSQTRIPLLKNGNLDAVIATMTITKDRQ 120 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNM 169 + + + GQ ++ K I SV L+ G + G + + + Sbjct: 121 KVVDFSDS--YFDAGQSLLVPKDSKIHSVKDLNHPGTKVIGVVGANSVSNVKKFAPKAQ- 177 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 I + + A ++ + A T D L+ + + N + ++ +K P A Sbjct: 178 ---VIQLQDYAQALTALKSGQGAALTTDNGILFGMAVDNP---QFKVVGKAFTKEPYGIA 231 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 I Q ++ ++ E + I + D + + Sbjct: 232 INQNQPALKKHLNQALEEIIANGE---YNRLIKKWFGDIPGFNYR 273 >gi|295675752|ref|YP_003604276.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] gi|295435595|gb|ADG14765.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] Length = 302 Score = 172 bits (437), Expect = 6e-41, Method: Composition-based stats. Identities = 50/245 (20%), Positives = 90/245 (36%), Gaps = 11/245 (4%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 L F + + +A L +I K G LK + F V A+ +G+D+D L+ A+ Sbjct: 58 LAFHAGAAHADTLDNIAKTGVLKVAVPEDYPPFGSVGADMKPQGYDIDTAALLAKAM--- 114 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 K++ +P+N+ R LQ+ ++D++ + T RE + + Y+ QG Sbjct: 115 NVKLELVPVNSANRIPYLQTGKVDLVISSLGKTPEREKVIDFSSAYAPYY--QGVFGPAD 172 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 +S + L+G ++ G E+ L +K FE AA+ + + Sbjct: 173 IKVSGPADLTGKTVGATRGALEEIGLTQMAPNATIK----RFEDNNATIAAFLSGQVQLI 228 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 A+ P +I SP + + + V L Sbjct: 229 AAGNIVAAAILA--KNPPRRPEPKFVIKNSPCFVGMNKNEPRLQQKVDAAIAQAKHDGTL 286 Query: 255 GITQK 259 G K Sbjct: 287 GAMSK 291 >gi|182435043|ref|YP_001822762.1| putative glutamate ABC transporter substrate-binding protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326775559|ref|ZP_08234824.1| ABC-type transporter, periplasmic subunit family 3 [Streptomyces cf. griseus XylebKG-1] gi|178463559|dbj|BAG18079.1| putative glutamate ABC transporter substrate-binding protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326655892|gb|EGE40738.1| ABC-type transporter, periplasmic subunit family 3 [Streptomyces cf. griseus XylebKG-1] Length = 309 Score = 172 bits (437), Expect = 6e-41, Method: Composition-based stats. Identities = 52/251 (20%), Positives = 98/251 (39%), Gaps = 13/251 (5%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 + KKRG+L G E A+G + GFD++ R +++++ +P I++ Sbjct: 57 ESRTWTKAKKRGYLVVGAKEDQPYLGEKDPASGIYSGFDIEIARMMAASLGFEPKTIRFR 116 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSV 140 + + R ALQ+ QID +R+ +G A Y GQG ++ + I Sbjct: 117 TIASANRETALQNGQIDYYVGTYTINDMRKKLVGFA--GPYYMAGQGLLVRTDENDIHGP 174 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L+G ++C AG+T +A + + ++ ++ DA T D + Sbjct: 175 QDLAGKTVCSAAGSTPYQRIAADYPKA----TLVAYDTYSICVDNLLTYQVDAVTTDDAI 230 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L P E ++ S+ P + + D + ++ A E+ G +K Sbjct: 231 LLGFAAKA--PDEMKVVGKPFSQEPYGIGVPRDDNALRDALNDALEAN---EKNGNWKKA 285 Query: 261 INQVSKDTTNP 271 + P Sbjct: 286 YEATLGLSGAP 296 >gi|152970318|ref|YP_001335427.1| cysteine ABC transporter periplasmic substrate binding protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206576516|ref|YP_002238435.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Klebsiella pneumoniae 342] gi|238894802|ref|YP_002919536.1| cysteine ABC transport system periplasmic substrate-binding component [Klebsiella pneumoniae NTUH-K2044] gi|262044440|ref|ZP_06017501.1| amino acid ABC superfamily ATP binding cassette transporter [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|290509459|ref|ZP_06548830.1| polar amino acid transport system substrate-binding protein [Klebsiella sp. 1_1_55] gi|330010551|ref|ZP_08306784.1| ABC transporter, substrate-binding protein, family 3 [Klebsiella sp. MS 92-3] gi|150955167|gb|ABR77197.1| cysteine transport protein (ABC superfamily, peri_bind) [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206565574|gb|ACI07350.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Klebsiella pneumoniae 342] gi|238547118|dbj|BAH63469.1| cysteine ABC transport system periplasmic substrate-binding component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259038220|gb|EEW39430.1| amino acid ABC superfamily ATP binding cassette transporter [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|289778853|gb|EFD86850.1| polar amino acid transport system substrate-binding protein [Klebsiella sp. 1_1_55] gi|328534488|gb|EGF61076.1| ABC transporter, substrate-binding protein, family 3 [Klebsiella sp. MS 92-3] Length = 261 Score = 172 bits (437), Expect = 6e-41, Method: Composition-based stats. Identities = 47/262 (17%), Positives = 98/262 (37%), Gaps = 11/262 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K +++ L + + A L DI+KRG ++ + F V + +G+D+ Sbjct: 1 MKKLLIALAGAACLLSSVSAAQADQLQDIEKRGVIRIAVPQDFPPFGSVGTDLQPQGYDI 60 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D R L+ ++ K+Q +P+ + R LQ+ ++D++ + RE + + Sbjct: 61 DMARYLAKSM---KLKLQLVPVTSANRVPYLQTDKVDLVISSLGKNAEREKVIDFSRAYA 117 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 +F G K + + LSG SI V G ++ L +E Sbjct: 118 PFF--LGVFGPKGAELKDAAALSGKSIGVTRGAVEDMVLTSVAPQAA---QIKRYEDNNT 172 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +AY + + + A+ N + + ++ SP + + + V Sbjct: 173 TLSAYLSGQVQYVATGNLVVAAISRQNADKA--PVPSFMLKDSPCFIGLKKNEPALKAKV 230 Query: 242 SWTHYAMVTAEEL-GITQKNIN 262 + L G+++K + Sbjct: 231 DTLIEQGIKDGTLNGLSEKWLK 252 >gi|318059839|ref|ZP_07978562.1| glutamate binding periplasmic protein [Streptomyces sp. SA3_actG] gi|318077304|ref|ZP_07984636.1| glutamate binding periplasmic protein [Streptomyces sp. SA3_actF] Length = 354 Score = 172 bits (437), Expect = 6e-41, Method: Composition-based stats. Identities = 49/251 (19%), Positives = 93/251 (37%), Gaps = 13/251 (5%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 +++ + RG L G E A+G + GFD++ + +++ + ++I + Sbjct: 102 DSATWRKARARGRLVVGAKEDQPYLGEKDPASGRYSGFDIEIAKMVAAGLGFPANRISFR 161 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSV 140 + + R +LQ+ QID R+ +G A Y GQG ++ K GI Sbjct: 162 TIASANRETSLQNGQIDYYVGTYTINDNRKKLVGFA--GPYYMAGQGLLVRKDEDGIKGP 219 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + L G +C AG+T + + + + ++ ++ DA T D S Sbjct: 220 ADLDGKRVCSAAGSTPYQRIQHDYPKAD----LVSYDTYSICVDNLLTYQVDAVTTDDSI 275 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L P E ++ S+ P + + D + A E G +K Sbjct: 276 LLGYAA--KVPEELKVVGKPFSEEPYGIGVPRKDNALRLAIDGILAAR---ERDGTWKKA 330 Query: 261 INQVSKDTTNP 271 + + P Sbjct: 331 YDATLGLSGVP 341 >gi|15888714|ref|NP_354395.1| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|15156456|gb|AAK87180.1| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 261 Score = 172 bits (437), Expect = 6e-41, Method: Composition-based stats. Identities = 49/261 (18%), Positives = 95/261 (36%), Gaps = 11/261 (4%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + ++I + + S + A LGDI RG ++ + F V + +G+D+D Sbjct: 4 RRLLLAIAAVSVTLGFSPAAFADALGDISSRGTIRVAVPQDFPPFGSVGTDMAPQGYDID 63 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + + K++ +P+ + R LQ+ ++D++ + RE + + Sbjct: 64 VANLIGEKLG---VKVELVPVTSANRVPYLQTNKVDLVISSLGKNPDREKVIDFSTAYAP 120 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 +F+G ++ LSG +I V G +L L A +E Sbjct: 121 FFNG--VFAPDSVTVAKAEDLSGKTIGVTRGAVEDLELTKVAPA---DTTIKRYEDNNGT 175 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 +A+ A + +A A+ P + L +I SP + + V+ Sbjct: 176 ISAFLAGQVEAVATGNVVAAAILA--KNPPKRPELKFLIKNSPCYIGLNKEQPALLEKVN 233 Query: 243 WTHYAMVTAEELG-ITQKNIN 262 T L I QK + Sbjct: 234 AIIATAKTDGSLNTIAQKWLK 254 >gi|111223300|ref|YP_714094.1| putative ABC transporter glutamine-binding protein GlnH [Frankia alni ACN14a] gi|111150832|emb|CAJ62536.1| putative ABC transporter glutamine-binding protein GlnH [Frankia alni ACN14a] Length = 350 Score = 172 bits (436), Expect = 7e-41, Method: Composition-based stats. Identities = 48/237 (20%), Positives = 89/237 (37%), Gaps = 11/237 (4%) Query: 18 TSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDP 75 T + A L I++RG+L+ + + F + A G ++GFDVD + AIF Sbjct: 95 TPGAMPAGTFLATIQQRGYLRAAVLADVPPFGSINAFTGQFEGFDVDLANRIGRAIFGTD 154 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 +++ ER L +DI+ R + + +++ Q ++ Sbjct: 155 GHVRFRATTYAERIPVLTHGDVDIVVATMTTNCERRRQIDF--STVYWYETQRVLVPLGS 212 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 S+ L G +C AGTTT TL + + + + ++ + T Sbjct: 213 PARSLDDLGGQPVCTAAGTTTVDTL----RRTSSHPVVRTVPNIADCLVLLQSGQVAGIT 268 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 + L + P H++ P +S P A + +G E V+ +V Sbjct: 269 TTSAVLAGMAAQ--DPRVHLVGP-GLSNEPDAIGVARGHPELTRFVNGVLADVVRDG 322 >gi|262047081|ref|ZP_06020040.1| glutamine-binding protein [Lactobacillus crispatus MV-3A-US] gi|312984301|ref|ZP_07791645.1| glutamine-binding protein [Lactobacillus crispatus CTV-05] gi|260572658|gb|EEX29219.1| glutamine-binding protein [Lactobacillus crispatus MV-3A-US] gi|310894319|gb|EFQ43397.1| glutamine-binding protein [Lactobacillus crispatus CTV-05] Length = 272 Score = 172 bits (436), Expect = 7e-41, Method: Composition-based stats. Identities = 39/257 (15%), Positives = 92/257 (35%), Gaps = 13/257 (5%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + ++ +K+ + G+ F G +GF++D +AL+ + +K + Sbjct: 27 ASNNVYQKVKESKTIVWGVRADTRLFGLTNIKTGHIEGFEIDLAKALTKQMLGKDAKTDF 86 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + A R L++ +D + T R + + G ++ I +V Sbjct: 87 VTTTANTRIPLLKNGNVDAVLATMTITPERAKQVTF--SKPYFPAGSSLLVPNNSKIKNV 144 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L G ++ GTT + Y + ++ + +A +A++ A T D Sbjct: 145 KDLEGKTVLAVKGTTAVDDVHKYAPKA----RILQYDDYGQAMSALKANQGVALTTDNGL 200 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L + N + ++ + S +P A+ +G + + + ++ G + Sbjct: 201 LAGIAQENPG---YKLVGGVYSNAPYGIAVNKGQKQMADHIDQALN---ELQKNGTYDRL 254 Query: 261 INQVSKDTTNPDVQRFL 277 I + ++ L Sbjct: 255 IKKWFAGIPGFSLKGVL 271 >gi|86360893|ref|YP_472780.1| amino acid ABC transporter substrate-binding protein [Rhizobium etli CFN 42] gi|86284995|gb|ABC94053.1| probable amino acid ABC transporter, substrate-binding protein [Rhizobium etli CFN 42] Length = 261 Score = 172 bits (436), Expect = 7e-41, Method: Composition-based stats. Identities = 52/285 (18%), Positives = 100/285 (35%), Gaps = 25/285 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + F +I L F + ++A L DI RG L+ + F V + G+D Sbjct: 2 LTRRIFFAIATLAATFGFNAPSHADALADITARGTLRVAVPQDFPPFGSVGTDMAPMGYD 61 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D ++ + K + +P+ + R LQ+ ++D++ + RE + + Sbjct: 62 IDMANLIAEKLG---VKAELVPVTSANRVPYLQTNKVDLVISSLGKNPEREKVIDFSVAY 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +F+G ++ L+G SI V G +L L A +E Sbjct: 119 APFFNG--VFGPADLSVAKAEDLAGKSIGVTRGAVEDLELTKIAPA---DATIKRYEDNN 173 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +A+ + + D A+ P + L +I SP + + + Sbjct: 174 GTISAFLSGQVDIIATGNVVAAAILA--KNPPKRPELKFLIKNSPCYIGLNKEQSALLEK 231 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNI 285 V+ A L Q++LG D S++ Sbjct: 232 VNGIVAAAKADGTLNAIS---------------QKWLGADLPSDL 261 >gi|199599083|ref|ZP_03212489.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus rhamnosus HN001] gi|258509003|ref|YP_003171754.1| ABC transporter amino acid-binding periplasmic protein [Lactobacillus rhamnosus GG] gi|199590046|gb|EDY98146.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus rhamnosus HN001] gi|257148930|emb|CAR87903.1| ABC transporter, amino acid-binding periplasmic protein [Lactobacillus rhamnosus GG] gi|259650296|dbj|BAI42458.1| amino acid ABC transporter substrate binding component [Lactobacillus rhamnosus GG] Length = 274 Score = 172 bits (436), Expect = 7e-41, Method: Composition-based stats. Identities = 50/255 (19%), Positives = 94/255 (36%), Gaps = 14/255 (5%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + IL + K + G+ F + G +GFDVD +A++ I Q Sbjct: 29 ADRDILANAKATNTIIWGVKADTRLFGLMNIKTGKIEGFDVDMAKAITKQILGKKGNAQL 88 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + + + R ++ +D + T R+ L F + + GQ ++ K I SV Sbjct: 89 VQVTSDTRVPMIKGGNLDAVIATMTITPERQK--ILDFSDVYFNAGQSLLVKKGSPIKSV 146 Query: 141 SQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L G + G+ + D K + + A ++ + DA T D Sbjct: 147 KDLKKGTKVIGVQGSNSV----DNVKKAAPDTTVLQLADYAQAFTALKSGQGDALTTDNG 202 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 LY + + +++ +K P AI +G + N V+ A+ ++ G K Sbjct: 203 ILYGMSEQDKN---YIVTGGTFTKEPYGIAINKGQKPFVNAVN---KAIKQLKQNGTYAK 256 Query: 260 NINQVSKDTTNPDVQ 274 I + D ++ Sbjct: 257 LIKKWFGDVPGFSLK 271 >gi|163759017|ref|ZP_02166103.1| probable amino acid ABC transporter, substrate-binding protein [Hoeflea phototrophica DFL-43] gi|162283421|gb|EDQ33706.1| probable amino acid ABC transporter, substrate-binding protein [Hoeflea phototrophica DFL-43] Length = 262 Score = 172 bits (436), Expect = 8e-41, Method: Composition-based stats. Identities = 52/264 (19%), Positives = 110/264 (41%), Gaps = 11/264 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + L L + + L DI + G +K GI F + A G+++G+D Sbjct: 1 MLNKLRTATLALCVATVGFAGAAHAELSDILEAGTIKIGIPESFPPFGSLGAEGEYEGYD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + ++ + D I+ +P+ +K+R L++ ++D++ + R S+ + Sbjct: 61 VDVAKLIAEDLGID---IELVPVTSKQRIPFLETDRVDLIISSMGANPERAKSIWFSSAY 117 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +F G ISS++ L+G + V G+ ++ L + I F Sbjct: 118 APFFSGA--FASTDMAISSMADLAGKKVGVTGGSLEDIELTENSPE---GTEIIRFGDNA 172 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +AY + + D + A +++ D P + II +SP + +G+ + Sbjct: 173 ATLSAYVSGQVDVLVTGNTV--AAQVSADNPDLSMETKFIIKESPAFIGVKKGNVDLLQW 230 Query: 241 VS-WTHYAMVTAEELGITQKNINQ 263 V+ + + + + ++K + Q Sbjct: 231 VNVFILHKKLGGQLNAFSEKWLGQ 254 >gi|323467040|gb|ADX70727.1| Glutamine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus helveticus H10] Length = 272 Score = 171 bits (435), Expect = 9e-41, Method: Composition-based stats. Identities = 42/265 (15%), Positives = 95/265 (35%), Gaps = 13/265 (4%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIF 72 L N ++ +K+ + G+ F G +GF++D AL+ + Sbjct: 19 ALIACGKRNNQNVYQKVKESKHIIWGVRADTRLFGLTNVKTGKIEGFEIDLAHALTKQML 78 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 + ++ A R L++ ID + T R + + G ++ Sbjct: 79 GKDATASFVTTTANTRIPLLKNGNIDAVLATMTITPERAKQVDF--SKPYFPAGSSLLVP 136 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 I +V L+G ++ GTT + + + ++ + +A +A++ Sbjct: 137 DNSKIKNVKDLNGETVLAVKGTTAVDDVHKFAPKA----RVLQYDDYGQAMSALKANQGV 192 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 A T D L + N + ++ + + +P A+ +G ++V + A+ E Sbjct: 193 ALTTDNGLLAGIAQENPG---YKLVGGVYNNAPYGIAVNKGQ---KDMVDHINKALDQLE 246 Query: 253 ELGITQKNINQVSKDTTNPDVQRFL 277 + G + I + ++ L Sbjct: 247 KNGTYDRLIKKWFAGIPGFSLKGVL 271 >gi|298492610|ref|YP_003722787.1| family 1 extracellular solute-binding protein ['Nostoc azollae' 0708] gi|298234528|gb|ADI65664.1| extracellular solute-binding protein family 3 ['Nostoc azollae' 0708] Length = 292 Score = 171 bits (435), Expect = 9e-41, Method: Composition-based stats. Identities = 49/249 (19%), Positives = 94/249 (37%), Gaps = 13/249 (5%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 + ILCL L T + + L +I+KRG+L + L G+ +G ++D + Sbjct: 32 LILILCLFSLG-TDLVASGATLPEIQKRGYLTVAVKDNLRPLGFRDDKGNLQGLEIDLAK 90 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 L++ + P +++ P+ +R + +ID+ N T R + Y+D Sbjct: 91 RLANDLLGKPDAVKFQPVANSDRLPVIVENKIDLAIANVTATESRSRIVSF--SVPYYYD 148 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 G + K I+ + L I V ++T + + K I + Sbjct: 149 GAAI-VTKDTSINQLEDLYRRKIAVLNNSSTIFYVKYFIP----KSELIGVSSYAQAQEK 203 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ--GDTEWYNIVSW 243 ++ DA+ D S L + + ILP +S PL+ + + E+ V+ Sbjct: 204 IESNAVDAFAADNSLLSGWVQEYPK---YHILPSQLSTEPLSVVMAKGLQYDEFRRSVNE 260 Query: 244 THYAMVTAE 252 + Sbjct: 261 AIARYIATG 269 >gi|328886196|emb|CCA59435.1| Glutamate-binding protein of ABC transporter system [Streptomyces venezuelae ATCC 10712] Length = 305 Score = 171 bits (435), Expect = 9e-41, Method: Composition-based stats. Identities = 52/251 (20%), Positives = 93/251 (37%), Gaps = 13/251 (5%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 ++S KKRG L G E A G + GFD++ + +++++ DP+ I + Sbjct: 53 DSSTWNRAKKRGHLVVGAKEDQPYMGERDPATGRYSGFDIEIAKMMAASLGFDPAGISFR 112 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSV 140 + + R ALQ+ QID R+ +G A Y GQ ++ + I Sbjct: 113 TIASANRETALQNGQIDYYVGTYTINDNRKKLVGFA--GPYYLAGQSLLVRTDENDIHGP 170 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L+G +C AG+T + + + ++ ++ DA T D + Sbjct: 171 QDLAGKRVCSAAGSTPYQRIQKDYPKA----ELVAYDTYSACVDNLLTYQVDAVTTDDTI 226 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L P E ++ SK P + + D + A E+ G +K Sbjct: 227 LMGYAA--KVPDELKVVGKPFSKEPYGIGVPRNDNALRFALDDALAAH---EKNGDWKKA 281 Query: 261 INQVSKDTTNP 271 + + P Sbjct: 282 YDATLGLSGVP 292 >gi|190894698|ref|YP_001984991.1| putative amino acid ABC transporter substrate-binding protein [Rhizobium etli CIAT 652] gi|218511056|ref|ZP_03508934.1| probable amino acid ABC transporter, substrate-binding protein [Rhizobium etli Brasil 5] gi|218517081|ref|ZP_03513921.1| probable amino acid ABC transporter, substrate-binding protein [Rhizobium etli 8C-3] gi|190700359|gb|ACE94441.1| probable amino acid ABC transporter, substrate-binding protein [Rhizobium etli CIAT 652] gi|327192281|gb|EGE59246.1| putative amino acid ABC transporter, substrate-binding protein [Rhizobium etli CNPAF512] Length = 261 Score = 171 bits (435), Expect = 1e-40, Method: Composition-based stats. Identities = 52/285 (18%), Positives = 100/285 (35%), Gaps = 25/285 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + F +I L F + ++A L DI RG L+ + F V + G+D Sbjct: 2 LTRRVFFAIATLAATFGFNAPSHADALADITARGTLRVAVPQDFPPFGSVGTDMAPMGYD 61 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D ++ + K + +P+ + R LQ+ ++D++ + RE + + Sbjct: 62 IDMANLIAEKLG---VKAELVPVTSANRVPYLQTNKVDLVISSLGKNPDREKVIDFSVAY 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +F+G ++ L+G SI V G +L L +E Sbjct: 119 APFFNG--VFAPADLAVAKAEDLAGKSIGVTRGAVEDLELTKIAP---TDATIKRYEDNN 173 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +A+ + + D A+ P + L +I SP + + + Sbjct: 174 GTISAFLSGQVDIIATGNVVAAAILA--KNPPKRPELKFLIKNSPCYIGLNKEQSALLEK 231 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNI 285 V+ A T L Q++LG D S++ Sbjct: 232 VNGIIAAAKTDGTLNAIS---------------QKWLGADLPSDL 261 >gi|290963272|ref|YP_003494454.1| amino acid ABC transporter substrate-binding protein [Streptomyces scabiei 87.22] gi|260652798|emb|CBG75931.1| putative amino acid ABC transporter solute-binding protein [Streptomyces scabiei 87.22] Length = 274 Score = 171 bits (435), Expect = 1e-40, Method: Composition-based stats. Identities = 50/259 (19%), Positives = 91/259 (35%), Gaps = 15/259 (5%) Query: 1 MYKDFFVSILCLIILFFTSFS------TNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M K + L I+ ++ + T +S+L K R L G+ G G Sbjct: 1 MSKRLISAALTSAIVVLSASACTSSDDTGSSVLDAAK-RDKLVIGVKADQPGLGLRTPEG 59 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + GFD+D ++ + D I + + R LQ Q+D++ R+ + Sbjct: 60 TFTGFDIDVATYVAKELGVDKKDITFKEAVSANREAFLQQGQVDMVVATYSINDARKEKV 119 Query: 115 GLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 A GQ ++ K K I+ L+G +C AG+T+ + + + Sbjct: 120 SFA--GPYLVAGQDLLVRKDNKDITGPESLNGKKLCSVAGSTSAQLIKEKYAE---DAQL 174 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + + DA T D S LY P + +L S+ + + Sbjct: 175 QEERTYSACVDRVLSGQLDAVTTDNSILYGYAAQ--HPGKLKVLDSPFSQENYGIGLKKD 232 Query: 234 DTEWYNIVSWTHYAMVTAE 252 D + V+ M++ Sbjct: 233 DKKGREAVNDALAKMMSDG 251 >gi|227512774|ref|ZP_03942823.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding protein [Lactobacillus buchneri ATCC 11577] gi|227522898|ref|ZP_03952947.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding protein [Lactobacillus hilgardii ATCC 8290] gi|227083974|gb|EEI19286.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding protein [Lactobacillus buchneri ATCC 11577] gi|227089927|gb|EEI25239.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding protein [Lactobacillus hilgardii ATCC 8290] Length = 277 Score = 171 bits (435), Expect = 1e-40, Method: Composition-based stats. Identities = 52/285 (18%), Positives = 109/285 (38%), Gaps = 23/285 (8%) Query: 1 MYKDF-----FVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVK- 51 M K V++L +++ ST+ +L D K+ + G+ F + Sbjct: 1 MRKILSRVGLVVALLIMVVSLGACSSTSGSKRDVLKDDKQSNTITWGVKADTKLFGLMDV 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 + KGF+VD +A++ I K +++ + ++ R L + ID + T R Sbjct: 61 KDNQIKGFEVDLAKAMTKEILGKKGKARFIQVTSQTRMPLLANGNIDAIMATMTITPQRA 120 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNM 169 + + + GQ ++ I +V L GA + G+ + + + Sbjct: 121 EQVDFSRS--YFDAGQAILVKDGSPIKNVRSLNRKGAVVLGVVGSNSVQNIKKFAPKA-- 176 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + + A ++ + DA T D LY + + N + ++ +K P A Sbjct: 177 --RVLQLSDYSQALTALKSGQGDALTTDNGILYGMSIENPG---YSVVGGTFTKEPYGIA 231 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 +G ++N ++ +A+ E G K I + + D++ Sbjct: 232 TAKGQRPFHNAIN---HALTKVENSGEYNKLIYKWFHNVKGFDMK 273 >gi|191638947|ref|YP_001988113.1| Glutamine ABC transporter, substrate binding protein [Lactobacillus casei BL23] gi|190713249|emb|CAQ67255.1| Glutamine ABC transporter, substrate binding protein [Lactobacillus casei BL23] gi|327382995|gb|AEA54471.1| Sugar binding protein [Lactobacillus casei LC2W] gi|327386183|gb|AEA57657.1| Sugar binding protein [Lactobacillus casei BD-II] Length = 274 Score = 171 bits (435), Expect = 1e-40, Method: Composition-based stats. Identities = 50/255 (19%), Positives = 93/255 (36%), Gaps = 14/255 (5%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + IL K + G+ F + G +GFDVD +A++ I K Q Sbjct: 29 ADRDILTTAKTTNTIFWGVKADTRLFGLMDIKTGKIEGFDVDMAKAITKQILGSKGKAQL 88 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + + + R ++ +D + T R+ L F + + GQ ++ K I SV Sbjct: 89 VQVTSDTRVPMIKGGNVDAVIATMTITPERQK--ILDFSDVYFNAGQSILVKKGSPIKSV 146 Query: 141 SQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L G + G+ + D K + + A ++ + DA T D Sbjct: 147 KDLKKGTKVIGVQGSNSV----DNVKKAAPDTTVLQLSDYAQAFTALKSGQGDALTTDNG 202 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 LY + + +++ +K P AI +G + V+ A+ ++ G K Sbjct: 203 ILYGMSEQDPN---YIVTGGTFTKEPYGIAINKGQKPFVQAVN---KAIKQLKQNGTYAK 256 Query: 260 NINQVSKDTTNPDVQ 274 I + D ++ Sbjct: 257 LIKKWFGDVPGFSLK 271 >gi|157369177|ref|YP_001477166.1| extracellular solute-binding protein [Serratia proteamaculans 568] gi|157320941|gb|ABV40038.1| extracellular solute-binding protein family 3 [Serratia proteamaculans 568] Length = 263 Score = 171 bits (435), Expect = 1e-40, Method: Composition-based stats. Identities = 50/262 (19%), Positives = 106/262 (40%), Gaps = 11/262 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 +K V L ++L + S A L +I++RG L+ + F V + +G+D+ Sbjct: 3 FKKIGVVALGAVLLMAQAASAMADQLQEIQQRGVLRVAVPQDFPPFGSVGTDLQPQGYDI 62 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D + L+ + K+Q +P+ + R LQ+ ++D++ + RE ++ + Sbjct: 63 DMAQYLADKM---KLKLQLVPVTSANRVPYLQTNKVDLVISSLGKNAEREKAIAFSRTYA 119 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 +F G K+ ++ +QL+G +I V G ++ L+D +E Sbjct: 120 PFF--LGVFGPKESVLADATQLNGKTIGVTRGAVEDMVLSDTAPK---GTQIKRYEDNNT 174 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +AY + + + A+ PS+ + ++ SP + G+ V Sbjct: 175 TLSAYLSGQVQYIATGNLVVSAIARQ--NPSKAPVAKFMLKDSPCYVGLRLGEPALQAKV 232 Query: 242 SWTHYAMVTAEEL-GITQKNIN 262 + L G+++K + Sbjct: 233 DQLIEQALKDNTLNGLSEKWLK 254 >gi|111020803|ref|YP_703775.1| glutamine ABC transporter substrate-binding protein [Rhodococcus jostii RHA1] gi|110820333|gb|ABG95617.1| probable ABC glutamine transporter, substrate binding component [Rhodococcus jostii RHA1] Length = 341 Score = 171 bits (435), Expect = 1e-40, Method: Composition-based stats. Identities = 46/247 (18%), Positives = 94/247 (38%), Gaps = 13/247 (5%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 L I RG L G++ F+ G +GFDVD + ++ IF DP+++++ L Sbjct: 96 SLAAIAARGRLIVGVDQNTNLFSFRDPTTGTLQGFDVDLAKEVARDIFGDPTRVEFRLLT 155 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 + RF AL++ ++D++ T T R +G + + Q ++ + I+ + L+ Sbjct: 156 SAGRFSALENNEVDVVVHATSITCERARRVGFSTE--YFRAFQRILVPQGSDITGPADLA 213 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G +C TT+ T+ + ++ + + DA + S L L Sbjct: 214 GKRVCTFVDTTSLATVQRVAPDA----TILAVPDWDDCLVTMQKKQADAVSTSDSLLAGL 269 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 + I+ + + +G + V+ T + G + ++ Sbjct: 270 ASQDRN---FRIVGPQLEAEHWGIGVNKGRDDLVRFVNGTLERIRA---DGTWMRLYDRW 323 Query: 265 SKDTTNP 271 P Sbjct: 324 LAAPLGP 330 >gi|322421000|ref|YP_004200223.1| family 3 extracellular solute-binding protein [Geobacter sp. M18] gi|320127387|gb|ADW14947.1| extracellular solute-binding protein family 3 [Geobacter sp. M18] Length = 264 Score = 171 bits (435), Expect = 1e-40, Method: Composition-based stats. Identities = 60/272 (22%), Positives = 92/272 (33%), Gaps = 13/272 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + V L++ S +K +G L G++ G GFD Sbjct: 1 MKKIWVVLSSLLVLACAVSAFAGDGSFKRVKSQGALTIGLDDAFPPMGYRNDKGQLVGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + KI + P AL SK+ D + T R +AF Sbjct: 61 IDAAEEAGKRLG---IKINWQPTAWDGVIHALNSKKFDCIWNGMTITEER--KKEVAFTK 115 Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 DGQ ++ +K ++ L GA + VQ G++ + A +E Sbjct: 116 PYKMDGQVAVVRFGEKKFKKLADLKGAKVGVQKGSSAVEAVKKLPAA---PAEVREYEDN 172 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + + R D D + RP + I+P I+K P A + D E Sbjct: 173 PKALLDLESKRLDTVIIDDAT--GRDFIAKRPGKFQIIPGNITKEPFGVAFRKEDVELRE 230 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 V T MV + K +D TNP Sbjct: 231 AVQKTLDKMVKDGTMAKISK--KWFGEDITNP 260 >gi|158425756|ref|YP_001527048.1| putative amino acid ABC transporter substrate binding protein [Azorhizobium caulinodans ORS 571] gi|158332645|dbj|BAF90130.1| putative amino acid ABC transporter substrate binding protein [Azorhizobium caulinodans ORS 571] Length = 304 Score = 171 bits (435), Expect = 1e-40, Method: Composition-based stats. Identities = 46/261 (17%), Positives = 96/261 (36%), Gaps = 11/261 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + ++ L L + T+ A L DI K G +K + F V + G+D+ Sbjct: 46 RRTLVLAGLGLAAVSLTALPARADALDDIMKAGVIKIAVPQDFPPFGSVGPDLKPVGYDI 105 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D ++ + K + +P+ + R LQ+K++D++ + RE + + Sbjct: 106 DMANLIAQKLG---VKAELVPVTSANRIPYLQTKKVDLVISSLGKNPDREKVMDFSVAYA 162 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 +F+G ++ +L+G ++ V G ++ L+ A FE Sbjct: 163 PFFNGA--FAPADVKVTKPEELAGLTVGVTRGANEDIELSKIAPA---TADIKRFEDNNA 217 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +A+ + + A+ P + +I SP + + + + V Sbjct: 218 TISAFLSGQVKVIVTGNVTAAAILAR--NPPRKPEVKFLIKDSPCYVGLNKDEPKLLEKV 275 Query: 242 SWTHYAMVTAEELG-ITQKNI 261 + A L I+QK + Sbjct: 276 NAIITAAKADGALNAISQKWL 296 >gi|89214058|gb|ABD64370.1| amino acid ABC transporter [Pseudomonas chlororaphis] Length = 295 Score = 171 bits (435), Expect = 1e-40, Method: Composition-based stats. Identities = 54/268 (20%), Positives = 100/268 (37%), Gaps = 18/268 (6%) Query: 1 MYKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K F + L L + +A+ L D+ RG LK + F V + +G Sbjct: 1 MTKRFSALLSALFASLMLSQTPAHANGLDDVVARGTLKVAVPQDFPPFGSVGPDMKPRGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D + L+ + K++ P+N+ R L + ++D++ + RE + + Sbjct: 61 DIDTAKLLADQL---KVKLELTPVNSTNRIPFLTTGKVDLVISSLGXNPEREKVIDFSQA 117 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 ++ + ++++ L G +I V G ++ L FE Sbjct: 118 YAPFY--LAVFGPPEAPVATLDDLKGKTISVTRGAIEDIELTAVAPQ---GVTIKRFEDN 172 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEW 237 AAY A + D + A+ N + P+ V L D SP+ + + E Sbjct: 173 NSTIAAYLAGQVDLIASGNVVMVAISERNPKRIPAMKVKLKD----SPVYVGVNKNQPEL 228 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVS 265 + V+ TA+ G +KN Sbjct: 229 LDKVNQILT---TAKADGSLEKNARLWL 253 >gi|227877827|ref|ZP_03995851.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus crispatus JV-V01] gi|256850704|ref|ZP_05556128.1| glutamine ABC transporter [Lactobacillus crispatus MV-1A-US] gi|262047073|ref|ZP_06020032.1| glutamine ABC transporter [Lactobacillus crispatus MV-3A-US] gi|293381623|ref|ZP_06627607.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus crispatus 214-1] gi|227862588|gb|EEJ70083.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus crispatus JV-V01] gi|256712475|gb|EEU27472.1| glutamine ABC transporter [Lactobacillus crispatus MV-1A-US] gi|260572650|gb|EEX29211.1| glutamine ABC transporter [Lactobacillus crispatus MV-3A-US] gi|290921807|gb|EFD98825.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus crispatus 214-1] Length = 272 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 46/281 (16%), Positives = 101/281 (35%), Gaps = 17/281 (6%) Query: 1 MYKDFFV--SILCLIILFFTSFSTN--ASILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55 M K F + SI+ L L + N ++ +K + G+ F + G Sbjct: 1 MRKKFLLIISIVVLFALPLSGCKQNKKQNVYQAVKTSKTINWGVKADTPLFGSINIKTGK 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GF++D AL+ + K ++ A + L++ +D + T R+ + Sbjct: 61 LNGFEIDLANALTHEMLGKNVKANFITTTANTKIQLLKNTNVDAVIAAMTITPERKKQVE 120 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + + GQ ++ I + L+ + V GTT + + Sbjct: 121 FSH--PYFPAGQSIMVADSSAIKNAKNLNNKKVLVVKGTTAADAIHQVAPKA----EILQ 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F+ + AA +A + DA+ D L + S + ++ + P A+ +G Sbjct: 175 FDDYGQAFAALKAGQGDAFVTDNGILAGI---LRDSSGYKLVGGTFTNQPYGIAVNKGQN 231 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRF 276 +++ + A+ E+ G + + + +++ Sbjct: 232 ---DMLKHINTALAKLEKNGTYNHLVKKWFGNIPGMNIKEL 269 >gi|219683680|ref|YP_002470063.1| glutamate-binding protein of ABC transporter system [Bifidobacterium animalis subsp. lactis AD011] gi|219621330|gb|ACL29487.1| glutamate-binding protein of ABC transporter system [Bifidobacterium animalis subsp. lactis AD011] Length = 271 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 50/254 (19%), Positives = 101/254 (39%), Gaps = 13/254 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + LF + S D +K+ ++ GI G K +G ++GFD Sbjct: 1 MARKAIAMVCAASALF--GMAACGSSSADGEKK--IRIGIKYDQPGLGF-KKSGTFEGFD 55 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD R +++ + ++I++L +K+R LQ+ +D++ T R+ ++ A Sbjct: 56 VDVARYVANQLGYTDAEIEFLEAPSKQREAMLQNGDVDMILATYSITDERKKAVSFA--G 113 Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ ++ I+ L+G +C G+T+ + + F + Sbjct: 114 PYFVAGQDLMVRADDHSINGPEDLNGKRLCSVTGSTSAKVVKERFAKE---VQLMEQPGY 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A + DA T D L L + + ++ ++ I +GDT + Sbjct: 171 AECATALFSGIVDAVTTDDIILAGLASASR--GKLRVVGKPFTQEYYGVGIRKGDTAFAK 228 Query: 240 IVSWTHYAMVTAEE 253 ++ M+ + E Sbjct: 229 QINAAIEDMIKSGE 242 >gi|238765045|ref|ZP_04625981.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia kristensenii ATCC 33638] gi|238696731|gb|EEP89512.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia kristensenii ATCC 33638] Length = 263 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 47/263 (17%), Positives = 106/263 (40%), Gaps = 12/263 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +IL ++ + + A L I++RG L+ + F V + +G+D Sbjct: 3 MKKRML-AILGAALILVQAPTVLADQLEQIQQRGVLRVAVPQDFPPFGSVGTDLQPQGYD 61 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D L+ + K+Q +P+++ R LQ+ ++D++ + RE ++ + Sbjct: 62 IDMAHYLADKM---KLKLQLVPVSSANRVPYLQTDKVDLVISSLGKNPEREKAIAFSRAY 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +F G K+ + +QL+G ++ V G ++ L++ +E Sbjct: 119 APFF--LGVFGAKEDALQQPAQLAGKTVGVTRGAVEDMVLSELAPK---DAQIKRYEDNS 173 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +AY + + + + AL P++ + ++ SP + QG+ Sbjct: 174 TTLSAYLSGQVNYLATGNLVVSALARQ--NPAQAPVAKFMLKDSPCYIGLRQGEPALKAK 231 Query: 241 VSWTHYAMVTAEELG-ITQKNIN 262 V + + L +++K + Sbjct: 232 VDALIAEALQDQTLNSLSEKWLK 254 >gi|309811005|ref|ZP_07704803.1| putative ABC transporter glutamine-binding protein GlnH [Dermacoccus sp. Ellin185] gi|308434969|gb|EFP58803.1| putative ABC transporter glutamine-binding protein GlnH [Dermacoccus sp. Ellin185] Length = 273 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 49/253 (19%), Positives = 95/253 (37%), Gaps = 8/253 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + + + L T+ + +K GI G +KA D+KG D Sbjct: 1 MKRAIATAGVAALALGLTACGGSDDKSSS-GSGDKIKIGIKYDQPGLG-LKAGSDYKGLD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + ++ + KI ++ +K+R L++ + ++ T R+ + Sbjct: 59 VDVAKYVAKEMGYGEDKIDFVESPSKQREKMLEAGTVKMIFATYSITDKRKQQVSF--GG 116 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + GQ + I SV L+G +C G+T+ L K P +++ Sbjct: 117 PYFVAGQSVLTKADSDIKSVKDLAGKKVCSVTGSTSVDNL----KKQQPNLVPQQYDKYS 172 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E A + DA T D + L + + ++ D ++ + +GD + Sbjct: 173 ECADALASGAIDAMTTDNTILAGYANQDAYKGKFKLVGDAFTEEKYGVGLKKGDKDTCEK 232 Query: 241 VSWTHYAMVTAEE 253 V+ MV + E Sbjct: 233 VNKAITKMVDSGE 245 >gi|270290757|ref|ZP_06196981.1| glutamine transport system substrate-binding protein [Pediococcus acidilactici 7_4] gi|270280817|gb|EFA26651.1| glutamine transport system substrate-binding protein [Pediococcus acidilactici 7_4] Length = 277 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 44/285 (15%), Positives = 100/285 (35%), Gaps = 23/285 (8%) Query: 1 MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVK- 51 M + F + L L + F + ++ L G+ F + Sbjct: 1 MRRRFKMLFLGLTAVLFLGILGGCTKQEAKQRDAWQTAQQTKTLTWGVKADTKLFGLMDV 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 + KGFD+D +AL+ + ++ +++ + ++ R L++ +D + T R+ Sbjct: 61 KDSQIKGFDIDIAKALTKQMLGKDAQAEFVQVTSQTRIPLLKNGNLDAVIATMTITKDRQ 120 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNM 169 + + + GQ ++ K I SV L+ G + G + + + Sbjct: 121 KVVDFSDS--YFDAGQSLLVPKDSKIHSVRDLNHPGTKVIGVVGANSVSNVKKFAPKAQ- 177 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 I + + A ++ + A T D L+ + + N + ++ +K P A Sbjct: 178 ---VIQLQDYAQALTALKSGQGAALTTDNGILFGMAVDNP---QFKVVGKAFTKEPYGIA 231 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 I Q ++ ++ E + I + D + + Sbjct: 232 INQNQPALKKHLNQALEEIIANGE---YNRLIKKWFGDIPGFNYR 273 >gi|293393701|ref|ZP_06638010.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Serratia odorifera DSM 4582] gi|291423823|gb|EFE97043.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Serratia odorifera DSM 4582] Length = 279 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 55/249 (22%), Positives = 95/249 (38%), Gaps = 14/249 (5%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 L DIK+ G ++ + F + G+DVD A+ A+ K++ Sbjct: 25 DKLDDIKQAGVVRIAVFDSNPPFGYIDPQSKKLVGYDVDIADAIGKALG---VKVELRAT 81 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 N R L +K++D+++ N T R + + F + GQ FI K + + + Sbjct: 82 NPANRIPLLAAKKVDLIAANFTITEQR--AKEVNFSVPYFATGQKFIARKG-VLKTPEDI 138 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 I GT E+TL +++ I ++ A R A T D + L Sbjct: 139 KTLRIGADKGTVQEITLREHYPTA----KVISYDDTPLAFVALRNGNVQAITQDDAKLVG 194 Query: 204 LK--LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE-LGITQKN 260 L LT + ++ I P I+K I +G+ ++ T + E L I Q+ Sbjct: 195 LLGNLTPAQKADFEISPFSITKEYQGIGIPKGEERLTATINDTLLKLEQDGEALTIYQRW 254 Query: 261 INQVSKDTT 269 +K Sbjct: 255 FGPDTKTAQ 263 >gi|315652801|ref|ZP_07905775.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Eubacterium saburreum DSM 3986] gi|315485003|gb|EFU75411.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Eubacterium saburreum DSM 3986] Length = 289 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 54/259 (20%), Positives = 101/259 (38%), Gaps = 15/259 (5%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L +IKK G + G+ + F V NG+++G+D+ F L + KI Y+ A Sbjct: 43 TLDEIKKSGTINIGVFSDKHPFGYVDENGEYQGYDIYFGNKLGEDLG---VKINYVSTEA 99 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 R L++ ++D++ N T R ++ A G G I + + S+ + Sbjct: 100 ANRVEYLETGKVDLILANFTVTPERAEAVDFAL--PYMNVGLGVISSESNKVDSLDNWNA 157 Query: 146 A-SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 + + V +GTT E + + ++ A A+ D + + A Sbjct: 158 SDEMIVISGTTAEP----FMIKNYPNIKLQKYDTYANAKNALLNGSGKAWVNDNTEVLAF 213 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 + P V + D+ K +APA+ +G+T + W + + T + K+ Sbjct: 214 AKS--NPGYVVGIDDLGVKDTIAPAVTKGNTTLLD---WVNSEIETLGKENFFHKDYEAT 268 Query: 265 SKDTTNPDVQRFLGIDKSS 283 DT + L I+ Sbjct: 269 LTDTYGAEYADTLVIEGGK 287 >gi|89899769|ref|YP_522240.1| extracellular solute-binding protein [Rhodoferax ferrireducens T118] gi|89344506|gb|ABD68709.1| extracellular solute-binding protein, family 3 [Rhodoferax ferrireducens T118] Length = 280 Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats. Identities = 49/259 (18%), Positives = 96/259 (37%), Gaps = 5/259 (1%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 + + S L + RG L G + + A+ +GFD+D + +S A+FD+P Sbjct: 19 GASVNAAGTSKLDQVLARGKLIVGTGSTNAPWHFKSADNKLQGFDIDIAKIISKALFDNP 78 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 KI+++ ++ R + + ++DI + T R + +AF + +G G + Sbjct: 79 DKIEFVNQSSDARIPNITTDKVDITCQFLTVTGGR--AQQVAFTIPYFREGVGLMTKTGS 136 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 + L A V + A ++ + + A + R DA Sbjct: 137 KRGDYAALKAAGASVNVAVLQNVYAESMVHAALPMAKVAQYDSPDLMYQALNSGRADAAA 196 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D S++ P ++ + A A+ +GD +W N V+ + +T E Sbjct: 197 TDQSSISWFIKQ--NPGKYKDAGYGWNPQTYACAVKRGDQDWLNFVNTALHEAMTGVEFD 254 Query: 256 ITQKNINQVSK-DTTNPDV 273 + D P + Sbjct: 255 AYAASYKTWFGVDLAPPKI 273 >gi|291448799|ref|ZP_06588189.1| glutamate binding periplasmic protein [Streptomyces roseosporus NRRL 15998] gi|291351746|gb|EFE78650.1| glutamate binding periplasmic protein [Streptomyces roseosporus NRRL 15998] Length = 308 Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats. Identities = 52/251 (20%), Positives = 99/251 (39%), Gaps = 13/251 (5%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 ++ K+RG L G E A+G + GFD++ R +++++ +P I++ Sbjct: 56 DSRTWTKAKRRGHLVVGAKEDQPYLGEKDPASGIYSGFDIEIARMMAASLGFEPKTIRFR 115 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSV 140 + + R ALQ+ QID +R+ +G A Y GQG ++ I+ Sbjct: 116 TIASANRETALQNGQIDYYVGTYTINDMRKKLVGFA--GPYYMAGQGLLVRTDEDDINGP 173 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L+G ++C AG+T +A + + ++ ++ DA T D + Sbjct: 174 QDLAGKTVCSAAGSTPYQRIAADYPKA----TLVAYDTYSICVDNLLTYQVDAVTTDDAI 229 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L P E ++ S+ P + + D N ++ A E+ G +K Sbjct: 230 LLGFAAKA--PEEMKVVGKPFSEEPYGIGVPRSDNALRNALNDALEAN---EKNGNWKKA 284 Query: 261 INQVSKDTTNP 271 + + P Sbjct: 285 YDATLGLSGAP 295 >gi|227820383|ref|YP_002824354.1| glutamine ABC transporter periplasmic protein [Sinorhizobium fredii NGR234] gi|227339382|gb|ACP23601.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Sinorhizobium fredii NGR234] Length = 261 Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats. Identities = 47/262 (17%), Positives = 94/262 (35%), Gaps = 11/262 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + FV++ + A LGDI RG ++ + F V + G+D Sbjct: 2 LSRRLFVAMTAMAAAIGFGSIAQADALGDITARGTIRVAVPQDFPPFGSVGPDMAPVGYD 61 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D ++ + K++ +P+ + R LQ+ ++D++ + RE + Sbjct: 62 IDMANLIAEKLG---VKVELVPVTSANRIPYLQTNKVDLVISSLGKNPDREKVIDFTAAY 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +++G + +L+G +I V G +L L A +E Sbjct: 119 APFYNG--VFAPADFVAAKPEELAGKTIGVTRGAVEDLELTKIAPA---DTVIKRYEDNN 173 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +A+ + + +A A+ P + L +I SP + + Sbjct: 174 GTISAFLSGQVEAVATGNVVAAAILA--KNPPKRPELKFLIKNSPCYIGLSKEQPALLEK 231 Query: 241 VSWTHYAMVTAEELG-ITQKNI 261 V+ A T L I QK + Sbjct: 232 VNGIIAAAKTDGSLNAIAQKWL 253 >gi|239945337|ref|ZP_04697274.1| putative glutamate ABC transporter substrate-binding protein [Streptomyces roseosporus NRRL 15998] gi|239991794|ref|ZP_04712458.1| putative glutamate ABC transporter substrate-binding protein [Streptomyces roseosporus NRRL 11379] Length = 294 Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats. Identities = 52/251 (20%), Positives = 99/251 (39%), Gaps = 13/251 (5%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 ++ K+RG L G E A+G + GFD++ R +++++ +P I++ Sbjct: 42 DSRTWTKAKRRGHLVVGAKEDQPYLGEKDPASGIYSGFDIEIARMMAASLGFEPKTIRFR 101 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSV 140 + + R ALQ+ QID +R+ +G A Y GQG ++ I+ Sbjct: 102 TIASANRETALQNGQIDYYVGTYTINDMRKKLVGFA--GPYYMAGQGLLVRTDEDDINGP 159 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L+G ++C AG+T +A + + ++ ++ DA T D + Sbjct: 160 QDLAGKTVCSAAGSTPYQRIAADYPKA----TLVAYDTYSICVDNLLTYQVDAVTTDDAI 215 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L P E ++ S+ P + + D N ++ A E+ G +K Sbjct: 216 LLGFAAKA--PEEMKVVGKPFSEEPYGIGVPRSDNALRNALNDALEAN---EKNGNWKKA 270 Query: 261 INQVSKDTTNP 271 + + P Sbjct: 271 YDATLGLSGAP 281 >gi|256844635|ref|ZP_05550120.1| glutamine ABC transporter [Lactobacillus crispatus 125-2-CHN] gi|256613176|gb|EEU18380.1| glutamine ABC transporter [Lactobacillus crispatus 125-2-CHN] Length = 272 Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats. Identities = 46/281 (16%), Positives = 102/281 (36%), Gaps = 17/281 (6%) Query: 1 MYKDFFV--SILCLIILFFTSFSTN--ASILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55 M K F + SI+ L L + N ++ +K + G+ F + G Sbjct: 1 MRKKFLLIISIVVLFALPLSGCKQNKKQNVYQAVKTSKTINWGVKADTPLFGSINIKTGK 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GF++D AL+ + +K ++ A + L++ +D + T R+ + Sbjct: 61 LNGFEIDLANALTHEMLGKNAKANFITTTANTKIQLLKNTNVDAVIAAMTITPERKKQVE 120 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + + GQ ++ I + L+ + V GTT + + Sbjct: 121 FSH--PYFPAGQSIMVADSSAIKNAKNLNNKKVLVVKGTTAADAIHQVAPKA----EILQ 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F+ + AA +A + DA+ D L + S + ++ + P A+ +G Sbjct: 175 FDDYGQAFAALKAGQGDAFVTDNGILAGI---LRDSSGYKLVGGTFTNQPYGIAVNKGQN 231 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRF 276 +++ + A+ E+ G + + + +++ Sbjct: 232 ---DMLKHINTALAKLEKNGTYNHLVKKWFGNIPGMNIKEL 269 >gi|167038160|ref|YP_001665738.1| extracellular solute-binding protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320116569|ref|YP_004186728.1| family 3 extracellular solute-binding protein [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|326389621|ref|ZP_08211187.1| extracellular solute-binding protein family 3 [Thermoanaerobacter ethanolicus JW 200] gi|166856994|gb|ABY95402.1| extracellular solute-binding protein, family 3 [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319929660|gb|ADV80345.1| extracellular solute-binding protein family 3 [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|325994336|gb|EGD52762.1| extracellular solute-binding protein family 3 [Thermoanaerobacter ethanolicus JW 200] Length = 261 Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats. Identities = 60/276 (21%), Positives = 104/276 (37%), Gaps = 26/276 (9%) Query: 1 MYKD----FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD- 55 M K F + L ++ + A+ L IK++G + G + + K G+ Sbjct: 1 MNKKTLFVFLTMTIILGLILSACGNKPANTLDKIKEKGVIVMGTSADFPPYEFHKVEGNK 60 Query: 56 --WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 GFDVD A++ + K++ ++ K ALQ+ +ID+ T R S Sbjct: 61 DTIVGFDVDIANAIAKKLG---VKLEIKDMDFKGLIPALQAGRIDMAIAGMTPTPERAKS 117 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + + Y Q ++ IS L G ++ VQ GTT+E Sbjct: 118 VDF--SDLYYDSKQVVVVRNDSPISKFDDLKGKTVAVQIGTTSEEA-----AKKIPDVKL 170 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL--PDIISKSP-LAPAI 230 RV + + RCDA + + A + IL +I + A A+ Sbjct: 171 KQLNRVGDAFMDLKNGRCDAIVLENTVANAY---LKEYKDMKILNMKEINTVENGSAVAV 227 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 +G+ E NI++ + + E K I++ K Sbjct: 228 AKGNKELVNIINDVIKELKASGE---YDKLIDKWFK 260 >gi|29828504|ref|NP_823138.1| glutamate binding periplasmic protein [Streptomyces avermitilis MA-4680] gi|29605607|dbj|BAC69673.1| putative glutamate ABC transporter substrate-binding protein [Streptomyces avermitilis MA-4680] Length = 305 Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats. Identities = 56/261 (21%), Positives = 102/261 (39%), Gaps = 18/261 (6%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 ++ KKRG+L G+ E A+G + GFD++ + +S+++ DP I++ Sbjct: 53 DSPTWKRAKKRGYLTVGVKEDQPYLGERDPASGAFSGFDIEIAKMMSASLGFDPGTIRFK 112 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSV 140 + + R ALQ+ QID R+ +G A Y GQ ++ K + GI+ Sbjct: 113 TIASANRETALQNGQIDYYVGTYTINDKRKKLVGFA--GPYYLAGQSLLVRKDEQGINGP 170 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L+G +C AG+T + + K + ++ ++ DA T D + Sbjct: 171 QDLAGKRVCSAAGSTPYQRIQQDYP----KVKLVAYDTYSVCVDNLLTYQVDAVTTDDAI 226 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L P E ++ S+ P + + D + A E+ G +K Sbjct: 227 LIGYAA--KVPEELKVVGKPFSEEPYGIGVPRNDNALRFALDDALEAR---EKDGDWKKA 281 Query: 261 INQVSKDT-----TNPDVQRF 276 + T P + R+ Sbjct: 282 YEATLGLSGVPAPTPPAIDRY 302 >gi|319795334|ref|YP_004156974.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] gi|315597797|gb|ADU38863.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] Length = 275 Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 56/253 (22%), Positives = 95/253 (37%), Gaps = 14/253 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSK 77 +A L DIKK+G L G+ V G++VD A++ I P Sbjct: 18 GTVAHADQLADIKKKGELVVGVLGTDEPATFVDPKTRQIVGYEVDLVNAIAKKIGVKPV- 76 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 + R LQ +D+++ RE + + T+ GQ I+ K GI Sbjct: 77 --LKQIAVAARIPELQQGHVDLVAAGLTHNKEREAQIDFSL--TTFVTGQKAIVKKDSGI 132 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + + QL G + G T E + + F+ ++ A + + Y D Sbjct: 133 ADIPQLGGKKVLTIRGGTQEPNIRKAVPTA----EVVTFDTSQQAFQALQQGKGVGYVDD 188 Query: 198 ISALY-ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 +AL + +++V+L +S LA I +G++ +V T E+ G Sbjct: 189 EAALLRSYAKLGPAKAQYVVLKQNLSTEALAIGIKKGESGLKAVVDDTLR---ELEKSGE 245 Query: 257 TQKNINQVSKDTT 269 QK + TT Sbjct: 246 AQKIFVKWYGPTT 258 >gi|254555899|ref|YP_003062316.1| glutamine ABC transporter, substrate binding protein [Lactobacillus plantarum JDM1] gi|300767693|ref|ZP_07077603.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308179876|ref|YP_003924004.1| glutamine ABC transporter, substrate binding protein [Lactobacillus plantarum subsp. plantarum ST-III] gi|254044826|gb|ACT61619.1| glutamine ABC transporter, substrate binding protein [Lactobacillus plantarum JDM1] gi|300494678|gb|EFK29836.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308045367|gb|ADN97910.1| glutamine ABC transporter, substrate binding protein [Lactobacillus plantarum subsp. plantarum ST-III] Length = 278 Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 44/286 (15%), Positives = 95/286 (33%), Gaps = 24/286 (8%) Query: 1 MYK-DFFVSILCLIILFFTSFSTNA--------SILGDIKKRGFLKCGINTGLVGFAEVK 51 M K + L ++ + + +L + K + G+ F + Sbjct: 1 MKKLKRLIGALGMLAMLVVVLTACGSRQSLAKQDVLTNDKASKTITWGVKADTKLFGLMD 60 Query: 52 -ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 + KGFD D AL+ + + +++ + ++ R L++ ID + T R Sbjct: 61 VKDNQIKGFDADIATALTKRVLGKNATAKFVQVTSQTRIPLLKNGNIDAIIATMTITPER 120 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHN 168 E + + GQ ++ K I SV L+ G + G + + Sbjct: 121 EKQVDFTNS--YFDAGQSLLVKKGSAIKSVKDLNKSGTKVLGVTGANSVENIKKAAPKA- 177 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 + + A ++ + A T D LY + N + ++ +K P Sbjct: 178 ---KVLELSDYAQAMTALKSGQGVALTTDNGILYGMASQNPG---YEVVGGTFTKEPYGI 231 Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 A+ +G ++ + E G + + + + D + Sbjct: 232 AVNKGQEPLKKALNKALKEI---EADGTYNRILKKWFGNVAGFDYK 274 >gi|270263422|ref|ZP_06191691.1| hypothetical protein SOD_e00460 [Serratia odorifera 4Rx13] gi|270042306|gb|EFA15401.1| hypothetical protein SOD_e00460 [Serratia odorifera 4Rx13] Length = 263 Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 48/262 (18%), Positives = 104/262 (39%), Gaps = 11/262 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 +K V+ L ++L + S A L +I++RG L+ + F V + +G+D+ Sbjct: 3 FKKIGVATLGAVLLMAQAASAMADQLQEIQQRGVLRVAVPQDFPPFGSVGTDLQPQGYDI 62 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D L+ + K+Q +P+ + R LQ+ ++D++ + RE ++ + Sbjct: 63 DMAHYLADKM---KLKLQLVPVTSANRVPYLQTDKVDLVISSLGKNPEREKTIAFSRAYA 119 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 +F G K+ + +QL G ++ V G ++ L+D +E Sbjct: 120 PFF--LGVFGPKEAVLGDAAQLDGKTVGVTRGAVEDMVLSDTAPK---GAQIKRYEDNNT 174 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +AY + + + A+ P++ + ++ SP + G+ V Sbjct: 175 TLSAYLSGQVQYIATGNLVVSAIARQ--NPTKAPVAKFMLKDSPCFVGLRLGEPALKAKV 232 Query: 242 SWTHYAMVTAEEL-GITQKNIN 262 + L G+++K + Sbjct: 233 DELIEQALKDNTLNGLSEKWLK 254 >gi|170692054|ref|ZP_02883218.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] gi|170143338|gb|EDT11502.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] Length = 258 Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 48/259 (18%), Positives = 92/259 (35%), Gaps = 12/259 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + ++L +L T +A L +I K G LK + F V + +G+D Sbjct: 1 MRRTLLAALLASPVLAVT-VPAHADTLDNIAKAGVLKVAVPEDYPPFGSVGPDMKPQGYD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ L+ ++ K++ +P+N+ R LQ+ ++D++ + T RE + + Sbjct: 60 IETAALLAKSM---NVKLELVPVNSANRIPYLQTNKVDLVISSLGKTPDREKVIDFSTAY 116 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+ QG +S + L+G ++ G EL L +K FE Sbjct: 117 APYY--QGVFGPADVKVSGPADLTGKTVGATRGALEELGLTQMAPNATIK----RFEDNN 170 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 AA+ + + A+ P +I SP + + + Sbjct: 171 ATIAAFLSGQVQLIAAGNIVAAAILA--KNPPRRPEPKFVIKNSPCFVGMNKNEPRLQQK 228 Query: 241 VSWTHYAMVTAEELGITQK 259 V+ K Sbjct: 229 VNAAIAQAKQDGTFNTMSK 247 >gi|289643954|ref|ZP_06476056.1| extracellular solute-binding protein family 3 [Frankia symbiont of Datisca glomerata] gi|289506230|gb|EFD27227.1| extracellular solute-binding protein family 3 [Frankia symbiont of Datisca glomerata] Length = 254 Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 46/250 (18%), Positives = 92/250 (36%), Gaps = 11/250 (4%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L I RG+L G+ F V + G+++GFDVD + +F P +++ + A Sbjct: 13 LRRIFDRGYLIVGVRPDTPPFGSVNPDTGEFEGFDVDIANLVGRWLFGAPRHVRFRAITA 72 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 +R + +ID+ + + T + L + F + Y G ++ + S++ L G Sbjct: 73 AQRLPLVAQGEIDLSTGSLTATC--DRLLEVDFATVYYMTATGLLVSRDSNYHSLADLGG 130 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 +C +GTT+ + + P V + A + + D L L Sbjct: 131 RKVCAASGTTSLQAIEN----EPSHPIPYPVSNVADCLIALQDGEVEGIVNDEMVLAGLA 186 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQKNINQV 264 P HV+ D P+ + + + + V+ I + +++ Sbjct: 187 AQ--DPRTHVVNADRF-DQPITAGVSKDNPDLTAFVNGVLERAFADGTWAQIFDRWLDRT 243 Query: 265 SKDTTNPDVQ 274 P + Sbjct: 244 VPAPPTPVYR 253 >gi|297156308|gb|ADI06020.1| putative glutamate ABC transporter substrate-binding protein [Streptomyces bingchenggensis BCW-1] Length = 310 Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 51/251 (20%), Positives = 96/251 (38%), Gaps = 13/251 (5%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 ++ K+RG+L G E A G + GFD++ + +++++ DP +++ Sbjct: 56 SSPTWRKAKRRGYLVVGAKEDQPYLGEKDPATGRYSGFDIEIAKMMAASLGFDPKTVRFK 115 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSV 140 + + R ALQ+ QID LR+ +G A + GQ ++ + I Sbjct: 116 TIASANRETALQNGQIDYYVGTYTINPLRKRLVGFA--GPYFIAGQSLLVRTDEHDIHGP 173 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L+G ++C AG+T + + + H + ++ + + DA T D + Sbjct: 174 KDLAGKTVCSVAGSTPLMRIQSDYPKA----HAVAYDTYSVCVDNLISLQVDAVTTDNTI 229 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L P E ++ SK P + + D ++ A E G K Sbjct: 230 LLGYAAKA--PKELKVVGKPFSKEPYGIGVPKKDNALRFALNDAIEAN---ERNGNWLKA 284 Query: 261 INQVSKDTTNP 271 N + P Sbjct: 285 YNATLGLSGVP 295 >gi|325062524|gb|ADY66214.1| amino acid ABC transporter, substrate binding protein [Agrobacterium sp. H13-3] Length = 261 Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 49/263 (18%), Positives = 96/263 (36%), Gaps = 11/263 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 ++ ++ + F S A L DI RG L+ + F V A+ +G+D+ Sbjct: 3 FRRTLIAAAAMAAAFGLSAPAKADALADITARGTLRVAVPQDFPPFGSVAADMTPQGYDI 62 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D + ++ + K++ +P+ + R LQ+ ++D++ + RE + + Sbjct: 63 DVAKMIADKLG---VKVELVPVTSANRVPYLQTNKVDLVISSLGKNPDREKVIDFSDAYA 119 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 +F+G IS L G +I V G +L L + +E Sbjct: 120 PFFNG--VFGPADVAISKAEDLKGKTIAVTRGAVEDLELTKVAPS---DATIKRYEDNNG 174 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +A+ + + + A+ P + L +I SP + + + V Sbjct: 175 TISAFLSGQVEVVATGNVVAAAILA--KNPPKRPELKFLIKNSPCYIGLNKNEPALLEKV 232 Query: 242 SWTHYAMVTAEELG-ITQKNINQ 263 + T A L I K + Q Sbjct: 233 NATVAAAKADGSLNAIATKWLGQ 255 >gi|241196118|ref|YP_002969673.1| amino acid ABC transporter periplasmic protein [Bifidobacterium animalis subsp. lactis DSM 10140] gi|240250672|gb|ACS47611.1| ABC-type amino acid transport system periplasmic component [Bifidobacterium animalis subsp. lactis DSM 10140] Length = 279 Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 49/248 (19%), Positives = 102/248 (41%), Gaps = 12/248 (4%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 ++++C F + +S KK ++ GI G K +G ++GFDVD R Sbjct: 14 IAMVCAASALFGMAACGSSSADGEKK---IRIGIKYDQPGLGF-KKSGTFEGFDVDVARY 69 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 +++ + ++I++L +K+R LQ+ +D++ + T R+ ++ A + G Sbjct: 70 VANQLGYTDAEIEFLEAPSKQREAMLQNGDVDMILATSSITDERKKAVSFA--GPYFVAG 127 Query: 127 QGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 Q ++ I+ L+G +C G+T+ + + F + E A Sbjct: 128 QDLMVRADDHSINGPEDLNGKRLCSVTGSTSAKVVKERFAKE---VQLMEQPGYAECATA 184 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + DA T D L L + + ++ ++ I +GDT + ++ Sbjct: 185 LFSGIVDAVTTDDIILAGLASASR--GKLRVVGKPFTQEYYGVGIRKGDTAFAKQINAAI 242 Query: 246 YAMVTAEE 253 M+ + E Sbjct: 243 EDMIKSGE 250 >gi|325964012|ref|YP_004241918.1| amino acid ABC transporter substrate-binding protein, PAAT family [Arthrobacter phenanthrenivorans Sphe3] gi|323470099|gb|ADX73784.1| amino acid ABC transporter substrate-binding protein, PAAT family [Arthrobacter phenanthrenivorans Sphe3] Length = 296 Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 47/262 (17%), Positives = 96/262 (36%), Gaps = 19/262 (7%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 + + + G +K G F +V +G GFDV+ + +++ + KI++ Sbjct: 47 AAGTTMEKLSSAGSIKIGTKFDQPLFGQVGLDGKPVGFDVEIGKLIAAELGIPADKIEWS 106 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSV 140 + R ++ ++D++ R+ + A Y GQ +++K I Sbjct: 107 ETVSANREPFIEQGKVDLVIATYTINDKRKQVVDFA--GPYYEAGQALMVNKDNDTIKKP 164 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + G +C G+T T+ D + A + R + +A T D Sbjct: 165 EDVKGKKVCSVTGSTPAATIVDKYGA-----ELVPAATYSACLEPLRNKQVEAVTTDNVI 219 Query: 201 LYALKLTNDRPSEHVIL-PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L + P + + +K P + +GDTE+ +W + + EE G +K Sbjct: 220 LAGF--VDKEPDAFKLASDETFTKEPYGIGLKKGDTEFR---NWINDQLEKFEENGSYEK 274 Query: 260 NINQVSKDTTN-----PDVQRF 276 + P++ R+ Sbjct: 275 AWEATAGSVIKTAPKLPEIDRY 296 >gi|293392696|ref|ZP_06637015.1| arginine ABC superfamily ATP binding cassette transporter, binding protein [Serratia odorifera DSM 4582] gi|291424813|gb|EFE98023.1| arginine ABC superfamily ATP binding cassette transporter, binding protein [Serratia odorifera DSM 4582] Length = 263 Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 48/261 (18%), Positives = 105/261 (40%), Gaps = 11/261 (4%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K +V+ L I+L + + A L DI++RG L+ + F V + +G+D+D Sbjct: 4 KRIWVTALGAIVLMAQAGAVQADQLQDIQQRGVLRVAVPQDFPPFGSVGTDLQPQGYDID 63 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + L+ + K+Q +P+ + R LQ+ ++D++ + RE ++ + Sbjct: 64 MAQYLADKM---KLKLQLVPVTSANRVPYLQTNKVDLVISSLGKNPQREKAIAFSRAYAP 120 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 +F G + + + + L G +I V G ++ L+D +E Sbjct: 121 FF--LGVFGPQAEALKDPAALDGKTIGVTRGAVEDMVLSDSAPK---GAQIKRYEDNNTT 175 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 +AY + + + A+ P++ + ++ SP + G+ V Sbjct: 176 LSAYLSGQVQFVATGNLVVSAIARQ--NPAKAPVAKFMLKDSPCYVGLRLGEPALKAKVD 233 Query: 243 WTHYAMVTAEEL-GITQKNIN 262 + + L G+++K + Sbjct: 234 ALIEQALQDQTLNGLSEKWLK 254 >gi|116248754|ref|YP_764595.1| putative substrate-binding component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115253404|emb|CAK11792.1| putative substrate-binding component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 261 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 55/285 (19%), Positives = 101/285 (35%), Gaps = 25/285 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + F +I L F ++ A L DI RG L+ + F V + G+D Sbjct: 2 LTRRVFFAIATLAATFGFGSASYADALADITARGTLRVAVPQDFPPFGSVGTDMAPMGYD 61 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D ++ + K + +P+ + R LQ+ ++D++ + RE + Sbjct: 62 IDVANLIAEKLG---VKTELVPVTSANRVPYLQTNKVDLVISSLGKNAEREKVIDFTTAY 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +F+G I+ V L+G SI V G +L L A +E Sbjct: 119 APFFNG--VFAPADVSIAKVEDLAGKSIGVTRGAVEDLELTKIAPA---DATIKRYEDNN 173 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +A+ + + D A+ + P + + +I SP + + T Sbjct: 174 GTISAFLSGQVDTIATGNVVAAAI--LSKNPPKRPEMKFLIKNSPCYIGLNKEQTALLEK 231 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNI 285 V+ A T L Q++LG D S++ Sbjct: 232 VNGIIAAAKTDGALNAIS---------------QKWLGADLPSDL 261 >gi|163735254|ref|ZP_02142689.1| amino-acid ABC transporter, periplasmic binding protein [Roseobacter litoralis Och 149] gi|161391468|gb|EDQ15802.1| amino-acid ABC transporter, periplasmic binding protein [Roseobacter litoralis Och 149] Length = 278 Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats. Identities = 63/292 (21%), Positives = 119/292 (40%), Gaps = 19/292 (6%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + F +++ I++ + A L IK+ G L G T + + N + KG+ Sbjct: 1 MRPLFAALIAAILM---PAAAQAQTLERIKENGQLVIGFRTDAAPLSYLGEN-EPKGYTP 56 Query: 62 DFCR----ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 C +++A+ +I + P+ A+ RF + + ID+L TL R + Sbjct: 57 TVCYVLASKIAAAVELPDMEIIFRPVTAENRFEEVANGNIDLLCGAATITLERRELVDF- 115 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y DG ++ K G S+ +L+G + V++ TTT L + A ++ +VF+ Sbjct: 116 -SVPVYVDGTVVVLKKD-GPESLDELAGMKVGVRSATTTLDALQNSLNAADIAAEVVVFD 173 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 AA AY D S L + ++ + + +++ A+ +GDTE+ Sbjct: 174 DHPTGMAALEQDEITAYFADQSILMNMVAQSEVADDLKVFDQLLTVEKQGLAMARGDTEF 233 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEAL 289 IV + T G ++ + P+V+ LG+ + L Sbjct: 234 RLIVDRGLSELFT---EGAMEQAFARAL-----PNVKPGLGLQSMFLLSPTL 277 >gi|257461486|ref|ZP_05626582.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] gi|257441209|gb|EEV16356.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] Length = 268 Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats. Identities = 56/264 (21%), Positives = 108/264 (40%), Gaps = 21/264 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K IL +++LF +S N L +I++ G ++ G+ F++ +G ++GF+ Sbjct: 1 MKKI----ILGILLLFTSSVVAN--TLSEIRQSGSVRVGVFEAQPPFSKF-EDGKFQGFE 53 Query: 61 VDFCRALSSAIFD-DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 V ALS IF K++++P+ A ER L+ ++D++ T R+ + Sbjct: 54 VTLAEALSKDIFGGKAGKVEFVPVKASERLKVLEENKVDMVLATFTITNERKQLVDF--T 111 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G + I +VS L G I + GTT E YF+ + I Sbjct: 112 TPYFAVNIGVLTRAGDRIKTVSDLHGKPIIAETGTTGEA----YFRKEG--FEIINCATA 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E + + Y D + A + V + ++ L A+ +G+ + Sbjct: 166 NECYKMLKDGKGIGYATDNLIVLAYAVI--DSDTEVNIKNLGVSDFLGIAVSKGNKDLLE 223 Query: 240 IVSWTHYAMVTAEELGITQKNINQ 263 ++ +V + G +K ++ Sbjct: 224 FLNG---ELVKLSKNGFMKKTYDE 244 >gi|183601790|ref|ZP_02963160.1| glutamate-binding protein of ABC transporter system [Bifidobacterium animalis subsp. lactis HN019] gi|241190712|ref|YP_002968106.1| amino acid ABC transporter periplasmic component [Bifidobacterium animalis subsp. lactis Bl-04] gi|183219396|gb|EDT90037.1| glutamate-binding protein of ABC transporter system [Bifidobacterium animalis subsp. lactis HN019] gi|240249104|gb|ACS46044.1| ABC-type amino acid transport system periplasmic component [Bifidobacterium animalis subsp. lactis Bl-04] gi|289178450|gb|ADC85696.1| Glutamate-binding protein [Bifidobacterium animalis subsp. lactis BB-12] gi|295793701|gb|ADG33236.1| ABC-type amino acid transport system periplasmic component [Bifidobacterium animalis subsp. lactis V9] Length = 279 Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats. Identities = 49/248 (19%), Positives = 101/248 (40%), Gaps = 12/248 (4%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 ++++C F + +S KK ++ GI G K +G ++GFDVD R Sbjct: 14 IAMVCAASALFGMAACGSSSADGEKK---IRIGIKYDQPGLGF-KKSGTFEGFDVDVARY 69 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 +++ + ++I++L +K+R LQ+ +D++ T R+ ++ A + G Sbjct: 70 VANQLGYTDAEIEFLEAPSKQREAMLQNGDVDMILATYSITDERKKAVSFA--GPYFVAG 127 Query: 127 QGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 Q ++ I+ L+G +C G+T+ + + F + E A Sbjct: 128 QDLMVRADDHSINGPEDLNGKRLCSVTGSTSAKVVKERFAKE---VQLMEQPGYAECATA 184 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + DA T D L L + + ++ ++ I +GDT + ++ Sbjct: 185 LFSGIVDAVTTDDIILAGLASASR--GKLRVVGKPFTQEYYGVGIRKGDTAFAKQINAAI 242 Query: 246 YAMVTAEE 253 M+ + E Sbjct: 243 EDMIKSGE 250 >gi|86742202|ref|YP_482602.1| extracellular solute-binding protein [Frankia sp. CcI3] gi|86569064|gb|ABD12873.1| amino acid ABC transporter substrate-binding protein, PAAT family [Frankia sp. CcI3] Length = 296 Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats. Identities = 49/258 (18%), Positives = 94/258 (36%), Gaps = 11/258 (4%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 T + + + G + G F +G +GFDV+ + ++ A+ K+ Y+ Sbjct: 45 TAGTTMARLHDAGKIIIGTKFDQNLFGLKNLSGQPEGFDVEISKIVTDALGIPRDKVSYV 104 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSV 140 + R +Q ++D++ R+ + A Y GQ ++ K I+ Sbjct: 105 ETVSANREPFIQQGRVDLVVATYTINDKRKKVVDFA--GPYYVSGQSIMVSKNNTDITGK 162 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L+G +C +G+T + ++F+ + A + + DA T D Sbjct: 163 DTLAGKKVCSVSGSTPAENIRRVAPTAQ----LVLFDVYSKCADALKNGQVDAVTTDKGI 218 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE--ELGITQ 258 L L + P ++ +K P + +GD + N ++ T A E T Sbjct: 219 LLGL--VDKDPDAFKVVGGTFTKEPYGIGLKKGDDAFRNFINDTLEAAYKDGRWEKAYTS 276 Query: 259 KNINQVSKDTTNPDVQRF 276 T P V R+ Sbjct: 277 TLGKVEPTVPTPPAVDRY 294 >gi|229553193|ref|ZP_04441918.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus rhamnosus LMS2-1] gi|229313489|gb|EEN79462.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus rhamnosus LMS2-1] Length = 294 Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats. Identities = 49/255 (19%), Positives = 93/255 (36%), Gaps = 14/255 (5%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + IL + K + G+ F + G +GFDVD +A++ I Q Sbjct: 49 ADRDILTNAKATNTIIWGVKADTRLFGLMNIKTGKIEGFDVDMAKAITKQILGKKGNAQL 108 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + + + R ++ +D + T R+ L F + + GQ ++ K I SV Sbjct: 109 VQVTSDTRVPMIKGGNLDAVIATMTITPERQK--ILDFSDVYFNAGQSLLVKKGSPIKSV 166 Query: 141 SQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L G + G+ + D K + + A ++ + DA T D Sbjct: 167 KDLKKGTKVIGVQGSNSV----DNVKKAAPDTTVLQLADYAQAFTALKSGQGDALTTDNG 222 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 LY + + +++ +K P AI +G + V+ A+ ++ G K Sbjct: 223 ILYGMSEQDKN---YIVTGGTFTKEPYGIAINKGQKPFVKAVN---KAIKQLKQNGTYAK 276 Query: 260 NINQVSKDTTNPDVQ 274 I + D ++ Sbjct: 277 LIKKWFGDVPGFSLK 291 >gi|241113597|ref|YP_002973432.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240861805|gb|ACS59471.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 261 Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats. Identities = 55/285 (19%), Positives = 100/285 (35%), Gaps = 25/285 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + F +I L F ++ A L DI RG L+ + F V + G+D Sbjct: 2 LTRRVFFAIATLAATFGFGSASYADALADITARGTLRVAVPQDFPPFGSVGTDMAPMGYD 61 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D ++ + K + +P+ + R LQ+ ++D++ + RE + Sbjct: 62 IDVANLIAEKLG---VKTELVPVTSANRVPYLQTNKVDLVISSLGKNAEREKVIDFTTAY 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +F+G I+ V L+G SI V G +L L A +E Sbjct: 119 APFFNG--VFAPADVSIAKVEDLAGKSIGVTRGAVEDLELTKIAPA---DATIKRYEDNN 173 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +A+ + + D A+ P + + +I SP + + T Sbjct: 174 GTISAFLSGQVDTIATGNVVAAAILA--KNPPKRPEMKFLIKNSPCYIGLNKEQTALLEK 231 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNI 285 V+ A T L Q++LG D S++ Sbjct: 232 VNGIIAAAKTDGALNAIS---------------QKWLGADLPSDL 261 >gi|302872379|ref|YP_003841015.1| extracellular solute-binding protein family 3 [Caldicellulosiruptor obsidiansis OB47] gi|302575238|gb|ADL43029.1| extracellular solute-binding protein family 3 [Caldicellulosiruptor obsidiansis OB47] Length = 266 Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats. Identities = 59/276 (21%), Positives = 102/276 (36%), Gaps = 16/276 (5%) Query: 1 MYKDFFVSILCLI-----ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 MYK F V +L + + +S + N + L IKK G++ N + Sbjct: 1 MYKKFVVLVLLVAFFIPLLSGCSSNNQNMTTLEKIKKTKEFAVGMDNTFPPMEFADDNNN 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFDVD ++ + +K++ + ++ AL+SK+ D + T R+ + Sbjct: 61 TVGFDVDLANEIAKKLG---AKLKIVTVDWSGIQSALKSKKFDAIISCFSITDERKKA-- 115 Query: 116 LAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + Q + + I S L G I VQA TT + + K N + Sbjct: 116 FNLAGPYLYIRQVIAVKRGDSSIKSFEDLKGIKIGVQANTTGDSAVQK-MKFINYEKDVT 174 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +ER+ + R A D Y K P + I P + K P+ A+ + D Sbjct: 175 RYERITDAFNDLDIGRIKAVVIDSVVAYYYKKQ--NPEKFDIAPAELEKEPVGIALRKED 232 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 E YN + + + + +D T+ Sbjct: 233 KELYNEIQKILDQLKKDGTIAKISE--KWFGEDITD 266 >gi|317123707|ref|YP_004097819.1| amino acid ABC transporter substrate-binding protein, PAAT family [Intrasporangium calvum DSM 43043] gi|315587795|gb|ADU47092.1| amino acid ABC transporter substrate-binding protein, PAAT family [Intrasporangium calvum DSM 43043] Length = 334 Score = 170 bits (430), Expect = 3e-40, Method: Composition-based stats. Identities = 55/261 (21%), Positives = 95/261 (36%), Gaps = 17/261 (6%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDD 74 S S + I +RG L G++ F +GFD+D RA++ ++ Sbjct: 72 LPASSSITDGSVRAILERGHLTVGVSADTYLFGARDPFTNRIEGFDIDIARAVAQSLLGS 131 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 SK+++ + A +R L+ +++D+++RN T R + + Y GQ ++ K Sbjct: 132 ASKVRFRVITAADRIEVLEKREVDMVARNMTMTCARWEQIAFSSE--YYHSGQKLLVAKD 189 Query: 135 K----GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190 +++ L G +C GT+T L + ++ R Sbjct: 190 PSGAVPDTTIEDLKGKRVCAPRGTSTLEKLRSV-----KGVEAVPAADHTGCLVLFQQGR 244 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 DA TGD + L L P V I+ P Q D V+ Sbjct: 245 ADAITGDDTVLAGLAAQ--DPYTVVSSAPAITDEPYGLGFNQADVYLVRYVNRVL---AD 299 Query: 251 AEELGITQKNINQVSKDTTNP 271 + G + N+ DT P Sbjct: 300 LKADGRWKATYNRWLADTLGP 320 >gi|322831658|ref|YP_004211685.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602] gi|321166859|gb|ADW72558.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602] Length = 263 Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats. Identities = 47/259 (18%), Positives = 98/259 (37%), Gaps = 11/259 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + +L + S A L DI+KRG L+ + F V + +G+D Sbjct: 3 MNKRLL-AWAGAAMLVLQASSVMADQLQDIQKRGVLRVAVPQDFPPFGSVSKDLQPEGYD 61 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D L+ + K+Q +P+ + R LQ+ ++D++ + RE + + Sbjct: 62 IDMAHYLADKM---KLKLQLVPVTSANRVPYLQTDKVDLVISSLGKNAEREKVIDFSNAY 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +F G + +S + +LSG +I V G +L L +E Sbjct: 119 APFF--LGVFGAQGDKLSDLKELSGKTIGVTRGAVEDLALTGVAPK---DAKIQRYEDNN 173 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +AY + + + + A+ P++ + ++ SP + + + + Sbjct: 174 TTLSAYLSGQVEYIATGNLVVAAIARM--NPAKAPVSKVMLKDSPCYVGLRKDEPALKDK 231 Query: 241 VSWTHYAMVTAEELGITQK 259 V+ + + L + Sbjct: 232 VNELIAEGIKDKTLNALSE 250 >gi|242238356|ref|YP_002986537.1| extracellular solute-binding protein family 3 [Dickeya dadantii Ech703] gi|242130413|gb|ACS84715.1| extracellular solute-binding protein family 3 [Dickeya dadantii Ech703] Length = 254 Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats. Identities = 47/255 (18%), Positives = 99/255 (38%), Gaps = 11/255 (4%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 + +L + S A L DI++RG L+ + F V + +G+D+D R L+ Sbjct: 1 MAGAALLIMQAGSAMADQLQDIQQRGVLRVAVPQDFPPFGSVGTDLQPQGYDIDVARYLA 60 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 + K+Q +P+ + R LQ+ ++D++ + RE + + +F G Sbjct: 61 GEM---KLKLQLVPVTSANRVPYLQTDKVDLVISSLGKNAEREKVIDFSRAYAPFF--LG 115 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 K+ +SS L G ++ V G ++ L D +E +AY + Sbjct: 116 VFGPKEGDVSSPDALQGKTVGVTRGAVEDMVLTDIAPK---TADVKRYEDNNTTLSAYLS 172 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 + + A+ P++ + ++ SP + + + V+ Sbjct: 173 GQVQYIATGNLVVAAIA--EKNPTKAPVAKFMLKDSPCFIGLKKDEPALKAKVNALIEKA 230 Query: 249 VTAEEL-GITQKNIN 262 + L G+++K + Sbjct: 231 IKDNTLNGLSEKWLK 245 >gi|28377714|ref|NP_784606.1| glutamine ABC transporter, substrate binding protein [Lactobacillus plantarum WCFS1] gi|28270547|emb|CAD63451.1| glutamine ABC transporter, substrate binding protein [Lactobacillus plantarum WCFS1] Length = 278 Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats. Identities = 44/286 (15%), Positives = 95/286 (33%), Gaps = 24/286 (8%) Query: 1 MYK-DFFVSILCLIILFFTSFSTNA--------SILGDIKKRGFLKCGINTGLVGFAEVK 51 M K + L ++ + + +L + K + G+ F + Sbjct: 1 MKKLKRLIGALGMLAMLVVVLTACGSRQSLAKQDVLTNDKASKTITWGVKADTKLFGLMD 60 Query: 52 -ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 + KGFD D AL+ + + +++ + ++ R L++ ID + T R Sbjct: 61 VKDNQIKGFDADIATALTKRVLGKNATAKFVQVTSQTRIPLLKNGNIDAILATMTITPER 120 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHN 168 E + + GQ ++ K I SV L+ G + G + + Sbjct: 121 EKQVDFTNS--YFDAGQSLLVKKGSAIKSVKDLNKSGTKVLGVTGANSVENIKKAAPKA- 177 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 + + A ++ + A T D LY + N + ++ +K P Sbjct: 178 ---KVLELSDYAQAMTALKSGQGVALTTDNGILYGMASQNPG---YEVVGGTFTKEPYGI 231 Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 A+ +G ++ + E G + + + + D + Sbjct: 232 AVNKGQEPLKKALNKALKEI---EADGTYNRILKKWFGNVAGFDYK 274 >gi|295692439|ref|YP_003601049.1| glutamine ABC transporter, glutamine-binding protein [Lactobacillus crispatus ST1] gi|295030545|emb|CBL50024.1| Glutamine ABC transporter, glutamine-binding protein [Lactobacillus crispatus ST1] Length = 272 Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats. Identities = 46/281 (16%), Positives = 103/281 (36%), Gaps = 17/281 (6%) Query: 1 MYKDFFV--SILCLIILFFTSFSTN--ASILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55 M K F + SI+ L L + N ++ +K + G+ F+ + G Sbjct: 1 MRKKFLLIISIVVLFALPLSGCKQNKKQNVYQAVKTSKTINWGVKADTPLFSSINIKTGK 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GF++D AL+ + +K ++ A + L++ +D + T R+ + Sbjct: 61 LNGFEIDLANALTHEMLGKNAKANFITTTANTKIQLLKNTNVDAVIAAMTITPERKKQVE 120 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + + GQ ++ I + L+ + V GTT + + Sbjct: 121 FSH--PYFPAGQSIMVADSSAIKNAKNLNNKKVLVVKGTTAADAIHQVAAKA----EILQ 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F+ + AA +A + DA+ D L + S + ++ + P A+ +G Sbjct: 175 FDDYGQAFAALKAGQGDAFVTDNGILAGI---LRDSSGYKLVGGTFTNQPYGIAVNKGQN 231 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRF 276 +++ + A+ E+ G + + + +++ Sbjct: 232 ---DMLKHINTALAKLEKNGTYNHLVKKWFGNIPGMNIKEL 269 >gi|330971844|gb|EGH71910.1| extracellular solute-binding protein [Pseudomonas syringae pv. aceris str. M302273PT] Length = 261 Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats. Identities = 53/274 (19%), Positives = 101/274 (36%), Gaps = 14/274 (5%) Query: 1 MYKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + + L L + +A+ L D+ RG LK + F V + +G Sbjct: 1 MTKRYSALLTALFASLMLSQTPAHANGLDDVVARGTLKVAVPQDFPPFGSVGPDMKPRGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D + L+ + K++ P+N+ R L + ++D++ + RE + + Sbjct: 61 DIDTAQLLADKL---KVKLELTPVNSTNRIPFLTTGKVDLVISSLGKNPDREKVIDFSRA 117 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 ++ I ++ L G +I V G ++ L++ FE Sbjct: 118 YAPFY--LAVFGPPDSPIKDIADLKGKTISVTRGAIEDIELSNVAPE---GATIKRFEDN 172 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AAY A + D + A+ + P + + SP+ + +G E Sbjct: 173 NSTIAAYLAGQTDLIASGNVVMVAI--SERNPKRIPAMKVKLKDSPVYVGVNKGQPELLG 230 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 V+ A A+ G +K + KD D+ Sbjct: 231 KVNEILNA---AKADGTLEKASQKWLKDPLPADL 261 >gi|222529920|ref|YP_002573802.1| extracellular solute-binding protein family 3 [Caldicellulosiruptor bescii DSM 6725] gi|222456767|gb|ACM61029.1| extracellular solute-binding protein family 3 [Caldicellulosiruptor bescii DSM 6725] Length = 266 Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats. Identities = 66/291 (22%), Positives = 112/291 (38%), Gaps = 33/291 (11%) Query: 1 MYKDFFVSILCLIILFF------TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54 MYK ++++ LI LF TS N + L IKK G++ N Sbjct: 1 MYKK-VIALVLLIALFIPFLSGCTSNDQNMTTLEKIKKTKEFVVGMDNTFPPMEFTDDNN 59 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + GFDVD ++ + +K++ + ++ AL+SK+ D + T R+ + Sbjct: 60 NTVGFDVDLANEIAKKLG---AKLKIVAVDWSGIQSALKSKKFDAIISCFSITDERKKA- 115 Query: 115 GLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + Q + K I S L G I VQA TT + + K N + Sbjct: 116 -FNLAGPYLYIRQVIAVKKGDSSIKSFEDLKGIKIGVQANTTGDNAVQK-MKFINYEKDV 173 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 +ER+ + R A D Y K P + I P + + P+ A+ + Sbjct: 174 TRYERITDAFNDLDIGRIKAVVIDSVVAYYYKKQ--NPEKFDIAPAQLEREPVGIALRKE 231 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV-QRFLGIDKSS 283 D + YN + QK ++Q+ KD T + +++ G D + Sbjct: 232 DKDLYNEI----------------QKILDQLKKDGTIAKISEKWFGEDITK 266 >gi|282864976|ref|ZP_06274030.1| extracellular solute-binding protein family 3 [Streptomyces sp. ACTE] gi|282560401|gb|EFB65949.1| extracellular solute-binding protein family 3 [Streptomyces sp. ACTE] Length = 304 Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats. Identities = 51/251 (20%), Positives = 95/251 (37%), Gaps = 13/251 (5%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 + +RG+L G E A+G + GFD++ R +++++ +P KI++ Sbjct: 52 KSPTWRKAHRRGYLVVGAKEDQPYLGEKDPASGVYSGFDIEIARMMAASLGFEPKKIRFR 111 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSV 140 + + R ALQ+ QID +R+ +G A Y GQG ++ + I Sbjct: 112 TIASANRETALQNGQIDYYVGTYTINDMRKKIVGFA--GPYYMAGQGLLVRTDENDIHGP 169 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L+G ++C AG+T +A + + ++ + DA T D + Sbjct: 170 QDLAGKTVCSAAGSTPYQRIAADYPKA----KLVAYDTYSICVDNLLTFQVDAVTTDDAI 225 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L P E ++ S+ P + + D + A E+ G +K Sbjct: 226 LLGFAAKA--PDEMKVVGKPFSEEPYGIGVPRSDNALRLALDDALEAN---EKNGNWKKA 280 Query: 261 INQVSKDTTNP 271 + P Sbjct: 281 FEATLGLSGVP 291 >gi|50122416|ref|YP_051583.1| putative amino acid ABC transporter substrate binding protein [Pectobacterium atrosepticum SCRI1043] gi|49612942|emb|CAG76393.1| putative amino acid ABC transporter, substrate binding protein [Pectobacterium atrosepticum SCRI1043] Length = 268 Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats. Identities = 45/240 (18%), Positives = 93/240 (38%), Gaps = 10/240 (4%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K ++++ +L + S A L DI+KRG L+ + F V + +G+D+D Sbjct: 9 KKGLLAVMGAAMLLVQAGSVMADQLQDIEKRGVLRVAVPQDFPPFGSVGTDLQPQGYDID 68 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 R L+ + +Q +P+ + R LQ+ ++D++ + RE + + Sbjct: 69 IARYLAKEM---KLTLQLVPVTSANRVPYLQTNKVDLVISSLGKNAEREKVIDFSRAYAP 125 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 +F G K ++S L G SI V G ++ L + +E Sbjct: 126 FF--LGVFGPKDSALASSEALEGKSIGVTRGAVEDMVLTETAPKAA---QIKRYEDNNTT 180 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 +AY + + + + A+ P++ + ++ SP + + + V Sbjct: 181 LSAYLSGQVEFVATGNLVVAAIA--EQNPTKAPVAKFMLKDSPCYIGMKKDEPALKAKVD 238 >gi|257056747|ref|YP_003134579.1| amino acid-binding protein [Saccharomonospora viridis DSM 43017] gi|256586619|gb|ACU97752.1| amino acid-binding protein [Saccharomonospora viridis DSM 43017] Length = 304 Score = 169 bits (429), Expect = 4e-40, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 95/259 (36%), Gaps = 15/259 (5%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 + +KK G + G+ G++ GFDV+ R +S+ + DP KI+Y Sbjct: 55 SPTFDQMKKTGHVVVGVKDDQPNLGYKDPTSGEYSGFDVEIARLISAKLGFDPKKIEYKA 114 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVS 141 + + R A+ + + R+ + A + GQG ++ K + I Sbjct: 115 VPSAGREQAIINGDVHYYVGTYTINDKRKQQISFA--GPYFVAGQGLLVAKDNEDIKGKD 172 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L G +C +G+T + D + + + + + + + D T D + L Sbjct: 173 DLKGKKVCSVSGSTPIQNVRD--EGLTEPENIVELQTYSQCVSELLNGQVDVVTTDDAIL 230 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 P E ++ + ++ P + + D + V+ A E G Q+ Sbjct: 231 LGYAAQQ--PDELKVVGEPFTEEPYGVGLPKEDDALRDKVNDILE---EAMEDGTWQEIY 285 Query: 262 NQVSKDTTN----PDVQRF 276 + + P++ R+ Sbjct: 286 DATLGKSGTQAEMPEIDRY 304 >gi|319761717|ref|YP_004125654.1| extracellular solute-binding protein family 3 [Alicycliphilus denitrificans BC] gi|317116278|gb|ADU98766.1| extracellular solute-binding protein family 3 [Alicycliphilus denitrificans BC] Length = 286 Score = 169 bits (429), Expect = 4e-40, Method: Composition-based stats. Identities = 50/279 (17%), Positives = 106/279 (37%), Gaps = 17/279 (6%) Query: 2 YKDFFVSILCLII---LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWK 57 F ++ + + S S +A L +IK + L CG + F + Sbjct: 4 KIRLFSTLAATAMGLGVAALSASAHADQLANIKAKKTLVCGTFAAIPPFGYPDPKTRETI 63 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G D++ CRA++ + + + L+ IDI+ N +T R + + Sbjct: 64 GSDIELCRAVAKEMGVNA---EIRGFPVGVHIPELKLGHIDIIIANMGYTKTRAEQVEFS 120 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + ++ K GI ++S L G I G+T+E + K P+ ++ Sbjct: 121 DA--YNVGAEVAVVPKDSGIKTLSNLDGKKISATKGSTSETAIKLRLKEAQ----PLTYQ 174 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTE 236 A + + DA+ + + A + + P V+L + + P+ + +G+T Sbjct: 175 DASSAFLALQQGKVDAFVINNVSAAAFANQSQKGPKPSVVLDEPLYVQPVVIGMTKGETA 234 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 ++ E+ G ++ N+ D ++ ++R Sbjct: 235 LIREINTILR---KLEDSGYMDQHWNKWFGDGSDYKLKR 270 >gi|258540197|ref|YP_003174696.1| amino acid ABC transporter substrate-binding periplasmic protein [Lactobacillus rhamnosus Lc 705] gi|257151873|emb|CAR90845.1| ABC transporter, amino acid-binding periplasmic protein [Lactobacillus rhamnosus Lc 705] Length = 274 Score = 169 bits (429), Expect = 4e-40, Method: Composition-based stats. Identities = 49/255 (19%), Positives = 93/255 (36%), Gaps = 14/255 (5%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + IL + K + G+ F + G +GFDVD +A++ I Q Sbjct: 29 ADRDILTNAKATNTIIWGVKADTRLFGLMNIKTGKIEGFDVDMAKAITKQILGKKGNAQL 88 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + + + R ++ +D + T R+ L F + + GQ ++ K I SV Sbjct: 89 VQVTSDTRVPMIKGGNLDAVIATMTITPERQK--ILDFSDVYFNAGQSLLVKKGSPIKSV 146 Query: 141 SQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L G + G+ + D K + + A ++ + DA T D Sbjct: 147 KDLKKGTKVIGVQGSNSV----DNVKKAAPDTTVLQLADYAQAFTALKSGQGDALTTDNG 202 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 LY + + +++ +K P AI +G + V+ A+ ++ G K Sbjct: 203 ILYGMSEQDKN---YIVTGGTFTKEPYGIAINKGQKPFVKAVN---KAIKQLKQNGTYAK 256 Query: 260 NINQVSKDTTNPDVQ 274 I + D ++ Sbjct: 257 LIKKWFGDVPGFSLK 271 >gi|264679052|ref|YP_003278959.1| amino-acid ABC transporter bindingprotein ybeJ precursor [Comamonas testosteroni CNB-2] gi|262209565|gb|ACY33663.1| amino-acid ABC transporter bindingprotein ybeJ precursor [Comamonas testosteroni CNB-2] Length = 303 Score = 169 bits (429), Expect = 4e-40, Method: Composition-based stats. Identities = 46/250 (18%), Positives = 91/250 (36%), Gaps = 9/250 (3%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR----ALSSAIFDDPSKIQYL 81 L I+ G + G+ + NG + GF V+ C + + +I+Y Sbjct: 20 TLDRIRDTGVVTMGVREASGTMSYTLGNGKYAGFHVELCEKALARMQQQLKLPRLEIRYQ 79 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 + A+ R + + +D+ T R+ + A P Y + + K GI+ V+ Sbjct: 80 MVTAQNRVPLVANGTVDVECGTTTNNAARQKEVAFA--PTVYMEEVRTAVRKSSGITEVA 137 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 QL G + G T L + K + ++ ++ + E R DA D L Sbjct: 138 QLKGRKVAATTGATAVTLLRRFSKEKGVDFNVLMAKDNAECFVLLETGRADACVADGQIL 197 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 + P ++ I+ + S P+A + + E+ + M ++ E+ Sbjct: 198 ASGLSRLRDPGQYAIVGEPFSVEPIAIMLDRKSPEFKKLFDAQIREMASSGEV---AALY 254 Query: 262 NQVSKDTTNP 271 ++ P Sbjct: 255 DKWFMKPVPP 264 >gi|284992299|ref|YP_003410853.1| family 3 extracellular solute-binding protein [Geodermatophilus obscurus DSM 43160] gi|284065544|gb|ADB76482.1| extracellular solute-binding protein family 3 [Geodermatophilus obscurus DSM 43160] Length = 296 Score = 169 bits (429), Expect = 5e-40, Method: Composition-based stats. Identities = 42/232 (18%), Positives = 84/232 (36%), Gaps = 10/232 (4%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 S + ++ + G + G GF G +GFDV+ + ++ + P +I++ Sbjct: 46 AGSTMAELAEAGTITVGTKFDQPGFGLANPQGVPEGFDVEVTKIIAGELGIAPEEIEWKE 105 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSV 140 + R +Q+ +DI+ R+ + A Y GQ ++ I Sbjct: 106 TVSANRESFIQNGDVDIVVATYTINDARKQLIDFA--GPYYVAGQDIMVATGNPLAIEGP 163 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L+G +C G+T + D + +F+ + A R + DA T D Sbjct: 164 DDLAGKRVCSVEGSTPAQNIRDNYPEAQ----LTLFDVYSKCADALRNGQVDAVTTDNVI 219 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 L L ++ + ++ P + +GD E+ ++ T Sbjct: 220 LTGLVQGGQ--GAFELVGNPFTQEPYGIGLTKGDDEFRGFINDTLEQAFEDG 269 >gi|296532448|ref|ZP_06895172.1| ABC superfamily ATP binding cassette transporter, binding protein [Roseomonas cervicalis ATCC 49957] gi|296267223|gb|EFH13124.1| ABC superfamily ATP binding cassette transporter, binding protein [Roseomonas cervicalis ATCC 49957] Length = 299 Score = 169 bits (429), Expect = 5e-40, Method: Composition-based stats. Identities = 53/247 (21%), Positives = 96/247 (38%), Gaps = 5/247 (2%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 S S L IK RG L G + + A+G +G D+D R L+ ++FDDP+K+++ Sbjct: 42 SAGRSRLQMIKDRGRLIVGTGSTNPPWHFEGADGKLQGMDIDLARLLAKSLFDDPNKVEF 101 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG-FIMHKKKGISS 139 + + R +L + ++DI+ + T R + Y +G ++ + + Sbjct: 102 VLQGSDARIPSLITDKVDIVVQWMTVTPGRAQQVEFTI--PYYREGVTLLLLARGAKYQN 159 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + A V G + + ++ + + FE + + A A R DAY D S Sbjct: 160 YDAMKAAGNAVTVGGMQNVFMEEWVRKALPQAKVDAFESPDAVLQALNARRIDAYMADQS 219 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 A L P V + A A+ GD W N V+ + + + Sbjct: 220 --AARWLMQQTPGRFVDAGYGWMPNSYASAVKPGDPVWLNWVNTVYKEAMMGVDFDYFAA 277 Query: 260 NINQVSK 266 + + Sbjct: 278 SYKKWFG 284 >gi|298294202|ref|YP_003696141.1| extracellular solute-binding protein family 3 [Starkeya novella DSM 506] gi|296930713|gb|ADH91522.1| extracellular solute-binding protein family 3 [Starkeya novella DSM 506] Length = 260 Score = 169 bits (429), Expect = 5e-40, Method: Composition-based stats. Identities = 49/258 (18%), Positives = 93/258 (36%), Gaps = 11/258 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + ++ + A L DI R ++ + T F V A+ +G D Sbjct: 1 MTTRILFAAAIGLMATLGAVPAVADALDDIIARKTIRVAVPTDYPPFGSVGADMQPRGMD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + K++ +P+ A R LQS + D+ + T R + + Sbjct: 61 IDVANLIGEKLG---VKVELVPVTAPNRVAFLQSGKTDLTISSLGKTEERAKVIDFSIAY 117 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +FD K+ + + LSG I V G+ + LAD FE Sbjct: 118 SPFFDA--IFGKKEPPVKEYADLSGKKISVTRGSMQDKELADLAPKA----VVQRFEDNN 171 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 AA+ + + + + A+K P + L +++ SP +++G+T + Sbjct: 172 STIAAFMSGQVEMFASGTPVAAAIKRR--NPDLDLELKIVLANSPCYVGVVKGETRLLDK 229 Query: 241 VSWTHYAMVTAEELGITQ 258 V+ E+ Sbjct: 230 VNEIIREAKAKGEIDKLS 247 >gi|296103000|ref|YP_003613146.1| allantoate transport periplasmic binding protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057459|gb|ADF62197.1| allantoate transport periplasmic binding protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 268 Score = 169 bits (429), Expect = 5e-40, Method: Composition-based stats. Identities = 48/263 (18%), Positives = 97/263 (36%), Gaps = 13/263 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L + T+ S A L DI+KRG ++ + F V + +G+D Sbjct: 9 MKK--LLIALAGAVCLLTNLSAKADQLQDIEKRGTIRIAVPQDFPPFGSVGTDLQPQGYD 66 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D R L+ + K+Q +P+ + R LQ+ ++D++ + RE + + Sbjct: 67 IDMARYLAKQM---KVKLQLVPVTSANRVPYLQTDKVDLVISSLGKNAEREKVIDFSRAY 123 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +F G K + + LSG +I V G ++ L +E Sbjct: 124 APFF--LGVFGPKGAELKDAAALSGKTIGVTRGAVEDMVLTSLAPK---DADVKRYEDNN 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +AY + + + A+ N + + ++ SP + + + Sbjct: 179 TTLSAYLSGQVQYVATGNLVVAAISRQNAEKA--PVPSFMLKDSPCFIGLKKNEPALKAK 236 Query: 241 VSWTHYAMVTAEEL-GITQKNIN 262 V + L G +++ + Sbjct: 237 VDALIEQGINDGTLNGFSEQWLK 259 >gi|171316136|ref|ZP_02905361.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MEX-5] gi|171098740|gb|EDT43534.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MEX-5] Length = 268 Score = 169 bits (429), Expect = 5e-40, Method: Composition-based stats. Identities = 44/266 (16%), Positives = 98/266 (36%), Gaps = 15/266 (5%) Query: 2 YKDFFVSILCL-IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + +++ ++ F + A L I K G L+ + F V A+ +G+D Sbjct: 10 RRAWLAALIAAPVMALFVAAPARADALDTIAKSGALRVAVPEDYPPFGSVGADMQPQGYD 69 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D L+ ++ K++ +P+N+ R L + ++D++ + T RE + + Sbjct: 70 IDMAELLAKSLG---VKLKLVPVNSANRIPYLTTNKVDMVISSLGKTPEREKVVDFSTAY 126 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+ QG +S+ + L+G ++ G E+ L+ +K FE Sbjct: 127 APYY--QGVFGPADVKVSTPADLNGKTVGATRGALEEIALSQLAPNATIK----RFEDNN 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A+ + + A+ P + +I SP + + + Sbjct: 181 ATIQAFLSGQVQLIAAGNIVAAAILA--KNPPRRPEVKFVIKNSPCFVGVNKNEARLLAK 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSK 266 + A+ A++ G + Sbjct: 239 IDD---AIAHAKQDGTLSAMSKKWLG 261 >gi|302388265|ref|YP_003824087.1| extracellular solute-binding protein family 3 [Clostridium saccharolyticum WM1] gi|302198893|gb|ADL06464.1| extracellular solute-binding protein family 3 [Clostridium saccharolyticum WM1] Length = 299 Score = 169 bits (428), Expect = 6e-40, Method: Composition-based stats. Identities = 57/301 (18%), Positives = 107/301 (35%), Gaps = 48/301 (15%) Query: 1 MYKDFFVSILCLIILFFTSFSTN-------------------------------ASILGD 29 M K +++ + T+ T A+ + Sbjct: 2 MKKMLSLALAFAAVASLTACGTKAPETTTAAPAETTAKEGTGTAGSTEAAGKGLAADVQK 61 Query: 30 IKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFD-------DPSKIQYL 81 I RG LK G + F+ A G+++GF+ D ++ IF + +++ Sbjct: 62 IIDRGVLKVGCKADIPKFSLQNTATGEYEGFEDDLAYEIAGTIFGCTAAEAKEKKLVEFQ 121 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 + AK R L++ +ID++ T R+ + Y D G +++K+ GI S+ Sbjct: 122 GVTAKTRGPLLENGEIDLVIATFTITPERKETYNF--STPYYTDAVGLLVNKESGIDSIE 179 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHP--IVFERVEEIDAAYRAHRCDAYTGDIS 199 L G I V +TT+ Y +K +P F+ + A + D ++ D + Sbjct: 180 DLDGKIIGVAQSSTTKDGFKKYVDEKGLKVNPQFQEFDGYPALAQALATKQIDCFSVDRA 239 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L + IL D ++ A + +T V +M++ L Q Sbjct: 240 ILAGYVN-----DGNQILQDRFAEQDYGVAAAKENTGLAAFVDEKITSMLSDGSLKALQD 294 Query: 260 N 260 Sbjct: 295 Q 295 >gi|161507107|ref|YP_001577061.1| glutamine-binding protein precursor [Lactobacillus helveticus DPC 4571] gi|160348096|gb|ABX26770.1| Glutamine-binding protein precursor [Lactobacillus helveticus DPC 4571] Length = 272 Score = 169 bits (428), Expect = 6e-40, Method: Composition-based stats. Identities = 41/265 (15%), Positives = 96/265 (36%), Gaps = 13/265 (4%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIF 72 L N ++ +K+ + G+ F G +GF++D AL+ + Sbjct: 19 ALTACGKRNNQNVYQKVKESKHIIWGVRADTRLFGLTNVKTGKIEGFEIDLAHALTKQML 78 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 + ++ A R L++ ID + T R + + G ++ Sbjct: 79 GKDATASFVTTTANTRIPLLKNGNIDAVLATMTITPERAKQVDF--SKPYFPAGSSLLVP 136 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 I +V L+G ++ GTT + + + ++ + +A +A++ Sbjct: 137 DNSKIKNVKDLNGETVLAVKGTTAVNDVHKFEPKA----RVLQYDDYGQAMSALKANQGV 192 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 A T D L + N + ++ + + +P A+ +G ++V + A+ + Sbjct: 193 ALTTDNGLLAGIAQENPG---YKLVGGVYNNAPYGIAVNKGQ---KDMVDHINKALDQLK 246 Query: 253 ELGITQKNINQVSKDTTNPDVQRFL 277 + G+ + I + ++ L Sbjct: 247 KNGMYDRLIKKWFAGIPGFSLKGVL 271 >gi|158334719|ref|YP_001515891.1| extracellular solute-binding protein [Acaryochloris marina MBIC11017] gi|158304960|gb|ABW26577.1| extracellular solute-binding protein, family 3 [Acaryochloris marina MBIC11017] Length = 322 Score = 169 bits (428), Expect = 6e-40, Method: Composition-based stats. Identities = 44/276 (15%), Positives = 107/276 (38%), Gaps = 13/276 (4%) Query: 1 MYKDFFVSILCLIILFFTS-FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + + ++IL ++ + + F+ S+L +++ G L G + FA G +G+ Sbjct: 24 LRRPKTIAILTILFTYLGAPFAAAESVLEKVQRTGQLTAGTSQEAQPFAFADEQGQLQGY 83 Query: 60 DVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 ++ + + + ++Q + +N ++R L ++DI+ + +T R+ + Sbjct: 84 SIEMLQLIKDQLTKELGREVQLQLVAINPEDRIPKLVQGKVDIVCDASSYTWERDKQIDF 143 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + G ++ ++ L+ I A TT E + ++ Sbjct: 144 SVS--YGLTGTRLLVKQENAAWETPDLANKKIAALAATTNETAIRRAQPQAQ----IVIV 197 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + E A + + DA+ D L A T PS I+ SK +A + + +++ Sbjct: 198 KNHGEGYDALQQGKVDAFAADGILLDAWLQTAKNPSAFNIIG-YFSKEGIACMMPENNSK 256 Query: 237 WYNIVSWTHYAMVTAEELGITQ--KNINQVSKDTTN 270 + + V+++ + G + ++ D Sbjct: 257 FADQVNYSLVRFMQGYLQGKASYVETFDRWFGDQAK 292 >gi|90962416|ref|YP_536332.1| glutamine-binding protein [Lactobacillus salivarius UCC118] gi|301299224|ref|ZP_07205511.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus salivarius ACS-116-V-Col5a] gi|90821610|gb|ABE00249.1| Glutamine-binding protein [Lactobacillus salivarius UCC118] gi|300215039|gb|ADJ79455.1| Glutamine-binding protein [Lactobacillus salivarius CECT 5713] gi|300853184|gb|EFK80781.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus salivarius ACS-116-V-Col5a] Length = 276 Score = 169 bits (428), Expect = 6e-40, Method: Composition-based stats. Identities = 48/283 (16%), Positives = 102/283 (36%), Gaps = 21/283 (7%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKR----GFLKCGINTGLVGFAEVK-AN 53 M + + L+++FF +I +R + G+ F + Sbjct: 1 MKNLRKVTLLFSALLMIFFLGACGKKDKAANIAQRTEQTKTVTWGVKADTRLFGLMNIKT 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G +GFDVD +AL+ ++ +K++ + AK + L+++ ID + T R Sbjct: 61 GQIEGFDVDMAKALTKKMYGKDAKVKLVQTTAKTKIPLLKNQNIDAVIAAMTITPERRKI 120 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKY 171 + + + GQ ++ I +V L G + GTT + + Sbjct: 121 VEFSQ--PYFAAGQSLLVPDNSTIKNVHDLDKKGMVVLAVKGTTAVANIHKFAPKA---- 174 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + F+ + A ++ + A + D L + N + ++ + P A+ Sbjct: 175 KVLEFDDYGQAFTALKSGQGQAMSTDNGILAGIASENPG---YQVVGGNFTNEPYGIAVD 231 Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 +G T+ + A+ + G K I + + D + Sbjct: 232 KGQTQMMKRID---KALDELKADGTYDKLIQKWFGNVKGFDAK 271 >gi|170749711|ref|YP_001755971.1| extracellular solute-binding protein [Methylobacterium radiotolerans JCM 2831] gi|170656233|gb|ACB25288.1| extracellular solute-binding protein family 3 [Methylobacterium radiotolerans JCM 2831] Length = 280 Score = 169 bits (428), Expect = 6e-40, Method: Composition-based stats. Identities = 60/276 (21%), Positives = 103/276 (37%), Gaps = 20/276 (7%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 ++ L + + A + IKKRG L G+ F +G G + D Sbjct: 14 LSALAALSTVALPGRAAAADGVDAIKKRGTLIVGVKADYKPFGFRDPSGTIIGLEPDLAA 73 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 L+ + K++ +P+ + R LQ ++D+L R + A P Y D Sbjct: 74 DLAKRLG---VKLELVPVVSANRIEFLQQGKVDLLIATLSDKPERRRVVQ-AIDPNYYSD 129 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 ++ K GI+ +QL G +C +G +A + A + F+ E+ A Sbjct: 130 FVNVLLPKSSGITDWAQLKGKPLCATSGAWYNKDVARTYGA-----EIVAFDGSEKPLFA 184 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV---- 241 + C Y D S L L +D + + + I +P A+ QG+T V Sbjct: 185 LKQGNCIGYVYDQSMLQGKLLDDDWKANYALPLKGILDAPWMMAVAQGNTTLQAAVEDAT 244 Query: 242 -SWTHYAMVTAEELG------ITQKNINQVSKDTTN 270 W + EE K +++ K+ TN Sbjct: 245 KDWMKTGFIVNEEKKWGIEPTAYSKAMHEKYKNATN 280 >gi|154149175|ref|YP_001406108.1| amino acid [Campylobacter hominis ATCC BAA-381] gi|153805184|gb|ABS52191.1| amino acid [Campylobacter hominis ATCC BAA-381] Length = 270 Score = 169 bits (428), Expect = 6e-40, Method: Composition-based stats. Identities = 58/264 (21%), Positives = 112/264 (42%), Gaps = 22/264 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L L +A+ L +IK L+ G+ F+++K NG+++GF+ Sbjct: 1 MKKILVFLMFMLGFL-------SANSLNEIKSSKILRVGVFEAQPPFSQIKENGEFEGFE 53 Query: 61 VDFCRALSSAIF-DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 VD + ++ IF + I++ P+ A +R LQ+ +ID L T R S + F Sbjct: 54 VDLAKEIAKKIFGGNSGTIEFKPVLASDRLKVLQNNEIDFLIATFTITDER--SKVIDFS 111 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G + K GI + + L G +I + GTT E+ YF+ N ++ + + Sbjct: 112 NPYFAVNIGVVTRKDDGIKTFADLKGKTIIAEHGTTGEV----YFR--NQGFNILGCDGA 165 Query: 180 EEIDAAYRAH-RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + Y D + + + + S V + + + L + +G+ E Sbjct: 166 ANCYKMLKNTPDAAGYASDNTIVLTYAVIDK--SLEVNINSLGASDFLGIGVQKGNKELL 223 Query: 239 NIVSWTHYAMVTAEELGITQKNIN 262 NI++ ++ + G +K + Sbjct: 224 NIIND---ELIQLSKEGYFKKLFD 244 >gi|324997390|ref|ZP_08118502.1| putative glutamate binding protein [Pseudonocardia sp. P1] Length = 295 Score = 169 bits (428), Expect = 7e-40, Method: Composition-based stats. Identities = 44/256 (17%), Positives = 96/256 (37%), Gaps = 11/256 (4%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 + +++RG + G+ G A G++ GFD+D + ++ + P +I + Sbjct: 48 SPTFQAMQQRGRVVVGVKDDQPGLGFRDATTGEFSGFDIDVAKTVAGGLGFAPDQIDWKV 107 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVS 141 + + R ++ ++D R+ +G A Y GQG ++ + I+ Sbjct: 108 VPSAAREDVIERGEVDYYVGTYTINDKRKQRVGFA--GPYYTAGQGLLVRADENEITGPQ 165 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L G ++C G+T + D N+ + F+ + + DA T D + L Sbjct: 166 TLQGKTVCSVTGSTPIQRVRD----QNLTTSIVEFQTYTQCVDQLINGQVDAVTTDDAIL 221 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQKN 260 + P + ++ + S+ P + DT + V+ + I Sbjct: 222 LGYA--SQNPEQLKVVGETFSEEPYGIGVPLNDTAFRTKVNDLLQTAIDDGTWKTIYDGT 279 Query: 261 INQVSKDTTNPDVQRF 276 + + P ++R+ Sbjct: 280 LGKSGTPADPPQIERY 295 >gi|271500708|ref|YP_003333733.1| family 3 extracellular solute-binding protein [Dickeya dadantii Ech586] gi|270344263|gb|ACZ77028.1| extracellular solute-binding protein family 3 [Dickeya dadantii Ech586] Length = 278 Score = 169 bits (428), Expect = 7e-40, Method: Composition-based stats. Identities = 54/278 (19%), Positives = 104/278 (37%), Gaps = 20/278 (7%) Query: 4 DFFVSILCLIILFFTS--------FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 F S L L+ L + + S L + +RG L+ G F G+ Sbjct: 11 RLFASALVLLTLAGCTPTDEKKADNAAPQSALQTVLQRGTLRVGDCLSFAPFGFYDQAGN 70 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G+DVD +AL+ A+ K++ + + R LQ+ ++D++ N L R + Sbjct: 71 PDGYDVDLAKALAKAMG---VKLEMVNTTSANRIPNLQTNKVDVVFCNFTRNLER--AKE 125 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 ++F + ++ K GI S ++G +I G+T D + + Sbjct: 126 ISFTAPYVVASEAMLVRKNSGIQSAHDMAGKTIATVKGSTN----GDEVRNLGIDVKIQE 181 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 ++ + A + + DA D + L + V ++ A + QGD Sbjct: 182 YDSSQAAILAVKQGQADAMIEDNNFLAYQSKL--DSTLTVTNEALVPLEYNAFGVKQGDQ 239 Query: 236 EWYNIVSWTHYAMVTAEELG-ITQKNINQVSKDTTNPD 272 W N ++ + + + + + QK + NP Sbjct: 240 VWLNYLNEFLFEINASGQNATLYQKWFGSKPRYPLNPQ 277 >gi|227329360|ref|ZP_03833384.1| putative amino acid ABC transporter, substrate binding protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 253 Score = 169 bits (428), Expect = 7e-40, Method: Composition-based stats. Identities = 46/233 (19%), Positives = 90/233 (38%), Gaps = 10/233 (4%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 + +L + S A L DI+KRG L+ + F V + +G+D+D R L+ Sbjct: 1 MGAAMLLVQAGSAMADQLQDIEKRGVLRVAVPQDFPPFGSVGTDLQPQGYDIDIARYLAK 60 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 + K+Q +P+ + R LQ+ ++D++ + RE + + +F G Sbjct: 61 EM---KLKLQLVPVTSANRVPYLQTNKVDLVISSLGKNAEREKVIDFSRAYAPFF--LGV 115 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 K ++S L G SI V G ++ L D +E +AY + Sbjct: 116 FGPKDSTLTSSDALEGKSIGVTRGAVEDMVLTDIAPKAA---QIKRYEDNNTTLSAYLSG 172 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + + + A+ P++ + ++ SP + + + V Sbjct: 173 QVEYVATGNLVVAAIA--EQNPTKAPVAKFMLKDSPCYIGLKKDEPALKAKVD 223 >gi|4154051|emb|CAA22704.1| putative glutamine-binding protein [Mycobacterium leprae] Length = 325 Score = 169 bits (428), Expect = 7e-40, Method: Composition-based stats. Identities = 55/258 (21%), Positives = 104/258 (40%), Gaps = 12/258 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDD 74 F T +A++ +I+ RG L G+ G F+ G+ GFD+D ++ IF Sbjct: 72 FPTKAEADAAV-AEIRARGRLIVGLEIGSNLFSFRDPITGEITGFDIDIAGEVARDIFGT 130 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 PS ++Y L+ R ALQ ++DI+ + T R + + Q + + Sbjct: 131 PSHMEYRILSTAARITALQKSEVDIIVKTMTITCKRRKLVNF--STVYLDAKQRILAPRD 188 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I+ S LS +C+ GTT+ +++ + E + A + DA Sbjct: 189 SPITKPSDLSNKRVCMTRGTTSLHQVSEVVP----PPIIVSAENWADCLVAMQQREIDAI 244 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE- 253 + D + L L + P H++ P++ ++ P I +T V+ T + Sbjct: 245 STDDAILAGL--VEEDPYLHIVGPNMATQ-PYGIGINLNNTTLVRFVNGTLERIRRDGTW 301 Query: 254 LGITQKNINQVSKDTTNP 271 + + +K + + P Sbjct: 302 ITLYRKWLTVLGPAPAPP 319 >gi|15827074|ref|NP_301337.1| putative glutamine-binding protein [Mycobacterium leprae TN] gi|221229552|ref|YP_002502968.1| putative glutamine-binding protein [Mycobacterium leprae Br4923] gi|13092622|emb|CAC29811.1| putative glutamine-binding protein [Mycobacterium leprae] gi|219932659|emb|CAR70396.1| putative glutamine-binding protein [Mycobacterium leprae Br4923] Length = 326 Score = 169 bits (428), Expect = 7e-40, Method: Composition-based stats. Identities = 55/258 (21%), Positives = 104/258 (40%), Gaps = 12/258 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDD 74 F T +A++ +I+ RG L G+ G F+ G+ GFD+D ++ IF Sbjct: 73 FPTKAEADAAV-AEIRARGRLIVGLEIGSNLFSFRDPITGEITGFDIDIAGEVARDIFGT 131 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 PS ++Y L+ R ALQ ++DI+ + T R + + Q + + Sbjct: 132 PSHMEYRILSTAARITALQKSEVDIIVKTMTITCKRRKLVNF--STVYLDAKQRILAPRD 189 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I+ S LS +C+ GTT+ +++ + E + A + DA Sbjct: 190 SPITKPSDLSNKRVCMTRGTTSLHQVSEVVP----PPIIVSAENWADCLVAMQQREIDAI 245 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE- 253 + D + L L + P H++ P++ ++ P I +T V+ T + Sbjct: 246 STDDAILAGL--VEEDPYLHIVGPNMATQ-PYGIGINLNNTTLVRFVNGTLERIRRDGTW 302 Query: 254 LGITQKNINQVSKDTTNP 271 + + +K + + P Sbjct: 303 ITLYRKWLTVLGPAPAPP 320 >gi|308513289|ref|NP_951857.2| amino acid ABC transporter periplasmic amino acid-binding protein [Geobacter sulfurreducens PCA] gi|41152668|gb|AAR34130.2| amino acid ABC transporter, periplasmic amino acid-binding protein [Geobacter sulfurreducens PCA] gi|298504920|gb|ADI83643.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Geobacter sulfurreducens KN400] Length = 263 Score = 169 bits (428), Expect = 7e-40, Method: Composition-based stats. Identities = 58/272 (21%), Positives = 95/272 (34%), Gaps = 13/272 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + L++ F + +K G L G++ A+G GFD Sbjct: 1 MKKLVLLMVSALLVAFAATAFAADGSWNRVKSAGKLVIGLDDAFPPMGYRDASGKLIGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + KI++ P +L SK+ D + T R + +AF Sbjct: 61 IDAAEEVGKRLG---IKIEWQPTAWDGVIHSLNSKKFDAIWNGMTITDER--AKQVAFTK 115 Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 DGQ ++ +K ++ L I Q G++ + A +E Sbjct: 116 PYIMDGQIAVVKFSEKRFKKIADLKNVKIGAQKGSSALNAVKKLPTA---PAELKEYEDN 172 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + A R D D + RP + ++P ISK P A + D E Sbjct: 173 PKALLDLEAGRIDVVVIDN--VTGRDFIAKRPGQFKVVPGFISKEPFGVAFRKEDKELRE 230 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 V T MV L + ++D TNP Sbjct: 231 KVQKTLDKMVKDGSLAKISR--KWFAEDITNP 260 >gi|228477470|ref|ZP_04062106.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus salivarius SK126] gi|228250905|gb|EEK10093.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus salivarius SK126] Length = 224 Score = 168 bits (427), Expect = 7e-40, Method: Composition-based stats. Identities = 47/215 (21%), Positives = 97/215 (45%), Gaps = 16/215 (7%) Query: 1 MYKDFFVSILCLIILFF----TSFSTNASIL------GDIKKRGFLKCGINTGLVGFAEV 50 + + +S++ + + +S + +S L I K+G L G+ + F Sbjct: 6 LSRILAISVIAFLAVLLWNTKSSQADESSKLLNSAAIQKIVKKGTLNVGVKQDVPNFGYY 65 Query: 51 KANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 A + ++G ++D + ++ + K+ + + + R + + ID+L T Sbjct: 66 SAKTNTYQGMEIDLAKKIAKEL---KVKVNFTAVTPQTREALMDNGTIDMLIATYTITDE 122 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 R+ S A Y+D GF++ K G +S L+G +I V G++ + + +Y A+N+ Sbjct: 123 RKAS--YAMSTPYYYDQIGFLVQTKSGYKKLSDLNGKTIGVSQGSSAKAAVEEYASANNL 180 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 K++ + E+ + A+R DA+ GD S L Sbjct: 181 KFNYVQLGSYPELAVSLYAYRIDAFAGDKSILSGY 215 >gi|315181506|gb|ADT88419.1| ABC glutamine transporter extracellular solute-binding protein, family 3 [Vibrio furnissii NCTC 11218] Length = 263 Score = 168 bits (427), Expect = 8e-40, Method: Composition-based stats. Identities = 46/260 (17%), Positives = 97/260 (37%), Gaps = 15/260 (5%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 S+L L F + + A L ++++G LK + F V + G+D+D Sbjct: 7 MSSVLMSASLLFGATTAQADQLESVQQKGVLKVAVPQDFPPFGSVGTDLKPHGYDIDMAG 66 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 L+ + K++ +P+ + R LQ+ ++D++ + RE + + ++ Sbjct: 67 YLAKKL---DVKLELVPVTSANRIPYLQTGKVDLVISSMGKNAEREKVIDFSAAYAPFY- 122 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 G + ++S LSG +I V G+ +L L+ + FE ++ Sbjct: 123 -LGVFGSSDEAVTSAQDLSGKTIGVTRGSVEDLELSKIAPS---DATIKRFEDNNATLSS 178 Query: 186 YRAHRCDAYTGDISAL--YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 + + + + A + P +L SP +++G+ V+ Sbjct: 179 FLSGQVSLIATGNLVVTEIATRYPAKAPQTKFLLK----NSPCYVGVMKGEDALLKEVNR 234 Query: 244 THY-AMVTAEELGITQKNIN 262 A G +QK + Sbjct: 235 LITEAKQDGVLEGFSQKWLK 254 >gi|302540998|ref|ZP_07293340.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Streptomyces hygroscopicus ATCC 53653] gi|302458616|gb|EFL21709.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Streptomyces himastatinicus ATCC 53653] Length = 274 Score = 168 bits (427), Expect = 8e-40, Method: Composition-based stats. Identities = 47/235 (20%), Positives = 89/235 (37%), Gaps = 11/235 (4%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 + S L + + G L+ F +GFDVD +A++ A+ K+ Sbjct: 35 ASRAQDSTLQKVTRSGTLRVASCLTFPPFGSTDKANKPQGFDVDVAKAMAKALG---VKV 91 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + + + R L++ ++D + N T R + +AF G+ ++ K I+ Sbjct: 92 KIVDTTSANRIPNLRTHKVDAVVCNFTTTAER--AKQVAFSDPYIVAGEVLMVKKSSAIA 149 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 S+ LSG + V G+T + + N K ++ A + + DA D Sbjct: 150 SLKDLSGKKVAVTKGSTNGAAVKE----GNPKARIQEYDTSAAAVLAVKQGQADAMVEDS 205 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 + L PS V ++ A + QGD +W ++ T+ + Sbjct: 206 NFLNYQAKL--DPSLKVTKDSVVPLEYNAIGVGQGDPDWLQWINTWLREFNTSGQ 258 >gi|66043568|ref|YP_233409.1| extracellular solute-binding protein [Pseudomonas syringae pv. syringae B728a] gi|63254275|gb|AAY35371.1| extracellular solute-binding protein, family 3 [Pseudomonas syringae pv. syringae B728a] Length = 261 Score = 168 bits (427), Expect = 8e-40, Method: Composition-based stats. Identities = 52/274 (18%), Positives = 101/274 (36%), Gaps = 14/274 (5%) Query: 1 MYKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + + L L + +A+ L D+ RG LK + F V + +G Sbjct: 1 MTKRYSALLTALFASLMLSQTPAHANGLDDVVARGTLKVAVPQDFPPFGSVGPDMKPRGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D + L+ + K++ P+N+ R L + ++D++ + RE + + Sbjct: 61 DIDTAQLLADKL---KVKLELTPVNSTNRIPFLTTGKVDLVISSLGKNPDREKVIDFSRA 117 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 ++ + ++ L G +I V G ++ L++ FE Sbjct: 118 YAPFY--LAVFGPPDSPVKDIADLKGKTISVTRGAIEDIELSNVAPE---GATIKRFEDN 172 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AAY A + D + A+ + P + + SP+ + +G E Sbjct: 173 NSTIAAYLAGQTDLIASGNVVMVAI--SERNPKRIPAMKVKLKDSPVYVGVNKGQPELLG 230 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 V+ A A+ G +K + KD D+ Sbjct: 231 KVNEILNA---AKADGTLEKASQKWLKDPLPADL 261 >gi|260102751|ref|ZP_05752988.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus helveticus DSM 20075] gi|260083444|gb|EEW67564.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus helveticus DSM 20075] Length = 272 Score = 168 bits (427), Expect = 8e-40, Method: Composition-based stats. Identities = 41/265 (15%), Positives = 95/265 (35%), Gaps = 13/265 (4%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIF 72 L N ++ +K+ + G+ F G +GF++D AL+ + Sbjct: 19 ALTACGKRNNQNVYQKVKESKHIIWGVRADTRLFGLTNVKTGKIEGFEIDLAHALTKQML 78 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 + ++ A R L++ ID + T R + + G ++ Sbjct: 79 GKDATASFVTTTANTRIPLLKNGNIDAVLATMTITPERAKQVDF--SKPYFPAGSSLLVP 136 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 I +V L+G ++ GTT + + + ++ + +A +A++ Sbjct: 137 DNSKIKNVKDLNGETVLAVKGTTAVNDVHKFEPKA----RVLQYDDYGQAMSALKANQGV 192 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 A T D L + N + ++ + + +P A+ +G ++V + A+ + Sbjct: 193 ALTTDNGLLAGIAQENPG---YKLVGGVYNNAPYGIAVNKGQ---KDMVDHINKALDQLK 246 Query: 253 ELGITQKNINQVSKDTTNPDVQRFL 277 + G + I + ++ L Sbjct: 247 KNGTYDRLIKKWFAGIPGFSLKGVL 271 >gi|312862681|ref|ZP_07722921.1| putative major cell-binding factor [Streptococcus vestibularis F0396] gi|311101541|gb|EFQ59744.1| putative major cell-binding factor [Streptococcus vestibularis F0396] Length = 277 Score = 168 bits (427), Expect = 9e-40, Method: Composition-based stats. Identities = 55/283 (19%), Positives = 113/283 (39%), Gaps = 24/283 (8%) Query: 1 MYKDFFVSILCLIILFF----TSFSTNASIL------GDIKKRGFLKCGINTGLVGFAEV 50 + + +S++ + + +S + +S L I K+G L G+ + F Sbjct: 6 LSRILAISVIAFVAVLLWNTKSSQADESSKLLNSAAIQKIVKKGTLNVGVKQDVPNFGYY 65 Query: 51 KANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 A + ++G ++D K+ + + + R + + ID+L T Sbjct: 66 SAKTNTYQGMEID---LAKKIAKKLKVKVNFTAVTPQTREALMDNGTIDMLIATYTITDE 122 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 R+ S A Y+D GF++ K G +S L+G +I V G++ + + +Y A+N+ Sbjct: 123 RKAS--YAMSNPYYYDQIGFLVQTKSGYKKLSDLNGKTIGVSQGSSAKTAVEEYASANNL 180 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 K+ + E+ + A+R DA+ GD S L + IL + A Sbjct: 181 KFDYVQLGSYPELAVSLYAYRIDAFAGDKSILSGY-----ESDKTKILDEGFKTQEYGIA 235 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272 + + E + +T+ + ++ G QK ++ + Sbjct: 236 SSKSNQEL---IDYTNNLIAKWQKDGSLQKLYDKYHLKPAKAE 275 >gi|119383821|ref|YP_914877.1| extracellular solute-binding protein [Paracoccus denitrificans PD1222] gi|119373588|gb|ABL69181.1| L-glutamate-binding protein / L-aspartate-binding protein [Paracoccus denitrificans PD1222] Length = 295 Score = 168 bits (427), Expect = 9e-40, Method: Composition-based stats. Identities = 42/249 (16%), Positives = 86/249 (34%), Gaps = 9/249 (3%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPSKIQYLP 82 L I + G + F+ + A+ GF +D C + +I ++ Y+P Sbjct: 28 TLERIASNEAITIGYREASIPFSYLGADQQPIGFSLDLCARIVDSIEAKLGKEIRVNYVP 87 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 +N+ R +Q+ +DI T R+ + + T+ +++ + + Sbjct: 88 VNSSNRIPLIQNGTVDIECGGTANNKTRQEQVSFSVA--TFVSQPRWLVLARNDLKGADD 145 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G ++ G+ + A A M + + E + R A+ D L Sbjct: 146 LKGKTVVATQGS-NAVGFAQALSAQGMDLNIAQAKDHAESFLMLTSGRAVAFMEDDILLA 204 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 L+ P+ LP+ + + D E+ +V T ++ + E + Sbjct: 205 GLRAAAPDPAALAFLPEAYDRIYYGLMFTKDDAEFKAVVDDTLKGLMASGE---FTAIYD 261 Query: 263 QVSKDTTNP 271 Q P Sbjct: 262 QWFTQPIPP 270 >gi|88855455|ref|ZP_01130119.1| putative glutamate transporter glutamate-binding protein [marine actinobacterium PHSC20C1] gi|88815362|gb|EAR25220.1| putative glutamate transporter glutamate-binding protein [marine actinobacterium PHSC20C1] Length = 289 Score = 168 bits (427), Expect = 9e-40, Method: Composition-based stats. Identities = 49/295 (16%), Positives = 107/295 (36%), Gaps = 29/295 (9%) Query: 1 MYKDFFVSILCLI-ILFFTSFST---------------NASILGDIKKRGFLKCGINTGL 44 + K +S + + IL ++ + + + + G + G Sbjct: 3 LKKGLMISAIAAVGILGLSACAADTGTTNPDVVVPEFEAGTTMASLADAGKITIGTKFDQ 62 Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 F +G+ GFDV+ + +++++ I+++ + R +++ +DI+ Sbjct: 63 PLFGLKGPSGEPVGFDVEMGKIIAASLGISEDNIEWVETVSANRETFIENGTVDIVIATY 122 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLAD 162 R+ + A Y GQ ++ + +GI+ L+G +C AG+T+E +A+ Sbjct: 123 TINDKRKEVISFA--GPYYNAGQDILVLEGNPEGITGPEDLAGKDVCSVAGSTSEKNIAE 180 Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222 Y + I + R+ A T D L L + E +L + + Sbjct: 181 Y------GVNLITTDTYSNCLEPLRSGTVVAVTTDNVILAGLA--DQNAGEFEVLSNPFT 232 Query: 223 KSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT-QKNINQVSKDTTNPDVQRF 276 + P + D + + ++ + +V K T P V R+ Sbjct: 233 EEPYGIGLGHDDDAFRDYINDVLEGSYDDGSWDSAWEATAGKVLKLPTPPAVDRY 287 >gi|225386719|ref|ZP_03756483.1| hypothetical protein CLOSTASPAR_00467 [Clostridium asparagiforme DSM 15981] gi|225047197|gb|EEG57443.1| hypothetical protein CLOSTASPAR_00467 [Clostridium asparagiforme DSM 15981] Length = 306 Score = 168 bits (427), Expect = 9e-40, Method: Composition-based stats. Identities = 48/244 (19%), Positives = 99/244 (40%), Gaps = 17/244 (6%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFD---DPSK----I 78 + I G LK G+ T + F+ + A G+++G + D ++ IF D +K + Sbjct: 66 VQKIIDAGVLKVGVKTDVPCFSLLNTATGEYEGLEDDLAYNIAGKIFGCTPDEAKEKKLV 125 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 ++ + AK R +++ ++D++ T R+ + + D G ++ K GI+ Sbjct: 126 EFQGVTAKTRGPLVENGELDMVIATFTITEERKETYNF--STPYFTDAVGLLVLKDSGIN 183 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP--IVFERVEEIDAAYRAHRCDAYTG 196 S+ L G I V G+T++ Y + P F+ + AA A D ++ Sbjct: 184 SIEDLDGKVIGVAQGSTSQKGFEAYVAEKGINVKPTFEEFDGYPALAAALSAKNIDVFSV 243 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 D + L + + +L D ++ + +T +V + + +L Sbjct: 244 DRAILAGYR-----DDTNKLLDDRYAEQEYGVCTKKENTGLAELVDGVVTDLKDSGKLAE 298 Query: 257 TQKN 260 K+ Sbjct: 299 MIKD 302 >gi|222086403|ref|YP_002544937.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221723851|gb|ACM27007.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 264 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 47/266 (17%), Positives = 94/266 (35%), Gaps = 15/266 (5%) Query: 1 MYKDFFVSILCLIILFFTSF----STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M + ++ L + +L S + A L DI RG ++ + F V + Sbjct: 1 MKRRQLLTALGMAMLAMGSLSSPHAARADALSDITSRGTIRVAVPQDFPPFGSVGPDMAP 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G+D+D + + K + +P+ + R LQ+ ++D++ + R+ + Sbjct: 61 MGYDIDMANLIGEKLG---VKTELVPVTSANRIPYLQTNKVDLVISSLGKNAERQAVIDF 117 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 +F+G + LSG +I V G +L L + Sbjct: 118 TDAYAPFFNG--VFGPADVAATKPEDLSGKTIGVTRGAIEDLALTKVAPQ---DATIKRY 172 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E +A+ + + D A+ P + + +I+ SP + + + Sbjct: 173 EDNNGTISAFLSGQVDLVATGNVVAAAILA--KNPPKKPEMKFLITNSPCFIGLNKSEPA 230 Query: 237 WYNIVSWTHYAMVTAEELG-ITQKNI 261 V+ A LG I+QK + Sbjct: 231 LQKKVNDIIAAAKADGTLGKISQKWL 256 >gi|312127064|ref|YP_003991938.1| extracellular solute-binding protein family 3 [Caldicellulosiruptor hydrothermalis 108] gi|311777083|gb|ADQ06569.1| extracellular solute-binding protein family 3 [Caldicellulosiruptor hydrothermalis 108] Length = 266 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 60/273 (21%), Positives = 101/273 (36%), Gaps = 17/273 (6%) Query: 1 MYKDF--FVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 MYK V ++ L I F + S+N + L IKK G++ N + Sbjct: 1 MYKKAIALVLLIALFIPFLSGCSSNEKNMTTLEKIKKTKEFVVGMDNTFPPMEFTDDNNN 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFDVD ++ + +K++ + ++ AL+SK+ D + T R+ + Sbjct: 61 TVGFDVDLANEIAKKLG---AKLKIVAVDWSGIQSALKSKKFDAIISCFSITDERKKA-- 115 Query: 116 LAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + Q + K I S L G I VQA TT + + K N + Sbjct: 116 FNLAGPYLYIRQVIAVKKGDNSIKSFEDLKGIKIGVQANTTGDSAVQK-MKFINYEKDVT 174 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +ER+ + R A D Y K P + I P + + P+ A+ + D Sbjct: 175 RYERITDAFNDLDIGRIKAVVIDSVVAYYYKKQ--NPEKFDIAPAQLEREPVGIALRKED 232 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 + YN + E+ G K + + Sbjct: 233 KDLYNEIQKILD---QLEKDGTIAKISEKWFGE 262 >gi|152994486|ref|YP_001339321.1| extracellular solute-binding protein [Marinomonas sp. MWYL1] gi|150835410|gb|ABR69386.1| extracellular solute-binding protein family 3 [Marinomonas sp. MWYL1] Length = 263 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 101/259 (38%), Gaps = 11/259 (4%) Query: 1 MYKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M + + +I F++ S +A +L DIK R ++ + F V + +G Sbjct: 1 MKRLTKLLGKTLIIAAGFSALSASADVLQDIKDRNLIRIAVPQDFPPFGSVGTDLKPQGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD ++ + KI+ +P+ + R LQ++++D++ + RE ++ + Sbjct: 61 DVDMANYIAKEMG---VKIEIIPVTSANRIPYLQTQKVDLVISSLGKNPEREKAIDFSTP 117 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +F G K ++ + +L+ ++ V G+ +L L + FE Sbjct: 118 YAPFF--LGVFGSKDVAVTKIGELADKTVGVTRGSVEDLELEKNAPK---SVNVRRFEDN 172 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AY + + + L A ++ +P ++ SP + +G+ Sbjct: 173 NTTLTAYLSGQVNLIATGN--LVAAEIAKRQPQRAPENKFMLKDSPCYIGMAKGEVALQA 230 Query: 240 IVSWTHYAMVTAEELGITQ 258 V+ + + + EL Sbjct: 231 KVNELIKSALASGELNEIS 249 >gi|224371640|ref|YP_002605804.1| putative ABC-type amino acid transport-system, periplasmatic component [Desulfobacterium autotrophicum HRM2] gi|223694357|gb|ACN17640.1| putative ABC-type amino acid transport-system, periplasmatic component [Desulfobacterium autotrophicum HRM2] Length = 299 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 50/266 (18%), Positives = 109/266 (40%), Gaps = 13/266 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWK 57 M K L L +L + S I+ I++ G ++ G + FA + +G+ Sbjct: 1 MIKKIINIGLTLFLLIICGAAPGGSDEIMDRIERTGIIRIGFRQDAIPFAYLDPVSGEHI 60 Query: 58 GFDVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 GF VD L+ + F +IQ + +N + R + +ID+ ++ + L RE ++ Sbjct: 61 GFSVDMAGLLAENLSKHFRKKIRIQPVVINTENRIPLIVKHEIDVEMGSSTYNLEREQTV 120 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK-AHNMKYHP 173 + + F++ + I ++ ++G ++ AGTT L + + Sbjct: 121 DFSLM--FFISETTFMVRSQSAIRTMDDINGKTVGAAAGTTNLSALQSMVQIKRLKSVNI 178 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + + + + + DA D + L +++ + P+ IL IS P A + + Sbjct: 179 KIIKTISQGFTDLKKGVIDALCLDRTLLNVMRIKDSDPNALTILNFAISYEPYAYIVPEN 238 Query: 234 DTEWYNIVS----WTHYAMVTAEELG 255 ++++ + ++ W+ E G Sbjct: 239 NSDFRDFLNNTIRWSLNTNRFYEIYG 264 >gi|330466435|ref|YP_004404178.1| extracellular solute-binding protein family 3 [Verrucosispora maris AB-18-032] gi|328809406|gb|AEB43578.1| extracellular solute-binding protein family 3 [Verrucosispora maris AB-18-032] Length = 282 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 40/255 (15%), Positives = 89/255 (34%), Gaps = 10/255 (3%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 S + I+G + + L G+ G ++ ++GFD++ + ++ + D Sbjct: 24 AGSGTGATGIVGKAESQKKLVIGVKADQPGLG-LQTGSQYEGFDIEIGKIIAKGLGVDAG 82 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 I++ + R ++ +D++ R+ + A Y GQ ++ Sbjct: 83 NIEWKTTVSANREPFIEQGTVDLVVATYTINDERKQKINFA--GPYYIAGQDLLVKSDST 140 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 I+ QL+G ++C +G+T + + + F+ + + DA T Sbjct: 141 ITGPDQLAGKTVCSVSGSTPAKRIQENYPDA----RLQQFDSYSKCLPLLDGGQVDAVTT 196 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 D L + + ++ S P + + DT V+ A A G Sbjct: 197 DDIILAGYAAQDQYAGKFKVVGSTFSDEPYGIGLKKDDTTGCEKVNEILKA---AAADGS 253 Query: 257 TQKNINQVSKDTTNP 271 + + + P Sbjct: 254 YKAAWDTTLGKSGTP 268 >gi|260770435|ref|ZP_05879368.1| ABC glutamine transporter extracellular solute-binding protein family 3 [Vibrio furnissii CIP 102972] gi|260615773|gb|EEX40959.1| ABC glutamine transporter extracellular solute-binding protein family 3 [Vibrio furnissii CIP 102972] Length = 263 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 46/260 (17%), Positives = 97/260 (37%), Gaps = 15/260 (5%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 S+L L F + + A L ++++G LK + F V + G+D+D Sbjct: 7 MSSVLMSASLLFGATTAQADQLESVQQKGVLKVAVPQDFPPFGSVGTDLKPHGYDIDMAG 66 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 L+ + K++ +P+ + R LQ+ ++D++ + RE + + ++ Sbjct: 67 YLAQKL---DVKLELVPVTSANRIPYLQTGKVDLVISSMGKNAEREKVIDFSAAYAPFY- 122 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 G + ++S LSG +I V G+ +L L+ + FE ++ Sbjct: 123 -LGVFGSSDEAVTSAQDLSGKTIGVTRGSVEDLELSKIAPS---DATIKRFEDNNATLSS 178 Query: 186 YRAHRCDAYTGDISAL--YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 + + + + A + P +L SP +++G+ V+ Sbjct: 179 FLSGQVSLIATGNLVVTEIATRYPAKAPQTKFLLK----NSPCYVGVMKGEDALLKEVNR 234 Query: 244 THY-AMVTAEELGITQKNIN 262 A G +QK + Sbjct: 235 LITEAKQDGVLEGFSQKWLK 254 >gi|58336906|ref|YP_193491.1| glutamine-binding protein precursor [Lactobacillus acidophilus NCFM] gi|227903464|ref|ZP_04021269.1| ABC superfamily ATP binding cassette transporter, glutamine-binding protein [Lactobacillus acidophilus ATCC 4796] gi|58254223|gb|AAV42460.1| glutamine-binding protein precursor [Lactobacillus acidophilus NCFM] gi|227868784|gb|EEJ76205.1| ABC superfamily ATP binding cassette transporter, glutamine-binding protein [Lactobacillus acidophilus ATCC 4796] Length = 272 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 45/263 (17%), Positives = 93/263 (35%), Gaps = 13/263 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDD 74 ++ ++ +K + G+ F G +GF++D RAL+ + Sbjct: 21 SACGNKSSQNVYRKVKADKQIVWGVRADTRLFGLTNVKTGKIEGFEIDLARALTKQMLGK 80 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 +K ++ A R L++ ID + T R + + G ++ Sbjct: 81 NAKADFVTTTANTRIPLLKNGNIDAVLATMTITPERAKQVTF--SKPYFPAGSSLLVPND 138 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I SV L+ ++ GTT D K + F+ + +A +A++ A Sbjct: 139 SKIKSVKDLNNKTVLAVKGTTAV----DDVHKSAPKARVLQFDDYGQAMSALKANQGVAL 194 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 T D L + N + ++ + S +P A+ +G + + + A+ E Sbjct: 195 TTDNGLLAGIAQENPG---YKLVGGVYSDAPYGIAVNKGQKDMADHID---KALDELEAN 248 Query: 255 GITQKNINQVSKDTTNPDVQRFL 277 G + I + ++ L Sbjct: 249 GTYNRLIRKWFAGIPGFSLKGVL 271 >gi|254470766|ref|ZP_05084169.1| extracellular solute-binding protein, family 3 [Pseudovibrio sp. JE062] gi|211959908|gb|EEA95105.1| extracellular solute-binding protein, family 3 [Pseudovibrio sp. JE062] Length = 275 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 51/276 (18%), Positives = 112/276 (40%), Gaps = 11/276 (3%) Query: 1 MYKDFF--VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K +++ ++ ++ A + DI +G L+CG+ ++ + G Sbjct: 1 MKKLIRNSFALVGAALMAASTAPAQADEIDDIIGKGTLRCGVMLDFPPAGFRNSSNEPDG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDV +C+ ++ A+ + + + + ER AL SK++D++ + TL R ++ Sbjct: 61 FDVQYCKDMAKALGVEA---EVVETPSPERVPALVSKRVDVMIASASNTLERAKTVAFTM 117 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY-HPIVFE 177 + Y + I K I S L G S+ GTT E ++F+ + + F Sbjct: 118 PYVVYTNV--VITQKDSDIESFEDLKGRSVGNVVGTTPEQFFLEHFEKWDDSNGNYTGFG 175 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E A + +A G + L + + P+ + + ++ A+ + D Sbjct: 176 SDAESYLAVSQGKVEAIIGSSAQAADLIASGNFPNLEIRAEAPFTVDLVSIAVNKDD--- 232 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 ++++ W + + ++ G + Q + P + Sbjct: 233 HSLLRWANLFVWEQQKSGRYAELYKQYFRSDEVPAL 268 >gi|293602700|ref|ZP_06685141.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] gi|292818891|gb|EFF77931.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] Length = 329 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 48/266 (18%), Positives = 94/266 (35%), Gaps = 11/266 (4%) Query: 12 LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI 71 ++ T+ + S L I++ G + G V FA + N G+ V+ C+ ++ I Sbjct: 39 MLGSAATAHAEGPSRLDKIRETGVITIGHPETSVPFAYLDGNQKPIGYTVEICQEVAQHI 98 Query: 72 FD----DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 +++Y P + R L + ID+ NT L + ++F P T+ Sbjct: 99 KAALKLPKLEVRYNPTTSATRIPLLANGTIDLECGNTTNNL--DRHKLVSFAPTTFVAQV 156 Query: 128 GFIMHKKKGI--SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 + K G+ +++ G +I QAG T ++ N+ + E Sbjct: 157 VLVARKDGGVDPNNLESFRGKTIAAQAGGQTFRLISGLNAKGNLGITMAPTKDTAETILM 216 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + R D Y ++ P VI + +P + D + +V Sbjct: 217 VESGRAAGSANDDGIAYGAVASSKNPDAFVIGKKGLEMAPYGIMEPKDDPAFKKVVD--- 273 Query: 246 YAMVTAEELGITQKNINQVSKDTTNP 271 A++ + G ++ P Sbjct: 274 EAVIDLIKTGKVAAIYDKYFNSPIPP 299 >gi|302525507|ref|ZP_07277849.1| glutamate binding periplasmic protein [Streptomyces sp. AA4] gi|302434402|gb|EFL06218.1| glutamate binding periplasmic protein [Streptomyces sp. AA4] Length = 301 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 46/255 (18%), Positives = 93/255 (36%), Gaps = 17/255 (6%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 IK G + G+ + G ++GFD++ R +++ + KI+Y +++ Sbjct: 58 AKIKSAGTITIGVKDDQPELGQKDPKTGKFQGFDIEIARMVAAGLGISEDKIKYTTVDSG 117 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSG 145 R A+ + Q+D+ R+ + A + GQ ++ K I+ L G Sbjct: 118 AREQAISNGQVDLYVGTYTINDKRKKLVSFA--GPYFQAGQDLLVRKDDTSITGPETLKG 175 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 +C G+T + + + + F++ + DA T D + L Sbjct: 176 KKVCSVTGSTPIQRVRE----QKLTDQIVEFQKYSQCVEKLTTKDVDAVTTDDAILKGYA 231 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 P ++ SK P + + D + + A AE G +K + Sbjct: 232 AQ--DPDSFKVVGKPFSKEPYGIGLNKDDKVLRDKIDDLLQA---AETNGTWKKIYDATL 286 Query: 266 KDT----TNPDVQRF 276 + T P ++R+ Sbjct: 287 GKSGAPATPPAIERY 301 >gi|257461099|ref|ZP_05626197.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] gi|257441473|gb|EEV16618.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] Length = 269 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 52/266 (19%), Positives = 111/266 (41%), Gaps = 18/266 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K IL L++ S + A L +IK G L+ G+ F+++ +G +GF+ Sbjct: 1 MKK----FILSLLVAALASSALCARSLSEIKSSGVLRIGVYDAQPPFSKI-EDGVHQGFE 55 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD ++ + K+++ + A +R LQ ++D + T RE + Sbjct: 56 VDMANTIAKDMLPSGGKVEFTSVLANQRIKFLQEDKVDAVIATLTVTPEREKQIDF--TT 113 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + G + + I S+++L +I V +G T E YF+ Y+ + Sbjct: 114 PYFSVNIGILTRVEDKIKSLNELQDKTILVLSGGTAET----YFEKQG--YNIARCDNAN 167 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A +A + D Y D + A + + + V + ++ + LA + +G++E + Sbjct: 168 ACYKALKAGQGDGYADDNLVVLAYPVLDKKVE--VNIKNLGTSDFLAIGVKKGNSELLDF 225 Query: 241 VSWTHYAMVTAEELGITQKNINQVSK 266 ++ ++ + G + + + + Sbjct: 226 LNG---ELIKLSKEGFFKNSFDNFIE 248 >gi|257461102|ref|ZP_05626200.1| polar amino acid ABC uptake transporter substrate binding protein [Campylobacter gracilis RM3268] gi|257441476|gb|EEV16621.1| polar amino acid ABC uptake transporter substrate binding protein [Campylobacter gracilis RM3268] Length = 267 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 60/264 (22%), Positives = 104/264 (39%), Gaps = 22/264 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L L A+ L DIK+ G ++ G+ F+ NG KGF+ Sbjct: 1 MKKILLSILLGAGALC-------ANSLADIKQAGEIRIGLQDSQPPFSF-DDNGTLKGFE 52 Query: 61 VDFCRALSSAIFD-DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 VD L +F KI ++ + +K+R +L+ ++D++ T R + Sbjct: 53 VDLANELVKNLFGNKKIKIDFISVASKDRVPSLEQNKVDLIISKLTVTKDRVQKVDF--S 110 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G + K IS + Q++ I GTT E ++FK N Y Sbjct: 111 YPYYSVQIGVLSRKDDNISRIDQIAHKKILSVKGTTAE----EHFK--NAGYEIATCADA 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A +A + D + + ND + I+ ++ +A A+ +G+TE + Sbjct: 165 NECVARLKAGEGIGFADDNTVVLGY-ARNDAALDAKII-NLGKVDYIAVALSKGNTELLD 222 Query: 240 IVSWTHYAMVTAEELGITQKNINQ 263 V+ + M A K ++ Sbjct: 223 AVNSSLVKMYKA---KFFHKAFDE 243 >gi|312792974|ref|YP_004025897.1| extracellular solute-binding protein family 3 [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180114|gb|ADQ40284.1| extracellular solute-binding protein family 3 [Caldicellulosiruptor kristjanssonii 177R1B] Length = 266 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 65/290 (22%), Positives = 110/290 (37%), Gaps = 31/290 (10%) Query: 1 MYKDF--FVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 MYK V ++ L I F + S N + L IKK G++ N + Sbjct: 1 MYKKAIALVLLIALFIPFLSGCSLNNQNMTTLEKIKKTKEFVVGMDNTFPPMEFTDDNNN 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFDVD ++ + +K++ + ++ AL+SK+ D + T R+ + Sbjct: 61 TVGFDVDLANEIAKKLG---AKLKIVAVDWSGIQSALKSKKFDAIISCFSITDERKKA-- 115 Query: 116 LAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + Q + K I S L G I VQA TT + + K N + Sbjct: 116 FNLAGPYLYIRQVIAVKKGDSSIKSFEDLKGIKIGVQANTTGDSAVQK-MKFINYEKDVT 174 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +ER+ + R A D Y K P + I P + + P+ A+ + D Sbjct: 175 RYERITDAFNDLNIGRIKAVVIDSVVAYYYKKQ--NPEKFDIAPAQLEREPVGIALRKED 232 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV-QRFLGIDKSS 283 + YN + QK ++Q+ KD T + +++ G D + Sbjct: 233 KDLYNEI----------------QKILDQLKKDGTIAKISEKWFGEDITK 266 >gi|226359784|ref|YP_002777562.1| ABC transporter substrate-binding protein [Rhodococcus opacus B4] gi|226238269|dbj|BAH48617.1| putative ABC transporter substrate-binding protein [Rhodococcus opacus B4] Length = 340 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 47/246 (19%), Positives = 98/246 (39%), Gaps = 12/246 (4%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L +I RG L G++ F+ G +GFD+D + ++ IF DP+K+++ L + Sbjct: 95 LAEIASRGRLIVGVDQNTNPFSFRDPTTGTLQGFDIDVAKEITKDIFGDPAKVEFRLLTS 154 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 RF AL+ +D++ T T R +G + + Q ++ + I+ + L+G Sbjct: 155 AGRFSALEQNDVDVVVHATAITCERARRVGFSTE--YFRAFQRILVPRGSDITGPADLAG 212 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 +C TT+ T+ + ++ + + DA + + L L Sbjct: 213 KRVCTFVDTTSLPTVQRVAPEA----TIVAVPDWDDCLVTMQKRQADATSTSDALLAGL- 267 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 + P ++ P + + A+ + + V+ T M + G + ++ Sbjct: 268 -VSQDPHFQIVGPPMEGEEHWGLAVNKYKDDLIRFVNGTLDRMRS---DGTWMRLYDRWI 323 Query: 266 KDTTNP 271 + P Sbjct: 324 AGSLGP 329 >gi|322516686|ref|ZP_08069597.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus vestibularis ATCC 49124] gi|322124787|gb|EFX96220.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus vestibularis ATCC 49124] Length = 224 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 54/219 (24%), Positives = 99/219 (45%), Gaps = 16/219 (7%) Query: 3 KDFFVSILCLIILFFTSF----STNASIL------GDIKKRGFLKCGINTGLVGFAEVKA 52 + V+ L ++ +F S + + S L I KRG L G+ + F A Sbjct: 8 RYLTVACLAIVTIFLISSHKTKAEDTSKLLDSKAVQKIVKRGTLNVGVKQDVPNFGYYSA 67 Query: 53 NGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 + ++G +VD + ++ + K+ Y+P+ + R + + ID+L R+ Sbjct: 68 KTNSYEGMEVDLAKKIADEL---KVKVNYIPVTTQTREPLMDNGTIDLLIGTYTINDERK 124 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 S A Y D GF++ K I+ +S L+G +I V G +T+ L +Y AHN+K+ Sbjct: 125 AS--YAISDPYYHDQIGFLVLKNSDINKISDLNGKTIGVSQGASTKAALQEYASAHNLKF 182 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + + E+ + AHR +A++ D S L + + Sbjct: 183 NYVQLGSFPELAVSLYAHRVNAFSVDKSILSGYESKKTK 221 >gi|323698009|ref|ZP_08109921.1| extracellular solute-binding protein family 3 [Desulfovibrio sp. ND132] gi|323457941|gb|EGB13806.1| extracellular solute-binding protein family 3 [Desulfovibrio desulfuricans ND132] Length = 253 Score = 168 bits (425), Expect = 2e-39, Method: Composition-based stats. Identities = 49/263 (18%), Positives = 91/263 (34%), Gaps = 17/263 (6%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + + + + F +F+ + L IK +G + G + F + G+ GFDV Sbjct: 6 MRMLLMLAAIISLCAFATFAQAGTTLDKIKAKGVITVGNSPDYPPFESIGDGGERVGFDV 65 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D A+++ + K+Q++ ++ A QS Q+D+ T R + ++F Sbjct: 66 DLLNAIAAKMG---VKVQWVTMDFAAIVTATQSGQVDMGMSGFSVTPER--AGQVSFSAP 120 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + GQ ++ I S + L G I VQ GTT E A + E Sbjct: 121 YFASGQALVVRNDSDIKSAADLKGKKIAVQLGTTGEQEADKIEGA-----EVVKPESYNI 175 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 DA DIS + + ++ A +G+ + Sbjct: 176 AFMMLGNKVADAVVADISVADEFVKQ----GKFKRAGEPLTFEEFAMITRKGNDALLQAL 231 Query: 242 SWTHYAMVTAEELGITQKNINQV 264 + A+ G + + Sbjct: 232 NQGLEAVKA---DGTYAAIVKKW 251 >gi|227546749|ref|ZP_03976798.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Bifidobacterium longum subsp. infantis ATCC 55813] gi|227212711|gb|EEI80592.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Bifidobacterium longum subsp. infantis ATCC 55813] Length = 279 Score = 168 bits (425), Expect = 2e-39, Method: Composition-based stats. Identities = 50/272 (18%), Positives = 104/272 (38%), Gaps = 21/272 (7%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 ++ L + + + A + G ++ GI G K +G + GFDVD + Sbjct: 14 VIAALAAVACTMSLAACGAD------ETGKIRIGIKFDQPGLGF-KKSGTYVGFDVDVAK 66 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ + +I + +K+R +Q+ +D++ T R+ ++ A + Sbjct: 67 YIAKKLGYSEDQIIWKEAPSKQREAMIQNGDVDMILATYSITDERKKAVSFA--GPYFVA 124 Query: 126 GQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 GQ ++ K I+ L+G +C G+T+ T+ + F + + E Sbjct: 125 GQDLLVRKDDNSINGPEDLNGKRLCSVTGSTSAATVKEKFASE---VQLMEQPGYAECAT 181 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 A + DA T D L L + + ++ ++ I +GDT+ ++ Sbjct: 182 ALFSGIVDAVTTDDIILAGLASASR--GKLKVVGKPFTQEYYGVGIKKGDTQLATKINNA 239 Query: 245 HYAMVT--AEELGITQKNINQVSKDTTNPDVQ 274 M+ + E I+ + PDV+ Sbjct: 240 IVDMIQDGSWENAIS----DNTKGTNYTPDVR 267 >gi|289811796|ref|ZP_06542425.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 225 Score = 168 bits (425), Expect = 2e-39, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 75/212 (35%), Gaps = 11/212 (5%) Query: 3 KDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 + ++L + + + + S L I K G + G V F+ Sbjct: 16 RKLTTAMLVMGLSAGLAHAEDGAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVV 75 Query: 58 GFDVDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ D+ A+ + +K ++ +P+ ++ R LQ+ D +T L R+ Sbjct: 76 GYSQDYSNAIVEVVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQ 135 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + G + K I L G ++ V +GTT+E+ L + M Sbjct: 136 AAF--SDTIFVVGTRLLTKKGGDIKDFPDLKGKAVVVTSGTTSEILLHKLNEEQKMGMRI 193 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 I + + + R A+ D + L + Sbjct: 194 ISAKDHGDSFRTLESGRAVAFMMDDALLAGER 225 >gi|330957137|gb|EGH57397.1| extracellular solute-binding protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 261 Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 48/261 (18%), Positives = 93/261 (35%), Gaps = 11/261 (4%) Query: 1 MYKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + + L L + +A+ L D+ RG LK + F V + +G Sbjct: 1 MTKRYSALLTALFASLMLSQTPAHANGLDDVMARGTLKVAVPQDFPPFGSVGPDMKPRGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D + L+ + K++ P+N+ R L + ++D++ + RE + + Sbjct: 61 DIDTAQLLADKL---KVKLELTPVNSTNRIPFLTTGKVDLVISSLGKNPDREKVIDFSRA 117 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 ++ + ++ L G +I V G ++ L++ FE Sbjct: 118 YAPFY--LAVFGPPDSPVKDIADLKGKTISVTRGAIEDIELSNVAPE---GATIKRFEDN 172 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AAY A + D + A+ + P L + SP+ + +G E Sbjct: 173 NSTIAAYLAGQTDLIASGNVVMVAI--SERNPKRIPALKVKLKDSPVYVGVNKGQPELLG 230 Query: 240 IVSWTHYAMVTAEELGITQKN 260 V+ A L + Sbjct: 231 KVNEILNAAKADGSLEKASQT 251 >gi|291287601|ref|YP_003504417.1| extracellular solute-binding protein family 3 [Denitrovibrio acetiphilus DSM 12809] gi|290884761|gb|ADD68461.1| extracellular solute-binding protein family 3 [Denitrovibrio acetiphilus DSM 12809] Length = 269 Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 54/277 (19%), Positives = 109/277 (39%), Gaps = 23/277 (8%) Query: 2 YKDFFVSILCLIILFFTSFSTNAS-----ILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 K + + ++ + ++ + + L I K G K G++ G + F G+ Sbjct: 1 MKRVLLVLCLMLTMAVSAVAKDNDDQPVSALDSIVKSGVFKVGLDPGYMPFEMRDKKGEL 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFD+D + ++ ++ K++ + AL + + D++ T LR + + Sbjct: 61 IGFDIDLAKDMAKSMG---VKLEIVTTAWDGIIPALLTGKFDLIMGGMTVTQLRNLRVNF 117 Query: 117 AFRPITYFDGQGFIMHKK--KGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYH 172 A GQ I++KK + S L+ ++C + GTT ++ ++ Y + Sbjct: 118 AD--PYIVVGQTIIINKKVADKVKSYKDLNDPKYTVCAKLGTTGDIAISKYMPNAKHR-- 173 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 +E E R DA+ D+ + V L + + PLA A+ + Sbjct: 174 --QYETEAEGMMEVVNGRVDAFVYDLPPNA--IFASKHKERVVHLEEPFTFEPLAFAVRR 229 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 GD Y+ V+W + + + G Q N+ + Sbjct: 230 GD---YDFVNWINNYLQQIKGDGKYQVIYNKWFESAD 263 >gi|307132300|ref|YP_003884316.1| putative amino acid ABC transporter periplasmic protein [Dickeya dadantii 3937] gi|306529829|gb|ADM99759.1| Putative amino acid ABC transporter, periplasmic protein [Dickeya dadantii 3937] Length = 263 Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 46/260 (17%), Positives = 100/260 (38%), Gaps = 11/260 (4%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 F++++ +L + A L DI+KRG L+ + F V + +G+D+D Sbjct: 5 KRFLAVVGAALLMVQAGQVMADQLQDIQKRGVLRVAVPQDFPPFGSVGTDLQPQGYDIDM 64 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 R L+S + K+Q +P+ + R LQ+ ++D++ + RE + + + Sbjct: 65 ARYLASEM---KLKLQLVPVTSANRVPYLQTDKVDLVISSLGKNAEREKVIDFSRAYAPF 121 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 F G K + + L G ++ V G ++ L + +E Sbjct: 122 F--LGVFGPKDTDVGAPEALQGKTVGVTRGAVEDMVLTETAPK---TADIKRYEDNNTTL 176 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 +AY + + + A+ P++ + ++ SP + + + + Sbjct: 177 SAYLSGQVQYIATGNLVIAAIA--EKNPAKAPVAKFMLKDSPCYIGLKKDEPALKAKIDE 234 Query: 244 THYAMVTAEEL-GITQKNIN 262 V L G+++K + Sbjct: 235 LIEKAVKDNTLNGLSEKWLK 254 >gi|209521051|ref|ZP_03269783.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] gi|209498507|gb|EDZ98630.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] Length = 270 Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 49/245 (20%), Positives = 88/245 (35%), Gaps = 11/245 (4%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 L F + +A L +I K G LK + F V + +G+D+D L+ A+ Sbjct: 26 LAFHAGVAHADTLDNITKAGVLKVAVPEDYPPFGSVGPDMKPQGYDIDTATLLAKAM--- 82 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 K++ +P+N+ R LQ+ ++D++ + T RE + + Y+ QG Sbjct: 83 SVKLELVPVNSANRIPYLQTGKVDLVISSLGKTPEREKVIDFSTAYAPYY--QGVFGPAD 140 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 +S + L+G ++ G E+ L +K FE AA+ + + Sbjct: 141 IKVSGPADLTGKTVGATRGALEEIGLTQMAPNATIK----RFEDNNATIAAFLSGQVQLI 196 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 A+ P +I SP + + + V L Sbjct: 197 AAGNIVAAAILA--KNPPRRPEPKFVIKNSPCFVGMNKNEPRLQQKVDAAIAQAKQDGTL 254 Query: 255 GITQK 259 G K Sbjct: 255 GAMSK 259 >gi|302541695|ref|ZP_07294037.1| putative glutamate periplasmic binding protein [Streptomyces hygroscopicus ATCC 53653] gi|302459313|gb|EFL22406.1| putative glutamate periplasmic binding protein [Streptomyces himastatinicus ATCC 53653] Length = 305 Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 51/251 (20%), Positives = 94/251 (37%), Gaps = 13/251 (5%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 ++ K+ G+L G+ E A G + GFD++ + +S+++ P I++ Sbjct: 55 SSPTWRKAKRLGYLTVGVKEDQPYLGEKDPATGRYSGFDIEIAKMMSASLGFPPRTIRFR 114 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSV 140 + + R ALQ+ QID LR+ +G A Y GQ ++ I Sbjct: 115 SIASANRETALQNGQIDYYVGTYTINPLRKRLVGFA--GPYYMAGQSLLVRTDTDDIHGP 172 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + L+G ++C AG+T + + H + ++ +++ DA T D Sbjct: 173 ADLAGKTVCSAAGSTPLQRIQHDYPKA----HAVAYDNYSVCVDNLLSYQVDAVTTDNVI 228 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L P E ++ SK P + + D + A E G ++ Sbjct: 229 LLGYAAKA--PEELKLVGKPFSKEPYGIGVPKRDNALRFALDDAIEAH---ERNGDWRRA 283 Query: 261 INQVSKDTTNP 271 N + P Sbjct: 284 YNATLGLSGVP 294 >gi|296129397|ref|YP_003636647.1| extracellular solute-binding protein family 3 [Cellulomonas flavigena DSM 20109] gi|296021212|gb|ADG74448.1| extracellular solute-binding protein family 3 [Cellulomonas flavigena DSM 20109] Length = 294 Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 49/261 (18%), Positives = 91/261 (34%), Gaps = 11/261 (4%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 T+ S + + + G + G F V NG +GFDV+ + ++ + P Sbjct: 43 TAEFPEGSTMARLAEAGSITIGTKFDQPLFGLVGPNGVPEGFDVEIGKLIAGKLGIAPED 102 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KG 136 I++ + R +++ ++DI+ R+ + A Y GQ + K Sbjct: 103 IEWKESISANREPFIENGEVDIVIATYTINDKRKEVVSFA--GPYYLAGQSILTLKSNTD 160 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 I L+G ++C +G+T E L + + E R + DA + Sbjct: 161 IQGPEDLAGKNVCTVSGSTPEANLLENYPDA----TVQALGAYSECIEPLRNGQVDAIST 216 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 D L ND + + D ++ P + DTE+ N ++ Sbjct: 217 DNVILAGFAADND---DLEVRGDPFTEEPYGIGLALDDTEFRNWINDVLEESFEDGSWTE 273 Query: 257 TQK-NINQVSKDTTNPDVQRF 276 + V P V R+ Sbjct: 274 AWESTAGTVLPTPEPPTVDRY 294 >gi|229817228|ref|ZP_04447510.1| hypothetical protein BIFANG_02488 [Bifidobacterium angulatum DSM 20098] gi|229785017|gb|EEP21131.1| hypothetical protein BIFANG_02488 [Bifidobacterium angulatum DSM 20098] Length = 275 Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 49/272 (18%), Positives = 96/272 (35%), Gaps = 11/272 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +F L + + S G + G ++ GI G K +G + GFD Sbjct: 1 MKKTWFKRALAALCALTCAVSLAGC--GSSQSDGKIRIGIKFDQPGLGF-KKSGTYVGFD 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + ++ + +I + +K+R LQ+ +D + T R+ + A Sbjct: 58 VDVAKYIAKKLGYTEDEIVWKEAPSKQREAMLQNGDVDFIIATYSITDERKKVVDFA--G 115 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ ++ K + L+G +C G+T+ +T+ + F + Sbjct: 116 PYFVAGQDLLVRKGDTSVRGPEDLNGKRLCSVTGSTSAVTVKEKFANE---VQLMEQPGY 172 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A + DA T D L L + ++ ++ + +G + Sbjct: 173 AECATALFSGIVDAVTTDDIILAGLASASR--GRLEVVGKPFTQEYYGVGVKKGSNDLKK 230 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 ++ M + + + T NP Sbjct: 231 KINAAITDMEKDGSWKRALADNTKGTNYTPNP 262 >gi|150020368|ref|YP_001305722.1| extracellular solute-binding protein [Thermosipho melanesiensis BI429] gi|149792889|gb|ABR30337.1| extracellular solute-binding protein, family 3 [Thermosipho melanesiensis BI429] Length = 247 Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 46/263 (17%), Positives = 97/263 (36%), Gaps = 20/263 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + V + +I+ L +IK+RG L G F V + + GFD Sbjct: 3 MRRWVAVFVFLIIVGVI-----FGGTLSEIKERGKLIIGTEPTFPPFEYVDKDNNIVGFD 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + ++ + + ++ + L A+ S +ID++ T R + + Sbjct: 58 IDIAKKIAEELGVE---LEIVNLPFDSLIPAIMSDKIDLIIAGMTITKERAKVIDFSI-- 112 Query: 121 ITYFDGQGFIMHKKKGI--SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + Q ++ K + S+++L G + VQ GTT +L ++D + F++ Sbjct: 113 PYFNANQSIVVRKGESFSPKSLNELVGKRVAVQLGTTGDLVVSDIKR-----IKITRFQK 167 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + + R DA D + A + + I + + + +TE Sbjct: 168 FTDAFLELQNKRVDAVVLDEAVARAYVKKFPK---FEVSTVIDTGEKYGIGVKKENTELL 224 Query: 239 NIVSWTHYAMVTAEELGITQKNI 261 V+ + + + +K Sbjct: 225 EFVNKVISNLFKSPYDVLVEKWF 247 >gi|296454584|ref|YP_003661727.1| family 3 extracellular solute-binding protein [Bifidobacterium longum subsp. longum JDM301] gi|296184015|gb|ADH00897.1| extracellular solute-binding protein, family 3 [Bifidobacterium longum subsp. longum JDM301] Length = 279 Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 50/272 (18%), Positives = 104/272 (38%), Gaps = 21/272 (7%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 ++ L + + + A + G ++ GI G K +G + GFDVD + Sbjct: 14 VIAALAAVACTMSLAACGAD------ETGKIRIGIKFDQPGLGF-KKSGTYVGFDVDVAK 66 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ + +I + +K+R +Q+ +D++ T R+ ++ A + Sbjct: 67 YIAKKLGYSEDQIIWKEAPSKQREAMIQNGDVDMILATYSITDERKKAVSFA--GPYFVA 124 Query: 126 GQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 GQ ++ K I+ L+G +C G+T+ T+ + F + + E Sbjct: 125 GQDLLVRKDDNSINGPEDLNGKRLCSVTGSTSAATVKEKFASE---VQLMEQPGYAECAT 181 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 A + DA T D L L + + ++ ++ I +GDT+ ++ Sbjct: 182 ALFSGIVDAVTTDDIILAGLASASR--GKLKVVGKPFTQEHYGVGIKKGDTQLATKINNA 239 Query: 245 HYAMVT--AEELGITQKNINQVSKDTTNPDVQ 274 M+ + E I+ + PDV+ Sbjct: 240 IVDMIQDGSWENAIS----DNTKGTNYTPDVR 267 >gi|322689657|ref|YP_004209391.1| glutamate ABC transporter substrate-binding protein [Bifidobacterium longum subsp. infantis 157F] gi|320460993|dbj|BAJ71613.1| glutamate ABC transporter substrate binding component [Bifidobacterium longum subsp. infantis 157F] Length = 266 Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 50/272 (18%), Positives = 104/272 (38%), Gaps = 21/272 (7%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 ++ L + + + A + G ++ GI G K +G + GFDVD + Sbjct: 1 MIAALAAVACTMSLAACGAD------ETGKIRIGIKFDQPGLGF-KKSGTYVGFDVDVAK 53 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ + +I + +K+R +Q+ +D++ T R+ ++ A + Sbjct: 54 YIAKKLGYSEDQIIWKEAPSKQREAMIQNGDVDMILATYSITDERKKAVSFA--GPYFVA 111 Query: 126 GQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 GQ ++ K I+ L+G +C G+T+ T+ + F + + E Sbjct: 112 GQDLLVRKDDNSINGPEDLNGKRLCSVTGSTSAATVKEKFASE---VQLMEQPGYAECAT 168 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 A + DA T D L L + + ++ ++ I +GDT+ ++ Sbjct: 169 ALFSGIVDAVTTDDIILAGLASASR--GKLKVVGKPFTQEYYGVGIKKGDTQLATKINNA 226 Query: 245 HYAMVT--AEELGITQKNINQVSKDTTNPDVQ 274 M+ + E I+ + PDV+ Sbjct: 227 IVDMIQDGSWENAIS----DNTKGTNYTPDVR 254 >gi|296272604|ref|YP_003655235.1| family 3 extracellular solute-binding protein [Arcobacter nitrofigilis DSM 7299] gi|296096778|gb|ADG92728.1| extracellular solute-binding protein family 3 [Arcobacter nitrofigilis DSM 7299] Length = 260 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 48/266 (18%), Positives = 104/266 (39%), Gaps = 13/266 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M+K+ + +L + L S NA+ L DIKK G +K + F V + +G+D Sbjct: 1 MFKNVLLKVLAIGALLSVSLL-NANQLADIKKSGVIKIAVPQDFAPFGSVSKDMSIQGYD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + ++ + K++ +P+ + R LQ+ ++++ + R ++ + Sbjct: 60 VDTAKLIAKKLG---VKLELIPVASANRIPYLQTGKVNLTISSLGKNPERARAIDFSDAY 116 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 ++ G K +SS + L G ++ V GT ++ L+ + +E Sbjct: 117 AIFY--LGVFGSKDVKVSSPADLKGKTVGVTRGTIEDIELSKLV---DPSVTIKRYEDNN 171 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +++ + + + + N E + +I +P I + + E Sbjct: 172 MTTSSFLSGQVKLIATGNVIVSEMARKNPGKEE-AMTKFMIVNNPCYIGIKKHEPELMAF 230 Query: 241 VSWTHYAMVTAEELGITQKNINQVSK 266 ++ +E G K N+ K Sbjct: 231 INKFIKEN---KENGKLNKISNKWFK 253 >gi|302545376|ref|ZP_07297718.1| amino acid ABC transporter, amino acid-binding protein [Streptomyces hygroscopicus ATCC 53653] gi|302462994|gb|EFL26087.1| amino acid ABC transporter, amino acid-binding protein [Streptomyces himastatinicus ATCC 53653] Length = 348 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 47/259 (18%), Positives = 86/259 (33%), Gaps = 16/259 (6%) Query: 20 FSTNASILGDIKKR-------GFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAI 71 S + + IK+R G L G++ + A G+ GFD+D RA++ I Sbjct: 77 SSASGPAIKRIKERKIHGHKVGKLIAGVDQNSYRWGYRDPATGELTGFDIDIVRAIAKDI 136 Query: 72 FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131 F DP + Y + +R ALQ ++DI+ R R + + + GQ ++ Sbjct: 137 FGDPDAVIYRTIPTSQRIKALQQGKVDIVVRTMTINCDRIKDVAFSTA--YFQAGQQVLV 194 Query: 132 HKKKGISSVS-QLSGASICVQAGTTTELTLADYFK--AHNMKYHPIVFERVEEIDAAYRA 188 I+ + L G +C G+T E L + K + + Sbjct: 195 PDDSSITGYNRTLRGKRVCTAQGSTAEAVLDEPEKGAEALGAIKVKPVPNQLDCLVRLQM 254 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 + DA D + + ++ + A+ + D + V+ Sbjct: 255 GQVDAVITDNALAAGQAAQDPS---VKLVGPRFTDELYGVAMNKNDDDLVRRVNQVLEDY 311 Query: 249 VTAEELGITQKNINQVSKD 267 Q+ D Sbjct: 312 RKGGADSPWQRAYRTWLAD 330 >gi|257461484|ref|ZP_05626580.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] gi|257441207|gb|EEV16354.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] Length = 268 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 59/275 (21%), Positives = 110/275 (40%), Gaps = 25/275 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ +L I A+ L IK+ ++ + F+ V NG ++GFD Sbjct: 1 MKKSLFLILLSCIFAL-------ANSLSQIKQSKVIRIAVYENEPPFSRVTDNG-FEGFD 52 Query: 61 VDFCRALSSAIFDD-PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 V+ A+ I D +I+ +P++A+ RF ++Q+ Q D+L T R+ + + Sbjct: 53 VELANAIGGKILGDTGGRIELIPVSAQARFPSIQNNQADMLIAAASVTEERKKNYEFSM- 111 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 G + K I +S L G + V G+T E F + Y+ + + Sbjct: 112 -PYLSVNSGVLTRKSDNIQKMSDLRGKKVGVIRGSTGEA-----FMQKDGGYNLVYCKNS 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + ++ D D L+ + PS V + + L A+ +G+ + Sbjct: 166 SDCYKRLKSGEIDGACDDN--LFVMVYPVADPSVEVNIKSLGENVFLGIAMQKGNADLAE 223 Query: 240 IVSWTHYAMVTAEELGITQKNIN----QVSKDTTN 270 V+ A+++ + G +K N K T + Sbjct: 224 AVN---QALISLSKEGFFKKAYNDTFEPFYKGTVD 255 >gi|257461485|ref|ZP_05626581.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] gi|257441208|gb|EEV16355.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] Length = 268 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 54/272 (19%), Positives = 107/272 (39%), Gaps = 19/272 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K FF+ +L I +F A+ L +IK+ ++ G+ F++ G ++GF+ Sbjct: 1 MKKSFFLILLSAIFVF-------ANSLSEIKQSKVIRVGVYENEPPFSKSSEKG-FEGFE 52 Query: 61 VDFCRALSSAIFDD-PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 V+ AL+ IF + +I+ +P+ + RF LQ+ Q D++ T R+ S+ + Sbjct: 53 VELANALAGKIFGNSGGRIELIPVTNEVRFPMLQNNQADMIIAAASITEERKGSVDFSM- 111 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G + K I + L G I + TT E + + Y+ Sbjct: 112 -PYFTVNLGILTKKDSNIHKIGDLMGKKIGIIRKTTGEAYI-----KKDGGYNVSYCNDS 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + ++ D Y + L+ + P+ V + ++ L A+ +G+ E Sbjct: 166 VDCYRRLKSGEIDGYCNNN--LFVMVYPIVDPAVEVNIKNLGDNVFLGVAVQKGNAELLE 223 Query: 240 IVSWTHYAMVTAEEL-GITQKNINQVSKDTTN 270 ++ A+ + K T + Sbjct: 224 AINKGLIALSKEGFFKKAYEDTFESFYKGTVD 255 >gi|330965547|gb|EGH65807.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 261 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 52/274 (18%), Positives = 100/274 (36%), Gaps = 14/274 (5%) Query: 1 MYKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + + L L + +A+ L D+ RG LK + F V + +G Sbjct: 1 MTKRYSALLTALFASLMLSQTPAHANGLDDVVARGTLKVAVPQDFPPFGSVGPDMKPRGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D + L+ + K++ P+N+ R L + ++D++ + RE + + Sbjct: 61 DIDTAQLLADRL---KVKLELTPVNSTNRIPFLTTGKVDLVISSLGKNPDREKVIDFSRA 117 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 ++ + ++ L G +I V G ++ L+ FE Sbjct: 118 YAPFY--LAVFGPPDSPVKDIADLKGKTISVTRGAIEDIELSKVAPE---GATIKRFEDN 172 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AAY A + D + A+ + P L + SP+ + +G E + Sbjct: 173 NSTIAAYLAGQTDLIASGNVVMVAI--SERNPKRIPALKVKLKDSPVYVGVNKGQPELLS 230 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 V+ A A+ G +K K+ D+ Sbjct: 231 KVNEILNA---AKADGTLEKASVTWLKEPLPADL 261 >gi|331697741|ref|YP_004333980.1| ABC transporter periplasmic subunit [Pseudonocardia dioxanivorans CB1190] gi|326952430|gb|AEA26127.1| ABC-type transporter, periplasmic subunit family 3 [Pseudonocardia dioxanivorans CB1190] Length = 295 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 50/304 (16%), Positives = 100/304 (32%), Gaps = 37/304 (12%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS----------------------ILGDIKKRGFLKC 38 M V L L ++ S I++RG + Sbjct: 1 MKLRTLVVGLVAGALALSACGKEGSPGSEGSGVSQQVAAGVQVTGSPTFDAIQQRGRVVI 60 Query: 39 GINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97 G+ G A G + GFD++ R +++ + KI Y + + R + ++ Sbjct: 61 GVKDDQPGLGFKDATTGQFSGFDIEIARLVAAQLGYGADKIDYKTVPSAAREDTISRGEV 120 Query: 98 DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTT 156 D R+ + A + GQG ++ I+ L G +C G+T Sbjct: 121 DYYVGTYTINDNRKQRVSFA--GPYFIAGQGLLVRSDETAITGKDTLKGKKVCSVTGSTP 178 Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216 + D + + + F+ + A + D T D + L + +P + + Sbjct: 179 IQRVRD--QGLTEPGNIVEFQTYTQCVDQLLAKQVDVVTTDDAILKGYA--SQQPDKLKV 234 Query: 217 LPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT----TNPD 272 + + S P + + D ++ A + G QK + + + P Sbjct: 235 VGETFSTEPYGIGLNKDDAALRAKINDILQ---KAYDDGTWQKIYDSTLGKSGSAGSPPP 291 Query: 273 VQRF 276 +QR+ Sbjct: 292 LQRY 295 >gi|239620726|ref|ZP_04663757.1| glutamate-binding protein of ABC transporter system [Bifidobacterium longum subsp. infantis CCUG 52486] gi|312132337|ref|YP_003999676.1| hisj1 [Bifidobacterium longum subsp. longum BBMN68] gi|239516302|gb|EEQ56169.1| glutamate-binding protein of ABC transporter system [Bifidobacterium longum subsp. infantis CCUG 52486] gi|311773858|gb|ADQ03346.1| HisJ1 [Bifidobacterium longum subsp. longum BBMN68] Length = 279 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 50/272 (18%), Positives = 104/272 (38%), Gaps = 21/272 (7%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 ++ L + + + A + G ++ GI G K +G + GFDVD + Sbjct: 14 VIAALAAVACTMSLAACGAD------ETGKIRIGIKFDQPGLGF-KKSGTYVGFDVDVAK 66 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ + +I + +K+R +Q+ +D++ T R+ ++ A + Sbjct: 67 YVAKKLGYSEDQIIWKEAPSKQREAMIQNGDVDMILATYSITDERKKAVSFA--GPYFVA 124 Query: 126 GQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 GQ ++ K I+ L+G +C G+T+ T+ + F + + E Sbjct: 125 GQDLLVRKDDNSINGPEDLNGKRLCSVTGSTSAATVKEKFASE---VQLMEQPGYAECAT 181 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 A + DA T D L L + + ++ ++ I +GDT+ ++ Sbjct: 182 ALFSGIVDAVTTDDIILAGLASASR--GKLKVVGKPFTQEYYGVGIKKGDTQLATKINNA 239 Query: 245 HYAMVT--AEELGITQKNINQVSKDTTNPDVQ 274 M+ + E I+ + PDV+ Sbjct: 240 IVDMIQDGSWENAIS----DNTKGTNYTPDVR 267 >gi|257461101|ref|ZP_05626199.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] gi|257441475|gb|EEV16620.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] Length = 267 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 61/272 (22%), Positives = 108/272 (39%), Gaps = 26/272 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F ++ LF A+ L IK++G ++ GI+ L + V +G + GF+ Sbjct: 1 MKKIIFALLIASCSLF-------ANSLAQIKEKGLIRIGIDGSLPPLS-VSEDGKYSGFE 52 Query: 61 VDFCRALSSAIFDD-PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 + LS IF D KI+Y+ +R A+Q ++D+ T RE + Sbjct: 53 ISLIEELSKEIFGDKGGKIEYVVTLGNDRITAVQDNKVDLDIAAITVTKEREKLVDF--S 110 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G + I +V L I + GTT DYF + I Sbjct: 111 NPYFSVNIGVLTRTDDNIKTVDDLQDKEILAEPGTTA----FDYFNKEG--FKVISCASS 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A ++ R Y D + + + + V + ++ + LA A+ +G+ + N Sbjct: 165 SECFRALKSGRGSGYADDNMVVLGYSVVDRKVE--VNIKNLGTTDFLAIAVQKGNDDLLN 222 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 ++ +V + G +K N D+ +P Sbjct: 223 ALND---GLVKLSKNGFFKKIFN----DSIDP 247 >gi|317053657|ref|YP_004118791.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b] gi|316952762|gb|ADU72235.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b] Length = 261 Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats. Identities = 63/260 (24%), Positives = 105/260 (40%), Gaps = 11/260 (4%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 L L+ L F A+ L DIK RG L+ + A G G DVD + L+ Sbjct: 7 TLALVALCALPFLAQANSLDDIKSRGVLRVATTVDAAPWGFTDAAGKPTGLDVDLAQKLA 66 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 + K+Q + R L S+++D+L + R + + + G Sbjct: 67 DNMG---VKLQLQQVTGANRIPYLMSRKVDVLIAALGSSPERAKLVNFSEPYAAVYLGV- 122 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 + K ++ +S LS A+I V G+T +LTL+D N + E +A+ + Sbjct: 123 YGGSDVKKVTKLSDLSNATIAVPKGSTPDLTLSDQNPQGNY----LRLEDTASAVSAFLS 178 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 + + + L A K+ + P++H+ L ++ KSP AI G E ++ Sbjct: 179 GQAPMFAENN--LIAQKVAQENPAKHIELKYLLRKSPAYIAIRPGQPELMAAINQFIDKS 236 Query: 249 VTAEEL-GITQKNINQVSKD 267 EL + QK N D Sbjct: 237 TQDGELPALRQKWFNDAQND 256 >gi|330812507|ref|YP_004356969.1| putative ABC transporter, periplasmic component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380615|gb|AEA71965.1| putative ABC transporter, periplasmic component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 261 Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats. Identities = 50/267 (18%), Positives = 93/267 (34%), Gaps = 13/267 (4%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 + L +A L D+ KRG LK + F V + +G D+D + Sbjct: 8 LLTALFASLMLCQLPAHADGLEDVVKRGTLKVAVPQDFPPFGSVGPDMKPRGLDIDTAKL 67 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + K++ P+N+ R L + ++D++ + RE + + ++ Sbjct: 68 LADQL---KVKLELTPVNSTNRIPFLTTGKVDLVISSLGKNPEREKVIDFSSAYAPFY-- 122 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 I+++ L G +I V G ++ L FE AAY Sbjct: 123 LAVFGPPDAAINNLDDLKGKTISVTRGAIEDIELTKVAPE---GTTIKRFEDNNSTIAAY 179 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 A + D + A+ + P L + SP+ + + + V+ Sbjct: 180 LAGQVDLIASGNVVMVAI--SERNPKRVPALKVKLKDSPVYVGVNKNEPALLEKVNQIL- 236 Query: 247 AMVTAEELGITQKNINQVSKDTTNPDV 273 TA+ G +KN K D+ Sbjct: 237 --ATAKTDGSLEKNSQTWLKQPLPADL 261 >gi|311103255|ref|YP_003976108.1| extracellular solute-binding protein, family 3 family protein 2 [Achromobacter xylosoxidans A8] gi|310757944|gb|ADP13393.1| bacterial extracellular solute-binding protein, family 3 family protein 2 [Achromobacter xylosoxidans A8] Length = 303 Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats. Identities = 49/260 (18%), Positives = 91/260 (35%), Gaps = 11/260 (4%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS----AIFD 73 ++ + S L IK+ G + G V FA + N G+ V+ C+ ++ A+ Sbjct: 19 SAHAEGPSRLDKIKETGVITLGHPETSVPFAYLDGNQKPIGYTVEICQEVAQYVKAALKL 78 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 +++Y P + R L + ID+ NT L R + A P T+ + K Sbjct: 79 PKLEVRYNPTTSATRIPLLANGTIDLECGNTTNNLERHKLVSFA--PTTFVAQVVLVARK 136 Query: 134 KKGI--SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191 G+ +++ G SI QAG T ++ N+ + E + R Sbjct: 137 DGGVDPNNLESFRGKSIAAQAGGQTFRLISQLNAKGNLGITMAPTKDTAETILMVESGRA 196 Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 D Y ++ P VI + +P + D + +V ++ Sbjct: 197 AGSANDDGIAYGAVASSKNPDAFVIGTKGLEMAPYGIMEPKDDPAFKKVVDDAVRDLI-- 254 Query: 252 EELGITQKNINQVSKDTTNP 271 + G ++ P Sbjct: 255 -KTGKVAAIYDKYFNSPIPP 273 >gi|146296044|ref|YP_001179815.1| extracellular solute-binding protein [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145409620|gb|ABP66624.1| amino acid ABC transporter substrate-binding protein, PAAT family [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 267 Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats. Identities = 58/274 (21%), Positives = 97/274 (35%), Gaps = 15/274 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 K + +L L I F S +N S L IK+ G++ N + Sbjct: 4 KKLITICLLVLFIATFLSGCSNKNQNISTLQKIKQNKEFVVGMDNTFPPMEFTDDNNNTV 63 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD ++ + +K++ + ++ AL+SK+ D + T R+ + Sbjct: 64 GFDVDLANEIAKRLG---AKLKIVAVDWSGIQSALKSKKFDAIISCFSITDERKKA--FN 118 Query: 118 FRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + Q + K I S L G I VQA TT + + K N + + Sbjct: 119 LAGPYLYIRQVIAVKKGDTSIKSFEDLKGIKIGVQANTTGDSAVQK-MKFINYEKDVTRY 177 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 ER+ + R A D Y K P + I P + K P+ A+ + D + Sbjct: 178 ERITDAFNDLDIGRIKAVVIDSVVAYYYKKQ--NPEKFDIAPAELEKEPVGIALRKEDKD 235 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 Y + + + K +D T Sbjct: 236 LYEEIQKILNQLKEDGTIAKISK--KWFGEDITK 267 >gi|20807013|ref|NP_622184.1| ABC-type amino acid transport system, periplasmic component [Thermoanaerobacter tengcongensis MB4] gi|20515498|gb|AAM23788.1| ABC-type amino acid transport system, periplasmic component [Thermoanaerobacter tengcongensis MB4] Length = 260 Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats. Identities = 54/273 (19%), Positives = 104/273 (38%), Gaps = 24/273 (8%) Query: 2 YKDFFVSILCLIILFF--TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG---DW 56 K F++ + L F + + + + IK++G + G + F K G + Sbjct: 3 KKSLFLAFAVVFALAFMLSGCGSKFNTVDQIKQKGVIVMGTSADFPPFEFHKVEGGKDEI 62 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFD+D A++ + K++ ++ K ALQ+ ++D++ T R+ S+ Sbjct: 63 VGFDIDIANAIAKKLG---VKLEIKDMDFKGLIPALQAGRVDMVIAGMTPTAERKKSVDF 119 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + Y Q ++ IS L +I VQ GTT+E Sbjct: 120 --SDLYYDSRQVVVVKNDSPISKFDDLKVKTIAVQIGTTSEEA-----AKKIPNVKLKQL 172 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL--PDIISKSP-LAPAIIQG 233 RV + + RCDA + + A + IL +I + A A+ +G Sbjct: 173 NRVSDEFMDLQNGRCDAIVVEDTVAKAY---LKEYKDMKILYMDEINNVENGSAVAVAKG 229 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 + ++V+ + + E K +++ K Sbjct: 230 NKSLLDVVNEVIKELKQSGE---YDKLVDKWFK 259 >gi|223999121|ref|XP_002289233.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220974441|gb|EED92770.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 871 Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats. Identities = 73/332 (21%), Positives = 135/332 (40%), Gaps = 54/332 (16%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L +++RG+++CG+ + + F D CR++++ + DP I ++ Sbjct: 357 TLAIVQERGYVRCGLFQ---------KKTEARNFRRDLCRSVAAVVLLDPDSIIETDVHV 407 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISL-----GLAFRPITYFDGQGFIMHKKKGI--- 137 RF L + +D+L+ +TL RE++ G +F Y+DG F + Sbjct: 408 NNRFPMLYDRAVDLLAAGETYTLEREVNEPTTGAGFSFTTPYYYDGMVFGGNSTSVYCAE 467 Query: 138 --SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 + + ICVQ TT ++ F A + E + +C+A+ Sbjct: 468 ERKRYDECANLKICVQESTTHYSYVSANFAAGFYT----SVRSLSESAVFFLQDKCNAFA 523 Query: 196 GDIS-ALYALKLTNDRPSEHVILPDI-ISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 G+ L ++ + N + V++ + + PL+ A D EW +IV+W A++ EE Sbjct: 524 GERMEILSSVSIQNLTETNAVVIGNKTYTSEPLSIATRNDDQEWSDIVNWVIQALIFGEE 583 Query: 254 LGITQKNI---NQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMF 310 G+ + + N DTTN + + +GNYG++F Sbjct: 584 NGLVKNSSLCENSTIVDTTNTGLNFL---------------------NSVYCVGNYGQLF 622 Query: 311 DRNLGNQSELKIPRGYNALWSKG-GLMYAPPI 341 RN E + R ++G G++Y P Sbjct: 623 ARN----HEDPMDRSQMNEVNQGTGMLYVIPF 650 Score = 47.2 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 37/179 (20%), Positives = 59/179 (32%), Gaps = 33/179 (18%) Query: 164 FKAHNMKYHPIVFERVEE--IDAAYRAHRCDAYTG-------DISALYALK-LTNDRPSE 213 F + + VF EE R D G D L + + LT P Sbjct: 697 FDGNVYAVNVTVFSEDEEERAYLELDKRRLDVLVGVRATQNYDFEDLPSRRGLTFSSPYF 756 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 + + S + D + + V+ + + A E IT++ Q+ T Sbjct: 757 YGDESGEVDVSFFPMVTREDDVLFSSFVNCIVLSTLYAAENAITKEVYVQMPLIT----- 811 Query: 274 QRFLGIDKSSNIGEALGLTKDWTYR-IIRHMGNYGEMFDRN--LGNQSELKIPRGYNAL 329 G + W R I GNY EM++++ +G S+ R NAL Sbjct: 812 --IFGNEYL------------WALRDAISANGNYDEMYEKHFGIGKDSD-PTSRARNAL 855 >gi|186471430|ref|YP_001862748.1| extracellular solute-binding protein [Burkholderia phymatum STM815] gi|184197739|gb|ACC75702.1| extracellular solute-binding protein family 3 [Burkholderia phymatum STM815] Length = 277 Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats. Identities = 57/273 (20%), Positives = 101/273 (36%), Gaps = 18/273 (6%) Query: 6 FVSILCLI----ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 V +L L + + S L + +RG L+ G F +G G+DV Sbjct: 16 VVGLLALAGCTKVATPGQDAATGSTLQAVLQRGTLRVGDCLTFAPFGFYDKSGQPDGYDV 75 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D + L+ + K++ + + R LQ+ ++D++ N L R + +AF Sbjct: 76 DLAKELAKQMG---VKLEMVNTTSANRIPNLQTAKVDVVFCNFTRNLER--AKEIAFTTP 130 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + ++ K GI SV +SG +I G+T D +A + F+ E Sbjct: 131 YVVASEALLVKKSSGIQSVKDMSGHTIATVKGSTN----GDEVRALGIPVKIQEFDSSEA 186 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A + + DA D + L P V ++ A + GD W N + Sbjct: 187 AILAVKQGQADAMIEDNNFLAYQAKL--DPELTVTNEALVPLEYNAFGVKAGDQVWLNYL 244 Query: 242 SWTHYAMVTAEELG--ITQKNINQVSKDTTNPD 272 + + + A +L + K + NP Sbjct: 245 NLFLF-NINASKLNAQLYTKWFGTGPRYPLNPQ 276 >gi|227891534|ref|ZP_04009339.1| glutamine-binding protein [Lactobacillus salivarius ATCC 11741] gi|227866681|gb|EEJ74102.1| glutamine-binding protein [Lactobacillus salivarius ATCC 11741] Length = 276 Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats. Identities = 46/283 (16%), Positives = 102/283 (36%), Gaps = 21/283 (7%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKR----GFLKCGINTGLVGFAEVK-AN 53 M + + L+++FF +I +R + G+ F + Sbjct: 1 MKNLRKVTLLFSALLMIFFLGACGKKDKAANIAQRTEQTKTVTWGVKADTRLFGLMNIKT 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G +GFDVD + L+ ++ +K++ + AK + L+++ ID + T R Sbjct: 61 GQIEGFDVDMAKTLTKKMYGKDAKVKLVQTTAKTKIPLLKNQNIDAVIAAMTITPERRKI 120 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKY 171 + + + GQ ++ + + +V L G + GTT + + Sbjct: 121 VEFSQ--PYFAAGQSLLVPENSTVKNVHDLNKKGMVVLAVKGTTAVANIHKFAPKA---- 174 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + F+ + A ++ + A + D L + N + ++ + P A+ Sbjct: 175 KVLEFDDYGQAFTALKSGQGQAMSTDNGILAGIASENPG---YQVVGGNFTNEPYGIAVD 231 Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 +G T+ + A+ + G K I + + D + Sbjct: 232 KGQTQMMKRID---KALDELKADGTYDKLIQKWFGNVKGFDAK 271 >gi|189438884|ref|YP_001953965.1| amino acid ABC transporter periplasmic protein [Bifidobacterium longum DJO10A] gi|189427319|gb|ACD97467.1| ABC-type amino acid transport system periplasmic component [Bifidobacterium longum DJO10A] gi|291516218|emb|CBK69834.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [Bifidobacterium longum subsp. longum F8] Length = 279 Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats. Identities = 50/272 (18%), Positives = 104/272 (38%), Gaps = 21/272 (7%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 ++ L + + + A + G ++ GI G K +G + GFDVD + Sbjct: 14 VIAALAAVACTMSLAACGAD------ETGKIRIGIKFDQPGLGF-KKSGTYVGFDVDVAK 66 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ + +I + +K+R +Q+ +D++ T R+ ++ A + Sbjct: 67 YVAKKLGYSEDQIIWKEAPSKQREAMIQNGDVDMILATYSITDERKKAVSFA--GPYFVA 124 Query: 126 GQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 GQ ++ K I+ L+G +C G+T+ T+ + F + + E Sbjct: 125 GQDLLVRKDDNSINGPEDLNGKRLCSVTGSTSAATVKEKFASE---VQLMEQPGYAECAT 181 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 A + DA T D L L + + ++ ++ I +GDT+ ++ Sbjct: 182 ALFSGIVDAVTTDDIILAGLASASR--GKLKVVGKPFTQEYYGVGIKKGDTQLATKINNA 239 Query: 245 HYAMVT--AEELGITQKNINQVSKDTTNPDVQ 274 M+ + E I+ + PDV+ Sbjct: 240 IVDMIQDGSWENAIS----DNTKGTNYTPDVR 267 >gi|237797984|ref|ZP_04586445.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331020835|gb|EGI00892.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 261 Score = 166 bits (422), Expect = 3e-39, Method: Composition-based stats. Identities = 53/274 (19%), Positives = 98/274 (35%), Gaps = 14/274 (5%) Query: 1 MYKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + + L L + +A+ L D+ RG LK + F V + +G Sbjct: 1 MTKRYSALLTALFASLMLSQTPAHANGLDDVVARGTLKVAVPQDFPPFGSVGPDMKPRGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D + L+ + K++ P+N+ R L + ++D++ + RE + + Sbjct: 61 DIDTAQLLADRL---QVKLELTPVNSTNRIPFLTTGKVDLVISSLGKNPDREKVIDFSRA 117 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 ++ + V+ L G +I V G ++ L+ FE Sbjct: 118 YAPFY--LAVFGPPDSPVKDVADLKGKTISVTRGAIEDIELSAVAPE---GTTIKRFEDN 172 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AAY A + D + A+ + P L + SP+ + +G E Sbjct: 173 NSTIAAYLAGQTDLIASGNVVMVAI--SERNPKRIPALKVKLKDSPVYVGVNKGQPELLG 230 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 V+ A A+ G +K K D+ Sbjct: 231 KVNEILNA---AKADGALEKASETWLKQPLPADL 261 >gi|323698191|ref|ZP_08110103.1| extracellular solute-binding protein family 3 [Desulfovibrio sp. ND132] gi|323458123|gb|EGB13988.1| extracellular solute-binding protein family 3 [Desulfovibrio desulfuricans ND132] Length = 274 Score = 166 bits (422), Expect = 3e-39, Method: Composition-based stats. Identities = 58/278 (20%), Positives = 103/278 (37%), Gaps = 24/278 (8%) Query: 2 YKDFFVSILCLIILFFTSFSTNA--------SILGDIKKRGFLKCGINTGLVGFAEVKAN 53 K + L +L + S A S L I + G L+ G+ G + F Sbjct: 1 MKRIITLVAVLSLLMCAAMSAQAADIELAKKSTLEQIVQSGTLRVGLEAGYMPFEMTDKK 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ GFDVD + ++ A+ K++ + L S + DI++ R + Sbjct: 61 GNVVGFDVDMVKEMAKAMG---VKLELVNTAWDGIIPGLLSGKYDIIASGMTINQERNLK 117 Query: 114 LGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQA--GTTTELTLADYFKAHNM 169 + A GQ ++ KK I S L+ A + + + GTT E F Sbjct: 118 VNFAN--PYIIVGQTALIAKKSADKIKSWKDLNQAGVVITSKLGTTGEQAAKRLFPKATY 175 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 K FE ++ + DA D+ + + + V L + + PL A Sbjct: 176 K----SFEMEDQAMLETMNGKADATVYDLPMTSIFYTQHGKDAGMVFLDEPFTYEPLGWA 231 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 I +GD ++ +W + +V + G ++ N+ Sbjct: 232 INKGDPDFL---NWLNNFIVQIKNDGRYERIYNKWFGS 266 >gi|320007608|gb|ADW02458.1| extracellular solute-binding protein family 3 [Streptomyces flavogriseus ATCC 33331] Length = 304 Score = 166 bits (422), Expect = 3e-39, Method: Composition-based stats. Identities = 52/261 (19%), Positives = 98/261 (37%), Gaps = 18/261 (6%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 + +KRG+L G E A G + GFD++ R +++++ +P I++ Sbjct: 52 ESKTWKKAEKRGYLVVGAKEDQPYLGEKDPATGVYSGFDIEIARMMAASLGFEPDTIRFR 111 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSV 140 + + R ALQ+ QID +R+ +G A Y GQG ++ + I Sbjct: 112 TIASANRETALQNGQIDYYVGTYTINDMRKKLVGFA--GPYYMAGQGLLVRTDENDIHGP 169 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L+G ++C AG+T +A + + + ++ + DA T D + Sbjct: 170 QDLAGKTVCSAAGSTPYQRIAADYPEAD----LVAYDTYSICVDNLLTFQVDAVTTDDAI 225 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L P E ++ S+ P + + D + E+ G +K Sbjct: 226 LLGFAAKA--PDEMKVVGKPFSEEPYGIGVPRSDNALRLALDDALEEN---EKNGNWKKA 280 Query: 261 INQVSKDT-----TNPDVQRF 276 + T P + R+ Sbjct: 281 FEATLGLSGVPAPTPPPIDRY 301 >gi|312135672|ref|YP_004003010.1| extracellular solute-binding protein family 3 [Caldicellulosiruptor owensensis OL] gi|311775723|gb|ADQ05210.1| extracellular solute-binding protein family 3 [Caldicellulosiruptor owensensis OL] Length = 266 Score = 166 bits (422), Expect = 3e-39, Method: Composition-based stats. Identities = 62/290 (21%), Positives = 110/290 (37%), Gaps = 31/290 (10%) Query: 1 MYKD-----FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 MYK +S+ ++ +S + + + L IKK G++ N + Sbjct: 1 MYKKVIALVLLISLFIPLLSGCSSNNQDMTTLEKIKKTKEFAVGMDNTFPPMEFADDNNN 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFDVD ++ + +K++ + ++ AL+SK+ D + T R+ + Sbjct: 61 AVGFDVDLANEIAKKLG---AKLKIVTVDWSGIQSALKSKKFDAIISCFSITDERKKA-- 115 Query: 116 LAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + Q + + I S L G I VQA TT + + K N + Sbjct: 116 FNLAGPYLYIRQVIAVKRGDNSIKSFEDLKGIKIGVQANTTGDSAVQK-MKFINYEKDVT 174 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +ER+ + R A D Y K P + I P + K P+ A+ + D Sbjct: 175 RYERITDAFNDLDIGRIKAVVIDSVVAYYYKKQ--NPEKFDIAPAELEKEPVGIALRKED 232 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV-QRFLGIDKSS 283 E YN + QK ++Q+ KD T + +++ G D + Sbjct: 233 KELYNEI----------------QKILDQLKKDGTIAKISEKWFGEDITK 266 >gi|317401661|gb|EFV82286.1| amino acid ABC transporter periplasmic amino acid-binding protein [Achromobacter xylosoxidans C54] Length = 302 Score = 166 bits (422), Expect = 3e-39, Method: Composition-based stats. Identities = 48/253 (18%), Positives = 88/253 (34%), Gaps = 11/253 (4%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD----DPSKIQY 80 S L I+ G + G V FA + N G+ V+ C+ ++ I ++Y Sbjct: 25 SRLDKIRDTGVITIGHPETSVPFAYLDGNQKPIGYTVEICQEIAQHIKTALKLPKLDVRY 84 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI--S 138 P + R L + ID+ NT L R + A P T+ + K G+ + Sbjct: 85 NPTTSATRIPLLANGTIDLECGNTTNNLERHKLVSFA--PTTFVAQVVLVARKDGGVDPN 142 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 +++ G +I QAG T ++ N+ + E + R D Sbjct: 143 NLASFRGKTIAAQAGGQTFKLISRLNAEGNLGISMAPTKDTAETLLMVESGRAAGSANDD 202 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 Y + ++ P VI + +P + D + +V A++ + G Sbjct: 203 GIAYGVVASSKNPDVFVIGTKGLELAPYGIMQPKDDPAFKKVVDD---AVLDMMKSGRVA 259 Query: 259 KNINQVSKDTTNP 271 ++ P Sbjct: 260 AIYDKYFNSPIPP 272 >gi|23464650|ref|NP_695253.1| glutamate-binding protein of ABC transporter system [Bifidobacterium longum NCC2705] gi|317481691|ref|ZP_07940724.1| bacterial extracellular solute-binding protein, family 3 [Bifidobacterium sp. 12_1_47BFAA] gi|23325209|gb|AAN23889.1| glutamate-binding protein of ABC transporter system [Bifidobacterium longum NCC2705] gi|316916870|gb|EFV38259.1| bacterial extracellular solute-binding protein, family 3 [Bifidobacterium sp. 12_1_47BFAA] Length = 266 Score = 166 bits (422), Expect = 3e-39, Method: Composition-based stats. Identities = 50/272 (18%), Positives = 104/272 (38%), Gaps = 21/272 (7%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 ++ L + + + A + G ++ GI G K +G + GFDVD + Sbjct: 1 MIAALAAVACTMSLAACGAD------ETGKIRIGIKFDQPGLGF-KKSGTYVGFDVDVAK 53 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ + +I + +K+R +Q+ +D++ T R+ ++ A + Sbjct: 54 YVAKKLGYSEDQIIWKEAPSKQREAMIQNGDVDMILATYSITDERKKAVSFA--GPYFVA 111 Query: 126 GQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 GQ ++ K I+ L+G +C G+T+ T+ + F + + E Sbjct: 112 GQDLLVRKDDNSINGPEDLNGKRLCSVTGSTSAATVKEKFASE---VQLMEQPGYAECAT 168 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 A + DA T D L L + + ++ ++ I +GDT+ ++ Sbjct: 169 ALFSGIVDAVTTDDIILAGLASASR--GKLKVVGKPFTQEYYGVGIKKGDTQLATKINNA 226 Query: 245 HYAMVT--AEELGITQKNINQVSKDTTNPDVQ 274 M+ + E I+ + PDV+ Sbjct: 227 IVDMIQDGSWENAIS----DNTKGTNYTPDVR 254 >gi|257459777|ref|ZP_05624886.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] gi|257443202|gb|EEV18336.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] Length = 267 Score = 166 bits (422), Expect = 3e-39, Method: Composition-based stats. Identities = 52/262 (19%), Positives = 105/262 (40%), Gaps = 18/262 (6%) Query: 11 CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70 L+ + A L I+ +G ++ G+ G F+E+ +G ++GF+V +A+++ Sbjct: 3 LLLAMLLPFIVAFADSLEQIRSKGVVRIGVYDGQPPFSELN-DGTFEGFEVTMAQAIAND 61 Query: 71 IFD-DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 +F +I+ +P+ ++R AL + ++DI+ T R + + G Sbjct: 62 LFGEKGGRIELVPMKVEDRIPALVNNRVDIVIATITITPERAQQIDF--STPYFSVNLGV 119 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 + K I S++ L I +++G T E +FK + + E + Sbjct: 120 LTRKADRIKSLADLREKRILLESGGTGEA----FFKQEGFG-NFTFCKIARECYRMLKDG 174 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 DAY D L A+ V L + + + +G+ E + V+ ++ Sbjct: 175 DVDAYATDN--LIAMAYPVVDSEVEVPLKTLGKPDFMGIGVQKGNKELLDFVN---AELI 229 Query: 250 TAEELGITQKNINQVSKDTTNP 271 + G +K + T NP Sbjct: 230 KLSKEGFFEK----AYEGTFNP 247 >gi|227893084|ref|ZP_04010889.1| glutamine-binding protein precursor [Lactobacillus ultunensis DSM 16047] gi|227865062|gb|EEJ72483.1| glutamine-binding protein precursor [Lactobacillus ultunensis DSM 16047] Length = 272 Score = 166 bits (422), Expect = 3e-39, Method: Composition-based stats. Identities = 46/263 (17%), Positives = 92/263 (34%), Gaps = 13/263 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDD 74 ++ +K+ + GI F G +GF+ D +AL+ I Sbjct: 21 SACGKPGKQNVYQKVKENNEIVWGIRADTRLFGLTNVKTGHIEGFETDLAKALTKQILGK 80 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 + ++ A R L++ +D + T R + + G ++ Sbjct: 81 KGRASFVTTTANTRIPLLKNGNVDAVLATMTITPERAKQVTF--TKPYFPAGSSLLVPNN 138 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I SV L+ ++ GTT D K + ++ + +A +AH+ Sbjct: 139 SKIKSVKDLNNKTVLAVKGTTAV----DDVHKSAPKARVLQYDDYGQAMSALKAHQGVTL 194 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 T D L + N + ++ + S +P A+ +G TE + ++ A+ EE Sbjct: 195 TTDNGLLAGIAQENPG---YKLVGGVYSDAPYGIAVNKGQTEMADHIN---EALKELEEN 248 Query: 255 GITQKNINQVSKDTTNPDVQRFL 277 G + I + ++ L Sbjct: 249 GTYNRLIKKWFAGIPGFSLKGVL 271 >gi|220913267|ref|YP_002488576.1| extracellular solute-binding protein family 3 [Arthrobacter chlorophenolicus A6] gi|219860145|gb|ACL40487.1| extracellular solute-binding protein family 3 [Arthrobacter chlorophenolicus A6] Length = 295 Score = 166 bits (422), Expect = 3e-39, Method: Composition-based stats. Identities = 44/262 (16%), Positives = 93/262 (35%), Gaps = 19/262 (7%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 + + + G +K G F +V +G GFDV+ + +++ + KI++ Sbjct: 46 AAGTTMEKLSSAGTIKIGTKFDQPLFGQVGLDGKPVGFDVEIGKLIAAKLGIAADKIEWS 105 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSV 140 + R ++ ++D++ R+ + A Y GQ +++K I Sbjct: 106 ETVSANREPFIEQGKVDLVIATYTINDKRKQVVSFA--GPYYEAGQALMVNKDNDSIKKP 163 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + G +C G+T T+ D + A + R + +A T D Sbjct: 164 EDVKGKKVCSVTGSTPAATIVDKYGA-----ELVPAATYSACLEPLRNKQVEAVTTDNVI 218 Query: 201 LYALKLTNDRPSEHVIL-PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L + P + + +K P + + D E+ +W + + E+ G +K Sbjct: 219 LAGF--VDKEPDAFKLASDETFTKEPYGIGLKKDDAEFR---NWINDQLEAFEKDGDYKK 273 Query: 260 NINQVSKDTTN-----PDVQRF 276 + P + R+ Sbjct: 274 AWEATAGSVIKTAPSLPTINRY 295 >gi|46190372|ref|ZP_00206441.1| COG0834: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Bifidobacterium longum DJO10A] gi|322691618|ref|YP_004221188.1| glutamate ABC transporter substrate-binding protein [Bifidobacterium longum subsp. longum JCM 1217] gi|320456474|dbj|BAJ67096.1| glutamate ABC transporter substrate binding component [Bifidobacterium longum subsp. longum JCM 1217] Length = 266 Score = 166 bits (422), Expect = 3e-39, Method: Composition-based stats. Identities = 50/272 (18%), Positives = 104/272 (38%), Gaps = 21/272 (7%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 ++ L + + + A + G ++ GI G K +G + GFDVD + Sbjct: 1 MIAALAAVACTMSLAACGAD------ETGKIRIGIKFDQPGLGF-KKSGTYVGFDVDVAK 53 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ + +I + +K+R +Q+ +D++ T R+ ++ A + Sbjct: 54 YVAKKLGYSEDQIIWKEAPSKQREAMIQNGDVDMILATYSITDERKKAVSFA--GPYFVA 111 Query: 126 GQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 GQ ++ K I+ L+G +C G+T+ T+ + F + + E Sbjct: 112 GQDLLVRKDDNSINGPEDLNGKRLCSVTGSTSAATVKEKFASE---VQLMEQPGYAECAT 168 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 A + DA T D L L + + ++ ++ I +GDT+ ++ Sbjct: 169 ALFSGIVDAVTTDDIILAGLASASR--GKLKVVGKPFTQEYYGVGIKKGDTQLATKINNA 226 Query: 245 HYAMVT--AEELGITQKNINQVSKDTTNPDVQ 274 M+ + E I+ + PDV+ Sbjct: 227 IVDMIQDGSWENAIS----DNTKGTNYTPDVR 254 >gi|331007193|ref|ZP_08330404.1| amino acid ABC transporter, periplasmic amino acid-binding protein [gamma proteobacterium IMCC1989] gi|330418988|gb|EGG93443.1| amino acid ABC transporter, periplasmic amino acid-binding protein [gamma proteobacterium IMCC1989] Length = 120 Score = 166 bits (421), Expect = 4e-39, Method: Composition-based stats. Identities = 55/123 (44%), Positives = 83/123 (67%), Gaps = 3/123 (2%) Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGI 279 +ISK PL P + QGD W+N+V W+ AM+ AE L + + + +K + +P+ +R LG Sbjct: 1 MISKEPLGPVVRQGDDAWFNVVRWSLMAMIEAEFLNVDSASADT-AKASGSPEQKRLLGA 59 Query: 280 DKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAP 339 + GE LGL++DW + I++ +GNY E F+RN+G+ S LKI RG NA W+KGG++Y+ Sbjct: 60 EG--GAGEKLGLSEDWAFNIVKQVGNYSESFERNVGSGSALKIARGLNAQWNKGGILYSS 117 Query: 340 PIR 342 PIR Sbjct: 118 PIR 120 >gi|302522778|ref|ZP_07275120.1| glutamate binding periplasmic protein [Streptomyces sp. SPB78] gi|302431673|gb|EFL03489.1| glutamate binding periplasmic protein [Streptomyces sp. SPB78] Length = 261 Score = 166 bits (421), Expect = 4e-39, Method: Composition-based stats. Identities = 49/251 (19%), Positives = 93/251 (37%), Gaps = 13/251 (5%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 +++ + RG L G E A+G + GFD++ + +++ + ++I + Sbjct: 9 DSATWRKARARGRLVVGAKEDQPYLGEKDPASGRYSGFDIEIAKMVAAGLGFPANRISFR 68 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSV 140 + + R +LQ+ QID R+ +G A Y GQG ++ K GI Sbjct: 69 TIASANRETSLQNGQIDYYVGTYTINDNRKKLVGFA--GPYYMAGQGLLVRKDEDGIKGP 126 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + L G +C AG+T + + + + ++ ++ DA T D S Sbjct: 127 ADLDGKRVCSAAGSTPYQRIQHDYPKAD----LVSYDTYSICVDNLLTYQVDAVTTDDSI 182 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L P E ++ S+ P + + D + A E G +K Sbjct: 183 LLGYAA--KVPEELKVVGKPFSEEPYGIGVPRKDNALRLAIDGILAAR---ERDGTWKKA 237 Query: 261 INQVSKDTTNP 271 + + P Sbjct: 238 YDATLGLSGVP 248 >gi|212716942|ref|ZP_03325070.1| hypothetical protein BIFCAT_01886 [Bifidobacterium catenulatum DSM 16992] gi|212660227|gb|EEB20802.1| hypothetical protein BIFCAT_01886 [Bifidobacterium catenulatum DSM 16992] Length = 279 Score = 166 bits (421), Expect = 4e-39, Method: Composition-based stats. Identities = 47/253 (18%), Positives = 90/253 (35%), Gaps = 15/253 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + ++ C F + A G ++ GI G K +G + GFD Sbjct: 10 MLRR-VIATFCACACVFAVSACGADDAD-----GKIRVGIKFDQPGLGF-KKSGTYVGFD 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + ++ + +I + +K+R LQ+ +D + T R+ + A Sbjct: 63 VDVAKYIAKKLGYSEDQIVWKEAPSKQREAMLQNGDVDFIVATYSITDERKKVVSFA--G 120 Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ ++ K I L+G +C G+T+ +T+ + F + Sbjct: 121 PYFVAGQDLLVRKDETSIKGPEDLNGKRLCSVTGSTSAVTVKEKFANE---VQLMEQPGY 177 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A + DA T D L L + ++ ++ I + DT+ Sbjct: 178 AECATALFSGIVDAVTTDDIILAGLASASR--GRLRVVGKPFTQEYYGVGIKKDDTQLAT 235 Query: 240 IVSWTHYAMVTAE 252 ++ M+ Sbjct: 236 RINNAIADMIQDG 248 >gi|291616413|ref|YP_003519155.1| FliY [Pantoea ananatis LMG 20103] gi|291151443|gb|ADD76027.1| FliY [Pantoea ananatis LMG 20103] Length = 280 Score = 166 bits (421), Expect = 4e-39, Method: Composition-based stats. Identities = 50/264 (18%), Positives = 104/264 (39%), Gaps = 25/264 (9%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 A L DI+KRG L+ + F V + +G+D+D + L+ + K+Q +P+ Sbjct: 42 ADQLQDIQKRGVLRVAVPQDFPPFGSVGTDLQPQGYDIDMAKYLAKQM---KLKLQLVPV 98 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 + R LQ+ ++D++ + RE + + +F G K + + L Sbjct: 99 TSANRVPYLQTDKVDLVISSMGKNPEREKVIDFSRAYAPFF--LGVFGPKGDHLKDAAAL 156 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 SG S+ V G ++ L++ +E +AY + + + A Sbjct: 157 SGKSVGVTRGAVEDMVLSEVAPK---DAQVKRYEDNNTTLSAYLSGQVQYVATGNLVVAA 213 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 + T P++ + ++ SP + + + + V+ E GI +N+ Sbjct: 214 I--TRQNPAKAPVAQFMLKDSPCYIGLKKDEPALKDKVNTLI-------EQGIKDGTLNK 264 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGE 287 +S++ +L +N+G Sbjct: 265 MSEE--------WLKAPLPANLGA 280 >gi|187927921|ref|YP_001898408.1| family 3 extracellular solute-binding protein [Ralstonia pickettii 12J] gi|187724811|gb|ACD25976.1| extracellular solute-binding protein family 3 [Ralstonia pickettii 12J] Length = 302 Score = 166 bits (421), Expect = 4e-39, Method: Composition-based stats. Identities = 49/257 (19%), Positives = 94/257 (36%), Gaps = 23/257 (8%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF------- 72 +++ +L I+ G ++ V F+ A+ G+ VD C Sbjct: 26 LASSTPVLDRIRDTGTVRVAYRESSVPFSFYDADKKPVGYAVDLC--------LRVVDKL 77 Query: 73 -----DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 K+QY+ + R A+ + D+ +T RE +AF Y G Sbjct: 78 RTDLKRPDLKVQYVLVTPSTRMPAIADGKADLECGSTTNN--RERREKVAFTIPHYIAGI 135 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 I+ GI L G ++ GTT+ L + + + + E A Sbjct: 136 RMIVKTSSGIRRWDDLRGKTVVTTKGTTSVAELRKMNDVRVLNMNFLEAKDHAESFAMVE 195 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 + DA+ D LY + P ++ ++ D+++ P A + + DTE+ +V Sbjct: 196 TGKADAFAMDDVLLYGFRANTKTPGDYAVVGDMLTVEPYAIMLSKDDTEFKRLVDRAMTN 255 Query: 248 MV-TAEELGITQKNINQ 263 ++ + + +K Q Sbjct: 256 IILDYDAEKLYKKWFQQ 272 >gi|213691606|ref|YP_002322192.1| extracellular solute-binding protein, family 3 [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213523067|gb|ACJ51814.1| extracellular solute-binding protein, family 3 [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 279 Score = 166 bits (421), Expect = 4e-39, Method: Composition-based stats. Identities = 50/272 (18%), Positives = 104/272 (38%), Gaps = 21/272 (7%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 ++ L + + + A + G ++ GI G K +G + GFDVD + Sbjct: 14 VIAALAAVACTMSLAACGAD------ETGKIRIGIKFDQPGLGF-KKSGTYVGFDVDVAK 66 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ + +I + +K+R +Q+ +D++ T R+ ++ A + Sbjct: 67 YIAKKLGYSEDQIIWKEAPSKQREAMIQNGDVDMILATYSITDERKKAVSFA--GPYFVA 124 Query: 126 GQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 GQ ++ K I+ L+G +C G+T+ T+ + F + + E Sbjct: 125 GQDLLVRKDDNSINGPEDLNGKRLCSVTGSTSAATVKEKFASE---VQLMEQPGYAECAT 181 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 A + DA T D L L + + ++ ++ I +GDT+ ++ Sbjct: 182 ALFSGIVDAVTTDDIILAGLASASR--GKLKVVGKPFTQEHYGVGIKKGDTQLATKINNA 239 Query: 245 HYAMVT--AEELGITQKNINQVSKDTTNPDVQ 274 M+ + E I+ + PDV+ Sbjct: 240 IVDMIQDGSWENAIS----DNTKGVDYTPDVR 267 >gi|306823262|ref|ZP_07456638.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Bifidobacterium dentium ATCC 27679] gi|309801896|ref|ZP_07696011.1| ABC transporter glutamine-binding protein GlnH [Bifidobacterium dentium JCVIHMP022] gi|304553894|gb|EFM41805.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Bifidobacterium dentium ATCC 27679] gi|308221452|gb|EFO77749.1| ABC transporter glutamine-binding protein GlnH [Bifidobacterium dentium JCVIHMP022] Length = 270 Score = 166 bits (421), Expect = 4e-39, Method: Composition-based stats. Identities = 52/275 (18%), Positives = 98/275 (35%), Gaps = 17/275 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + V+ LC F + A G ++ GI G K NG + GFD Sbjct: 1 MLRR-AVATLCACACVFAVSACGADDAD-----GKIRIGIKFDQPGLGF-KKNGTYVGFD 53 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + ++ + +I + +K+R LQ+ +D + T R+ + A Sbjct: 54 VDVAKYVAKKLGYSEDQIVWKEAPSKQREAMLQNGDVDFIVATYSITDERKKVVSFA--G 111 Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ ++ K I L+G +C G+T+ +T+ + F + + Sbjct: 112 PYFVAGQDLLVRKDETSIKGPEDLNGKRLCSVIGSTSAVTVKEKFASE---VQLMEQPGY 168 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A + DA T D L L ++ ++ I +GDT+ Sbjct: 169 AECATALFSGIVDAVTTDDIILAGLASAAR--GRLRVVGKPFTQEYYGVGIKKGDTQLAT 226 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 ++ M+ + + + P+ + Sbjct: 227 KINNDIADMIQDGSWK--RAISDNTKGTSYTPNAK 259 >gi|195973406|gb|ACG63349.1| allantoate transport periplasmic binding protein [Klebsiella oxytoca M5al] Length = 261 Score = 166 bits (421), Expect = 4e-39, Method: Composition-based stats. Identities = 46/262 (17%), Positives = 95/262 (36%), Gaps = 11/262 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K +++ L + A L DI+KRG ++ + V + +G+D+ Sbjct: 1 MKKLLIALAGAACLLTNLSAAKADQLQDIEKRGTIRIAVPQDFPPLGSVGTDLQPQGYDI 60 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D R L+ + K+Q +P+ + R LQ+ ++D++ + RE + + Sbjct: 61 DMARYLAKQM---KLKLQLVPVTSANRVPYLQTDKVDLVISSLGKNAEREKVIDFSRAYA 117 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 +F G K + + LSG S+ V G ++ L +E Sbjct: 118 PFF--LGVFGPKGAELKDPAALSGKSVGVTRGAVEDMVLTSVAPKEA---QIKRYEDNNT 172 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +AY + + + A+ N + + ++ SP + + + V Sbjct: 173 TLSAYLSGQVQYVATGNLVVAAISRQNADKA--PVPSFMLKDSPCFIGLKKNEPALKAKV 230 Query: 242 SWTHYAMVTAEEL-GITQKNIN 262 V L G+++K + Sbjct: 231 DALIEQGVKDGTLNGLSEKWLK 252 >gi|293605798|ref|ZP_06688171.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] gi|292815793|gb|EFF74901.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] Length = 273 Score = 166 bits (421), Expect = 5e-39, Method: Composition-based stats. Identities = 53/276 (19%), Positives = 100/276 (36%), Gaps = 13/276 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGF 59 M + + + + + A + DIK RG L CG F+ A G+ Sbjct: 1 MKRHTYFAACLGLATLALGAAAQADQVDDIKARGELICGTLGTSQPFSFQDGATRQLVGY 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD C+ ++ + KI Y L+ R L ++DIL+ N ++ R + + Sbjct: 61 DVDVCKLVADKLG---VKINYKLLSVAARVPELNEGRVDILAANLGYSPDRAEQIAFSHA 117 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y Q ++ K G+ ++ L+G I G+++E + I + Sbjct: 118 --YYVSPQKLLVRKDSGLDTIEALNGRRIGATKGSSSEREIKRILNKSQ----VIGYGDS 171 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 A + + DA L L L + + ++ + P + + + Sbjct: 172 SATYLALQQKKVDAQFASELVLVRLVLQSPPTAPVSVIAKSVFDEPWGLGVRKSEPRMLQ 231 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 V+ A+ AE G ++ TT ++R Sbjct: 232 TVN---QALDEAESSGAAATLFDKWFGPTTPYKLER 264 >gi|290963270|ref|YP_003494452.1| glutamine-binding protein precursor [Streptomyces scabiei 87.22] gi|260652796|emb|CBG75929.1| putative glutamine-binding protein precursor [Streptomyces scabiei 87.22] Length = 292 Score = 166 bits (421), Expect = 5e-39, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 93/251 (37%), Gaps = 18/251 (7%) Query: 2 YKDFFVSILCLIILFFT--------SFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KA 52 + ++ CL++ S S + + +RG GI F + Sbjct: 4 RRSVLAALTCLVLGSCGLPGEEGPGSRFPEGSTMARVAERGVFTVGIKFDHPLFGYKEPS 63 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G GFD + R ++ + I+++ + R L+ +DI+ + R Sbjct: 64 TGRITGFDAEIARMVAKDLTGSERNIRFIETMPRNREDFLRRGVVDIVVATYSISEERRK 123 Query: 113 SLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 + Y+ Q ++ +GI ++ L+G +C AG+T+ L + + Sbjct: 124 LVDF--TDPYYYSRQDVLVRSDERGIRDLADLAGRDVCTAAGSTSAQRL----RGEVSRA 177 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 ++ + E AA R DA + D S L L P ++ + P A + Sbjct: 178 RLVIVDTYSECMAALVDGRIDAISTDESILLGLMSRQ--PDTVRLVGKPFGREPYAIGVR 235 Query: 232 QGDTEWYNIVS 242 +GDT + ++ Sbjct: 236 RGDTGLRDYLN 246 >gi|87121142|ref|ZP_01077033.1| polar amino acid uptake family ABC transporter, periplasmic substrate-binding protein [Marinomonas sp. MED121] gi|86163634|gb|EAQ64908.1| polar amino acid uptake family ABC transporter, periplasmic substrate-binding protein [Marinomonas sp. MED121] Length = 267 Score = 166 bits (421), Expect = 5e-39, Method: Composition-based stats. Identities = 48/252 (19%), Positives = 96/252 (38%), Gaps = 10/252 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +S + + ++ F+S T+A L DIK +G L + + G+ G + Sbjct: 1 MKKITTISSILISLIGFSSV-THADDLADIKAKGTLVVAVKADYKPYGYRNDQGEIVGLE 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + ++ + ++ +P + R L ++D+L R + +A + Sbjct: 60 IDLAQNVAERLGVS---LELVPAQSSNRMQFLIDGKVDLLIATMSDKPERRELVYIADQA 116 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G I K +S L+G +C G F A + F E Sbjct: 117 -YYSSGSNIIAKKSSQYTSWGDLNGQKVCGIKGAFYNQETETTFGA-----TIVPFGSSE 170 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E AA + +C+A+ D S + ++ + I+ +P A+ G+ ++ Sbjct: 171 ESLAALKQGKCNAFVYDDSFIAGKLNDPQWSQDYEMPLPTINDNPWGLAVRLGEDNFHAF 230 Query: 241 VSWTHYAMVTAE 252 ++ T + Sbjct: 231 MNSTIIDWHKSG 242 >gi|257461100|ref|ZP_05626198.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] gi|257441474|gb|EEV16619.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] Length = 267 Score = 166 bits (420), Expect = 5e-39, Method: Composition-based stats. Identities = 62/264 (23%), Positives = 110/264 (41%), Gaps = 22/264 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L + L ++ L IK++G ++ GI+ F+ V +G + GF+ Sbjct: 1 MKKIILALMLAVCSLL-------SNTLTQIKEKGVIRIGIDGSSPPFS-VAKDGGYSGFE 52 Query: 61 VDFCRALSSAIFDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 + L IF D KIQY+ +R A+Q ++D+ T RE + Sbjct: 53 ILLIEGLVKEIFGDKGSKIQYVVTVGDDRIKAVQDNRVDLDIALISVTKEREKLVDF--S 110 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G + I VS L+G +I Q GTT + DYF Y+ + Sbjct: 111 DPYFSVNIGVLTRSDDNIRKVSDLNGKTILAQPGTT----VFDYFTKQG--YNVVPCASA 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E ++ + D Y D ++A + + + V + ++ S LA A+ +G+TE N Sbjct: 165 NECFNDLKSGKGDGYGDDNLLVFAYAVVDRKVE--VNIKNLGSTDFLAIAVQKGNTELLN 222 Query: 240 IVSWTHYAMVTAEELGITQKNINQ 263 V+ ++ + G K ++ Sbjct: 223 AVN---AGLIELSKKGFFTKIFDE 243 >gi|134299236|ref|YP_001112732.1| extracellular solute-binding protein [Desulfotomaculum reducens MI-1] gi|134051936|gb|ABO49907.1| amino acid ABC transporter substrate-binding protein, PAAT family [Desulfotomaculum reducens MI-1] Length = 277 Score = 166 bits (420), Expect = 5e-39, Method: Composition-based stats. Identities = 52/252 (20%), Positives = 97/252 (38%), Gaps = 14/252 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 + T + L IK++G + G++ + GFD+D ++ + KI Sbjct: 37 AKQTEKNTLDQIKEKGVIVAGLDDTFAPMGYRDESNKLVGFDIDMGEEMAKRLG---VKI 93 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGI 137 Q+ P +AL SK+ DI+ T R+ S+ DGQ ++ K G Sbjct: 94 QWQPTQWDGIIMALDSKRFDIILSGMTVTEERKKSINF--SVPYVGDGQIMVVKKGTTGF 151 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 ++ + L G + QAG++ E + K +++ E + R D Sbjct: 152 NTAADLKGKVVGTQAGSSGEEAV----KKVEGIKEVKLYKTYPEAFTDLQIGRIPVVVCD 207 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 + A + R + I+ + I+ PLA + + D E + M L T Sbjct: 208 R--ITASHYISKRADTYEIVGEKITDEPLAIGLRKSDPELKEAIDNVLNEMKKDGTL--T 263 Query: 258 QKNINQVSKDTT 269 + ++ ++D T Sbjct: 264 KISMKWFNRDIT 275 >gi|330951203|gb|EGH51463.1| extracellular solute-binding protein [Pseudomonas syringae Cit 7] Length = 261 Score = 166 bits (420), Expect = 5e-39, Method: Composition-based stats. Identities = 51/265 (19%), Positives = 95/265 (35%), Gaps = 12/265 (4%) Query: 1 MYKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + + L L + +A+ L D+ RG LK + F V + +G Sbjct: 1 MTKRYSALLTALFASLMLSQTPAHANGLDDVVARGTLKVAVPQDFPPFGSVGPDMKPRGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D + L+ + K++ P+N+ R L + ++D++ + RE + + Sbjct: 61 DIDTAQLLADKL---KVKLELTPVNSTNRIPFLTTGKVDLVISSLGKNPDREKVIDFSRA 117 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 ++ + ++ L G +I V G ++ L+ FE Sbjct: 118 YAPFY--LAVFGPPDSPVKDIADLKGKTISVTRGAIEDIELSKVAPE---GAVIKRFEDN 172 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AAY A + D + A+ + P L + SP+ + +G E Sbjct: 173 NSTIAAYLAGQTDLIASGNVVMVAI--SERNPKRIPALKVKLKDSPVYVGVNKGQPELLG 230 Query: 240 IVSWTHYAMVTAEEL-GITQKNINQ 263 V A L +QK + Q Sbjct: 231 RVDEILNAAKADGSLENASQKWLKQ 255 >gi|254387161|ref|ZP_05002431.1| sugar-binding protein [Streptomyces sp. Mg1] gi|194345976|gb|EDX26942.1| sugar-binding protein [Streptomyces sp. Mg1] Length = 330 Score = 166 bits (420), Expect = 5e-39, Method: Composition-based stats. Identities = 41/227 (18%), Positives = 82/227 (36%), Gaps = 10/227 (4%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 + + + I+ G L G++ + +G GFD+ +A++ I D SK+ Sbjct: 75 STVDGPTIERIRSAGKLVAGVDQNSFKWGYRNPDGHLDGFDIALVKAIAKDILGDESKVI 134 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 Y + +R ALQ+ ++D++ R R + + + GQ ++ K I+ Sbjct: 135 YRAIPTSQRIPALQAGRVDVVVRTMTINCKRLEDVAFSTA--YFEAGQQVLVPKGSTITG 192 Query: 140 VS-QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 L G IC AG+T E L + + P+ + + D D Sbjct: 193 YDASLKGRKICFAAGSTAEAALT----SRSYGSVPVTVPNQLDCLVRLQLGEVDGIITDN 248 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + + ++ +K A+ + T+ V+ Sbjct: 249 ALAAGQAAQDPS---VQLVGSPFTKEFYGVAMNKDATDLVRRVNKVL 292 >gi|299529975|ref|ZP_07043402.1| amino-acid ABC transporter bindingprotein ybeJ precursor [Comamonas testosteroni S44] gi|298721955|gb|EFI62885.1| amino-acid ABC transporter bindingprotein ybeJ precursor [Comamonas testosteroni S44] Length = 307 Score = 166 bits (420), Expect = 5e-39, Method: Composition-based stats. Identities = 46/250 (18%), Positives = 91/250 (36%), Gaps = 9/250 (3%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR----ALSSAIFDDPSKIQYL 81 L I+ G + G+ + NG + GF V+ C + + I+Y Sbjct: 24 TLDRIRDTGVVTMGVREASGTMSYTLGNGKYAGFHVELCEKALARMQQQLKLPRLDIRYQ 83 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 + A+ R + + +D+ T R+ + A P Y + + K GI+ V+ Sbjct: 84 MVTAQNRVPLVANGTVDVECGTTTNNAARQKEVAFA--PTVYMEEVRTAVRKNSGITEVA 141 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 QL G ++ G T L + K + ++ ++ + E R DA D L Sbjct: 142 QLKGRNVAATTGATAVTLLRRFSKEKGVDFNVLMAKDNAECFILLETGRADACVADGQIL 201 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 + P ++ I+ + S P+A + + E+ + M ++ E+ Sbjct: 202 ASGLSRLRDPGQYAIVGEPFSVEPIAIMLDRKSPEFKKLFDAQIRGMASSGEV---AALY 258 Query: 262 NQVSKDTTNP 271 ++ P Sbjct: 259 DKWFMKPVPP 268 >gi|152981681|ref|YP_001351726.1| ABC transporter substrate binding protein [Janthinobacterium sp. Marseille] gi|151281758|gb|ABR90168.1| ABC transporter substrate binding protein [Janthinobacterium sp. Marseille] Length = 259 Score = 166 bits (420), Expect = 5e-39, Method: Composition-based stats. Identities = 45/262 (17%), Positives = 101/262 (38%), Gaps = 12/262 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + L L T+ A L DI+K+G L+ + F V + +G D Sbjct: 1 MKLSTILIGLMAGALLLTNV-ARADALDDIQKKGVLRVAVPQDFPPFGSVTTDMTPQGLD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D ++ + K++ +P+ + R LQ+K++D++ + RE + + Sbjct: 60 IDVATLIAKKLG---VKVELIPVTSANRIPYLQTKKVDLVISSMGKNPEREKVIDFSAAY 116 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +F+G + +++ + L+G +I V G+ +L L+ +E Sbjct: 117 APFFNG--VFGPADQKVAAPADLAGKTIGVTRGSVEDLELSKIAPE---SATIKRYEDNN 171 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +++ +++ A+ P + +I SP + + +G+ + Sbjct: 172 GTISSFLSNQVQLVATGNVIAAAIIA--KNPPKKPETKFLIKNSPCSIGLNKGEEKLLEK 229 Query: 241 VSWTHYAMVTAEELG-ITQKNI 261 V+ L +T+K + Sbjct: 230 VNAIIAQAKKDGSLNTLTEKWL 251 >gi|291280399|ref|YP_003497234.1| amino acid ABC transporter substrate-binding protein [Deferribacter desulfuricans SSM1] gi|290755101|dbj|BAI81478.1| amino acid ABC transporter, substrate-binding protein [Deferribacter desulfuricans SSM1] Length = 269 Score = 166 bits (420), Expect = 6e-39, Method: Composition-based stats. Identities = 61/277 (22%), Positives = 101/277 (36%), Gaps = 22/277 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K F ++ L F + N+ S L I KRG L+ G+ +G F NG+ Sbjct: 1 MRKFFVSLLVFLFAATFLYAADNSLWEKSTLNQILKRGELRVGLESGYKPFEMTAKNGEI 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFDVD + ++ A+ K++ + AL + + DI+ T R + + Sbjct: 61 IGFDVDLAKVMAKAMG---VKLKIVNTAWDGIIPALITDKFDIIMSGMTITQKRNLQVNF 117 Query: 117 AFRPITYFDGQGFIMHKK--KGISSVSQLSGAS--ICVQAGTTTELTLADYFKAHNMKYH 172 A GQ ++HKK I S L+ I + GTT Y Sbjct: 118 AD--PYIIVGQTLLIHKKDAGKIKSYKDLNNPKYVIASKLGTTGYFAAKKYIPKA----K 171 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 FE + + + DA+ D+ V L + PL AI + Sbjct: 172 VNAFETEADAFQDFINGKADAFVYDLPLCAYYYSLYK--DRVVFLDKPFTFEPLGWAIKK 229 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 GD ++ +W + + + G + + K + Sbjct: 230 GDPDFL---NWLNNFLRQIKGDGTYDRIYKKWFKSKS 263 >gi|28872357|ref|NP_794976.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213971836|ref|ZP_03399938.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato T1] gi|301383373|ref|ZP_07231791.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato Max13] gi|302064066|ref|ZP_07255607.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato K40] gi|302134966|ref|ZP_07260956.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28855612|gb|AAO58671.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213923382|gb|EEB56975.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato T1] gi|331017859|gb|EGH97915.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 261 Score = 166 bits (420), Expect = 6e-39, Method: Composition-based stats. Identities = 52/274 (18%), Positives = 100/274 (36%), Gaps = 14/274 (5%) Query: 1 MYKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + + L L + +A+ L D+ RG LK + F V + +G Sbjct: 1 MTKRYSALLTALFASLMLSQTPAHANGLDDVVARGTLKVAVPQDFPPFGSVGPDMKPRGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D + L+ + K++ P+N+ R L + ++D++ + RE + + Sbjct: 61 DIDTAQLLADRL---KVKLELTPVNSTNRIPFLTTGKVDLVISSLGKNPDREKVIDFSRA 117 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 ++ + ++ L G +I V G ++ L+ FE Sbjct: 118 YAPFY--LAVFGPPDSPVKDIADLKGKTISVTRGAIEDIELSKVAPE---GATIKRFEDN 172 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AAY A + D + A+ + P L + SP+ + +G E + Sbjct: 173 NSTIAAYLAGQTDLIASGNVVMVAI--SERNPKRIPALKVKLKDSPVYVGLNKGQPELLS 230 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 V+ A A+ G +K K+ D+ Sbjct: 231 KVNEILNA---AKADGTLEKASVTWLKEPLPADL 261 >gi|320457693|dbj|BAJ68314.1| glutamate ABC transporter substrate binding component [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 266 Score = 166 bits (420), Expect = 6e-39, Method: Composition-based stats. Identities = 50/272 (18%), Positives = 104/272 (38%), Gaps = 21/272 (7%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 ++ L + + + A + G ++ GI G K +G + GFDVD + Sbjct: 1 MIAALAAVACTMSLAACGAD------ETGKIRIGIKFDQPGLGF-KKSGTYVGFDVDVAK 53 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ + +I + +K+R +Q+ +D++ T R+ ++ A + Sbjct: 54 YIAKKLGYSEDQIIWKEAPSKQREAMIQNGDVDMILATYSITDERKKAVSFA--GPYFVA 111 Query: 126 GQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 GQ ++ K I+ L+G +C G+T+ T+ + F + + E Sbjct: 112 GQDLLVRKDDNSINGPEDLNGKRLCSVTGSTSAATVKEKFASE---VQLMEQPGYAECAT 168 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 A + DA T D L L + + ++ ++ I +GDT+ ++ Sbjct: 169 ALFSGIVDAVTTDDIILAGLASASR--GKLKVVGKPFTQEHYGVGIKKGDTQLATKINNA 226 Query: 245 HYAMVT--AEELGITQKNINQVSKDTTNPDVQ 274 M+ + E I+ + PDV+ Sbjct: 227 IVDMIQDGSWENAIS----DNTKGVDYTPDVR 254 >gi|311694310|gb|ADP97183.1| ABC transporter periplasmic amino acid-binding protein [marine bacterium HP15] Length = 272 Score = 165 bits (419), Expect = 6e-39, Method: Composition-based stats. Identities = 62/290 (21%), Positives = 108/290 (37%), Gaps = 23/290 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + L TS S A L + +RG L CG+ N + GFD Sbjct: 1 MIRKL--APLVFACAAVTSVSATADQLDTVIQRGTLNCGVVLDFPPMGYFDENNEPAGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+C L A+ D + L L ER +L S + D++ +T TL R ++G Sbjct: 59 VDYCNDLGEALGVD---VNVLNLTWGERIPSLVSGKTDVVIGSTSDTLERAKTVGF--TY 113 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFERV 179 + I ++ K I S L + GTT E Y + K + F+ Sbjct: 114 PYFVFKFQVIANEDKNIESFDDLKNLKVGAALGTTYETEYLAYAEQQGWGKDNYTSFKSE 173 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + + DA + + A KL ++ ++ P + + + I + D Sbjct: 174 NDAYLGLYQGKVDAIISTNTNI-ATKLRSEEFADFEAGPYVPNYDDVVGIIAKRDE---- 228 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEAL 289 V+W +Y + + Q+ N + G D +++ ++L Sbjct: 229 -VAWINYLNLFL---------VRQIRDGNMNEAYNKHFGTDAPADLIKSL 268 >gi|51595216|ref|YP_069407.1| amino acid ABC transporter, periplasmic protein [Yersinia pseudotuberculosis IP 32953] gi|153950109|ref|YP_001402150.1| amino acid ABC transporter periplasmic protein [Yersinia pseudotuberculosis IP 31758] gi|170025546|ref|YP_001722051.1| extracellular solute-binding protein [Yersinia pseudotuberculosis YPIII] gi|186894233|ref|YP_001871345.1| extracellular solute-binding protein [Yersinia pseudotuberculosis PB1/+] gi|51588498|emb|CAH20106.1| putative amino acid ABC transporter, periplasmic protein [Yersinia pseudotuberculosis IP 32953] gi|152961604|gb|ABS49065.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia pseudotuberculosis IP 31758] gi|169752080|gb|ACA69598.1| extracellular solute-binding protein family 3 [Yersinia pseudotuberculosis YPIII] gi|186697259|gb|ACC87888.1| extracellular solute-binding protein family 3 [Yersinia pseudotuberculosis PB1/+] Length = 262 Score = 165 bits (419), Expect = 7e-39, Method: Composition-based stats. Identities = 47/262 (17%), Positives = 101/262 (38%), Gaps = 13/262 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K L +++ + + A L I++RG L+ + F V + +G+D+ Sbjct: 4 KKRMLW--LWAVLVLVQAPAVLADQLEKIQQRGVLRVAVPQDFPPFGSVGTDLQPQGYDI 61 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D + L+ + K+Q +P+ + R LQ+ ++D++ + RE ++ + Sbjct: 62 DMAQYLADKM---KLKLQLVPVTSANRVPYLQTDKVDLVISSLGKNPEREKAIAFSRAYA 118 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 +F G K + QL+G +I V G ++ L++ +E Sbjct: 119 PFF--LGVFGAKDDELKQPEQLAGKTIGVTRGAVEDMVLSEIAPKAA---QIRRYEDNNT 173 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +AY + + + + AL P + + ++ SP + QG+ V Sbjct: 174 TLSAYLSGQVNYLATGNLVISALARQ--NPKQAPVAKFMLKDSPCYIGLRQGEPALKAKV 231 Query: 242 SWTHYAMVTAEEL-GITQKNIN 262 + L G+++K + Sbjct: 232 DALIGDALQDNTLNGLSEKWLK 253 >gi|139439419|ref|ZP_01772860.1| Hypothetical protein COLAER_01880 [Collinsella aerofaciens ATCC 25986] gi|133775198|gb|EBA39018.1| Hypothetical protein COLAER_01880 [Collinsella aerofaciens ATCC 25986] Length = 291 Score = 165 bits (419), Expect = 7e-39, Method: Composition-based stats. Identities = 53/267 (19%), Positives = 98/267 (36%), Gaps = 31/267 (11%) Query: 3 KDFFVSILCLIILFFTSFS-------------TNASILGDIKKRGFLKCGINTGLVGFAE 49 + F+ + +L T + S L IK RG L G+ + G+ Sbjct: 13 RRRFLQLAGAGMLALTGTALTGCGNSTSGEGSDKGSKLAAIKSRGHLNAGVKKDVPGYGY 72 Query: 50 VK-ANGDWKGFDVDFCRALSSAIFDDPSK-------IQYLPLNAKERFLALQSKQIDILS 101 A G ++G +VD C +++A+F K +++ + K R + + Q+D+++ Sbjct: 73 YDTAKGRFEGMEVDLCYQIAAAVFGVSYKEARAQELVEFTDVTPKTRGPLIDNGQLDVVA 132 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 T R+ S D G ++ K+ G +S+ L G I V G TT+ + Sbjct: 133 ATYTITDERKKSWDF--STPYRTDYVGLMVKKRSGFTSIEDLDGKVIGVSQGATTQSLIE 190 Query: 162 DYFKAHNMKYHP--IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219 K + P F I ++ A D + D S L + ++ P+ Sbjct: 191 QMIKDNGFSCKPEFRAFSGYPIIKSSLDAGNIDVFAMDRSTLAGYM----NETVELLQPE 246 Query: 220 -IISKSPLAPAIIQGDTEWYNIVSWTH 245 + A +G + +V Sbjct: 247 VKFGEQGYGVATKKG-CDLSAVVDQVI 272 >gi|312876440|ref|ZP_07736424.1| extracellular solute-binding protein family 3 [Caldicellulosiruptor lactoaceticus 6A] gi|311796798|gb|EFR13143.1| extracellular solute-binding protein family 3 [Caldicellulosiruptor lactoaceticus 6A] Length = 266 Score = 165 bits (419), Expect = 7e-39, Method: Composition-based stats. Identities = 65/290 (22%), Positives = 110/290 (37%), Gaps = 31/290 (10%) Query: 1 MYKDF--FVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 MYK V ++ L I F + S N + L IKK G++ N + Sbjct: 1 MYKKAIALVLLIALFIPFLSGCSLNNQNMTTLEKIKKTKEFVVGMDNTFPPMEFTDDNNN 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFDVD ++ + +K++ + ++ AL+SK+ D + T R+ + Sbjct: 61 TVGFDVDLANEIAKKLG---AKLKIVAVDWSGIQSALKSKKFDAIISCFSITDERKKA-- 115 Query: 116 LAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + Q + K I S L G I VQA TT + + K N + Sbjct: 116 FNLAGPYLYIRQVIAVKKGDSSIKSFEDLKGIKIGVQANTTGDSAVQK-MKFINYEKDVT 174 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +ER+ + R A D Y K P + I P + + P+ A+ + D Sbjct: 175 RYERITDAFNDLNIGRIKAVVIDSVVAYYYKKQ--NPEKFDIAPAQLEREPVVIALRKED 232 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV-QRFLGIDKSS 283 + YN + QK ++Q+ KD T + +++ G D + Sbjct: 233 KDLYNEI----------------QKILDQLKKDGTIAKISEKWFGEDITK 266 >gi|242279193|ref|YP_002991322.1| extracellular solute-binding protein family 3 [Desulfovibrio salexigens DSM 2638] gi|242122087|gb|ACS79783.1| extracellular solute-binding protein family 3 [Desulfovibrio salexigens DSM 2638] Length = 271 Score = 165 bits (419), Expect = 7e-39, Method: Composition-based stats. Identities = 59/281 (20%), Positives = 110/281 (39%), Gaps = 28/281 (9%) Query: 2 YKDFFVSILCLIILFFTSFSTNAS-------ILGDIKKRGFLKCGINTGLVGFAEVKANG 54 K + ++ ++ L F + + A L I K G L+CGI +G + F G Sbjct: 1 MKRICMMLIMVLALGFAATANAADIDLAKKSTLNSILKSGELRCGIASGYIPFQMTDKKG 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNA--KERFLALQSKQIDILSRNTDWTLLREI 112 GF++D R ++ A+ ++++P+N AL + +IDI++ R + Sbjct: 61 RIVGFEIDLAREMAKAMG-----VKFVPVNMEFDGIIPALLTNKIDIITAGMTVNQERNL 115 Query: 113 SLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGA--SICVQAGTTTELTLADYFKAHN 168 + A GQ +++KK I S L+ +I + GTT E + Sbjct: 116 QINFAE--PFMVVGQTVLLNKKLEGKIKSYKDLNKPEYTIVSKLGTTGEQAAKRFIPKAK 173 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 K F+ + + DA D+ A+ + + V L + + PL Sbjct: 174 YK----SFDLETDAALEVLNGKADAMIYDLPF-NAIFMAEQGEGKLVFLDEPFTYEPLGW 228 Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 I +GD ++ N + + + G +K N+ + T Sbjct: 229 GISKGDPDFLNFLGNFLHQIKN---DGRYEKLYNKWFESTA 266 >gi|154487060|ref|ZP_02028467.1| hypothetical protein BIFADO_00898 [Bifidobacterium adolescentis L2-32] gi|154084923|gb|EDN83968.1| hypothetical protein BIFADO_00898 [Bifidobacterium adolescentis L2-32] Length = 280 Score = 165 bits (418), Expect = 8e-39, Method: Composition-based stats. Identities = 46/222 (20%), Positives = 87/222 (39%), Gaps = 9/222 (4%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 + G ++ GI G K NG + GFDVD + ++ + +I + +K+R Sbjct: 35 ETGKIRIGIKFDQPGLGF-KKNGTYVGFDVDVAKYVAKKLGYSEDEIVWKESPSKQREAM 93 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICV 150 LQ+ +D + + T R+ + A + GQ ++ K GI L+G +C Sbjct: 94 LQNGDVDYIVASYSITDERKKVVDFA--GPYFVAGQDLLVRKDETGIDGPKDLNGKRLCS 151 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 GTT+ + + + F + + E A + DA T D L L + Sbjct: 152 MTGTTSAVNVKEKFAKQT---QLMEQPGMAECATALLSGIVDAATTDDIILAGLASASR- 207 Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 ++ ++ + +G+TE N ++ M+ Sbjct: 208 -GRLRVVGKPFTQEYYGIGVKKGNTELKNKINNAITDMIQDG 248 >gi|298291224|ref|YP_003693163.1| extracellular solute-binding protein family 3 [Starkeya novella DSM 506] gi|296927735|gb|ADH88544.1| extracellular solute-binding protein family 3 [Starkeya novella DSM 506] Length = 270 Score = 165 bits (418), Expect = 8e-39, Method: Composition-based stats. Identities = 54/281 (19%), Positives = 104/281 (37%), Gaps = 22/281 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + +L ++ F + + + + IK+RG L G+ F +G G + Sbjct: 1 MRRSMIALLLAGVLAPFAAQAADG--VDAIKQRGTLIVGVKADYKPFGFRDPSGAVVGIE 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D ++ + K++ +P+ + R LQ ++D+L R + A P Sbjct: 59 PDLAADVAKRLG---VKLELVPVVSSNRIEFLQQGKVDMLIATMSDKPERRKVVQ-AIDP 114 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y D ++ KK G+ S+L G +C +G + A + F+ E Sbjct: 115 PYYSDFVNVLLPKKAGVKDWSELKGKPLCATSGAWYNKEI-----AQKYGVEIVAFDGSE 169 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A + C Y D + + L + ++ + + +P A+ G+ Sbjct: 170 KPLFALKQGNCVGYVYDQTFVQGKLLDAEWSGDYEMPLKGVLDAPWIMAVALGNDTLQKF 229 Query: 241 V-----SWTHYAMVTAEE--LGI----TQKNINQVSKDTTN 270 + W + AEE GI K +++ K TN Sbjct: 230 LEDTTKDWMKTGFIVAEEKKYGIEPTDYSKGMHEKMKSATN 270 >gi|295835696|ref|ZP_06822629.1| glutamate-binding protein [Streptomyces sp. SPB74] gi|295825636|gb|EDY45043.2| glutamate-binding protein [Streptomyces sp. SPB74] Length = 291 Score = 165 bits (418), Expect = 8e-39, Method: Composition-based stats. Identities = 49/251 (19%), Positives = 91/251 (36%), Gaps = 13/251 (5%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 ++ K RG L G E A+G + GFD++ + +++ + ++I + Sbjct: 39 ASATWRKAKARGRLVVGAKEDQPYLGEKDPASGRYTGFDIEIAKMVAAGLGFPANRISFR 98 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSV 140 + + R +LQ+ QID R+ +G A Y GQG + K GI Sbjct: 99 TIASANRETSLQNGQIDYYVGTYTINDNRKKLVGFA--GPYYLAGQGLLERKDEDGIKGP 156 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + L G +C AG+T + + + + ++ ++ DA T D S Sbjct: 157 ADLDGKRVCSAAGSTPYQRIQHDYPKAD----LVSYDTYSICVDNLLTYQVDAVTTDDSI 212 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L P E ++ S+ P + + D + + E G +K Sbjct: 213 LLGYAA--KVPEELKVVGKPFSEEPYGIGVPREDNALRLAIDGIL---ASGERDGTWKKA 267 Query: 261 INQVSKDTTNP 271 + + P Sbjct: 268 YDATLGLSGVP 278 >gi|225352764|ref|ZP_03743787.1| hypothetical protein BIFPSEUDO_04394 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225156371|gb|EEG69940.1| hypothetical protein BIFPSEUDO_04394 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 275 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 48/253 (18%), Positives = 92/253 (36%), Gaps = 15/253 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + ++ C F + A G ++ GI G K +G + GFD Sbjct: 6 MLRR-VIATFCACACVFAVSACGADDAD-----GKIRVGIKFDQPGLGF-KKSGTYVGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + ++ + +I + +K+R LQ+ +D + T R+ + A Sbjct: 59 VDVAKYIAKKLGYSEDQIVWKEAPSKQREAMLQNGDVDFIVATYSITDERKKVVSFA--G 116 Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ ++ K I+ L+G +C G+T+ +T+ + F + Sbjct: 117 PYFVAGQDLLVRKDETSINGPEDLNGKRLCSVTGSTSAVTVKEKFANE---VQLMEQPGY 173 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A + DA T D L L + ++ ++ I +GDT+ Sbjct: 174 AECATALFSGIVDAVTTDDIILAGLASASR--GRLRVVGKPFTQEYYGVGIKKGDTKLAT 231 Query: 240 IVSWTHYAMVTAE 252 ++ M+ Sbjct: 232 QINNAIADMIQDG 244 >gi|224008546|ref|XP_002293232.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220971358|gb|EED89693.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 277 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 67/301 (22%), Positives = 116/301 (38%), Gaps = 37/301 (12%) Query: 27 LGDIKKRGFLKCGI-NTGLVGF-AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 L +++R L+CGI GF + +GF+VD C+A+++A + +P Sbjct: 1 LEALQERKVLRCGIHKYDSRGFISFNNETNTREGFEVDLCKAVAAASLGSNFSYELVPTT 60 Query: 85 AKERFLALQSKQIDILSRNTDWTLLRE-----ISLGLAFRPITYFDGQGF-----IMHKK 134 RF L S + D+L +T T R+ +G +F + G + + Sbjct: 61 GLTRFADLASGEFDVLVASTTHTFDRDVHESSTGMGFSFSTPYLYGGMTYNGVPEFVKCA 120 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 +S+V +G IC GTT T + F A N ++ + E +C+ Sbjct: 121 DELSAVGDCAGILICSILGTTWYETTKELFPASN----IVLTKEQGESFQNLINGKCNVI 176 Query: 195 TGDISALYALKLT-NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 G+ + + + +K PLA GD E+ +V W ++ AE+ Sbjct: 177 QGEQYEAPEVVVRGFGYEGPYGQGKTSFTKDPLAMVTRDGDPEFAALVEWVLQTLILAEK 236 Query: 254 LGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRN 313 IT + ++ F G KD + +GNYGE++ R+ Sbjct: 237 QNITMMAADTFAESVE------FFG--------------KDMFQNALAAVGNYGEIYTRH 276 Query: 314 L 314 L Sbjct: 277 L 277 >gi|87303445|ref|ZP_01086233.1| extracellular solute-binding protein, family 3 [Synechococcus sp. WH 5701] gi|87282093|gb|EAQ74055.1| extracellular solute-binding protein, family 3 [Synechococcus sp. WH 5701] Length = 299 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 52/259 (20%), Positives = 100/259 (38%), Gaps = 15/259 (5%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPSKIQY 80 S+L + G L G + FA G G+ +D + I P K++ Sbjct: 25 GSLLQSVAASGVLVGGTSRDAFPFAYQNEEGQLVGYSIDMMNLIREEIERQTGRPIKLKL 84 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +PL+ +R +L+S ++++ + +T R+ + + G ++ + G+SS Sbjct: 85 VPLDTDQRLSSLESGAVNLVCDASSFTWSRDEKVDFSVS--YGITGTQLLVPRGSGLSSP 142 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L+G + V TT+ L +A A + ++ + +E A + R DA+ D Sbjct: 143 ESLAGKRVGVLPRTTSVLAVASRQPAAS----LVLLKDRQEGYEALQQGRIDAFADDGML 198 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA------EEL 254 LYA + + D S+ +A + Q ++ + +V + E Sbjct: 199 LYAWLQRQGGQAPFKVSADTYSREGIACMVPQNNSSFQRVVDLALIRYMQGFLRQQPRER 258 Query: 255 GITQKNINQVSKDTTNPDV 273 GI + K DV Sbjct: 259 GIFDRWFGPQGKTPLTQDV 277 >gi|331702185|ref|YP_004399144.1| ABC transporter periplasmic subunit [Lactobacillus buchneri NRRL B-30929] gi|329129528|gb|AEB74081.1| ABC-type transporter, periplasmic subunit family 3 [Lactobacillus buchneri NRRL B-30929] Length = 276 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 42/246 (17%), Positives = 94/246 (38%), Gaps = 15/246 (6%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 ++L D K+ + G+ F + + KGF++D +A++ I K +++ Sbjct: 30 QKNVLKDDKQTKTITWGVKADTKLFGLMDVRDNQIKGFEIDLAKAMTKQILGKDGKARFI 89 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 + ++ R L++ ID + T R + + + GQ ++ I +V Sbjct: 90 QVTSQTRMPLLRNGNIDAIMATMTITPERAKQVDFSRS--YFDAGQAILVKNGSPIKNVK 147 Query: 142 QL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L GA + G+ + + + + + A ++ + DA T D Sbjct: 148 DLNHKGAIVLGVVGSNSVQNIKKFAPKA----RVLQLSDYSQALTALKSGQGDALTTDNG 203 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 LY + + N + ++ +K P A+ +G + + ++ A+ E G K Sbjct: 204 ILYGMSIENPG---YSVVGGTFTKEPYGIAVDKGQGQMRDAMN---NALTKVENSGQYNK 257 Query: 260 NINQVS 265 + + Sbjct: 258 LLYKWF 263 >gi|302186816|ref|ZP_07263489.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. syringae 642] Length = 261 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 52/274 (18%), Positives = 97/274 (35%), Gaps = 14/274 (5%) Query: 1 MYKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + + L L + +A+ L D+ RG LK + F V + +G Sbjct: 1 MTKRYSALLTALFASLMLSQTPAHANGLDDVVARGTLKVAVPQDFPPFGSVGPDMKPRGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D + L+ + K++ P+N+ R L + ++D++ + RE + + Sbjct: 61 DIDTAQLLADRL---KVKLELTPVNSTNRIPFLTTGKVDLVISSLGKNPDREKVIDFSRA 117 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 ++ + ++ L G +I V G ++ L+ FE Sbjct: 118 YAPFY--LAVFGPPDSPVKDIADLKGKTISVTRGAIEDIELSKVAPE---GAVIKRFEDN 172 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AAY A + D + A+ + P L + SP+ + +G E Sbjct: 173 NSTIAAYLAGQTDLIASGNVVMVAI--SERNPKRIPALKVKLKDSPVYVGVNKGQPELLG 230 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 V A A+ G +K K D+ Sbjct: 231 KVDEILNA---AKADGTLEKASQTWLKQPLPADL 261 >gi|262204220|ref|YP_003275428.1| extracellular solute-binding protein family 3 protein [Gordonia bronchialis DSM 43247] gi|262087567|gb|ACY23535.1| extracellular solute-binding protein family 3 [Gordonia bronchialis DSM 43247] Length = 340 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 46/222 (20%), Positives = 88/222 (39%), Gaps = 10/222 (4%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + + DI G L G++ G F+ GD +GFDVD R ++ AIF DP ++++ L Sbjct: 95 TTMADIVAHGRLIVGLDIGSNLFSFRDPMTGDIRGFDVDLSREITRAIFGDPGRVEFRVL 154 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 ++ ER AL++ +D++ + T R + Y Q + + I+ +QL Sbjct: 155 SSAERVEALRTGAVDVVVKTMSITCDRLRDISF--SAPYYVASQRILAVQNSAITGPAQL 212 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 +G +C G T+ + M + + + + DA T D + L Sbjct: 213 AGKRVCSARGATSIGRIQSIAPQARM----VTTTTWADCLVLLQQGQVDAVTTDDAILAG 268 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 L + ++ + + I G + ++ Sbjct: 269 LAEQDPW---VRVVGPSLGEEYYGVGIPPGRDDMVRFINGVL 307 >gi|330900038|gb|EGH31457.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. japonica str. M301072PT] gi|330977255|gb|EGH77211.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 261 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 48/261 (18%), Positives = 91/261 (34%), Gaps = 11/261 (4%) Query: 1 MYKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + + L L + +A+ L D+ RG LK + F V + +G Sbjct: 1 MTKRYSALLTALFASLMLSQTPAHANGLDDVVARGTLKVAVPQDFPPFGSVGPDMKPRGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D + L+ + K++ P+N+ R L + ++D++ + RE + + Sbjct: 61 DIDTAQLLADKL---KVKLELTPVNSTNRIPFLTTGKVDLVISSLGKNPDREKVIDFSRA 117 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 ++ + ++ L G +I V G ++ L+ FE Sbjct: 118 YAPFY--LAVFGPPDSPVKDIADLKGKTISVTRGAIEDIELSKVAPE---GAVIKRFEDN 172 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AAY A + D + A+ + P L + SP+ + +G E Sbjct: 173 NSTIAAYLAGQTDLIASGNVVMVAI--SERNPKRIPALKVKLKDSPVYVGVNKGQPELLG 230 Query: 240 IVSWTHYAMVTAEELGITQKN 260 V A L + Sbjct: 231 KVDEILNAAKADGSLEKASQT 251 >gi|172037363|ref|YP_001803864.1| solute-binding family protein 3 [Cyanothece sp. ATCC 51142] gi|171698817|gb|ACB51798.1| putative extracellular solute-binding protein, family 3 [Cyanothece sp. ATCC 51142] Length = 276 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 59/268 (22%), Positives = 98/268 (36%), Gaps = 19/268 (7%) Query: 1 MY-KDFFVSILCLIILF-FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K + ++ LI F SF+ ++L IK+ G L G+ + F V G W G Sbjct: 1 MKNKSLILVLITLIFCSIFPSFALAETVLEKIKRTGELNAGVRKDAIPFGYVNQRGKWTG 60 Query: 59 FDVDFCRALSSAIFDDPS---KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + VD + + D + K+ RF +Q +DI+ T T R S Sbjct: 61 YSVDLIHLIHKRLEKDLNQSIKLNLREATIDSRFRIVQRGDVDIMCGATTITQTR--SKR 118 Query: 116 LAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F + G F++ L+ I GTTT+ + + + N K Sbjct: 119 VDFSVPFFMTGAQFLVKLEDAPNFDYNGSLNNIPIAFLPGTTTQEIIPQIYPSANWK--- 175 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN-DRPSEHVILP-DIISKSPLAPAII 231 + EE + A D L + + + V+LP I++ + Sbjct: 176 -NIKNREEGVRKLKRDEVKAVVSDGILLLGEIVQQGNNIEDFVLLPSQPITRELYGCILP 234 Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQK 259 Q + +W V+ T + E I QK Sbjct: 235 QKNPQWKQFVNVTILSP----ENRILQK 258 >gi|119025598|ref|YP_909443.1| glutamate-binding protein of ABC transporter system [Bifidobacterium adolescentis ATCC 15703] gi|118765182|dbj|BAF39361.1| glutamate-binding protein of ABC transporter system [Bifidobacterium adolescentis ATCC 15703] Length = 270 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 46/222 (20%), Positives = 87/222 (39%), Gaps = 9/222 (4%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 + G ++ GI G K NG + GFDVD + ++ + +I + +K+R Sbjct: 25 ETGKIRIGIKFDQPGLGF-KKNGTYVGFDVDVAKYVAKKLGYSEDEIVWKESPSKQREAM 83 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICV 150 LQ+ +D + + T R+ + A + GQ ++ K GI L+G +C Sbjct: 84 LQNGDVDYIVASYSITDERKKVVDFA--GPYFVAGQDLLVRKDETGIDGPKDLNGKRLCS 141 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 GTT+ + + + F + + E A + DA T D L L + Sbjct: 142 MTGTTSAVNVKEKFAKQT---QLMEQPGMAECATALLSGIVDAATTDDIILAGLASASR- 197 Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 ++ ++ + +G+TE N ++ M+ Sbjct: 198 -GRLRVVGKPFTQEYYGIGVKKGNTELKNKINNAITDMIQDG 238 >gi|121610413|ref|YP_998220.1| extracellular solute-binding protein [Verminephrobacter eiseniae EF01-2] gi|121555053|gb|ABM59202.1| extracellular solute-binding protein, family 3 [Verminephrobacter eiseniae EF01-2] Length = 274 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 45/258 (17%), Positives = 94/258 (36%), Gaps = 18/258 (6%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEV--KANGDWKGFDVDFCRALSSAIFDDPSK 77 + +A + IK RG L CG+ + V F+ + G+D+D C A++ + P Sbjct: 22 GTASADEIDTIKARGTLICGVGSNTVPFSYIEDPQTRKNVGYDIDLCEAVAKTLGVKP-- 79 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 + + R +Q ++D+ + T R+ + + G I + + Sbjct: 80 -ELKFVTTATRIPEVQQGRVDLALASVTITPERQELISFSH--PHLVTGTAIITPASRPM 136 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 ++S + + V G T ++ PI F A + A D Sbjct: 137 KALSDMENKRVSVIEGGLTGPAVSQKIPGA----KPIGFVTPATAFLALEQGKVQAMAAD 192 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 + L L + P ++ + + + L + + + V+ T M+ E+ G Sbjct: 193 ETTLLGLMRS--TPGKYAMFNEYLVLEKLGIGVHKERPKLLAAVNQT---MLDMEKSGQA 247 Query: 258 QKNINQVSKDTTNPDVQR 275 Q + ++ N ++R Sbjct: 248 QVSYDRWFG--ANSPLKR 263 >gi|258405418|ref|YP_003198160.1| extracellular solute-binding protein family 3 [Desulfohalobium retbaense DSM 5692] gi|257797645|gb|ACV68582.1| extracellular solute-binding protein family 3 [Desulfohalobium retbaense DSM 5692] Length = 263 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 62/273 (22%), Positives = 98/273 (35%), Gaps = 15/273 (5%) Query: 1 MYKD-FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K FVS L + + T F+ + S ++K+G L G++ K +G GF Sbjct: 1 MKKAILFVSALLCLCVAATGFAGDGS-WERVQKKGELVIGLDDTFAPMGFRKDDGTLVGF 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD AL + D I + P +L +K+ D + T R + Sbjct: 60 DVDAAEALGERLGID---IAWQPTAWDGVIHSLNAKKFDCIWNGMTITEERAAKVDFTE- 115 Query: 120 PITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 DGQ ++ + ++ + L G ++ VQ G++ + D KA + Sbjct: 116 -PYIMDGQIVVVQFENDAVTDFADLGGTTVGVQKGSSAVEAVEDLPKA---PETVKEYPS 171 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 A R A D + RP +LP ++K P A + D Sbjct: 172 NNNALLDLEAGRLAAVIVDN--VAGRYAIATRPGTFKVLPGFVTKEPFGIAFRKADDSLR 229 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 V AMV L + +D TNP Sbjct: 230 MKVQQALDAMVEDGTLAEISR--KWFGEDITNP 260 >gi|330501280|ref|YP_004378149.1| extracellular solute-binding protein [Pseudomonas mendocina NK-01] gi|328915566|gb|AEB56397.1| extracellular solute-binding protein [Pseudomonas mendocina NK-01] Length = 261 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 50/266 (18%), Positives = 100/266 (37%), Gaps = 14/266 (5%) Query: 1 MYK--DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K + L L F + + +A L DI K G LK + F V + +G Sbjct: 1 MRKFHRTLLGTL-FAALAFGASTAHADALEDISKAGVLKVAVPQDFPPFGSVGPDMKPRG 59 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 D+D + L+ + K++ P+N+ R L + ++D++ + RE + + Sbjct: 60 LDIDTAQLLADKL---AVKLELTPVNSTNRIPFLTTGKVDLVISSLGKNPEREAVIDFSA 116 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 ++ G I+S+ L+G +I V G+ ++ L++ FE Sbjct: 117 AYAPFY--LGVFGPDDAAIASLDDLAGKTISVTRGSIEDIELSNVAPK---GATIKRFED 171 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 AAY + + + + A+ + P + + SP+ + + Sbjct: 172 NNSTIAAYLSGQVELIASGNVVMVAI--SEKNPKRVPSMKLKLKDSPVYVGVNKNQAALL 229 Query: 239 NIVSWTHYAMVTAEEL-GITQKNINQ 263 + V+ L ++QK + Q Sbjct: 230 DKVNAIIADAKADGSLDALSQKWLKQ 255 >gi|254389483|ref|ZP_05004710.1| glutamate binding periplasmic protein [Streptomyces clavuligerus ATCC 27064] gi|294815860|ref|ZP_06774503.1| Putative glutamate ABC transporter substrate-binding protein [Streptomyces clavuligerus ATCC 27064] gi|326444202|ref|ZP_08218936.1| putative glutamate ABC transporter substrate-binding protein [Streptomyces clavuligerus ATCC 27064] gi|197703197|gb|EDY49009.1| glutamate binding periplasmic protein [Streptomyces clavuligerus ATCC 27064] gi|294328459|gb|EFG10102.1| Putative glutamate ABC transporter substrate-binding protein [Streptomyces clavuligerus ATCC 27064] Length = 301 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 49/251 (19%), Positives = 92/251 (36%), Gaps = 13/251 (5%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 ++ + RG G E A G + GFD++ R +S+++ DP++I ++ Sbjct: 49 SSPTWRKAEARGHFVVGAKEDQPYLGEKDPATGLYSGFDIEIARMVSASLGLDPARISFV 108 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSV 140 + + R ALQ+ QID R+ +G A Y GQ ++ K I Sbjct: 109 TIASANRETALQNGQIDYYVGTYTINDNRKKLVGFA--GPYYMAGQDLLVRKDETDIKGP 166 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L+G +C G+T + + + ++ ++ DA T D + Sbjct: 167 EDLAGKRVCSATGSTPYQRIKQDYPQA----VLVSYDTYSICVDNLLTYQVDAVTTDDAI 222 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L P E ++ S+ P + + D + A+ E+ G +K Sbjct: 223 LTGYAAKA--PDELKVVGKPFSQEPYGIGVPRSDNALRFAIDD---ALAENEKNGNWKKA 277 Query: 261 INQVSKDTTNP 271 + + P Sbjct: 278 YDATLGLSGVP 288 >gi|313891662|ref|ZP_07825269.1| ABC transporter, substrate-binding protein, family 3 [Dialister microaerophilus UPII 345-E] gi|313119940|gb|EFR43125.1| ABC transporter, substrate-binding protein, family 3 [Dialister microaerophilus UPII 345-E] Length = 265 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 54/252 (21%), Positives = 95/252 (37%), Gaps = 11/252 (4%) Query: 13 IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72 ++ S S KK + G++ NG+ GFDVD +A+S I Sbjct: 20 LVAGCGSDSAKNDSTQKPKK---IIAGLDDTFAPMGFRDENGNIVGFDVDIAKAVSKEIG 76 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 + I++ P++ + L S +ID + T RE + + Q +++ Sbjct: 77 VE---IEFKPIDWASKESELNSGRIDCIWNGLSITPEREEKMDF--TNPYMNNDQIYVVM 131 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 I S S L G IC Q G+T +L L + + A+R D Sbjct: 132 DNSDIKSASDLKGKRICFQEGSTVDLALNKNMDLRHSFGEIKTYPDFTSCFLDLDANRAD 191 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 A D + P ++ LP+ +S P A + +G+ E +++ + + Sbjct: 192 AVLVDGILADYYMTKS--PDKYRRLPEKLSTEPFAIGVKKGNEEIVKMLNEGIEEVKASG 249 Query: 253 E-LGITQKNINQ 263 E I+QK + Sbjct: 250 EAAKISQKWFQR 261 >gi|327392853|dbj|BAK10275.1| cystine-binding periplasmic protein precursor FliY [Pantoea ananatis AJ13355] Length = 261 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 50/264 (18%), Positives = 104/264 (39%), Gaps = 25/264 (9%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 A L DI+KRG L+ + F V + +G+D+D + L+ + K+Q +P+ Sbjct: 23 ADQLQDIQKRGVLRVAVPQDFPPFGSVGTDLQPQGYDIDMAKYLAKQM---KLKLQLVPV 79 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 + R LQ+ ++D++ + RE + + +F G K + + L Sbjct: 80 TSANRVPYLQTDKVDLVISSMGKNPEREKVIDFSRAYAPFF--LGVFGPKGDHLKDAAAL 137 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 SG S+ V G ++ L++ +E +AY + + + A Sbjct: 138 SGKSVGVTRGAVEDMVLSEVAPK---DAQVKRYEDNNTTLSAYLSGQVQYVATGNLVVAA 194 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 + T P++ + ++ SP + + + + V+ E GI +N+ Sbjct: 195 I--TRQNPAKAPVAQFMLKDSPCYIGLKKDEPALKDKVNTLI-------EQGIKDGTLNK 245 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGE 287 +S++ +L +N+G Sbjct: 246 MSEE--------WLKAPLPANLGA 261 >gi|307329669|ref|ZP_07608827.1| extracellular solute-binding protein family 3 [Streptomyces violaceusniger Tu 4113] gi|306884727|gb|EFN15755.1| extracellular solute-binding protein family 3 [Streptomyces violaceusniger Tu 4113] Length = 307 Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 52/241 (21%), Positives = 91/241 (37%), Gaps = 13/241 (5%) Query: 33 RGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 RG L G+ E A G + GFD++ R +S+++ P I++ + + R A Sbjct: 65 RGHLTVGVKEDQPYLGERDPATGRYSGFDIEIARMMSASLGFAPKTIRFQTIASANRETA 124 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICV 150 LQS QID LR+ +G A + GQ ++ + I + L+G ++C Sbjct: 125 LQSGQIDYYVGTYTINPLRKRLVGFA--GPYFMAGQSLLVRTDENDIHGPADLAGRTVCS 182 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 AG+T + + H + ++ + + DA T D + L Sbjct: 183 VAGSTPLQRIQTDYPKA----HAVAYDTYSVCVDNLLSFQVDAVTTDNTILLGYAAKA-- 236 Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 P E ++ SK P + + D + A+ E G +K + Sbjct: 237 PEELKVVGRPFSKEPYGIGVPKRDNALRFALDD---AIQVHERNGDWKKAYEATLGLSGV 293 Query: 271 P 271 P Sbjct: 294 P 294 >gi|300868858|ref|ZP_07113464.1| putative amino acid ABC transporter,substrate-binding protein [Oscillatoria sp. PCC 6506] gi|300333075|emb|CBN58656.1| putative amino acid ABC transporter,substrate-binding protein [Oscillatoria sp. PCC 6506] Length = 285 Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 44/232 (18%), Positives = 91/232 (39%), Gaps = 10/232 (4%) Query: 11 CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70 + S + S L I G ++ + F V + +G+D+D + L+ + Sbjct: 35 AVAAAPSQSTAPGTSTLDKIISAGKVRIAVPQDSPPFGSVGTDMQPQGYDIDVAKMLAES 94 Query: 71 IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130 + K++ +P+ + R LQS ++D++ + T R S+ + ++ G Sbjct: 95 L---EVKLELVPVTSTNRIPYLQSDRVDLVISSLGATPERAKSIYFSIAYAPFYSG--IY 149 Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190 SS + LSG ++ V G+ ++ LA FE +A A + Sbjct: 150 GFPGINASSYTDLSGKTVGVTQGSLEDIELAKRAPK---DIQIKRFEDNSTTASALLAGQ 206 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + + A K++ D P + + ++ SP + +GD + V+ Sbjct: 207 IELMATGNTI--ANKISKDNPDKKIENKFVMKNSPCYIGVRRGDLDLLQWVN 256 >gi|270284246|ref|ZP_05965800.2| glutamate-binding protein [Bifidobacterium gallicum DSM 20093] gi|270277400|gb|EFA23254.1| glutamate-binding protein [Bifidobacterium gallicum DSM 20093] Length = 286 Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 50/236 (21%), Positives = 97/236 (41%), Gaps = 12/236 (5%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 G ++ GI G K +G ++GFDVD R +++++ + I + K+R LQ Sbjct: 45 GKIRIGIKFDQPGLGF-KKSGTYEGFDVDVARYIANSLGYSDADIVWKEAPPKQREAMLQ 103 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQA 152 + +D++ T R+ ++ A + GQ ++ I L+G +C Sbjct: 104 NGDVDMILATYSITDARKQAVSFA--GPYFVAGQDLMVRADDDSIKGPQDLNGKRLCSVT 161 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 G+T+ +T+ + F + + E A + DA T D L L + Sbjct: 162 GSTSAVTVKEKFASE---VQLMEQPSYAECATALFSGIVDAVTTDDIILAGLAANSR--G 216 Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 + ++ ++ I +GDTE ++ M+ E G Q+ ++ +K T Sbjct: 217 KLKVVGQPFTEEYYGVGIKKGDTELATKINAAITEMI---EDGSWQRALDANTKGT 269 >gi|87122495|ref|ZP_01078375.1| putative amino acid ABC transporter, periplasmic protein [Marinomonas sp. MED121] gi|86162288|gb|EAQ63573.1| putative amino acid ABC transporter, periplasmic protein [Marinomonas sp. MED121] Length = 263 Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 48/256 (18%), Positives = 101/256 (39%), Gaps = 11/256 (4%) Query: 1 MYKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M + VS +II F+ F+ A +L DI+ R ++ + F + + +G Sbjct: 1 MKRFIKLVSKAMIIIAGFSVFNATADVLQDIQGRKLIRIAVPQDFPPFGSIGTDLKPQGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD ++ + KI+ +P+ + R LQ+K++D++ + RE ++ + Sbjct: 61 DVDMANYIADEMG---VKIEIVPVTSANRIPYLQTKKVDLVISSLGKNPEREKAIDFSTP 117 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +F G K ++ + L+G + V G+ +L L + + FE Sbjct: 118 YAPFF--LGVFGSKDVEVTKIEDLAGKIVGVTRGSVEDLELEKHAPK---SVNVRRFEDN 172 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AY + + + L A ++ +P ++ SP + +G+ Sbjct: 173 NTTLTAYLSGQVNLIATGN--LVATEIAKRQPQRAPESKFMLKDSPCYIGMAEGEVALQA 230 Query: 240 IVSWTHYAMVTAEELG 255 V+ + + +L Sbjct: 231 KVNELINKALASGKLN 246 >gi|242280218|ref|YP_002992347.1| extracellular solute-binding protein family 3 [Desulfovibrio salexigens DSM 2638] gi|242123112|gb|ACS80808.1| extracellular solute-binding protein family 3 [Desulfovibrio salexigens DSM 2638] Length = 262 Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 55/271 (20%), Positives = 95/271 (35%), Gaps = 13/271 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K V ++ +++ F T+ L ++K G L G++ + +G GFDV Sbjct: 1 MKRVLVLMVAMMLAFATTAMAGDGSLEKVQKAGKLVIGLDDTFAPMGFRQDDGTLVGFDV 60 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D + + KI++ P +L +K+ D + T RE ++ Sbjct: 61 DAAEEVGKRLG---IKIEWQPTAWSGVIHSLNAKKFDCIWNGMTITPEREKAVSF--SKP 115 Query: 122 TYFDGQ-GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 DGQ I K I + L G + VQ G+ A ++ Sbjct: 116 YIMDGQIAVIAMGNKSIKAHKDLGGKVVGVQKGSPALEAAKSLKPA---PKEIREYDTNV 172 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + + R + D + RP +++ LP I+ A QG+ Sbjct: 173 KALLDLESGRLNGVVVDN--IAGRYSMAQRPGKYLALPGYITSEAFGIAFRQGEDSLRAA 230 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 V T AM+ +G + +D TNP Sbjct: 231 VQKTIDAMIADGTMGKISR--KWFGEDVTNP 259 >gi|77461680|ref|YP_351187.1| extracellular solute-binding protein [Pseudomonas fluorescens Pf0-1] gi|77385683|gb|ABA77196.1| amino acid ABC transporter substrate-binding protein, PAAT family [Pseudomonas fluorescens Pf0-1] Length = 261 Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 49/256 (19%), Positives = 93/256 (36%), Gaps = 13/256 (5%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 + +A L D+ KRG LK + F V + +G D+D + L+ + K Sbjct: 19 SQAPAHADGLDDVVKRGTLKVAVPQDFPPFGSVGPDMKPRGLDIDTAKLLAEQL---KVK 75 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++ P+N+ R L + ++D++ + RE + + ++ + Sbjct: 76 LELTPVNSTNRIPFLTTGKVDLVISSLGKNPEREKVIDFSRAYAPFY--LAVFGPPDAAV 133 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 S++ L G +I V G ++ L FE AAY A + D Sbjct: 134 STLDDLKGKTISVTRGAIEDIELTKVAPE---GVTIKRFEDNNSTIAAYLAGQVDLIASG 190 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 + A+ + P L + SP+ + + + V+ TA+ G Sbjct: 191 NVVMVAI--SEKNPKRVPALKVKLKDSPVYVGVNKNEPALLGKVNEILT---TAKADGAL 245 Query: 258 QKNINQVSKDTTNPDV 273 +KN K+ D+ Sbjct: 246 EKNAQTWLKEPLPADL 261 >gi|296269107|ref|YP_003651739.1| extracellular solute-binding protein family 3 [Thermobispora bispora DSM 43833] gi|296091894|gb|ADG87846.1| extracellular solute-binding protein family 3 [Thermobispora bispora DSM 43833] Length = 289 Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats. Identities = 49/275 (17%), Positives = 89/275 (32%), Gaps = 8/275 (2%) Query: 6 FVSILCLIILFFTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 V++ L + A + K L GI G K +G + GFDVD Sbjct: 19 LVTLAALATSLTACGQSKADSIVDKAKNEKKLTIGIKIDQPGLGLRKPDGTYAGFDVDVA 78 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 R ++ + S I + + R +Q Q+D++ T R+ + A Sbjct: 79 RYIAKELGVPESGITFKEAQSANREPFIQQGQVDMVIATYSITDERKEKVSFA--GPYLV 136 Query: 125 DGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 GQ ++ I+ V L +C G+ + LAD F + + Sbjct: 137 TGQDILIRADDDSITDVQSLKDKKVCGAQGSISPKRLADMFGPEWEAKNLTQQQGYGACL 196 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 + DA + D + L P + ++ S + + D + ++ Sbjct: 197 PLLENKQVDAISTDATILAGFAAQF--PGKFKLVGKPFSTEKYGIGLKKDDKAGRDAINN 254 Query: 244 THYAMVTAEEL-GITQKNINQVSKD-TTNPDVQRF 276 M N + K T P ++R+ Sbjct: 255 ALEKMFQDGSWRKFIDDNFGEFGKYFPTPPQLERY 289 >gi|145593977|ref|YP_001158274.1| extracellular solute-binding protein [Salinispora tropica CNB-440] gi|145303314|gb|ABP53896.1| extracellular solute-binding protein, family 3 [Salinispora tropica CNB-440] Length = 294 Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats. Identities = 42/234 (17%), Positives = 89/234 (38%), Gaps = 9/234 (3%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 S + + + +K G GF +G+ +GFDV+ + ++ + KI+++ Sbjct: 41 AAGSTMERLNEAQAIKIGTKFDQPGFGLKGLSGEPEGFDVEIAKIIAKELGIPEDKIEWV 100 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSV 140 +K R + +D++ +T+ E ++F Y GQ ++ K I+ Sbjct: 101 ETPSKVREDKIADGSVDMIVA--TYTIKDERKERVSFAGPYYEAGQNIMVKKDDTSITGP 158 Query: 141 SQLSG--ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 IC G+T + Y K ++ + F+ ++ A ++ + DA T D Sbjct: 159 ESFQDGSKKICSVTGSTPIEEIKKYLK--DIPSQLVPFDTYDKCRDALQSGQVDAVTTDN 216 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 L D + + +K P + + D E+ + ++ T Sbjct: 217 VILLGYIA--DDEDAFKLAGENFTKEPYGIGVKKDDAEFRDFINDILEEAFTDG 268 >gi|220908696|ref|YP_002484007.1| family 3 extracellular solute-binding protein [Cyanothece sp. PCC 7425] gi|219865307|gb|ACL45646.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7425] Length = 259 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 46/223 (20%), Positives = 84/223 (37%), Gaps = 10/223 (4%) Query: 11 CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70 ++L + S A+ L I +RG L + L G +G ++D R L+ Sbjct: 6 VFLLLAWLSLPAQAAELKQILQRGRLIVAVKDNLPPLGFRDQGGQLQGLEIDIARQLAKE 65 Query: 71 IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130 +F + +++ P+ +R A+ + Q D+ N T R + P YF G G + Sbjct: 66 LFGTETAVEFKPVANVDRLEAVLTGQADLAIANLTATAGRYRLVNF--TPPYYFTGTGIL 123 Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190 K K + ++ L+ + V G++ L + +E Sbjct: 124 T-KGKSLQRLTDLNHRPVAVLQGSSAIAQLRFLLP----NVKLVGVNSYQEAKTKLDRGE 178 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 A D + L + T + + P ++S PLA A +G Sbjct: 179 VGAVAADSTVLTGWRQTATN---YYLFPTLLSADPLAIAFPKG 218 >gi|302391066|ref|YP_003826886.1| extracellular solute-binding protein family 3 [Acetohalobium arabaticum DSM 5501] gi|302203143|gb|ADL11821.1| extracellular solute-binding protein family 3 [Acetohalobium arabaticum DSM 5501] Length = 258 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 51/273 (18%), Positives = 101/273 (36%), Gaps = 22/273 (8%) Query: 1 MYKDFFVSILCLIILFF------TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M K + ++ L+ L + + + +IK+ G L G + F G Sbjct: 1 MSKRIKLFLVTLLGLALVVGVVGCTGTEEKTTFNEIKEEGKLVVGCSADYKPFEYPNEEG 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + GFDV+ A+ + ++++ +L+SK+ D++ T R ++ Sbjct: 61 EIVGFDVELMEAVGEELG---LEVEFKDTAFDGLIPSLKSKKFDVIVSAMTITDKRAEAV 117 Query: 115 GLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + + GQ + + I L+G + VQ GTT +L ++ +K Sbjct: 118 DFSE--PYFNAGQVIAVKEGSTDIQGPEDLAGKVVGVQLGTTGDLEASEMEDIKQVK--- 172 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 +E++ + R R DA D+ A + N + I+ ++ A+ Sbjct: 173 -RYEKITQAFIELRNGRIDAVVNDLPVTAAYIMDNP---DVEIIGKPFTEENYGIAMRPK 228 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 D E ++ T E G + N+ K Sbjct: 229 DDELEQKINETIE---KLRENGTYDEIYNKWFK 258 >gi|317064770|ref|ZP_07929255.1| extracellular amino acid-binding protein [Fusobacterium ulcerans ATCC 49185] gi|313690446|gb|EFS27281.1| extracellular amino acid-binding protein [Fusobacterium ulcerans ATCC 49185] Length = 287 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 51/251 (20%), Positives = 90/251 (35%), Gaps = 9/251 (3%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K F+++L ++IL S L +KK G+ G++ N + GFD+ Sbjct: 32 MKKLFMAVLVIMILASVSLFAADGSLEKVKKDGYFTVGLDATFAPMGFRDENEEIVGFDI 91 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D + ++ + + ++ P L+SK ID++ T R Sbjct: 92 DLAKEVAKRMGVEA---KFKPCEWDGIIFDLRSKNIDMVWNGMTITEQRSKQAAF--TTP 146 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 DGQ K I+ VS+L G + VQ G++ + A +K + E Sbjct: 147 YLVDGQIIFSRKGNEINKVSELEGKVVGVQLGSSGSQAVERNAIAPKLK-EIKKYATNVE 205 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A R DA D + K N + + + +S A A+ + D + + Sbjct: 206 ALLDLEAGRTDAVVMDA---ISGKYYNAKKNTLSFSEESLSDEYFAVALRKDDKALLDEI 262 Query: 242 SWTHYAMVTAE 252 + M Sbjct: 263 NRLLDEMKKDG 273 >gi|289674517|ref|ZP_06495407.1| extracellular solute-binding protein [Pseudomonas syringae pv. syringae FF5] Length = 261 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 48/261 (18%), Positives = 91/261 (34%), Gaps = 11/261 (4%) Query: 1 MYKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + + L L + +A+ L D+ RG LK + F V + +G Sbjct: 1 MTKRYSALLTALFASLMLSQTPAHANGLDDVVTRGTLKVAVPQDFPPFGSVGPDMKPRGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D + L+ + K++ P+N+ R L + ++D++ + RE + + Sbjct: 61 DIDTAQLLADKL---KVKLELTPVNSTNRIPFLTTGKVDLVISSLGKNPDREKVIDFSRA 117 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 ++ + ++ L G +I V G ++ L+ FE Sbjct: 118 YAPFY--LAVFGPPDSPVKDIADLKGKTISVTRGAIEDIELSKVAPE---GAVIKRFEDN 172 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AAY A + D + A+ + P L + SP+ + +G E Sbjct: 173 NSTIAAYLAGQTDLIASGNVVMVAI--SERNPKRIPALKVKLKDSPVYVGVNKGQPELLG 230 Query: 240 IVSWTHYAMVTAEELGITQKN 260 V A L + Sbjct: 231 KVDEILNAAKADGSLEKASQT 251 >gi|27379088|ref|NP_770617.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] gi|27352238|dbj|BAC49242.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] Length = 265 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 58/274 (21%), Positives = 105/274 (38%), Gaps = 16/274 (5%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K F + + +A L D+ G L+ GI T + G+ G D D Sbjct: 5 KSLFAIAATALAVLAAPNLAHADKLQDVLGSGKLRVGILTDAAPWGFKDDKGEIAGLDAD 64 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 R +++ + K++ +P+ R +L S +ID+L T R + + Sbjct: 65 LARLIAADMG---VKLELVPVTGAARIPSLLSDKIDMLIAGLGATPERAQQVMFSQ--PY 119 Query: 123 YFDGQGFIMHKKKG---ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 G K L G S+ V G+T ++ L D K + FE Sbjct: 120 AVVNLGVYGAKSLPSATSKKPDNLDGRSVAVAKGSTLDVWLTDNAP----KVKLVRFEDT 175 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AA+ A + D + + + ALK+ + P++ V L +I +SP + QG+ N Sbjct: 176 PAALAAFLAGQADTFAENSAI--ALKVQDQNPTKEVELKFLIRQSPAHVGVRQGEQNLLN 233 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 ++ + +LG Q + ++ + P + Sbjct: 234 WINTDIFFNKLNGKLGALQ--LKWFREEQSLPTL 265 >gi|295675491|ref|YP_003604015.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] gi|295435334|gb|ADG14504.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] Length = 278 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 92/249 (36%), Gaps = 19/249 (7%) Query: 2 YKDFFVSILCLIILFFT--------SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 F ++ L+ + + + S L + +RG L+ G F + Sbjct: 9 KAAFLFAVAGLLAITGCTKVATPEQGAAASPSTLQGVLQRGTLRVGDCLTFAPFGFYNKD 68 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G G+DVD + L+ + K++ + + R LQ+ ++D++ N L R Sbjct: 69 GQPDGYDVDLAKELAKQMG---VKLEVVNTTSANRIPNLQTSKVDVVFCNFTRNLERAKV 125 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + + ++ K GI S+ +SG +I G+T D ++ N+ Sbjct: 126 IEF--TAPYVVASEALLVRKNSGIQSIKDMSGRTIATVKGSTN----GDEVRSLNIPVKI 179 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 ++ + A + + DA D + L P V ++ A + G Sbjct: 180 QEYDSSQAAILAVKQGQADAMIEDNNFLAYQAKL--DPELAVTNEALVPLEYNAFGVKAG 237 Query: 234 DTEWYNIVS 242 D EW N ++ Sbjct: 238 DQEWLNYLN 246 >gi|261883825|ref|ZP_06007864.1| Solute-binding protein/glutamate receptor [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 173 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 70/157 (44%), Positives = 99/157 (63%) Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 RA+S+A+F DP K+ ++PL+ KERF ALQS +D+LS T WTL R+ +G+ F Y+ Sbjct: 1 RAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSCQTTWTLSRDAGMGIHFVGTAYY 60 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 DGQGF++ K G+ S +L GASIC + GTTTE +ADY AHN+KY P+V + + + Sbjct: 61 DGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYCGAHNIKYEPVVIDSADGLLK 120 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221 A+ R D YT D ALYA +L P + + + Sbjct: 121 AFETGRGDVYTTDALALYAQRLILAEPDAYGVFSEGY 157 >gi|329122022|ref|ZP_08250631.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Dialister micraerophilus DSM 19965] gi|327467074|gb|EGF12586.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Dialister micraerophilus DSM 19965] Length = 265 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 54/252 (21%), Positives = 95/252 (37%), Gaps = 11/252 (4%) Query: 13 IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72 ++ S S KK + G++ NG+ GFDVD +A+S I Sbjct: 20 LVAGCGSDSAKNDSTQKPKK---IIAGLDDTFAPMGFRDENGNIVGFDVDIAKAVSKEIG 76 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 + I++ P++ + L S +ID + T RE + + Q +++ Sbjct: 77 VE---IEFKPIDWASKESELNSGRIDCIWNGLSITPEREEKMDF--TNPYMNNDQIYVVM 131 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 I S S L G IC Q G+T +L L + + A+R D Sbjct: 132 DNSDIKSASDLKGKRICFQEGSTVDLALNKNMDLRHSFGEIKTYPDFTSCFLDLDANRAD 191 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 A D + P ++ LP+ +S P A + +G+ E +++ + + Sbjct: 192 AVLVDGILADYYMTKS--PGKYRRLPEKLSTEPFAIGVKKGNEEIVKMLNEGIEKVKASG 249 Query: 253 E-LGITQKNINQ 263 E I+QK + Sbjct: 250 EAAKISQKWFQR 261 >gi|239941192|ref|ZP_04693129.1| putative ABC transporter solute-binding protein [Streptomyces roseosporus NRRL 15998] gi|239987666|ref|ZP_04708330.1| putative ABC transporter solute-binding protein [Streptomyces roseosporus NRRL 11379] Length = 344 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 42/264 (15%), Positives = 87/264 (32%), Gaps = 15/264 (5%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFD 73 + + + IK+RG L G++ + +GD +GFD+D RA++ + Sbjct: 69 ASLPASGDDGPNIDKIKERGKLIAGVDQNSFRWGYRNPESGDLEGFDIDLVRAIADDLLG 128 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 DP + + + +R AL++ ++D++ R R + + + GQ + K Sbjct: 129 DPDAVIFRAIPTNQRIAALENDRVDVVVRTMTINCKRLEQVSFSTA--YFQAGQQVLAPK 186 Query: 134 KKGISSVS-QLSGASICVQAGTTTELTL---------ADYFKAHNMKYHPIVFERVEEID 183 + I+ L G +C G+T L D F + + Sbjct: 187 ESPITGYDSSLKGKRVCSAEGSTAYEALEKKSFGALYKDDFDGTERDPDLLTVPNQLDCL 246 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 + DA D + P+ + D + A +G + V+ Sbjct: 247 VRLQLGEVDAVVTDNALAAGQAAQ--DPAVELKGKDPFTTEYYGVATKKGSDDLVARVNK 304 Query: 244 THYAMVTAEELGITQKNINQVSKD 267 + ++ + Sbjct: 305 VLVDYRAGGKDSAWMRSYEKWLAT 328 >gi|330830266|ref|YP_004393218.1| amino acid ABC transporter periplasmic amino acid-binding protein [Aeromonas veronii B565] gi|328805402|gb|AEB50601.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Aeromonas veronii B565] Length = 266 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 56/272 (20%), Positives = 101/272 (37%), Gaps = 19/272 (6%) Query: 1 MYKDFFVSILCL-IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K +S L I S L + +RG L+ G + G F G + GF Sbjct: 1 MIKKLILSTLLFCGIATAAPTPAPTSTLDAVLERGVLRVGFDAGYQPFEMTNKQGQYIGF 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD + ++ + K++++ AL + + D++ T R + + A Sbjct: 61 DVDLAKMVAKEMG---VKVEFVNTAWDGIIPALLTNKFDVIMGGMTVTPQRNLRVNFAD- 116 Query: 120 PITYFDGQGFIMHKKKG--ISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIV 175 GQ ++ K+K I S + L+ I V+ GTT E + + Sbjct: 117 -PYIVVGQTIVLRKEKAGEIKSFTDLNDPKYKIAVKLGTTGEQAVKRLIPKA----TLLQ 171 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 FE ++ + DA+ D+ Y + V L + PLA AI +GD Sbjct: 172 FETQDDAKLEVINGKVDAFVYDLP--YNAIFASQNQGAVVHLDKPFTFEPLAWAIRKGDQ 229 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 + ++W + + + G + + + Sbjct: 230 ---DTLNWFNNYLRQIKGDGSYDRLYKKWFES 258 >gi|253582766|ref|ZP_04859986.1| extracellular solute-binding protein [Fusobacterium varium ATCC 27725] gi|251835342|gb|EES63883.1| extracellular solute-binding protein [Fusobacterium varium ATCC 27725] Length = 256 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 49/251 (19%), Positives = 91/251 (36%), Gaps = 9/251 (3%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K F+++L +++ S + L +KK G+ G++ N + GFD+ Sbjct: 1 MKKLFMAVLVIMVSASISLFAADNSLEKVKKDGYFTVGLDATFAPMGFRDENEEIVGFDI 60 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D + ++ + + +++ P L+SK ID++ T R Sbjct: 61 DLAKEVAKRMGVE---VKFKPCEWDGIIFDLRSKNIDMVWNGMTITEERSKQAAF--STP 115 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 DGQ K I+ VS+L G + VQ G++ + A +K + E Sbjct: 116 YLVDGQIIFSRKGNEINKVSELEGKVVGVQLGSSGAQAVERNAIAPKLK-GIKKYATNVE 174 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A R DA D + K N + + + +S A A+ + D + + Sbjct: 175 ALLDLEAGRTDAVVMDA---ISGKYYNAKKNTLSFSEESLSDEYFAIALRKDDKALLDEI 231 Query: 242 SWTHYAMVTAE 252 + M Sbjct: 232 NRLLDEMKKDG 242 >gi|255528434|ref|ZP_05395230.1| extracellular solute-binding protein family 3 [Clostridium carboxidivorans P7] gi|296188321|ref|ZP_06856713.1| bacterial extracellular solute-binding protein, family 3 [Clostridium carboxidivorans P7] gi|255507868|gb|EET84312.1| extracellular solute-binding protein family 3 [Clostridium carboxidivorans P7] gi|296047447|gb|EFG86889.1| bacterial extracellular solute-binding protein, family 3 [Clostridium carboxidivorans P7] Length = 275 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 48/276 (17%), Positives = 92/276 (33%), Gaps = 22/276 (7%) Query: 5 FFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 +S++ + LF + + L IKK G LK G+ + Sbjct: 10 LMLSVIFVAALFAGCGKSSSSQSQAQGGNSLEKIKKAGVLKVGLEDSFPPMEFRDKQNEL 69 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 KGFD+D + + K +++ + LAL+S + D + T R+ + Sbjct: 70 KGFDIDMANEIGKKLG---VKTEFVCTDFNGIILALKSGKFDTIISGLSITDERKKEISF 126 Query: 117 AFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + Q ++ + + L G ++ V GTT+E Sbjct: 127 --SDPYVMNSQIIVVKNGNTAVKGANDLKGKTVGVGLGTTSESVAT----KMQGLKEVKK 180 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 +++ E R DA D D+ ++ +L + ++K P+ D Sbjct: 181 YDKTTEELQDLLIGRIDAVIVDEPVGRYYISEADKKGKYEVLSEKLTKEPMGIGFKNEDK 240 Query: 236 EWYNIVSWTHYAMVTAEELGITQK-NINQVSKDTTN 270 E + V ++ G K ++ D N Sbjct: 241 ELKDAVQKAIN---ELKKDGTFSKLSVKWFGTDIYN 273 >gi|323525063|ref|YP_004227216.1| family 3 extracellular solute-binding protein [Burkholderia sp. CCGE1001] gi|323382065|gb|ADX54156.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1001] Length = 267 Score = 163 bits (414), Expect = 2e-38, Method: Composition-based stats. Identities = 48/243 (19%), Positives = 88/243 (36%), Gaps = 11/243 (4%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 TS + +A L +I K G LK + F V + +G+D+D L+ ++ Sbjct: 25 MTSPAVHADTLDNIAKAGVLKVAVPEDYPPFGSVGPDMKPQGYDIDTAALLAKSM---NV 81 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 K++ +P+N+ R LQ+ ++D++ + T RE + + Y+ QG Sbjct: 82 KLELVPVNSANRIPYLQTGKVDLVISSLGKTPDREKVIDFSTAYAPYY--QGVFGPADIK 139 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 +S + L+G ++ G EL L +K FE AA+ + + Sbjct: 140 VSGPADLTGKTVGATRGALEELGLTQMAPNATIK----RFEDNNATIAAFLSGQVQLIAA 195 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 A+ P +I SP + + + V+ L Sbjct: 196 GNIVAAAILA--KNPPRRPEPKFVIKNSPCFVGMNKNEPRLQQKVNAAIAQAKQDGTLNT 253 Query: 257 TQK 259 K Sbjct: 254 MSK 256 >gi|326803928|ref|YP_004321746.1| ABC transporter glutamine-binding protein GlnH [Aerococcus urinae ACS-120-V-Col10a] gi|326650155|gb|AEA00338.1| ABC transporter glutamine-binding protein GlnH [Aerococcus urinae ACS-120-V-Col10a] Length = 280 Score = 163 bits (414), Expect = 3e-38, Method: Composition-based stats. Identities = 39/235 (16%), Positives = 88/235 (37%), Gaps = 14/235 (5%) Query: 35 FLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 ++ G+ F G+ +GFD+D + L+ I ++ +++ + +K R L+ Sbjct: 43 KIRWGVKVDTNLFGFYNIEKGEVEGFDIDIAKELTKRIVGPNAQAEFVEVTSKTRIPLLK 102 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQA 152 + ID + + R+ + I + GQ ++ + V L ++ Sbjct: 103 NANIDAIIATMTISDERKKQVDF--SDIYFNAGQALLVGPDVKLKGVEDLGPDHTVLAVK 160 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 G+T+ + ++ + E E A ++ + A T D + L + N Sbjct: 161 GSTSAQRIKEHAPEA----KVLELENYSEAFTALKSGQGQAMTTDNAILLGISKENP--- 213 Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 ++ I ++ P A+ +G ++ ++ MV G Q + D Sbjct: 214 DYHIAGSTFTREPYGIAVNKGQDDFRQAINQGLKDMVA---DGSYQAIFKKWFGD 265 >gi|116334344|ref|YP_795871.1| amino acid ABC transporter periplasmic protein [Lactobacillus brevis ATCC 367] gi|116099691|gb|ABJ64840.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus brevis ATCC 367] Length = 278 Score = 163 bits (414), Expect = 3e-38, Method: Composition-based stats. Identities = 40/266 (15%), Positives = 95/266 (35%), Gaps = 20/266 (7%) Query: 1 MYKDFF--------VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK- 51 M K V++ +I ++ ++ ++ +K + G+ F + Sbjct: 1 MKKWIRSLSLLLSLVALTAVISGCGSTALSSRNVWKTDQKSKTITWGVKADTRLFGLLDT 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 +G KGF+VD +AL+ + +K +++ + + R L++ ID + T R Sbjct: 61 KDGKIKGFEVDLAKALTKQMLGKNAKAKFIQVTSSTRMPMLKNGNIDAIIATMTNTAERR 120 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNM 169 + ++ GQ ++ + I +V L+ ++ G+ + + Sbjct: 121 KQVDF--SNTYFYAGQSLLVKQGSSIKNVKDLNKQKGTVLGVVGSDSVENVQKVAPNA-- 176 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + + A ++ + A T D LY + + N +V+ P A Sbjct: 177 --TVLQLTDYAQAMTALKSGQGQALTTDNGILYGMSVQNPG---YVVTGGTFVSEPYGIA 231 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELG 255 + + ++ V+ + E Sbjct: 232 MDKNQQQFEAAVNQALKEVRANGEYN 257 >gi|12831456|gb|AAK08611.1| GtpB [Agrobacterium tumefaciens] Length = 289 Score = 163 bits (414), Expect = 3e-38, Method: Composition-based stats. Identities = 48/270 (17%), Positives = 92/270 (34%), Gaps = 13/270 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M ++ + L S +A L IK G ++ G+ F +G G Sbjct: 29 MISRTATALGTIAALMLASAPASAQTLPKAIKDAGIIRIGVKCDSPPFGASGTDGKPAGI 88 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 ++D + + A F +K + + R +L +ID++ T RE + + Sbjct: 89 EIDIAKQIGIAAFGSANKAELSCVATDARIPSLTGGKIDLIIATLGKTPSREQV--IDYS 146 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I Y+ I+ K+ + ++ L G S+ + G + L + I Sbjct: 147 NIYYWGSSRVIVPKESKVQKLADLDGKSMLIIKGGSQLKWLKERIP----TLEFIQLNTN 202 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + A + R D Y GD + L + + L + + I +G+ E Sbjct: 203 ADNLQALQQGRADGYVGDAITIATLASSYP---QFRALEEPVDLGFNGVGIRKGEDELKA 259 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTT 269 V+ ++ K + KD Sbjct: 260 FVNGVLK---KLKDEKFYSKTVPTYVKDPP 286 >gi|300934588|ref|ZP_07149844.1| putative extracellular solute-binding protein [Corynebacterium resistens DSM 45100] Length = 408 Score = 163 bits (414), Expect = 3e-38, Method: Composition-based stats. Identities = 51/251 (20%), Positives = 96/251 (38%), Gaps = 19/251 (7%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 + +I KRG L GI L G+ GF++D R ++ IF+DP K+++ + + Sbjct: 122 VAEIHKRGRLIVGIAQSLNRLGYRDPVTGELVGFEIDLAREIARDIFNDPEKVEFRYVES 181 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 + R AL+ ++DI+SR T R+ ++ + I V L G Sbjct: 182 RNREKALREGEVDIISRTMSITSARQQKTEF--SSPYLTVRPRLLVPENSHIQHVGDLKG 239 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 ++C +T+ L +Y + + A + H+ DA D + L L+ Sbjct: 240 KTVCATNDSTSASALRNY-----DLSKVLATRTWTDCLMALQRHQADAVYTDDAILSGLQ 294 Query: 206 LTNDRPSEHVILPDIISKSPLAPAII-----QGDTEWYNIVSWTHYAMVTAEELGITQKN 260 + ++ D +++ I + T V+ T + G + Sbjct: 295 AQDPH---MKLVGDDFAENHYGVGIPIKIDGKPSTGLTMQVNSTMERIRR---DGTWARL 348 Query: 261 INQVSKDTTNP 271 ++ KD P Sbjct: 349 FDKWLKDYLGP 359 >gi|284032614|ref|YP_003382545.1| extracellular solute-binding protein family 3 protein [Kribbella flavida DSM 17836] gi|283811907|gb|ADB33746.1| extracellular solute-binding protein family 3 [Kribbella flavida DSM 17836] Length = 307 Score = 163 bits (414), Expect = 3e-38, Method: Composition-based stats. Identities = 50/256 (19%), Positives = 91/256 (35%), Gaps = 9/256 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 ++ IK RG G+ ANG GFD++ R +S+ + DP KI+Y + Sbjct: 58 SATFAKIKARGNAVVGVKADQPNLGYKDANGKRCGFDIEIARMVSAQLGFDPEKIEYKEI 117 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV--S 141 + R A+ +ID T R+ + A + GQ ++ K Sbjct: 118 PSANRETAIAGGEIDYYVGTYSITDKRKKLVSFA--GPYFIAGQDLLVRKDDTSMDAGKD 175 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L G +C G+T + D + + F+ E + ++ DA T D + L Sbjct: 176 GLKGKKVCSATGSTPIQKVKD--EGLTEPNNISEFKTYSECVSQLLDNKTDAVTTDDAIL 233 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQKN 260 P E ++ S + D + V+ A T + + Sbjct: 234 KGYAANA--PDELRVVGKPFSTEKYGIGLPLADKALRDKVNAGLEASFTDGTWKAVYDET 291 Query: 261 INQVSKDTTNPDVQRF 276 + + T P ++++ Sbjct: 292 LGKSGSAGTPPQLEKY 307 >gi|257470564|ref|ZP_05634654.1| hypothetical protein FulcA4_14556 [Fusobacterium ulcerans ATCC 49185] Length = 256 Score = 163 bits (414), Expect = 3e-38, Method: Composition-based stats. Identities = 51/251 (20%), Positives = 90/251 (35%), Gaps = 9/251 (3%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K F+++L ++IL S L +KK G+ G++ N + GFD+ Sbjct: 1 MKKLFMAVLVIMILASVSLFAADGSLEKVKKDGYFTVGLDATFAPMGFRDENEEIVGFDI 60 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D + ++ + + ++ P L+SK ID++ T R Sbjct: 61 DLAKEVAKRMGVEA---KFKPCEWDGIIFDLRSKNIDMVWNGMTITEQRSKQAAF--TTP 115 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 DGQ K I+ VS+L G + VQ G++ + A +K + E Sbjct: 116 YLVDGQIIFSRKGNEINKVSELEGKVVGVQLGSSGSQAVERNAIAPKLK-EIKKYATNVE 174 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A R DA D + K N + + + +S A A+ + D + + Sbjct: 175 ALLDLEAGRTDAVVMDA---ISGKYYNAKKNTLSFSEESLSDEYFAVALRKDDKALLDEI 231 Query: 242 SWTHYAMVTAE 252 + M Sbjct: 232 NRLLDEMKKDG 242 >gi|78356430|ref|YP_387879.1| extracellular solute-binding protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78218835|gb|ABB38184.1| amino acid ABC transporter substrate-binding protein, PAAT family [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 271 Score = 163 bits (414), Expect = 3e-38, Method: Composition-based stats. Identities = 52/276 (18%), Positives = 109/276 (39%), Gaps = 22/276 (7%) Query: 1 MYKDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M + +L + ++ +F+ S+L DI KRG L+ G + G F +G+ Sbjct: 1 MKFVKALVLLLVTVMAVPAFAGDIDLAKKSVLNDILKRGELRVGFDAGYPPFEMTDKSGN 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER--FLALQSKQIDILSRNTDWTLLREIS 113 + GFD+D + L+ ++ ++++P+N +L S + D++ T R + Sbjct: 61 FVGFDIDLGKELAKSMG-----VKFVPVNTDFDGMIPSLLSGKFDVIISGMTLTQERNMK 115 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQA--GTTTELTLADYFKAHNMKY 171 +G + + K + S L+ V + GTT E Y K Sbjct: 116 IGFSEPYLVMGQTVLVAAKHKGTVKSYKDLNDPKFIVVSRMGTTGEEATKKYLPKATYK- 174 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 F++ + R DA+ D+ + + + +L + + P+A Sbjct: 175 ---SFDKEVDCAMEVVNGRADAFVYDLPVNEVFQAQQGKDKTY-LLNEPFTFEPMAVGYK 230 Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 QGD ++ N ++ + + + G ++ N+ + Sbjct: 231 QGDPDFANFIN---HFLRQLKNDGRYERMYNKWLRS 263 >gi|257461155|ref|ZP_05626253.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] gi|257441529|gb|EEV16674.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] Length = 270 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 47/270 (17%), Positives = 110/270 (40%), Gaps = 25/270 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M F +++ C I A+ L +I++ G ++ G+ G +E NG ++GF+ Sbjct: 1 MRSLFILALFCASIF--------ANTLDEIRQAGVIRVGVREGRPPLSESN-NGKFEGFE 51 Query: 61 VDFCRALSSAIFDDP-SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 ++ +++ IF D ++Q++ + A ER L++ ++D++ T R+ + + Sbjct: 52 IELASSIAKDIFGDKKGEVQFVAVTAGERIPFLKNNKVDMVIGTFMITQERKKQVDFSL- 110 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQA---GTTTELTLADYFKAHNMKYHPIVF 176 G + K+ + +Q+ I ++ G+ TE Y + + + Sbjct: 111 -PYLSVNFGIVTRKEDQVKDFAQVRDMRISIEKNPNGSMTE----RYLRKEKFS-NLVYC 164 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + E A + R D Y D + A + +D V ++ + L + +G+ Sbjct: 165 KNTSECYAMMKDGRADGYANDNIIVLAYAVVDDT--LEVPFKNLGAAEFLGVGVQKGNQS 222 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSK 266 + ++ ++ + G +K + Sbjct: 223 LLDFIN---ADLIKLSKEGFFKKAYEDTFE 249 >gi|291444634|ref|ZP_06584024.1| sugar-binding protein [Streptomyces roseosporus NRRL 15998] gi|291347581|gb|EFE74485.1| sugar-binding protein [Streptomyces roseosporus NRRL 15998] Length = 332 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 42/264 (15%), Positives = 87/264 (32%), Gaps = 15/264 (5%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFD 73 + + + IK+RG L G++ + +GD +GFD+D RA++ + Sbjct: 57 ASLPASGDDGPNIDKIKERGKLIAGVDQNSFRWGYRNPESGDLEGFDIDLVRAIADDLLG 116 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 DP + + + +R AL++ ++D++ R R + + + GQ + K Sbjct: 117 DPDAVIFRAIPTNQRIAALENDRVDVVVRTMTINCKRLEQVSFSTA--YFQAGQQVLAPK 174 Query: 134 KKGISSVS-QLSGASICVQAGTTTELTL---------ADYFKAHNMKYHPIVFERVEEID 183 + I+ L G +C G+T L D F + + Sbjct: 175 ESPITGYDSSLKGKRVCSAEGSTAYEALEKKSFGALYKDDFDGTERDPDLLTVPNQLDCL 234 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 + DA D + P+ + D + A +G + V+ Sbjct: 235 VRLQLGEVDAVVTDNALAAGQAAQ--DPAVELKGKDPFTTEYYGVATKKGSDDLVARVNK 292 Query: 244 THYAMVTAEELGITQKNINQVSKD 267 + ++ + Sbjct: 293 VLVDYRAGGKDSAWMRSYEKWLAT 316 >gi|254421935|ref|ZP_05035653.1| Bacterial extracellular solute-binding protein, family 3 [Synechococcus sp. PCC 7335] gi|196189424|gb|EDX84388.1| Bacterial extracellular solute-binding protein, family 3 [Synechococcus sp. PCC 7335] Length = 288 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 52/263 (19%), Positives = 94/263 (35%), Gaps = 17/263 (6%) Query: 1 MYKDFFVSILCLIIL-----FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M + + ++ + F S + A+ L +I++RG+L + + + Sbjct: 1 MRRKLLAGVGSILGVQFLLPLFVSLNAFAAELSEIRERGYLVVAVKDNRPPMGFLNSADQ 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GF++D R L+ + D ++ +P +R A+ ++D+ T R + Sbjct: 61 LSGFEIDIARKLAEDLLGDADAVELVPTRNVDRLDAVIENRVDVAIAALTITEPRRRIVS 120 Query: 116 LAFRPITYFDGQGFIMH----KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 Y DG FI I ++ L +I V ++T L+ A Sbjct: 121 F--SYPYYLDGTAFITRLPTDSAPDILTLHDLQLGTIAVLERSSTVAQLSYLLPAAQQ-- 176 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + E + DA+ GD S L + H +LPDIIS PLA + Sbjct: 177 --VGVGSYLEAQTLVESGAVDAFAGDASVLAGWTMEGGALMNHSMLPDIISAEPLAVVLP 234 Query: 232 QGD--TEWYNIVSWTHYAMVTAE 252 +G + V+ Sbjct: 235 KGQQYSPLQTAVNKAIQRWYKEG 257 >gi|126667081|ref|ZP_01738056.1| putative ABC transporter periplasmic amino acid-binding protein [Marinobacter sp. ELB17] gi|126628487|gb|EAZ99109.1| putative ABC transporter periplasmic amino acid-binding protein [Marinobacter sp. ELB17] Length = 273 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 53/244 (21%), Positives = 91/244 (37%), Gaps = 9/244 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + S L L + FTS + A L + +RG L CG+ N GFD Sbjct: 1 MMRKLATS-LVLSCIAFTSVNATADQLDTVIQRGTLNCGVVLDFPPMGYFDGNNQPAGFD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V +C L++A+ + + L L +R +L S + D++ +T TL R S+G Sbjct: 60 VGYCNDLAAALGVESN---ILNLTWGDRIPSLISGKTDVVIGSTSDTLERAKSVGF--TY 114 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY-HPIVFERV 179 + I K K I S L + GTT E Y + + F+ Sbjct: 115 PYFVFKFQVIAPKNKNIQSFDDLKNLKVGAALGTTYETEYLAYAEKKGWGTDNYTAFKSE 174 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-SPLAPAIIQGDTEWY 238 + + DA + + A KL + + P + + + + + W Sbjct: 175 NDAYLGLYQGKVDAVISTNTNI-ATKLQSAEFKDFAAGPFVPNYDDVVGLIAKRSEGAWI 233 Query: 239 NIVS 242 + ++ Sbjct: 234 SYLN 237 >gi|323698676|ref|ZP_08110588.1| extracellular solute-binding protein family 3 [Desulfovibrio sp. ND132] gi|323458608|gb|EGB14473.1| extracellular solute-binding protein family 3 [Desulfovibrio desulfuricans ND132] Length = 265 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 42/254 (16%), Positives = 91/254 (35%), Gaps = 11/254 (4%) Query: 7 VSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 + + C++ L A L IK G LK + F V + G+D+D Sbjct: 11 MVLACMLALVLACGPALASDTLSQIKDAGVLKVAVPQDFPPFGSVGPDMQPLGYDIDMAS 70 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 +++ + K++ +P+ + R L + ++D++ + R + + +F+ Sbjct: 71 LIAAKLG---VKVKLVPVTSTNRIPYLTTGKVDLVISSLGKNPKRAAVIDFSDAYAPFFN 127 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 G + ++ + L+ ++ V G+ +L L + FE AA Sbjct: 128 G--VFGTSDEKVAGPADLADKTVAVTRGSIEDLELTKVAPESTV---IKRFEDNSSTIAA 182 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 Y+ + D + A + +P++ + +I SP I + V+ Sbjct: 183 YQTGQVDLVATGN--VVAASINEKKPAKMLETKFMIKNSPCYVGIAKDQPALMAKVNAII 240 Query: 246 YAMVTAEELGITQK 259 LG + Sbjct: 241 AGAKKDGSLGAISE 254 >gi|304395377|ref|ZP_07377260.1| extracellular solute-binding protein family 3 [Pantoea sp. aB] gi|304356671|gb|EFM21035.1| extracellular solute-binding protein family 3 [Pantoea sp. aB] Length = 261 Score = 163 bits (413), Expect = 4e-38, Method: Composition-based stats. Identities = 48/255 (18%), Positives = 97/255 (38%), Gaps = 13/255 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 + S A L DI+KRG ++ + F V + +G+D+D + L+ + K+ Sbjct: 18 AGSALADQLQDIQKRGVIRVAVPQDFPPFGSVGTDLQPQGYDIDTAKYLAKQM---KLKL 74 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 Q +P+++ R LQ+ ++D++ + RE + +F G K I Sbjct: 75 QLVPVSSANRVPYLQTDKVDLVISSMGKNAEREKVIDFTRAYAPFF--LGVFGPKGDEIK 132 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + S LSG SI V G ++ L+D +E +AY + + Sbjct: 133 AASALSGKSIGVTRGAVEDMVLSDVAPK---DAQIKRYEDNNTTLSAYLSGQVQYVATGN 189 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 + A+ P++ + ++ SP + + + V+ + + G Sbjct: 190 LVVAAIARQ--NPAKAPVAQFMLKDSPCFIGLKKDEPALKAKVNALIEQGI---KDGTLN 244 Query: 259 KNINQVSKDTTNPDV 273 K + K ++ Sbjct: 245 KLSEEWLKAPLPANL 259 >gi|313673774|ref|YP_004051885.1| amino acid abc transporter substrate-binding protein, paat family [Calditerrivibrio nitroreducens DSM 19672] gi|312940530|gb|ADR19722.1| amino acid ABC transporter substrate-binding protein, PAAT family [Calditerrivibrio nitroreducens DSM 19672] Length = 268 Score = 163 bits (413), Expect = 4e-38, Method: Composition-based stats. Identities = 60/276 (21%), Positives = 101/276 (36%), Gaps = 21/276 (7%) Query: 1 MYKDFFV--SILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K FV S+L + LF + S L I KR L+ G+ G + F G+ Sbjct: 1 MKKLLFVIFSLLFVASLFAADMTVWEKSTLNSIIKRKELRVGLEAGYMPFELKDKKGNII 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD + ++ + K+ + AL + + DI+ T R + + A Sbjct: 61 GFDVDIAKEMAKELG---VKLTLVNTAWDGIIPALLTNKFDIIMSGMTITPQRNMQVNFA 117 Query: 118 FRPITYFDGQGFIMHKK--KGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHP 173 GQ ++ K I S L+ ++ + G T + Sbjct: 118 D--PYIIVGQTILIRKDLAGKIKSYKDLNDPKYTVVTKLGVTADFATKKLMPKA----KL 171 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 +FE +E + DA+ D+ N + V L + PLA AI +G Sbjct: 172 RLFETEQEAAMEVINGKADAFVYDLPYNAIFYAQNKN--KLVFLDKPFTYEPLAWAINKG 229 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 D ++ +W + ++ + G N+ K T Sbjct: 230 DPDFL---NWLNNFLMIIKGDGRYDAIYNKWFKSTD 262 >gi|296119013|ref|ZP_06837586.1| amino acid ABC transporter, amino acid-binding protein [Corynebacterium ammoniagenes DSM 20306] gi|295968111|gb|EFG81363.1| amino acid ABC transporter, amino acid-binding protein [Corynebacterium ammoniagenes DSM 20306] Length = 356 Score = 163 bits (413), Expect = 4e-38, Method: Composition-based stats. Identities = 44/240 (18%), Positives = 97/240 (40%), Gaps = 12/240 (5%) Query: 30 IKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 I +RG L G++ + A G+ +GF+VD ++ IF D +++ + L + ER Sbjct: 103 IIERGRLIVGVDQSHNLLSYRDAATGELRGFEVDLAHEIAEDIFGDRNRVDFRFLESAER 162 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 AL + +DI+ R T RE + + ++ GI+SV Q SG ++ Sbjct: 163 TRALANGTVDIVIRTMTITPDREKEIAFSQ--PYMITDTRMLVLTSSGITSVEQTSGRTL 220 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 C G+T + D+ N ++ + + + + + +A D + L + + Sbjct: 221 CAVDGSTALDKIPDFAPNSN----LLITKSWGDCLMSLQLGQANAVVVDDALLSGMMAQD 276 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEW--YNIVSWTHYAMVTAEELGITQKNINQVSK 266 S I+ + + + + D + ++ + + ++ G + ++ Sbjct: 277 PYSS---IVGETLDTEVYGIGVRKPDAHYDSRGLIRQVNSTLERIQDDGTWRSLFDEWFG 333 >gi|170691131|ref|ZP_02882297.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] gi|170144380|gb|EDT12542.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] Length = 277 Score = 163 bits (413), Expect = 4e-38, Method: Composition-based stats. Identities = 51/276 (18%), Positives = 104/276 (37%), Gaps = 18/276 (6%) Query: 4 DFFVSILCLIILFFT------SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 F L ++ T + S L + +RG L+ G F +G Sbjct: 12 SLFAVAALLTLVGCTKVAPPEQSAGADSTLKQVLQRGTLRVGDCLTFAPFGFYNKDGQPD 71 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G+DVD + L+ + K++ + + R LQ+ ++D++ N L R + +A Sbjct: 72 GYDVDLAKELAKQMG---VKLEVVNTTSANRIPNLQTSKVDVVFCNFTRNLER--AKEIA 126 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F + ++ K GI S++ ++ +I G+T D ++ NM+ F+ Sbjct: 127 FTNPYVVASEALLVKKSSGIKSINDMANRTIATVKGSTN----GDEVRSLNMQVKIQEFD 182 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + A + + DA D + L + V ++ A + GD W Sbjct: 183 SSQAAILAVKQGQADAMIEDNNFLAYQASLDSN--LTVTNEALVPLEYNAFGVKAGDQVW 240 Query: 238 YNIVSWTHYAMVTAEELG-ITQKNINQVSKDTTNPD 272 N ++ + + +++ + +K + NP Sbjct: 241 LNYLNLFLFNINASKQNAQLYKKWFGTEPRFPLNPQ 276 >gi|323529254|ref|YP_004231406.1| family 3 extracellular solute-binding protein [Burkholderia sp. CCGE1001] gi|323386256|gb|ADX58346.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1001] Length = 277 Score = 163 bits (412), Expect = 4e-38, Method: Composition-based stats. Identities = 49/254 (19%), Positives = 100/254 (39%), Gaps = 12/254 (4%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 + S L + +RG L+ G F +G G+DVD + L+ + K++ Sbjct: 34 SAGTDSTLKQVLQRGTLRVGDCLTFAPFGFYNKDGQPDGYDVDLAKELAKQMG---VKLE 90 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 + + R LQ+ ++D++ N L R + +AF + +++K GI S Sbjct: 91 VVNTTSANRIPNLQTSKVDVVFCNFTRNLER--AKEIAFTNPYVVASEALLVNKSSGIKS 148 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 ++ ++ +I G+T D ++ NM+ F+ + A + + DA D + Sbjct: 149 INDMANRTIATVKGSTN----GDEVRSLNMQVKIQEFDSSQAAILAVKQGQADAMIEDNN 204 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQ 258 L P V ++ A + GD W N ++ + + +++ + + Sbjct: 205 FLAYQASL--DPDLTVTNEALVPLEYNAFGVKAGDQVWLNYLNLFLFNINASKQNAQLYK 262 Query: 259 KNINQVSKDTTNPD 272 K + NP Sbjct: 263 KWFGAEPRFPLNPQ 276 >gi|158423551|ref|YP_001524843.1| putative amino acid ABC transporter periplasmic amino acid-binding protein [Azorhizobium caulinodans ORS 571] gi|158330440|dbj|BAF87925.1| putative amino acid ABC transporter periplasmic amino acid-binding protein [Azorhizobium caulinodans ORS 571] Length = 307 Score = 163 bits (412), Expect = 4e-38, Method: Composition-based stats. Identities = 48/277 (17%), Positives = 90/277 (32%), Gaps = 11/277 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + K + + + S + I++ G + G V FA + N G+ Sbjct: 6 LMKALAGIAVAVSWVALAGPVLADSRVDAIRQTGTITLGHPETSVPFAYLDGNQKPVGYT 65 Query: 61 VDFCRALSSAIFD----DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 V+ C ++ I I+Y P + R L + ID+ NT + R + Sbjct: 66 VEICEKIAGEIKSALNLPKLDIRYNPTTSATRIPLLANGTIDLECGNTTNNVER--HKLV 123 Query: 117 AFRPITYFDGQGFIMHKKKGI--SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 AF P T+ + K G+ ++ + G +I QAG T ++ N Sbjct: 124 AFAPTTFVAQVVLMARKDGGVDVNNPASFRGKTIAAQAGGQTFKVISQINAKGNYGITVA 183 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + E R D Y ++ P +I + +P + D Sbjct: 184 GAKDTGEAFLMVETGRAAGTANDDGLAYGQVASSKTPDAFIIGTKSLEIAPYGIMEPKDD 243 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 E+ +V ++ + G ++ P Sbjct: 244 PEFKKLVDDAVLKLI---KDGTVAALYDKYFNAPIPP 277 >gi|302524588|ref|ZP_07276930.1| glutamate-binding protein [Streptomyces sp. AA4] gi|302433483|gb|EFL05299.1| glutamate-binding protein [Streptomyces sp. AA4] Length = 276 Score = 163 bits (412), Expect = 4e-38, Method: Composition-based stats. Identities = 56/277 (20%), Positives = 98/277 (35%), Gaps = 13/277 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILG----DIKKRGFLKCGINTGLVGFAEVKANGDW 56 M V+ L L++ + S+ S + L GI G ++ +G Sbjct: 1 MRIRALVAALFLLVSCVSCGSSTVSKDDPLPTRARDGNHLTIGIRFDAPGLSQRTVDGRL 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFDVD ++ + +P +I + R L S +D++ T R+ + Sbjct: 61 AGFDVDVATFVARELGVEPDRITWHETTPARRETDLTSGAVDLVVATYSITDKRKQRVSF 120 Query: 117 AFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 A + GQ ++ I+ L+G +C G+T + D F + Sbjct: 121 A--GPYFVTGQDLLVRLTSPDITGPESLNGKRLCSVTGSTPAQMVKDKFAQM---VKLVE 175 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + R + A A++ DA T D L P ++ S + +GDT Sbjct: 176 YPRYPDCVTALLANQVDAVTTDAVILAGYAAQ--NPELLKVVGRPFSAERYGIGLRKGDT 233 Query: 236 EWYNIVSWTHYAMVTAEELGIT-QKNINQVSKDTTNP 271 E + V MV+ + + NI + NP Sbjct: 234 EGQHAVDDAIRKMVSTGAWRKSLEANIGPSNYPLPNP 270 >gi|22124840|ref|NP_668263.1| solute-binding protein of ABC transporter [Yersinia pestis KIM 10] gi|45440527|ref|NP_992066.1| putative amino acid ABC transporter periplasmic protein [Yersinia pestis biovar Microtus str. 91001] gi|108808739|ref|YP_652655.1| putative amino acid ABC transporter periplasmic protein [Yersinia pestis Antiqua] gi|108811004|ref|YP_646771.1| amino acid ABC transporter, periplasmic protein [Yersinia pestis Nepal516] gi|145600152|ref|YP_001164228.1| amino acid ABC transporter, periplasmic protein [Yersinia pestis Pestoides F] gi|149364902|ref|ZP_01886937.1| putative amino acid ABC transporter, periplasmic protein [Yersinia pestis CA88-4125] gi|165926628|ref|ZP_02222460.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165936051|ref|ZP_02224621.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia pestis biovar Orientalis str. IP275] gi|166011108|ref|ZP_02232006.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166212982|ref|ZP_02239017.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167398531|ref|ZP_02304055.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421596|ref|ZP_02313349.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423593|ref|ZP_02315346.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167468796|ref|ZP_02333500.1| amino acid ABC transporter, periplasmic protein [Yersinia pestis FV-1] gi|218930282|ref|YP_002348157.1| putative amino acid ABC transporter periplasmic protein [Yersinia pestis CO92] gi|229838868|ref|ZP_04459027.1| putative amino acid ABC transporter, periplasmic protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229896361|ref|ZP_04511530.1| putative amino acid ABC transporter, periplasmic protein [Yersinia pestis Pestoides A] gi|229899437|ref|ZP_04514580.1| putative amino acid ABC transporter, periplasmic protein [Yersinia pestis biovar Orientalis str. India 195] gi|229901223|ref|ZP_04516345.1| putative amino acid ABC transporter, periplasmic protein [Yersinia pestis Nepal516] gi|270489411|ref|ZP_06206485.1| bacterial extracellular solute-binding protein, family 3 [Yersinia pestis KIM D27] gi|294504973|ref|YP_003569035.1| putative amino acid ABC transporter, periplasmic protein [Yersinia pestis Z176003] gi|21957669|gb|AAM84514.1|AE013696_7 putative solute-binding protein of ABC transporter [Yersinia pestis KIM 10] gi|45435384|gb|AAS60943.1| putative amino acid ABC transporter, periplasmic protein [Yersinia pestis biovar Microtus str. 91001] gi|108774652|gb|ABG17171.1| amino acid ABC transporter, periplasmic protein [Yersinia pestis Nepal516] gi|108780652|gb|ABG14710.1| putative amino acid ABC transporter, periplasmic protein [Yersinia pestis Antiqua] gi|115348893|emb|CAL21850.1| putative amino acid ABC transporter, periplasmic protein [Yersinia pestis CO92] gi|145211848|gb|ABP41255.1| amino acid ABC transporter, periplasmic protein [Yersinia pestis Pestoides F] gi|149291315|gb|EDM41389.1| putative amino acid ABC transporter, periplasmic protein [Yersinia pestis CA88-4125] gi|165916196|gb|EDR34803.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia pestis biovar Orientalis str. IP275] gi|165921556|gb|EDR38753.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165990108|gb|EDR42409.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166205769|gb|EDR50249.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166960515|gb|EDR56536.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051035|gb|EDR62443.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057763|gb|EDR67509.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229681152|gb|EEO77246.1| putative amino acid ABC transporter, periplasmic protein [Yersinia pestis Nepal516] gi|229687839|gb|EEO79912.1| putative amino acid ABC transporter, periplasmic protein [Yersinia pestis biovar Orientalis str. India 195] gi|229695234|gb|EEO85281.1| putative amino acid ABC transporter, periplasmic protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700637|gb|EEO88667.1| putative amino acid ABC transporter, periplasmic protein [Yersinia pestis Pestoides A] gi|262363037|gb|ACY59758.1| putative amino acid ABC transporter, periplasmic protein [Yersinia pestis D106004] gi|262366961|gb|ACY63518.1| putative amino acid ABC transporter, periplasmic protein [Yersinia pestis D182038] gi|270337915|gb|EFA48692.1| bacterial extracellular solute-binding protein, family 3 [Yersinia pestis KIM D27] gi|294355432|gb|ADE65773.1| putative amino acid ABC transporter, periplasmic protein [Yersinia pestis Z176003] gi|320016446|gb|ADW00018.1| putative amino acid ABC transporter, periplasmic protein [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 262 Score = 163 bits (412), Expect = 4e-38, Method: Composition-based stats. Identities = 46/262 (17%), Positives = 100/262 (38%), Gaps = 13/262 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K L +++ + + A L I++RG L+ + F V + +G+D+ Sbjct: 4 KKRMLW--LWAVLVLVQAPAVLADQLEKIQQRGVLRVAVPQDFPPFGSVGTDLQPQGYDI 61 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D + L+ + K+Q + + + R LQ+ ++D++ + RE ++ + Sbjct: 62 DMAQYLADKM---KLKLQLVSVTSANRVPYLQTDKVDLVISSLGKNPEREKAIAFSRAYA 118 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 +F G K + QL+G +I V G ++ L++ +E Sbjct: 119 PFF--LGVFGAKDDELKQPEQLAGKTIGVTRGAVEDMVLSEIAPKAA---QIRRYEDNNT 173 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +AY + + + + AL P + + ++ SP + QG+ V Sbjct: 174 TLSAYLSGQVNYLATGNLVISALARQ--NPKQAPVAKFMLKDSPCYIGLRQGEPALKAKV 231 Query: 242 SWTHYAMVTAEEL-GITQKNIN 262 + L G+++K + Sbjct: 232 DALIGDALQDNTLNGLSEKWLK 253 >gi|288936965|ref|YP_003441024.1| extracellular solute-binding protein family 3 [Klebsiella variicola At-22] gi|330005632|ref|ZP_08305310.1| ABC transporter, substrate-binding protein, family 3 [Klebsiella sp. MS 92-3] gi|288891674|gb|ADC59992.1| extracellular solute-binding protein family 3 [Klebsiella variicola At-22] gi|328536198|gb|EGF62579.1| ABC transporter, substrate-binding protein, family 3 [Klebsiella sp. MS 92-3] Length = 279 Score = 163 bits (412), Expect = 5e-38, Method: Composition-based stats. Identities = 48/277 (17%), Positives = 101/277 (36%), Gaps = 16/277 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59 M + ++ L S + A +L DI RG LKC + + + F+ G Sbjct: 1 MKLKRNAGLALVLTLVAVSGAARADMLADIHARGELKCAVYSDVPPFSAPDPKTRQLVGM 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DV+ C AL+ + K Q +P + + R + + + D+L N +T R + Sbjct: 61 DVELCHALAKQMG---VKAQLVPTSVEARIAIIATGRADVLIANLAYTKTRGRQIQF--S 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + ++ + +++ G I GTT+E ++ P+ F+ Sbjct: 116 DPYYVAKEMLLVKEANADKTLADFKGKRISATKGTTSEQSIV------LKGGKPVTFQDA 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPS-EHVILPDIISKSPLAPAIIQGDTEWY 238 A ++ + + + + ++ + ++ P+ + QG+ + Sbjct: 170 ASAFLALEQNKVLGFVTNTMTGIKMIGQAKKDGINLAMIKEPMALEPIGVGMKQGEPQLL 229 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 V+ + M ++ G K N T + R Sbjct: 230 ASVNESLKVM---DDDGTIDKIWNTWIGPNTEYKMVR 263 >gi|224282754|ref|ZP_03646076.1| ABC-type amino acid transport system periplasmic component [Bifidobacterium bifidum NCIMB 41171] Length = 284 Score = 163 bits (412), Expect = 5e-38, Method: Composition-based stats. Identities = 45/242 (18%), Positives = 91/242 (37%), Gaps = 11/242 (4%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 + G ++ GI G K +G + GFDVD + ++ + +I + +K+R Sbjct: 40 ESGKIRIGIKFDQPGLGF-KKSGTYVGFDVDVAKYVAKKLGYSEDEIVWKEAPSKQREAM 98 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICV 150 LQ+ +D++ T R+ ++ A + GQ ++ K I+ L+G +C Sbjct: 99 LQNGDVDMILATYSITDERKNAVSFA--GPYFVAGQDLLVRKDDHSINGPEDLNGKRLCS 156 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 G+T+ T+ F + + E A + DA T D L L + Sbjct: 157 VTGSTSAATVKKKFASE---VQLMEQPGYAECATALFSGIVDAVTTDDIILAGLASASR- 212 Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 + ++ ++ I +GDT ++ M+ + + + Sbjct: 213 -GKLRVVGKPFTQEYYGVGIKKGDTALAKKINAAIAEMIKDGSWE--RAIADNTEGTSYT 269 Query: 271 PD 272 P+ Sbjct: 270 PN 271 >gi|308177955|ref|YP_003917361.1| glutamate ABC transporter substrate-binding protein GluB [Arthrobacter arilaitensis Re117] gi|307745418|emb|CBT76390.1| glutamate ABC transporter, substrate-binding protein GluB [Arthrobacter arilaitensis Re117] Length = 276 Score = 163 bits (412), Expect = 5e-38, Method: Composition-based stats. Identities = 42/234 (17%), Positives = 86/234 (36%), Gaps = 10/234 (4%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 ++ GI G + ++ GFDVD + ++ + +I+++ + R LQ+ Sbjct: 35 KIRIGIKYDQPGLGFKDGD-NYTGFDVDVAKYVAGELGYTEDQIEFISAPSANRETMLQN 93 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 Q+D++ T R + A + GQ ++ I L G ++C G+ Sbjct: 94 DQVDMIFATYSITDERNKVVDFA--GPYFVAGQDLLVPNDSDIKGPEDLDGKNLCSVTGS 151 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T+ + D + + + E DA T D L L + Sbjct: 152 TSAQKVKDNYAKNT---NLQELPGYAECTTQMSGGTIDAVTTDDIILAGLAAQPAYQGKF 208 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 ++ S+ + G + +I + A+ E G QK +++ ++ T Sbjct: 209 KVVGAPFSEENYGVGLPDGTDKCADI----NAAITKMIESGEWQKALDKNTEGT 258 >gi|171320700|ref|ZP_02909714.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MEX-5] gi|171094060|gb|EDT39156.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MEX-5] Length = 317 Score = 162 bits (411), Expect = 6e-38, Method: Composition-based stats. Identities = 54/246 (21%), Positives = 92/246 (37%), Gaps = 13/246 (5%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALS 68 + ++ F+ + S L I +R + G+ F + A GF+VD ++ Sbjct: 53 VAALLSAFSGVARADSTLDRIHQRHKITIGVILSGPPFGSLDPATQKPVGFNVDLANDVA 112 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD-GQ 127 + D ++ P+ R LQ ++D L N + T R + L++ P + G Sbjct: 113 KRLGVD---VELTPVQPSNRVQFLQQGKVDALIANMELTKER--AEILSYAPTPFESIGG 167 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 I K GI S + L G +CV G+ LA + A F E A R Sbjct: 168 ALIARKDSGIKSWADLRGKPVCVSQGSNYTKPLATEYGAQ-----VKAFRGQPESLLALR 222 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEH-VILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + C A L L N ++ +LP + SP + +G+T+ N + Sbjct: 223 GNNCVAAVHVAPTLRMLVARNPDWKDYTTLLPTDLIPSPAVIWVRKGETDTQNALDRIVQ 282 Query: 247 AMVTAE 252 + Sbjct: 283 DWHRSG 288 >gi|297160476|gb|ADI10188.1| putative ABC transporter solute-binding protein [Streptomyces bingchenggensis BCW-1] Length = 338 Score = 162 bits (411), Expect = 6e-38, Method: Composition-based stats. Identities = 51/267 (19%), Positives = 93/267 (34%), Gaps = 31/267 (11%) Query: 20 FSTNASILGDIKKR-------GFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAI 71 S + + IK R G L G++ + A GD GFD++ RA++ I Sbjct: 67 SSASGPAIQRIKNRKVDGHRLGKLIAGVDQNSYRWGYRDPATGDLTGFDIELVRAIAKDI 126 Query: 72 FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131 F DP + Y + +R ALQ ++DI+ R R + + + GQ ++ Sbjct: 127 FGDPDAVIYRAIPTSQRVKALQQGKVDIVVRTMTINCDRLKDVAFSTA--YFKAGQQVLV 184 Query: 132 HKKKGISSVS-QLSGASICVQAGTTTELTLADYFKAHNM--KYHPIVFERVEEIDAAYRA 188 K ++ + L G +C G+T E L + + + Sbjct: 185 PKGSSVTGYNTSLRGKKVCTAQGSTAEAELDKEKGGADDLGAIKVDPVPNQLDCLVRLQL 244 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH--- 245 + DA D + + ++ ++ A+ + D + V+ Sbjct: 245 GQVDAVITDNALAAGQAAQDPS---VKLVGKPFTEEFYGVAMNKDDEDLVRRVNKVLEGY 301 Query: 246 ------------YAMVTAEELGITQKN 260 Y AE+LG T++N Sbjct: 302 RSGGDNSPWMRAYRKWLAEDLGRTEEN 328 >gi|227431443|ref|ZP_03913492.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227352809|gb|EEJ42986.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 288 Score = 162 bits (411), Expect = 6e-38, Method: Composition-based stats. Identities = 55/273 (20%), Positives = 107/273 (39%), Gaps = 22/273 (8%) Query: 5 FFVSILCLIILFFTSFST----NASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 +++ L +L+ T+ + + L ++K G + G+ + F + G KGF Sbjct: 16 VLAAVIVLGLLWATTAAKKNEEHQDTLQRVEKLGRIIWGVKSDTKLFGLMDTKTGVSKGF 75 Query: 60 DVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 DVD +AL+ I P +++P+++ + L++ ID T RE ++ Sbjct: 76 DVDIAKALTVQISKQTGVPMSAEFVPVSSSSKIQLLKNTNIDGTVSTMTITPEREKNIDF 135 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPI 174 + + GQ ++ K GI S+ ++ + I V GTT + + Sbjct: 136 TNQ--YFDAGQSILVKKDSGIKSIKDMNDSKYKIIVVVGTTAAEETKKFAPKA----KLL 189 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + A +A + A + D + LY N ++ I+ + P A Sbjct: 190 AVQDYATGMQALKAGQGQAMSTDNAILYGFATENP---DYQIVGGTFTHGPYGIAFDNNQ 246 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 +V T+ A+ T ++ G K I + D Sbjct: 247 GP---MVRETNKALATIKKNGTYNKLIKKWFSD 276 >gi|296132709|ref|YP_003639956.1| extracellular solute-binding protein family 3 [Thermincola sp. JR] gi|296031287|gb|ADG82055.1| extracellular solute-binding protein family 3 [Thermincola potens JR] Length = 260 Score = 162 bits (411), Expect = 6e-38, Method: Composition-based stats. Identities = 58/266 (21%), Positives = 104/266 (39%), Gaps = 16/266 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNASI----LGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 K F +SIL L +LF T A+ D+K K G + F V +G+ +G Sbjct: 6 KIFVLSILALSLLFAVGCGTKATTEESKGEDVK---TYKVGTDAAYAPFESVAPSGEIEG 62 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD RA++ A + +++++ + F +L+ Q DI+ T R+ + + Sbjct: 63 FDVDIMRAIAKA---EGFEVEFVNTAWEGIFASLK-GQNDIVISAVTITDDRKKEMDFSE 118 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + + K I+S++ L G + VQ GTT + L + F+ Sbjct: 119 --PYFESTNYIAVPKDSNIASLNDLKGKVVAVQEGTTGDEALTKFLGKDYRNIK--RFKG 174 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E R + DA D + N + ++ + K A+ +G+TE Sbjct: 175 TPEAFLELRNGKADAAVADSGVVANYVKNNPDANLKIVKDETFPKEYYGIAVAKGNTELL 234 Query: 239 NIVSWTHYAMVTAEEL-GITQKNINQ 263 ++ + E I K ++ Sbjct: 235 AKINSGLKKIKENGEYDKIYSKWFSE 260 >gi|291457470|ref|ZP_06596860.1| glutamate-binding protein [Bifidobacterium breve DSM 20213] gi|291381305|gb|EFE88823.1| glutamate-binding protein [Bifidobacterium breve DSM 20213] Length = 279 Score = 162 bits (411), Expect = 6e-38, Method: Composition-based stats. Identities = 47/244 (19%), Positives = 96/244 (39%), Gaps = 15/244 (6%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 G ++ GI G K +G + GFDVD + ++ + +I + +K+R +Q Sbjct: 36 GKIRIGIKFDQPGLGF-KKSGTYVGFDVDVAKYIAKKLGYSEDEIIWKEAPSKQREAMIQ 94 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQA 152 + +D++ T R+ ++ A + GQ ++ K I+ L+G +C Sbjct: 95 NGDVDMILATYSITDERKKAVSFA--GPYFVAGQDLLVRKDDNSINGPEDLNGKRLCSVT 152 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 G+T+ T+ + F + + E A + DA T D L L + Sbjct: 153 GSTSAATVKEKFASE---VQLMEQPGYAECATALFSGIVDAVTTDDIILAGLASASR--G 207 Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT--AEELGITQKNINQVSKDTTN 270 + ++ ++ I +G+T+ ++ M+ + E I+ + Sbjct: 208 KLKVVGKPFTQEYYGVGIKKGNTQLATKINNAIVDMIQDGSWENAIS----DNTKGTNYT 263 Query: 271 PDVQ 274 PDV+ Sbjct: 264 PDVR 267 >gi|298290460|ref|YP_003692399.1| extracellular solute-binding protein family 3 [Starkeya novella DSM 506] gi|296926971|gb|ADH87780.1| extracellular solute-binding protein family 3 [Starkeya novella DSM 506] Length = 267 Score = 162 bits (411), Expect = 6e-38, Method: Composition-based stats. Identities = 43/245 (17%), Positives = 88/245 (35%), Gaps = 11/245 (4%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 +A L I+ ++ + F V A+ KG+DVD + ++ + K Sbjct: 25 APLPAHADALATIEANKVIRIAVPQDFPPFGTVGADMQPKGYDVDMAKLIADKMG---VK 81 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++ +P+ + R LQ+ ++D++ + RE + + +F+G + Sbjct: 82 LELVPVTSANRIPYLQTNKVDLVISSLGKNPDREKVIDFSAAYAPFFNG--VFGPAEVAA 139 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 LSG ++ V G +L L A +E +A+ + + D Sbjct: 140 KDAKDLSGKTVGVTRGAVEDLELTKIAPA---DVTIKRYEDNNGTISAFLSGQVDLIATG 196 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL-GI 256 A+ P + + +I SP + + + V+ A L I Sbjct: 197 NVVAAAI--LERNPPKKPEIKFLIKNSPCFIGLNKNEPALLAKVNDIIAAARKDGALEAI 254 Query: 257 TQKNI 261 +QK + Sbjct: 255 SQKWL 259 >gi|162419996|ref|YP_001607785.1| amino acid ABC transporter periplasmic amino acid-binding protein [Yersinia pestis Angola] gi|162352811|gb|ABX86759.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia pestis Angola] Length = 262 Score = 162 bits (411), Expect = 6e-38, Method: Composition-based stats. Identities = 46/262 (17%), Positives = 100/262 (38%), Gaps = 13/262 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K L +++ + + A L I++RG L+ + F V + +G+D+ Sbjct: 4 KKRMLW--LWAVLVLVQAPAVLADQLEKIQQRGVLRVAVPQDFPPFGSVGTDLQPQGYDI 61 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D + L+ + K+Q + + + R LQ+ ++D++ + RE ++ + Sbjct: 62 DMAQYLADKM---KLKLQLVSVTSANRVPYLQTDKVDLVISSLGKNPEREKAIAFSRAYE 118 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 +F G K + QL+G +I V G ++ L++ +E Sbjct: 119 PFF--LGVFGAKDDELKQPEQLAGKTIGVTRGAVEDMVLSEIAPKAA---QIRRYEDNNT 173 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +AY + + + + AL P + + ++ SP + QG+ V Sbjct: 174 TLSAYLSGQVNYLATGNLVISALARQ--NPKQAPVAKFMLKDSPCYIGLRQGEPALKAKV 231 Query: 242 SWTHYAMVTAEEL-GITQKNIN 262 + L G+++K + Sbjct: 232 DALIGDALQDNTLNGLSEKWLK 253 >gi|323706490|ref|ZP_08118050.1| extracellular solute-binding protein family 3 [Thermoanaerobacterium xylanolyticum LX-11] gi|323534152|gb|EGB23943.1| extracellular solute-binding protein family 3 [Thermoanaerobacterium xylanolyticum LX-11] Length = 258 Score = 162 bits (411), Expect = 6e-38, Method: Composition-based stats. Identities = 52/270 (19%), Positives = 103/270 (38%), Gaps = 17/270 (6%) Query: 1 MYKDFFVSILCLIILFFT-SFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56 M K +S++ + I+ S + S L +KK G + G + F V Sbjct: 1 MKKRLIISLILVTIMSIALSGCSKQSTLSRVKKSGVIVMGTSADFPPFEFHKVVNGKDTI 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFDVD A++ + K++ ++ ALQS QID+ + T R+ ++ Sbjct: 61 MGFDVDLANAIAKKLG---VKLEIKDMDFTGLIPALQSGQIDMAIAGMNATPERKKNVDF 117 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + Y Q ++ I++++ L G ++ VQ GTT+ D Sbjct: 118 SDE--YYNSEQVLVVKNSSNINNLNDLKGKTVAVQLGTTS-----DDAAKKIKGIDIKEL 170 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 R+ + + R DA + + A I + + A+ +G+ Sbjct: 171 NRLGDAFLSLENGRVDAILMESTIADAYLKEYKDMKMLHIKEINEAVPGYSVAVAKGNQ- 229 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSK 266 ++V+ + + ++ G +K +N+ Sbjct: 230 --DLVNQINSVIKDLKDSGEYEKMLNKWMG 257 >gi|310287212|ref|YP_003938470.1| Glutamate-binding protein GluB [Bifidobacterium bifidum S17] gi|311064072|ref|YP_003970797.1| Glutamate-binding protein GluB [Bifidobacterium bifidum PRL2010] gi|309251148|gb|ADO52896.1| Glutamate-binding protein GluB [Bifidobacterium bifidum S17] gi|310866391|gb|ADP35760.1| Glutamate-binding protein GluB [Bifidobacterium bifidum PRL2010] Length = 279 Score = 162 bits (411), Expect = 7e-38, Method: Composition-based stats. Identities = 45/242 (18%), Positives = 91/242 (37%), Gaps = 11/242 (4%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 + G ++ GI G K +G + GFDVD + ++ + +I + +K+R Sbjct: 35 ESGKIRIGIKFDQPGLGF-KKSGTYVGFDVDVAKYVAKKLGYSEDEIVWKEAPSKQREAM 93 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICV 150 LQ+ +D++ T R+ ++ A + GQ ++ K I+ L+G +C Sbjct: 94 LQNGDVDMILATYSITDERKNAVSFA--GPYFVAGQDLLVRKDDHSINGPEDLNGKRLCS 151 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 G+T+ T+ F + + E A + DA T D L L + Sbjct: 152 VTGSTSAATVKKKFASE---VQLMEQPGYAECATALFSGIVDAVTTDDIILAGLASASR- 207 Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 + ++ ++ I +GDT ++ M+ + + + Sbjct: 208 -GKLRVVGKPFTQEYYGVGIKKGDTALAKKINAAIAEMIKDGSWE--RAIADNTEGTSYT 264 Query: 271 PD 272 P+ Sbjct: 265 PN 266 >gi|256380783|ref|YP_003104443.1| extracellular solute-binding protein family 3 [Actinosynnema mirum DSM 43827] gi|255925086|gb|ACU40597.1| extracellular solute-binding protein family 3 [Actinosynnema mirum DSM 43827] Length = 275 Score = 162 bits (411), Expect = 7e-38, Method: Composition-based stats. Identities = 54/255 (21%), Positives = 105/255 (41%), Gaps = 10/255 (3%) Query: 2 YKDFFVSILCLIILFFTSF--STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 Y+ ++I +L T+ S + S L G L GI L G ++ + +G++ GF Sbjct: 3 YRKLVMAITGSAVLAATAACGSADQSTLEGKADDGALTIGIRYDLPGMSQRRIDGEFVGF 62 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD + +++ P+ I + + +R + S ++D++ N T R+ +G A Sbjct: 63 DVDVAKYVAAQFDVQPAGITWREVRPADREKLIASGEVDLVVANYSITEPRKQQVGFA-- 120 Query: 120 PITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + GQG ++ ++ I+ LSG +C GTT+ + + F + + + Sbjct: 121 GPYFQTGQGLLVRATEEAITGTEALSGKKLCSVTGTTSAAKVKEEFAQ---DVELVEYGQ 177 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + A A + DA T D + L P ++ + + + + D Sbjct: 178 YSDCVTALLAEKVDAVTTDEAILTGF--VGQNPELLKLVGEPFTTERYGIGLAKDDAAGR 235 Query: 239 NIVSWTHYAMVTAEE 253 V+ MV+ E Sbjct: 236 GKVASAIEKMVSTGE 250 >gi|159184745|ref|NP_354406.2| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|159140033|gb|AAK87191.2| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 267 Score = 162 bits (410), Expect = 7e-38, Method: Composition-based stats. Identities = 59/260 (22%), Positives = 101/260 (38%), Gaps = 12/260 (4%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 + + + FT FS NA + DI KRG +K G+ G F V A G+ G+D D Sbjct: 8 KSVAAAIAVCAGIFTGFSANAQSVDDIVKRGSVKIGVLVGAPPFGSVDAQGNPVGYDADV 67 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 + + + +Q P R AL+S ++D L T R ++ + Sbjct: 68 ATLIGKYLGVPVTMVQLTP---PSRIPALESGKVDFLVATLAPTPERAKAVMFTNPYSAF 124 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 G HK I L G ++ V G++ E + + + + F+ Sbjct: 125 --QVGIYSHKDTKIEKWEDLKGMTVGVNRGSSVEREFVN--REKELGLTILRFDDDATTM 180 Query: 184 AAYRAHRCDAYTG-DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A + + A G D A A+KL D +E + S P + + + + + ++ Sbjct: 181 QALFSGQVQAIAGPDAQANAAIKLRGDTTTE---VKFFFSIQPNSMTVRKDAVDLHQWLN 237 Query: 243 WTHYAMVTAEEL-GITQKNI 261 T Y + EL I +K + Sbjct: 238 NTIYYIKQNGELDAIARKWV 257 >gi|313139914|ref|ZP_07802107.1| glutamate-binding protein of ABC transporter system [Bifidobacterium bifidum NCIMB 41171] gi|313132424|gb|EFR50041.1| glutamate-binding protein of ABC transporter system [Bifidobacterium bifidum NCIMB 41171] Length = 279 Score = 162 bits (410), Expect = 7e-38, Method: Composition-based stats. Identities = 45/242 (18%), Positives = 91/242 (37%), Gaps = 11/242 (4%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 + G ++ GI G K +G + GFDVD + ++ + +I + +K+R Sbjct: 35 ESGKIRIGIKFDQPGLGF-KKSGTYVGFDVDVAKYVAKKLGYSEDEIVWKEAPSKQREAM 93 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICV 150 LQ+ +D++ T R+ ++ A + GQ ++ K I+ L+G +C Sbjct: 94 LQNGDVDMILATYSITDERKNAVSFA--GPYFVAGQDLLVRKDDHSINGPEDLNGKRLCS 151 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 G+T+ T+ F + + E A + DA T D L L + Sbjct: 152 VTGSTSAATVKKKFASE---VQLMEQPGYAECATALFSGIVDAVTTDDIILAGLASASR- 207 Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 + ++ ++ I +GDT ++ M+ + + + Sbjct: 208 -GKLRVVGKPFTQEYYGVGIKKGDTALAKKINAAIAEMIKDGSWE--RAIADNTEGTSYT 264 Query: 271 PD 272 P+ Sbjct: 265 PN 266 >gi|317402646|gb|EFV83204.1| solute-binding protein [Achromobacter xylosoxidans C54] Length = 275 Score = 162 bits (410), Expect = 7e-38, Method: Composition-based stats. Identities = 50/287 (17%), Positives = 107/287 (37%), Gaps = 15/287 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59 M + + + + +A L DIK RG CG F+ G+ Sbjct: 1 MKHWIITCAAAIGLAATLAPAAHADTLQDIKARGKFICGTMGTAEPFSFQDPKTRAIVGY 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 +VD C+A++ ++ P +++ + + A R L + ++D+++ N W+ R + + + Sbjct: 61 EVDMCQAVADSLGV-PLELKLIAVEA--RIPELIAGRVDVVAANLGWSPERAQQIDYSHQ 117 Query: 120 PITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + Q + + K + + + L+G + G+++E + P+ F+ Sbjct: 118 --HFVSLQKVLARESDKDLKAPADLAGKRVSAVRGSSSEQGARKFIP----NVEPVTFKD 171 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE-HVILPDIISKSPLAPAIIQGDTEW 237 A + + + G L LK + IL + P + +GDT Sbjct: 172 PSGAFLALQQGKVSGFVGSELMLVKLKQQAASSAVPAKILEPALFVEPWGMGVRRGDTAM 231 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSN 284 N V+ E G + ++ T +++R I+ Sbjct: 232 LNQVNKVLDG---LEASGKATQIFDKWFGAGTPFNMKRDFRIEAIKG 275 >gi|300718324|ref|YP_003743127.1| extracellular solute-binding protein [Erwinia billingiae Eb661] gi|299064160|emb|CAX61280.1| extracellular solute-binding protein [Erwinia billingiae Eb661] Length = 279 Score = 162 bits (410), Expect = 7e-38, Method: Composition-based stats. Identities = 49/277 (17%), Positives = 100/277 (36%), Gaps = 16/277 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59 M + + L S A L DI+ RG L C + + + F+ G Sbjct: 1 MKLKLLSCSVLALPLMMAFSSAKADALSDIQARGQLNCAVYSDVPPFSSPDPKTRQLVGM 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD C AL+ + K+ +P + + R + + + D+L N +T R + Sbjct: 61 DVDLCTALAQQMG---LKLNLMPTSIEARIAVIATGRADVLIANLAYTKTRGKQIQF--S 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + ++ K + + G I GTT+E ++ H + F+ Sbjct: 116 DPYYVAKEMLVVKKPDVDKTKADFKGKRISATKGTTSEQSI------HLAGAKAVTFQDA 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPS-EHVILPDIISKSPLAPAIIQGDTEWY 238 A ++ + + + + E ++ + ++ P+ + QG+ Sbjct: 170 ASAFLALEQNKAVGFVTNTMTGIKMITQAGKDGIELGMIKEPMALEPIGIGMKQGEPALL 229 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 V+ + AM ++ G K ++ T+ + R Sbjct: 230 TKVNTSLKAM---DDDGTIDKIWDKWIGPNTDYKMVR 263 >gi|302390116|ref|YP_003825937.1| extracellular solute-binding protein family 3 [Thermosediminibacter oceani DSM 16646] gi|302200744|gb|ADL08314.1| extracellular solute-binding protein family 3 [Thermosediminibacter oceani DSM 16646] Length = 278 Score = 162 bits (410), Expect = 7e-38, Method: Composition-based stats. Identities = 56/285 (19%), Positives = 101/285 (35%), Gaps = 35/285 (12%) Query: 3 KDFFVSILCL-----IILFFTSFSTNA------------SILGDIKKRGFLKCGINTGLV 45 K FF+++ L +L T A + IKK G L G + Sbjct: 4 KKFFLTLFILVFITAAVLGVTGCGQKASQDAGSSQVEQQDTVDKIKKAGKLVIGTSADYP 63 Query: 46 GFAEVKANG---DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102 F + G + GFD+D +A++ + D ++ + + A+ SK +D+ Sbjct: 64 PFEFHQVTGGKDEIVGFDIDIAKAIAKELGVD---LEIKDMAFESIIPAVLSKTVDLGIA 120 Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162 T R S+ GQ I +K G+ S L+G +I VQ GTT E Sbjct: 121 GFTITEERLKSVNF--SDPYIDGGQQIITYKGSGVKSKEDLNGKTIGVQLGTTGEE---- 174 Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222 F++V R +A D+ A + P + + + + Sbjct: 175 -IAKKIEGAKLKQFDKVGAAVLDLMNKRVEAVIVDLPV--AQAFVTNNPDKLELAGEPLD 231 Query: 223 KSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 + A I + D + ++V+ + + E + + + D Sbjct: 232 DAAKAVVIRKEDQKLLDVVNKVIKDLKDSGE---YDRLVKEWFVD 273 >gi|71733916|ref|YP_272590.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71554469|gb|AAZ33680.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 320 Score = 162 bits (410), Expect = 7e-38, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 89/249 (35%), Gaps = 11/249 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 + +A+ L D+ RG LK + F V + +G D+D + L+ + Sbjct: 76 MLSQTPAHANGLDDVVARGTLKVAVPQDFPPFGSVGPDMKPRGLDIDTAQLLADQL---K 132 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 K++ P+N+ R L + ++D++ + RE + + ++ Sbjct: 133 VKLELTPVNSTNRIPFLTTGKVDLVISSLGKNPDREKVIDFSRAYAPFY--LAVFGPPDS 190 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 + ++ L G +I V G ++ L+ FE AAY A + D Sbjct: 191 PVKDIADLKGKTISVTRGAIEDIELSKVAPE---GATIKRFEDNNSTIAAYLAGQTDLIA 247 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL- 254 + A+ + P L + SP+ + +G E V A L Sbjct: 248 SGNVVMVAI--SERNPKRIPALKVKLKDSPVYVGVNKGQPELLGKVDEILNAAKADGALE 305 Query: 255 GITQKNINQ 263 +QK + Q Sbjct: 306 KASQKWLKQ 314 >gi|75909655|ref|YP_323951.1| extracellular solute-binding protein [Anabaena variabilis ATCC 29413] gi|75703380|gb|ABA23056.1| amino acid ABC transporter substrate-binding protein, PAAT family [Anabaena variabilis ATCC 29413] Length = 271 Score = 162 bits (410), Expect = 8e-38, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 99/248 (39%), Gaps = 12/248 (4%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 +I+ ++ T + +A+ L +I++RG++ + L A G+ +G ++D Sbjct: 17 ILSAIIICWMISATGLAASAAELPEIQRRGYITVAVKDNLPLLGFKDAQGNLQGLEIDLA 76 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 + L++ + ++ P+N ++R + + Q+D+ T R + Y Sbjct: 77 KRLAADLLGKADAVKLQPVNNRDRLPVVFNHQVDLAIARVTATESRSRLVSF--SVPYYM 134 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 DG I K + ++ L+ I V ++T + Y + + +E A Sbjct: 135 DGTYLIT-KDVSVQQINDLATRKIAVLNNSSTIAEVRYYIPSA----ELVGVNSYQEAQA 189 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ--GDTEWYNIVS 242 A + A+ D S L N ++ +LP +S +PL+ + + E V+ Sbjct: 190 AIENNSVAAFAADGSLLSGWVRDNP---QYRLLPTKLSTAPLSVVMPKGLQYDELRREVN 246 Query: 243 WTHYAMVT 250 + + Sbjct: 247 EAIASYIA 254 >gi|116671348|ref|YP_832281.1| extracellular solute-binding protein [Arthrobacter sp. FB24] gi|116611457|gb|ABK04181.1| amino acid ABC transporter substrate-binding protein, PAAT family [Arthrobacter sp. FB24] Length = 294 Score = 162 bits (410), Expect = 8e-38, Method: Composition-based stats. Identities = 44/262 (16%), Positives = 92/262 (35%), Gaps = 19/262 (7%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 S + + K G +K G F +V +G GFDV+ + +++ + KI++ Sbjct: 45 AAGSTMEKLSKAGSIKIGTKFDQPLFGQVGLDGKPIGFDVEMGKLIAAKLGIPADKIEWS 104 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSV 140 + R ++ ++D++ R+ + A Y GQ +++K I Sbjct: 105 ETVSANREPFIEQGKVDLVIATYTINDKRKQVVSFA--GPYYEAGQALMVNKDNDTIKKP 162 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + G +C G+T T+ + + A + R + +A T D Sbjct: 163 EDVKGKKVCSVTGSTPAATIVEKYGA-----ELVPAATYSACLEPLRNKQVEAITTDNVI 217 Query: 201 LYALKLTNDRPSEHVIL-PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L + P + + +K P + + DT + +W + + G +K Sbjct: 218 LAGF--VDKEPEAFKLASDETFTKEPYGIGLKKDDTVFR---NWINDQLEEFSRDGSYKK 272 Query: 260 NINQVSKDTTN-----PDVQRF 276 + P + R+ Sbjct: 273 AWEATAGSVIKTAPELPAIDRY 294 >gi|309805517|ref|ZP_07699562.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners LactinV 09V1-c] gi|312871455|ref|ZP_07731549.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners LEAF 3008A-a] gi|312874443|ref|ZP_07734473.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners LEAF 2052A-d] gi|312874522|ref|ZP_07734547.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners LEAF 2053A-b] gi|325911806|ref|ZP_08174210.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners UPII 143-D] gi|329920213|ref|ZP_08277025.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners SPIN 1401G] gi|308165168|gb|EFO67406.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners LactinV 09V1-c] gi|311089913|gb|EFQ48332.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners LEAF 2053A-b] gi|311090055|gb|EFQ48469.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners LEAF 2052A-d] gi|311092975|gb|EFQ51325.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners LEAF 3008A-a] gi|325476312|gb|EGC79474.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners UPII 143-D] gi|328936434|gb|EGG32880.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners SPIN 1401G] Length = 273 Score = 162 bits (410), Expect = 8e-38, Method: Composition-based stats. Identities = 37/257 (14%), Positives = 92/257 (35%), Gaps = 13/257 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSK 77 + ++ +K+ + G F + + GF++D +A++ + + Sbjct: 24 GQAKKVNVYQKVKQSRTMIWGTRADTRLFGYMDIKSSKIIGFEIDMAKAVTKQMLGKDAV 83 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 +++ K R L+++ I+ + T R+ + A G ++ I Sbjct: 84 AKFVQTTPKTRIPLLKNRNINAIWATMTITPERKKQVDFAR--PYIGAGASLLVPNNSKI 141 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 V QL+ + GTT + + ++ + +A +A + A T D Sbjct: 142 KDVHQLNNKKVLAVKGTTAVADIKKVAPKA----KVLEYDDYGQAFSALKAGQGVALTTD 197 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 L + ++ P H+I + P A+ +G E + ++ A ++ G Sbjct: 198 NCLLAGIA--SENPGFHLI-GKNYTNQPYGIAVDKGQDELRDHINKALLA---LKKNGTY 251 Query: 258 QKNINQVSKDTTNPDVQ 274 + + + +++ Sbjct: 252 HRLLVKWFDGIPGFNIK 268 >gi|296141428|ref|YP_003648671.1| extracellular solute-binding protein family 3 [Tsukamurella paurometabola DSM 20162] gi|296029562|gb|ADG80332.1| extracellular solute-binding protein family 3 [Tsukamurella paurometabola DSM 20162] Length = 326 Score = 162 bits (410), Expect = 8e-38, Method: Composition-based stats. Identities = 54/262 (20%), Positives = 96/262 (36%), Gaps = 13/262 (4%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRA 66 L L + + +I RG L GI+ G + G+ KGFD D Sbjct: 63 GTLSPSSLPPAGQMAPGTTMAEIFDRGRLVVGIDIGSNLLSFRDPITGEIKGFDADIAHQ 122 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 +++AIF DP+++ + L+ ER AL +D++ + T R + + Sbjct: 123 IAAAIFGDPNRVHFRILSTAERQQALIDGTVDVVVKTMSATCDRAKQVDF--SATYFIAQ 180 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 Q + + I++V LSG +C GTT+ + + I + + Sbjct: 181 QRILAPRGAPINTVGDLSGRRVCEVRGTTSLDRVRRLVPSA----TVIAADSWSDCLVML 236 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + + DA + D + L L + P+ V P + A I + + ++ Sbjct: 237 QQQQVDAVSTDDAILAGL--EDQDPNLTVTGPS-MGLEYYAVGIGKNRPDLVRFINGVLL 293 Query: 247 AMVTAEELGITQKNINQVSKDT 268 M G + NQ T Sbjct: 294 RMAF---DGTWMRLYNQWFAPT 312 >gi|239983304|ref|ZP_04705828.1| glutamate binding periplasmic protein [Streptomyces albus J1074] gi|291455131|ref|ZP_06594521.1| glutamate binding periplasmic protein [Streptomyces albus J1074] gi|291358080|gb|EFE84982.1| glutamate binding periplasmic protein [Streptomyces albus J1074] Length = 312 Score = 162 bits (410), Expect = 9e-38, Method: Composition-based stats. Identities = 46/251 (18%), Positives = 89/251 (35%), Gaps = 13/251 (5%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 + K RG L G E A G + GFD++ + + + + +++++ Sbjct: 60 ESPTWRKAKARGALVVGAKEDQPYLGEKDPAGGGYTGFDIEIAKMVGAHLGFAENRVRFT 119 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSV 140 + + R ALQ+ QID R+ +G A Y GQG ++ + I Sbjct: 120 TIASANRETALQNGQIDYYVGTYTINDNRKRLVGFA--GPYYVAGQGLLVRSDEEDIKGP 177 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L G +C AG+T + + + + ++ ++ DA T D + Sbjct: 178 EDLDGKRVCSAAGSTPYQRMQEEYPKA----VLVSYDTYSICVDNLLTYQVDAVTTDDAI 233 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L P E ++ S+ P +++ D + A+ E G + Sbjct: 234 LLGYAA--KVPEELKVVGKPFSEEPYGIGVLRSDNALRLAIDD---ALEEGERKGYWKAA 288 Query: 261 INQVSKDTTNP 271 + + P Sbjct: 289 YDATLGLSGVP 299 >gi|89091825|ref|ZP_01164780.1| putative ABC transporter periplasmic amino acid-binding protein [Oceanospirillum sp. MED92] gi|89083560|gb|EAR62777.1| putative ABC transporter periplasmic amino acid-binding protein [Oceanospirillum sp. MED92] Length = 275 Score = 162 bits (410), Expect = 9e-38, Method: Composition-based stats. Identities = 55/272 (20%), Positives = 99/272 (36%), Gaps = 11/272 (4%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 I + +S + A L ++ KRG L CG+ + GFDVD+ Sbjct: 5 KLAGIAASAIAVMASSVTAQADQLDEVIKRGTLNCGVVLDFPPMGYFDKDNKPAGFDVDY 64 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 C L++A+ K L L +R +L S + D++ +T TL R S+G + Sbjct: 65 CNDLAAALG---VKSNVLNLTWGDRIPSLVSGKTDVVIGSTSDTLERAKSVGF--TYPYF 119 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFERVEEI 182 I K I+S + L + GTT E Y + K + F+ + Sbjct: 120 VFKFQTISKKGTPINSFADLKNVKVGAALGTTYETEYLAYAEKMGWGKDNYTAFKSENDA 179 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-SPLAPAIIQGDTEWYNIV 241 + DA + + A KL +++V P + + + + + W N + Sbjct: 180 YLGLYQGKVDAIISTNTNI-ATKLQTKEFADYVAGPYVPNYDDVVGLIAKRSEVAWINYL 238 Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 + + + K+ N+ D+ Sbjct: 239 NLFLIHQIRDGNMN---KHYNKHFGSDAPADL 267 >gi|116619008|ref|YP_819379.1| amino acid ABC transporter periplasmic protein [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116097855|gb|ABJ63006.1| amino acid ABC transporter substrate-binding protein, PAAT family [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 288 Score = 162 bits (410), Expect = 9e-38, Method: Composition-based stats. Identities = 55/273 (20%), Positives = 106/273 (38%), Gaps = 22/273 (8%) Query: 5 FFVSILCLIILFFTSFST----NASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 +++ L +L+ T+ + + L ++K G + G+ + F + G KGF Sbjct: 16 VLAAVIVLGLLWATTAAKKNEEHQDTLQRVEKLGRIIWGVKSDTKLFGLMDTKTGVSKGF 75 Query: 60 DVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 DVD +AL+ I P +++P+++ + L++ ID T RE + Sbjct: 76 DVDIAKALTVQISKQTGVPMSAEFVPVSSSSKIQLLKNTNIDGTVSTMTITPEREKIIDF 135 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPI 174 + + GQ ++ K GI S+ ++ + I V GTT + + Sbjct: 136 TNQ--YFDAGQSILVKKDSGIKSIKDMNDSKYKIIVVVGTTAAEETKKFAPKA----KLL 189 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + A +A + A + D + LY N ++ I+ + P A Sbjct: 190 AVQDYATGMQALKAGQGQAMSTDNAILYGFATENP---DYQIVGGTFTHGPYGIAFDNNQ 246 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 +V T+ A+ T ++ G K I + D Sbjct: 247 GP---MVRETNKALATIKKNGTYNKLIKKWFSD 276 >gi|300783210|ref|YP_003763501.1| ABC transporter substrate-binding protein [Amycolatopsis mediterranei U32] gi|299792724|gb|ADJ43099.1| ABC transport system substrate-binding protein [Amycolatopsis mediterranei U32] Length = 276 Score = 161 bits (409), Expect = 9e-38, Method: Composition-based stats. Identities = 50/258 (19%), Positives = 90/258 (34%), Gaps = 12/258 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKR----GFLKCGINTGLVGFAEVKANGDW 56 M + + L++ S + R L GI G +E +G + Sbjct: 1 MRWRTLLGSVLLLVTASACGPAKVSPTDSLVTRASATDHLTIGIRFDAPGLSEHTVDGRF 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFDVD ++S + I + + R L S +D++ + T R+ + Sbjct: 61 VGFDVDVATFVASELGVSAKDITWRETTSATRETDLTSGAVDLVVASYSITDKRKQVVSF 120 Query: 117 AFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 A + GQ ++ + I+ L+G +C G+T + D + + Sbjct: 121 A--GPYFTTGQDLLVRRTSADIAGPEALNGRRLCSVTGSTPAQQVKDKYAQA---VQLVE 175 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + R + A A + DA T D L P I+ SK + + DT Sbjct: 176 YPRYSDCVTALLAGQIDAVTTDAVILAGYVAR--DPELLKIVGKPFSKESYGVGLRKDDT 233 Query: 236 EWYNIVSWTHYAMVTAEE 253 + V M+++ E Sbjct: 234 QGVAAVDDAIRKMISSGE 251 >gi|311740950|ref|ZP_07714776.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Corynebacterium pseudogenitalium ATCC 33035] gi|311303986|gb|EFQ80063.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Corynebacterium pseudogenitalium ATCC 33035] Length = 337 Score = 161 bits (409), Expect = 9e-38, Method: Composition-based stats. Identities = 45/241 (18%), Positives = 94/241 (39%), Gaps = 12/241 (4%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 DI KRG L G++ + A +GD +GF+VD R ++ IF DP+K+ + + + + Sbjct: 86 DIVKRGRLIVGVDRSNNLMSYRDAASGDVRGFEVDIAREIARDIFGDPNKVDFRFIESSD 145 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 R AL S +D++ R + RE + + ++ GI SV +G + Sbjct: 146 RVDALNSGAVDMIVRTMTISPERERDVAFSI--PYMSTQTRMLVLTNSGIKSVKDAAGKT 203 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 +C +T T+ ++ + +V + A + ++ D D + L + Sbjct: 204 LCGVGASTALETIREHAPKSD----ILVTRSWGDCLMALQLNQADGIVVDDALLSGMAAQ 259 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQ--GDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 + S I+ + + A+ + + ++ + + G + Sbjct: 260 D---SYTSIVGEPLETENYGVAVRRPSKQHDTRPLLRQVNSTLERIRRDGTWSSIFEEWL 316 Query: 266 K 266 Sbjct: 317 G 317 >gi|254250731|ref|ZP_04944050.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Burkholderia cenocepacia PC184] gi|124879865|gb|EAY67221.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Burkholderia cenocepacia PC184] Length = 320 Score = 161 bits (409), Expect = 9e-38, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 93/259 (35%), Gaps = 12/259 (4%) Query: 2 YKDFFVSILCL-IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + ++ +I F + +A L I K G L+ + F V + +G+D Sbjct: 62 RRTWLAALFAAPVIALFAAAPAHADALDTIAKNGTLRVAVPEDYPPFGSVGTDMQPQGYD 121 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D L+ ++ K++ +P+N+ R L + ++D++ + T RE + + Sbjct: 122 IDMAGLLAKSLG---VKLKLVPVNSANRIPYLTTNKVDMVISSLGKTPEREKVIDFSSAY 178 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 YF QG +S+ + L+G ++ G E+ L+ +K FE Sbjct: 179 APYF--QGVFGPSDVKVSTPADLTGKTVGATRGALEEIALSQLAPNATIK----RFEDNN 232 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A+ + + A+ P + +I SP + + + Sbjct: 233 ATIQAFLSGQVQLIAAGNIVAAAILA--KNPPRRPEVKFVIKNSPCFVGVNKNEPRLLAK 290 Query: 241 VSWTHYAMVTAEELGITQK 259 + LG + Sbjct: 291 IDDAIAHAKQDGSLGEMSR 309 >gi|118586387|ref|ZP_01543836.1| glutamine ABC transporter, glutamine-binding protein [Oenococcus oeni ATCC BAA-1163] gi|118433174|gb|EAV39891.1| glutamine ABC transporter, glutamine-binding protein [Oenococcus oeni ATCC BAA-1163] Length = 287 Score = 161 bits (409), Expect = 1e-37, Method: Composition-based stats. Identities = 51/277 (18%), Positives = 99/277 (35%), Gaps = 27/277 (9%) Query: 5 FFVSILCLIILFFTSFSTNA---------SILGDIKKRGFLKCGINTGLVGFAEVKAN-G 54 SI+ +++ F S +A +K+ G ++ G+ F + G Sbjct: 11 IISSIILTLLIIFGVVSASALAENNSKHVDTWERVKRLGKIRWGVKADTKLFGLMDTKTG 70 Query: 55 DWKGFDVDFCRALSSAIF---DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 +GFDVD +AL+ + P + + + + R L++ ID T RE Sbjct: 71 QPEGFDVDIAKALTVQLSKQSGVPMQADFTIVTSNTRIQLLKNANIDGFIATATITPERE 130 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG--ASICVQAGTTTELTLADYFKAHNM 169 + + + GQ ++ K GI S+ L+ ++I G+ + + + + Sbjct: 131 KVIDFSNS--YFKAGQSILVKKGSGIKSIKDLNNSKSTIIGVVGSNSVINVKKFAPKA-- 186 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + + AA +A + A T D LY L N + ++ + P A Sbjct: 187 --KVLALGDYGQAMAALKAGQGQALTTDNGILYGLATENPG---YTVVGGTFTSEPYGVA 241 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 E + A++ G K I + + Sbjct: 242 FDNNQPEMVKQTNKALKAIIA---NGTYNKLIKKWFR 275 >gi|317509500|ref|ZP_07967113.1| extracellular solute-binding protein, family 3 [Segniliparus rugosus ATCC BAA-974] gi|316252204|gb|EFV11661.1| extracellular solute-binding protein, family 3 [Segniliparus rugosus ATCC BAA-974] Length = 335 Score = 161 bits (409), Expect = 1e-37, Method: Composition-based stats. Identities = 45/226 (19%), Positives = 89/226 (39%), Gaps = 12/226 (5%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 L I RG L G++ G F+ A G+ KGFDV R ++ + DPS+++Y Sbjct: 79 GGRLDRILARGRLVVGLDQGTYPFSYRDTATGEMKGFDVAMAREIAGGMLGDPSRVEYRI 138 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 +++ R AL++ +D++ + T R + + + Q + +S + Sbjct: 139 ISSAGRTTALENDTVDLVVKTMSITCERAKDVTFSE--PYFETDQRVMAATNANATSFTD 196 Query: 143 ---LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L +++C GTT+ F + + A + DA T D S Sbjct: 197 RKILGESTVCAARGTTSIAQFHHLFPTA----KILGTTTWADCLVAIQQGSVDAITSDES 252 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 LY + P+ + + + + + +G+ E +++ Sbjct: 253 ILYGFY--DQDPNLYFLSAIQLGREVYGVGVHKGEEELQRVINGII 296 >gi|37522352|ref|NP_925729.1| glutamine-binding protein [Gloeobacter violaceus PCC 7421] gi|35213352|dbj|BAC90724.1| glutamine-binding protein [Gloeobacter violaceus PCC 7421] Length = 260 Score = 161 bits (409), Expect = 1e-37, Method: Composition-based stats. Identities = 47/244 (19%), Positives = 102/244 (41%), Gaps = 11/244 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M ++L + +L A+ L I +R +L G+ L G+ GF+ Sbjct: 1 MPAALRTAVLTVSLLALLQTVGAAAPLEAILQRRYLIVGVKENLYPLGFRDKRGELAGFE 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D R + A+F DP+ ++ +P+ ++R AL+ + +D++ N + R ++ +F Sbjct: 61 IDLARQFAEALFADPTAVKLVPVRNRDRLEALEKQHVDLVIANLSIGVPRARAVDFSF-- 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Q ++ ++ + ++S L + V +G++ E + + + + Sbjct: 119 PYLTVNQAVLLKRESTLRTLSDLERVRLAVLSGSSNERAIRAFLPGAG----LVPVASYQ 174 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ--GDTEWY 238 E A R D + D + L DRP+ + +L + S L+ A+ + + Sbjct: 175 EGVQALETGRADGFAADGTVLGGW--VQDRPA-YRLLSTELDTSGLSVAMPRGLQNDSLR 231 Query: 239 NIVS 242 V+ Sbjct: 232 RWVN 235 >gi|315037815|ref|YP_004031383.1| glutamine-binding protein precursor [Lactobacillus amylovorus GRL 1112] gi|312275948|gb|ADQ58588.1| glutamine-binding protein precursor [Lactobacillus amylovorus GRL 1112] gi|327183109|gb|AEA31556.1| glutamine-binding protein precursor [Lactobacillus amylovorus GRL 1118] Length = 272 Score = 161 bits (409), Expect = 1e-37, Method: Composition-based stats. Identities = 42/265 (15%), Positives = 94/265 (35%), Gaps = 13/265 (4%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIF 72 L ++ ++ + G+ F +G +GF++D +AL+ + Sbjct: 19 TLSACGNKGKQNVYQKVETSKHIVWGVRADTRLFGLTNVKSGKIEGFEMDLAKALTKQML 78 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 ++ A R L++ +D + T R + + G ++ Sbjct: 79 GKKGTASFVTTTANTRIPLLKNGNVDAVLATMTITPERAKQVTFTKA--YFPAGSSLLVP 136 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 I++V L+ ++ GTT D K + ++ + +A +A++ Sbjct: 137 NNSKITNVKDLNNKTVLAVKGTTAV----DDVHKSAPKARVLQYDDYGQAMSALKANQGV 192 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 A T D L + N + ++ + S +P A+ +G TE + ++ A+ E Sbjct: 193 ALTTDNGLLAGIAQENPG---YKLVGGVYSDAPYGIAVNKGQTEMADHIN---KALKELE 246 Query: 253 ELGITQKNINQVSKDTTNPDVQRFL 277 G + I + ++ L Sbjct: 247 ANGTYNRLIKKWFAGIPGFSLKGVL 271 >gi|304317592|ref|YP_003852737.1| extracellular solute-binding protein family 3 [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302779094|gb|ADL69653.1| extracellular solute-binding protein family 3 [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 258 Score = 161 bits (409), Expect = 1e-37, Method: Composition-based stats. Identities = 50/259 (19%), Positives = 98/259 (37%), Gaps = 14/259 (5%) Query: 1 MYKDFFVSILCLIILFF-TSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56 M K +S+ +++L S + S L +KK G + G + F V Sbjct: 1 MKKVLIISLSLIVMLSIILSGCSKQSTLSRVKKSGVIVMGTSADFPPFEFHKVVNGKDTI 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFDVD A++ + K++ ++ ALQS QID+ + T R+ ++ Sbjct: 61 MGFDVDLANAIAKKLG---VKLEIKDMDFTGLIPALQSGQIDMAIAGMNATPDRKKNVDF 117 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + Y Q ++ I+++ L+G ++ VQ GTT+ D + Sbjct: 118 SDE--YYNSEQVLVVKSSSSINNLKDLNGKTVAVQLGTTS-----DDAAKKIKGINLNEL 170 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 R+ + + R DA + + A + + + A+ +G+ + Sbjct: 171 NRLGDAFLSLENGRVDAILMESTIANAYLKEYKDMKMLHVKEINEAVPGYSVAVAKGNQD 230 Query: 237 WYNIVSWTHYAMVTAEELG 255 N ++ + + E G Sbjct: 231 LVNQINSVIKELKDSGEYG 249 >gi|158340821|ref|YP_001521989.1| ABC transporter, periplasmic substrate-binding protein [Acaryochloris marina MBIC11017] gi|158311062|gb|ABW32675.1| ABC transporter, periplasmic substrate-binding protein [Acaryochloris marina MBIC11017] Length = 319 Score = 161 bits (409), Expect = 1e-37, Method: Composition-based stats. Identities = 42/274 (15%), Positives = 99/274 (36%), Gaps = 26/274 (9%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPSKI 78 + ++L I++ + G N + FA G ++G+ ++ + + + + + Sbjct: 43 SAETVLEKIERTSTVTAGTNKNTLPFAFQDEQGQFQGYSIEMLKQIQAQLSKKLGKEINL 102 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + + L ER L + ++DI+ + +T R+ + + G ++ + K Sbjct: 103 ELVALTPNERIPKLVAGEVDIVCDASSYTWERDKDIDFSVS--YGLTGTRLLIKQGKKAW 160 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 L I AGTT E+ + + P + A DA+ D Sbjct: 161 EPEMLVNQKIAAVAGTTNEIAIRRAQPKAQIIVLP----DHTQGYKALEQGTVDAFAADG 216 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 L T+ P + ++ S+ +A + + ++++ N V+++ + Sbjct: 217 ILLEGWLQTSQNPEDFTVVG-YFSREGIACMVPENNSKFVNQVNYSLVRFMEG------- 268 Query: 259 KNINQVSKDTTNPDVQ---RFLGIDKSSNIGEAL 289 P V+ R+ G + + + L Sbjct: 269 ------YLKGKEPYVKTFDRWFGPEAKVPLTQDL 296 >gi|309808664|ref|ZP_07702556.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners LactinV 01V1-a] gi|308168138|gb|EFO70264.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners LactinV 01V1-a] Length = 273 Score = 161 bits (409), Expect = 1e-37, Method: Composition-based stats. Identities = 37/257 (14%), Positives = 92/257 (35%), Gaps = 13/257 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSK 77 + ++ +K+ + G F + + GF++D +A++ + + Sbjct: 24 GHAKKVNVYQKVKQSRTMIWGTRADTRLFGYMDIKSSKIIGFEIDMAKAVTKQMLGKDAV 83 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 +++ K R L+++ I+ + T R+ + A G ++ I Sbjct: 84 AKFVQTTPKTRIPLLKNRNINAIWATMTITPERKKQVDFAR--PYIGAGASLLVPNNSKI 141 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 V QL+ + GTT + + ++ + +A +A + A T D Sbjct: 142 KDVHQLNNKKVLAVKGTTAVADIKKVAPKA----KVLEYDDYGQAFSALKAGQGVALTTD 197 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 L + ++ P H+I + P A+ +G E + ++ A ++ G Sbjct: 198 NCLLAGIA--SENPGFHLI-GKNYTNQPYGIAVDKGQAELRDHINKALLA---LKKNGTY 251 Query: 258 QKNINQVSKDTTNPDVQ 274 + + + +++ Sbjct: 252 HRLLVKWFDGIPGFNIK 268 >gi|217032569|ref|ZP_03438059.1| hypothetical protein HPB128_172g32 [Helicobacter pylori B128] gi|216945774|gb|EEC24398.1| hypothetical protein HPB128_172g32 [Helicobacter pylori B128] Length = 190 Score = 161 bits (409), Expect = 1e-37, Method: Composition-based stats. Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 7/183 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M+ F V I + S L IK+RG LK G+ + F V + G ++G+D Sbjct: 9 MWGLFLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGYD 68 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V + ++ + D +KI+++P+ A R L++ ++DI+ N T RE + A Sbjct: 69 VVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKVVDFAK-- 126 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y ++ K I ++ +L + V GTT + YF + + FE+ Sbjct: 127 -PYMKVALGVISKDGVIKNIEELKDKELIVNKGTTADF----YFTKNYPNIKLLKFEQNT 181 Query: 181 EID 183 E Sbjct: 182 ETF 184 >gi|171743317|ref|ZP_02919124.1| hypothetical protein BIFDEN_02448 [Bifidobacterium dentium ATCC 27678] gi|171278931|gb|EDT46592.1| hypothetical protein BIFDEN_02448 [Bifidobacterium dentium ATCC 27678] Length = 270 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 46/244 (18%), Positives = 89/244 (36%), Gaps = 11/244 (4%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 G ++ GI G K NG + GFDVD + ++ + +I + +K+R Sbjct: 26 ADGKIRIGIKFDQPGLGF-KKNGTYVGFDVDVAKYVAKKLGYSEDQIVWKEAPSKQREAM 84 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICV 150 LQ+ +D + T R+ + A + GQ ++ K I L+G +C Sbjct: 85 LQNGDVDFIVATYSITDERKKVVSFA--GPYFVAGQDLLVRKDETSIKGPEDLNGKRLCS 142 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 G+T+ +T+ + F + + E A + DA T D L L Sbjct: 143 VTGSTSAVTVKEKFASE---VQLMEQPGYAECATALFSGIVDAVTTDDIILAGLASAAR- 198 Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 ++ ++ I +GDT+ ++ M+ + + + Sbjct: 199 -GRLRVVGKPFTQEYYGVGIKKGDTQLATKINNAIADMIQDGSWK--RAISDNTKGTSYT 255 Query: 271 PDVQ 274 P+ + Sbjct: 256 PNAK 259 >gi|325956290|ref|YP_004286900.1| glutamine-binding protein [Lactobacillus acidophilus 30SC] gi|325332855|gb|ADZ06763.1| glutamine-binding protein precursor [Lactobacillus acidophilus 30SC] Length = 272 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 42/265 (15%), Positives = 94/265 (35%), Gaps = 13/265 (4%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIF 72 L ++ ++ + G+ F +G +GF++D +AL+ + Sbjct: 19 TLSACGNKGKQNVYQKVETSKHIVWGVRADTRLFGLTNVKSGKIEGFEMDLAKALTKQML 78 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 ++ A R L++ +D + T R + + G ++ Sbjct: 79 GKKGTASFVTTTANTRIPLLKNGNVDAVLATMTITPERAKQVTFTKA--YFPAGSSLLVP 136 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 I++V L+ ++ GTT D K + ++ + +A +A++ Sbjct: 137 NNSKITNVKDLNNKTVLAVKGTTAV----DDVHKSAPKARVLQYDDYGQAMSALKANQGV 192 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 A T D L + N + ++ + S +P A+ +G TE + ++ A+ E Sbjct: 193 ALTTDNGLLAGIAQENKG---YKLVGGVYSDAPYGIAVNKGQTEMADHIN---KALKELE 246 Query: 253 ELGITQKNINQVSKDTTNPDVQRFL 277 G + I + ++ L Sbjct: 247 ANGTYNRLIKKWFAGIPGFSLKGVL 271 >gi|241895820|ref|ZP_04783116.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Weissella paramesenteroides ATCC 33313] gi|241870863|gb|EER74614.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Weissella paramesenteroides ATCC 33313] Length = 282 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 45/275 (16%), Positives = 93/275 (33%), Gaps = 21/275 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASIL-----GDIKKRGFLKCGINTGLVGFAEVK-ANG 54 M + + L +A + I K + G+ + G Sbjct: 9 MKSILAAAAVTLFAGATEGTVIHADTVKNQTYDRIMKTDRMNWGVKGDTKLMGLMNIKTG 68 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 +GFDVD + ++ I + +K++Y + + R L + ID + T R+ + Sbjct: 69 KLEGFDVDMAKEITKRI-NPKAKVEYTQITSGTRVPMLLNGNIDAIIATMSITPDRQKVV 127 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYH 172 + + GQ ++ K +V QL+ A + G+T+ + D+ Sbjct: 128 DFSQS--YFNAGQSILVKKSSKYHNVKQLNTPKARVLAVQGSTSIDEIKDFAPKA----K 181 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + + A +A + DA T D LY + + + +K P A+ + Sbjct: 182 VVGLQDYATALTALKAGQGDALTTDNGILYGMAAGSKT---LEVRGGTFTKEPYGVAMQK 238 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 + + V+ + + G K + Sbjct: 239 QNPKLVKAVNKAIDDIKS---DGTYAKMAKKWFGS 270 >gi|310778238|ref|YP_003966571.1| amino acid ABC transporter substrate-binding protein, PAAT family [Ilyobacter polytropus DSM 2926] gi|309747561|gb|ADO82223.1| amino acid ABC transporter substrate-binding protein, PAAT family [Ilyobacter polytropus DSM 2926] Length = 262 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 42/255 (16%), Positives = 82/255 (32%), Gaps = 11/255 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + + +L ST IK++G G++ +G+ GFD Sbjct: 1 MKKIVLIFLATIALLGCGKKST--DSYDKIKEQGKFIVGLDDTFAPMGFRDESGEIVGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + ++S + + ++ P L+S ID++ T R+ + + Sbjct: 59 IDLAKEVASRMGVEA---EFSPREWSSIVFELKSGNIDMVWNGMTITPERQEQIAFSE-- 113 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + + Q + I + L G I VQ G+++ + + Sbjct: 114 PYFANDQIIMTLADSPIQTAEDLKGKIIGVQLGSSSYTLVMKN-PISESASEIKKYATNA 172 Query: 181 EIDAAYRAHRCDAYTGDISA---LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E A R DA D+ A K + L + K + + D + Sbjct: 173 EALMDLEAKRIDAVVMDVIVGEYYAAKKEAREGKDIFKSLDKALGKEDFGVGLRKEDKKL 232 Query: 238 YNIVSWTHYAMVTAE 252 + M Sbjct: 233 KKEIDKILDEMKKDG 247 >gi|290891212|ref|ZP_06554274.1| hypothetical protein AWRIB429_1664 [Oenococcus oeni AWRIB429] gi|290479176|gb|EFD87838.1| hypothetical protein AWRIB429_1664 [Oenococcus oeni AWRIB429] Length = 287 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 53/277 (19%), Positives = 101/277 (36%), Gaps = 27/277 (9%) Query: 5 FFVSILCLIILFFTSFSTNA---------SILGDIKKRGFLKCGINTGLVGFAEVKAN-G 54 SI+ +++ F S +A +K+ G ++ G+ F + G Sbjct: 11 IISSIILTLLIIFGVVSASALAENNSKHVDTWERVKRLGKIRWGVKADTKLFGLMDTKTG 70 Query: 55 DWKGFDVDFCRALSSAIF---DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 +GFDVD +AL+ + P + + + + R L++ ID T RE Sbjct: 71 QPEGFDVDIAKALTVQLSKQSGVPMQADFTIVTSNTRIQLLKNANIDGFIATATITPERE 130 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG--ASICVQAGTTTELTLADYFKAHNM 169 + + + GQ ++ K GI S+ L+ ++I G+ + + + + Sbjct: 131 KVIDFSNS--YFKAGQSILVKKGSGIKSIKDLNNSKSTIIGVVGSNSVINVKKFAPKA-- 186 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + + AA +A + A T D LY L N + ++ + P A Sbjct: 187 --KVLALGDYGQAMAALKAGQGQALTTDNGILYGLATENPG---YTVVGGTFTSEPYGVA 241 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 E +V T+ A+ G K I + + Sbjct: 242 FDNNQPE---MVKQTNKALKAIIANGTYNKLIKKWFR 275 >gi|284048142|ref|YP_003398481.1| extracellular solute-binding protein family 3 [Acidaminococcus fermentans DSM 20731] gi|283952363|gb|ADB47166.1| extracellular solute-binding protein family 3 [Acidaminococcus fermentans DSM 20731] Length = 292 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 56/265 (21%), Positives = 93/265 (35%), Gaps = 42/265 (15%) Query: 1 MYKDFFVSILCLIILFFTSF-------------STNASILGDIKKRGFLKCGINTGLVGF 47 + K F V + L+ + + S A + IKKRG L+ G+ GF Sbjct: 7 LRKIFAVGVTVLMAVSLFAGCGDEKKSADSGKSSNVAEDIAAIKKRGVLRVGVKNSTKGF 66 Query: 48 AEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 A G + G +VD AL+ + D ++Y P+ A R L S ID+++ Sbjct: 67 GYQDPATGKFTGLEVDLGEALAKKLGVD---VEYTPVTAATRTALLDSGDIDMVAATFTI 123 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD---- 162 T R+ S Y D G ++ K I+S++ L G + V +G+T+ L + Sbjct: 124 TPERKKSWDF--TTPYYTDHVGVLVEKASNINSLADLKGKVVGVSSGSTSAKALVEAMIK 181 Query: 163 ------------YFKAHNMK--YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 F A + I A + A+ D S L Sbjct: 182 AKVIDGEGFDPKNFDAATWTKGVSFKQYADYPAISTALTSGEVSAFCVDKSILAIYHT-- 239 Query: 209 DRPSEHVILPDIISKSPLAPAIIQG 233 + + + + A +G Sbjct: 240 ---DDRTFIKEEFAPQDYGLATKKG 261 >gi|227547864|ref|ZP_03977913.1| amino acid ABC superfamily ATP binding cassette transporter binding protein [Corynebacterium lipophiloflavum DSM 44291] gi|227080049|gb|EEI18012.1| amino acid ABC superfamily ATP binding cassette transporter binding protein [Corynebacterium lipophiloflavum DSM 44291] Length = 332 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 50/256 (19%), Positives = 103/256 (40%), Gaps = 11/256 (4%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQ 79 +T A + D+ +RG + G++ + GD +GF++D R +S IF DP ++ Sbjct: 75 ATPAERIPDVVERGRIVVGVDQSQYLLSYRDVTAGDLRGFEIDLAREVSRDIFGDPDRVD 134 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 + + +++R +LQ+ ++DI+ R T R S+ ++ + +GISS Sbjct: 135 FRFVGSQQRAQSLQNGEVDIVIRTMSVTPTRVASVDF--STPYLTSYVRLLVPRDRGISS 192 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L G ++CV G+ L + + + + A + DA D + Sbjct: 193 EDDLPGTTVCVVDGS----NLVQLAREIAPQSTILRTRTWADCLMATQQFHADAILADGA 248 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQ 258 L + + ILP + A +GD V+ T + + + Sbjct: 249 ILAGMVSQDP---YTTILPRRYGRQQYAVGTHKGDAGMTMQVNSTMERLRNDGTWNAMYE 305 Query: 259 KNINQVSKDTTNPDVQ 274 + ++ + P+++ Sbjct: 306 RWLSGSLASPSMPELR 321 >gi|170078777|ref|YP_001735415.1| glutamine-binding protein [Synechococcus sp. PCC 7002] gi|169886446|gb|ACB00160.1| glutamine-binding protein [Synechococcus sp. PCC 7002] Length = 260 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 47/245 (19%), Positives = 95/245 (38%), Gaps = 12/245 (4%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 + F ++ T A+ L I+ RG L+ + + G+ +G +++ L+ Sbjct: 12 AIAASFFFGSTSLTQATPLETIQARGILRVAVKENVRPLGFRDEAGNLQGLEIEIAHQLA 71 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 + + D ++ +PL +ER A+ + ++D++ R+ + P Y DG G Sbjct: 72 AELLGDRQAVELIPLTNQERLDAVLTGEVDLVIAQLGLNASRQRLVNF--SPYYYLDGIG 129 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 F + + + I S++Q+S I V G+ + YF + +E Sbjct: 130 F-VTRDREIQSLNQISDQRIVVLEGSEAIAAVRAYFP----GVTLVGVNSYQEALNYLEN 184 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ--GDTEWYNIVSWTHY 246 + + GD S L E+ +LP ++ +PLA A + + T Sbjct: 185 NETAFFAGDHSVLTGWVQEYP---EYQLLPAWLTGNPLAIAFPKGRQHQSLSQALQKTVT 241 Query: 247 AMVTA 251 + Sbjct: 242 DWQNS 246 >gi|170735478|ref|YP_001774592.1| extracellular solute-binding protein [Burkholderia cenocepacia MC0-3] gi|169821516|gb|ACA96097.1| extracellular solute-binding protein family 3 [Burkholderia cenocepacia MC0-3] Length = 268 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 45/259 (17%), Positives = 94/259 (36%), Gaps = 12/259 (4%) Query: 2 YKDFFVSILCL-IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + ++L +I F + +A L I K G L+ + F V + +G+D Sbjct: 10 RRTWLAALLAAPVIALFAAAPAHADALDTIAKNGTLRVAVPEDYPPFGSVGTDMQPQGYD 69 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D L+ ++ K++ +P+N+ R L + ++D++ + T RE + + Sbjct: 70 IDMAGLLAKSLG---VKLKLVPVNSANRIPYLTTNKVDMVISSLGKTPEREKVIDFSSAY 126 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 YF QG +S+ + L+G ++ G E+ L+ +K FE Sbjct: 127 APYF--QGVFGPSDVKVSTPADLTGKTVGATRGALEEIALSQLAPNATIK----RFEDNN 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A+ + + A+ P + +I SP + + + Sbjct: 181 ATIQAFLSGQVQLIAAGNIVAAAILA--KNPPRRPEVKFVIKNSPCFVGVNKNEPRLLAK 238 Query: 241 VSWTHYAMVTAEELGITQK 259 + LG + Sbjct: 239 IDDAIAHAKQDGSLGEMSR 257 >gi|329296932|ref|ZP_08254268.1| family 3 extracellular solute-binding protein [Plautia stali symbiont] Length = 261 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 51/263 (19%), Positives = 102/263 (38%), Gaps = 25/263 (9%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 A L DI+KRG ++ + F V N +G+D+D + L+ + K+Q +P+ Sbjct: 23 ADQLQDIQKRGVIRVAVPQDFPPFGSVGTNLQPQGYDIDMAKYLAKQM---KLKLQLVPV 79 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 + R LQ+ ++D++ + RE + + +F G K + + + L Sbjct: 80 TSANRVPYLQTDKVDLVISSMGKNAEREKVIDFSRAYAPFF--LGVFGPKGETLKDAAAL 137 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 SG SI V G ++ L+D +E +AY + + + A Sbjct: 138 SGKSIGVTRGAVEDMVLSDVAPK---DAQVKRYEDNTTTLSAYLSGQVQYVATGNLVVAA 194 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 + N + + ++ SP + + + V+ E GI +N+ Sbjct: 195 IARQNAEKA--PVPQFMLKDSPCVIGLKKNEPALKEKVNALI-------EQGIKDCTLNK 245 Query: 264 VSKDTTNPDVQRFLGIDKSSNIG 286 +S++ +L +N+G Sbjct: 246 LSEE--------WLKAPLPANLG 260 >gi|302551504|ref|ZP_07303846.1| sugar-binding protein [Streptomyces viridochromogenes DSM 40736] gi|302469122|gb|EFL32215.1| sugar-binding protein [Streptomyces viridochromogenes DSM 40736] Length = 356 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 47/271 (17%), Positives = 91/271 (33%), Gaps = 18/271 (6%) Query: 17 FTSFSTNASILGDIKKR----GFLKCGINTGLVGFAEVKANG----DWKGFDVDFCRALS 68 + S + + IK R L G++ + N + +GFD+D ++ Sbjct: 80 LSPSSADGDTIKAIKNREGEKRKLIVGVDQNSYRWGYRDPNSGRTAELEGFDIDLVHRIA 139 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 I DP +Q+ + +R A+Q ++D++ R + +AF + GQ Sbjct: 140 EDILGDPDAVQFKAIPTDQRIPAIQDGRVDMVVRTMTINC--DRIKDVAFSAPYFKTGQQ 197 Query: 129 FIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE---EIDA 184 + K I L+G IC AG+T TL + K + + V + Sbjct: 198 VLAPKSSPIKGYDDTLAGRRICTAAGSTAYSTLEEDQKDGTLPATTDISGTVPNQLDCLV 257 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + DA D + + + + D + A+ + + V+ Sbjct: 258 RLQLGEADAVVTDGALAASQAAQDPT---VQLKGDAFTAEYYGVAMKKDADDLVRRVNQI 314 Query: 245 HYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 G Q + + T D ++ Sbjct: 315 LVDYREDTANG-WQASYGKWLSATLGKDAKK 344 >gi|325913427|ref|ZP_08175793.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners UPII 60-B] gi|325477196|gb|EGC80342.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners UPII 60-B] Length = 273 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 37/257 (14%), Positives = 92/257 (35%), Gaps = 13/257 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSK 77 + ++ +K+ + G F + + GF++D +A++ + + Sbjct: 24 GQAKKVNVYQKVKQSRTMIWGTRADTRLFGYMDIKSSKIIGFEIDMAKAVTKQMLGKDAV 83 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 +++ K R L+++ I+ + T R+ + A G ++ I Sbjct: 84 AKFVQTTPKTRIPLLKNRNINAIWATMTITPERKKQVDFAR--PYIGAGASLLVPNNSKI 141 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 V QL+ + GTT + + ++ + +A +A + A T D Sbjct: 142 KDVHQLNNKKVLAVKGTTAVADIKKVAPKA----KVLEYDDYGQAFSALKAGQGVAMTTD 197 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 L + ++ P H+I + P A+ +G E + ++ A ++ G Sbjct: 198 NCLLAGIA--SENPGFHLI-GKNYTNQPYGIAVDKGQAELRDHINKALLA---LKKNGTY 251 Query: 258 QKNINQVSKDTTNPDVQ 274 + + + +++ Sbjct: 252 HRLLVKWFDGIPGFNIK 268 >gi|283455710|ref|YP_003360274.1| glutamate-binding protein gluB [Bifidobacterium dentium Bd1] gi|283102344|gb|ADB09450.1| Glutamate-binding protein GluB [Bifidobacterium dentium Bd1] Length = 256 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 46/244 (18%), Positives = 89/244 (36%), Gaps = 11/244 (4%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 G ++ GI G K NG + GFDVD + ++ + +I + +K+R Sbjct: 12 ADGKIRIGIKFDQPGLGF-KKNGTYVGFDVDVAKYVAKKLGYSEDQIVWKEAPSKQREAM 70 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICV 150 LQ+ +D + T R+ + A + GQ ++ K I L+G +C Sbjct: 71 LQNGDVDFIVATYSITDERKKVVSFA--GPYFVAGQDLLVRKDETSIKGPEDLNGKRLCS 128 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 G+T+ +T+ + F + + E A + DA T D L L Sbjct: 129 VTGSTSAVTVKEKFASE---VQLMEQPGYAECATALFSGIVDAVTTDDIILAGLASAAR- 184 Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 ++ ++ I +GDT+ ++ M+ + + + Sbjct: 185 -GRLRVVGKPFTQEYYGVGIKKGDTQLATKINNAIADMIQDGSWK--RAISDNTKGTSYT 241 Query: 271 PDVQ 274 P+ + Sbjct: 242 PNAK 245 >gi|259501519|ref|ZP_05744421.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus iners DSM 13335] gi|315653362|ref|ZP_07906284.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus iners ATCC 55195] gi|259167037|gb|EEW51532.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus iners DSM 13335] gi|315489287|gb|EFU78927.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus iners ATCC 55195] Length = 277 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 37/257 (14%), Positives = 92/257 (35%), Gaps = 13/257 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSK 77 + ++ +K+ + G F + + GF++D +A++ + + Sbjct: 28 GQAKKVNVYQKVKQSRTMIWGTRADTRLFGYMDIKSSKIIGFEIDMAKAVTKQMLGKDAV 87 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 +++ K R L+++ I+ + T R+ + A G ++ I Sbjct: 88 AKFVQTTPKTRIPLLKNRNINAIWATMTITPERKKQVDFAR--PYIGAGASLLVPNNSKI 145 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 V QL+ + GTT + + ++ + +A +A + A T D Sbjct: 146 KDVHQLNNKKVLAVKGTTAVADIKKVAPKA----KVLEYDDYGQAFSALKAGQGVALTTD 201 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 L + ++ P H+I + P A+ +G E + ++ A ++ G Sbjct: 202 NCLLAGIA--SENPGFHLI-GKNYTNQPYGIAVDKGQAELRDHINKALLA---LKKNGTY 255 Query: 258 QKNINQVSKDTTNPDVQ 274 + + + +++ Sbjct: 256 HRLLVKWFDGIPGFNIK 272 >gi|197295420|ref|YP_002153961.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315] gi|195944899|emb|CAR57508.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315] Length = 268 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 94/259 (36%), Gaps = 12/259 (4%) Query: 2 YKDFFVSILCL-IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + ++L +I F + +A L I K G L+ + F V + +G+D Sbjct: 10 RRTWLAALLAAPVIALFAAAPAHADALDTIAKNGTLRVAVPEDYPPFGSVGTDMQPQGYD 69 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D L+ A+ K++ +P+N+ R L + ++D++ + T RE + + Sbjct: 70 IDMAGLLAKALG---VKLKLVPVNSANRIPYLTTNKVDMVISSLGKTPEREKVIDFSSAY 126 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 YF QG +S+ + L+G ++ G E+ L+ +K FE Sbjct: 127 APYF--QGVFGPSDVKVSAPADLTGKTVGATRGALEEIALSQLAPNATIK----RFEDNN 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A+ + + A+ P + +I SP + + + Sbjct: 181 ATIQAFLSGQVQLIAAGNIVAAAILA--KNPPRRPEVKFVIKNSPCFVGVNKNEPRLLAK 238 Query: 241 VSWTHYAMVTAEELGITQK 259 + LG + Sbjct: 239 IDDAIAHAKQDGSLGEMSR 257 >gi|170016503|ref|YP_001727422.1| amino acid ABC transporter periplasmic protein [Leuconostoc citreum KM20] gi|169803360|gb|ACA81978.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Leuconostoc citreum KM20] Length = 288 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 49/273 (17%), Positives = 107/273 (39%), Gaps = 22/273 (8%) Query: 5 FFVSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 +++ L +++ T+ + + L ++K G + G+ F + G +GF Sbjct: 16 VLAAVIVLGLMWATATAKQNEAHQDTLARVEKLGRIVWGVKADTKLFGLMNTKTGKPEGF 75 Query: 60 DVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 D+D +AL+ I P +++P++A + +++ ID T RE + Sbjct: 76 DIDIAKALTVQISKQTGVPMSAEFVPVSASSKMQLIKNTNIDGSVSTMTITPEREKIIDF 135 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPI 174 + + GQ ++ K GI+SV ++ + +I V GTT +A + + Sbjct: 136 TNQ--YFDAGQSILVKKDSGINSVKDMNDSKYTIIVVVGTTAATEIAKFAPKA----KVL 189 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + A ++ + A + D + LY N ++ I + P A Sbjct: 190 AVQDYATGMQALKSGQGQAMSTDNAILYGFATENP---DYHIAGGTFTHGPYGIAFDNNQ 246 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 ++ + A+ +E G+ + + + D Sbjct: 247 KP---MIREANKALAKIKENGVYNQLVKKWFSD 276 >gi|302191508|ref|ZP_07267762.1| amino acid ABC transporter solute-binding component [Lactobacillus iners AB-1] gi|309804283|ref|ZP_07698360.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners LactinV 11V1-d] gi|309806868|ref|ZP_07700855.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners LactinV 03V1-b] gi|309809497|ref|ZP_07703355.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners SPIN 2503V10-D] gi|312872448|ref|ZP_07732517.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners LEAF 2062A-h1] gi|308163686|gb|EFO65956.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners LactinV 11V1-d] gi|308166734|gb|EFO68926.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners LactinV 03V1-b] gi|308170169|gb|EFO72204.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners SPIN 2503V10-D] gi|311092030|gb|EFQ50405.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners LEAF 2062A-h1] Length = 273 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 37/257 (14%), Positives = 92/257 (35%), Gaps = 13/257 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSK 77 + ++ +K+ + G F + + GF++D +A++ + + Sbjct: 24 GQAKKVNVYQKVKQSRTMIWGTRADTRLFGYMDIKSSKIIGFEIDMAKAVTKQMLGKDAV 83 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 +++ K R L+++ I+ + T R+ + A G ++ I Sbjct: 84 AKFVQTTPKTRIPLLKNRNINAIWATMTITPERKKQVDFAR--PYIGAGASLLVPNNSKI 141 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 V QL+ + GTT + + ++ + +A +A + A T D Sbjct: 142 KDVHQLNNKKVLAVKGTTAVADIKKVAPKA----KVLEYDDYGQAFSALKAGQGVALTTD 197 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 L + ++ P H+I + P A+ +G E + ++ A ++ G Sbjct: 198 NCLLAGIA--SENPGFHLI-GKNYTNQPYGIAVDKGQAELRDHINKALLA---LKKNGTY 251 Query: 258 QKNINQVSKDTTNPDVQ 274 + + + +++ Sbjct: 252 HRLLVKWFDGIPGFNIK 268 >gi|330879084|gb|EGH13233.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 258 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 39/210 (18%), Positives = 73/210 (34%), Gaps = 9/210 (4%) Query: 6 FVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVD 62 + + L T L IK+ G + G + F+ + A+G G+ D Sbjct: 51 LLGVAITAALISTPVFAAELTGTLKKIKESGTITLGHRDASIPFSYIADASGVPMGYSHD 110 Query: 63 FCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 + AI D K++Y + ++ R +Q+ +D+ +T + R+ + + Sbjct: 111 IQLKIVEAIKKDLDMPDLKVKYNLVTSQTRIPLVQNGTVDVECGSTTNNVERQQQVDFSI 170 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + G + K L G ++ AGTT+E L M + I + Sbjct: 171 GI--FEVGTRLLSKKDSSYKDFDDLKGKNVVTTAGTTSERILKAMNADKQMGMNVISAKD 228 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTN 208 E + R A+ D + L Sbjct: 229 HGESFQMLESGRAVAFMMDDALLAGEMAKA 258 >gi|330718494|ref|ZP_08313094.1| amino acid ABC transporter periplasmic protein [Leuconostoc fallax KCTC 3537] Length = 265 Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 51/256 (19%), Positives = 98/256 (38%), Gaps = 18/256 (7%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDD-- 74 S + + IK++ + G+ F + G+++GFDVD RA++ I D Sbjct: 11 ASEAKHVDTFDRIKEQHRIVWGVKADTRLFGLMNTKTGEYEGFDVDIARAVTKQIAKDQN 70 Query: 75 -PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 K + + +++ + L++ ID + T RE + + GQ ++ + Sbjct: 71 IKLKAELVQVSSSSKIQLLKNANIDATASVMTITKERENQVDFTQ--PYFPAGQSLLVKE 128 Query: 134 KKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191 I SV L+ G ++ GTT T+ ++ K + + A +A + Sbjct: 129 NSDIRSVKDLNQPGRTVIGAVGTTAIPTMKEFAP----KVRVLSLADYAQSMTALKAGQG 184 Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 DA T D + LY L N + I+ + P A ++ A+ Sbjct: 185 DALTTDNAILYGLAQQNPG---YKIVGGNFTNQPYGLATDNDQPRMIAAMN---KALDEL 238 Query: 252 EELGITQKNINQVSKD 267 E+ G + I + + Sbjct: 239 EKNGTYNRLIKKWFSN 254 >gi|300311590|ref|YP_003775682.1| amino acid ABC transporter/signal transduction system periplasmic protein/domain-containing protein [Herbaspirillum seropedicae SmR1] gi|300074375|gb|ADJ63774.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain protein [Herbaspirillum seropedicae SmR1] Length = 267 Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 55/262 (20%), Positives = 99/262 (37%), Gaps = 13/262 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K +L L + A L DI+K G ++ G+ F V + +G D+ Sbjct: 6 RKTMLAVVLGLAAM--QGGLARADALADIQKNGVVRIGVPQDFAPFGSVNTDLQLQGLDI 63 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D R ++ + K+Q +P+ + R LQ+ + D++ RE + + Sbjct: 64 DVARLIAQKMG---VKLQLVPVASANRIAYLQTHKADLVISTLGRNAEREKVIDFSQPYA 120 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y + + +S + L+ ++ V GT +L L D +E Sbjct: 121 PYNNSVFGVA--SVKVSGPADLADKTVGVARGTFQDLQLTDTAPK---SATIKRYEDNNA 175 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + +AY + + YAL P+ +L II +S + +G+ V Sbjct: 176 MISAYVSGQVQLVGTGDFVAYALA--EKAPNNKPVLKYIIQESACNVGLNKGEPALLAKV 233 Query: 242 SWTHYAMVTAEEL-GITQKNIN 262 + A + EL GI QK +N Sbjct: 234 NEALTAAKKSGELNGIVQKWLN 255 >gi|227834107|ref|YP_002835814.1| putative extracellular solute-binding protein [Corynebacterium aurimucosum ATCC 700975] gi|262183407|ref|ZP_06042828.1| putative extracellular solute-binding protein [Corynebacterium aurimucosum ATCC 700975] gi|227455123|gb|ACP33876.1| putative extracellular solute-binding protein [Corynebacterium aurimucosum ATCC 700975] Length = 363 Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 46/242 (19%), Positives = 96/242 (39%), Gaps = 12/242 (4%) Query: 29 DIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 DI RG L G++ + A+G+ +GF+VD R ++ IF DP+K+ + + A E Sbjct: 92 DILARGRLIVGVDRSNNLLSYRDTASGEVRGFEVDIAREIARDIFGDPNKVDFRFVEASE 151 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 R AL + +DI+ R + R+ + + ++ K G+ S++ +G + Sbjct: 152 RARALNDRTVDIVIRTMTISPSRQREVSFSI--PYMQTDARLLVLKNSGVESIADTAGMT 209 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 +C G+T + D + H + + A + + D D + L + Sbjct: 210 LCATKGST----MVDAIRTHAPASDILETRAWGDCLMALQLGQADGIVVDDALLSGMLAQ 265 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYN--IVSWTHYAMVTAEELGITQKNINQVS 265 + I+ + A+ + D + + ++ + + + G Q+ Sbjct: 266 DR---YTEIVGGPLESQSYGVAVRKPDGSYDSRPLIRQVNSTLERIRKDGTWQRLFTTWL 322 Query: 266 KD 267 D Sbjct: 323 GD 324 >gi|121607779|ref|YP_995586.1| extracellular solute-binding protein [Verminephrobacter eiseniae EF01-2] gi|121552419|gb|ABM56568.1| extracellular solute-binding protein, family 3 [Verminephrobacter eiseniae EF01-2] Length = 358 Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 41/206 (19%), Positives = 79/206 (38%), Gaps = 4/206 (1%) Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +G+ V+ C + I +K++Y+ + A+ +++ +DI T R+ + Sbjct: 120 RGYHVELCERVLRQI-APAAKLEYMAVTAQNTLPLVRNGTLDIGCGPTTNNQARQQQVAF 178 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 A TY + GI+SV QL G ++ GTT L + ++ Sbjct: 179 AV--TTYVSEVRMAVRADSGIASVDQLGGRTVAASTGTTAVQMLRKLERTLGAPITVLLG 236 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + E + R DA+ D + L + + P I+ + P+A + + D Sbjct: 237 KDHAESFLLLESGRVDAFVLDDNLLAGMIASAKNPGHFRIVGQALGSEPIALLMRKDDPA 296 Query: 237 WYNIVSWTHYAMVTAEEL-GITQKNI 261 + V ++ + EL I K Sbjct: 297 FKAAVDGVLIRLMQSGELEKIYAKWF 322 >gi|291279627|ref|YP_003496462.1| polar amino acid ABC transporter substrate-binding protein [Deferribacter desulfuricans SSM1] gi|290754329|dbj|BAI80706.1| polar amino acid ABC transporter, substrate-binding protein [Deferribacter desulfuricans SSM1] Length = 266 Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 59/258 (22%), Positives = 110/258 (42%), Gaps = 19/258 (7%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K ++ + TSF+T S L + K+G LK G++T V +A NG+ G Sbjct: 1 MKFLKKLLFLMIIFAFVAQTSFATE-STLDKVLKKGVLKVGMST-FVPWAMYDKNGNLIG 58 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 F++D + L+ + KI+++P AL + + DI+ T R +L + F Sbjct: 59 FEIDVAKRLAKDMG---VKIEFVPTKWSGIIPALLTGKFDIIIGGMSITPQR--ALKVNF 113 Query: 119 RPITYFDGQGFIMH--KKKGISSVSQLSGAS--ICVQAGTTTELTLADYFKAHNMKYHPI 174 + G + + K KG + +S + + I V+ GTT E+ +F +K Sbjct: 114 SIPYDYSGMSIVANKFKAKGWNKLSDFNKKNVIIAVRIGTTAEVASKRFFPNAKIK---- 169 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +F+ + R A + + A + ++ + D +K P+ A+ +GD Sbjct: 170 LFDDESQAIQELLLGRAHAVVA-SAPMPAFQAIEHPDRLYLPIKDTFTKEPIGFAVRKGD 228 Query: 235 TEWYNIVS-WTHYAMVTA 251 ++ N ++ W Y Sbjct: 229 YDFLNFLNSWIRYVKAEG 246 >gi|134291672|ref|YP_001115441.1| extracellular solute-binding protein [Burkholderia vietnamiensis G4] gi|134134861|gb|ABO59186.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia vietnamiensis G4] Length = 268 Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 90/259 (34%), Gaps = 12/259 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + ++L + + + + L I K G L+ + F V + +G+D Sbjct: 10 RRTWLAALLAASVTALFAAAPAQADALDTIAKSGTLRVAVPEDYPPFGSVGTDMQPQGYD 69 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D L+ A+ K+ +P+N+ R L + ++D++ + T RE + + Sbjct: 70 IDMAGLLARALG---VKLALVPVNSANRIPYLTTNKVDMVISSLGKTPEREKVIDFSSAY 126 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 YF QG +S+ + L+G ++ G E+ L +K FE Sbjct: 127 APYF--QGVFGPADVKVSTPADLTGKTVGATRGALEEIALTQLAPNATIK----RFEDNN 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A+ + + A+ P + +I SP + + + Sbjct: 181 ATIQAFLSGQVQLIAAGNIVAAAILA--KNPPRRPEVKFVIKNSPCFVGVNKNEPRLLAK 238 Query: 241 VSWTHYAMVTAEELGITQK 259 + LG K Sbjct: 239 IDDAIAHAKQDGTLGAMSK 257 >gi|116491605|ref|YP_811149.1| amino acid ABC transporter periplasmic protein [Oenococcus oeni PSU-1] gi|116092330|gb|ABJ57484.1| amino acid ABC transporter substrate-binding protein, PAAT family [Oenococcus oeni PSU-1] Length = 287 Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 53/277 (19%), Positives = 101/277 (36%), Gaps = 27/277 (9%) Query: 5 FFVSILCLIILFFTSFSTNA---------SILGDIKKRGFLKCGINTGLVGFAEVKAN-G 54 SI+ +++ F S +A +K+ G ++ G+ F + G Sbjct: 11 IISSIILTLLIIFGVVSASALAENNSKHVDTWERVKRLGKIRWGVKADTKLFGLMDTKTG 70 Query: 55 DWKGFDVDFCRALSSAIF---DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 +GFDVD +AL+ + P + + + + R L++ ID T RE Sbjct: 71 QPEGFDVDIAKALTVQLSKQSGVPMQADFTIVTSNTRIQLLKNANIDGFIATATITPERE 130 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG--ASICVQAGTTTELTLADYFKAHNM 169 + + + GQ ++ K GI S+ L+ ++I G+ + + + + Sbjct: 131 KVIDFSNS--YFKAGQSILVKKGSGIKSIKDLNNSKSTIIGVVGSNSVINVKKFAPKA-- 186 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + + AA +A + A T D LY L N + ++ + P A Sbjct: 187 --KVLALGDYGQAMAALKAGQGQALTTDNGILYGLATENPG---YTVVGGTFTSEPYGVA 241 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 E +V T+ A+ G K I + + Sbjct: 242 FDNNQPE---MVKQTNKALKAIIANGTYNKLIRKWFR 275 >gi|239979493|ref|ZP_04702017.1| putative ABC transporter solute-binding protein [Streptomyces albus J1074] Length = 312 Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 43/256 (16%), Positives = 85/256 (33%), Gaps = 14/256 (5%) Query: 22 TNASILGDIKKR----GFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPS 76 + L IK R L GI+ + A G +GFD+D RA++ + DP Sbjct: 58 AEGATLERIKSRTDKPRKLIVGIDQNSYRWGYRDPATGSLEGFDIDLVRAIAEELMGDPE 117 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 + + + R A+ S ++D++ R T + +AF + GQ ++ K Sbjct: 118 AVVFRAIPTNRRVQAIDSGEVDMVVRTMTITC--DRIKEVAFSTAYFETGQQLLVPKGSR 175 Query: 137 ISSVS-QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I+ L G +C AG+T L + + + + + DA Sbjct: 176 ITGHDTSLKGRKVCAAAGST---ALTELEREAHGADISTTVPNQLDCLVRLQLGEVDAVV 232 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D + + ++ + ++ A+ + + V+ Sbjct: 233 TDSALAAGQAAQDP---MVELVGEPFTEEFYGVAMHKDAKDLVARVNQVLVEYRKDGWER 289 Query: 256 ITQKNINQVSKDTTNP 271 K + + P Sbjct: 290 SYDKWLKDGMGKSPGP 305 >gi|154246016|ref|YP_001416974.1| extracellular solute-binding protein [Xanthobacter autotrophicus Py2] gi|154160101|gb|ABS67317.1| extracellular solute-binding protein family 3 [Xanthobacter autotrophicus Py2] Length = 269 Score = 160 bits (406), Expect = 3e-37, Method: Composition-based stats. Identities = 43/249 (17%), Positives = 91/249 (36%), Gaps = 15/249 (6%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 S + A L DI K G ++ + F V + G+D+D +++ + Sbjct: 25 VALSTAARADTLDDIMKAGVIRIAVPQDFPPFGSVGVDLKPLGYDIDVANLIAAKLG--- 81 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 K + +P+ + R LQ+K++D++ + RE + + +F+G Sbjct: 82 VKAELVPVTSANRIPYLQTKKVDLVISSLGKNPEREKVMDFSVAYAPFFNG--IFGPADV 139 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 + V ++G ++ V G+ +L L +E +A+ + + Sbjct: 140 KVEKVEDIAGMTVGVTRGSVEDLELTKVAP---PTADIKRYEDNNSTISAFLSGQVKVVA 196 Query: 196 GDISALYALKLTND--RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 A+ N +P V++ SP + + + + V+ A Sbjct: 197 TGNVVAAAILARNPPKKPQVKVLIK----NSPCYVGLNKDEPKLLEKVNAIITAAKADGS 252 Query: 254 L-GITQKNI 261 L I+QK + Sbjct: 253 LEKISQKWL 261 >gi|238064114|ref|ZP_04608823.1| glutamate binding protein [Micromonospora sp. ATCC 39149] gi|237885925|gb|EEP74753.1| glutamate binding protein [Micromonospora sp. ATCC 39149] Length = 281 Score = 160 bits (406), Expect = 3e-37, Method: Composition-based stats. Identities = 39/257 (15%), Positives = 88/257 (34%), Gaps = 12/257 (4%) Query: 1 MYKDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M +++ L S + ++ + + G+ + +K +G Sbjct: 1 MRVTRAAAVVVFATLSLIPGSCGRGDSGPDVIEKAAETKTITIGVIPNQPNLS-LKTDGT 59 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + GFDV+ + ++ + DP+ IQ+ +R ++ +D++ R+ + Sbjct: 60 YVGFDVEIGKIVAKGLGVDPANIQWKDTTVPDRERVIKDGTVDLVVATYTINDARKKEIR 119 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 A Y GQ ++ I L G +C AG+T A ++ K Sbjct: 120 FA--GPYYVAGQDLLVKANSTIKGPEDLEGKVVCSSAGSTP----AKRIRSQYPKTRLQQ 173 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 +++ + DA T D L + + + ++ + S+ P + + D Sbjct: 174 YDQESRCLPDLESGAIDAVTTDNVVLLGYSMRPENAGKFKLVGNTFSEEPYGIGMKKRDR 233 Query: 236 EWYNIVSWTHYAMVTAE 252 ++ A Sbjct: 234 ASCEKINEILQAAARDG 250 >gi|116686709|ref|YP_839956.1| extracellular solute-binding protein [Burkholderia cenocepacia HI2424] gi|116652424|gb|ABK13063.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia HI2424] Length = 268 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 93/259 (35%), Gaps = 12/259 (4%) Query: 2 YKDFFVSILCL-IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + ++ +I F + +A L I K G L+ + F V + +G+D Sbjct: 10 RRTWLAALFAAPVIALFAAAPAHADALDTIAKNGTLRVAVPEDYPPFGSVGTDMQPQGYD 69 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D L+ ++ K++ +P+N+ R L + ++D++ + T RE + + Sbjct: 70 IDMAGLLAKSLG---VKLKLVPVNSANRIPYLTTNKVDMVISSLGKTPEREKVIDFSSAY 126 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 YF QG +S+ + L+G ++ G E+ L+ +K FE Sbjct: 127 APYF--QGVFGPSDVKVSTPADLTGKTVGATRGALEEIALSQLAPNATIK----RFEDNN 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A+ + + A+ P + +I SP + + + Sbjct: 181 ATIQAFLSGQVQLIAAGNIVAAAILA--KNPPRRPEVKFVIKNSPCFVGVNKNEPRLLAK 238 Query: 241 VSWTHYAMVTAEELGITQK 259 + LG + Sbjct: 239 IDDAIAHAKQDGSLGEMSR 257 >gi|207092714|ref|ZP_03240501.1| glutamine ABC transporter, periplasmic glutamine-binding protein (glnH) [Helicobacter pylori HPKX_438_AG0C1] Length = 220 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 47/224 (20%), Positives = 99/224 (44%), Gaps = 10/224 (4%) Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 + + G ++G+DV + ++ + D +KI+++P+ A R L++ ++DI+ N T Sbjct: 1 MDSKGKYQGYDVVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKE 60 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 RE + A Y ++ K I ++ +L + V GTT + YF + Sbjct: 61 REKVVDFAK---PYMKVALGVISKDGVIKNIEELKDKELIVNKGTTADF----YFTKNYP 113 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + FE+ E + ++ A D + L A P + + + K +APA Sbjct: 114 NIKLLKFEQNTETFLSLLNNKATALAHDNTLLLAWAKQ--HPEFKLGITSLGDKDVIAPA 171 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELG-ITQKNINQVSKDTTNPD 272 I +G+ + ++ ++++++ L Q+ + V D P+ Sbjct: 172 IKKGNPKLLEWLNNEIDSLISSDFLKEAYQETLAPVYGDEIKPE 215 >gi|325062401|gb|ADY66091.1| polar amino acid uptake family ABC transporter, periplasmic substrate-binding protein [Agrobacterium sp. H13-3] Length = 277 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 48/237 (20%), Positives = 89/237 (37%), Gaps = 10/237 (4%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 D+K R L G+ + + G+ GF+V+ + ++ + KI+++P+ A Sbjct: 31 DDVKARDKLIVGVKNDYPPYGYLNDKGEIIGFEVELAKYVAKELLGSSDKIEFVPVVAAN 90 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 R L + +ID + T R+ + ++ G +M K+ S +L G Sbjct: 91 RIEFLTAGRIDAIFATLGVTPERDKVIDFTTAYVS-SPGPAVMMAKEATTSKWEELKGKP 149 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 +C G+ + + F + F+ E A R +RC + D L LK+ Sbjct: 150 VCGIQGSYYNKKMTEEF-----GIQLVAFKTQPEAMRALRDNRCVGFVFDQMTLD-LKVQ 203 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 + + P+A I +GD + V A+ AE G + Sbjct: 204 EADWKGYKVAVPTYEYLPMAGGIREGDKAFQEAVD---KAITKAEAEGKMIAWETEF 257 >gi|296392570|ref|YP_003657454.1| family 3 extracellular solute-binding protein [Segniliparus rotundus DSM 44985] gi|296179717|gb|ADG96623.1| extracellular solute-binding protein family 3 [Segniliparus rotundus DSM 44985] Length = 335 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 42/234 (17%), Positives = 89/234 (38%), Gaps = 12/234 (5%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 + L I +RG L G++ G F+ A G KGFDV R ++ + DP+++ Y Sbjct: 78 HGGRLDRILQRGKLVVGLDQGTYPFSYRDSATGQMKGFDVAMAREIAQGMLGDPNRVDYR 137 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 +++ R AL++ +DI+ + R + + + Q + ++++ Sbjct: 138 IISSAGRTTALENDSVDIVIKTMSINCKRMKEITFSE--PYFETDQRVMAATNANATTLA 195 Query: 142 Q---LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 L +++C G+T F + + A + DA + D Sbjct: 196 DRKILGESTVCAARGSTAVGHFHHLFPTA----KILGTTTWADCLVAIQQGSVDAISSDE 251 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 S LY + P+ + + + + + +G+ E +V+ + Sbjct: 252 SILYGFY--DQDPNLYFLSALQLGREVYGVGMHKGEAELERVVNKIIEEIKADG 303 >gi|294791037|ref|ZP_06756195.1| glutamate-binding protein [Scardovia inopinata F0304] gi|294458934|gb|EFG27287.1| glutamate-binding protein [Scardovia inopinata F0304] Length = 291 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 54/277 (19%), Positives = 105/277 (37%), Gaps = 19/277 (6%) Query: 3 KDFFVSILCLIILFFT--SFSTNASILGDIKKRG-FLKCGINTGLVGFAEVKANGDWKGF 59 + + IL +I + + S S S + G ++ GI G K NG + GF Sbjct: 18 RSVLIKILAVIAVLASVASVSACGST-----QSGHVIRIGIKFDQPGVGY-KKNGTYSGF 71 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD R ++ + +I++ +K+R LQ+ +D++ + T R+ ++ A Sbjct: 72 DVDVARYIAHKLGYKDYEIEWTEAPSKQRETMLQNGDVDMILASYSITDDRKKTVSFA-- 129 Query: 120 PITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 GQ ++ K I L+G +C G+T+ + + K + Sbjct: 130 GPYLVAGQDLLIRKSNTSIKGPDDLNGKRLCSVTGSTSATVVKQKYSN---KVQLMEQPS 186 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E A + DA T D L L + + ++ ++ I + + + Sbjct: 187 YAECATALFSGIVDAVTTDDIILAGLASNSR--GKLKLVGHPFTQEYYGVGIQK-NKKTK 243 Query: 239 NIVSWTHYAMVTAEELGITQKNI-NQVSKDTTNPDVQ 274 + A+ + G ++ I N S +PD + Sbjct: 244 AFAKKINAAIKDMIKTGAWKRAIWNNTSGTGFSPDTK 280 >gi|293603253|ref|ZP_06685684.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] gi|292818342|gb|EFF77392.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] Length = 275 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 52/287 (18%), Positives = 110/287 (38%), Gaps = 15/287 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59 M I + + + + +A + DIK RG CG F+ G+ Sbjct: 1 MKTTIASFIAAVGVAATLAPAAHADTVQDIKARGKFICGTMGTAEPFSFQDPKTRAIVGY 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 +VD C+A++ ++ P +++ + + A R L + ++D+++ N W+ R + + + Sbjct: 61 EVDMCQAVADSLGV-PLELKLIAVEA--RIPELIAGRVDVVAANLGWSPERAQQIDYSHQ 117 Query: 120 PITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + Q + + K + + + L+G I G+++E + + P+ F+ Sbjct: 118 --HFVSLQKILARESEKDLKAPADLAGKRISAVRGSSSEQG----ARKNIPNVEPVTFKD 171 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE-HVILPDIISKSPLAPAIIQGDTEW 237 A + + + G L L+ + IL + P + +GDT Sbjct: 172 PSGAFLALQQGKVSGFVGSELMLVKLQHQAASSAVPVKILQPALFVEPWGMGVRKGDTAM 231 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSN 284 N V+ M E G K ++ T +++R I+ Sbjct: 232 LNQVNKVLDGM---EASGQATKVFDKWFGTGTQFNMKRDFRIEAIKG 275 >gi|28210295|ref|NP_781239.1| cystine/glutamine-binding periplasmic protein [Clostridium tetani E88] gi|28202731|gb|AAO35176.1| cystine/glutamine-binding periplasmic protein [Clostridium tetani E88] Length = 272 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 60/281 (21%), Positives = 102/281 (36%), Gaps = 29/281 (10%) Query: 1 MYKD------FFVSILCLIILFFTSFSTNA--------SILGDIKKRGFLKCGINTGLVG 46 M K F VS+L +I + S S L IKK G LK G+N Sbjct: 1 MKKTLSILVVFLVSMLLIIGCGNKNTSNKGNDKNNKSLSTLEKIKKDGVLKMGLNDTYPP 60 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 + + GFDVD + ++ + K++ + + L+L+SK+ D++ Sbjct: 61 MEFRDESHNLVGFDVDLGKEIAKKLG---VKLEIITNDWSGIVLSLKSKKYDMILSTMSI 117 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFK 165 T R+ + + GQ ++ K K I V L G I Q GTT E++ Sbjct: 118 TEERKKEMNFSE--PYIVGGQKLVVKKDEKDIKKVEDLKGKVIGCQMGTTGEVSANKIEG 175 Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225 ++ V + R +A D + L R + V+L ++ P Sbjct: 176 IK----ELKKYDGVTQAFNDLSVGRINAVIADG-QVAGYYLK-KRSGDLVLLDTKLTSEP 229 Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 + + DT+ + V T ++ G K + Sbjct: 230 VGIGFRKEDTDIRDEVQKTLD---ELKKEGTLSKLSEKWFG 267 >gi|258406608|ref|YP_003199350.1| extracellular solute-binding protein family 3 [Desulfohalobium retbaense DSM 5692] gi|257798835|gb|ACV69772.1| extracellular solute-binding protein family 3 [Desulfohalobium retbaense DSM 5692] Length = 273 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 49/278 (17%), Positives = 106/278 (38%), Gaps = 28/278 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-------ILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M K + +++ + + + A L I K G L+ G + G + F Sbjct: 1 MAKQWLAALVVVFVCLGGLSAQAADIELAQKSTLERILKSGELRVGFDPGYMPFEMTDTK 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA--KERFLALQSKQIDILSRNTDWTLLRE 111 G + GFD+ + ++ ++ ++++P+N AL +K+ DI+ T R Sbjct: 61 GRYVGFDIALAKEMAKSMG-----VKFVPVNTDFDGIIPALLTKKFDIIISGITVTQERN 115 Query: 112 ISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGA--SICVQAGTTTELTLADYFKAH 167 + + GQ ++ K + + S L+ ++ + GTT E+ Y Sbjct: 116 LQINF--SDPYIVVGQTILLRKGLEEEVESYRDLNDGQYTVASRLGTTGEMAAKRYMPKA 173 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 + K +E+ + + DA+ D+ A+ + L + + PLA Sbjct: 174 DYK----SYEKEADGALEVLNGQVDAFVYDLP-FNAIFNAQQGKGKVAFLDEPFTYEPLA 228 Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 I +GD ++ +W + + + G + ++ Sbjct: 229 FGIRKGDPDFL---NWLNNFLRQIKNDGRYDRIYDKWF 263 >gi|256375607|ref|YP_003099267.1| extracellular solute-binding protein family 3 [Actinosynnema mirum DSM 43827] gi|255919910|gb|ACU35421.1| extracellular solute-binding protein family 3 [Actinosynnema mirum DSM 43827] Length = 274 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 52/252 (20%), Positives = 97/252 (38%), Gaps = 9/252 (3%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 +L TS + + ++G + G+ G + +G+ +GFD+D R +++ Sbjct: 12 ATAAVLALTSCGADDDTVLGRAEQGRITIGVAHDQPGLGLRRQDGNLRGFDIDVARYVAT 71 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 + S I ++ ++R L S ++D++ T R + A Y GQ Sbjct: 72 ELGVPESGITWVEAPPEDRERLLTSGEVDLVVNGYSITPKRREVIDFA--GPYYTAGQDL 129 Query: 130 IMH-KKKGISSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 ++ + I+ LS G +C GTT+ + D F + + R E A Sbjct: 130 LVLIDNQEITGPDSLSRGQRLCSVTGTTSAQYVKDTFAKN---VKLVEQPRFSECVTALL 186 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 A DA T D L P ++ + S+ + +G+ E + V+ Sbjct: 187 AGEVDALTTDDVVLAGYAAQ--NPELLRVVGEPFSEEEYGIGLPKGEQETKDAVTAALRK 244 Query: 248 MVTAEELGITQK 259 MV + E Q+ Sbjct: 245 MVDSGEWKRAQE 256 >gi|222083302|ref|YP_002542705.1| ABC transporter substrate binding protein (amino acid) [Agrobacterium vitis S4] gi|221738682|gb|ACM39520.1| ABC transporter substrate binding protein (amino acid) [Agrobacterium vitis S4] Length = 272 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 49/284 (17%), Positives = 103/284 (36%), Gaps = 13/284 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFD 60 K ++ + L A L DIK +G L CG F+ + G+D Sbjct: 1 MKILTLATTSALALIVGFGPALADRLDDIKTKGLLVCGTVPNYEPFSFPDPSTRQLVGYD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDFC A++ + K + ++ R L ++DIL+ + +TL R + + + Sbjct: 61 VDFCEAIAGKLG---VKFEMKTMSNDARIPELTEGRVDILTADLGYTLTR--AEQINYSY 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + + +G + + L+G I V G+T+E + + + + F+ Sbjct: 116 GYFMVPHRVAVRADRGFADLKSLAGKRIAVIKGSTSEG----FVRKSVENVNVVTFDDAP 171 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A + D ++ L + ++ + + +G+ Sbjct: 172 TGFLALVQGKVDGFSASFLVNARLISKAGDAAPLKLVDQAVGTETWGIGVRKGEDRLLGA 231 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSN 284 V A+V + G + ++ + T ++ I+K +N Sbjct: 232 VD---KALVDLDNSGEAENIHDKWLGEGTIYKQKKSFKIEKIAN 272 >gi|294629391|ref|ZP_06707951.1| amino acid ABC transporter, amino acid-binding protein [Streptomyces sp. e14] gi|292832724|gb|EFF91073.1| amino acid ABC transporter, amino acid-binding protein [Streptomyces sp. e14] Length = 350 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 44/260 (16%), Positives = 95/260 (36%), Gaps = 15/260 (5%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN---GDWKGFDVDFCRALSSAIF 72 + + + I++RG+L G++ + N G +GFD+D ++ I Sbjct: 83 SLAPSAADGPTVAAIRQRGYLSVGVDQNSYRWGYRNPNNASGALEGFDIDLAHRIAEDIL 142 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 D K+Q+ + ER A++S ++D++ R T + +AF + GQ + Sbjct: 143 GDGDKVQFRAIPTNERVNAIRSGRVDMVVRTMTITC--DRLDQVAFSAPYFLTGQQVLAP 200 Query: 133 KKKGISSVS-QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE---EIDAAYRA 188 + I+ L+G +C G+T L+ K + + V + + Sbjct: 201 RTSAITGYDKSLAGKRVCSATGSTAYDHLSADRKNGTLPASTDIGTTVPNQLDCLVRLQL 260 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 DA D + + + + +K A+ G ++V + + Sbjct: 261 GEVDAVVTDGALAASQAAQDPT---VQLKGGTFTKEYYGVAMKLGAD---DLVRQVNRIL 314 Query: 249 VTAEELGITQKNINQVSKDT 268 + G + + ++ T Sbjct: 315 DQYRKDGGWKASYDKWLSPT 334 >gi|320331821|gb|EFW87759.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 261 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 89/249 (35%), Gaps = 11/249 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 + +A+ L D+ RG LK + F V + +G D+D + L+ + Sbjct: 17 MLSQTPAHANGLDDVVARGTLKVAVPQDFPPFGSVGPDMKPRGLDIDTAQLLADQL---K 73 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 K++ P+N+ R L + ++D++ + RE + + ++ Sbjct: 74 VKLELTPVNSTNRIPFLTTGKVDLVISSLGKNPDREKVIDFSRAYAPFY--LAVFGPPDS 131 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 + ++ L G +I V G ++ L+ FE AAY A + D Sbjct: 132 PVKDIADLKGKTISVTRGAIEDIELSKVAPE---GATIKRFEDNNSTIAAYLAGQTDLIA 188 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL- 254 + A+ + P L + SP+ + +G E V A L Sbjct: 189 SGNVVMAAI--SERNPKRIPALKVKLKDSPVYVGVNKGQPELLGKVDEILNAAKADGALE 246 Query: 255 GITQKNINQ 263 +QK + Q Sbjct: 247 KASQKWLKQ 255 >gi|255325801|ref|ZP_05366893.1| bacterial extracellular solute-binding protein, family 3 [Corynebacterium tuberculostearicum SK141] gi|255297013|gb|EET76338.1| bacterial extracellular solute-binding protein, family 3 [Corynebacterium tuberculostearicum SK141] Length = 337 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 43/241 (17%), Positives = 91/241 (37%), Gaps = 12/241 (4%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 DI KRG L G++ + A GD +GF+VD R ++ IF DP+K+ + + + + Sbjct: 86 DIVKRGRLIVGVDRSNNLMSYRDAATGDVRGFEVDIAREIARDIFGDPNKVDFRFIESSD 145 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 R AL + +D++ R + RE + + ++ GI SV +G + Sbjct: 146 RVNALNTGAVDMIVRTMTISPERERDVAFSI--PYMNTQTRMLVLTNSGIKSVKDAAGKT 203 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 +C +T T+ ++ ++ + A + ++ D D + L + Sbjct: 204 LCGVGASTALETIREHAPKSDILIT----RSWGDCLMALQLNQADGIVVDDALLSGMAAQ 259 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQ--GDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 + S I+ + + A+ + ++ + + G + Sbjct: 260 D---SYTSIVGEPLETENYGVAVRRPSKQHNTRPLLRQVNSTLERIRRDGTWSSIFEEWL 316 Query: 266 K 266 Sbjct: 317 G 317 >gi|254504719|ref|ZP_05116870.1| Bacterial extracellular solute-binding protein, family 3 [Labrenzia alexandrii DFL-11] gi|222440790|gb|EEE47469.1| Bacterial extracellular solute-binding protein, family 3 [Labrenzia alexandrii DFL-11] Length = 262 Score = 160 bits (404), Expect = 3e-37, Method: Composition-based stats. Identities = 50/263 (19%), Positives = 108/263 (41%), Gaps = 11/263 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + + ++ L DI G +K F + A+G+++G+D Sbjct: 1 MLKRFAGLAGAAMAAVMLLAAPASAELKDILAAGKIKIATPENFPPFGALGADGEYEGYD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + ++ + + ++ +P+ +K+R L++ ++D++ R S+ + Sbjct: 61 IDVAKMIAEDLGVE---LELVPVTSKQRIPFLETDRVDLVIATLGANPERAKSIWFSHAY 117 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +F G +SS++ +G I V GT +L + + I F Sbjct: 118 APFFSGA--FAKPDVAVSSIADFAGKKIAVTGGTLEDLAITEDAP---DGAEIIRFGDNA 172 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 AAY + + D + AL ++ND P ++ II+ SP + G+ + Sbjct: 173 ATIAAYVSGQADVIVTGN--MVALGISNDNPEFNLEPKFIIANSPSFIGVKTGNMDLLQW 230 Query: 241 VS-WTHYAMVTAEELGITQKNIN 262 V+ + + + + G++ K + Sbjct: 231 VNVFVLHKKLNGKLNGLSVKWLK 253 >gi|256787709|ref|ZP_05526140.1| sugar-binding protein [Streptomyces lividans TK24] Length = 334 Score = 160 bits (404), Expect = 3e-37, Method: Composition-based stats. Identities = 43/266 (16%), Positives = 88/266 (33%), Gaps = 18/266 (6%) Query: 17 FTSFSTNASILGDIKKR-G---FLKCGINTGLVGFAEVKANG----DWKGFDVDFCRALS 68 + + I+ R G L G++ + N + +GFD+D ++ Sbjct: 59 LAPSGDDGPTIDRIRAREGEKRKLIVGVDQNSFRWGYRDPNSGGDAELEGFDIDLAHRIA 118 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 + D +Q+ + +R A+Q ++D++ R + +AF + GQ Sbjct: 119 KDVLGDEDAVQFKAIPTDQRVPAIQDGRVDMVVRTMTINC--DRLEDVAFSAPYFRTGQQ 176 Query: 129 FIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE---EIDA 184 + K I+ L+G IC AG+T TL K + + V + Sbjct: 177 VLAPKSSKITGYDGTLAGKEICTAAGSTALSTLEQDQKDGRLAEGVDLRTTVPNQLDCLV 236 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + DA D + + + + D + A+ + + V+ Sbjct: 237 RLQLGEVDAVVTDGALAASQAAQDPT---VELKGDAFTTEYYGVAMKKDADDLVRRVNRV 293 Query: 245 HYAMVTAEELGITQKNINQVSKDTTN 270 G Q + + +T + Sbjct: 294 LEQWRADRADG-WQHSYEEWLSETMD 318 >gi|283457668|ref|YP_003362253.1| amino acid ABC transporter/signal transduction system periplasmic protein [Rothia mucilaginosa DY-18] gi|283133668|dbj|BAI64433.1| ABC-type amino acid transport/signal transduction system, periplasmic component [Rothia mucilaginosa DY-18] Length = 276 Score = 160 bits (404), Expect = 3e-37, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 79/219 (36%), Gaps = 8/219 (3%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 ++ GI G + + GFDVD R ++ + +I+++ + R L + Sbjct: 34 KIRIGIKFDQPGLGYQDGS-QYTGFDVDVARYIAGKLGYSEDQIEFVESPSANRENMLNN 92 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAG 153 Q+D++ + R+ ++ A Y GQ ++ I L+G ++C G Sbjct: 93 GQVDMIFATYSISDSRKKTVDFA--GPYYTAGQDLLVRADNTDIHGPDDLNGKNLCSVTG 150 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 +T+ + D F + + + + A DA T D L L T + Sbjct: 151 STSAQKVQDKFAKN---VNLVKQNSYSDCVVALNGGVVDAVTTDDIILAGLAATKANKGK 207 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 ++ + + +G + V+ MV Sbjct: 208 LKVVGAPFTTERYGVGLPKGTDK-CEAVNKAINEMVADG 245 >gi|91789816|ref|YP_550768.1| extracellular solute-binding protein [Polaromonas sp. JS666] gi|91699041|gb|ABE45870.1| amino acid ABC transporter substrate-binding protein, PAAT family [Polaromonas sp. JS666] Length = 268 Score = 160 bits (404), Expect = 4e-37, Method: Composition-based stats. Identities = 56/264 (21%), Positives = 101/264 (38%), Gaps = 13/264 (4%) Query: 2 YKDFFVSILCLIILF---FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 K V+ + L +L TS +A + DI KRG +K G+ G V ++G+ G Sbjct: 4 KKILRVAAVGLTVLASVALTSTMASAQTVTDIIKRGKVKIGVLVGAPPMGAVDSSGNPVG 63 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 +D D ++ + ++ + L R AL+S ++D L T R ++ Sbjct: 64 YDADTAALIAKYLGVP---LEMVALEPPARIPALESGKVDFLVSTLAPTPERAKTVMFTI 120 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + G K + L G + V G++ E L + + + F+ Sbjct: 121 PYNAF--QVGIYAKKALKVKDWGDLKGKKVGVNRGSSVEAALVK--QEGLVGLKVVRFDT 176 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + A + + DA + A + RP + L SK P + A+ + E Sbjct: 177 DAAVIQAVFSGQIDACAEPDTM--ANQSLKARPDGDMALKFFFSKQPNSIAVRKDAFELQ 234 Query: 239 NIVSWTHYAMVTAEELG-ITQKNI 261 ++ T Y + EL I +K + Sbjct: 235 QWLNNTIYYIKVNGELDEIARKWV 258 >gi|296110977|ref|YP_003621358.1| glutamine ABC transporter, substrate binding protein [Leuconostoc kimchii IMSNU 11154] gi|295832508|gb|ADG40389.1| glutamine ABC transporter, substrate binding protein [Leuconostoc kimchii IMSNU 11154] Length = 288 Score = 160 bits (404), Expect = 4e-37, Method: Composition-based stats. Identities = 51/273 (18%), Positives = 109/273 (39%), Gaps = 22/273 (8%) Query: 5 FFVSILCLIILFFTSFST----NASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 +++ L +++ T+ + + L ++K G + G+ F + G +GF Sbjct: 16 VLAAVIVLGLMWATATAKKNEEHQDTLARVEKLGRIVWGVKADTRLFGLMDTKTGISQGF 75 Query: 60 DVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 D+D RA++ I P +++P+++ + +++ ID T RE + Sbjct: 76 DIDIARAITVQISKQTGVPMSAEFVPVSSSSKMQLIKNTNIDGSVSTMTITPEREKIIDF 135 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPI 174 + + GQ ++ K GI S+ ++ + +I V GTT L + M + Sbjct: 136 TNQ--YFDAGQSILVKKDSGIRSIKDMNDSKYTIIVVVGTTAATELKKFAPKAKM----L 189 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + A ++ + A + D + LY N E+ I + + P A Sbjct: 190 AVQDYATGMQALKSGQGQAMSTDNAILYGFATENP---EYHIAGEAFTHGPYGIAFDNNQ 246 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 ++ T+ A+ T +E G+ K + + + Sbjct: 247 KP---MIDETNKALATIKENGVYNKLVKKWFSN 276 >gi|239833796|ref|ZP_04682124.1| extracellular solute-binding protein [Ochrobactrum intermedium LMG 3301] gi|239821859|gb|EEQ93428.1| extracellular solute-binding protein [Ochrobactrum intermedium LMG 3301] Length = 258 Score = 160 bits (404), Expect = 4e-37, Method: Composition-based stats. Identities = 45/253 (17%), Positives = 94/253 (37%), Gaps = 12/253 (4%) Query: 2 YKDFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 K S++ I + A+ L +K+ G L+ G++ F+ V GFD Sbjct: 1 MKTLLSSLVAAGIGALMMLAPAQANDLEKVKQSGELRIGMSGVFPPFSFVDGQNQVVGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD ++ + P + L++ + D++ + T RE ++ A Sbjct: 61 VDIGTEIAKRLGVKPV---VVTTAFDGIIAGLRAGKFDVVVGSMSITPEREKAVDFA--G 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G+G + + I S+ +L G +I V G T++ + + ++ + Sbjct: 116 PYYRGGRGIFVTEASPIKSMDELKQGKTIAVTLGETSDKWARE-----QGGWTVRTYKGI 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E+ R+ R DA D + + + P++ + A+ +G+ E + Sbjct: 171 PELLLELRSGRVDAIASDDIPILIAIKESGEKVRQLDTPELQGTDNVGIALRKGNPELKD 230 Query: 240 IVSWTHYAMVTAE 252 ++ M Sbjct: 231 AINKALDDMKADG 243 >gi|307328497|ref|ZP_07607672.1| extracellular solute-binding protein family 3 [Streptomyces violaceusniger Tu 4113] gi|306885909|gb|EFN16920.1| extracellular solute-binding protein family 3 [Streptomyces violaceusniger Tu 4113] Length = 351 Score = 160 bits (404), Expect = 4e-37, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 87/268 (32%), Gaps = 21/268 (7%) Query: 20 FSTNASILGDIKKR-------GFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAI 71 S + + IK R L G++ + A GD GFD+D RA++ I Sbjct: 80 SSASGPAIKRIKNREVNGHKLNKLIAGVDQNSYRWGYRDPATGDLTGFDIDLVRAIAEDI 139 Query: 72 FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131 F DP + + + +R ALQ ++D++ R R + + + GQ ++ Sbjct: 140 FGDPDAVIFRTIPTSQRIKALQQGKVDVVVRTMTINCDRIKDVAFSTA--YFQAGQQVLV 197 Query: 132 HKKKGISSV-SQLSGASICVQAGTTTELTLA--DYFKAHNMKYHPIVFERVEEIDAAYRA 188 I+ L G +C G+T E L D H + + Sbjct: 198 ADDSSITGYNKTLRGKRVCTAQGSTAEAELDKPDTGAEHLGAIKVKPVPNQLDCLVRLQL 257 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 + DA D + + ++ + A+ + D + V+ Sbjct: 258 GQVDAVITDNALAAGQAAQDPS---VKLVGSRFTDEFYGVAMNKDDDDLVRRVNKVLENY 314 Query: 249 VTAEE----LGITQKNI-NQVSKDTTNP 271 + QK + S NP Sbjct: 315 RQGGAGSPWMQAYQKWLAKDFSTAQENP 342 >gi|217967439|ref|YP_002352945.1| extracellular solute-binding protein family 3 [Dictyoglomus turgidum DSM 6724] gi|217336538|gb|ACK42331.1| extracellular solute-binding protein family 3 [Dictyoglomus turgidum DSM 6724] Length = 257 Score = 160 bits (404), Expect = 4e-37, Method: Composition-based stats. Identities = 53/267 (19%), Positives = 99/267 (37%), Gaps = 16/267 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +S L +++ + A + IKK G LK G + F ++ + GFD Sbjct: 1 MRKGIIISFLFFLLVLYPVLGAGA--VERIKKVGVLKVGSDVAYAPFEFMEGD-KPVGFD 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + ++ A+ K+Q + + AL++K+ DI+ T R+ + + Sbjct: 58 IDIAQEIAKALG---VKLQVINTSFDGIIAALKAKKFDIIISAMTITEERKKEIDFSI-- 112 Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y GQ ++ + K I S L + VQ GTT ELT +K +E + Sbjct: 113 PYYDSGQIIVVRSENKDIKSEKDLKDKVVGVQLGTTGELTAKKLKDQIGIK-EIRSYETI 171 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E R DA D+ N + + + A+ + D + Sbjct: 172 PEAFMDLELGRLDAVINDLPVSLYYSKNNPK---LKCVGKPFTIEQYGIAVRKEDKDLLK 228 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSK 266 ++ + ++ G + + Sbjct: 229 KINEIL---INLKKTGKYNQIYKKWFG 252 >gi|288962583|ref|YP_003452878.1| polar amino acid transport system substrate-binding protein [Azospirillum sp. B510] gi|288914849|dbj|BAI76334.1| polar amino acid transport system substrate-binding protein [Azospirillum sp. B510] Length = 267 Score = 160 bits (404), Expect = 4e-37, Method: Composition-based stats. Identities = 38/260 (14%), Positives = 88/260 (33%), Gaps = 11/260 (4%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 ++L A L I K L+ + F V + G+D+D Sbjct: 12 LATAVLAGGFTATAPTHAKADALERIAKEKVLRVAVPQDFPPFGSVGTDLKPVGYDIDAA 71 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 ++ + +K++ +P+ + R L + ++D++ + RE + + ++ Sbjct: 72 TLIAKEMG---AKVELVPVTSTNRIPYLTTGKVDLVISSLGKNAEREKVIDFSTAYAPFY 128 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 +G + L+G ++ V G+ ++ L+ K +E + Sbjct: 129 NG--VFGPDDIAVEKAEDLNGKTVGVTRGSVEDIELSKIVS---DKVTVRRYEDNNGTIS 183 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 A+ + + A+ + P IL +I SP + + + V+ Sbjct: 184 AFLSGQVQLVATGNVVAAAI--FDRNPPRQPILKFLIKNSPCFVGLNKNEGPLLEKVNAI 241 Query: 245 HYAMVTAEELG-ITQKNINQ 263 L I +K ++ Sbjct: 242 IAKAKEDGSLNDIAKKWLHS 261 >gi|16262719|ref|NP_435512.1| ABC transporter periplasmic substrate-binding protein [Sinorhizobium meliloti 1021] gi|14523345|gb|AAK64924.1| ABC transporter, periplasmic solute-binding protein [Sinorhizobium meliloti 1021] Length = 265 Score = 160 bits (404), Expect = 4e-37, Method: Composition-based stats. Identities = 51/264 (19%), Positives = 103/264 (39%), Gaps = 12/264 (4%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + ++ L+ + + + +AS L DI R + G++ + F G Sbjct: 3 MRLKSLLLPLVGLLAITVGAATASASSLDDIIARKKVMIGVDLSVPPFGITNEEMQPDGL 62 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD + L+ + + ++ +P+ + R +LQ+ ++D + + E +L +AF Sbjct: 63 DVDVAKLLAKDLGVE---LELVPVTGQSRIPSLQTGKVDFVVASFGI--YTERALSVAFS 117 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I K+ I S++ L+G + V GT E L+ A+ + F+ Sbjct: 118 NPYGGHRSIIIAPKEATIKSLADLAGKRVGVPRGTAHEKILSA---ANVEGMELVRFDDD 174 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 A + + DA A +L P +S + + D + + Sbjct: 175 STTLNALVSGQVDAIGTVNYI--AAQLQERYPDRGFEEKTTYLQSFYGVGLRRNDPDLLH 232 Query: 240 IVSWTHYAMVTAEELG-ITQKNIN 262 ++ + + ELG I +K + Sbjct: 233 WLNTVLFVHKQSGELGAIYEKWMK 256 >gi|291451363|ref|ZP_06590753.1| sugar-binding protein [Streptomyces albus J1074] gi|291354312|gb|EFE81214.1| sugar-binding protein [Streptomyces albus J1074] Length = 321 Score = 160 bits (404), Expect = 4e-37, Method: Composition-based stats. Identities = 43/256 (16%), Positives = 85/256 (33%), Gaps = 14/256 (5%) Query: 22 TNASILGDIKKR----GFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPS 76 + L IK R L GI+ + A G +GFD+D RA++ + DP Sbjct: 67 AEGATLERIKSRTDKPRKLIVGIDQNSYRWGYRDPATGSLEGFDIDLVRAIAEELMGDPE 126 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 + + + R A+ S ++D++ R T + +AF + GQ ++ K Sbjct: 127 AVVFRAIPTNRRVQAIDSGEVDMVVRTMTITC--DRIKEVAFSTAYFETGQQLLVPKGSR 184 Query: 137 ISSVS-QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I+ L G +C AG+T L + + + + + DA Sbjct: 185 ITGHDTSLKGRKVCAAAGST---ALTELEREAHGADISTTVPNQLDCLVRLQLGEVDAVV 241 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D + + ++ + ++ A+ + + V+ Sbjct: 242 TDSALAAGQAAQDP---MVELVGEPFTEEFYGVAMHKDAKDLVARVNQVLVEYRKDGWER 298 Query: 256 ITQKNINQVSKDTTNP 271 K + + P Sbjct: 299 SYDKWLKDGMGKSPGP 314 >gi|238024846|ref|YP_002909078.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain-containing protein [Burkholderia glumae BGR1] gi|237879511|gb|ACR31843.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain protein [Burkholderia glumae BGR1] Length = 269 Score = 160 bits (404), Expect = 4e-37, Method: Composition-based stats. Identities = 46/240 (19%), Positives = 86/240 (35%), Gaps = 11/240 (4%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 + +A L I K G L+ + F V A+ +G+D+D L+ A+ +K+Q Sbjct: 30 SAAHADALDSITKSGVLRVAVPEDYPPFGSVGADMQPQGYDIDTAGLLAKALG---AKLQ 86 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+N+ R L + ++D++ + T RE + + YF QG +S Sbjct: 87 LVPVNSANRIPYLTTNKVDLVISSLGKTPEREKVIDFSAAYGPYF--QGVFGPADLKVSG 144 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L+G ++ G E+ L+ +K FE A+ + + Sbjct: 145 PADLTGKTVGATRGALEEIALSQMAPNATIK----RFEDNNATIQAFLSGQVQLIAAGNI 200 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 A+ P +I SP + + + V+ L K Sbjct: 201 VAAAILA--KNPPRRPETKFVIKNSPCFVGLNKNEPRLLAKVNAAIAQAKQNGTLDAISK 258 >gi|302534451|ref|ZP_07286793.1| sugar binding protein [Streptomyces sp. C] gi|302443346|gb|EFL15162.1| sugar binding protein [Streptomyces sp. C] Length = 336 Score = 160 bits (404), Expect = 4e-37, Method: Composition-based stats. Identities = 39/232 (16%), Positives = 80/232 (34%), Gaps = 10/232 (4%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 + + I+K G L G++ + +G GFD+D +A++ I + + Y Sbjct: 84 DGPAIERIRKAGKLVAGVDQNSFKWGYRNPDGHLDGFDIDLVKAIAKDILGNEDLVIYRA 143 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS- 141 + +R ALQ ++DI+ R R + + + GQ + K I+ Sbjct: 144 IPTSQRVPALQEGRVDIVVRTMTINCKRLEDVAFSTA--YFEAGQQVLAPKGSPITGYDA 201 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L G IC AG+T E L K+ + + + + + D + Sbjct: 202 SLKGRRICTAAGSTAEAAL----KSQSYGSVGVSVANQLDCLVRLQLGEVEGIITDNALA 257 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 + ++ ++ A+ + ++ V+ E Sbjct: 258 AGQAAQDPS---VQLVGAPFTREFYGVAMNKDASDLVRRVNKVLENYRAGGE 306 >gi|229490811|ref|ZP_04384646.1| glutamate binding protein [Rhodococcus erythropolis SK121] gi|229322201|gb|EEN87987.1| glutamate binding protein [Rhodococcus erythropolis SK121] Length = 276 Score = 160 bits (404), Expect = 4e-37, Method: Composition-based stats. Identities = 49/277 (17%), Positives = 91/277 (32%), Gaps = 12/277 (4%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 F + I+ + G L GI G + +G + GFDV+ Sbjct: 8 RFGIGIMAIAFAATACGGGEEKSASQSAADGTLTVGIKFDQPGLGQRNPDGTFSGFDVEV 67 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 R +++ + P I + + +R +Q+ ++D + T R+ +G A + Sbjct: 68 ARYIANELGVKPEGITFKESPSAQRETLIQNGEVDYIVATYSITDARKEKVGFA--GPYF 125 Query: 124 FDGQGFIMHKK-KGISSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 GQ ++ I+ LS G +C G+T + D F+ Sbjct: 126 IAGQSLLVRSDNTDITGRDSLSGGKKLCSVTGSTPAQKVKDSVP----DVQLQEFDTYSA 181 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A R DA T D L P + ++ + + + + D+E + Sbjct: 182 CVEALRNGAVDAVTTDDIILAGFAAQ--YPGQLKVVGEPFTTENYGVGLAKDDSETRGKI 239 Query: 242 SWTHYAMVT--AEELGITQKNINQVSKDTTNPDVQRF 276 + M++ A E P V R+ Sbjct: 240 NDAIEKMISTGAWEEAFNNTVGASGYPIPAPPTVDRY 276 >gi|153010817|ref|YP_001372031.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC 49188] gi|151562705|gb|ABS16202.1| extracellular solute-binding protein family 3 [Ochrobactrum anthropi ATCC 49188] Length = 258 Score = 160 bits (404), Expect = 4e-37, Method: Composition-based stats. Identities = 43/253 (16%), Positives = 95/253 (37%), Gaps = 12/253 (4%) Query: 2 YKDFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 K S++ + + +A L +K+ G L+ G++ F+ V GFD Sbjct: 1 MKTLLSSLIAAGVGALMMLAPAHADDLEKVKQSGELRIGMSGVFPPFSFVDGQNQVVGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD ++ + P + + L++ + D++ + T RE ++ A Sbjct: 61 VDIGTEIAKRLDVKPV---VVTIAFDGIIAGLRAGKFDVVVGSMSITPEREKAVDFA--G 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G+G + + + S+ +L G +I V G T++ + + ++ + Sbjct: 116 PYYRGGRGIFVTETSPVKSMDELKQGKTIAVTLGETSDKWARE-----QGGWTVRTYKGI 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E+ R+ R DA D + + + P++ + A+ +G+ E + Sbjct: 171 PELLLELRSGRVDAIASDDIPILIAIKESGEKVRQLDTPELQGTDNVGIALRKGNPELKD 230 Query: 240 IVSWTHYAMVTAE 252 ++ M Sbjct: 231 AINKALDDMKADG 243 >gi|222081074|ref|YP_002540437.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221725753|gb|ACM28842.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 275 Score = 160 bits (404), Expect = 4e-37, Method: Composition-based stats. Identities = 60/278 (21%), Positives = 106/278 (38%), Gaps = 15/278 (5%) Query: 1 MYKDFF--VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M I L ++ S S L I + L+CGI N + +G Sbjct: 1 MKNTILKTAMIATAFSLTLSAHSYAQSALDTIVQSKKLRCGIMLDSPPAGFRNTNNEPEG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDV +C+ +++A+ +P + + + +R AL S +ID+L +T T R +L +AF Sbjct: 61 FDVVYCKDMAAALGAEP---EIVETPSPDRIPALVSNRIDVLIASTTPTPKR--ALTVAF 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + G + K GI + + LS + G+T E L A+ K + Sbjct: 116 TQPYMNNTMGVVTRKDTGIKAYADLSSKKLGGVVGSTPEQLLNKEL-ANGWKDKGATYTG 174 Query: 179 V---EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 E A + + DA AL + P E VI + ++ A+ + D Sbjct: 175 YSTDAEAYLALQQGKVDAILVSFGVFNALAQSGQFP-EFVIAGEAPLSDMVSIAVRRDDQ 233 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 + +++W + G + Q + P + Sbjct: 234 Q---MLNWAKMFVWQQGVSGRFAEVYKQYFGNGPVPSL 268 >gi|146307037|ref|YP_001187502.1| cystine transporter subunit [Pseudomonas mendocina ymp] gi|145575238|gb|ABP84770.1| L-cystine-binding protein / Diaminopimelate-binding protein [Pseudomonas mendocina ymp] Length = 265 Score = 159 bits (403), Expect = 4e-37, Method: Composition-based stats. Identities = 53/270 (19%), Positives = 92/270 (34%), Gaps = 15/270 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + S+ ++ F+ S A +L DIK RG +K G+ F A+G GF+V Sbjct: 8 RRVLLGSLTLVLSSAFSLPSLAADLLDDIKARGAIKIGLEGTYPPFNYQDASGKLTGFEV 67 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + AL+ + K ++ P AL+SK++D++ + R Sbjct: 68 ELAEALAKELG---VKAEFQPTKWDGILAALESKRLDVVINQVTISDERRKKYDF--STP 122 Query: 122 TYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 G + K G I S L+G + V GT E L D + ++ Sbjct: 123 YTVSGIQALTRKADGDSIKSAQDLAGKKVGVGLGTNYEQWLKDNVPQAD----IRTYDDD 178 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 R D D L A ++ + + D S+ A+ +G+ + Sbjct: 179 PTKFQDLNVGRIDVILVDR--LAAFEMVDKTGGRLAVAGDAFSRQEAGIALRKGNPQLLA 236 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTT 269 + + L + D T Sbjct: 237 AIDEALAKLRADGTLKQLSE--KWFQADVT 264 >gi|326790342|ref|YP_004308163.1| ABC transporter periplasmic protein [Clostridium lentocellum DSM 5427] gi|326541106|gb|ADZ82965.1| ABC-type transporter, periplasmic subunit family 3 [Clostridium lentocellum DSM 5427] Length = 280 Score = 159 bits (403), Expect = 4e-37, Method: Composition-based stats. Identities = 56/272 (20%), Positives = 96/272 (35%), Gaps = 27/272 (9%) Query: 3 KDFFVSILCLIILFFTSFSTNASI----------LGDIKKRGFLKCGINTGLVGFAEVK- 51 K ++L + +L T + IK G LK G + F Sbjct: 6 KKIMATLLAVTMLGVLGSCTKTETSEAGGSATGGIQKIKDAGVLKVGCKIDVPSFGLQNT 65 Query: 52 ANGDWKGFDVDFCRALSSAIFD-------DPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 A G+++G ++D ++ IFD + + + + AK R L S +ID++ Sbjct: 66 ATGEYEGVEIDLAYEIAGKIFDCTAAEAKEKKLVAFQGVTAKTRGGLLDSGEIDLVIATF 125 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164 T R+ S Y D G ++ K GI S++ L G I V G+ T+ Y Sbjct: 126 TVTEERKESWNF--STPYYTDAVGLMVLKDSGIQSINDLDGKIIGVSQGSITKDGFEAYI 183 Query: 165 KAHNMKYHP--IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222 K + P F+ + A D + D + L +IL D + Sbjct: 184 KETGINVTPVFEEFDGYPALSTALSTKNIDVFAVDRAILAGY-----SDDSTMILEDRFA 238 Query: 223 KSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 + A + E V +V + ++ Sbjct: 239 EQDYGVASALSNKELAETVDGVVKGLVDSGKM 270 >gi|152985201|ref|YP_001351134.1| putative ABC transporter binding protein subunit [Pseudomonas aeruginosa PA7] gi|150960359|gb|ABR82384.1| probable binding protein component of ABC transporter [Pseudomonas aeruginosa PA7] Length = 266 Score = 159 bits (403), Expect = 5e-37, Method: Composition-based stats. Identities = 58/273 (21%), Positives = 107/273 (39%), Gaps = 17/273 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L + L + + A + D KRG L+ G++ + F G GF+ Sbjct: 1 MKKYLASLVLGVCALLGVASAQAAGAVEDAVKRGTLRVGMDPTYMPFEMTNKRGQIIGFE 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A++ ++ K++ + + AL + + D++ T R L L F Sbjct: 61 VDLLKAMAKSMG---VKLELVSTSYDGIIPALLTGKFDMIGSGMTLTQERN--LRLNFSE 115 Query: 121 ITYFDGQGFIMHK--KKGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVF 176 GQ ++ K + I S L+ SI + GTT E+ F Sbjct: 116 PFIVVGQTLLVRKELEGKIKSYKDLNDPQYSITSKIGTTGEIVARKLISKAKY----HGF 171 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + E + DA+ D S + ++ + V L + PLA + +GD Sbjct: 172 DNEPEAVMDVVNGKADAFIYD-SPYNVVAVSKFGAGKLVYLDQPFTYEPLAFGLKKGD-- 228 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 Y+ +++ + + E G Q+ ++ K+T Sbjct: 229 -YDSINFINNFLHQIREDGTYQRIHDKWFKNTE 260 >gi|227540882|ref|ZP_03970931.1| 3 family extracellular solute-binding protein [Corynebacterium glucuronolyticum ATCC 51866] gi|227183142|gb|EEI64114.1| 3 family extracellular solute-binding protein [Corynebacterium glucuronolyticum ATCC 51866] Length = 336 Score = 159 bits (403), Expect = 5e-37, Method: Composition-based stats. Identities = 55/238 (23%), Positives = 98/238 (41%), Gaps = 14/238 (5%) Query: 20 FSTNASIL-GDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSK 77 ST AS L DI KRG++ G+ + A G+ GF++D ++ IF DPSK Sbjct: 73 VSTPASELIPDIYKRGYIIVGVEQSQNLMSYRDLATGELIGFEIDLAHEIARDIFGDPSK 132 Query: 78 IQYLPLNAKERFLALQ---SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 + + ++A R AL ++++D++ R T R + + F + GF+ K Sbjct: 133 VAFRYVDAANREQALSAPPTERVDVVIRAMTMTKGR--ADNVDFSAPYFSTSAGFLTDKD 190 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 +++V L+ A++CV G+ + +A I + A + + DA Sbjct: 191 SPVTTVDDLNKATVCVAQGSINQYRVARIAPGA----TLITTLSWSDCLMALQQQQVDAV 246 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 D + L + + S VI + I QG+ V+ T ++ Sbjct: 247 FSDTALLAGMAAQDAYTSMTVISKER---DYYGIGIKQGNDNLTRQVNKTIERIIADG 301 >gi|163858766|ref|YP_001633064.1| solute-binding protein [Bordetella petrii DSM 12804] gi|163262494|emb|CAP44797.1| probable solute-binding protein [Bordetella petrii] Length = 276 Score = 159 bits (403), Expect = 5e-37, Method: Composition-based stats. Identities = 46/287 (16%), Positives = 104/287 (36%), Gaps = 17/287 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFD 60 +K+ + L L +A L +IK+RG L CG F+ G++ Sbjct: 3 FKNILKYVPLLACLGVAGV-AHADALANIKERGALVCGTLGTSEPFSFQDPKTRQVVGYE 61 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D C+A++ + K++ ++ R L ++D+++ N W+ + + + + Sbjct: 62 IDLCKAIADHLG---VKLEVKMISVAARIPELAGGRVDVVAANLGWSP--DRAKQIDYSY 116 Query: 121 ITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y Q ++ + + + + L+G + AG+++E + F+ Sbjct: 117 QHYVSPQKILIRRDDAGTLKTNADLAGKRVSAVAGSSSEAGAKRLIP----DVTTVTFKD 172 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEW 237 A + + + G L K + P + I+ D + P + +G+ Sbjct: 173 PPTAFMALQQKKVSGFVGSELMLLKFKQDAESSPVKLEIIEDPLFVEPWGIGMAKGEDGL 232 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSN 284 V+ E G Q ++ T +R +++ Sbjct: 233 RTEVNKVLSG---LEASGKMQVIFDRWFGPDTKFPTKRVFKVEEIKG 276 >gi|239918031|ref|YP_002957589.1| periplasmic component of amino acid ABC-type transporter/signal transduction system [Micrococcus luteus NCTC 2665] gi|281415790|ref|ZP_06247532.1| periplasmic component of amino acid ABC-type transporter/signal transduction system [Micrococcus luteus NCTC 2665] gi|239839238|gb|ACS31035.1| periplasmic component of amino acid ABC-type transporter/signal transduction system [Micrococcus luteus NCTC 2665] Length = 297 Score = 159 bits (403), Expect = 5e-37, Method: Composition-based stats. Identities = 38/219 (17%), Positives = 81/219 (36%), Gaps = 7/219 (3%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 L+ GI G + + GFD D R ++ + I+++ + R AL++ Sbjct: 53 LRIGIKFDQPGLGYREGSAQPTGFDTDVARYVADKLGVAEQDIEWVQTPSANRENALENG 112 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGT 154 ++D++ T R+ + A + GQ ++ I+ L G ++C G+ Sbjct: 113 EVDMIFATYSITDARKERVDFA--GPYFVAGQDLLVRADDTAITGPESLDGKNLCSVTGS 170 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T+ + D F + + + E + + DA T D L L + + Sbjct: 171 TSAQKIKDQFAS---GVNLVEQGGYAECVTYLESGQVDAVTTDDIILAGLAAADANKGKF 227 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 ++ + + + D+E ++ M + E Sbjct: 228 KVVGSTFTTERYGVGLPK-DSEHCEDINEAIKEMKDSGE 265 >gi|308235037|ref|ZP_07665774.1| extracellular solute-binding protein [Gardnerella vaginalis ATCC 14018] gi|311114714|ref|YP_003985935.1| glutamine ABC transporter binding protein [Gardnerella vaginalis ATCC 14019] gi|310946208|gb|ADP38912.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Gardnerella vaginalis ATCC 14019] Length = 290 Score = 159 bits (403), Expect = 5e-37, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 94/252 (37%), Gaps = 15/252 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 Y+ I L + S + S ++ GI G K +G + GFDV Sbjct: 22 YRAILSMICALCCVLPLSACSKNSRND------VIRIGIKFDQPGLGF-KKSGTYVGFDV 74 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D + ++ + +I + +K+R LQ+ +D++ T R+ ++ A Sbjct: 75 DVAKYVAKKLGYSEDRIVWKESPSKQREAMLQNGDVDMIVATYSITDARKNTVSFA--GP 132 Query: 122 TYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + GQ ++ K + +S L G +C G+T+ + + + + + K + Sbjct: 133 YFIAGQDLLVRKDEHKVSGPDDLDGKRLCSVTGSTSAIVIKEKYSS---KVQLMQQPGYA 189 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E A + DA T D L L + ++ ++ I +G+T+ Sbjct: 190 ECATALFSGIVDAVTTDDIILAGLATASR--GRLKLVSKPFTEEHYGIGIKKGNTKLAKR 247 Query: 241 VSWTHYAMVTAE 252 ++ M+ Sbjct: 248 INNALKDMIKNG 259 >gi|51244843|ref|YP_064727.1| glutamine ABC transporter, periplasmic substrate binding protein [Desulfotalea psychrophila LSv54] gi|50875880|emb|CAG35720.1| probable glutamine ABC transporter, periplasmic substrate binding protein [Desulfotalea psychrophila LSv54] Length = 284 Score = 159 bits (403), Expect = 5e-37, Method: Composition-based stats. Identities = 51/266 (19%), Positives = 102/266 (38%), Gaps = 16/266 (6%) Query: 4 DFFVSILCLIILFFTSFSTN-----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 ++++ +++ +F+ + +S L I K G L+ G+N F G G Sbjct: 16 KLCIAMVLTMVMSTCAFAADINLSKSSSLNTIVKNGELRIGLNASYPPFEMTNKQGRLIG 75 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDV+ + ++ ++ K++++ ++ AL S + D++ T R + + + Sbjct: 76 FDVELGKEIAKSMG---VKVKFVNMDFDGLIPALLSDKFDLIISGMTLTQQRNLKIAFSN 132 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSG--ASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + G M K+K I L+ I GTT E Y K F Sbjct: 133 PYVLMGQGIMVNMSKEKDIRLYRNLNKPEMKIVSCIGTTGEEAARKYLPKAQYK----SF 188 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 ++ + + R DA+ D+ L L+ + +L + + P+A QGD + Sbjct: 189 DQPSDSAQEVISGRADAFVYDLHVLEVLQKRMGG-DKTFLLKEPFTFEPMAIGFKQGDPD 247 Query: 237 WYNIVSWTHYAMVTAEE-LGITQKNI 261 N ++ + I K + Sbjct: 248 LTNFINNFLFQFKNDGRYERIYSKWL 273 >gi|297156741|gb|ADI06453.1| putative glutamate ABC transporter substrate-binding protein [Streptomyces bingchenggensis BCW-1] Length = 290 Score = 159 bits (402), Expect = 6e-37, Method: Composition-based stats. Identities = 42/253 (16%), Positives = 88/253 (34%), Gaps = 12/253 (4%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 ++S L +KRG L G G GFD++ + +++ + +I++ Sbjct: 41 DSSTLKAAQKRGKLIIGAKADQPYLGFEDTTGKRSGFDIEIAKMVAADLGFSEDQIEFKT 100 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVS 141 +++ R ++ Q+D R+ +G A Y G ++ +KGI+ Sbjct: 101 VDSNVRETSISKGQVDYYVGTYTINDERKKQVGFA--GPYYVAGADLLVRHDEKGITGAD 158 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 + G +C G+T + K + + DA T D + L Sbjct: 159 SVKGKKVCSIVGSTPLQEI----KKPKYGAKTTELGKYSLCVKQLLDGQVDAVTTDDAIL 214 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 RPS+ ++ ++ P + + D + +S + + G +K Sbjct: 215 KGYAAQ--RPSKLRVVGKPFTEEPYGIGMNKDDKALRDAISDALEKHI---KNGDYKKAY 269 Query: 262 NQVSKDTTNPDVQ 274 + + V Sbjct: 270 EGTLGKSGSAYVA 282 >gi|226366164|ref|YP_002783947.1| glutamate ABC transporter glutamate-binding protein [Rhodococcus opacus B4] gi|226244654|dbj|BAH55002.1| glutamate ABC transporter glutamate-binding protein [Rhodococcus opacus B4] Length = 277 Score = 159 bits (402), Expect = 6e-37, Method: Composition-based stats. Identities = 46/267 (17%), Positives = 90/267 (33%), Gaps = 12/267 (4%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 + ++ L ++ G L GI G +G + GFDV+ Sbjct: 11 IGVMALAVVASACGGGEEKSASQSASEGKLTVGIKYDQPGLGLRNPDGSFSGFDVEVAEY 70 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 ++ + P I++ + +R +Q+ ++D + T R+ + A + G Sbjct: 71 IAGKLGVAPENIEFKESPSAQRETLIQNGEVDYIVATYSITDARKEKVDFA--GPYFIAG 128 Query: 127 QGFIMHKK-KGISSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 Q ++ I+ L+ G +C G+T + D + F+ Sbjct: 129 QSLLVKSDNTDITGPESLNGGKKLCSVTGSTPAQKVKDQYAQ---DVQLQEFDTYSACVE 185 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 A R DA T D L P E ++ ++ + +GD E ++ Sbjct: 186 ALRNGAVDAVTTDDIILAGYAAQ--YPGELKVVGAPFTQERYGVGLAKGDDETRAKINDA 243 Query: 245 HYAMVTAEELGITQKNINQVSKDTTNP 271 AM+ G + N+ + P Sbjct: 244 IEAMIA---DGSWARAFNETVGASGYP 267 >gi|257481840|ref|ZP_05635881.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289624459|ref|ZP_06457413.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289651580|ref|ZP_06482923.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. aesculi str. 2250] gi|298485183|ref|ZP_07003277.1| ABC transporter amino acid-binding protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298160295|gb|EFI01322.1| ABC transporter amino acid-binding protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330866609|gb|EGH01318.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330886066|gb|EGH19967.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. mori str. 301020] gi|330986783|gb|EGH84886.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. lachrymans str. M301315] gi|331009475|gb|EGH89531.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 261 Score = 159 bits (402), Expect = 6e-37, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 89/249 (35%), Gaps = 11/249 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 + +A+ L D+ RG LK + F V + +G D+D + L+ + Sbjct: 17 MLSQTPAHANGLDDVVARGTLKVAVPQDFPPFGSVGPDMKPRGLDIDTAQLLADQL---K 73 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 K++ P+N+ R L + ++D++ + RE + + ++ Sbjct: 74 VKLELTPVNSTNRIPFLTTGKVDLVISSLGKNPDREKVIDFSRAYAPFY--LAVFGPPDS 131 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 + ++ L G +I V G ++ L+ FE AAY A + D Sbjct: 132 PVKDIADLKGKTISVTRGAIEDIELSKVAPE---GATIKRFEDNNSTIAAYLAGQTDLIA 188 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL- 254 + A+ + P L + SP+ + +G E V A L Sbjct: 189 SGNVVMVAI--SERNPKRIPALKVKLKDSPVYVGVNKGQPELLGKVDEILNAAKADGALE 246 Query: 255 GITQKNINQ 263 +QK + Q Sbjct: 247 KASQKWLKQ 255 >gi|297196054|ref|ZP_06913452.1| glutamate binding periplasmic protein [Streptomyces pristinaespiralis ATCC 25486] gi|297153047|gb|EDY67215.2| glutamate binding periplasmic protein [Streptomyces pristinaespiralis ATCC 25486] Length = 312 Score = 159 bits (402), Expect = 6e-37, Method: Composition-based stats. Identities = 38/247 (15%), Positives = 84/247 (34%), Gaps = 12/247 (4%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 ++ L +K G L G G+ GFD++ + +++ + KI++ Sbjct: 58 DSPTLEKAQKAGKLVIGAKNDQPFLGFEDEKGNRSGFDIEIAKMIAADLGFSADKIEFKT 117 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVS 141 ++ R A+ + ++D+ R+ + A Y G ++ + I+ Sbjct: 118 VDTGVREAAISNGEVDLYVGTYTINEERKKKVAFA--GPYYMAGADLLIREDDRTIAGPF 175 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L G ++C G+T + K + + E + DA T D + L Sbjct: 176 SLEGKTVCSAKGSTALREI----KKPEYNTRTVETAKYTECVQQLLEGKVDAVTTDDAIL 231 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 + ++ ++ P + + D + VS A +E G + Sbjct: 232 KGYAAQ--HAGKLKVVGQPFTEEPYGIGMAKDDEALRDAVSDALQAH---DENGDYKLAY 286 Query: 262 NQVSKDT 268 + + Sbjct: 287 DATLGLS 293 >gi|17230921|ref|NP_487469.1| glutamine-binding protein of glutamine ABC transporter [Nostoc sp. PCC 7120] gi|17132562|dbj|BAB75128.1| glutamine-binding protein of glutamine ABC transporter [Nostoc sp. PCC 7120] Length = 271 Score = 159 bits (402), Expect = 7e-37, Method: Composition-based stats. Identities = 41/229 (17%), Positives = 93/229 (40%), Gaps = 10/229 (4%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 +I+ ++ T +A+ + +I++RG++ + L A+G +G ++D Sbjct: 17 ILSAIIICFMISATGLVASAAEMPEIQRRGYITVAVKDNLPLLGFKDADGKLQGLEIDLA 76 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 + L++ + ++ P++ ++R + + ++DI T R + Y Sbjct: 77 KRLAADLLGKADAVKLQPVSNRDRLSVVFNHKVDIAIARVTATESRSRLVSF--SVPYYM 134 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 DG I K + ++ L+ I V ++T + Y + +E A Sbjct: 135 DGTYLIT-KDATVQQINDLAKRKIAVLNNSSTIAEVRYYIPKA----ELVGVNSYQEAQA 189 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 A + A+ D S L + ++ +LP +S +PL+ + +G Sbjct: 190 AIENNSVAAFAADGSLLSGWVREHP---QYRLLPTKLSTAPLSVVMPKG 235 >gi|330874081|gb|EGH08230.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 261 Score = 159 bits (402), Expect = 7e-37, Method: Composition-based stats. Identities = 48/258 (18%), Positives = 94/258 (36%), Gaps = 13/258 (5%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 + +A+ L D+ RG LK + F V + +G D+D + L+ + Sbjct: 17 MLSQTPAHANGLDDVVARGTLKVAVPQDFPPFGSVGPDMKPRGLDIDTAQLLADRL---K 73 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 K++ P+N+ R L + ++D++ + RE + + ++ Sbjct: 74 VKLELTPVNSTNRIPFLTTGKVDLVISSLGKNPDREKVIDFSRAYAPFY--LAVFGPPDS 131 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 + ++ L G +I V G ++ L+ FE AAY A + D Sbjct: 132 PVKDIADLKGKTISVTRGAIEDIELSKVAPE---GATIKRFEDNNSTIAAYLAGQTDLIA 188 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + A+ + P L + SP+ + +G E + V+ A A+ G Sbjct: 189 SGNVVMVAI--SERNPKRIPALKVKLKDSPVYVGVNKGQPELLSKVNEILNA---AKADG 243 Query: 256 ITQKNINQVSKDTTNPDV 273 +K K+ D+ Sbjct: 244 TLEKASVTWLKEPLPADL 261 >gi|227502018|ref|ZP_03932067.1| amino acid ABC superfamily ATP binding cassette transporter glutamin-binding protein [Corynebacterium accolens ATCC 49725] gi|227077302|gb|EEI15265.1| amino acid ABC superfamily ATP binding cassette transporter glutamin-binding protein [Corynebacterium accolens ATCC 49725] Length = 335 Score = 159 bits (402), Expect = 7e-37, Method: Composition-based stats. Identities = 43/241 (17%), Positives = 92/241 (38%), Gaps = 12/241 (4%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 DI KRG L G++ + A +GD +GF+VD ++ IF DP+K+ + + + + Sbjct: 85 DILKRGRLIVGVDRSNNLLSYRDAASGDVRGFEVDIAHEIARDIFGDPNKVDFRFVESSD 144 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 R AL + +DI+ R + RE + + ++ G++S+ G Sbjct: 145 RTAALDNGTVDIIVRTMTISPEREKEVAFSI--PYMTTQTRMLVLTSSGMNSIDDADGKR 202 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 +C G+T T+ + ++ + A + ++ D D + L + Sbjct: 203 LCGVRGSTALDTIRERAPQSDILIT----RSWGDCLMALQLNQADGVVVDDALLSGMAAQ 258 Query: 208 NDRPSEHVILPDIISKSPLAPA--IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 + S I+ + + A + D + ++ + + G ++ Sbjct: 259 D---SYTSIVGEPLKTENYGVAARLPNKDHDTRPLLRQVNSTLERIRRDGTWSDIFDRWL 315 Query: 266 K 266 Sbjct: 316 G 316 >gi|227489293|ref|ZP_03919609.1| family 3 extracellular solute-binding protein [Corynebacterium glucuronolyticum ATCC 51867] gi|227090753|gb|EEI26065.1| family 3 extracellular solute-binding protein [Corynebacterium glucuronolyticum ATCC 51867] Length = 336 Score = 159 bits (402), Expect = 7e-37, Method: Composition-based stats. Identities = 55/238 (23%), Positives = 98/238 (41%), Gaps = 14/238 (5%) Query: 20 FSTNASIL-GDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSK 77 ST AS L DI KRG++ G+ + A G+ GF++D ++ IF DPSK Sbjct: 73 VSTPASELIPDIYKRGYIIVGVEQSQNLMSYRDLATGELIGFEIDLAHEIARDIFGDPSK 132 Query: 78 IQYLPLNAKERFLALQ---SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 + + ++A R AL ++++D++ R T R + + F + GF+ K Sbjct: 133 VAFRYVDAANREQALSAPPTERVDVVIRAMTMTKGR--ADNVDFSAPYFSTSAGFLTDKD 190 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 +++V L+ A++CV G+ + +A I + A + + DA Sbjct: 191 SPVTTVDDLNKATVCVAQGSINQYRVARIAPGA----TLITTLSWSDCLMALQQQQVDAV 246 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 D + L + + S VI + I QG+ V+ T ++ Sbjct: 247 FSDTALLAGMAAQDAYTSMTVISEER---DYYGIGIKQGNDNLTRQVNKTIERIIADG 301 >gi|159037032|ref|YP_001536285.1| extracellular solute-binding protein [Salinispora arenicola CNS-205] gi|157915867|gb|ABV97294.1| extracellular solute-binding protein family 3 [Salinispora arenicola CNS-205] Length = 294 Score = 159 bits (402), Expect = 7e-37, Method: Composition-based stats. Identities = 39/234 (16%), Positives = 90/234 (38%), Gaps = 9/234 (3%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 S + + + +K G GF +G+ +GFDV+ + ++ + KI+++ Sbjct: 41 AAGSTMERLNEAQAIKIGTKFDQPGFGLKGLSGEPEGFDVEVAKIIAKELGIPEDKIEWV 100 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSV 140 +K R + ++ +D+++ R+ + A Y GQ ++ K I+ Sbjct: 101 EAPSKVREDVIVNETVDLVAATYTINPKRKERIAFA--GPYYEAGQNIMVRKDDTSITGP 158 Query: 141 SQLSG--ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + +C G+T + Y K ++ ++F+ ++ A + DA T D Sbjct: 159 DSFADGTKKVCSVTGSTPAEEIRTYVK--DVSSQLVLFDTYDKCRDALNGGQVDAVTTDN 216 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 L ++ + + + +K P + + D E+ + V+ Sbjct: 217 VILLGYIAKDE--ASFKLAGENFTKEPYGIGVKKDDAEFRDFVNDVLEKAFADG 268 >gi|309389821|gb|ADO77701.1| amino acid ABC transporter substrate-binding protein, PAAT family [Halanaerobium praevalens DSM 2228] Length = 264 Score = 159 bits (402), Expect = 7e-37, Method: Composition-based stats. Identities = 49/269 (18%), Positives = 99/269 (36%), Gaps = 12/269 (4%) Query: 1 MYKDFFVSILCLIILFFTSFST--NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + F S L L+++ F ST A L +IK++G + G++ +G+ G Sbjct: 1 MKNNLFKSFLVLVLVLFLCSSTVMAADSLVEIKEKGKMVVGLDDSFPPMGFRNDDGEIVG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD+D + + + + ++ ++ L+L++ ID++ T RE S+ + Sbjct: 61 FDIDLAKEAAKRLGVEA---EFKAVDWDGVILSLKNGMIDVIWNGLTITPAREKSIDFSQ 117 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + Q ++ K I + S L+ I +Q G++ + + F Sbjct: 118 --PYLENSQSIVVQKNSEIKNKSHLAAKVIGIQLGSSAVSAVESEPEVMASFKELRKFSN 175 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E R R +A D + RP + +L D + G + Sbjct: 176 NTEALMDLRTGRVEAVVLDKIV--GRYYMSKRPGQFRVLKDNFGAEKYGVGVRAGADSFR 233 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKD 267 ++ M+ E G + + + Sbjct: 234 KALNKVLTEMI---EDGTAAQISEKWFGE 259 >gi|111023727|ref|YP_706699.1| glutamate-binding protein precursor [Rhodococcus jostii RHA1] gi|110823257|gb|ABG98541.1| glutamate-binding protein precursor [Rhodococcus jostii RHA1] Length = 277 Score = 159 bits (402), Expect = 7e-37, Method: Composition-based stats. Identities = 44/267 (16%), Positives = 91/267 (34%), Gaps = 12/267 (4%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 + ++ L ++ G L GI G +G + GFDV+ Sbjct: 11 IGVMALAVVASACGGGEEKSASQSASEGKLTVGIKYDQPGLGLRNPDGSFSGFDVEVAEY 70 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 ++ + P +++ + +R +++ ++D + T R+ + A + G Sbjct: 71 VAGKLGVAPENVEFKESPSAQRETLIENGEVDYIVATYSITDARKEKVDFA--GPYFIAG 128 Query: 127 QGFIMHKK-KGISSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 Q ++ I+ L+ G +C G+T + D + F+ Sbjct: 129 QSLLVKSDNTDITGPDSLNGGKKLCSVTGSTPAQKVKDTYAQ---DVQLQEFDTYSACVE 185 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 A R DA T D L P E ++ + ++ + +GD E ++ Sbjct: 186 ALRNGAVDAVTTDDIILAGYAAQ--YPGELKVVGEPFTEERYGIGLAKGDDETRAKINDA 243 Query: 245 HYAMVTAEELGITQKNINQVSKDTTNP 271 AM+ G + N+ + P Sbjct: 244 IDAMIA---DGSWARAFNETVGASGYP 267 >gi|289771597|ref|ZP_06530975.1| sugar-binding protein [Streptomyces lividans TK24] gi|289701796|gb|EFD69225.1| sugar-binding protein [Streptomyces lividans TK24] Length = 352 Score = 159 bits (402), Expect = 7e-37, Method: Composition-based stats. Identities = 43/266 (16%), Positives = 88/266 (33%), Gaps = 18/266 (6%) Query: 17 FTSFSTNASILGDIKKR-G---FLKCGINTGLVGFAEVKANG----DWKGFDVDFCRALS 68 + + I+ R G L G++ + N + +GFD+D ++ Sbjct: 77 LAPSGDDGPTIDRIRAREGEKRKLIVGVDQNSFRWGYRDPNSGGDAELEGFDIDLAHRIA 136 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 + D +Q+ + +R A+Q ++D++ R + +AF + GQ Sbjct: 137 KDVLGDEDAVQFKAIPTDQRVPAIQDGRVDMVVRTMTINC--DRLEDVAFSAPYFRTGQQ 194 Query: 129 FIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE---EIDA 184 + K I+ L+G IC AG+T TL K + + V + Sbjct: 195 VLAPKSSKITGYDGTLAGKEICTAAGSTALSTLEQDQKDGRLAEGVDLRTTVPNQLDCLV 254 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + DA D + + + + D + A+ + + V+ Sbjct: 255 RLQLGEVDAVVTDGALAASQAAQDPT---VELKGDAFTTEYYGVAMKKDADDLVRRVNRV 311 Query: 245 HYAMVTAEELGITQKNINQVSKDTTN 270 G Q + + +T + Sbjct: 312 LEQWRADRADG-WQHSYEEWLSETMD 336 >gi|330872824|gb|EGH06973.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 261 Score = 159 bits (402), Expect = 7e-37, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 88/249 (35%), Gaps = 11/249 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 + +A+ L D+ RG LK + F V + +G D+D + L+ + Sbjct: 17 MLSQTPAHANGLDDVVARGTLKVAVPQDFPPFGSVGPDMKPRGLDIDTAQLLADQL---K 73 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 K++ P+N R L + ++D++ + RE + + ++ Sbjct: 74 VKLELTPVNNTNRIPFLTTGKVDLVISSLGKNPDREKVIDFSRAYAPFY--LAVFGPPDS 131 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 + ++ L G +I V G ++ L+ FE AAY A + D Sbjct: 132 PVKDIADLKGKTISVTRGAIEDIELSKVAPE---GATIKRFEDNNSTIAAYLAGQTDLIA 188 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL- 254 + A+ + P L + SP+ + +G E V A L Sbjct: 189 SGNVVMAAI--SERNPKRIPALKVKLKDSPVYVGVNKGQPELLGKVDEILNAAKADGALE 246 Query: 255 GITQKNINQ 263 +QK + Q Sbjct: 247 KASQKWLKQ 255 >gi|163855575|ref|YP_001629873.1| ABC transporter, substrate binding protein [Bordetella petrii DSM 12804] gi|163259303|emb|CAP41603.1| ABC transporter, substrate binding protein [Bordetella petrii] Length = 279 Score = 159 bits (402), Expect = 7e-37, Method: Composition-based stats. Identities = 53/259 (20%), Positives = 101/259 (38%), Gaps = 11/259 (4%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 T+ + ++S L + L+CGI + +G+DV +C+ ++ A+ Sbjct: 24 TAQAQSSSTLDRVINSKTLRCGIQLDYPPAGFRTPQNEPEGYDVAYCKDMAKALGATA-- 81 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 Q + + ER +L S +ID+L +T T R +S+ + +++ + + HK G+ Sbjct: 82 -QIVETPSAERIPSLVSNRIDVLIASTSITPQRALSVAFSQPYVSFINVA--MTHKDTGV 138 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKA-HNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 L G +I G+TTE L F ++ K I + E A + D Sbjct: 139 QKFDDLKGRTIGGVTGSTTEQELRAIFNKWNDPKGKFISYGSESEAFLALNQRKIDGLIV 198 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPL-APAIIQGDTEWYNIVSWTHYAMVTAEELG 255 AL + P+ I + S + L A+ + D ++ W + + G Sbjct: 199 SAGTAGALVKSGQFPA-LQIKGEAPSPADLVGIAVRKSDADFL---RWINVFVWNQVRTG 254 Query: 256 ITQKNINQVSKDTTNPDVQ 274 Q+ + P + Sbjct: 255 RYQELYRTYFGEGQAPALN 273 >gi|312621847|ref|YP_004023460.1| extracellular solute-binding protein family 3 [Caldicellulosiruptor kronotskyensis 2002] gi|312202314|gb|ADQ45641.1| extracellular solute-binding protein family 3 [Caldicellulosiruptor kronotskyensis 2002] Length = 266 Score = 158 bits (401), Expect = 8e-37, Method: Composition-based stats. Identities = 57/273 (20%), Positives = 101/273 (36%), Gaps = 26/273 (9%) Query: 13 IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72 + S N + L IKK G++ N + GFDVD ++ + Sbjct: 18 FLSGCASNDQNMTTLEKIKKTKEFVVGMDNTFPPMEFTDDNNNTVGFDVDLANEIAKKLG 77 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 +K++ + ++ AL+SK+ D + T R+ + + Q + Sbjct: 78 ---AKLKIVAVDWSGIQSALKSKKFDAIISCFSITDERKKA--FNLAGPYLYIRQVIAVK 132 Query: 133 K-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191 K I + L G I VQA TT + + K N + +ER+ + R Sbjct: 133 KGDSSIKNFEDLKGIKIGVQANTTGDNAVQK-MKFINYEKDVTRYERITDAFNDLDIGRI 191 Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 A D Y K P + I P + + P+ A+ + D + YN + Sbjct: 192 KAVVIDSVVAYYYKKQ--NPEKFDIAPAQLEREPVGIALRKEDKDLYNEI---------- 239 Query: 252 EELGITQKNINQVSKDTTNPDV-QRFLGIDKSS 283 QK ++Q+ KD T + +++ G D + Sbjct: 240 ------QKILDQLKKDGTIAKISEKWFGEDITK 266 >gi|328957171|ref|YP_004374557.1| putative amino acid ABC transporter, substrate-binding lipoprotein precursor [Carnobacterium sp. 17-4] gi|328673495|gb|AEB29541.1| putative amino acid ABC transporter, substrate-binding lipoprotein precursor [Carnobacterium sp. 17-4] Length = 265 Score = 158 bits (401), Expect = 8e-37, Method: Composition-based stats. Identities = 42/274 (15%), Positives = 91/274 (33%), Gaps = 16/274 (5%) Query: 1 MYKDFFVSILCL----IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K IL L ++ ++ I + G L G++ +NG+ Sbjct: 1 MKKTLATMILGLGFTVLVAGCSTNEARTDSYDQIIEEGKLIVGLDDTFAPMGFRDSNGEI 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFD+D + + D +++ P++ + L + ID++ T R+ + Sbjct: 61 VGFDIDLANEVGERLDLD---VEFQPIDWALKETELTNGNIDLIWNGYTITDERKKQVDF 117 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD---YFKAHNMKYHP 173 + Q I+ + I + LSG + Q ++ + Sbjct: 118 --SSPYLENSQIIIVLEDSEIQTKEDLSGKVVAAQQSSSAVDAINADESNIIEEFANEEV 175 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 +++ ++ + R DA D + N+ S + +L D + A + + Sbjct: 176 VLYPSNNDVFNDLASERSDAIVVDETLGRYYMNQNEDIS-YRVLEDNFGEEEYAVGMRKE 234 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 D + ++ M G K + + Sbjct: 235 DDKLTEAINQALEEMKA---DGTYDKIYAKWFAE 265 >gi|313673708|ref|YP_004051819.1| amino acid abc transporter substrate-binding protein, paat family [Calditerrivibrio nitroreducens DSM 19672] gi|312940464|gb|ADR19656.1| amino acid ABC transporter substrate-binding protein, PAAT family [Calditerrivibrio nitroreducens DSM 19672] Length = 264 Score = 158 bits (401), Expect = 8e-37, Method: Composition-based stats. Identities = 58/275 (21%), Positives = 117/275 (42%), Gaps = 21/275 (7%) Query: 2 YKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 K F++++ + +LF T F+ + S L I KRG +K G++T V +A +G+W GF+ Sbjct: 1 MKRIFLALIMIFMLFATGFAEDKKSTLDSIIKRGKMKVGMST-FVPWAMQTKSGEWIGFE 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + L+ + I+++P +L + DI+ T R + + + Sbjct: 60 IDVAKRLAKDMGVG---IEFVPTKWSGIIPSLLTGNYDIIIGGMGITPERALKVEFSI-- 114 Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + G + ++ K +S+ +L+ +I + GTT T +F +K +F+ Sbjct: 115 PYDYSGMAIVANRSKTKANSLKELNNPDVTIVARLGTTAAETAKKFFPRAQLK----LFD 170 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + R A+ + L A + + + +K P+ A+ +GD E+ Sbjct: 171 DEPQAIQELLNGRATAFIS-SAPLPAFLAIDHSSKLYQPVKGTFTKEPIGFAVRKGDQEF 229 Query: 238 YNIVS-W--THYAMVTAEELGIT---QKNINQVSK 266 N ++ W + EE K+ ++ K Sbjct: 230 LNYLNSWITVVSSEGWLEERKKYWFESKDWEKLLK 264 >gi|313124053|ref|YP_004034312.1| ABC amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280616|gb|ADQ61335.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 286 Score = 158 bits (401), Expect = 8e-37, Method: Composition-based stats. Identities = 45/260 (17%), Positives = 86/260 (33%), Gaps = 15/260 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSK 77 S S K+ + G+ F G +GF++D A++ I SK Sbjct: 30 CSSKQESSYARAKQSKQITWGVRPDTKLFGLTNIKTGKIEGFEIDLATAITKQILGPKSK 89 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 + P+ K R L + +D + T R + + + + I+ K I Sbjct: 90 AVFRPITEKTRITLLHNGSLDAVISTMTITKERMKVIDF--SDVYFNANESMIVKKSSKI 147 Query: 138 SSVSQLSGASICV--QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 S++ L+ + V GT +A ++K F+ A +A + D Sbjct: 148 RSIADLNKKGVVVIAIKGTDVANQVAKLAPKASVK----QFDDYGSAFNALKAGQGDVMI 203 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D L L E + +++ P + +G TE ++ G Sbjct: 204 DDNGILAGLIADTP---EFTLTKASLAEEPYGIGVEKGQTEMRQAINQALK---QLRANG 257 Query: 256 ITQKNINQVSKDTTNPDVQR 275 + + + + DV+ Sbjct: 258 KYDQLVKKWFGKVSGFDVKH 277 >gi|158316704|ref|YP_001509212.1| extracellular solute-binding protein [Frankia sp. EAN1pec] gi|158112109|gb|ABW14306.1| extracellular solute-binding protein family 3 [Frankia sp. EAN1pec] Length = 341 Score = 158 bits (401), Expect = 8e-37, Method: Composition-based stats. Identities = 45/257 (17%), Positives = 96/257 (37%), Gaps = 17/257 (6%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYL 81 + L I RG+L G+ F + G+++GFDVD + A+F +++ Sbjct: 96 DGPTLRKIADRGYLTVGVRPDTPPFGSRNPDTGEFEGFDVDLALLVGRALFGADGHVRFR 155 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 + +R ++ +D+++ T + + + F Y + ++ + ++ Sbjct: 156 AVTGADRVALVRDGTLDLVAATLTITC--DRADEVDFSAPYYLTAKAVLVLEDAPYQGLA 213 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L G +C AGTT+ + D + PI + A +A +A D + L Sbjct: 214 DLGGRRVCAAAGTTSLQQVVD----APSRPIPIQLASPADCLVAMQAGTVEAIVNDEAVL 269 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG----IT 257 + + E I+ + A+ + + V+ AE G I Sbjct: 270 VGMVEQDP---ETRIVGVGAFDVAMGIAVAKDAPDLTRFVNGVLE---QAERDGTWTVIH 323 Query: 258 QKNINQVSKDTTNPDVQ 274 ++ ++ V + P + Sbjct: 324 RRWLDGVRQPPPAPVYR 340 >gi|271967566|ref|YP_003341762.1| extracellular solute-binding protein [Streptosporangium roseum DSM 43021] gi|270510741|gb|ACZ89019.1| extracellular solute-binding protein [Streptosporangium roseum DSM 43021] Length = 305 Score = 158 bits (401), Expect = 9e-37, Method: Composition-based stats. Identities = 48/239 (20%), Positives = 86/239 (35%), Gaps = 12/239 (5%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 S + IK+RG L G + ++ G+ +GFD D +AL+ I +P K++ + Sbjct: 55 GSTMEKIKQRGELIVGGSLDAPLLSQQNPTTGEVEGFDADMGKALAKYIIGEP-KVKIVN 113 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVS 141 ++ R L + +D++ + T R + A Y G + K GI+ Sbjct: 114 SASETREALLSNGTVDVVFQTYTITPERAKQVAFA--GPYYSSGLSLAVRKGTAGIAKPE 171 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L+G ++ A T + + F E A + R D Y D L Sbjct: 172 DLNGKTVIAGANTPAIPAIKKLAPQA----KIVTFGSDPECMQALKQERGDVYVQDEMLL 227 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 A + ++ + P + GD ++ V+ + T KN Sbjct: 228 VANAQKDPS---VQVVGQPFTTDPYGIGLKHGDEQFKKFVNDWLKKIQGDGLWQQTWKN 283 >gi|268678766|ref|YP_003303197.1| extracellular solute-binding protein family 3 [Sulfurospirillum deleyianum DSM 6946] gi|268616797|gb|ACZ11162.1| extracellular solute-binding protein family 3 [Sulfurospirillum deleyianum DSM 6946] Length = 266 Score = 158 bits (401), Expect = 9e-37, Method: Composition-based stats. Identities = 56/273 (20%), Positives = 98/273 (35%), Gaps = 18/273 (6%) Query: 2 YKDFFVSILCLIILFFTS---FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 K ++L ++ L + S L I ++G L G+ G + F G+ G Sbjct: 1 MKKLLAALLVMLGLNAMADDINLWQKSTLNSILQKGELTVGLEPGYMPFEMKDKQGNVIG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD ++ A+ K++ +P L + + DI+ T R + + A Sbjct: 61 FDVDIANEMAKAMG---VKLKLVPTAWDGIIAGLLTGKYDIIISGMTITQERNLKINFAD 117 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVF 176 I+ GQ + KK S L +I + G T E+ FK F Sbjct: 118 PYIS--VGQTILAPKKHAGKKWSDLDKPEYTIVTKIGVTGEIATRKMFKKA----KIRTF 171 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E + D D A+ + V L D ++ PL A+ +GD + Sbjct: 172 ETEADAAQEVLNGNADGLVYDKP-YNAIFFAEKGGDKLVHLSDELTYEPLGFAVRKGDPD 230 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 + +W + + + G +K ++ T Sbjct: 231 FL---NWLNNFLNQTKNDGTYKKIYDRWFTQTA 260 >gi|150376017|ref|YP_001312613.1| extracellular solute-binding protein [Sinorhizobium medicae WSM419] gi|150030564|gb|ABR62680.1| extracellular solute-binding protein family 3 [Sinorhizobium medicae WSM419] Length = 268 Score = 158 bits (401), Expect = 1e-36, Method: Composition-based stats. Identities = 49/262 (18%), Positives = 94/262 (35%), Gaps = 9/262 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M L+ + +A L DI G L+C + N + GFD Sbjct: 1 MKTSIL--AFGLVAATALTSPAHADKLDDIIASGTLRCAVVLDFPPMGSRDENNEPIGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+C L+ A+ + + ER AL S ++D+ +T TL R ++G+ Sbjct: 59 VDYCNDLAKALGVTA---EIVETPFPERIPALMSGRVDVGVASTSDTLERAKTVGM--TV 113 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + ++K GI S + G + AGT + L + KA ++ Sbjct: 114 PYFAFEMAVTANEKSGIKSFEDMKGKVVGATAGTYEAIALENQVKAWGEG-EFRPYQTQA 172 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 ++ A + DA + + P V+ +A + + + N Sbjct: 173 DVFLALSQGQLDATVSTSTVAQSNVKGGKFPGISVVDKAPFDIDYVALFTNREEYGFINY 232 Query: 241 VS-WTHYAMVTAEELGITQKNI 261 ++ + + + T + +K + Sbjct: 233 LNLFVNQQVRTGRYAELYEKWV 254 >gi|126641445|ref|YP_001084429.1| ArtI protein [Acinetobacter baumannii ATCC 17978] Length = 212 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 51/212 (24%), Positives = 96/212 (45%), Gaps = 9/212 (4%) Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + ++ + D K++++ A R L+S + D++ T R+ + A Sbjct: 3 LAKRVTKDLLGDEKKVEFIVTEASNRVEFLKSNRADVVFATFTVTPERKEVVDFAE--PY 60 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 G + K K I+ ++QL G ++ V GT+++ YF H K + + FER + Sbjct: 61 LKGAFGIVSPKAKPITDIAQLEGKTLIVNKGTSSDT----YFTKHYPKVNLLKFERNSDA 116 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A R DA + D + YAL PS + I + +APA+ +G+T+ N ++ Sbjct: 117 FKALTDGRGDAISQDST--YALAWAAKNPSYVAGIQSIGDQEFIAPAVKKGNTQLLNWLN 174 Query: 243 WTHYAMVTAEEL-GITQKNINQVSKDTTNPDV 273 + T+ E+ I + + + D+ NP+V Sbjct: 175 TEIKQLRTSGEIKKIYDETLKPIYGDSVNPNV 206 >gi|116514325|ref|YP_813231.1| amino acid ABC transporter periplasmic protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116093640|gb|ABJ58793.1| amino acid ABC transporter substrate-binding protein, PAAT family [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 295 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 45/260 (17%), Positives = 85/260 (32%), Gaps = 15/260 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSK 77 S S K+ + G+ F G +GF++D A++ I SK Sbjct: 39 CSSKQESSYARAKQSKQITWGVRPDTKLFGLTNIKTGKIEGFEIDLATAITKQILGPKSK 98 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 + P+ K R L + +D + T R + + + + I+ K I Sbjct: 99 AVFRPITEKTRITLLHNGSLDAVISTMTITKERMKVIDF--SDVYFNANESMIVKKSSKI 156 Query: 138 SSVSQLSGASICV--QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 S++ L+ + V GT +A+ K F+ A +A + D Sbjct: 157 RSIADLNKKGVVVIAIKGT----DVANQVAKLASKASVKQFDDYGSAFNALKAGQGDVMI 212 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D L L E + +++ P + +G TE ++ G Sbjct: 213 DDNGILAGLIANTP---EFTLTKASLAEEPYGIGVEKGQTEMRQAINQALK---QLRANG 266 Query: 256 ITQKNINQVSKDTTNPDVQR 275 + + + + DV+ Sbjct: 267 KYDQLVKKWFGKVSGFDVKH 286 >gi|307316501|ref|ZP_07595944.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti AK83] gi|306897699|gb|EFN28442.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti AK83] Length = 268 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 49/262 (18%), Positives = 94/262 (35%), Gaps = 9/262 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M L+ + +A L DI G L+C + N + GFD Sbjct: 1 MKTSVL--AFGLVAATALTSPAHADKLDDIIASGTLRCAVVLDFPPMGSRDENNEPIGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+C L+ A+ + + ER AL S ++D+ +T TL R ++G+ Sbjct: 59 VDYCNDLARALGVTA---EIVETPFPERIPALMSGRVDVGVASTSDTLERAKTVGM--TV 113 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + ++K GI S + G + AGT + L + KA ++ Sbjct: 114 PYFAFEMAVTANEKSGIKSFEDMKGKVVGATAGTYEAIALENQVKAWGEG-EFRPYQTQA 172 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 ++ A + DA + + P V+ +A + + + N Sbjct: 173 DVFLALSQGQLDATVSTSTVAQSNVKGGKFPGISVVDKAPFDIDYVALFTNREEYGFLNY 232 Query: 241 VS-WTHYAMVTAEELGITQKNI 261 ++ + + + T + +K + Sbjct: 233 LNLFVNQQVRTGRYAELYEKWV 254 >gi|289705232|ref|ZP_06501631.1| bacterial extracellular solute-binding protein, family 3 [Micrococcus luteus SK58] gi|289557982|gb|EFD51274.1| bacterial extracellular solute-binding protein, family 3 [Micrococcus luteus SK58] Length = 297 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 37/219 (16%), Positives = 80/219 (36%), Gaps = 7/219 (3%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 L+ GI G + + GFD D R ++ + I+++ + R AL++ Sbjct: 53 LRIGIKFDQPGLGYREGSAQPTGFDTDVARYVADKLGVAEKDIEWVQTPSANRENALENG 112 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGT 154 ++D++ T R+ + A + GQ ++ I+ L G ++C G+ Sbjct: 113 EVDMIFATYSITDARKERVDFA--GPYFVAGQDLLVRADDTAITGPESLDGKNLCSVTGS 170 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T+ + D F + + + E + + DA T D L L + + Sbjct: 171 TSAQKIKDQFAS---GVNLVEQGGYAECVTYLESGQVDAVTTDDIILAGLAAADANKGKF 227 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 ++ + + + + +I + M + E Sbjct: 228 KVVGNTFTTERYGVGLPKDSERCEDI-NGAIKEMKDSGE 265 >gi|295107461|emb|CBL05004.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [Gordonibacter pamelaeae 7-10-1-b] Length = 274 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 46/215 (21%), Positives = 79/215 (36%), Gaps = 8/215 (3%) Query: 35 FLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 L+ G + GF G+ +G +VD R L+ I DP+ +Q +N R L Sbjct: 36 VLRVGTKIDVPGFGFQNPETGNIEGMEVDIARELAKRIKGDPNALQVTGVNVTTRGAMLD 95 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153 + +D T R+ S + Y D G ++ K GI+ ++ L G ++ V Sbjct: 96 NGTLDATLATFTITEARKKSYNFSR--PYYTDHIGVLVKKSSGITDLADLDGKTVGVALS 153 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 TT L + + E+ A R DA++ D S L Sbjct: 154 ATTRDKLTAAGDEIGIHMKFAEYSTYPEVKIALVTGRVDAFSVDRSILNGYV-----DDS 208 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 ++L + A + +T+ + + AM Sbjct: 209 TMLLDAQFAPQEYGVATKKSNTQLADQIDAAIGAM 243 >gi|330820140|ref|YP_004349002.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain protein [Burkholderia gladioli BSR3] gi|327372135|gb|AEA63490.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain protein [Burkholderia gladioli BSR3] Length = 269 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 46/245 (18%), Positives = 86/245 (35%), Gaps = 15/245 (6%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 F + + A L I K G L+ + F V A+ +G+D+D L+ ++ Sbjct: 27 FGANAAQADALDTITKSGTLRVAVPEDYPPFGSVGADMQPQGYDIDTAALLAKSLG---V 83 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 K+Q +P+N+ R L + ++D++ + T RE + + YF QG Sbjct: 84 KLQLVPVNSANRIPYLTTNKVDLVISSLGKTPDREKVIDFSAAYGPYF--QGVFGPADIK 141 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 ++ + L+G ++ G E+ L +K FE A+ + + Sbjct: 142 VAGPADLTGKTVGATRGALEEIALTQMAPNATIK----RFEDNNATIQAFLSGQVQLIAA 197 Query: 197 DISALYALKLTND--RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 A+ N RP ++ SP + + + V L Sbjct: 198 GNIVAAAILARNPPRRPETKFVIK----NSPCFVGLNKNEPRLLAKVDAAIAQAKKDGAL 253 Query: 255 GITQK 259 K Sbjct: 254 DTISK 258 >gi|107023050|ref|YP_621377.1| extracellular solute-binding protein [Burkholderia cenocepacia AU 1054] gi|105893239|gb|ABF76404.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia AU 1054] Length = 247 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 41/233 (17%), Positives = 83/233 (35%), Gaps = 11/233 (4%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L I K G L+ + F V + +G+D+D L+ ++ K++ +P+N+ Sbjct: 15 LDTIAKNGTLRVAVPEDYPPFGSVGTDMQPQGYDIDMAGLLAKSLG---VKLKLVPVNSA 71 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 R L + ++D++ + T RE + + YF QG +S+ + L+G Sbjct: 72 NRIPYLTTNKVDMVISSLGKTPEREKVIDFSSAYAPYF--QGVFGPSDVKVSTPADLTGK 129 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 ++ G E+ L+ +K FE A+ + + A+ Sbjct: 130 TVGATRGALEEIALSQLAPNATIK----RFEDNNATIQAFLSGQVQLIAAGNIVAAAILA 185 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 P + +I SP + + + + LG + Sbjct: 186 --KNPPRRPEVKFVIKNSPCFVGVNKNEPRLLAKIDDAIAHAKQDGSLGEMSR 236 >gi|257069405|ref|YP_003155660.1| amino acid-binding protein [Brachybacterium faecium DSM 4810] gi|256560223|gb|ACU86070.1| amino acid-binding protein [Brachybacterium faecium DSM 4810] Length = 290 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 43/234 (18%), Positives = 90/234 (38%), Gaps = 10/234 (4%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 ++ GI G + GD GFDV+ + ++ + +I+++ + R AL+ Sbjct: 45 VRIGIKYDQPGLGFREGGGDPTGFDVEVAKYVADELGYSEDQIEWVQTPSANRENALEGG 104 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGT 154 ++D++ T R+ + A + GQ ++ I+ L G ++C G+ Sbjct: 105 EVDMIIATYSITDERKERVDFA--GPYFVAGQDLLVRADDSEITGPEALDGKNLCSVTGS 162 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T+ + D + + E + + DA T D L L T + + Sbjct: 163 TSAQKIKDEYAE---GVQLVEQGGYAECVTYLESGQVDAVTTDDIILAGLAATPENSGKF 219 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 ++ + S I G +I + A+ +E G Q+ ++ ++ T Sbjct: 220 KVVGNPFSVERYGVGIPSGAETCGDI----NDAITKMKEEGTWQEVLDAATEGT 269 >gi|306836971|ref|ZP_07469921.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Corynebacterium accolens ATCC 49726] gi|304567154|gb|EFM42769.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Corynebacterium accolens ATCC 49726] Length = 339 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 43/241 (17%), Positives = 92/241 (38%), Gaps = 12/241 (4%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 DI KRG L G++ + A +GD +GF+VD ++ IF DP+K+ + + + + Sbjct: 89 DIVKRGRLIVGVDRSNNLLSYRDAASGDVRGFEVDIAHEIARDIFGDPNKVDFRFVESSD 148 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 R AL + +DI+ R + RE + + ++ G++S+ G Sbjct: 149 RTAALDNGTVDIIVRTMTISPEREKEVAFSI--PYMTTQTRMLVLTSSGMNSIDDADGKR 206 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 +C G+T T+ + ++ + A + ++ D D + L + Sbjct: 207 LCGVRGSTALDTIRERAPRSDILIT----RSWGDCLMALQLNQADGVVVDDALLSGMAAQ 262 Query: 208 NDRPSEHVILPDIISKSPLAPA--IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 + S I+ + + A + D + ++ + + G ++ Sbjct: 263 D---SYTSIVGEPLKTENYGVAARLPNKDHDTRPLLRQVNSTLERIRRDGTWSDIFDRWL 319 Query: 266 K 266 Sbjct: 320 G 320 >gi|54025807|ref|YP_120049.1| putative glutamate transporter glutamate-binding protein [Nocardia farcinica IFM 10152] gi|54017315|dbj|BAD58685.1| putative glutamate transporter glutamate-binding protein [Nocardia farcinica IFM 10152] Length = 277 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 48/249 (19%), Positives = 89/249 (35%), Gaps = 11/249 (4%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 + G L GI G +G + GFDV + ++ + P I + + +R Sbjct: 36 QEGKLTIGIKYDQPGLGLRTKDGAYTGFDVAVAQYVAGKLGVQPDGITFKEAPSAQRETL 95 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSG-ASIC 149 +++ Q+D + T R+ + A Y GQ ++ I+ V L+G +C Sbjct: 96 IENGQVDFVVATYSITDKRKEKVDFA--GPYYIAGQSLLVKADNTDITGVESLNGNKKLC 153 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 G+T + D + F+ A R DA T D L + Sbjct: 154 SVKGSTPAQNVKDKYAQ---DVQLQEFDTYSLCVEALRNGSVDAVTTDDIILAGFAAQS- 209 Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT-QKNI-NQVSKD 267 P + ++ + + +GD E + ++ AM+ Q+N+ Sbjct: 210 -PGQLKVVGQPFTTENYGIGLKKGDQETRDKINDAIEAMIADGSWAKALQENVGASGFTP 268 Query: 268 TTNPDVQRF 276 + P V R+ Sbjct: 269 SAPPQVDRY 277 >gi|257460304|ref|ZP_05625407.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] gi|257442369|gb|EEV17509.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] Length = 262 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 49/261 (18%), Positives = 109/261 (41%), Gaps = 17/261 (6%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V +L ++L F S A+ L IKK ++ G+ F+ + +G ++GF++ Sbjct: 3 VFVLAALLLGFLS----ANSLDQIKKDRLVRIGVYNDQPPFSAL-VDGKYRGFEIALGEK 57 Query: 67 LSSAIFDD-PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 L IF D P K++++P+ A R ALQ + D++ T R + + + Sbjct: 58 LGKEIFGDNPGKVKFIPITASRRISALQRNEADMVIATFTPTPARAKKVDFSE--PYFKV 115 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 G + K + ++S QL I V + + ++ + K + + A Sbjct: 116 QVGVLAKKDENVTSFDQLRKKRIFVIKHS----PIHNFLRKAGFKKNLNFCASSAKCYRA 171 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 ++ + + D L+A + +++ V+L + ++ A A+ +G+ +++ + Sbjct: 172 FKRAKNAVHVDDNLILHAYAIIDNKTQ--VVLDGLGKQTYNAIAVQKGNNALLELINTSL 229 Query: 246 YAMVTAEELGITQKNINQVSK 266 ++ G K + + Sbjct: 230 AG---LKKDGFLDKTFDDTLE 247 >gi|300859245|ref|YP_003784228.1| hypothetical protein cpfrc_01828 [Corynebacterium pseudotuberculosis FRC41] gi|300686699|gb|ADK29621.1| hypothetical protein cpfrc_01828 [Corynebacterium pseudotuberculosis FRC41] gi|302206936|gb|ADL11278.1| Bacterial extracellular solute-binding protein, family 3 [Corynebacterium pseudotuberculosis C231] Length = 323 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 56/262 (21%), Positives = 103/262 (39%), Gaps = 19/262 (7%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPS 76 T + + I++RG L GI+ + A G+ +GF+VD R +S IF DP+ Sbjct: 63 TGSDADPENIRKIRERGRLMVGIDQSQNLLSFRNTATGELQGFEVDLAREISRDIFGDPT 122 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 KI + ++A AL++ +D+ R+ T R + F + ++HK G Sbjct: 123 KIDFRYIDADTWVKALENNDVDLAIRSISIT--RGRQDQVFFSTPYFSGKTKLLVHKNSG 180 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 ISSV L G ++C A +T ++ + A + DA Sbjct: 181 ISSVDDLPGKTVCATAESTGAQRTRYVAPRA----KLLIVSSSADCLLALQQGHTDAVIS 236 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ----GDTEWYNIVSWTHYAMVTAE 252 D + L + + I+ + +++ A + D+E I+ + + Sbjct: 237 DDTILSGMLAQDP---FTEIVGNALAEEHYGIAFAKPGPRHDSE--GIIRHVNATIERIF 291 Query: 253 ELGITQKNINQVSKD---TTNP 271 G Q++ + D + NP Sbjct: 292 RGGTWQRSYAKWFGDYLPSQNP 313 >gi|119946083|ref|YP_943763.1| glutamine ABC transporter extracellular solute-binding family 3 protein [Psychromonas ingrahamii 37] gi|119864687|gb|ABM04164.1| ABC glutamine transporter extracellular solute-binding protein, family 3 [Psychromonas ingrahamii 37] Length = 263 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 45/262 (17%), Positives = 97/262 (37%), Gaps = 15/262 (5%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 ++ ++L FT S A+ L IKK G L+ + F V + +G+D+D Sbjct: 5 KVLGNVFTSLLLVFTIHSAQANQLESIKKAGVLRVAVPQDFPPFGSVGTDFKPQGYDIDM 64 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 L+ + +++ + + + R LQ++++D++ + RE + + + Sbjct: 65 AAYLADEL---NVELELVAVTSANRIPYLQTRKVDLVISSLGKNPEREAVIDFSSAYAPF 121 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 F G + +SS + L ++ V G+ +L L + +E Sbjct: 122 F--LGVFGTDNEMVSSPADLKNKTVGVTRGSVEDLELTKLVSS---TTTLQRYEDNNATL 176 Query: 184 AAYRAHRCDAYTGDISALY--ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +A+ + + + A + P +L SP +++GD + Sbjct: 177 SAFLSSQVSLIATGNLVIAEIATRFPEKAPKTKFLLK----NSPCYIGVMKGDAVLLKEI 232 Query: 242 SW-THYAMVTAEELGITQKNIN 262 + A G +QK + Sbjct: 233 NRLVAKAKQVGVLEGFSQKWLK 254 >gi|308277190|gb|ADO27089.1| ABC-type amino acid transport [Corynebacterium pseudotuberculosis I19] Length = 322 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 56/262 (21%), Positives = 103/262 (39%), Gaps = 19/262 (7%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPS 76 T + + I++RG L GI+ + A G+ +GF+VD R +S IF DP+ Sbjct: 62 TGSDADPENIRKIRERGRLMVGIDQSQNLLSFRNTATGELQGFEVDLAREISRDIFGDPT 121 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 KI + ++A AL++ +D+ R+ T R + F + ++HK G Sbjct: 122 KIDFRYIDADTWVKALENNDVDLAIRSISIT--RGRQDQVFFSTPYFSGKTKLLVHKNSG 179 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 ISSV L G ++C A +T ++ + A + DA Sbjct: 180 ISSVDDLPGKTVCATAESTGAQRTRYVAPRA----KLLIVSSSADCLLALQQGHTDAVIS 235 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ----GDTEWYNIVSWTHYAMVTAE 252 D + L + + I+ + +++ A + D+E I+ + + Sbjct: 236 DDTILSGMLAQDP---FTEIVGNALAEEHYGIAFAKPGPRHDSE--GIIRHVNATIERIF 290 Query: 253 ELGITQKNINQVSKD---TTNP 271 G Q++ + D + NP Sbjct: 291 RGGTWQRSYAKWFGDYLPSQNP 312 >gi|34556716|ref|NP_906531.1| binding component of ABC transporter [Wolinella succinogenes DSM 1740] gi|34482430|emb|CAE09431.1| BINDING COMPONENT OF ABC TRANSPORTER [Wolinella succinogenes] Length = 267 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 55/274 (20%), Positives = 102/274 (37%), Gaps = 18/274 (6%) Query: 1 MYKDFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + ++ + L S S L +I KRG L+ G+ G + F G+ GF Sbjct: 1 MKKIWLGILISVCTLLGADMSLWQKSTLNEIIKRGELRVGLEPGYLPFEMKDKKGNVIGF 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD R ++ A+ K++ +P + L +++ DI+ + R + + Sbjct: 61 DVDLAREMAKAMG---VKLKLVPTSWDGLIPGLVTEKFDIIISGMTISQERNLRVNFVE- 116 Query: 120 PITYFDGQGFIMHKK--KGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIV 175 GQ ++ K KG+ S L ++ + G + E FK Sbjct: 117 -PYIVVGQSLLVKKGLEKGVKSYKDLDKPELTLVTKFGVSAEYAAKRLFKNA----KLKT 171 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 ++ E + D + D+ A V L ++ PL AI +GD Sbjct: 172 YDTEAEAVQEVLNGKADMFIFDLPFNVAFMAQ-KGQGYLVHLDTSLTYEPLGWAIKKGDP 230 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 ++ +W ++ + + G + + DT Sbjct: 231 DFL---NWLNHFLAQIKHDGSYDELYERWFVDTK 261 >gi|327400781|ref|YP_004341620.1| ABC transporter periplasmic subunit family 3 [Archaeoglobus veneficus SNP6] gi|327316289|gb|AEA46905.1| ABC-type transporter, periplasmic subunit family 3 [Archaeoglobus veneficus SNP6] Length = 274 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 36/236 (15%), Positives = 84/236 (35%), Gaps = 13/236 (5%) Query: 34 GFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92 G L G++ F + +++GFDVD + + + +++++ + + L Sbjct: 50 GVLTVGMDATYPPFEYINETTDEFEGFDVDLMKEIGKRLG---LEVEFVNVAWEGIIPGL 106 Query: 93 QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQ 151 + + D + T R+ + + Q ++ I+ L+G + VQ Sbjct: 107 VAHKYDCICSAMTITEERKKQIDF--SDPYFEAWQVIVVRADCTDITKPEDLAGKVVGVQ 164 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 GTT + D K+ + + ++ + + DA D A K + P Sbjct: 165 IGTTGQFVAEDLVKS-GINFEIKTYDTTPDALLDLKNGNIDAVIIDNGV--AEKAIKNNP 221 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 + + +S A+ + + E ++ + +E G K + + Sbjct: 222 DVYKTVGGKLSYEEYGIAVAKDNPELLKAINQALKEV---KEDGTYDKIYQKWFGE 274 >gi|21221120|ref|NP_626899.1| sugar-binding protein [Streptomyces coelicolor A3(2)] gi|20520796|emb|CAB71196.2| putative sugar-binding protein [Streptomyces coelicolor A3(2)] Length = 352 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 42/266 (15%), Positives = 87/266 (32%), Gaps = 18/266 (6%) Query: 17 FTSFSTNASILGDIKKR----GFLKCGINTGLVGFAEVKANG----DWKGFDVDFCRALS 68 + + I+ R L G++ + N + +GFD+D ++ Sbjct: 77 LAPSGDDGPTIDRIRAREGEKRKLIVGVDQNSFRWGYRDPNSGGDAELEGFDIDLAHRIA 136 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 + D +Q+ + +R A+Q ++D++ R + +AF + GQ Sbjct: 137 KDVLGDEDAVQFKAIPTDQRVPAIQDGRVDMVVRTMTINC--DRLEDVAFSAPYFRTGQQ 194 Query: 129 FIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE---EIDA 184 + K I+ L+G IC AG+T TL K + + V + Sbjct: 195 VLAPKSSKITGYDGTLAGKEICTAAGSTALSTLEQDQKDGRLAEGVDLRTTVPNQLDCLV 254 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + DA D + + + + D + A+ + + V+ Sbjct: 255 RLQLGEVDAVVTDGALAASQAAQDPT---VELKGDAFTTEYYGVAMKKDADDLVRRVNRV 311 Query: 245 HYAMVTAEELGITQKNINQVSKDTTN 270 G Q + + +T + Sbjct: 312 LEQWRADRADG-WQHSYEEWLSETMD 336 >gi|319950339|ref|ZP_08024258.1| extracellular solute-binding protein family 3 [Dietzia cinnamea P4] gi|319436031|gb|EFV91232.1| extracellular solute-binding protein family 3 [Dietzia cinnamea P4] Length = 273 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 49/244 (20%), Positives = 93/244 (38%), Gaps = 14/244 (5%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 LK GI G +K ++ GFDVD R ++ + I+++ + +R L++ Sbjct: 34 LKVGIKFDQPGLG-LKEGNEYTGFDVDVARYIAEKLGTAEDDIEWIQAPSAQRETLLETG 92 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGT 154 Q+D++ T R+ +G A + GQ ++ I+ L G +C G+ Sbjct: 93 QVDMIVATYSITDSRKEKVGFA--GPYFIAGQDLLVRADDDSITGPDSLDGKRLCSVTGS 150 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T+ T+ + + F E +A ++ DA T D + L + + Sbjct: 151 TSAQTVKEKVP----GVNLQEFGTYSECVSALVSNAVDALTTDDTILAGYASQDQYQGQL 206 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV------TAEELGITQKNINQVSKDT 268 ++ ++ I +GDTE ++ M+ TA E + + Sbjct: 207 KVVGAPFTEERYGVGIAKGDTEKCEQINEAIREMISDGSWDTAVEENLGAAGFTPGEGNP 266 Query: 269 TNPD 272 PD Sbjct: 267 PEPD 270 >gi|300811731|ref|ZP_07092205.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497307|gb|EFK32355.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 286 Score = 158 bits (399), Expect = 2e-36, Method: Composition-based stats. Identities = 45/260 (17%), Positives = 85/260 (32%), Gaps = 15/260 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSK 77 S S K+ + G+ F G +GF++D A++ I SK Sbjct: 30 CSSKQESSYARAKQSKQITWGVRPDTKLFGLTNIKTGKIEGFEIDLATAITKQILGPKSK 89 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 + P+ K R L + +D + T R + + + + I+ K I Sbjct: 90 AVFRPITEKTRITLLHNGSLDAVISTMTITKERMKVIDF--SDVYFNANESMIVKKSSKI 147 Query: 138 SSVSQLSGASICV--QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 S++ L+ + V GT +A+ K F+ A +A + D Sbjct: 148 RSIADLNKKGVVVIAIKGT----DVANQVAKLASKASVKQFDDYGSAFNALKAGQGDVMI 203 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D L L E + +++ P + +G TE ++ G Sbjct: 204 DDNGILAGLIADTP---EFTLTKASLAEEPYGIGVEKGQTEMRQAINQALK---QLRANG 257 Query: 256 ITQKNINQVSKDTTNPDVQR 275 + + + + DV+ Sbjct: 258 KYDQLVKKWFGKVSGFDVKH 277 >gi|206896514|ref|YP_002246907.1| glutamine-binding protein [Coprothermobacter proteolyticus DSM 5265] gi|206739131|gb|ACI18209.1| glutamine-binding protein [Coprothermobacter proteolyticus DSM 5265] Length = 254 Score = 158 bits (399), Expect = 2e-36, Method: Composition-based stats. Identities = 52/274 (18%), Positives = 101/274 (36%), Gaps = 22/274 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + F + ++ IL S +A+ L G + NG++ GFD Sbjct: 1 MKRTFVLLLVVGAILLGCSSQQSANTL---------VVGTAADFPPLEFIDENGNFAGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ A++ I + +++ + +LQ+ + D + T R+ + + Sbjct: 52 IELMNAIAEKIGYE---VKWENADFAGLVASLQTGKYDAVISAMTITASRQEEVDFSR-- 106 Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Q ++ + GI S L+ +I VQ GTT EL + Y +E Sbjct: 107 PYFRSDQAVVVQESNVGILSREDLADKTIGVQLGTTGELLARELVSDKGGVYT---YESP 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 ++ R DA D+ L N V I ++ A+ +G+TE Sbjct: 164 DQAFLDLNTGRLDAVVNDLPVSSYFLLRNPNLPLKVAF-TIETEEYYGIAVKKGNTEL-- 220 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 V + A++ +E G + + + D+ Sbjct: 221 -VEKINNALIQLKEEGKYAELYQKWFETEPPADI 253 >gi|16264001|ref|NP_436793.1| putative ABC transporter periplasmic amino acid-binding protein [Sinorhizobium meliloti 1021] gi|307300146|ref|ZP_07579931.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti BL225C] gi|15140125|emb|CAC48653.1| putative ABC transporter periplasmic amino acid-binding protein [Sinorhizobium meliloti 1021] gi|306905035|gb|EFN35618.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti BL225C] Length = 268 Score = 158 bits (399), Expect = 2e-36, Method: Composition-based stats. Identities = 49/262 (18%), Positives = 95/262 (36%), Gaps = 9/262 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M L+ + +A L DI G L+C + N + GFD Sbjct: 1 MKTSVL--AFGLVAATALTSPAHADKLDDIIASGTLRCAVVLDFPPMGSRDENNEPIGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+C L++A+ + + ER AL S ++D+ +T TL R ++G+ Sbjct: 59 VDYCNDLATALGVTA---EIVETPFPERIPALMSGRVDVGVASTSDTLERAKTVGM--TV 113 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + ++K GI S + G + AGT + L + KA ++ Sbjct: 114 PYFAFEMAVTANEKSGIKSFEDMKGKVVGATAGTYEAIALENQVKAWGEG-EFRPYQTQA 172 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 ++ A + DA + + P V+ +A + + + N Sbjct: 173 DVFLALSQGQLDATVSTSTVAQSNVKGGKFPGISVVDKAPFDIDYVALFTNREEYGFLNY 232 Query: 241 VS-WTHYAMVTAEELGITQKNI 261 ++ + + + T + +K + Sbjct: 233 LNLFVNQQVRTGRYAELYEKWV 254 >gi|297191653|ref|ZP_06909051.1| glutamate binding protein [Streptomyces pristinaespiralis ATCC 25486] gi|197721587|gb|EDY65495.1| glutamate binding protein [Streptomyces pristinaespiralis ATCC 25486] Length = 278 Score = 158 bits (399), Expect = 2e-36, Method: Composition-based stats. Identities = 47/277 (16%), Positives = 88/277 (31%), Gaps = 21/277 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG------FLKCGINTGLVGFAEVKANG 54 M + ++ S + S K+ G + GI G +G Sbjct: 1 MKLRKVTAASATVLALALSATACGS--DSGKESGSGDGGDKITIGIKYDQPGLGLKTPDG 58 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + GFDVD ++ + I++ + +R AL +D ++ T R+ + Sbjct: 59 -FTGFDVDVATYVAKELGYAEDDIEFKETKSADRETALARGDVDFIAATYSITDERKQKV 117 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 A Q ++ +S L+G +C G+T+ + F Sbjct: 118 DFA--GPYLLAHQDLLIRADDNVSKGDDLNGKKLCSVTGSTSAQNVKAKFA---PDAQLQ 172 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 E ++ DA T D S L + + +S + +GD Sbjct: 173 QVGTYSECLNGLQSGAVDALTTDDSILAGYASQEQYKGKFKLAGLKLSNENYGIGVKKGD 232 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 E + ++ MV K+ ++ KD P Sbjct: 233 KEMVDKINAALEKMVQD-------KSWDKAVKDNFGP 262 >gi|104774237|ref|YP_619217.1| glutamine-binding protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103423318|emb|CAI98159.1| Glutamine-binding protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 292 Score = 158 bits (399), Expect = 2e-36, Method: Composition-based stats. Identities = 45/260 (17%), Positives = 85/260 (32%), Gaps = 15/260 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSK 77 S S K+ + G+ F G +GF++D A++ I SK Sbjct: 36 CSSKQESSYARAKQSKQITWGVRPDTKLFGLTNIKTGKIEGFEIDLATAITKQILGPKSK 95 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 + P+ K R L + +D + T R + + + + I+ K I Sbjct: 96 AVFRPITEKTRITLLHNGSLDAVISTMTITKERMKVIDF--SDVYFNANESMIVKKSSKI 153 Query: 138 SSVSQLSGASICV--QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 S++ L+ + V GT +A+ K F+ A +A + D Sbjct: 154 RSIADLNKKGVVVIAIKGT----DVANQVAKLASKASVKQFDDYGSAFNALKAGQGDVMI 209 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D L L E + +++ P + +G TE ++ G Sbjct: 210 DDNGILAGLIADTP---EFTLTKASLAEEPYGIGVEKGQTEMRQAINQALK---QLRANG 263 Query: 256 ITQKNINQVSKDTTNPDVQR 275 + + + + DV+ Sbjct: 264 KYDQLVKKWFGKVSGFDVKH 283 >gi|325685933|gb|EGD27997.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 289 Score = 158 bits (399), Expect = 2e-36, Method: Composition-based stats. Identities = 46/260 (17%), Positives = 87/260 (33%), Gaps = 15/260 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSK 77 S S K+ + G+ F G +GF++D A++ I SK Sbjct: 33 CSSKQESSYARAKQSKQITWGVRPDTKLFGLTNIKTGKIEGFEIDLATAITKQILGPKSK 92 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 + P+ K R L + +D + T R + + + + I+ K I Sbjct: 93 AVFRPITEKTRITLLHNGSLDAVISTMTITKERMKVIDF--SDVYFNANESMIVKKSSKI 150 Query: 138 SSVSQLSGASICV--QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 S++ L+ + V GT +A+ K F+ A +A + D Sbjct: 151 RSIADLNKKGVVVIAIKGT----DVANQVAKLAPKARVKQFDDYGSAFNALKAGQGDVMI 206 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D L L E + +++ P + +G TE ++ A+ G Sbjct: 207 DDNGILAGLIADTP---EFTLTKASLAEEPYGIGVEKGQTEMRQAIN---LALKQLRANG 260 Query: 256 ITQKNINQVSKDTTNPDVQR 275 + + + + DV+ Sbjct: 261 KYDQLVKKWFGKVSGFDVKH 280 >gi|326779309|ref|ZP_08238574.1| ABC-type transporter, periplasmic subunit family 3 [Streptomyces cf. griseus XylebKG-1] gi|326659642|gb|EGE44488.1| ABC-type transporter, periplasmic subunit family 3 [Streptomyces cf. griseus XylebKG-1] Length = 346 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 40/242 (16%), Positives = 79/242 (32%), Gaps = 15/242 (6%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFD 73 S + + IK+RG L G++ + + +GFD+D RA++ + Sbjct: 71 ASLPPSSADGPGIEKIKQRGKLIAGVDQNSFRWGYRNPEARELEGFDIDLVRAIAKDVLG 130 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 DP + + + +R AL++ ++D++ R R + + + GQ + K Sbjct: 131 DPDAVIFRAIPTNQRIAALENDRVDVVVRTMTINCKRLEQVSFSTA--YFQAGQQVLAPK 188 Query: 134 KKGISSVS-QLSGASICVQAGTTTELTL---------ADYFKAHNMKYHPIVFERVEEID 183 I+ L G +C G+T L D F + + Sbjct: 189 GSTITGYDASLKGKRVCSAEGSTAYEALEKKSFGALYKDDFDGTARDPDLLTVPNQLDCL 248 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 + DA D + P+ + + A +G + V+ Sbjct: 249 VRLQLGEVDAVVTDNALAAGQAAQ--DPAVELKGKAPFTTEYYGVATKKGADDLVARVNK 306 Query: 244 TH 245 Sbjct: 307 VL 308 >gi|323701356|ref|ZP_08113030.1| extracellular solute-binding protein family 3 [Desulfotomaculum nigrificans DSM 574] gi|323533615|gb|EGB23480.1| extracellular solute-binding protein family 3 [Desulfotomaculum nigrificans DSM 574] Length = 278 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 48/249 (19%), Positives = 93/249 (37%), Gaps = 15/249 (6%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 T + IK++G + G++ + +G +GFD+D ++ + KIQ+ Sbjct: 40 TEKNTWEQIKEKGVMVVGLDNTFAPMGF-EKDGKLQGFDIDMGEEMAKRLG---IKIQWQ 95 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSV 140 P AL SK+ D++ T R+ + + DGQ + K G ++ Sbjct: 96 PTQWDGVIPALLSKRFDVVISGMTITDERKKQIDFSI--PYVADGQVMAVKKGTTGFNTA 153 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + L G + Q ++ E + K +++ E A + R D Sbjct: 154 ADLKGKVVGTQENSSGEEAVNKIEGIKEKK----LYKTYPEAFADLQIGRIPVVVVDR-- 207 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 + A +RP ++ + +++ P I + D E + M L T+ + Sbjct: 208 VTAEYYLAERPGAFEVVGEQLTQEPFGIGIRKTDPELKAAIDKVLTDMQKDGTL--TKIS 265 Query: 261 INQVSKDTT 269 + KD T Sbjct: 266 MKWFKKDIT 274 >gi|294679058|ref|YP_003579668.1| polar amino acid ABC transporter periplasmic polar amino acid-binding protein [Rhodobacter capsulatus SB 1003] gi|294477874|gb|ADE87261.1| polar amino acid ABC transporter, periplasmic polar amino acid-binding protein [Rhodobacter capsulatus SB 1003] Length = 278 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 43/273 (15%), Positives = 99/273 (36%), Gaps = 16/273 (5%) Query: 7 VSILCLIILFFTSFSTNASIL----GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + L L + S + A IK+ G ++ G+ F +G G +++ Sbjct: 8 LGALLLAGVTALSGAAQAQDFPPLPAAIKEAGKIRIGVKCDSPPFGASGPDGKPLGIEIE 67 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 R + + F + + + ++ R +L S ++D++ T R + + I Sbjct: 68 MARKIGTFAFGSEAGAELSCVTSEARIPSLNSGKLDLILATLGRTPARM--DVIDYSDIY 125 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 ++ ++ + +++ LSG ++ V G T L A+ + + Sbjct: 126 FWGSSNVLVPADSPVKTLADLSGKTVIVVKGATQIKWLE----ANIPGIEILQLNTTADG 181 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A + R D + GD +Y L E ++ + + + + + E V Sbjct: 182 VQALKQGRADGFVGDGGLVYTLA---GNYPETRVVEEGLDLGVNGIGLRKNEPELKAFVD 238 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 A+ + G ++ I + K+ +V + Sbjct: 239 ---AALDELRKDGFYERVIPEFVKEPAVAEVMK 268 >gi|257125932|ref|YP_003164046.1| extracellular solute-binding protein family 3 [Leptotrichia buccalis C-1013-b] gi|257049871|gb|ACV39055.1| extracellular solute-binding protein family 3 [Leptotrichia buccalis C-1013-b] Length = 262 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 50/273 (18%), Positives = 101/273 (36%), Gaps = 17/273 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K + IL L + + I K+ + G++ V G+ Sbjct: 1 MKKMLLLMILALSVFMCSVQKEEKKEEKNADGIPKK--IVVGLDDSFVPMGFKNEKGEIV 58 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D RA++ + +++++ P+N + L L ID++ T R+ + Sbjct: 59 GFDIDLARAVAQKLG---AEVEFKPINWDSKILDLNGGNIDLIWNGLTITEERKKETEM- 114 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + Q ++ I++ + L+G +I Q ++ E + K + Sbjct: 115 -TKPYFTSHQLIVVKAGSSINAKADLAGKNIGSQTESSGEEAVKKSGDDKKFK-EFKTYA 172 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTND---RPSEHVILPDIISKSPLAPAIIQGD 234 + ++ A R DA D K T + + + IL D + A +G+ Sbjct: 173 QYDQAFMDLDAGRVDAIIADEVLAKYTKKTKETQAKKELYKILNDNYGEEEYGIAAKKGN 232 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 + ++ A+ + G QK ++ KD Sbjct: 233 IKLVEAIN---KAIEELKADGTYQKIYSKWFKD 262 >gi|46579379|ref|YP_010187.1| amino acid ABC transporter periplasmic amino acid-binding protein [Desulfovibrio vulgaris str. Hildenborough] gi|120603065|ref|YP_967465.1| extracellular solute-binding protein [Desulfovibrio vulgaris DP4] gi|46448793|gb|AAS95446.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Desulfovibrio vulgaris str. Hildenborough] gi|120563294|gb|ABM29038.1| amino acid ABC transporter substrate-binding protein, PAAT family [Desulfovibrio vulgaris DP4] gi|311233202|gb|ADP86056.1| extracellular solute-binding protein family 3 [Desulfovibrio vulgaris RCH1] Length = 272 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 53/254 (20%), Positives = 98/254 (38%), Gaps = 21/254 (8%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 S L +I RG L+ G + G + F NG++ GFD+D + ++ A+ ++++ Sbjct: 28 AKKSTLNEIMARGELRVGFDAGYLPFEMTDKNGNYVGFDIDIAKEMARAMG-----VKFV 82 Query: 82 PLNAKER--FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGI 137 P+N AL S + DI+ T R + + A GQ ++ KK + Sbjct: 83 PVNTDFDGMIPALLSDKFDIIISGMTVTQERNLKINFAD--PYIVVGQTVLLSKKLEGKV 140 Query: 138 SSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 S L+ ++ + GTT E K F++ + R DA+ Sbjct: 141 KSWKDLNSPEYTVVSRLGTTGEEAAKRMLPKAKFK----SFDKEADGALEVVNGRADAWV 196 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D+ + + V L + PL I +GD ++ N ++ M + G Sbjct: 197 YDMPFNVVFMAEQGK-DKVVHLDKPFTYEPLGFGIKKGDPDFLNFLN---NFMRQIKNDG 252 Query: 256 ITQKNINQVSKDTT 269 + ++ + T Sbjct: 253 RYDRIYDKWMRSTE 266 >gi|154247956|ref|YP_001418914.1| extracellular solute-binding protein [Xanthobacter autotrophicus Py2] gi|154162041|gb|ABS69257.1| extracellular solute-binding protein family 3 [Xanthobacter autotrophicus Py2] Length = 296 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 53/248 (21%), Positives = 95/248 (38%), Gaps = 8/248 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS----SAIFDDPSKIQY 80 L + + G ++ ANG G+ VD CR ++ + K+ Y Sbjct: 38 QTLDRVAGGEAFRIGYRQFAPPYSYAAANGQPSGYIVDLCREVADGVKRTLKLPAIKVDY 97 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + + A++RF A++ +IDIL + T+ R + + T+ DG G + + + + Sbjct: 98 VKVTAEDRFEAVRDGRIDILCEPSSMTMSRRALVDFSL--PTFLDGAGV-VTRGAPVKGL 154 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L G + V GTTTE TL + + + + DAY GD Sbjct: 155 EDLKGKKVGVLRGTTTEETLRSTLGQMRIAADIVTVTDHPDGLKQLADGKLDAYFGDRGI 214 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQK 259 L L + + + + A A+ +GD + +V T + E + I K Sbjct: 215 LNYLIANSPAGNRLSLSDQYFTFETYALALPRGDQAFRLVVDATLADLYRTERIRDIYAK 274 Query: 260 NINQVSKD 267 + + D Sbjct: 275 SFGKFPPD 282 >gi|110801642|ref|YP_698644.1| amino acid ABC transporter (binding protein) [Clostridium perfringens SM101] gi|110682143|gb|ABG85513.1| amino acid ABC transporter, amino acid-binding protein [Clostridium perfringens SM101] Length = 262 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 51/268 (19%), Positives = 103/268 (38%), Gaps = 13/268 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ ++ ++IL F ++ + K + G++ V NGD GFD Sbjct: 1 MKKLLFL-LIGIVILSILIFGCSSKKIETKKDSNKVIIGMDETFVPMGFKNENGDIVGFD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + + K+ + P++ + L + ID++ T RE + Sbjct: 60 VDLAKEAFKRM---NLKVIFQPIDWSMKETELTNGNIDLIWNGYTMTPEREKKVAFTNS- 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY--FKAHNMKYHPIVFER 178 + Q + I+++ L G ++ Q G+++ TL + P++F+ Sbjct: 116 -YLKNRQVIVTLSNSNINTLKDLKGKTVTTQDGSSSLDTLFENPELTKSFKNGEPVLFDS 174 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + A R DA D ND PS+ +L + + + + + + ++ Sbjct: 175 FNDCFMDLEAGRSDAVVCDEILAQYYIFKND-PSKFHVLTEDLGEESYSIGLRK-NSNLI 232 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSK 266 + ++ T M +E G K N+ Sbjct: 233 DPLNKTLEDM---KEDGTIAKISNKWFG 257 >gi|218245993|ref|YP_002371364.1| family 3 extracellular solute-binding protein [Cyanothece sp. PCC 8801] gi|257059044|ref|YP_003136932.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 8802] gi|218166471|gb|ACK65208.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 8801] gi|256589210|gb|ACV00097.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 8802] Length = 255 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 47/254 (18%), Positives = 90/254 (35%), Gaps = 13/254 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K S+L ++ ++ L +I KRG L + + NG+ +G + Sbjct: 1 MRK-ILSSLLISGLIAALISPAWSAELEEILKRGQLIVAVKDNVRPLGFSDQNGELQGLE 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D R L+ + DP + + P++ ++R + +++D+ T R + P Sbjct: 60 IDLARRLAEELLGDPQAVIFQPVSNQKRLQMVIDQEVDLAIARVSVTPSRNRLVDF--SP 117 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y DG G + K+ + V+ L+ I V ++T + F + E Sbjct: 118 YYYLDGTGL-VTKQSYLGGVAGLAKGKIAVLRVSSTIAVIRAEFPQA----ELVGVNSYE 172 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ--GDTEWY 238 E DA+ GD S L + P +S L + + Sbjct: 173 EALRLLENETVDAFAGDNSILAGWVQDYPSYRQW---PVRLSGEALGVVMPKGLQYASLR 229 Query: 239 NIVSWTHYAMVTAE 252 + V+ + Sbjct: 230 DRVNRAIVRWQKSG 243 >gi|329939958|ref|ZP_08289240.1| glutamate uptake system binding subunit [Streptomyces griseoaurantiacus M045] gi|329300784|gb|EGG44680.1| glutamate uptake system binding subunit [Streptomyces griseoaurantiacus M045] Length = 279 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 43/233 (18%), Positives = 80/233 (34%), Gaps = 11/233 (4%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 +K GI G +G + GFDVD + ++ + D I + + +R ALQ Sbjct: 40 IKVGIKFDQPGLGLKTPDGSYTGFDVDVAKYVAKELGYDEKNIDFKETPSADRENALQRG 99 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 +D + + T R+ + A Q ++ I+ + L+G +C G+T Sbjct: 100 DVDYIVASYSITDERKAKVDFA--GPYLLAHQDLLIRADDKIAKGADLNGKKLCSVTGST 157 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215 + + K K + E + DA T D S L + + Sbjct: 158 SAQNVK---KTIAPKAQLREYGTYSECMDGLTSGAVDALTTDDSILAGYASQDQYKGKVK 214 Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHY------AMVTAEELGITQKNIN 262 + +S + +GDT+ + ++ A A + N Sbjct: 215 LAGLKLSNENYGIGVKKGDTKMTDKINKALEKMASDGAWEKAVKDNFGPANYK 267 >gi|257790887|ref|YP_003181493.1| extracellular solute-binding protein family 3 [Eggerthella lenta DSM 2243] gi|325832074|ref|ZP_08165171.1| major cell-binding factor [Eggerthella sp. HGA1] gi|257474784|gb|ACV55104.1| extracellular solute-binding protein family 3 [Eggerthella lenta DSM 2243] gi|325486395|gb|EGC88847.1| major cell-binding factor [Eggerthella sp. HGA1] Length = 274 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 51/238 (21%), Positives = 80/238 (33%), Gaps = 11/238 (4%) Query: 35 FLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 L+ G + GF G+ +G +VD R L+ I P ++ +N R L Sbjct: 36 VLRVGTKIDVPGFGFQNPETGNIEGMEVDIARELAKRIKGSPDALRVTGVNVTTRGAMLD 95 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153 + +D T R+ S + Y D G ++ K GI + L G ++ V Sbjct: 96 NGTLDATLATFTITEARKKSYNFSR--PYYTDHIGVLVKKSSGIVDLKDLDGKTVGVALS 153 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 TT L + + EI A R DA++ D S L Sbjct: 154 ATTRDKLTAAGDEIGIHMSFAEYSTYPEIKIALVTGRVDAFSVDRSILNGYV-----DDS 208 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 ++L + A + +TE + V AM L Q + T P Sbjct: 209 TMLLDAQFAPQEYGVATKKSNTELADQVDAAIGAMADDGTLTALQ---ERWGLSTETP 263 >gi|152997697|ref|YP_001342532.1| extracellular solute-binding protein [Marinomonas sp. MWYL1] gi|150838621|gb|ABR72597.1| extracellular solute-binding protein family 3 [Marinomonas sp. MWYL1] Length = 268 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 57/274 (20%), Positives = 96/274 (35%), Gaps = 18/274 (6%) Query: 2 YKDFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 K F+S L L S S N S L + RG L+ G + F GD Sbjct: 1 MKKIFISALALCSATLASASDNDLWEKSTLNQVLNRGELRVCAEAGYMPFDMRDKKGDIV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD + ++ A+ K+ AL + + DI+ T R + + Sbjct: 61 GFDVDIAKTMAKAMG---VKLDIRNTAWDGIIPALLTDKCDIIISGMTITPERNLKVNFT 117 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIV 175 I K +++ L+ A +I + G T++ + Y + Sbjct: 118 DPYIVVGQTILLSPKFKGKVTNYRDLNDAKYTIATKLGATSDYAVKRYMSNA----KLNL 173 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 FE E DA+ D+ Y + + V L + + PL AI +GD Sbjct: 174 FETESEGVLEVVNGNADAFVYDLP--YNAIYSAQNEGKVVHLDESFTYEPLGFAIRKGDP 231 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 ++ N ++ A + G K + ++ Sbjct: 232 DFMNFLNNYL-AQIKG--DGTYDKIYQKWFASSS 262 >gi|91224516|ref|ZP_01259778.1| hypothetical binding protein component ofABC transporter [Vibrio alginolyticus 12G01] gi|269968273|ref|ZP_06182299.1| conserved hypothetical protein [Vibrio alginolyticus 40B] gi|91190858|gb|EAS77125.1| hypothetical binding protein component ofABC transporter [Vibrio alginolyticus 12G01] gi|269827130|gb|EEZ81438.1| conserved hypothetical protein [Vibrio alginolyticus 40B] Length = 262 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 53/272 (19%), Positives = 101/272 (37%), Gaps = 23/272 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + L L + S + NA IL DIK G LK ++G + F NG + GF Sbjct: 1 MKKLLCFAALGLAV----STTVNADPILDDIKSTGELKVCFDSGYMPFEMTAKNGQYIGF 56 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLN--AKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 D+D + ++ A+ ++++P+N L + + ++ T +R + A Sbjct: 57 DIDLGKQMARAM-----DVKFVPVNTSWDGIIPTLLTGKCHMIMGGMTITPMRNTQVNFA 111 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGAS--ICVQAGTTTELTLADYFKAHNMKYHPIV 175 + + + +SS L+ + + GTT E + Y + Sbjct: 112 DPYVVIGQSILVDLKHEGKVSSYRDLNSPEYVVATKLGTTGEQAVKRYLPKA----KINL 167 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 +E E + DA+ D Y + + + L + PL A+ QG+ Sbjct: 168 YETQSEAVLEVANGKVDAFVYDFP--YNSIYVAENKGQLMHLAKPFTYEPLGWAVPQGNP 225 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 + N ++ + G + ++ D Sbjct: 226 DTLNFLNNYLRQIKG---DGTYDRIYDKWFND 254 >gi|104773641|ref|YP_618621.1| glutamine ABC transporter, glutamine-binding protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103422722|emb|CAI97349.1| Glutamine ABC transporter, glutamine-binding protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|325125283|gb|ADY84613.1| Glutamine ABC transporter solute-binding component [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 279 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 41/248 (16%), Positives = 86/248 (34%), Gaps = 15/248 (6%) Query: 30 IKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 +K + G+ + F +GF++D R L+ I K +++ + A+ + Sbjct: 40 VKSSKTITWGVKFDMALFGIKSVKTNKLEGFEIDLARLLTKEILGKDGKAKFIEVTAQTK 99 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL--SGA 146 L++ +D + T R+ S+ + G + I S+ L G Sbjct: 100 IPQLKNNNLDAVLATMTITNERKKSVDF--STPYFKAGTSLMTKTSSPIKSIKDLNHKGR 157 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 + V GTT +A ++ H A A + DA D L + Sbjct: 158 VVIVAKGTTAADDIARLAPKATIRQH----NDYGACTNALLAGQGDAVATDNGILAGIAK 213 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 + ++ ++ P A+ +G T+ ++ A+ A+ G K + + Sbjct: 214 QHKS---LHLVGGTVAVEPYGIAVEKGQTKMLEAIN---KALKEAKADGSYHKLVKKWFG 267 Query: 267 DTTNPDVQ 274 + + Sbjct: 268 NIPGFSAK 275 >gi|307130478|ref|YP_003882494.1| amino acid ABC transporter periplasmic binding protein [Dickeya dadantii 3937] gi|306528007|gb|ADM97937.1| amino acid ABC transporter periplasmic binding protein (precursor) [Dickeya dadantii 3937] Length = 278 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 46/250 (18%), Positives = 97/250 (38%), Gaps = 14/250 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59 M ++L +L FTS A +L D+ RG LKC + + + F+ AN G Sbjct: 1 MTVKKLSAVLASSVL-FTSIGAQADLLADMTARGELKCAVYSDVPPFSSPDANTRQLVGM 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD C AL+ + K+ +P + + R + + + D+L N +T R + Sbjct: 60 DVDLCNALAKQMG---LKLTLVPTSVEARIAVIVTGRADVLIANLAYTKTRGNQIQF--S 114 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + ++ K+ ++ G I GTT+E ++ + + F+ Sbjct: 115 DPYYVAKEMLLVKKENADKTLEYFKGKRISATKGTTSEQSI------NLKGGKAVTFQDS 168 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPS-EHVILPDIISKSPLAPAIIQGDTEWY 238 A ++ + ++ + + E ++ + ++ P+ + + + Sbjct: 169 ASAFLALEQNKAVGFVTNMMTGIKMISQAKKDGIELAMIKEPMALEPIGVGMKRDEPALL 228 Query: 239 NIVSWTHYAM 248 V+ + M Sbjct: 229 AAVNTSLKTM 238 >gi|116513633|ref|YP_812539.1| amino acid ABC transporter periplasmic protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116092948|gb|ABJ58101.1| amino acid ABC transporter substrate-binding protein, PAAT family [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 279 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 41/248 (16%), Positives = 86/248 (34%), Gaps = 15/248 (6%) Query: 30 IKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 +K + G+ + F +GF++D R L+ I K +++ + A+ + Sbjct: 40 VKSSKTITWGVKFDMALFGIKSVKTNKLEGFEIDLARLLTKEILGKDGKAKFIEVTAQTK 99 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL--SGA 146 L++ +D + T R+ S+ + G + I S+ L G Sbjct: 100 IPQLKNNNLDAVLATMTITDERKKSVDF--STPYFKAGTSLMTKTSSPIKSIKDLNHKGR 157 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 + V GTT +A ++ H A A + DA D L + Sbjct: 158 VVIVAKGTTAADDIARLAPKATIRQH----NDYGACTNALLAGQGDAVATDNGILAGIAK 213 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 + ++ ++ P A+ +G T+ ++ A+ A+ G K + + Sbjct: 214 QHKS---LHLVGGTVAVEPYGIAVEKGQTKMLEAIN---KALKEAKADGSYHKLVKKWFG 267 Query: 267 DTTNPDVQ 274 + + Sbjct: 268 NIPGFSAK 275 >gi|168186417|ref|ZP_02621052.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Clostridium botulinum C str. Eklund] gi|169295555|gb|EDS77688.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Clostridium botulinum C str. Eklund] Length = 272 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 59/284 (20%), Positives = 102/284 (35%), Gaps = 29/284 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGD------------IKKRGFLKCGINTGLVGFA 48 M K +SIL ++++ + + S +KK G L G++ G Sbjct: 1 MKK--IISILLIVMMGVVALTGCGSKGASAKSSGSDSSLESVKKSGKLLVGLDDGYPPME 58 Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + GFDVD R + I K++++P L LQSK+ D + T Sbjct: 59 FRDEKNNLVGFDVDLAREIGKKIG---VKVEFIPTEFSGILLGLQSKKFDTIIAGFTMTD 115 Query: 109 LREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 R+ SL GQ + K I +S L G I Q G+ ++T + Sbjct: 116 ERKKSLNFTE--PYVLGGQIVAVKKGNTSIKKLSDLKGKIIGCQMGSAGQITAE---RKL 170 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 + ++ E + R DA D + +P + +L ++++K P+ Sbjct: 171 KDIKELRKYGKITETFSDMSIGRIDAVIMDAQV--GGYYISKKPGQFEVLDEMVAKEPMG 228 Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELGITQK-NINQVSKDTTN 270 A +GD N V ++ G K ++ D Sbjct: 229 IAFRKGDNALKNEVQKIIN---ELKKDGTLSKLSVKWFGFDAYK 269 >gi|283783251|ref|YP_003374005.1| extracellular solute-binding protein [Gardnerella vaginalis 409-05] gi|283441644|gb|ADB14110.1| bacterial extracellular solute-binding protein, family 3 [Gardnerella vaginalis 409-05] Length = 277 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 48/250 (19%), Positives = 95/250 (38%), Gaps = 11/250 (4%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 F +IL ++ A D KK ++ GI G K +G + GFDVD Sbjct: 7 RIFRAILAMLCTICCVMPLTACDRSDGKK--VIRIGIKFDQPGMGF-KKSGTYVGFDVDV 63 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 + ++ + +I + +K+R LQ+ +D++ T R+ + A + Sbjct: 64 AKYVAKKLGYSEDQIVWKESPSKQRETMLQNGDVDMIVATYSITDARKKMVSFA--GPYF 121 Query: 124 FDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 GQ ++ K + +S + L G +C +G+T+ + + + + + K + E Sbjct: 122 IAGQDLLIRKDEHKVSGPNDLDGKRLCSVSGSTSAIAIKERYSS---KVQLMQQPGYAEC 178 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A + DA T D L L + ++ + I +G+T ++ Sbjct: 179 ATALFSGIVDAVTTDDIILAGLATASR--GRLKLVNKPFTAEYYGIGIKKGNTGLAKKIN 236 Query: 243 WTHYAMVTAE 252 M+ Sbjct: 237 AALKDMIRNG 246 >gi|313123229|ref|YP_004033488.1| ABC amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312279792|gb|ADQ60511.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 279 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 40/248 (16%), Positives = 83/248 (33%), Gaps = 15/248 (6%) Query: 30 IKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 +K + G+ F +GF++D R L+ I K +++ + ++ + Sbjct: 40 VKSSKTITWGVKFDTALFGIKSVKTNKLEGFEIDLARLLTKEILGKDGKAKFIEVTSQTK 99 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL--SGA 146 L++ +D + T R+ S+ + G + I S+ L G Sbjct: 100 IPQLKNNNLDAVLATMTITDERKKSVDF--STPYFKAGTSLMTKTSSPIKSIKDLNHKGR 157 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 V GTT +A + A A + DA D L + Sbjct: 158 VAIVVKGTTAADDIARLAPKA----KIRQYNDYGACTNALLAGQGDAVATDNGILAGIAE 213 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 + ++ ++ P A+ +G T+ ++ A+ A+ G K + + Sbjct: 214 QHKS---LHLVGGTVAVEPYGIAVEKGQTKMLEAIN---KALREAKADGSYHKLVKKWFG 267 Query: 267 DTTNPDVQ 274 + V+ Sbjct: 268 NIPGFSVK 275 >gi|320322170|gb|EFW78266.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. glycinea str. B076] Length = 261 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 46/249 (18%), Positives = 88/249 (35%), Gaps = 11/249 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 + +A+ L D+ RG LK + F V + +G D+D + L+ + Sbjct: 17 MLSQTPAHANGLDDVVARGTLKVAVPQDFPPFGSVGPDMKPRGLDIDTAQLLADQL---K 73 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 K++ P+N+ R L + ++D++ + RE + + ++ Sbjct: 74 VKLELTPVNSTNRIPFLTTGKVDLVISSLGKNPDREKVIDFSRAYAPFY--LAVFGPPDS 131 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 + ++ L G +I V G ++ L+ FE AAY A + Sbjct: 132 PVKDIADLKGKTISVTRGAIEDIELSKVAPE---GATIKRFEDNNSTIAAYLAGQTGLIA 188 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL- 254 + A+ + P L + SP+ + +G E V A L Sbjct: 189 SGNVVMAAI--SERNPKRIPALKVKLKDSPVYVGVNKGQPELLGKVDEILNAAKADGALE 246 Query: 255 GITQKNINQ 263 +QK + Q Sbjct: 247 KASQKWLKQ 255 >gi|297202815|ref|ZP_06920212.1| glutamate binding protein [Streptomyces sviceus ATCC 29083] gi|297148212|gb|EFH28894.1| glutamate binding protein [Streptomyces sviceus ATCC 29083] Length = 281 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 46/221 (20%), Positives = 85/221 (38%), Gaps = 8/221 (3%) Query: 43 GLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102 G + +G + GFDVD ++ + P +I+++ + +R AL + I++ Sbjct: 49 DQPGLGLKEPDGSFSGFDVDVATYVAKQLGYKPDQIEFVETKSADRENALARGDVKIIAA 108 Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162 R+ + A Q ++ K IS + L+G +C G+T+ + D Sbjct: 109 TYSINDERKKKVDFA--GPYLLAHQDLLVKKDSKISQATDLNGEKLCSVTGSTSAQNVHD 166 Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222 F K + E A ++ DA T D S L + + + +S Sbjct: 167 DFA---PKAQLKQYGGYSECIAGLQSGAVDAVTTDDSILAGFAAQDKYKGQFKLAGLKLS 223 Query: 223 KSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 + +GDT N V+ MV+ G QK +++ Sbjct: 224 NENYGIGVKKGDTATLNKVNAALEKMVS---DGSWQKAVDK 261 >gi|237808726|ref|YP_002893166.1| extracellular solute-binding protein family 3 [Tolumonas auensis DSM 9187] gi|237500987|gb|ACQ93580.1| extracellular solute-binding protein family 3 [Tolumonas auensis DSM 9187] Length = 259 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 46/239 (19%), Positives = 90/239 (37%), Gaps = 10/239 (4%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 A L DI+++G LK + F V A+ G+D+D L+ + K++ + Sbjct: 21 AKADQLDDIQQKGVLKVAVPQDFPPFGSVGADMQPYGYDIDMAGYLAQKL---NVKLELV 77 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 P+ + R LQ+K++D++ + RE + + +F G + + + Sbjct: 78 PVTSANRIPYLQTKKVDLVISSLGKNPEREKVIDFSNAYAPFF--LGVFGAESVALKTSD 135 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 +L+ +I V G ++ L+ A FE +AY + + D + Sbjct: 136 ELADKTIGVTRGAVEDMELSKIAPAST---TVKRFEDNNTTLSAYLSGQIDLIATGNVVI 192 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 + P ++ SP I +G+T V+ A + L +N Sbjct: 193 AEIASRM--PDRKPATKFMLKNSPCFIGIYKGETRLQQKVNELITAARSDGSLNKFSEN 249 >gi|325684593|gb|EGD26752.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 279 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 40/248 (16%), Positives = 83/248 (33%), Gaps = 15/248 (6%) Query: 30 IKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 +K + G+ F +GF++D R L+ I K +++ + ++ + Sbjct: 40 VKSSKTITWGVKFDTALFGIKSVKTNKLEGFEIDLARLLTKEILGKDGKAKFIEVTSQTK 99 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL--SGA 146 L++ +D + T R+ S+ + G + I S+ L G Sbjct: 100 IPQLKNNNLDAVLATMTITDERKKSVDF--STPYFKAGTSLMTKTSSPIKSIKDLNHKGR 157 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 V GTT +A + A A + DA D L + Sbjct: 158 VAIVVKGTTAADDIARLAPKA----KIRQYNDYGACTNALLAGQGDAVATDNGILAGIAE 213 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 + ++ ++ P A+ +G T+ ++ A+ A+ G K + + Sbjct: 214 QHKS---LHLVGGTVAVEPYGIAVEKGQTKMLEAIN---KALKEAKADGSYHKLVKKWFG 267 Query: 267 DTTNPDVQ 274 + V+ Sbjct: 268 NIPGFSVK 275 >gi|182438660|ref|YP_001826379.1| putative ABC transporter solute-binding protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|178467176|dbj|BAG21696.1| putative ABC transporter solute-binding protein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 351 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 40/242 (16%), Positives = 79/242 (32%), Gaps = 15/242 (6%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFD 73 S + + IK+RG L G++ + + +GFD+D RA++ + Sbjct: 76 ASLPPSSADGPGVEKIKQRGKLIAGVDQNSFRWGYRNPEARELEGFDIDLVRAIAKDVLG 135 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 DP + + + +R AL++ ++D++ R R + + + GQ + K Sbjct: 136 DPDAVIFRAIPTNQRIAALENDRVDVVVRTMTINCKRLEQVSFSTA--YFQAGQQVLAPK 193 Query: 134 KKGISSVS-QLSGASICVQAGTTTELTL---------ADYFKAHNMKYHPIVFERVEEID 183 I+ L G +C G+T L D F + + Sbjct: 194 GSTITGYDASLKGKRVCSAEGSTAYEALEKKSFGALYKDDFDGTARDPDLLTVPNQLDCL 253 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 + DA D + P+ + + A +G + V+ Sbjct: 254 VRLQLGEVDAVVTDNALAAGQAAQ--DPAVELKGKAPFTTEYYGVATKKGADDLVARVNK 311 Query: 244 TH 245 Sbjct: 312 VL 313 >gi|317488404|ref|ZP_07946957.1| bacterial extracellular solute-binding protein, family 3 [Eggerthella sp. 1_3_56FAA] gi|316912448|gb|EFV34004.1| bacterial extracellular solute-binding protein, family 3 [Eggerthella sp. 1_3_56FAA] Length = 256 Score = 157 bits (397), Expect = 3e-36, Method: Composition-based stats. Identities = 51/238 (21%), Positives = 80/238 (33%), Gaps = 11/238 (4%) Query: 35 FLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 L+ G + GF G+ +G +VD R L+ I P ++ +N R L Sbjct: 18 VLRVGTKIDVPGFGFQNPETGNIEGMEVDIARELAKRIKGSPDALRVTGVNVTTRGAMLD 77 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153 + +D T R+ S + Y D G ++ K GI + L G ++ V Sbjct: 78 NGTLDATLATFTITEARKKSYNFSR--PYYTDHIGVLVKKSSGIVDLKDLDGKTVGVALS 135 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 TT L + + EI A R DA++ D S L Sbjct: 136 ATTRDKLTAAGDEIGIHMSFAEYSTYPEIKIALVTGRVDAFSVDRSILNGYV-----DDS 190 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 ++L + A + +TE + V AM L Q + T P Sbjct: 191 TMLLDAQFAPQEYGVATKKSNTELADQVDAAIGAMADDGTLTALQ---ERWGLSTETP 245 >gi|326333229|ref|ZP_08199476.1| glutamate-binding protein [Nocardioidaceae bacterium Broad-1] gi|325948873|gb|EGD40966.1| glutamate-binding protein [Nocardioidaceae bacterium Broad-1] Length = 272 Score = 157 bits (397), Expect = 3e-36, Method: Composition-based stats. Identities = 46/248 (18%), Positives = 89/248 (35%), Gaps = 17/248 (6%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 +K GI G +A+G + GFDVD ++ + + +I+++ + R L+ Sbjct: 36 KIKIGIKFDQPGLGFKEADGSYSGFDVDMATYIAEGLGYEGDQIEFVEAVSANRETFLKD 95 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAG 153 +D++ T R+ + A Y GQ ++ I+ L G +C G Sbjct: 96 GTVDMILATYSITDERKAEVDFA--GPYYIAGQDLLVAADNTDITGPDTLDGKKLCSVTG 153 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 +T+ + D + F+ + A + DA T D L P + Sbjct: 154 STSAQKVKDEYAK---GVQLQEFDTYSKCVTAIEGGQLDAMTTDDIILAGYAQQ--DPGK 208 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT----- 268 I+ S+ + +G + + ++ E G +K N ++ Sbjct: 209 FKIVGAPFSEENYGVGLPKGSKD-RDKINDLIEQSF---EDGAWEKAFNDNLGESGYELP 264 Query: 269 TNPDVQRF 276 P V R+ Sbjct: 265 EPPAVDRY 272 >gi|255326959|ref|ZP_05368035.1| glutamate binding protein [Rothia mucilaginosa ATCC 25296] gi|255296176|gb|EET75517.1| glutamate binding protein [Rothia mucilaginosa ATCC 25296] Length = 276 Score = 157 bits (397), Expect = 3e-36, Method: Composition-based stats. Identities = 40/219 (18%), Positives = 79/219 (36%), Gaps = 8/219 (3%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 ++ GI G N + GFDV+ R ++ + +I+++ A R L + Sbjct: 34 KIRIGIKVDQPGLGYQDGN-TYTGFDVEVARYVAGKLGYSEEQIEFVESPAANRENMLNT 92 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAG 153 Q+D++ + R+ ++ A Y GQ ++ I L+G ++C G Sbjct: 93 GQVDMIFATYSISESRKKTVDFA--GPYYTAGQDLLVRADNTDIKGPDDLNGKNLCSVTG 150 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 +T+ + D F + + + + A DA T D L L T + Sbjct: 151 STSAQKVQDKFAKN---VNLVKQNSYSDCVVALNGGVVDAVTTDDITLAGLAATKANKGK 207 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 ++ + + +G + V+ MV Sbjct: 208 LKVVGSPFTTERYGVGLPKGTDK-CEAVNNAINEMVADG 245 >gi|149201666|ref|ZP_01878640.1| polar amino acid uptake family ABC transporter, periplasmic substrate-binding protein [Roseovarius sp. TM1035] gi|149144714|gb|EDM32743.1| polar amino acid uptake family ABC transporter, periplasmic substrate-binding protein [Roseovarius sp. TM1035] Length = 269 Score = 157 bits (397), Expect = 3e-36, Method: Composition-based stats. Identities = 40/230 (17%), Positives = 92/230 (40%), Gaps = 9/230 (3%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + + + L ++ TS + A L DIK G + G+ + + ++G+ +G ++ Sbjct: 1 MRTYIKAALTAVVATLTSTAAMADALQDIKDAGKIVVGVKQDYKPWGYLTSDGELQGLEI 60 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D + ++ + + ++ +P+ A R LQ +I+++ R +G+ P Sbjct: 61 DLAKDVAERLGVE---VELVPVVASNRMEFLQQGRINLIIATMGDNEQRRQVIGM-IEPN 116 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y G + K G+ + L GA +C G+ + + + + F + E Sbjct: 117 YYAGGTNVLAPKAAGLKNWEDLKGADVCALQGSYYNKRVTQLY-----GPNLVAFAGIPE 171 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 AA C A+ D + + + ++ + +E + + A+ Sbjct: 172 ATAALLNGSCIAFLYDNTWIESQLASDAQWAEFEMPFPTEDPQAWSIAVP 221 >gi|331007213|ref|ZP_08330422.1| Hypothetical Protein IMCC1989_1214 [gamma proteobacterium IMCC1989] gi|330418980|gb|EGG93437.1| Hypothetical Protein IMCC1989_1214 [gamma proteobacterium IMCC1989] Length = 532 Score = 156 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 55/233 (23%), Positives = 94/233 (40%), Gaps = 12/233 (5%) Query: 6 FVSILCLIILFFTSFSTNASI--LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 F +L L FFT+ + L IK RG + G+ +A A+G+ G +VD Sbjct: 5 FSHLLILFSFFFTNALAASDSPRLDLIKSRGAVIVGVKNDYPPWAYYDASGNLVGLEVDL 64 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 + ++ + ++ + + R L+ IDI+ T R G+ P Y Sbjct: 65 AQDIADRLGVS---LKLQAVTSSNRISQLEQGSIDIIIATMGDTAKRRQQTGI-IEPSYY 120 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 G ++HKK + S ++L G S+C+ T L + F P +E + Sbjct: 121 SSGATILIHKKSPLKSWAELYGKSVCLTKNTYLNRDLIERF-----LLKPQKYEGTLDNM 175 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 AA + +C + D +AL L L R + D I P A+ + + + Sbjct: 176 AALQFGKCSGWIYDDTALTRL-LQEPRWQDFKAPLDSIMLIPWTLAVKKSEKD 227 >gi|315925538|ref|ZP_07921748.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Pseudoramibacter alactolyticus ATCC 23263] gi|315621079|gb|EFV01050.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Pseudoramibacter alactolyticus ATCC 23263] Length = 272 Score = 156 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 48/287 (16%), Positives = 100/287 (34%), Gaps = 30/287 (10%) Query: 1 MYKDFFVSILCLIILFF----TSFSTNASILGDIK-KRGFLKCGINTGLVGFAEVKANGD 55 M K + +++ I S ++K G++ Sbjct: 1 MKKKWLAALMTAAIAVAALAGCGASNKQDSKAEVKNDSKTFVIGVDDTFPPMGFRNKKNQ 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFD+D R + + K + +N + + L++ +ID + T R+ ++ Sbjct: 61 IVGFDIDMAREAAKRM---NLKFKVQAINWDTKEMELKNDKIDAIWNGLSITDERKKAMD 117 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL-ADYFKAHNMKYHPI 174 + Q ++ K GI + + L+G ++ Q G++ E L D Sbjct: 118 F--TKPYLENDQVIVVKKDSGIKTKADLAGKTVGCQKGSSAEDALMDDAVGKKIKGGQAT 175 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 F+ A R DA D + A S+ +L + +S A+ +G+ Sbjct: 176 EFDENVSAFEDLNAGRIDAMVVDS--VVARYYIAKHKSDFKVLGESLSPEQYGVAVKKGN 233 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV-QRFLGID 280 T+ + + Q+ ++ + KD T + +++ G D Sbjct: 234 TQMCDAI----------------QRALDDMKKDGTAAKISKKWFGQD 264 >gi|119963084|ref|YP_948498.1| glutamate-binding protein precursor [Arthrobacter aurescens TC1] gi|119949943|gb|ABM08854.1| Glutamate-binding protein precursor [Arthrobacter aurescens TC1] Length = 291 Score = 156 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 44/265 (16%), Positives = 97/265 (36%), Gaps = 13/265 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 ++ + + + K +K G F + +G GFDV+ +A+++ + Sbjct: 36 VASASFEAGTTMEKLNKAQTIKIGTKFDQPLFGQKGLDGKPVGFDVEMGKAIAAKLGIPA 95 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 KI+++ ++ R ++ ++D++ R+ + A Y GQ +++K Sbjct: 96 DKIEWVETVSQNRESFIEQGRVDLVIATYTINDARKEKVAFA--GPYYEAGQALLVNKDD 153 Query: 136 -GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I+ +SG +C G+T T+A+ + A + R + A Sbjct: 154 TSITKPEDVSGKKVCSVTGSTPAKTIAEKYGA-----EVVPAATYTACLEPLRNKQVVAV 208 Query: 195 TGDISALYALKLTNDRPSEHVIL-PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 T D L + P + + +K P + + DT + N ++ + Sbjct: 209 TTDNVILAGY--VDKEPDAFKLASDETFTKEPYGIGLKKDDTVFRNWINDQLEGFAKDDT 266 Query: 254 LGIT-QKNINQVSKDTTN-PDVQRF 276 + +V K P + R+ Sbjct: 267 YKKAWEATAGKVIKTAPELPAINRY 291 >gi|300741910|ref|ZP_07071931.1| glutamate-binding protein [Rothia dentocariosa M567] gi|311111806|ref|YP_003983028.1| amino acid ABC transporter binding protein [Rothia dentocariosa ATCC 17931] gi|300381095|gb|EFJ77657.1| glutamate-binding protein [Rothia dentocariosa M567] gi|310943300|gb|ADP39594.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Rothia dentocariosa ATCC 17931] Length = 282 Score = 156 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 46/264 (17%), Positives = 88/264 (33%), Gaps = 25/264 (9%) Query: 1 MYKDFFVSILCLII-----------LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE 49 M K FF T S+ + I + GI G Sbjct: 1 MKKSFFNRAATKFFAASTAAALALGFTLTGCSSASDSKPKI------RIGIKYDQPGLGY 54 Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 D+ GFDVD R ++ + +I+++ + R L + Q+D++ + Sbjct: 55 QDGQ-DYTGFDVDVARYIAGKLGYSEDQIEFVESPSANRENMLSNGQVDMILATYSISDS 113 Query: 110 REISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168 R+ S+ A Y GQ ++ I+ L+G ++C G+T+ + D + + Sbjct: 114 RKKSVDFA--GPYYVAGQDLLVRADETSITGPDSLNGKNLCSVTGSTSAKKIQDTYAKN- 170 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 + + + A DA T D L L T + ++ + Sbjct: 171 --VNLVKQNSYSDCVVALNGGVVDAVTTDDIILAGLAATKANKGKLKLVGKTFTTEKYGV 228 Query: 229 AIIQGDTEWYNIVSWTHYAMVTAE 252 + +G + ++ MV Sbjct: 229 GLPKGTDK-CEAINKAINEMVEDG 251 >gi|254173137|ref|ZP_04879810.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Thermococcus sp. AM4] gi|214032546|gb|EEB73375.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Thermococcus sp. AM4] Length = 253 Score = 156 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 40/245 (16%), Positives = 89/245 (36%), Gaps = 14/245 (5%) Query: 12 LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSA 70 L++L + ++ +G K L G + F G+ GFD+D + ++ Sbjct: 9 LLVLMLAAAVASSGCIGGGSKEKVLIVGTSADFPPFEYKDPQTGNITGFDIDLIKMVAKK 68 Query: 71 IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130 D K++ ++ ALQ+ ++D++ T R+ + + + Q + Sbjct: 69 AGYD--KVEIKDMDFDSLIPALQTGKVDVVIAGMTITEKRKQVVDFSI--PYWKADQAVV 124 Query: 131 MHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 + K I+S+ L G I V+ GTT + + D+ + + A Sbjct: 125 VRKDSDIAINSLDDLKGKVIGVEKGTTGAIYIKDHL---GDQVTLKEYNSYVAALQALLN 181 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 + D D + ++ I + A+ +G+ E + ++ + Sbjct: 182 GQVDVLVIDSPV----ANMFTNKYDVKVVYTINTNEHYGIAVKKGNKELLDKINKALQDI 237 Query: 249 VTAEE 253 + + E Sbjct: 238 MNSPE 242 >gi|168181319|ref|ZP_02615983.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum Bf] gi|182675354|gb|EDT87315.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum Bf] Length = 267 Score = 156 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 44/265 (16%), Positives = 94/265 (35%), Gaps = 12/265 (4%) Query: 2 YKDFFVSILCLIILFFTSF----STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 K+ SIL + ++F + S + L DIK +G G++ G Sbjct: 3 KKNILFSILIMGLIFILTGCDNKSKEDTSLKDIKAKGEFVVGLDDSFPPMGFKNDKGKIV 62 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D + ++ + K+ + P+ L+L +K ID++ T R+ + Sbjct: 63 GFDIDLAKEVAKKMG---VKVVFKPVQWDGVVLSLNNKDIDVIWNGLTITEKRKEQINF- 118 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + Q +++ I S L+ ++ +Q G+++E+ L + Sbjct: 119 -SKPYVENKQIIVVNNDSNIKSKKDLNKKTVAIQLGSSSEVALDSDKDFVKSLKELKKYS 177 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E +A R D + + + +P+ +L + + D + Sbjct: 178 NNTEALMDLQAKRVD--AVVVDEVVGRYYISKKPNVFKVLDEDFGGESYGIGFRKTDNSF 235 Query: 238 YNIVSWTHYAMVTAE-ELGITQKNI 261 V ++ I++K Sbjct: 236 REAVDKALDEVIKDGTADKISEKWF 260 >gi|256829597|ref|YP_003158325.1| extracellular solute-binding protein family 3 [Desulfomicrobium baculatum DSM 4028] gi|256578773|gb|ACU89909.1| extracellular solute-binding protein family 3 [Desulfomicrobium baculatum DSM 4028] Length = 273 Score = 156 bits (396), Expect = 4e-36, Method: Composition-based stats. Identities = 52/252 (20%), Positives = 93/252 (36%), Gaps = 17/252 (6%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 S L +I KRG L+ G++ G + F G+ GFDVD + ++ A+ K+ + Sbjct: 29 AQKSTLNEILKRGELRVGLDAGYMPFEMTDKKGEIVGFDVDMAKEMAKAMG---VKLTIV 85 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISS 139 + AL + + DI+ R + + A GQ +++KK I+S Sbjct: 86 NTDYDGIIPALMADKFDIIISGMTVNQERNLQINFAD--PYIVVGQAILLNKKHEGAITS 143 Query: 140 VSQLSGASICVQA--GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 L+ V + GTT E K FE+ + + DA+ D Sbjct: 144 YKDLNDPKFTVVSRIGTTGEQAAKRMIPKAQYK----SFEKESDGAMEVVNGQADAFVYD 199 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 + V+L + PL + +GD ++ +W + + G Sbjct: 200 LPFNVVFMAQQGG-KNLVLLDKPFTYEPLGFGVKKGDPDFL---NWLDNFLTQIKNDGRF 255 Query: 258 QKNINQVSKDTT 269 + ++ K T Sbjct: 256 DRIYDKWIKGTE 267 >gi|168177792|ref|ZP_02612456.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum NCTC 2916] gi|226947682|ref|YP_002802773.1| polar amino acid uptake ABC transporter amino acid-binding protein [Clostridium botulinum A2 str. Kyoto] gi|182670634|gb|EDT82608.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum NCTC 2916] gi|226841993|gb|ACO84659.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum A2 str. Kyoto] Length = 267 Score = 156 bits (396), Expect = 4e-36, Method: Composition-based stats. Identities = 44/265 (16%), Positives = 95/265 (35%), Gaps = 12/265 (4%) Query: 2 YKDFFVSILCLIILFFTSF----STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 K+ SIL + ++F + S + L DIK +G G++ G+ Sbjct: 3 KKNILFSILIMGLIFMLTGCDNKSKEDTSLKDIKAKGEFVVGLDDSFPPMGFKNDKGEIV 62 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D + ++ + K+ + P+ L+L +K ID++ T R+ + Sbjct: 63 GFDIDLAKEVAKKMG---VKVVFKPVQWDGVVLSLNNKDIDVIWNGLTITEKRKEQINF- 118 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + Q +++ I S L+ ++ +Q G+++E+ L + Sbjct: 119 -SKPYVENKQIIVVNNDSNIKSKKDLNKKTVAIQLGSSSEVALDSDKDFVKSLKELKKYS 177 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E +A R D + + + +P+ +L + + D + Sbjct: 178 NNTEALMDLQAKRVD--AVVVDEVVGRYYISKKPNVFKVLDEDFGGESYGIGFRKTDNSF 235 Query: 238 YNIVSWTHYAMVTAE-ELGITQKNI 261 V ++ I++K Sbjct: 236 REAVDKALDEVIKDGTADKISEKWF 260 >gi|237786244|ref|YP_002906949.1| putative extracellular solute-binding protein [Corynebacterium kroppenstedtii DSM 44385] gi|237759156|gb|ACR18406.1| putative extracellular solute-binding protein [Corynebacterium kroppenstedtii DSM 44385] Length = 370 Score = 156 bits (396), Expect = 4e-36, Method: Composition-based stats. Identities = 53/249 (21%), Positives = 94/249 (37%), Gaps = 12/249 (4%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 ST + DI +RG + G+++ L ++G+ +GFDV R ++ IF DP +I Sbjct: 111 STPEERIPDIVRRGRIIVGVSSSLNFLGFQDPSSGNLEGFDVSLAREIARDIFGDPERID 170 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 + L++ ER ALQ +DI+ R T+ RE +AF + I S Sbjct: 171 FRFLSSAERVDALQHGNVDIVVR--TMTIDRERRAKVAFSAPYLHAQARILASTSSSIQS 228 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L A++CV +T + ++ + A + H+ A D S Sbjct: 229 ADDLRDATVCVPKDSTFQHNAQVIAP----HSRFLITNDWSDCLVAMQQHQVQAIISDDS 284 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT--EWYNIVSWTHYAMVTAEELGIT 257 L L + ++ S A I + +V + ++ G Sbjct: 285 ILSGLAAQDSN---THLVGQPYGSSDYAVGIAKTTPGKNTDGLVRQVNSTLMRIRSDGTW 341 Query: 258 QKNINQVSK 266 Q+ ++ Sbjct: 342 QRLYDKWLG 350 >gi|300811418|ref|ZP_07091914.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497653|gb|EFK32679.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 279 Score = 156 bits (395), Expect = 4e-36, Method: Composition-based stats. Identities = 42/248 (16%), Positives = 84/248 (33%), Gaps = 15/248 (6%) Query: 30 IKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 +K + G+ F +GF++D R L+ I K +++ + A+ + Sbjct: 40 VKSSKTITWGVKFDTALFGIKSVKTNKLEGFEIDLARLLTKEILGKDGKAKFIEVTAQTK 99 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL--SGA 146 L++ +D + T R+ S+ + G + I S+ L G Sbjct: 100 IPQLKNNNLDAVLATMTITDERKKSVDF--STPYFKAGTSLMTKTSSPIKSIKDLNHKGR 157 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 V GTT +A + A A + DA D L + Sbjct: 158 VAIVVKGTTAADDIARLAPKA----KIRQYNDYGACTNALLAGQGDAVATDNGILAGIA- 212 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 D+ ++ ++ P A+ +G T+ ++ A+ A+ G K + + Sbjct: 213 --DQQKSLHLVGGTVAVEPYGIAVEKGQTKMLEAIN---KALKEAKADGSYHKLVKKWFG 267 Query: 267 DTTNPDVQ 274 + V+ Sbjct: 268 NIPGFSVK 275 >gi|319794875|ref|YP_004156515.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] gi|315597338|gb|ADU38404.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] Length = 266 Score = 156 bits (395), Expect = 4e-36, Method: Composition-based stats. Identities = 45/258 (17%), Positives = 93/258 (36%), Gaps = 10/258 (3%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + ++ + +L + + L ++ K +K + T + V N +G DV Sbjct: 7 KRHLALAFASVALLATAGGAHAQNALDNVLKAKTIKIAVPTDYPPYGSVDKNMKPQGLDV 66 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + +++ + KI+ +P+ + R LQ+++ D++ RE + + Sbjct: 67 EMAELIATKLG---VKIELVPVTSANRIPYLQTRKADLVISTLGKNPEREKVIEFSSAYA 123 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 +F Q K +++ S ++G ++ V G + L A+ FE Sbjct: 124 PFF--QAVYAAKSMKLTAFSDMAGKTVAVTRGAMEDQELNKVAPAN---VDYRRFEDNNA 178 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 AA+ A + SA A + P ++ SP + +G+T V Sbjct: 179 TIAAFVAGQTQTLAT--SAAVAGDMLAKNPKVSAEFKLLLKDSPCFVGVAKGETALKTKV 236 Query: 242 SWTHYAMVTAEELGITQK 259 + A L K Sbjct: 237 NEIIAAAKKDGTLDAMSK 254 >gi|237793772|ref|YP_002861324.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum Ba4 str. 657] gi|229262805|gb|ACQ53838.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum Ba4 str. 657] Length = 267 Score = 156 bits (395), Expect = 4e-36, Method: Composition-based stats. Identities = 44/265 (16%), Positives = 95/265 (35%), Gaps = 12/265 (4%) Query: 2 YKDFFVSILCLIILFFTSF----STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 K+ SIL + ++F + S + L DIK +G G++ G+ Sbjct: 3 KKNILFSILIMGLIFILTGCDNKSKEDTSLKDIKAKGEFVVGLDDSFPPMGFKNDKGEIV 62 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D + ++ + K+ + P+ L+L +K ID++ T R+ + Sbjct: 63 GFDIDLAKEVAKKMG---VKVVFKPVQWDGVVLSLNNKDIDVIWNGLTITEKRKEQINF- 118 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + Q +++ I S L+ ++ +Q G+++E+ L + Sbjct: 119 -SKPYVENKQIIVVNNDSNIKSKKDLNKKTVAIQLGSSSEVALDSDKDFVKSLKELKKYS 177 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E +A R D + + + +P+ +L + + D + Sbjct: 178 NNTEALMDLQAKRVD--AVVVDEVVGRYYISKKPNVFKVLDEDFGGESYGIGFRKTDNSF 235 Query: 238 YNIVSWTHYAMVTAE-ELGITQKNI 261 V ++ I++K Sbjct: 236 REAVDKALDEVIKDGTADKISEKWF 260 >gi|294083879|ref|YP_003550636.1| putative ABC transporter periplasmic amino acid-binding protein [Candidatus Puniceispirillum marinum IMCC1322] gi|292663451|gb|ADE38552.1| putative ABC transporter periplasmic amino acid-binding protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 275 Score = 156 bits (395), Expect = 4e-36, Method: Composition-based stats. Identities = 50/242 (20%), Positives = 95/242 (39%), Gaps = 11/242 (4%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K + L L + T A L D+ G ++CG+ AN + GFDV+ Sbjct: 9 KMAVCASLALSLALTTGTVAQADKLDDVIDNGKVRCGVVLDFPPIGYRDANNEPAGFDVE 68 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 +C+ L++A+ D + +PL ER ++ S + D++ T TL R ++G Sbjct: 69 YCKDLATAMDVD---YEIIPLTWAERLPSIVSNRADVVFGGTSDTLERAKTVGFTIPYAI 125 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y+ ++ K+ GI+S + + G + GT E+ K + F+ E+ Sbjct: 126 YYA--QAVVTKESGITSFADMKGKRVGAAVGTVPEIEFLKIAKEWGTENLYQGFQSENEV 183 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD--IISKSPLAPAIIQGDTEWYNI 240 A + DA +A+ + ++ + + + D W N Sbjct: 184 FLAVAQGKIDAGITTNTAV----KPITNQYDTIVAGPRMPWTTDYTSVVGPRKDFGWLNY 239 Query: 241 VS 242 ++ Sbjct: 240 LN 241 >gi|294787061|ref|ZP_06752315.1| glutamate-binding protein [Parascardovia denticolens F0305] gi|315226711|ref|ZP_07868499.1| glutamate ABC superfamily ATP binding cassette transporter, binding protein [Parascardovia denticolens DSM 10105] gi|294485894|gb|EFG33528.1| glutamate-binding protein [Parascardovia denticolens F0305] gi|315120843|gb|EFT83975.1| glutamate ABC superfamily ATP binding cassette transporter, binding protein [Parascardovia denticolens DSM 10105] Length = 286 Score = 156 bits (395), Expect = 4e-36, Method: Composition-based stats. Identities = 51/273 (18%), Positives = 91/273 (33%), Gaps = 11/273 (4%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 I LI+ T+ +A K + GI G K NG + GFDVD Sbjct: 14 RLLWKICSLILALTTAVGLSACGAVRGKSDHVITIGIKFDQPGLGY-KKNGTYSGFDVDV 72 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 R +++ + +I ++ +K+R LQ+ +D++ T R+ ++ A Sbjct: 73 ARYIANKLGYKDYEINWVEAPSKQRETMLQNGDVDMILATYSITDDRKKTVDFA--GPYL 130 Query: 124 FDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 GQ ++ K I L G +C G+T+ + + K + E Sbjct: 131 VAGQDLLVRKDNTNIHGPQDLDGKRLCSVTGSTSATVIKQKYSN---KVQLMEQPSYAEC 187 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A + DA T D L L ++ ++ I + Sbjct: 188 ATALFSGIVDAVTTDDIILAGLSANAR--GRLKLVGRPFTQEYYGVGIQKNAKS-KAFAH 244 Query: 243 WTHYAMVTAEELGITQKNI-NQVSKDTTNPDVQ 274 + A+ G Q+ + PD + Sbjct: 245 KINAAINEMVATGAWQRALSKDTDGSGYRPDAR 277 >gi|218440217|ref|YP_002378546.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7424] gi|218172945|gb|ACK71678.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7424] Length = 295 Score = 156 bits (395), Expect = 4e-36, Method: Composition-based stats. Identities = 48/285 (16%), Positives = 112/285 (39%), Gaps = 17/285 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L S ++L + + G L G T +V A V + G+ Sbjct: 1 MKKLTLALLSLAFTLALPLKSGAETVLERVARTGVLTVGTPTDIVPLAYVNEQQELVGYS 60 Query: 61 VDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 VDF L I +Q++ + + L S+++DI+ N ++ R+ + + Sbjct: 61 VDFLNLLKDQIQTQLGREIALQFVEITPSDGIPKLMSEEVDIIC-NAGFSWERDKFVDFS 119 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 G ++ + + S+ L G + T E + + + E Sbjct: 120 LS--MGISGTQILVKQNTNLGSIDSLKGKRVAAIPKTIAEQVI----RVSQPDATVVTVE 173 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDTE 236 +++ A + DA+ D L + T +P+ + ++P+ ++ +A + + +++ Sbjct: 174 SMQQGFEAVEQGKVDAFAADGIILEGYQQTVSQPNAYKVVPEQPYNRQGIACMVPENNSK 233 Query: 237 WYNIVSWTHYAMVT---AEE---LGITQKNINQVSKDTTNPDVQR 275 + + +++T ++ A+E + I ++ T P++ R Sbjct: 234 FLDTINFTIVRLMQGYLAQEPSSVEIIERWFGSQGIITVEPELIR 278 >gi|291302343|ref|YP_003513621.1| extracellular solute-binding protein family 3 [Stackebrandtia nassauensis DSM 44728] gi|290571563|gb|ADD44528.1| extracellular solute-binding protein family 3 [Stackebrandtia nassauensis DSM 44728] Length = 315 Score = 156 bits (395), Expect = 4e-36, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 85/248 (34%), Gaps = 14/248 (5%) Query: 29 DIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSK---IQYLPLN 84 DI G L G A G +GFD + R ++ IF ++ + ++ Sbjct: 68 DILDSGRLTIGSKFDQPLTGLRDKATGRIEGFDAEIGRIITQRIFGKVAEGENLDFIETV 127 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 R L+ +D++ T R+ ++ A Y GQ + K +GI + LS Sbjct: 128 PANREKYLEDGTVDLVLATYTITPERKKAVTFA--GPYYEAGQAIMTRKGEGIEDIKDLS 185 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 +C GTT+ + + N+ A DA + D LY Sbjct: 186 KKKVCAAEGTTSLDNVEKHNPRANVS---KPMRNWSSCRQALLEKEYDAVSTDDVILYGF 242 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 ++ PS+ I + P + +G TE ++ T + G Q + Sbjct: 243 --LSEDPSKLEISKKTFTTEPYGIGLPKGSTELQKFINETLELAF---DNGDWQTAFDST 297 Query: 265 SKDTTNPD 272 PD Sbjct: 298 LAVAEVPD 305 >gi|255528450|ref|ZP_05395244.1| extracellular solute-binding protein family 3 [Clostridium carboxidivorans P7] gi|255507856|gb|EET84302.1| extracellular solute-binding protein family 3 [Clostridium carboxidivorans P7] Length = 270 Score = 156 bits (395), Expect = 4e-36, Method: Composition-based stats. Identities = 51/279 (18%), Positives = 94/279 (33%), Gaps = 29/279 (10%) Query: 1 MYK--DFFVSILCLIILFFTSFSTNASI---------LGDIKKRGFLKCGINTGLVGFAE 49 M K ++ + + LF +N+ L +K G LK G++ Sbjct: 3 MKKISALVLTAVMAMSLFAGCGKSNSGTSTNQKTDNSLQKVKDAGVLKIGLDDSYPPMEF 62 Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK--ERFLALQSKQIDILSRNTDWT 107 + GFD+D + L+ + ++Y P+ LAL+S + D + T Sbjct: 63 RDEKNELAGFDIDMGKELAKKLG-----VKYEPVTTDFNGIVLALKSGKFDAIIAAMSIT 117 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 R+ + GQ I+ I + L G ++ Q G+T E A Sbjct: 118 DERKKEIDF--VGPYIDGGQIIIVKNSSAIQGKADLKGKTLAAQLGSTGEQAANKIEGAK 175 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 +++V E R DA D T + IL + ++K P Sbjct: 176 ----EVKKYDKVTEAFHDLSIGRVDALIVDGQV--GGYYTKKEAGTYKILTEKLTKEPEG 229 Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 + + + E + + A+ ++ G K + Sbjct: 230 IGVKKENKELKDALQ---KALDELKKDGTLSKLSMKWFG 265 >gi|226306244|ref|YP_002766204.1| glutamate ABC transporter glutamate-binding protein [Rhodococcus erythropolis PR4] gi|226185361|dbj|BAH33465.1| glutamate ABC transporter glutamate-binding protein [Rhodococcus erythropolis PR4] Length = 278 Score = 156 bits (395), Expect = 4e-36, Method: Composition-based stats. Identities = 46/278 (16%), Positives = 92/278 (33%), Gaps = 12/278 (4%) Query: 4 DFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 F + I+ + + + + G L GI G + +G + GFDV+ Sbjct: 8 RFGIGIMAIAFAATACGGGEENKSITESASDGTLTVGIKFDQPGLGQRNPDGTFSGFDVE 67 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 R +++ + P I + + +R +Q+ ++D + T R+ + Sbjct: 68 VARYIANELGVKPEGITFKESPSAQRETLIQNGEVDYIVATYSITDTRKEKVSF--GGPY 125 Query: 123 YFDGQGFIMHKK-KGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + GQ ++ I+ L G +C +G+T + D + + Sbjct: 126 FIAGQSLLVRSDNTDITGPDSLTGGKKLCSVSGSTPAQNIQDNYAK---DVQLQPLDTYS 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A R DA T D L P E ++ + + + + D+E Sbjct: 183 ACVEALRNGAVDAVTTDDIILAGYAAQ--YPGELKVVGEPFTTEKYGVGLAKDDSEGRGK 240 Query: 241 VSWTHYAMVT--AEELGITQKNINQVSKDTTNPDVQRF 276 ++ M++ A E P V R+ Sbjct: 241 INDAIEKMISTGAWEEAFNNTVGASGYPIPAPPTVDRY 278 >gi|300780393|ref|ZP_07090249.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Corynebacterium genitalium ATCC 33030] gi|300534503|gb|EFK55562.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Corynebacterium genitalium ATCC 33030] Length = 339 Score = 156 bits (395), Expect = 4e-36, Method: Composition-based stats. Identities = 48/218 (22%), Positives = 87/218 (39%), Gaps = 10/218 (4%) Query: 29 DIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 DI KRG L G++ + A G+ +GF+VD R ++ IF DP K+ + + + Sbjct: 81 DIVKRGRLIVGVDQSQYLLSFRDNATGELRGFEVDLAREIARDIFGDPDKVDFRFVESTM 140 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 R ALQS Q+D++ R T RE + + F ++ GI SV + Sbjct: 141 RTEALQSGQVDVVIRTMSIT--RERAEKVDFSVPYLDSSVRMLVPAASGIESVEDVGDER 198 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 +CV G+ + D ++ + + + A + + GD + L Sbjct: 199 VCVADGS----NVVDMARSTFPEQEVLRTRTWTDCLMAMQQFQAGFILGDETILAGAAAQ 254 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + + + +++ A I +G V+ T Sbjct: 255 DP---LTTVTGEAVAEQQYAIGIPKGYDGLTRQVNSTL 289 >gi|167589672|ref|ZP_02382060.1| extracellular solute-binding protein, family 3 [Burkholderia ubonensis Bu] Length = 246 Score = 156 bits (395), Expect = 4e-36, Method: Composition-based stats. Identities = 41/233 (17%), Positives = 82/233 (35%), Gaps = 11/233 (4%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L I K G L+ + F V + +G+D+D L+ A+ K++ +P+N+ Sbjct: 14 LDTIAKNGALRVAVPEDYPPFGSVGTDMQPQGYDIDMAGVLAKALG---VKLKLVPVNSA 70 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 R L + ++D++ + T RE + + YF QG +S+ L+G Sbjct: 71 NRIPYLTTNKVDMVISSLGKTPEREKVIDFSTAYAPYF--QGVFGPADVKVSAPDDLTGK 128 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 ++ G E+ L+ +K F+ A+ + + A+ Sbjct: 129 TVGATRGALEEIALSQLAPNATIK----RFDDNNATIQAFLSGQVQLIAAGNIVAAAILA 184 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 P + +I SP + + + + LG + Sbjct: 185 --KNPPRRPEVKFVIKNSPCFVGVNKNEPRLLAKIDDAIAHAKQDGTLGAMSR 235 >gi|11497847|ref|NP_069069.1| glutamine ABC transporter, periplasmic glutamine-binding protein (glnH) [Archaeoglobus fulgidus DSM 4304] gi|2650410|gb|AAB91001.1| glutamine ABC transporter, periplasmic glutamine-binding protein (glnH) [Archaeoglobus fulgidus DSM 4304] Length = 264 Score = 156 bits (395), Expect = 4e-36, Method: Composition-based stats. Identities = 40/237 (16%), Positives = 78/237 (32%), Gaps = 13/237 (5%) Query: 34 GFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92 G+L G + F G++ GFD+D + ++ + + +++ L Sbjct: 38 GYLTVGSDIAYPPFEFTDEKTGEYAGFDIDLMKEIAKRMG---LEAKFVNTAWDGIIPGL 94 Query: 93 QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQ 151 + + D++ T R + + Q I I V L+G + VQ Sbjct: 95 LAHKYDVICSAMTITEERAKQVDF--SDPYFEAKQVIITRADETDIQDVEDLNGKVVAVQ 152 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 GTT + ++ FE E A + DA D A + P Sbjct: 153 QGTTGDFAAQRLKDEKGIQLEIKRFEGTPEALMAVQKGDADAAIIDN--FVAYIAAKENP 210 Query: 212 SEHVILP-DIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 + I+ D + A+ + + ++ + +E G K N+ + Sbjct: 211 GLYRIVESDEFAPEYYGIAVNKDNPALLEKINEVLKEI---KEDGTYDKIYNKWFGE 264 >gi|167628828|ref|YP_001679327.1| glutamine abc transporter, glutamine-binding protein [Heliobacterium modesticaldum Ice1] gi|167591568|gb|ABZ83316.1| glutamine abc transporter, glutamine-binding protein [Heliobacterium modesticaldum Ice1] Length = 267 Score = 156 bits (395), Expect = 5e-36, Method: Composition-based stats. Identities = 41/270 (15%), Positives = 83/270 (30%), Gaps = 16/270 (5%) Query: 1 MYKDF---FVSILCLIILFFTSF------STNASILGDIKKRGFLKCGINTGLVGFAEVK 51 M K + +L L +L + + A + +K + F Sbjct: 1 MKKWVKTGLMGMLALGMLITAAGCGGGEKAAQAPTGDKSSAKKTIKVATDAAYAPFEWKD 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G+ GFD+D +A+ + D I+ + AL +K +D+L T R+ Sbjct: 61 EKGEIVGFDIDLIKAVGKELNAD---IELIDTPFDGIIAALTNKNVDMLISAMTITEKRK 117 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 S+ + Q + + + + G + VQ TT + + + K Sbjct: 118 ESIDF--SKPYFVAVQAIAVKEGSPVKKFDDIKGLKVGVQNSTTGQYVVEKLLGEKSDKI 175 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 ++ D D + N +I K A+ Sbjct: 176 --FRYDTTPMAMNMLSNGDVDVVVADKPVVQHFLKNNPNAKMTLIDDASFEKEEYGIAVR 233 Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 +G+TE V+ + + ++ + Sbjct: 234 KGETELLKQVNDALDKLEKSGKIKEISEKY 263 >gi|325062212|gb|ADY65902.1| amino acid ABC transporter, substrate binding protein [Agrobacterium sp. H13-3] Length = 268 Score = 156 bits (395), Expect = 5e-36, Method: Composition-based stats. Identities = 48/242 (19%), Positives = 85/242 (35%), Gaps = 8/242 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V+ L T A L DI G L+C + + GFD Sbjct: 1 MKKSVIVAGLLAATFAIT--PAKADKLDDIISSGTLRCAVVLDFPPMGARDDANNPIGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+C L+ A+ + + ER AL S ++D+ +T TL R ++G+ Sbjct: 59 VDYCNDLAKALGVTA---EIVETPFPERIPALMSGRVDVGVASTSDTLERAKTVGM--TV 113 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + + K G+ S + G ++ AGT + L K + ++ Sbjct: 114 PYFAFEMAVTANDKSGVKSFEDMKGKTVGATAGTFEAIALEKTVKEWGVG-EFRPYQTQA 172 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 ++ A + DA + A T V+ +A + + + N Sbjct: 173 DVFLALSQGQIDATVSTSTVAQANVKTGKFAGISVVGKAPYDIDYVALFTNRDEYGFINY 232 Query: 241 VS 242 ++ Sbjct: 233 LN 234 >gi|119898554|ref|YP_933767.1| putative amino acid-binding protein [Azoarcus sp. BH72] gi|119670967|emb|CAL94880.1| putative amino acid-binding protein [Azoarcus sp. BH72] Length = 272 Score = 156 bits (395), Expect = 5e-36, Method: Composition-based stats. Identities = 47/267 (17%), Positives = 98/267 (36%), Gaps = 16/267 (5%) Query: 2 YKDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 + F S+ L + + A +L +++K G L+ + F V + Sbjct: 9 RRPFLRSLFGLAAGIAVASTIGLADARADVLANVQKAGTLRVAVPQDFPPFGSVGTDLKP 68 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +G+D+D ++ + K++ +P+ + R L + + D++ + RE + Sbjct: 69 RGYDIDMANLIAKELG---VKVELIPVTSTNRIPYLTTGKADLVISSLGKNPDREKVIDF 125 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + +F+G + ++ V +L G ++ V G+ +L L K + K F Sbjct: 126 SEAYAPFFNG--VFGPEDVKLTKVEELDGKTVGVTRGSVEDLELT---KIASPKVTIKRF 180 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E +AY + A + + + +I SP A +G+T Sbjct: 181 EDNNATISAYLTGQVQFVATGNVVAAA--VNDMTKLRRLGAKFLIKNSPCYVATAKGETA 238 Query: 237 WYNIVSWTHYAMVTAEELG-ITQKNIN 262 V+ L I Q+ +N Sbjct: 239 LMTKVNAIIVKAKQDGTLNDIAQRWLN 265 >gi|317404136|gb|EFV84584.1| extracellular solute-binding protein, family 3 [Achromobacter xylosoxidans C54] Length = 272 Score = 156 bits (394), Expect = 5e-36, Method: Composition-based stats. Identities = 51/271 (18%), Positives = 98/271 (36%), Gaps = 17/271 (6%) Query: 1 MYKDFF-------VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M K F + L LI S + +A L DI K G L+ I+ G+ + A Sbjct: 1 MNKSVFPPRLRAAFAGLALIGGLAVSGAAHADQLDDIMKAGKLRVAIDLGVPPYGMKDAA 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 + G DV+ R L+ + ++ +P R LQ+ + DI+ + T R+ Sbjct: 61 LNPTGSDVETARLLAKGLGVT---LEIVPTTGANRVPFLQTGKADIVISSMSVTPERQKV 117 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + + G + ++S + LS + GTT + L Sbjct: 118 IDFSTPYAAILAVVG--APRDMKLTSAADLSSKKVIATRGTTNDTELTRIAPK---DAQI 172 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I F+ A + + D + + L + P++ + ++ + LA + + Sbjct: 173 IRFDDDATSITAVVSGQADIFATAPALL--RTINEKAPAKQMESKFVMRLNMLAIGLRKN 230 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 + + + A + + EL K + V Sbjct: 231 EPALKDKLDGWVRANLKSGELNTIYKQFHGV 261 >gi|70733754|ref|YP_257394.1| cystine transporter subunit [Pseudomonas fluorescens Pf-5] gi|68348053|gb|AAY95659.1| cystine ABC transporter, periplasmic cystine binding protein [Pseudomonas fluorescens Pf-5] Length = 265 Score = 156 bits (394), Expect = 5e-36, Method: Composition-based stats. Identities = 53/263 (20%), Positives = 94/263 (35%), Gaps = 12/263 (4%) Query: 1 MYKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + ++ + L L + + L IK G + G+ F+ V NG GF Sbjct: 6 LRRNLLIGTLGLALGAGLMGQAVAGEQLQKIKDAGVINVGLEGTYPPFSYVDENGKLTGF 65 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 +V+F AL++ + K++ P AL+SK++D + + R+ + Sbjct: 66 EVEFSEALANKLG---VKVKLQPTKWDGILAALESKRLDAVVNQVTISEERKKKYDFSI- 121 Query: 120 PITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 P T Q K +G + + L G + V GT E L D +K ++ Sbjct: 122 PYTVSGIQALTQKKDEGKFKTAADLGGHKVGVGLGTNYEQWLKDNVPTAIIK----TYDD 177 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R R +A D L A +L V+ + S+ A+ +G+ E Sbjct: 178 DPTKYQDLRVGRIEAILVDR--LAAFELIKKTKDTLVVSGEPFSRQEAGVALRKGEPELL 235 Query: 239 NIVSWTHYAMVTAEELGITQKNI 261 V+ + L + Sbjct: 236 AAVNKAIEELRADGTLKKLSEKY 258 >gi|302542073|ref|ZP_07294415.1| glutamate-binding protein [Streptomyces hygroscopicus ATCC 53653] gi|302459691|gb|EFL22784.1| glutamate-binding protein [Streptomyces himastatinicus ATCC 53653] Length = 302 Score = 156 bits (394), Expect = 5e-36, Method: Composition-based stats. Identities = 40/233 (17%), Positives = 82/233 (35%), Gaps = 9/233 (3%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 ++ L +KRG + G V G GFD++ + +++ + KI + Sbjct: 53 DSPTLKAAQKRGKIVIGAKADQPFLGFVDTEGKRSGFDIEIAKMVAADLGFSADKITFKT 112 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVS 141 +++ R ++ Q+D R+ +G A Y G ++ K KGI+ Sbjct: 113 VDSNVRETSISKGQVDYYVGTYTINDERKKQVGFA--GPYYQAGADLLVRKDEKGITGPD 170 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 + G IC G+T + K + + DA T D + L Sbjct: 171 SVKGKKICSIVGSTPLQEI----KKPKYGAKTTELSKYSLCVKQLLDGQVDAVTTDDAIL 226 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 RPS+ ++ ++ P + + D + ++ + + + Sbjct: 227 KGYAAQ--RPSKLKLVEKPFTEEPYGVGMNKNDKVLRDAITDSLEKHIKNGDY 277 >gi|170759814|ref|YP_001785787.1| polar amino acid ABC transporter amino acid-binding protein [Clostridium botulinum A3 str. Loch Maree] gi|169406803|gb|ACA55214.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum A3 str. Loch Maree] Length = 267 Score = 156 bits (394), Expect = 6e-36, Method: Composition-based stats. Identities = 44/265 (16%), Positives = 95/265 (35%), Gaps = 12/265 (4%) Query: 2 YKDFFVSILCLIILFFTSF----STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 K+ SIL + ++F + S + L DIK +G G++ G+ Sbjct: 3 KKNILFSILIMGLIFMLTGCDNKSKEDTSLKDIKAKGEFVVGLDDSFPPMGFKNDKGEIV 62 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D + ++ + K+ + P+ L+L +K ID++ T R+ + Sbjct: 63 GFDIDLAKEVAEKMG---VKVVFKPVQWDGVVLSLNNKDIDVIWNGLTITEKRKEQINF- 118 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + Q +++ I S L+ ++ +Q G+++E+ L + Sbjct: 119 -SKPYVENKQIIVVNNDSNIKSKKDLNKKTVAIQLGSSSEVALDSDKNFVKSLKELKKYS 177 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E +A R D + + + +P+ +L + + D + Sbjct: 178 NNTEALMDLQAKRVD--AVVVDEVVGRYYISKKPNVFKVLDEDFGGESYGVGFRKTDNSF 235 Query: 238 YNIVSWTHYAMVTAE-ELGITQKNI 261 V ++ I++K Sbjct: 236 REAVDKALDEIIKDGTADKISEKWF 260 >gi|310827749|ref|YP_003960106.1| hypothetical protein ELI_2160 [Eubacterium limosum KIST612] gi|308739483|gb|ADO37143.1| hypothetical protein ELI_2160 [Eubacterium limosum KIST612] Length = 273 Score = 156 bits (394), Expect = 6e-36, Method: Composition-based stats. Identities = 52/276 (18%), Positives = 100/276 (36%), Gaps = 9/276 (3%) Query: 1 MYKDFF-VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K VS+ +++ T D G LK G N V F N + GF Sbjct: 3 MKKKLVGVSVALMLVASLTLAGCGGKTAEDPLADGVLKIGTNATYVPFEYRDENNEMVGF 62 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D A++ + K +++ F L S Q +++ T T R+ + ++ Sbjct: 63 DIDMGNAIAEELG---VKAEWVDTGFDGIFNGLTSNQYEMIIAGTSITEERQKTFNMS-S 118 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 P T + + L G + VQ TT++ + + F+ + Sbjct: 119 PYTANGIVIVSRNDGTPAKTADDLKGKKVGVQIETTSDYAAEKMI-ENGTDMNLSKFDAM 177 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + A D D T+ +P + I + +S P+ + + DTE+ Sbjct: 178 LDAFTALEGKTIDYILTDKPV--GQFYTSKKPDVYSITSETLSNEPIGITMRKNDTEFSQ 235 Query: 240 IVSWTHYAMVTAEELG-ITQKNINQVSKDTTNPDVQ 274 + T + +L ++QK + + N +++ Sbjct: 236 KIEETLQKLRDNGKLAELSQKWFGEDITENINTELK 271 >gi|110678538|ref|YP_681545.1| amino-acid ABC transporter, periplasmic binding protein [Roseobacter denitrificans OCh 114] gi|109454654|gb|ABG30859.1| amino-acid ABC transporter, periplasmic binding protein [Roseobacter denitrificans OCh 114] Length = 278 Score = 156 bits (394), Expect = 6e-36, Method: Composition-based stats. Identities = 61/271 (22%), Positives = 113/271 (41%), Gaps = 16/271 (5%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA----LSSAIFDDPSKI 78 +A L IK+ G L G T + + N + KG+ C A +++ + +I Sbjct: 19 HAQTLERIKQNGQLVIGFRTDAAPLSYLGEN-EPKGYTPTVCYALASKIAAEVEVPDLEI 77 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + + A++RF + + ID+L TL R + Y DG ++ KK G Sbjct: 78 IFRSVTAEDRFEQVANGNIDLLCGAATITLERRELVDF--SVPIYVDGT-VVVLKKGGPD 134 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 S+ L+G + V+A TTT L + A ++ ++F+ AA AY D Sbjct: 135 SLEGLAGMKVGVRAATTTLEALQNSLAAADIAAEVVIFDDHPTGMAALEQDEIAAYFADQ 194 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 S L + + ++ +E + +++ A+ +GDTE+ +V + T G + Sbjct: 195 SILMNMVMQSEVANELKVFDQLLTVEKQGLAMARGDTEFRLVVDRGLSELFT---EGTME 251 Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEAL 289 + + P+V+ LG+ + L Sbjct: 252 QAFARAL-----PNVKPGLGLQAMYLLSPTL 277 >gi|237737433|ref|ZP_04567914.1| extracellular solute-binding protein [Fusobacterium mortiferum ATCC 9817] gi|229421295|gb|EEO36342.1| extracellular solute-binding protein [Fusobacterium mortiferum ATCC 9817] Length = 253 Score = 156 bits (394), Expect = 6e-36, Method: Composition-based stats. Identities = 48/251 (19%), Positives = 96/251 (38%), Gaps = 10/251 (3%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K F +S++ ++ +F +SF + S L +K++G+ G++ +G+ GFD+ Sbjct: 1 MKKFLMSLVLMVCVFVSSFGADKS-LETVKEKGYFIVGLDATFAPMGYRDESGEIVGFDI 59 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D + ++ + + ++ P L+SK ID++ T R + +AF Sbjct: 60 DLAKEVAKRMGVEA---RFKPCEWDAIIFDLRSKNIDMVWNGMTITPAR--AKQVAFTKP 114 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 D Q K + V L+G + VQ G++ ++ D + + E Sbjct: 115 YLSDNQIIFTRKGTAPAKVQDLAGKVVGVQLGSSGAQSVEDN-PINKEIKELKKYATNVE 173 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A R DA D + K N + S + ++ A+ + D + + Sbjct: 174 ALMDLEAGRLDAVVMDE---ISGKYYNAKKSTLTYSVETLADEDFGVALRKQDKALVDEI 230 Query: 242 SWTHYAMVTAE 252 + M Sbjct: 231 NRLLDEMKADG 241 >gi|323356728|ref|YP_004223124.1| amino acid ABC transporter periplasmic protein [Microbacterium testaceum StLB037] gi|323273099|dbj|BAJ73244.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Microbacterium testaceum StLB037] Length = 300 Score = 155 bits (393), Expect = 6e-36, Method: Composition-based stats. Identities = 45/250 (18%), Positives = 86/250 (34%), Gaps = 11/250 (4%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 + + + G+ G +G+ GFDV+ + +++++ D KI+Y Sbjct: 56 SPTYDRMVAADKVVVGVKEDQPGLGFKDPISGERGGFDVEISQWIAASLGFDADKIEYKT 115 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVS 141 + + R L + ID T R+ + A GQG ++ + I + Sbjct: 116 IPSANREQELVNGNIDYYVGTYSITDKRKAQIDFA--GPYLITGQGLLVAADNEDIKGPN 173 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L+G +C G+T + D + ++ + RA DA T D + L Sbjct: 174 DLAGKIVCSVTGSTPLQRIRD----EYSPGDTVEYDTYTQCLEQLRAGSVDAVTTDQAIL 229 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 P I D S+ + +GDT + ++ + +KN+ Sbjct: 230 AGYVAQ--EPEAFKIAGDTFSEERYGVGLPKGDTVLKDHINTLFNDGGEVW-TALFEKNL 286 Query: 262 NQVSKDTTNP 271 P Sbjct: 287 APAGIKGEQP 296 >gi|154244135|ref|YP_001415093.1| extracellular solute-binding protein [Xanthobacter autotrophicus Py2] gi|154158220|gb|ABS65436.1| extracellular solute-binding protein family 3 [Xanthobacter autotrophicus Py2] Length = 267 Score = 155 bits (393), Expect = 7e-36, Method: Composition-based stats. Identities = 39/261 (14%), Positives = 90/261 (34%), Gaps = 11/261 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + F V L + + A L +IKKR + ++ G F N G DV Sbjct: 8 RRAFLVGATGLAVAGSLALPAFADTLEEIKKRNKILIAVDLGSPPFGMTDGNMQPTGSDV 67 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + + ++ + ++ + + + R L + + D++ + T R+ + Sbjct: 68 ESAKLFAAELGVP---LEIVQVTSPNRIPFLLTGKADMVMASFSVTDERKKVIDF--SDP 122 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 K I + L G + G++ + + M + F+ Sbjct: 123 YGVIQIVVAGPKNVAIRDIKDLVGKRLGTTRGSSNDKEATTQAQGAEM----VRFDDDAT 178 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + A + + + + A + RP++ + + ++ +P A + +GD + V Sbjct: 179 LITALVSGQVNLMASSPQVMQA--VNARRPNDPLEVKLVLKTNPYAVGLRKGDDALRDAV 236 Query: 242 SWTHYAMVTAEELGITQKNIN 262 + A + +L N Sbjct: 237 NKVIAANLKNGKLNEIYTRYN 257 >gi|148378449|ref|YP_001252990.1| polar amino acid ABC transporter amino acid-binding protein [Clostridium botulinum A str. ATCC 3502] gi|153933297|ref|YP_001382838.1| polar amino acid ABC transporter amino acid-binding protein [Clostridium botulinum A str. ATCC 19397] gi|153937497|ref|YP_001386405.1| polar amino acid ABC transporter amino acid-binding protein [Clostridium botulinum A str. Hall] gi|148287933|emb|CAL81999.1| binding-protein-dependent transport system,permease component [Clostridium botulinum A str. ATCC 3502] gi|152929341|gb|ABS34841.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum A str. ATCC 19397] gi|152933411|gb|ABS38910.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum A str. Hall] gi|322804728|emb|CBZ02280.1| amino acid ABC transporter, amino acid-binding protein [Clostridium botulinum H04402 065] Length = 267 Score = 155 bits (393), Expect = 7e-36, Method: Composition-based stats. Identities = 44/265 (16%), Positives = 95/265 (35%), Gaps = 12/265 (4%) Query: 2 YKDFFVSILCLIILFFTSF----STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 K+ SIL + ++F + S + L DIK +G G++ G+ Sbjct: 3 KKNILFSILIMGLIFMLTGCDNKSKEDTSLKDIKAKGEFVVGLDDSFPPMGFKNDKGEIV 62 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D + ++ + K+ + P+ L+L +K ID++ T R+ + Sbjct: 63 GFDIDLAKEVAKKMG---IKVVFKPVQWDGVVLSLNNKDIDVIWNGLTITEKRKEQINF- 118 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + Q +++ I S L+ ++ +Q G+++E+ L + Sbjct: 119 -SKPYVENKQIIVVNNDSNIKSKKDLNKKTVAIQLGSSSEVALDSDKDFVKSLKELKKYS 177 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E +A R D + + + +P+ +L + + D + Sbjct: 178 NNTEALMDLQAKRVD--AVVVDEVVGRYYISKKPNVFKVLDEDFGGESYGVGFRKTDNSF 235 Query: 238 YNIVSWTHYAMVTAE-ELGITQKNI 261 V ++ I++K Sbjct: 236 REAVDKALDEVIKDGTADKISEKWF 260 >gi|15890315|ref|NP_355987.1| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|15158518|gb|AAK88772.1| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 268 Score = 155 bits (393), Expect = 7e-36, Method: Composition-based stats. Identities = 47/262 (17%), Positives = 91/262 (34%), Gaps = 9/262 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V+ L+ F+ A L DI G L+C + + GFD Sbjct: 1 MKKSVIVA--GLLAATFSLTPAKADKLDDIISSGTLRCAVVLDFPPMGARDDANNPVGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+C L+ + + + ER AL S ++D+ +T TL R ++G+ Sbjct: 59 VDYCNDLAKVLGVTA---EIVETPFPERIPALMSGRVDVGVASTSDTLERAKTVGM--TV 113 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + + K GI S + G ++ AGT + L K + ++ Sbjct: 114 PYFAFEMAVTANDKSGIKSFEDMKGKTVGATAGTFEAIALEKTVKEWGVG-EFRPYQTQA 172 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 ++ A + DA + + + V+ ++ + + + N Sbjct: 173 DVFLALSQGQIDATVSTSTVAQSTVKSGKFAGVSVVGKAPYDIDYVSLFTNRDEYGFINY 232 Query: 241 VSWTHYAMVTAEELG-ITQKNI 261 ++ V + +K + Sbjct: 233 LNLFINQQVRTGRYAELYKKWV 254 >gi|251788514|ref|YP_003003235.1| extracellular solute-binding protein family 3 [Dickeya zeae Ech1591] gi|247537135|gb|ACT05756.1| extracellular solute-binding protein family 3 [Dickeya zeae Ech1591] Length = 240 Score = 155 bits (393), Expect = 8e-36, Method: Composition-based stats. Identities = 41/240 (17%), Positives = 91/240 (37%), Gaps = 11/240 (4%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 A DI+KRG L+ + F V + +G+D+D L+ + K+Q +P+ Sbjct: 2 ADQWQDIQKRGVLRVAVPQDFPPFGSVGTDLQPQGYDIDMAHYLADEM---KLKLQLVPV 58 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 + R LQ+ ++D++ + RE + + +F G K+ + + L Sbjct: 59 TSANRVPYLQTDKVDLVISSLGKNAEREKVIDFSSAYAPFF--LGVFGPKETDVGAPEAL 116 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 G ++ V G ++ L + +E +AY + + + A Sbjct: 117 QGKTVGVTRGAVEDMVLTETAPK---TADIKRYEDNNTTLSAYMSGQVQYIATGNLVVAA 173 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNIN 262 + P++ + ++ SP + + + V+ + L G+++K + Sbjct: 174 IA--EKNPAKAPVAKFMLKDSPCYIGLKKDEPALKAKVNELIEKALKDNTLNGLSEKWLK 231 >gi|326692922|ref|ZP_08229927.1| amino acid ABC transporter periplasmic protein [Leuconostoc argentinum KCTC 3773] Length = 288 Score = 155 bits (393), Expect = 8e-36, Method: Composition-based stats. Identities = 52/273 (19%), Positives = 104/273 (38%), Gaps = 22/273 (8%) Query: 5 FFVSILCLIILFFTSFST----NASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 +++ L +++ T+ + + L +++ G + G+ F + G +GF Sbjct: 16 VLAAVIVLGLMWATATAKKNSEHEDTLARVERLGRIVWGVKADTKLFGLMNTKTGTPEGF 75 Query: 60 DVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 DVD +AL+ I P Q++P++A + L++ ID T RE + Sbjct: 76 DVDIAKALTVQIAKQTGVPMSAQFIPVSASSKMQLLKNTNIDGSVSTMTITPEREKIIDF 135 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPI 174 + GQ ++ K GI SV ++ + +I V GTT + + + Sbjct: 136 --TKPYFDAGQSILVKKDSGIHSVKDMNDSKYTIIVVVGTTAATEIKKFAPKA----KVL 189 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + A ++ + A + D + LY N E+ I + P A Sbjct: 190 AVQDYATGMQALKSGQGQAMSTDNAILYGFATENP---EYHIAGGTFTHGPYGIAFDNDQ 246 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 ++ + A+ T ++ G+ I + D Sbjct: 247 GP---MIREANKALATIKKNGVYNALIKKWFSD 276 >gi|300172544|ref|YP_003771709.1| glutamine-binding protein [Leuconostoc gasicomitatum LMG 18811] gi|299886922|emb|CBL90890.1| glutamine-binding protein [Leuconostoc gasicomitatum LMG 18811] Length = 288 Score = 155 bits (393), Expect = 8e-36, Method: Composition-based stats. Identities = 52/273 (19%), Positives = 108/273 (39%), Gaps = 22/273 (8%) Query: 5 FFVSILCLIILFFTSFST----NASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 V+++ L +++ T+ + + L ++K G + G+ F + G +GF Sbjct: 16 VLVAVIVLGLMWATATANRNAEHQDTLARVEKLGRIVWGVKADTRLFGLMDTKTGISQGF 75 Query: 60 DVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 D+D RAL+ I P +++P++ + L++ ID T RE + Sbjct: 76 DIDIARALTVQISKQTGVPMSAEFVPVSTASKMQLLKNTNIDGSVSTMTITPEREKIIDF 135 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPI 174 + + GQ ++ K GI+S+ ++ + +I V GTT A + + Sbjct: 136 TNQ--YFDAGQSILVKKDSGINSIKDMNSSKYTIIVVVGTTAATETAKFAPKA----KLL 189 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + A ++ + A + D + LY N ++ I + P A Sbjct: 190 AVQDYATGMQALKSGQGQAMSTDNAILYGFATENP---DYHIAGGTFTHGPYGIAFDNNQ 246 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 ++ T+ A+ T ++ GI + I + + Sbjct: 247 KP---MIKETNAALATIKQNGIYNQLIKKWFSN 276 >gi|300311002|ref|YP_003775094.1| amino acid ABC transporter/signal transduction system periplasmic protein/domain-containing protein [Herbaspirillum seropedicae SmR1] gi|300073787|gb|ADJ63186.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain protein [Herbaspirillum seropedicae SmR1] Length = 279 Score = 155 bits (392), Expect = 9e-36, Method: Composition-based stats. Identities = 49/274 (17%), Positives = 87/274 (31%), Gaps = 15/274 (5%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDV 61 K L + A L +I+ RG L C GFDV Sbjct: 9 KRMGKGSLLVACAALFPGLAQADRLAEIQARGTLVCATLANNEPLGFPDPQSRQVVGFDV 68 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D C A++ + +++ + + R AL Q D++S +T R + Sbjct: 69 DMCAAVARRLG---VQMEQKSVTVEGRLPALIEGQADLVSAALGYTRERARQIDFTAS-- 123 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y + I+ G++ +S L+ I +T E + F + Sbjct: 124 HYQNPIKLIVQSDSGLNLISDLADKRISANRSSTPEQAVRRVLPKA----MLQTFADTPQ 179 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A R D IS ++ N+ + +S P A + +G+ + V Sbjct: 180 AFLALAQGRADGLA--ISMPSGIRFVNESAGRFKFVEGALSWEPTALGVKKGERRLRDAV 237 Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 + A E+ G + T ++ R Sbjct: 238 NAALAA---LEKDGEIDALWTKWFGPKTKFNIPR 268 >gi|187777536|ref|ZP_02994009.1| hypothetical protein CLOSPO_01127 [Clostridium sporogenes ATCC 15579] gi|187774464|gb|EDU38266.1| hypothetical protein CLOSPO_01127 [Clostridium sporogenes ATCC 15579] Length = 267 Score = 155 bits (392), Expect = 9e-36, Method: Composition-based stats. Identities = 45/265 (16%), Positives = 95/265 (35%), Gaps = 12/265 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASI----LGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 K+ SIL + ++F + N S L DIK +G G++ G+ Sbjct: 3 KKNILFSILIMGLIFMLTGCGNKSKEDTSLKDIKDKGEFVVGLDDSFPPMGFKNDKGEIV 62 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D + ++ + K+ + P+ L+L +K ID++ T R+ + Sbjct: 63 GFDIDLAKEVAKKMG---VKVVFKPVQWDGVVLSLNNKDIDVIWNGLTITEKRKEQINF- 118 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + Q +++ I S L+ ++ +Q G+++E+ L + Sbjct: 119 -SKPYVENKQIIVVYNDSNIKSKKDLNKKTVAIQLGSSSEVALDSDKDFVKSLKELKKYS 177 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E +A R D + + + +P+ +L + + D + Sbjct: 178 NNTEALMDLQAKRVD--AVVVDEVVGRYYISKKPNVFKVLDEDFGGESYGVGFRKTDNSF 235 Query: 238 YNIVSWTHYAMVTAE-ELGITQKNI 261 V ++ I++K Sbjct: 236 REAVDKALDEVIKDGTADKISEKWF 260 >gi|67923374|ref|ZP_00516855.1| extracellular solute-binding protein, family 3 [Crocosphaera watsonii WH 8501] gi|67854799|gb|EAM50077.1| extracellular solute-binding protein, family 3 [Crocosphaera watsonii WH 8501] Length = 261 Score = 155 bits (392), Expect = 9e-36, Method: Composition-based stats. Identities = 47/232 (20%), Positives = 88/232 (37%), Gaps = 10/232 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K + L + + + A+ L +IK+RG L + + + +G ++ Sbjct: 7 RKLVLILTLGVFLNLGNNHLVIAATLEEIKERGKLLVAVKDNIRPLGFLDHKNQLQGLEI 66 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D R L+ I DP + P++ +ER + ++D+ R + P Sbjct: 67 DLARQLAQDILGDPQALILQPVSNQERLQKVIDGEVDLAIARVTINSSRGRLVNF--SPY 124 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y DG G I + + I +V L + I V G++T + +A + I + +E Sbjct: 125 YYLDGTGIITNNGR-IRAVDHLRESKIAVLEGSSTIAVI----RAELPQAKLIGVKSYQE 179 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + +A+ D S L P + LP +S L + +G Sbjct: 180 AMTLLETEKVEAFVADNSILTGWVQQ--YPQYYR-LPVRLSGEALGVVMPKG 228 >gi|241662510|ref|YP_002980870.1| family 3 extracellular solute-binding protein [Ralstonia pickettii 12D] gi|309781092|ref|ZP_07675830.1| ABC transporter [Ralstonia sp. 5_7_47FAA] gi|240864537|gb|ACS62198.1| extracellular solute-binding protein family 3 [Ralstonia pickettii 12D] gi|308920158|gb|EFP65817.1| ABC transporter [Ralstonia sp. 5_7_47FAA] Length = 303 Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats. Identities = 48/260 (18%), Positives = 96/260 (36%), Gaps = 25/260 (9%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK---------GFDVDFCRALS 68 T +++ +L I+ G ++ V F+ G+ +D C + Sbjct: 25 TVQASSTPVLDRIRDTGAVRVAYRESSVPFS---------FYDADKKPIGYAMDLCLRVV 75 Query: 69 SAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 + D K+QY+ + R A+ + D+ +T RE +AF Y Sbjct: 76 DKLRTDLKRPDLKVQYVMVTPSTRMPAIIEGKADLECGSTTNN--RERREKVAFTIPHYI 133 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 G ++ GI L G ++ GTT+ L + + + + E A Sbjct: 134 AGIRMLVKTSSGIRKWDDLRGKTVVTTKGTTSVAELRKMNDVRVLNMNFLEAKDHAESFA 193 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + DA+ D LY + P ++ ++ D+++ P A + + DTE+ +V Sbjct: 194 MVETGKADAFAMDDVLLYGFRANTKTPGDYAVVGDMLTVEPYAIMLSKDDTEFKRLVDRA 253 Query: 245 HYAMV-TAEELGITQKNINQ 263 ++ + + +K Q Sbjct: 254 MTNIILDYDAEKLYKKWFQQ 273 >gi|227505906|ref|ZP_03935955.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Corynebacterium striatum ATCC 6940] gi|227197534|gb|EEI77582.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Corynebacterium striatum ATCC 6940] Length = 355 Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats. Identities = 45/242 (18%), Positives = 97/242 (40%), Gaps = 12/242 (4%) Query: 29 DIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 DI KRG + G++ + A+G+ +GF+VD R ++ IFDDP+K+ + + + E Sbjct: 93 DIYKRGRIIVGVDRSNNLMSYRDTASGEVRGFEVDIAREIARDIFDDPNKVDFRFVESSE 152 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 R AL + +DI+ R + R+ + ++ GI S+ +G + Sbjct: 153 RTSALNERSVDIVIRTMSISAERQREVAF--SAPYMTTKTKLLVLSSSGIRSIDDTAGKT 210 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 +C G+T + D + + + + A + ++ D D + L + Sbjct: 211 LCAVQGST----IVDTVRREASTSNILQTRSWGDCLMALQLNQIDGVVADDALLSGMLAQ 266 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDT--EWYNIVSWTHYAMVTAEELGITQKNINQVS 265 + S I+ ++ A+ + D+ + ++ + + + G + Sbjct: 267 D---SYTSIVGAPLTSEDYGVAVRKPDSFYDSKPLLRQVNSTLERIRQDGTWDRLFATWL 323 Query: 266 KD 267 D Sbjct: 324 GD 325 >gi|15600269|ref|NP_253763.1| binding protein component of ABC transporter [Pseudomonas aeruginosa PAO1] gi|116053223|ref|YP_793545.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa UCBPP-PA14] gi|218894175|ref|YP_002443044.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa LESB58] gi|254238217|ref|ZP_04931540.1| hypothetical protein PACG_04343 [Pseudomonas aeruginosa C3719] gi|254244042|ref|ZP_04937364.1| hypothetical protein PA2G_04876 [Pseudomonas aeruginosa 2192] gi|313110115|ref|ZP_07796017.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa 39016] gi|9951369|gb|AAG08461.1|AE004920_11 probable binding protein component of ABC transporter [Pseudomonas aeruginosa PAO1] gi|115588444|gb|ABJ14459.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas aeruginosa UCBPP-PA14] gi|126170148|gb|EAZ55659.1| hypothetical protein PACG_04343 [Pseudomonas aeruginosa C3719] gi|126197420|gb|EAZ61483.1| hypothetical protein PA2G_04876 [Pseudomonas aeruginosa 2192] gi|218774403|emb|CAW30220.1| probable binding protein component of ABC transporter [Pseudomonas aeruginosa LESB58] gi|310882519|gb|EFQ41113.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa 39016] Length = 266 Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats. Identities = 58/273 (21%), Positives = 106/273 (38%), Gaps = 17/273 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L + L + A + D KRG L+ G++ + F G GF+ Sbjct: 1 MKKYLASLVLGVCALVGVASVQAAGAVEDAVKRGTLRVGMDPTYMPFEMTNKRGQIIGFE 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A++ ++ K++ + + AL + + D++ T R L L F Sbjct: 61 VDLLKAMAKSMG---VKLELVSTSYDGIIPALLTDKFDMIGSGMTLTQERN--LRLNFSE 115 Query: 121 ITYFDGQGFIMHK--KKGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVF 176 GQ ++ K + I S L+ SI + GTT E+ F Sbjct: 116 PFIVVGQTLLVRKELEGKIKSYKDLNDPQYSITSKIGTTGEIVARKLISKAKY----HGF 171 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + E + DA+ D S + ++ + V L + PLA + +GD Sbjct: 172 DNEPEAVMDVVNGKADAFIYD-SPYNVVAVSKFGAGKLVYLDQPFTYEPLAFGLKKGD-- 228 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 Y+ +++ + + E G Q+ ++ K+T Sbjct: 229 -YDSINFINNFLHQIREDGTYQRIHDKWFKNTE 260 >gi|118470248|ref|YP_887061.1| glutamate binding protein [Mycobacterium smegmatis str. MC2 155] gi|118171535|gb|ABK72431.1| glutamate binding protein [Mycobacterium smegmatis str. MC2 155] Length = 273 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 48/277 (17%), Positives = 97/277 (35%), Gaps = 14/277 (5%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K ++ I L F + + G + G G + +G GFDVD Sbjct: 6 KRVAGAVALAIALPFAATACGGGDSGGDSDT--IVIGTKYDQPGLGLKQPDGTLTGFDVD 63 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + +++ + +I++ + +R +Q+ Q+D ++ T R+ + A Sbjct: 64 VAKYVANELGYSEDQIEWKEAPSAQRETLIQNGQVDFIAATYSITDSRKEKVDFA--GPY 121 Query: 123 YFDGQGFIMHKKKG-ISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 GQ ++ I+ + L + +C +G+T + D + ++ Sbjct: 122 LITGQSLLVRADNNDITGAASLENNKKLCSVSGSTPAQRIKDEYP----GVQLQQYDTYS 177 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A + DA T D L + P ++ D S+ + + DTE N Sbjct: 178 ACVEALKNGAVDALTTDEVILAGYAAQS--PGTFKLVGDTFSEERYGIGLKKDDTELRNK 235 Query: 241 VSWTHYAMVTAEELG-ITQKNINQVS-KDTTNPDVQR 275 ++ M ++ KN+ + P V R Sbjct: 236 INDAIEKMESSGAWKEAFDKNLGPAGIQAPQPPAVDR 272 >gi|290956973|ref|YP_003488155.1| glutamate uptake system binding subunit [Streptomyces scabiei 87.22] gi|260646499|emb|CBG69596.1| glutamate uptake system binding subunit [Streptomyces scabiei 87.22] Length = 283 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 45/241 (18%), Positives = 88/241 (36%), Gaps = 7/241 (2%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 +K GI G +G + GFDVD ++ + DP +I+++ + +R AL Sbjct: 44 KIKVGIKYDQPGLGLKNPDGSFSGFDVDVATYVAKELGYDPKQIEFVETKSADRENALAR 103 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 + ++ R + A Q ++ IS + L+G ++C G+ Sbjct: 104 GDVKFIAATYSINPERAKLVDFA--GPYLLAHQDLLVKADSDISKGTDLNGKTLCSVTGS 161 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T+ + K K + E A ++ DA T D S L ++ + Sbjct: 162 TSAENVK---KDIAPKAQLKEYGGYSECIAGLQSGAVDAVTTDDSILAGFAAQDNYKGQF 218 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT--AEELGITQKNINQVSKDTTNPD 272 + +S + +GD + ++ MV+ A E + + K+ P Sbjct: 219 KLAGLKLSNENYGIGVKKGDKATVDKINAALEKMVSDGAWETAVKENFGPADYKNEPAPK 278 Query: 273 V 273 + Sbjct: 279 I 279 >gi|15893671|ref|NP_347020.1| periplasmic amino acid-binding protein [Clostridium acetobutylicum ATCC 824] gi|15023229|gb|AAK78360.1|AE007552_10 Periplasmic amino acid-binding protein [Clostridium acetobutylicum ATCC 824] gi|325507793|gb|ADZ19429.1| Periplasmic amino acid-binding protein [Clostridium acetobutylicum EA 2018] Length = 272 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 59/292 (20%), Positives = 106/292 (36%), Gaps = 39/292 (13%) Query: 1 MYKD-------FFVSILCLIILF---FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV 50 M K +++ + +L T S+N L +KK G LK G++ Sbjct: 1 MKKSVKKIMAVILTAVIGVGLLAGCSSTGSSSNDESLSKVKKAGVLKVGLSDDYPPMEFR 60 Query: 51 KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 +N GFD+D A+ + K+Q + + F+AL++K+ D++ T R Sbjct: 61 DSNNKVSGFDIDMINAIGKKMG---VKVQIVTNSFDGIFVALKAKKFDMVQSCVSITDER 117 Query: 111 EISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 + +L + G + K I L G + QAGTT E L + N Sbjct: 118 KSTLLF--SDPYIYGGVAVFVKKSNTTIKKPEDLKGKVVGCQAGTTAEDALKKF----NG 171 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 +++ + +R +A D + T P ++ + + K P+ A Sbjct: 172 LKETKKYQQTTDAFLDLENNRIEAVVADP--MVGDYYTTKNPGKYEKISKYLGKEPVGAA 229 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV-QRFLGID 280 + D + QK N++ KD T + ++ G D Sbjct: 230 FRKQDKTLKDA----------------YQKAYNELKKDGTLSKLSNKWFGYD 265 >gi|241762906|ref|ZP_04760969.1| extracellular solute-binding protein family 3 [Acidovorax delafieldii 2AN] gi|241368081|gb|EER62286.1| extracellular solute-binding protein family 3 [Acidovorax delafieldii 2AN] Length = 278 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 55/240 (22%), Positives = 90/240 (37%), Gaps = 14/240 (5%) Query: 13 IILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSA 70 ++ T+ + +A L IK+RG L G+ F + A G++V ++ Sbjct: 16 LLCAITAPAAHADATLDKIKQRGKLVVGVILSGPPFGTIDPATQRHVGYNVLLAEGVAKG 75 Query: 71 IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD-GQGF 129 + ++ + + R LQ ++DIL N WT R S L+F P + + G Sbjct: 76 LGVT---VETVQVQPSNRVQFLQQGKVDILVANMQWTQER--SEILSFVPTPFEEVGGAA 130 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 I K GI + L G +CV G+ LAD H F E A R Sbjct: 131 IAKKGTGIKAWDDLRGEPVCVSQGSNFTKPLAD-----QHGAHIKAFRGQPESLLALRGG 185 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVIL-PDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 C A L L + N ++ I+ P + SP + +G+ + + Sbjct: 186 NCTAAVHVSPTLRELVVENPDWKDYEIVSPSDLIPSPSVIWLRKGENDTQAAIDRVVQDW 245 >gi|330427594|gb|AEC18928.1| extracellular solute-binding protein [Pusillimonas sp. T7-7] Length = 268 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 41/266 (15%), Positives = 88/266 (33%), Gaps = 15/266 (5%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 + + S + A + ++K++G L G+ + + G+D D R L+ Sbjct: 16 LATCTVFALGSSAAVAETIDEVKEKGELTVGMLVDFPPYGILNTENKPDGYDADVARQLA 75 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 + K+ +P+ R L + ++D+L + T R + Sbjct: 76 KELG---VKVNIVPVTGPNRIPFLLTNKVDLLVASLAITPERAKQVQF--SDPYSAAQIV 130 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 K I+ LSG I V +T ++ + + F+ A + Sbjct: 131 VFGGKDTKIAKAEDLSGLRIGVARASTQDIAVTKISPK---DANIRRFDDDASAMQALLS 187 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 + DA S A ++ P ++ + +A A+ G+ V+ Sbjct: 188 GQVDAI--GCSTTVAGQIAKRSPDRFE-NKFVLLQQEMAVAMRPGEPNTLKAVNEAVEKN 244 Query: 249 VTAEELGITQKNINQVSKDTTNPDVQ 274 + E K + + P+++ Sbjct: 245 IKNGE---FSKLFEKWLG-SPLPELK 266 >gi|296274226|ref|YP_003656857.1| family 3 extracellular solute-binding protein [Arcobacter nitrofigilis DSM 7299] gi|296098400|gb|ADG94350.1| extracellular solute-binding protein family 3 [Arcobacter nitrofigilis DSM 7299] Length = 271 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 58/275 (21%), Positives = 110/275 (40%), Gaps = 17/275 (6%) Query: 2 YKDFFVSILCLIILFFTSFSTN---ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 K ++IL + + N S L + +RG L+ + G + F G G Sbjct: 1 MKKMLLAILVFATVNLVASDINLWKNSTLNKVLERGELQVCLEPGYMPFEMKDKKGRIIG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 +DVD + ++ + K++ LP AL + + DI+ T R + + A Sbjct: 61 YDVDVAQLMAKEMG---VKLKLLPTAWDGIIAALVTGKCDIIISGMTVTQQRNLKVNFAD 117 Query: 119 RPITYFDGQGFIMHKK--KGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPI 174 GQ +M+K I S +L +I + GT+ E+ + ++K + Sbjct: 118 --PYLVVGQTVLMNKSLEGKIKSAKELDNPKYTIVTKLGTSAEIAIRKFYKKA----KIV 171 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 FE + + + DA+ D L + + + V L ++ PLA AI +GD Sbjct: 172 TFETEADAVSEVLNNNADAFVYDQP-YNILFMADKGKGKLVHLDTPLTFEPLAWAIRKGD 230 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 ++ N ++ + + + + ++ KDTT Sbjct: 231 PDFLNWLNNFLRQIKGDKVVDFYGQINDKWLKDTT 265 >gi|218247435|ref|YP_002372806.1| family 3 extracellular solute-binding protein [Cyanothece sp. PCC 8801] gi|257061227|ref|YP_003139115.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 8802] gi|218167913|gb|ACK66650.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 8801] gi|256591393|gb|ACV02280.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 8802] Length = 272 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 47/259 (18%), Positives = 91/259 (35%), Gaps = 15/259 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K +++L LI L S A L I++ G + G + F G+W G+ Sbjct: 1 MKKT-VIALLSLIFLASFSLKVVAETILDKIERTGEMTAGARKDAIPFGYEDEGGNWTGY 59 Query: 60 DVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 V+ + + P K+ + RF +Q++ +D++ T T R + Sbjct: 60 SVELIHLIHQELEKSLKKPIKLTFKEATLDNRFEIVQTETVDLVCEATTITQERLKKVDF 119 Query: 117 AFRPITYFDGQGFIMH-KKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + + G F++ K ++ LS I GTTT+ + + + K Sbjct: 120 SL--PFFMTGAQFLVKLKDASTFDINGTLSKIPIAFIPGTTTQEIIPQIYPFADWKV--- 174 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYA-LKLTNDRPSEHVILP-DIISKSPLAPAIIQ 232 + E + A D L L + P + ++P I+ + + Sbjct: 175 -VKSRREGLLKLKKGEVQAVVSDGVLLVGELVQVGNNPRDFTLIPRQPITTELYGCMLPK 233 Query: 233 GDTEWYNIVSWTHYAMVTA 251 + +W + + T Sbjct: 234 NNPDWKEFIDNVIVSQKTL 252 >gi|126730632|ref|ZP_01746442.1| probable amino acid ABC transporter, substrate-binding protein [Sagittula stellata E-37] gi|126708798|gb|EBA07854.1| probable amino acid ABC transporter, substrate-binding protein [Sagittula stellata E-37] Length = 262 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 41/220 (18%), Positives = 86/220 (39%), Gaps = 9/220 (4%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 A L +I++RG ++ G+ + F +G G+DV+ + ++ + ++ Sbjct: 24 QAGTLDEIRERGTIRVGVPSDSPPFGMKAPDGGLVGYDVEMAQLIADDLG---VALEITN 80 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 R L S ++DI+ + R+ + + + +++G ++ Sbjct: 81 AVGSNRVPLLTSGRVDIVISSFGKNEERDKVIDFSDQYAPFYNG--VFGPADIEVNGPED 138 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G S+ V GT +L L+ FE +AY A D + Sbjct: 139 LKGYSVGVTTGTIEDLELSA---KTGDDVTITRFESGASGFSAYFAGAVDFFATGNVTAA 195 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 AL + N ++ +I+ SP + +GDT+ + ++ Sbjct: 196 AL-MENPNLPREIVPKFLINSSPCYIGVREGDTQMLDYLN 234 >gi|218886440|ref|YP_002435761.1| extracellular solute-binding protein family 3 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218757394|gb|ACL08293.1| extracellular solute-binding protein family 3 [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 272 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 54/254 (21%), Positives = 97/254 (38%), Gaps = 21/254 (8%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 S L +I RG L+ G + G + F NG++ GFD+D + L+ A+ ++++ Sbjct: 28 AKKSTLNEIMARGELRVGFDAGYMPFEMTDKNGNYVGFDIDLAKELAKAMG-----VKFV 82 Query: 82 PLNAKER--FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGI 137 P+N AL S + DI+ T R + + A GQ I+ KK + Sbjct: 83 PVNTDFDGMIPALLSDKFDIIISGMTVTQERNLRINFAN--PYIVVGQSVIVSKKHEGKV 140 Query: 138 SSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 + L+ ++ + GTT E K FE+ + + DA+ Sbjct: 141 KTWEDLNKPEYTVVSRLGTTGEEAAKRMLPKAKYK----SFEKEADGALEVINGKADAWV 196 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D+ + + + L + PL I +GD ++ N + + + G Sbjct: 197 YDMPFNVVFMAEQGK-GKAIHLDKPFTYEPLGFGIKKGDPDFLNFLD---NFLSQIKNDG 252 Query: 256 ITQKNINQVSKDTT 269 + N+ K T Sbjct: 253 RYDRIYNKWMKSTE 266 >gi|311742426|ref|ZP_07716235.1| glutamate ABC superfamily ATP binding cassette transporter, binding protein [Aeromicrobium marinum DSM 15272] gi|311314054|gb|EFQ83962.1| glutamate ABC superfamily ATP binding cassette transporter, binding protein [Aeromicrobium marinum DSM 15272] Length = 293 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 45/232 (19%), Positives = 83/232 (35%), Gaps = 11/232 (4%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYL 81 + + ++ ++G +K G+ G A D GFD + + L+S + D I+++ Sbjct: 44 AGTRMAELNEQGTVKIGVKFDQPGIGFKGATQDVPSGFDPEMGKILASKLGIDSQDIEWV 103 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM-HKKKGISSV 140 + R L+S +D + + T R +G Y GQ ++ IS Sbjct: 104 ETISSNREPFLESGTVDFVIASYSITDDRRTIVG--QAGPYYVTGQALMVAADDDSISGP 161 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L G +C G+T+ T+ + + A P F+ E DA T D + Sbjct: 162 EDLDGKIVCSVTGSTSIKTVEEEYGAQ-----PAPFDTYSECTDQLLNGSVDAVTTDAAI 216 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 L + P + ++ D S+ E ++ A Sbjct: 217 LLGYAA--ENPDQLKVVGDPFSEERYGIGYGLDHPELCEFINEVLEAAYDDG 266 >gi|54288345|gb|AAV31633.1| putative amino acid-binding protein [uncultured alpha proteobacterium EBAC2C11] Length = 261 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 52/265 (19%), Positives = 104/265 (39%), Gaps = 11/265 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K + L ++ NA L I G +K + F V A+G+ +G+DV Sbjct: 1 MKKILSFLTALTLMIGPISFANAGDLSKILADGVVKIAVPESFAPFGSVGASGEHEGYDV 60 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D + ++ + K++ +P+ +K+R L++ ++D++ R S+ + Sbjct: 61 DVAKLIAEDLG---VKLELVPVVSKQRIPFLETDRVDLVVSVMGANPKRAKSINFSSAYA 117 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 ++ G K +SS LSG ++ V GT +L L + F Sbjct: 118 PFYSGA--FASSKIDVSSPGDLSGLTVGVTGGTLEDLELTKVAPS---DAKITRFGDNAA 172 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +AY + + + A LT+ P+ + II SP + +G+ + V Sbjct: 173 TLSAYTSGQVQVLVTGNT--AAASLTDADPNLDLERKYIIKDSPCFIGVKKGNEDLLRWV 230 Query: 242 S-WTHYAMVTAEELGITQKNINQVS 265 + + + + I++K + Q Sbjct: 231 NVFILHKKLGGNLNAISEKWLGQAL 255 >gi|324017956|gb|EGB87175.1| phage integrase, SAM-like domain protein [Escherichia coli MS 117-3] Length = 491 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 48/272 (17%), Positives = 94/272 (34%), Gaps = 17/272 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + ++ + ++ S + A +L +K+RG L G+ F+ +G GF+ Sbjct: 233 RQALMGVMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFE 292 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F + L+ + + S P +L SK+ID++ + R+ Sbjct: 293 VEFAQQLAKHLGVEAS---LKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDF--ST 347 Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G ++ K I + + L G + V GT ++ + + ++ Sbjct: 348 PYTISGIQALVKKGNEGTIKTAADLKGKKVGVGLGT----NYEEWLRQNVQGVDVRTYDD 403 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R R DA D L AL L + + S+ A+ +G+ + Sbjct: 404 DPTKYQDLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLL 461 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 V+ M L + D T Sbjct: 462 KAVNDAIAEMQKDGTLQALSE--KWFGADVTK 491 >gi|119387649|ref|YP_918683.1| extracellular solute-binding protein [Paracoccus denitrificans PD1222] gi|119378224|gb|ABL72987.1| amino acid ABC transporter substrate-binding protein, PAAT family [Paracoccus denitrificans PD1222] Length = 266 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 92/259 (35%), Gaps = 8/259 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + A L DI+ RG + G++ G F V + + G D Sbjct: 1 MTIRNLTLAALTAVGLAAALPAGADTLSDIRDRGTINIGVDIGQAPFGMVDGSMNQTGSD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD R L+ + K+ + + R L + ++D++ + T R+ + Sbjct: 61 VDTARKLAEDLG---VKLNVVSVAPANRIPFLLTGKVDVVVASFSITEERKKQVDF--SK 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +S + L G I V +T + + D A+++K + ++ Sbjct: 116 PYAVSEVVVATTGGLELSGPADLEGRQIAVTRASTNDTLITDAIAANDVKATIVRYDDNA 175 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A + + D Y S L + PS + ++ PLA + + + E + Sbjct: 176 MTTNAVLSGQHDVYVVAQSLLV--PINEANPSRKIEPQFVLRTYPLAIGLRKNEPELKDW 233 Query: 241 V-SWTHYAMVTAEELGITQ 258 + +W + + I Q Sbjct: 234 LDNWVDENLANGKLNEIYQ 252 >gi|50123405|ref|YP_052572.1| putative extracellular solute-binding protein [Pectobacterium atrosepticum SCRI1043] gi|49613931|emb|CAG77384.1| putative extracellular solute-binding protein [Pectobacterium atrosepticum SCRI1043] Length = 279 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 41/250 (16%), Positives = 90/250 (36%), Gaps = 13/250 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59 M + + + L A +L DI RG L+C + + + F+ G Sbjct: 1 MTLKYSACSVLALPLVLVFSPAKADLLSDITARGDLQCAVYSDVPPFSSPDPKTRQLAGM 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD C AL+ + K+ +P + + R + + + D+L N +T R + Sbjct: 61 DVDLCHALAKEMG---VKVTLVPTSVEARIAVIATGRADVLIANLAYTKTRGNQIQF--S 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + ++ K ++ G I GTT+E ++ H + F+ Sbjct: 116 DPYYVAKEMLLVKKANADKAIEDFKGQRISATKGTTSEQSI------HLKGGKAVTFQDS 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPS-EHVILPDIISKSPLAPAIIQGDTEWY 238 A + ++ + + + + E ++ + ++ P+ + + + Sbjct: 170 ASAFLALQQNKAVGFVTNTMTGIKMISQAKKDGIELAMIKEPMALEPIGVGMKRDEPALL 229 Query: 239 NIVSWTHYAM 248 V+ + M Sbjct: 230 AKVNSSLKTM 239 >gi|206901753|ref|YP_002250771.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Dictyoglomus thermophilum H-6-12] gi|206740856|gb|ACI19914.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Dictyoglomus thermophilum H-6-12] Length = 257 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 50/244 (20%), Positives = 90/244 (36%), Gaps = 14/244 (5%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 A + IKK G LK G + F ++ + GFD+D + ++ A+ K+Q + Sbjct: 22 AGAVERIKKAGVLKVGSDVAYAPFEFMEGD-KPVGFDIDIAQEIAKALG---VKLQIINT 77 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQ 142 + AL++K+ DI+ T R+ + + Y GQ ++ K I+S Sbjct: 78 SFDGIIAALKAKKFDIIISAMTITEERKKEIDFSI--PYYDSGQIIVVRSDNKDINSEKD 135 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G + VQ GTT ELT +K +E + E R DA D+ Sbjct: 136 LKGKIVGVQLGTTGELTAKKLKDQVGIK-EIRSYETIPEAFMDLELGRLDAVINDLPVSL 194 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 N + + + A+ + D + ++ ++ G + Sbjct: 195 YYSKNNPK---LKCVGKPFTIEQYGIAVRKEDKDLLKKINEILT---NLKKTGKYNQIYK 248 Query: 263 QVSK 266 + Sbjct: 249 KWFG 252 >gi|298252814|ref|ZP_06976608.1| ABC-type amino acid transport/signal transduction system, periplasmic component [Gardnerella vaginalis 5-1] gi|297533178|gb|EFH72062.1| ABC-type amino acid transport/signal transduction system, periplasmic component [Gardnerella vaginalis 5-1] Length = 255 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 41/221 (18%), Positives = 86/221 (38%), Gaps = 9/221 (4%) Query: 33 RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92 + ++ GI G K +G + GFDVD + ++ + +I + +K+R L Sbjct: 12 KKVIRIGIKFDQPGMGF-KKSGTYVGFDVDVAKYVAKKLGYSEDQIVWKESPSKQRETML 70 Query: 93 QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQ 151 Q+ +D++ T R+ + A + GQ ++ K + +S + L G +C Sbjct: 71 QNGDVDMIVATYSITDARKKMVSFA--GPYFIAGQDLLIRKDEHKVSGPNDLDGKRLCSV 128 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 +G+T+ + + + + + K + E A + DA T D L L + Sbjct: 129 SGSTSAIAIKERYSS---KVQLMQQPGYAECATALFSGIVDAVTTDDIILAGLATASR-- 183 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 ++ + I +G+T ++ M+ Sbjct: 184 GRLKLVGKPFTAEYYGIGIKKGNTGLAKKINAALKDMIRNG 224 >gi|300811758|ref|ZP_07092231.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497257|gb|EFK32306.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 276 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 57/270 (21%), Positives = 102/270 (37%), Gaps = 14/270 (5%) Query: 2 YKDFFVSILCLIILFFTSF------STNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 +K + L L T+ + IKKRG L G++ V + +G Sbjct: 4 FKKILLLGLVLSCFLTTACSNLTKEANQKDTWAKIKKRGSLVIGLDDTFVPMDFRQKDGQ 63 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G+DVD +A+ + K + ++ + L++ ID+L T R+ + Sbjct: 64 LVGYDVDLAKAVCKKLG---LKADFQTIDWSMKETELRNGTIDVLWNGYSVTSQRKKKVA 120 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + + Q ++ K GI S +Q+ G +I Q+G+T ++ L K K + Sbjct: 121 FSRS--YLRNRQVLVVKKSSGIKSFAQMKGQAIGAQSGSTAQIWLDGSQKVIKPKSKV-L 177 Query: 176 FERVEEIDAAYRAHRCDAYTGDISAL-YALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 ++ + A R D + Y +K D S VIL + + A + +GD Sbjct: 178 YDTIPSAFLDLNAGRIKGILLDETYAEYYIKHEADSKSYQVILNKEVPEDLFAVGMRKGD 237 Query: 235 TEWYNIVSWTHYAMVTAEEL-GITQKNINQ 263 ++ + L I QK Q Sbjct: 238 KNLKKKINQALAELQADGTLAKINQKWFGQ 267 >gi|116695743|ref|YP_841319.1| ABC transporter periplasmic protein [Ralstonia eutropha H16] gi|113530242|emb|CAJ96589.1| ABC-type transporter, periplasmic component: PAAT family [Ralstonia eutropha H16] Length = 267 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 49/259 (18%), Positives = 95/259 (36%), Gaps = 11/259 (4%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + +L L++L +F+ A + +I K+G + G+ TG F A G G+DVD Sbjct: 8 RRAAAPVLTLLVLTSAAFTAQAQTVAEIVKKGRVTIGVVTGAPPFGTTDATGKPAGYDVD 67 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 L + + +PL + R AL++ ++D L T R ++ + Sbjct: 68 VANLLGKYLGVP---VDIVPLTSPSRIPALEAGKVDFLVATLAPTPERARAIMFSAPYSA 124 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 + + +++L + V GTT + L + + FE Sbjct: 125 F--ELTIFAPVAAKYARLTELGKKKVGVTRGTTQDTALTRL---AVPGMNIVRFEDDATC 179 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A +++ +A + ++ R + S P + A+ + E ++ Sbjct: 180 AQALISNQVEAIALPNTT--GNEIMKARGAGKFDAKFAFSVQPNSMAVRRDAFELRQWLN 237 Query: 243 WTH-YAMVTAEELGITQKN 260 T Y + E I QK Sbjct: 238 TTISYVKLNGELDAIAQKW 256 >gi|317046638|ref|YP_004114286.1| family 3 extracellular solute-binding protein [Pantoea sp. At-9b] gi|316948255|gb|ADU67730.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b] Length = 279 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 46/277 (16%), Positives = 101/277 (36%), Gaps = 18/277 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59 M + + + L +L +S +A ++ +IK G LKC + + + F+ G Sbjct: 3 MKRRTTIGLALLPLLAISS--AHADLMANIKSSGELKCAVYSDVPPFSSPDPQTRQLAGM 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD C AL+ + K+ +P + + R + + + D+L N +T R + Sbjct: 61 DVDLCNALAKQMG---VKVTLVPTSVEARIAVIATGRADVLIANLAYTKTRGSQIQF--S 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + ++ +S G I GTT+E ++ H + F+ Sbjct: 116 DPYYVAKEMLLVKAPLADKPLSYFKGKRISATKGTTSEQSI------HLKGARAVTFQDT 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPS-EHVILPDIISKSPLAPAIIQGDTEWY 238 A ++ + + + + + ++ + ++ P+ + + + Sbjct: 170 ASAFLAVEQNKALGFVTNTMTGIKMITQAKKDGIDLAMIKEPMALEPIGVGMKRDEPALL 229 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 V+ AM ++ G K + T + R Sbjct: 230 TSVNSGLKAM---DDDGTIDKIWDTWIGPKTEYKMVR 263 >gi|158425494|ref|YP_001526786.1| putative amino acid ABC transporter periplasmic solute-binding protein [Azorhizobium caulinodans ORS 571] gi|158332383|dbj|BAF89868.1| putative amino acid ABC transporter periplasmic solute-binding protein [Azorhizobium caulinodans ORS 571] Length = 312 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 90/261 (34%), Gaps = 18/261 (6%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGD--------IKKRGFLKCGINTGLVGFAEVKAN 53 K ++ L+ F S++ A+ I +G L+ G+ + + Sbjct: 33 MKIVLKAVRVLLATGFVSWAVPAAQAATPMPSPPELITSQGVLRAGVRCDQPPYGFQDGS 92 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G + G + D R ++ IF K+++ + A+ R L K++D+L T R+ Sbjct: 93 GAFAGVETDMARQIADWIFGSKDKVEFTCVTAENRIPQLTGKRVDLLIATLGVTPERQRV 152 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + + + G ++ V+ L ++ + GT D Sbjct: 153 IDFSI--PYRWGASGLLVRADSPFQKVADLDHHTVVMPKGTVQAKWFEDMMP----GVKT 206 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + + A + R D Y D + L + +L D S ++ + + Sbjct: 207 LRLNTAADSLQALKQGRADGYAHDAATLVVAAAQDKS---LRLLNDPYQTSEVSIGLRKD 263 Query: 234 DTEWYNIVSWTHYAMVTAEEL 254 + W + + AE+L Sbjct: 264 EPTWKTYLDAAV-ERMHAEKL 283 >gi|118587811|ref|ZP_01545221.1| probable amino acid ABC transporter, substrate-binding protein [Stappia aggregata IAM 12614] gi|118439433|gb|EAV46064.1| probable amino acid ABC transporter, substrate-binding protein [Stappia aggregata IAM 12614] Length = 245 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 46/244 (18%), Positives = 102/244 (41%), Gaps = 11/244 (4%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 S ++ L DI + G +K F + + G+++G+D+D + ++ + + ++ Sbjct: 3 ASPASAELKDILEAGKIKIATPENFPPFGSLGSEGEYEGYDIDVAKMIAEDLGVE---LE 59 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ +K+R L++ + D++ R S+ + +F G +S+ Sbjct: 60 LVPVTSKQRIPFLETDKADLVIATLGANPERAKSIWFSHAYAPFFSGA--FAKPDVAVST 117 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + SG I V +GT +L + I F AAY + + D Sbjct: 118 IDDFSGKKIAVTSGTLEDLAITADAPE---DAEIIRFGDNAATIAAYVSGQADVIVTGN- 173 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS-WTHYAMVTAEELGITQ 258 + AL ++ND P ++ II+ SP + G+ + V+ + + + + +++ Sbjct: 174 -MVALGISNDNPDFNLENKFIIANSPSFIGVKTGNIDLLQWVNVFVLHKKLNGKLDELSK 232 Query: 259 KNIN 262 K + Sbjct: 233 KWLK 236 >gi|282901104|ref|ZP_06309036.1| extracellular solute-binding protein, family 3 [Cylindrospermopsis raciborskii CS-505] gi|281194003|gb|EFA68968.1| extracellular solute-binding protein, family 3 [Cylindrospermopsis raciborskii CS-505] Length = 267 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 42/236 (17%), Positives = 90/236 (38%), Gaps = 15/236 (6%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 + L+ L ++ A+ + +I++RG++ + A G+ +G ++D Sbjct: 14 TILLFSCVLLPLPGIINTSLAATMQEIQERGYITIAVKDNTPPLAFRDKQGNLQGLEIDL 73 Query: 64 CRALSSAIFDD------PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 + L+ + D ++++ P+ ER A+ + ++D+ T R ++ Sbjct: 74 AKRLARDLLGDSPSSRVKLQVKFQPVTNVERLPAVFNHKVDLAIARVTATPSRSR--IVS 131 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y+DG + K I +S L+ ICV ++T + + Sbjct: 132 LSIPYYYDGTAI-VTKNPAIQKLSDLNKRRICVLNYSSTIPHVKYAIPQG----ELVGVN 186 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 E + DA D + + S++ IL D +S PL+ + +G Sbjct: 187 SYLEAKKLLDNGQVDACAADSTVFQGWI--EPQYSQYKILLDRLSVEPLSIVMPKG 240 >gi|291288059|ref|YP_003504875.1| extracellular solute-binding protein family 3 [Denitrovibrio acetiphilus DSM 12809] gi|290885219|gb|ADD68919.1| extracellular solute-binding protein family 3 [Denitrovibrio acetiphilus DSM 12809] Length = 270 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 57/275 (20%), Positives = 100/275 (36%), Gaps = 23/275 (8%) Query: 2 YKDFFVSILCLIILFFTSFSTNAS-----ILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 K V++L + T+F+ + S L + KRG L+ G+ G + F G+ Sbjct: 1 MKKIVVTLLVFAMACVTAFANDNSLWEKSTLNQVLKRGELRVGMEAGYMPFELKNKKGEI 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFDVD + L+ + K+ + +L + + DI+ T R + + Sbjct: 61 IGFDVDMAKELAKEMG---VKLTLVNTAWDGIISSLLTDKYDIIMSGMTITPQRNLQVNF 117 Query: 117 AFRPITYFDGQGFIMHK--KKGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYH 172 A GQ ++ K I S L+ ++ + G T + Y Sbjct: 118 AD--PYIVVGQTILIRKELAGKIKSYKDLNDPKYTVATKLGVTGDYATKKYIGNA----K 171 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 +FE +E + DA+ D+ Y L + PLA AI + Sbjct: 172 INLFETEQEGAMEVVNGKADAFVYDLP--YNSLYFAQNSKNLAFLNVPFTYEPLAWAIRK 229 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 GD ++ N ++ V + G QK ++ Sbjct: 230 GDPDFMNFLNNIL---VQMKGDGRYQKIYDKWFGT 261 >gi|313124501|ref|YP_004034760.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312281064|gb|ADQ61783.1| Amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 276 Score = 153 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 57/270 (21%), Positives = 102/270 (37%), Gaps = 14/270 (5%) Query: 2 YKDFFVSILCLIILFFTSF------STNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 +K + L L T+ + IKKRG L G++ V + +G Sbjct: 4 FKRILLLGLVLSCFLTTACSNLTKEANQKDTWAKIKKRGSLVIGLDDTFVPMDFRQKDGQ 63 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G+DVD +A+ + K + ++ + L++ ID+L T R+ + Sbjct: 64 LVGYDVDLAKAVCKKLG---LKADFQTIDWSMKETELRNGTIDVLWNGYSVTSQRKKKVA 120 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + + Q ++ K GI S +Q+ G +I Q+G+T ++ L K K + Sbjct: 121 FSRS--YLRNRQVLVVKKSSGIKSFAQMKGQAIGAQSGSTAQIWLDGSQKVIKPKSKV-L 177 Query: 176 FERVEEIDAAYRAHRCDAYTGDISAL-YALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 ++ + A R D + Y +K D S VIL + + A + +GD Sbjct: 178 YDTIPSAFLDLNAGRIKGILLDETYAEYYIKHEADSKSYQVILNKEVPEDLFAVGMRKGD 237 Query: 235 TEWYNIVSWTHYAMVTAEEL-GITQKNINQ 263 ++ + L I QK Q Sbjct: 238 KNLKKKINQALAELQADGTLAKINQKWFGQ 267 >gi|170746458|ref|YP_001752718.1| extracellular solute-binding protein [Methylobacterium radiotolerans JCM 2831] gi|170652980|gb|ACB22035.1| extracellular solute-binding protein family 3 [Methylobacterium radiotolerans JCM 2831] Length = 302 Score = 153 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 37/258 (14%), Positives = 85/258 (32%), Gaps = 8/258 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + + L + S L I+ G + G F + N G+ Sbjct: 1 MSRTLPLLLATLCWAGLAAPSAAEGRLDKIRATGQISLGFPDASPPFGFLDQNAKPVGYS 60 Query: 61 VDFCRALSSA----IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 ++ C ++ + + +++++P+ + R + + ID+ L E + Sbjct: 61 LEICEHVAQKLKAVLGMNKLEVRHVPVMSATRIPLINNGTIDLECGTASN--LPERHKLV 118 Query: 117 AFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 +F P T+ + K + ++ G +I QAG T+ + + Sbjct: 119 SFAPTTFVAQVVLVAKKDTPVDVDDIASFRGKAISAQAGGETQRVATRINVRDKLDIQVM 178 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + E+ R D + +A RP+++ I + +P + D Sbjct: 179 PAKDTAEVFLLVETGRAAGAINDDALAHATVAGAKRPADYKIGTKGLEFAPYGILEPKDD 238 Query: 235 TEWYNIVSWTHYAMVTAE 252 + V ++ Sbjct: 239 AAFKAAVDKAVVELIQDG 256 >gi|91790186|ref|YP_551138.1| extracellular solute-binding protein [Polaromonas sp. JS666] gi|91699411|gb|ABE46240.1| amino acid ABC transporter substrate-binding protein, PAAT family [Polaromonas sp. JS666] Length = 303 Score = 153 bits (388), Expect = 3e-35, Method: Composition-based stats. Identities = 54/276 (19%), Positives = 105/276 (38%), Gaps = 11/276 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + VS+ + L S++ A L ++ L G +G + F+ + G G+ Sbjct: 1 MSRRI-VSLAVALFLCAGSWTVEADTLDKVRVSKALHLGHRSGSIPFSYLGNTGQPIGYA 59 Query: 61 VDFCR----ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +D C+ A++ I +I ++P+ ER AL ID+ ++ T + + Sbjct: 60 IDLCKHLAAAIAKEIRQPEMQIVWIPIGPNERNSALMDGLIDLDCGDSTVTA--QSQKVI 117 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 AF Y G ++ K I+ + LSG + + E L + +V Sbjct: 118 AFSIPIYLAGTRLLVPKAASIAEIGTLSGMKVVTTTQSGNEAMLRHVLGQTGVTADVVVA 177 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + A D + L+ ++ ++ LP S P A A + D Sbjct: 178 RTAKAATEVLTTGQAQALFADDATLFGIRNLTKDQAQFTTLPKTYSLRPKALAYRKDDER 237 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272 +V+ ++ + G+ Q+ Q ++ PD Sbjct: 238 LRTLVTREIKTLIAS---GLIQRAHEQWF-NSPLPD 269 >gi|254391810|ref|ZP_05007005.1| glutamate binding periplasmic protein [Streptomyces clavuligerus ATCC 27064] gi|294815492|ref|ZP_06774135.1| glutamate binding protein [Streptomyces clavuligerus ATCC 27064] gi|326443843|ref|ZP_08218577.1| glutamate binding periplasmic protein [Streptomyces clavuligerus ATCC 27064] gi|197705492|gb|EDY51304.1| glutamate binding periplasmic protein [Streptomyces clavuligerus ATCC 27064] gi|294328091|gb|EFG09734.1| glutamate binding protein [Streptomyces clavuligerus ATCC 27064] Length = 276 Score = 153 bits (388), Expect = 3e-35, Method: Composition-based stats. Identities = 39/262 (14%), Positives = 86/262 (32%), Gaps = 12/262 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 ++ + L T+ A + GI G G++ G DV Sbjct: 8 KASLAIATGLALSLTLTACGGGAGSDDS-----KIVIGIKFDQPGIGLKTPEGNFTGLDV 62 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D ++ + + I++ + +R +++ + ++ + R+ + A Sbjct: 63 DVATYVAKELGYEAKDIEWKQAPSADRETLIRNGDVKFVAASYTINDKRKAEVDFA--GP 120 Query: 122 TYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Q ++ I+ V L+ +C G+T+ + D + Sbjct: 121 YFLAHQDLLVRADDNSITKVEDLNKKKLCSVRGSTSAQNVKD---KRVPGADLQQYGGYS 177 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E DA T D + L + + +L +S+ P + +GD E + Sbjct: 178 ECLTGLENKAVDALTTDDAILAGYASQKEHQGKFKLLGLKLSEEPYGIGLKKGDKELRDK 237 Query: 241 VSWTHYAMVTAEELG-ITQKNI 261 ++ M + QKN+ Sbjct: 238 INKALEKMQKDDSWNKFVQKNL 259 >gi|240102149|ref|YP_002958457.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Thermococcus gammatolerans EJ3] gi|239909702|gb|ACS32593.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Thermococcus gammatolerans EJ3] Length = 257 Score = 153 bits (388), Expect = 3e-35, Method: Composition-based stats. Identities = 37/243 (15%), Positives = 86/243 (35%), Gaps = 14/243 (5%) Query: 12 LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSA 70 L++L + ++ + K L G + F G+ GFD++ + ++ Sbjct: 13 LLVLMLAAAVASSGCISGGSKEKVLVVGTSADFPPFEYKDPQTGNITGFDIELIKMVAKK 72 Query: 71 IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130 D K++ ++ ALQ+ ++D++ T R+ + + + Q + Sbjct: 73 AGYD--KVEIKDMDFDSLIPALQTGKVDVVIAGMTITEKRKQVVDFSI--PYWKADQAVV 128 Query: 131 MHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 + K I+ S+ L G I V+ GTT + + D + + A Sbjct: 129 VRKDSSITVSSLDDLKGKVIGVEKGTTGAIYIKDNL---GDQVTLKEYNSYVAALQALLN 185 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 + D D + ++ I + A+ +G+ E + ++ + Sbjct: 186 GQVDVLVIDSPV----ANMFTNKYDVKVVYTINTNEHYGIAVKKGNKELLDKINKALQDI 241 Query: 249 VTA 251 + + Sbjct: 242 MNS 244 >gi|325685426|gb|EGD27527.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 276 Score = 153 bits (388), Expect = 3e-35, Method: Composition-based stats. Identities = 57/270 (21%), Positives = 102/270 (37%), Gaps = 14/270 (5%) Query: 2 YKDFFVSILCLIILFFTSF------STNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 +K + L L T+ + IKKRG L G++ V + +G Sbjct: 4 FKRILLLGLVLSCFLTTACSNLTKEANQKDTWAKIKKRGSLVIGLDDTFVPMDFRQKDGQ 63 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G+DVD +A+ + K + ++ + L++ ID+L T R+ + Sbjct: 64 LVGYDVDLAKAVCKKLG---LKADFQTIDWSMKETELRNGTIDVLWNGYSVTSQRKKKVA 120 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + + Q ++ K GI S +Q+ G +I Q+G+T ++ L K K + Sbjct: 121 FSRS--YLRNRQILVVKKSSGIKSFAQMKGQAIGAQSGSTAQIWLDGSQKVIKPKSKV-L 177 Query: 176 FERVEEIDAAYRAHRCDAYTGDISAL-YALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 ++ + A R D + Y +K D S VIL + + A + +GD Sbjct: 178 YDTIPSAFLDLNAGRIKGILLDETYAEYYIKHEADSKSYQVILNKEVPEDLFAVGMRKGD 237 Query: 235 TEWYNIVSWTHYAMVTAEEL-GITQKNINQ 263 ++ + L I QK Q Sbjct: 238 KNLKKKINQALAELQADGTLAKINQKWFGQ 267 >gi|297199735|ref|ZP_06917132.1| sugar-binding protein [Streptomyces sviceus ATCC 29083] gi|297147474|gb|EDY57926.2| sugar-binding protein [Streptomyces sviceus ATCC 29083] Length = 350 Score = 153 bits (388), Expect = 3e-35, Method: Composition-based stats. Identities = 43/266 (16%), Positives = 86/266 (32%), Gaps = 18/266 (6%) Query: 17 FTSFSTNASILGDIKKR-G---FLKCGINTGLVGFAEVKANG----DWKGFDVDFCRALS 68 + S + + + IK R G L G++ + N D +GFD+D ++ Sbjct: 74 LSPSSADGTTIDKIKAREGAKRKLIVGVDQNSYRWGYRNPNSGPKADLEGFDIDLVHRIA 133 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 I DP +Q+ + +R A+Q ++D++ R R + + GQ Sbjct: 134 QDILGDPKAVQFKAIPTNQRIPAIQKGRVDMVVRTMTINCKRLADVAF--SAPYFKTGQQ 191 Query: 129 FIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE---EIDA 184 + K I L+ IC G+T L + +A + + V + Sbjct: 192 VLAPKSSDIKGYDGTLAHKKICTAEGSTAFSQLDEDKRAGKLVASADLRTTVPNQLDCLV 251 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + DA D + + + + + A+ + V+ Sbjct: 252 RLQLGEVDAVVTDGALAASQAAQDPT---VELKGSPFTTEYYGVAMKSDADDLVRRVNQV 308 Query: 245 HYAMVTAEELGITQKNINQVSKDTTN 270 G Q + ++ T + Sbjct: 309 LVDYRKDTTDG-WQASYDRWLSATLD 333 >gi|330984782|gb|EGH82885.1| cystine transporter subunit [Pseudomonas syringae pv. lachrymans str. M301315] Length = 265 Score = 153 bits (387), Expect = 4e-35, Method: Composition-based stats. Identities = 57/262 (21%), Positives = 95/262 (36%), Gaps = 12/262 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + F S L L+++ + A L IK G L G+ F+ V NG GF+ Sbjct: 7 RRTFLFSALSLMLVTGIAGQAMAGEQLQKIKDSGTLNVGLEGTYPPFSFVDENGKLTGFE 66 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F AL+ + K + P AL SK++D++ + R+ + P Sbjct: 67 VEFSEALAKELG---VKAKIQPSKWDGILAALDSKRLDVVINQVTISEERKKKYDFSE-P 122 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 T Q ++ K I + L+G + V GT E L + +K ++ Sbjct: 123 YTVSGIQALVLKKNADTIKTAKDLTGKKVGVGLGTNYEQWLKENVPGAIVK----TYDDD 178 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 R DA D L AL++ ++ V D S+ A+ +G+ E Sbjct: 179 PSKIQDLSVGRIDAILVDR--LAALEMATKTKNKLVPAGDAFSRQESGIALRKGEPELQA 236 Query: 240 IVSWTHYAMVTAEELGITQKNI 261 + + L K Sbjct: 237 AIDKAIDKLRADGTLEKLSKKY 258 >gi|83747889|ref|ZP_00944921.1| ABC transporter amino acid-binding protein [Ralstonia solanacearum UW551] gi|207739279|ref|YP_002257672.1| amino-acid-binding periplasmic protein [Ralstonia solanacearum IPO1609] gi|83725422|gb|EAP72568.1| ABC transporter amino acid-binding protein [Ralstonia solanacearum UW551] gi|206592652|emb|CAQ59558.1| amino-acid-binding periplasmic protein [Ralstonia solanacearum IPO1609] Length = 280 Score = 153 bits (387), Expect = 4e-35, Method: Composition-based stats. Identities = 50/263 (19%), Positives = 95/263 (36%), Gaps = 15/263 (5%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRAL 67 + L L SF A +I+K L+CG + FA + GFDVD C AL Sbjct: 10 LTVLACLCAASFPVLADQWAEIQKNKELRCGTFADVPPFAAPDQKTREMVGFDVDMCNAL 69 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + + PL+ + R ++ ++D+ N +TL R + Y + Sbjct: 70 AKRMGVTA---KITPLSVEARVPEVKMGRVDVTVANLAYTLGRAEQIQF--SDPYYLAKE 124 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 + S + G + G+T+EL++ P+ F+ A + Sbjct: 125 MLAVRASDPGKSKADYKGKRLASAKGSTSELSIKMN------GSEPVTFQDTGSAYMAVQ 178 Query: 188 AHRCDAYTGDISALYALKLTNDRPS-EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + + + L + E ++ + + P+ + +G+ + V+ Sbjct: 179 QGKALGIVSNTMTITKLVNQSKTSGIELKVIAEPMIYQPIGVGMKKGEPQLLAKVNEALL 238 Query: 247 AMVTAEELGITQKNINQVSKDTT 269 AM A E I Q + +T Sbjct: 239 AMDKAGE--INQLWNKWLGPNTE 259 >gi|157363346|ref|YP_001470113.1| extracellular solute-binding protein [Thermotoga lettingae TMO] gi|157313950|gb|ABV33049.1| extracellular solute-binding protein family 3 [Thermotoga lettingae TMO] Length = 252 Score = 153 bits (387), Expect = 4e-35, Method: Composition-based stats. Identities = 64/259 (24%), Positives = 106/259 (40%), Gaps = 24/259 (9%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + FFV IL + L FT AS++ DI+KRG L+ G + G + G+ G +V Sbjct: 1 MRRFFV-ILIVTALLFTGL---ASLIDDIQKRGVLRVGQDEGYMPLYGTDEKGERVGLEV 56 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + ++ + K++Y+ +N AL S + DI+ T R +L + F Sbjct: 57 ELINKIAEILG---VKVEYVIVNWDGIIPALISGKFDIIFSGMTITPER--ALKVNFSAP 111 Query: 122 TYFDGQGFIMHKK--KGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 GQ + +K K + L+ I VQ GTT E T F + F Sbjct: 112 YLTVGQAILYNKSVFKTPPTYQDLADKPVKIAVQLGTTGEFTARRKFPKA----EILTFS 167 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE- 236 ++E + R D D +K + + +++S+ L AI +GD E Sbjct: 168 TMDEAAFQVVSKRADIMVNDS---IYVKFLTQKYETLGMTNELLSREDLGIAIRKGDMEA 224 Query: 237 --WYN-IVSWTHYAMVTAE 252 W++ V W + + E Sbjct: 225 LRWFDTFVQWAKTSGLIEE 243 >gi|38234609|ref|NP_940376.1| ABC transporter [Corynebacterium diphtheriae NCTC 13129] gi|38200873|emb|CAE50578.1| Putative ABC transpoter membrane protein [Corynebacterium diphtheriae] Length = 315 Score = 153 bits (387), Expect = 4e-35, Method: Composition-based stats. Identities = 51/260 (19%), Positives = 95/260 (36%), Gaps = 13/260 (5%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 S N + +++RG+L GI+ + +G+ KGF+VD R ++ IF +P Sbjct: 57 LLGSLRPNGDDVPQVRQRGYLIVGIDQSQNLLSFRDTDGELKGFEVDLAREVARDIFGEP 116 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 KI + +++ AL+ Q+D++ R+ T RE + F + + K Sbjct: 117 -KIDFRYVDSSSWVKALEDGQVDMVLRSISVT--RERQDQVFFSTPYFSGKTRILTQKDS 173 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I + L G ++CV +T L + + A + + DA Sbjct: 174 DIHGAADLKG-TVCVTNLSTGSKRLGAIAP----NSTMLAVRNSADCLLALQQNHADAVI 228 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT--EWYNIVSWTHYAMVTAEE 253 D + L + + I+ D I+ A A + T + ++ + Sbjct: 229 SDDAILSGMIAQDP---FTHIVGDPIATEQYAVAFAKPRTGRDTAPMIRQVNSTFERIFR 285 Query: 254 LGITQKNINQVSKDTTNPDV 273 G + N P V Sbjct: 286 DGTWTRTYNHWFGAYLAPQV 305 >gi|148273187|ref|YP_001222748.1| putative glutamate ABC transporter substrate-binding protein [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147831117|emb|CAN02069.1| putative glutamate ABC transporter, substrate-binding protein [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 307 Score = 153 bits (387), Expect = 4e-35, Method: Composition-based stats. Identities = 41/256 (16%), Positives = 83/256 (32%), Gaps = 9/256 (3%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 + + + G +K G F +G GFDV ++S + I++ Sbjct: 59 EGTTMARLAAAGEMKVGTKYDQPLFGLAGLDGKPAGFDVAIAALVASKMGIPFDSIKFTE 118 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM-HKKKGISSVS 141 + R +Q+ +D + R+ + A Y GQ ++ I++ Sbjct: 119 TVSANREPFIQNGSVDAVVATYTINDKRKEVVDFA--GPYYVAGQALMVLADDTTINTPE 176 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 + G +C AG+T + F A + + + R + A T D L Sbjct: 177 DVRGKQVCSVAGSTPAANIEATFGA-----VVVPTDVYSKCLDPLRNGQVSAVTTDNVIL 231 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQKN 260 N+ + V + ++ P I + D + ++ T + + Sbjct: 232 SGFIDQNEGEFKLVGDGETFTQEPYGIGIAKDDEAFRTFINDTLQEAYDDGTWARLFEAT 291 Query: 261 INQVSKDTTNPDVQRF 276 V P + R+ Sbjct: 292 AGTVIDTPEPPAIDRY 307 >gi|119945248|ref|YP_942928.1| ABC transporter extracellular solute-binding protein [Psychromonas ingrahamii 37] gi|119863852|gb|ABM03329.1| ABC transporter extracellular solute-binding protein, family 3 [Psychromonas ingrahamii 37] Length = 275 Score = 153 bits (386), Expect = 4e-35, Method: Composition-based stats. Identities = 49/245 (20%), Positives = 91/245 (37%), Gaps = 9/245 (3%) Query: 1 MYKDFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M +S++ + +FS +A L D+ G L CG+ N GF Sbjct: 1 MKLVKKISLVVASMAAIGAFSTASADKLDDVINSGTLNCGVVLDFPPMGYTDKNNQPAGF 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD+C L+ + K + L +R +L S + D++ +T TL R S+G Sbjct: 61 DVDYCNDLAKVLG---VKSNVINLTWGDRIPSLISAKTDVVVGSTSDTLARAKSVGF--T 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFER 178 + + K ++S L + GTT E Y + + F+ Sbjct: 116 YPYFVFKFQVLSKKGVKMTSFDDLKNVKVGAALGTTYEKEYFAYADDKGWGRDNYTSFKS 175 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-SPLAPAIIQGDTEW 237 + + DA + + A KLT+ + V P + + + + + + W Sbjct: 176 ENDAFLGLHQGKIDALISTNTNI-ATKLTSGQFDNFVAGPYVPNYDDVVGLIVKRSELAW 234 Query: 238 YNIVS 242 + ++ Sbjct: 235 KSYLN 239 >gi|300697547|ref|YP_003748208.1| amino-acid-binding periplasmic abc transporter protein [Ralstonia solanacearum CFBP2957] gi|299074271|emb|CBJ53816.1| putative amino-acid-binding periplasmic abc transporter protein [Ralstonia solanacearum CFBP2957] Length = 280 Score = 153 bits (386), Expect = 4e-35, Method: Composition-based stats. Identities = 50/263 (19%), Positives = 95/263 (36%), Gaps = 15/263 (5%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRAL 67 + L L SF A +I+K L+CG + FA + GFDVD C AL Sbjct: 10 LTVLACLCSASFPVLADQWAEIQKNKELRCGTFADVPPFAAPDPKTREMVGFDVDMCNAL 69 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + + PL+ + R ++ ++D+ N +TL R + Y + Sbjct: 70 AKRMGVTA---KITPLSVEARVPEVKMGRVDVTVANLAYTLSRAEQIQF--SDPYYLAKE 124 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 + S + G + G+T+EL++ P+ F+ A + Sbjct: 125 MLAVRASDPGKSKADYKGKRLASAKGSTSELSIKMN------GSEPVTFQDTGSAYMAVQ 178 Query: 188 AHRCDAYTGDISALYALKLTNDRPS-EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + + + L + E ++ + + P+ + +G+ + V+ Sbjct: 179 QGKALGIVSNTMTITKLVNQSKTGGIELKVIAEPMIYQPIGVGMKKGEPQLLAKVNEALL 238 Query: 247 AMVTAEELGITQKNINQVSKDTT 269 AM A E I Q + +T Sbjct: 239 AMDKAGE--INQLWNKWLGPNTE 259 >gi|304385261|ref|ZP_07367606.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Pediococcus acidilactici DSM 20284] gi|304328468|gb|EFL95689.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Pediococcus acidilactici DSM 20284] Length = 272 Score = 153 bits (386), Expect = 4e-35, Method: Composition-based stats. Identities = 47/275 (17%), Positives = 98/275 (35%), Gaps = 19/275 (6%) Query: 1 MYK----DFFVSILCLIILFFTSFSTNA------SILGDIKKRGFLKCGINTGLVGFAEV 50 M K V L+I A S I+ + + G++ V Sbjct: 1 MKKLVKFSLLVMACALLIPGLAGCGKTAQNNPQPSSWKSIQAKHHVVIGLDDSFVPMGFR 60 Query: 51 KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 + NG G+D+D RA+ K+ + ++ L+++ +D++ T R Sbjct: 61 QKNGKLAGYDIDLARAVFKQYG---IKVDFQTIDWSMNVTELRNQTVDLIWNGLTITDER 117 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY---FKAH 167 + ++ + + Q ++ K + I S ++G ++ VQ+G++ + Y K Sbjct: 118 QRAMTFSE--PYLVNQQVLVVKKSQHIHSPQDMTGKTLGVQSGSSGAQDIDRYPKLLKQR 175 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 K+ P++++ +A R D P ++ ++ + A Sbjct: 176 IKKHTPVLYDTFNNAFIDLKADRIQGLLIDSVYANYYLQHLPNPGDYRVIKSGMPNEYFA 235 Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNI 261 I +G+ E + + EL I QK Sbjct: 236 VGIKKGNQEVKQKIDQGIEHLRKTGELQRINQKWF 270 >gi|209518146|ref|ZP_03266975.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] gi|209501450|gb|EEA01477.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] Length = 266 Score = 153 bits (386), Expect = 5e-35, Method: Composition-based stats. Identities = 54/271 (19%), Positives = 96/271 (35%), Gaps = 15/271 (5%) Query: 4 DFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + L L L FT+ + +A +L +K+ G LK G+ F +G+ +GFDVD Sbjct: 5 KLLIGALALFALGFTAVAAHAEDLLDSVKQAGVLKIGLEGTYPPFDSRNKDGELEGFDVD 64 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 +A+++ + P +++P ALQS + D++ T R+ L + P T Sbjct: 65 VAKAVAAKLGVKP---EFIPTEWSGIIAALQSGKFDVIINQVTITPQRKQVLDFSQ-PYT 120 Query: 123 YFDGQGFI-MHKKKGISSVSQLSG-ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y Q K+ S+ + G + V GT D + + Sbjct: 121 YSAAQLIQRADDKREFKSLDEFKGDKKLGVTLGTNY-----DQMARAVPGINVQTYPGAP 175 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E A R DA D L + + P + + + + + ++ Sbjct: 176 EKLRDLAAKRIDATIDDRLMLPYIIKNSQLPLRTGAVLKGADQE-MGIPFRKDNPKFAKA 234 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + M L ++ D T P Sbjct: 235 LDDALTQMKQDGTLKKIS--MHWFGTDVTQP 263 >gi|254411623|ref|ZP_05025399.1| Bacterial extracellular solute-binding protein, family 3 [Microcoleus chthonoplastes PCC 7420] gi|196181345|gb|EDX76333.1| Bacterial extracellular solute-binding protein, family 3 [Microcoleus chthonoplastes PCC 7420] Length = 260 Score = 153 bits (386), Expect = 5e-35, Method: Composition-based stats. Identities = 47/244 (19%), Positives = 89/244 (36%), Gaps = 12/244 (4%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V + + + S + L +I++RG L + L A G +G ++D R Sbjct: 11 VVLGLMGVAVLQPPSAYPAELAEIEQRGQLIVAVKDNLRPLGFRDATGSLQGLEIDIARR 70 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + P + P+ ++R + Q+DI T R + + Y DG Sbjct: 71 LAKELLGSPEAVVLQPVANRDRLSVVVEDQVDIAIARVTVTDSRARLVDFSI--PYYLDG 128 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 G I + I+ +S L +I V G++T + + + +E Sbjct: 129 AGIITNDAS-INLLSDLDNQTIAVIKGSSTIPVIKYALPNAQ----LVGVDSYQEALFLL 183 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ--GDTEWYNIVSWT 244 A +A+ D + L ++ +LP +S + LA + + TE V+ Sbjct: 184 EAGEANAFAADQTVLTGWVQQYP---DYRLLPYRLSGAALAIVMPKGLQYTELRQQVNQA 240 Query: 245 HYAM 248 Sbjct: 241 IERW 244 >gi|292487346|ref|YP_003530218.1| putative ABC transporter periplasmic protein [Erwinia amylovora CFBP1430] gi|292898591|ref|YP_003537960.1| ABC transporter substrate-binding protein [Erwinia amylovora ATCC 49946] gi|291198439|emb|CBJ45547.1| ABC transporter, substrate-binding protein [Erwinia amylovora ATCC 49946] gi|291552765|emb|CBA19810.1| putative ABC transport system, periplasmic component [Erwinia amylovora CFBP1430] gi|312171452|emb|CBX79710.1| putative ABC transport system, periplasmic component [Erwinia amylovora ATCC BAA-2158] Length = 261 Score = 153 bits (386), Expect = 5e-35, Method: Composition-based stats. Identities = 51/287 (17%), Positives = 105/287 (36%), Gaps = 26/287 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L +LF A L D++KRG L+ + F V + +G+D Sbjct: 1 MKKGL-STLLAAALLFSQISVVQADQLQDVEKRGVLRVAVPQDFPPFGSVGTDLQPQGYD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D L+ + K+Q +P+ + R LQ+ ++D++ + RE + + Sbjct: 60 IDMATYLAKQM---KLKLQLVPVTSANRVPYLQTGKVDLVISSLGKNPEREKVIDFSRAY 116 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +F G K + + LSG S+ V G ++ L +E Sbjct: 117 APFF--LGVFGAKPGALKDAAGLSGKSVGVTRGAVEDMVLTSVAPK---DAQVKRYEDNN 171 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +AY + + + A+ + + ++ SP + +G+ Sbjct: 172 TTLSAYLSGQVQYVATGNLVVAAIARQQADKA--PVAQFMLKDSPCFIGMKKGEPALKAK 229 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGE 287 V E + K +N++++ R+L +++G Sbjct: 230 VDALI-------EQALKDKTLNRLAE--------RWLKAPLPADLGA 261 >gi|331007421|ref|ZP_08330602.1| putative binding protein component of ABC transporter [gamma proteobacterium IMCC1989] gi|330418771|gb|EGG93256.1| putative binding protein component of ABC transporter [gamma proteobacterium IMCC1989] Length = 274 Score = 153 bits (386), Expect = 5e-35, Method: Composition-based stats. Identities = 55/276 (19%), Positives = 101/276 (36%), Gaps = 12/276 (4%) Query: 1 MYKDFFV-SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M +FF ++L S + A L D+ +G ++CG+ +N + G Sbjct: 1 MKSNFFKKALLAASFGLLASGNVAADKLDDVLSKGKVRCGVVLDFPPMGFRDSNNNPVGM 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD C L+ A+ + + + L ER +L S ++D+ ++ TL R ++G Sbjct: 61 DVDMCADLAKAM---NIEYEIVGLTWAERIPSLISGKVDVAIASSSDTLERAQTVGFTI- 116 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH--NMKYHPIVFE 177 P F Q + K +S L ++ GTT E Y K + K F+ Sbjct: 117 PYMVFQFQALLS-DKSEAASWEDLKDLNVGSAVGTTYESEFLKYKKENWEGAKGKYSSFQ 175 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E A + +A +A + + + + ++ + W Sbjct: 176 SENESFLAVSQGQVNAVIVTDTAAANVISSGKFKGVKLGPVAPFGADIVGMMTLRKEFGW 235 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 N ++ V + G Q+ + T PD+ Sbjct: 236 INYLNLYINRQVRS---GRFQELYGKWIGGTA-PDM 267 >gi|91781298|ref|YP_556505.1| polar amino acid ABC transporter periplasmic ligand-binding protein [Burkholderia xenovorans LB400] gi|91693958|gb|ABE37155.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia xenovorans LB400] Length = 267 Score = 153 bits (386), Expect = 5e-35, Method: Composition-based stats. Identities = 56/275 (20%), Positives = 102/275 (37%), Gaps = 17/275 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + K ++ L L + FT+ + +A +L +K+ G L+ G+ F ++G +GF Sbjct: 3 LSKRLLINALALSAVGFTAVAAHAEDLLDTVKQAGVLRIGLEGTYPPFDYRNSDGQLEGF 62 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD +A+++ + P Q++P ALQS + D++ T R+ L + Sbjct: 63 DVDVAKAVATKLGVKP---QFIPTEWSGIIAALQSGKFDVIVNQVTITPQRKQVLDFSQ- 118 Query: 120 PITYFDGQGFI-MHKKKGISSVSQLSG-ASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 P TY Q K+ S+ + G + V GT D + + Sbjct: 119 PYTYSAAQLIQRTDDKREFRSLDEFKGDKKLGVTLGTNY-----DQMARAVPGINVQTYP 173 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE-HVILPDIISKSPLAPAIIQGDTE 236 E + A R DA D L + T+ P +L + + Q + + Sbjct: 174 GAPEKLSDLAAKRIDATIDDRLMLPYIIKTSQLPLRPGAVLKG--ADQDMGIPFRQNNPK 231 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + + + L ++ D T P Sbjct: 232 FAKALDDALTGLKQDGTLKKIS--VHWFGTDVTQP 264 >gi|300693657|ref|YP_003749630.1| amino-acid-binding periplasmic ABC transporter protein [Ralstonia solanacearum PSI07] gi|299075694|emb|CBJ34991.1| putative amino-acid-binding periplasmic abc transporter protein [Ralstonia solanacearum PSI07] Length = 280 Score = 153 bits (386), Expect = 5e-35, Method: Composition-based stats. Identities = 49/263 (18%), Positives = 96/263 (36%), Gaps = 15/263 (5%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRAL 67 + L L S A +I+K L+CG + FA + GFDVD C+AL Sbjct: 10 LTVLACLCAASLPALADQWAEIQKNKELRCGTFADVPPFAAPDPKTREMVGFDVDMCQAL 69 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + + PL+ + R ++ ++D+ N +TL R + Y + Sbjct: 70 AKRLG---VAAKITPLSVEARVPEVKMGRVDVTVANLAYTLGRAEQIQF--SDPYYLAKE 124 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 + +S + G + G+T+EL++ P+ F+ A + Sbjct: 125 MLAVKASDPGTSKADYKGKRLAAAKGSTSELSIKMN------GSEPVTFQDTGSAYMAVQ 178 Query: 188 AHRCDAYTGDISALYALKLTNDRPS-EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + + + L + E ++ + + P+ + +G+ + V+ Sbjct: 179 QGKALGIVSNTMTITKLVNQSKSGGIELKMIAEPMIYQPIGVGMKKGEPQLLAKVNEALL 238 Query: 247 AMVTAEELGITQKNINQVSKDTT 269 AM A E I Q + +T Sbjct: 239 AMDKAGE--INQLWNKWLGPNTE 259 >gi|66043627|ref|YP_233468.1| cystine transporter subunit [Pseudomonas syringae pv. syringae B728a] gi|63254334|gb|AAY35430.1| extracellular solute-binding protein, family 3 [Pseudomonas syringae pv. syringae B728a] Length = 265 Score = 153 bits (386), Expect = 5e-35, Method: Composition-based stats. Identities = 55/262 (20%), Positives = 95/262 (36%), Gaps = 12/262 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + F S + L++ + A L IK G L G+ F+ V +G GF+ Sbjct: 7 RRTFLFSAMGLMLSAGIAGQAMAGEQLQKIKDSGTLNVGLEGTYPPFSFVDESGKLTGFE 66 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F AL+ + K + P AL SK++D++ + R+ + P Sbjct: 67 VEFSEALAKELG---VKAKIQPSKWDGILAALDSKRLDVVINQVTISDERKKKYDFSE-P 122 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 T Q ++ K I SV LSG + V GT ++ KA+ ++ Sbjct: 123 YTISGIQALVLKKNADTIKSVKDLSGKKVGVGLGT----NYEEWLKANVPDAIVKTYDDD 178 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 R DA D L AL++ ++ V + S+ A+ +G+ E Sbjct: 179 PSKIQDLSVGRIDAILVDR--LAALEMAAKTKNKLVPAGEAFSRQASGIALRKGEPELLA 236 Query: 240 IVSWTHYAMVTAEELGITQKNI 261 + + L + Sbjct: 237 AIDKAIDKLRADGTLKKLSEKY 258 >gi|222106267|ref|YP_002547058.1| ABC transporter substrate binding protein (amino acid) [Agrobacterium vitis S4] gi|221737446|gb|ACM38342.1| ABC transporter substrate binding protein (amino acid) [Agrobacterium vitis S4] Length = 278 Score = 152 bits (385), Expect = 5e-35, Method: Composition-based stats. Identities = 62/292 (21%), Positives = 103/292 (35%), Gaps = 26/292 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK-GF 59 M K F +L L L T S +A L IK RG L G+ F + + GF Sbjct: 6 MTKTIFGFVLSLSALVATQASADA-TLDRIKGRGKLTVGVILSGAPFGYIDPKSQEQKGF 64 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 +VD +AL+ + K++ + + R LQ ++DIL N +T R L Sbjct: 65 NVDIAQALADDLG---VKLETVTVTPPNRVQFLQQGKVDILIANMQYTEDRAKVLDFVPT 121 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 P G ++ K G+ + L G +CV G+ L + + A Sbjct: 122 PYD-RSGGAAVVRKDSGLKDWADLKGKPVCVSQGSNYTQPLIEEYGA-----VVKALPSQ 175 Query: 180 EEIDAAYRAHRCDAYTG-DISALYALKLTNDRPSEHVI-LPDIISKSPLAPAIIQGDTEW 237 E A + C A + L+ + ++ I P + S + +G+ + Sbjct: 176 PESLLALQGGNCVAAVHVGATVGLLLQDRPEEWKDYAIPFPTELVPSDSVIWLRKGEADT 235 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEAL 289 + + + +L K+ R L ID +AL Sbjct: 236 QTALDNAVKKLHVSGKLLDFAKS-------------SRLLNIDYLEQEHKAL 274 >gi|170781632|ref|YP_001709964.1| putative glutamate/aspartate-binding transport protein [Clavibacter michiganensis subsp. sepedonicus] gi|169156200|emb|CAQ01342.1| putative glutamate/aspartate-binding transport protein [Clavibacter michiganensis subsp. sepedonicus] Length = 330 Score = 152 bits (385), Expect = 6e-35, Method: Composition-based stats. Identities = 43/256 (16%), Positives = 84/256 (32%), Gaps = 9/256 (3%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 + + + G +K G F +G GFDV ++S + I + Sbjct: 82 EGTTMARLAAAGEMKVGTKYDQPLFGLAGLDGKPAGFDVAIAALIASKMGIPFDGITFTE 141 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM-HKKKGISSVS 141 + R +Q+ +D + R+ +G A Y GQ ++ I++ Sbjct: 142 TVSANREPFIQNGSVDAVVATYTINDKRKEVVGFA--GPYYVAGQALMVLADDTTINTPE 199 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 + G +C AG+T + F A + + + R + A T D L Sbjct: 200 DVRGKQVCSVAGSTPAANIEATFGA-----VVVPTDVYSKCLDPLRNGQVSAVTTDNVIL 254 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQKN 260 N+ + V + ++ P I +GD + ++ T + + Sbjct: 255 SGFIDQNEGEFKLVGGGETFTQEPYGIGIAKGDEAFRTFINDTLQEAYDDGTWARLFEAT 314 Query: 261 INQVSKDTTNPDVQRF 276 V P + R+ Sbjct: 315 AGTVIDTPEPPAIDRY 330 >gi|186477008|ref|YP_001858478.1| extracellular solute-binding protein [Burkholderia phymatum STM815] gi|184193467|gb|ACC71432.1| extracellular solute-binding protein family 3 [Burkholderia phymatum STM815] Length = 266 Score = 152 bits (385), Expect = 6e-35, Method: Composition-based stats. Identities = 44/232 (18%), Positives = 82/232 (35%), Gaps = 11/232 (4%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 +I K G LK + F V + +G+D+D L+ ++ K++ +P+N+ Sbjct: 35 DNITKSGVLKVAVPEDYPPFGSVGPDLKPQGYDIDTAALLAKSM---NVKLELVPVNSAN 91 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 R LQ+ ++D++ + T RE + + Y+ QG +SS + L+G + Sbjct: 92 RIPYLQTNKVDLVISSLGKTAEREKVIDFSSAYAPYY--QGVFGPADLKVSSPADLTGKT 149 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 + G E+ L +K FE AA+ + + A+ Sbjct: 150 VGATRGALEEIALTQMAPNATIK----RFEDNNATIAAFLSGQVQLIAAGNIVAAAILA- 204 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 P +I SP + + + V L K Sbjct: 205 -KNPPRRPEPKFVIKNSPCFVGLNKNEPRLQQKVDAAIAQAKRDGTLNTMSK 255 >gi|309777346|ref|ZP_07672307.1| amino acid ABC transporter, amino acid-binding protein [Erysipelotrichaceae bacterium 3_1_53] gi|308914887|gb|EFP60666.1| amino acid ABC transporter, amino acid-binding protein [Erysipelotrichaceae bacterium 3_1_53] Length = 256 Score = 152 bits (385), Expect = 6e-35, Method: Composition-based stats. Identities = 49/249 (19%), Positives = 92/249 (36%), Gaps = 11/249 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + L L T+ ++A D K+ L GI+ K +G GFD Sbjct: 1 MKRIVMTMLALLCTLSLTACGSDAGKGDD-KE--VLTIGIDDTFAPMGF-KKDGKLVGFD 56 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ A+S I +++ ++ + L+S ID++ T R+ + Sbjct: 57 VELAEAVSKKIGKS---VEFQNIDWDLKETELESGNIDLIWNGYSITDERKKQVLF--SD 111 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT-ELTLADY-FKAHNMKYHPIVFER 178 + Q I K GI + + + G ++ VQ ++ + + D F A P F+ Sbjct: 112 PYMENRQLIITTDKTGIKAKTDIKGKTLSVQKNSSAYDAVMKDKDFVADLKGGKPTQFDT 171 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + + R DA D + D ++V+L + A + + DTE Sbjct: 172 NNDCFMDLESGRSDAIVVDETLARYYMKQQDNGVKYVVLDENFGTEEYAIGMRKDDTELC 231 Query: 239 NIVSWTHYA 247 ++ Sbjct: 232 KEINKAMQE 240 >gi|163791792|ref|ZP_02186170.1| hypothetical protein CAT7_03744 [Carnobacterium sp. AT7] gi|159872938|gb|EDP67064.1| hypothetical protein CAT7_03744 [Carnobacterium sp. AT7] Length = 260 Score = 152 bits (385), Expect = 6e-35, Method: Composition-based stats. Identities = 42/255 (16%), Positives = 88/255 (34%), Gaps = 9/255 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + I+ + T IK+ G L G++ +NGD GFD Sbjct: 5 MTKVVLGLGMVGILAGCGAEETAKDSFDQIKEEGTLVVGLDDTFAPMGFRDSNGDIVGFD 64 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD ++ + ++++ ++ + L+S ID++ T R+ + Sbjct: 65 VDLANVVAEKL---DVEVEFQAIDWALKETELKSDNIDVIWNGYTITDERKKQVDF--SS 119 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY---HPIVFE 177 + Q I+ + I + LSG + Q ++ + K+ +++ Sbjct: 120 PYLENSQIIIVLEDSDIQTKEDLSGKVVAAQQSSSAVDAINADESKIIEKFANQEVVLYP 179 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 ++ + R DA D + N+ S + +L + A + D + Sbjct: 180 SNNDVFNDLASGRSDAIVVDETLGRYYMKQNEEIS-YRVLEGNFGEEEYAVGTRKEDDKL 238 Query: 238 YNIVSWTHYAMVTAE 252 ++ M T Sbjct: 239 TEAINDALDEMKTDG 253 >gi|187927127|ref|YP_001897614.1| family 3 extracellular solute-binding protein [Ralstonia pickettii 12J] gi|309780170|ref|ZP_07674921.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Ralstonia sp. 5_7_47FAA] gi|187724017|gb|ACD25182.1| extracellular solute-binding protein family 3 [Ralstonia pickettii 12J] gi|308920873|gb|EFP66519.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Ralstonia sp. 5_7_47FAA] Length = 275 Score = 152 bits (385), Expect = 6e-35, Method: Composition-based stats. Identities = 37/245 (15%), Positives = 82/245 (33%), Gaps = 10/245 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 +A L +I+K G ++ I F + + +G+D+D ++ + Sbjct: 31 LLPGRPAHADALANIQKAGVIRVAIPNDFPPFGSLGPDLKLQGYDIDMAGLIAKELG--- 87 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 K + +P+ + R L + ++D++ + R + + K Sbjct: 88 VKAELVPVTSTNRIPFLTTGKVDVVISSLGKNAERAKVIDFTQAYAPFPKS--VYGPKDV 145 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I + L+G +I V G+T +L L+ A +E +Y + T Sbjct: 146 SIKGPADLAGKTIGVTRGSTEDLALSAVAPA---SATIKRYEDNNATAQSYLIGQVQLVT 202 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 A + + L + +P + +G+ + V+ + T L Sbjct: 203 VGNIV--ANAVNERTKLRQLDLKFPVEDTPCYVGVAKGEPALLDKVNTVITKLKTDGRLN 260 Query: 256 ITQKN 260 + Sbjct: 261 DLSQR 265 >gi|241661636|ref|YP_002979996.1| family 3 extracellular solute-binding protein [Ralstonia pickettii 12D] gi|240863663|gb|ACS61324.1| extracellular solute-binding protein family 3 [Ralstonia pickettii 12D] Length = 275 Score = 152 bits (385), Expect = 6e-35, Method: Composition-based stats. Identities = 37/245 (15%), Positives = 83/245 (33%), Gaps = 10/245 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 +A L +I+K G ++ I F + + +G+D+D ++ + Sbjct: 31 LLPGRPAHADALANIQKAGVIRVAIPNDFPPFGSLGPDLKLQGYDIDMANLVAKELG--- 87 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 K + +P+ + R L + ++D++ + R + + K Sbjct: 88 VKAELVPVTSTNRIPFLTTGKVDVVISSLGKNAERAKVIDFTQAYAPFPKS--VYGPKDV 145 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I + + L+G +I V G+T +L L+ A +E +Y + T Sbjct: 146 SIKAPADLAGKTIGVTRGSTEDLALSAVAPA---SATIKRYEDNNATAQSYLIGQVQLVT 202 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 A + + L + +P + +G+ + V+ + T L Sbjct: 203 VGNIV--ANAVNERTKLRQLDLKFPVEDTPCYVGVAKGEPALLDKVNAVITKLKTDGRLN 260 Query: 256 ITQKN 260 + Sbjct: 261 DLSQR 265 >gi|153939947|ref|YP_001389817.1| polar amino acid ABC transporter amino acid-binding protein [Clostridium botulinum F str. Langeland] gi|152935843|gb|ABS41341.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum F str. Langeland] gi|295317904|gb|ADF98281.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum F str. 230613] Length = 267 Score = 152 bits (385), Expect = 6e-35, Method: Composition-based stats. Identities = 43/265 (16%), Positives = 94/265 (35%), Gaps = 12/265 (4%) Query: 2 YKDFFVSILCLIILFFTSF----STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 K+ SIL + ++F + S + L DI +G G++ G+ Sbjct: 3 KKNILFSILIMGLIFMLTGCDNKSKEDTSLKDINAKGEFVVGLDDSFPPMGFKNDKGEIV 62 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D + ++ + K+ + P+ L+L +K ID++ T R+ + Sbjct: 63 GFDIDLAKEVAKKMG---VKVVFKPVQWDGVVLSLNNKDIDVIWNGLTITEKRKEQINF- 118 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + Q +++ I S L+ ++ +Q G+++E+ L + Sbjct: 119 -SKPYVENKQIIVVNNDSNIKSKKDLNKKTVAIQLGSSSEVALDSDKDFVKSLKELKKYS 177 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E +A R D + + + +P+ +L + + D + Sbjct: 178 NNTEALMDLQAKRVD--AVVVDEVVGRYYISKKPNVFKVLDEDFGGESYGVGFRKTDNSF 235 Query: 238 YNIVSWTHYAMVTAE-ELGITQKNI 261 V ++ I++K Sbjct: 236 REAVDKALDEVIKDGTADKISEKWF 260 >gi|170755905|ref|YP_001780101.1| polar amino acid ABC transporter amino acid-binding protein [Clostridium botulinum B1 str. Okra] gi|169121117|gb|ACA44953.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum B1 str. Okra] Length = 267 Score = 152 bits (385), Expect = 6e-35, Method: Composition-based stats. Identities = 43/265 (16%), Positives = 94/265 (35%), Gaps = 12/265 (4%) Query: 2 YKDFFVSILCLIILFFTSF----STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 K+ SIL + ++F + S + L DI +G G++ G+ Sbjct: 3 KKNILFSILIMGLIFMLTGCDNKSKEDTSLKDINAKGEFVVGLDDSFPPMGFKNDKGEIV 62 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D + ++ + K+ + P+ L+L +K ID++ T R+ + Sbjct: 63 GFDIDLAKEVAKKMG---VKVVFKPVQWDGVVLSLNNKDIDVIWNGLTITEKRKEQINF- 118 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + Q +++ I S L+ ++ +Q G+++E+ L + Sbjct: 119 -SKPYVENKQIIVVNNDSNIKSKKDLNKKTVAIQLGSSSEVALDSDKDFVKSLKELKKYS 177 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E +A R D + + + +P+ +L + + D + Sbjct: 178 NNTEALMDLQAKRVD--AVVVDEVVGRYYISKKPNVFKVLDEDFGGESYGVGFRKTDNSF 235 Query: 238 YNIVSWTHYAMVTAE-ELGITQKNI 261 V ++ I++K Sbjct: 236 REAVDKALDEVIKDGTADKISEKWF 260 >gi|307329227|ref|ZP_07608392.1| extracellular solute-binding protein family 3 [Streptomyces violaceusniger Tu 4113] gi|306885126|gb|EFN16147.1| extracellular solute-binding protein family 3 [Streptomyces violaceusniger Tu 4113] Length = 303 Score = 152 bits (385), Expect = 6e-35, Method: Composition-based stats. Identities = 38/248 (15%), Positives = 83/248 (33%), Gaps = 13/248 (5%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 ++S L +KRG + G G GFD++ + +++ + KI + Sbjct: 53 DSSTLKAAQKRGKIVIGAKADQPFLGFQDTEGKRSGFDIEIAKMVAADLGFSADKITFKT 112 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH--KKKGISSV 140 +++ R ++ Q+D R+ +G A Y G ++ K I+ Sbjct: 113 VDSNVRETSISKGQVDYYVGTYTINDERKKQVGFA--GPYYQAGADLLVRMEDKGKITGP 170 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + G +C G+T + K + + DA T D + Sbjct: 171 DSIKGKKVCSIVGSTPLQEI----KKPKYGAKTTELSKYSLCVKQLLDGQVDAVTTDDAI 226 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L R ++ ++ ++ P + + D + +S + + + G +K Sbjct: 227 LKGYAAQ--RSTKLHVVGKPFTEEPYGIGMNKNDKALRDAISDSLEEHI---KNGDYKKA 281 Query: 261 INQVSKDT 268 + Sbjct: 282 YEGTLGKS 289 >gi|218440339|ref|YP_002378668.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7424] gi|218173067|gb|ACK71800.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7424] Length = 276 Score = 152 bits (385), Expect = 6e-35, Method: Composition-based stats. Identities = 46/256 (17%), Positives = 94/256 (36%), Gaps = 19/256 (7%) Query: 1 MYKD----FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K+ FF+S++CL ++ ++L I++ G L G + F G+W Sbjct: 1 MNKNKITLFFLSLICLTNYSLKVYA--ETVLEKIQRTGELNAGARIDAIPFGYKTDKGEW 58 Query: 57 KGFDVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ V+ R + + + P K+ + RF ++ +Q+DI+ T T R Sbjct: 59 TGYSVELLRLIHQDLEKKLNKPIKLNLKEVTIDNRFQTVEKQQVDIVCGATTITQQRLEK 118 Query: 114 LGLAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 + + + G F++ L +I TTT+ + + + Sbjct: 119 VDFSI--PFFMTGSQFLVKLEDATNFDINGTLKDKAIAYLPNTTTDQIIRQIYPFAKWQ- 175 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN-DRPSEHVILPD-IISKSPLAPA 229 +E +A A D L + + P + ++P+ ++ A Sbjct: 176 ---TVTNRDEGVRKLKAGEVTAVVSDGILLVGEIVRQGNNPRDFALMPNVPMTTELYACI 232 Query: 230 IIQGDTEWYNIVSWTH 245 + + + +W V T Sbjct: 233 LPKNNPQWKEFVDQTI 248 >gi|317153668|ref|YP_004121716.1| family 3 extracellular solute-binding protein [Desulfovibrio aespoeensis Aspo-2] gi|316943919|gb|ADU62970.1| extracellular solute-binding protein family 3 [Desulfovibrio aespoeensis Aspo-2] Length = 289 Score = 152 bits (385), Expect = 7e-35, Method: Composition-based stats. Identities = 52/291 (17%), Positives = 92/291 (31%), Gaps = 34/291 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTN----------------------ASILGDIKKRGFLKC 38 M + + ++F + AS L I +RG L+ Sbjct: 1 MKRVLGLVAALATLVFLVACGQQPEQQAGAPAPKQDMNVRLELSKASALEKIMQRGTLRV 60 Query: 39 GINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQID 98 G+ G + F G+ GFDVD ++ A+ K++ + AL S + D Sbjct: 61 GLEAGYMPFEMTDKKGNIVGFDVDMVTEMAKAMG---VKLELVNTAWDGIIPALLSDKFD 117 Query: 99 ILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTT 156 I++ R + + A I I+S L+ G +I + GTT Sbjct: 118 IIASGMTVNQERNLKINFADPYIIVGQTALINAVDADKITSWKDLNAEGITITSKLGTTG 177 Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216 E + K FE E + A D+ + Sbjct: 178 EQAVKRLMPKATYK----SFETESEAMLEVLNGKATATVYDLPMTSIFYAERGKEGGMKF 233 Query: 217 LPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 L + + PL AI +GD ++ +W + + + G + + Sbjct: 234 LSEPFTYEPLGWAINKGDPDFL---NWLNNFLRQTKNDGRYEAIYTKWFGS 281 >gi|119511878|ref|ZP_01630977.1| glutamine-binding protein of glutamine ABC transporter [Nodularia spumigena CCY9414] gi|119463446|gb|EAW44384.1| glutamine-binding protein of glutamine ABC transporter [Nodularia spumigena CCY9414] Length = 236 Score = 152 bits (385), Expect = 7e-35, Method: Composition-based stats. Identities = 43/233 (18%), Positives = 93/233 (39%), Gaps = 13/233 (5%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 +A+ + +I++RG+L + L +G+ +G ++D + L+ + +++ Sbjct: 2 ASAAQMPEIQRRGYLTIAVKDNLRPLGFRDVDGNLQGLEIDLAKRLALDLLGKADAVRFQ 61 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 P+ ++R + + ++D+ T R + YFDG I+ K +S +S Sbjct: 62 PVANRDRLSVVLNNKVDLAIARVTATESRARLVSF--SVPYYFDGT-LIVTKDACVSQLS 118 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L+ I V ++T + Y + + +E + + A+ D S L Sbjct: 119 DLANRKIAVIKNSSTIAQVRYYVPKA----ELVGVDSYQEGRSLTENNTVVAFAADASVL 174 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQ--GDTEWYNIVSWTHYAMVTAE 252 ++ +LP +S PL+ + + + V+ A TAE Sbjct: 175 SGWVQQYP---QYRLLPTKLSTEPLSVVMPKGLQYDQLRRQVNEAI-AKYTAE 223 >gi|328956328|ref|YP_004373661.1| amino acid ABC transporter substrate-binding protein, PAAT family [Coriobacterium glomerans PW2] gi|328456652|gb|AEB07846.1| amino acid ABC transporter substrate-binding protein, PAAT family [Coriobacterium glomerans PW2] Length = 282 Score = 152 bits (385), Expect = 7e-35, Method: Composition-based stats. Identities = 48/258 (18%), Positives = 94/258 (36%), Gaps = 18/258 (6%) Query: 1 MYKDFFVSILCLIILFFTS--FSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWK 57 M+ + + L + +S + IK RG LK G+ + G+ + A+G ++ Sbjct: 13 MFGMAAIGVAAAGSLVGCGEDSGSGSSKIEAIKSRGKLKAGVKKDVPGYGYLDPASGKYE 72 Query: 58 GFDVDFCRALSSAIF-------DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 G ++D C +++++ +++ + K R + + +DI+ T R Sbjct: 73 GMEIDLCYQVAASVLEVSYEEAKQKDLVEFKDVTPKTRGPLIDNDNLDIICATYTITDTR 132 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 + S + D G ++ K G+ + L G I V G+ T+ + Sbjct: 133 KESYDFSE--PYRTDYVGMMVKKSSGMEDLDDLDGKVIGVSQGSDTKAAITKMLADQKAD 190 Query: 171 YHP--IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 P F + +A A D + D S L K D E + Sbjct: 191 AKPTYQEFPDYPSLKSALDAGNVDVFAMDRSTL---KNYMDDSVELLREDIKFGPQEYGI 247 Query: 229 AIIQGDTEWYNIVSWTHY 246 A +G ++ +V+ T Sbjct: 248 ASKKG-SDLSPVVAKTVK 264 >gi|16262494|ref|NP_435287.1| ABC transporter, periplasmic solute-binding protein [Sinorhizobium meliloti 1021] gi|14523099|gb|AAK64699.1| ABC transporter, periplasmic solute-binding protein [Sinorhizobium meliloti 1021] Length = 271 Score = 152 bits (385), Expect = 7e-35, Method: Composition-based stats. Identities = 43/257 (16%), Positives = 89/257 (34%), Gaps = 11/257 (4%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + +S+L I+ A + IK G +K G+ F + AN G+D D Sbjct: 11 RRIAISVLGAAIVAGLVAPAAAQTVETIKSAGTVKVGMLVDFPPFGIMDANNQPDGYDAD 70 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + L+ + + + +P+ R LQS Q+D+L + T R ++ + Sbjct: 71 VAKLLAKELGVE---VTIVPVTGPNRIPYLQSNQVDLLVASLGITEERAKNVDFSQ--PY 125 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 G ++ L+G +I V +T + + F+ Sbjct: 126 AGISIGVFGAADLAVTKPEDLAGKTIGVARASTQDTATTKIAPQ---DANIQRFDDDASA 182 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A + + + +S + A ++ P +S+ A+ +G +E V+ Sbjct: 183 VQALLSGQVELI--GVSNVVAAQIEAAAPGRFNQ-KLQLSQQVQGIAVRKGSSEMLKFVN 239 Query: 243 WTHYAMVTAEELGITQK 259 + +L + Sbjct: 240 GFLDKVKADGQLNAIHE 256 >gi|219855438|ref|YP_002472560.1| hypothetical protein CKR_2095 [Clostridium kluyveri NBRC 12016] gi|219569162|dbj|BAH07146.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 276 Score = 152 bits (384), Expect = 7e-35, Method: Composition-based stats. Identities = 61/253 (24%), Positives = 95/253 (37%), Gaps = 19/253 (7%) Query: 1 MYK--DFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M K ++++ ILF S T++++L +IKK G + G G +N Sbjct: 11 MKKITAIIITVIFGAILFTGCGSSTKKDTSSNLLENIKKSGKIVIGTEEGYPPMEFRDSN 70 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G GFDVDF ++ + K ++L ++ LAL SK+ D + T R + Sbjct: 71 GQLVGFDVDFSNEVAKRLG---VKAEFLVMDFNGIILALNSKKFDAAIASISITDERRKT 127 Query: 114 LGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 GQ + + I V L G I + GTT E +A+ K Sbjct: 128 TDF--STPYVVGGQVITVKNGREDIKGVDDLKGKVIACELGTTGE-NVANGIKGVK---E 181 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 +++V E R DA D + E +L I+SK P+ A + Sbjct: 182 LKKYDKVTEAFQDMSIGRVDATIIDQQV--GGYYIQKKKDEFKMLEGILSKEPMGVAYRK 239 Query: 233 GDTEWYNIVSWTH 245 D N V Sbjct: 240 EDDSLKNEVDKII 252 >gi|126658585|ref|ZP_01729732.1| glutamine-binding protein of glutamine ABC transporter [Cyanothece sp. CCY0110] gi|126620172|gb|EAZ90894.1| glutamine-binding protein of glutamine ABC transporter [Cyanothece sp. CCY0110] Length = 260 Score = 152 bits (384), Expect = 7e-35, Method: Composition-based stats. Identities = 47/254 (18%), Positives = 82/254 (32%), Gaps = 12/254 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + K ++ I A+ L DIK+RG L + + +G + Sbjct: 5 LTKKLVSVLIITAIFNVGDSKLIAATLEDIKQRGKLIVAVKDNIRPLGFRNQENKLQGLE 64 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D R L+ I DP + P++ +ER + ++D+ R + P Sbjct: 65 IDLARQLAQDILGDPQAVVLQPVSNQERLQKVIDGEVDLAIARITINTSRGRIVDF--SP 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y DG G I + I S LS I V ++T + I + Sbjct: 123 YYYLDGTGIITN-NPKIRSKYHLSQGKIAVLKRSSTIAVIRTEVPQA----ELIGVSSYQ 177 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ--GDTEWY 238 E + DA+ D S L ++ LP +S L + + Sbjct: 178 EAMTLLETQQVDAFAADNSILTGWVQQYP---QYYQLPVRLSGEGLGVVMPKGLQYASLR 234 Query: 239 NIVSWTHYAMVTAE 252 + V+ + Sbjct: 235 SRVNQAIGRWKASG 248 >gi|297243524|ref|ZP_06927456.1| ABC-type amino acid transport/signal transduction system, periplasmic component [Gardnerella vaginalis AMD] gi|296888569|gb|EFH27309.1| ABC-type amino acid transport/signal transduction system, periplasmic component [Gardnerella vaginalis AMD] Length = 255 Score = 152 bits (384), Expect = 7e-35, Method: Composition-based stats. Identities = 41/221 (18%), Positives = 87/221 (39%), Gaps = 9/221 (4%) Query: 33 RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92 + ++ GI G K +G + GFDVD + ++ + +I + +K+R L Sbjct: 12 KKVIRIGIKFDQPGIGF-KKSGTYVGFDVDVAKYVAKKLGYSEDQIVWKESPSKQRETML 70 Query: 93 QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQ 151 Q+ +D++ + T R+ + A + GQ ++ K + +S + L G +C Sbjct: 71 QNGDVDMIVASYSITDARKKMVTFA--GPYFIAGQDLLVRKDEHKVSGPNDLDGKRLCSV 128 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 +G+T+ + + + + + K + E A + DA T D L L + Sbjct: 129 SGSTSAIAIKERYSS---KVQLMQQPGYAECATALFSGIVDAVTTDDIILAGLATASR-- 183 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 ++ + I +G+T ++ M+ Sbjct: 184 GRLKLVNKPFTAEYYGIGIKKGNTGLAKKINAALKDMIRNG 224 >gi|251790186|ref|YP_003004907.1| extracellular solute-binding protein family 3 [Dickeya zeae Ech1591] gi|247538807|gb|ACT07428.1| extracellular solute-binding protein family 3 [Dickeya zeae Ech1591] Length = 278 Score = 152 bits (384), Expect = 7e-35, Method: Composition-based stats. Identities = 43/248 (17%), Positives = 95/248 (38%), Gaps = 14/248 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59 M ++ +L FTS A +L D+ +G LKC + + + F+ AN G Sbjct: 1 MTVKKLSAVFASSVL-FTSIGAQADLLADMTAQGELKCAVYSDVPPFSSPDANTRQLVGM 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD C AL+ + K+ +P + + R + + + D+L N +T R + Sbjct: 60 DVDLCNALAKQMG---LKLTLVPTSVEARIAVIVTGRADVLIANLAYTKTRGNQIQF--S 114 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + ++ K+ ++ G I GTT+E ++ + + F+ Sbjct: 115 DPYYVAKEMLLVKKENADQTLEYFKGKRISATKGTTSEQSI------NLKGGKAVTFQDS 168 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPS-EHVILPDIISKSPLAPAIIQGDTEWY 238 A ++ + ++ + + E ++ + ++ P+ + + + Sbjct: 169 ASAFLALEQNKAVGFVTNMMTGIKMISQAKKDGIELAMIKEPMALEPIGVGMKRDEPALL 228 Query: 239 NIVSWTHY 246 V+ + Sbjct: 229 AAVNTSLK 236 >gi|153954995|ref|YP_001395760.1| lysine-arginine-ornithine-binding extracellular protein precursor [Clostridium kluyveri DSM 555] gi|146347853|gb|EDK34389.1| Predicted lysine-arginine-ornithine-binding extracellular protein precursor [Clostridium kluyveri DSM 555] Length = 266 Score = 152 bits (384), Expect = 8e-35, Method: Composition-based stats. Identities = 61/253 (24%), Positives = 95/253 (37%), Gaps = 19/253 (7%) Query: 1 MYK--DFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M K ++++ ILF S T++++L +IKK G + G G +N Sbjct: 1 MKKITAIIITVIFGAILFTGCGSSTKKDTSSNLLENIKKSGKIVIGTEEGYPPMEFRDSN 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G GFDVDF ++ + K ++L ++ LAL SK+ D + T R + Sbjct: 61 GQLVGFDVDFSNEVAKRLG---VKAEFLVMDFNGIILALNSKKFDAAIASISITDERRKT 117 Query: 114 LGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 GQ + + I V L G I + GTT E +A+ K Sbjct: 118 TDF--STPYVVGGQVITVKNGREDIKGVDDLKGKVIACELGTTGE-NVANGIKGVK---E 171 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 +++V E R DA D + E +L I+SK P+ A + Sbjct: 172 LKKYDKVTEAFQDMSIGRVDATIIDQQV--GGYYIQKKKDEFKMLEGILSKEPMGVAYRK 229 Query: 233 GDTEWYNIVSWTH 245 D N V Sbjct: 230 EDDSLKNEVDKII 242 >gi|289624706|ref|ZP_06457660.1| cystine transporter subunit [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289650262|ref|ZP_06481605.1| cystine transporter subunit [Pseudomonas syringae pv. aesculi str. 2250] gi|330865667|gb|EGH00376.1| cystine transporter subunit [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 265 Score = 152 bits (384), Expect = 8e-35, Method: Composition-based stats. Identities = 57/262 (21%), Positives = 94/262 (35%), Gaps = 12/262 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + F S L L++ + A L IK G L G+ F+ V NG GF+ Sbjct: 7 RRTFLFSALSLMLGTGIAGQAMAGEQLQKIKDSGTLNVGLEGTYPPFSFVDENGKLTGFE 66 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F AL+ + K + P AL SK++D++ + R+ + P Sbjct: 67 VEFSEALAKELG---VKAKIQPSKWDGILAALDSKRLDVVINQVTISEERKKKYDFSE-P 122 Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 T Q ++ K I + L+G + V GT E L + +K ++ Sbjct: 123 YTVSGIQALVLKKNEDTIKTAKDLTGKKVGVGLGTNYEQWLKENVPGAIVK----TYDDD 178 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 R DA D L AL++ ++ V D S+ A+ +G+ E Sbjct: 179 PSKIQDLSVGRIDAILVDR--LAALEMATKTKNKLVPAGDAFSRQESGIALRKGEPELQA 236 Query: 240 IVSWTHYAMVTAEELGITQKNI 261 + + L K Sbjct: 237 AIDKAIDKLRADGTLEKLSKKY 258 >gi|329934517|ref|ZP_08284558.1| sugar-binding protein [Streptomyces griseoaurantiacus M045] gi|329305339|gb|EGG49195.1| sugar-binding protein [Streptomyces griseoaurantiacus M045] Length = 337 Score = 152 bits (384), Expect = 8e-35, Method: Composition-based stats. Identities = 37/240 (15%), Positives = 81/240 (33%), Gaps = 15/240 (6%) Query: 16 FFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKAN----GDWKGFDVDFCRALSS 69 + + + IK R L G++ + N + +GFD+D R ++ Sbjct: 68 SLSPSEADGDTVKAIKSRAHPRLVIGVDQNSYRWGYRDPNRSGSSELEGFDIDLARRIAR 127 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 I DP + + + +R A++S ++D++ R T R + + GQ Sbjct: 128 EILGDPDAVVFRAIPTNQRTEAIRSGRVDMVVRTMTITCDRLRQVAF--SAPYFRTGQQV 185 Query: 130 IMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE---EIDAA 185 + +K I+ L+ +C G+T L + + + V + Sbjct: 186 LAPRKSDITGYDDTLAHKRVCSATGSTALTQLTADRGSGRIPPSTDISVTVPNQLDCLVR 245 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + + DA D + + + + + A+ +G + V+ Sbjct: 246 LQLGQVDAVVTDGALAASQAAQDPT---VELKGRPFTTEYYGVAMKKGADDLVRRVNRVL 302 >gi|239816640|ref|YP_002945550.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] gi|239803217|gb|ACS20284.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] Length = 266 Score = 152 bits (384), Expect = 8e-35, Method: Composition-based stats. Identities = 43/258 (16%), Positives = 92/258 (35%), Gaps = 10/258 (3%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + +++ + +L + + L ++ K +K + T + V N +G DV Sbjct: 7 KRHLSLALASVAMLAAAGGAQAQNALDNVLKAKTIKIAVPTDYPPYGSVDRNMKPQGLDV 66 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + +++ + K++ +P+ + R LQ+++ D++ RE + + Sbjct: 67 EMAELIAAKLG---VKVELVPVTSANRIPYLQTRKADLVISTLGKNPEREKVIDFSAAYA 123 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 +F Q K ++S + ++G ++ V G + L FE Sbjct: 124 PFF--QAVYAAKSMKLTSFADMAGKTVAVTRGAMEDQELNKVAP---PNVDYRRFEDNNA 178 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 AA+ A + SA A + P ++ SP + +G+T V Sbjct: 179 TIAAFVAGQTQTLAT--SAAVAGDMLAKNPKVSAEFKLLLKDSPCFVGVAKGETALKTKV 236 Query: 242 SWTHYAMVTAEELGITQK 259 + A L K Sbjct: 237 NEIIAAAKKDGTLDAMSK 254 >gi|259909374|ref|YP_002649730.1| Putative amino acid ABC transporter, substrate binding protein [Erwinia pyrifoliae Ep1/96] gi|224964996|emb|CAX56524.1| Putative amino acid ABC transporter, substrate binding protein [Erwinia pyrifoliae Ep1/96] gi|283479446|emb|CAY75362.1| putative ABC transport system, periplasmic component [Erwinia pyrifoliae DSM 12163] Length = 261 Score = 152 bits (384), Expect = 8e-35, Method: Composition-based stats. Identities = 44/229 (19%), Positives = 87/229 (37%), Gaps = 10/229 (4%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 A L DI+KRG L+ + F V + +G+D+D L+ + K+Q + Sbjct: 21 ARADQLQDIEKRGVLRVAVPQDFPPFGSVGTDLQPQGYDIDMATYLARQM---KLKLQLV 77 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 P+ + R LQ+ ++D++ + RE + + +F G ++ + S + Sbjct: 78 PVTSANRVPYLQTDKVDLVISSLGKNPEREKVIDFSRAYAPFF--LGVFGPQQGTLKSAA 135 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 +LSG S+ V G ++ L +E +AY + + + Sbjct: 136 ELSGKSVGVTRGAVEDMVLTSVVPK---DAQVKRYEDNNTTLSAYLSGQVQYVATGNLVV 192 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 A+ N + + ++ SP I +G+ V +T Sbjct: 193 AAIARQNADKA--PLAQFMLKDSPCFIGIKKGEPALKAKVDALIAQALT 239 >gi|89899831|ref|YP_522302.1| extracellular solute-binding protein [Rhodoferax ferrireducens T118] gi|89344568|gb|ABD68771.1| extracellular solute-binding protein, family 3 [Rhodoferax ferrireducens T118] Length = 265 Score = 152 bits (384), Expect = 8e-35, Method: Composition-based stats. Identities = 50/275 (18%), Positives = 97/275 (35%), Gaps = 16/275 (5%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K ++ ++ TS A L +IK+R + GI+ F + A G DV Sbjct: 5 KKIISALAIALVAICTSV--QADTLANIKQRNKVLVGIDLTFAPFGSMDAAMKPMGSDVS 62 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + L+ + + ++ + L R L + ++D++ + T R+ + Sbjct: 63 AAKMLAKDLGVE---LEIVQLTGPNRVPYLLTGKVDMVISSFSITPERKKVIDF--SVPY 117 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 + K I+ + L+G I + G E L P+ F+ Sbjct: 118 SVSESVILAPKSVQITKLQDLAGKRIGLVRGNLQENLLKPIAPE---GMIPVRFDDDASN 174 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A + + DA G L + + P + V I P I + DT + Sbjct: 175 VVALLSGQVDALGGSKELLPNIAKQS--PEKQVESKLSIGILPHGIGIRKEDTSLL---N 229 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277 WT+ ++ + G + + PD+ +F+ Sbjct: 230 WTNQWVMANLKNGRLSNSYKEAVGFPL-PDMSQFM 263 >gi|327183100|gb|AEA31547.1| glutamine ABC transporter [Lactobacillus amylovorus GRL 1118] Length = 219 Score = 152 bits (384), Expect = 9e-35, Method: Composition-based stats. Identities = 38/223 (17%), Positives = 86/223 (38%), Gaps = 12/223 (5%) Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 + +GF++D AL+ + +K ++ A + L++K ID + T R+ Sbjct: 4 KDSKIRGFEIDLAEALTHKMLGKNAKANFVTTTANTKIQLLKNKNIDAVIAAMTITPERK 63 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 + + GQ ++ K I +V L+ + + GTT + + Sbjct: 64 KQVNF--SNPYFPAGQSIMVAKNSKIKNVKDLNNKRVLIVKGTTAADAVHKFAPKA---- 117 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + F+ + AA +A + DA D L + +D P + + + P A+ Sbjct: 118 EILQFDDYGQAFAALKADQGDALVTDNGILAGI--LHDNPG-YKLTGGTFTNQPYGIAVN 174 Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 +G T ++ + A+ ++ G + + + +++ Sbjct: 175 KGQTA---MMKHINTALDELKKDGTYTRLAKKWFGNIPGFNIK 214 >gi|298485133|ref|ZP_07003229.1| Cystine-binding periplasmic protein precursor [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298160385|gb|EFI01410.1| Cystine-binding periplasmic protein precursor [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330886121|gb|EGH20022.1| cystine transporter subunit [Pseudomonas syringae pv. mori str. 301020] Length = 265 Score = 152 bits (384), Expect = 9e-35, Method: Composition-based stats. Identities = 57/262 (21%), Positives = 94/262 (35%), Gaps = 12/262 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + F S L L++ + A L IK G L G+ F+ V NG GF+ Sbjct: 7 RRTFLFSALSLMLGTGIAGQAMAGEQLQKIKDSGTLNVGLEGTYPPFSFVDENGKLTGFE 66 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F AL+ + K + P AL SK++D++ + R+ + P Sbjct: 67 VEFSEALAKELG---VKAKIQPSKWDGILAALDSKRLDVVINQVTISEERKKKYDFSE-P 122 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 T Q ++ K I + L+G + V GT E L + +K ++ Sbjct: 123 YTVSGIQALVLKKNADTIKTAKDLTGKKVGVGLGTNYEQWLKENVPGAIVK----TYDDD 178 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 R DA D L AL++ ++ V D S+ A+ +G+ E Sbjct: 179 PSKIQDLSVGRIDAILVDR--LAALEMATKTKNKLVPAGDAFSRQESGIALRKGEPELQA 236 Query: 240 IVSWTHYAMVTAEELGITQKNI 261 + + L K Sbjct: 237 AIDKAIDKLRADGTLEKLSKKY 258 >gi|299069322|emb|CBJ40588.1| putative amino-acid-binding periplasmic abc transporter protein [Ralstonia solanacearum CMR15] Length = 280 Score = 152 bits (384), Expect = 9e-35, Method: Composition-based stats. Identities = 50/263 (19%), Positives = 95/263 (36%), Gaps = 15/263 (5%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRAL 67 + L L SF A +I+K L+CG + FA + GFDVD C+AL Sbjct: 10 LTVLACLCAASFPVLADQWAEIQKNKELRCGTFADVPPFAAPDPKTREMVGFDVDLCQAL 69 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + + PL+ + R ++ ++D+ N +TL R + Y + Sbjct: 70 AKHLG---VAARITPLSVEARVPEVKMGRVDVTVANLAYTLGRAEQIQF--SDPYYLAKE 124 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 + S + G + G+T+EL++ P+ F+ A + Sbjct: 125 MLAVRASDPGKSKADYKGKRLAAAKGSTSELSIKMN------GSEPVTFQDTGSAYMAVQ 178 Query: 188 AHRCDAYTGDISALYALKLTNDRPS-EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + + + L + E ++ + + P+ + +G+ V+ Sbjct: 179 QGKALGIVSNTMTITKLVNQSKTGGIELKVIAEPMIYQPIGVGMKKGEPALLAKVNEALL 238 Query: 247 AMVTAEELGITQKNINQVSKDTT 269 AM A E I Q + +T Sbjct: 239 AMDKAGE--INQLWNKWLGPNTE 259 >gi|126444872|ref|YP_001063871.1| amino acid ABC transporter periplasmic protein [Burkholderia pseudomallei 668] gi|126224363|gb|ABN87868.1| ABC-type amino acid transport/signal transduction system, domain protein [Burkholderia pseudomallei 668] Length = 240 Score = 152 bits (384), Expect = 9e-35, Method: Composition-based stats. Identities = 37/217 (17%), Positives = 74/217 (34%), Gaps = 6/217 (2%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKI 78 +A L I + V F + GF D A+ + +I Sbjct: 15 HAQTLKKIADTNRMTVSYRESAVPFCYLLTPHKAVGFSADLTDAVVDDVRKKLKMPGLQI 74 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 Y+P+ + R L + D+ +T T R + + ++ G ++ K I Sbjct: 75 AYIPVTGQNRNPLLVNDTYDLEGGSTTNTAARGQDVSFSIS--LFYAGTRVLVKKASRIR 132 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + L+G ++ AG+T+E + Y H++ + + + R D Sbjct: 133 GYADLAGKTVATAAGSTSENVIRKYAADHHLDIDVVPAKDYAAGPRMVESDRTAVLALDD 192 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 L+ ++ P + D + P + +GD Sbjct: 193 VLLFGMRANAADPELLEVAGDALQVEPRGCMVRKGDP 229 >gi|270290989|ref|ZP_06197212.1| polar amino acid transport system substrate-binding protein [Pediococcus acidilactici 7_4] gi|270280385|gb|EFA26220.1| polar amino acid transport system substrate-binding protein [Pediococcus acidilactici 7_4] Length = 272 Score = 152 bits (384), Expect = 9e-35, Method: Composition-based stats. Identities = 46/275 (16%), Positives = 98/275 (35%), Gaps = 19/275 (6%) Query: 1 MYK----DFFVSILCLIILFFTSFSTNA------SILGDIKKRGFLKCGINTGLVGFAEV 50 M K V L+I A S I+ + + G++ V Sbjct: 1 MKKLVKFSLLVMACALLIPGLAGCGKTAQNNPQPSSWKSIQAKHHVVIGLDDSFVPMGFR 60 Query: 51 KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 + NG G+D+D RA+ K+ + ++ L+++ +D++ T R Sbjct: 61 QKNGKLAGYDIDLARAVFKQYG---IKVDFQTIDWSMNVTELRNQTVDLIWNGLTITDER 117 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY---FKAH 167 + ++ + + Q ++ K + I S ++G ++ VQ+G++ + + K Sbjct: 118 QRAMAFSE--PYLVNQQVLVVKKSQHIHSPQDMTGKTLGVQSGSSGAQDIDRFPKLLKQR 175 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 K+ P++++ +A R D P ++ ++ + A Sbjct: 176 IKKHTPVLYDTFNNAFIDLKADRIQGLLIDSVYANYYLQHLPNPGDYRVIKSGMPNEYFA 235 Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNI 261 I +G+ E + + EL I QK Sbjct: 236 VGIKKGNQEVKQKIDQGIEHLRKTGELQRINQKWF 270 >gi|239834032|ref|ZP_04682360.1| extracellular solute-binding protein [Ochrobactrum intermedium LMG 3301] gi|239822095|gb|EEQ93664.1| extracellular solute-binding protein [Ochrobactrum intermedium LMG 3301] Length = 280 Score = 151 bits (383), Expect = 9e-35, Method: Composition-based stats. Identities = 45/258 (17%), Positives = 90/258 (34%), Gaps = 12/258 (4%) Query: 3 KDFFVSILCLIILFFT-SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + ++ + L + + A + IK G +K G+ F + + + G+D Sbjct: 19 RRLAMAFIGAGALATVLAPAAFAQTVDGIKSAGKIKIGMLVDFPPFGIMNTSNEPDGYDA 78 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D + L+ I + Q +P+ R LQS Q+D+L + T R S+ + Sbjct: 79 DVAKLLAKEIGVEA---QIVPVTGPNRIPYLQSGQVDVLVASLGITEERAKSVDFSQ--P 133 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 G K ++ LSG +I V +T + + + F+ Sbjct: 134 YAGISIGVFGPKDIAVAKPEDLSGKTIGVARASTQDTAVTKVAPQ---DANIRRFDDDAS 190 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A + + + S + A ++ P + +S+ A+ +G E V Sbjct: 191 AVQALLSGQVELIGL--SNVVAAEIEKAAPGRYEQ-KIQLSQQVQGIAVRKGSAEMLEFV 247 Query: 242 SWTHYAMVTAEELGITQK 259 + + EL + Sbjct: 248 NKFIEKAKSDGELNKIHE 265 >gi|284929259|ref|YP_003421781.1| amino acid ABC transporter substrate-binding protein, PAAT family [cyanobacterium UCYN-A] gi|284809703|gb|ADB95400.1| amino acid ABC transporter substrate-binding protein, PAAT family [cyanobacterium UCYN-A] Length = 261 Score = 151 bits (383), Expect = 9e-35, Method: Composition-based stats. Identities = 50/254 (19%), Positives = 97/254 (38%), Gaps = 13/254 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 MYK F I+ ++ + +AS L +I++R + + + + +G + Sbjct: 7 MYKLFLTFIVSFALVLNHNIVLSAS-LEEIRERKKIIIAVKNNTRPLGFLNSKNQLEGLE 65 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + L+ I D + I + +N +ER + ++DI+ R + Sbjct: 66 IDLAKQLAKDILGDSNAILFKFVNNQERLQTVIDGEVDIVIARMTIDSFRSRLINF--SS 123 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y D G I KK I S L ++I V + T + F N + + + Sbjct: 124 YYYLDSTGIIT-KKHQIKDSSDLFNSTIAVINHSDTISVIRSNFPKTN----LVGVDSYQ 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ--GDTEWY 238 E + + DA+ D S L + P H + +S L I + ++ Sbjct: 179 EAFKLMESQKVDAFAADNSILTGWI--QEYPQYHTLS-LRLSSKSLGIGIPKGLKSSDLR 235 Query: 239 NIVSWTHYAMVTAE 252 NI++ + Y + + Sbjct: 236 NIINQSIYRLKISG 249 >gi|282896969|ref|ZP_06304973.1| extracellular solute-binding protein, family 3 [Raphidiopsis brookii D9] gi|281198142|gb|EFA73034.1| extracellular solute-binding protein, family 3 [Raphidiopsis brookii D9] Length = 274 Score = 151 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 46/244 (18%), Positives = 95/244 (38%), Gaps = 22/244 (9%) Query: 5 FFVSILCLIILFF---------TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 F + L L IL F T ++ A+ + +I++RG++ + + A G+ Sbjct: 11 FSLGFLPLTILLFSWVVLPLPGTINTSLAATMQEIEERGYITIAVKDNIPPLAFRDKQGN 70 Query: 56 WKGFDVDFCRALSSAIFDD------PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 +G ++D + L+ + D ++++ P+ ER + + ++D+ T Sbjct: 71 LQGLEIDLAKRLTRDLLGDSPSSRVKLQVKFQPVTNMERLPVVFNHRVDLAIARVTATPS 130 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 R ++ Y+DG + K I S L+ ICV ++T + Sbjct: 131 RSR--IVSLSIPYYYDGTAI-VTKNLTIQKPSDLNKRRICVLNYSSTIPHVRYAIPQG-- 185 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + E + DA D + +++ S++ IL D +S PL+ Sbjct: 186 --ELVGVNSYLEAKKLLDNGQVDACAADSTVFQGWIEADNQYSQYKILLDKLSVEPLSIV 243 Query: 230 IIQG 233 + +G Sbjct: 244 MPKG 247 >gi|86741119|ref|YP_481519.1| extracellular solute-binding protein [Frankia sp. CcI3] gi|86567981|gb|ABD11790.1| amino acid ABC transporter substrate-binding protein, PAAT family [Frankia sp. CcI3] Length = 343 Score = 151 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 39/230 (16%), Positives = 80/230 (34%), Gaps = 8/230 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 ++L I++RG+L G+ + F + G ++GFDV+ + IF +++ Sbjct: 94 GTVLETIERRGYLIAGVLADVPPFGSISPFTGQFEGFDVEIANLVGRRIFGADGHVRFRA 153 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ER L+ +D++ R + + Y + Q ++ + + Sbjct: 154 VTYAERIPVLRDGAVDVVVATMTTNCERRALVDF--SAVYYNETQRVLVPRDSPYQGMDD 211 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G +C A A + + + + +A DA + L Sbjct: 212 LGGRRVCTAA--GAAAGAAATIRRAPSRPVLRTVPNIADCLVLLQAGEVDAVMTTTAILN 269 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 + P +V+ P +S P A A+ E V+ + Sbjct: 270 GMAAQ--DPRLYVVGP-ALSDEPDAVAVSLDHPELTRFVNGVLARAIADG 316 >gi|210629971|ref|ZP_03296194.1| hypothetical protein COLSTE_00078 [Collinsella stercoris DSM 13279] gi|210160722|gb|EEA91693.1| hypothetical protein COLSTE_00078 [Collinsella stercoris DSM 13279] Length = 275 Score = 151 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 48/239 (20%), Positives = 93/239 (38%), Gaps = 18/239 (7%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFD--- 73 ++ + S L I+ RG L G+ + G+ A ++G ++D C ++++IF Sbjct: 25 STSAAPGSKLAAIQARGQLNAGVKKDVPGYGYYDPAARTYEGMEIDLCYQVAASIFGVSY 84 Query: 74 ----DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 + + + + K R + + Q+DI+ T R S + T D G Sbjct: 85 EEARERELVAFTDVTPKTRGPLIDNDQLDIVCATYTITPERRESWDFSSAYRT--DYVGL 142 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI--VFERVEEIDAAYR 187 ++ K+ G ++ L G I V G TT+ + K ++ P F I ++ Sbjct: 143 MVKKRSGFKRIADLDGRIIGVSQGATTQGLIEQMLKDEDIDATPEFLAFSGYPIIKSSLD 202 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDTEWYNIVSWTH 245 A D + D S L + ++ P+ + A +G ++ +V T Sbjct: 203 AGNIDCFAMDRSTLAGYM----NETVELLEPEVKFGEQQYGIATKKG-SDLSAVVDQTV 256 >gi|257481900|ref|ZP_05635941.1| cystine transporter subunit [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331009533|gb|EGH89589.1| cystine transporter subunit [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 265 Score = 151 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 57/262 (21%), Positives = 94/262 (35%), Gaps = 12/262 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + F S L L++ + A L IK G L G+ F+ V NG GF+ Sbjct: 7 RRTFLFSALGLMLGTGIAGQAMAGEQLQKIKDSGTLNVGLEGTYPPFSFVDENGKLTGFE 66 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F AL+ + K + P AL SK++D++ + R+ + P Sbjct: 67 VEFSEALAKELG---VKAKIQPSKWDGILAALDSKRLDVVINQVTISEERKKKYDFSE-P 122 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 T Q ++ K I + L+G + V GT E L + +K ++ Sbjct: 123 YTVSGIQALVLKKNADTIKTAKDLTGKKVGVGLGTNYEQWLKENVPGAIVK----TYDDD 178 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 R DA D L AL++ ++ V D S+ A+ +G+ E Sbjct: 179 PSKIQDLSVGRIDAILVDR--LAALEMATKTKNKLVPAGDAFSRQESGIALRKGEPELQA 236 Query: 240 IVSWTHYAMVTAEELGITQKNI 261 + + L K Sbjct: 237 AIDKAIDKLRADGTLEKLSKKY 258 >gi|89899053|ref|YP_521524.1| extracellular solute-binding protein [Rhodoferax ferrireducens T118] gi|89343790|gb|ABD67993.1| extracellular solute-binding protein, family 3 [Rhodoferax ferrireducens T118] Length = 266 Score = 151 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 54/268 (20%), Positives = 103/268 (38%), Gaps = 16/268 (5%) Query: 1 MYKDFFVSILCLIILFFT--SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M F+ + L F + + +AS L DI+KRG L+ + T F+ + NG+ G Sbjct: 1 MKMSNFLPAILLACAGFAGVAATAHASTLDDIQKRGELRIAVQTQGPPFSMIDKNGERTG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 V+ + ++ + +L L+ AL S + D+L+ + TL R + Sbjct: 61 SSVELAKLMAKEMGVKAV---FLDLDWDGLLPALISGKADLLAADMTPTLARATKVAF-- 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + G +S + G I V G+T E F+ +K + Sbjct: 116 TKPFIYIGPVVAAKAGSKFTSTAACKAPGTKIAVLFGSTGEKLAKTVFEKGEIKSYKGGG 175 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + A + + D D SA+ ++P++++K PLA A Sbjct: 176 ---TLLLDAVKNGQADCLLNDSSAVAGQAAGYPA-GTFKVMPELLAKEPLAYATRYDS-- 229 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQV 264 ++++W + + G Q+N++ Sbjct: 230 -LDLLTWINLFIDQTTLDGRLQQNLDYW 256 >gi|71737270|ref|YP_272645.1| cystine transporter subunit [Pseudomonas syringae pv. phaseolicola 1448A] gi|71557823|gb|AAZ37034.1| cystine ABC transporter, periplasmic cystine binding protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|320322114|gb|EFW78210.1| cystine transporter subunit [Pseudomonas syringae pv. glycinea str. B076] gi|320330786|gb|EFW86760.1| cystine transporter subunit [Pseudomonas syringae pv. glycinea str. race 4] gi|330872001|gb|EGH06150.1| cystine transporter subunit [Pseudomonas syringae pv. glycinea str. race 4] Length = 265 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 57/262 (21%), Positives = 94/262 (35%), Gaps = 12/262 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + F S L L++ + A L IK G L G+ F+ V NG GF+ Sbjct: 7 RRTFLFSALGLMLGTGIAGQAMAGEQLQKIKDSGTLNVGLEGTYPPFSFVDENGKLTGFE 66 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F AL+ + K + P AL SK++D++ + R+ + P Sbjct: 67 VEFSEALAKELG---VKAKIQPSKWDGILAALDSKRLDVVINQVTISEERKKKYDFSE-P 122 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 T Q ++ K I + L+G + V GT E L + +K ++ Sbjct: 123 YTVSGIQALVLKKNADTIKTAKDLTGKKVGVGLGTNYEQWLKENVPGAIVK----TYDDD 178 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 R DA D L AL++ ++ V D S+ A+ +G+ E Sbjct: 179 PSKIQDLSVGRIDAILVDR--LAALEMATKTKNKLVPAGDAFSRQESGIALRKGEPELQA 236 Query: 240 IVSWTHYAMVTAEELGITQKNI 261 + + L K Sbjct: 237 AIDKAIDKLRANGTLEKLSKKY 258 >gi|167821099|ref|ZP_02452779.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei 91] Length = 240 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 38/231 (16%), Positives = 76/231 (32%), Gaps = 6/231 (2%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 + I + +A L I + V F + GF D A+ Sbjct: 1 MAIAAIASSLIATLHARTLKKIADTNRMTVSYRESAVPFCYLLTPHKAVGFSADLTDAVV 60 Query: 69 SAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 + +I Y+P+ + R L + D+ +T T R + + ++ Sbjct: 61 DDVRKKLKMPGLQIAYIPVTRQNRNPLLVNDTYDLEGGSTTNTAARGQDVSFSMN--LFY 118 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 G ++ K I + L+G ++ AG+T E + Y H++ + + Sbjct: 119 AGTRVLVKKASRIRGYADLAGKTVATAAGSTNENVIRKYAADHHLDIDVVPAKDYAAGPR 178 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + R D L+ ++ P + D + P + +GD Sbjct: 179 MVESDRTAVLALDDVLLFGMRANAADPELLEVAGDALQVEPRGCMVRKGDP 229 >gi|307300762|ref|ZP_07580537.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti BL225C] gi|306904296|gb|EFN34881.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti BL225C] Length = 271 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 43/257 (16%), Positives = 89/257 (34%), Gaps = 11/257 (4%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + +S+L I+ A + IK G +K G+ F + AN G+D D Sbjct: 11 RRTAISVLGAAIVAGLVAPAAAQTVETIKSAGTVKVGMLVDFPPFGIMDANNQPDGYDAD 70 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + L+ + + + +P+ R LQS Q+D+L + T R ++ + Sbjct: 71 VAKLLAKELGVE---VTIVPVTGPNRIPYLQSNQVDLLVASLGITEERAKNVDFSQ--PY 125 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 G ++ L+G +I V +T + + F+ Sbjct: 126 AGISIGVFGAADLAVTKPEDLAGKTIGVARASTQDTATTKIAPQ---DANIQRFDDDASA 182 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A + + + +S + A ++ P +S+ A+ +G +E V+ Sbjct: 183 VQALLSGQVELI--GVSNVVAAQIEAAAPGRFNQ-KLQLSQQVQGIAVRKGSSEMLKFVN 239 Query: 243 WTHYAMVTAEELGITQK 259 + +L + Sbjct: 240 GFLDKVKADGQLNAIHE 256 >gi|328882495|emb|CCA55734.1| amino acid ABC transporter solute-binding protein [Streptomyces venezuelae ATCC 10712] Length = 350 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 43/269 (15%), Positives = 86/269 (31%), Gaps = 17/269 (6%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFD 73 T + + + IK+RG L G++ + +GFD+D RA++ I Sbjct: 81 ASLTPSTADGPSIAAIKQRGKLVVGVDQSSYRWGYRNPETRSLEGFDIDLARAIAKDILG 140 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 + + + +R AL S ++D++ R R +AF + GQ + K Sbjct: 141 SEDAVIFRAIPTNQRIAALDSGKVDLVVRTMTINCKR--IQQVAFSTAYFQAGQQVLAPK 198 Query: 134 -KKGISSVS-QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE---------EI 182 + I+ L+G +C G+T L + K + + + Sbjct: 199 LAQDITGYDASLNGKRVCTAEGSTAYEALEEKSFGAVFKDEGDGTKDDKDLLTVPNQLDC 258 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A + + DA D + + + + A G+ + V+ Sbjct: 259 LARLQLGQVDAVVTDNALAAGQAAQDPA---VELKGRPFTTEFYGVAAKLGNDDLVRRVN 315 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNP 271 + + + T P Sbjct: 316 QVLVGYRQGPWQQAYRTWLEKDLPGITGP 344 >gi|257899739|ref|ZP_05679392.1| extracellular solute-binding protein [Enterococcus faecium Com15] gi|257837651|gb|EEV62725.1| extracellular solute-binding protein [Enterococcus faecium Com15] Length = 271 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 48/277 (17%), Positives = 92/277 (33%), Gaps = 14/277 (5%) Query: 1 MYKDFFVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K F+ L + +L F S +A I + + G++ V +G Sbjct: 1 MKKISFLFALFVGLLLFAGCSNKKASADNWAAINEEKKIVIGLDDTFVPMGFRDKDGKLT 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D +A+ + + P++ + L + ID++ T RE + Sbjct: 61 GFDIDLAKAVFEQYR---ITVDFQPIDWSMKEFELNNGTIDLIWNGYSKTPAREKKVQF- 116 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPI 174 + Q I K+ GI+S Q+ + Q G++ + K + Sbjct: 117 -TKPYMENDQVLITPKESGITSFEQMKNKRLGAQNGSSGYDVFTKQPEVLKEIVKNQDAV 175 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +++ E ++ R D D + + + A + + D Sbjct: 176 LYDSFNEALIDLKSGRIDGLLMDKVYADYYLKQRNELEDFNMTKGSYESEDFAVGVRKSD 235 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 V + A E+ G QK N+ + P Sbjct: 236 DTL---VKKINEAFDRLEKTGEFQKISNKWFGEDVTP 269 >gi|271963751|ref|YP_003337947.1| glutamine ABC transporter glutamine-binding protein [Streptosporangium roseum DSM 43021] gi|270506926|gb|ACZ85204.1| glutamine ABC transporter (glutamine-binding protein) [Streptosporangium roseum DSM 43021] Length = 269 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 86/248 (34%), Gaps = 7/248 (2%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 GI G + + +G +KGFDVD + ++ + K+++ + R Sbjct: 26 DSDKFVVGIKFDQPGLGQKQPDGSFKGFDVDVAKYVAKELGYTGDKVEFKEAISANRESF 85 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICV 150 +Q Q++I+ T R+ +G A GQ + I+SV L +C Sbjct: 86 IQQGQVNIVIATYSITDDRKKKIGFA--GPYLVTGQDILTRADDTTINSVDDLKDKKVCG 143 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 G+++ L D F + + + DA + D + L + Sbjct: 144 AQGSSSPKRLVDKFGDAWKGQYLTEQQGYGACLPLLENKQVDAISTDATILAGFATQS-- 201 Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT-QKNINQVSK-DT 268 P + ++ S+ + D + ++ M N + K T Sbjct: 202 PGKFRLVGKPFSEEKYGIGVKLDDKDTREKLNAAVEKMFKDGSWKKAVDANFGEFGKFFT 261 Query: 269 TNPDVQRF 276 T P V+R+ Sbjct: 262 TPPAVERY 269 >gi|330901940|gb|EGH33281.1| extracellular solute-binding protein [Pseudomonas syringae pv. japonica str. M301072PT] Length = 132 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 57/130 (43%), Positives = 81/130 (62%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L + + L IKK+GF++CG++ GL GF+ + G G D Sbjct: 3 MLKSTLAVVTALAAFGVIGAANAGTTLDAIKKKGFIQCGVSDGLPGFSVPDSTGKITGID 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D CRA+++A+F D +K+++ LNAKERF ALQS +IDILSRNT WT R+ +GL F Sbjct: 63 ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDAGMGLVFTG 122 Query: 121 ITYFDGQGFI 130 +TY+DG GF+ Sbjct: 123 VTYYDGIGFL 132 >gi|310766721|gb|ADP11671.1| Putative amino acid ABC transporter, substrate binding protein [Erwinia sp. Ejp617] Length = 261 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 44/229 (19%), Positives = 87/229 (37%), Gaps = 10/229 (4%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 A L DI+KRG L+ + F V + +G+D+D L+ + K+Q + Sbjct: 21 ARADQLQDIEKRGVLRVAVPQDFPPFGSVGTDLQPQGYDIDMATYLARQM---KLKLQLV 77 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 P+ + R LQ+ ++D++ + RE + + +F G ++ + S + Sbjct: 78 PVTSANRVPYLQTDKVDLVISSLGKNPEREKVIDFSRAYAPFF--LGVFGPQQGTLKSAA 135 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 +LSG S+ V G ++ L +E +AY + + + Sbjct: 136 ELSGKSVGVTRGAVEDMVLTSVVPK---DAQVKRYEDNNTTLSAYLSGQVQYVATGNLVV 192 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 A+ N + + ++ SP I +G+ V +T Sbjct: 193 AAIARQNADKA--PVAQFMLKDSPCFIGINKGEPALKAKVDALIAQALT 239 >gi|257461157|ref|ZP_05626255.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] gi|257441531|gb|EEV16676.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] Length = 267 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 50/271 (18%), Positives = 106/271 (39%), Gaps = 19/271 (7%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K F IL LF A+ L +I+ G ++ G+ G F+E+ + G ++GF++ Sbjct: 1 MKLLFTLILLCAGLF-------ANTLQEIRNSGVIRVGVRDGRPPFSEI-SGGKFEGFEI 52 Query: 62 DFCRALSSAIFD-DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 + A++ AIF ++Q++ L+A +R L + ++D+++ R+ + + Sbjct: 53 ELANAIAKAIFGAKQGEVQFVSLSAADRVSYLVNNKVDMVAATFVIDSARKNHVDFSM-- 110 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + G + K I +S+L + + GTT + +Y K + + Sbjct: 111 PYFSTNLGVLTRKADAIKDISRLRDMRLITEEGTT----VDNYLKKEKFT-NASYCKSTS 165 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E A R + D Y + A + +D V + + + +G+ E + Sbjct: 166 ECYAMIRDGKADGYVNLNITVLAYAVVDDT--LEVPFQNFGKPDFIGIGVQKGNKELLDF 223 Query: 241 VSWTHYAMVTAEEL-GITQKNINQVSKDTTN 270 ++ + Q + T + Sbjct: 224 INAELVKLSKEGFFKKAYQDTFEPFYRGTAD 254 >gi|119383776|ref|YP_914832.1| extracellular solute-binding protein [Paracoccus denitrificans PD1222] gi|119373543|gb|ABL69136.1| amino acid ABC transporter substrate-binding protein, PAAT family [Paracoccus denitrificans PD1222] Length = 281 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 53/265 (20%), Positives = 93/265 (35%), Gaps = 9/265 (3%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 + + LF +A L DI G L+CG+ A+G+ GFDV+ C +++ Sbjct: 23 IAALPLFLVGTPASADKLDDIVSSGALRCGVMLDFPPLGYRDASGNPAGFDVETCNDIAT 82 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 + P + + A +R AL S +DI+ T TL R ++ Sbjct: 83 QLGVKP---EIVETQAPQRVPALVSGTVDIVVGGTTPTLERAKTVTF--TDPYNVGKLVV 137 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 + IS +L G S+ + GT E + + E A R Sbjct: 138 VTGSANKISGFDELKGKSVALVRGTLPETAYLAACNGWSEGCKNLSLANNAEQITAVRQG 197 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 R +A S + ALK + + + A+ +G+ + W + + Sbjct: 198 RANAMIETNSFMSALKASPQGVDLEICCNVPGFTDWTSIAVPKGEYGLRD---WLNLFIF 254 Query: 250 TAEELGITQKNINQVSKDTTNPDVQ 274 + G + + T P +Q Sbjct: 255 WQVDSGRYAELYQKYYG-TDAPSLQ 278 >gi|254387277|ref|ZP_05002537.1| glutamate binding periplasmic protein [Streptomyces sp. Mg1] gi|194346082|gb|EDX27048.1| glutamate binding periplasmic protein [Streptomyces sp. Mg1] Length = 276 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 46/263 (17%), Positives = 95/263 (36%), Gaps = 14/263 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M ++ I + T+ I GI G + +G + GFD Sbjct: 9 MKVSKAGAVAATIAVALTASGCAEDAKEPIA------IGIKFDQPGIGFREQDGTFTGFD 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD ++ + ++I++ + + +R L +Q ++D ++ + + R+ + A Sbjct: 63 VDVATYVAKQLGYKANEIEFKQVFSSDRELLIQYNEVDFVAASYSISDKRKEKVDFA--G 120 Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Q ++ ++ L+ +C G+T+ A+ KA K + E Sbjct: 121 PYFIAHQDLLVRADDASVTKAEDLNSKKLCSVTGSTS----AEKVKALAPKASVMELEGY 176 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A + DA T D S L + + ++ +S + +G+ E Sbjct: 177 SECLVAVQDGSADAMTTDNSILAGYAARKENAGKFKLIGLSLSNENYGIGVKKGNKELQK 236 Query: 240 IVSWTHYAMVTAEE-LGITQKNI 261 ++ MVT +KN Sbjct: 237 KINAALTKMVTDGSWEAAVKKNF 259 >gi|295681020|ref|YP_003609594.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] gi|295440915|gb|ADG20083.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] Length = 266 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 53/271 (19%), Positives = 95/271 (35%), Gaps = 15/271 (5%) Query: 4 DFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 ++ L + FT+ + +A +L +K+ G LK G+ F +G +GFDVD Sbjct: 5 KLLINALAISAFSFTAVAAHAEDLLDSVKQAGVLKIGLEGTYPPFDSRNKDGQLEGFDVD 64 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 +A+++ + P +++P ALQS + D++ T R+ L + P T Sbjct: 65 VAKAVAAKLGVKP---EFIPTEWSGIIAALQSGKFDVIINQVTITPQRKQVLDFSQ-PYT 120 Query: 123 YFDGQGFI-MHKKKGISSVSQLSG-ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y Q K+ S+ + G I V GT D + + Sbjct: 121 YSAAQLIQRADDKREFKSLDEFKGDKKIGVTLGTNY-----DQMARAVPGINVQTYPGAP 175 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E A R DA D L + + P + + + + + ++ Sbjct: 176 EKLRDLAAKRIDATIDDRLMLPYIIKNSQLPLRTGAVLKGADQE-MGIPFRKDNPKFAKA 234 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + M L ++ D T P Sbjct: 235 LDDALTQMKQDGTLKKIS--MHWFGTDVTQP 263 >gi|257054837|ref|YP_003132669.1| periplasmic component of amino acid ABC-type transporter/signal transduction system [Saccharomonospora viridis DSM 43017] gi|256584709|gb|ACU95842.1| periplasmic component of amino acid ABC-type transporter/signal transduction system [Saccharomonospora viridis DSM 43017] Length = 278 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 54/257 (21%), Positives = 98/257 (38%), Gaps = 12/257 (4%) Query: 1 MYK-DFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M + V+++ + L +T A SI+ G L GI G AE +G+ Sbjct: 3 MRRLRCLVNVVVVSALLAACSATEAAPDSIVTRASDTGSLTIGIGVDQPGLAERTMDGNV 62 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFD D R +++ + I + A ER AL S ++D++ T R+ + Sbjct: 63 VGFDADVARFVAAELGVPEGNITWKETLASEREKALASGEVDLVVAAYSVTERRQREVSF 122 Query: 117 AFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 A GQ ++H+ ++ + L+G ++C G+T+ + F + Sbjct: 123 A--GPYLEVGQDLLIHRNSTHLTDPAALAGHTVCSPTGSTSAAHVRKRF---GDAVRLVE 177 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + RV E A A R DA D + L + P + + + + D Sbjct: 178 YPRVSECVTALLAQRVDAVATDDAILAGYVA--ENPELLRLAGHRWAVENYGIGLPKNDR 235 Query: 236 EWYNIVSWTHYAMVTAE 252 + V+ M+ + Sbjct: 236 DGQAAVNDAIRTMIDSG 252 >gi|171059885|ref|YP_001792234.1| extracellular solute-binding protein [Leptothrix cholodnii SP-6] gi|170777330|gb|ACB35469.1| extracellular solute-binding protein family 3 [Leptothrix cholodnii SP-6] Length = 263 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 49/271 (18%), Positives = 98/271 (36%), Gaps = 12/271 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + +S++ + + + A + L + R + + T + V + +G D Sbjct: 3 RRPLVMSVVLGLSALLSPLAVQAQAALDTVMSRKLINIAVPTDFPPYGFVGIDLKPQGLD 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +++ + KI+ +P+ + R LQ+K+ D++ RE + Sbjct: 63 VDMANLIAAKLG---VKIELIPVTSANRIPYLQTKKADLVISTLGKNAEREKVIDFTAAY 119 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +F Q K I S + L+G ++ V G ++ L A FE Sbjct: 120 SPFF--QAVFAAKGVAIKSPADLAGKTVAVTRGAIEDMELTKLAPA---GADIKRFEDNN 174 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +A+ + + A S A + P ++ SP + +G+ + Sbjct: 175 ATVSAFVSGQVQAIATGASV--AGNMMQRSPQLGAEYKFLLKDSPNFIGVGKGEDKLRLK 232 Query: 241 VSWTHYAMVTAEELGITQ-KNINQVSKDTTN 270 V+ A A EL K + + + D N Sbjct: 233 VNEIIAAAKAAGELDKMAVKWLGRPAGDLPN 263 >gi|86360224|ref|YP_472113.1| amino acid ABC transporter substrate-binding protein [Rhizobium etli CFN 42] gi|86284326|gb|ABC93386.1| probable amino acid ABC transporter, substrate-binding protein [Rhizobium etli CFN 42] Length = 278 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 41/272 (15%), Positives = 95/272 (34%), Gaps = 16/272 (5%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFC 64 ++S+ + A L I L+C + FA + GFDVD C Sbjct: 5 YLSLTVAFAGMAAAVPAKADQLDTIMSAKTLRCATFADVPPFASPDPKTREMAGFDVDLC 64 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 A++ + K + P++ + R ++ ++DI N +TL R + Y Sbjct: 65 GAIAKELG---VKAEIKPVSVEARVPEVKLGRVDITVANLAYTLSRAEQIQF--SDPYYL 119 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 + I+ S + +G I G+T+E+++ K P+ F+ Sbjct: 120 AKEMLIVPADDAGKSKADYAGQRIASTKGSTSEMSIK------LNKSEPLTFQDTASAYL 173 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHV-ILPDIISKSPLAPAIIQGDTEWYNIVSW 243 A + + + + + + ++ + + P+ + + + ++ Sbjct: 174 AVQQGKARGMVANTMTTTKFVNESKSKGKEMRMIEEPMLYQPIGIGMAKDQPKLTAKINE 233 Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 + + + E+ K ++ T + R Sbjct: 234 ILHKLDASGEIN---KIWDKWLGPNTEYKMTR 262 >gi|323498511|ref|ZP_08103504.1| hypothetical protein VISI1226_09569 [Vibrio sinaloensis DSM 21326] gi|323316400|gb|EGA69418.1| hypothetical protein VISI1226_09569 [Vibrio sinaloensis DSM 21326] Length = 262 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 50/251 (19%), Positives = 94/251 (37%), Gaps = 18/251 (7%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + IL DIK G LK ++G + F NG + GFD+D + ++ AI ++Y Sbjct: 18 ALADPILDDIKSSGELKVCFDSGYMPFEMTAKNGQYIGFDIDLGKQMARAIG-----VKY 72 Query: 81 LPLN--AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 +P+N L + + ++ T R I + A + + I+ Sbjct: 73 VPVNTAWDGIIPTLLTGKCHMIMGGMTITPKRNIQVNFADPYVVIGQSILLDPKHEGKIT 132 Query: 139 SVSQLSGAS--ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 L+ A + + GTT E + Y ++E E + DA+ Sbjct: 133 DYRDLNSAEFVVATKLGTTGEQAIKRYLPKA----KVNLYETQSEAVLEVANGKVDAFIY 188 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 D+ + + + + V L + + PL A+ QG+ + N ++ + G Sbjct: 189 DLP--FNAIYSAENKGQLVHLAEPFTYEPLGWAVPQGNPDTINFLNGYLRQIKG---DGT 243 Query: 257 TQKNINQVSKD 267 + N+ D Sbjct: 244 YDRIYNKWFND 254 >gi|261820369|ref|YP_003258475.1| extracellular solute-binding protein family 3 [Pectobacterium wasabiae WPP163] gi|261604382|gb|ACX86868.1| extracellular solute-binding protein family 3 [Pectobacterium wasabiae WPP163] Length = 274 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 48/244 (19%), Positives = 91/244 (37%), Gaps = 12/244 (4%) Query: 11 CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70 + F +A +L I RG + N A ++++G+ KG +D + Sbjct: 6 VALAASFIPTIAHADVLEKIADRGVISVCTNVNNPPLAFLESSGETKGLHIDLLNDFTQR 65 Query: 71 I---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + K+ +P+ R LQ + DIL + + R+ + P Y G Sbjct: 66 LSTQLGKTVKVDLVPVLPANRVQFLQQGKCDILFTSLTVSEERKKLVQF-VEPYYYAAGP 124 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 + K S+ ++ G +IC G++ + L F A+ + F+ +E+D + R Sbjct: 125 ALLTKKGVTFSNWEEVKGKAICSNQGSSWNVPLEQKFGAN-----IVAFQTQQEVDQSLR 179 Query: 188 AHRCDAYTGDISALYALKLTNDR---PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 RC A D S L A L + + ++ P A+ + ++ +S Sbjct: 180 DGRCAALVSDDSYLQARFLNDKEGIWKDYFIQNLTPFTEGPWGLAVRFNEPQFTQFISSV 239 Query: 245 HYAM 248 Sbjct: 240 IKDW 243 >gi|170721100|ref|YP_001748788.1| extracellular solute-binding protein [Pseudomonas putida W619] gi|169759103|gb|ACA72419.1| extracellular solute-binding protein family 3 [Pseudomonas putida W619] Length = 261 Score = 151 bits (382), Expect = 2e-34, Method: Composition-based stats. Identities = 48/269 (17%), Positives = 100/269 (37%), Gaps = 15/269 (5%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F S+ C L + A L DI RG LK + F V + +G D+D Sbjct: 8 FLASLFCSSALML--PTAQADALADISARGVLKVAVPQDFPPFGSVGPDLKPRGLDIDTA 65 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 + L+ + K+ P+N+ R L + ++D++ + R + + ++ Sbjct: 66 QLLADKLG---VKLALTPVNSTNRIPFLTTGKVDLVISSLGKNPERAAVIDFSRPYAPFY 122 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 + I+ + ++G +I V G+ ++ L+ FE A Sbjct: 123 --LAVFGPAEVDIAGIDAVAGKTISVTRGSIEDMELSAVAPK---GAVIKRFEDNNSTIA 177 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 AY + + + + A+ P++ ++ + SP+ + + + + V+ T Sbjct: 178 AYLSGQVELIASGSVVMAAIA--QKNPAKVPVVKVKLKDSPVYVGLAKNEPALLDKVNAT 235 Query: 245 HYAMVTAEELGITQKNINQVSKDTTNPDV 273 A A+ G +N + K D+ Sbjct: 236 LEA---AKADGSLNRNAEKWLKQPLPADL 261 >gi|237798051|ref|ZP_04586512.1| cystine transporter subunit [Pseudomonas syringae pv. oryzae str. 1_6] gi|331020902|gb|EGI00959.1| cystine transporter subunit [Pseudomonas syringae pv. oryzae str. 1_6] Length = 265 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 55/262 (20%), Positives = 90/262 (34%), Gaps = 12/262 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + F S L L++ + A L IK G L G+ F+ V NG GF+ Sbjct: 7 RRTFLFSALGLMLGTGIAGQAMAGEQLQKIKDSGTLNVGLEGTYPPFSFVDENGKLTGFE 66 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F AL+ + K + P AL+SK++D++ + R+ + P Sbjct: 67 VEFSEALAKELG---VKAKIQPSKWDGILAALESKRLDVVINQVTISDERKKKYDFSE-P 122 Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 T Q ++ K I S L G + V GT E L + ++ Sbjct: 123 YTISGIQALVLKKNADAIKSADDLKGKKVGVGLGTNYEQWLKEKVPGAI----VRTYDDD 178 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 R D D L AL++ ++ V S+ A+ +G+ E Sbjct: 179 PTKIQDLSVGRIDVILVDR--LAALEMATKTKNKLVPAGVAFSRQESGIAMRKGEPELQA 236 Query: 240 IVSWTHYAMVTAEELGITQKNI 261 + + L K Sbjct: 237 AIDKAIDKLRADGTLEKLSKKY 258 >gi|330836288|ref|YP_004410929.1| amino acid ABC transporter substrate-binding protein, PAAT family [Spirochaeta coccoides DSM 17374] gi|329748191|gb|AEC01547.1| amino acid ABC transporter substrate-binding protein, PAAT family [Spirochaeta coccoides DSM 17374] Length = 268 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 48/287 (16%), Positives = 98/287 (34%), Gaps = 28/287 (9%) Query: 1 MYKDFFVSILCLIILFFTSF----STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K + ++ L + + S S L I+ RG G++ N + Sbjct: 1 MKKTLALCVMILAAVSLFAAGSKESGEDSSLKKIQDRGTFILGLDDTFPPMGFRNENNEI 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFD+D R ++ + P++ + L + +ID + T R+ + Sbjct: 61 VGFDIDLAREVTKRMGVTLL---LQPIDWNAKEQELNTGKIDCIWNGFTVTEERKKVVNF 117 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + + Q ++ +++++ L+G SI +QAG++ + + F Sbjct: 118 SE--PYLENAQVAVVKTSSAVTTLADLAGKSIGLQAGSSASNAVDAAPVFKASLKGIVEF 175 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + DA D L A + IL + ++ A + D Sbjct: 176 KENLTALMDLEIGGVDAVIVD--LLVANDNIKRSGKDFRILDESLAPENYAIGFRKNDNA 233 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ-RFLGIDKS 282 N V QK+++ ++ D T + + G D + Sbjct: 234 LRNAV----------------QKHLDDMAADGTMARISTTWFGADIT 264 >gi|289674587|ref|ZP_06495477.1| cystine transporter subunit [Pseudomonas syringae pv. syringae FF5] gi|330938696|gb|EGH42254.1| cystine transporter subunit [Pseudomonas syringae pv. pisi str. 1704B] Length = 265 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 54/262 (20%), Positives = 94/262 (35%), Gaps = 12/262 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + F S + L++ + A L IK G L G+ F+ V +G GF+ Sbjct: 7 RRTFLFSAMGLMLSAGIAGQAMAGEQLQKIKDSGTLNVGLEGTYPPFSFVDESGKLTGFE 66 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F AL+ + K + P AL SK++D++ + R+ + P Sbjct: 67 VEFSEALAKELG---VKAKIQPSKWDGILAALDSKRLDVVINQVTISDERKKKYDFSE-P 122 Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 T Q ++ K I S L+G + V GT ++ KA+ ++ Sbjct: 123 YTVSGIQALVLKKNEDAIKSAKDLTGKKVGVGLGT----NYEEWLKANVPGAIVKTYDDD 178 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 R DA D L AL++ ++ V D S+ A+ +G+ E Sbjct: 179 PSKIQDLSVGRIDAILVDR--LAALEMAAKTKNKLVPAGDAFSRQESGIALRKGEPELLA 236 Query: 240 IVSWTHYAMVTAEELGITQKNI 261 + + L + Sbjct: 237 AIDKAIDKLRADGTLKKLSEKY 258 >gi|154148689|ref|YP_001406380.1| polar amino acid ABC uptake transporter substrate binding protein [Campylobacter hominis ATCC BAA-381] gi|153804698|gb|ABS51705.1| polar amino acid ABC uptake transporter substrate binding protein [Campylobacter hominis ATCC BAA-381] Length = 271 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 51/253 (20%), Positives = 101/253 (39%), Gaps = 16/253 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L +L NA+ L +I+ L+ G+ F+++K++G+++GF+ Sbjct: 1 MKKFLIFLVLAFSLL-------NANSLNEIRSSKTLRVGVYDAQPPFSQLKSSGEFEGFE 53 Query: 61 VDFCRALSSAIFDD-PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 + F + ++ IF + +++ ++A +R LQ +D++ T R + + F Sbjct: 54 IGFAKEIAKGIFGESGGNVEFKAVSANDRIKFLQDNSVDLVIATLTITDER--AKLVDFS 111 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G + K I SQL I Q G T E DYFK Sbjct: 112 NPYFAVNIGVLTRKDDEIKEFSQLKNKIIITQKGGTAE----DYFKNLGFNVMTCDNGAA 167 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + + D++ A + + S V + ++ + L + +G+ E N Sbjct: 168 GCYKLLKQTPNAIGFADDVTVALAYAVIDK--SVEVNVKNLGASDFLGIGVQKGNKELLN 225 Query: 240 IVSWTHYAMVTAE 252 +V+ + E Sbjct: 226 VVNDELIKLSKEE 238 >gi|260460786|ref|ZP_05809036.1| extracellular solute-binding protein family 3 [Mesorhizobium opportunistum WSM2075] gi|259033363|gb|EEW34624.1| extracellular solute-binding protein family 3 [Mesorhizobium opportunistum WSM2075] Length = 260 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 49/262 (18%), Positives = 90/262 (34%), Gaps = 13/262 (4%) Query: 1 MYKDFFVSILCLIILF--FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + F + ++L FT+ S A L IK G LK ++ F V + G Sbjct: 1 MNRVFSGIAVAALLLASTFTAVSAKADDLEKIKAAGELKISMSGQYPPFNFVNDQNEVVG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD D +A++ I + + L + + D + + T RE + Sbjct: 61 FDADIGKAIAERIGVKGT---IITTAWDGIIAGLLANKYDTVVGSMTITPEREKVVDF-- 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y G+ +++ + S+ +L G ++ V G T E + + ++ Sbjct: 116 VGPYYHAGRAVFVNQDSKVQSLDELKGKTLGVTLGETHEKWARE-----QGGWDIRTYKG 170 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS-PLAPAIIQGDTEW 237 + E+ +A R DA D + + PDI S + AI + + Sbjct: 171 LPELLLELKAGRVDAIVVDNIPVMVAVKETGEKVRKLDTPDIEGGSVAIGIAIRKDNPAL 230 Query: 238 YNIVSWTHYAMVTAEELGITQK 259 + M+ K Sbjct: 231 KAAMQKALDEMMADGTYEKISK 252 >gi|158423460|ref|YP_001524752.1| polar amino acid ABC transporter periplasmic substrate-binding protein [Azorhizobium caulinodans ORS 571] gi|158330349|dbj|BAF87834.1| polar amino acid uptake family ABC transporter periplasmic substrate- binding protein [Azorhizobium caulinodans ORS 571] Length = 347 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 49/263 (18%), Positives = 102/263 (38%), Gaps = 21/263 (7%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 + + +A +L IK++G L G+ F +G G + D ++ + K Sbjct: 94 GTVAASADVLDKIKEKGVLTVGVKADYKPFGFRDPSGAIVGIEPDLAADVAKRLG---VK 150 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KG 136 ++ +P+ + R LQ +ID++ R + LA P Y D ++ KK K Sbjct: 151 LELVPVVSANRIEFLQQGKIDLMIATMSDKPER-RKVVLAIDPPYYSDAVNILLSKKVKN 209 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 ++ L G +C +G ++ + A F+ E+ A + C Y Sbjct: 210 VTKWEDLKGKVLCGTSGAWYNKDVSTKYGA-----EVKAFDGSEKPLFALKGGECIGYLY 264 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV-----SWTHYAMVTA 251 D + + L + +++ + + ++P A+ G+ ++ + W + Sbjct: 265 DQTFIQGKLLDAEWTADYAMPLPGVMEAPWILAVAPGEDKFAKFMTDTTLDWMKTGFIVN 324 Query: 252 EE--LGI----TQKNINQVSKDT 268 EE GI K +++ K + Sbjct: 325 EEKKWGIEPTDYSKRMHEEKKGS 347 >gi|299066293|emb|CBJ37477.1| putative cystine transporter subunit; periplasmic-binding component of ABC superfamily (fliY) [Ralstonia solanacearum CMR15] Length = 267 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 40/248 (16%), Positives = 86/248 (34%), Gaps = 11/248 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 +A L +I+K G ++ I F + A+ +G+D+D L+ + Sbjct: 23 LLPGRPAHADALANIQKAGVIRVAIPNDFPPFGSLGADLKLQGYDIDMANLLAKELG--- 79 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 K + +P+ + R L + ++D++ + R + + K Sbjct: 80 VKAELVPVTSTNRIPFLTTGKVDVVISSLGKNAERAKVIDFTQAYAPFPKS--VYGPKDV 137 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I + + L+G +I V G+T +L L A +E +Y + T Sbjct: 138 SIKTPADLAGKTIGVTRGSTEDLALTAVAPA---SATIKRYEDNNATAQSYLIGQVQLVT 194 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL- 254 A + + + + +P + +G+ V+ + + L Sbjct: 195 LGNIV--ANAVNERTRLRQLDVKFPVEDTPCYVGVAKGEPALLEKVNAAITKLKSDGRLN 252 Query: 255 GITQKNIN 262 G++Q I Sbjct: 253 GLSQHWIK 260 >gi|254250416|ref|ZP_04943735.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Burkholderia cenocepacia PC184] gi|124879550|gb|EAY66906.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Burkholderia cenocepacia PC184] Length = 280 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 52/239 (21%), Positives = 89/239 (37%), Gaps = 13/239 (5%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDP 75 F+ + S L I +R + G+ F + A GF+VD ++ + D Sbjct: 23 FSGVARADSTLDRIHQRHKIAIGVILSGPPFGSLDPATQKPVGFNVDLANDVAKRLGVD- 81 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY-FDGQGFIMHKK 134 ++ P+ R LQ ++D L N + T R + L++ P + F G I K Sbjct: 82 --VELTPVQPSNRVQFLQQGKVDALIANMELTTER--AEILSYAPTPFEFIGGALIARKD 137 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 GI + + + G +CV G+ LA + A F E A R + C A Sbjct: 138 SGIKTWADVRGKPVCVSQGSNYTKPLATEYGAQ-----VKAFRGQPESLLALRGNNCVAA 192 Query: 195 TGDISALYALKLTNDRPSEHVI-LPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 L L N ++ LP + SP + +G+T+ + + + Sbjct: 193 VHVAPTLRMLVARNPDWKDYATPLPTDLIPSPAVIWVRKGETDTQSALDRIVQDWHRSG 251 >gi|187780001|ref|ZP_02996474.1| hypothetical protein CLOSPO_03597 [Clostridium sporogenes ATCC 15579] gi|187773626|gb|EDU37428.1| hypothetical protein CLOSPO_03597 [Clostridium sporogenes ATCC 15579] Length = 278 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 51/281 (18%), Positives = 92/281 (32%), Gaps = 25/281 (8%) Query: 1 MYKDFFV--SILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K + S++ I L T+ + L IK+ G + G++ Sbjct: 11 MKKTLLLVSSVILSIALLGGCGKTDKKLNSLEKIKEAGKITVGLDDSYPPMEFRDKENKL 70 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFD+D + + K +Y + LAL S + D++ T R+ ++ Sbjct: 71 VGFDIDLGNEIGKKLG---VKTEYTTTDFNGILLALNSGKFDVIISGLSITDKRKEAIDF 127 Query: 117 AFRPITYFDGQGFI------MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 + GQ I+ +S L +I Q G+T + + Sbjct: 128 SE--PYVMGGQVIAINKNNNTINNNTINKLSDLKDKTIGCQLGSTGDKAATEI----KGL 181 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 ++++ E A R DA D + ++ +L + +SK P+ Sbjct: 182 KETKRYDKITEAFHELIAGRIDAVIMDAQV--GGYYISKEKDKYKVLEETVSKEPMGIGF 239 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQK-NINQVSKDTTN 270 + D E V +E G K +I D Sbjct: 240 KKEDKELKEAVQKALN---ELKEDGTLSKLSIKWFGFDAYK 277 >gi|153953603|ref|YP_001394368.1| extracellular amino acid-binding protein [Clostridium kluyveri DSM 555] gi|219854225|ref|YP_002471347.1| hypothetical protein CKR_0882 [Clostridium kluyveri NBRC 12016] gi|146346484|gb|EDK33020.1| Extracellular amino acid-binding protein [Clostridium kluyveri DSM 555] gi|219567949|dbj|BAH05933.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 269 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 52/274 (18%), Positives = 97/274 (35%), Gaps = 20/274 (7%) Query: 2 YKDFFVSILCLI--ILFFTSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAEVKANG 54 +K VS++ +I + FT N+ + L +KK G LK G+ + Sbjct: 4 FKKAIVSLVMIIFTVALFTGCGNNSGNETQNSLEKVKKAGVLKIGLEDSFPPMEFRDSKN 63 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 +GFDVD A+ + K +++ LAL+S + D++ R+ + Sbjct: 64 VLQGFDVDMANAIGEKLG---VKTEFVGTEFNGIVLALKSGKFDVIISGLSIDEDRKKEI 120 Query: 115 GLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + + Q I + I + L G + V GTT+E + Sbjct: 121 DFSE--PYIENSQIIITKVENDTIKTSKDLEGKIVGVGLGTTSEKVAKEL----TGLKEV 174 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 +++ E R DA D +D+ ++ +L + ++ P+ +G Sbjct: 175 KKYDKTTEELQDLLIGRIDAVIVDEPVGKYYISADDKKGKYTVLNEKLTSEPMGIGFRKG 234 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 D E V +E G K + + Sbjct: 235 DKELEEAVQRAVN---ELKEDGTMSKISAKWFGE 265 >gi|317125234|ref|YP_004099346.1| amino acid ABC transporter substrate-binding protein [Intrasporangium calvum DSM 43043] gi|315589322|gb|ADU48619.1| amino acid ABC transporter substrate-binding protein, PAAT family [Intrasporangium calvum DSM 43043] Length = 274 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 45/275 (16%), Positives = 98/275 (35%), Gaps = 25/275 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTN-----ASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 + + V+I + L + ++ A+ +K GI G +K Sbjct: 3 LRRTSAVAIATVAALGLAACGSDGGNSGAAGGDKVK------VGIKFDQPGLG-LKTGAT 55 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + GFDVD ++ + D ++++ + +R L++ Q+ + T R + Sbjct: 56 YSGFDVDVANFIAKELNLD---VEFVEAVSAQRETLLKTGQVKYIVGTYSITEKRMADVS 112 Query: 116 LAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 A + GQ ++ I+ L G +C G+T+ + D + Sbjct: 113 FA--GPYFIAGQDLLVRSDDTSITGKDTLDGKKLCSVKGSTSAQKIKDEIP----GVNLQ 166 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + A ++ DA T D + L + + ++ + S + +GD Sbjct: 167 EYNTYSLCVDALKSGAVDALTTDDTILAGYAAQDTNKGKLKVVGNKFSTENYGVGVKKGD 226 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 TE+ N V + + G Q+++++ Sbjct: 227 TEFCNQVVTALKKFI---DEGKWQESVDKWLGPAN 258 >gi|166366371|ref|YP_001658644.1| extracellular solute-binding protein [Microcystis aeruginosa NIES-843] gi|166088744|dbj|BAG03452.1| extracellular solute-binding protein [Microcystis aeruginosa NIES-843] Length = 299 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 60/308 (19%), Positives = 120/308 (38%), Gaps = 24/308 (7%) Query: 1 MYKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K V + C++ +F S S +++ + + GFL G + ++ + G+ G+ Sbjct: 1 MKKILQLVGLGCILPMFLASASLAETVVEKVARTGFLTVGTRFDAIPYSYIDDKGELVGY 60 Query: 60 DVDFCRALSSAI---FDDPSKIQYLPLN-AKERFLALQSKQIDILSRNTDWTLLREISLG 115 +D + + P +Q + N E+ ++S +IDI +T +T R + Sbjct: 61 SMDVLERIRKRLETRLGRPVTLQMIEANQPGEKINLIRSGEIDIAC-STAFTWERAKVVD 119 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + G + K +S+ L G I + + + + Sbjct: 120 FSISYS--ISGIRILAKKGSNLSTPQSLIGKRIALVPTSAAVDVIKLVQPQATI---VTT 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI-ISKSPLAPAIIQGD 234 + VEE A + + DA GD +L L D P + I+P+ ++ +A + + + Sbjct: 175 YSTVEEAIEALKTGKIDAIAGDSISLAGTILR-DNPKIYEIVPEEALANFGIACMVPENN 233 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKD 294 + + + V+ YA+V + IT T + R+ G I L L Sbjct: 234 STFLDDVN---YAIVKMMQDYITNDT-------ATVSQIDRWFGSQGMVPIPPEL-LKGF 282 Query: 295 WTYRIIRH 302 + +++I H Sbjct: 283 FAFKVIEH 290 >gi|330862548|emb|CBX72703.1| hypothetical protein YEW_JG40510 [Yersinia enterocolitica W22703] Length = 193 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 33/166 (19%), Positives = 73/166 (43%), Gaps = 6/166 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L +++ + + A L I++RG L+ + F V + +G+D Sbjct: 3 MKKRML-ALLGAVLILVQAPAVLADQLEKIQQRGVLRVAVPQDFPPFGSVGTDLQPQGYD 61 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D L+ + K+Q +P+ + R LQ+ ++D++ + RE ++ + Sbjct: 62 IDMAHYLADKM---KLKLQLVPVTSANRVPYLQTDKVDLVISSLGKNPEREKAIAFSRAY 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 +F G K+ + QL+G ++ V G ++ L++ Sbjct: 119 APFF--LGVFGAKEDALKQPEQLAGKTVGVTRGAVEDMVLSELAPK 162 >gi|330899980|gb|EGH31399.1| cystine transporter subunit [Pseudomonas syringae pv. japonica str. M301072PT] Length = 265 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 54/262 (20%), Positives = 94/262 (35%), Gaps = 12/262 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + F S + L++ + A L IK G L G+ F+ V +G GF+ Sbjct: 7 RRTFLFSAMGLMLGAGIAGQAMAGEQLQKIKDSGTLNVGLEGTYPPFSFVDESGKLTGFE 66 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F AL+ + K + P AL SK++D++ + R+ + P Sbjct: 67 VEFSEALAKELG---VKAKIQPSKWDGILAALDSKRLDVVINQVTISDERKKKYDFSE-P 122 Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 T Q ++ K I S L+G + V GT ++ KA+ ++ Sbjct: 123 YTVSGIQALVLKKNEDAIKSAKDLTGKKVGVGLGT----NYEEWLKANVPGAIVKTYDDD 178 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 R DA D L AL++ ++ V D S+ A+ +G+ E Sbjct: 179 PSKIQDLSVGRIDAILVDR--LAALEMAAKTKNKLVPAGDAFSRQESGIALRKGEPELLA 236 Query: 240 IVSWTHYAMVTAEELGITQKNI 261 + + L + Sbjct: 237 AIDKAIDKLRADGTLKKLSEKY 258 >gi|110636302|ref|YP_676510.1| extracellular solute-binding protein [Mesorhizobium sp. BNC1] gi|110287286|gb|ABG65345.1| amino acid ABC transporter substrate-binding protein, PAAT family [Chelativorans sp. BNC1] Length = 260 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 45/260 (17%), Positives = 97/260 (37%), Gaps = 14/260 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + +L + L ++ A L I+ RG + I+T + + + N G+D Sbjct: 1 MKQLLCTFMLAVAALVGSAPLAAAQTLEAIESRGKVLIAIDTAVPPYGMLDENMQPVGYD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + ++ + + ++ +P+ R L+S + D++ T R ++ Sbjct: 61 VDMAKMIAQDLGVE---LEIVPVTGPNRIAYLESNRADMVISTFGVTPERAKTVNFT--- 114 Query: 121 ITYFDGQ-GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I Y Q K + SS++ LSG + V G+ + + +E Sbjct: 115 IPYGANQIWIFGQKGEAASSIADLSGKPVAVVRGSIQDNVVTRMLPDA----VIRRYEDD 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 A+ + + L KL + ++ +P + + +GD E+ + Sbjct: 171 ATAATAFLSGQVPFIAT--GTLIGDKLVARDTENYER-KLLLGLNPYSIGLRKGDLEFLH 227 Query: 240 IVSWTHYAMVTAEELGITQK 259 +++ Y+ +L K Sbjct: 228 LINTFIYSYRLGGQLNELSK 247 >gi|121604395|ref|YP_981724.1| extracellular solute-binding protein [Polaromonas naphthalenivorans CJ2] gi|120593364|gb|ABM36803.1| amino acid ABC transporter substrate-binding protein, PAAT family [Polaromonas naphthalenivorans CJ2] Length = 268 Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 43/245 (17%), Positives = 85/245 (34%), Gaps = 11/245 (4%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 + + +A + DIKK+G L G+ + + ++ G+D D R L+ + K+ Sbjct: 27 APAASAQSVADIKKKGELTVGMLVDFPPYGTMNSSNQPDGYDADVARLLAKDLG---VKV 83 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 +P+ R L + ++D+L + T R + KK + Sbjct: 84 NLVPVTGPNRIPFLLTNKVDLLVASLAVTPERAKQVQF--SKPYAAASIVLYGDKKASLK 141 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + + L G + V +T ++ L F+ A + + DA Sbjct: 142 APADLKGKRVGVARASTQDIALTAAAPE---GTEIRRFDDDASAMQALLSGQIDAI--GC 196 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-IT 257 S A ++ P+ ++ + + A+ G E V EL + Sbjct: 197 STTVAAQIAKRAPANTFENKFVLRQQVMGVAMRPGQAELLKTVDDFVARNTANGELNKLY 256 Query: 258 QKNIN 262 QK + Sbjct: 257 QKWLE 261 >gi|76819835|ref|YP_336270.1| glutamate/aspartate periplasmic binding protein [Burkholderia pseudomallei 1710b] gi|167829459|ref|ZP_02460930.1| glutamate/aspartate periplasmic binding protein precursor [Burkholderia pseudomallei 9] gi|226196913|ref|ZP_03792491.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei Pakistan 9] gi|237509750|ref|ZP_04522465.1| glutamate/aspartate periplasmic-binding protein [Burkholderia pseudomallei MSHR346] gi|254265446|ref|ZP_04956311.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei 1710a] gi|76584308|gb|ABA53782.1| glutamate/aspartate periplasmic binding protein precursor [Burkholderia pseudomallei 1710b] gi|225930896|gb|EEH26905.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei Pakistan 9] gi|235001955|gb|EEP51379.1| glutamate/aspartate periplasmic-binding protein [Burkholderia pseudomallei MSHR346] gi|254216448|gb|EET05833.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei 1710a] Length = 240 Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 37/217 (17%), Positives = 73/217 (33%), Gaps = 6/217 (2%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKI 78 +A L I + V F + GF D A+ + +I Sbjct: 15 HARTLKKIADTNRMTVSYRESAVPFCYLLTPHKAVGFSADLTDAVVDDVRKKLKMPGLQI 74 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 Y+P+ + R L + D+ +T T R + + ++ G ++ K I Sbjct: 75 AYIPVTGQNRNPLLVNDTYDLEGGSTTNTAARGQDVSFSIS--LFYAGTRVLVKKASRIR 132 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + L+G ++ AG+T E + Y H++ + + + R D Sbjct: 133 GYADLAGKTVATAAGSTNENVIRKYAADHHLDIDVVPAKDYAAGPRMVESDRTAVLALDD 192 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 L+ ++ P + D + P + +GD Sbjct: 193 VLLFGMRANAADPELLEVAGDALQVEPRGCMVRKGDP 229 >gi|320008163|gb|ADW03013.1| extracellular solute-binding protein family 3 [Streptomyces flavogriseus ATCC 33331] Length = 280 Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 39/236 (16%), Positives = 74/236 (31%), Gaps = 12/236 (5%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 G + GI G +G + GFDVD ++ + D I+++ + +R A++ Sbjct: 38 GKITIGIKIDQPGLGLKTPDGKFAGFDVDIATYVAKELGYDAKNIEFVETKSADRETAIE 97 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQA 152 + ++ R + A Q ++ I S L+ ++C Sbjct: 98 RGDVKFIAATYSINDERLQKVDFA--GPYLLAHQDVLVRADDNSIKSPEDLNSKNLCSVT 155 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 G+T+ + D K + E DA T D S L + Sbjct: 156 GSTSAKNVKD---KLAPKAQLQNYGGYSECLTGLENKAVDALTTDDSILAGYAAQDAHKG 212 Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV------TAEELGITQKNIN 262 + + ++ + +GD + + MV A E N Sbjct: 213 KFKLAGFKMTNENYGIGLKKGDADLKKKIDAALTKMVSDGSWDKAVEANFGPANYK 268 >gi|260463006|ref|ZP_05811209.1| extracellular solute-binding protein family 3 [Mesorhizobium opportunistum WSM2075] gi|259031127|gb|EEW32400.1| extracellular solute-binding protein family 3 [Mesorhizobium opportunistum WSM2075] Length = 262 Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 61/263 (23%), Positives = 101/263 (38%), Gaps = 17/263 (6%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 F++ L L L + + +A L DI KRG L+ + T F+ V ANG+ G V+ Sbjct: 5 RLFIAGLALAGL---TTAASAGALDDITKRGELRVAVQTQGPPFSLVGANGERTGSSVEL 61 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 ++ + KI +L + AL S + D+L + TL R + +AF Sbjct: 62 AELMAKEMG---VKITFLDFDWDGLIPALLSGKADLLVADMTPTLAR--GMKVAFTTPYM 116 Query: 124 FDGQGFIMHKKKGISSVSQ--LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + G + G I V G T E F ++K + Sbjct: 117 YTGSTVFTKADSKFKTTEDCKAKGTKIAVLLGATGEKEAKAAFPDADIKSYKGGG---PL 173 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + A + D D+SA+ I+PD++SK PLA A + +++ Sbjct: 174 LLDAVNNGQADCGVNDVSAVKGQSTAYPA-GTFTIMPDLLSKEPLAFATRYDEP---DLL 229 Query: 242 SWTHYAMVTAEELGITQKNINQV 264 W + + G QKN++ Sbjct: 230 VWMNLFLNQVTIDGRLQKNLDYW 252 >gi|149203652|ref|ZP_01880621.1| putative ABC transporter periplasmic amino acid-binding protein [Roseovarius sp. TM1035] gi|149142769|gb|EDM30811.1| putative ABC transporter periplasmic amino acid-binding protein [Roseovarius sp. TM1035] Length = 268 Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 49/262 (18%), Positives = 97/262 (37%), Gaps = 9/262 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L+ + + + A L DI G L+C + AN GFD Sbjct: 1 MKKVTLFA--ALLGMTSIAGTAQADKLDDIISSGTLRCAVVLDFPPMGMRDANNVPIGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+C L++A+ + + + ER AL S ++D+ +T TL R ++G + Sbjct: 59 VDYCNDLAAALGVEA---EIVETPFPERIPALMSGRVDVGVASTSDTLERAKTVGFSI-- 113 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + + GI+S + G ++ AGT + L K ++ Sbjct: 114 PYFAFEMAVTANSGTGITSYEGMKGHTVGAVAGTYEAIALEAQVKEWGEG-EFRPYQTQA 172 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 ++ A + DA + A + + V+ +A + + + N Sbjct: 173 DVFLALSQGQLDATVSTSTVAQANVQSGNYKDITVVGFAPFDTDYVALFAKRDEYGFLNY 232 Query: 241 VS-WTHYAMVTAEELGITQKNI 261 + + + + T + +K + Sbjct: 233 LDLFVNQQVRTGRYDELYEKWV 254 >gi|302186282|ref|ZP_07262955.1| cystine transporter subunit [Pseudomonas syringae pv. syringae 642] Length = 265 Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 54/262 (20%), Positives = 95/262 (36%), Gaps = 12/262 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + F S + L++ + A L IK+ G L G+ F+ V +G GF+ Sbjct: 7 RRTFLFSAMGLMLSAGIAGQAMAGEQLQKIKESGTLNVGLEGTYPPFSFVDESGKLTGFE 66 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F AL+ + K + P AL SK++D++ + R+ + P Sbjct: 67 VEFSEALAKELG---VKAKIQPSKWDGILAALDSKRLDVVINQVTISDERKKKYDFSE-P 122 Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 T Q ++ K I + L+G + V GT ++ KA+ ++ Sbjct: 123 YTVSGIQALVLKKNEDAIKTAKDLTGKKVGVGLGT----NYEEWLKANVPGAIVKTYDDD 178 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 R DA D L AL++ ++ V D S+ A+ +G+ E Sbjct: 179 PSKIQDLSVGRIDAILVDR--LAALEMAAKTKNKLVPAGDAFSRQESGIALRKGEPELLA 236 Query: 240 IVSWTHYAMVTAEELGITQKNI 261 + M L + Sbjct: 237 AIDKAIDKMRADGTLKKLSEKY 258 >gi|229820930|ref|YP_002882456.1| extracellular solute-binding protein family 3 [Beutenbergia cavernae DSM 12333] gi|229566843|gb|ACQ80694.1| extracellular solute-binding protein family 3 [Beutenbergia cavernae DSM 12333] Length = 294 Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 51/245 (20%), Positives = 94/245 (38%), Gaps = 14/245 (5%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 G + GI G N ++ GFDVD ++ + +I+++ + +R LQ Sbjct: 52 GTINIGIKFDQPGLGFRDGN-EYTGFDVDVATYVACQLGYAEDQIEWVESPSAQRENMLQ 110 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQA 152 + Q+D++ T R+ + A + GQ ++ I+ L G ++C Sbjct: 111 TGQVDMIFATYSITDERKEVVAFA--GPYFVAGQDLLVRADETDIAGPEDLEGRNLCSVT 168 Query: 153 GTTTELTLAD-YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 G+T+ + D Y + N+ P + A + DA T D L L Sbjct: 169 GSTSAQRIKDEYAEGTNLVEQP----GYADCVTVLLAGQVDAVTTDDIILAGLAAQPANQ 224 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT--AEELGITQKNINQVSKDTT 269 + ++ S+ I Q D+E ++ M+T A E +T + + T Sbjct: 225 GQLTVVGAPFSEENYGVGIPQ-DSELCEDINAAIAQMITDGAWEEAVTANT--EGTGYTP 281 Query: 270 NPDVQ 274 N D+ Sbjct: 282 NADLN 286 >gi|312958493|ref|ZP_07773013.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas fluorescens WH6] gi|311287036|gb|EFQ65597.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas fluorescens WH6] Length = 266 Score = 150 bits (380), Expect = 3e-34, Method: Composition-based stats. Identities = 60/273 (21%), Positives = 107/273 (39%), Gaps = 17/273 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++ L + +A + D +RG L+ G V F G GF+ Sbjct: 1 MIKRYCLAALICVAALIQHNLAHAGAIDDAARRGVLRVGTTPTYVPFEMTDKQGRIVGFE 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D ++S A+ K++ + + E L +K+ D++ T R + L + Sbjct: 61 IDLLASMSQALG---VKLELVSVPYTELLPGLMAKKFDLIGSGMTVTQERNLKLNFSDSF 117 Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVF 176 I GQ ++H +SSV L A I V GTT E A + F Sbjct: 118 I--VVGQTVLLHPSLLGKVSSVEDLDDAGYRIAVTEGTTGEAVAQRLLGAA----RLLSF 171 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 EE + DA+ D + L+ SE + L + PLA + +GD Sbjct: 172 ATPEEGVRQVVRGQADAFIYDAP-YNLIALSRPENSELLALEQPFTFEPLAFGVKKGD-- 228 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 ++ ++W ++ + + G + ++ +DT Sbjct: 229 -FDSLNWINHFLSQIAQDGTYDRLHDKWFRDTA 260 >gi|307152145|ref|YP_003887529.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7822] gi|306982373|gb|ADN14254.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7822] Length = 261 Score = 150 bits (380), Expect = 3e-34, Method: Composition-based stats. Identities = 46/251 (18%), Positives = 89/251 (35%), Gaps = 12/251 (4%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 + ++I + + F ST A+ L +I RG L G+ G+ +GF++D Sbjct: 9 NLSLAIALMTLGLFPWASTRAASLEEIIHRGKLIVGVKDNTRPLGFKNEQGNLQGFEIDV 68 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 + L+ + + P+N ER + +DI T R + L+ Y Sbjct: 69 AQRLAQELLGSAEAVILRPVNNLERLQVVIDGTVDITIARVTDTSSRSRVVDLSI--YYY 126 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 DG G + K I + + + + + ++T + I + EE Sbjct: 127 LDGTGL-VTKNPLIRNRFDAASSRVALLNNSSTIAVIKSEMPNA----KLIGVDSYEEAL 181 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ--GDTEWYNIV 241 + + + D + GD S L ++ LP +S L + + +N V Sbjct: 182 SLLESGQADVFAGDNSILAGWVQEYP---QYRQLPVRLSGEALCVVMPKGLQYKSLHNRV 238 Query: 242 SWTHYAMVTAE 252 + + Sbjct: 239 NDAIARWQRSG 249 >gi|322376867|ref|ZP_08051360.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus sp. M334] gi|321282674|gb|EFX59681.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus sp. M334] Length = 279 Score = 150 bits (380), Expect = 3e-34, Method: Composition-based stats. Identities = 52/274 (18%), Positives = 100/274 (36%), Gaps = 18/274 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 K + ++ L+ LF T+ + A +++G + G + V + NG + Sbjct: 4 KKIALVLVSLLTLFLTACTQKASDPKQDNWDKYQEQGTITIGFDNTFVPMGFEEKNGQYT 63 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D +A+S + K+Q+ P++ + LQ+ ID + T R + + Sbjct: 64 GFDIDLAQAVSEKLGF---KVQFQPIDWDMKETELQNGTIDAIWNGYSATDERREKVAFS 120 Query: 118 FRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHP 173 I Y + Q ++ KK I SV + ++ QAG++ L D K Sbjct: 121 ---IPYMENQQVLVAKKSQQIRSVEDMKDKTLGAQAGSSGYLDFEAQPDLLKNRVKDQKA 177 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 ++ E + R DA D + +++ + A + Sbjct: 178 NQYQSFNEALIDLKNDRIDALLIDRVYANYYLQSEGILNDYNVFSAGFESESFAVGVRPA 237 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 D ++ A V + G QK + + Sbjct: 238 DKRLLQALN---QAFVELHQEGKFQKISQKWFGE 268 >gi|300853855|ref|YP_003778839.1| putative extracellular amino acid-binding protein [Clostridium ljungdahlii DSM 13528] gi|300433970|gb|ADK13737.1| predicted extracellular amino acid-binding protein [Clostridium ljungdahlii DSM 13528] Length = 274 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 54/283 (19%), Positives = 97/283 (34%), Gaps = 29/283 (10%) Query: 1 MYK-----DFFVSILCLIILFFTSFSTNASI---------LGDIKKRGFLKCGINTGLVG 46 M K ++I+ LF S+N++ L +KK G LK G+ Sbjct: 1 MKKLKKTIIVMLTIVFAAALFAGCGSSNSNSGDEQKGQNALERVKKAGVLKVGLEDSFPP 60 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 KGFD+D A+ + K Q++ LAL S + D++ Sbjct: 61 MEFRDNQNVLKGFDIDMANAIGKKLG---VKTQFVGTEFNGIILALNSGKFDVIISGLSI 117 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYF 164 R+ + + Y I+ K I + L+G + V GTT+E + Sbjct: 118 DEKRKKQIDFSQ---PYIQNAQIIVTKSGNEAIKTSKDLAGKKVGVGLGTTSEKVVQTL- 173 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 +++ E R DA D + D+ ++ +L + ++ Sbjct: 174 ---QGIKEVKKYDKTTEELQDLLIGRIDAVIVDEPVGKYYISSPDKKGKYTVLNEKLTNE 230 Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 P+ +GD E V A+ ++ G K + + Sbjct: 231 PMGVGFKKGDKELETAVQ---KALDELKKDGTMSKISTKWFGE 270 >gi|158424904|ref|YP_001526196.1| extracellular solute-binding protein [Azorhizobium caulinodans ORS 571] gi|158331793|dbj|BAF89278.1| extracellular solute-binding protein [Azorhizobium caulinodans ORS 571] Length = 267 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 35/248 (14%), Positives = 87/248 (35%), Gaps = 11/248 (4%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 + + A L +IKKRG + ++ G F AN G DV+ + +++ + Sbjct: 21 MGSFALPARADTLDEIKKRGKILIAVDLGSPPFGMNDANMQPTGSDVESAKLIAADLGFP 80 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 ++ + + + R L + + D++ + T R+ + K Sbjct: 81 ---LEIVQVTSPNRIPFLLTGKADLVMASFSVTDERKKVIDF--SDPYGVIQIVVAAPKS 135 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 + + L G + G++ + + M + ++ + A + + + Sbjct: 136 VAVKDLKDLVGKRLGTTRGSSNDKEATTQAQGAEM----VRYDDDATLITALVSGQVNIM 191 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 + A + RP++ + + ++ +P A + +GD V+ + +L Sbjct: 192 ASSPQVMAA--VNARRPNDPLEIKLVLKTNPYAAGLRKGDDALREAVNKVIATNLKNGKL 249 Query: 255 GITQKNIN 262 N Sbjct: 250 NEIYTRYN 257 >gi|302537325|ref|ZP_07289667.1| glutamate binding periplasmic protein [Streptomyces sp. C] gi|302446220|gb|EFL18036.1| glutamate binding periplasmic protein [Streptomyces sp. C] Length = 284 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 40/245 (16%), Positives = 80/245 (32%), Gaps = 8/245 (3%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 K + GI G +G ++GFDVD ++ + P +I++ + ER Sbjct: 41 KSDKIVIGIKFDQPGLGLKTPDGKFEGFDVDVATYVAKELGYQPDQIEWKQAVSAERENL 100 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICV 150 + + + ++ R+ + A + Q ++ I+ V L+ +C Sbjct: 101 ISNGDVKFIAATYSINDKRKAKVDFA--GPYFLAHQDLLVRADDSSITKVEDLNKKKLCS 158 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 G+T+ + F E DA T D S L Sbjct: 159 VTGSTSAQNIKKDLAK---DADLQEFPGYSECLTGLENKAVDALTTDNSILAGYAAQEKN 215 Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE-LGITQKNINQV-SKDT 268 + ++ +S + +GD + ++ MV +KN+ K+ Sbjct: 216 KGKFKLVGLSMSNENYGIGLKKGDKDLQTKINAALRKMVADGSWEAAVKKNLGPANYKNE 275 Query: 269 TNPDV 273 P + Sbjct: 276 PAPQI 280 >gi|119719815|ref|YP_920310.1| extracellular solute-binding protein [Thermofilum pendens Hrk 5] gi|119524935|gb|ABL78307.1| extracellular solute-binding protein, family 3 [Thermofilum pendens Hrk 5] Length = 279 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 59/277 (21%), Positives = 106/277 (38%), Gaps = 25/277 (9%) Query: 6 FVSILCLIILFFTSF----------STNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 F+++ + +L TS + S + IK RG L G + F V NG+ Sbjct: 14 FLAVFAVGLLLGTSLGYFLWHSASTTQTVSYVDKIKARGKLIVGTSADWPPFEYVDKNGN 73 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + G D++ + ++ + +++ + AL++ +DI+ + T RE + Sbjct: 74 YAGIDIEIAKRIAQELG---VQLEIKDMKFAALIEALKNGDVDIVIADMTPTAEREKVVD 130 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + P G I K I S L G I VQ GT E + K K Sbjct: 131 FSI-PYYTSKGYAVITTAKSDIKSEQDLYGKKIGVQLGTIQEDWANNNLKG---KAEIKS 186 Query: 176 FER-VEEIDAAYRAHRCDAYTGDISALYALKLTND--RPSEHVILPDIISKSPLAPAIIQ 232 ++R E+ A + DA AL + + +V +P I A A+ Q Sbjct: 187 YDRVYPEMVWALQRGDIDAMIVGDKIAEALITKEPSLKIATYVSIPTIGG----AVAVPQ 242 Query: 233 GDTEWYNIVSWTHYAMVTAEELG-ITQKNINQVSKDT 268 G + +V+ ++ + E+ I Q+ I + + Sbjct: 243 GAEDLKYVVNSVIEKLLESGEMNKIFQQEILKWLSSS 279 >gi|209526069|ref|ZP_03274601.1| extracellular solute-binding protein family 3 [Arthrospira maxima CS-328] gi|209493457|gb|EDZ93780.1| extracellular solute-binding protein family 3 [Arthrospira maxima CS-328] Length = 282 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 51/268 (19%), Positives = 102/268 (38%), Gaps = 25/268 (9%) Query: 1 MYKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M + + +L LI+ + FT ++ ++L I++ G L+ G+ T V F+ + NG+ +G+ Sbjct: 1 MNQKLAIPLLSLILSVGFTGYAAAETVLEQIERTGVLRAGVRTDAVPFSYLNDNGEIEGY 60 Query: 60 DVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 VD R + + + P +++ + ++RF +Q +D++ T T RE G+ Sbjct: 61 SVDLIRLIHGRLEEKLNQPIRLEMTTVTLQDRFEQVQKGNLDLVCEATSITAERE--NGV 118 Query: 117 AFRPITYFDGQGFIMHK------------KKGISSVSQLSGASICVQAGTTTELTLADYF 164 F + G ++ + IS+VS L +I TT + L + Sbjct: 119 DFSTPFFVTGIQMLVKTENRDRLDPTQLSETDISTVS-LERVTIGFLESTTADSELRPVY 177 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN-DRPSEHVILP-DIIS 222 + P E +A D L + ++P ++ Sbjct: 178 PEAQWEAVP----SRAEGIRRLQAGELQGIVSDGILLLGQLWKDGSDRQNFQLVPSQPLT 233 Query: 223 KSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 + EW +V+ T + Sbjct: 234 FENYGCILPMNSREWSRVVNSTIASPEN 261 >gi|16330909|ref|NP_441637.1| glutamine-binding protein [Synechocystis sp. PCC 6803] gi|1653403|dbj|BAA18317.1| glutamine-binding protein [Synechocystis sp. PCC 6803] Length = 296 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 47/269 (17%), Positives = 98/269 (36%), Gaps = 28/269 (10%) Query: 2 YKDFFVSILCLIILFFTSFSTNASI----------------LGDIKKRGFLKCGINTGLV 45 + V+ L ++ + S A L I++RG L+ G+ L Sbjct: 25 MRSLIVASCLLFLIPGLTVSATAQTMVLETNGIAMTSREVSLEAIRQRGKLRVGVKDNLR 84 Query: 46 GFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105 G+ G ++ R L+ A+ D + ++ +P+ ++R L + +D++ Sbjct: 85 PLGFRDGQGELTGLEIALARRLALALLGDETAVELVPVQNQDRLPLLLNGDVDLIIAQMG 144 Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165 R+ + P Y DG G I K + ++ + +I V + T + F Sbjct: 145 QNPARDRLVDF--SPPYYMDGVGLIS-KNSSLKNIDRNQAHTIAVLNNSGTIPVIKQAFP 201 Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225 + + ++ + A+ GD S L + S++ LP ++ +P Sbjct: 202 QA----TLVGVDSYDQAYQILEQGQAMAFAGDNSVLSGWAQSQ---SDYYHLPLQLTVNP 254 Query: 226 LAPAIIQ--GDTEWYNIVSWTHYAMVTAE 252 LA A+ + V+ T + + Sbjct: 255 LAIAMAKGLQHQALQREVNQTLLQLRASG 283 >gi|315926090|ref|ZP_07922290.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Pseudoramibacter alactolyticus ATCC 23263] gi|315620534|gb|EFV00515.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Pseudoramibacter alactolyticus ATCC 23263] Length = 273 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 62/275 (22%), Positives = 95/275 (34%), Gaps = 20/275 (7%) Query: 1 MYKDFFVSILCLIILFFTSFST-----NASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K V L ++ F+T S L D G L+ G N F N Sbjct: 1 MKKKLTVIALAACLVAVIGFATGCGSKQKSALDD----GVLQIGTNAEYTPFEYKDKNNK 56 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFDVD RAL+ + K ++ + F L S Q + + T R+ S Sbjct: 57 LVGFDVDLGRALAKKMG---VKAKWTNTSFDGIFNGLNSGQYECIIAGVSNTDKRQKS-- 111 Query: 116 LAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 A +G + + + QL G + VQ TT + A FK K Sbjct: 112 FAMSDSYLGNGVVIVSPAGGAQATDIKQLDGKKVGVQLETTAD-YAAKAFKKDGNKMTLK 170 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 F+ + + A R + D D A +P+ + + +S P+A + D Sbjct: 171 EFDSMIDAFTALRGGQIDYIMTDEPV--ANFYVAQQPNTYKVSSSTLSNEPVAVVCRKQD 228 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 T + ++ A+ G K KD T Sbjct: 229 TALRDKINDALKALKKDGTYGKLTK--KWFGKDLT 261 >gi|91789327|ref|YP_550279.1| extracellular solute-binding protein [Polaromonas sp. JS666] gi|91698552|gb|ABE45381.1| amino acid ABC transporter substrate-binding protein, PAAT family [Polaromonas sp. JS666] Length = 266 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 46/255 (18%), Positives = 91/255 (35%), Gaps = 12/255 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + K F + L + + L D+ K + I T + V + +G D Sbjct: 6 LSKRLFSLSMMSAALLVAAGVQAQTALDDVMKAKKITIAIPTDFPPYGFVGPDLKPQGLD 65 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +++ + + I+ P+++ R LQ+++ D++ RE + Sbjct: 66 IDMANYIAAKLGVE---IELTPVSSANRVPYLQTRKADLVISTLGKNAEREKVIDFTAAY 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +F Q K I S + LSG SI V G + L A FE Sbjct: 123 SPFF--QAVFAPKSMSIKSFADLSGKSIGVTRGAIEDQELTKLAPA---GADIKRFEDNN 177 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +++ A + S + N + +E+ +L + SP + +G+ + Sbjct: 178 ATVSSFVAGQVQLIATGASVAGNMMAKNPKLAAEYKLL---LKDSPNFIGVGKGEDKLRL 234 Query: 240 IVSWTHYAMVTAEEL 254 V+ A ++ Sbjct: 235 KVNEIIATGKKAGDI 249 >gi|188534746|ref|YP_001908543.1| Putative amino acid ABC transporter, substrate binding protein [Erwinia tasmaniensis Et1/99] gi|188029788|emb|CAO97667.1| Putative amino acid ABC transporter, substrate binding protein [Erwinia tasmaniensis Et1/99] Length = 261 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 41/228 (17%), Positives = 86/228 (37%), Gaps = 10/228 (4%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 +A L DI+KRG L+ + F V + +G+D+D L+ + K+Q +P Sbjct: 22 HADQLQDIEKRGVLRVAVPQDFPPFGSVGTDLQPQGYDIDMANYLARQM---KLKLQLVP 78 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + + R LQ+ ++D++ + RE + + +F G ++ + + ++ Sbjct: 79 VTSANRVPYLQTDKVDLVISSLGKNPEREKVIDFSRAYAPFF--LGVFGPQQGTLKNAAE 136 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 LSG S+ V G ++ L +E +AY + + + Sbjct: 137 LSGKSVGVTRGAVEDMVLTSVAPK---DAQVKRYEDNNTTLSAYLSGQVQYIATGNLVVA 193 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 A+ N + + + SP + +G+ V + Sbjct: 194 AMARQNAAKA--PLSQFTLKDSPCFIGLKKGEPALKAKVDALIDRAIK 239 >gi|167724971|ref|ZP_02408207.1| glutamate/aspartate periplasmic binding protein precursor [Burkholderia pseudomallei DM98] gi|167907857|ref|ZP_02495062.1| glutamate/aspartate periplasmic binding protein precursor [Burkholderia pseudomallei NCTC 13177] Length = 240 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 37/217 (17%), Positives = 73/217 (33%), Gaps = 6/217 (2%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKI 78 +A L I + V F + GF D A+ + +I Sbjct: 15 HARTLKKIADTNRMTVSYRESAVPFCYLLTPHKAVGFSADLTDAVVDDVRKKLKMPGLQI 74 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 Y+P+ + R L + D+ +T T R + + ++ G ++ K I Sbjct: 75 AYIPVTGQNRNPLLVNDTYDLEGGSTTNTAARGQDVSFSMN--LFYAGTRVLVKKASRIR 132 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + L+G ++ AG+T E + Y H++ + + + R D Sbjct: 133 GYADLAGKTVATAAGSTNENVIRKYAADHHLDIDVVPAKDYAAGPRMVESDRTAVLALDD 192 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 L+ ++ P + D + P + +GD Sbjct: 193 VLLFGMRANAADPELLEVAGDALQVEPRGCMVRKGDP 229 >gi|310827295|ref|YP_003959652.1| hypothetical protein ELI_1703 [Eubacterium limosum KIST612] gi|308739029|gb|ADO36689.1| hypothetical protein ELI_1703 [Eubacterium limosum KIST612] Length = 279 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 47/278 (16%), Positives = 105/278 (37%), Gaps = 17/278 (6%) Query: 1 MYKDFFVSILCLIILFFTSFST-------NASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M K F V L +++F + + +++ D G L ++ + Sbjct: 1 MKKKFLVLSLAFMLVFSVTLAGCSGNGKGDSASNDDPIADGTLSVAVDDTYLPMEFRDDQ 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 + GFDVD +A+ + K+ + + F L +KQ D + +T T R Sbjct: 61 NNLVGFDVDLAKAIGEDLG---VKVDFTTVAWDGIFNGLNAKQYDAIISSTSITPER--Q 115 Query: 114 LGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 G +G + K + + +L+G ++ VQ TT + + Sbjct: 116 EGFNQTNPYVSNGIVIVSRKDATPVKTFEELAGKTVGVQLDTTADNGAQKLKEQTGTNVE 175 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 ++ + + AA + + D+ A+ +P + ++++ P+A + + Sbjct: 176 IKQYDGMLDAFAALEGKQINNVMTDVGV--AMYYVAQKPELFEVTSEVLTNEPIAVTVRK 233 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 G+ + ++ T + E +T+ ++ +D TN Sbjct: 234 GEDAFTEKLNETLKKLQ--ENGTMTEISMKWFGEDMTN 269 >gi|289168136|ref|YP_003446405.1| ABC transporter substrate binding lipoprotein-amino acid transport [Streptococcus mitis B6] gi|288907703|emb|CBJ22540.1| ABC transporter substrate binding lipoprotein-amino acid transport [Streptococcus mitis B6] Length = 279 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 51/281 (18%), Positives = 102/281 (36%), Gaps = 17/281 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 K + ++ L+ LF T+ + A +++G + G + V + NG + Sbjct: 4 KKIALVLVSLLTLFLTACTQKASDPKQDNWDKYQEQGTITIGFDNTFVPMGFEEKNGQYT 63 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D +A+S + K+Q+ P++ + LQ+ ID + T R + + Sbjct: 64 GFDIDLAQAVSEKLGF---KVQFQPIDWDMKETELQNGTIDAIWNGYSATDERREKVAFS 120 Query: 118 FRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHP 173 I Y + Q ++ KK I SV + ++ QAG++ L D K H Sbjct: 121 ---IPYMENQQVLVTKKSQWIHSVEDMKDKTLGAQAGSSGYLDFEAQPDLLKNHVKDQKA 177 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 ++ E + R DA D + +++ + A + Sbjct: 178 NQYQSFNEALIDLKNDRIDALLIDRVYANYYLQSEGILNDYNVFSAGFESESFAVGVRPA 237 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 D ++ A+ + + +D +V+ Sbjct: 238 DKRLLQALNQAFIALHQEGKFQEISQ--KWFGEDVATKEVK 276 >gi|50086540|ref|YP_048050.1| amino acid ABC transporter periplasmic substrate-binding protein [Acinetobacter sp. ADP1] gi|49532514|emb|CAG70228.1| putative amino acid-binding protein (ABC superfamily, peri_bind) [Acinetobacter sp. ADP1] Length = 305 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 48/245 (19%), Positives = 93/245 (37%), Gaps = 12/245 (4%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 NA L DIKK G +K I F V + +G+D+D + ++ + Sbjct: 60 ALMLPTFANADALADIKKAGVIKIAIPQDFPPFGTVGTDLKAQGYDIDVAKLIAQDLG-- 117 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 K+Q +P+ + R L +K++D++ + RE + +++G K Sbjct: 118 -VKLQLVPVTSANRIPYLTTKKVDLVISSLGKNPEREKVIDFVGPYAPFYNG--VFGQKN 174 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 + S + L+G +I V G+ +L L+ + FE +A+ + + + Sbjct: 175 VSVKSAADLAGKTIAVTRGSIEDLELSKVAPSST---TIKRFEDNNSTVSAFYSGQVNLI 231 Query: 195 TGDISALYAL-KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 L K + +P E + I SP + +G+T N ++ + Sbjct: 232 ATGNVVAGTLSKHFSKKPLETKFI---IKNSPCYIGLNKGETALQNKLTAIIKTAKGNGQ 288 Query: 254 LGITQ 258 L Sbjct: 289 LNRIS 293 >gi|222082602|ref|YP_002541967.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221727281|gb|ACM30370.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 280 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 57/260 (21%), Positives = 99/260 (38%), Gaps = 15/260 (5%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK-GFDVD 62 F + L + LF T +A L IK RG L G+ F + G + G+++D Sbjct: 10 TLFAAALSIGALFSTIAHADA-TLDRIKGRGSLTVGVILSGAPFGYIDPAGQEQKGYNID 68 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 +AL+ + K++ + + R LQ ++DIL N +T R + L + P Sbjct: 69 IAKALADKLG---VKLETVTVTPPNRVQFLQQGKVDILIANMQYTEER--AKILDYVPTA 123 Query: 123 YFDGQGFIM-HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y G + K G+ S L G ++CV G+ L + + A E Sbjct: 124 YDRSGGAAVGRKDSGLKDWSDLKGKAVCVSQGSNYTQPLIEQYGA-----EVKALPSQPE 178 Query: 182 IDAAYRAHRCDAYTG-DISALYALKLTNDRPSEHVIL-PDIISKSPLAPAIIQGDTEWYN 239 A + C A + L+ + ++ IL P + S + +G+T+ N Sbjct: 179 SLLALQGGNCVAAVHVGATVGLLLQDRPEEWKDYTILFPTELIPSDSVIWLRKGETDTSN 238 Query: 240 IVSWTHYAMVTAEELGITQK 259 + + +L K Sbjct: 239 ALDKIIRELHANGKLLEYAK 258 >gi|86741500|ref|YP_481900.1| extracellular solute-binding protein [Frankia sp. CcI3] gi|86568362|gb|ABD12171.1| amino acid ABC transporter substrate-binding protein, PAAT family [Frankia sp. CcI3] Length = 319 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 55/262 (20%), Positives = 95/262 (36%), Gaps = 29/262 (11%) Query: 24 ASILGDI-KKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDP---SKI 78 S + I + RG+L+ GI T + +GFDV RA+++AIF + Sbjct: 51 GSRMRAIARDRGYLRVGIATDAPPAGLMNWRTLRLEGFDVGIARAVAAAIFGAERVDDHV 110 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 Q+ + ER L+S +D+L T R+ + + Y ++ + G Sbjct: 111 QFRAVTTSEREDLLRSGMVDMLVATMTITCERKRQVRF--SDVYYESTLRLLVRENAGFR 168 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 ++ L G +C AG+T+ LA P+ R+ + A + DA GD Sbjct: 169 GIADLVGRPVCSSAGSTSSEKLARLPA---PGPRPVTRARLADCLVALQHGDVDAIAGDD 225 Query: 199 SALYALKLTNDRPSEHVILPDIIS---------KSPLAPAII-----QGDTEWYNIVSWT 244 L L P V+ P P A+ GD E+ V+ Sbjct: 226 VLLAGLAAQ--DPYTTVLGPSAFGADFEAGGRLDEPYGIAMPITGDTAGDDEFVAFVNGV 283 Query: 245 HYAMVTAEELGITQKNINQVSK 266 ++ G + ++ + Sbjct: 284 LREIML---DGTWSRLYDEWLR 302 >gi|29831920|ref|NP_826554.1| amino acid ABC transporter solute-binding protein [Streptomyces avermitilis MA-4680] gi|29609037|dbj|BAC73089.1| putative polar amino acid ABC transporter substrate-binding protein [Streptomyces avermitilis MA-4680] Length = 335 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 47/265 (17%), Positives = 92/265 (34%), Gaps = 15/265 (5%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-----DWKGFDVDFCRALSSAIF 72 S + + + IKKRG+L G++ + N D +GFD+D ++ I Sbjct: 71 ASNDESGAAIKAIKKRGYLSVGVDQNSYRWGYRDPNSTKKGSDLEGFDIDLAHRIADEIL 130 Query: 73 DDPSK-IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131 P+ +++ + +R A++S Q+D++ R T R + + GQ + Sbjct: 131 GKPNADVRFHAIPTNQRIEAIRSGQVDMVVRTMTITCKRLADVAF--SDPYFRTGQQVLA 188 Query: 132 HKKKGISSVS-QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE---EIDAAYR 187 KK GI+ L+ IC A +T TL KA + + E V + + Sbjct: 189 PKKSGITGYDKSLAHKRICTAASSTAFDTLTADRKAGRLVVSARMSEPVPNQLDCLVRLQ 248 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 + DA D + + + + + A+ + V+ Sbjct: 249 LGQVDAVVTDGALAASQAAQDPT---VELKGAAFTDEYYGVAMKLDAKDLVRRVNQVLVD 305 Query: 248 MVTAEELGITQKNINQVSKDTTNPD 272 + ++ + P Sbjct: 306 YRRSGWQASYDTWLSPTLGKNSGPS 330 >gi|217422247|ref|ZP_03453750.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 576] gi|217394478|gb|EEC34497.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 576] Length = 240 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 37/217 (17%), Positives = 73/217 (33%), Gaps = 6/217 (2%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKI 78 +A L I + V F + GF D A+ + +I Sbjct: 15 HARTLKKIADTNRMTVSYRESAVPFCYLLTPHKAVGFSADLTDAVVDDVRKKLKMPGLQI 74 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 Y+P+ + R L + D+ +T T R + + ++ G ++ K I Sbjct: 75 AYIPVTGQNRNPLLVNDTYDLEGGSTTNTAARGQDVSFSIS--LFYAGTRVLVKKASRIR 132 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + L+G ++ AG+T E + Y H++ + + + R D Sbjct: 133 GYADLAGKTVATAAGSTNENVIRKYAADHHLDIDVVPAKNYAAGPRMVESDRTAVLALDD 192 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 L+ ++ P + D + P + +GD Sbjct: 193 VLLFGMRANAADPELLEVAGDALQVEPRGCMVRKGDP 229 >gi|209516321|ref|ZP_03265178.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] gi|209503257|gb|EEA03256.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] Length = 269 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 45/258 (17%), Positives = 93/258 (36%), Gaps = 16/258 (6%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 +++ L L + +A L DI K G ++ G+ F + + G+D+D Sbjct: 17 LAMTALSALCALPSAAHADALDDIAKSGTVRIGVFEDYPPFGSIGPDMKPVGYDIDVANL 76 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 + A+ +K++ +P+ R L + D+L + T R + + Y+ Sbjct: 77 IGKAL---NAKVELVPVTGDNRMAFLADHKADLLL-SVGQTPERAKVIDFSQPYAPYY-- 130 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 K + S + L+G SI V GT +L++ + F+ +A+ Sbjct: 131 LAVFGPKSLPVKSAADLAGKSISVARGTLEDLSVTKIAP---PSANIKRFDDPNGAISAF 187 Query: 187 RAHRCDAYT--GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + + D+ A + + P + + SP + + + V T Sbjct: 188 ISGQVQLMVVGNDVGATILARHPANDPEQ----KFALFSSPDHVGLNKNEPRLKAKVDET 243 Query: 245 HYAMVTAEELG-ITQKNI 261 + I+QK + Sbjct: 244 IAKARKDGTMNAISQKWL 261 >gi|294631810|ref|ZP_06710370.1| glutamate binding protein [Streptomyces sp. e14] gi|292835143|gb|EFF93492.1| glutamate binding protein [Streptomyces sp. e14] Length = 278 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 44/269 (16%), Positives = 94/269 (34%), Gaps = 19/269 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG------FLKCGINTGLVGFAEVKANG 54 M ++ +++ S + S D K G + GI G + G Sbjct: 1 MKLRKVTAVSAVVLALAVSATACGS--DDKKDEGSSGGGKKIAIGIKYDQPGLGQKTPQG 58 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + GFDVD + ++ + + +I++ + +R LQ ++ ++ T RE + Sbjct: 59 -YSGFDVDVAKYVAKKLGYNEDQIEWKESKSADRETMLQRGDVEFIAATYSITPEREKKV 117 Query: 115 GLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 A Q ++ I S + L+ +C G+T+ + D K + Sbjct: 118 DFA--GPYLLAHQDVLVRADDTSIKSPADLNSKKLCSVTGSTSAQNIKDTLA---PKANL 172 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + + + DA T D S L + + + ++ + +G Sbjct: 173 LKYPTYSACLTGLQNKAIDALTTDDSILAGYAAQDQFKGKFKLGGLKMTNENYGIGVKKG 232 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNIN 262 ++ ++ MV+ G QK ++ Sbjct: 233 -SDLKAKINKALEEMVS---DGSWQKAVD 257 >gi|330962036|gb|EGH62296.1| cystine transporter subunit [Pseudomonas syringae pv. maculicola str. ES4326] Length = 265 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 54/262 (20%), Positives = 91/262 (34%), Gaps = 12/262 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + F S L L++ + A L IK+ G L G+ F+ V G GF+ Sbjct: 7 RRTFLFSALSLMLGSGIAGQAMAGEQLQKIKESGTLNVGLEGTYPPFSFVDEKGKLTGFE 66 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ AL+ + K + P AL SK++D++ + R+ + P Sbjct: 67 VELSEALAKELG---VKAKVQPSKWDGILAALDSKRLDVVINQVTISDERKKKYDFSQ-P 122 Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 T Q ++ K I S L+G + V GT E L + +K +E Sbjct: 123 YTVSGIQALVLKKNADAIKSAQDLTGKKVGVGLGTNYEQWLKENVPGAVVK----TYEDD 178 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 R DA D L AL++ + S+ A+ +G+ E Sbjct: 179 PTKIQDLSVGRIDAILVDR--LAALEIAAKTKGKLAPAGAAFSRQASGIALRKGEPELQA 236 Query: 240 IVSWTHYAMVTAEELGITQKNI 261 ++ + L + Sbjct: 237 AINQALDKLRADGTLKKLSEKY 258 >gi|330873992|gb|EGH08141.1| cystine transporter subunit [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 268 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 60/263 (22%), Positives = 92/263 (34%), Gaps = 11/263 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + F S + L++ + A L IK G L G+ F+ V NG GF+ Sbjct: 7 RRTFLFSAMGLMLSAGIAGQAMAGEQLQKIKDSGTLNVGLEGTYPPFSFVDKNGKLTGFE 66 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F AL+ + K + P AL SK++D++ + R+ + P Sbjct: 67 VEFSEALAKELG---VKAKIQPSKWDGILAALDSKRLDVVINQVTISDERKKKYDFSE-P 122 Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 T Q ++ K I S LSG + V GT E L KA+ +E Sbjct: 123 YTISGIQALVLKKNADAIKSAKDLSGKKVGVGLGTNYEQWL----KANVPGAEIKTYEDD 178 Query: 180 EEIDAAYRAHRCDAYTGDI-SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R DA D +AL T D E + S+ A+ +G+ E Sbjct: 179 PTKIQDLSVGRIDAILVDRLAALEIAAKTKDTKRELAPAGEAFSRQESGIALRKGEPELL 238 Query: 239 NIVSWTHYAMVTAEELGITQKNI 261 + + L K Sbjct: 239 AAIDKAIDKLRADGTLEKLSKKY 261 >gi|268610257|ref|ZP_06143984.1| extracellular solute-binding protein family 3 [Ruminococcus flavefaciens FD-1] Length = 292 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 41/239 (17%), Positives = 80/239 (33%), Gaps = 10/239 (4%) Query: 21 STNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 + L +I +G L G++ N + GFD+D + + + + + K Sbjct: 51 AAEGDQSLQNILDKGELVLGLDASFPPMGFTDENNEIIGFDIDVAQEVCNRMGVELVK-- 108 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 P+N + L+ +ID + R + + + F++ + S Sbjct: 109 -QPINWDTKEEDLKVGKIDCIWNGMSINPAR--AEAMNLSDPYMKNEMIFVVPADSEVKS 165 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L G ++ VQ G+T + L + K E + DA D Sbjct: 166 MDDLEGKTVGVQTGSTAQEILEAWDK--FDTITESPLEENVTALSQMELGFSDAVFLDSV 223 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 +N++ ++V+L + A + D + V T M LG Sbjct: 224 VANYFITSNNK--DYVVLDGNLEAEEYAIGFRKEDQALRDEVQKTLSEMKADGALGEIS 280 >gi|239931234|ref|ZP_04688187.1| sugar-binding protein [Streptomyces ghanaensis ATCC 14672] gi|291439606|ref|ZP_06578996.1| sugar-binding protein [Streptomyces ghanaensis ATCC 14672] gi|291342501|gb|EFE69457.1| sugar-binding protein [Streptomyces ghanaensis ATCC 14672] Length = 332 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 45/264 (17%), Positives = 88/264 (33%), Gaps = 18/264 (6%) Query: 17 FTSFSTNASILGDIK-KRG---FLKCGINTGLVGFAEVKAN----GDWKGFDVDFCRALS 68 + + + IK +RG L G++ + N G +GFD+D ++ Sbjct: 56 LSPSRADGETIEAIKNRRGEKRKLIVGVDQNSYRWGYRNPNSGESGRLEGFDIDLVHRIA 115 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 I D +Q+ + +R A+Q ++D++ R R +AF + GQ Sbjct: 116 EDILGDADAVQFKAIPTDQRIPAIQDGRVDMVVRTMTINCARM--EEVAFSAPYFRTGQQ 173 Query: 129 FIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE---EIDA 184 + K + L+ IC AG+T L + KA + + V + Sbjct: 174 VLAPKSSPVEGYDGTLANRRICTAAGSTAYAKLEEDKKAGALPESTDIRTTVPNQLDCLV 233 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + DA D + + + + + + A+ + + V+ Sbjct: 234 RLQLGEVDAVVTDAALAASQAAQDPT---VRLKGEAFTTEYYGVAMKKDADDLVRRVNQI 290 Query: 245 HYAMVTAEELGITQKNINQVSKDT 268 E G Q + + T Sbjct: 291 LVDFREDTEDG-WQSSYDTWLSAT 313 >gi|322516689|ref|ZP_08069599.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus vestibularis ATCC 49124] gi|322124783|gb|EFX96218.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus vestibularis ATCC 49124] Length = 224 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 49/215 (22%), Positives = 93/215 (43%), Gaps = 16/215 (7%) Query: 1 MYKDFFVSILC-LIILFFTSFSTNAS---------ILGDIKKRGFLKCGINTGLVGFAEV 50 + + F +S L + +L + + S+ A + I K+G L G+ + F Sbjct: 6 LSRIFAISALAFVAVLLWNTKSSQADERSKLLNSAAIQKIVKKGTLNVGVKQDVPNFGYY 65 Query: 51 KANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 A + ++G ++D K+ + + + R + + ID+L T Sbjct: 66 SAKTNTYQGMEID---LAKKIAKKLKVKVNFTAVTPQTREALMDNGTIDMLIATYTITDE 122 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 R+ S A Y+D GF++ K G +S L+G +I V G++ + + +Y A+N+ Sbjct: 123 RKAS--YAMSNPYYYDQIGFLVQTKSGYKKLSDLNGKTIGVSQGSSAKTAVEEYASANNL 180 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 K+ + E+ + A+R DA+ GD S L Sbjct: 181 KFDYVQLGSYPELAVSLYAYRIDAFAGDKSILSGY 215 >gi|282866759|ref|ZP_06275798.1| extracellular solute-binding protein family 3 [Streptomyces sp. ACTE] gi|282558387|gb|EFB63950.1| extracellular solute-binding protein family 3 [Streptomyces sp. ACTE] Length = 344 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 41/242 (16%), Positives = 81/242 (33%), Gaps = 15/242 (6%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFD 73 + S + + I++RG L G++ + +GFD+D RAL+ I Sbjct: 69 ASLPASSADGPTIQKIRERGKLIAGVDQNSFRWGYRDPETRTLEGFDIDLVRALAKDILG 128 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 D + + + +R AL+ ++D++ R R + + + GQ + K Sbjct: 129 DADAVIFRAIPTNQRIAALEHDRVDVVVRTMTINCGRLEQVSFSTA--YFQAGQQVLAAK 186 Query: 134 KKGISSVS-QLSGASICVQAGTTTELTL-ADYFKAHNMKYHPIVFERVE--------EID 183 + I+ L+G +C G+T L + F A H + + + Sbjct: 187 ESDITGYDRSLAGKRVCSAEGSTAYEALKKESFGAVFEDEHEDTDQDPDLLTVPNQLDCL 246 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 + DA D + P+ + + A G + V+ Sbjct: 247 VRLQLGEVDAVVTDNALAAGQAAQ--DPAVELKGDKPFTTEYYGVAAKLGADDLVARVNH 304 Query: 244 TH 245 Sbjct: 305 VL 306 >gi|90413901|ref|ZP_01221887.1| hypothetical binding protein component of ABC transporter [Photobacterium profundum 3TCK] gi|90325085|gb|EAS41595.1| hypothetical binding protein component of ABC transporter [Photobacterium profundum 3TCK] Length = 265 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 53/273 (19%), Positives = 106/273 (38%), Gaps = 22/273 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + ++ ++ T IL DI K G L+ + G + F NG + GFD Sbjct: 1 MRKLLSGIVAAVALMSTSAAVTAGPILDDIAKSGELRVCFDAGYMPFEMKSKNGSFIGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLN--AKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 +D + ++ + ++Y+P+N L + + +++ R + + A Sbjct: 61 IDIGKQMARQMG-----VKYVPINTAWDGIIPTLLTGKCHMINAGMTINAQRNMRVNFAD 115 Query: 119 RPITYFDGQGFIMHK--KKGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPI 174 GQ +++ + I+S L+ + +I + GTT E + Sbjct: 116 --PYIVIGQSILINPELEGEITSYKDLNDSKYTIATKLGTTGEQAIKRMISKA----KLN 169 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 VFE + + DA+ D+ ND + + L + PL AI QGD Sbjct: 170 VFETQSDAVLEVANGKADAFIYDMPFNAIYASQND--GKVIHLEQPFTYEPLGWAIAQGD 227 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 ++ N ++ + + G + ++ K+ Sbjct: 228 SDMLNFLN---NFLRQIKGDGTYDRVYDKWFKN 257 >gi|325496960|gb|EGC94819.1| cystine transporter subunit [Escherichia fergusonii ECD227] Length = 288 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 48/266 (18%), Positives = 88/266 (33%), Gaps = 15/266 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V L L+ + +L +K+RG L G+ F+ +G GF+V+F + Sbjct: 36 VMALALVAGMSAKTFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 95 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + + + P +L SK+ID++ + R+ G Sbjct: 96 LAKHLGVEAT---LKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDF--STPYTVSG 150 Query: 127 QGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K I + + L G + V GT ++ + + ++ Sbjct: 151 IQALVKKGNEGTIKTANDLKGKKVGVGLGT----NYEEWLRQNVQGVDIRTYDDDPTKYQ 206 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 R R DA D L AL L + D S+ A+ + + + V+ Sbjct: 207 DLRVGRIDAILVDR--LAALDLVKKTKDTLAVTGDAFSRQESGVAVRKNNEDLLKAVNEA 264 Query: 245 HYAMVTAEELGITQKNINQVSKDTTN 270 M L + D T Sbjct: 265 IAEMQKDGTLQALSQ--KWFGADVTK 288 >gi|83950196|ref|ZP_00958929.1| polar amino acid uptake family ABC transporter, periplasmic substrate-binding protein [Roseovarius nubinhibens ISM] gi|83838095|gb|EAP77391.1| polar amino acid uptake family ABC transporter, periplasmic substrate-binding protein [Roseovarius nubinhibens ISM] Length = 269 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 35/230 (15%), Positives = 88/230 (38%), Gaps = 9/230 (3%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K + +++ + + A L +IK G + G+ + + ++G+ G ++ Sbjct: 1 MKHAWKTVIASAAIVAFGTTAQADQLQEIKDEGKIVVGVKQDYKPWGYLTSDGELAGLEI 60 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D R ++ + + ++ +P+ A R L +ID++ R +G+ P Sbjct: 61 DLARDVAERLGVE---VELVPVVASNRMEFLSQGRIDLIIATMGDNPKRREVVGM-IEPN 116 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y G + K G+ L G +C G+ + + + + F + E Sbjct: 117 YYAGGTNVLAPKAVGLKEWEDLRGKDVCALQGSYYNKRVTQLY-----GPNLVAFAGIPE 171 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + +A + C + D + + + ++++ +E + + A+ Sbjct: 172 VTSALKNGSCIGFLYDNTWIESQLASDEQWAEFEMPFPTEDPQAWSIAVP 221 >gi|295699405|ref|YP_003607298.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] gi|295438618|gb|ADG17787.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] Length = 271 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 45/259 (17%), Positives = 92/259 (35%), Gaps = 16/259 (6%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 + L + L + +A L DI K G ++ G+ F + + G+D+D Sbjct: 18 LAATLAITALGALPSAAHADALDDIAKSGTVRIGVFEDYPPFGSIGPDMKPVGYDIDVAN 77 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 + A+ +K++ +P+ R L + D+L + T RE + + Y+ Sbjct: 78 LIGKAL---NAKVELVPVTGDNRMAFLADHKTDMLL-SVGQTPEREKVIDFSQPYAPYY- 132 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 K + + + L G SI V GT +L++ + F+ +A Sbjct: 133 -LAVFGPKSLPVKNAADLGGKSISVARGTLEDLSVTKIAP---PSANIKRFDDPNGAISA 188 Query: 186 YRAHRCDAYT--GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 + + + D+ A + + P + + SP + + + V Sbjct: 189 FLSGQVQLMVVGNDVGATILARHPANDPEQ----KFALFSSPDHVGLNKNEPRLKAKVDE 244 Query: 244 THYAMVTAEELG-ITQKNI 261 T + I+QK + Sbjct: 245 TIAKARKDGTMNAISQKWL 263 >gi|241764991|ref|ZP_04762988.1| extracellular solute-binding protein family 3 [Acidovorax delafieldii 2AN] gi|241365425|gb|EER60212.1| extracellular solute-binding protein family 3 [Acidovorax delafieldii 2AN] Length = 300 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 55/261 (21%), Positives = 95/261 (36%), Gaps = 19/261 (7%) Query: 7 VSILCLIILFFTSFSTNASILG------DIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59 ++ L +A+ + IK+ G L+ G F+ + +G +GF Sbjct: 29 INTAAFDALIAQGPVADAATIASSTWASKIKQAGTLRLGGTQTSNLFSLLNEKDGKIRGF 88 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D + L+ I D K Q+ + + R L + Q+D++ T R + A Sbjct: 89 DAGLAQLLTRYILGDGGKYQFTQVTSSTREQVLINDQVDMVFATYSITPARAEKISFA-- 146 Query: 120 PITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y G ++ K I S + L+G + QAG+T LA Y F+ Sbjct: 147 GPYYTSQAGVLVKANNKTIQSYNDLAGKKVATQAGSTGPAILAQYAPKA----VVQEFQT 202 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +E A R R DAY D + L ++ P + + P + +G Sbjct: 203 HQEALDALRQGRVDAYITDHTLLLNALSLGTGDAKLAGAPFGL-QDPYGVGLPKGSDG-- 259 Query: 239 NIVSWTHYAMVTAEELGITQK 259 V++ + + E G K Sbjct: 260 --VAFINTFLKKVEADGTWAK 278 >gi|328947349|ref|YP_004364686.1| ABC transporter periplasmic protein family 3 [Treponema succinifaciens DSM 2489] gi|328447673|gb|AEB13389.1| ABC-type transporter, periplasmic subunit family 3 [Treponema succinifaciens DSM 2489] Length = 256 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 43/252 (17%), Positives = 87/252 (34%), Gaps = 15/252 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V+++C +++ + S K G G++ N + G+D Sbjct: 1 MKK--IVAVICGLVVCLSMASAKK------KSSGKFVLGLDDSFPPLGFRDKNNEIVGYD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D R ++S + + P++ + + L + +ID + T R+ + +A Sbjct: 53 IDLAREVASRLGLELVC---QPIDWSTKEMELNTGKIDCIWNGLTLTEERKRA--MACSE 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Q ++ I S+S L G I VQAG++ + + + F+ Sbjct: 108 PYLANAQVVVVRNNGEIKSLSDLKGKKIGVQAGSSAQEAIDGAPDFKKSLKEIVEFKENV 167 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 D D+ +P VIL + ++ A + + + Sbjct: 168 TALNDLEFGNLDGVVMDLVVAGYSITQGKKP--LVILDETLAPEEYGIAFSRKNKSLRDK 225 Query: 241 VSWTHYAMVTAE 252 V T M Sbjct: 226 VQKTLLEMQADG 237 >gi|294812666|ref|ZP_06771309.1| putative ABC transporter solute-binding protein [Streptomyces clavuligerus ATCC 27064] gi|326441179|ref|ZP_08215913.1| putative ABC transporter solute-binding protein [Streptomyces clavuligerus ATCC 27064] gi|294325265|gb|EFG06908.1| putative ABC transporter solute-binding protein [Streptomyces clavuligerus ATCC 27064] Length = 354 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 46/272 (16%), Positives = 91/272 (33%), Gaps = 17/272 (6%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDD 74 T + + + +I+KR L G++ + A GD GFD+D RA++ + D Sbjct: 81 SLTPSAADGPSVREIQKRRKLIVGVDQNSYRWGYRDPATGDLMGFDIDLARAIAEDLLDK 140 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 + + ++ +R LQ ++D++ R T R + + + GQ + ++ Sbjct: 141 DGTVVFRAVSTDQRAPLLQEGKLDLVVRTMTITCKRAREVAFSTA--YFETGQQVLAPRQ 198 Query: 135 KGISS-VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA-------- 185 I+ + L G +C G+T L + + E+I Sbjct: 199 SKITGHDASLKGKKVCTAEGSTAFDALEENAYGAIFRDPGDGTAADEDILTVPNQLDCLV 258 Query: 186 -YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + DA D + P+ + P A G + V+ Sbjct: 259 RVQEGLADAVVTDSALAAGQAAQ--DPTVELKGPRFKKVEYYGVAAAPGKDDLVRRVNKV 316 Query: 245 HYAMVTAEE-LGITQKNINQ-VSKDTTNPDVQ 274 L Q + + + T P+ + Sbjct: 317 LEEYREDGRWLKAYQDWLAEDLPGVTEPPEAK 348 >gi|126739646|ref|ZP_01755338.1| putative ABC transporter periplasmic amino acid-binding protein [Roseobacter sp. SK209-2-6] gi|126719292|gb|EBA16002.1| putative ABC transporter periplasmic amino acid-binding protein [Roseobacter sp. SK209-2-6] Length = 267 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 50/242 (20%), Positives = 95/242 (39%), Gaps = 9/242 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L L I ++ + A L ++ RG L+CG+ AN + GFD Sbjct: 1 MLKKL--AALGLAIGLSSTGAAVADTLDNVVDRGTLRCGVVLDFPPIGYRDANNEPAGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V++C L++A+ D + LP+ ER + + + D++ T +L R ++G Sbjct: 59 VEYCADLAAALEVD---YEILPVTWAERLPVIVTGRADVVFGGTSDSLARARTVGFTIPY 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+ QG ++ + GI S + G + GT E ++ ++ Sbjct: 116 AIYY-AQGV-VNAESGIKSFDDVRGKRVAGAVGTVPEQEWLKIAGEWGEEHLYQGYQSEN 173 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E+ A + D +A+ + D +P + + + D W N Sbjct: 174 EVFLAVAQGKADIGLTTNTAVKPVTGQYDNVEAGPRMP--WTTDYTSVVGPRLDVTWLNY 231 Query: 241 VS 242 ++ Sbjct: 232 LN 233 >gi|172039490|ref|YP_001805991.1| glutamine-binding protein of glutamine ABC transporter [Cyanothece sp. ATCC 51142] gi|171700944|gb|ACB53925.1| glutamine-binding protein of glutamine ABC transporter [Cyanothece sp. ATCC 51142] Length = 260 Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 47/233 (20%), Positives = 86/233 (36%), Gaps = 10/233 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + ++ +I + + A+ L +IK+RG L + + N +G + Sbjct: 5 LTRKLVSMLIIGVIFNLGNSNLIAATLEEIKQRGKLIVAVKDNVRPLGFRNQNNQLQGLE 64 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + L+ I DP I P+ +ER + ++D+ R + P Sbjct: 65 IDLAKQLAQDILGDPQAIILQPVQNQERLQKVIDGEVDLAIARITINSSRGRLVNF--SP 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y DG G I + I +V LS I + ++T + +A + I + Sbjct: 123 YYYLDGTGIITN-NPRIRAVDHLSQGKIALLKRSSTIAVI----RAELPQAELIGVNSYQ 177 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 E + DA+ D S L P + LP +S L + +G Sbjct: 178 EALTLLETEQVDAFAADNSVLAGW--VQAYPQYYQ-LPVRLSGEGLGVVMPKG 227 >gi|218437188|ref|YP_002375517.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7424] gi|218169916|gb|ACK68649.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7424] Length = 261 Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 52/257 (20%), Positives = 103/257 (40%), Gaps = 11/257 (4%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 F ++++ + +S S A+ L +I +RG L GI + GD +GF++D Sbjct: 9 PFSIALVLVTTSLISSSSILAAPLDEIMRRGKLIVGIKDNVKPLGFKNEQGDLQGFEIDI 68 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 + L+ I P + P+N ER + +DI T R + Y Sbjct: 69 AQRLAQEILGSPDALVLRPVNNLERLEVVIEGTVDITIARVTITPSRSRV--VDMSHYYY 126 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 DG G + K + S+S ++ A I + ++T + + I +E Sbjct: 127 LDGTGL-VTKNPSMRSLSDVTSARIALLKNSSTIVAIKSELPNAQ----LIGVNSYQEAL 181 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 ++ D + D S L ++ +LP +S + L+ + +G ++ ++ + Sbjct: 182 TLLETNQADVFAADNSILAGWV---QDYPQYRLLPVRLSGAALSIVMPKG-LQYKSLHNR 237 Query: 244 THYAMVTAEELGITQKN 260 + A+ +E G Q+ Sbjct: 238 VNEAIARWQESGWLQER 254 >gi|324113638|gb|EGC07613.1| extracellular solute-binding protein 3 [Escherichia fergusonii B253] Length = 288 Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 48/266 (18%), Positives = 88/266 (33%), Gaps = 15/266 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V L L+ + +L +K+RG L G+ F+ +G GF+V+F + Sbjct: 36 VMALALVAGMSAKTFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 95 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + + + P +L SK+ID++ + R+ G Sbjct: 96 LAKHLGVEAT---LKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDF--STPYTVSG 150 Query: 127 QGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K I + + L G + V GT ++ + + ++ Sbjct: 151 IQALVKKGNEGTIKTANDLKGKKVGVGLGT----NYEEWLRQNVQGVDIRTYDDDPTKYQ 206 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 R R DA D L AL L + D S+ A+ + + + V+ Sbjct: 207 DLRVGRIDAILVDR--LAALDLVKKTKDTLAVTGDAFSRQESGVAVRKNNEDLLKAVNEA 264 Query: 245 HYAMVTAEELGITQKNINQVSKDTTN 270 M L + D T Sbjct: 265 IAEMQKDGTLQALSQ--KWFGADVTK 288 >gi|116493032|ref|YP_804767.1| amino acid ABC transporter periplasmic protein [Pediococcus pentosaceus ATCC 25745] gi|116103182|gb|ABJ68325.1| amino acid ABC transporter substrate-binding protein, PAAT family [Pediococcus pentosaceus ATCC 25745] Length = 273 Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 49/276 (17%), Positives = 98/276 (35%), Gaps = 20/276 (7%) Query: 1 MYKDFFVSILCLIILFFTSFS-----------TNASILGDIKKRGFLKCGINTGLVGFAE 49 M K+ + ++ + L S I+K + G++ V Sbjct: 1 MKKELKLFLVMALGLLIIPVLGGCGNSKKTTRAEPSSWETIQKNKKVVIGLDDSFVPMGF 60 Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 + NG G+D+D RA+ K+ + ++ L+++ ID++ T Sbjct: 61 REKNGQLAGYDIDLARAVFRQYG---IKVDFQTIDWSMNVTELRNQTIDLIWNGLTITDE 117 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY---FKA 166 R+ + L + Q ++ K GI+ ++ L S+ Q+G++ + D+ K Sbjct: 118 RQKA--LTLSEPYLTNQQIIVVKKSSGITKLADLKNKSVGAQSGSSGAQDIDDHPQILKN 175 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + PI+++ A+R D S++ I+ + Sbjct: 176 RIKNHDPILYDSFNNAFIDLNANRIQGLLIDSVYANYYIKHMSNSSDYRIIKSNMPSEQF 235 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQKNI 261 A I +G+TE + + EL I QK Sbjct: 236 AVGIKKGNTEVKQKIDQGINQLRADGELKRINQKWF 271 >gi|126457096|ref|YP_001076757.1| solute-binding family 1 protein [Burkholderia pseudomallei 1106a] gi|242312395|ref|ZP_04811412.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 1106b] gi|126230864|gb|ABN94277.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein, truncation [Burkholderia pseudomallei 1106a] gi|242135634|gb|EES22037.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 1106b] Length = 240 Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 37/217 (17%), Positives = 73/217 (33%), Gaps = 6/217 (2%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKI 78 +A L I + V F + GF D A+ + +I Sbjct: 15 HARTLKKIADTNRMTVSYRESAVPFCYLLTPHKAVGFSADLTDAVVDDVRKKLKMPGLQI 74 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 Y+P+ + R L + D+ +T T R + + ++ G ++ K I Sbjct: 75 AYIPVTRQNRNPLLVNDTYDLEGGSTTNTAARGQDVSFSMN--LFYAGTRVLVKKASRIR 132 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + L+G ++ AG+T E + Y H++ + + + R D Sbjct: 133 GYADLAGKTVATAAGSTNENVIRKYAADHHLDIDVVPAKDYAAGPRMVESDRTAVLALDD 192 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 L+ ++ P + D + P + +GD Sbjct: 193 VLLFGMRANAADPELLEVAGDALQVEPRGCMVRKGDP 229 >gi|229816604|ref|ZP_04446902.1| hypothetical protein COLINT_03661 [Collinsella intestinalis DSM 13280] gi|229807810|gb|EEP43614.1| hypothetical protein COLINT_03661 [Collinsella intestinalis DSM 13280] Length = 318 Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 49/248 (19%), Positives = 90/248 (36%), Gaps = 18/248 (7%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFD- 73 S S L IK RG L G+ + G+ A + G ++D C +++A+FD Sbjct: 66 GSAPASAPGSKLAAIKARGKLNAGVKKDVPGYGYYDPAARTYAGMEIDLCYQIAAAVFDV 125 Query: 74 ------DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + + + K R + + Q+D++ T R S D Sbjct: 126 TYDEARERELVSFTDVTPKTRGPLIDNDQLDVVCATYTITPERIESWDF--STPYRTDYV 183 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI--VFERVEEIDAA 185 G ++ K+ G + ++ L G I V G TT+ + K + P F I ++ Sbjct: 184 GLMVKKRSGFTRIADLDGRIIGVSQGATTQGLIEQMLKDEGIDARPEFLAFSGYPIIKSS 243 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDTEWYNIVSWT 244 A D + D S L + ++ P+ + A +G ++ +V Sbjct: 244 LDAGNIDCFAMDRSTLAGY----TNETVELLEPEVKFGEQNYGVATKKG-SDLSTVVDEC 298 Query: 245 HYAMVTAE 252 A + Sbjct: 299 VRACAASG 306 >gi|84496801|ref|ZP_00995655.1| glutamate-binding protein of ABC transporter system [Janibacter sp. HTCC2649] gi|84383569|gb|EAP99450.1| glutamate-binding protein of ABC transporter system [Janibacter sp. HTCC2649] Length = 280 Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 43/232 (18%), Positives = 88/232 (37%), Gaps = 11/232 (4%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 G +K GI G +K+ + G DVD + ++ + I+++ + +R Sbjct: 36 SAGKIKIGIKFDQPGLG-LKSGSSYSGLDVDVAKYVAKELGHAEGDIEFVQAPSAQRETL 94 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICV 150 + + Q+ ++ T R+ ++ A + GQ ++ I+ L+G +C Sbjct: 95 ISTGQVQMIFATYSITDKRKATVSFA--GPYFIAGQDLLVRADDTSITGPETLTGKKLCS 152 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 G+T+ + D F F E AA + DA T D + L + Sbjct: 153 VTGSTSAQNVKDKFP----GVQLQQFGTYSECVAALASKGIDALTTDNTILAGYAAQDQY 208 Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 + ++ S+ I +GDT ++ M+ + + QK ++ Sbjct: 209 KGKLKVVGKTFSEERYGVGIKKGDTALCGKINTALTKMIDSGDW---QKAVD 257 >gi|302558020|ref|ZP_07310362.1| glutamate-binding protein [Streptomyces griseoflavus Tu4000] gi|302475638|gb|EFL38731.1| glutamate-binding protein [Streptomyces griseoflavus Tu4000] Length = 281 Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 42/226 (18%), Positives = 78/226 (34%), Gaps = 11/226 (4%) Query: 43 GLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102 G K +G + GFDVD ++ + + +I+++ + +R AL + ++ Sbjct: 49 DQPGLGLKKPDGSFSGFDVDVATYVAKELGYEADQIEWVETKSADRENALARGDVKFIAA 108 Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162 T R+ + A Q ++ K I+ + L+ +C G+T+ + Sbjct: 109 TYSITDERKEKVDFA--GPYLLAHQDLLVKKDSDITEATDLNDKKLCSVTGSTSAQNVKK 166 Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222 F K E AA ++ DA T D S L + + +S Sbjct: 167 DFA---PKAQLKQVGTYSECVAALQSGAVDALTTDDSILAGFAAQEQYAGKFKLAGLKLS 223 Query: 223 KSPLAPAIIQGDTEWYNIVSWTH------YAMVTAEELGITQKNIN 262 + +GDTE + ++ A A E N Sbjct: 224 NENYGIGVKKGDTETTDKINAALEKMVGDKAWDKAVEANFGPAEYN 269 >gi|120612399|ref|YP_972077.1| extracellular solute-binding protein [Acidovorax citrulli AAC00-1] gi|120590863|gb|ABM34303.1| amino acid ABC transporter substrate-binding protein, PAAT family [Acidovorax citrulli AAC00-1] Length = 302 Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 55/259 (21%), Positives = 95/259 (36%), Gaps = 19/259 (7%) Query: 9 ILCLIILFFTSFSTNASILG------DIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDV 61 L +A + IK+ G L+ G F+ + +G +GFD Sbjct: 33 AAAFDALVAQGPVASAETIAASPWASKIKQAGTLRLGGTQTSNLFSLLNEKDGKLRGFDA 92 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + ++ I D SK+Q+ +N+ R L + Q+D++ T R + A Sbjct: 93 GLAQLITRYILGDASKVQFTQVNSSTREQVLINGQVDMVVATYSITPARAEKISFA--GP 150 Query: 122 TYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G ++ + I SV+ L G + QAG+T LA + K F+ + Sbjct: 151 YYTSQAGVLVKASNQAIQSVNDLGGRKVATQAGSTGPAILAQFAP----KSTVQEFQTHQ 206 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E A R R AY D + L ++ P ++ P + +G Sbjct: 207 EALDALRQGRVAAYVTDHTLLLNTLSLGTADAKLAGAP-FGAQDPYGIGLPKGSDG---- 261 Query: 241 VSWTHYAMVTAEELGITQK 259 V++ + + E G K Sbjct: 262 VAFVNAFLKKIEADGTWAK 280 >gi|17549152|ref|NP_522492.1| amino-acid-binding periplasmic ABC transporter protein [Ralstonia solanacearum GMI1000] gi|17431403|emb|CAD18082.1| probable amino-acid-binding periplasmic abc transporter protein [Ralstonia solanacearum GMI1000] Length = 280 Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 50/263 (19%), Positives = 95/263 (36%), Gaps = 15/263 (5%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRAL 67 + L L SF A +I+K L+CG + FA + GFDVD C+AL Sbjct: 10 LTVLACLCAASFPVLADQWAEIQKNKALRCGTFADVPPFAAPDPKTREMVGFDVDLCQAL 69 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + + PL+ + R ++ ++D+ N +TL R + Y + Sbjct: 70 ARHLG---VAARITPLSVEARVPEVKMGRVDVTVANLAYTLGRAEQIQF--SDPYYLAKE 124 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 + S + G + G+T+EL++ P+ F+ A + Sbjct: 125 MLAVRASDPGKSKADYKGKRLAAAKGSTSELSIKMN------GSEPVTFQDTGSAYMAVQ 178 Query: 188 AHRCDAYTGDISALYALKLTNDRPS-EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + + + L + E ++ + + P+ + +G+ V+ Sbjct: 179 QGKALGIVSNTMTITKLVNQSKTGGIELKMIAEPMIYQPIGVGMKKGEPALLAKVNEALL 238 Query: 247 AMVTAEELGITQKNINQVSKDTT 269 AM A E I Q + +T Sbjct: 239 AMDKAGE--INQLWNKWLGPNTE 259 >gi|222081147|ref|YP_002540510.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221725826|gb|ACM28915.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 267 Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 49/256 (19%), Positives = 92/256 (35%), Gaps = 10/256 (3%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + ++ + + +A+ L DI RG ++ G+ TG V G+ G+DVD Sbjct: 8 RGIMAAVGIVATGLLATTQAHATTLNDIVSRGKVRIGVLTGAPPMGMVDEKGNPAGYDVD 67 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 ++ + ++ +PL R ALQ+ ++D L T R ++ Sbjct: 68 VANLIAGYLSLP---VELVPLTPPSRIPALQTGKVDFLVATLAPTGERAKTVMFTQPYSA 124 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 + I + + +S L G + V G++ E L KA +V+E Sbjct: 125 F--NMDIISGPDQKFTQLSDLQGKRVAVNRGSSQETALR---KAAVPGLEIVVYEDDSTS 179 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A A + DA + + RP + + + + A D E ++ Sbjct: 180 AQALIAGQTDAAAVPSTV--GEAIIKQRPDAGLQVGFTFFQQGNSMATKIDDFELRQWLN 237 Query: 243 WTHYAMVTAEELGITQ 258 Y M + +L Sbjct: 238 TAIYLMKVSGDLDKIS 253 >gi|330977202|gb|EGH77159.1| cystine transporter subunit [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 265 Score = 149 bits (377), Expect = 6e-34, Method: Composition-based stats. Identities = 51/258 (19%), Positives = 91/258 (35%), Gaps = 11/258 (4%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F ++ ++ + L IK G L G+ F+ V +G GF+V+F Sbjct: 11 LFSAMGLMLGAGIAGQAMAGEQLQKIKDSGTLNVGLEGTYPPFSFVDESGKLTGFEVEFS 70 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 AL+ + K + P AL SK++D++ + R+ + P T Sbjct: 71 EALAKELG---VKAKIQPSKWDGILAALDSKRLDVVINQVTISDERKKKYDFSE-PYTVS 126 Query: 125 DGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 Q ++ K I S L+G + V GT ++ KA+ ++ Sbjct: 127 GIQALVLKKNEDAIKSAKDLTGKKVGVGLGT----NYEEWLKANVPGAIVKTYDDDPSKI 182 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 R DA D L AL++ ++ V D S+ A+ +G+ E + Sbjct: 183 QDLSVGRIDAILVDR--LAALEMAAKTKNKLVPAGDAFSRQESGIALRKGEPELLAAIDK 240 Query: 244 THYAMVTAEELGITQKNI 261 + L + Sbjct: 241 AIDKLRADGTLKKLSEKY 258 >gi|159026223|emb|CAO86379.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 299 Score = 149 bits (377), Expect = 6e-34, Method: Composition-based stats. Identities = 61/308 (19%), Positives = 119/308 (38%), Gaps = 24/308 (7%) Query: 1 MYKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K V + C++ +F S S +++ + + GFL G + ++ V G+ G+ Sbjct: 1 MKKILQLVGLGCILPMFLASASLAETVVEKVARTGFLTVGTRFDAIPYSYVNDKGELVGY 60 Query: 60 DVDFCRALSSAI---FDDPSKIQYLPLN-AKERFLALQSKQIDILSRNTDWTLLREISLG 115 +D + + P +Q + N E+ ++S IDI +T +T R + Sbjct: 61 SMDVLERIRKRLETRLGRPVTLQMIEANQPGEKINLIRSGDIDIAC-STAFTWERAKVVD 119 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + G + K +S+ L G I + + + + Sbjct: 120 FSISYS--ISGIRILAKKGSNLSTPQSLIGKRIALVPTSAAVDVIKLVQPQATI---VTT 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI-ISKSPLAPAIIQGD 234 + VEE A + + DA GD +L L D P + I+P+ ++ +A + + + Sbjct: 175 YSTVEEALEALKTGKIDAIAGDSISLAGTILR-DNPKIYEIVPEEALANFGIACMVPENN 233 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKD 294 + + + V+ YA+V + IT T + R+ G I L L Sbjct: 234 STFLDDVN---YAIVKMMQDYITNDT-------ATVSQIDRWFGSQGMVPIPPEL-LKGF 282 Query: 295 WTYRIIRH 302 + +++I H Sbjct: 283 FAFKVIEH 290 >gi|264678000|ref|YP_003277907.1| glutamate-binding protein precursor [Comamonas testosteroni CNB-2] gi|262208513|gb|ACY32611.1| glutamate-binding protein precursor [Comamonas testosteroni CNB-2] Length = 300 Score = 149 bits (377), Expect = 6e-34, Method: Composition-based stats. Identities = 53/254 (20%), Positives = 93/254 (36%), Gaps = 19/254 (7%) Query: 14 ILFFTSFSTNASILG------DIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRA 66 L +A+ + IK+ G L+ G F+ + +G +GFD+ + Sbjct: 36 ALVAQGPVADAATIASSTWASKIKQAGTLRLGSTQTSNLFSLLNEKDGKIRGFDLGLAQL 95 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 ++ I D +K Q+ + + R L + Q+D++ T R + A Y Sbjct: 96 ITRYILGDAAKYQFTQVTSSTREQVLINNQVDMVFATYSITPARAEKISFA--GPYYTSQ 153 Query: 127 QGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 G ++ K + S + L G + QAG+T LA Y F+ +E A Sbjct: 154 SGVLVKSNNKTVQSYNDLGGKKVATQAGSTGPAILAQYAPKA----VVQEFQTHQEALDA 209 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 R R DAY D + L + P ++ P + +G V++ + Sbjct: 210 LRQGRVDAYVTDYTLLLNALSLGTSNARLAGAP-FGAQDPYGVGLPKGSDG----VAFIN 264 Query: 246 YAMVTAEELGITQK 259 + E G K Sbjct: 265 TFLKKLEADGTWAK 278 >gi|169334518|ref|ZP_02861711.1| hypothetical protein ANASTE_00921 [Anaerofustis stercorihominis DSM 17244] gi|169259235|gb|EDS73201.1| hypothetical protein ANASTE_00921 [Anaerofustis stercorihominis DSM 17244] Length = 280 Score = 149 bits (377), Expect = 6e-34, Method: Composition-based stats. Identities = 50/299 (16%), Positives = 113/299 (37%), Gaps = 32/299 (10%) Query: 1 MYKDFFVSILCLIILFFTSFS-------TNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M +++ ++ F+ N+S + +K+ G L G+ + Sbjct: 1 MKLKKVMAVTMAALMSLAVFAGCGNKDNANSSEVKLVKE-GTLTVGLEASYPPMEYIDEK 59 Query: 54 -GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G+ GFD++ +A++ + +++++ + F L + + D+ ++ ++ Sbjct: 60 TGELAGFDIELAKAIAKDMG---LEVEFVQVGFDAIFAGLDADKYDVAISA--ISVNKDR 114 Query: 113 SLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 LA + Q I K I SV +LSG + VQ GTT + Y + +++ Sbjct: 115 QETLALSDTYLANQQVVISAKDGKQIKSVKELSGKKVAVQVGTTADEACQYYQEKEGLEF 174 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + + A ++ D D + N+ P ++V D ++ P+A A Sbjct: 175 DLQQLDDMTAAFLALKSGNVDCVVTD--LVVGDYYVNNFPKDYVKSCDKLTNEPIAIAAK 232 Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALG 290 + +T ++ + +++ + + K + G D + NI L Sbjct: 233 KSNTALIAEINKSLKSLIDSGKTSEISK---------------KLFGEDLTKNIDANLK 276 >gi|239908611|ref|YP_002955353.1| bacterial extracellular solute-binding protein [Desulfovibrio magneticus RS-1] gi|239798478|dbj|BAH77467.1| bacterial extracellular solute-binding protein [Desulfovibrio magneticus RS-1] Length = 270 Score = 149 bits (377), Expect = 6e-34, Method: Composition-based stats. Identities = 54/254 (21%), Positives = 89/254 (35%), Gaps = 24/254 (9%) Query: 1 MYKDFFVSILCLIILFFTSFST---------NASILGDIKKRGFLKCGINTGLVGFAEVK 51 M + V L + L + S L I KRG L G+ F V Sbjct: 1 MIRFIRVVCLAFVALTMCCGTALAITPYDIYEGSALRQIVKRGKLVVGMELKFWPFEYVD 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G GFDVD + L+ + + ++ + AL S +ID++ TL R Sbjct: 61 EKGKPVGFDVDIAKTLAERLGVE---LEIKDMEWTGLIPALTSGKIDLIISGITGTLERA 117 Query: 112 ISLGLAFRPITYFDGQGFI--MHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAH 167 ++ + G + + K ++ + L G I V+ GTT ++ A F Sbjct: 118 KTITF--SSPYFTTGLCILASVQKAPDLTDAAGLDKPGRVIAVKTGTTADIVAAKRFPKA 175 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 ++ A A R DA+ D ++ K P L + P Sbjct: 176 ----TINRYQDETACAADVAAGRADAFIYDQISIA--KHQKQHPETTKALLTPFTYEPFC 229 Query: 228 PAIIQGDTEWYNIV 241 A+ +GD + + V Sbjct: 230 IAMQKGDFDLWQYV 243 >gi|167743916|ref|ZP_02416690.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei 14] Length = 240 Score = 149 bits (377), Expect = 6e-34, Method: Composition-based stats. Identities = 37/217 (17%), Positives = 73/217 (33%), Gaps = 6/217 (2%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKI 78 +A L I + V F + GF D A+ + +I Sbjct: 15 HARTLKKIADTNRMTVSYRESAVPFCYLLTPHKAVGFSADLTDAVVDDVRKKLKMPGLQI 74 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 Y+P+ + R L + D+ +T T R + + ++ G ++ K I Sbjct: 75 AYIPVTGQNRNPLLVNDTYDLEGGSTTNTAARGQDVSFSMN--LFYAGTRVLVKKASRIR 132 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + L+G ++ AG+T E + Y H++ + + + R D Sbjct: 133 GYADLAGKTVATAAGSTNENVIRKYAADHHLDIDVVPAKNYAAGPRMVESDRTAVLALDD 192 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 L+ ++ P + D + P + +GD Sbjct: 193 VLLFGMRANAADPELLEVAGDALQVEPRGCMVRKGDP 229 >gi|239928548|ref|ZP_04685501.1| glutamate binding protein [Streptomyces ghanaensis ATCC 14672] gi|291436873|ref|ZP_06576263.1| glutamate binding periplasmic protein [Streptomyces ghanaensis ATCC 14672] gi|291339768|gb|EFE66724.1| glutamate binding periplasmic protein [Streptomyces ghanaensis ATCC 14672] Length = 282 Score = 149 bits (377), Expect = 6e-34, Method: Composition-based stats. Identities = 39/221 (17%), Positives = 76/221 (34%), Gaps = 8/221 (3%) Query: 33 RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92 + + GI G + G + GFDVD ++ + D +I++ + +R L Sbjct: 41 KKKITIGIKFDQPGLGQKTPQG-YAGFDVDVATYVAKKLGYDEKQIEWKESKSADRETML 99 Query: 93 QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQ 151 Q +D ++ T RE + A Q ++ I S L+ A +C Sbjct: 100 QRGDVDFIAATYSITPEREAKVDFA--GPYLLAHQDVLIRADDDSIKSPEDLNDAKLCSV 157 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 G+T+ + D K + + DA T D S L + Sbjct: 158 TGSTSAQNVKD---KLAPKAQLQPYPTYSACLPGLQNGAVDALTTDDSILAGYAAQDQFK 214 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 + + ++ + +G ++ ++ AMV+ Sbjct: 215 GKFKLGGFKLTNENYGIGVKKG-SDLKAKINDALEAMVSDG 254 >gi|54308668|ref|YP_129688.1| hypothetical protein PBPRA1475 [Photobacterium profundum SS9] gi|46913097|emb|CAG19886.1| hypothetical binding protein component ofABC transporter [Photobacterium profundum SS9] Length = 265 Score = 149 bits (377), Expect = 6e-34, Method: Composition-based stats. Identities = 53/273 (19%), Positives = 106/273 (38%), Gaps = 22/273 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + ++ ++ T IL DI K G L+ + G + F NG + GFD Sbjct: 1 MRKLLGGIVAAVALMSTSAAVTAGPILDDIAKSGELRVCFDAGYMPFEMKSKNGSFIGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLN--AKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 +D + ++ + ++Y+P+N L + + +++ R + + A Sbjct: 61 IDIGKQMARQMG-----VKYVPINTAWDGIIPTLLTGKCHMINAGMTINAQRNMRVNFAD 115 Query: 119 RPITYFDGQGFIMHK--KKGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPI 174 GQ +++ + I+S L+ + +I + GTT E + Sbjct: 116 --PYIVIGQSILINPELEGEITSYKDLNDSKYTIATKLGTTGEQAIKRMISKA----KLN 169 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 VFE + + DA+ D+ ND + + L + PL AI QGD Sbjct: 170 VFETQSDAVLEVANGKADAFIYDMPFNAIYASQND--GKVIHLEQPFTYEPLGWAIAQGD 227 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 ++ N ++ + + G + ++ K+ Sbjct: 228 SDMLNFLN---NFLRQIKGDGTYDRVYDKWFKN 257 >gi|328885478|emb|CCA58717.1| glutamate binding periplasmic protein [Streptomyces venezuelae ATCC 10712] Length = 273 Score = 149 bits (377), Expect = 6e-34, Method: Composition-based stats. Identities = 41/235 (17%), Positives = 78/235 (33%), Gaps = 9/235 (3%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 + GI G +G + GFDVD + ++ + KI + + ER +++ Sbjct: 35 KITVGIKFDQPGLGLKTPDGTYAGFDVDVAKYVAKELGFAEDKINWKQAPSAERENLIKN 94 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAG 153 + + + R + A + Q ++ I+ V L+ +C G Sbjct: 95 GDVKFVVASYSINEKRLKEVDFA--GPYFVTHQDLLVRADDSSITKVEDLNSKKLCSVTG 152 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 +T+ + + K E R DA T D S L + + Sbjct: 153 STSAQNVKE---KLAPKADLQQLGGYSECLTGLENKRVDALTTDASILAGYASQKEHQGK 209 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 + +S I +GD+E ++ MV+ G K + Q + Sbjct: 210 FKLAGLSLSNENYGIGIKKGDSELKGKINKALEKMVS---DGTWDKLVKQHFGPS 261 >gi|164688274|ref|ZP_02212302.1| hypothetical protein CLOBAR_01919 [Clostridium bartlettii DSM 16795] gi|164602687|gb|EDQ96152.1| hypothetical protein CLOBAR_01919 [Clostridium bartlettii DSM 16795] Length = 284 Score = 149 bits (377), Expect = 6e-34, Method: Composition-based stats. Identities = 55/280 (19%), Positives = 97/280 (34%), Gaps = 20/280 (7%) Query: 1 MYKDFFVSILCLIILFF----------TSFSTNASILGDIKKRGFLKCGINTGLVGFAEV 50 M K ++++ ++ L +S S N L + +G L G++ Sbjct: 8 MKKLSVIALVLMLGLSTFLGGCSSSSSSSSSANDDSLKYVMDKGELIVGLDDAFPPMGFR 67 Query: 51 KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 + + GFD+D + ++ + K+++ P+N + + L SK ID + T R Sbjct: 68 DDDNNIVGFDIDLAKEVAKRM---DIKVKFQPVNWQAKEQELSSKNIDCIWNGFGITPER 124 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 E L + Q F++ GI + L G I Q G+T T+ + + Sbjct: 125 EKV--LTISEPYMANPQIFVVLADSGIKTQDDLKGKVIAAQNGSTAYATIDKDTELKDSF 182 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPA 229 + E + DA D + A P ++ I+ D I + Sbjct: 183 KEFVGVEDNVKALMDLGVGGSDAVAMD--TVVARYYMAKDPGKYSIIKDTTILDEKMGVG 240 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 +GD V T M L K +D T Sbjct: 241 FRKGDNALCKKVEDTLKEMKKDGTLAKISK--EWFGEDLT 278 >gi|300784269|ref|YP_003764560.1| ABC transporter substrate-binding protein [Amycolatopsis mediterranei U32] gi|299793783|gb|ADJ44158.1| ABC transport system substrate-binding protein [Amycolatopsis mediterranei U32] Length = 308 Score = 149 bits (376), Expect = 6e-34, Method: Composition-based stats. Identities = 41/249 (16%), Positives = 86/249 (34%), Gaps = 11/249 (4%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + + +K G L G G G + GFD++ + +S+ + DP KI + Sbjct: 57 AGSPVFAKMKSAGALTVGAKDDQPGLGMKDPTTGKFGGFDIEIAKLVSAGLGFDPEKITF 116 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISS 139 +++ R + + ++ T R+ + A + GQ ++ K I+ Sbjct: 117 RTVDSGAREQTIANGDVNYYVGTYSITDKRKALVSFA--GPYFLAGQDLLVRKDDSSITG 174 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L G +C G+T + + + + F++ + ++ DA T D + Sbjct: 175 KDTLKGKKVCSVTGSTPIQKIRS--ENLTEPGNIVEFQKYSQCVEKLQSKDVDAVTTDDA 232 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L P ++ S + + D + V+ A + G QK Sbjct: 233 ILKGYAAQ--EPDSLKVVGQTFSTEKYGIGLNKDDKVLRDKVNDILQ---KALDDGTWQK 287 Query: 260 NINQVSKDT 268 + + Sbjct: 288 IYDATLGKS 296 >gi|322833412|ref|YP_004213439.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602] gi|321168613|gb|ADW74312.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602] Length = 280 Score = 149 bits (376), Expect = 6e-34, Method: Composition-based stats. Identities = 45/262 (17%), Positives = 94/262 (35%), Gaps = 16/262 (6%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDD 74 S A +L DI+ RG L C + + + F+ G DVD C AL+ + Sbjct: 17 MAAFSSAKADVLSDIQARGSLNCAVYSDVPPFSSPDPKTRQLAGMDVDLCTALAKQMG-- 74 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 K+ +P + + R + + + D+L N +T R + Y + ++ K Sbjct: 75 -VKLNLMPTSIEARIAVIATGRADVLIANLAYTKTRGQQIQF--SDPYYVAKEVLVVKKP 131 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 + + G I GTT+E ++ Y + F+ A ++ + Sbjct: 132 NVDKTRADFKGKRISATKGTTSEQSI--YLAGA----KAVTFQDAASAFLALEQNKAVGF 185 Query: 195 TGDISALYALKLTNDRPS-EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 + + + E ++ + ++ P+ + + + V+ + AM ++ Sbjct: 186 VTNTMTAIKMISQAGKDGIELGMIKEPMALEPIGVGMKKDEPALLAKVNSSLKAM---DD 242 Query: 254 LGITQKNINQVSKDTTNPDVQR 275 G K + T + R Sbjct: 243 DGTIDKIWDTWIGPNTEYKMVR 264 >gi|150403151|ref|YP_001330445.1| extracellular solute-binding protein [Methanococcus maripaludis C7] gi|150034181|gb|ABR66294.1| extracellular solute-binding protein family 3 [Methanococcus maripaludis C7] Length = 260 Score = 149 bits (376), Expect = 6e-34, Method: Composition-based stats. Identities = 51/267 (19%), Positives = 100/267 (37%), Gaps = 17/267 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGD--IKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 K + L + ++ F+ + + + K G L G + F E A+G+ GFD Sbjct: 5 KKLILLGLVVSLVAFSGCTEDQASAESSMTMKEGILVVGTDPTFPPFEEKNADGELVGFD 64 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + +IQ++ AL++++ D + T R + Sbjct: 65 IDLMKALGEKMG---LEIQFVEQPFDGIIPALKAEKFDCIISAVTITDDRAKEVAFTNS- 120 Query: 121 ITYFDGQGFIM--HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 YFD I + + SV L+G + Q GTT E Y A + + +E Sbjct: 121 --YFDAAQVIAVLVDDESVQSVDDLAGKVVAAQLGTTGEYEAQHY--AEELGFEIKSYEV 176 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + + R DA D A + + +P + ++ + ++ A + E Sbjct: 177 MADAFIDMENGRVDAVVTDDGV--AQRFLDTKPGFYKVVGEPMTAESYGLAANLDNQELI 234 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVS 265 + ++ A+ +E G + + Sbjct: 235 DALN---AALSEVKEDGTYDEIYAEWF 258 >gi|317506458|ref|ZP_07964259.1| extracellular solute-binding protein, family 3 [Segniliparus rugosus ATCC BAA-974] gi|316255219|gb|EFV14488.1| extracellular solute-binding protein, family 3 [Segniliparus rugosus ATCC BAA-974] Length = 508 Score = 149 bits (376), Expect = 7e-34, Method: Composition-based stats. Identities = 49/285 (17%), Positives = 98/285 (34%), Gaps = 14/285 (4%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 S + +L D K G L G+ G E + +G +G D+D +++ + I Sbjct: 18 SGAGTRDVLADAKA-GRLIIGVKFDQPGLGERRPDGSMRGLDIDVATYIAAELGVPEDHI 76 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGI 137 + + R L++ ++D + + + R + A + GQ ++ I Sbjct: 77 TWREAPSPNRENLLRNGEVDFIVASYSISGARLNVVDFA--GPYFHAGQSLLVRADDASI 134 Query: 138 SSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 ++V+ L+ G +C G+T + + + ++ A + DA T Sbjct: 135 TNVASLNSGKRLCSVTGSTPAQNI----RKNYPGVQLQQYDSYSACVEALHRGKIDALTT 190 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV--TAEEL 254 D L + P E ++ S + +G T ++ M A + Sbjct: 191 DDIILAGYAAQS--PGEFKLVGQPFSDELYGVGLARGQTPAKAQINAALQKMFDSAAWDA 248 Query: 255 GITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 + + P + LG K GL + +RI Sbjct: 249 AVLSAFGSSGIDPPARPAIGS-LGSVKPVKPAAPEGLWHKYGHRI 292 >gi|319784005|ref|YP_004143481.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169893|gb|ADV13431.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 260 Score = 149 bits (376), Expect = 7e-34, Method: Composition-based stats. Identities = 50/255 (19%), Positives = 89/255 (34%), Gaps = 13/255 (5%) Query: 1 MYKDFFVSILCLIILF--FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + F + ++L FT+ S A L IK G LK ++ F V + G Sbjct: 1 MNRVFSGIAVAALLLASTFTAVSARADDLEKIKAAGELKISMSGQYPPFNFVNDQNEVVG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD D +A++ I + + L + + D + + T RE + Sbjct: 61 FDADIGKAIAERIGVKGT---IITTAWDGIIAGLLTNKYDTVVGSMTITPEREKVVDF-- 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y G+ + ++ + S+ L G +I V G T E + + ++ Sbjct: 116 VGPYYHAGRAVFVSEQSKVQSLDDLKGKTIGVTLGETHEKWARE-----KGGWDIRTYKG 170 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS-PLAPAIIQGDTEW 237 + E+ RA R DA D + + PDI + + AI + + E Sbjct: 171 LPELLLELRAGRVDAIVVDNIPVMVAVKETGEKVRKLNTPDIEGGAVAIGIAIRKDNPEL 230 Query: 238 YNIVSWTHYAMVTAE 252 + M+ Sbjct: 231 KAAMQKALDDMLADG 245 >gi|289627074|ref|ZP_06460028.1| glutamine ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289646271|ref|ZP_06477614.1| glutamine ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. aesculi str. 2250] gi|298486960|ref|ZP_07005013.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298158522|gb|EFH99589.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330866809|gb|EGH01518.1| glutamine ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 277 Score = 149 bits (376), Expect = 7e-34, Method: Composition-based stats. Identities = 46/262 (17%), Positives = 94/262 (35%), Gaps = 15/262 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59 M + L L L + +A L D+ + L CG+ + F+ + G Sbjct: 1 MRMKSLLVALALSPLAVSV--AHADQLSDVMSKKSLSCGVYADVPPFSAPDPKTRELVGM 58 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD C+AL+ + + ++ PL+ + R ++ ++D++ N +T R + Sbjct: 59 DVDLCKALAKHMGVE---LELKPLSVEARIPEVKMGRVDVIFANLAYTKSRADQIQF--S 113 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + ++ S G I G+T+E ++ P+ F+ Sbjct: 114 DPYYIAKETLVVRAANADQPKSFFKGKRISSTKGSTSEQSIR------LADATPVTFQDT 167 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPS-EHVILPDIISKSPLAPAIIQGDTEWY 238 A + ++ + L E I + ++ P+ + QG+ + Sbjct: 168 GSAYMALQQNKVVGLVTNTMTAIKLVGQAKASGVELAIAKEPMALEPIGAGMRQGEPAFL 227 Query: 239 NIVSWTHYAMVTAEELGITQKN 260 V+ + AM A E+ Sbjct: 228 AKVNESLRAMEAAGEIDAIWAQ 249 >gi|313106245|ref|ZP_07792494.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa 39016] gi|310878996|gb|EFQ37590.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa 39016] Length = 273 Score = 149 bits (376), Expect = 7e-34, Method: Composition-based stats. Identities = 51/259 (19%), Positives = 91/259 (35%), Gaps = 7/259 (2%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 + A L DI + G L+C + A + GFDVD+C L+ A+ K Sbjct: 20 AGLAQADKLDDIIESGKLRCAVTLDFPPMGSRDAQNNPVGFDVDYCHDLAKAL---DVKA 76 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + + +R AL S + D++ +T TL R ++G++ + + + GI+ Sbjct: 77 EIVETPFPDRIPALVSGRADVIVASTSDTLERAKTIGMSIPYFAFVKV--VLTREDTGIA 134 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFERVEEIDAAYRAHRCDAYTGD 197 S L G + AGT L L KA K ++ + A DA Sbjct: 135 SYEDLKGRPVGGTAGTFEALALEKDSKAWGDAKGSFRAYQSEADTALAISQGHIDATVVS 194 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-I 256 + + + + +A + + N ++ V + Sbjct: 195 STVAASWIKSGKYKGLKIAGDAPYDIDYVALGAKRNEYGLLNYLNLFINQQVRTGRYAEL 254 Query: 257 TQKNINQVSKDTTNPDVQR 275 QK + + + T V R Sbjct: 255 AQKWVGGTAPELTTSAVYR 273 >gi|307319173|ref|ZP_07598603.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti AK83] gi|306895280|gb|EFN26036.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti AK83] Length = 266 Score = 149 bits (376), Expect = 7e-34, Method: Composition-based stats. Identities = 45/258 (17%), Positives = 90/258 (34%), Gaps = 12/258 (4%) Query: 3 KDFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + +S+LC L S A + IK G +K G+ F + AN G+D Sbjct: 5 RRMAISVLCAAALVAGLVSPVAAQTVEVIKSAGTVKVGMLVDFPPFGIMDANNQPDGYDA 64 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D + L+ + + + +P+ R LQS Q+D+L + T R ++ + Sbjct: 65 DVAKLLAKELGVE---VTIVPVTGPNRIPYLQSNQVDLLVASLGITEERAKNVDFSQ--P 119 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 G ++ L+G +I V +T + + + F+ Sbjct: 120 YAGISIGVFGAADLAVTKPEDLAGKTIGVARASTQDTAVTKIAPQ---DANIQRFDDDAS 176 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A + + + +S + A ++ P +S+ A+ +G E V Sbjct: 177 AVQALLSGQVELI--GVSNVVAAQIEAAAPGRFNQ-KLQLSQQVQGIAVRKGSNEMLKFV 233 Query: 242 SWTHYAMVTAEELGITQK 259 + + +L + Sbjct: 234 NGFLDKVKADGQLNAIHE 251 >gi|326792530|ref|YP_004310351.1| ABC transporter periplasmic protein [Clostridium lentocellum DSM 5427] gi|326543294|gb|ADZ85153.1| ABC-type transporter, periplasmic subunit family 3 [Clostridium lentocellum DSM 5427] Length = 260 Score = 149 bits (376), Expect = 7e-34, Method: Composition-based stats. Identities = 47/268 (17%), Positives = 95/268 (35%), Gaps = 22/268 (8%) Query: 1 MYKDFFVSILCLIILF--FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K + L L +F ++ + +K++ L + F + +G+ G Sbjct: 1 MLKKILLLGLSLCTMFSFVGCTNSTQTTYEKVKEKKELTFAMTGQYPPFNYIDESGELVG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD+D A++ + + + + L K+ D++ + T R + Sbjct: 61 FDIDIANAIADKMGVTA---KPETIAWEGIITGLTGKRFDMIIGSMAITEERLEKVSF-- 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y+DG + + I+ ++ L+ A + V GTT Y + + FE Sbjct: 116 SNPYYYDGAQLFVMQDSDIADINDLTNAKVGVVTGTT----FHSYLSENYPNLEILQFES 171 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH----VILPDIISKSPLAPAIIQGD 234 + A + R DA + PS++ + ++ + AI + D Sbjct: 172 DVDNLRALKQGRMDALVT------GKFVGLSAPSKYGINIKVAGTLLYFEEIGVAIRKED 225 Query: 235 TEWYNIVSWTHYAMVTAEE-LGITQKNI 261 E + V+ M+ I+QK Sbjct: 226 AELLDAVNTALQDMIDDGTYEEISQKWF 253 >gi|124027566|ref|YP_001012886.1| glutamine-binding periplasmic protein precursor [Hyperthermus butylicus DSM 5456] gi|123978260|gb|ABM80541.1| glutamine-binding periplasmic protein precursor [Hyperthermus butylicus DSM 5456] Length = 269 Score = 149 bits (376), Expect = 7e-34, Method: Composition-based stats. Identities = 43/218 (19%), Positives = 79/218 (36%), Gaps = 8/218 (3%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 L G + F + NG GFD++ R ++ D I+ ++ AL+ Sbjct: 39 LVVGTSPDFPPFEYIAKNGSVVGFDIELIRLVAKKAGYDD--IEIRTMDFDALIPALEQG 96 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI--SSVSQLSGASICVQAG 153 QID+++ T R+ + + Q ++ SV +LSG ++ VQ G Sbjct: 97 QIDVIAAGMTITEERKQRVDFTI--PYWQVDQAILVRADSEFRPKSVEELSGKTVGVQTG 154 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 TT L + + + + A R DA D A + Sbjct: 155 TTAADYLNKIVEEKGLNINIKEYSSYVLAVNDLIAGRIDAVMVDTPV--AKMFEKQYKDK 212 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 VI I + A+ +G+TE + ++ ++ + Sbjct: 213 LVISAVIETGEKYGFAVRKGNTELLDKLNKALEDIMNS 250 >gi|68535318|ref|YP_250023.1| putative extracellular solute-binding protein [Corynebacterium jeikeium K411] gi|260578467|ref|ZP_05846381.1| ABC superfamily ATP binding cassette transporter, binding protein [Corynebacterium jeikeium ATCC 43734] gi|68262917|emb|CAI36405.1| putative extracellular solute-binding protein [Corynebacterium jeikeium K411] gi|258603489|gb|EEW16752.1| ABC superfamily ATP binding cassette transporter, binding protein [Corynebacterium jeikeium ATCC 43734] Length = 361 Score = 149 bits (376), Expect = 7e-34, Method: Composition-based stats. Identities = 55/250 (22%), Positives = 97/250 (38%), Gaps = 21/250 (8%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 I +RG L G+ L +GD GF+VD R ++ IF DP++I++ + ++E Sbjct: 96 QIMRRGRLVVGVAQSLNRLGFRDPVSGDVAGFEVDLAREIARDIFGDPNRIEFRYVESRE 155 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 R AL+S +DI+ R TL R+ L + ++ I S + L + Sbjct: 156 RAEALKSGDVDIVVRTMSPTLSRQSKLEFSI--PYLQVHSRLLVLSDSQIESFNDLHNKT 213 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 +CV +T+ + + Y ++ + + A + + DA D + L L+ Sbjct: 214 VCVTRDSTSAVRVKQY-----DVGRLLLTQAWTDCLMAMQRFQADAIFTDDAILTGLRAQ 268 Query: 208 NDRPSEHVILPDIISKSPLA-----PAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN-I 261 + ++ D S + P + T V+ T + T KN Sbjct: 269 DP---YTTLVADAPETSYYSVAISPPGFPKNTTGLVMQVNSTMERIRRDG----TWKNLY 321 Query: 262 NQVSKDTTNP 271 N D P Sbjct: 322 NTWLADYLGP 331 >gi|327188021|gb|EGE55251.1| amino acid ABC transporter substrate-binding protein [Rhizobium etli CNPAF512] Length = 276 Score = 149 bits (376), Expect = 8e-34, Method: Composition-based stats. Identities = 52/263 (19%), Positives = 97/263 (36%), Gaps = 15/263 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWK-GF 59 +K ++ + I + A L IK RG L G+ F + + G+ Sbjct: 3 HKILPKALFAMSISLLAATQAFADATLDRIKARGALTVGVILSGAPFGYIDPTSQTQKGY 62 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 ++D +AL+ + K++ + + R LQ ++DIL N +T + + L + Sbjct: 63 NLDIAKALADDLG---VKLETITVTPPNRVQFLQQGKVDILIANMQYTE--DRAKVLDWV 117 Query: 120 PITYFDGQGFIM-HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 P Y G + K G+ + L G +CV G+ L + + A Sbjct: 118 PTPYDRSGGAAVGRKDSGLKDWADLKGKPVCVSQGSNYTQPLIEKYGA-----EVKGLPS 172 Query: 179 VEEIDAAYRAHRCDAYTGDISAL-YALKLTNDRPSEHVIL-PDIISKSPLAPAIIQGDTE 236 E A + C + L L+ + ++ IL P + S + +G+ E Sbjct: 173 QPESLLALQGGNCVVAVHVGATLGLLLQDRPEDWKDYAILFPTELIPSDSVIWVRKGEKE 232 Query: 237 WYNIVSWTHYAMVTAEELGITQK 259 + T + T+ +L K Sbjct: 233 TAEALDKTIRQLHTSGKLLEFAK 255 >gi|312958352|ref|ZP_07772873.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas fluorescens WH6] gi|311287416|gb|EFQ65976.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas fluorescens WH6] Length = 264 Score = 148 bits (375), Expect = 8e-34, Method: Composition-based stats. Identities = 55/262 (20%), Positives = 96/262 (36%), Gaps = 13/262 (4%) Query: 2 YKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + V L L + + + LG+IKK G +K G+ F+ V +G GF+ Sbjct: 7 RRTLLVGTLGLALGAGWLGQAVAGEQLGNIKKAGEIKIGLEGTYPPFSFVDESGKLSGFE 66 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ AL+ + K++ AL+SK++D + + R+ + +P Sbjct: 67 VELSEALAKELG---VKVKLQATPWDGILAALESKRLDAVVNQVTISEERKKKYDFS-KP 122 Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 T Q ++ K I + L+G + V GT E L D +K + Sbjct: 123 YTVSGIQALVLKKNVDTIKTADDLAGKKVGVGLGTNYEQWLKDNQPKAIIK----TYNDD 178 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R DA D L AL+ P + D S+ A+ +G+ E + Sbjct: 179 PTKFQDLKVGRIDAILIDR--LAALEYAKKAP-DTAAAGDAFSRQESGIALRKGEPELLD 235 Query: 240 IVSWTHYAMVTAEELGITQKNI 261 V+ + L + Sbjct: 236 AVNKALDKLRADGTLKKLSEKY 257 >gi|166364039|ref|YP_001656312.1| extracellular solute-binding protein [Microcystis aeruginosa NIES-843] gi|166086412|dbj|BAG01120.1| extracellular solute-binding protein [Microcystis aeruginosa NIES-843] Length = 260 Score = 148 bits (375), Expect = 8e-34, Method: Composition-based stats. Identities = 45/246 (18%), Positives = 88/246 (35%), Gaps = 11/246 (4%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 + ++ L I +RG L + L A + + G+ +G ++D + L+ I + I Sbjct: 16 APSFSADLDTIIRRGKLIVAVKNNLPPLAFLDSQGNLQGLEIDIAKRLAEEILGSDTAII 75 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 P++ +ER + ++D T R+ + P Y D GF + K Sbjct: 76 LKPVSNQERLQVVIDDRVDFAIARVAITPARQRLVDF--SPFYYLDSSGF-VTKNLLFQR 132 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L+ + I V G+TT + + +E DA+ D S Sbjct: 133 LEDLANSRIAVLNGSTTIALVRSHLPKA----TLRGVASYQEALNLLETGEIDAFAADNS 188 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L + LP + L + +G ++ ++ + A+ E G + Sbjct: 189 LLTGWVQQFPN---YRQLPIQLGAIALGVVLPKG-LQYQSLRERVNQAIERLESTGWLVE 244 Query: 260 NINQVS 265 +N Sbjct: 245 RVNYWG 250 >gi|302560614|ref|ZP_07312956.1| sugar-binding protein [Streptomyces griseoflavus Tu4000] gi|302478232|gb|EFL41325.1| sugar-binding protein [Streptomyces griseoflavus Tu4000] Length = 345 Score = 148 bits (375), Expect = 8e-34, Method: Composition-based stats. Identities = 40/241 (16%), Positives = 81/241 (33%), Gaps = 17/241 (7%) Query: 17 FTSFSTNASILGDIKKRG----FLKCGINTGLVGFAEVKANG----DWKGFDVDFCRALS 68 + + + +IK R L G++ + NG +GFD+D ++ Sbjct: 70 LSPSDADGRTIEEIKNRKGEKRKLIVGVDQNSYRWGYRDPNGGESGTLEGFDIDLVHRIA 129 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 I D IQ+ + +R A+Q+ ++D++ R + +AF + GQ Sbjct: 130 EDILGDRDAIQFKAIPTDQRIPAIQAGRVDMVVRTMTINC--DRIKDVAFSAPYFKTGQQ 187 Query: 129 FIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE---EIDA 184 + K I + L+ IC G+T L KA + + V + Sbjct: 188 VLAPKSAPIEGYDETLADQEICTATGSTAYAKLEADKKAGRLPESTGIGTTVPNQLDCLV 247 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + DA D + + + + + + A+ + + V+ Sbjct: 248 RLQLGEVDAVVTDGALAASQAAQDPT---VELKGEAFTTEYYGVAMRKDADDMVRRVNRI 304 Query: 245 H 245 Sbjct: 305 L 305 >gi|315640020|ref|ZP_07895146.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus italicus DSM 15952] gi|315484229|gb|EFU74699.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus italicus DSM 15952] Length = 267 Score = 148 bits (375), Expect = 8e-34, Method: Composition-based stats. Identities = 42/270 (15%), Positives = 93/270 (34%), Gaps = 11/270 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + +L ++ + ++ + + G++ V +G GFD Sbjct: 1 MKKWVSLVMLVASVVGLAACGSSEKTTESAADKKTVVVGLDDTFVPMGFKDDDGTIVGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A+ +K+++ P++ + L + ID++ R+ + + Sbjct: 61 VDLANAV---FALTDTKVKFQPIDWSMKETELANGTIDMIWNGYTMNDERKKKVTFSDS- 116 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL---ADYFKAHNMKYHPIVFE 177 + Q + K GI++V + G + Q G++ AD K ++ Sbjct: 117 -YMKNTQVLVTKKSSGITTVDGMKGKILGAQEGSSGYNVFTKQADVLKDIVQDEDATLYA 175 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E R D D S++ I+ ++ A + +GD + Sbjct: 176 SFNEAFIDLEHGRIDGLLVDNVYAGYYLKQAGTLSDYNIIETPYTQESFAVGVRKGDDKL 235 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKD 267 ++ + T +E G + + + D Sbjct: 236 AEKIN---EGLKTLKENGKYDEIVEKWFGD 262 >gi|71737113|ref|YP_274662.1| glutamine ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71557666|gb|AAZ36877.1| glutamine ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 277 Score = 148 bits (375), Expect = 8e-34, Method: Composition-based stats. Identities = 46/262 (17%), Positives = 94/262 (35%), Gaps = 15/262 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59 M + L L L + +A L D+ + L CG+ + F+ + G Sbjct: 1 MRMKSLLVALALSPLAVS--FAHADQLSDVMSKKSLSCGVYADVPPFSAPDPKTRELVGM 58 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD C+AL+ + + ++ PL+ + R ++ ++D++ N +T R + Sbjct: 59 DVDLCKALAKHMGVE---LELKPLSVEARIPEVKMGRVDVIFANLAYTKSRADQIQF--S 113 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + ++ S G I G+T+E ++ P+ F+ Sbjct: 114 DPYYIAKETLVVRAANADQPKSFFKGKRISSTKGSTSEQSIR------LADATPVTFQDT 167 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPS-EHVILPDIISKSPLAPAIIQGDTEWY 238 A + ++ + L E I + ++ P+ + QG+ + Sbjct: 168 GSAYMALQQNKVVGLVTNTMTAIKLVGQAKTSGVELAIAKEPMALEPIGAGMRQGEPAFL 227 Query: 239 NIVSWTHYAMVTAEELGITQKN 260 V+ + AM A E+ Sbjct: 228 AKVNESLRAMEAAGEIDAIWAQ 249 >gi|305663952|ref|YP_003860240.1| extracellular solute-binding protein family 3 [Ignisphaera aggregans DSM 17230] gi|304378521|gb|ADM28360.1| extracellular solute-binding protein family 3 [Ignisphaera aggregans DSM 17230] Length = 260 Score = 148 bits (375), Expect = 8e-34, Method: Composition-based stats. Identities = 41/221 (18%), Positives = 89/221 (40%), Gaps = 11/221 (4%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 ++ G + F + G+ G D+D + LS+ I D ++ + ++ AL + Sbjct: 39 KIRVGTSPDFPPFEYIDDKGNIVGIDIDMMKILSNKIGCD---MEIVSIDFNGLIPALIN 95 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQA 152 QID+++ T R + +AF + Q ++ K I+ S++ L + VQ+ Sbjct: 96 NQIDVIASGMTITEER--AKVVAFTKPYWSADQAIVIRKDANINPQSLNDLVNLRVGVQS 153 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 GTT E ++++ + + + ++ A R DA D + Sbjct: 154 GTTAEQMISEFVSSTGKNINMVSYQSYVLAIQDLLAGRLDAVVVDSPVANMFVKQYNVKI 213 Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 ++I + A+ + +TE N ++ + ++E Sbjct: 214 SNII----TTNESYGLAVRKDNTELLNKLNKALDEFLNSDE 250 >gi|167850938|ref|ZP_02476446.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei B7210] gi|167899540|ref|ZP_02486941.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei 7894] gi|167916216|ref|ZP_02503307.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei 112] gi|167924052|ref|ZP_02511143.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei BCC215] Length = 240 Score = 148 bits (375), Expect = 8e-34, Method: Composition-based stats. Identities = 37/217 (17%), Positives = 73/217 (33%), Gaps = 6/217 (2%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKI 78 +A L I + V F + GF D A+ + +I Sbjct: 15 HARTLKKIADTNRMTVSYRESAVPFCYLLTPHKAVGFSADLTDAVVDDVRKKLKMPGLQI 74 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 Y+P+ + R L + D+ +T T R + + ++ G ++ K I Sbjct: 75 AYIPVTRQNRNPLLVNDTYDLEGGSTTNTAARGQDVSFSMN--LFYAGTRVLVKKASRIR 132 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + L+G ++ AG+T E + Y H++ + + + R D Sbjct: 133 GYADLAGKTVATAAGSTNENVIRKYAADHHLDIDVVPAKNYAAGPRMVESDRTAVLALDD 192 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 L+ ++ P + D + P + +GD Sbjct: 193 VLLFGMRANAADPELLEVAGDALQVEPRGCMVRKGDP 229 >gi|229589723|ref|YP_002871842.1| putative ABC transporter exported solute-binding protein [Pseudomonas fluorescens SBW25] gi|229361589|emb|CAY48466.1| putative ABC transport system, exported solute-binding protein [Pseudomonas fluorescens SBW25] Length = 281 Score = 148 bits (375), Expect = 8e-34, Method: Composition-based stats. Identities = 48/237 (20%), Positives = 92/237 (38%), Gaps = 13/237 (5%) Query: 3 KDFFVSIL-CLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGF 59 K ++L LI+L ++ + A L I++R L G+ F + A +G Sbjct: 9 KRLLPAMLGALILLAASTTAAQADATLDKIEQRHVLVVGVLLSGGPFGGIDPATQKPRGL 68 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 +V+ + L + +++Q +P+ R LQ ++D+L N +WT R LG Sbjct: 69 NVELAQELGRQLG---AEVQLVPVLPANRVQFLQQGKVDLLIANMEWTPERGEILGFVPT 125 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 P G + K I+ L G +C G++ L + F+ Sbjct: 126 PFYRVGGTA-AVLKDSKITRWEDLKGQPVCTSQGSSYVKPLTEL------GVELKAFKSS 178 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E A R + C A D + + L + + + ++ +P +G+++ Sbjct: 179 SESLLALRGNNCVAAVHDATLVNPLIADSAEWQGYRTITPELNPAPSVIWTRRGESD 235 >gi|218548543|ref|YP_002382334.1| cystine transporter subunit [Escherichia fergusonii ATCC 35469] gi|218356084|emb|CAQ88701.1| cystine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia fergusonii ATCC 35469] Length = 266 Score = 148 bits (375), Expect = 8e-34, Method: Composition-based stats. Identities = 48/266 (18%), Positives = 88/266 (33%), Gaps = 15/266 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V L L+ + +L +K+RG L G+ F+ +G GF+V+F + Sbjct: 14 VMALALVAGMSAKTFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 73 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + + + P +L SK+ID++ + R+ G Sbjct: 74 LAKHLGVEAT---LKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDF--STPYTVSG 128 Query: 127 QGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K I + + L G + V GT ++ + + ++ Sbjct: 129 IQALVKKGNEGTIKTANDLKGKKVGVGLGT----NYEEWLRQNVQGVDIRTYDDDPTKYQ 184 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 R R DA D L AL L + D S+ A+ + + + V+ Sbjct: 185 DLRVGRIDAILVDR--LAALDLVKKTKDTLAVTGDAFSRQESGVAVRKNNEDLLKAVNEA 242 Query: 245 HYAMVTAEELGITQKNINQVSKDTTN 270 M L + D T Sbjct: 243 IAEMQKDGTLQALSQ--KWFGADVTK 266 >gi|89896133|ref|YP_519620.1| hypothetical protein DSY3387 [Desulfitobacterium hafniense Y51] gi|89335581|dbj|BAE85176.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 263 Score = 148 bits (375), Expect = 9e-34, Method: Composition-based stats. Identities = 44/271 (16%), Positives = 96/271 (35%), Gaps = 12/271 (4%) Query: 1 MYKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K V++ L+ L +++S ++++ + G++ G+ GF Sbjct: 4 MKKWVAVAMTVLMSGLLLAGCGSSSSAGDAVQQK--IVIGLDDTFAPMGFRDDGGNLVGF 61 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD + ++S + ++++ P++ + + L SK+ID++ T R + Sbjct: 62 DVDMAKEVASRL---DMEVEFKPIDWNSKEVELNSKKIDMIWNGLTITKERLEKIAF--S 116 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Q ++ I + + L+G + Q G+++ L + + Sbjct: 117 KPYMANRQIVVVLSGSDIKTKADLAGKVVGTQEGSSSVDALNAEPEVTGTFKELRTYADF 176 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R +A GD L N +P + D + + + DTE Sbjct: 177 VAVLNELSIGRVEAVVGDEVVLKYYM--NKKPGTFAAIEDNFGEEEYGVGLRKDDTELLG 234 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 + AM + K +D Sbjct: 235 KLQGALDAMKADGKSAEISK--KWFGEDIVK 263 >gi|330966438|gb|EGH66698.1| cystine transporter subunit [Pseudomonas syringae pv. actinidiae str. M302091] Length = 268 Score = 148 bits (375), Expect = 9e-34, Method: Composition-based stats. Identities = 59/263 (22%), Positives = 92/263 (34%), Gaps = 11/263 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + F S + L++ + A L IK G L G+ F+ V NG GF+ Sbjct: 7 RRTFLFSAMGLMLSAGIAGQAMAGEQLQKIKDSGTLNVGLEGTYPPFSFVDENGKLTGFE 66 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F AL+ + K + P AL SK++D++ + R+ + P Sbjct: 67 VEFSEALAKELG---VKAKVQPSKWDGILAALDSKRLDVVINQVTISDERKKKYDFSE-P 122 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 T Q ++ K I S LSG + V GT E L KA+ +E Sbjct: 123 YTISGIQALVLKKNADTIKSAKDLSGKKVGVGLGTNYEQWL----KANVPGAEIKTYEDD 178 Query: 180 EEIDAAYRAHRCDAYTGDI-SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R DA D +AL T + E + S+ A+ +G+ E Sbjct: 179 PTKIQDLSVGRIDAILVDRLAALEIAAKTKNTKRELAPAGEAFSRQESGIALRKGEPELL 238 Query: 239 NIVSWTHYAMVTAEELGITQKNI 261 + + L K Sbjct: 239 AAIDKAIDKLRADGTLEKLSKKY 261 >gi|299530123|ref|ZP_07043549.1| glutamate-binding protein precursor [Comamonas testosteroni S44] gi|298721780|gb|EFI62711.1| glutamate-binding protein precursor [Comamonas testosteroni S44] Length = 300 Score = 148 bits (375), Expect = 1e-33, Method: Composition-based stats. Identities = 53/254 (20%), Positives = 93/254 (36%), Gaps = 19/254 (7%) Query: 14 ILFFTSFSTNASILG------DIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRA 66 L +A+ + IK+ G L+ G F+ + +G +GFD+ + Sbjct: 36 ALVVQGPVADAATIASSTWASKIKQAGTLRLGSTQTSNLFSLLNEKDGKIRGFDLGLAQL 95 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 ++ I D +K Q+ + + R L + Q+D++ T R + A Y Sbjct: 96 ITRYILGDAAKYQFTQVTSSTREQVLINNQVDMVFATYSITPARAEKISFA--GPYYTSQ 153 Query: 127 QGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 G ++ K + S + L G + QAG+T LA Y F+ +E A Sbjct: 154 SGVLVKSNNKTVQSYNDLGGKKVATQAGSTGPAILAQYAPKA----VVQEFQTHQEALDA 209 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 R R DAY D + L + P ++ P + +G V++ + Sbjct: 210 LRQGRVDAYVTDYTLLLNALSLGTSNARLAGAP-FGAQDPYGVGLPKGSDG----VAFIN 264 Query: 246 YAMVTAEELGITQK 259 + E G K Sbjct: 265 AFLKKLEADGTWAK 278 >gi|300313169|ref|YP_003777261.1| amino acid transport periplasmic protein [Herbaspirillum seropedicae SmR1] gi|300075954|gb|ADJ65353.1| ABC-type amino acid transport periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 268 Score = 148 bits (375), Expect = 1e-33, Method: Composition-based stats. Identities = 55/281 (19%), Positives = 104/281 (37%), Gaps = 21/281 (7%) Query: 1 MYKDF-FVSILCLIILFFTSFSTNASILG--DIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K F ++L F+ A DIK R + I+ G F A + + Sbjct: 1 MKKLLSFTRKAAAVVLGLACFAQAAHADALADIKARKKVLVAIDLGAPPFGMTNAKLEPQ 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G DV+ R L+ + + ++ + + R L + + D++ + T R+ + Sbjct: 61 GSDVETARLLAKDLGVE---LEIVQVTGPNRIPFLMTGKADMVISSFSITPERQKVVAFT 117 Query: 118 FRPITYFDGQ-GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 Y Q K + I S++ L G + V G + L + + F Sbjct: 118 Q---PYGASQFVVAAPKGENIKSLNDLVGKRVAVVRGNMQDSLLTPIAPK---GTNIVRF 171 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + AA + + DA S A+ PS+++ I P A + +G+ Sbjct: 172 DDDATVTAAIISGQVDALCTPNSLASAIAKQ--NPSKNLETKFAIKDIPYAIGLRKGEPA 229 Query: 237 WYNIVSWTHYAMVTAEEL-GITQKNINQVSKDTTNPDVQRF 276 ++ A + +L GI Q+ + + PD+ +F Sbjct: 230 LEKWLNEWISANLKNGKLPGIYQQWV-----GSPMPDLAQF 265 >gi|83719983|ref|YP_443031.1| amino acid ABC transporter periplasmic amino acid-binding protein [Burkholderia thailandensis E264] gi|167582027|ref|ZP_02374901.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia thailandensis TXDOH] gi|167620192|ref|ZP_02388823.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia thailandensis Bt4] gi|257139260|ref|ZP_05587522.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia thailandensis E264] gi|83653808|gb|ABC37871.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia thailandensis E264] Length = 264 Score = 148 bits (375), Expect = 1e-33, Method: Composition-based stats. Identities = 56/274 (20%), Positives = 103/274 (37%), Gaps = 20/274 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + K ++ + T+ + A +L ++K+RG L+ G+ F G+ GFD Sbjct: 6 LKKLLVAGLIGASFVAATAHA--ADLLDEVKQRGTLRIGLEGTFPPFNSKNPQGELVGFD 63 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A+++ + P +++ LQ+ + D++ T R+ +L P Sbjct: 64 VDIAKAIAAKLGVKP---EFVTTEWSGIIAGLQAGKFDVIVNQVGITDQRKQTLDF--SP 118 Query: 121 ITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + I K S+ L G + V G T + +A ++K +P Sbjct: 119 AYTYSSAQLIQRKDDARQFKSLEDLKGKKLGVALG-TNYMDMAKSVPGIDVKTYPGA--- 174 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E A R DA D L L + P ++ S +P +G+ ++ Sbjct: 175 -PEYLRDLAAGRLDAALNDRLMLAYLTKNSQLP--LRPGANVGSANPSGIPFRKGNPKFA 231 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSK-DTTNP 271 ++ AM E G K ++ D T P Sbjct: 232 KAIAD---AMTQLEADGTFTKISDKWFGIDVTKP 262 >gi|326797191|ref|YP_004315011.1| ABC-type transporter periplasmic subunit family 3 [Marinomonas mediterranea MMB-1] gi|326547955|gb|ADZ93175.1| ABC-type transporter, periplasmic subunit family 3 [Marinomonas mediterranea MMB-1] Length = 268 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 60/269 (22%), Positives = 100/269 (37%), Gaps = 20/269 (7%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 Y+ + L +S ++ AS + DI G LK G + F +G + GFD+ Sbjct: 5 YQKALTGLALASALVVSSQASAASAIDDILSSGELKVCFEAGYIPFEMKTKDGRYIGFDI 64 Query: 62 DFCRALSSAIFDDPSKIQYLPLN--AKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D + ++ ++ ++Y+P+N ALQ+K+ DI+ T R +S+ + Sbjct: 65 DIGKHMARSM-----DVKYVPINTAWDGIIPALQTKKCDIIMGGMTITASRNLSVMFSNS 119 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 I+ K I S L+ + +I Q GTT Y +FE Sbjct: 120 YISIGQTVVIKPELKGIIKSYKDLNKSEYTITSQIGTTGAEAARKYLPKA----TLDLFE 175 Query: 178 RVEEIDAAYRAHRCDAYTGDIS--ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + DA+ D+ ALYA + P L + PL AI Q D Sbjct: 176 TSADGVLQVANGKADAFVYDLPFNALYA----SQHPDTVEHLSTSFTYEPLGWAIRQDDP 231 Query: 236 EWYNIVSWTHYAMVTAEE-LGITQKNINQ 263 + N ++ + I K Sbjct: 232 NFLNFLNNYLSQIKNDGTYERIYSKWFES 260 >gi|254422605|ref|ZP_05036323.1| Bacterial extracellular solute-binding protein, family 3 [Synechococcus sp. PCC 7335] gi|196190094|gb|EDX85058.1| Bacterial extracellular solute-binding protein, family 3 [Synechococcus sp. PCC 7335] Length = 299 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 43/235 (18%), Positives = 94/235 (40%), Gaps = 8/235 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 + L I++ G +K + + F V + + G+D+D + ++ + ++++ +P+ Sbjct: 58 ATLEQIRESGQVKVAVPSDFPPFGFVNTSMEPIGYDIDMAKEIAKGL---NAELEIIPVV 114 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 R LQ+ ++D++ + R++ + + +F IS++ LS Sbjct: 115 GGYRIPFLQTDRVDMIISSLGKNDERDLIIDFSEPYAPFFSA--IYGGPTADISTIEDLS 172 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G SI V G+ +L ++ + +A + + DA + A Sbjct: 173 GRSIGVAQGSLEDLEISS-LTEDISNVDIKRYANNSLTASALVSGQVDAIATGN--VVAA 229 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 KL D P + I+ SP + +GDTE+ + ++ + L K Sbjct: 230 KLIRDNPGSEITSKFILKDSPCYVGVREGDTEFVDEINEIIAFTKRSGRLNEMSK 284 >gi|159027770|emb|CAO89640.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 260 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 47/246 (19%), Positives = 90/246 (36%), Gaps = 11/246 (4%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 + ++ L I +RG L + L A + + G+ +G ++D + L+S I S I Sbjct: 16 APSFSADLDTIIRRGKLIVAVKNNLPPLAFLDSQGNLQGLEIDIAKRLASEILGSDSAII 75 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 P++ +ER + ++D+ T R+ + P Y D GF + K + Sbjct: 76 LKPVSNQERLQVVIDDRVDLAIARVAITPARQRLVDF--SPFYYLDSSGF-VTKNPQLQR 132 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L+ + I V G+TT + +E DA+ D S Sbjct: 133 LEDLANSRIAVLNGSTTIALVRSNLPNAI----LRGVASYQEALNLLETGEIDAFAADNS 188 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L + LP + L + +G ++ ++ + A+ E G + Sbjct: 189 LLTGWVQQFPN---YRQLPIELGAIALGVVLPKG-LQYQSLRERVNQAIERLESTGWLAE 244 Query: 260 NINQVS 265 +N Sbjct: 245 RLNYWG 250 >gi|126641536|ref|YP_001084520.1| glutamate/aspartate transport protein [Acinetobacter baumannii ATCC 17978] Length = 219 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 36/198 (18%), Positives = 70/198 (35%), Gaps = 5/198 (2%) Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 K++Y + + R L + ID+ T + R+ +G + Y + Sbjct: 2 PGLKVEYKAVTSSTRIPELLAGNIDMECGTTTNSKQRQQQVGFSTN--YYATEVRMAVKA 59 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 GI S++ L+G ++ GTT++ + K + I + + A + R A Sbjct: 60 NSGIKSLADLNGKAVVTTQGTTSDKYIKMNEKGQAINVQNIYGKDHADSFAMMASGRAAA 119 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 + D + L L + P I+ ++S P I + D ++ I T + Sbjct: 120 FVMDDNILAGLIAKSSTPKAFAIVGPVLSSEPYGIMIAKDDPKFKAIADRTVN---NLWK 176 Query: 254 LGITQKNINQVSKDTTNP 271 G + P Sbjct: 177 TGQMDALYKKWFLSPIPP 194 >gi|221067529|ref|ZP_03543634.1| extracellular solute-binding protein family 3 [Comamonas testosteroni KF-1] gi|220712552|gb|EED67920.1| extracellular solute-binding protein family 3 [Comamonas testosteroni KF-1] Length = 300 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 53/254 (20%), Positives = 93/254 (36%), Gaps = 19/254 (7%) Query: 14 ILFFTSFSTNASILG------DIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRA 66 L +A+ + IK+ G L+ G F+ + +G +GFD+ + Sbjct: 36 ALVAQGPVADAATIASSTWASKIKQAGTLRLGSTQTSNLFSLLNEKDGKIRGFDLGLAQL 95 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 ++ I D +K Q+ + + R L + Q+D++ T R + A Y Sbjct: 96 ITRYILGDAAKYQFTQVTSSTREQVLINNQVDMVFATYSITPARAEKISFA--GPYYTSQ 153 Query: 127 QGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 G ++ K + S + L G + QAG+T LA Y F+ +E A Sbjct: 154 SGVLVKSNNKTLQSYNDLGGKKVATQAGSTGPAILAQYAPKA----VVQEFQTHQEALDA 209 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 R R DAY D + L + P ++ P + +G V++ + Sbjct: 210 LRQGRVDAYVTDYTLLLNALSLGTSNARLAGAP-FGAQDPYGVGLPKGSDG----VAFIN 264 Query: 246 YAMVTAEELGITQK 259 + E G K Sbjct: 265 AFLKKLEADGTWAK 278 >gi|220923582|ref|YP_002498884.1| family 3 extracellular solute-binding protein [Methylobacterium nodulans ORS 2060] gi|219948189|gb|ACL58581.1| extracellular solute-binding protein family 3 [Methylobacterium nodulans ORS 2060] Length = 275 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 40/250 (16%), Positives = 83/250 (33%), Gaps = 10/250 (4%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 L + A+ +IK RG + G+ T F A+ G+DVD Sbjct: 15 MLAGGLAAACGPIGPRAAAAATPDEIKARGRIVIGVLTDYPPFGGTDADQKPAGYDVDVA 74 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 R + ++ + ++ +P+ R L + ++D+L T R + + Sbjct: 75 RLFAKSLGVE---LELVPVTGPNRIPYLLTNKVDMLIATFGITAERSKQVLFSNPYSALS 131 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 + K ++ L G +I V +T + ++ + F+ Sbjct: 132 TY--VLGPKSLAVAKPEDLKGVTIGVARASTQDTAVSAVAP---PGTRIMRFDDDATTTQ 186 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 A + + + + L +LT D S + + + A + DT + + Sbjct: 187 ALISGQVQSIGASNTVLA--QLTKDYASLGIEPKFNLKEQANGMAFRKADTALRDRANAF 244 Query: 245 HYAMVTAEEL 254 + EL Sbjct: 245 IAEIAGNGEL 254 >gi|239982702|ref|ZP_04705226.1| glutamate binding protein [Streptomyces albus J1074] gi|291454550|ref|ZP_06593940.1| glutamate binding protein [Streptomyces albus J1074] gi|291357499|gb|EFE84401.1| glutamate binding protein [Streptomyces albus J1074] Length = 277 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 41/234 (17%), Positives = 78/234 (33%), Gaps = 12/234 (5%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 +K GI G + G + GFDVD ++ + +I++ + +R AL Sbjct: 38 TIKVGIKFDQPGIGQKTPQGTFTGFDVDVATYVAKELGYTEKQIEFKETPSADRENALSR 97 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 ++ ++ + RE + A Q ++ IS +L G ++C AG+ Sbjct: 98 GDVEFIAASYSINDEREAKVDFA--GPYLLAHQDLLIRADDKISKAEELDGKTLCSVAGS 155 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T+ + + F + E + DA T D S L + Sbjct: 156 TSAQNVKEKFAK---GAQLKEYGTYSECLEGLQTGAVDALTTDDSILAGYASQEQYKGKF 212 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV------TAEELGITQKNIN 262 + +S + +G + + ++ MV A E N Sbjct: 213 KLSGLSLSNENYGIGVKEG-SALKDKINKALEKMVEDGSWDKAVEANFGPANYK 265 >gi|260461007|ref|ZP_05809256.1| extracellular solute-binding protein family 3 [Mesorhizobium opportunistum WSM2075] gi|259033041|gb|EEW34303.1| extracellular solute-binding protein family 3 [Mesorhizobium opportunistum WSM2075] Length = 269 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 46/249 (18%), Positives = 87/249 (34%), Gaps = 8/249 (3%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 L + +A + DI RG L I+T + + AN GFD++ + Sbjct: 15 FVLALSALLPSIASAQSVEDIISRGKLVVAIDTTTPPYGFLDANLKPTGFDIEVANKMGE 74 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 A+ ++++ + + R AL +KQ+D + T R ++ + + Sbjct: 75 ALGVP---VEFVTVTSPGRIPALLTKQVDAVISIFSITPAR--AIQIDYSIPYAGQSAVV 129 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 I K I V+ L G + + G T E L N + F+ + A + Sbjct: 130 IAPKSTSIKGVADLVGKKVGLTRG-TGEDGLLTKAAEANPGIEILRFDDYSSLLQAMVSG 188 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 + DA G LK + + ++ + +G+ ++ +AM Sbjct: 189 QIDAMGGGDYGEIYLKKAQNGDAFEQ--KYVLKTFYFGIGVAKGNDNLRQWINTWLFAMK 246 Query: 250 TAEELGITQ 258 T L Sbjct: 247 TDGTLDALS 255 >gi|17546822|ref|NP_520224.1| amino-acid-binding periplasmic (PBP) ABC transporter protein [Ralstonia solanacearum GMI1000] gi|17429122|emb|CAD15810.1| probable amino-acid-binding periplasmic (pbp) abc transporter protein [Ralstonia solanacearum GMI1000] Length = 267 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 35/240 (14%), Positives = 81/240 (33%), Gaps = 10/240 (4%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 +A L +I+K G ++ I F + + +G+D+D ++ + K + Sbjct: 28 PAHADALANIQKAGVIRVAIPNDFPPFGSLGTDLKLQGYDIDMANLVAKELG---VKAEL 84 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +P+ + R L + ++D++ + R + + K I + Sbjct: 85 VPVTSTNRIPFLTTGKVDVVISSLGKNAERAKVIDFTQAYAPFPKS--VYGPKDVSIKTP 142 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + L+G +I V G+T +L L A +E +Y + T Sbjct: 143 ADLAGKTIGVTRGSTEDLALTAVAPA---SATIKRYEDNNATAQSYLIGQVQLVTLGNIV 199 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 A + + + + +P + +G+ V+ + + L + Sbjct: 200 --ANAVNERTRLRQLDVKFPVEDTPCYVGVAKGEPALLEKVNAAITKLKSDGRLNDLSQR 257 >gi|160901196|ref|YP_001566778.1| extracellular solute-binding protein [Delftia acidovorans SPH-1] gi|160366780|gb|ABX38393.1| extracellular solute-binding protein family 3 [Delftia acidovorans SPH-1] Length = 286 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 53/272 (19%), Positives = 102/272 (37%), Gaps = 14/272 (5%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFC 64 I + L T +A L IK+RG + G+ F + + G++ + Sbjct: 19 LTFIAAALALACTQARADA-TLDKIKQRGKVTIGVLVNGGPFGSIDPSTQQLVGWNPELA 77 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 RAL+ + + + + + R LQ+ ++D+L + + R +LG A P Sbjct: 78 RALAKGLGVEA---ELVQVQTATRVQFLQAGKVDLLIASMELNPDRAETLGYAPTPFYRV 134 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 G + K GI+ L G +CV G++ LA + A Y + Sbjct: 135 GGIA-AVRKGSGIARWEDLRGKPVCVSQGSSFAKPLASEYGAQVHGYK-----SSSDSLL 188 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHV--ILPDIISKSPLAPAIIQGDTEWYNIVS 242 A + C A D + +Y L +N +++ I +++ +P +G+ + V Sbjct: 189 ALKGGNCVAAVHDSTLIYPLLRSNPEWAQYSAPIAGEVL-PAPSVVWTRKGEADTIAAVD 247 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 L +K + + P++Q Sbjct: 248 KVVQDWHRTGWLIAAEKRVGIEPANPLLPELQ 279 >gi|85707349|ref|ZP_01038432.1| putative ABC transporter periplasmic amino acid-binding protein [Roseovarius sp. 217] gi|85668157|gb|EAQ23035.1| putative ABC transporter periplasmic amino acid-binding protein [Roseovarius sp. 217] Length = 268 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 51/276 (18%), Positives = 100/276 (36%), Gaps = 9/276 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ L+ + + + A L DI G L+C + + GFD Sbjct: 1 MKKMTLIA--ALLGMTSIAGTAQADKLDDIISSGTLRCAVVLDFPPMGMRDESNVPIGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+C L++A+ + + + ER AL S ++D+ +T TL R ++G Sbjct: 59 VDYCNDLAAALGVEA---EIVETPFPERIPALMSGRVDVGVASTSDTLERAKTVGF--SV 113 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + + GISS + G ++ AGT + L K ++ Sbjct: 114 PYFAFEMAVTANNATGISSYEGMKGFTVGAVAGTYEAIALEAQVKEWGEG-EFRPYQTQA 172 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 ++ A + DA + A + + V+ +A + + + N Sbjct: 173 DVFLALSQGQLDATVSTSTVAQANVQSGNFGDISVVGFAPFDTDYVALFAKRDEYGFLNY 232 Query: 241 VS-WTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 + + + + T + +K + P+V R Sbjct: 233 LDLFVNQQVRTGRYDELYEKWVGGEVPQLMVPNVYR 268 >gi|86357908|ref|YP_469800.1| amino acid ABC transporter substrate-binding protein [Rhizobium etli CFN 42] gi|86282010|gb|ABC91073.1| probable amino acid ABC transporter, substrate-binding protein [Rhizobium etli CFN 42] Length = 274 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 48/263 (18%), Positives = 94/263 (35%), Gaps = 13/263 (4%) Query: 2 YKDFF-VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + F +++ + +A+ + +IK +G + GI + V ++G GFD Sbjct: 5 RRQFLGMALATAAFATVGAAVASAATVEEIKAKGTIVVGIQGDNAPWGFVDSSGKQDGFD 64 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D + + K+Q+ PL R AL + ++DIL T R S+ Sbjct: 65 ADVATLFAKELG---VKVQFQPLAVANRIPALTTGKVDILFATMAMTEERAKSIQY--SK 119 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + K + + ++G I V ++ + + D A F+ Sbjct: 120 PYAANTISLYAAKADTAKTPADVAGWEIGVPKSSSQDKAITD---AVGSTATVRRFDDDA 176 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A + + A G++ Y +L P + D ++ G+ +W Sbjct: 177 STIQALVSGQVKAVGGNM--FYGQRLDAASPGTYERKIDFLTT-YNGVGTRLGEKDWNEA 233 Query: 241 VSWTHYAMVTAEEL-GITQKNIN 262 V+ + EL IT+K + Sbjct: 234 VNAFLDKIKANGELAAITKKWMK 256 >gi|152985442|ref|YP_001349486.1| putative ABC transporter binding protein subunit [Pseudomonas aeruginosa PA7] gi|150960600|gb|ABR82625.1| probable binding protein component of ABC transporter [Pseudomonas aeruginosa PA7] Length = 273 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 51/259 (19%), Positives = 92/259 (35%), Gaps = 7/259 (2%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 + A L DI + G L+C + A + GFDVD+C L+ A+ K Sbjct: 20 AGLAQADKLDDIIESGKLRCAVTLDFPPMGSRDAQNNPVGFDVDYCNDLAKAL---DVKA 76 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + + +R AL S + D++ +T TL R ++G++ + + + GI+ Sbjct: 77 EIVETPFPDRIPALVSGRADVIVASTSDTLERARTIGMSIPYFAFVKV--VLTREDTGIA 134 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFERVEEIDAAYRAHRCDAYTGD 197 S + L G + AGT L L KA K ++ + A DA Sbjct: 135 SYADLKGRPVGGTAGTFEALALEKDSKAWGDAKGSFRAYQSEADTALAISQGHIDATVVS 194 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-I 256 + + + + +A + + N ++ V + Sbjct: 195 STVAASWIKSGKYKGLKIAGDAPYDIDYVALGAKRNEYGLLNYLNLFINQQVRTGRYAEL 254 Query: 257 TQKNINQVSKDTTNPDVQR 275 QK + + + T V R Sbjct: 255 AQKWVGGKAPELTTSAVYR 273 >gi|313618405|gb|EFR90428.1| amino acid ABC transporter, amino acid-binding protein [Listeria innocua FSL S4-378] Length = 271 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 38/265 (14%), Positives = 92/265 (34%), Gaps = 11/265 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILG---DIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K ++++ +++L + S+ S IKK + G++ V + + Sbjct: 1 MKKGLLITVMAIVMLALGACSSGESKEDQWSRIKKDKEVVIGLDDSFVPMGFRDKDDNLV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D +A+ K ++ P++ + L++ ID++ T R+ + Sbjct: 61 GFDIDLAKAVFEEYG---IKAKFTPIDWTMKESELKNGSIDLIWNGYTVTDARKKQVAF- 116 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPI 174 + Q + K I+ S + ++ Q G ++ +A + P Sbjct: 117 -SKPYMKNEQVLVTLKSSNINKFSDMKDKTLGAQNGASSIDDMAKKPEVLTDIIKNNEPE 175 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +++ + R D D ++ I+ + A + + D Sbjct: 176 LYDTFDTAFIDLNNKRIDGLIIDEVYARYYIDKQKNKDDYTIITGGFDPTDFAVGMRKSD 235 Query: 235 TEWYNIVSWTHYAMVTAEELGITQK 259 E + ++ + ++ K Sbjct: 236 KELQSKINEVFEKLYKEGKMQEISK 260 >gi|320010776|gb|ADW05626.1| extracellular solute-binding protein family 3 [Streptomyces flavogriseus ATCC 33331] Length = 344 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 41/242 (16%), Positives = 80/242 (33%), Gaps = 15/242 (6%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFD 73 + + + I+KRG L G++ + +GFD+D A++ I Sbjct: 69 ASLPARDADGPNIQKIRKRGKLIAGVDQNSFQWGYRNPESRTLEGFDIDLVHAIAEDILG 128 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 D + + + +R AL++ ++D++ R R +AF + GQ + K Sbjct: 129 DRDAVIFRAIPTNQRIAALENDKVDVVVRTMTINCRR--IGQVAFSTAYFQAGQQVLAPK 186 Query: 134 KKGISSVSQ-LSGASICVQAGTTTELTLADY-FKAHNMKYHPIVFERVE--------EID 183 I ++ L G +C G+T L + F A H + + + Sbjct: 187 TSTIDGYNESLKGKRVCTAEGSTAYDALKEKSFGAVYEDEHDGTGQDEDLLTVPNQLDCL 246 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 + DA D + P+ + + A G + V+ Sbjct: 247 VRLQLGEVDAIVTDNALAAGQAAQ--DPAVELKGDKPFTTEYYGVAAKLGADDLVARVNH 304 Query: 244 TH 245 Sbjct: 305 VL 306 >gi|153011067|ref|YP_001372281.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC 49188] gi|151562955|gb|ABS16452.1| extracellular solute-binding protein family 3 [Ochrobactrum anthropi ATCC 49188] Length = 266 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 44/235 (18%), Positives = 82/235 (34%), Gaps = 11/235 (4%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 + DIK G +K G+ F + + + G+D D + L+ + D Q +P+ Sbjct: 28 QTVDDIKSAGKIKIGMLVDFPPFGIMNTSNEPDGYDADVAKLLAKELGVDA---QIVPVT 84 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 R LQS Q+D+L + T R S+ + G K ++ +LS Sbjct: 85 GPNRIPYLQSGQVDVLVASLGITEERAKSVDFSQ--PYAGISIGVFGPKDTVVTKPEELS 142 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G SI V +T + + + F+ A + + + + Sbjct: 143 GKSIGVARASTQDTAVTKVAPQ---DANIRRFDDDASAVQALLSGQVELIGLSNVVAAEI 199 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 + + I +S+ A+ +G TE V+ + EL + Sbjct: 200 EKAAPGRYDQKI---QLSQQVQGIAVRKGATEMLEFVNKFIEKAKSDGELNKIHE 251 >gi|16800916|ref|NP_471184.1| hypothetical protein lin1849 [Listeria innocua Clip11262] gi|16414351|emb|CAC97080.1| lin1849 [Listeria innocua Clip11262] Length = 271 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 41/273 (15%), Positives = 95/273 (34%), Gaps = 14/273 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILG---DIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K ++++ +++L + S+ S IKK + G++ V + + Sbjct: 1 MKKGLLITVMAIVMLALGACSSGESKEDQWSRIKKDKEVVIGLDDSFVPMGFRDKDDNLV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D +A+ K ++ P++ + L++ ID++ T R+ + Sbjct: 61 GFDIDLAKAVFEEYG---IKAKFTPIDWTMKESELKNGSIDLIWNGYTVTDARKKQVAF- 116 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPI 174 + Q + K I+ S + ++ Q G ++ +A + P Sbjct: 117 -SKPYMKNEQVLVTLKSSNINKFSDMKDKTLGAQNGASSIDDMAKKPEVLTDIIKNNEPE 175 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +++ + R D D ++ I+ + A + + D Sbjct: 176 LYDTFDTAFIDLNNKRIDGLIIDEVYARYYIDKQKNKDDYTIITGGFDPTDFAVGMRKSD 235 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 E + ++ A + G Q+ + D Sbjct: 236 KELQSKIN---EAFEKLYKEGKMQEISKKWFGD 265 >gi|158321614|ref|YP_001514121.1| extracellular solute-binding protein [Alkaliphilus oremlandii OhILAs] gi|158141813|gb|ABW20125.1| extracellular solute-binding protein family 3 [Alkaliphilus oremlandii OhILAs] Length = 284 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 46/270 (17%), Positives = 91/270 (33%), Gaps = 16/270 (5%) Query: 3 KDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 K + IL + I+ +TS ++S L +I++RG++ G++ G+ Sbjct: 21 KKYVFLILLMGIMLWTSACGSSSKAVSVDLKEIEERGYVVMGLDDTFAPMGFRNNAGELV 80 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D + + S + ++++ + + L S ID++ + R+ + Sbjct: 81 GFDIDLAKEVFSRV---DIEVRFQQIEWSMKETELNSGNIDLIWNGYSISDERKEKVDF- 136 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK--AHNMKYHPIV 175 + Q + I + L G + VQ G+T + Y ++ Sbjct: 137 -TKPYLENKQIIVTLADTKIEARDDLKGKKVAVQNGSTAYDAVMAYPDLVEEFSGGELVL 195 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F+ E A R +A D L L + + + + + Sbjct: 196 FDTNNEAFMDLEAGRTEAVVADE-VLARYYLKGRGEEKFKVAEEDFGDEEYGIGVRKTSK 254 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVS 265 E +V T M G K Sbjct: 255 ELLELVENTLDEMRA---DGTYDKIYGSWF 281 >gi|119387586|ref|YP_918620.1| extracellular solute-binding protein [Paracoccus denitrificans PD1222] gi|119378161|gb|ABL72924.1| amino acid ABC transporter substrate-binding protein, PAAT family [Paracoccus denitrificans PD1222] Length = 268 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 46/238 (19%), Positives = 90/238 (37%), Gaps = 7/238 (2%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 L DI G L+C + + GFDVD+C L++A+ K + + Sbjct: 23 DKLDDIIASGTLRCAVVLDFPPMGMRDESNTPVGFDVDYCNDLAAALG---VKAEIVETP 79 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 ER AL S ++D+ +T TL R ++G++ + + K GI+S + Sbjct: 80 FPERIPALMSGRVDVGVASTSDTLERAKTVGMSI--PYFAFEMAVTANDKSGIASFEDMK 137 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G ++ AGT + L K ++ ++ A + DA + + Sbjct: 138 GKTVGATAGTFEAIALEKQVKEWGEG-TFRPYQTQADVFLALSQGQLDATVSTSTVAQSN 196 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS-WTHYAMVTAEELGITQKNI 261 T + P V+ +A + + N ++ + + + T + +K + Sbjct: 197 VKTGNFPGISVVGKAPFDIDYVALFTNREEYGLINYLNLFVNQQVRTGRYAELYEKWV 254 >gi|319442374|ref|ZP_07991530.1| putative extracellular solute-binding protein [Corynebacterium variabile DSM 44702] Length = 369 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 43/237 (18%), Positives = 88/237 (37%), Gaps = 12/237 (5%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQ 79 +T + DI RG L G++ + G+ GF+VD ++ IF DP ++ Sbjct: 76 ATPEQRVPDIIDRGRLIVGVSQSMNQLGFRDPVTGEMAGFEVDIAHEIARDIFGDPDRVD 135 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 + + R AL+ +DI+ R+ T LR++++ + ++++ GI+S Sbjct: 136 FRYIEGDGRDEALRDGDVDIVIRSMTVTRLRQMNVEFSI--PYLTVSPRLLVNRNSGIAS 193 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L+ ++C +T+ +L ++ E + A + + DA D + Sbjct: 194 EEDLADKTVCATTRSTSAQSLTSI-----DHNRLLLTETWPDCLMAMQHGQVDAIYSDSA 248 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAI-IQGDTEWYNIVSWTHYAMVTAEELG 255 L L + ++ A A +V + + G Sbjct: 249 VLSGLLAQDPN---TELVGMSDHTDHYAVATAPPTIRNTAGLVRQVNTTLERLRSDG 302 >gi|307706788|ref|ZP_07643593.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus mitis SK321] gi|307617873|gb|EFN97035.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus mitis SK321] Length = 279 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 49/274 (17%), Positives = 100/274 (36%), Gaps = 18/274 (6%) Query: 3 KDFFVSILCLIILFFTSFSTN-----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 K + ++ + LF T+ + +++G + G + V + NG + Sbjct: 4 KKIALVLVSFLTLFLTACTQKVSDPKQDNWNKYQEQGTITIGFDNTFVPMGFEEKNGQYT 63 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D +A+S + K+Q+ P++ + LQ+ ID++ T R + + Sbjct: 64 GFDIDLAQAVSEKLGF---KVQFQPIDWDMKETELQNGTIDVIWNGYSATDERREKVAFS 120 Query: 118 FRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHP 173 I Y + Q ++ KK I SV + ++ QAG++ L D K Sbjct: 121 ---IPYMENQQVLVAKKSQQIRSVEDMKDKTLGAQAGSSGYLDFEAQPDLLKNRVKDQKA 177 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 ++ E + R DA D + +++ + P A + Sbjct: 178 NQYQSFNEALIDLKNDRIDALLIDRVYANYYLQSEGILNDYNVFPAGFESESFAVGVRPA 237 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 D ++ A + + G Q+ + + Sbjct: 238 DKRLLQALN---QAFIELYQEGKFQEISQKWFGE 268 >gi|107104175|ref|ZP_01368093.1| hypothetical protein PaerPA_01005248 [Pseudomonas aeruginosa PACS2] gi|296391926|ref|ZP_06881401.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa PAb1] Length = 259 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 56/265 (21%), Positives = 104/265 (39%), Gaps = 17/265 (6%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 +L + L + A + D KRG L+ G++ + F G GF+VD +A++ Sbjct: 2 VLGVCALVGVASVQAAGAVEDAVKRGTLRVGMDPTYMPFEMTNKRGQIIGFEVDLLKAMA 61 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 ++ K++ + + AL + + D++ T R L L F GQ Sbjct: 62 KSMG---VKLELVSTSYDGIIPALLTDKFDMIGSGMTLTQERN--LRLNFSEPFIVVGQT 116 Query: 129 FIMHK--KKGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K + I S L+ SI + GTT E+ F+ E Sbjct: 117 LLVRKELEGKIKSYKDLNDPQYSITSKIGTTGEIVARKLISKAKY----HGFDNEPEAVM 172 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + DA+ D S + ++ + V L + PLA + +GD Y+ +++ Sbjct: 173 DVVNGKADAFIYD-SPYNVVAVSKFGAGKLVYLDQPFTYEPLAFGLKKGD---YDSINFI 228 Query: 245 HYAMVTAEELGITQKNINQVSKDTT 269 + + E G Q+ ++ K+T Sbjct: 229 NNFLHQIREDGTYQRIHDKWFKNTE 253 >gi|326793193|ref|YP_004311014.1| ABC transporter periplasmic protein [Clostridium lentocellum DSM 5427] gi|326543957|gb|ADZ85816.1| ABC-type transporter, periplasmic subunit family 3 [Clostridium lentocellum DSM 5427] Length = 293 Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats. Identities = 42/241 (17%), Positives = 85/241 (35%), Gaps = 12/241 (4%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 +++L L G++ G+ GFDVD +A++ + KI++ Sbjct: 55 AASNVLDK----DTLIIGLDDTFAPMGFKDEKGEIVGFDVDLAKAVAEKLGK---KIEFQ 107 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 P++ + L+S ID + T R +AF + Q I I++ + Sbjct: 108 PIDWSMKETELKSGNIDFIWNGYSITDER--KEQVAFGTPYLKNRQIIITLADSPINTKA 165 Query: 142 QLSGASICVQAGTTTELTLADYFK--AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L + Q G+T + + A P+ +E ++ A R DA D Sbjct: 166 DLKDKVVGAQTGSTAVDAIETEPEVLATFKDGKPVTYETNNDVLMDLEAGRLDAVVADEI 225 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 + ++ ++ IL + + + + DT + + + +L K Sbjct: 226 IVKYY-ISKKGAEKYKILDEDFGEEEYGVGMRKEDTALVEAFNKAYAELKQEGKLAEISK 284 Query: 260 N 260 Sbjct: 285 T 285 >gi|150015935|ref|YP_001308189.1| extracellular solute-binding protein [Clostridium beijerinckii NCIMB 8052] gi|149902400|gb|ABR33233.1| extracellular solute-binding protein, family 3 [Clostridium beijerinckii NCIMB 8052] Length = 277 Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats. Identities = 49/271 (18%), Positives = 94/271 (34%), Gaps = 15/271 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKK------RGFLKCGINTGLVGFAEVKANGD 55 K V+I+ + + + NA+ + K + L G++ V NG+ Sbjct: 8 KKLTVVAIIATLGVSLVACGGNANKSSESKAAKSALDKDELVIGLDDTFVPMGFKNENGE 67 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFDVD A+ + K+++ ++ + L + ID++ T R+ + Sbjct: 68 IVGFDVDLANAVGKKL---NKKVKFQSIDWSMKETELNNGNIDLIWNGYSITDERKEKVE 124 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY--FKAHNMKYHP 173 + Q + I S + L+G + Q G+T + + Sbjct: 125 F--SKPYLSNTQVIVTLADSNIESKNDLAGKKVGAQNGSTAVDAVEAANGIEKTFDGGKL 182 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + FE A R DA D L + ++ IL D I +G Sbjct: 183 VTFEDNNAALMDLEAKRLDAIVVDE-ILARYYMKARGEEKYKILTDNFGSEKYGVGIKKG 241 Query: 234 DTEWYNIVSWTHYAMVTAE-ELGITQKNINQ 263 DT++ + +++ I++K Q Sbjct: 242 DTKFVEAFNKALDEVISDGTAADISKKWFEQ 272 >gi|107100709|ref|ZP_01364627.1| hypothetical protein PaerPA_01001736 [Pseudomonas aeruginosa PACS2] Length = 273 Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats. Identities = 50/259 (19%), Positives = 91/259 (35%), Gaps = 7/259 (2%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 + A L DI + G L+C + A + GFDVD+C L+ A+ K Sbjct: 20 AGLAQADKLDDIIESGKLRCAVTLDFPPMGSRDAQNNPVGFDVDYCNDLAKAL---DVKA 76 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + + +R AL S + D++ +T TL R ++G++ + + + GI+ Sbjct: 77 EIVETPFPDRIPALVSGRADVIVASTSDTLERAKTIGMSIPYFAFVKV--VLTREDTGIA 134 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFERVEEIDAAYRAHRCDAYTGD 197 S L G + AGT L L +A K ++ + A DA Sbjct: 135 SYEDLKGRPVGGTAGTFEALALEKDSRAWGDAKGSFRAYQSEADTALAISQGHIDATVVS 194 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-I 256 + + + + +A + + N ++ V + Sbjct: 195 STVAASWIKSGKYKGLKIAGDAPYDIDYVALGAKRNEYGLLNYLNLFINQQVRTGRYAEL 254 Query: 257 TQKNINQVSKDTTNPDVQR 275 QK + + + T V R Sbjct: 255 AQKWVGGTAPELTTSAVYR 273 >gi|209546622|ref|YP_002278540.1| family 3 extracellular solute-binding protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537866|gb|ACI57800.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 278 Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats. Identities = 39/272 (14%), Positives = 95/272 (34%), Gaps = 16/272 (5%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFC 64 ++S+ + + A L I L+C + FA + GFDVD C Sbjct: 5 YLSLTVAFVGMAAAVPAKADQLDTIMSAKTLRCATFADVPPFASPDPKTREMAGFDVDLC 64 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 A++ + K + P++ + R ++ ++DI N +TL R + Y Sbjct: 65 GAIAKELG---VKAEIKPVSVEARVPEVKLGRVDITVANLAYTLSRAEQIQF--SDPYYL 119 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 + I+ + +G + G+T+E+++ K P+ F+ Sbjct: 120 AKEMLIVPADDAGKQKADYAGQRLASTKGSTSEMSIK------LNKSDPLTFQDTASAYL 173 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHV-ILPDIISKSPLAPAIIQGDTEWYNIVSW 243 A + + + + + + ++ + + P+ + + ++ Sbjct: 174 AVQQGKARGMVANTMTTTKFVNESKSKGKEMRMIEEPMLYQPIGIGMAKDQPALTAKINE 233 Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 + + + E+ K ++ +T + R Sbjct: 234 ILHKLDASGEIN---KIWDKWLGPSTEYKMTR 262 >gi|311898837|dbj|BAJ31245.1| putative ABC transporter substrate-binding protein [Kitasatospora setae KM-6054] Length = 316 Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats. Identities = 48/267 (17%), Positives = 97/267 (36%), Gaps = 16/267 (5%) Query: 11 CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSS 69 C + + + +I+KRG+L G++ + + +G +GFD+D RA++ Sbjct: 56 CDTGVSLPPAQQAGARIQEIRKRGYLVVGVDQSAYNWGYRDSLSGKIEGFDIDLARAVAK 115 Query: 70 AIFDDPSKIQYLPLNAKERFLALQS--KQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 ++ D +K+ + +R LQ + ID++ R T R + + Q Sbjct: 116 SVLGDENKLVLKTIATADRVKLLQQQPQPIDLIVRAMTITCDRMKQIAF--SAPYFKVSQ 173 Query: 128 GFIMHKKKGISSV-SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 + K SV L G +C +++ L P + + Sbjct: 174 RVVAPKTAHADSVAKALGGKRVCAALNSSSHTELKANAHGAASIVTP---DNQLDCLVLM 230 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 DA D S A+ ++ + + + + + Q DT ++V W + Sbjct: 231 ELGEADATLSDSSLAAAMVAQDET---MELAGESFLPTYMGVGMNQRDT---DLVGWVNQ 284 Query: 247 AMVTAEELGITQKNINQVSKDTT-NPD 272 +V G Q ++ + + PD Sbjct: 285 VLVDWRNNGGWQAGYDRWLRSSMGKPD 311 >gi|307701962|ref|ZP_07638970.1| ABC transporter substrate-binding protein - glutamine transport [Streptococcus mitis NCTC 12261] gi|307616607|gb|EFN95796.1| ABC transporter substrate-binding protein - glutamine transport [Streptococcus mitis NCTC 12261] Length = 279 Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats. Identities = 52/274 (18%), Positives = 100/274 (36%), Gaps = 18/274 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 K + ++ L+ LF T+ + A +++G + G + V + NG + Sbjct: 4 KKIALVLVSLLTLFLTACTQKASDPKKDNWDKYQEQGTITIGFDNTFVPMGFEEKNGQYT 63 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D +A+S + K+Q+ P++ + LQ+ ID + T R + + Sbjct: 64 GFDIDLAQAVSEKLG---VKVQFQPIDWDMKETELQNGTIDAIWNGYAATDERREKVAFS 120 Query: 118 FRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHP 173 I Y + Q ++ KK I SV + ++ QAG++ L D K Sbjct: 121 ---IPYMENQQVLVAKKSQQIRSVEDMKDKTLGAQAGSSGYLDFEAQPDLLKNRVKDQKA 177 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 ++ E + R DA D + S++ + A + Sbjct: 178 NQYQSFNEALIDLKNDRIDALLIDRVYANYYLQSEGILSDYNVFSAGFESESFAVGVRPA 237 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 D ++ A V + G Q+ + + Sbjct: 238 DKRLLQALN---QAFVQLYKEGKFQEISQKWFGE 268 >gi|210615937|ref|ZP_03290860.1| hypothetical protein CLONEX_03079 [Clostridium nexile DSM 1787] gi|210150030|gb|EEA81039.1| hypothetical protein CLONEX_03079 [Clostridium nexile DSM 1787] Length = 268 Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats. Identities = 48/271 (17%), Positives = 96/271 (35%), Gaps = 18/271 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKR-------GFLKCGINTGLVGFAEVKAN 53 M K ++++ + L T+ D K+R G + V + Sbjct: 1 MKKK--IALIMALALSVTTVFAGCGAKDDQKQRESGSGTQKTFTVGFDQDFPPMGFVGDD 58 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G++ GFD+D + ++ + K P++ + + L S ID + T Sbjct: 59 GEYTGFDLDLAKEVADRL---DMKFVPKPISWDAKDMELSSGGIDCIWNGFTMT---GRE 112 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + + Q F++ K GI + + L+G + VQ ++ + L K Sbjct: 113 DKYTWSEPYLNNEQVFVVKKDSGIKTQADLAGKVVDVQTDSSAQKALEQQEKLQKSFKEL 172 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + + DA D + A R ++ V+L D ++ A ++G Sbjct: 173 KIVADYNTAFMDLESGAVDAIAMD--IVVAKYQIEQRKADFVLLDDALASEEYAVGFLKG 230 Query: 234 DTEWYNIVSWTHYAMVTAEEL-GITQKNINQ 263 + E + V T M + I++K + Sbjct: 231 NDELRDKVQKTLEEMAEDGTIKKISEKWFQE 261 >gi|329666779|gb|AEB92727.1| ABC transporter solute-binding component [Lactobacillus johnsonii DPC 6026] Length = 262 Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats. Identities = 53/267 (19%), Positives = 93/267 (34%), Gaps = 10/267 (3%) Query: 1 MYK--DFF-VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K F + I+ L + + IK RG L G++ V + +G Sbjct: 1 MKKIIRFLGLLIIVLTSVGLAGCQRQENSWQAIKSRGTLVIGVDDSFVPMDFRQKDGKLV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD +A+ I P + ++ + L++ ID++ T RE + Sbjct: 61 GFDVDLAKAVCKEIGLKPD---FQTIDWSMKETELRNGTIDVIWNGYTKTKAREKKVAF- 116 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV-F 176 + Q + K +GI++ Q+ G + VQ G++ L +Y K + V + Sbjct: 117 -SKPYLENDQILVTRKNEGINNYRQMRGKILGVQTGSSGTDDLDNYPKVLKKRVKSTVLY 175 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + +A R D D + E + I + D Sbjct: 176 DTYNNAFIDLKAGRIDGLLIDGVYANYYLAHSKYQKEFKKEKLPYPSEKFSVGINKKDKT 235 Query: 237 WYNIVSWTHYAMVTAEEL-GITQKNIN 262 N ++ + EL I +K N Sbjct: 236 LKNKINQALDHLEKTGELKKIRKKWFN 262 >gi|282862287|ref|ZP_06271349.1| extracellular solute-binding protein family 3 [Streptomyces sp. ACTE] gi|282562626|gb|EFB68166.1| extracellular solute-binding protein family 3 [Streptomyces sp. ACTE] Length = 307 Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats. Identities = 41/268 (15%), Positives = 90/268 (33%), Gaps = 18/268 (6%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDD 74 T ++ K+RG L G A + GFD++ + +++ + Sbjct: 51 VATGVDLDSPAFKKAKERGKLIIGAKADQPYLGFEDQATKERSGFDIEIAKMIAADLGFS 110 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 +I++ +++ R A+ Q+D L R+ +G A Y G ++ K Sbjct: 111 DKQIEWKTVDSGIRETAIAKGQVDYLVGTYTINDERKKQVGFA--GPYYKAGADLLVRKD 168 Query: 135 -KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 I+ + G +C G+T + K + + + + DA Sbjct: 169 ESSITGKDAVKGKKVCSIVGSTPLQEI----KKPEYGASVVELAKYSDCVQQLLTKQVDA 224 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 T D S L N + ++ ++ P + + D + ++ + + Sbjct: 225 VTTDDSILKGYAAANS--GKLKVVGQPFTEEPYGVGLNKDDKALRDAINTSLE---NHTK 279 Query: 254 LGITQKNINQVSKDT-----TNPDVQRF 276 G +K + P ++R+ Sbjct: 280 DGTYKKIYEATLGLSGSAYTEPPAIERY 307 >gi|121610274|ref|YP_998081.1| extracellular solute-binding protein [Verminephrobacter eiseniae EF01-2] gi|121554914|gb|ABM59063.1| extracellular solute-binding protein, family 3 [Verminephrobacter eiseniae EF01-2] Length = 275 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 52/290 (17%), Positives = 106/290 (36%), Gaps = 26/290 (8%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 +F + LC +L + + +A + +IKK+G + G+ + V + G+D D Sbjct: 12 NFATAALCGALLSSHALNASAQSVEEIKKKGTVTIGVLVDFPPYGTVDNSNQPDGYDADV 71 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 + L+ ++ +P+ R L + ++D+L + T R + + Sbjct: 72 AKLLAKDWG---VRLNLVPVTGPNRIPFLLTNKVDLLIASFAPTPERAKQVQFSRPHSA- 127 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 HKK I + + L G I V +T + L F+ Sbjct: 128 -ATIVLYGHKKLSIKTPADLKGVRIAVARASTQDTALTAVAPE---GAEIRRFDDDASAM 183 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 A + + DA + A ++ E+ ++ + +APA+ G E V+ Sbjct: 184 QALLSGQVDALGCATTI--AQRIDQRTNGEYE-NKLVLRQQYMAPAMRLGRPELLKGVN- 239 Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTK 293 + + G +N++ K ++L +D S +L L+ Sbjct: 240 -TFVGKYVDNGG-----LNKLYK--------KWLQVDLPSMPATSLPLSN 275 >gi|15596457|ref|NP_249951.1| amino acid ABC transporter periplasmic binding protein [Pseudomonas aeruginosa PAO1] gi|218892766|ref|YP_002441635.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa LESB58] gi|254234386|ref|ZP_04927709.1| hypothetical protein PACG_00230 [Pseudomonas aeruginosa C3719] gi|296390361|ref|ZP_06879836.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa PAb1] gi|9947192|gb|AAG04649.1|AE004555_9 amino acid ABC transporter periplasmic binding protein [Pseudomonas aeruginosa PAO1] gi|126166317|gb|EAZ51828.1| hypothetical protein PACG_00230 [Pseudomonas aeruginosa C3719] gi|218772994|emb|CAW28806.1| probable binding protein component of ABC transporter [Pseudomonas aeruginosa LESB58] Length = 273 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 51/259 (19%), Positives = 91/259 (35%), Gaps = 7/259 (2%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 + A L DI + G L+C + A + GFDVD+C L+ A+ K Sbjct: 20 AGLAQADKLDDIIESGKLRCAVTLDFPPMGSRDAQNNPVGFDVDYCNDLAKAL---DVKA 76 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + + +R AL S + D++ +T TL R ++G++ + + + GI+ Sbjct: 77 EIVETPFPDRIPALVSGRADVIVASTSDTLERAKTIGMSIPYFAFVKV--VLTREDTGIA 134 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFERVEEIDAAYRAHRCDAYTGD 197 S L G + AGT L L KA K ++ + A DA Sbjct: 135 SYEDLKGRPVGGTAGTFEALALEKDSKAWGDAKGSFRAYQSEADTALAISQGHIDATVVS 194 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-I 256 + + + + +A + + N ++ V + Sbjct: 195 STVAASWIKSGKYKGLKIAGDAPYDIDYVALGAKRNEYGLLNYLNLFINQQVRTGRYAEL 254 Query: 257 TQKNINQVSKDTTNPDVQR 275 QK + + + T V R Sbjct: 255 AQKWVGGTAPELTTSAVYR 273 >gi|77456472|ref|YP_345977.1| cystine transporter subunit [Pseudomonas fluorescens Pf0-1] gi|77380475|gb|ABA71988.1| Diaminopimelate-binding protein / L-cystine-binding protein [Pseudomonas fluorescens Pf0-1] Length = 266 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 52/245 (21%), Positives = 89/245 (36%), Gaps = 16/245 (6%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + L IK +G + G+ F+ V A+G GF+V+ AL+ + K + Sbjct: 27 AVAGEQLQQIKDKGVINVGLEGTYPPFSFVDADGKLSGFEVELSEALAKKLG---VKAKI 83 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK----G 136 P AL+SK++D++ + R+ + G ++ K K Sbjct: 84 QPTKWDGILAALESKRLDVVVNQVTISEERKKKYDFSE--PYTVSGIQALVLKDKAAALN 141 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 I S + LSG + V GT E + +A+ ++ A R DA Sbjct: 142 IKSAADLSGKKVGVGLGTNYEQ----WVRANVPGADVRTYDDDPTKFADLNNGRTDAILI 197 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 D L AL+ P + V + S+ A+ +G+ E V+ + L Sbjct: 198 DR--LAALEYAQKAP-KTVAAGEAFSRQEAGIALRKGEPELLAAVNKALDELRADGTLEK 254 Query: 257 TQKNI 261 K Sbjct: 255 LSKKY 259 >gi|16119461|ref|NP_396167.1| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|15161999|gb|AAK90608.1| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 259 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 48/218 (22%), Positives = 89/218 (40%), Gaps = 11/218 (5%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 L D+ G L+ G+ + A G G DV+ R ++ + ++++ +PL Sbjct: 24 DTLADVTSNGKLRVGVLLDAAPWGYKDAEGKDTGLDVELARIMAKDL---NAELEIVPLT 80 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 R +L + ++D+L T R + + G + I VS L+ Sbjct: 81 GASRIPSLLADKVDVLIAAAGATPERAQQVMFSQ--PYAAVSLGVFGGDGEKIDDVSGLA 138 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G I V G+T + L D + FE AA+ A + D + + + A+ Sbjct: 139 GKQIAVAKGSTLDTWLTDNAPE----VKLVRFEDTPSAIAAFLAGQADYFAENSAI--AV 192 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 K+ +D P ++V + I SP + QG+ + N ++ Sbjct: 193 KVADDNPGKNVAIVYRIRLSPAHVGVKQGEQNFLNWIN 230 >gi|158314289|ref|YP_001506797.1| extracellular solute-binding protein [Frankia sp. EAN1pec] gi|158109694|gb|ABW11891.1| extracellular solute-binding protein family 3 [Frankia sp. EAN1pec] Length = 385 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 42/225 (18%), Positives = 87/225 (38%), Gaps = 17/225 (7%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 S + I++ G+L+ G+ T F + + +GFD ++ AI DP +Q+ Sbjct: 92 ARGSRIEAIRRYGYLRVGVTTVAPPFGSMNWRTMEVEGFDPAIAGEIAGAILGDPELVQF 151 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 ++ ++R + +DI++ T R+ + + Y ++ G+ +V Sbjct: 152 RAVDTRDREALVADGTVDIVTGTMTMTCARKERVRF--SGVYYEAAMRILVPAGAGLRTV 209 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L+G +C G+T+ +A+ + V+ AA + DA D + Sbjct: 210 GDLAGRPVCSSQGSTSFEKVANLVRGPGRPVAVNRVGIVD-CLAALQRGEVDAVATDDTI 268 Query: 201 LYALKLTNDRPSEHVILPDIIS-----------KSPLAPAIIQGD 234 L ++ + + V+ P+ P AI + D Sbjct: 269 LAGMRA--EDATVTVLGPEAFDGVLGPAGRAGLDEPYGVAIGRTD 311 >gi|67921185|ref|ZP_00514704.1| extracellular solute-binding protein, family 3 [Crocosphaera watsonii WH 8501] gi|67857302|gb|EAM52542.1| extracellular solute-binding protein, family 3 [Crocosphaera watsonii WH 8501] Length = 232 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 49/226 (21%), Positives = 89/226 (39%), Gaps = 13/226 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K +L L ++ S IL I++ G ++ G F V G+W G+ + Sbjct: 1 MKKILGMMLSLALVAVPLKSVAEPILQRIERTGTIRAGAWKDAKPFGYVNEKGEWVGYSI 60 Query: 62 DFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 D R + S + D P K++ + ++ + ++ +++DI T +T RE + + Sbjct: 61 DIMRVIQSQVETALDKPIKLELVEVDTQNFLDHVRDRKVDISCGPTSFTWNRERYIDFSI 120 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + G ++ K I SV +L I ++A TT E L IV Sbjct: 121 S--YFVTGTQVLVKKGVTIDSVEELKTKRIGLEANTTNEAVLKTLAP----DLQVIVVNS 174 Query: 179 VEEIDAAYRAHRCDAYTGDISALYAL----KLTNDRPSEHVILPDI 220 + A + D Y GD L AL + + ++++L Sbjct: 175 RSDGFAKLQQGVIDGYAGDGILLEALKPRFRTSKCSIKKYIVLKSP 220 >gi|260776933|ref|ZP_05885827.1| polar amino acid uptake family ABC transporter substrate-binding protein [Vibrio coralliilyticus ATCC BAA-450] gi|260606599|gb|EEX32873.1| polar amino acid uptake family ABC transporter substrate-binding protein [Vibrio coralliilyticus ATCC BAA-450] Length = 518 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 46/239 (19%), Positives = 95/239 (39%), Gaps = 14/239 (5%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 F ++L L S +L IK+ G + G+ + + +N GF+ D + Sbjct: 4 FFTLLISCCLLLPSVQAQ-DLLSKIKQSGRIVIGVKADYPPWGMLDSNNQPAGFEPDLAQ 62 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 + A+ +++++ + + RF L Q+D+L ++ R + + P + Sbjct: 63 MIGHAL---NAEVEFKTVTSANRFQKLNEGQVDMLIATVGDSMQRRQRVRM-ITPHYFRS 118 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 G + HK + + L G +C+ AG +L N + PI+ + A Sbjct: 119 GVTALTHKSNSVEKWTDLIGKPVCLTAGAYFNKSLVQ-----NYRIKPIILMSNRDSKLA 173 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQGDTEWYNIVSW 243 ++C A+ D L+ L + V D+ + P+ + + DT ++ +W Sbjct: 174 LLTNKCQAWAYDSGILFHLSNQKEWSDYSV---DVETIMPIHWSMVTRKDTASQSLANW 229 >gi|218689913|ref|YP_002398125.1| cystine transporter subunit [Escherichia coli ED1a] gi|218695527|ref|YP_002403194.1| cystine transporter subunit [Escherichia coli 55989] gi|260855900|ref|YP_003229791.1| putative periplasmic binding transport protein FliY [Escherichia coli O26:H11 str. 11368] gi|300822308|ref|ZP_07102449.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 119-7] gi|331683472|ref|ZP_08384073.1| cystine ABC transporter, cystine-binding periplasmic protein [Escherichia coli H299] gi|218352259|emb|CAU98015.1| cystine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli 55989] gi|218427477|emb|CAR08373.2| cystine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli ED1a] gi|257754549|dbj|BAI26051.1| putative periplasmic binding transport protein FliY [Escherichia coli O26:H11 str. 11368] gi|300525191|gb|EFK46260.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 119-7] gi|309702215|emb|CBJ01531.1| cystine ABC transporter, substrate-binding protein (sulfate starvation-induced protein 7) [Escherichia coli ETEC H10407] gi|323152747|gb|EFZ39019.1| cystine-binding periplasmic protein [Escherichia coli EPECa14] gi|323937195|gb|EGB33475.1| bacterial extracellular solute-binding protein 3 [Escherichia coli E1520] gi|331079687|gb|EGI50884.1| cystine ABC transporter, cystine-binding periplasmic protein [Escherichia coli H299] Length = 266 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 49/272 (18%), Positives = 95/272 (34%), Gaps = 17/272 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + +S++ + ++ S + A +L +K+RG L G+ F+ +G GF+ Sbjct: 8 RQALMSVMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFE 67 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F + L+ + + S P +L SK+ID++ + R+ Sbjct: 68 VEFAQQLAKHLGVEAS---LKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDF--ST 122 Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G ++ K I + + L G + V GT ++ + + ++ Sbjct: 123 PYTISGIQALVKKGNEGTIKTAADLKGKKVGVGLGT----NYEEWLRQNVQGVDVRTYDD 178 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R R DA D L AL L + + S+ A+ +G+ + Sbjct: 179 DPTKYQDLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLL 236 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 V+ M L + D T Sbjct: 237 KAVNDAIAEMQKDGTLQALSE--KWFGADVTK 266 >gi|72161213|ref|YP_288870.1| extracellular solute-binding protein [Thermobifida fusca YX] gi|71914945|gb|AAZ54847.1| extracellular solute-binding protein, family 3 [Thermobifida fusca YX] Length = 285 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 41/237 (17%), Positives = 78/237 (32%), Gaps = 11/237 (4%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 + G+ G ++ N GFDVD ++ + P +I++ + R LQ Sbjct: 42 TITIGVKYDQPGLGLLEGN-KPVGFDVDVATYIAGELGYSPDQIEWTEAASANRETFLQQ 100 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAG 153 +D++ T R+ + A Y Q I+ I L G +C +G Sbjct: 101 GTVDMIVATYSITDERKNVVDFA--GPYYIAQQDIIVSADNTDIQGPEDLEGKVLCSASG 158 Query: 154 TTTELTLADYFKAHNMKY--HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 + + + D + + E DA T D + L P Sbjct: 159 SRSANNIVDSEENGGLGIGAELREAGNYSECMELLANGTVDAVTTDNTILAGFAAQ--NP 216 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 + ++ + + + +G TE V+ A+ E G + + +T Sbjct: 217 DAYRMVNNPFGEEKYGVGLPKGSTEMCEKVN---EAITKMWEEGKALEFLEAAFGET 270 >gi|300928951|ref|ZP_07144455.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 187-1] gi|300463105|gb|EFK26598.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 187-1] Length = 266 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 47/272 (17%), Positives = 94/272 (34%), Gaps = 17/272 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + ++ + ++ S + A +L +K+RG L G+ F+ +G GF+ Sbjct: 8 RQALMGVMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFE 67 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F + L+ + + + P +L SK+ID++ + R+ Sbjct: 68 VEFAQQLAKHLGVE---VSLKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDF--ST 122 Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G ++ K I + + L G + V GT ++ + + ++ Sbjct: 123 PYTISGIQALVKKGNEGTIKTAADLKGKKVGVGLGT----NYEEWLRQNVQGVDVRTYDD 178 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R R DA D L AL L + + S+ A+ +G+ + Sbjct: 179 DPTKYQDLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLL 236 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 V+ M L + D T Sbjct: 237 KAVNDAIAEMQKDGTLQALSE--KWFGADVTK 266 >gi|332040838|gb|EGI77210.1| extracellular solute-binding protein family 3 [Hylemonella gracilis ATCC 19624] Length = 267 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 44/270 (16%), Positives = 86/270 (31%), Gaps = 17/270 (6%) Query: 1 MYKDFFV----SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M + F+ + + + L + + +K + T + V + Sbjct: 1 MNRRPFLHAMLGAAATTLALLCTPAQAQDALSQVMQTKKIKIAVPTDYPPYGFVGLDLQP 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +G D++ + +++ + ++ +P+ + R LQ+ Q+ ++ R + Sbjct: 61 QGLDIEVAKLIANKLGVS---VELVPVTSANRIPYLQTGQVQLVISTLGKNPDRMKVIDF 117 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 +F Q K I S + L G +I V G E L A + Sbjct: 118 THAYSPFF--QAVYAPKSLAIKSFADLGGKTIAVAKGAMEEQELVKSGPA---SMVFKRY 172 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E AA+ A + +S A + P +I SP + +G Sbjct: 173 EDQAASTAAFVAGQTQVIATSVSN--AGLMMQKNPQLGAEFKLLIKDSPNFIGVAKGQDA 230 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSK 266 V+ A A + G K Q Sbjct: 231 LRAKVNDILLA---ARKDGTLDKLAQQWLG 257 >gi|302538271|ref|ZP_07290613.1| glutamate binding periplasmic protein [Streptomyces sp. C] gi|302447166|gb|EFL18982.1| glutamate binding periplasmic protein [Streptomyces sp. C] Length = 270 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 46/276 (16%), Positives = 95/276 (34%), Gaps = 13/276 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M ++ +I L T+ + + GI G + +G + GFD Sbjct: 1 MKVPKAGAVATVIALAATASGCGGEAPKE-----PISIGIKFDQPGIGMREPDGTFTGFD 55 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD ++ + ++I++ + + +R L +Q ++ ++ + R + A Sbjct: 56 VDVATYIAKELGYKANEIEFKQVYSSDRELLIQYNEVKFVAASYTINDKRREKVEFA--G 113 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Q ++ I+ L+ +C +G+T+ + K + Sbjct: 114 PYFVAHQDLMIRADDNSITKAEDLNNKRLCTVSGSTSAENIRKNLA---PKASVLELGGY 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A R + DA T D S L + + +L +S + +GD + Sbjct: 171 SECLVAIRDNTADAMTTDNSILAGYAARKENAGKFKLLGLNMSNENYGIGLKKGDNDLQR 230 Query: 240 IVSWTHYAMVTAEE-LGITQKNINQV-SKDTTNPDV 273 ++ MV+ +KN K P V Sbjct: 231 KINTAITKMVSDGSWEAAVKKNFGPANYKYEPAPQV 266 >gi|190895140|ref|YP_001985433.1| putative amino acid ABC transporter substrate-binding protein [Rhizobium etli CIAT 652] gi|190700801|gb|ACE94883.1| probable amino acid ABC transporter, substrate-binding protein [Rhizobium etli CIAT 652] Length = 282 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 43/240 (17%), Positives = 87/240 (36%), Gaps = 15/240 (6%) Query: 2 YKDFFVSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 + F + + FT S A+ L +IKK+G + GI T F+ + A+G + Sbjct: 10 RRTFLAFSSLALAIAFTGASHIRQAGAATLDEIKKKGTITFGIVTDQPPFSFINASGQNE 69 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G+D+D + ++ + + + Y+P+ + R L + ++D+L R + Sbjct: 70 GYDIDLSKLMAKELGVEAA---YVPITSANRIPQLMTGKVDMLICVMGVYPDRAKVVQY- 125 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 K G++ V +LSG SI V+ G++ + + D F+ Sbjct: 126 -VAPYAEINAAIYGPKDGGVTKVEELSGHSIAVEKGSSMDKAVTDAAPK---DATIQRFD 181 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 A + + + ++ I+ +S A+ E Sbjct: 182 DASSAVQALLSGQVEYLGSYSHQFGGVEKAAPGKYAQKIV---LSTEYEGIAVRPKSEEL 238 >gi|291301451|ref|YP_003512729.1| extracellular solute-binding protein family 3 [Stackebrandtia nassauensis DSM 44728] gi|290570671|gb|ADD43636.1| extracellular solute-binding protein family 3 [Stackebrandtia nassauensis DSM 44728] Length = 323 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 86/230 (37%), Gaps = 10/230 (4%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS--KIQYLPLN 84 L D K G L G+ E K + ++GFD++ + L +F K+++ Sbjct: 73 LADAVKDGKLVVGVKPDQPLIGEKKGS-TYEGFDIEMAKLLGMRLFGKGGEEKVEFKETT 131 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ-GFIMHKKKGISSVSQL 143 + R L S ++D++ + + +F F GQ + + K I ++ L Sbjct: 132 SDNREAFLNSGEVDVVIASYSMYP--DRVKQFSFAGPYLFTGQNALVSAENKDIKTIDDL 189 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 +G +C+ G+ + L K N K + A + DA + D + LY Sbjct: 190 AGKKVCIAKGSGSIDNL----KKENPKAKIETRANYGDCAAQVKDGTFDAVSTDETILYG 245 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 K + + + + P + +G+ + ++ A E+ Sbjct: 246 YKSQDKEAFRILDSSENFTDEPYGIGMKKGNDAAKDYINEMIKAAYENED 295 >gi|331673438|ref|ZP_08374206.1| cystine ABC transporter, cystine-binding periplasmic protein [Escherichia coli TA280] gi|331069636|gb|EGI41023.1| cystine ABC transporter, cystine-binding periplasmic protein [Escherichia coli TA280] Length = 285 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 48/268 (17%), Positives = 96/268 (35%), Gaps = 18/268 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + ++ + ++ S + A +L +K+RG L G+ F+ +G GF+ Sbjct: 27 RQALMGVMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFE 86 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F + L+ + + S P +L SK+ID++ + R+ Sbjct: 87 VEFAQQLAKHLGVEAS---LKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDF--ST 141 Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G ++ K I + + L G + V GT ++ + + ++ Sbjct: 142 PYTISGIQALVKKGNEGTIKTAADLKGKKVGVGLGT----NYEEWLRQNVQGVDVRTYDD 197 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R R DA D L AL L + + S+ A+ +G+ + Sbjct: 198 DPTKYQDLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLL 255 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSK 266 V+ A+ E+ G Q + Sbjct: 256 KAVND---AIAEMEKDGTLQALSEKWFG 280 >gi|301029372|ref|ZP_07192468.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 196-1] gi|299877727|gb|EFI85938.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 196-1] Length = 285 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 49/272 (18%), Positives = 95/272 (34%), Gaps = 17/272 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + +S++ + ++ S + A +L +K+RG L G+ F+ +G GF+ Sbjct: 27 RQALMSVMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFE 86 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F + L+ + + S P +L SK+ID++ + R+ Sbjct: 87 VEFAQQLAKHLGVEAS---LKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDF--ST 141 Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G ++ K I + + L G + V GT ++ + + ++ Sbjct: 142 PYTISGIQALVKKGNEGTIKTAADLKGKKVGVGLGT----NYEEWLRQNVQGVDVRTYDD 197 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R R DA D L AL L + + S+ A+ +G+ + Sbjct: 198 DPTKYQDLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLL 255 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 V+ M L + D T Sbjct: 256 KAVNDAIAEMQKDGTLQALSE--KWFGADVTK 285 >gi|291570910|dbj|BAI93182.1| extracellular solute-binding protein [Arthrospira platensis NIES-39] Length = 282 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 53/268 (19%), Positives = 102/268 (38%), Gaps = 25/268 (9%) Query: 1 MYKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M + +S+L L++ + FT + ++L I + G L+ G+ T V F+ + NGD +G+ Sbjct: 1 MNQKLAISLLSLVLSVGFTGVAGAETVLEQIGRTGVLRAGVRTDAVPFSYLNDNGDIEGY 60 Query: 60 DVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 VD R + + + P +++ + ++RF +Q +D++ T T RE G+ Sbjct: 61 SVDLIRLIHGRLQEKLNQPIRLEMTTVTLQDRFEQVQKGNLDLVCEATSITAERE--NGV 118 Query: 117 AFRPITYFDGQGFIMHK------------KKGISSVSQLSGASICVQAGTTTELTLADYF 164 F + G ++ + IS+VS L +I TTT+ L + Sbjct: 119 DFSTPFFVTGIQMLVKTENRDRLDPTQLSETDISTVS-LERVTIGFLESTTTDSELRPVY 177 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILP-DIIS 222 + P E + D L + R ++P ++ Sbjct: 178 PEAQWEAVP----SRAEGIRRLQEGELQGIVSDGILLLGQLWKDGRTRQNFQLVPSQPLT 233 Query: 223 KSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 + EW +V+ T + Sbjct: 234 FENYGCILPMNSREWSRVVNSTIASPEN 261 >gi|49083417|gb|AAT51027.1| PA1260 [synthetic construct] Length = 274 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 51/259 (19%), Positives = 91/259 (35%), Gaps = 7/259 (2%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 + A L DI + G L+C + A + GFDVD+C L+ A+ K Sbjct: 20 AGLAQADKLDDIIESGKLRCAVTLDFPPMGSRDAQNNPVGFDVDYCNDLAKAL---DVKA 76 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + + +R AL S + D++ +T TL R ++G++ + + + GI+ Sbjct: 77 EIVETPFPDRIPALVSGRADVIVASTSDTLERAKTIGMSIPHFAFVKV--VLTREDTGIA 134 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFERVEEIDAAYRAHRCDAYTGD 197 S L G + AGT L L KA K ++ + A DA Sbjct: 135 SYEDLKGRPVGGTAGTFEALALEKDSKAWGDAKGSFRAYQSEADTALAISQGHIDATVVS 194 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-I 256 + + + + +A + + N ++ V + Sbjct: 195 STVAASWIKSGKYKGLEIAGDAPYDIDYVALGAKRNEYGLLNYLNLFINQQVRTGRYAEL 254 Query: 257 TQKNINQVSKDTTNPDVQR 275 QK + + + T V R Sbjct: 255 AQKWVGGTAPELTTSAVYR 273 >gi|300310886|ref|YP_003774978.1| amino acid ABC transporter periplasmic protein [Herbaspirillum seropedicae SmR1] gi|300073671|gb|ADJ63070.1| ABC-type amino acid transport system, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 265 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 51/255 (20%), Positives = 97/255 (38%), Gaps = 11/255 (4%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 L ++ A L DI+K G +K G+ + V ++ +G D+D R ++ Sbjct: 9 AASLGLMAVAVHPAMADTLADIQKAGVVKIGVPQDFAPYGSVTSDLQLQGLDIDVARLVA 68 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 + K + +P+ R LQ+ +ID++ RE + + Y + Sbjct: 69 KGMG---VKAELVPVPISSRMAFLQTHKIDLIISTLGKNAEREKVIDFSQGYAPYNNSVF 125 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 + ++ + L+ ++ V T +L L D + +E + AAY + Sbjct: 126 GVA--AIKVAGPADLANQTVGVARSTFEDLMLTDSVPKSTV---IKRYEDNNGLIAAYVS 180 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 + YAL P+ +L II+ S + +G+ V+ A Sbjct: 181 GQVQLVGTGDFVAYALA--EKTPANKPLLKYIINVSTCYVGMNKGEPALMAKVNEALTAS 238 Query: 249 VTAEEL-GITQKNIN 262 + EL GI +K +N Sbjct: 239 KKSGELNGIVKKWLN 253 >gi|56750285|ref|YP_170986.1| polar amino acid transport system substrate-binding protein [Synechococcus elongatus PCC 6301] gi|81300085|ref|YP_400293.1| extracellular solute-binding protein [Synechococcus elongatus PCC 7942] gi|56685244|dbj|BAD78466.1| polar amino acid transport system substrate-binding proetin [Synechococcus elongatus PCC 6301] gi|81168966|gb|ABB57306.1| extracellular solute-binding protein, family 3 [Synechococcus elongatus PCC 7942] Length = 260 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 49/235 (20%), Positives = 96/235 (40%), Gaps = 18/235 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTN--ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 + + + L F+ + ++ A+ L IK+RG+L G+ + + A G W+G Sbjct: 10 LRRWLLLGTSVLASFFYGANTSGTIAADLETIKRRGYLIVGVQANVAPLSWQDAQGQWQG 69 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 F+VD R+L++ + + + +++ L +++R AL + ++D+L T R+ + Sbjct: 70 FEVDLARSLAAELLGNSAAVRFEGLQSRDRLPALLADRVDLLIAQMTVTDARQRVAQFSR 129 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y D G + + GI+ + V G++ L + + Sbjct: 130 --PYYRDRIGLLTRR--GITQPQ-----RVAVLQGSSAIPLLRWQAPE----LALVGVKS 176 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 A + D D L + +DR + +LP PLA A+ QG Sbjct: 177 YAAAQTALDRGQVDGIAADRLVLQQWQRQSDR---YQLLPQQWGDFPLAIALPQG 228 >gi|293567503|ref|ZP_06678848.1| amino acid ABC transporter, amino acid-binding protein [Enterococcus faecium E1071] gi|291589746|gb|EFF21549.1| amino acid ABC transporter, amino acid-binding protein [Enterococcus faecium E1071] Length = 271 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 49/277 (17%), Positives = 94/277 (33%), Gaps = 14/277 (5%) Query: 1 MYKDFFVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K F+ L +L F S T+A I + + G++ V NG Sbjct: 1 MKKTSFLFALIAGLLLFAGCSNKKTSADNWATINEEKKIVIGLDDTFVPMGFRDKNGKLT 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D +A+ + + P++ + L + ID++ T RE + Sbjct: 61 GFDIDLAKAVFEQYG---ITVDFQPIDWSMKEFELNNGTIDLIWNGYSKTPAREKKVQF- 116 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPI 174 + Q I K+ GI++ Q++ + Q G++ + K + Sbjct: 117 -TKPYMENDQVLITPKESGITNFGQMNNKRLGAQNGSSGYDVFTKQPEVLKEIVKNQDAV 175 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +++ E ++ R D D + + I A + D Sbjct: 176 LYDSFNEALIDLKSRRVDGLLMDKVYADYYLKQRNELEDFNITKGSYESEDFAVGARKSD 235 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + V + A+ E+ G QK ++ + P Sbjct: 236 STL---VKKINEALDQLEKTGEFQKISDKWFGEDVTP 269 >gi|258651818|ref|YP_003200974.1| family 1 extracellular solute-binding protein [Nakamurella multipartita DSM 44233] gi|258555043|gb|ACV77985.1| extracellular solute-binding protein family 3 [Nakamurella multipartita DSM 44233] Length = 282 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 44/258 (17%), Positives = 93/258 (36%), Gaps = 13/258 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNA------SILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 + ++L L ++ + S+ + S + ++ G L GI+ G Sbjct: 5 RRGLVGAVLALTLVGLAACSSGSGSVGTPSTVSGAQEGGKLTIGISFDQPGLGFKDGE-T 63 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 ++GFDVD +++A+ I ++ + ER L+S +D++ + T R+ + Sbjct: 64 YRGFDVDTATYVAAALGVPSQNITWVQADPSEREKLLESGDVDLVFSSYSITDQRKQVVD 123 Query: 116 LAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 A + Q ++ + I+ L G +C GTT+ + D + Sbjct: 124 FA--GPYFVAHQDLLVRRNETDITGPDTLDGRVLCSVTGTTSSQYIKDNYLGR---ITLT 178 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + R + AA DA + D L + + ++ + + I +GD Sbjct: 179 EYPRFSDCVAALANSEVDAVSTDDVILAGFAAQDQYKGKLKLVGNGFTDERYGVGIPKGD 238 Query: 235 TEWYNIVSWTHYAMVTAE 252 V+ + Sbjct: 239 DARVAQVNQALAQYIADG 256 >gi|269127494|ref|YP_003300864.1| extracellular solute-binding protein family 3 protein [Thermomonospora curvata DSM 43183] gi|268312452|gb|ACY98826.1| extracellular solute-binding protein family 3 [Thermomonospora curvata DSM 43183] Length = 290 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 45/236 (19%), Positives = 80/236 (33%), Gaps = 8/236 (3%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + + S+ K+ G L GI K +G ++GFDVD + ++ + + S I + Sbjct: 31 AESKSVAQRAKETGKLTIGIKFDQPALGLQKPDGTYEGFDVDVAKYIAKELGVEESGITW 90 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISS 139 ++ R L S Q+D++ T R + F Y Q ++ I Sbjct: 91 KEARSENRESFLASNQVDLVVATYSITEGR--KPKVTFAGPYYVAHQDTMVRADNDDIKK 148 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER---VEEIDAAYRAHRCDAYTG 196 + L G +C AG+ + + D + + + DA T Sbjct: 149 AADLKGKKLCKAAGSNSWRRITDPPPDGQLNIKDVELVDATGYSDCVTKLDNGALDAVTT 208 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 D L + ++ D + I +GDTE V+ M Sbjct: 209 DDLILAGFASQQK--GKFKVINDPFTDEKYGVGIKKGDTETCEAVNKAITKMYADG 262 >gi|78061686|ref|YP_371594.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia sp. 383] gi|77969571|gb|ABB10950.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia sp. 383] Length = 266 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 54/272 (19%), Positives = 106/272 (38%), Gaps = 19/272 (6%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 F I ++ T+ S A +L +K+ G LK + F A+G +GFDVD Sbjct: 7 TFKQGIAAALLCIATATSHAADLLDTVKQSGVLKIALEGTYPPFDYRNADGQLEGFDVDV 66 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 +A+++ + P Q++ LQ+ + D++ T R+ +L + + Sbjct: 67 AKAVAARLGVKP---QFVTTEWSGILAGLQAGKFDVIVNQVAITPSRQQALDFSTPYVYS 123 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 + + S+ +L G I V G+ + L A +++ +P E + + Sbjct: 124 SAQLLQRQNDARAFKSLDELKGKKIGVTMGS-NYVDLVKTVPAIDLQVYPGTPENLRD-- 180 Query: 184 AAYRAHRCDAYTGDISALYALKLTND---RPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A R DA D L L + RP + + + +G+ ++ Sbjct: 181 --LAAGRIDAAVNDRLMLSYLIKNSRLPLRPGSVLAGGE----DRMGIPFRKGNPKFAKA 234 Query: 241 VSWTHYAMVTAEELGITQK-NINQVSKDTTNP 271 + A+ + ++ G +K ++ DTT P Sbjct: 235 IDD---AVASLQQDGTMKKISMQWFGADTTKP 263 >gi|146305347|ref|YP_001185812.1| extracellular solute-binding protein [Pseudomonas mendocina ymp] gi|145573548|gb|ABP83080.1| amino acid ABC transporter substrate-binding protein, PAAT family [Pseudomonas mendocina ymp] Length = 261 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 47/239 (19%), Positives = 93/239 (38%), Gaps = 15/239 (6%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 DI G LK + F V + +G D+D + L+ + K++ P+N+ Sbjct: 29 EDISAAGVLKVAVPQDFPPFGSVGPDMKPRGLDIDTAQLLADKL---QVKLELTPVNSTN 85 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 R L + ++D++ + RE + + ++ G + I+S+ L+G + Sbjct: 86 RIPFLTTGKVDLVISSLGKNPEREAVIDFSAPYAPFY--LGVFGPEDAAIASLDDLAGKT 143 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 I V G+ ++ L++ FE AAY + + + + A+ Sbjct: 144 ISVTRGSIEDIELSNVAPK---GATIKRFEDNNSTIAAYLSGQVELIASGNVVMVAIAER 200 Query: 208 NDR--PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH-YAMVTAEELGITQKNINQ 263 N + PS + L D SP+ + + T + V+ A ++QK + Q Sbjct: 201 NPKRIPSMKLKLKD----SPVYVGVNKSQTALLDKVNAIIADAKADGSLEALSQKWLKQ 255 >gi|313623355|gb|EFR93580.1| amino acid ABC transporter, amino acid-binding protein [Listeria innocua FSL J1-023] Length = 271 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 41/273 (15%), Positives = 95/273 (34%), Gaps = 14/273 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILG---DIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K ++++ +++L + S+ S IKK + G++ V + + Sbjct: 1 MKKGLLITVMAIVMLALGACSSGESKEDQWSRIKKDKEVVIGLDDSFVPMGFRDKDDNLV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D +A+ K ++ P++ + L++ ID++ T R+ + Sbjct: 61 GFDIDLAKAVFEEYG---IKAKFTPIDWTMKESELKNGSIDLIWNGYTVTDARKKQVAF- 116 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPI 174 + Q + K I+ S + ++ Q G ++ +A + P Sbjct: 117 -SKPYMKNEQVLVTLKSSNINKFSDMKDKTLGAQNGASSIDDMAKKPEVLTDIIKNNEPE 175 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +++ + R D D ++ I+ + A + + D Sbjct: 176 LYDTFDTAFIDLNNKRIDGLIIDEVYARYYIDKQKNKDDYNIITGGFDPTDFAVGMRKSD 235 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 E + ++ A + G Q+ + D Sbjct: 236 KELQSKIN---EAFEKLYKEGKMQEISKKWFGD 265 >gi|257459776|ref|ZP_05624885.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] gi|257443201|gb|EEV18335.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] Length = 268 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 44/240 (18%), Positives = 94/240 (39%), Gaps = 13/240 (5%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP-SKIQYLPL 83 L I++ G ++ G+ E G ++GF++D A++ IF KI+++PL Sbjct: 17 DSLDQIRQNGVIRIGVRDAHPPLCESNG-GKFEGFEIDLANAIAKEIFGKKEGKIEFIPL 75 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 + +R L++ ++D++ T R+ + + G + K + ++QL Sbjct: 76 SVNDRIPFLEANKLDLVIGLFSITNERKRKIDFSL--PYLSVNLGVLTRKADAFTDIAQL 133 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 I V G + T+A+ F + + +E R D Y D + A Sbjct: 134 HDKKI-VFEG---DATVAERFFKNKGFKNLGHCASAKECYEMIRNGDADGYINDNLIVLA 189 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 + +D V ++ + + + + E + V+ ++ + G +K Q Sbjct: 190 YSVIDDT--LEVPFKNLGPSDFIGIGVQKDNKELLDFVN---AELIKLSKEGFFKKAYEQ 244 >gi|108799122|ref|YP_639319.1| extracellular solute-binding protein [Mycobacterium sp. MCS] gi|119868237|ref|YP_938189.1| extracellular solute-binding protein [Mycobacterium sp. KMS] gi|126434728|ref|YP_001070419.1| extracellular solute-binding protein [Mycobacterium sp. JLS] gi|108769541|gb|ABG08263.1| amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium sp. MCS] gi|119694326|gb|ABL91399.1| amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium sp. KMS] gi|126234528|gb|ABN97928.1| amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium sp. JLS] Length = 275 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 41/240 (17%), Positives = 80/240 (33%), Gaps = 11/240 (4%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 + G G +G GFDVD ++ + P +I++ + +R +Q+ Sbjct: 38 TIVIGTKFDQPGLGLRNPDGSMSGFDVDVATYVAGELGYTPEQIEWKESPSGQRETLIQN 97 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQL-SGASICVQA 152 Q+D + T R+ + A GQ ++ I+ + L + +C + Sbjct: 98 DQVDYIVATYSITDSRKEKVDFA--GPYLITGQSLLVRNDNTDITGAASLANNKRLCSVS 155 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 G+T + D + ++ A + DA T D L P Sbjct: 156 GSTPAQKIKDEYP----GVQLQQYDTYSACIEALKNGAIDAVTTDEVILAGYAAQ--TPG 209 Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQKNINQVSKDTTNP 271 I+ D S+ + + D+E ++ M ++ KN+ P Sbjct: 210 AFKIVGDTFSEERYGVGLKKDDSELRAKINAAIEKMESSGAWKEAFDKNLGPAGITAPTP 269 >gi|153869942|ref|ZP_01999446.1| Lysine-arginine-ornithine-binding periplasmic protein [Beggiatoa sp. PS] gi|152073593|gb|EDN70555.1| Lysine-arginine-ornithine-binding periplasmic protein [Beggiatoa sp. PS] Length = 110 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 49/110 (44%), Positives = 73/110 (66%), Gaps = 3/110 (2%) Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLT 292 GD +W I+ + ++ AEELGITQ N++ + + NP V+R LG++ S E +GL Sbjct: 4 GDEQWVKIIRTILFGLINAEELGITQANVDTMM-SSDNPQVRRLLGVEGSFGQAE-IGLE 61 Query: 293 KDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 D R +R +GNYGE+++RNLG+ + +PRG N LW+ GGL+YAPP+R Sbjct: 62 PDAIARAVRAVGNYGEIYERNLGSG-GIGMPRGLNRLWTDGGLIYAPPLR 110 >gi|323977899|gb|EGB72985.1| extracellular solute-binding protein 3 [Escherichia coli TW10509] Length = 266 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 48/272 (17%), Positives = 93/272 (34%), Gaps = 17/272 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + ++ + ++ S + A +L +K+RG L G+ F+ +G GF+ Sbjct: 8 RQALMGVMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFE 67 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F + L+ + + S P +L SK+ID++ + R+ Sbjct: 68 VEFAQQLAKHLGVEAS---LKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDF--ST 122 Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G ++ K I + L G + V GT ++ + + ++ Sbjct: 123 PYTISGIQALVKKGNEGSIKTADDLKGKKVGVGLGT----NYEEWLRQNVQGVDVRTYDD 178 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R R DA D L AL L + + S+ A+ +G+ + Sbjct: 179 DPTKYQDLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLL 236 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 V+ M L + D T Sbjct: 237 KAVNDAIAEMQKDGTLQALSE--KWFGADVTK 266 >gi|291617814|ref|YP_003520556.1| FliY [Pantoea ananatis LMG 20103] gi|291152844|gb|ADD77428.1| FliY [Pantoea ananatis LMG 20103] gi|327394231|dbj|BAK11653.1| cystine-binding periplasmic protein precursor FliY [Pantoea ananatis AJ13355] Length = 288 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 52/265 (19%), Positives = 89/265 (33%), Gaps = 13/265 (4%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 + + L+ F +L +K +G L+ G+ F+ G GF+V+F + Sbjct: 36 MMAVALVAGFSVKTFAADDLLAQVKSKGELRVGLEGTYPPFSFQDEKGKLTGFEVEFAQD 95 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + P AL SK+ID++ + R+ + P T Sbjct: 96 LAKHMGVKAV---LKPTKWDGMLAALDSKRIDVVINQVTISDERKKKYDFS-TPYTISGV 151 Query: 127 QGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 Q + K G I+ L+G + V GT E L +A+ ++ Sbjct: 152 QALTLKKNAGSITKPEDLAGKKVGVGLGTNYEQWL----RANVKGVDIRTYDDDPTKYQD 207 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 R+ R DA D L AL L + S+ A+ +G+ + + Sbjct: 208 LRSGRVDAILVDR--LAALDLVKKTGDTMAVAGPAFSRLEAGVALRKGNEDLLKAIDQAI 265 Query: 246 YAMVTAEELGITQKNINQVSKDTTN 270 M L + D T Sbjct: 266 AEMQKDGTLKKLSE--KWFGADVTK 288 >gi|86357103|ref|YP_468995.1| amino acid ABC transporter substrate-binding protein [Rhizobium etli CFN 42] gi|86281205|gb|ABC90268.1| probable amino acid ABC transporter, substrate-binding protein [Rhizobium etli CFN 42] Length = 264 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 52/254 (20%), Positives = 96/254 (37%), Gaps = 15/254 (5%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK-GFDVDFCRALS 68 + + +L T +A L IK RG L G+ F + + G+++D +AL+ Sbjct: 1 MSISLLAATQAFADA-TLDRIKARGALTVGVILSGAPFGYIDPTSQTQKGYNLDIAKALA 59 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 + K++ + + R LQ ++DIL N +T + + L + P Y G Sbjct: 60 DDLG---VKLETVTVTPPNRVQFLQQGKVDILIANMQYTE--DRAKVLDWVPTPYDRSGG 114 Query: 129 FIM-HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 + K G+ + L G +CV G+ L + + A E A + Sbjct: 115 AAVGRKDSGLKDWADLKGKPVCVSQGSNYTQPLIEKYGA-----EVKGLPSQPESLLALQ 169 Query: 188 AHRCDAYTGDISAL-YALKLTNDRPSEHVIL-PDIISKSPLAPAIIQGDTEWYNIVSWTH 245 C + L L+ + ++ IL P + S + +G+ E + T Sbjct: 170 GGNCVVAVHVGATLGLLLRDRPEDWEDYAILFPTELIPSDSVIWVRKGEKETAEALDKTI 229 Query: 246 YAMVTAEELGITQK 259 + T+ +L K Sbjct: 230 RQLHTSGKLLEFAK 243 >gi|222082284|ref|YP_002541649.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221726963|gb|ACM30052.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 290 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 44/247 (17%), Positives = 101/247 (40%), Gaps = 16/247 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 + + F + L I+ S +A S+L + G L+ + L ++ V A+G Sbjct: 24 LKRAFLGLLGGLAIVASVSMPASAESGSVLQSVLSNGKLRIAVLGSLPPYSTVGADGVPV 83 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G+D+D + L++A+ +P +++ + R +LQ+ ++D+ + + R S+ Sbjct: 84 GYDIDIAKKLAAALKVEP---EFVVTDIPSRVTSLQTGKVDVTIADFTRNVERSTSVAF- 139 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASI--CVQAGTTTELTLADYFKAHNMKYHPIV 175 ++ + ++ + + A I + G T E + AH + Sbjct: 140 -SNPYVVTNMRLLVPESAPYKTIDEANAAKIRVAISRGGTAERAV----PAHLPNAQIVR 194 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F + +A + + DA D Y K D + + ++++ +A + GD Sbjct: 195 FNTQADELSALLSGQVDAMAEDD--FYNRKAIGDNQGKLRQVDGSLARAEIAIGVPAGDA 252 Query: 236 EWYNIVS 242 +W +++ Sbjct: 253 DWLRVIN 259 >gi|167570067|ref|ZP_02362941.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia oklahomensis C6786] Length = 264 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 59/277 (21%), Positives = 102/277 (36%), Gaps = 26/277 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + K ++ + T+ + A +L ++K+RG L+ G+ F G+ GFD Sbjct: 6 LKKLLVTGLIGASFVAATAHA--ADLLDEVKQRGTLRIGLEGTFPPFNSKNPQGELVGFD 63 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A+++ + P +++ LQ+ + D++ T R +L P Sbjct: 64 VDIAKAIAAKLGVKP---EFVTTEWSGIIAGLQAGKFDVIVNQVGITDKRRETLDF--SP 118 Query: 121 ITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 F I K S+ L G + V G T + +A ++K +P Sbjct: 119 AYTFSSAQLIQRKDDTRQFKSLEDLKGKKLGVALG-TNYMDMAKSVPGIDVKTYPGA--- 174 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTND---RPSEHVILPDIISKSPLAPAIIQGDT 235 E A R DA D L L + RP +V S +P +G+ Sbjct: 175 -PEYLRDLAAGRLDAALNDRLMLAYLTKNSQLPLRPGSNVG-----SANPSGIPFKKGNP 228 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSK-DTTNP 271 ++ + AM E G K ++ D T P Sbjct: 229 KFAKAI---AEAMTQLEADGTFTKISDKWFGIDVTKP 262 >gi|167562880|ref|ZP_02355796.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia oklahomensis EO147] Length = 264 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 59/277 (21%), Positives = 103/277 (37%), Gaps = 26/277 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + K ++ + T+ + A +L ++K+RG L+ G+ F G+ GFD Sbjct: 6 LKKLLVTGLIGASFVAATAHA--ADLLDEVKQRGTLRIGLEGTFPPFNSKNPQGELVGFD 63 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A+++ + P +++ LQ+ + D++ T R +L P Sbjct: 64 VDIAKAIAAKLGVKP---EFVTTEWSGIIAGLQAGKFDVIVNQVGITDKRRETLDF--SP 118 Query: 121 ITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 F I K S+ L G + V G T + +A ++K +P Sbjct: 119 AYTFSSAQLIQRKDDTRQFKSLEDLKGKKLGVALG-TNYMDMAKSVPGIDVKTYPGA--- 174 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTND---RPSEHVILPDIISKSPLAPAIIQGDT 235 E A R DA D L L + RP +V S +P +G+ Sbjct: 175 -PEYLRDLAAGRLDAALNDRLMLAYLTKNSQLPLRPGSNVG-----SANPSGIPFKKGNP 228 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSK-DTTNP 271 ++ ++ AM E G K ++ D T P Sbjct: 229 KFAKAIAD---AMTQLEADGTFTKISDKWFGIDVTKP 262 >gi|323526240|ref|YP_004228393.1| family 3 extracellular solute-binding protein [Burkholderia sp. CCGE1001] gi|323383242|gb|ADX55333.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1001] Length = 264 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 58/273 (21%), Positives = 104/273 (38%), Gaps = 21/273 (7%) Query: 3 KDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K FV+ LI FT+ + +A +L +K+RG L+ G+ F +G+ G+DV Sbjct: 7 KKLFVA--ALIGASFTAVTAHADDLLDQVKQRGTLRVGLEGTFPPFNSKAPSGELVGYDV 64 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D +A+++ + P +++ LQ+ + D++ T R+ +L P Sbjct: 65 DIAKAVAAKLGVKP---EFVTTEWSGIIAGLQAGKFDVIVNQVGITDARKQALDF--SPA 119 Query: 122 TYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + I K S+ L G + V G T + +A ++K +P Sbjct: 120 YTYSAAQLIQRKDDTRQFKSLEDLKGKKLGVGLG-TNYMDMAKSVPGIDVKTYPGA---- 174 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A R DA D L L + P ++ S +P + + ++ Sbjct: 175 PEYLRDLAAGRLDAALNDRLMLAYLLKNSQLP--LRTGANVGSGNPSGIPFRKNNPKFAK 232 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSK-DTTNP 271 + AM E G K ++ D + P Sbjct: 233 AIDD---AMTQLEADGTFAKISDKWFGIDVSKP 262 >gi|118443622|ref|YP_878647.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Clostridium novyi NT] gi|118134078|gb|ABK61122.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Clostridium novyi NT] Length = 270 Score = 146 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 57/284 (20%), Positives = 98/284 (34%), Gaps = 29/284 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGD------------IKKRGFLKCGINTGLVGFA 48 M K +SIL +II+ S + S +K G L G++ G Sbjct: 1 MKK--IMSILLVIIMGIVSLTGCGSKGASTTNSSSDSSLASVKNSGKLLVGLDDGYPPME 58 Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + GFD+D + + + K++++ L LQSK+ D + T Sbjct: 59 FRDEKNNLVGFDIDLAKEIGKKLG---VKVEFITTEFSGILLGLQSKKFDTIIAGFTMTD 115 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAH 167 R+ SL GQ + K I +S L I Q G+ ++T K Sbjct: 116 ERKKSLNFTE--PYVLGGQIIAVKKGNNSIKKLSDLKEKVIGCQMGSAGQITAESKLKDI 173 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 + ++ E + R DA D + +P + +L +++SK P+ Sbjct: 174 K---ELRKYGKITEAFSDMSIGRIDAVIMDAQV--GGYYISKKPGQFEVLDEMVSKEPMG 228 Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELGITQK-NINQVSKDTTN 270 A GD + V ++ G K ++ D Sbjct: 229 IAFRMGDNALKDEVQKIIN---ELKKDGTLSKLSVKWFGFDAYK 269 >gi|145224550|ref|YP_001135228.1| extracellular solute-binding protein [Mycobacterium gilvum PYR-GCK] gi|315444881|ref|YP_004077760.1| amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium sp. Spyr1] gi|145217036|gb|ABP46440.1| amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium gilvum PYR-GCK] gi|315263184|gb|ADT99925.1| amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium sp. Spyr1] Length = 279 Score = 146 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 40/240 (16%), Positives = 79/240 (32%), Gaps = 11/240 (4%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 + G G + +G GFDVD ++ + P KI++ + +R +Q+ Sbjct: 43 TIVIGTKFDQPGLGQKNPDGTMSGFDVDVATYVAGELGYAPDKIEWKESPSAQRETLIQN 102 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQL-SGASICVQA 152 Q+ ++ T R+ + A GQ ++ I+ + L + +C + Sbjct: 103 GQVTFIAATYSITDSRKEKVAFA--GPYLITGQSLLVRNDNNDITGAASLENNKILCSVS 160 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 G+T + D ++ A + DA T D L + P Sbjct: 161 GSTPAQKIKD----EYQGVQLQQYDTYSACIDALKNGAVDAVTTDEVILAGYAAQS--PG 214 Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQKNINQVSKDTTNP 271 I+ + S+ + + D E ++ M + KN+ P Sbjct: 215 TFKIVGEPFSEERYGIGLKKDDAELRTKINDALKKMEDSGAWKEAFDKNLGPAGITAPAP 274 >gi|260461851|ref|ZP_05810097.1| extracellular solute-binding protein family 3 [Mesorhizobium opportunistum WSM2075] gi|319785376|ref|YP_004144852.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|259032492|gb|EEW33757.1| extracellular solute-binding protein family 3 [Mesorhizobium opportunistum WSM2075] gi|317171264|gb|ADV14802.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 284 Score = 146 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 49/269 (18%), Positives = 95/269 (35%), Gaps = 19/269 (7%) Query: 2 YKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 + ++ + A S L I KRG L G + A G + Sbjct: 3 RRSMLSAMGATAAASLVAKGAKAEEVTSTLDAIMKRGHLLAGARYDYPPGSFADAQGVVQ 62 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G+ D R + + ++++ ++ R L + QID T + +RE + + Sbjct: 63 GYGPDVAREFGKHLGVE---VKFVQTTSQTRIPLLLNGQIDAEFGPTTNSKIREEVVDFS 119 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSG--ASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + Q I+ +K + +G +I G Y++A N + Sbjct: 120 L---IWNTEQAVILVRKGEPTDPKAYAGTEKTIGATQGAVYIG----YWRATNAGAKFKL 172 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F++ E+ A + D D L A + + + + + A + Q D+ Sbjct: 173 FQQYPELLLAVAQGQVDCVLIDS--LQAELMIEKMSDAKLAVGEPFYRDSSAIMVRQNDS 230 Query: 236 EWYNIVSWTHYAMVTAEELG-ITQKNINQ 263 +W N V+W + +L I +K N+ Sbjct: 231 KWRNWVNWGLQRLWLEGKLQEIYRKYYNE 259 >gi|16129867|ref|NP_416430.1| cystine transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|74311733|ref|YP_310152.1| cystine transporter subunit [Shigella sonnei Ss046] gi|89108755|ref|AP_002535.1| cystine transporter subunit [Escherichia coli str. K-12 substr. W3110] gi|170081568|ref|YP_001730888.1| cysteine ABC transporter periplasmic substrate binding protein [Escherichia coli str. K-12 substr. DH10B] gi|191173292|ref|ZP_03034822.1| cystine-binding periplasmic protein [Escherichia coli F11] gi|218558778|ref|YP_002391691.1| cystine transporter subunit [Escherichia coli S88] gi|227885653|ref|ZP_04003458.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Escherichia coli 83972] gi|238901129|ref|YP_002926925.1| cystine transporter subunit [Escherichia coli BW2952] gi|256022422|ref|ZP_05436287.1| cystine transporter subunit [Escherichia sp. 4_1_40B] gi|300935896|ref|ZP_07150852.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 21-1] gi|300982289|ref|ZP_07175999.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 200-1] gi|300993929|ref|ZP_07180604.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 45-1] gi|301018230|ref|ZP_07182745.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 69-1] gi|306814256|ref|ZP_07448422.1| cystine transporter subunit [Escherichia coli NC101] gi|331657965|ref|ZP_08358927.1| cystine ABC transporter, cystine-binding periplasmic protein [Escherichia coli TA206] gi|331663418|ref|ZP_08364328.1| cystine ABC transporter, cystine-binding periplasmic protein [Escherichia coli TA143] gi|84028139|sp|P0AEN0|FLIY_ECOL6 RecName: Full=Cystine-binding periplasmic protein; Short=CBP; AltName: Full=Protein fliY; AltName: Full=Sulfate starvation-induced protein 7; Short=SSI7; Flags: Precursor gi|84028140|sp|P0AEM9|FLIY_ECOLI RecName: Full=Cystine-binding periplasmic protein; Short=CBP; AltName: Full=Protein fliY; AltName: Full=Sulfate starvation-induced protein 7; Short=SSI7; Flags: Precursor gi|687652|gb|AAC43545.1| FliY [Escherichia coli] gi|1736579|dbj|BAA15740.1| cystine transporter subunit [Escherichia coli str. K12 substr. W3110] gi|1788228|gb|AAC74987.1| cystine transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|73855210|gb|AAZ87917.1| putative periplasmic binding transport protein [Shigella sonnei Ss046] gi|169889403|gb|ACB03110.1| cystine transporter subunit; periplasmic-binding component of ABC superfamily [Escherichia coli str. K-12 substr. DH10B] gi|190906409|gb|EDV66018.1| cystine-binding periplasmic protein [Escherichia coli F11] gi|218365547|emb|CAR03274.1| cystine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli S88] gi|227837226|gb|EEJ47692.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Escherichia coli 83972] gi|238860698|gb|ACR62696.1| cystine transporter subunit [Escherichia coli BW2952] gi|281178982|dbj|BAI55312.1| cystine-binding periplasmic protein precursor [Escherichia coli SE15] gi|284921833|emb|CBG34906.1| cystine ABC transporter, substrate-binding protein (sulfate starvation-induced protein 7) [Escherichia coli 042] gi|294490653|gb|ADE89409.1| cystine-binding periplasmic protein [Escherichia coli IHE3034] gi|300307266|gb|EFJ61786.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 200-1] gi|300399817|gb|EFJ83355.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 69-1] gi|300406430|gb|EFJ89968.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 45-1] gi|300458915|gb|EFK22408.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 21-1] gi|305852415|gb|EFM52866.1| cystine transporter subunit [Escherichia coli NC101] gi|307553934|gb|ADN46709.1| cysteine transport protein ABC superfamily [Escherichia coli ABU 83972] gi|307626603|gb|ADN70907.1| cystine transporter subunit [Escherichia coli UM146] gi|315136557|dbj|BAJ43716.1| cystine-binding periplasmic protein [Escherichia coli DH1] gi|315286626|gb|EFU46059.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 110-3] gi|315290286|gb|EFU49664.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 153-1] gi|315296503|gb|EFU55800.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 16-3] gi|320194368|gb|EFW68999.1| Cystine ABC transporter, periplasmic cystine-binding protein FliY [Escherichia coli WV_060327] gi|323165283|gb|EFZ51071.1| cystine-binding periplasmic protein [Shigella sonnei 53G] gi|323186800|gb|EFZ72120.1| cystine-binding periplasmic protein [Escherichia coli RN587/1] gi|323952415|gb|EGB48288.1| extracellular solute-binding protein 3 [Escherichia coli H252] gi|323956317|gb|EGB52060.1| extracellular solute-binding protein 3 [Escherichia coli H263] gi|323968337|gb|EGB63744.1| extracellular solute-binding protein 3 [Escherichia coli M863] gi|324013512|gb|EGB82731.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 60-1] gi|327253051|gb|EGE64705.1| cystine-binding periplasmic protein [Escherichia coli STEC_7v] gi|330911728|gb|EGH40238.1| cystine ABC transporter, periplasmic cystine-binding protein FliY [Escherichia coli AA86] gi|331056213|gb|EGI28222.1| cystine ABC transporter, cystine-binding periplasmic protein [Escherichia coli TA206] gi|331059217|gb|EGI31194.1| cystine ABC transporter, cystine-binding periplasmic protein [Escherichia coli TA143] Length = 266 Score = 146 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 48/272 (17%), Positives = 93/272 (34%), Gaps = 17/272 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + ++ + ++ S + A +L +K+RG L G+ F+ +G GF+ Sbjct: 8 RQALMGVMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFE 67 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F + L+ + + S P +L SK+ID++ + R+ Sbjct: 68 VEFAQQLAKHLGVEAS---LKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDF--ST 122 Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G ++ K I + L G + V GT ++ + + ++ Sbjct: 123 PYTISGIQALVKKGNEGTIKTADDLKGKKVGVGLGT----NYEEWLRQNVQGVDVRTYDD 178 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R R DA D L AL L + + S+ A+ +G+ + Sbjct: 179 DPTKYQDLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLL 236 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 V+ M L + D T Sbjct: 237 KAVNDAIAEMQKDGTLQALSE--KWFGADVTK 266 >gi|293553345|ref|ZP_06673981.1| amino acid ABC transporter, amino acid-binding protein [Enterococcus faecium E1039] gi|291602569|gb|EFF32785.1| amino acid ABC transporter, amino acid-binding protein [Enterococcus faecium E1039] Length = 271 Score = 146 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 48/277 (17%), Positives = 95/277 (34%), Gaps = 14/277 (5%) Query: 1 MYKDFFVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K+ F+ L +L F S T+A I + + G++ V +G Sbjct: 1 MKKNSFLFALIAGLLLFAGCSNKKTSADNWATINEEKKIVIGLDDTFVPMGFRDKDGKLT 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D +A+ + + P++ + L + ID++ T RE + Sbjct: 61 GFDIDLAKAVFEQYG---ITVDFQPIDWSMKEFELNNGTIDLIWNGYSKTPAREKKVQF- 116 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPI 174 + Q I K+ GI++ Q++ + Q G++ + K + Sbjct: 117 -TKPYMENDQVLITPKESGITNFGQMNNKRLGAQNGSSGYDVFTKQPEVLKEIVKNQDAV 175 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +++ E ++ R D D + + I A + D Sbjct: 176 LYDSFNEALIDLKSRRVDGLLMDKVYADYYLKQRNELEDFNITKGSYESEDFAVGARKSD 235 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + V + A+ E+ G QK ++ + P Sbjct: 236 STL---VKKINEALDQLEKTGEFQKISDKWFGEDVTP 269 >gi|42518509|ref|NP_964439.1| ABC transporter solute-binding component [Lactobacillus johnsonii NCC 533] gi|41582794|gb|AAS08405.1| ABC transporter solute-binding component [Lactobacillus johnsonii NCC 533] Length = 262 Score = 146 bits (370), Expect = 4e-33, Method: Composition-based stats. Identities = 53/267 (19%), Positives = 92/267 (34%), Gaps = 10/267 (3%) Query: 1 MYK--DFF-VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K F + I+ L + + IK RG L G++ V + NG Sbjct: 1 MKKIIRFLGLLIIVLASVGVVGCQRQENSWQAIKSRGTLVIGVDDSFVPMDFRQKNGKLV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD +A+ I P + ++ + L++ ID++ T R + Sbjct: 61 GFDVDLAKAVCKEIGLKPD---FQTIDWSMKETELRNGTIDVIWNGYTKTKARAKKVAF- 116 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV-F 176 + Q + K +GI++ Q+ G + VQ G++ L +Y K + V + Sbjct: 117 -SKPYLENDQILVTRKNEGINNYRQMKGKILGVQTGSSGADDLDNYPKVLKKRVKSTVLY 175 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + +A R D D + E + I + D Sbjct: 176 DTYNNAFIDLKAGRIDGLLIDGVYANYYLAHSKYQKEFKKEKLPYPSEKFSVGINKKDKT 235 Query: 237 WYNIVSWTHYAMVTAEEL-GITQKNIN 262 N ++ + EL I +K N Sbjct: 236 LKNKINQALDHLEKTGELKKIREKWFN 262 >gi|26248187|ref|NP_754227.1| cystine transporter subunit [Escherichia coli CFT073] gi|91211139|ref|YP_541125.1| cystine transporter subunit [Escherichia coli UTI89] gi|117624062|ref|YP_852975.1| cystine transporter subunit [Escherichia coli APEC O1] gi|237705876|ref|ZP_04536357.1| cystine-binding periplasmic protein [Escherichia sp. 3_2_53FAA] gi|253773127|ref|YP_003035958.1| cystine transporter subunit [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|331647513|ref|ZP_08348605.1| cystine ABC transporter, cystine-binding periplasmic protein [Escherichia coli M605] gi|26108591|gb|AAN80794.1|AE016762_47 Cystine-binding periplasmic protein precursor [Escherichia coli CFT073] gi|91072713|gb|ABE07594.1| cystine-binding periplasmic protein precursor [Escherichia coli UTI89] gi|115513186|gb|ABJ01261.1| cystine-binding periplasmic protein precursor [Escherichia coli APEC O1] gi|226900633|gb|EEH86892.1| cystine-binding periplasmic protein [Escherichia sp. 3_2_53FAA] gi|253324171|gb|ACT28773.1| extracellular solute-binding protein family 3 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|260448963|gb|ACX39385.1| extracellular solute-binding protein family 3 [Escherichia coli DH1] gi|331043237|gb|EGI15375.1| cystine ABC transporter, cystine-binding periplasmic protein [Escherichia coli M605] Length = 285 Score = 146 bits (370), Expect = 4e-33, Method: Composition-based stats. Identities = 48/272 (17%), Positives = 93/272 (34%), Gaps = 17/272 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + ++ + ++ S + A +L +K+RG L G+ F+ +G GF+ Sbjct: 27 RQALMGVMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFE 86 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F + L+ + + S P +L SK+ID++ + R+ Sbjct: 87 VEFAQQLAKHLGVEAS---LKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDF--ST 141 Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G ++ K I + L G + V GT ++ + + ++ Sbjct: 142 PYTISGIQALVKKGNEGTIKTADDLKGKKVGVGLGT----NYEEWLRQNVQGVDVRTYDD 197 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R R DA D L AL L + + S+ A+ +G+ + Sbjct: 198 DPTKYQDLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLL 255 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 V+ M L + D T Sbjct: 256 KAVNDAIAEMQKDGTLQALSE--KWFGADVTK 285 >gi|82776400|ref|YP_402749.1| cystine transporter subunit [Shigella dysenteriae Sd197] gi|81240548|gb|ABB61258.1| putative periplasmic binding transport protein [Shigella dysenteriae Sd197] Length = 266 Score = 146 bits (370), Expect = 4e-33, Method: Composition-based stats. Identities = 48/272 (17%), Positives = 95/272 (34%), Gaps = 17/272 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + ++ + ++ S + A +L +K+RG L G+ F+ +G GF+ Sbjct: 8 RQALIGVMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFE 67 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F + L+ + + S P +L SK+ID++ + R+ Sbjct: 68 VEFAQQLAKHLGVEAS---LKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDF--ST 122 Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G ++ K I + + L G + V GT ++ + + ++ Sbjct: 123 PYTISGIQALVKKGNEGTIKTAADLKGKKVGVGLGT----NYEEWLRQNVQGVDVRTYDD 178 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R R DA D L AL L + ++ S+ A+ +G+ + Sbjct: 179 DPTKYQDLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEVFSRQESGVALRKGNEDLL 236 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 V+ M L + D T Sbjct: 237 KAVNDAIAEMQKDGTLQALSE--KWFGADVTK 266 >gi|15802355|ref|NP_288381.1| cystine transporter subunit [Escherichia coli O157:H7 EDL933] gi|15831913|ref|NP_310686.1| cystine transporter subunit [Escherichia coli O157:H7 str. Sakai] gi|168751846|ref|ZP_02776868.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4113] gi|168758231|ref|ZP_02783238.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4401] gi|168771524|ref|ZP_02796531.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4486] gi|168783314|ref|ZP_02808321.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4076] gi|168802264|ref|ZP_02827271.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str. EC508] gi|189405428|ref|ZP_02815331.2| cystine-binding periplasmic protein [Escherichia coli O157:H7 str. EC869] gi|195939224|ref|ZP_03084606.1| cystine transporter subunit [Escherichia coli O157:H7 str. EC4024] gi|208810217|ref|ZP_03252093.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4206] gi|208817069|ref|ZP_03258189.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4045] gi|208821419|ref|ZP_03261739.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4042] gi|209396748|ref|YP_002271034.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4115] gi|217329017|ref|ZP_03445098.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str. TW14588] gi|254793570|ref|YP_003078407.1| cystine transporter subunit [Escherichia coli O157:H7 str. TW14359] gi|261227585|ref|ZP_05941866.1| extracellular solute-binding protein family 3 [Escherichia coli O157:H7 str. FRIK2000] gi|261255815|ref|ZP_05948348.1| extracellular solute-binding protein family 3 [Escherichia coli O157:H7 str. FRIK966] gi|291283097|ref|YP_003499915.1| Cystine-binding periplasmic protein [Escherichia coli O55:H7 str. CB9615] gi|12516018|gb|AAG56935.1|AE005414_12 putative periplasmic binding transport protein [Escherichia coli O157:H7 str. EDL933] gi|13362127|dbj|BAB36082.1| putative periplasmic binding transport protein [Escherichia coli O157:H7 str. Sakai] gi|188014185|gb|EDU52307.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4113] gi|188999320|gb|EDU68306.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4076] gi|189354911|gb|EDU73330.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4401] gi|189359726|gb|EDU78145.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4486] gi|189370199|gb|EDU88615.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str. EC869] gi|189375717|gb|EDU94133.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str. EC508] gi|208724733|gb|EDZ74440.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4206] gi|208731412|gb|EDZ80101.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4045] gi|208741542|gb|EDZ89224.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4042] gi|209158148|gb|ACI35581.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4115] gi|209766998|gb|ACI81811.1| putative periplasmic binding transport protein [Escherichia coli] gi|209767000|gb|ACI81812.1| putative periplasmic binding transport protein [Escherichia coli] gi|209767002|gb|ACI81813.1| putative periplasmic binding transport protein [Escherichia coli] gi|209767004|gb|ACI81814.1| putative periplasmic binding transport protein [Escherichia coli] gi|209767006|gb|ACI81815.1| putative periplasmic binding transport protein [Escherichia coli] gi|217318364|gb|EEC26791.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str. TW14588] gi|254592970|gb|ACT72331.1| cystine transporter subunit; periplasmic-binding component of ABC superfamily [Escherichia coli O157:H7 str. TW14359] gi|290762970|gb|ADD56931.1| Cystine-binding periplasmic protein [Escherichia coli O55:H7 str. CB9615] gi|320191895|gb|EFW66542.1| Cystine ABC transporter, periplasmic cystine-binding protein FliY [Escherichia coli O157:H7 str. EC1212] gi|320641768|gb|EFX11156.1| cystine transporter subunit [Escherichia coli O157:H7 str. G5101] gi|320647128|gb|EFX15961.1| cystine transporter subunit [Escherichia coli O157:H- str. 493-89] gi|320652411|gb|EFX20709.1| cystine transporter subunit [Escherichia coli O157:H- str. H 2687] gi|320658013|gb|EFX25775.1| cystine transporter subunit [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320658585|gb|EFX26279.1| cystine transporter subunit [Escherichia coli O55:H7 str. USDA 5905] gi|320668483|gb|EFX35310.1| cystine transporter subunit [Escherichia coli O157:H7 str. LSU-61] gi|326342329|gb|EGD66110.1| Cystine ABC transporter, periplasmic cystine-binding protein FliY [Escherichia coli O157:H7 str. 1044] gi|326344835|gb|EGD68582.1| Cystine ABC transporter, periplasmic cystine-binding protein FliY [Escherichia coli O157:H7 str. 1125] Length = 266 Score = 146 bits (370), Expect = 4e-33, Method: Composition-based stats. Identities = 48/272 (17%), Positives = 93/272 (34%), Gaps = 17/272 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + ++ + ++ S + A +L +K+RG L G+ F+ +G GF+ Sbjct: 8 RQALMGVMAVALIAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFE 67 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F + L+ + + S P +L SK+ID++ + R+ Sbjct: 68 VEFAQQLAKHLGVEAS---LKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDF--ST 122 Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G ++ K I + L G + V GT ++ + + ++ Sbjct: 123 PYTISGIQALVKKGNEGTIKTADDLKGKKVGVGLGT----NYEEWLRQNVQGVDVRTYDD 178 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R R DA D L AL L + + S+ A+ +G+ + Sbjct: 179 DPTKYQDLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLL 236 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 V+ M L + D T Sbjct: 237 KAVNDAIAEMQKDGTLQALSE--KWFGADVTK 266 >gi|120403417|ref|YP_953246.1| extracellular solute-binding protein [Mycobacterium vanbaalenii PYR-1] gi|119956235|gb|ABM13240.1| amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium vanbaalenii PYR-1] Length = 279 Score = 146 bits (370), Expect = 4e-33, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 82/231 (35%), Gaps = 13/231 (5%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 + G G + +G GFDVD ++ + P KI++ + +R +Q+ Sbjct: 43 TIVIGTKFDQPGLGQKNPDGTMSGFDVDVATYVAGELGYTPDKIEWKESPSAQRENLIQN 102 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQL-SGASICVQA 152 Q+ ++ T R+ + A GQ ++ I+ + L + +C + Sbjct: 103 GQVTFIAATYSITDARKEKVSFA--GPYLITGQSLLVRSDNTDITGEASLENNKILCSVS 160 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 G+T + D ++ A + DA T D L + P Sbjct: 161 GSTPAQKIKD----KYQGVQLQQYDTYSACIDALKNGAVDAVTTDEVILAGYAAQS--PG 214 Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 I+ + S+ + + DTE ++ M EE G ++ ++ Sbjct: 215 AFKIVGEPFSEERYGIGLKKDDTELRTKINDALKKM---EESGAWKEAFDK 262 >gi|69248237|ref|ZP_00604687.1| extracellular solute-binding protein, family 3 [Enterococcus faecium DO] gi|257880071|ref|ZP_05659724.1| extracellular solute-binding protein [Enterococcus faecium 1,230,933] gi|257882306|ref|ZP_05661959.1| extracellular solute-binding protein [Enterococcus faecium 1,231,502] gi|257891162|ref|ZP_05670815.1| extracellular solute-binding protein [Enterococcus faecium 1,231,410] gi|257893976|ref|ZP_05673629.1| extracellular solute-binding protein [Enterococcus faecium 1,231,408] gi|258614595|ref|ZP_05712365.1| amino acid ABC transporter, amino acid-binding protein [Enterococcus faecium DO] gi|260560316|ref|ZP_05832492.1| extracellular solute-binding protein family 3 [Enterococcus faecium C68] gi|261208253|ref|ZP_05922926.1| extracellular solute-binding protein family 3 [Enterococcus faecium TC 6] gi|289565945|ref|ZP_06446384.1| extracellular solute-binding protein, family 3 [Enterococcus faecium D344SRF] gi|293563076|ref|ZP_06677542.1| amino acid ABC transporter, amino acid-binding protein [Enterococcus faecium E1162] gi|294616568|ref|ZP_06696345.1| amino acid ABC transporter, amino acid-binding protein [Enterococcus faecium E1636] gi|294618838|ref|ZP_06698359.1| amino acid ABC transporter, amino acid-binding protein [Enterococcus faecium E1679] gi|294623620|ref|ZP_06702458.1| amino acid ABC transporter, amino acid-binding protein [Enterococcus faecium U0317] gi|314940256|ref|ZP_07847429.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecium TX0133a04] gi|314941686|ref|ZP_07848565.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecium TX0133C] gi|314947670|ref|ZP_07851079.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecium TX0082] gi|314950657|ref|ZP_07853737.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecium TX0133A] gi|314992476|ref|ZP_07857897.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecium TX0133B] gi|314996870|ref|ZP_07861875.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecium TX0133a01] gi|68194488|gb|EAN08986.1| extracellular solute-binding protein, family 3 [Enterococcus faecium DO] gi|257814299|gb|EEV43057.1| extracellular solute-binding protein [Enterococcus faecium 1,230,933] gi|257817964|gb|EEV45292.1| extracellular solute-binding protein [Enterococcus faecium 1,231,502] gi|257827522|gb|EEV54148.1| extracellular solute-binding protein [Enterococcus faecium 1,231,410] gi|257830355|gb|EEV56962.1| extracellular solute-binding protein [Enterococcus faecium 1,231,408] gi|260073661|gb|EEW61987.1| extracellular solute-binding protein family 3 [Enterococcus faecium C68] gi|260077510|gb|EEW65228.1| extracellular solute-binding protein family 3 [Enterococcus faecium TC 6] gi|289162229|gb|EFD10090.1| extracellular solute-binding protein, family 3 [Enterococcus faecium D344SRF] gi|291590578|gb|EFF22310.1| amino acid ABC transporter, amino acid-binding protein [Enterococcus faecium E1636] gi|291594913|gb|EFF26269.1| amino acid ABC transporter, amino acid-binding protein [Enterococcus faecium E1679] gi|291596946|gb|EFF28159.1| amino acid ABC transporter, amino acid-binding protein [Enterococcus faecium U0317] gi|291604990|gb|EFF34458.1| amino acid ABC transporter, amino acid-binding protein [Enterococcus faecium E1162] gi|313589013|gb|EFR67858.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecium TX0133a01] gi|313592936|gb|EFR71781.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecium TX0133B] gi|313597204|gb|EFR76049.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecium TX0133A] gi|313599458|gb|EFR78301.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecium TX0133C] gi|313640576|gb|EFS05156.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecium TX0133a04] gi|313645911|gb|EFS10491.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecium TX0082] Length = 271 Score = 146 bits (370), Expect = 4e-33, Method: Composition-based stats. Identities = 48/277 (17%), Positives = 94/277 (33%), Gaps = 14/277 (5%) Query: 1 MYKDFFVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K F+ L +L F S T+A I + + G++ V +G Sbjct: 1 MKKTSFLFALIAGLLLFAGCSNKKTSADNWATINEEKKIVIGLDDTFVPMGFRDKDGKLT 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D +A+ + + P++ + L + ID++ T RE + Sbjct: 61 GFDIDLAKAVFEQYG---ITVDFQPIDWSMKEFELNNGTIDLIWNGYSKTPAREKKVQF- 116 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPI 174 + Q I K+ GI++ Q++ + Q G++ + K + Sbjct: 117 -TKPYMENDQVLITPKESGITNFGQMNNKRLGAQNGSSGYDVFTKQPEVLKEIVKNQDAV 175 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +++ E ++ R D D + + I A + D Sbjct: 176 LYDSFNEALIDLKSRRVDGLLMDKVYADYYLKQRNELEDFNITKGSYESEDFAVGARKSD 235 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + V + A+ E+ G QK ++ + P Sbjct: 236 STL---VKKINEALDQLEKTGEFQKISDKWFGEDVTP 269 >gi|311279130|ref|YP_003941361.1| extracellular solute-binding protein family 3 [Enterobacter cloacae SCF1] gi|308748325|gb|ADO48077.1| extracellular solute-binding protein family 3 [Enterobacter cloacae SCF1] Length = 266 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 49/271 (18%), Positives = 93/271 (34%), Gaps = 17/271 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + ++ + ++ S T A+ +L +K+RG L+ G+ F+ +G GF+ Sbjct: 8 RQALMGVMAVALMAGVSAKTFAAENLLNQVKERGSLRVGLEGTYPPFSFQGDDGKLTGFE 67 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F L+ + K P +L SK+ID++ + R+ Sbjct: 68 VEFANELAKHLG---VKADLKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDF--ST 122 Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G ++ K I + + L G + V GT ++ + + ++ Sbjct: 123 PYTVSGIQALVKKGNEGTIKTAADLKGKKVGVGLGT----NYEEWLRKNVQGVDIRTYDD 178 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R R DA D L AL L + + S+ A+ +G+ + Sbjct: 179 DPTKYQDLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNDDLL 236 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 V M L + D T Sbjct: 237 KAVDNAIAEMQKDGSLKALSE--KWFGADVT 265 >gi|225163910|ref|ZP_03726202.1| extracellular solute-binding protein family 3 [Opitutaceae bacterium TAV2] gi|224801487|gb|EEG19791.1| extracellular solute-binding protein family 3 [Opitutaceae bacterium TAV2] Length = 269 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 52/289 (17%), Positives = 98/289 (33%), Gaps = 32/289 (11%) Query: 1 MYKDFFVSILCLII-LFFTSFSTNASIL-----GDIKKRG--FLKCGINTGLVGFAEVKA 52 M K + ++ L L F + S K G + G++ Sbjct: 1 MKKRIALGLMALTASLLFAACGQKESTSPSGADQTAPKPGARKIIVGLDDNFPPMGFRNE 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 GFD+D R + ++++ P++ + L K++D L T R+ Sbjct: 61 QNQIVGFDIDMAREAGKRMG---IEVEFKPIDWSAKEAELSGKRVDALWNGLTITEERKK 117 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 +G + Q ++ K GI + + L+G ++ VQ G++ + Sbjct: 118 KIGF--TTPYMENHQIIVVTTKSGIKNKAGLAGKTVGVQEGSSAVQAVEKDADVRKTFRD 175 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 F A R DA D + T +P+E+V+L + + Sbjct: 176 LKAFGDNVTALMDLSAGRLDAVVVD--EVVGRYYTAKKPAEYVVLTEHFGTEDYGVGTRK 233 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR-FLGID 280 DTE LG Q ++ + +D T+ + + + G D Sbjct: 234 DDTEL----------------LGKLQNALDAMKQDGTSARIAKQWFGAD 266 >gi|189404437|ref|ZP_02789465.2| cystine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4501] gi|189365555|gb|EDU83971.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4501] Length = 285 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 48/272 (17%), Positives = 93/272 (34%), Gaps = 17/272 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + ++ + ++ S + A +L +K+RG L G+ F+ +G GF+ Sbjct: 27 RQALMGVMAVALIAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFE 86 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F + L+ + + S P +L SK+ID++ + R+ Sbjct: 87 VEFAQQLAKHLGVEAS---LKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDF--ST 141 Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G ++ K I + L G + V GT ++ + + ++ Sbjct: 142 PYTISGIQALVKKGNEGTIKTADDLKGKKVGVGLGT----NYEEWLRQNVQGVDVRTYDD 197 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R R DA D L AL L + + S+ A+ +G+ + Sbjct: 198 DPTKYQDLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLL 255 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 V+ M L + D T Sbjct: 256 KAVNDAIAEMQKDGTLQALSE--KWFGADVTK 285 >gi|237785696|ref|YP_002906401.1| glutamate ABC transporter solute-binding protein [Corynebacterium kroppenstedtii DSM 44385] gi|237758608|gb|ACR17858.1| glutamate ABC transport system, solute-binding protein [Corynebacterium kroppenstedtii DSM 44385] Length = 317 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 50/286 (17%), Positives = 92/286 (32%), Gaps = 22/286 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + L S S+L +IK G + G G + + G D Sbjct: 32 MMAAVTALVFVTPTLTACGSSEPVSVLDEIKA-GHIVVGTKYDQPGMGMRTPDKKFVGVD 90 Query: 61 VDFCRALSSAI----FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 D R + I D KI + + +R +++ ++ +++ R + + Sbjct: 91 PDVSRYVIDHIAEKNGWDKPKITWRETPSAQRETLIKNGEVGMITATYSINKGR--ANAV 148 Query: 117 AFRPITYFDGQGFIMH-KKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPI 174 AF Q ++ K GI S++ L G +C +G+T + + Sbjct: 149 AFGGPYLVTHQALLVRDKDTGIKSLTDLNKGKRLCSVSGSTPAQKVKEALPE----VQLQ 204 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP------DIISKSPLAP 228 F+ A + DA T D + LY P E ++ + Sbjct: 205 EFDSYSSCVEALHQKKVDALTTDATILYGFATQ--YPGEFRVVDMKQDDGSWWTDEHYGI 262 Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELG-ITQKNINQVSKDTTNPDV 273 +GDT+ ++ M + I KN+ P + Sbjct: 263 GHAKGDTKSTEAINDALKDMWASGAYASIVHKNLGNDFPVGDEPAI 308 >gi|289642305|ref|ZP_06474453.1| extracellular solute-binding protein family 3 [Frankia symbiont of Datisca glomerata] gi|289507837|gb|EFD28788.1| extracellular solute-binding protein family 3 [Frankia symbiont of Datisca glomerata] Length = 286 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 47/234 (20%), Positives = 86/234 (36%), Gaps = 11/234 (4%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 + + + G + G F GD +GFDV+ + ++ + DP I ++ Sbjct: 34 AAGTTAARLAEAGKVTVGTKFDQPLFGLKGLGGDVEGFDVEIAKIIADGLGIDPDDITFV 93 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSV 140 + +R A+Q ++D + R+ + A Y GQ ++ K I+ Sbjct: 94 ETPSAQREGAIQQSRVDFIVATYTINDKRKQLISFA--GPYYQAGQDIMVKKDNTTITGP 151 Query: 141 SQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 L A +C +G+T + +Y A N ++F+ + A R + DA T D Sbjct: 152 ESLRATNAKVCSVSGSTPAEKIKEYADASN----IVLFDVYSKCADALRTGQVDAVTTDN 207 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 L L + I+ + P I +GDT + + A Sbjct: 208 VVLLGLVDASG--GAFKIVGKPFTTEPYGIGIKKGDTAFCQFIDEQLTAAAADG 259 >gi|160895679|ref|YP_001561261.1| extracellular solute-binding protein [Delftia acidovorans SPH-1] gi|160361263|gb|ABX32876.1| extracellular solute-binding protein family 3 [Delftia acidovorans SPH-1] Length = 268 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 38/241 (15%), Positives = 85/241 (35%), Gaps = 11/241 (4%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 +A +L +I+K G L+ I F + + +G+D+D ++ + K++ +P Sbjct: 31 HADMLANIQKAGVLRVAIPQDFPPFGSLGTDLKLQGYDIDMAALVAQELG---VKVELVP 87 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + + R L + + DI+ + R + + K I + + Sbjct: 88 VTSTNRIPFLTTGKADIVISSLGKNAERAKVIDFTQAYAPFPKS--VYGPKDVSIKAPAD 145 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+G ++ V G+T +L L A +E +Y + T Sbjct: 146 LAGKTVGVTRGSTEDLALTQVAPA---SATIKRYEDNNATAQSYLTGQVQLVTLGNIV-- 200 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNI 261 A + + + + +P + +G+ V + L G++Q+ + Sbjct: 201 ANAVNERTRLRQLDVKFAVEDTPCYIGVAKGEPALLQKVDAIITKLKADGRLTGLSQRWM 260 Query: 262 N 262 Sbjct: 261 K 261 >gi|300933043|ref|ZP_07148299.1| glutamate ABC transport system, solute-binding protein [Corynebacterium resistens DSM 45100] Length = 293 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 46/283 (16%), Positives = 89/283 (31%), Gaps = 16/283 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M V L + S A L + K G + G G +++G D Sbjct: 8 MRIVAAVMTLFSVAALSACGSNEARTLLESIKSGHVILGTKYDQPGLGVRTPAKEYEGVD 67 Query: 61 VDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 D R + I + K+ + + +R +++ ++D+++ R S+ Sbjct: 68 TDVSRYVVKYIAEKNGWAMPKMTWRETPSAQRETLIKNGEVDMIAATYSINKGRYKSVDF 127 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 Q ++ K I +S + +G +C G+T A K + Sbjct: 128 --GGPYLQTHQAILVRKDDPIQGLSDMGAGTKVCSVTGSTP----AQKIKKALPEVQLQE 181 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL----PDIISKSPLAPAII 231 F+ A + DA + D + L V L + + Sbjct: 182 FDTYSACVEALARGKVDALSTDATILAGFAEQYPGTMRVVELKKDDGSYWTNENYGIGLA 241 Query: 232 QGDTEWYNIVSWTHYAMVTAEE-LGITQKNINQVSKDTTNPDV 273 +G + ++ M + E I +KN+ K P + Sbjct: 242 KGQPDAVKAINDALNEMHDSGEYERIIKKNLGDAIKPGDKPKI 284 >gi|302554581|ref|ZP_07306923.1| glutamate binding protein [Streptomyces viridochromogenes DSM 40736] gi|302472199|gb|EFL35292.1| glutamate binding protein [Streptomyces viridochromogenes DSM 40736] Length = 279 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 40/275 (14%), Positives = 87/275 (31%), Gaps = 16/275 (5%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M + + + L T+ + + + GI G + G Sbjct: 1 MKLRKVTAASATVFALALTATACGGNNSTGGDSGSGGGKSITVGIKFDQPGLGQKTPQG- 59 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + GFDVD ++ + + +I++ + +R L+ +D ++ T R+ + Sbjct: 60 YAGFDVDVATYVAKKLGYNADQIEWKESKSGDRETMLKRGDVDFIAATYSITPERQKLVD 119 Query: 116 LAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 A Q ++ I S L+ A +C G+T+ + D K Sbjct: 120 FA--GPYLLAHQDVLVRADDSKIKSPKDLNNAKLCSVTGSTSAQNVKD---KLAPKAQLQ 174 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + DA T D S L + + ++ + +G Sbjct: 175 PYPTYSACLPGLQNGAVDALTTDDSILAGYASQAQFKGKFKLGGFKLTNENYGIGVKKGS 234 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 ++ + A+ G QK +++ + Sbjct: 235 ----DLKDKINKALEDMVADGAWQKAVDKNLGPAS 265 >gi|215487125|ref|YP_002329556.1| cystine transporter subunit [Escherichia coli O127:H6 str. E2348/69] gi|215265197|emb|CAS09586.1| cystine transporter subunit [Escherichia coli O127:H6 str. E2348/69] Length = 266 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 48/272 (17%), Positives = 93/272 (34%), Gaps = 17/272 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + ++ + ++ S + A +L +K+RG L G+ F+ +G GF+ Sbjct: 8 RQALMGVMAVALVAGMSVKSFADEGLLNKVKERGTLLVGMEGTYPPFSFQGDDGKLTGFE 67 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F + L+ + + S P +L SK+ID++ + R+ Sbjct: 68 VEFAQQLAKHLGVEAS---LKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDF--ST 122 Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G ++ K I + L G + V GT ++ + + ++ Sbjct: 123 PYTISGIQALVKKGNEGTIKTADDLKGKKVGVGLGT----NYEEWLRQNVQGVDVRTYDD 178 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R R DA D L AL L + + S+ A+ +G+ + Sbjct: 179 DPTKYQDLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLL 236 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 V+ M L + D T Sbjct: 237 KAVNDAIAEMQKDGTLQALSE--KWFGADVTK 266 >gi|331668614|ref|ZP_08369462.1| cystine ABC transporter, cystine-binding periplasmic protein [Escherichia coli TA271] gi|331063808|gb|EGI35719.1| cystine ABC transporter, cystine-binding periplasmic protein [Escherichia coli TA271] Length = 262 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 46/261 (17%), Positives = 92/261 (35%), Gaps = 15/261 (5%) Query: 3 KDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + ++ + ++ S + A +L +K+RG L G+ F+ +G GF+ Sbjct: 8 RQALMGVMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFE 67 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F + L+ + + S P +L SK+ID++ + R+ Sbjct: 68 VEFAQQLAKHLGVEAS---LKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDF--ST 122 Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G ++ K I + + L G + V GT ++ + + ++ Sbjct: 123 PYTISGIQALVKKGNEGTIKTAADLKGKKVGVGLGT----NYEEWLRQNVQGVDVRTYDD 178 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R R DA D L AL L + + S+ A+ +G+ + Sbjct: 179 DPTKYQDLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLL 236 Query: 239 NIVSWTHYAMVTAEELGITQK 259 V+ M L + Sbjct: 237 KAVNDAIAEMQKDGTLQALSE 257 >gi|28210296|ref|NP_781240.1| cystine/glutamine-binding periplasmic protein [Clostridium tetani E88] gi|28202732|gb|AAO35177.1| cystine/glutamine-binding periplasmic protein [Clostridium tetani E88] Length = 271 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 50/278 (17%), Positives = 89/278 (32%), Gaps = 27/278 (9%) Query: 1 MYK--DFFVSILCLIILFFTSFSTNA---------SILGDIKKRGFLKCGINTGLVGFAE 49 M K +S L + +F + ++L IK +K G+ Sbjct: 1 MKKILALLLSTLVVGSIFVGCSKNDNKEKDDKKNVNVLQKIKDNKVIKVGLEDTYPPMEF 60 Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 + GFD+D C + + K++Y+ ++L S +ID+ + T Sbjct: 61 RNEKNELIGFDIDLCDEIGKRLGG---KVEYVMTEFGGLMMSLNSNKIDMSASAISITEE 117 Query: 110 REISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168 R+ GQ ++ K I L G + Q GTT E+ K Sbjct: 118 RKKEAEF--TKPYVDSGQALVVKKGNTSIKDEKDLKGKIVGAQLGTTGEIA----AKKIE 171 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 +++V ++ R DA D SE + + + P+ Sbjct: 172 GVKEVKAYDKVPQVFQDLEIGRIDAVIVDEFVGRYYLSKQKDKSEVI---KSLEQEPIGI 228 Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 A +G+ E V M+ + G K + Sbjct: 229 AFKKGEKELQEEVQKIIDEMI---KDGTMSKISEKWFG 263 >gi|254239636|ref|ZP_04932958.1| hypothetical protein PA2G_00253 [Pseudomonas aeruginosa 2192] gi|126193014|gb|EAZ57077.1| hypothetical protein PA2G_00253 [Pseudomonas aeruginosa 2192] Length = 273 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 50/259 (19%), Positives = 90/259 (34%), Gaps = 7/259 (2%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 + A L DI + G L+C + A + GFDVD+C L+ A+ K Sbjct: 20 AGLAQADKLDDIIESGKLRCAVTLDFPPMGSRDAQNNPVGFDVDYCNDLAKAL---DVKA 76 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + + +R AL S + D++ +T TL R ++G++ + + + I+ Sbjct: 77 EIVETPFPDRIPALVSGRADVIVASTSDTLERAKTIGMSIPYFAFVKV--VLTREDTSIA 134 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFERVEEIDAAYRAHRCDAYTGD 197 S L G + AGT L L KA K ++ + A DA Sbjct: 135 SYEDLKGRPVGGTAGTFEALALEKDSKAWGDAKGSFRAYQSEADTALAISQGHIDATVVS 194 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-I 256 + + + + +A + + N ++ V + Sbjct: 195 STVAASWIKSGKYKGLKIAGDAPYDIDYVALGAKRNEYGLLNYLNLFINQQVRTGRYAEL 254 Query: 257 TQKNINQVSKDTTNPDVQR 275 QK + + + T V R Sbjct: 255 AQKWVGGTAPELTTSAVYR 273 >gi|257885500|ref|ZP_05665153.1| extracellular solute-binding protein [Enterococcus faecium 1,231,501] gi|257821356|gb|EEV48486.1| extracellular solute-binding protein [Enterococcus faecium 1,231,501] Length = 271 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 48/277 (17%), Positives = 94/277 (33%), Gaps = 14/277 (5%) Query: 1 MYKDFFVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K F+ L +L F S T+A I + + G++ V +G Sbjct: 1 MKKTSFLFALIAGLLLFAGCSNKKTSADNWATINEEKKIVIGLDDTFVPMGFRDKDGKLT 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D +A+ + + P++ + L + ID++ T RE + Sbjct: 61 GFDIDLAKAVFEQYG---ITVDFQPIDWSMKEFELNNGTIDLIWNGYSKTPAREKKVQF- 116 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPI 174 + Q I K+ GI++ Q++ + Q G++ + K + Sbjct: 117 -TKPYMENDQVLITPKESGITNFGQMNNKRLGAQNGSSGYDVFTKQPEVLKEIVKNQDAV 175 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +++ E ++ R D D + + I A + D Sbjct: 176 LYDSFNEALIDLKSRRVDGLLMDKVYADYYLKQGNELEDFNITKGSYESEDFAVGARKSD 235 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + V + A+ E+ G QK ++ + P Sbjct: 236 STL---VKKINEALDQLEKTGEFQKISDKWFGEDVTP 269 >gi|323165232|gb|EFZ51022.1| general L-amino acid-binding periplasmic aapJ domain protein [Shigella sonnei 53G] Length = 93 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 42/95 (44%), Positives = 64/95 (67%), Gaps = 2/95 (2%) Query: 248 MVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYG 307 M+ AEE+GI +N+++ + + PD+ LG + + G+ L L W Y II+ +GNY Sbjct: 1 MLNAEEMGINSQNVDEKAANPATPDMAHLLGKEG--DYGKDLKLDNKWAYNIIKQVGNYS 58 Query: 308 EMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 59 EIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 93 >gi|119488108|ref|ZP_01621552.1| hypothetical protein L8106_11942 [Lyngbya sp. PCC 8106] gi|119455397|gb|EAW36536.1| hypothetical protein L8106_11942 [Lyngbya sp. PCC 8106] Length = 301 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 41/269 (15%), Positives = 100/269 (37%), Gaps = 23/269 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M +S+ L++ + A L + + G L+ G+ + F+ + +++G+ Sbjct: 1 MNTKITISLFSLLLTVGFQLPSLAETVLEKVNRTGVLRVGVREDAIPFSYSNESNNFEGY 60 Query: 60 DVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 V+ + + + ++Q P+ + RF ++++ +D++ T+ RE ++ Sbjct: 61 SVELMELIHLRLEQELNRSIQLQLKPVTIQNRFSSVENGTVDLVCGADSITVEREQTVEF 120 Query: 117 AFRPITYFDGQGFIMHK------KKGISSVSQLS-----GASICVQAGTTTELTLADYFK 165 + + G ++ + + + +L I GTTT+ + Sbjct: 121 SI--PFFTTGIQLLVQQENAERFDPTLRTEEELEQIAPGNVLIAFIQGTTTDTNFKPIYP 178 Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA--LKLTNDRPSEHVILPDIISK 223 + + + E +++ DA D L K D S +I + +S Sbjct: 179 EADWQ----LLGSRTEGLRRLKSNEIDAIASDGILLIGEIWKQGEDMKSYRLIPQEPLSF 234 Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 Q +T+W + ++ T + E Sbjct: 235 ENYGCIFPQNNTDWGSFINSTITSTENTE 263 >gi|328887000|emb|CCA60239.1| amino acid ABC transporter, amino acid-binding protein [Streptomyces venezuelae ATCC 10712] Length = 291 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 43/257 (16%), Positives = 81/257 (31%), Gaps = 13/257 (5%) Query: 13 IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72 + L F+ A+ + + GI G +G + GFDVD ++ + Sbjct: 29 LSLTSAGFANGAAAVPADHGGDKITVGIKYDQPGIGLKTPDGTYTGFDVDVATYIAKELG 88 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 DPS I + + +R LQ +D ++ + R + A Q ++ Sbjct: 89 HDPSDIVWKEAKSADRETLLQRGDVDFIAASYSINDERAKKVDFA--GPYLLAHQDVLIR 146 Query: 133 -KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191 I S L+ +C G+T+ + + + E Sbjct: 147 ADDDSIKKPSDLNNKKLCSVTGSTSAQNVKEKIA---PDAQLQEYGGYSECLTGLENGVI 203 Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV-- 249 DA T D S L + + + +S + +G ++ + ++ MV Sbjct: 204 DALTTDDSILAGYASQDQFKGKFKLGGFKLSNENYGIGVQKG-SDLKDKINTALEKMVAD 262 Query: 250 ----TAEELGITQKNIN 262 A E N Sbjct: 263 GSWDKAVEKNFGPANYQ 279 >gi|218699516|ref|YP_002407145.1| cystine transporter subunit [Escherichia coli IAI39] gi|218369502|emb|CAR17269.1| cystine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli IAI39] Length = 266 Score = 146 bits (369), Expect = 5e-33, Method: Composition-based stats. Identities = 48/266 (18%), Positives = 87/266 (32%), Gaps = 15/266 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V + L+ +L +K+RG L G+ F+ +G GF+V+F + Sbjct: 14 VMAVALVAGMSVKSFAEEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 73 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + + S P +L SK+ID++ + R+ G Sbjct: 74 LAKHLGVEAS---LKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDF--STPYTISG 128 Query: 127 QGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K I + L G + V GT ++ + + ++ Sbjct: 129 IQALVKKGNEGTIKTADDLKGKKVGVGLGT----NYEEWLRQNVQGVDVRTYDDDPTKYQ 184 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 R R DA D L AL L + + S+ A+ +G+ + V+ Sbjct: 185 DLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDA 242 Query: 245 HYAMVTAEELGITQKNINQVSKDTTN 270 M L + D T Sbjct: 243 IAEMQKDGTLQALSE--KWFGADVTK 266 >gi|28872292|ref|NP_794911.1| cystine ABC transporter periplasmic cystine binding protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213969395|ref|ZP_03397532.1| cystine ABC transporter, periplasmic cystine binding protein [Pseudomonas syringae pv. tomato T1] gi|301386654|ref|ZP_07235072.1| cystine transporter subunit [Pseudomonas syringae pv. tomato Max13] gi|302061131|ref|ZP_07252672.1| cystine transporter subunit [Pseudomonas syringae pv. tomato K40] gi|302132933|ref|ZP_07258923.1| cystine transporter subunit [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28855546|gb|AAO58606.1| cystine ABC transporter, periplasmic cystine binding protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213925766|gb|EEB59324.1| cystine ABC transporter, periplasmic cystine binding protein [Pseudomonas syringae pv. tomato T1] gi|331016086|gb|EGH96142.1| cystine transporter subunit [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 268 Score = 146 bits (369), Expect = 5e-33, Method: Composition-based stats. Identities = 61/263 (23%), Positives = 92/263 (34%), Gaps = 11/263 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + F S L L++ + A L IK G L G+ F+ V NG GF+ Sbjct: 7 RRTFLFSALGLMLGTGIAGQAMAGEQLQKIKDSGTLNVGLEGTYPPFSFVDENGKLSGFE 66 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F AL+ + K + P AL SK++D++ + R+ + P Sbjct: 67 VEFSEALAKELG---VKARIQPSKWDGILAALDSKRLDVVINQVTISDERKKKYDFSE-P 122 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 T Q ++ K I S + LSG + V GT E L KA+ +E Sbjct: 123 YTISGIQALVLKKNADTIKSANDLSGKKVGVGLGTNYEQWL----KANVPGAEIKTYEDD 178 Query: 180 EEIDAAYRAHRCDAYTGDI-SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R DA D +AL T D E S+ A+ +G+ E Sbjct: 179 PTKIQDLSVGRIDAILVDRLAALEIAAKTKDTKRELAPAGAAFSRQESGIALRKGEPELL 238 Query: 239 NIVSWTHYAMVTAEELGITQKNI 261 + + L K Sbjct: 239 AAIDKAIDKLRADGTLEKLSKKY 261 >gi|209518287|ref|ZP_03267113.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] gi|209501307|gb|EEA01337.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] Length = 286 Score = 146 bits (369), Expect = 5e-33, Method: Composition-based stats. Identities = 52/271 (19%), Positives = 93/271 (34%), Gaps = 19/271 (7%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVD 62 +I+ L S + L I R + G+ F + +G +VD Sbjct: 16 SLLTAIVTSFALAAISPAYADQTLDKINARHEIAVGVMISGSPFGSLDPQTQQPRGMNVD 75 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + + K+Q + + R LQ ++DIL N ++ R L P Sbjct: 76 LANDIGKRLG---VKVQLVSVQPSTRVQFLQQGKVDILIANMEYNAQR--GEILDHVPTP 130 Query: 123 YF-DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y+ G I K GI+ L G +C+ G++ + + + A P F + Sbjct: 131 YYRVGGTAITPKSSGITKWEDLRGKPVCISQGSSYIRPVVEKYGA-----VPRAFPGAPQ 185 Query: 182 IDAAYRAHRCDAYTGD-ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A R C A D LY L+ + ++ L + +P + QG+ + Sbjct: 186 SLLALRGGSCVAAVHDAAPLLYPLQQHDPEWRDYRTLQPELEPAPSVIWVRQGEKDTAAK 245 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + L I+ +K++ P Sbjct: 246 LDAIVRDWHRTGWL------IDDEAKNSLTP 270 >gi|167836761|ref|ZP_02463644.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia thailandensis MSMB43] Length = 264 Score = 146 bits (369), Expect = 5e-33, Method: Composition-based stats. Identities = 57/274 (20%), Positives = 104/274 (37%), Gaps = 20/274 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + K ++ + T+ + A +L ++K+RG L+ G+ F G+ GFD Sbjct: 6 LKKLLVAGLIGASFVAATAHA--ADLLDEVKQRGTLRIGLEGTFPPFNSKNPQGELVGFD 63 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A+++ + P +++ LQ+ + D++ T R+ +L P Sbjct: 64 VDIAKAVAAKLGVKP---EFVTTEWSGIIAGLQAGKFDVIVNQVGITDQRKQTLDF--SP 118 Query: 121 ITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 F I K +S+ L G + V G T + +A ++K +P Sbjct: 119 AYTFSSAQLIQRKDDTRQFTSLEDLKGKKLGVALG-TNYMDMAKSVPGVDVKTYPGA--- 174 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E A R DA D L L + P ++ S +P +G+ ++ Sbjct: 175 -PEYLRDLAAGRLDAALNDRLMLAYLTKNSQLP--LRPGANVGSANPSGIPFKKGNPKFA 231 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSK-DTTNP 271 ++ AM E G K ++ D T P Sbjct: 232 KAIAD---AMTQLEADGTFTKISDKWFGIDVTKP 262 >gi|91778422|ref|YP_553630.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia xenovorans LB400] gi|91691082|gb|ABE34280.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia xenovorans LB400] Length = 274 Score = 146 bits (369), Expect = 5e-33, Method: Composition-based stats. Identities = 44/258 (17%), Positives = 92/258 (35%), Gaps = 16/258 (6%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 ++ L L + +A L I K G ++ G+ F + + G+D+D Sbjct: 22 LAFTGLGALCALPSAAHADALDTIAKSGTVRIGVFEDYPPFGSIGPDMKPMGYDIDVANL 81 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 + A+ +K++ +P+ R L + D+L + T RE + + Y+ Sbjct: 82 IGKAL---NAKVELVPVTGDNRMAYLADHKADMLL-SVGQTPEREKVIDFSQPYAPYY-- 135 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 K + + + L+G SI V GT +L++ + F+ +A+ Sbjct: 136 LAVFGPKALPVKNAADLAGKSISVARGTLEDLSVTKIAP---PTANIKRFDDPNGAISAF 192 Query: 187 RAHRCDAYT--GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + + D+ A + + P + + SP + + + V T Sbjct: 193 LSGQVQLMVVGNDVGATILARHPANDPEQ----KFSLFSSPDHVGLNKNEPRLKQKVDET 248 Query: 245 HYAMVTAEELG-ITQKNI 261 + I+QK + Sbjct: 249 IARARKDGTMNAISQKWL 266 >gi|170740012|ref|YP_001768667.1| extracellular solute-binding protein [Methylobacterium sp. 4-46] gi|168194286|gb|ACA16233.1| extracellular solute-binding protein family 3 [Methylobacterium sp. 4-46] Length = 273 Score = 146 bits (369), Expect = 5e-33, Method: Composition-based stats. Identities = 44/242 (18%), Positives = 84/242 (34%), Gaps = 11/242 (4%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 A+ +IK RG L G+ T F A+ G+DVD R + ++ + + Sbjct: 29 PAEAATPDEIKARGKLVVGVLTDYPPFGGTDADQKPAGYDVDVARLFAKSLGVE---LDL 85 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +P+ R L + ++D+L T R + + T + K +S Sbjct: 86 VPVTGPNRIPYLLTNKVDMLIATFGITAERSKQVLFSNPYSTLSTY--VLGPKSLAVSKP 143 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L G +I V +T + ++ + F+ A + + + + Sbjct: 144 EDLKGVTIGVARASTQDTAVSAVAP---PGTRIMRFDDDATTTQAIISGQVQSIGASNTV 200 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQK 259 L +LT D S + + + A + DT + + + EL I Q+ Sbjct: 201 LA--QLTKDYASLGIEPKFNLREQANGMAFRKADTALRDRANAFIAEIAGNGELSAINQR 258 Query: 260 NI 261 Sbjct: 259 WF 260 >gi|260769397|ref|ZP_05878330.1| hypothetical protein VFA_002455 [Vibrio furnissii CIP 102972] gi|260614735|gb|EEX39921.1| hypothetical protein VFA_002455 [Vibrio furnissii CIP 102972] gi|315181928|gb|ADT88841.1| hypothetical binding protein component ofABC transporter [Vibrio furnissii NCTC 11218] Length = 269 Score = 146 bits (369), Expect = 5e-33, Method: Composition-based stats. Identities = 45/271 (16%), Positives = 91/271 (33%), Gaps = 18/271 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + +L + S L ++ G LK + G + F +G + GFD Sbjct: 5 MKSTAAGLAVACSLLGANQAMASESALENVLNTGELKVCFDAGYMPFEMKTKDGRYIGFD 64 Query: 61 VDFCRALSSAIFDDPSKIQYLPLN--AKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 +D + ++ ++ +++ P+N A+ + + DI+ T R + + A Sbjct: 65 IDLGKHMARSMG-----VKFTPVNTAWDGIIPAMLTGKCDIIMGGMTVTAERNLKVNFAT 119 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVF 176 I + + S L+ +I + GTT Y ++ Sbjct: 120 PYIVIGQSVVLSPKLEGKVKSYKDLNDPKYTIATKLGTTGVEAAKKYVPNA----KLDLY 175 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + + DA+ D Y + + V L + + PL AI Q D Sbjct: 176 DTEVDAVLQVVNGKADAFVYDFP--YNAIYSAQNEGKVVHLAEPFTYEPLGWAIRQNDPN 233 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 + N + + G + ++ K Sbjct: 234 FLNFLDNYLRQIKG---DGTYDRVYDKWFKS 261 >gi|222080929|ref|YP_002540292.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221725608|gb|ACM28697.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 269 Score = 146 bits (369), Expect = 5e-33, Method: Composition-based stats. Identities = 46/265 (17%), Positives = 88/265 (33%), Gaps = 15/265 (5%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 + L T+ + A L +I + GIN L + +GFDVD Sbjct: 5 KTVCMLAGAACLALTAVAAEAHSLDEILSAKKIVVGINPNLPPLGRFNDKNEIEGFDVDV 64 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 + L + + + + +++ +R L + + DI+ T R + + Sbjct: 65 AKKLGEMLGVE---VSLVQVSSADRVPFLATGKADIVLGALTRTADRAKVIDFSL--PIQ 119 Query: 124 FDGQGFIMHKKKGISSVSQLSGASI--CVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + ++ K K ++ L+ A + GTT + D +F+ + Sbjct: 120 TEAISALVAKDKPYQTMDDLNSADVHLVEVRGTTPVDFVKDRLPKAQ----VTLFDNYPD 175 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A+ R DA D+ N VI S + QG+T + Sbjct: 176 AVRAFEQGRGDAIV-DVVDYLGAYTKNYSAETRVITDKSASIDYDCIGLAQGNTALKS-- 232 Query: 242 SWTHYAMVTAEELGITQKNINQVSK 266 W + A+ + G ++ Q Sbjct: 233 -WVNVALYQLQTNGFMKQTYKQWFG 256 >gi|168777344|ref|ZP_02802351.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4196] gi|187767379|gb|EDU31223.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4196] Length = 266 Score = 146 bits (369), Expect = 5e-33, Method: Composition-based stats. Identities = 48/272 (17%), Positives = 93/272 (34%), Gaps = 17/272 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + ++ + ++ S + A +L +K+RG L G+ F+ +G GF+ Sbjct: 8 RQALMGVMAVALIARMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFE 67 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F + L+ + + S P +L SK+ID++ + R+ Sbjct: 68 VEFAQQLAKHLGVEAS---LKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDF--ST 122 Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G ++ K I + L G + V GT ++ + + ++ Sbjct: 123 PYTISGIQALVKKGNEGTIKTADDLKGKKVGVGLGT----NYEEWLRQNVQGVDVRTYDD 178 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R R DA D L AL L + + S+ A+ +G+ + Sbjct: 179 DPTKYQDLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLL 236 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 V+ M L + D T Sbjct: 237 KAVNDAIAEMQKDGTLQALSE--KWFGADVTK 266 >gi|300904807|ref|ZP_07122634.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 84-1] gi|301305261|ref|ZP_07211358.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 124-1] gi|300403275|gb|EFJ86813.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 84-1] gi|300839467|gb|EFK67227.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 124-1] gi|315257249|gb|EFU37217.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 85-1] Length = 266 Score = 146 bits (369), Expect = 5e-33, Method: Composition-based stats. Identities = 48/266 (18%), Positives = 90/266 (33%), Gaps = 15/266 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V ++ L+ + +L +K+RG L G+ F+ +G GF+V+F + Sbjct: 14 VMVVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 73 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + + S P +L SK+ID++ + R+ G Sbjct: 74 LAKHLGVEAS---LKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDF--STPYTISG 128 Query: 127 QGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K I + + L G + V GT ++ + + ++ Sbjct: 129 IQALVKKGNEGTIKTAADLKGKKVGVGLGT----NYEEWLRQNVQGVDVRTYDDDPTKYQ 184 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 R R DA D L AL L + + S+ A+ +G+ + V+ Sbjct: 185 DLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDA 242 Query: 245 HYAMVTAEELGITQKNINQVSKDTTN 270 M L + D T Sbjct: 243 IAEMQKDGTLQALSE--KWFGADVTK 266 >gi|170738481|ref|YP_001767136.1| extracellular solute-binding protein [Methylobacterium sp. 4-46] gi|168192755|gb|ACA14702.1| extracellular solute-binding protein family 3 [Methylobacterium sp. 4-46] Length = 272 Score = 146 bits (369), Expect = 5e-33, Method: Composition-based stats. Identities = 55/281 (19%), Positives = 107/281 (38%), Gaps = 20/281 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + L + L S + A + IK+RG L G+ F +G+ G + Sbjct: 1 MRQKVRALALAGVALATLSGARAAEGVDAIKQRGKLIVGVKADYRPFGFRDPSGNIIGLE 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D ++ + + ++ +P+ + R LQ ++D+L R + A P Sbjct: 61 PDLAADIAKRLGVE---LELVPVVSSNRIEFLQQGKVDLLIATISDKPERRRVVQ-AIDP 116 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y D ++ KK GI+ QL G +C +G +A + A + F+ E Sbjct: 117 QYYSDYVNILLPKKGGITEWGQLKGKPVCATSGAWYNKDVARTYGA-----EIVAFDGSE 171 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A + C Y D + + ++ +++ + I ++P A+ G+ + Sbjct: 172 KPLFALKQGNCVGYLYDQTFIQGRLGEDEWKADYAMPLKGILEAPWIMAVASGNASLQAV 231 Query: 241 V-----SWTHYAMVTAEE--LGI----TQKNINQVSKDTTN 270 + W + EE GI + ++ K+ TN Sbjct: 232 METATKDWMRTGFIVDEEKKWGIAPTDYARAMHDKYKNATN 272 >gi|170719627|ref|YP_001747315.1| extracellular solute-binding protein [Pseudomonas putida W619] gi|169757630|gb|ACA70946.1| extracellular solute-binding protein family 3 [Pseudomonas putida W619] Length = 266 Score = 146 bits (369), Expect = 5e-33, Method: Composition-based stats. Identities = 51/273 (18%), Positives = 102/273 (37%), Gaps = 17/273 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + +L + S A + D KRG L+ G++ + F G+ GF+ Sbjct: 1 MMKKYLSRLLVGVTALVAVASAQAGAIDDAVKRGTLRVGMDPTYMPFQMTNKRGEIIGFE 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A++ ++ K++ + AL + + D++ T R L L F Sbjct: 61 VDILKAMAKSMG---VKLETVSTAYDGIIPALLTDKFDMIGSGMTLTQERN--LRLNFSE 115 Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVF 176 GQ ++ K I S L+ I + GTT E+ + Sbjct: 116 PFIVVGQTLLIRKDLAGEIKSYKDLNNEKYRITSKLGTTGEMVAKKLIAKATY----HGY 171 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + +E + DA+ D + + + + L + + PLA + +GD Sbjct: 172 DNEQEAVMDVVNGKADAFVYDAP-YNVVAVDKAGAGKLLFLEEPFTYEPLAFGLKKGD-- 228 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 Y+ +++ + + + G + ++ K+ Sbjct: 229 -YDSINFINNFLHQIKHDGTYDRIHDKWFKNKD 260 >gi|82543612|ref|YP_407559.1| cystine transporter subunit [Shigella boydii Sb227] gi|110805893|ref|YP_689413.1| cystine transporter subunit [Shigella flexneri 5 str. 8401] gi|187732594|ref|YP_001879709.1| cystine transporter subunit [Shigella boydii CDC 3083-94] gi|188491699|ref|ZP_02998969.1| cystine-binding periplasmic protein [Escherichia coli 53638] gi|191168309|ref|ZP_03030102.1| cystine-binding periplasmic protein [Escherichia coli B7A] gi|193066396|ref|ZP_03047444.1| cystine-binding periplasmic protein [Escherichia coli E22] gi|193071146|ref|ZP_03052070.1| cystine-binding periplasmic protein [Escherichia coli E110019] gi|194429921|ref|ZP_03062431.1| cystine-binding periplasmic protein [Escherichia coli B171] gi|194439567|ref|ZP_03071640.1| cystine-binding periplasmic protein [Escherichia coli 101-1] gi|218554504|ref|YP_002387417.1| cystine transporter subunit [Escherichia coli IAI1] gi|218705415|ref|YP_002412934.1| cystine transporter subunit [Escherichia coli UMN026] gi|260844324|ref|YP_003222102.1| putative periplasmic binding transport protein FliY [Escherichia coli O103:H2 str. 12009] gi|293405406|ref|ZP_06649398.1| cystine transporter subunit [Escherichia coli FVEC1412] gi|293410279|ref|ZP_06653855.1| cystine transporter subunit [Escherichia coli B354] gi|293415231|ref|ZP_06657874.1| cystine transporter subunit [Escherichia coli B185] gi|293446302|ref|ZP_06662724.1| cystine transporter subunit [Escherichia coli B088] gi|298381050|ref|ZP_06990649.1| cystine transporter subunit [Escherichia coli FVEC1302] gi|300818656|ref|ZP_07098864.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 107-1] gi|300899174|ref|ZP_07117452.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 198-1] gi|300917362|ref|ZP_07134031.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 115-1] gi|300925013|ref|ZP_07140936.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 182-1] gi|300951544|ref|ZP_07165378.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 116-1] gi|300956564|ref|ZP_07168845.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 175-1] gi|301327710|ref|ZP_07220916.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 78-1] gi|301645561|ref|ZP_07245491.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 146-1] gi|307138587|ref|ZP_07497943.1| cystine transporter subunit [Escherichia coli H736] gi|309795970|ref|ZP_07690383.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 145-7] gi|81245023|gb|ABB65731.1| putative periplasmic binding transport protein [Shigella boydii Sb227] gi|110615441|gb|ABF04108.1| putative periplasmic binding transport protein [Shigella flexneri 5 str. 8401] gi|187429586|gb|ACD08860.1| cystine-binding periplasmic protein [Shigella boydii CDC 3083-94] gi|188486898|gb|EDU62001.1| cystine-binding periplasmic protein [Escherichia coli 53638] gi|190901681|gb|EDV61437.1| cystine-binding periplasmic protein [Escherichia coli B7A] gi|192925981|gb|EDV80627.1| cystine-binding periplasmic protein [Escherichia coli E22] gi|192955541|gb|EDV86020.1| cystine-binding periplasmic protein [Escherichia coli E110019] gi|194412010|gb|EDX28322.1| cystine-binding periplasmic protein [Escherichia coli B171] gi|194421476|gb|EDX37490.1| cystine-binding periplasmic protein [Escherichia coli 101-1] gi|218361272|emb|CAQ98856.1| cystine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli IAI1] gi|218432512|emb|CAR13405.1| cystine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli UMN026] gi|222033661|emb|CAP76402.1| Cystine-binding periplasmic protein [Escherichia coli LF82] gi|257759471|dbj|BAI30968.1| putative periplasmic binding transport protein FliY [Escherichia coli O103:H2 str. 12009] gi|291323132|gb|EFE62560.1| cystine transporter subunit [Escherichia coli B088] gi|291427614|gb|EFF00641.1| cystine transporter subunit [Escherichia coli FVEC1412] gi|291432879|gb|EFF05858.1| cystine transporter subunit [Escherichia coli B185] gi|291470747|gb|EFF13231.1| cystine transporter subunit [Escherichia coli B354] gi|298278492|gb|EFI20006.1| cystine transporter subunit [Escherichia coli FVEC1302] gi|300316627|gb|EFJ66411.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 175-1] gi|300357211|gb|EFJ73081.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 198-1] gi|300415408|gb|EFJ98718.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 115-1] gi|300418832|gb|EFK02143.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 182-1] gi|300449219|gb|EFK12839.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 116-1] gi|300528828|gb|EFK49890.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 107-1] gi|300845754|gb|EFK73514.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 78-1] gi|301076170|gb|EFK90976.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 146-1] gi|308120420|gb|EFO57682.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 145-7] gi|320176076|gb|EFW51144.1| Cystine ABC transporter, periplasmic cystine-binding protein FliY [Shigella dysenteriae CDC 74-1112] gi|320184749|gb|EFW59541.1| Cystine ABC transporter, periplasmic cystine-binding protein FliY [Shigella flexneri CDC 796-83] gi|323158596|gb|EFZ44610.1| cystine-binding periplasmic protein [Escherichia coli E128010] gi|323174566|gb|EFZ60187.1| cystine-binding periplasmic protein [Escherichia coli LT-68] gi|323378203|gb|ADX50471.1| extracellular solute-binding protein family 3 [Escherichia coli KO11] gi|323940417|gb|EGB36608.1| extracellular solute-binding protein 3 [Escherichia coli E482] gi|323948199|gb|EGB44187.1| bacterial extracellular solute-binding protein 3 [Escherichia coli H120] gi|323961969|gb|EGB57568.1| extracellular solute-binding protein 3 [Escherichia coli H489] gi|323972717|gb|EGB67918.1| extracellular solute-binding protein 3 [Escherichia coli TA007] gi|324118974|gb|EGC12863.1| extracellular solute-binding protein 3 [Escherichia coli E1167] gi|332089654|gb|EGI94756.1| cystine-binding periplasmic protein [Shigella boydii 5216-82] gi|332096708|gb|EGJ01699.1| cystine-binding periplasmic protein [Shigella boydii 3594-74] Length = 266 Score = 146 bits (369), Expect = 5e-33, Method: Composition-based stats. Identities = 48/272 (17%), Positives = 94/272 (34%), Gaps = 17/272 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + ++ + ++ S + A +L +K+RG L G+ F+ +G GF+ Sbjct: 8 RQALMGVMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFE 67 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F + L+ + + S P +L SK+ID++ + R+ Sbjct: 68 VEFAQQLAKHLGVEAS---LKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDF--ST 122 Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G ++ K I + + L G + V GT ++ + + ++ Sbjct: 123 PYTISGIQALVKKGNEGTIKTAADLKGKKVGVGLGT----NYEEWLRQNVQGVDVRTYDD 178 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R R DA D L AL L + + S+ A+ +G+ + Sbjct: 179 DPTKYQDLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLL 236 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 V+ M L + D T Sbjct: 237 KAVNDAIAEMQKDGTLQALSE--KWFGADVTK 266 >gi|182435530|ref|YP_001823249.1| putative glutamate ABC transporter substrate-binding protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326776167|ref|ZP_08235432.1| ABC-type transporter, periplasmic subunit family 3 [Streptomyces cf. griseus XylebKG-1] gi|178464046|dbj|BAG18566.1| putative glutamate ABC transporter substrate-binding protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326656500|gb|EGE41346.1| ABC-type transporter, periplasmic subunit family 3 [Streptomyces cf. griseus XylebKG-1] Length = 307 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 45/274 (16%), Positives = 90/274 (32%), Gaps = 23/274 (8%) Query: 15 LFFTSFSTNASILG-----DIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALS 68 T + L K+RG L G A + GFD++ + ++ Sbjct: 45 ALPTYTAAKDVTLDSPVFKKAKERGKLVIGAKADQPYLGFEDQATKERSGFDIEIAKMIA 104 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 + + +I++ +++ R A+ Q+D R+ +G A Y G Sbjct: 105 ADLGFSDKQIEWKTVDSGVRETAISKGQVDYYVGTYTINDERKKQVGFA--GPYYKAGAD 162 Query: 129 FIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 ++ K K I+ + G +C G+T + K + + + Sbjct: 163 LLVRKDDKSITGKDSVKGKKVCSIVGSTPLQEI----KKPEYGASVVELAKYSDCVQQLL 218 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 + DA T D S L N + ++ D + P + + D +S + Sbjct: 219 TKQVDAVTTDDSILKGYAAANS--GKLHVVGDPFTDEPYGVGLNKDDKVLREAISKSLEE 276 Query: 248 MVTAEELGITQKNINQVSKDT-----TNPDVQRF 276 V + G +K + P ++R+ Sbjct: 277 RV---KDGTYKKIYEATLGLSGSDYVEPPAIERY 307 >gi|157371176|ref|YP_001479165.1| cystine transporter subunit [Serratia proteamaculans 568] gi|157322940|gb|ABV42037.1| extracellular solute-binding protein family 3 [Serratia proteamaculans 568] Length = 265 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 50/269 (18%), Positives = 92/269 (34%), Gaps = 18/269 (6%) Query: 2 YKDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + + ++ + + S T A+ +L +K G L G+ F+ +G GF Sbjct: 6 RRQLLLGVMSVALTAGLSTQTYAADNLLEQVKHHGTLVVGLEGTYPPFSFQGEDGKLTGF 65 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 +VDF AL+ + K + P +L SK+ID++ + R+ Sbjct: 66 EVDFANALAQHLG---VKAKLNPTKWDGMLASLDSKRIDVVINQVTISPERQKKYDF--S 120 Query: 120 PITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 G ++ K I+ L G + V GT E L D + ++ Sbjct: 121 TPYTVSGIQALVKKGNEGTITKPEDLKGKKVGVGLGTNYEQWLRD----NVQGVDVRTYD 176 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 R R +A D L AL L + S+ A+ + + E Sbjct: 177 DDPTKYQDLRVGRINAILVDR--LAALDLVKKTGDTLAVAGPAFSRQESGVAVRKNNPEL 234 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSK 266 ++ A+ ++ G K ++ Sbjct: 235 LAAIN---QAIADMQKDGTLAKISDKWFG 260 >gi|170019742|ref|YP_001724696.1| cystine transporter subunit [Escherichia coli ATCC 8739] gi|209919342|ref|YP_002293426.1| cystine transporter subunit [Escherichia coli SE11] gi|307314173|ref|ZP_07593783.1| extracellular solute-binding protein family 3 [Escherichia coli W] gi|331642542|ref|ZP_08343677.1| cystine ABC transporter, cystine-binding periplasmic protein [Escherichia coli H736] gi|331653328|ref|ZP_08354333.1| cystine ABC transporter, cystine-binding periplasmic protein [Escherichia coli M718] gi|331677805|ref|ZP_08378480.1| cystine ABC transporter, cystine-binding periplasmic protein [Escherichia coli H591] gi|169754670|gb|ACA77369.1| extracellular solute-binding protein family 3 [Escherichia coli ATCC 8739] gi|209912601|dbj|BAG77675.1| cystine-binding periplasmic protein precursor [Escherichia coli SE11] gi|306906142|gb|EFN36660.1| extracellular solute-binding protein family 3 [Escherichia coli W] gi|312946512|gb|ADR27339.1| cystine transporter subunit [Escherichia coli O83:H1 str. NRG 857C] gi|315061220|gb|ADT75547.1| cystine transporter subunit [Escherichia coli W] gi|331039340|gb|EGI11560.1| cystine ABC transporter, cystine-binding periplasmic protein [Escherichia coli H736] gi|331049426|gb|EGI21498.1| cystine ABC transporter, cystine-binding periplasmic protein [Escherichia coli M718] gi|331074265|gb|EGI45585.1| cystine ABC transporter, cystine-binding periplasmic protein [Escherichia coli H591] Length = 285 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 48/272 (17%), Positives = 94/272 (34%), Gaps = 17/272 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + ++ + ++ S + A +L +K+RG L G+ F+ +G GF+ Sbjct: 27 RQALMGVMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFE 86 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F + L+ + + S P +L SK+ID++ + R+ Sbjct: 87 VEFAQQLAKHLGVEAS---LKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDF--ST 141 Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G ++ K I + + L G + V GT ++ + + ++ Sbjct: 142 PYTISGIQALVKKGNEGTIKTAADLKGKKVGVGLGT----NYEEWLRQNVQGVDVRTYDD 197 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R R DA D L AL L + + S+ A+ +G+ + Sbjct: 198 DPTKYQDLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLL 255 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 V+ M L + D T Sbjct: 256 KAVNDAIAEMQKDGTLQALSE--KWFGADVTK 285 >gi|256784799|ref|ZP_05523230.1| glutamate binding protein [Streptomyces lividans TK24] gi|289768687|ref|ZP_06528065.1| glutamate binding protein [Streptomyces lividans TK24] gi|289698886|gb|EFD66315.1| glutamate binding protein [Streptomyces lividans TK24] Length = 278 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 38/235 (16%), Positives = 74/235 (31%), Gaps = 14/235 (5%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 + GI G + +G + GFDVD ++ + +I++ + +R LQ Sbjct: 39 KITIGIKFDQPGLGQKTPDG-YAGFDVDVATYVAKKLGYTEDQIEWKESKSADRETMLQR 97 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAG 153 +D ++ T R + A Q ++ I S L+ A +C G Sbjct: 98 GDVDFIAATYSITPERSEKVDFA--GPYLLAHQDVLIRADDDKIKSPEDLNDAKLCSVTG 155 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 +T+ + D K + + DA T D S L + + Sbjct: 156 STSAQNVKD---KLAPKAQLQKYPTYSACLNGLQTGAIDALTTDDSILAGYAAQSQFKGK 212 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY------AMVTAEELGITQKNIN 262 + ++ + +G ++ ++ A A E N Sbjct: 213 FKLGGFKMTNENYGIGVKKG-SDLKAKINDALEAMATDGAWDKAVEDNFGPANYK 266 >gi|157161392|ref|YP_001458710.1| cystine transporter subunit [Escherichia coli HS] gi|157067072|gb|ABV06327.1| cystine-binding periplasmic protein [Escherichia coli HS] Length = 266 Score = 146 bits (368), Expect = 6e-33, Method: Composition-based stats. Identities = 48/272 (17%), Positives = 95/272 (34%), Gaps = 17/272 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + +S++ + ++ S + A +L +K+RG L G+ F+ +G GF+ Sbjct: 8 RQALMSVMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFE 67 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F + L+ + + S P +L SK+ID++ + R+ Sbjct: 68 VEFAQQLAKHLGVEAS---LKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDF--ST 122 Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G ++ K + + + L G + V GT ++ + + ++ Sbjct: 123 PYTISGIQALVKKGNEGTLKTAADLKGKKVGVGLGT----NYEEWLRQNVQGVDVRTYDD 178 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R R DA D L AL L + + S+ A+ +G+ + Sbjct: 179 DPTKYQDLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLL 236 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 V+ M L + D T Sbjct: 237 KAVNDAIAEMQKDGTLQALSE--KWFGADVTK 266 >gi|225023167|ref|ZP_03712359.1| hypothetical protein EIKCOROL_00019 [Eikenella corrodens ATCC 23834] gi|224943991|gb|EEG25200.1| hypothetical protein EIKCOROL_00019 [Eikenella corrodens ATCC 23834] Length = 276 Score = 146 bits (368), Expect = 6e-33, Method: Composition-based stats. Identities = 51/274 (18%), Positives = 91/274 (33%), Gaps = 20/274 (7%) Query: 1 MYKDFFVSILCLIILFF----TSFSTNASILGDIKKRG--------FLKCGINTGLVGFA 48 M K ++ C I + + AS D G L+ N F Sbjct: 3 MKKWLATALACSAIALSGCGNSGGTQQASQPADANASGASAPSSEKVLRVATNAEFAPFE 62 Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 +G GFD+D AL+ ++++ + F +L++ D++ T Sbjct: 63 SKNPDGSLSGFDIDLINALAKEAGY---RVEFKDQSWDSLFNSLRNGDADVVVAAVTITP 119 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTELTLADYFKAH 167 R+ S+ + Q + + K ++SV L + V G T +L + A Sbjct: 120 ERQQSMLF--TDPYFEITQVVAVPEGKQVASVEDLKNLNRVGVVTGNTGDLAASKLLGAT 177 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 N K FE + + + DA D S + N +I Sbjct: 178 NPKVT--RFESLPLLLKELQNGGVDAAVSDSSVVMEFIKHNGDKGFTMIKVPDFEAEHYG 235 Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 A+ Q DTE + ++ A+ + E + Sbjct: 236 IALRQDDTELRDTLNKALAAIKASGEYDRIHQQY 269 >gi|172041410|ref|YP_001801124.1| putative extracellular solute-binding protein [Corynebacterium urealyticum DSM 7109] gi|171852714|emb|CAQ05690.1| putative extracellular solute-binding protein [Corynebacterium urealyticum DSM 7109] Length = 382 Score = 146 bits (368), Expect = 6e-33, Method: Composition-based stats. Identities = 45/220 (20%), Positives = 85/220 (38%), Gaps = 12/220 (5%) Query: 12 LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSA 70 L L T+ S ++ +I KRG L G+ L + D GF+VD R ++ Sbjct: 76 LGSLAPTAASVQENV-PNISKRGRLIVGVAQSLYRLGYRDSESSDLIGFEVDLAREIARD 134 Query: 71 IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130 IF DP K+++ + ++ R AL++ +D++ R T R+ L F + + Sbjct: 135 IFGDPDKVEFRYVESRHREEALRTGDVDLVLRTMTTT--RKRQKALEFSIPYLHVQERLL 192 Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190 K GI SV+ L ++C ++ + + A + + Sbjct: 193 TQKGSGIESVADLKHKTVCA-----SQDFPPGMVADLLHPKRILQTRTWTDCLMAMQQGQ 247 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 DA D + L L + + ++ + + A+ Sbjct: 248 VDAIYSDDAVLSGLAAQDP---DTQLIGASLGEGYYGVAM 284 >gi|116873171|ref|YP_849952.1| amino acid ABC transporter, amino acid-binding protein [Listeria welshimeri serovar 6b str. SLCC5334] gi|116742049|emb|CAK21173.1| amino acid ABC transporter, amino acid-binding protein [Listeria welshimeri serovar 6b str. SLCC5334] Length = 271 Score = 146 bits (368), Expect = 6e-33, Method: Composition-based stats. Identities = 41/273 (15%), Positives = 95/273 (34%), Gaps = 14/273 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILG---DIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K ++++ +++L + S + S IKK + G++ V + + Sbjct: 1 MKKGLLITVMVVVMLALGACSGSESKEDQWNRIKKDKEVVIGLDDSFVPMGFRDKDDNLV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D +A+ + K ++ P++ + L++ ID++ T R+ + Sbjct: 61 GFDIDLAKAVFAEYG---IKAKFTPIDWTMKESELKNGSIDLIWNGYTVTDARKKQVAF- 116 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPI 174 + Q + K I+ S + ++ Q G ++ +A + P Sbjct: 117 -SKPYMKNEQVLVTLKSSKINKFSDMKDKTLGAQNGASSIDDMAKKPEVLTDIISNNEPE 175 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +++ + R D D ++ I+ + A + + D Sbjct: 176 LYDTFDTAFIDLNNKRIDGLIIDEVYARYYIDKQKNKDDYNIITGGFDPTDFAVGMRKSD 235 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 E + + A + G Q+ + D Sbjct: 236 KELQ---TKINKAFEKLYKEGKMQEISKKWFGD 265 >gi|116049212|ref|YP_791985.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa UCBPP-PA14] gi|115584433|gb|ABJ10448.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa UCBPP-PA14] Length = 273 Score = 146 bits (368), Expect = 6e-33, Method: Composition-based stats. Identities = 51/259 (19%), Positives = 91/259 (35%), Gaps = 7/259 (2%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 + A L DI + G L+C + A + GFDVD+C L+ A+ K Sbjct: 20 AGLVQADKLDDIIESGKLRCAVTLDFPPMGSRDAQNNPVGFDVDYCNDLAKAL---DVKA 76 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + + +R AL S + D++ +T TL R ++G++ + + + GI+ Sbjct: 77 EIVETPFPDRIPALVSGRADVIVASTSDTLERAKTIGMSIPYFAFVKV--VLTREDTGIA 134 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFERVEEIDAAYRAHRCDAYTGD 197 S L G + AGT L L KA K ++ + A DA Sbjct: 135 SYEDLKGRPVGGTAGTFEALALEKDSKAWGDAKGSFRAYQSEADTALAISQGHIDATVVS 194 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-I 256 + + + + +A + + N ++ V + Sbjct: 195 STVAASWIKSGKYKGLKIAGDAPYDIDYVALGAKRNEYGLLNYLNLFINQQVRTGRYAEL 254 Query: 257 TQKNINQVSKDTTNPDVQR 275 QK + + + T V R Sbjct: 255 AQKWVGGTAPELTTSAVYR 273 >gi|227820464|ref|YP_002824435.1| substrate-binding component of ABC transporter [Sinorhizobium fredii NGR234] gi|227339463|gb|ACP23682.1| putative substrate-binding component of ABC transporter [Sinorhizobium fredii NGR234] Length = 267 Score = 146 bits (368), Expect = 6e-33, Method: Composition-based stats. Identities = 48/237 (20%), Positives = 87/237 (36%), Gaps = 10/237 (4%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 ++ A+ L DI RG ++ G+ TG V G+ G+DVD ++ + Sbjct: 23 SAVEAQAATLNDIISRGTVRIGVLTGAPPMGMVDEQGNPTGYDVDVANLIAGYLSLPG-- 80 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 + +PL R ALQ+ ++D L T R ++ + I + Sbjct: 81 -ELVPLTPPARIPALQTGKVDFLVATLAPTGERAKTVMFTQPYSAF--NMDIISGPDQKF 137 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + ++ L G + V G++ E L KA +V+E A A + DA Sbjct: 138 AKLADLEGKRVAVNRGSSQETALR---KAAVPGLEIVVYEDDSTSAQALIAGQVDAVALP 194 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 + + RP + + + + A D E ++ Y M + +L Sbjct: 195 STV--GEAIIKQRPDAGLQVGFTFFQQGNSMATRMEDFEIRQWLNTAIYLMKISGDL 249 >gi|194292630|ref|YP_002008537.1| high affinity periplasmic solute-binding protein; high affinity transport system [Cupriavidus taiwanensis LMG 19424] gi|193226534|emb|CAQ72485.1| high affinity periplasmic solute-binding protein; high affinity transport system [Cupriavidus taiwanensis LMG 19424] Length = 276 Score = 146 bits (368), Expect = 6e-33, Method: Composition-based stats. Identities = 58/268 (21%), Positives = 106/268 (39%), Gaps = 13/268 (4%) Query: 12 LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSA 70 L L + +A L IK+RG + G+ G F + G++ D R L+ Sbjct: 15 LSCLAVNAAWADA-TLDRIKQRGKVSIGVLVGGSLFGSIDPVTQQLVGWNPDLARDLAKR 73 Query: 71 IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130 + + + +P+ R LQ ++D+L + ++ R LG A P G Sbjct: 74 LGVEA---ELVPVQPSNRVQFLQQGKVDLLIASMEYNAERGELLGHAPTPFYRVGGTA-A 129 Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190 + K+ GI+ L G ++C G++ L + + A F+ E A R + Sbjct: 130 VLKRSGIAKWDDLRGKTVCASQGSSYVKPLQEQYGAQ-----VRGFKTSAESLLALRGGQ 184 Query: 191 CDAYTGDISALYALKLTNDRPSEHVI-LPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 C A D + ++ L +N +++ +P I +P +G+T+ V Sbjct: 185 CVAAVHDATLIHPLVRSNADWTDYAAPIPAEILPAPSVVWTRKGETDTIAAVDKIVQEWH 244 Query: 250 TAEELGITQKNINQVSKDTTNPDVQ-RF 276 + L T+K + P++Q RF Sbjct: 245 RSGWLIATEKRLGITPPQPLLPELQARF 272 >gi|322833174|ref|YP_004213201.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602] gi|321168375|gb|ADW74074.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602] Length = 266 Score = 146 bits (368), Expect = 6e-33, Method: Composition-based stats. Identities = 49/266 (18%), Positives = 89/266 (33%), Gaps = 16/266 (6%) Query: 1 MYKDFFVSILC--LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 + + + + L ++ + +L +K RG L G+ F+ +G G Sbjct: 6 LRRRLLLGAVAVTLTAGMVSNTFADEGLLKKVKDRGTLIVGLEGTYPPFSFQGEDGKLTG 65 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 F+V+F AL+ + K + P +L+SK+ID++ + RE Sbjct: 66 FEVEFADALAQHMG---VKAKLQPTKWDGMLASLESKRIDVVINQVTISPEREKKYDF-- 120 Query: 119 RPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 G + K I+ L G + V G+ E L + + + Sbjct: 121 STPYTVSGIQALTKKGQEGTITKPEDLKGKKVGVGLGSNYEQWLRE----NVQGVDIRTY 176 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + R R +A D L AL L + S+ AI + + E Sbjct: 177 DDDPTKYQDLRVGRINAILVDR--LAALDLVKKTGDTLAVAGAPFSRLESGVAIRKDNPE 234 Query: 237 WYNIVSWTHYAMVTAEEL-GITQKNI 261 ++ M L I++K Sbjct: 235 LLAAINKAIAEMQKDGSLAKISEKWF 260 >gi|237731966|ref|ZP_04562447.1| cystine transporter subunit [Citrobacter sp. 30_2] gi|226907505|gb|EEH93423.1| cystine transporter subunit [Citrobacter sp. 30_2] Length = 273 Score = 146 bits (368), Expect = 6e-33, Method: Composition-based stats. Identities = 49/272 (18%), Positives = 91/272 (33%), Gaps = 17/272 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + ++ + ++ S T A +L +K+RG L G+ F+ +G GF+ Sbjct: 15 RQALMGVMAVALVAGMSVKTYADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFE 74 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F L+ + K P +L SK+ID++ + R+ Sbjct: 75 VEFAEELAKHLG---VKANLKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDF--ST 129 Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G ++ K I + + L G + V GT ++ + + ++ Sbjct: 130 PYTVSGIQALVKKGNEGVIKTAADLKGKKVGVGLGT----NYEEWLRQNVQGVDIRTYDD 185 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R R DA D L AL L + + S+ A+ +G+ + Sbjct: 186 DPTKYQDLRVGRIDAILVDR--LAALDLVKKTKDTLAVTGEAFSRQESGVALRKGNEDLL 243 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 V M L + D T Sbjct: 244 KAVDAAIAEMQKDGTLKALSE--KWFGADVTK 273 >gi|261416888|ref|YP_003250571.1| extracellular solute-binding protein family 3 [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373344|gb|ACX76089.1| extracellular solute-binding protein family 3 [Fibrobacter succinogenes subsp. succinogenes S85] gi|302327529|gb|ADL26730.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 263 Score = 146 bits (368), Expect = 6e-33, Method: Composition-based stats. Identities = 41/239 (17%), Positives = 85/239 (35%), Gaps = 9/239 (3%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + +K G G++ + + GFD+D + + + K++ Sbjct: 29 TAADDSFNKVKAAGVFVLGLDDSFPPMGFRDKDNNIVGFDIDLATEVCARLG---IKLKT 85 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 P++ + L + +ID + R + L+ Y + K K I+++ Sbjct: 86 QPISWDAKEQELNTGKIDCIWNGMSVDSDRARVMNLSDA---YLKNRMIFTVKDKAITNL 142 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + L+G I VQ G+T + L + +A + F+ + DA D Sbjct: 143 AALAGKKIAVQNGSTAQKLL-ETSEAGKAAKEIVPFDDNQTALMDLDKGGVDAVFLDEIV 201 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 +TN +P +++L + +S A + D + V+ AM + Sbjct: 202 AKYWIVTNAKP--YIVLEEGLSDEVYAVGFRKKDQALRDSVNNVLDAMKKDGKFAEISA 258 >gi|220928328|ref|YP_002505237.1| extracellular solute-binding protein family 3 [Clostridium cellulolyticum H10] gi|219998656|gb|ACL75257.1| extracellular solute-binding protein family 3 [Clostridium cellulolyticum H10] Length = 284 Score = 146 bits (368), Expect = 6e-33, Method: Composition-based stats. Identities = 46/276 (16%), Positives = 95/276 (34%), Gaps = 16/276 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-------LGDIKKRGFLKCGINTGLVGFAEVKAN 53 M F V+ S T AS +K++G L G++ + Sbjct: 14 MALTFLVAGCGASGDSSKSSGTAASSNIAVDESWDKVKEKGELVMGLDENFPPMGFRDED 73 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 + G+D+D + ++S + K++ P+N + L + ID + R+ + Sbjct: 74 NNIVGYDLDLAKEVASRLG---VKLKVQPINWDSKDQELNTGNIDCIWNGFSINEERKEN 130 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + + Q ++ ++ L G S+ +QA ++ LA + N Sbjct: 131 ILF--SDPYMKNNQVVVVMADSEYNTFGDLKGKSVSLQAQSSASDALAKNAEFKNSLKDV 188 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + + DA D + A ++ +L + ++ +G Sbjct: 189 IELKDNTLCLMDLKTGNTDAVVMD--EVVARYQIQMNSEKYRMLGESLAAEEYGVGFRKG 246 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 D + V+ T M + IT+ + KD + Sbjct: 247 DVKLMTKVNDTLKEMAKDGK--ITEISNKWFGKDIS 280 >gi|56697873|ref|YP_168244.1| polar amino acid ABC transporter periplasmic substrate-binding protein [Ruegeria pomeroyi DSS-3] gi|56679610|gb|AAV96276.1| polar amino acid uptake family ABC transporter, periplasmic substrate-binding protein [Ruegeria pomeroyi DSS-3] Length = 277 Score = 146 bits (368), Expect = 6e-33, Method: Composition-based stats. Identities = 44/237 (18%), Positives = 87/237 (36%), Gaps = 13/237 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILG---DIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M + L + L + + I++RG + G+ + +G Sbjct: 1 MKHLIATTALASLTLAPIAATAAECTNDAWNRIQERGKIVVGVKADYKPWGFRDTDGSII 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G ++D ++ + + ++ P+ A R L+ QID++ R +G+ Sbjct: 61 GMEIDMAAEVAKTLGVE---LELTPVVASNRMQFLEQGQIDLMIATMTDRADRREIVGI- 116 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 P Y G + K G SS ++L+G +C G + D + A + F Sbjct: 117 VGPNYYTSGTNILAPKALGFSSWNELNGKPVCGVQGAFYNQIVEDKYGAQ-----IVAFA 171 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 E A R +C A+ D S++ + + + + SP A+ +G+ Sbjct: 172 GAAEARQALRDKKCVAFVYDDSSI-GSAIASGEWEDFEMPLASEDDSPWGLAVPKGE 227 >gi|317057988|gb|ADU90705.1| putative amino acid transporter periplasmic ligand binding protein [Collimonas sp. MPS11E8] Length = 268 Score = 146 bits (368), Expect = 7e-33, Method: Composition-based stats. Identities = 51/249 (20%), Positives = 95/249 (38%), Gaps = 15/249 (6%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 + + +A L DI+KRG L+ + F V A +G D+D ++ + Sbjct: 20 IAAPAAHADSLSDIQKRGVLRIAVPQDFAPFGSVTAELKLQGLDIDVAGLVAKNMG---L 76 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 K+Q +P+ + R LQ+ + D++ RE + + Y + Sbjct: 77 KLQLVPVTSANRIAYLQTAKADLVISTLGKNAEREKVIAFSQPYSPYNNS--VFGPTAIK 134 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY-T 195 +S + L+G +I V GT + L++ +E + +AY A + T Sbjct: 135 VSGPADLAGKTIGVARGTFQDSQLSETAP---PSATIKRYEDNNGMISAYLAGQVQLVGT 191 Query: 196 GDISALY-ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 GD A+ A K T ++P I+ + +++ + V+ EL Sbjct: 192 GDFVAVALAAKTTGNKPQMKYIIQESACY----VGLLKEEPALMAAVNAALTKAKKDHEL 247 Query: 255 G-ITQKNIN 262 I K +N Sbjct: 248 NTIVMKWLN 256 >gi|239827641|ref|YP_002950265.1| extracellular solute-binding protein family 3 [Geobacillus sp. WCH70] gi|239807934|gb|ACS24999.1| extracellular solute-binding protein family 3 [Geobacillus sp. WCH70] Length = 260 Score = 146 bits (368), Expect = 7e-33, Method: Composition-based stats. Identities = 53/268 (19%), Positives = 104/268 (38%), Gaps = 13/268 (4%) Query: 1 MYKD--FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDW 56 M K FF++ + LI L + G +++ L+ G + F + + Sbjct: 1 MKKSLLFFIASILLIGLLSACGTGGEQKNGSGEQKKVLRMGTSADYAPFEYIDTTKGNEI 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFDVD + ++ + + + + ++ ALQS ++D + T R+ ++ Sbjct: 61 IGFDVDLAKMITKELGYE---FEIVDMDFTGLIPALQSGKVDFVLAGMTPTKERKKNVDF 117 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + Y + K GI +V L G ++ VQ G+ E K +MK Sbjct: 118 --SDVYYVARNMIVSKKGSGIKTVEDLKGKTVGVQTGSIQEGEANKIAKKVDMKIESR-- 173 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 R+ E+ +A R DA + + +++ E +P KS A A +G ++ Sbjct: 174 NRIPELIQEIQAGRFDAAIIEDTVAKGYLDSSNGKLEGHTIPTDKEKSGYAIAFPKG-SK 232 Query: 237 WYNIVSWTHYAMVTAEE-LGITQKNINQ 263 + + + E + +K +Q Sbjct: 233 LRDEFNKVLQEKMKNGEVDKLIKKWFDQ 260 >gi|16803778|ref|NP_465263.1| hypothetical protein lmo1738 [Listeria monocytogenes EGD-e] gi|224503337|ref|ZP_03671644.1| hypothetical protein LmonFR_12625 [Listeria monocytogenes FSL R2-561] gi|284802182|ref|YP_003414047.1| hypothetical protein LM5578_1938 [Listeria monocytogenes 08-5578] gi|284995324|ref|YP_003417092.1| hypothetical protein LM5923_1889 [Listeria monocytogenes 08-5923] gi|16411192|emb|CAC99816.1| lmo1738 [Listeria monocytogenes EGD-e] gi|284057744|gb|ADB68685.1| hypothetical protein LM5578_1938 [Listeria monocytogenes 08-5578] gi|284060791|gb|ADB71730.1| hypothetical protein LM5923_1889 [Listeria monocytogenes 08-5923] Length = 271 Score = 146 bits (368), Expect = 7e-33, Method: Composition-based stats. Identities = 41/273 (15%), Positives = 97/273 (35%), Gaps = 14/273 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILG---DIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K ++++ +++L + S++ S IKK + G++ V + + Sbjct: 1 MKKGLLITVMLMVMLALGACSSSESKEDQWSRIKKDKEVVIGLDDSFVPMGFRDKDDNLV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D +A+ + K ++ P++ + L++ ID++ T R+ + + Sbjct: 61 GFDIDLAKAVFAEYG---IKAKFTPIDWTMKESELKNGSIDLIWNGYTVTDARKKQVAFS 117 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH---PI 174 + Q + K I+ S + ++ Q G ++ +A + + P Sbjct: 118 Q--PYMKNEQVLVTLKSSNINQFSDMKNKTLGAQNGASSIDDMAKKPEVLTDIINNNEPE 175 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +++ + R D D ++ I+ + A + + D Sbjct: 176 LYDTFDTAFIDLNNKRIDGLIIDEVYARYYIDKQKNKDDYNIITGGFDATDFAVGMRKSD 235 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 E + A + G Q+ + D Sbjct: 236 KELQ---KKINEAFEKLYKEGKMQEISKKWFGD 265 >gi|330000991|ref|ZP_08303862.1| cystine-binding periplasmic protein [Klebsiella sp. MS 92-3] gi|328537826|gb|EGF64020.1| cystine-binding periplasmic protein [Klebsiella sp. MS 92-3] Length = 266 Score = 145 bits (367), Expect = 7e-33, Method: Composition-based stats. Identities = 50/272 (18%), Positives = 94/272 (34%), Gaps = 17/272 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + + ++++ S T A+ +L IK+RG L+ G+ F+ +G GF+ Sbjct: 8 RQAMMGAMAVVLMAGVSVKTFAAENLLNQIKERGTLRVGLEGTYPPFSFQGDDGKLTGFE 67 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F L+ + K P +L SK+ID++ + R+ Sbjct: 68 VEFANELAKHLG---VKADLKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDF--ST 122 Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G ++ K I + + L G + V GT ++ + + ++ Sbjct: 123 PYTVSGVQALVKKGNEGAIKTAADLKGKKVGVGLGT----NYEEWLRQNVQGVDVRTYDD 178 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R R DA D L AL L + + + S+ A+ +G+ + Sbjct: 179 DPTKYQDLRVGRIDAILVDR--LAALDLVKKTNNTLAVTGEAFSRQEAGVALRKGNDDLL 236 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 V M L + D T Sbjct: 237 KAVDGAIADMQKDGSLKALSE--KWFGADVTK 266 >gi|149909832|ref|ZP_01898483.1| hypothetical binding protein component ofABC transporter [Moritella sp. PE36] gi|149807164|gb|EDM67120.1| hypothetical binding protein component ofABC transporter [Moritella sp. PE36] Length = 266 Score = 145 bits (367), Expect = 7e-33, Method: Composition-based stats. Identities = 58/274 (21%), Positives = 104/274 (37%), Gaps = 23/274 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + L + F S S NA +IL I + G L+ + G + F N + GF Sbjct: 1 MIKTKISKAIALGTIIFCSASVNAGAILDGIAESGELRACFDAGYMPFEMKAKNNRYIGF 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLN--AKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 DVD + ++ + ++Y+P+N AL + + D++ R + + A Sbjct: 61 DVDLGKVMAKQMG-----VKYIPVNTAWDGIIPALITGKCDVIMAGMTVNAQRNMKVNFA 115 Query: 118 FRPITYFDGQGFIMHKKKG--ISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHP 173 GQ I++ K I S L+ ++ + GTT E+ + K Sbjct: 116 D--PYIVVGQSIILNPKLKGEIKSYKDLNNPKYTVASKLGTTGEVVVKRMLKKAKY---- 169 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 FE + + DA D+ + N E ++ + + PL A+ QG Sbjct: 170 NAFETETDAALEVINGKADAMIYDMPFVSIYAAQNSDKVEAIL--EPFTYEPLGWAVKQG 227 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 D + N ++ + + G + N+ K Sbjct: 228 DPDMINFLN---NFLRQIKGDGTYDRIYNKWFKS 258 >gi|315617857|gb|EFU98455.1| cystine-binding periplasmic protein [Escherichia coli 3431] Length = 266 Score = 145 bits (367), Expect = 7e-33, Method: Composition-based stats. Identities = 48/272 (17%), Positives = 94/272 (34%), Gaps = 17/272 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + ++ + ++ S + A +L +K+RG L G+ F+ +G GF+ Sbjct: 8 RQALMGVMAVALVVGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFE 67 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F + L+ + + S P +L SK+ID++ + R+ Sbjct: 68 VEFAQQLAKHLGVEAS---LKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDF--ST 122 Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G ++ K I + + L G + V GT ++ + + ++ Sbjct: 123 PYTISGIQALVKKGNEGTIKTAADLKGKKVGVGLGT----NYEEWLRQNVQGVDVRTYDD 178 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R R DA D L AL L + + S+ A+ +G+ + Sbjct: 179 DPTKYQDLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLL 236 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 V+ M L + D T Sbjct: 237 KAVNDAIAEMQKDGTLQALSE--KWFGADVTK 266 >gi|225621464|ref|YP_002722723.1| family 3 extracellular solute-binding protein [Brachyspira hyodysenteriae WA1] gi|225216285|gb|ACN85019.1| extracellular solute-binding protein, family 3 [Brachyspira hyodysenteriae WA1] Length = 269 Score = 145 bits (367), Expect = 7e-33, Method: Composition-based stats. Identities = 48/263 (18%), Positives = 94/263 (35%), Gaps = 19/263 (7%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K I+ + + S +A + + GI+ F + ++G GFD Sbjct: 22 MKKILTLIMIISSMLIVSCGNSAKTTET--ENKKIYVGIDVDFPPFGYLDSDGKIGGFDY 79 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D ++ +++ + K ALQ+K+ID + T R+ + + Sbjct: 80 DIMSEVAK---LSGLNVEFTHMQFKGLLPALQAKKIDAIIAGMTVTEERKQFVNFSE--P 134 Query: 122 TYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y Q ++HK I + L+G +I V GTT + + + + +N K F+ Sbjct: 135 YYVSSQVMLVHKDDDTIKTFDDLAGKNIGVVIGTTGDTIMTENKEVNNEK-----FDTGA 189 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A + + A D K + ++ A A+ + DT Sbjct: 190 AAVLALKEKKIAAIVFDKEP---CKNFAKYNDDIKLIESDAIVENYAIALRKEDTALLEK 246 Query: 241 VSWTHYAMVTAEELGITQKNINQ 263 ++ ++T G +K I + Sbjct: 247 INAGLSQVMT---NGTYEKLIEK 266 >gi|256959933|ref|ZP_05564104.1| extracellular solute-binding protein [Enterococcus faecalis Merz96] gi|293383503|ref|ZP_06629414.1| amino acid ABC transporter, amino acid-binding protein [Enterococcus faecalis R712] gi|293386671|ref|ZP_06631245.1| amino acid ABC transporter, amino acid-binding protein [Enterococcus faecalis S613] gi|312907121|ref|ZP_07766114.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis DAPTO 512] gi|312979300|ref|ZP_07790998.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis DAPTO 516] gi|256950429|gb|EEU67061.1| extracellular solute-binding protein [Enterococcus faecalis Merz96] gi|291079137|gb|EFE16501.1| amino acid ABC transporter, amino acid-binding protein [Enterococcus faecalis R712] gi|291083888|gb|EFE20851.1| amino acid ABC transporter, amino acid-binding protein [Enterococcus faecalis S613] gi|310626898|gb|EFQ10181.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis DAPTO 512] gi|311287894|gb|EFQ66450.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis DAPTO 516] gi|315164604|gb|EFU08621.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX1302] gi|315172707|gb|EFU16724.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX1346] Length = 273 Score = 145 bits (367), Expect = 7e-33, Method: Composition-based stats. Identities = 53/279 (18%), Positives = 98/279 (35%), Gaps = 17/279 (6%) Query: 1 MYKDFFVSIL--CLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + +++L C +L F +N I + + G++ V +G Sbjct: 2 MKKKYSLALLVICCSLLLFAGCGKRKSNEDQWTRINEEKRIIIGLDDSFVPMGFQDKSGK 61 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFDVD +A+ + + P++ + LQ++ ID++ T R + Sbjct: 62 IVGFDVDLAKAVFKLYGIS---VDFQPIDWSMKETELQNQTIDLIWNGYTKTSERAEKVQ 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYH 172 + Q + K+K I++ S + G + VQ G++ D K Sbjct: 119 FTQ--PYMTNDQVLVSLKEKNIATASDMQGKILGVQNGSSGYDGFESQPDVLKKFVKDQT 176 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 PI+++ E ++ R D D D + I A + + Sbjct: 177 PILYDGFNEAFLDLKSGRIDGLLIDRVYANYYLSHEDNLKNYTISHVGYDNEDFAVGVRK 236 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQK-NINQVSKDTTN 270 D + V + A T + G K + +D TN Sbjct: 237 SDNQL---VQKINTAFETLRKDGTLSKISQKWFGEDVTN 272 >gi|227818415|ref|YP_002822386.1| amino acid ABC transporter substrate-binding protein [Sinorhizobium fredii NGR234] gi|227337414|gb|ACP21633.1| putative amino acid ABC transporter, substrate-binding protein [Sinorhizobium fredii NGR234] Length = 278 Score = 145 bits (367), Expect = 8e-33, Method: Composition-based stats. Identities = 40/247 (16%), Positives = 89/247 (36%), Gaps = 13/247 (5%) Query: 11 CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSS 69 ++ + A L DI ++CG + FA + + GFDVD C A++ Sbjct: 10 AALVATAIAGPAKADKLADITAAKVIRCGTFADVPPFAAPDPSTREMAGFDVDLCNAIAR 69 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 + K + PL+ + R ++ +DI N +TL R + + Y + Sbjct: 70 ELG---VKAEIKPLSVEARVPEVKLGHVDIAVANLAYTLSRAEQIQFSH--PYYLAKEML 124 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 I+ + +G + G+T+EL + + P+ F+ A + Sbjct: 125 IVKADDPGQKKADFAGVRLASTKGSTSELAIRKN------ESKPLTFQDTGSAYLAVQQG 178 Query: 190 RCDAYTGDISALYALKLTNDRPS-EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 + + + + E ++ + + P+ + + + ++ A+ Sbjct: 179 KARGLVANTMTTTKIVKESKTKGAEMRMIEEPMLFQPIGIGMKKDEPALTAKINEILVAL 238 Query: 249 VTAEELG 255 T+ E+ Sbjct: 239 DTSGEIN 245 >gi|325567190|ref|ZP_08143857.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus casseliflavus ATCC 12755] gi|325158623|gb|EGC70769.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus casseliflavus ATCC 12755] Length = 267 Score = 145 bits (367), Expect = 8e-33, Method: Composition-based stats. Identities = 38/275 (13%), Positives = 85/275 (30%), Gaps = 11/275 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K I + + ++ + + G++ V G+ GFD Sbjct: 1 MKKLLLTGIAAASVFLLGACGSSNDTTTSAADKEEVIVGLDDTFVPMGFKDDQGNIVGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A+ + +K+++ P++ + L + ID++ T RE + Sbjct: 61 VDLATAI---LDLTGTKVKFQPIDWSMKETELSNGTIDMIWNGYTKTAAREEKVLF--TD 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPIVFE 177 + Q + K GI+S + G + Q G++ T + K ++ Sbjct: 116 TYMENKQVLVTAKSSGITSFDDMEGKVLGAQEGSSGYETFNNQPEVLKDLVDGNDATLYA 175 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E R D D + + + A + + D Sbjct: 176 SFNEAFIDLENGRIDGLLIDRVYAEYYLTQTGKTDDFNEIESPFEAEDFAVGVRKDDQAM 235 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272 + ++ + ++ G + + + P+ Sbjct: 236 ADKIND---GLKELQDNGTFAEISEKWFGEDVTPN 267 >gi|184154981|ref|YP_001843321.1| glutamine ABC transporter substrate binding component [Lactobacillus fermentum IFO 3956] gi|260663376|ref|ZP_05864267.1| glutamine ABC transporter substrate binding component [Lactobacillus fermentum 28-3-CHN] gi|183226325|dbj|BAG26841.1| glutamine ABC transporter substrate binding component [Lactobacillus fermentum IFO 3956] gi|260552228|gb|EEX25280.1| glutamine ABC transporter substrate binding component [Lactobacillus fermentum 28-3-CHN] gi|299782993|gb|ADJ40991.1| Glutamine ABC transporter substrate binding component [Lactobacillus fermentum CECT 5716] Length = 285 Score = 145 bits (367), Expect = 8e-33, Method: Composition-based stats. Identities = 53/292 (18%), Positives = 110/292 (37%), Gaps = 26/292 (8%) Query: 1 MYKDFFVSILCLIIL---------FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK 51 M + ++ +L L+++ T + I+KRG + G++ V + Sbjct: 1 MKRLKYLFVLVLLVIPAVLLSGCESVTQRAGTQDTWSRIEKRGKVIVGLDDSFVPMGFRE 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 +G G+D+D +A+ K+ + ++ + L++ ID++ T R Sbjct: 61 RDGKLVGYDIDLAKAVFKQYG---IKVDFQTIDWSMKETELKNGTIDLIWNGYSMTPERA 117 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 + + + Q + KK I++ + + G + VQ G+T L +Y K K Sbjct: 118 KQVAFSR--PYLLNRQVLVTKKKDHINNFNDMKGKVLGVQNGSTGMTDLDEYPKLLKDKI 175 Query: 172 H---PIVFERVEEIDAAYRAHRCDAYTGD-ISALYALKLTNDRPSEHVILPDIISKSPLA 227 PI+++ A+R D + A Y ++ + S + + + A Sbjct: 176 KGKSPILYDTFPNAFIDLNANRIQGILMDEVYANYYIQHQANAKSYSTYISNKMGADYFA 235 Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGI 279 + +GD V+ + +E G +K + +N FLG Sbjct: 236 VGMRKGDKTLKKKVN---EGLKRLQEDGQLKKINEKWFGKASN-----FLGP 279 >gi|257870690|ref|ZP_05650343.1| amino acid-binding protein Abp [Enterococcus gallinarum EG2] gi|257804854|gb|EEV33676.1| amino acid-binding protein Abp [Enterococcus gallinarum EG2] Length = 267 Score = 145 bits (367), Expect = 8e-33, Method: Composition-based stats. Identities = 38/275 (13%), Positives = 87/275 (31%), Gaps = 11/275 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + +L F + ++ + + G++ V GD GFD Sbjct: 1 MKKIGLTLLAGASLLLFAACGNSSEKAESAADKEEVIVGLDDTFVPMGFQDDQGDIVGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A+ +K+++ ++ + L + ID++ T RE + Sbjct: 61 VDLAKAV---FDLTGTKVKFQAIDWSMKETELDNGTIDMIWNGYTKTEAREKKVLF--SD 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT---TELTLADYFKAHNMKYHPIVFE 177 + Q + K I+S + + Q G++ T + K ++ Sbjct: 116 TYMENKQVLVTAKDSNITSFDAMKDKVLGAQEGSSGYDTFNNQPEVLKDIVADNEATLYA 175 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E R D D + ++ ++ A + + D Sbjct: 176 SFNEAFIDLENGRIDGLLIDRVYAEYYLTQTKKADDYNVIESPFKAENFAVGVRKDDQAL 235 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272 + ++ + +E G + + + +P+ Sbjct: 236 ADKIN---EGLKKLQENGTFAEISEKWFGEDVSPE 267 >gi|308067557|ref|YP_003869162.1| Cystine-binding periplasmic protein precursor [Paenibacillus polymyxa E681] gi|305856836|gb|ADM68624.1| Cystine-binding periplasmic protein precursor [Paenibacillus polymyxa E681] Length = 285 Score = 145 bits (367), Expect = 8e-33, Method: Composition-based stats. Identities = 56/288 (19%), Positives = 98/288 (34%), Gaps = 33/288 (11%) Query: 2 YKDFFVSILCLIILFF--------------------TSFSTNASILGDIKKRGFLKCGIN 41 K F V+ L + LF +S + L IKK G +K G+ Sbjct: 5 KKGFLVTTLMALALFSLVLSACGTKPEASNTSNGAGSSNVAAGNQLEAIKKAGVIKVGMM 64 Query: 42 TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101 + + N + GFDVD + L+ I P ++ +LQ K+ D + Sbjct: 65 GTYPPYNFLNDNKELDGFDVDIAKELAKRIGVKP---EFTAQEFSGLIPSLQKKKFDAVI 121 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTL 160 T R+ ++ + I++ K I+ + G +I V GT E L Sbjct: 122 SQVTITEDRKKAIDFTE--PYITNNVNIIVNSKTNDITKLEDFKGKTIGVGLGTNDESYL 179 Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK-LTNDRPSEHVILPD 219 + + ++ V + R DA + LYALK + + + + + Sbjct: 180 RNEVLPKVGDFEIKTYDDVITSLKDLNSGRIDATINN---LYALKPIIDKNGFQIKAVGE 236 Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 I AI Q E ++ M +E G + + + Sbjct: 237 PIKSDQAGVAINQKTPELKEALNKALKEM---KEDGTYKTIFKKWFGE 281 >gi|239944758|ref|ZP_04696695.1| putative glutamate ABC transporter substrate-binding protein [Streptomyces roseosporus NRRL 15998] gi|239991223|ref|ZP_04711887.1| putative glutamate ABC transporter substrate-binding protein [Streptomyces roseosporus NRRL 11379] Length = 307 Score = 145 bits (367), Expect = 8e-33, Method: Composition-based stats. Identities = 41/268 (15%), Positives = 89/268 (33%), Gaps = 18/268 (6%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDD 74 T ++ + K+RG L G + + GFD++ + +++ + Sbjct: 51 AATGVDLDSPVFKKAKERGKLVIGAKADQPYLGFEDQSTKERSGFDIELAKMVAADLGFS 110 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 +I++ +++ R A+ Q+D R+ +G A Y G ++ K Sbjct: 111 EKQIEWKTVDSGVRETAISKGQVDYYVGTYTINDERKKQVGFA--GPYYKAGADLLVRKD 168 Query: 135 -KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 I+ + G +C G+T + K + + + + DA Sbjct: 169 ETAITGKESVKGKKVCSIVGSTPLQEI----KKPEYGASVVELAKYSDCVQQLLTKQVDA 224 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 T D S L N + ++ + P + + D +S + V + Sbjct: 225 VTTDDSILKGYAAANK--GKLKVVGKPFTDEPYGIGLNKDDKVLREAISKSLEDRV---K 279 Query: 254 LGITQKNINQVSKDT-----TNPDVQRF 276 G +K + P ++R+ Sbjct: 280 DGTYKKIYEATLGLSGSDYVDPPAIERY 307 >gi|302522281|ref|ZP_07274623.1| glutamate binding periplasmic protein [Streptomyces sp. SPB78] gi|318060994|ref|ZP_07979715.1| glutamate binding periplasmic protein [Streptomyces sp. SA3_actG] gi|318077284|ref|ZP_07984616.1| glutamate binding periplasmic protein [Streptomyces sp. SA3_actF] gi|302431176|gb|EFL02992.1| glutamate binding periplasmic protein [Streptomyces sp. SPB78] Length = 280 Score = 145 bits (367), Expect = 8e-33, Method: Composition-based stats. Identities = 47/276 (17%), Positives = 93/276 (33%), Gaps = 15/276 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGF------LKCGINTGLVGFAEVKANGDWKGFD 60 VS ++L ++ D K G + GI G + +G + GFD Sbjct: 6 VSAAVAVVLTVGLAASACGKNDDDKASGGSGGGKKITIGIKFDQPGLGQKLPSGKFAGFD 65 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD ++ A+ ++I + + +R L+ +D ++ + T RE + A Sbjct: 66 VDVATYVAKALGYKTNQIVWKEAKSADRETMLERGDVDFIAASYSITDEREAKVDFA--G 123 Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Q ++ K I+ L+ +C G+T+ + K K + Sbjct: 124 PYLLAHQDILVRSDEKEINDPKDLNSKRLCSVTGSTSAQNIK---KELAPKAQLQEYGGY 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E DA T D S L + + + ++ + +G ++ + Sbjct: 181 SECLTGLENKAVDALTTDDSILAGYAAQKEFQGKFKLAGFKMTNENYGIGVKKG-SDLKD 239 Query: 240 IVSWTHYAMVTAEE-LGITQKNINQV-SKDTTNPDV 273 ++ MV + Q N K+ P + Sbjct: 240 KINDALKKMVDDKSWDKAVQDNFGPANYKNEPAPAI 275 >gi|312967121|ref|ZP_07781339.1| cystine-binding periplasmic protein [Escherichia coli 2362-75] gi|312288585|gb|EFR16487.1| cystine-binding periplasmic protein [Escherichia coli 2362-75] Length = 255 Score = 145 bits (367), Expect = 8e-33, Method: Composition-based stats. Identities = 48/266 (18%), Positives = 88/266 (33%), Gaps = 15/266 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V + L+ + +L +K+RG L G+ F+ +G GF+V+F + Sbjct: 3 VMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 62 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + + S P +L SK+ID++ + R+ G Sbjct: 63 LAKHLGVEAS---LKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDF--STPYTISG 117 Query: 127 QGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K I + L G + V GT ++ + + ++ Sbjct: 118 IQALVKKGNEGTIKTADDLKGKKVGVGLGT----NYEEWLRQNVQGVDVRTYDDDPTKYQ 173 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 R R DA D L AL L + + S+ A+ +G+ + V+ Sbjct: 174 DLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDA 231 Query: 245 HYAMVTAEELGITQKNINQVSKDTTN 270 M L + D T Sbjct: 232 IAEMQKDGTLQALSE--KWFGADVTK 255 >gi|301801564|emb|CBW34258.1| putative periplasmic solute-binding transport protein (pseudogene) [Streptococcus pneumoniae INV200] Length = 254 Score = 145 bits (367), Expect = 9e-33, Method: Composition-based stats. Identities = 44/215 (20%), Positives = 87/215 (40%), Gaps = 12/215 (5%) Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 +D++ L+ + K++Y+ ++A R L S ++DI N T R+ + A Sbjct: 43 YDIELGNQLAQDLG---VKVKYISVDAANRAEYLISNKVDITLANFTVTDERKKQVDFAL 99 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G + K I+ V QL G ++ V GTT E YF+ ++ + +++ Sbjct: 100 --PYMKVSLGVVSPKTGLITDVKQLEGKTLIVTKGTTAET----YFEKNHPEIKLQKYDQ 153 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + A R DA++ D + + A L N V + + +A A+ +G+ E Sbjct: 154 YSDSYQALLDGRGDAFSTDNTEVLAWALENK--GFEVGITSLGDPDTIAAAVQKGNQELL 211 Query: 239 NIVSWTHYAMVTAEEL-GITQKNINQVSKDTTNPD 272 + ++ + +K ++ D D Sbjct: 212 DFINKDIEKLGKENFFHKAYEKTLHPTYGDAAKAD 246 >gi|222087274|ref|YP_002545809.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221724722|gb|ACM27878.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 296 Score = 145 bits (366), Expect = 9e-33, Method: Composition-based stats. Identities = 54/271 (19%), Positives = 105/271 (38%), Gaps = 18/271 (6%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 + + L + + A L I ++G ++ G T V F+ K +G+ G+ +D C Sbjct: 9 LVLAGLALGVAAHVAAAAQTLDLIARKGTIRIGYITDEVPFSFKKKDGNPAGYTIDLCGK 68 Query: 67 LSSAIFDDPSKIQ--YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 ++ A+ +++ Y+ + + F A++S QID+L L R S+ + + Sbjct: 69 IADAVARKLPQVKRDYVEITLADGFDAVKSNQIDLLCGAVTINLGRRDSVDFSQ--PIFL 126 Query: 125 DGQGFIMHKKKG--------------ISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 G ++ K + S + I V+A TTT TL + + Sbjct: 127 TGASALLRKDSPEYLQILFLDKRPTRATDRKSPSASIIGVRADTTTGATLREALGPDVPQ 186 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 + F ++ A H+ DAY D + L +L PS I + + P A+ Sbjct: 187 TRVVDFSTHQDGLNALENHKIDAYFADRALLISLAAHARAPSTLAIGNRLFTHEPYGIAL 246 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 + D+ + +V +++ K Sbjct: 247 RRDDSTFRLLVDQALTEFYQSDDFPKLLKTY 277 >gi|152970962|ref|YP_001336071.1| cystine transporter subunit [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238895478|ref|YP_002920213.1| cystine transporter subunit [Klebsiella pneumoniae NTUH-K2044] gi|262043452|ref|ZP_06016575.1| amino acid ABC superfamily ATP binding cassette transporter [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|150955811|gb|ABR77841.1| cysteine transport protein (ABC superfamily, peri_bind) [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238547795|dbj|BAH64146.1| cysteine transporter periplasmic binding protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259039194|gb|EEW40342.1| amino acid ABC superfamily ATP binding cassette transporter [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 266 Score = 145 bits (366), Expect = 9e-33, Method: Composition-based stats. Identities = 50/272 (18%), Positives = 94/272 (34%), Gaps = 17/272 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + + ++++ S T A+ +L IK+RG L+ G+ F+ +G GF+ Sbjct: 8 RQAMMGAMAVVLMAGVSVKTFAAENLLNQIKERGTLRVGLEGTYPPFSFQGDDGKLTGFE 67 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F L+ + K P +L SK+ID++ + R+ Sbjct: 68 VEFANELAKHLG---VKADLKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDF--ST 122 Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G ++ K I + + L G + V GT ++ + + ++ Sbjct: 123 PYTVSGVQALVKKGNEGVIKTAADLKGKKVGVGLGT----NYEEWLRQNVQGVDVRTYDD 178 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R R DA D L AL L + + + S+ A+ +G+ + Sbjct: 179 DPTKYQDLRVGRIDAILVDR--LAALDLVKKTNNTLAVTGEAFSRQEAGVALRKGNDDLL 236 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 V M L + D T Sbjct: 237 KAVDGAIADMQKDGSLKALSE--KWFGADVTK 266 >gi|121534019|ref|ZP_01665845.1| extracellular solute-binding protein, family 3 [Thermosinus carboxydivorans Nor1] gi|121307530|gb|EAX48446.1| extracellular solute-binding protein, family 3 [Thermosinus carboxydivorans Nor1] Length = 254 Score = 145 bits (366), Expect = 9e-33, Method: Composition-based stats. Identities = 38/228 (16%), Positives = 77/228 (33%), Gaps = 7/228 (3%) Query: 33 RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92 + + G++ + GFDVD + + + ++++ P++ + L Sbjct: 26 KKKIVVGLDDNFPPMGFRDDKNNIVGFDVDMAKEAAKRLG---MEVEFKPIDWNSKEAEL 82 Query: 93 QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQA 152 K++D+L T R +AF + Q +++ I S + L+G + VQ Sbjct: 83 NGKRVDVLWNGLTITEKR--KENIAFTKPYMENRQIIVVNANSPIKSKADLAGKVVGVQD 140 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 G+++ + A + +A R DA D + +P Sbjct: 141 GSSSVEAVEKDAAALKSFKELKKYPDNVAALMDLKAGRLDAVVVD--EIVGRYYIAKKPG 198 Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 E+ IL D + + D E + + M K Sbjct: 199 EYAILADNFGSEEYGVGLRKDDKELLDKLQKVLDEMKKDGTAAKISKQ 246 >gi|283785665|ref|YP_003365530.1| cystine-binding periplasmic protein [Citrobacter rodentium ICC168] gi|282949119|emb|CBG88726.1| cystine-binding periplasmic protein [Citrobacter rodentium ICC168] Length = 266 Score = 145 bits (366), Expect = 9e-33, Method: Composition-based stats. Identities = 49/272 (18%), Positives = 90/272 (33%), Gaps = 17/272 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + +S++ + ++ S T A +L +K RG L G+ F+ +G GF+ Sbjct: 8 RQALMSVMAVALVAGMSAKTFADEGLLKKVKDRGTLLVGLEGTYPPFSFQGDDGKLTGFE 67 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F L+ + K P +L SK+ID++ + R+ Sbjct: 68 VEFAEELAKHLG---VKASLKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDF--ST 122 Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G ++ K I + + L + V GT ++ + + ++ Sbjct: 123 PYTVSGIQALVKKGNEGTIETAADLKDKKVGVGLGT----NYEEWLRQNVQGVDIRTYDD 178 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R R DA D L AL L + + S+ A+ +G+ + Sbjct: 179 DPTKYQDLRVGRIDAILVDR--LAALDLVKKTKDTLAVTGEAFSRQEAGVAVRKGNEDLL 236 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 V M L + D T Sbjct: 237 KAVDAAIADMQKDGSLKALSE--KWFGADVTK 266 >gi|315151627|gb|EFT95643.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX0012] Length = 277 Score = 145 bits (366), Expect = 9e-33, Method: Composition-based stats. Identities = 53/279 (18%), Positives = 99/279 (35%), Gaps = 17/279 (6%) Query: 1 MYKDFFVSIL--CLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + +++L C +L F +N I + + G++ V +G Sbjct: 2 MKKKYSLALLVICCSLLLFAGCGKRKSNEDQWTRINEEKRIIIGLDDSFVPMGFQDKSGK 61 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFDVD +A+ + + P++ + LQ++ ID++ T R + Sbjct: 62 IVGFDVDLAKAVFKLYGIS---VDFQPIDWSMKETELQNQTIDLIWNGYTKTSERAEKVQ 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYH 172 + Q + K+K I++ S + G + VQ G++ D K Sbjct: 119 FTQ--PYMTNDQVLVSLKEKNIATASDMQGKILGVQNGSSGYDGFESQPDVLKKFVKDQT 176 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 PI+++ E ++ R D D D + I A + + Sbjct: 177 PILYDGFNEAFLDLKSGRIDGLLIDRVYANYYLSHEDNLKNYTISHVGYDNEDFAVGVRK 236 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQK-NINQVSKDTTN 270 D + V + A T + G K + ++D TN Sbjct: 237 SDNQL---VQKINTAFETLRKDGTLSKISQKWFAEDVTN 272 >gi|319762272|ref|YP_004126209.1| extracellular solute-binding protein family 3 [Alicycliphilus denitrificans BC] gi|317116833|gb|ADU99321.1| extracellular solute-binding protein family 3 [Alicycliphilus denitrificans BC] Length = 300 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 53/259 (20%), Positives = 93/259 (35%), Gaps = 19/259 (7%) Query: 9 ILCLIILFFTSFSTNASIL------GDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDV 61 L +A+ + IK+ G L+ G F+ + +G +GFD Sbjct: 31 AAAFDALVAQGPVADAATIRSSTWASKIKQAGTLRLGGTQTSNLFSLLNEKDGKIRGFDA 90 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + ++ I D +K ++ + + R L + Q+D++ T R + A Sbjct: 91 GLAQLITRYILGDGAKYRFTQVTSSTREQVLINDQVDMVFATYSITPARAEKISFA--GP 148 Query: 122 TYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G ++ K I S + L+G + QAG+T LA Y F+ + Sbjct: 149 YYTSQAGVLVKANNKTIQSYNDLAGKKVATQAGSTGPAILAQYASKA----VVQEFQTHQ 204 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E A R R DAY D + L + P ++ P + +G Sbjct: 205 EALDALRQGRVDAYVTDYTLLLNALSLGTGDARLAGAP-FGAQDPYGVGLPKGSDG---- 259 Query: 241 VSWTHYAMVTAEELGITQK 259 V++ + + E G K Sbjct: 260 VAFINALLKKLEADGTWAK 278 >gi|261379030|ref|ZP_05983603.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria cinerea ATCC 14685] gi|269144568|gb|EEZ70986.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria cinerea ATCC 14685] Length = 268 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 54/274 (19%), Positives = 94/274 (34%), Gaps = 12/274 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFL-KCGINTGLVGFAEVKANGDWKGF 59 M K +I C + + G + + N F + + GD +GF Sbjct: 3 MKKWIAAAIACSALTLSACGGQSKDAASPAANTGKVYRVASNAEFAPFESLDSKGDVEGF 62 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD A++ KI++ F AL + D++ T R+ S+ Sbjct: 63 DVDLMNAMAKE---GNFKIEFKHQPWDSLFPALNNGDADVVMSGVTITDDRKQSMDF--S 117 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + Q ++ K K ISS L + V G T + +++ + N K FE Sbjct: 118 DPYFEITQVVLVPKGKKISSSDDLKNMNKVGVVTGYTGDFSVSKLLGSDNPKI--ARFEN 175 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS-EHVILPDIISKSPLAPAIIQGDTEW 237 V I D+ D + + N + V LPD + A+ +GD E Sbjct: 176 VPLIIKELENGGLDSVVSDSAVIANYVKNNPTKGMDFVTLPD-FTTEHYGIAVRKGDGET 234 Query: 238 YNIVSWTHYAMVTAEEL-GITQKNINQVSKDTTN 270 +++ + + E I K + + Sbjct: 235 LKVMNDALKKVRESGEYDKIYAKYFAKEGEQAAK 268 >gi|312139386|ref|YP_004006722.1| glutamate abc transporter substrate binding lipoprotein glub [Rhodococcus equi 103S] gi|325672733|ref|ZP_08152429.1| glutamate ABC superfamily ATP binding cassette transporter, binding protein [Rhodococcus equi ATCC 33707] gi|311888725|emb|CBH48037.1| putative glutamate ABC transporter substrate binding lipoprotein GluB [Rhodococcus equi 103S] gi|325556610|gb|EGD26276.1| glutamate ABC superfamily ATP binding cassette transporter, binding protein [Rhodococcus equi ATCC 33707] Length = 281 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 48/268 (17%), Positives = 91/268 (33%), Gaps = 19/268 (7%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 S +L D G L G G A + + GFDV+ + +++ + Sbjct: 26 SACGSSEPRDVLAD-AAEGQLTIGTKYDQPGLALREPDKTMTGFDVEVAKYIANYLGVPE 84 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KK 134 S I + + +R +++ ++D + T R+ + A Y GQ ++ Sbjct: 85 SGITWREAPSAQRENLIKNGEVDFVVGTYSITDNRKKVIDFA--GPYYVAGQSLLVRADD 142 Query: 135 KGISSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 I+ L G +C +G+T +A + F+ A + DA Sbjct: 143 DSITGAESLQGGKKLCSVSGSTPAQKIAKSYP----GVQLQQFDSYSSCVEALHRGKVDA 198 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 T D L P E + + + +G+TE ++ M+ Sbjct: 199 LTTDDIILAGYAAQ--YPGEFKLAGQPFTTELYGVGLPKGETEARMKINDAIEDMIAT-- 254 Query: 254 LGITQKNINQVSKDT-----TNPDVQRF 276 G Q+ + + D+ P V R+ Sbjct: 255 -GAWQRALEETMGDSGYALPAPPSVDRY 281 >gi|330825798|ref|YP_004389101.1| ABC transporter periplasmic subunit [Alicycliphilus denitrificans K601] gi|329311170|gb|AEB85585.1| ABC-type transporter, periplasmic subunit family 3 [Alicycliphilus denitrificans K601] Length = 300 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 53/259 (20%), Positives = 93/259 (35%), Gaps = 19/259 (7%) Query: 9 ILCLIILFFTSFSTNASIL------GDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDV 61 L +A+ + IK+ G L+ G F+ + +G +GFD Sbjct: 31 AAAFDALVAQGPVADAATIRSSTWASKIKQAGTLRLGGTQTSNLFSLLNEKDGKIRGFDA 90 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + ++ I D +K ++ + + R L + Q+D++ T R + A Sbjct: 91 GLAQLITRYILGDGAKYRFTQVTSSTREQVLINDQVDMVFATYSITPARAEKISFA--GP 148 Query: 122 TYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G ++ K I S + L+G + QAG+T LA Y F+ + Sbjct: 149 YYTSQAGVLVKANNKTIQSYNDLAGKKVATQAGSTGPAILAQYASKA----VVQEFQTHQ 204 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E A R R DAY D + L + P ++ P + +G Sbjct: 205 EALDALRQGRVDAYVTDYTLLLNALSLGTGDARLAGAP-FGAQDPYGVGLPKGSDG---- 259 Query: 241 VSWTHYAMVTAEELGITQK 259 V++ + + E G K Sbjct: 260 VAFINALLKKLEADGTWAK 278 >gi|326317637|ref|YP_004235309.1| family 3 extracellular solute-binding protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374473|gb|ADX46742.1| extracellular solute-binding protein family 3 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 283 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 53/273 (19%), Positives = 102/273 (37%), Gaps = 12/273 (4%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVD 62 I ++ L + +A L I++RG + G+ F + A+ G++ D Sbjct: 13 PLLAGIAAVLTLMAGTAHADA-TLDKIRQRGKVSIGVLVNGGPFGSIDPASQQLVGWNPD 71 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 RAL+ + + +Q + R LQ+ ++D+L + + R LG A P Sbjct: 72 LARALAKGLGVEADLVQ---VQTATRVQFLQAGKVDLLIASMELNPERAAILGYAPTPFY 128 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 G + K GI L G +C+ G++ L + A F+ + Sbjct: 129 RVGGTA-AVRKDSGIQKWEDLRGKPVCLSQGSSYARPLTAEYGAQ-----VQGFKTASDS 182 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI-LPDIISKSPLAPAIIQGDTEWYNIV 241 A + C A D + ++ L TN S++ + + +P +G+ + V Sbjct: 183 LLALKGGNCVAAVHDSTLIHPLLRTNAEWSQYAAPITAELLPAPSVVWTRKGEADTIAAV 242 Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 + L T+K + + P++Q Sbjct: 243 DKVVQDWHRSGWLIATEKRLGIEPANPLLPELQ 275 >gi|222081209|ref|YP_002540572.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221725888|gb|ACM28977.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 278 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 43/270 (15%), Positives = 97/270 (35%), Gaps = 16/270 (5%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRA 66 ++ + + S NA L DI ++CG + FA + GFDVD C A Sbjct: 7 TLSIALAATALAGSANADQLADIMTAKVIRCGTFADVPPFASPDPKTREMVGFDVDLCGA 66 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 ++ A+ P + P++ + R ++ +DI N +T+ R + Y Sbjct: 67 IAQALGVKP---EIKPVSVEARVPEVKLGHVDIAVANLAYTVSRSEQIQF--SDPYYLAK 121 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 + I+ + +G + G+T+EL++ K P+ F+ A Sbjct: 122 EMLIVKVGDAGQKKADFAGVRLASTKGSTSELSIR------LNKSQPLTFQDTGSAYLAV 175 Query: 187 RAHRCDAYTGDISALYALKLTNDRPS-EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + + + + + E ++ + + P+ + + + ++ Sbjct: 176 QQGKARGMVANTMTTTKIVNESKTKGAEMRMIDEPMLYQPIGIGMKKDEPALTAKINEVL 235 Query: 246 YAMVTAEELGITQKNINQVSKDTTNPDVQR 275 ++ + E+ K ++ T + R Sbjct: 236 VSLDKSGEIN---KIWDKWLGPNTEYKMTR 262 >gi|146312153|ref|YP_001177227.1| cystine transporter subunit [Enterobacter sp. 638] gi|145319029|gb|ABP61176.1| L-cystine-binding protein / Diaminopimelate-binding protein [Enterobacter sp. 638] Length = 266 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 47/267 (17%), Positives = 88/267 (32%), Gaps = 16/267 (5%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 +++ + L +F+ +L +K+RG L G+ F+ +G GF+V+F Sbjct: 14 VMAVALVAGLSMKTFAAEG-LLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAE 72 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 L+ + K P +L SK+ID++ + R+ Sbjct: 73 ELAKHLG---VKASLKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDF--STPYTVS 127 Query: 126 GQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 G ++ K I + + L G + V GT ++ + + ++ Sbjct: 128 GIQALVKKGNEGTIKTAADLKGKKVGVGLGT----NYEEWLRQNVQGVDIRTYDDDPTKY 183 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 R R DA D L AL L + + S+ AI + + + + Sbjct: 184 QDLRVGRIDAILVDR--LAALDLVKKTKDTLAVAGEPFSRQESGVAIRKDNDDLVKAIDG 241 Query: 244 THYAMVTAEELGITQKNINQVSKDTTN 270 M L + D T Sbjct: 242 AIAEMQKDGTLKALSE--KWFGADVTK 266 >gi|290968269|ref|ZP_06559812.1| putative histidine ABC transporter, periplasmic histidine-binding protein HisJ [Megasphaera genomosp. type_1 str. 28L] gi|290781751|gb|EFD94336.1| putative histidine ABC transporter, periplasmic histidine-binding protein HisJ [Megasphaera genomosp. type_1 str. 28L] Length = 266 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 36/265 (13%), Positives = 81/265 (30%), Gaps = 17/265 (6%) Query: 1 MYKD------FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M K V ++C+ +L + + I + + G++ G Sbjct: 1 MKKRSINIWMTLVIVMCVAVLAGCGHKPSETT--GIPDK--IIIGMDDNFPPMGFRDDQG 56 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 GFD+D + S + +++ ++ + AL+S Q+D+L T R+ + Sbjct: 57 QLVGFDIDVAKEASKRLGIP---VEFQSIDWDSKEAALKSGQVDVLWNGLTITPERQKVI 113 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + Q ++ I SG I Q G+++ L + Sbjct: 114 AF--SKPYMKNDQLLVVRSDSPIHDKQDFSGKCIGTQEGSSSIDALNRHKDFQRSLKDVK 171 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + R D D + +P + ++ + + + + D Sbjct: 172 KYGDYVNAFMDLEVGRIDGVLVDS--VVGRYYMEKKPGKFKVVDKSLGEETFGIGMRKED 229 Query: 235 TEWYNIVSWTHYAMVTAEELGITQK 259 + ++ + L K Sbjct: 230 KPLQDKMNKVMAELSRDGTLSALSK 254 >gi|197250151|ref|YP_002146069.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197213854|gb|ACH51251.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 266 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 95/268 (35%), Gaps = 18/268 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + ++ + ++ S + A +L +K+RG L G+ F+ +G GF+ Sbjct: 8 RRALMGVMAVALVAGMSAKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGEDGKLTGFE 67 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDF AL+ + K P +L +K+ID++ + +R+ Sbjct: 68 VDFAEALAKHLG---VKASLKPTKWDGILASLDAKRIDVVINQVTISDVRKKKYDF--ST 122 Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G ++ K I + + L G + V GT ++ + H ++ Sbjct: 123 PYTVSGVQALVKKGNEGTIKTAADLQGKKVGVGLGT----NYEEWLRQHVQGVDIRTYDD 178 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R R DA D L AL L + D S+ A+ +G+ + Sbjct: 179 DPTKYQDLRVGRIDAILVDR--LAALDLVKKTKGTLAVTGDAFSRQESGVALRKGNEDLL 236 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSK 266 V A+ ++ G + + Sbjct: 237 KAVD---NAIAEMQKDGTLKALSEKWFG 261 >gi|307705123|ref|ZP_07642000.1| ABC transporter substrate-binding protein [Streptococcus mitis SK597] gi|307621319|gb|EFO00379.1| ABC transporter substrate-binding protein [Streptococcus mitis SK597] Length = 279 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 52/274 (18%), Positives = 100/274 (36%), Gaps = 18/274 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 K + ++ L+ LF T+ + A +++G + G + V + NG + Sbjct: 4 KKIALVLVSLLTLFLTACTQKASDPKQDNWNKYQEQGSITIGFDNTFVPMGFEEKNGQYT 63 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D +A+S + KIQ+ P++ + LQ+ ID + T R + + Sbjct: 64 GFDIDLAQAVSEKLGF---KIQFQPIDWDMKETELQNGTIDAIWNGYSATDERREKVAFS 120 Query: 118 FRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHP 173 I Y + Q ++ KK I SV + ++ QAG++ L D K Sbjct: 121 ---IPYMENQQVLVAKKSQQIHSVEDMKDKTLGAQAGSSGYLDFEAQPDLLKNRVKDQKA 177 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 ++ E + R DA D + +++ + A + Sbjct: 178 NQYQSFNEALIDLKNDRIDALLIDRVYANYYLQSEGILNDYNVFSAGFESESFAVGVRPA 237 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 D ++ A V + G Q+ + + Sbjct: 238 DKRLLQALN---QAFVQLYQEGKFQEISQKWFGE 268 >gi|154245544|ref|YP_001416502.1| extracellular solute-binding protein [Xanthobacter autotrophicus Py2] gi|154159629|gb|ABS66845.1| extracellular solute-binding protein family 3 [Xanthobacter autotrophicus Py2] Length = 266 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 43/232 (18%), Positives = 87/232 (37%), Gaps = 7/232 (3%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 IK+RG L I+ + + G DV+ + L+ + ++ +P++ R Sbjct: 30 IKQRGKLIVAIDVSHPPYGMLDDKAKETGSDVETAQLLAKDLG---VALEVVPVSGANRV 86 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 +L + ++D++ + T R + + K I S + L+G SI Sbjct: 87 PSLLANKVDVVIASFSITPER--KKVVDYSLPYGVIPVVVSAPKAMAIKSPADLAGKSIA 144 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V GTT ++ L+ K + + + +E A + D +S A + Sbjct: 145 VARGTTADIELSRTIKDAKVAANIVRYEDEATAVTALATGQQDLLAAALST--ANTVAEQ 202 Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 P + + + ++ P+A + + D E V A + +L K Sbjct: 203 NPGKTLEVKLEMAAYPMAVGLRKTDPELKAYVDEWVKANLANGKLNDIYKKY 254 >gi|229546659|ref|ZP_04435384.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis TX1322] gi|256854335|ref|ZP_05559699.1| amino acid ABC transporter [Enterococcus faecalis T8] gi|307276214|ref|ZP_07557344.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX2134] gi|307296172|ref|ZP_07576002.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX0411] gi|229308226|gb|EEN74213.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis TX1322] gi|256709895|gb|EEU24939.1| amino acid ABC transporter [Enterococcus faecalis T8] gi|306496146|gb|EFM65726.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX0411] gi|306507126|gb|EFM76266.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX2134] gi|315030505|gb|EFT42437.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX4000] Length = 277 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 53/279 (18%), Positives = 98/279 (35%), Gaps = 17/279 (6%) Query: 1 MYKDFFVSIL--CLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + +++L C +L F +N I + + G++ V +G Sbjct: 2 MKKKYSLALLVICCSLLLFAGCGKRKSNEDQWTRINEEKRIIIGLDDSFVPMGFQDKSGK 61 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFDVD +A+ + + P++ + LQ++ ID++ T R + Sbjct: 62 IVGFDVDLAKAVFKLYGIS---VDFQPIDWSMKETELQNQTIDLIWNGYTKTSERAEKVQ 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYH 172 + Q + K+K I++ S + G + VQ G++ D K Sbjct: 119 FTQ--PYMTNDQVLVSLKEKNIATASDMQGKILGVQNGSSGYDGFESQPDILKKFVKDQT 176 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 PI+++ E ++ R D D D + I A + + Sbjct: 177 PILYDGFNEAFLDLKSGRIDGLLIDRVYANYYLSHEDNLKNYTISHVGYDNEDFAVGVRK 236 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQK-NINQVSKDTTN 270 D + V + A T + G K + +D TN Sbjct: 237 SDNQL---VQKINTAFETLRKDGTLSKISQKWFGEDVTN 272 >gi|170769446|ref|ZP_02903899.1| cystine-binding periplasmic protein [Escherichia albertii TW07627] gi|170121770|gb|EDS90701.1| cystine-binding periplasmic protein [Escherichia albertii TW07627] Length = 266 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 47/272 (17%), Positives = 93/272 (34%), Gaps = 17/272 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + ++ + ++ S + A +L +K+RG L G+ F+ +G GF+ Sbjct: 8 RQALMGVMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFE 67 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F + L+ + + + P +L SK+ID++ + R+ Sbjct: 68 VEFAQQLAKHLGVEAA---LKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDF--ST 122 Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G ++ K I + L G + V GT ++ + + ++ Sbjct: 123 PYTISGIQTLVKKGYEGTIKTADDLKGKKVGVGLGT----NYEEWLRQNVQGVDVRTYDD 178 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R R DA D L AL L + + S+ A+ +G+ + Sbjct: 179 DPTKYQDLRVGRIDAILVDR--LAALDLVKKTNDMLAVTGEAFSRQESGVALRKGNEDLL 236 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 V+ M L + D T Sbjct: 237 KAVNGAIAEMQKDGTLQALSE--KWFGADVTK 266 >gi|47095664|ref|ZP_00233271.1| amino acid ABC transporter, amino acid-binding protein [Listeria monocytogenes str. 1/2a F6854] gi|224499542|ref|ZP_03667891.1| amino acid ABC transporter, amino acid-binding protein [Listeria monocytogenes Finland 1988] gi|254900757|ref|ZP_05260681.1| amino acid ABC transporter (binding protein) [Listeria monocytogenes J0161] gi|254913757|ref|ZP_05263769.1| amino acid ABC transporter [Listeria monocytogenes J2818] gi|254938144|ref|ZP_05269841.1| amino acid ABC transporter [Listeria monocytogenes F6900] gi|47015949|gb|EAL06875.1| amino acid ABC transporter, amino acid-binding protein [Listeria monocytogenes str. 1/2a F6854] gi|258610758|gb|EEW23366.1| amino acid ABC transporter [Listeria monocytogenes F6900] gi|293591774|gb|EFG00109.1| amino acid ABC transporter [Listeria monocytogenes J2818] Length = 271 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 41/273 (15%), Positives = 98/273 (35%), Gaps = 14/273 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILG---DIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K ++++ +++L + S++ S IKK + G++ V + + Sbjct: 1 MKKGLLITVMLMVMLALGACSSSESKEDQWSRIKKDKEVVIGLDDSFVPMGFRDKDDNLV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D +A+ + K ++ P++ + L++ ID++ T R+ + + Sbjct: 61 GFDIDLAKAVFAEYG---IKAKFTPIDWTMKESELKNGSIDLIWNGYTVTDARKKQVAFS 117 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH---PI 174 + Q + K I+ S + ++ Q G ++ +A + + P Sbjct: 118 Q--PYMKNEQVLVTLKSSNINQFSDMKNKTLGAQNGASSIDDMAKKPEVLTDIINNNEPE 175 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +++ + R D D ++ I+ + A + + D Sbjct: 176 LYDTFDTAFIDLNNKRIDGLIIDEVYARYYIDKQKNKDDYNIITGGFDATDFAVGMRKSD 235 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 E + + A + G Q+ + D Sbjct: 236 KELQ---TKINEAFEKLYKEGKMQEISKKWFGD 265 >gi|323479996|gb|ADX79435.1| bacterial extracellular solute-binding protein [Enterococcus faecalis 62] Length = 276 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 53/279 (18%), Positives = 98/279 (35%), Gaps = 17/279 (6%) Query: 1 MYKDFFVSIL--CLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + +++L C +L F +N I + + G++ V +G Sbjct: 1 MKKKYSLALLVICCSLLLFAGCGKRKSNEDQWTRINEEKRIIIGLDDSFVPMGFQDKSGK 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFDVD +A+ + + P++ + LQ++ ID++ T R + Sbjct: 61 IVGFDVDLAKAVFKLYGIS---VDFQPIDWSMKETELQNQTIDLIWNGYTKTSERAEKVQ 117 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYH 172 + Q + K+K I++ S + G + VQ G++ D K Sbjct: 118 FTQ--PYMTNDQVLVSLKEKNIATASDMQGKILGVQNGSSGYDGFESQPDILKKFVKDQT 175 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 PI+++ E ++ R D D D + I A + + Sbjct: 176 PILYDGFNEAFLDLKSGRIDGLLIDRVYANYYLSHEDNLKNYTISHVGYDNEDFAVGVRK 235 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQK-NINQVSKDTTN 270 D + V + A T + G K + +D TN Sbjct: 236 SDNQL---VQKINTAFETLRKDGTLSKISQKWFGEDVTN 271 >gi|21224122|ref|NP_629901.1| glutamate binding protein [Streptomyces coelicolor A3(2)] gi|2687341|emb|CAA15882.1| glutamate binding protein [Streptomyces coelicolor A3(2)] Length = 278 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 38/227 (16%), Positives = 75/227 (33%), Gaps = 8/227 (3%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 + GI G + +G + GFDVD ++ + +I++ + +R LQ Sbjct: 39 KITIGIKFDQPGLGQKTPDG-YAGFDVDVATYVAKKLGYTEDQIEWKESKSADRETMLQR 97 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAG 153 +D ++ T R + A Q ++ I S L+ A +C G Sbjct: 98 GDVDFIAATYSITPERSEKVDFA--GPYLLAHQDVLIRADDDKIKSPEDLNDAKLCSVTG 155 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 +T+ + D K + + DA T D S L + + Sbjct: 156 STSAQNVKD---KLAPKAQLQKYPTYSACLNGLQTGAIDALTTDDSILAGYAAQSQFKGK 212 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 + ++ + +G ++ ++ AM T K+ Sbjct: 213 FKLGGFKMTNENYGIGVKKG-SDLKAKINDALEAMATDGAWDKAVKD 258 >gi|227554920|ref|ZP_03984967.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis HH22] gi|229548745|ref|ZP_04437470.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis ATCC 29200] gi|255971261|ref|ZP_05421847.1| extracellular solute-binding protein [Enterococcus faecalis T1] gi|255973881|ref|ZP_05424467.1| extracellular solute-binding protein [Enterococcus faecalis T2] gi|256617689|ref|ZP_05474535.1| extracellular solute-binding protein [Enterococcus faecalis ATCC 4200] gi|256761566|ref|ZP_05502146.1| extracellular solute-binding protein [Enterococcus faecalis T3] gi|256957331|ref|ZP_05561502.1| extracellular solute-binding protein [Enterococcus faecalis DS5] gi|256964363|ref|ZP_05568534.1| extracellular solute-binding protein [Enterococcus faecalis HIP11704] gi|257077673|ref|ZP_05572034.1| extracellular solute-binding protein [Enterococcus faecalis JH1] gi|257081061|ref|ZP_05575422.1| extracellular solute-binding protein [Enterococcus faecalis E1Sol] gi|257086158|ref|ZP_05580519.1| extracellular solute-binding protein [Enterococcus faecalis D6] gi|257089231|ref|ZP_05583592.1| extracellular solute-binding protein [Enterococcus faecalis CH188] gi|257415372|ref|ZP_05592366.1| extracellular solute-binding protein [Enterococcus faecalis AR01/DG] gi|257418406|ref|ZP_05595400.1| extracellular solute-binding protein [Enterococcus faecalis T11] gi|307270137|ref|ZP_07551454.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX4248] gi|307271413|ref|ZP_07552687.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX0855] gi|307284363|ref|ZP_07564528.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX0860] gi|312901658|ref|ZP_07760928.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX0470] gi|312905047|ref|ZP_07764172.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX0635] gi|312951825|ref|ZP_07770716.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX0102] gi|227175946|gb|EEI56918.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis HH22] gi|229306138|gb|EEN72134.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis ATCC 29200] gi|255962279|gb|EET94755.1| extracellular solute-binding protein [Enterococcus faecalis T1] gi|255966753|gb|EET97375.1| extracellular solute-binding protein [Enterococcus faecalis T2] gi|256597216|gb|EEU16392.1| extracellular solute-binding protein [Enterococcus faecalis ATCC 4200] gi|256682817|gb|EEU22512.1| extracellular solute-binding protein [Enterococcus faecalis T3] gi|256947827|gb|EEU64459.1| extracellular solute-binding protein [Enterococcus faecalis DS5] gi|256954859|gb|EEU71491.1| extracellular solute-binding protein [Enterococcus faecalis HIP11704] gi|256985703|gb|EEU73005.1| extracellular solute-binding protein [Enterococcus faecalis JH1] gi|256989091|gb|EEU76393.1| extracellular solute-binding protein [Enterococcus faecalis E1Sol] gi|256994188|gb|EEU81490.1| extracellular solute-binding protein [Enterococcus faecalis D6] gi|256998043|gb|EEU84563.1| extracellular solute-binding protein [Enterococcus faecalis CH188] gi|257157200|gb|EEU87160.1| extracellular solute-binding protein [Enterococcus faecalis ARO1/DG] gi|257160234|gb|EEU90194.1| extracellular solute-binding protein [Enterococcus faecalis T11] gi|306503303|gb|EFM72555.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX0860] gi|306511908|gb|EFM80904.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX0855] gi|306513506|gb|EFM82121.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX4248] gi|310630228|gb|EFQ13511.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX0102] gi|310631626|gb|EFQ14909.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX0635] gi|311291269|gb|EFQ69825.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX0470] gi|315027600|gb|EFT39532.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX2137] gi|315031303|gb|EFT43235.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX0017] gi|315035307|gb|EFT47239.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX0027] gi|315148310|gb|EFT92326.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX4244] gi|315154252|gb|EFT98268.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX0031] gi|315154875|gb|EFT98891.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX0043] gi|315166989|gb|EFU11006.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX1341] gi|315170862|gb|EFU14879.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX1342] gi|315573425|gb|EFU85616.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX0309B] gi|315576573|gb|EFU88764.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX0630] gi|315581343|gb|EFU93534.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX0309A] gi|329577683|gb|EGG59111.1| ABC transporter, substrate-binding protein, family 3 [Enterococcus faecalis TX1467] Length = 277 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 53/279 (18%), Positives = 98/279 (35%), Gaps = 17/279 (6%) Query: 1 MYKDFFVSIL--CLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + +++L C +L F +N I + + G++ V +G Sbjct: 2 MKKKYSLALLVICCSLLLFAGCGKRKSNEDQWTRINEEKRIIIGLDDSFVPMGFQDKSGK 61 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFDVD +A+ + + P++ + LQ++ ID++ T R + Sbjct: 62 IVGFDVDLAKAVFKLYGIS---VDFQPIDWSMKETELQNQTIDLIWNGYTKTSERAEKVQ 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYH 172 + Q + K+K I++ S + G + VQ G++ D K Sbjct: 119 FTQ--PYMTNDQVLVSLKEKNIATASDMQGKILGVQNGSSGYDGFESQPDVLKKFVKDQT 176 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 PI+++ E ++ R D D D + I A + + Sbjct: 177 PILYDGFNEAFLDLKSGRIDGLLIDRVYANYYLSHEDNLKNYTISHVGYDNEDFAVGVRK 236 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQK-NINQVSKDTTN 270 D + V + A T + G K + +D TN Sbjct: 237 SDNQL---VQKINTAFETLRKDGTLSKISQKWFGEDVTN 272 >gi|330810053|ref|YP_004354515.1| ABC transporter, periplasmic component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327378161|gb|AEA69511.1| ABC transporter, periplasmic component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 272 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 47/272 (17%), Positives = 90/272 (33%), Gaps = 11/272 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M L +++ +A L DI G L+C + + GFD Sbjct: 1 MKNPALAVALSVVLTPLFIAPAHADKLDDIIGSGKLRCAVTLDFPPMGFRDESNKPAGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+C L+ + D + + +R AL S + D++ +T TL R ++GL Sbjct: 61 VDYCNDLAKVLGVDA---EVVETPFSDRIPALLSGRADVIVASTSDTLERAKTVGLT--- 114 Query: 121 ITYFDGQ-GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + YF Q + GI+S + L G ++ + T + L K+ ++ Sbjct: 115 VPYFAFQMVVLTRDNTGITSYADLKGKALGNTSSTYEAIALEKDQKSWGSG-SFRAYQSQ 173 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + A DA + A + + ++ + + N Sbjct: 174 NDTLLAVAQGHIDATVVTNTVAAATIKSGKYKGLKIAGDAPYVIDYVSLGAKRSEYGLLN 233 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 ++ V G ++ + P Sbjct: 234 YLNLFVNQQVRT---GRYKELFVKWVGTDIPP 262 >gi|257083724|ref|ZP_05578085.1| extracellular solute-binding protein [Enterococcus faecalis Fly1] gi|256991754|gb|EEU79056.1| extracellular solute-binding protein [Enterococcus faecalis Fly1] Length = 273 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 53/279 (18%), Positives = 98/279 (35%), Gaps = 17/279 (6%) Query: 1 MYKDFFVSIL--CLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + +++L C +L F +N I + + G++ V +G Sbjct: 2 MKKKYSLALLVICCSLLLFAGCGKRKSNEDQWTRINEEKRIIIGLDDSFVPMGFQDKSGK 61 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFDVD +A+ + + P++ + LQ++ ID++ T R + Sbjct: 62 IVGFDVDLAKAV---FKLYSISVDFQPIDWSMKETELQNQTIDLIWNGYTKTSERAEKVQ 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYH 172 + Q + K+K I++ S + G + VQ G++ D K Sbjct: 119 FTQ--PYMTNDQVLVSLKEKNIATASDMQGKILGVQNGSSGYDGFESQPDVLKKFVKDQT 176 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 PI+++ E ++ R D D D + I A + + Sbjct: 177 PILYDGFNEAFLDLKSGRIDGLLIDRVYANYYLSHEDNLKNYTISHVGYDNEDFAVGVRK 236 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQK-NINQVSKDTTN 270 D + V + A T + G K + +D TN Sbjct: 237 SDNQL---VQKINTAFETLRKDGTLSKISQKWFGEDVTN 272 >gi|326793481|ref|YP_004311301.1| ABC-type transporter periplasmic subunit family 3 [Marinomonas mediterranea MMB-1] gi|326544245|gb|ADZ89465.1| ABC-type transporter, periplasmic subunit family 3 [Marinomonas mediterranea MMB-1] Length = 267 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 41/239 (17%), Positives = 90/239 (37%), Gaps = 11/239 (4%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 +L DI+ R ++ + F V + +G DVD ++ + D ++ +P+ Sbjct: 30 DVLQDIQDRKEIRIAVPQDFPPFGSVGPDLKPQGIDVDMANYIADQLDVD---LKIVPVT 86 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 + R LQ+K++D++ + RE ++ +F G ++ ++ L+ Sbjct: 87 SANRIPYLQTKKVDLVISSLGKNPEREKAIDFTTPYAPFF--LGVFGESSVDVTKMADLA 144 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G ++ V G+ +L L Y + FE AY + L A Sbjct: 145 GKTVGVTRGSVEDLELEKYAPK---SLNVRRFEDNNTTLTAYLTGQVKLIATGN--LVAT 199 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQKNIN 262 ++ +P ++ SP + +G+ + ++ + L I+ K + Sbjct: 200 EIAKRQPQRAPETKFLLKDSPCYIGLAEGEAALQSKINGIISTALENGTLNDISMKWLK 258 >gi|257866713|ref|ZP_05646366.1| amino acid-binding protein Abp [Enterococcus casseliflavus EC30] gi|257872770|ref|ZP_05652423.1| amino acid-binding protein Abp [Enterococcus casseliflavus EC10] gi|257876304|ref|ZP_05655957.1| amino acid-binding protein Abp [Enterococcus casseliflavus EC20] gi|257800671|gb|EEV29699.1| amino acid-binding protein Abp [Enterococcus casseliflavus EC30] gi|257806934|gb|EEV35756.1| amino acid-binding protein Abp [Enterococcus casseliflavus EC10] gi|257810470|gb|EEV39290.1| amino acid-binding protein Abp [Enterococcus casseliflavus EC20] Length = 267 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 38/275 (13%), Positives = 85/275 (30%), Gaps = 11/275 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K I + + ++ + + G++ V G+ GFD Sbjct: 1 MKKLLLTGIAAASVFLLGACGSSNDTTTSAADKEEVIVGLDDTFVPMGFKDDQGNIVGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A+ + +K+++ P++ + L + ID++ T RE + Sbjct: 61 VDLATAI---LDLTGTKVKFQPIDWSMKETELSNGTIDMIWNGYTKTAAREEKVLF--TD 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPIVFE 177 + Q + K GI+S + G + Q G++ T + K ++ Sbjct: 116 TYMENKQVLVTAKASGITSFDDMEGKVLGAQEGSSGYETFNNQPEVLKDLVDGNDATLYA 175 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E R D D + + + A + + D Sbjct: 176 SFNEAFIDLENGRIDGLLIDRVYAEYYLTQTGKTDDFNEIESPFEAEDFAVGVRKDDQAM 235 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272 + ++ + ++ G + + + P+ Sbjct: 236 ADKIND---GLKELQDNGTFAEISEKWFGEDVTPN 267 >gi|227517775|ref|ZP_03947824.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis TX0104] gi|227074772|gb|EEI12735.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis TX0104] Length = 277 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 53/279 (18%), Positives = 99/279 (35%), Gaps = 17/279 (6%) Query: 1 MYKDFFVSIL--CLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + +++L C +L F +N I + + G++ V +G+ Sbjct: 2 MKKKYSLALLVICCSLLLFAGCGKRKSNEDQWTRINEEKRIIIGLDDSFVPMGFQDKSGN 61 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFDVD +A+ + + P++ + LQ++ ID++ T R + Sbjct: 62 IVGFDVDLAKAVFKLYGIS---VDFQPIDWSMKETELQNQTIDLIWNGYTKTSERAEKVQ 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYH 172 + Q + K+K I++ S + G + VQ G++ D K Sbjct: 119 FTQ--PYMTNDQVLVSLKEKNIATASDMQGKILGVQNGSSGYDGFESQPDVLKKFVKDQT 176 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 PI+++ E ++ R D D D + I A + + Sbjct: 177 PILYDGFNEAFLDLKSGRIDGLLIDRVYANYYLSHEDNLKNYTISHVGYDNEDFAVGVRK 236 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQK-NINQVSKDTTN 270 D + V + A T + G K + +D TN Sbjct: 237 SDNQL---VKKINTAFETLRKDGTLSKISQKWFGEDVTN 272 >gi|29375393|ref|NP_814547.1| amino acid ABC transporter, amino acid-binding protein [Enterococcus faecalis V583] gi|257421055|ref|ZP_05598045.1| ABC amino acid transporter [Enterococcus faecalis X98] gi|294779830|ref|ZP_06745216.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis PC1.1] gi|29342853|gb|AAO80617.1| amino acid ABC transporter, amino acid-binding protein [Enterococcus faecalis V583] gi|257162879|gb|EEU92839.1| ABC amino acid transporter [Enterococcus faecalis X98] gi|294453104|gb|EFG21520.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis PC1.1] gi|295113981|emb|CBL32618.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [Enterococcus sp. 7L76] Length = 276 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 53/279 (18%), Positives = 98/279 (35%), Gaps = 17/279 (6%) Query: 1 MYKDFFVSIL--CLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + +++L C +L F +N I + + G++ V +G Sbjct: 1 MKKKYSLALLVICCSLLLFAGCGKRKSNEDQWTRINEEKRIIIGLDDSFVPMGFQDKSGK 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFDVD +A+ + + P++ + LQ++ ID++ T R + Sbjct: 61 IVGFDVDLAKAVFKLYGIS---VDFQPIDWSMKETELQNQTIDLIWNGYTKTSERAEKVQ 117 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYH 172 + Q + K+K I++ S + G + VQ G++ D K Sbjct: 118 FTQ--PYMTNDQVLVSLKEKNIATASDMQGKILGVQNGSSGYDGFESQPDVLKKFVKDQT 175 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 PI+++ E ++ R D D D + I A + + Sbjct: 176 PILYDGFNEAFLDLKSGRIDGLLIDRVYANYYLSHEDNLKNYTISHVGYDNEDFAVGVRK 235 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQK-NINQVSKDTTN 270 D + V + A T + G K + +D TN Sbjct: 236 SDNQL---VQKINTAFETLRKDGTLSKISQKWFGEDVTN 271 >gi|291448221|ref|ZP_06587611.1| glutamate binding periplasmic protein [Streptomyces roseosporus NRRL 15998] gi|291351168|gb|EFE78072.1| glutamate binding periplasmic protein [Streptomyces roseosporus NRRL 15998] Length = 299 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 41/268 (15%), Positives = 89/268 (33%), Gaps = 18/268 (6%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDD 74 T ++ + K+RG L G + + GFD++ + +++ + Sbjct: 43 AATGVDLDSPVFKKAKERGKLVIGAKADQPYLGFEDQSTKERSGFDIELAKMVAADLGFS 102 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 +I++ +++ R A+ Q+D R+ +G A Y G ++ K Sbjct: 103 EKQIEWKTVDSGVRETAISKGQVDYYVGTYTINDERKKQVGFA--GPYYKAGADLLVRKD 160 Query: 135 -KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 I+ + G +C G+T + K + + + + DA Sbjct: 161 ETAITGKESVKGKKVCSIVGSTPLQEI----KKPEYGASVVELAKYSDCVQQLLTKQVDA 216 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 T D S L N + ++ + P + + D +S + V + Sbjct: 217 VTTDDSILKGYAAANK--GKLKVVGKPFTDEPYGIGLNKDDKVLREAISKSLEDRV---K 271 Query: 254 LGITQKNINQVSKDT-----TNPDVQRF 276 G +K + P ++R+ Sbjct: 272 DGTYKKIYEATLGLSGSDYVDPPAIERY 299 >gi|300870609|ref|YP_003785480.1| polar amino acid uptake ABC transporter amino acid-binding protein [Brachyspira pilosicoli 95/1000] gi|300688308|gb|ADK30979.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Brachyspira pilosicoli 95/1000] Length = 268 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 44/273 (16%), Positives = 92/273 (33%), Gaps = 15/273 (5%) Query: 1 MYKDFFVSILCLIILFFT------SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M + + + + + + + + + L +K++G L G++ G Sbjct: 1 MKRILILFSMIIFAISCSKTETQNTQAGADNSLQKVKEKGKLVLGLDDTFAPMGFRDEAG 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + GFD+D + +++ + K++ P++ L+L +D+L R+ + Sbjct: 61 NVVGFDIDLAQEVANRLG---VKLEVKPIDWASGILSLNKGDVDMLWNGFTINETRKQQI 117 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + +P +K I+S L G + VQ G+ E AD + P Sbjct: 118 NFS-KPYLNNRLIIVKSSDRKDINSKEDLKGKVLGVQVGSNQEALEADPISKEAKEVRP- 175 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 ++ +A R D D A + + V+ +++ + D Sbjct: 176 -YDVNVNAFLDLQAKRIDVVVIDEVAARYYIAE-ENVNFEVVENSPLTEELYGIGFRKND 233 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 E N V M + KD Sbjct: 234 VELLNAVDKALDDMRADGKAAEIST--KWFGKD 264 >gi|167587289|ref|ZP_02379677.1| ABC polar amino acid transporter, periplasmic ligand binding protein [Burkholderia ubonensis Bu] Length = 264 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 60/273 (21%), Positives = 105/273 (38%), Gaps = 21/273 (7%) Query: 3 KDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K V+ LI FT+ + +A +L ++K+RG L+ G+ F G+ GFDV Sbjct: 7 KKLLVA--GLIGASFTAATAHAADLLDEVKQRGTLRVGLEGTFPPFNSKSPQGELVGFDV 64 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D +A+++ + P +++ LQ+ + D+++ T R+ +L P Sbjct: 65 DIAKAVAAKLGVKP---EFVTTEWSGIIAGLQAGKFDVIANQVGITDKRKETLDF--SPA 119 Query: 122 TYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + I K S+ L G + V G T + +A ++K +P Sbjct: 120 YTYSSAQLIQRKDDTRQFKSLEDLKGKKLGVALG-TNYMDMAKSVPGIDVKTYPGA---- 174 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A R DA D L L + P ++ S +P +G+ ++ Sbjct: 175 PEYLRDLAAGRLDAALNDRLMLAYLTKNSQLP--LRPGANVGSANPSGIPFKKGNPKFQK 232 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSK-DTTNP 271 + AM E G K ++ D T P Sbjct: 233 AIGD---AMAQLEADGTFTKISDKWFGIDVTKP 262 >gi|291085212|ref|ZP_06352421.2| cystine ABC transporter, periplasmic cystine binding protein [Citrobacter youngae ATCC 29220] gi|291072355|gb|EFE10464.1| cystine ABC transporter, periplasmic cystine binding protein [Citrobacter youngae ATCC 29220] Length = 273 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 50/272 (18%), Positives = 92/272 (33%), Gaps = 17/272 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + ++ + ++ S T A +L +K+RG L G+ F+ +G GF+ Sbjct: 15 RQALMGVMAVALVAGMSVKTYADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFE 74 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F AL+ + K P +L SK+ID++ + R+ Sbjct: 75 VEFAEALAKHLG---VKATLKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDF--ST 129 Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G ++ K I + + L G + V GT ++ + + ++ Sbjct: 130 PYTVSGIQALVKKGNEGVIKTAADLKGKKVGVGLGT----NYEEWLRQNVQGVDIRTYDD 185 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R R DA D L AL L + + S+ A+ +G+ + Sbjct: 186 DPTKYQDLRVGRIDAILVDR--LAALDLVKKTKDTLAVTGEAFSRQESGVALRKGNEDLL 243 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 V M L + D T Sbjct: 244 KAVDAAIAEMQKDGTLKALSE--KWFGADVTK 273 >gi|261340318|ref|ZP_05968176.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Enterobacter cancerogenus ATCC 35316] gi|288317409|gb|EFC56347.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Enterobacter cancerogenus ATCC 35316] Length = 266 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 49/266 (18%), Positives = 87/266 (32%), Gaps = 15/266 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V + L+ ++L +K+RG L G+ F+ +G GF+V+F Sbjct: 14 VMAVALVAGMSVKTFAAENLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAEE 73 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + K P +L SK+ID++ + R+ G Sbjct: 74 LAKHLG---VKASLKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDF--STPYTVSG 128 Query: 127 QGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K I S + L G + V GT ++ + + ++ Sbjct: 129 IQALVKKGNEGTIKSAADLKGKKVGVGLGT----NYEEWLRQNVQGVDIRTYDDDPTKYQ 184 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 R R DA D L AL L + + D S+ A+ +G+ + + Sbjct: 185 DLRVGRIDAILVDR--LAALDLVKKTNNTLAVAGDAFSRQESGVAVRKGNDDLLKAIDGA 242 Query: 245 HYAMVTAEELGITQKNINQVSKDTTN 270 M L + D T Sbjct: 243 IAEMQKDGSLKALSE--KWFGADVTK 266 >gi|269956046|ref|YP_003325835.1| extracellular solute-binding protein family 3 protein [Xylanimonas cellulosilytica DSM 15894] gi|269304727|gb|ACZ30277.1| extracellular solute-binding protein family 3 [Xylanimonas cellulosilytica DSM 15894] Length = 282 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 43/222 (19%), Positives = 81/222 (36%), Gaps = 10/222 (4%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 G +K G+ G D GFDVD ++ + +IQ++ + +R LQ Sbjct: 38 GSIKIGVKFDQPGLGFQDGA-DHTGFDVDVATYVAEKLGYSVDQIQWVESPSAQREQMLQ 96 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQA 152 + Q+D++ T R+ + A + GQ ++ I+ L+G ++C Sbjct: 97 TGQVDMIFATYSITDARKEVIDFA--GPYFVAGQDLLVAADNTDINGPEDLAGKNLCSVT 154 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA--HRCDAYTGDISALYALKLTNDR 210 G+T+ + D H + + E A A DA T D L L T+ Sbjct: 155 GSTSAQKIKD---EHADTVNLLERPGYAECVTALVAANAEIDAVTTDDIILAGLAATDAN 211 Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 + ++ S + +G ++ M++ Sbjct: 212 RGKVKVVGAPFSTERYGVGLPKGSDR-CEAINEAIGEMISDG 252 >gi|322368978|ref|ZP_08043545.1| ABC-type glutamine/glutamate/polar amino acids transport system, substrate-binding protein [Haladaptatus paucihalophilus DX253] gi|320551709|gb|EFW93356.1| ABC-type glutamine/glutamate/polar amino acids transport system, substrate-binding protein [Haladaptatus paucihalophilus DX253] Length = 275 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 43/257 (16%), Positives = 83/257 (32%), Gaps = 23/257 (8%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + F I + + +A + G ++ G + F G+ GFDV Sbjct: 3 RRSFLRGTGGAIAALTFAENASA------QNNGTIRIGSDIPYRPFEYRTKTGELVGFDV 56 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D A+ D +++ + +L + ++ T R S + F Sbjct: 57 DIANAVFEGQLD--RNYEFVQTSFDTIIPSLNNGNFRVIMSAMTITPER--SKQVDFSDP 112 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + Q ++ K I+S+ L G ++ VQ GTT E D K N ++++ Sbjct: 113 YFTAYQTVLILKNSDITSLQDLKGETVAVQKGTTGEAAAQDLKKQFNGDLTIDSYDQIPG 172 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-------------IISKSPLAP 228 +A ++ A D + ND + ++ Sbjct: 173 AFSALGNNQAAAVINDNTVNAEFAQQNDNVTFLKGEGAAQEQGKENAPPYLTLTVEEYGI 232 Query: 229 AIIQGDTEWYNIVSWTH 245 A + D + N V+ Sbjct: 233 AFRKNDDQLKNQVNDAL 249 >gi|187919667|ref|YP_001888698.1| family 3 extracellular solute-binding protein [Burkholderia phytofirmans PsJN] gi|187718105|gb|ACD19328.1| extracellular solute-binding protein family 3 [Burkholderia phytofirmans PsJN] Length = 274 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 43/258 (16%), Positives = 92/258 (35%), Gaps = 16/258 (6%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 ++ L L + +A L +I K G ++ G+ F + + G+D+D Sbjct: 22 LAFTALGALCALPSAAHADALDNIAKSGTVRIGVFEDYPPFGSIGPDMKPMGYDIDVANL 81 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 + A+ +K++ + + R L + D+L + T RE + + Y+ Sbjct: 82 IGKAL---NAKVELVQVTGDNRMAYLADHKADMLL-SVGQTPEREKVIDFSQPYAPYY-- 135 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 K + + + L+G SI V GT +L++ + F+ +A+ Sbjct: 136 LAVFGPKALPVKNAADLAGKSISVARGTLEDLSVTKIAP---PTANIKRFDDPNGAISAF 192 Query: 187 RAHRCDAYT--GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + + D+ A + + P + + SP + + + V T Sbjct: 193 LSGQVQLMVVGNDVGATILARHPANDPEQ----KFSLFSSPDHVGLNKNEPRLKQKVDET 248 Query: 245 HYAMVTAEELG-ITQKNI 261 + I+QK + Sbjct: 249 IAKARKDGTMNAISQKWL 266 >gi|257095770|ref|YP_003169411.1| family 3 extracellular solute-binding protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257048294|gb|ACV37482.1| extracellular solute-binding protein family 3 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 304 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 43/239 (17%), Positives = 80/239 (33%), Gaps = 8/239 (3%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI----FDDPSK 77 + L I+ + G G FA + GF +D CR ++ AI Sbjct: 29 AGSPTLDKIRAAETVYLGYREGSAPFAYLDPEQKAIGFSLDLCRHVTDAIQARLGLPALS 88 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 + +P R + L+++ ID+ T R+ S +A+ + G ++ + + Sbjct: 89 VVQVPTTPGSRQIMLEAETIDLDCGPVTNTEQRQRS--VAYSVTIFVAGVKALVRQDSSV 146 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 ++ L + AGTT E + + + E D D Sbjct: 147 RALKDLKDKVVVTTAGTTAEAYIKSAAVRQGLLINYRFGRDHAESLRLLLRGNADVLVLD 206 Query: 198 ISALYALKLTND--RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 + L L ++L D P A + D E+ +V T ++ + E Sbjct: 207 DALLAGLLSNLPPAERGRLIVLADSYGFEPYGLAFRRQDPEFKRLVDDTLVGVMQSGEF 265 >gi|194434955|ref|ZP_03067198.1| cystine-binding periplasmic protein [Shigella dysenteriae 1012] gi|194416790|gb|EDX32916.1| cystine-binding periplasmic protein [Shigella dysenteriae 1012] gi|320178179|gb|EFW53156.1| Cystine ABC transporter, periplasmic cystine-binding protein FliY [Shigella boydii ATCC 9905] Length = 255 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 48/266 (18%), Positives = 89/266 (33%), Gaps = 15/266 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V + L+ + +L +K+RG L G+ F+ +G GF+V+F + Sbjct: 3 VMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 62 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + + S P +L SK+ID++ + R+ G Sbjct: 63 LAKHLGVEAS---LKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDF--STPYTISG 117 Query: 127 QGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K I + + L G + V GT ++ + + ++ Sbjct: 118 IQALVKKGNEGTIKTAADLKGKKVGVGLGT----NYEEWLRQNVQGVDVRTYDDDPTKYQ 173 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 R R DA D L AL L + + S+ A+ +G+ + V+ Sbjct: 174 DLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDA 231 Query: 245 HYAMVTAEELGITQKNINQVSKDTTN 270 M L + D T Sbjct: 232 IAEMQKDGTLQALSE--KWFGADVTK 255 >gi|224583545|ref|YP_002637343.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224468072|gb|ACN45902.1| cystine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 266 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 50/268 (18%), Positives = 95/268 (35%), Gaps = 18/268 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + ++ + ++ S + A +L +K+RG L G+ F+ +G GF+ Sbjct: 8 RQALMGVMAVALVAGMSAKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGEDGKLTGFE 67 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDF AL+ + K P +L SK+ID++ + +R+ Sbjct: 68 VDFAEALAKHLG---VKASLKPTKWDGMLASLDSKRIDVVINQVTISDVRKKKYDF--ST 122 Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G ++ K I + + L G + V GT ++ + H ++ Sbjct: 123 PYTVSGVQALVKKGNEGTIKTAADLQGKKVGVGLGT----NYEEWLRQHVQGVDIRTYDD 178 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R R DA D L AL L + D S+ A+ +G+ + Sbjct: 179 DPTKYQDLRVGRIDAILVDR--LAALDLVKKTKGTLAVTGDAFSRQESGVALRKGNEDLL 236 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSK 266 V A+ ++ G + + Sbjct: 237 KAVD---NAIAEMQKDGTLKALSEKWFG 261 >gi|254832441|ref|ZP_05237096.1| amino acid ABC transporter (binding protein) [Listeria monocytogenes 10403S] gi|255017462|ref|ZP_05289588.1| amino acid ABC transporter (binding protein) [Listeria monocytogenes FSL F2-515] Length = 271 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 41/273 (15%), Positives = 98/273 (35%), Gaps = 14/273 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILG---DIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K ++++ +++L + S++ S IKK + G++ V + + Sbjct: 1 MKKGLLITVMLMVMLALGACSSSESKEDQWSRIKKDKEVVIGLDDSFVPMGFRDKDDNLV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D +A+ + K ++ P++ + L++ ID++ T R+ + + Sbjct: 61 GFDIDLAKAVFAEYG---IKAKFTPIDWTMKESELKNGSIDLIWNGYTVTDARKKQVAFS 117 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH---PI 174 + Q + K I+ S + ++ Q G ++ +A + + P Sbjct: 118 Q--PYMKNEQVLVTLKSSNINQFSDMKNKTLGAQNGASSIDDMAKKPEVLTDIINNNEPE 175 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +++ + R D D ++ I+ + A + + D Sbjct: 176 LYDTFDTAFIDLNNKRIDGLIIDEVYARYYIDKQKNKGDYNIITGGFDATDFAVGMRKSD 235 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 E + + A + G Q+ + D Sbjct: 236 KELQ---TKINEAFEKLYKEGKMQEISKKWFGD 265 >gi|324007275|gb|EGB76494.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 57-2] Length = 266 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 47/272 (17%), Positives = 92/272 (33%), Gaps = 17/272 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + ++ + ++ S + A +L +K+RG L G+ F+ +G GF+ Sbjct: 8 RQALMGVMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFE 67 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F + L+ + + S P +L SK+ID++ + R+ Sbjct: 68 VEFAQQLAKHLGVEAS---LKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDF--ST 122 Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G ++ K I + L + V GT ++ + + ++ Sbjct: 123 PYTISGIQALVKKGNEGTIKTADDLKDKKVGVGLGT----NYEEWLRQNVQGVDVRTYDD 178 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R R DA D L AL L + + S+ A+ +G+ + Sbjct: 179 DPTKYQDLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLL 236 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 V+ M L + D T Sbjct: 237 KAVNDAIAEMQKDGTLQALSE--KWFGADVTK 266 >gi|305680314|ref|ZP_07403122.1| bacterial extracellular solute-binding protein, family 3 [Corynebacterium matruchotii ATCC 14266] gi|305659845|gb|EFM49344.1| bacterial extracellular solute-binding protein, family 3 [Corynebacterium matruchotii ATCC 14266] Length = 333 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 47/243 (19%), Positives = 88/243 (36%), Gaps = 18/243 (7%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 +I RG L GI+ + G+ +GF+VD + +++ IF DP+KI++ +++ Sbjct: 81 EIISRGRLIVGIDQSQNLLSFRNTITGELQGFEVDIAKEIAADIFGDPTKIEFRYVDSAN 140 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 +L+S QID+ R T R+ + F ++HK I +S++ G Sbjct: 141 WIDSLESHQIDMAIRTLSIT--RDRQDQVFFSTPYLKGSTKILVHKSSAIKGISEIGGRP 198 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 +CV + +T Y + +V + + ++ A D L + Sbjct: 199 VCVTSQSTGI----HYARNLAPTSDLVVVRSSADCLIVMQQNQASAVITDDVILSGMSAQ 254 Query: 208 NDRPSEHVILPDIISKSPLA-----PAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 + I +S P ++ T + G QK N Sbjct: 255 DP---FTTIEGGSLSNENYGIATAKPGYRHHTDGLIRQINATLERIYG---DGTWQKYYN 308 Query: 263 QVS 265 Sbjct: 309 HWF 311 >gi|158426031|ref|YP_001527323.1| putative ABC transporter periplasmic solute-binding protein [Azorhizobium caulinodans ORS 571] gi|158332920|dbj|BAF90405.1| putative ABC transporter periplasmic solute-binding protein [Azorhizobium caulinodans ORS 571] Length = 271 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 40/244 (16%), Positives = 84/244 (34%), Gaps = 11/244 (4%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 + +A + DI + L G+ L F + A G +G+D D + + + + ++ Sbjct: 29 HAASAQSIDDILSKKKLTIGMLVDLPPFGLLDAQGKPEGYDADVAKLMGKYLGVE---VE 85 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ R L + ++D L T R + + + KK + + Sbjct: 86 IVPVTGPNRIPYLLTNKVDALVATFGITPERAKQVQFSIPYSAI--EIQLLGPKKLDVKT 143 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + Q G I V +T + L + F+ A+ + + D + Sbjct: 144 LDQTVGKKIAVARASTQDTALTAAVPK---GATIMRFDDDATAAQAFISGQTDLLGSNNV 200 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQ 258 +L P + ++ + +G T++ ++ Y + EL I Q Sbjct: 201 I--GAQLAEANPDMGIERKIVLRSQYNGITVRRGSTDFLQWINTFLYFVKNNGELDAINQ 258 Query: 259 KNIN 262 K Sbjct: 259 KWFK 262 >gi|156933484|ref|YP_001437400.1| cystine transporter subunit [Cronobacter sakazakii ATCC BAA-894] gi|156531738|gb|ABU76564.1| hypothetical protein ESA_01302 [Cronobacter sakazakii ATCC BAA-894] Length = 266 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 51/268 (19%), Positives = 98/268 (36%), Gaps = 18/268 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + ++ + ++ S T A+ +L +K+RG L G+ F+ +G GF+ Sbjct: 8 RQALMGVMAVALVAGMSVKTYAAENLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFE 67 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F AL+ + K P +L SK+ID++ + R+ Sbjct: 68 VEFAEALAKHLG---VKASLKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDF--ST 122 Query: 121 ITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G ++ K I + + L G + V GT ++ + + ++ Sbjct: 123 PYTVSGIQALVKKENADSIKTAADLKGKKVGVGLGT----NYEEWLRQNVQGVDIRTYDD 178 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R R DA D L AL L + + S+ AI +G+ ++ Sbjct: 179 DPTKYQDLRVGRIDAILVDR--LAALDLVKKTNNTLAAAGEPFSRQEAGVAIRKGNDDFV 236 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSK 266 V A+V ++ G +K + Sbjct: 237 KAVD---NAIVEMQKDGTLKKISEKWFG 261 >gi|157156974|ref|YP_001463224.1| cystine transporter subunit [Escherichia coli E24377A] gi|157079004|gb|ABV18712.1| cystine-binding periplasmic protein [Escherichia coli E24377A] gi|320198614|gb|EFW73214.1| Cystine ABC transporter, periplasmic cystine-binding protein FliY [Escherichia coli EC4100B] Length = 266 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 47/272 (17%), Positives = 94/272 (34%), Gaps = 17/272 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + ++ + ++ S + A +L +K+RG L G+ F+ +G GF+ Sbjct: 8 RQALMGVMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFE 67 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F + L+ + + S P +L SK+ID++ + R+ Sbjct: 68 VEFAQQLAKHLGVEAS---LKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDF--ST 122 Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G ++ K + + + L G + V GT ++ + + ++ Sbjct: 123 PYTISGIQALVKKGNEGTLKTAADLKGKKVGVGLGT----NYEEWLRQNVQGVDVRTYDD 178 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R R DA D L AL L + + S+ A+ +G+ + Sbjct: 179 DPTKYQDLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLL 236 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 V+ M L + D T Sbjct: 237 KAVNDAIAEMQKDGTLQALSE--KWFGADVTK 266 >gi|227514519|ref|ZP_03944568.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus fermentum ATCC 14931] gi|227087076|gb|EEI22388.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus fermentum ATCC 14931] Length = 285 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 52/292 (17%), Positives = 110/292 (37%), Gaps = 26/292 (8%) Query: 1 MYKDFFVSILCLIIL---------FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK 51 M + ++ +L L+++ T + I+KRG + G++ V + Sbjct: 1 MKRLKYLFVLVLLVIPAVLLSGCESVTQRAGTQDTWSRIEKRGKVIVGLDDSFVPMGFRE 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 +G G+D+D +A+ K+ + ++ + L++ ID++ T R Sbjct: 61 RDGKLVGYDIDLAKAVFKQYG---IKVDFQTIDWSMKETELKNGTIDLIWNGYSMTPERA 117 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 + + + Q + K+ I++ + + G + VQ G+T L +Y K K Sbjct: 118 KQVAFSR--PYLLNRQVLVTKKRDHINNFNDMKGKVLGVQNGSTGMTDLDEYPKLLKDKI 175 Query: 172 H---PIVFERVEEIDAAYRAHRCDAYTGD-ISALYALKLTNDRPSEHVILPDIISKSPLA 227 PI+++ A+R D + A Y ++ + S + + + A Sbjct: 176 KGKSPILYDTFPNAFIDLNANRIQGILMDEVYANYYIQHQANAKSYSTYISNKMGADYFA 235 Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGI 279 + +GD V+ + +E G +K + +N FLG Sbjct: 236 VGMRKGDKTLKKKVN---EGLKRLQEDGQLKKINEKWFGKASN-----FLGP 279 >gi|168234124|ref|ZP_02659182.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168822994|ref|ZP_02834994.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194470856|ref|ZP_03076840.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197264655|ref|ZP_03164729.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|200389342|ref|ZP_03215953.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|194457220|gb|EDX46059.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197242910|gb|EDY25530.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|199601787|gb|EDZ00333.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205331855|gb|EDZ18619.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205340677|gb|EDZ27441.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320085428|emb|CBY95209.1| Cystine-binding periplasmic protein CBP; Protein fliY; Sulfate starvation-induced protein 7; SSI7; Flags: Precursor [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|322616947|gb|EFY13855.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322618187|gb|EFY15079.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625857|gb|EFY22676.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322626309|gb|EFY23119.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322632724|gb|EFY29469.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322639066|gb|EFY35759.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322640507|gb|EFY37160.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322649895|gb|EFY46316.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322655503|gb|EFY51811.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322660281|gb|EFY56519.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322662962|gb|EFY59169.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668147|gb|EFY64306.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674093|gb|EFY70187.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675554|gb|EFY71628.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322683034|gb|EFY79050.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686728|gb|EFY82706.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323195383|gb|EFZ80563.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323199274|gb|EFZ84369.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204439|gb|EFZ89445.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207529|gb|EFZ92477.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323211854|gb|EFZ96685.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217514|gb|EGA02233.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323219589|gb|EGA04073.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323223592|gb|EGA07907.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323231536|gb|EGA15649.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235979|gb|EGA20058.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240549|gb|EGA24592.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323245441|gb|EGA29441.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323250211|gb|EGA34103.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323253978|gb|EGA37802.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323255495|gb|EGA39256.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262092|gb|EGA45655.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266215|gb|EGA49705.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270676|gb|EGA54117.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 266 Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 95/268 (35%), Gaps = 18/268 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + ++ + ++ S + A +L +K+RG L G+ F+ +G GF+ Sbjct: 8 RQALMGVMAVALVAGMSAKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGEDGKLTGFE 67 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDF AL+ + K P +L +K+ID++ + +R+ Sbjct: 68 VDFAEALAKHLG---VKASLKPTKWDGILASLDAKRIDVVINQVTISDVRKKKYDF--ST 122 Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G ++ K I + + L G + V GT ++ + H ++ Sbjct: 123 PYTVSGVQALVKKGNEGTIKTAADLQGKKVGVGLGT----NYEEWLRQHVQGVDIRTYDD 178 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R R DA D L AL L + D S+ A+ +G+ + Sbjct: 179 DPTKYQDLRVGRIDAILVDR--LAALDLVKKTKGTLAVTGDAFSRQESGVALRKGNEDLL 236 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSK 266 V A+ ++ G + + Sbjct: 237 KAVD---NAIAEMQKDGTLKALSEKWFG 261 >gi|111223729|ref|YP_714523.1| putative transporter substrate-binding protein [Frankia alni ACN14a] gi|111151261|emb|CAJ62973.1| Putative transporter substrate-binding protein (partial) [Frankia alni ACN14a] Length = 272 Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 54/262 (20%), Positives = 95/262 (36%), Gaps = 29/262 (11%) Query: 24 ASILGDIKK-RGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPS---KI 78 S + I + RG+L+ GI T + +GFDV RA+++AIF I Sbjct: 4 GSRMRAIAQVRGYLRVGIVTDAPPAGLMNWRTLRLEGFDVGIARAVAAAIFGPDDVDDHI 63 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 Q+ + ER L+S +D+L T R+ + + Y ++ ++ G + Sbjct: 64 QFRAVTTSEREDLLRSNMVDMLVATMTITCERKRQVRF--SSVYYESTLRLLVRQEAGFT 121 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 ++ L+G +C AG+T LA + R+ + A + DA GD Sbjct: 122 GIADLAGRPVCTSAGSTASEKLARLPT---PAPRVVTRSRIADCLVALQHGDVDAIVGDD 178 Query: 199 SALYALKLTNDRPSEHVILPDIIS---------KSPLAPAII-----QGDTEWYNIVSWT 244 L L P V+ P P A+ GD + V+ Sbjct: 179 VLLAGLAAQ--DPYTTVLGPQAFGAAFAAGGRLDEPYGIAMPITGDTAGDDGFVAFVNGV 236 Query: 245 HYAMVTAEELGITQKNINQVSK 266 ++ G + ++ + Sbjct: 237 LRQIML---DGTWSRLYDEWLR 255 >gi|254386082|ref|ZP_05001396.1| glutamate binding periplasmic protein [Streptomyces sp. Mg1] gi|194344941|gb|EDX25907.1| glutamate binding periplasmic protein [Streptomyces sp. Mg1] Length = 279 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 39/245 (15%), Positives = 80/245 (32%), Gaps = 8/245 (3%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 K+ + GI G +G + GFDVD ++ + P +I++ + ER Sbjct: 36 KKDKVVIGIKFDQPGVGLKTPDGKFTGFDVDVATYVAKELGYTPEQIEFKQAISAERENL 95 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICV 150 + + + + + R+ + A + Q ++ I+ L+ +C Sbjct: 96 ISNGDVKFVVASYSINDKRKEKVDFA--GPYFLAHQDLLVRSDDNSITKPEDLNSKKLCS 153 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 G+T+ + + E + DA T D S L Sbjct: 154 VTGSTSAQNIK---TKLAPEADLKQSAGYSECLTGLESKSMDALTTDNSILAGYAAQEKN 210 Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE-LGITQKNINQV-SKDT 268 + ++ +S + +GD E ++ MV +KN+ K+ Sbjct: 211 KGKFKLVGLNLSNENYGIGLKKGDKELQTKINAALKKMVADGAWEAAVKKNLGPADYKNE 270 Query: 269 TNPDV 273 P + Sbjct: 271 PAPQI 275 >gi|91783311|ref|YP_558517.1| polar amino acid ABC transporter periplasmic ligand-binding protein [Burkholderia xenovorans LB400] gi|91687265|gb|ABE30465.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia xenovorans LB400] Length = 264 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 57/273 (20%), Positives = 104/273 (38%), Gaps = 21/273 (7%) Query: 3 KDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K V+ LI FT+ + +A +L +K+RG L+ G+ F +G+ G+DV Sbjct: 7 KKILVA--GLIGASFTAVTAHADDLLDQVKQRGTLRIGLEGTFPPFNSKAPSGELVGYDV 64 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D +A+++ + P +++ LQ+ + D++ T R+ +L P Sbjct: 65 DIAKAVAAKLGVKP---EFVTTEWSGIIAGLQAGKFDVIVNQVGITDARKQALDF--SPA 119 Query: 122 TYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + I K S+ L G + V G T + +A ++K +P Sbjct: 120 YTYSAAQLIQRKDDTRQFKSLEDLKGKKLGVGLG-TNYMDMAKSVPGIDVKTYPGA---- 174 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A R DA D L L + P ++ + +P +G+ ++ Sbjct: 175 PEYLRDLAAGRLDAALNDRLMLAYLMKNSPLP--LRTGANVGAGNPSGIPFRKGNPKFAK 232 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSK-DTTNP 271 + AM E G K ++ D + P Sbjct: 233 AIDD---AMTQLEADGTFSKISDKWFGIDVSKP 262 >gi|307289499|ref|ZP_07569445.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX0109] gi|306499517|gb|EFM68888.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX0109] Length = 273 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 52/279 (18%), Positives = 98/279 (35%), Gaps = 17/279 (6%) Query: 1 MYKDFFVSIL--CLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + +++L C +L F +N I + + G++ V +G Sbjct: 2 MKKKYSLALLVICCSLLLFAGCGKRKSNEDQWTRINEEKRIIIGLDDSFVPMGFQDKSGK 61 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFDVD +A+ + + P++ + LQ++ ID++ T R + Sbjct: 62 IVGFDVDLAKAVFKLYGIS---VDFQPIDWSMKETELQNQTIDLIWNGYTKTSERAEKVQ 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYH 172 + Q + K+K +++ S + G + VQ G++ D K Sbjct: 119 FTQ--PYMTNDQVLVSLKEKNVATASDMQGKILGVQNGSSGYDGFESQPDVLKKFVKDQT 176 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 PI+++ E ++ R D D D + I A + + Sbjct: 177 PILYDGFNEAFLDLKSGRIDGLLIDRVYANYYLSHEDNLKNYTISHVGYDNEDFAVGVRK 236 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQK-NINQVSKDTTN 270 D + V + A T + G K + +D TN Sbjct: 237 SDNQL---VQKINTAFETLRKDGTLSKISQKWFGEDVTN 272 >gi|295095483|emb|CBK84573.1| L-cystine-binding protein/Diaminopimelate-binding protein [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 266 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 48/266 (18%), Positives = 88/266 (33%), Gaps = 15/266 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 + + L+ ++L +K+RG L G+ F+ +G GF+V+F + Sbjct: 14 MMAVALVAGMSVKTFAAENLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQE 73 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + K P +L SK+ID++ + R+ G Sbjct: 74 LAKHLG---VKASLKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDF--STPYTVSG 128 Query: 127 QGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K I S + L G + V GT ++ + + ++ Sbjct: 129 IQALVKKGNEGSIKSAADLKGKKVGVGLGT----NYEEWLRQNVQGVDIRTYDDDPTKYQ 184 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 R R DA D L AL L + + D S+ A+ +G+ + + Sbjct: 185 DLRVGRIDAILVDR--LAALDLVKKTNNTLAVAGDAFSRQESGVAVRKGNEDLLKAIDGA 242 Query: 245 HYAMVTAEELGITQKNINQVSKDTTN 270 M L + D T Sbjct: 243 IAEMQKDGSLKALSE--KWFGADVTK 266 >gi|219670748|ref|YP_002461183.1| extracellular solute-binding protein family 3 [Desulfitobacterium hafniense DCB-2] gi|219541008|gb|ACL22747.1| extracellular solute-binding protein family 3 [Desulfitobacterium hafniense DCB-2] Length = 269 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 50/276 (18%), Positives = 86/276 (31%), Gaps = 25/276 (9%) Query: 1 MYKDF---FVSILCLIILFFTSFSTNASI--LGDIKKRG-------FLKCGINTGLVGFA 48 M K ++++ + +L T N S D G LK G F Sbjct: 1 MKKSLRNGIIAVVMMGLLALTGCGGNQSQPPANDGANNGANGGEEKVLKIGSAIEYAPFE 60 Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + GFD+D ++ + ++ + A+ + D + T Sbjct: 61 FMDEKQTPTGFDIDLMNEIAKDLGYTA---KFESSSFDGLVAAIGLGKYDAVISAMTITD 117 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168 R S+ + Q + K I S L G + VQ GTT + + D Sbjct: 118 DRAKSVLF--SDPYFESAQIIAVKKGSAIKSEQDLKGKKVGVQQGTTGQFAVEDL----- 170 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 P F+ + + +A D LY N + I+P K Sbjct: 171 -GIDPRKFDTIGDAINDMMIGGSEAVVADTPTLYYFITQNPN-MDIEIIPSAFEKEYFGI 228 Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELG-ITQKNINQ 263 A + E + V+ T + + I +K N+ Sbjct: 229 AFKLDNKELADQVNATLKKFMDNGKYNEIYKKWFNE 264 >gi|296131957|ref|YP_003639204.1| extracellular solute-binding protein family 3 [Thermincola sp. JR] gi|296030535|gb|ADG81303.1| extracellular solute-binding protein family 3 [Thermincola potens JR] Length = 274 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 40/242 (16%), Positives = 83/242 (34%), Gaps = 9/242 (3%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 +K++G G++ G+ GFDVD + ++S + K++ P+N Sbjct: 38 EKVKEKGEFVLGLDENFPPMGFRDEKGEIVGFDVDVAKEVTSRLG---VKLKLQPINWDA 94 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 + L + ID + T R+ ++ + Q I+ ++++ L+G Sbjct: 95 KEQELNTGNIDAIWNGFTITEDRKQNVLF--SKPYMKNRQVIIVMNNSNFTNLADLAGKK 152 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 + +QAG++ LA + F+ DA D Sbjct: 153 LGLQAGSSAADALAGAKDFKAKLGEVVEFDDNMTALMDLEKGGIDAVLMDEIVARYYITM 212 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 ++ + +L + ++ + D + + T AM +L KD Sbjct: 213 KNK--GYKVLDEALASEEYGIGFRKNDKQLMEKIQRTLEAMAKDGKLAEIST--KWFGKD 268 Query: 268 TT 269 T Sbjct: 269 IT 270 >gi|110800274|ref|YP_695974.1| amino acid ABC transporter, amino acid-binding protein [Clostridium perfringens ATCC 13124] gi|110674921|gb|ABG83908.1| amino acid ABC transporter, amino acid-binding protein [Clostridium perfringens ATCC 13124] Length = 262 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 45/246 (18%), Positives = 91/246 (36%), Gaps = 12/246 (4%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 ++ + K + GI+ V GD GFDVD + + K+ + P Sbjct: 22 SSKKIETKKDSNTVIIGIDDTFVPMGFKNEKGDIVGFDVDLSKEAFKRM---NLKVIFQP 78 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 ++ + L + ID++ T RE + + Q + I++++ Sbjct: 79 IDWSMKETELTNGNIDLIWNGYTMTHEREKKVAFTNS--YLKNRQVIVTLSNSNINTLND 136 Query: 143 LSGASICVQAGTTTELTLADYFK--AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L G ++ Q G+++ TL + K P++F+ + A R DA D Sbjct: 137 LKGKTVTTQDGSSSLDTLFERPKLTKSFKNGEPVLFDSFNDCFMDLEAGRSDAVVCDEIL 196 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 ND PS+ +L + + + + + + N++ + + +E G K Sbjct: 197 AQYYIFKND-PSKFHVLTEDLGEESYSIGLRKNS----NLIDHLNKTLEDMKEDGTIAKI 251 Query: 261 INQVSK 266 N+ Sbjct: 252 SNKWFG 257 >gi|229587936|ref|YP_002870055.1| putative ABC transporter substrate-binding protein [Pseudomonas fluorescens SBW25] gi|229359802|emb|CAY46652.1| putative ABC transport system, substrate-binding protein [Pseudomonas fluorescens SBW25] Length = 266 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 58/271 (21%), Positives = 101/271 (37%), Gaps = 13/271 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++L + + A + D +RG LK G V F G GF+ Sbjct: 1 MSKGYCSALLISAVAWIHMGLAQAGAIDDAVRRGALKVGTTPTYVPFEMTDKQGRIVGFE 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + +S A+ + ++ + + E LQ+K+ D++ T R + L + Sbjct: 61 IDLLKVMSQALGVE---LELVTVPYTELVAGLQAKKFDLIGSGMTVTQERNLKLNFSDSF 117 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I +SSV L A I GTT E + A F Sbjct: 118 IVVGQSVVLHPRLLGKVSSVEDLDDASYRIATTEGTTGEAAARRFLGAA----RISSFAT 173 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 EE A DA+ D + L+ S + L + PLA + +GD + Sbjct: 174 PEEGVRQVLAGAADAFIHDAP-YNLIALSRPENSTLLALEQPFTFEPLAFGLKKGD---F 229 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 + ++W ++ + + G + ++ KDT Sbjct: 230 DSLNWINHFLNQVAQDGTYDRLHDKWFKDTD 260 >gi|294085010|ref|YP_003551770.1| polar amino acid uptake family ABC transporter periplasmic substrate-binding protein [Candidatus Puniceispirillum marinum IMCC1322] gi|292664585|gb|ADE39686.1| polar amino acid uptake family ABC transporter, periplasmic substrate-binding protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 301 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 42/237 (17%), Positives = 89/237 (37%), Gaps = 16/237 (6%) Query: 1 MYKDFFVSILCLIILFF-TSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M K + + + F + S + I RG + G+ + ++G Sbjct: 22 MLKKIALGMAAASVAFVPLAVSADGHKCTNDTWNKIMSRGKIVVGVKADYKPWGYRNSDG 81 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G ++D + +++ + + ++ +P+ + R L+ + D+L R + Sbjct: 82 SLVGMEIDMAKDVAAKMGVE---LEMVPVQSSNRMQFLEQGKTDLLIATMSDRQDRREIV 138 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 G+ P Y G + K G++S L G +C + G + + + A I Sbjct: 139 GI-VGPNYYTSGTNVMAPKALGLTSWEDLRGKPVCGKQGAFYNQIVEERYGAQ-----VI 192 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 F E A R +C A+ D S++ L++ + + + +P A A+ Sbjct: 193 AFTGNAEAKQALRDKKCIAWVYDDSSI-GSDLSSGQYDDFEMPLQSEDDNPWALAVP 248 >gi|13472037|ref|NP_103604.1| binding protein component of amino acid ABC transporter [Mesorhizobium loti MAFF303099] gi|14022782|dbj|BAB49390.1| probable binding protein component of amino acid ABC transporter [Mesorhizobium loti MAFF303099] Length = 262 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 55/241 (22%), Positives = 92/241 (38%), Gaps = 14/241 (5%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L +I KRG L+ + T F+ V ANG+ G V+ ++ + KI++L + Sbjct: 24 TLDEITKRGELRVAVQTQGPPFSLVGANGERTGSSVELAELMAKEMG---VKIKFLDFDW 80 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ--L 143 AL S + D+L + TL R + +AF + G + Sbjct: 81 DGLIPALLSGKADLLVADMTPTLAR--GMKVAFTTPYMYTGSTVFTKADSKFKTTEDCKA 138 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 G I V G T E F ++K + + A + D D+SA+ Sbjct: 139 KGTKIAVLLGATGEKEAKTAFPDADIKSYKGGG---PLLLDAVNNGQADCGVNDVSAVKG 195 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 I+PD++SK PLA A + +++ W + + G QKN++ Sbjct: 196 QSTAYPA-GSFTIMPDLLSKEPLAFATRYDEP---DLLVWMNLFLNQVTIDGRLQKNLDY 251 Query: 264 V 264 Sbjct: 252 W 252 >gi|301050725|ref|ZP_07197584.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 185-1] gi|300297593|gb|EFJ53978.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 185-1] Length = 266 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 48/272 (17%), Positives = 92/272 (33%), Gaps = 17/272 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + ++ + ++ S + A +L +K+RG L G+ F +G GF+ Sbjct: 8 RQALMGVMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFNFQGDDGKLTGFE 67 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F + L+ + + S P +L SK+ID++ + R+ Sbjct: 68 VEFAQQLAKHLGVEAS---LKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDF--ST 122 Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G ++ K I + L G + V GT ++ + + ++ Sbjct: 123 PYTISGIQALVKKGNEGTIKTADDLKGKKVGVGLGT----NYEEWLRQNVQGVDVRTYDD 178 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R R DA D L AL L + + S+ A+ +G+ + Sbjct: 179 DPTKYQDLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLL 236 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 V+ M L + D T Sbjct: 237 KAVNDAIAEMQKDGTLQALSE--KWFGADVTK 266 >gi|89897621|ref|YP_521108.1| hypothetical protein DSY4875 [Desulfitobacterium hafniense Y51] gi|89337069|dbj|BAE86664.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 269 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 50/276 (18%), Positives = 86/276 (31%), Gaps = 25/276 (9%) Query: 1 MYKDF---FVSILCLIILFFTSFSTNASI--LGDIKKRG-------FLKCGINTGLVGFA 48 M K ++++ + +L T N S D G LK G F Sbjct: 1 MKKSLRNGIIAVVMMGLLALTGCGGNQSQPPANDGANNGANGGEEKVLKIGSAIEYAPFE 60 Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + GFD+D ++ + ++ + A+ + D + T Sbjct: 61 FMDEKQTPTGFDIDLMNEIAKDLGYTA---KFESSSFDGLVAAIGLGKYDAVISAMTITD 117 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168 R S+ + Q + K I S L G + VQ GTT + + D Sbjct: 118 DRAKSVLF--SAPYFESAQIIAVKKGSAIKSEQDLKGKKVGVQQGTTGQFAVEDL----- 170 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 P F+ + + +A D LY N + I+P K Sbjct: 171 -GIDPRKFDTIGDAINDMMIGGSEAVVADTPTLYYFITQNPN-MDIEIIPSAFEKEYFGI 228 Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELG-ITQKNINQ 263 A + E + V+ T + + I +K N+ Sbjct: 229 AFKLDNKELADQVNATLKKFMDNGKYNEIYKKWFNE 264 >gi|227833320|ref|YP_002835027.1| glutamate ABC transport system, solute-binding protein [Corynebacterium aurimucosum ATCC 700975] gi|262184304|ref|ZP_06043725.1| glutamate ABC transport system, solute-binding protein [Corynebacterium aurimucosum ATCC 700975] gi|227454336|gb|ACP33089.1| glutamate ABC transport system, solute-binding protein [Corynebacterium aurimucosum ATCC 700975] Length = 294 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 41/253 (16%), Positives = 87/253 (34%), Gaps = 14/253 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS-- 76 S S +L I + G + G G + +G G DVD + + I D Sbjct: 31 SASGGDGLLASI-ESGSVTLGTKFDQPGLGLREGDGSMTGLDVDVATYVVNHIAKDKGWE 89 Query: 77 --KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 +I++ + +R +++ ++D+++ R + A P + Sbjct: 90 EPEIEWRETPSAQRETLIENGEVDLIAATYSINASRAEKVNFAG-PYLITHQALLTQNDN 148 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 K I+ + L G +C G+T + + + ++ A DA Sbjct: 149 KDITGLEGLDGKILCSVTGSTPAQKVKEALPS----VQLQEYDTYSSCVEALSQGNVDAM 204 Query: 195 TGDISALYALKLTNDRPSEHVIL---PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 T D + L N + V L + + + D E + ++ + ++ Sbjct: 205 TTDATILNGYAAQNPGKFQVVELEKDGKPFTDEYYGVGLKKDDQEATDAINKALEELHSS 264 Query: 252 EEL-GITQKNINQ 263 E + KN+++ Sbjct: 265 GEFDKLVSKNLDK 277 >gi|16760900|ref|NP_456517.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29141408|ref|NP_804750.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|167552818|ref|ZP_02346569.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|168244801|ref|ZP_02669733.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168259762|ref|ZP_02681735.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|194444067|ref|YP_002041219.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194448487|ref|YP_002046005.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|198244762|ref|YP_002215132.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205352351|ref|YP_002226152.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207856532|ref|YP_002243183.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213053509|ref|ZP_03346387.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213426352|ref|ZP_03359102.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213616254|ref|ZP_03372080.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213650341|ref|ZP_03380394.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213855801|ref|ZP_03384041.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|289824076|ref|ZP_06543674.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25296353|pir||AD0750 cystine-binding periplasmic protein precursor [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16503197|emb|CAD05703.1| cystine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Typhi] gi|29137035|gb|AAO68599.1| cystine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|194402730|gb|ACF62952.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194406791|gb|ACF67010.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197939278|gb|ACH76611.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205272132|emb|CAR36985.1| cystine-binding periplasmic protein (FliY) [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205322644|gb|EDZ10483.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205336345|gb|EDZ23109.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205350934|gb|EDZ37565.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206708335|emb|CAR32638.1| cystine-binding periplasmic protein (FliY) [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|326622881|gb|EGE29226.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326627401|gb|EGE33744.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 266 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 50/268 (18%), Positives = 95/268 (35%), Gaps = 18/268 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + ++ + ++ S + A +L +K+RG L G+ F+ +G GF+ Sbjct: 8 RQALMGVMAVALVAGMSAKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFE 67 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDF AL+ + K P +L SK+ID++ + +R+ Sbjct: 68 VDFAEALAKHLG---VKASLKPTKWDGMLASLDSKRIDVVINQVTISDVRKKKYDF--ST 122 Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G ++ K I + + L G + V GT ++ + H ++ Sbjct: 123 PYTVSGVQALVKKGNEGTIKTAADLQGKKVGVGLGT----NYEEWLRQHVQGVDIRTYDD 178 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R R DA D L AL L + D S+ A+ +G+ + Sbjct: 179 DPTKYQDLRVGRIDAILVDR--LAALDLVKKTKGTLAVTGDAFSRQESGVALRKGNEDLL 236 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSK 266 V A+ ++ G + + Sbjct: 237 KAVD---NAIAEMQKDGTLKALSEKWFG 261 >gi|313650137|gb|EFS14550.1| cystine-binding periplasmic protein [Shigella flexneri 2a str. 2457T] Length = 266 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 47/272 (17%), Positives = 93/272 (34%), Gaps = 17/272 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + ++ + ++ S + A +L +K+ G L G+ F+ +G GF+ Sbjct: 8 RQALMGVMAVALVAGMSVKSFADEGLLNKVKESGTLLVGLEGTYPPFSFQGDDGKLTGFE 67 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F + L+ + + S P +L SK+ID++ + R+ Sbjct: 68 VEFAQQLAKHLGVEAS---LKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDF--ST 122 Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G ++ K I + + L G + V GT ++ + + ++ Sbjct: 123 PYTISGIQALVKKGNEGTIKTAADLKGKKVGVGLGT----NYEEWLRQNVQGVDVRTYDD 178 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R R DA D L AL L + + S+ A+ +G+ + Sbjct: 179 DPTKYQDLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLL 236 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 V+ M L + D T Sbjct: 237 KAVNDAIAEMQKDGTLQALSE--KWFGADVTK 266 >gi|256830362|ref|YP_003159090.1| extracellular solute-binding protein family 3 [Desulfomicrobium baculatum DSM 4028] gi|256579538|gb|ACU90674.1| extracellular solute-binding protein family 3 [Desulfomicrobium baculatum DSM 4028] Length = 270 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 46/273 (16%), Positives = 96/273 (35%), Gaps = 19/273 (6%) Query: 1 MYKDFFVSILCLIILFFT----SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 MY+ + I+CL + S + S+L + +RG L+ G +T V +A NGD+ Sbjct: 1 MYRITAILIVCLSLSAGFMPRESSAAEKSVLDQVMERGVLRVGFDT-FVPWAMKDKNGDY 59 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GF++D R +++ + + I+ +P AL + + DI+ R + + Sbjct: 60 IGFEIDVARKVAADMGVE---IELVPTKWSGIIPALLTGKFDIIIGGMGIQPSRNLKVNF 116 Query: 117 AFRPITYFDGQGFIM--HKKKGISSVSQLSGASIC--VQAGTTTELTLADYFKAHNMKYH 172 F G + +SS+ + I + G ++ + Sbjct: 117 --SSPYEFSGMSLVASIAAAPNLSSLDDFNKPEIILSAKTGASSVAAAKKHIPKA----T 170 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 +F+ + R A + N + + ++ P+ A+ + Sbjct: 171 VRMFDDEAQALQEVLNGRAHAMVASAPFPEQQAIRNKDTLYLPLQGETFAQEPIGFAVRK 230 Query: 233 GDTEWYNIV-SWTHYAMVTAEELGITQKNINQV 264 GD ++ N + +W A + Sbjct: 231 GDHDFLNFLNNWVLVAGTEGWLAERYAYWFKTM 263 >gi|315303605|ref|ZP_07874149.1| amino acid ABC transporter, amino acid-binding protein [Listeria ivanovii FSL F6-596] gi|313628025|gb|EFR96614.1| amino acid ABC transporter, amino acid-binding protein [Listeria ivanovii FSL F6-596] Length = 271 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 41/273 (15%), Positives = 94/273 (34%), Gaps = 14/273 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILG---DIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K ++++ +I + ++ S IKK + G++ V + Sbjct: 1 MKKGLLIAVIAIISFTLVACGSSESKEDQWNRIKKDKEVVIGLDDSFVPMGFRDKEDNLV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D +A+ + K+++ P++ + L++ ID++ T R+ + Sbjct: 61 GFDIDLAKAVFAEYG---IKVKFTPIDWTMKESELKNGSIDLIWNGYTVTDARKKKVAF- 116 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPI 174 + Q + K I+ S + ++ Q G ++ +A + P Sbjct: 117 -SNPYMKNEQVLVTLKSSNINKFSDMKDKTLGAQNGASSIDDMAKKPEVLTDIITNNEPE 175 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +++ + R D D ++ I+ + A + + D Sbjct: 176 LYDTFDVAFIDLNNKRIDGLIIDEVYARYYIDKQKNKDDYNIVTGGFDATDFAVGMRKSD 235 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 + V+ A T + G Q+ + D Sbjct: 236 KKLQTKVND---AFQTLYKEGKMQEISKKWFGD 265 >gi|332040175|gb|EGI76556.1| extracellular solute-binding protein family 3 [Hylemonella gracilis ATCC 19624] Length = 298 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 53/261 (20%), Positives = 96/261 (36%), Gaps = 19/261 (7%) Query: 7 VSILCLIILFFTSFSTNASIL------GDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59 ++ L +A+ + IK+ G L+ G F+ + +G +GF Sbjct: 27 INAAAFDALIAQGPVASAATIRSNAWASKIKQAGTLRLGGLQTSNLFSLLNEKDGKTRGF 86 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D + ++ I D +K+Q+ + + R L + Q+D++ T R + A Sbjct: 87 DAGLAQLITRYILGDGAKVQFTQVTSSTREQVLINDQVDMVIATYSITPARTEKISFA-- 144 Query: 120 PITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y G ++ K I S + L+G + QAG+T LA Y F+ Sbjct: 145 GPYYSSQAGVLVKANNKTIQSYNDLAGKKVATQAGSTGPTILAQYAPKG----VVQEFQT 200 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +E A R R DAY D + L ++ P ++ + +G Sbjct: 201 HQEALDALRQGRVDAYVTDYTLLLNALSLGTGDAKLAGAP-FGAQDSYGVGLPKGSDG-- 257 Query: 239 NIVSWTHYAMVTAEELGITQK 259 V++ + + E G K Sbjct: 258 --VAFINDFLKKLEADGTWAK 276 >gi|307149990|ref|YP_003885374.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7822] gi|306980218|gb|ADN12099.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7822] Length = 296 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 43/286 (15%), Positives = 109/286 (38%), Gaps = 18/286 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K ++++ L + A L + + G L G T LV A V + G+ Sbjct: 1 MIKTLTLALISLAFTLGVPLKSGAETVLERVARTGTLVVGTATDLVPLAYVNDKNELVGY 60 Query: 60 DVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +D+ L + + +Q++ + + L S+++DI+ N +T R+ + Sbjct: 61 SIDYLNFLKNQLQTQLGRDVTLQFVEVTPTDAIPKLISQEVDIIC-NAAFTWERDKFVDF 119 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + G ++ + SV L+G I + + + Sbjct: 120 SVS--MGLGGTRLLVKGGSQLGSVDSLAGKRIAAIRNSIPAQVIKVLQPKAI----IVNV 173 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDT 235 E ++E + + + D + L + T + + ++P ++ +A + + ++ Sbjct: 174 ESMQEGFDSVKQGKVDGFAASGIVLDGYRQTVSDKNAYQVVPQKPYNREGIACMVPENNS 233 Query: 236 EWYNIVSWTHYAMVTAEELG------ITQKNINQVSKDTTNPDVQR 275 ++ ++V+++ ++ G I ++ + T +P++ R Sbjct: 234 KFLDVVNFSVVRLMQGYLDGEPSSVAIVERWFGKDGIITIDPELIR 279 >gi|254829260|ref|ZP_05233947.1| amino acid ABC transporter [Listeria monocytogenes FSL N3-165] gi|258601672|gb|EEW14997.1| amino acid ABC transporter [Listeria monocytogenes FSL N3-165] Length = 271 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 40/273 (14%), Positives = 98/273 (35%), Gaps = 14/273 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILG---DIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K ++++ +++L + S++ S IKK + G++ V + + Sbjct: 1 MKKGLLITVMLMVMLALGACSSSESKEDQWSRIKKDKEVVIGLDDSFVPMGFRDKDDNLV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D +A+ + K ++ P++ + L++ ID++ T R+ + + Sbjct: 61 GFDIDLAKAVFAEYG---IKAKFTPIDWTMKESELKNGSIDLIWNGYTVTDARKKQVAFS 117 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH---PI 174 + Q + K I+ S + ++ Q G ++ +A + + P Sbjct: 118 Q--PYMKNEQVLVTLKSSNINQFSDMKNKTLGAQNGASSIDDMAKKPEVLTDIINNNEPE 175 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +++ + R D D ++ I+ + A + + D Sbjct: 176 LYDTFDTAFIDLNNKRIDGLIIDEVYARYYIDKQKNKDDYNIITGGFDATDFAVGMRKSD 235 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 + + + A + G Q+ + D Sbjct: 236 KKLQ---TKINEAFEKLYKEGKMQEISKKWFGD 265 >gi|260868512|ref|YP_003234914.1| putative periplasmic binding transport protein FliY [Escherichia coli O111:H- str. 11128] gi|257764868|dbj|BAI36363.1| putative periplasmic binding transport protein FliY [Escherichia coli O111:H- str. 11128] Length = 266 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 47/272 (17%), Positives = 93/272 (34%), Gaps = 17/272 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + ++ + ++ S + A +L +K+RG L G+ F+ +G GF+ Sbjct: 8 RQALMGVMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFE 67 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F + L+ + + S P +L SK+ID++ + R+ Sbjct: 68 VEFAQQLAKHLGVEAS---LKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDF--ST 122 Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G ++ K I + + L G + V GT ++ + + ++ Sbjct: 123 PYTISGIQALVKKGNEGTIKTAADLKGKKVGVGLGT----NYEEWLRQNVQGVDVRTYDD 178 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R R DA D L AL L + + S+ + +G+ + Sbjct: 179 DPTKYQDLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVTLRKGNEDLL 236 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 V+ M L + D T Sbjct: 237 KAVNDAIAEMQKDGTLQALSE--KWFGADVTK 266 >gi|311108047|ref|YP_003980900.1| extracellular solute-binding protein, family 3 family protein 8 [Achromobacter xylosoxidans A8] gi|310762736|gb|ADP18185.1| bacterial extracellular solute-binding protein, family 3 family protein 8 [Achromobacter xylosoxidans A8] Length = 261 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 52/252 (20%), Positives = 101/252 (40%), Gaps = 18/252 (7%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 L D+ G L+ G+ + A G+ G D+D + +++ + K++ + + Sbjct: 25 DKLQDVLGAGKLRVGVLMDAAPWGFKDAKGEAAGLDIDLAKLMAADMG---VKLELVQVT 81 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI---SSVS 141 R +L + ++D+L T R + + + ++ + SV Sbjct: 82 GASRIPSLLAGKVDVLIAAAGATPERAQQVMFSQP----YAAVNLGVYGGDAMPQAKSVD 137 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 +L G SI V G+T ++ L D + FE AAY A + +++ + + Sbjct: 138 ELKGHSIAVAKGSTLDIWLTDNAPGA----KLVRFEDTPSAVAAYLAGQSESFAENSAI- 192 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 ALK+T D P+ L +I +SP A+ QG N ++ + +L Q+ Sbjct: 193 -ALKVTEDNPARAPQLKFLIRQSPAHAAVQQGQQNLLNWINTFLFTNRLNGKLPALQQ-- 249 Query: 262 NQVSKDTTNPDV 273 + T P + Sbjct: 250 KWFKEAQTLPQM 261 >gi|24113297|ref|NP_707807.1| cystine transporter subunit [Shigella flexneri 2a str. 301] gi|24052304|gb|AAN43514.1| similar to periplasmic glutamine-binding protein; permease [Shigella flexneri 2a str. 301] gi|281601362|gb|ADA74346.1| periplasmic glutamine-binding protein; permease [Shigella flexneri 2002017] Length = 285 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 47/272 (17%), Positives = 93/272 (34%), Gaps = 17/272 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + ++ + ++ S + A +L +K+ G L G+ F+ +G GF+ Sbjct: 27 RQALMGVMAVALVAGMSVKSFADEGLLNKVKESGTLLVGLEGTYPPFSFQGDDGKLTGFE 86 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F + L+ + + S P +L SK+ID++ + R+ Sbjct: 87 VEFAQQLAKHLGVEAS---LKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDF--ST 141 Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G ++ K I + + L G + V GT ++ + + ++ Sbjct: 142 PYTISGIQALVKKGNEGTIKTAADLKGKKVGVGLGT----NYEEWLRQNVQGVDVRTYDD 197 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R R DA D L AL L + + S+ A+ +G+ + Sbjct: 198 DPTKYQDLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLL 255 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 V+ M L + D T Sbjct: 256 KAVNDAIAEMQKDGTLQALSE--KWFGADVTK 285 >gi|291548166|emb|CBL21274.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [Ruminococcus sp. SR1/5] Length = 296 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 46/274 (16%), Positives = 90/274 (32%), Gaps = 20/274 (7%) Query: 1 MYKDFFVSILCLII---LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K ++ + + T S A + L G + F NG++ Sbjct: 1 MKKRTVAVVMAAAMTIGMMVTGVSVQAGVEDK-----TLIVGFDAEYPPFGYKDDNGEYV 55 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D + + + + K P+N + + L S ID + Sbjct: 56 GFDLDLAQEVCDNLGWELVK---KPINWDSKDMELNSGTIDCIWNGFTIN---GREDDYT 109 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + + Q ++ K I ++ L G ++ VQA + L + + E Sbjct: 110 WSDPYINNEQVIVVAKDSEIEKLADLKGKNVVVQAASAALDALNNDDNKELKDSFASLTE 169 Query: 178 --RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + DA D + +L+ ++VIL + I +G+ Sbjct: 170 NPDYNTAFMNIDSGAADAVAVD-IGVANYQLSQRGKDKYVILDEPIQNEQYGIGFKKGND 228 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 E ++V + +E G K ++ D + Sbjct: 229 ELKDLV---WDEVKKLDESGEVDKLADKYELDKS 259 >gi|154246379|ref|YP_001417337.1| extracellular solute-binding protein [Xanthobacter autotrophicus Py2] gi|154160464|gb|ABS67680.1| extracellular solute-binding protein family 3 [Xanthobacter autotrophicus Py2] Length = 271 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 59/262 (22%), Positives = 98/262 (37%), Gaps = 18/262 (6%) Query: 1 MYKDFFVSILCLIILFFT--------SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 M K F I + + S +A+ L DI+KRG ++ G+ TG V Sbjct: 1 MRKMFRTFIAAGALALAAAGPLAGLVAGSADATSLSDIQKRGKVRIGVLTGAPPMGMVDE 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 +G G+DVD L +F+ P ++ +P+ R ALQ+ Q+D L T R Sbjct: 61 HGKPAGYDVDVAN-LVGTMFNLP--VELVPVTPPARIPALQTGQVDFLVATLAPTGERAK 117 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 ++ + + K + V L G I V G++ E L +A+ Sbjct: 118 TVMFTTPYSAF--NMVVVSGPGKVYNVVGDLKGKRIAVNRGSSQETALR---RANVPGLE 172 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 +V+E A + + D + AL V P + + A + Sbjct: 173 LVVYEDDATTAQALLSGQVDGTALPSTVAAALLKQMPSAGLQVGQPFF--RQGNSMATLP 230 Query: 233 GDTEWYNIVSWTHYAMVTAEEL 254 GD E + + Y M + +L Sbjct: 231 GDFELLHYLDTLIYLMKVSGQL 252 >gi|199597486|ref|ZP_03210915.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus rhamnosus HN001] gi|199591509|gb|EDY99586.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus rhamnosus HN001] Length = 270 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 40/267 (14%), Positives = 93/267 (34%), Gaps = 13/267 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILG----DIKKRGFLKCGINTGLVGFAEVKANGD 55 M + ++++ + + S A + I++ + G++ V + NG Sbjct: 1 MKRRMIMAVMAFLTMAGIVISGCARETVDNSWPRIERTKKVVIGLDDTFVPMGFRQKNGQ 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G+D+D +A+ K + ++ + L+++ ID++ T R+ + Sbjct: 61 LAGYDIDLAKAVFKRYG---IKADFQTIDWSMKETELKNQTIDLIWNGYSVTPERKAKVA 117 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYH 172 + + Q + K I+++ + G ++ VQ G++ L K Sbjct: 118 FSND--YLINHQILVTKTKSQINTLKDMKGKTLGVQTGSSGAFDLDAQPKLLKNMIANKT 175 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 PI+++ + A R D P+ + I+ D A + + Sbjct: 176 PILYDTFNDAFIDLDAGRIQGILMDEVYARYYIAHKPDPASYHIIGDSFPPEEFAVGMRK 235 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQK 259 D ++ A+ + QK Sbjct: 236 SDHVLREKINAGLKALKADGTIAKLQK 262 >gi|238912473|ref|ZP_04656310.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] Length = 266 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 95/268 (35%), Gaps = 18/268 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + ++ + ++ S + A +L +K+RG L G+ F+ +G GF+ Sbjct: 8 RQALMGVMAVALVAGMSAKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFE 67 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDF AL+ + K P +L +K+ID++ + +R+ Sbjct: 68 VDFAEALAKHLG---VKASLKPTKWDGILASLDAKRIDVVINQVTISDVRKKKYDF--ST 122 Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G ++ K I + + L G + V GT ++ + H ++ Sbjct: 123 PYTVSGVQALVKKGNEGTIKTAADLQGKKVGVGLGT----NYEEWLRQHVQGVDIRTYDD 178 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R R DA D L AL L + D S+ A+ +G+ + Sbjct: 179 DPTKYQDLRVGRIDAILVDR--LAALDLVKKTKGTLAVTGDAFSRQESGVALRKGNEDLL 236 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSK 266 V A+ ++ G + + Sbjct: 237 KAVD---NAIAEMQKDGTLKALSEKWFG 261 >gi|260598415|ref|YP_003210986.1| cystine transporter subunit [Cronobacter turicensis z3032] gi|260217592|emb|CBA31849.1| Cystine-binding periplasmic protein [Cronobacter turicensis z3032] Length = 266 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 98/268 (36%), Gaps = 18/268 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + ++ + ++ S T A+ +L +K+RG L G+ F+ +G GF+ Sbjct: 8 RQALMGVMAVALVAGMSVKTYAAENLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFE 67 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F AL+ + K P +L SK+ID++ + R+ Sbjct: 68 VEFAEALAKHLG---VKASLKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDF--ST 122 Query: 121 ITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G ++ K+ I + + L G + V GT ++ + + ++ Sbjct: 123 PYTVSGIQALVKKENAQSIKTAADLKGKKVGVGLGT----NYEEWLRQNVQGVDIRTYDD 178 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R R DA D L AL L + + S+ A+ +G+ ++ Sbjct: 179 DPTKYQDLRVGRIDAILVDR--LAALDLVKKTNNTLAAAGEPFSRQEAGVAVRKGNDDFV 236 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSK 266 V A+ ++ G +K + Sbjct: 237 KAVD---SAIAEMQKDGTLKKISEKWFG 261 >gi|116748259|ref|YP_844946.1| extracellular solute-binding protein [Syntrophobacter fumaroxidans MPOB] gi|116697323|gb|ABK16511.1| extracellular solute-binding protein, family 3 [Syntrophobacter fumaroxidans MPOB] Length = 268 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 54/281 (19%), Positives = 100/281 (35%), Gaps = 30/281 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTN--------ASILGDIKKRGFLKCGINTGLVGFAEVKA 52 M++ ++ +L + S+L + KR L G+ F Sbjct: 1 MFRKCLSALWVPALLLTCGIAFAVTPFEVFDGSVLNQVIKRNKLMVGMEVKFFPFEYADE 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G GFDV+ + + + ++ + ALQ ++D++ TL R Sbjct: 61 KGRPLGFDVEIAGLAAKELGVE---LEIKDMEFSGLIPALQGGKVDMIISGMTRTLTRAK 117 Query: 113 SLGLAFRPITYFDGQGFIM----HKKKGISSVSQLS--GASICVQAGTTTELTLADYFKA 166 ++ YF+ G + + V +L+ G I V+ GTT +L A F Sbjct: 118 TVSFTQA---YFE-TGLCALLSNRRAPDVKDVKELNAPGRVIAVKLGTTGDLVTAKMFPE 173 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + V E+ R DA+ D L K + P + + P Sbjct: 174 AQVNRYKEETACVREVVT----GRADAFLYD--QLSIGKHHKENPDTTHAVLTPFTYEPF 227 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 A AI +GD ++ +W + + T + G ++ + D Sbjct: 228 AIAIRKGDPDFL---NWLNQFLETIKADGRYRELHEKHFGD 265 >gi|326204706|ref|ZP_08194561.1| extracellular solute-binding protein family 3 [Clostridium papyrosolvens DSM 2782] gi|325985077|gb|EGD45918.1| extracellular solute-binding protein family 3 [Clostridium papyrosolvens DSM 2782] Length = 294 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 37/254 (14%), Positives = 86/254 (33%), Gaps = 9/254 (3%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 ++ ST +K +G L G++ N + G+D+D + +++ + Sbjct: 46 AVSNTSTGEKSWDKVKDKGELVLGLDENFPPMGFRDGNNNIVGYDIDLAKEVAARLG--- 102 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 K++ P+N + L + ID + R+ ++ + Q ++ Sbjct: 103 VKLKIQPINWDSKDQELNTGNIDCIWNGFSINEERKANILF--SDPYMKNNQVVVVAADS 160 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 +++ L G S+ +QA ++ + + + + D Sbjct: 161 KFKTLADLKGKSVSLQAQSSAADAIDKNTDFKKSLKDVVELKDNTLCLMDLKTGNTDGVV 220 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D N ++ IL + ++ + D + V+ T M A+E Sbjct: 221 MDEIVARYQIKMNS--EKYRILDESLAAEEYGVGFRKADVQLMTKVNDTLKTM--AKEGK 276 Query: 256 ITQKNINQVSKDTT 269 I + + KD + Sbjct: 277 IAEISNVWFGKDIS 290 >gi|254557099|ref|YP_003063516.1| glutamine ABC transporter, substrate binding protein [Lactobacillus plantarum JDM1] gi|254046026|gb|ACT62819.1| glutamine ABC transporter, substrate binding protein [Lactobacillus plantarum JDM1] Length = 279 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 47/282 (16%), Positives = 95/282 (33%), Gaps = 23/282 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA------------SILGDIKKRGFLKCGINTGLVGFA 48 M K F L +++L + + + IKKRG++ G++ V Sbjct: 1 MKKRLFALSLIVVMLLGMATTLSGCGQNVTKRADTQDTWSKIKKRGYVVVGLDDSFVPMG 60 Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + +G G+D+D RA+ KI + ++ L++ ID++ Sbjct: 61 FREKSGKLVGYDIDLARAVFKLYG---IKISFQTIDWSMNATELRNGTIDLIWNGYTKNP 117 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY---FK 165 RE + + Q + KK I+S ++G ++ VQ+G++ +L + K Sbjct: 118 QREKVVAF--SNTYLKNKQVLVSLKKNHINSFDDMTGKTLGVQSGSSGYESLENNPKLLK 175 Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225 K P+ ++ A R D +++ Sbjct: 176 DKIAKKTPVQYDTFTNAFLDLNAGRIKGLFIDSVYASYYIKHEANSADYQETQGTFKSED 235 Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 A + +GD + + T + G K + + Sbjct: 236 FAVGMRKGDKTMK---RKINAGLKTLKANGTLDKINKKWFGN 274 >gi|315159959|gb|EFU03976.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX0312] Length = 277 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 53/279 (18%), Positives = 97/279 (34%), Gaps = 17/279 (6%) Query: 1 MYKDFFVSIL--CLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + +++L C +L F +N I + + G++ V +G Sbjct: 2 MKKKYSLALLVICCSLLLFAGCGKRKSNEDQWTRINEEKRIIIGLDDSFVPMGFQDKSGK 61 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFDVD A+ + + P++ + LQ++ ID++ T R + Sbjct: 62 IVGFDVDLANAVFKLYGIS---VDFQPIDWSMKETELQNQTIDLIWNGYTKTSERAEKVQ 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYH 172 + Q + K+K I++ S + G + VQ G++ D K Sbjct: 119 FTQ--PYMTNDQVLVSLKEKNIATASDMQGKILGVQNGSSGYDGFESQPDILKKFVKDQT 176 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 PI+++ E ++ R D D D + I A + + Sbjct: 177 PILYDGFNEAFLDLKSGRIDGLLIDRVYANYYLSHEDNLKNYTISHVGYDNEDFAVGVRK 236 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQK-NINQVSKDTTN 270 D + V + A T + G K + +D TN Sbjct: 237 SDNQL---VQKINTAFETLRKDGTLSKISQKWFGEDVTN 272 >gi|323186304|gb|EFZ71654.1| cystine-binding periplasmic protein [Escherichia coli 1357] Length = 252 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 47/260 (18%), Positives = 90/260 (34%), Gaps = 16/260 (6%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 + L+ + +L +K+RG L G+ F+ +G GF+V+F + L+ Sbjct: 2 AVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQLA 61 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 + + S P +L SK+ID++ + R+ G Sbjct: 62 KHLGVEAS---LKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDF--STPYTISGIQ 116 Query: 129 FIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 ++ K I + + L G + V GT ++ + + ++ Sbjct: 117 ALVKKGNEGTIKTAADLKGKKVGVGLGT----NYEEWLRQNVQGVDVRTYDDDPTKYQDL 172 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 R R DA D L AL L + + S+ A+ +G+ + V+ Sbjct: 173 RVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVND--- 227 Query: 247 AMVTAEELGITQKNINQVSK 266 AM ++ G Q + Sbjct: 228 AMAEMQKDGTLQALSEKWFG 247 >gi|46907968|ref|YP_014357.1| amino acid ABC transporter, amino acid-binding protein [Listeria monocytogenes str. 4b F2365] gi|217964115|ref|YP_002349793.1| amino acid ABC transporter, amino acid-binding protein [Listeria monocytogenes HCC23] gi|226224341|ref|YP_002758448.1| amino acid ABC transporter (binding protein) [Listeria monocytogenes Clip81459] gi|254826018|ref|ZP_05231019.1| amino acid ABC transporter [Listeria monocytogenes FSL J1-194] gi|254993941|ref|ZP_05276131.1| amino acid ABC transporter (binding protein) [Listeria monocytogenes FSL J2-064] gi|255520512|ref|ZP_05387749.1| amino acid ABC transporter (binding protein) [Listeria monocytogenes FSL J1-175] gi|290893395|ref|ZP_06556380.1| amino acid ABC transporter [Listeria monocytogenes FSL J2-071] gi|46881238|gb|AAT04534.1| amino acid ABC transporter, amino acid-binding protein [Listeria monocytogenes serotype 4b str. F2365] gi|217333385|gb|ACK39179.1| amino acid ABC transporter, amino acid-binding protein [Listeria monocytogenes HCC23] gi|225876803|emb|CAS05512.1| Putative amino acid ABC transporter (binding protein) [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|290557046|gb|EFD90575.1| amino acid ABC transporter [Listeria monocytogenes FSL J2-071] gi|293595257|gb|EFG03018.1| amino acid ABC transporter [Listeria monocytogenes FSL J1-194] gi|307571318|emb|CAR84497.1| amino acid ABC transporter, amino acid-binding protein [Listeria monocytogenes L99] gi|313608294|gb|EFR84286.1| amino acid ABC transporter, amino acid-binding protein [Listeria monocytogenes FSL F2-208] Length = 271 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 41/273 (15%), Positives = 97/273 (35%), Gaps = 14/273 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILG---DIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K ++++ +++L + S+ S IKK + G++ V + + Sbjct: 1 MKKGLLITVMLMVMLALGACSSGESKEDQWSRIKKDKEVVIGLDDSFVPMGFRDKDDNLV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D +A+ + K ++ P++ + L++ ID++ T R+ + + Sbjct: 61 GFDIDLAKAVFAEYG---IKAKFTPIDWTMKESELKNGSIDLIWNGYTVTDARKKQVAFS 117 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH---PI 174 + Q + K I+ S + ++ Q G ++ +A + + P Sbjct: 118 Q--PYMKNEQVLVTLKSSNINQFSDMKNKTLGAQNGASSIDDMAKKPEVLTDIINNNEPE 175 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +++ + R D D ++ I+ + A + + D Sbjct: 176 LYDTFDTAFIDLNNKRIDGLIIDEVYARYYIDKQKNKDDYNIITGGFDATDFAVGMRKSD 235 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 E + + A + G Q+ + D Sbjct: 236 KELQ---TKINEAFEKLYKEGKMQEISKKWFGD 265 >gi|183393066|gb|ACC61695.1| extracellular solute-binding protein family 3 protein [Lactobacillus rhamnosus HN001] Length = 269 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 40/267 (14%), Positives = 93/267 (34%), Gaps = 13/267 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILG----DIKKRGFLKCGINTGLVGFAEVKANGD 55 M + ++++ + + S A + I++ + G++ V + NG Sbjct: 1 MKRRMIMAVMAFLTMAGIVISGCARETVDNSWPRIERTKKVVIGLDDTFVPMGFRQKNGQ 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G+D+D +A+ K + ++ + L+++ ID++ T R+ + Sbjct: 61 LAGYDIDLAKAVFKRYG---IKADFQTIDWSMKETELKNQTIDLIWNGYSVTPERKAKVA 117 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYH 172 + + Q + K I+++ + G ++ VQ G++ L K Sbjct: 118 FSND--YLINHQILVTKTKSQINTLKDMKGKTLGVQTGSSGAFDLDAQPKLLKNMIANKT 175 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 PI+++ + A R D P+ + I+ D A + + Sbjct: 176 PILYDTFNDAFIDLDAGRIQGILMDEVYARYYIAHKPDPASYHIIGDSFPPEEFAVGMRK 235 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQK 259 D ++ A+ + QK Sbjct: 236 SDHVLREKINAGLKALKADGTIAKLQK 262 >gi|269120726|ref|YP_003308903.1| extracellular solute-binding protein family 3 [Sebaldella termitidis ATCC 33386] gi|268614604|gb|ACZ08972.1| extracellular solute-binding protein family 3 [Sebaldella termitidis ATCC 33386] Length = 265 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 41/237 (17%), Positives = 87/237 (36%), Gaps = 15/237 (6%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 + G++ G+ GFD+D +A++ + ++Q+ P+N + + L++ Sbjct: 37 KIIVGLDDTFAPMGFRDEKGELVGFDIDLAKAVAEKLG---IEVQFQPINWDSKEMELKN 93 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 I+++ T R+ L + Q ++ K I + L G I Q+ + Sbjct: 94 GNINLIWNGLSITEERKKQLLF--SVPYLENSQIILVKKDSLIKTKEDLKGKIIGTQSKS 151 Query: 155 TTELT-LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA---LYALKLTNDR 210 + E LAD ++ ++ ++ A R +A GD + A K + Sbjct: 152 SGEDAVLAD--PVNSELKELRTYDTYDQAFLDLDAGRIEAIAGDEVLARFIKANKEKKEG 209 Query: 211 PSEHVIL-PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 + IL K + DT ++ T ++ G +K ++ Sbjct: 210 KELYTILEGSDFGKEEYGIGAKKEDTYLIEKINETIE---ELKKDGTYKKIYDKWFG 263 >gi|325063881|gb|ADY67571.1| amino acid ABC transporter, substrate binding protein [Agrobacterium sp. H13-3] Length = 279 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 43/260 (16%), Positives = 95/260 (36%), Gaps = 12/260 (4%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 V + ++ T A L + K G + GI + + ++G +G+D D Sbjct: 14 IAVGLAAALLPILTPAGAEARTLEEAKSSGKIIIGIQGDNAPWGFINSSGVQEGYDADLA 73 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 R + + K++++PL R +L++ ++D L + T R ++ A Sbjct: 74 RGFADYLG---LKVEFVPLAVANRIPSLRTGKVDALFASMGMTPERAKNVQYAQ--PYAH 128 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 + K K I++ L+G ++ + + L K + F+ Sbjct: 129 NVMSVYATKDKKIANFDDLTGMTVGAPKSSPMDTALTA---GAGTKAKILRFDDDAATIQ 185 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS-W 243 A + + +A G+ Y +L ++ + + + A G+ +W ++ W Sbjct: 186 AILSGQIEAIGGN--QFYGDRLAAAGGKDYEV-KFDLVTLYNSAATRPGEKDWNEALNAW 242 Query: 244 THYAMVTAEELGITQKNINQ 263 A E + K + + Sbjct: 243 LDKAKANGELAKVYAKWMKR 262 >gi|28378894|ref|NP_785786.1| glutamine ABC transporter, substrate binding protein [Lactobacillus plantarum WCFS1] gi|300769713|ref|ZP_07079596.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308181095|ref|YP_003925223.1| glutamine ABC transporter, substrate binding protein [Lactobacillus plantarum subsp. plantarum ST-III] gi|28271731|emb|CAD64637.1| glutamine ABC transporter, substrate binding protein [Lactobacillus plantarum WCFS1] gi|300492756|gb|EFK27941.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308046586|gb|ADN99129.1| glutamine ABC transporter, substrate binding protein [Lactobacillus plantarum subsp. plantarum ST-III] Length = 279 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 47/282 (16%), Positives = 95/282 (33%), Gaps = 23/282 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA------------SILGDIKKRGFLKCGINTGLVGFA 48 M K F L +++L + + + IKKRG++ G++ V Sbjct: 1 MKKRLFALSLIVVMLLGMATTLSGCGQNVTKRADTQDTWSKIKKRGYVVVGLDDSFVPMG 60 Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + +G G+D+D RA+ KI + ++ L++ ID++ Sbjct: 61 FREKSGKLVGYDIDLARAVFKLYG---IKISFQTIDWSMNATELRNGTIDLIWNGYTKNP 117 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY---FK 165 RE + + Q + KK I+S ++G ++ VQ+G++ +L + K Sbjct: 118 QREKVVAF--SNTYLKNKQVLVSLKKNHINSFDDMTGKTLGVQSGSSGYESLENNPKLLK 175 Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225 K P+ ++ A R D +++ Sbjct: 176 DKIAKKTPVQYDTFTNAFLDLNAGRIKGLLIDSVYASYYIKHEANSADYQETQGTFKSED 235 Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 A + +GD + + T + G K + + Sbjct: 236 FAVGMRKGDKTMK---RKINAGLKTLKANGTLDKINKKWFGN 274 >gi|227529073|ref|ZP_03959122.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus vaginalis ATCC 49540] gi|227351085|gb|EEJ41376.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus vaginalis ATCC 49540] Length = 289 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 47/280 (16%), Positives = 102/280 (36%), Gaps = 21/280 (7%) Query: 4 DFFVSILCLIILFFTSF----------STNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 +++ +I L S + + IKK G L G++ V + N Sbjct: 8 RALITLAIMIALLPISGCKKSANPNYRANHVDQWSRIKKSGQLNIGVDDSFVPMDFRQKN 67 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G G+DVD RA+ + K + ++ + L++ ID++ T R+ Sbjct: 68 GKLVGYDVDLSRAVCKVLG---LKANFQSIDWSMKETELKNGTIDVIWNGYTATPERQKK 124 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK--AHNMKY 171 + + GQ ++ K GI+S + G + +Q G+T Y + + Sbjct: 125 EAFSR--VYERSGQSLVVKKNSGINSFKDMQGKKLGLQEGSTAFTDFNKYPQLLKRYISG 182 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI-ISKSPLAPAI 230 PI+++ +A R + +++ ++ + +A + Sbjct: 183 SPIIYQDNNSAFMDLKAGRTQGVLAGTIYAGYYAKNLAKTNQYKLIGSNVFPQDRVAVGM 242 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 +GD +V +YA+ ++ G ++ + +N Sbjct: 243 RKGD---RTLVKKINYALGVLQKDGTLRRINEKWLGIDSN 279 >gi|168462508|ref|ZP_02696439.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195634303|gb|EDX52655.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 266 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 48/268 (17%), Positives = 94/268 (35%), Gaps = 18/268 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + ++ + ++ S + A +L +K+RG L G+ F+ +G GF+ Sbjct: 8 RQALMGVMAVALVAGMSAKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGEDGKLTGFE 67 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDF AL+ + P +L +K+ID++ + +R+ Sbjct: 68 VDFAEALAKHLGVKAL---LKPTKWDGILASLDAKRIDVVINQVTISDVRKKKYDF--ST 122 Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G ++ K I + + L G + V GT ++ + H ++ Sbjct: 123 PYTVSGVQALVKKGNEGTIKTAADLQGKKVGVGLGT----NYEEWLRQHVQGVDIRTYDD 178 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R R DA D L AL L + D S+ A+ +G+ + Sbjct: 179 DPTKYQDLRVGRIDAILVDR--LAALDLVKKTKGTLAVTGDAFSRQESGVALRKGNEDLL 236 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSK 266 V A+ ++ G + + Sbjct: 237 KAVD---NAIAEMQKDGTLKALSEKWFG 261 >gi|163858459|ref|YP_001632757.1| solute-binding protein [Bordetella petrii DSM 12804] gi|163262187|emb|CAP44489.1| probable solute-binding protein [Bordetella petrii] Length = 284 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 45/290 (15%), Positives = 113/290 (38%), Gaps = 15/290 (5%) Query: 2 YKDFFVSILCLIILFFT-SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59 Y+ +L I+L +A+ IK RG + CG + ++ G+ Sbjct: 3 YRSIKTVVLGTILLSAVWGSQASANQWDTIKARGTIVCGTQNASSPYGFQDPVKREYVGY 62 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD C+A++ + K+Q+ P++ + R ++ ++D+++ W R + + + Sbjct: 63 DVDMCKAIAKELG---LKLQHKPVSTEARIPEVKMGRVDMMAGAVAWLPKRAEQVDFSDQ 119 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 ++ GI +++ L G +C +G+++ + N + F+ + Sbjct: 120 --YLQGYIKVLVKADSGIKTLADLKGKKVCASSGSSSAAIAEKVLQGAN----VLTFQNI 173 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE-HVILPDIISKSPLAPAIIQGDTEWY 238 + ++ + +A T L + + + +L + + + QG+ Sbjct: 174 AQCYVGLQSGKVEAMTAGELVLRRFLNDSVKEGKPTALLDEPTYTEHIGIIVKQGEAALL 233 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEA 288 ++ A+ + EL + ++ + +QR ++ S +A Sbjct: 234 AQINQAIAALDKSGEL---TRIYDKWMGQESIYKMQRDFKVESVSAAAQA 280 >gi|309789346|ref|ZP_07683936.1| cystine-binding periplasmic protein [Shigella dysenteriae 1617] gi|308922740|gb|EFP68257.1| cystine-binding periplasmic protein [Shigella dysenteriae 1617] gi|332095482|gb|EGJ00498.1| cystine-binding periplasmic protein [Shigella dysenteriae 155-74] Length = 252 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 47/264 (17%), Positives = 88/264 (33%), Gaps = 15/264 (5%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 + L+ + +L +K+RG L G+ F+ +G GF+V+F + L+ Sbjct: 2 AVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQLA 61 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 + + S P +L SK+ID++ + R+ G Sbjct: 62 KHLGVEAS---LKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDF--STPYTISGIQ 116 Query: 129 FIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 ++ K I + + L G + V GT ++ + + ++ Sbjct: 117 ALVKKGNEGTIKTAADLKGKKVGVGLGT----NYEEWLRQNVQGVDVRTYDDDPTKYQDL 172 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 R R DA D L AL L + + S+ A+ +G+ + V+ Sbjct: 173 RVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDAIA 230 Query: 247 AMVTAEELGITQKNINQVSKDTTN 270 M L + D T Sbjct: 231 EMQKDGTLQALSE--KWFGADVTK 252 >gi|283852824|ref|ZP_06370087.1| extracellular solute-binding protein family 3 [Desulfovibrio sp. FW1012B] gi|283571816|gb|EFC19813.1| extracellular solute-binding protein family 3 [Desulfovibrio sp. FW1012B] Length = 270 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 53/254 (20%), Positives = 87/254 (34%), Gaps = 24/254 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI---------LGDIKKRGFLKCGINTGLVGFAEVK 51 M + + L + L ++ A L I +RG L G+ F V Sbjct: 1 MIRFIRIVSLAFVALTMCCGTSVAVTPFDVYEGSNLRKIVQRGTLVVGMELKFWPFEYVD 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G+ GFDVD R L+ + K++ + AL + +ID++ TL R Sbjct: 61 EQGNPVGFDVDIARTLAERLG---VKLEIKDMEWTGLIPALTAGKIDLIISGITGTLERG 117 Query: 112 ISLGLAFRPITYFDG--QGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAH 167 S+ + G K ++ + L G I V+ GTT +L F Sbjct: 118 KSITF--TSPYFTTGLCALLSAQKAGDVTDAAALDAPGRIIAVKTGTTADLVATKRFPKA 175 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 + A R DA+ D ++ K P L + P Sbjct: 176 ----TINRYSDETACVQEVVAGRVDAFFYDQISI--GKHHRQNPETTKALLTPFTYEPFC 229 Query: 228 PAIIQGDTEWYNIV 241 A+ +GD +W+ + Sbjct: 230 IALQKGDFDWWQWL 243 >gi|258508267|ref|YP_003171018.1| ABC transporter amino acid-binding protein [Lactobacillus rhamnosus GG] gi|257148194|emb|CAR87167.1| ABC transporter, amino acid-binding protein [Lactobacillus rhamnosus GG] gi|259649585|dbj|BAI41747.1| amino acid ABC transporter substrate binding component [Lactobacillus rhamnosus GG] Length = 270 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 40/267 (14%), Positives = 93/267 (34%), Gaps = 13/267 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILG----DIKKRGFLKCGINTGLVGFAEVKANGD 55 M + ++++ + + S A + I++ + G++ V + NG Sbjct: 1 MKRRMIMAVMVFLTMAGIVISGCARETVDNSWPRIERTKKVVIGLDDTFVPMGFRQKNGQ 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G+D+D +A+ K + ++ + L+++ ID++ T R+ + Sbjct: 61 LAGYDIDLAKAVFKRYG---IKADFQTIDWSMKETELKNQTIDLIWNGYSVTPERKAKVA 117 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYH 172 + + Q + K I+++ + G ++ VQ G++ L K Sbjct: 118 FSND--YLINHQIVVTKTKSQINTLKDMKGKTLGVQTGSSGAFDLDAQPKLLKNMIANKT 175 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 PI+++ + A R D P+ + I+ D A + + Sbjct: 176 PILYDTFNDAFIDLDAGRIQGILMDEVYARYYIAHKPDPASYHIIGDSFPPEQFAVGMRK 235 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQK 259 D ++ A+ + QK Sbjct: 236 SDHVLREKINAGLKALKADGTIAKLQK 262 >gi|213965170|ref|ZP_03393368.1| bacterial extracellular solute-binding protein, family 3 [Corynebacterium amycolatum SK46] gi|213952284|gb|EEB63668.1| bacterial extracellular solute-binding protein, family 3 [Corynebacterium amycolatum SK46] Length = 359 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 49/271 (18%), Positives = 104/271 (38%), Gaps = 26/271 (9%) Query: 29 DIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 +I +RG + G++ L + + G+ GF+V + ++ IFD+P +++ +++ E Sbjct: 96 EIYQRGRIIVGVDQSLNLLSFRDFSTGELSGFEVSLAQEIARDIFDNPDAVEFRFVDSNE 155 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 R AL+ +D++ R T R + G ++ G +S + Sbjct: 156 RTAALEDGTVDVVLRTMTVTDARRERVLF--SAPYLTARAGVLVSSPGGDASPEDVEDGR 213 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 ICV G+TTE + + ++ + + + + + D + L + Sbjct: 214 ICVSRGSTTEDLIRRLSPNN----TLLLVGNWSDCLISLQNSQAEIVVADDTILAGI--- 266 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 ND+ I+ +++ A + +G+ ++ T M + G Q + Sbjct: 267 NDQDPATAIVQRGLNEESYAAGVSKGNPGLVRQINATLERMAS---DGTWQSLYDTWFGP 323 Query: 268 TTNPDVQRFL--GIDKSSNIGEA---LGLTK 293 FL G S G+ LG++ Sbjct: 324 --------FLPSGAQPSPQYGDDEDILGISP 346 >gi|255589615|ref|XP_002535024.1| ATP binding cassette (abc) transporter, putative [Ricinus communis] gi|223524174|gb|EEF27358.1| ATP binding cassette (abc) transporter, putative [Ricinus communis] Length = 437 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 68/178 (38%), Gaps = 10/178 (5%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 L +IK +G L CG+ + F G+D++ C+ +++ + P + + Sbjct: 29 DQLQNIKSKGILTCGVLGTVPPFGYQDPKTRKPIGYDIEICKIVANHLGVKPI---FKVI 85 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 + R + +ID+++ + WT R + + + Y +S +QL Sbjct: 86 SPAARIPEVDQGRIDVITGSLGWTPAR--AQQVDYSYSYYVTETVLGFPADAKFTSWNQL 143 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 +G I TT+ + K I F+ V + A R + DA D L Sbjct: 144 AGKRIGAVNSTTSAAAAREKLP----KSSVITFDDVAQAFLALRQRKTDAVAMDEIFL 197 >gi|77456603|ref|YP_346108.1| extracellular solute-binding protein [Pseudomonas fluorescens Pf0-1] gi|77380606|gb|ABA72119.1| amino acid ABC transporter substrate-binding protein, PAAT family [Pseudomonas fluorescens Pf0-1] Length = 265 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 55/272 (20%), Positives = 102/272 (37%), Gaps = 17/272 (6%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K + +L + + A + D KRG LK G++ + F G+ GF+V Sbjct: 1 MKKYLSMLLVGVTALVAVNAAQAGAIDDAVKRGSLKVGMDPTYMPFEMTNKRGEIIGFEV 60 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D +A++ A+ K++ + AL + + D++ T R L L F Sbjct: 61 DILKAMTKAMG---VKLELVSTGYDGIIPALMTDKFDMIGSGMTLTQERN--LRLNFSEP 115 Query: 122 TYFDGQGFIMHK--KKGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 GQ ++ K + I S L+ A I + GTT E+ ++ Sbjct: 116 FIVVGQTLLIRKELEGTIKSYKDLNTADYRITSKLGTTGEMVAKKLISKAKY----HGYD 171 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 +E + DA+ D + + + V L + PLA + +GD Sbjct: 172 NEQEAVLDVVNGKADAFIYDAP-YNVVAVNKVGAGKLVFLDKPFTYEPLAFGLKKGD--- 227 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 Y+ +++ + + E G + ++ K T Sbjct: 228 YDSLNFINNFLHQIHEDGTYDRIHDKWFKSTE 259 >gi|22126343|ref|NP_669766.1| cystine transporter subunit [Yersinia pestis KIM 10] gi|45441366|ref|NP_992905.1| cystine transporter subunit [Yersinia pestis biovar Microtus str. 91001] gi|51596053|ref|YP_070244.1| cystine transporter subunit [Yersinia pseudotuberculosis IP 32953] gi|108807218|ref|YP_651134.1| cystine transporter subunit [Yersinia pestis Antiqua] gi|108812438|ref|YP_648205.1| cystine transporter subunit [Yersinia pestis Nepal516] gi|149366208|ref|ZP_01888243.1| putative cystine-binding periplasmic protein [Yersinia pestis CA88-4125] gi|153949990|ref|YP_001401243.1| cystine transporter subunit [Yersinia pseudotuberculosis IP 31758] gi|162420780|ref|YP_001606501.1| cystine transporter subunit [Yersinia pestis Angola] gi|165925949|ref|ZP_02221781.1| cystine-binding periplasmic protein FliY [Yersinia pestis biovar Orientalis str. F1991016] gi|165938780|ref|ZP_02227335.1| cystine-binding periplasmic protein FliY [Yersinia pestis biovar Orientalis str. IP275] gi|166010832|ref|ZP_02231730.1| cystine-binding periplasmic protein FliY [Yersinia pestis biovar Antiqua str. E1979001] gi|166210652|ref|ZP_02236687.1| cystine-binding periplasmic protein FliY [Yersinia pestis biovar Antiqua str. B42003004] gi|167401164|ref|ZP_02306667.1| cystine-binding periplasmic protein FliY [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167420150|ref|ZP_02311903.1| cystine-binding periplasmic protein FliY [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425781|ref|ZP_02317534.1| cystine-binding periplasmic protein FliY [Yersinia pestis biovar Mediaevalis str. K1973002] gi|170024601|ref|YP_001721106.1| cystine transporter subunit [Yersinia pseudotuberculosis YPIII] gi|186895159|ref|YP_001872271.1| cystine transporter subunit [Yersinia pseudotuberculosis PB1/+] gi|218928965|ref|YP_002346840.1| cystine transporter subunit [Yersinia pestis CO92] gi|229896294|ref|ZP_04511464.1| cystine transporter subunit; periplasmic-binding component of ABC superfamily [Yersinia pestis Pestoides A] gi|229897231|ref|ZP_04512387.1| cystine transporter subunit; periplasmic-binding component of ABC superfamily [Yersinia pestis biovar Orientalis str. PEXU2] gi|229897958|ref|ZP_04513109.1| cystine transporter subunit; periplasmic-binding component of ABC superfamily [Yersinia pestis biovar Orientalis str. India 195] gi|229902811|ref|ZP_04517928.1| cystine transporter subunit; periplasmic-binding component of ABC superfamily [Yersinia pestis Nepal516] gi|270486600|ref|ZP_06203674.1| bacterial extracellular solute-binding protein, family 3 [Yersinia pestis KIM D27] gi|294503991|ref|YP_003568053.1| putative cystine-binding periplasmic protein [Yersinia pestis Z176003] gi|21959325|gb|AAM86017.1|AE013849_8 putative periplasmic cysteine-binding ABC transport protein [Yersinia pestis KIM 10] gi|45436226|gb|AAS61782.1| putative cystine-binding periplasmic protein [Yersinia pestis biovar Microtus str. 91001] gi|51589335|emb|CAH20957.1| putative cystine-binding periplasmic protein [Yersinia pseudotuberculosis IP 32953] gi|108776086|gb|ABG18605.1| cystine-binding periplasmic protein [Yersinia pestis Nepal516] gi|108779131|gb|ABG13189.1| putative cystine-binding periplasmic protein [Yersinia pestis Antiqua] gi|115347576|emb|CAL20486.1| putative cystine-binding periplasmic protein [Yersinia pestis CO92] gi|149292621|gb|EDM42695.1| putative cystine-binding periplasmic protein [Yersinia pestis CA88-4125] gi|152961485|gb|ABS48946.1| cystine-binding periplasmic protein FliY [Yersinia pseudotuberculosis IP 31758] gi|162353595|gb|ABX87543.1| cystine-binding periplasmic protein FliY [Yersinia pestis Angola] gi|165913394|gb|EDR32016.1| cystine-binding periplasmic protein FliY [Yersinia pestis biovar Orientalis str. IP275] gi|165922153|gb|EDR39330.1| cystine-binding periplasmic protein FliY [Yersinia pestis biovar Orientalis str. F1991016] gi|165990176|gb|EDR42477.1| cystine-binding periplasmic protein FliY [Yersinia pestis biovar Antiqua str. E1979001] gi|166207832|gb|EDR52312.1| cystine-binding periplasmic protein FliY [Yersinia pestis biovar Antiqua str. B42003004] gi|166961845|gb|EDR57866.1| cystine-binding periplasmic protein FliY [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167049553|gb|EDR60961.1| cystine-binding periplasmic protein FliY [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167055180|gb|EDR64977.1| cystine-binding periplasmic protein FliY [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169751135|gb|ACA68653.1| extracellular solute-binding protein family 3 [Yersinia pseudotuberculosis YPIII] gi|186698185|gb|ACC88814.1| extracellular solute-binding protein family 3 [Yersinia pseudotuberculosis PB1/+] gi|229680258|gb|EEO76357.1| cystine transporter subunit; periplasmic-binding component of ABC superfamily [Yersinia pestis Nepal516] gi|229688999|gb|EEO81064.1| cystine transporter subunit; periplasmic-binding component of ABC superfamily [Yersinia pestis biovar Orientalis str. India 195] gi|229693568|gb|EEO83617.1| cystine transporter subunit; periplasmic-binding component of ABC superfamily [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701217|gb|EEO89246.1| cystine transporter subunit; periplasmic-binding component of ABC superfamily [Yersinia pestis Pestoides A] gi|262361824|gb|ACY58545.1| putative cystine-binding periplasmic protein [Yersinia pestis D106004] gi|262366040|gb|ACY62597.1| putative cystine-binding periplasmic protein [Yersinia pestis D182038] gi|270335104|gb|EFA45881.1| bacterial extracellular solute-binding protein, family 3 [Yersinia pestis KIM D27] gi|294354450|gb|ADE64791.1| putative cystine-binding periplasmic protein [Yersinia pestis Z176003] gi|320015413|gb|ADV98984.1| cystine transporter subunit; periplasmic-binding component of ABC superfamily [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 266 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 46/264 (17%), Positives = 84/264 (31%), Gaps = 15/264 (5%) Query: 2 YKDFFVSILCLIILFFTSFS--TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + + ++ + + + +L +K+RG L G+ F+ +G GF Sbjct: 7 RRRIVLGMVAVALATGLNVKSYAAGDLLEQVKQRGTLIVGLEGTYPPFSFQGEDGKLTGF 66 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 +VDF AL+ + K + P +L+SK+ID+ + R+ Sbjct: 67 EVDFANALAEHMG---VKAKITPTKWDGMLASLESKRIDVAINQVTISDERKKKYDF--S 121 Query: 120 PITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 G + K + L G + V G+ E L + K ++ Sbjct: 122 TPYTVSGIQVLTKKGNEGQFTKPEDLQGKKVGVGLGSNYEQWLRENLK----DVDIRTYD 177 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 R R DA D L AL L + ++ A+ + + E Sbjct: 178 DDPTKYQDLRVGRTDAILVDR--LAALDLVKKTNDALAVAGPAFARQESGVAMRKNNPEL 235 Query: 238 YNIVSWTHYAMVTAEELGITQKNI 261 V+ M L + Sbjct: 236 LAAVNNAIAEMQKDGTLAKISEKY 259 >gi|158424239|ref|YP_001525531.1| ABC transporter substrate binding protein [Azorhizobium caulinodans ORS 571] gi|158331128|dbj|BAF88613.1| ABC transporter substrate binding protein [Azorhizobium caulinodans ORS 571] Length = 264 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 47/226 (20%), Positives = 83/226 (36%), Gaps = 13/226 (5%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 +I +RG ++ G+ G V G+ G+D D ++ + K +Y+ L R Sbjct: 34 EIVQRGTVRIGVLIGGPPMGMVDDKGNPTGYDYDVAVLIAKYLG---VKAEYVALTPPAR 90 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 ALQ+ ++D L + T R S+ Y ++ K + S+ L G + Sbjct: 91 IPALQTGRVDFLIATLNPTPERARSVMFTM---PYNAFNMVVVTKGAKVESLDALKGKKV 147 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 GT E L + +FE A + + +A + + L + Sbjct: 148 GATRGTPQEAALR-----RAGGINVTIFEDDSITTQALLSGQVEAAALPETLV--LSVAK 200 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 P + + I + A+ GD E ++ T Y M EL Sbjct: 201 QNPDAKLEIGFSIYAQGNSMAVRPGDFEILQWLNNTIYFMKKNGEL 246 >gi|160901198|ref|YP_001566780.1| extracellular solute-binding protein [Delftia acidovorans SPH-1] gi|160366782|gb|ABX38395.1| extracellular solute-binding protein family 3 [Delftia acidovorans SPH-1] Length = 272 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 49/224 (21%), Positives = 82/224 (36%), Gaps = 13/224 (5%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 IK+RG + G+ F + G++V ++ + ++ + + Sbjct: 26 DRIKQRGKIVVGVMLSGPPFGTIDPVTQRHVGYNVQLSEGVAKGLGVG---VETVQVQPS 82 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD-GQGFIMHKKKGISSVSQLSG 145 R LQ ++DIL N WT R S L+F P + + G I K G+ L G Sbjct: 83 NRVQFLQQGKVDILIANMQWTQER--SEILSFVPTPFEEVGGAAIAKKSSGVRQWDDLRG 140 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 +CV G+ LAD + A F E A + C A L L Sbjct: 141 KPVCVSQGSNFTKPLADQYGAQ-----IKAFRGQPESLLALKGGNCAAAVHVSPTLRELV 195 Query: 206 LTNDRPSEHVIL-PDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 +N ++ I+ P I SP + +G+++ + Sbjct: 196 ASNADWKDYEIVSPADIIPSPSVIWLRKGESDTQAAIDRIVQDW 239 >gi|163747482|ref|ZP_02154833.1| putative ABC transporter periplasmic amino acid-binding protein [Oceanibulbus indolifex HEL-45] gi|161379238|gb|EDQ03656.1| putative ABC transporter periplasmic amino acid-binding protein [Oceanibulbus indolifex HEL-45] Length = 268 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 43/263 (16%), Positives = 89/263 (33%), Gaps = 9/263 (3%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 F L+ + A L DI G L+C + GFDVD+ Sbjct: 2 KFTQLAGSLVAATVIGSAAQADKLDDIISSGTLRCAVVLDFPPMGSRDDTNTPVGFDVDY 61 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 C L++A+ D + + +R AL S + D+ +T TL R ++G + + Sbjct: 62 CNDLAAALGVDA---EIVETPFPDRIPALVSGRADVGVASTSDTLERAKTVGFSVPYFAF 118 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 + + + G+ S L G ++ AGT + L + A + ++ ++ Sbjct: 119 TNV--VLTREDAGVDSFESLKGKTVGSVAGTFEAIALEEQIDAWDDG-SFRSYQSQADVF 175 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 + + DA + ++ + + ++ + N + Sbjct: 176 LSLSQGQIDATVVTSTVASSIVNGGKFEGLTIAGDAPFDVDYVGLIGLRQEYGLLNYLDL 235 Query: 244 THYAMVTAEELGITQKNINQVSK 266 V + G Q+ ++ Sbjct: 236 FVNQQVRS---GRYQELFDKWVG 255 >gi|229552065|ref|ZP_04440790.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus rhamnosus LMS2-1] gi|258539479|ref|YP_003173978.1| amino acid ABC transporter substrate-binding protein [Lactobacillus rhamnosus Lc 705] gi|229314582|gb|EEN80555.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus rhamnosus LMS2-1] gi|257151155|emb|CAR90127.1| ABC transporter, amino acid-binding protein [Lactobacillus rhamnosus Lc 705] Length = 270 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 40/267 (14%), Positives = 93/267 (34%), Gaps = 13/267 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILG----DIKKRGFLKCGINTGLVGFAEVKANGD 55 M + ++++ + + S A + I++ + G++ V + NG Sbjct: 1 MKRRMIMAVMVFLTMAGIVISGCARETVDNSWPRIERTKKVVIGLDDTFVPMGFRQKNGQ 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G+D+D +A+ K + ++ + L+++ ID++ T R+ + Sbjct: 61 LAGYDIDLAKAVFKRYG---IKADFQTIDWSMKETELKNQTIDLIWNGYSVTPERKAKVA 117 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYH 172 + + Q + K I+++ + G ++ VQ G++ L K Sbjct: 118 FSND--YLINHQILVTKTKSQINTLKDMKGKTLGVQTGSSGAFDLDAQPKLLKNMIANKT 175 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 PI+++ + A R D P+ + I+ D A + + Sbjct: 176 PILYDTFNDAFIDLDAGRIQGILMDEVYARYYIAHKPDPASYHIIGDSFPPEEFAVGMRK 235 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQK 259 D ++ A+ + QK Sbjct: 236 SDHVLREKINAGLKALKADGTIAKLQK 262 >gi|326318473|ref|YP_004236145.1| family 3 extracellular solute-binding protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375309|gb|ADX47578.1| extracellular solute-binding protein family 3 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 300 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 53/259 (20%), Positives = 92/259 (35%), Gaps = 19/259 (7%) Query: 9 ILCLIILFFTSFSTNASILG------DIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDV 61 L +A + IK+ G L+ G F+ + +G +GFD Sbjct: 31 AAAFDALVAQGPVASAETIAASPWASKIKQAGTLRLGGTQTSNLFSLLNEKDGRMRGFDA 90 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + L+ I D SK+Q+ + + R L + Q+D + T R + A Sbjct: 91 GIAQLLTRYILGDASKVQFTQVTSSTREQVLVNGQVDTVIATYSITPARAEKISFA--GP 148 Query: 122 TYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G ++ + I S + L G + QAG+T LA + K F+ + Sbjct: 149 YYTSQAGVLVKANNQAIQSYNDLGGKKVATQAGSTGPAILAQFAP----KSTVQEFQTHQ 204 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + R R AY D + L ++ P ++ P + +G Sbjct: 205 EALDSLRQGRVAAYVTDYTLLLNTLSLGTGDAKLAGAP-FGAQDPYGIGLPKGSDG---- 259 Query: 241 VSWTHYAMVTAEELGITQK 259 V++ + + E G K Sbjct: 260 VAFVNAFLKKIEADGTWAK 278 >gi|238853598|ref|ZP_04643967.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus gasseri 202-4] gi|238833742|gb|EEQ26010.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus gasseri 202-4] Length = 263 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 50/254 (19%), Positives = 87/254 (34%), Gaps = 7/254 (2%) Query: 11 CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70 + + AS IK+RG L G++ V + NG GFDVD A+ Sbjct: 15 VITSVGLAGCQRQASSWQKIKERGTLVIGVDDSFVPMDFRQKNGKLVGFDVDLATAVCKE 74 Query: 71 IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130 I P + ++ + L++ ID++ T R + + + Q + Sbjct: 75 IGLKPD---FQTIDWSMKETELRNGTIDVIWNGYTKTKARAKKVAFSR--PYLENDQILV 129 Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV-FERVEEIDAAYRAH 189 KK+ I+S Q+ G + VQ G++ L +Y + V ++ +A Sbjct: 130 TRKKEQINSYRQMKGRILGVQTGSSGADDLDNYPNVLKKRVKSAVLYDTYNNAFIDLKAG 189 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 R D D + E + I + D + ++ + Sbjct: 190 RIDGLLIDGVYANYYLAHSKYQKEFKKEKLPYPSEKFSVGINKKDQILKDKINQALDHLE 249 Query: 250 TAEEL-GITQKNIN 262 EL I QK N Sbjct: 250 KTGELEKIKQKWFN 263 >gi|62180528|ref|YP_216945.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62128161|gb|AAX65864.1| putative periplasmic binding transport protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322715004|gb|EFZ06575.1| cystine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 252 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 49/260 (18%), Positives = 89/260 (34%), Gaps = 16/260 (6%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 + L+ + +L +K+RG L G+ F+ +G GF+VDF AL+ Sbjct: 2 AVALVAGMSAKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGEDGKLTGFEVDFAEALA 61 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 + K P +L SK+ID++ + +R+ G Sbjct: 62 KHLG---VKASLKPTKWDGMLASLDSKRIDVVINQVTISDVRKKKYDF--STPYTVSGVQ 116 Query: 129 FIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 ++ K I + + L G + V GT ++ + H ++ Sbjct: 117 ALVKKGNEGTIKTAADLQGKKVGVGLGT----NYEEWLRQHVQGVDIRTYDDDPTKYQDL 172 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 R R DA D L AL L + D S+ A+ +G+ + V Sbjct: 173 RVGRIDAILVDR--LAALDLVKKTKGTLAVTGDAFSRQESGVALRKGNEDLLKAVD---N 227 Query: 247 AMVTAEELGITQKNINQVSK 266 A+ ++ G + + Sbjct: 228 AIAEMQKDGTLKALSEKWFG 247 >gi|213586697|ref|ZP_03368523.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 180 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 33/178 (18%), Positives = 64/178 (35%), Gaps = 11/178 (6%) Query: 3 KDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 + ++L + + + + S L I K G + G V F+ Sbjct: 4 RKLTTAMLVMGLSAGLAHAEDGAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVV 63 Query: 58 GFDVDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ D+ A+ + +K ++ +P+ ++ R LQ+ D +T L R+ Sbjct: 64 GYSQDYSNAIVEVVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQ 123 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 + G + K I L G ++ V +GTT+E+ L + M Sbjct: 124 AAF--SDTIFVVGTRLLTKKGGDIKDFPDLKGKAVVVTSGTTSEILLHKLNEEQKMGC 179 >gi|168239190|ref|ZP_02664248.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194736301|ref|YP_002114987.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194711803|gb|ACF91024.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197288089|gb|EDY27476.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 266 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 95/268 (35%), Gaps = 18/268 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + ++ + ++ S + A +L +K+RG L G+ F+ +G GF+ Sbjct: 8 RQALMGVMAVALVAGMSAKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGEDGKLTGFE 67 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDF AL+ + K P +L +K+ID++ + +R+ Sbjct: 68 VDFAEALAKHLG---VKASLKPTKWDGILASLDAKRIDVVINQVTISDVRKKKYDF--ST 122 Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G ++ K I + + L G + V GT ++ + H ++ Sbjct: 123 PYTISGVQALVKKGNEGTIKTAADLQGKKVGVGLGT----NYEEWLRQHVQGVDIRTYDD 178 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R R DA D L AL L + D S+ A+ +G+ + Sbjct: 179 DPTKYQDLRVGRIDAILVDR--LAALDLVKKTKGTLAVTGDAFSRQESGVALRKGNEDLL 236 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSK 266 V A+ ++ G + + Sbjct: 237 KAVD---NAIAEMQKDGTLKALSEKWFG 261 >gi|15896854|ref|NP_350203.1| amino acid ABC transporter periplasmic-binding protein [Clostridium acetobutylicum ATCC 824] gi|15026720|gb|AAK81543.1|AE007858_4 Amino acid (probably glutamine) ABC transporter, periplasmic binding protein component [Clostridium acetobutylicum ATCC 824] gi|325511028|gb|ADZ22664.1| Amino acid (probably glutamine) ABC transporter, periplasmic binding protein component [Clostridium acetobutylicum EA 2018] Length = 264 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 46/274 (16%), Positives = 94/274 (34%), Gaps = 22/274 (8%) Query: 1 MYKDFF------VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-AN 53 M K F V L + ++ + L +KK + GI+ A Sbjct: 1 MLKKIFSLSVVLVLTLAIFTGCTSATVSKDDSLERVKKAKEIVIGIDDTYPPMEFKDKAT 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G GFD+D A++ + K +++P + FLAL+SK+ D++ + T R+ + Sbjct: 61 GKVSGFDIDMANAIAKKLG---VKTKFVPNSFDGIFLALKSKKFDVVHSSISITDERKKA 117 Query: 114 LGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + + G + I + + + + GTT + LA + Sbjct: 118 MIF--SDPYIYGGNAIFVKSDNTTIKNEKDFNNQVVGCEVGTTAQDVLA----KISGIKE 171 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + + + + R A D + P + L +++ P+ A + Sbjct: 172 VKKYNAMTDAFLDLQNGRIAAVVSDP--MVGDYYNVTDPGKFKKLESSLTQEPIGVAFRK 229 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 D + + A+ ++ G K + Sbjct: 230 EDKSLRDAYN---KAIKELKKDGTMSKLSKKWFG 260 >gi|47092892|ref|ZP_00230674.1| amino acid ABC transporter, amino acid-binding protein [Listeria monocytogenes str. 4b H7858] gi|47018718|gb|EAL09469.1| amino acid ABC transporter, amino acid-binding protein [Listeria monocytogenes str. 4b H7858] gi|328466491|gb|EGF37634.1| amino acid ABC transporter (binding protein) [Listeria monocytogenes 1816] Length = 271 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 41/273 (15%), Positives = 96/273 (35%), Gaps = 14/273 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILG---DIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K ++++ +++L + S+ S IKK + G++ V + + Sbjct: 1 MKKGLLITVMLMVMLALGACSSGESKEDQWSRIKKDKEVVIGLDDSFVPMGFRDKDDNLV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D +A+ + K ++ P++ + L++ ID++ T R+ + + Sbjct: 61 GFDIDLAKAVFAEYG---IKAKFTPIDWTMKESELKNGSIDLIWNGYTVTDARKKQVAFS 117 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPI 174 + Q + K I+ S + ++ Q G ++ +A + P Sbjct: 118 Q--PYMKNEQVLVTLKSSNINQFSDMKNKTLGAQNGASSIDDMAKKTEVLTDIINNNEPE 175 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +++ + R D D ++ I+ + A + + D Sbjct: 176 LYDTFDTAFIDLNNKRIDGLIIDEVYARYYIDKQKNKDDYNIITGGFDATDFAVGMRKSD 235 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 E + + A + G Q+ + D Sbjct: 236 KELQ---TKINEAFEKLYKEGKMQEISKKWFGD 265 >gi|256017882|ref|ZP_05431747.1| cystine transporter subunit [Shigella sp. D9] Length = 266 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 47/272 (17%), Positives = 94/272 (34%), Gaps = 17/272 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + ++ + ++ S + A +L +K+RG L G+ F+ +G GF+ Sbjct: 8 RQALMGVMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFE 67 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F + L+ + + S P +L SK+ID++ + R+ Sbjct: 68 VEFAQQLAKHLGVEAS---LKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDF--ST 122 Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G ++ K + + + L G + V GT ++ + + ++ Sbjct: 123 PYTISGIQALVKKGNEGTLKTAADLKGKKVGVGLGT----NYEEWLRQNVQGVDVRTYDD 178 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R R DA D L AL L + + S+ A+ +G+ + Sbjct: 179 DPTKYQDLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLL 236 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 V+ M L + D T Sbjct: 237 KAVNGAIAEMQKDGTLQALSE--KWFGADVTK 266 >gi|225374847|ref|ZP_03752068.1| hypothetical protein ROSEINA2194_00470 [Roseburia inulinivorans DSM 16841] gi|225213308|gb|EEG95662.1| hypothetical protein ROSEINA2194_00470 [Roseburia inulinivorans DSM 16841] Length = 267 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 50/270 (18%), Positives = 93/270 (34%), Gaps = 15/270 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58 M K + ++ + L T+ + + G G + F V +G++ G Sbjct: 1 MKKFMALLLVAGMTLSLTACGGSTDTAKTDQADGKDTFTVGFDQDFPPFGYVGDDGEFTG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD++ ++ + KI P++ + + L++ ID + + Sbjct: 61 FDIEMATECAARMGK---KIVLQPIDWDAKDMELEAGTIDCIWNGFTMN---GREDQYTW 114 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY--HPIVF 176 + Q ++ K GI++++ L+G + VQ + E L D A M + Sbjct: 115 TDPYMDNSQVVVVKKDSGINTLADLAGKVVEVQKESAAETALNDEEHADLMASFAQLLSV 174 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + DA D A + ++ IL + IS A G+T Sbjct: 175 GEYNTAFMDLESGAVDAVAID--IGVAQFQIEGKEDQYQILDETISSEQYAVGFFLGNTA 232 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSK 266 + V T MV E G + NQ Sbjct: 233 LRDEVQSTLLEMV---EDGTFAEISNQYFG 259 >gi|300313886|ref|YP_003777978.1| amino acid ABC transporter periplasmic protein [Herbaspirillum seropedicae SmR1] gi|300076671|gb|ADJ66070.1| ABC-type amino acid transport system, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 267 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 43/248 (17%), Positives = 82/248 (33%), Gaps = 12/248 (4%) Query: 13 IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72 ++L T+ + A L DIKK G ++ + F G DV+ R L+ + Sbjct: 17 LVLGLTAHAALADQLDDIKKAGKIRIATTSSTPLFGYSDEKLQLAGSDVEAARLLAQDLG 76 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 ++ +P+ R LQ+ + DI+ + T R + Sbjct: 77 ---VQLDLIPVANAARVPTLQANRADIVVGSLSITPERLKVIDF--STPYAVISLIIGAP 131 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 K I + L+G I V T + K + +E + + + D Sbjct: 132 KSMVIKDYADLNGKRIGVTRATPNDTLTTQNAKGA----EIMRYEDDATLITSMVTGQVD 187 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS-WTHYAMVTA 251 ++ S L ++ P +++ + L AI + + W M Sbjct: 188 VFSSTPSNL--QEMQKKAPGKNLEMKFEQKAFDLGIAINKNQPRLKEWIDGWVKTNMKNG 245 Query: 252 EELGITQK 259 + I +K Sbjct: 246 KLNAIYKK 253 >gi|187923719|ref|YP_001895361.1| extracellular solute-binding protein family 3 [Burkholderia phytofirmans PsJN] gi|187714913|gb|ACD16137.1| extracellular solute-binding protein family 3 [Burkholderia phytofirmans PsJN] Length = 264 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 56/277 (20%), Positives = 104/277 (37%), Gaps = 21/277 (7%) Query: 1 MYKDFF--VSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M + + LI FT+ + +A +L +K+RG L+ G+ F +G+ Sbjct: 1 MKIGLLKKILVAGLIGASFTAVAAHADDLLDQVKQRGTLRIGLEGTFPPFNSKAPSGELV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G+DVD +A+++ + P +++ LQ+ + D++ T R+ +L Sbjct: 61 GYDVDIAKAVAAKLGVKP---EFVTTEWSGIIAGLQANKFDVIVNQVGITDARKQALDF- 116 Query: 118 FRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 P + I K S+ L G + V G T + +A ++K +P Sbjct: 117 -SPAYTYSAAQLIQRKDDTRQFKSLDDLKGKKLGVGLG-TNYMDMAKSVPGIDVKTYPGA 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 E A R DA D L L + P ++ + +P +G+ Sbjct: 175 ----PEYLRDLAAGRLDAALNDRLMLAYLMKNSQLP--LRTGANVGAGNPSGIPFRKGNP 228 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSK-DTTNP 271 ++ + AM E G K ++ D + P Sbjct: 229 KFAKAIDD---AMTQLEADGTFSKISDKWFGIDVSKP 262 >gi|104784004|ref|YP_610502.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas entomophila L48] gi|95112991|emb|CAK17719.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas entomophila L48] Length = 266 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 50/273 (18%), Positives = 100/273 (36%), Gaps = 17/273 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + +L + A + D KRG L+ G++ + F G+ GF+ Sbjct: 1 MMKKYLSRLLVGATALIAVTAAQAGAIDDAVKRGTLRVGMDPTYMPFEMTNKRGEIIGFE 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A++ ++ K++ + AL + + D + T R L L F Sbjct: 61 VDILKAMAKSMG---VKLETVSTAYDGIIPALLTDKFDFIGSGMTLTQERN--LRLNFSE 115 Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVF 176 GQ ++ K+ I S L+ I + GTT E+ + Sbjct: 116 PFIVVGQTLLIRKELVGEIKSYKDLNNEKYRITSKLGTTGEMVSKKLIGKAKY----HGY 171 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + +E + DA+ D + + + L + + PLA + +GD Sbjct: 172 DNEQEAVMDVVNGKADAFVYDAP-YNVVAVEKAGAGKLAFLEEPFTYEPLAFGLKKGD-- 228 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 Y+ +++ + + + G + ++ K+ Sbjct: 229 -YDSINFINNFLHQIKHDGTYDRIHDKWFKNKD 260 >gi|296159865|ref|ZP_06842686.1| extracellular solute-binding protein family 3 [Burkholderia sp. Ch1-1] gi|295889848|gb|EFG69645.1| extracellular solute-binding protein family 3 [Burkholderia sp. Ch1-1] Length = 274 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 43/258 (16%), Positives = 91/258 (35%), Gaps = 16/258 (6%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 ++ L L + +A L I K G ++ G+ F + + G+D+D Sbjct: 22 LAFTGLGALCALPSAAHADALDTIAKSGTVRIGVFEDYPPFGSIGPDMKPMGYDIDVANL 81 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 + A+ +K++ + + R L + D+L + T RE + + Y+ Sbjct: 82 IGRAL---NAKVELVQVTGDNRMAYLADHKADMLL-SVGQTPEREKVIDFSQPYAPYY-- 135 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 K + + + L+G SI V GT +L++ + F+ +A+ Sbjct: 136 LAVFGPKALPVKNAADLAGKSISVARGTLEDLSVTKIAP---PTANIKRFDDPNGAISAF 192 Query: 187 RAHRCDAYT--GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + + D+ A + + P + + SP + + + V T Sbjct: 193 LSGQVQLMVVGNDVGATILARHPANDPEQ----KFSLFSSPDHVGLNKNEPRLKQKVDET 248 Query: 245 HYAMVTAEELG-ITQKNI 261 + I+QK + Sbjct: 249 IAKARKDGTMNAISQKWL 266 >gi|167034163|ref|YP_001669394.1| extracellular solute-binding protein [Pseudomonas putida GB-1] gi|166860651|gb|ABY99058.1| extracellular solute-binding protein family 3 [Pseudomonas putida GB-1] Length = 279 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 45/225 (20%), Positives = 83/225 (36%), Gaps = 11/225 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFD 60 + S+L + + + + L +++R L G+ F + A + GF Sbjct: 8 RRGLLASLLATTTVAASGLAQADATLDKVQQRHKLAVGVVLSGGPFGAIDPATREPIGFS 67 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD R L+ + + + + R LQ ++D+L N +WT R+ LG Sbjct: 68 VDLARDLARQLG---VAVDLVAVQPANRVQFLQQGKVDLLIANMEWTPERDKLLG-HVPT 123 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G + K I++ + L G +C G++ L + F+ Sbjct: 124 PFYRVGGTAALAKDSPINTWAGLKGQPVCTSQGSSYTQALVEL------GADIKAFKTSA 177 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225 E A R + C A D + + L S + L ++ +P Sbjct: 178 ESLLALRGNNCVAAVHDATLINPLLAKGGEWSGYRALAPELNPAP 222 >gi|332101261|gb|EGJ04607.1| cystine-binding periplasmic protein [Shigella sp. D9] Length = 285 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 47/272 (17%), Positives = 94/272 (34%), Gaps = 17/272 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + ++ + ++ S + A +L +K+RG L G+ F+ +G GF+ Sbjct: 27 RQALMGVMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFE 86 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F + L+ + + S P +L SK+ID++ + R+ Sbjct: 87 VEFAQQLAKHLGVEAS---LKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDF--ST 141 Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G ++ K + + + L G + V GT ++ + + ++ Sbjct: 142 PYTISGIQALVKKGNEGTLKTAADLKGKKVGVGLGT----NYEEWLRQNVQGVDVRTYDD 197 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R R DA D L AL L + + S+ A+ +G+ + Sbjct: 198 DPTKYQDLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLL 255 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 V+ M L + D T Sbjct: 256 KAVNGAIAEMQKDGTLQALSE--KWFGADVTK 285 >gi|254504149|ref|ZP_05116300.1| Bacterial extracellular solute-binding protein, family 3 [Labrenzia alexandrii DFL-11] gi|222440220|gb|EEE46899.1| Bacterial extracellular solute-binding protein, family 3 [Labrenzia alexandrii DFL-11] Length = 280 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 45/224 (20%), Positives = 86/224 (38%), Gaps = 11/224 (4%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 T A L D+ RG L+CG+ AN + GFDVD+C+ L++A+ + + Sbjct: 32 PTQADTLDDVVDRGELRCGVVLDFPPIGYRDANNEPAGFDVDYCKDLAAALEVEAT---I 88 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 P+ ER + + + D++ T +L R ++G Y+ QG ++ GI S Sbjct: 89 YPVTWAERLPVIVTGRADVVFGATSDSLARARTVGFTIPYAIYY-AQGV-VNADSGIESF 146 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + G + GT E + ++ ++ E+ A + D +A Sbjct: 147 EDIRGKRVAGAIGTVPEQEWLKIAEEWGEEHLYQGYQSENEVFLAVAQGKADIGITTNTA 206 Query: 201 LYALKLTNDRPSEHVILPD--IISKSPLAPAIIQGDTEWYNIVS 242 + + V+ + + + D W N ++ Sbjct: 207 V----KPITDQYDTVLAGPRMPWTTDYTSVVGKREDVTWLNFLN 246 >gi|160899821|ref|YP_001565403.1| extracellular solute-binding protein [Delftia acidovorans SPH-1] gi|160365405|gb|ABX37018.1| extracellular solute-binding protein family 3 [Delftia acidovorans SPH-1] Length = 318 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 49/237 (20%), Positives = 85/237 (35%), Gaps = 15/237 (6%) Query: 7 VSILCLIILFFTSFSTNASILG------DIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59 ++ L +A+ + IK+ G L+ G F+ + +G +GF Sbjct: 47 LNTAAFDALVAQGPVADAATIASSTWASKIKQTGTLRLGSTQTSNLFSLLNEKDGKIRGF 106 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D + L+ I D SK Q+ + + R L + Q D++ T R + A Sbjct: 107 DAGLAQLLTRYILGDASKYQFAQVTSSTREQVLINNQADMVIATYSITPARAEKISFA-- 164 Query: 120 PITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y G ++ K + S S L+G + QAG+T LA + F+ Sbjct: 165 GPYYTSQAGVLVKASNKTVQSYSDLAGKKVATQAGSTGPAILAQHAPKA----VVQEFQT 220 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 +E + R R DAY D + L + P ++ + +G Sbjct: 221 HQEALDSLRQGRVDAYVTDYTLLLNTLSLGTGDARLAGAP-FGAQDSYGIGLPKGSD 276 >gi|170679839|ref|YP_001743323.1| cystine transporter subunit [Escherichia coli SMS-3-5] gi|170517557|gb|ACB15735.1| cystine-binding periplasmic protein [Escherichia coli SMS-3-5] Length = 266 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 47/272 (17%), Positives = 93/272 (34%), Gaps = 17/272 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + ++ + + S + A +L +K+RG L G+ F+ +G GF+ Sbjct: 8 RQALMGVMAVALGAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFE 67 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F + L+ + + S P +L SK+ID++ + R+ Sbjct: 68 VEFAQQLAKHLGVEAS---LKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDF--ST 122 Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G ++ K + + + L G + V GT ++ + + ++ Sbjct: 123 PYTISGIQALVKKGNEGTLKTAADLKGKKVGVGLGT----NYEEWLRQNVQGVDVRTYDD 178 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R R DA D L AL L + + S+ A+ +G+ + Sbjct: 179 DPTKYQDLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLL 236 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 V+ M L + D T Sbjct: 237 KAVNDAIAEMQKDGTLQALSE--KWFGADVTK 266 >gi|146282694|ref|YP_001172847.1| cystine transporter subunit [Pseudomonas stutzeri A1501] gi|145570899|gb|ABP80005.1| cystine ABC transporter, periplasmic cystine binding protein [Pseudomonas stutzeri A1501] Length = 264 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 45/251 (17%), Positives = 86/251 (34%), Gaps = 15/251 (5%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + A +L +IK G L+ G+ F +G+ GF+VDF AL+ + K ++ Sbjct: 26 AFAADLLDEIKSNGTLEVGLEGTYPPFNYQDESGELTGFEVDFANALAEELG---VKAEF 82 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--IS 138 P AL+SK++D++ + R+ G + K I Sbjct: 83 QPTKWDGILAALESKRLDVVINQVTISEERKQKYDF--STPYTVSGIQALTRKADADSIK 140 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + L+G + V GT E L + + ++ R D D Sbjct: 141 LPTDLAGKKVGVGLGTNYEQWLKENVPQAD----IRTYDDDPTKFQDLAVGRIDVILVDR 196 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 L A ++ + + + S+ A+ +G+ + ++ + L Sbjct: 197 --LAAFEMVEKTGNRLAVAGEAFSRQESGVALRKGNPQLLAAINEAIAKLRADGTLKELS 254 Query: 259 KNINQVSKDTT 269 + D T Sbjct: 255 E--KWFGADVT 263 >gi|315145195|gb|EFT89211.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX2141] gi|315161882|gb|EFU05899.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX0645] Length = 277 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 53/279 (18%), Positives = 97/279 (34%), Gaps = 17/279 (6%) Query: 1 MYKDFFVSIL--CLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + +++L C +L F +N I + + G++ V +G Sbjct: 2 MKKKYSLALLVICCSLLLFAGCGKRKSNEDQWTRINEEKRIIIGLDDSFVPMGFQDKSGK 61 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFDVD +A+ + + P++ + LQ++ ID++ T R + Sbjct: 62 IVGFDVDLAKAVFKLYGIS---VDFQPIDWSMKETELQNQTIDLIWNGYTKTSERAEKVQ 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYH 172 + Q + K K I++ S + G + VQ G++ D K Sbjct: 119 FTQ--PYMTNDQVLVSLKVKNIATASDMQGKILGVQNGSSGYDGFESQPDVLKKFVKDQT 176 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 PI+++ E ++ R D D D + I A + + Sbjct: 177 PILYDGFNEAFLDLKSGRIDGLLIDRVYANYYLSHEDNLKNYTISHVGYDNEDFAVGVRK 236 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQK-NINQVSKDTTN 270 D + V + A T + G K + +D TN Sbjct: 237 SDNQL---VQKINTAFETLRKDGTLSKISQKWFGEDVTN 272 >gi|261407770|ref|YP_003244011.1| family 3 extracellular solute-binding protein [Paenibacillus sp. Y412MC10] gi|261284233|gb|ACX66204.1| extracellular solute-binding protein family 3 [Paenibacillus sp. Y412MC10] Length = 255 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 49/284 (17%), Positives = 106/284 (37%), Gaps = 35/284 (12%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG--FLKCGINTGLVGFAEVKANGDWKG 58 M K S+L +L T ++S G L GI+ + + G Sbjct: 1 MKK--IASVLAGFMLLLTVVGCSSS------ASGGNELVVGIDDKFAPMGFRDESNEIVG 52 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD+D+ RA + + + +++ P++ K + L S +ID++ T R+ + Sbjct: 53 FDIDYARAAAEKMGKE---VKFQPIDWKSKESELSSGRIDLIWNGYTITDERKEKVLF-- 107 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + Q + I+S+S L+G + +Q+ ++ L+ + H F Sbjct: 108 TKPYLENSQVVAVLADSDIASISDLAGKQVGLQSLSSAADALSAN-EIHTQVKKINEFPD 166 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + + R +A D + + + IL + ++ + +G+ E Sbjct: 167 NMLALSDLKNGRVEAVIIDEVVMKYFMSKEE--GTYKILEESLAPEQYGIGVKKGNEELL 224 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV-QRFLGIDK 281 + QK +++++ D T + +++ G DK Sbjct: 225 ESL----------------QKALDEMNADGTAAKISEKWFGEDK 252 >gi|300859857|ref|ZP_07105945.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TUSoD Ef11] gi|300850675|gb|EFK78424.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TUSoD Ef11] Length = 276 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 53/279 (18%), Positives = 97/279 (34%), Gaps = 17/279 (6%) Query: 1 MYKDFFVSIL--CLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + +++L C +L F +N I + + G++ V +G Sbjct: 1 MKKKYSLALLVICCSLLLFAGCGKRKSNEDQWTRINEEKRIIIGLDDSFVPMGFQDKSGK 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFDVD +A+ + + P++ + LQ++ ID++ T R + Sbjct: 61 IVGFDVDLAKAVFKLYGIS---VDFQPIDWSMKETELQNQTIDLIWNGYTKTSERAEKVQ 117 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYH 172 + Q + K K I++ S + G + VQ G++ D K Sbjct: 118 FTQ--PYMTNDQVLVSLKVKNIATASDMQGKILGVQNGSSGYDGFESQPDVLKKFVKDQT 175 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 PI+++ E ++ R D D D + I A + + Sbjct: 176 PILYDGFNEAFLDLKSGRIDGLLIDRVYANYYLSHEDNLKNYTISHVGYDNEDFAVGVRK 235 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQK-NINQVSKDTTN 270 D + V + A T + G K + +D TN Sbjct: 236 SDNQL---VQKINTAFETLRKDGTLSKISQKWFGEDVTN 271 >gi|158421866|ref|YP_001523158.1| extracellular solute-binding protein [Azorhizobium caulinodans ORS 571] gi|158328755|dbj|BAF86240.1| extracellular solute-binding protein [Azorhizobium caulinodans ORS 571] Length = 282 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 44/261 (16%), Positives = 92/261 (35%), Gaps = 12/261 (4%) Query: 1 MYKDFFVSILCLIILF--FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + +S+LC+ + + L I+ R ++ + T + V + +G Sbjct: 20 MDRRSILSLLCVSAMLGLAAPAAHAEDALEAIQSRKAVRIAVPTDYPPYGFVGPDLKPQG 79 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 D+D + + K++ +P+++ R LQ+ ++D++ RE L + Sbjct: 80 LDIDMAELIGKKMG---VKVELVPVSSANRIPYLQTGKVDLVISTLGKNAEREKVLDFSS 136 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 ++ Q K + + ++G S+ V G + L +E Sbjct: 137 AYAPFY--QAVFGGKSVPVKAPGDMAGHSVAVTRGAMEDQELEKVTP---PGVTVKRYED 191 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 AAY A + + IS+ A + P + +I +SP I +G+ Sbjct: 192 NAATAAAYVAGQTELVA--ISSAAAGTIMMKNPQTNTEFKFLIKESPCFIGIAKGEDTLK 249 Query: 239 NIVSWTHYAMVTAEELGITQK 259 V+ + K Sbjct: 250 AKVNAIIAEAKKDGTIDAMSK 270 >gi|227545108|ref|ZP_03975157.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri CF48-3A] gi|300909220|ref|ZP_07126681.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri SD2112] gi|68160911|gb|AAY86901.1| lr1730 [Lactobacillus reuteri] gi|227184896|gb|EEI64967.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri CF48-3A] gi|300893085|gb|EFK86444.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri SD2112] Length = 294 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 47/250 (18%), Positives = 96/250 (38%), Gaps = 12/250 (4%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 IKKRG L G++ V K NG G+DVD RA++ + K + ++ Sbjct: 38 DTWERIKKRGTLLIGVDDTFVPMDFRKKNGQLVGYDVDLSRAVAKVLG---LKADFQSID 94 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 + L++ ID + T R+ + + + GQ ++ K I + + + Sbjct: 95 WSMKETELKNGTIDCIWNGYTATPSRQKRIAFSR--VYELSGQSLVVRKDSKIKNFADMK 152 Query: 145 GASICVQAGTTTELTLADY---FKAHNMKYHPIVFERVEEIDAAYRAHRCD-AYTGDISA 200 G ++ +Q +T + Y K PI+++ +A R G + A Sbjct: 153 GKTLGIQESSTAQTDFDKYPQVLKKLVKGQKPILYQDNSSAFMDLQAGRTQGVLAGTVYA 212 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 Y + + +I +A + +GD +++ +YA+ ++ G ++ Sbjct: 213 GYYATHIANNNNYKLISASAYPADRVAIGMRKGD---RTLINKINYALGVLQKDGTLRRI 269 Query: 261 INQVSKDTTN 270 + +N Sbjct: 270 NKKWLGINSN 279 >gi|323697765|ref|ZP_08109677.1| extracellular solute-binding protein family 3 [Desulfovibrio sp. ND132] gi|323457697|gb|EGB13562.1| extracellular solute-binding protein family 3 [Desulfovibrio desulfuricans ND132] Length = 286 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 48/246 (19%), Positives = 94/246 (38%), Gaps = 18/246 (7%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 S L I KRG ++ G +T +A NGD+ GF+++ R L+ + K++++P Sbjct: 45 GSQLDVILKRGTIRVGFDT-FKPWAMKDKNGDYIGFEIEVARQLAKDMG---VKVEFVPT 100 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVS 141 AL + + DI+ T R + + + + G + +K +G +S+ Sbjct: 101 KWSGIIPALLTGKFDIIIGGMSVTPQRNLKVNFSL--PYEYSGMSIVASRKLAEGRASIE 158 Query: 142 QLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + G +I V+ GTT ++ + + F+ + R A Sbjct: 159 DFNNPGTTIAVRLGTTAAEAAKNFLPQAKILF----FDEESQTIQELLNERVHAVVASNP 214 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L + L D ++ P+A A+ +GD + ++W + + G Q Sbjct: 215 LPLTLSKEYAD-QLFLPLKDDFTREPIAFAVKKGD---LDFLNWLNNWVRVTMSKGWLQN 270 Query: 260 NINQVS 265 Sbjct: 271 RYEYWF 276 >gi|161502924|ref|YP_001570036.1| cystine transporter subunit [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160864271|gb|ABX20894.1| hypothetical protein SARI_00983 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 282 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 96/268 (35%), Gaps = 18/268 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + ++ + ++ S + A +L +++RG L G+ F+ +G GF+ Sbjct: 24 RQALMGVMAVALVAGMSAKSFADEGLLNKVRERGTLLVGLEGTYPPFSFQGDDGKLTGFE 83 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDF AL+ + K P +L SK+ID++ + +R+ Sbjct: 84 VDFAEALAKHLG---VKASLKPTKWDGMLASLDSKRIDVVINQVTISDVRKKKYDF--ST 138 Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G ++ K I + ++L G + V GT ++ + H ++ Sbjct: 139 PYTVSGVQALVKKGNEGTIKTAAELQGKKVGVGLGT----NYEEWLRQHVQGVDIRTYDD 194 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R R DA D L AL L + D S+ A+ +G+ + Sbjct: 195 DPTKYQDLRVGRIDAILVDR--LAALDLVKKTKGTLAVTGDAFSRQESGVALRKGNEDLL 252 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSK 266 V A+ ++ G + + Sbjct: 253 KAVD---NAIAEMQKDGTLKAISEKWFG 277 >gi|170700296|ref|ZP_02891309.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] gi|170134783|gb|EDT03098.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] Length = 317 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 49/237 (20%), Positives = 81/237 (34%), Gaps = 13/237 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSK 77 + S L I +R + G+ F + A GF+VD ++ + D Sbjct: 62 GVARADSTLDRIHQRHKISIGVILSGPPFGSLDPATQKQVGFNVDLANDVAKRLGVDA-- 119 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD-GQGFIMHKKKG 136 + P+ R LQ ++D L N + T R + L++ P + G I G Sbjct: 120 -ELTPVQPSNRVQFLQQGKVDALIANMELTTER--AEILSYAPTPFESIGGALIARTDSG 176 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 I S + L G +CV G+ L A F E A R + C A Sbjct: 177 IKSWADLRGKPVCVSQGSNYTKPL-----AAEYGAQVKAFRGQPESLLALRGNNCVAAVH 231 Query: 197 DISALYALKLTNDRPSEHVI-LPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 L L N ++ L + SP + +G+T+ + + + Sbjct: 232 VAPTLRMLVARNPDWKDYTTPLSTDLIPSPAVIWVRKGETDTQSALDRIVQDWHRSG 288 >gi|307729488|ref|YP_003906712.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1003] gi|307584023|gb|ADN57421.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1003] Length = 264 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 56/273 (20%), Positives = 103/273 (37%), Gaps = 21/273 (7%) Query: 3 KDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K F + LI FT+ + +A +L +K+RG L+ G+ F +G+ G+DV Sbjct: 7 KKLF--AVALIGASFTAVAAHAEDLLDQVKQRGTLRVGLEGTFPPFNSKAPSGELVGYDV 64 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D +A+++ + P +++ LQ+ + D++ T R+ +L P Sbjct: 65 DIAKAVAARLGVKP---EFITTEWSGIIAGLQAGKFDVIVNQVGITDARKQALDF--SPA 119 Query: 122 TYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + I K S+ L G + V G T + +A ++K +P Sbjct: 120 YTYSAAQLIQRKDDTRQFKSLDDLKGKKLGVGLG-TNYMDMAKSVPGIDVKTYPGA---- 174 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A R DA D L L + P ++ + +P + + ++ Sbjct: 175 PEYLRDLAAGRLDAALNDRLMLAYLLKNSQLP--LRTGANVGAGNPSGIPFKKNNPKFAK 232 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSK-DTTNP 271 + AM E G K ++ D + P Sbjct: 233 AIDD---AMTQLEADGTFAKISDKWFGIDVSKP 262 >gi|319782449|ref|YP_004141925.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168337|gb|ADV11875.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 268 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 55/241 (22%), Positives = 90/241 (37%), Gaps = 14/241 (5%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L DI KRG L+ + T F+ V ANG+ G V+ ++ + KI +L + Sbjct: 30 TLDDITKRGELRVAVQTQGPPFSLVGANGERTGSSVELAELMAKEMG---VKITFLDFDW 86 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ--L 143 AL S + D+L + TL R + +AF + G + Sbjct: 87 DGLIPALLSGKADLLVADMTPTLAR--GMKVAFTTPYMYTGSTVFTKADSKFKTTEDCKA 144 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 G I V G T E + F ++K + + A + D D+SA+ Sbjct: 145 KGTKIAVLLGATGEKEAKNAFPDADIKSYKGGG---PLLLDAVNNGQADCGVNDVSAVKG 201 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 I+PD++SK PLA A + + ++ + G QKN++ Sbjct: 202 QSTAYPA-GTFTIMPDLLSKEPLAFATRYDEPDLLIWMNLFLNQVTI---DGRLQKNLDY 257 Query: 264 V 264 Sbjct: 258 W 258 >gi|204930952|ref|ZP_03221778.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204319996|gb|EDZ05201.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 266 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 95/268 (35%), Gaps = 18/268 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + ++ + ++ S + A +L +K+RG L G+ F+ +G GF+ Sbjct: 8 RQALMGVMAVALVAGMSAKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGEDGKLTGFE 67 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDF AL+ + K P +L +K+ID++ + +R+ Sbjct: 68 VDFAEALAKHLG---VKASLKPTKWDGILASLDAKRIDVVINQVTISDVRKKKYDF--ST 122 Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G ++ K I + + L G + V GT ++ + H ++ Sbjct: 123 PYTISGVQALVKKGNEGTIKTAADLQGKKVGVGLGT----NYEEWLRQHVQGVDIRTYDD 178 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R R DA D L AL L + D S+ A+ +G+ + Sbjct: 179 DPTKYQDLRIGRIDAILVDR--LAALDLVKKTKGTLAVTGDAFSRQESGVALRKGNEDLL 236 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSK 266 V A+ ++ G + + Sbjct: 237 KAVD---NAIAEMQKDGTLKALSEKWFG 261 >gi|241206673|ref|YP_002977769.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860563|gb|ACS58230.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 265 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 49/274 (17%), Positives = 103/274 (37%), Gaps = 18/274 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + K + + + + + + A L DIK G + GI + F+ A+ KG+D Sbjct: 4 LMKLRYTATAAIAVFGILAGAAQADELADIKAAGEINIGIFSDFPPFSSASADMSIKGYD 63 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + ++ + K+ + + + R L ++D+L + ++ R + A Sbjct: 64 VDVAQKIADGLG---VKLNLVSVTGQNRIAYLNDDRVDLLM-SVGYSKERAEVIDFAAPY 119 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+ I +S L+ ++ V GT + +L FE Sbjct: 120 APYY--IAVIGPAALKVSGKEDLADKTVAVNRGTLEDTSLTAVAPGSAA---IQRFENYN 174 Query: 181 EIDAAYRAHRCDAYT--GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + A+ + + D+ A + +P + + SP A+ +G+ Sbjct: 175 SVIQAFISGQTQLMVVGNDVGAQVLARQDELKPEQ----KFQLLSSPSHIALRKGEEGLK 230 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272 +V+ + AM++ L + K+ K NP+ Sbjct: 231 KVVNDSVAAMISDGSLDASSKS---WLKAPLNPE 261 >gi|170692242|ref|ZP_02883405.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] gi|170142672|gb|EDT10837.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] Length = 264 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 57/273 (20%), Positives = 103/273 (37%), Gaps = 21/273 (7%) Query: 3 KDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K FV+ +I FT+ +A +L +K+RG L+ G+ F +G+ G+DV Sbjct: 7 KKLFVA--AMIGASFTAIPAHADDLLDQVKQRGTLRVGLEGTFPPFNSKAPSGELVGYDV 64 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D +A+++ + P +++ LQ+ + D++ T R+ SL P Sbjct: 65 DIAKAVAAKLGVKP---EFITTEWSGIIAGLQAGKFDVIVNQVGITDARKQSLDF--SPA 119 Query: 122 TYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + I K S+ L G + V G T + +A ++K +P Sbjct: 120 YTYSAAQLIQRKDDTRQFKSLDDLKGKKLGVGLG-TNYMDMAKSVPGIDVKTYPGA---- 174 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A R DA D L L + P ++ + +P + + ++ Sbjct: 175 PEYLRDLAAGRLDAALNDRLMLAYLLKNSQLP--LRTGANVGAGNPSGIPFKKNNPKFAK 232 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSK-DTTNP 271 + AM E G K ++ D + P Sbjct: 233 AIDD---AMTQLETDGTFAKISDKWFGIDVSKP 262 >gi|206576658|ref|YP_002237705.1| cystine ABC transporter, periplasmic cystine-binding protein [Klebsiella pneumoniae 342] gi|288934565|ref|YP_003438624.1| extracellular solute-binding protein family 3 [Klebsiella variicola At-22] gi|290508765|ref|ZP_06548136.1| cystine transport system substrate-binding protein [Klebsiella sp. 1_1_55] gi|206565716|gb|ACI07492.1| cystine ABC transporter, periplasmic cystine-binding protein [Klebsiella pneumoniae 342] gi|288889274|gb|ADC57592.1| extracellular solute-binding protein family 3 [Klebsiella variicola At-22] gi|289778159|gb|EFD86156.1| cystine transport system substrate-binding protein [Klebsiella sp. 1_1_55] Length = 266 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 48/272 (17%), Positives = 94/272 (34%), Gaps = 17/272 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + + ++++ S T A+ +L +K+RG L+ G+ F+ +G GF+ Sbjct: 8 RQALMGAMAVVLMAGVSVKTFAAENLLNQVKERGTLRVGLEGTYPPFSFQGDDGKLTGFE 67 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F L+ + K P +L SK+ID++ + R+ Sbjct: 68 VEFANELAKHLG---VKADLKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDF--ST 122 Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G ++ K I + + L G + V GT ++ + + ++ Sbjct: 123 PYTISGVQALVKKGNEGAIKTAADLKGKKVGVGLGT----NYEEWLRQNVQGVDVRTYDD 178 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R R DA D L AL L + + + S+ A+ +G+ + Sbjct: 179 DPTKYQDLRVGRIDAILVDR--LAALDLVKKTNNTLAVTGEAFSRQEAGVALRKGNDDLL 236 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 + M L + D T Sbjct: 237 KAIDAAIADMQKDGTLKALSE--KWFGADVTK 266 >gi|323142139|ref|ZP_08076984.1| glutamine ABC transporter, periplasmic glutamine-binding protein GlnH [Phascolarctobacterium sp. YIT 12067] gi|322413399|gb|EFY04273.1| glutamine ABC transporter, periplasmic glutamine-binding protein GlnH [Phascolarctobacterium sp. YIT 12067] Length = 274 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 49/271 (18%), Positives = 91/271 (33%), Gaps = 18/271 (6%) Query: 1 MYKDFFV--SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WK 57 M K F+ ++L + + +K L+ G F K + Sbjct: 17 MKKILFLVMAVLTAASMMIAGCGGGDKKAAEPEK--VLRVGTEPTFAPFEFQKEGSKSYD 74 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D RA+ + K++ + + AL S ID+++ R+ ++ + Sbjct: 75 GFDMDLARAIGKQMGY---KVEIVSMGFDALIPALNSGNIDVVAAGMSINEERQKAVTFS 131 Query: 118 FRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 Y G +++K + SV L G I Q GTT E + A F Sbjct: 132 E--PYYTSGLIVMVNKDNNEVKSVKDLEGKRIACQIGTTGEKNARNVANA-----KVTAF 184 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 +E + DA D + + + DI+ A+ +G+ + Sbjct: 185 NTNDEAVMELKNKGVDAIINDSPVVGYYLAQGGN-ASMKTVGDIMEAEQYGLAVKKGNDK 243 Query: 237 WYNIVSWTHYAMVTAEEL-GITQKNINQVSK 266 ++ + E I + +V K Sbjct: 244 LAGEINKALAELKKNGEYDKIYKTWFGEVKK 274 >gi|159026759|emb|CAO86640.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 276 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 53/281 (18%), Positives = 91/281 (32%), Gaps = 24/281 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKG 58 M K+F++ L L+++ S A L I + G LK F+ + G W G Sbjct: 1 MSKNFWLIFLGLLLINNLHLSVLAETVLQRIARTGELKAAARKDATPFSYIDEKTGQWTG 60 Query: 59 FDVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + V+ R + + P I + RF ++ Q+ + T R + Sbjct: 61 YGVELMRLVQRRLAQELGKPITITFTEATTNNRFQQVEQGQVYLSCNTATITEERLEKVN 120 Query: 116 LAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + G F+ ++ I + L+ +I TTT+ + + N + Sbjct: 121 F--STPYFMTGAQFLTKRENVDKIDINNTLAAVAIAYIPHTTTDSIIRYIYPLANWQ--- 175 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYA-LKLTNDRPSEHVILP-DIISKSPLAPAII 231 E A + A D L L P + V+LP I+ + Sbjct: 176 -AVSDRSEAVAKLQRGEVKAVVSDGILLLGELVKQGQDPRQFVLLPSQPITTELYGCILP 234 Query: 232 QGDTEWYNIVSWTH---------YAMVTAEELGITQKNINQ 263 + D EW V EE + +NQ Sbjct: 235 KNDPEWKKFVDTVVGSNDNQKLREQWFNLEESSFPYRILNQ 275 >gi|223984171|ref|ZP_03634321.1| hypothetical protein HOLDEFILI_01614 [Holdemania filiformis DSM 12042] gi|223963867|gb|EEF68229.1| hypothetical protein HOLDEFILI_01614 [Holdemania filiformis DSM 12042] Length = 267 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 41/270 (15%), Positives = 92/270 (34%), Gaps = 16/270 (5%) Query: 4 DFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + ++ L ++ T + A ++ +G L GI+ N + G+ Sbjct: 7 KLGMGLIGLALVAMTGCQSAAKPQEDSWSALEAKGKLVVGIDDTFAPMGFRDENNELTGY 66 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D++ +A+S + + ++ ++ + L + ID++ T R + + Sbjct: 67 DIEMAKAVSEKLG---LEFEFQTIDWSMKESELNAGNIDLIWNGYSITDTRRQQVAFSE- 122 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD--YFKAHNMKYHPIVFE 177 + Q I +S+ + L+G +I VQ ++ ++ + P F+ Sbjct: 123 -PYLENRQLIITLADSAVSTKADLAGKTIAVQKESSALEAVSADTALTSTLKNGAPEEFD 181 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + A R A D L + ++ +L + A + + DT Sbjct: 182 TNIDCFMDLEAGRSQAIVVDE-VLARYVMKQRGQEKYKVLDENFGTEQYAVGMRKQDTTL 240 Query: 238 YNIVSWTHYAMVTAEELGITQK-NINQVSK 266 ++ A E G T N + Sbjct: 241 LEKINEAMKAC---NEDGTTAALNAKWFGE 267 >gi|293365297|ref|ZP_06612014.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus oralis ATCC 35037] gi|307703837|ref|ZP_07640778.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus oralis ATCC 35037] gi|291316747|gb|EFE57183.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus oralis ATCC 35037] gi|307622672|gb|EFO01668.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus oralis ATCC 35037] Length = 279 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 47/280 (16%), Positives = 99/280 (35%), Gaps = 17/280 (6%) Query: 1 MYKDFFVSILCLIILFFT------SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M + +L L FF + + +K+G + G + V + NG Sbjct: 1 MKRKKIALVLALFFSFFLIACTQKASDPSQDNWAKYQKQGSITIGFDNTFVPMGFEEKNG 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + GFD+D +A+S + +I++ P++ + LQ+ ID + T R+ + Sbjct: 61 QYAGFDIDLAQAVSEKLG---IQIKFQPIDWDMKETELQNGTIDAIWNGYTATNERKEKV 117 Query: 115 GLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMK 170 I Y + Q ++ KK I S+ ++ + QAG++ L + K Sbjct: 118 AFT---IPYMENQQVLVSKKSQNIHSIQDMADKVLGAQAGSSGYLNFEGQPELLKNRVKD 174 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 ++ E + R DA D + +++ + A + Sbjct: 175 QKANQYQSFNEALIDLKNDRIDALVIDRVYANYYLQSEGILNDYNVFSAGFESEAFAVGV 234 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELG-ITQKNINQVSKDTT 269 D + ++ ++ + I+QK + + Sbjct: 235 RPADKTLLDALNQAFISLYQEGKFQEISQKWFGEDVATSQ 274 >gi|238788347|ref|ZP_04632141.1| Cystine-binding periplasmic protein [Yersinia frederiksenii ATCC 33641] gi|238723593|gb|EEQ15239.1| Cystine-binding periplasmic protein [Yersinia frederiksenii ATCC 33641] Length = 262 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 49/266 (18%), Positives = 83/266 (31%), Gaps = 16/266 (6%) Query: 1 MYKDFFVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M + V + + L +L +K+RG L G+ F+ +G Sbjct: 1 MVRRQVVLGMVAVALATGLNVKSYAAGDLLDQVKERGTLIVGLEGTYPPFSFQGEDGKLT 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GF+VDF AL+ + K + P +L+SK+ID+ + R+ Sbjct: 61 GFEVDFANALAEHMG---VKAKITPTKWDGMLASLESKRIDVAINQVTISEERKKKYDF- 116 Query: 118 FRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 G + K + L G + V G+ E L D K Sbjct: 117 -STPYTISGIQVLTKKGNEGKFNKPEDLEGKKVGVGLGSNYEQWLRDNLK----GVDIRT 171 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 ++ R R DA D L AL L + ++ A+ + + Sbjct: 172 YDDDPTKYQDLRVGRTDAILVDR--LAALDLVKKTNDTLAVAGPAFARQESGVALRKNNP 229 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNI 261 E ++ M L + Sbjct: 230 ELLAAINQAIAEMQKDGTLAKISEKY 255 >gi|241895706|ref|ZP_04783002.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Weissella paramesenteroides ATCC 33313] gi|241871073|gb|EER74824.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Weissella paramesenteroides ATCC 33313] Length = 277 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 42/260 (16%), Positives = 87/260 (33%), Gaps = 8/260 (3%) Query: 5 FFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 + +L LI FF S ++ + + G++ V +G G+DVD Sbjct: 17 LVIIVLALIGGFFWYRSVHSQDTWRQVTADKTVVIGVDDTFVPMGFRDKSGKLIGYDVDL 76 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 RA I K ++ P++ + L++ ID++ R+ + + Sbjct: 77 ARASLKKIG---LKAKFQPIDWSMKETELKTGHIDMIWNGYTINSDRKKKVAF--SNPYH 131 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA--HNMKYHPIVFERVEE 181 D Q + K + I+ +S L G + Q G++ LT + + + ++ ++ Sbjct: 132 HDRQVIVTMKNQQINKLSDLKGKRLGAQTGSSGLLTYTEKGNSLRKIVGSDAQQYDTFDK 191 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + R +A D P I+ + +GD N V Sbjct: 192 ALNDLQVGRLNAVLIDADYAGYYIAHEKDPEAFKIIQTNFGTDSYGVGMRKGDVTLRNKV 251 Query: 242 SWTHYAMVTAEELGITQKNI 261 + + + + Sbjct: 252 NEALAQVKKDGTIDKISQRY 271 >gi|145296749|ref|YP_001139570.1| hypothetical protein cgR_2653 [Corynebacterium glutamicum R] gi|140846669|dbj|BAF55668.1| hypothetical protein [Corynebacterium glutamicum R] Length = 344 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 42/220 (19%), Positives = 83/220 (37%), Gaps = 12/220 (5%) Query: 30 IKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 I RG + G++ + G+ +GF+V+ R +S IF DP+K+ + + + +R Sbjct: 89 IVNRGRIIVGVDQSQNLLSFRDPVTGELRGFEVELAREISRDIFGDPNKVDFRFVGSSDR 148 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 +L +DI+ R+ T R + + + GI+S++ L G +I Sbjct: 149 LRSLDQGDVDIVIRSVTITDERAKLVEF--STPYLRTQTRMLTMESSGITSIADLPGHTI 206 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 CV G+T+ + + + A + H+ GD L + + Sbjct: 207 CVTDGSTSLQRARTIAPEAS----ILKTRNWSDCLMALQQHQAQVILGDDVILSGIAAQD 262 Query: 209 DRPSEHVILPDIISKSPLAPAIIQG--DTEWYNIVSWTHY 246 IL + A +T+ ++ +Y Sbjct: 263 P---YTEILDTSLDSHSYGVAAASTTAETDSSGLIRQVNY 299 >gi|19553943|ref|NP_601945.1| ABC-type transport system, periplasmic component [Corynebacterium glutamicum ATCC 13032] gi|62391586|ref|YP_226988.1| ABC-type amino acid transport system, component [Corynebacterium glutamicum ATCC 13032] gi|21325522|dbj|BAC00144.1| ABC-type amino acid transport system, periplasmic component [Corynebacterium glutamicum ATCC 13032] gi|41326928|emb|CAF20772.1| ABC-type amino acid transport system, secreted component [Corynebacterium glutamicum ATCC 13032] Length = 344 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 42/220 (19%), Positives = 83/220 (37%), Gaps = 12/220 (5%) Query: 30 IKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 I RG + G++ + G+ +GF+V+ R +S IF DP+K+ + + + +R Sbjct: 89 IVNRGRIIVGVDQSQNLLSFRDPVTGELRGFEVELAREISRDIFGDPNKVDFRFVGSSDR 148 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 +L +DI+ R+ T R + + + GI+S++ L G +I Sbjct: 149 LRSLDQGDVDIVIRSVTITDERAKLVEF--STPYLRTQTRMLTMESSGITSIADLPGHTI 206 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 CV G+T+ + + + A + H+ GD L + + Sbjct: 207 CVTDGSTSLQRARTIAPEAS----ILKTRNWSDCLMALQQHQAQVILGDDVILSGIAAQD 262 Query: 209 DRPSEHVILPDIISKSPLAPAIIQG--DTEWYNIVSWTHY 246 IL + A +T+ ++ +Y Sbjct: 263 P---YTEILDTSLDSHSYGVAAASTTAETDSSGLIRQVNY 299 >gi|253574817|ref|ZP_04852157.1| cystine ABC transporter [Paenibacillus sp. oral taxon 786 str. D14] gi|251845863|gb|EES73871.1| cystine ABC transporter [Paenibacillus sp. oral taxon 786 str. D14] Length = 296 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 50/249 (20%), Positives = 92/249 (36%), Gaps = 11/249 (4%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 +S +T + +L +IK G +K G+ + + N + GFD D + ++ + K Sbjct: 51 SSANTGSDLLNEIKTAGVIKVGLMGTYAPYNFLNENKEIDGFDADVAKEVAKRLG---VK 107 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KG 136 +++ P +LQ+ +ID + T R+ + + I+ + Sbjct: 108 VEFAPQEFSGLIPSLQAGKIDAIISQVTITDERKQQIDFTQ--PYITNEVKIIVKEDNDS 165 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 I+ + G +I V GT E L + + ++ V A R DA Sbjct: 166 ITKLEDFKGKNIGVGLGTNDESYLRNDVLPQVGNFEIKTYDDVITSLQDLNAGRIDATIN 225 Query: 197 DISALYALKLTNDRPSEHV-ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + LYALK D+ + + D I AI + + E+ + M Sbjct: 226 N---LYALKPIVDKNGYKIKAVGDAIKSDQAGIAIRKNNPEFLAALDQALTDMKADGTYN 282 Query: 256 -ITQKNINQ 263 I QK + Sbjct: 283 TIFQKWFGE 291 >gi|190891147|ref|YP_001977689.1| probable amino acid ABC transporter, substrate-binding protein [Rhizobium etli CIAT 652] gi|190696426|gb|ACE90511.1| probable amino acid ABC transporter, substrate-binding protein [Rhizobium etli CIAT 652] Length = 264 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 51/254 (20%), Positives = 96/254 (37%), Gaps = 15/254 (5%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK-GFDVDFCRALS 68 + + +L T +A L +K RG L G+ F + + G+++D +AL+ Sbjct: 1 MSISLLAATQAFADA-TLDRVKARGALTVGVILSGAPFGYIDPTSQTQKGYNLDIAKALA 59 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 + K++ + + R LQ ++DIL N +T + + L + P Y G Sbjct: 60 DDLG---VKLETVTVTPPNRVQFLQQGKVDILIANMQYTE--DRAKVLDWVPTPYDRSGG 114 Query: 129 FIM-HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 + K G+ + L G +CV G+ L + + A E A + Sbjct: 115 AAVGRKDSGLKDWADLKGKPVCVSQGSNFTQPLIEKYGA-----EVKGLPSQPESLLALQ 169 Query: 188 AHRCDAYTGDISAL-YALKLTNDRPSEHVIL-PDIISKSPLAPAIIQGDTEWYNIVSWTH 245 C + L L+ + ++ IL P + S + +G+ E + T Sbjct: 170 GGNCVVAVHVGATLGLLLQDRPEDWKDYAILFPTELIPSDSVIWVRKGEKETAETLDKTI 229 Query: 246 YAMVTAEELGITQK 259 + T+ +L K Sbjct: 230 RQLHTSGKLLEFAK 243 >gi|326797153|ref|YP_004314973.1| ABC-type transporter periplasmic subunit family 3 [Marinomonas mediterranea MMB-1] gi|326547917|gb|ADZ93137.1| ABC-type transporter, periplasmic subunit family 3 [Marinomonas mediterranea MMB-1] Length = 268 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 52/267 (19%), Positives = 96/267 (35%), Gaps = 16/267 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 +K + L T+ ++ AS + I LK G + F +G + GFD+ Sbjct: 5 FKKALTGLALAGSLLATTQASAASAIDGILSSNELKVCFEAGYIPFEMKTKDGRFIGFDI 64 Query: 62 DFCRALSSAIFDDPSKIQYLPLN--AKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D + ++ ++ ++++P+N ALQ+++ DI+ T R + + + Sbjct: 65 DLGKHMARSM-----DVKFVPVNTAWDGIIPALQTEKCDIIMGGMTVTAQRNLKVMFSNP 119 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 IT K I+S L+ +I Q GTT Y +FE Sbjct: 120 YITIGQTVVIKPELKGTITSYKDLNNPKYTITSQIGTTGAEAAKKYLPKA----KLDLFE 175 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + + DA+ D+ + ++ V L + + PL AI Q D + Sbjct: 176 TSADGVLQVANGKADAFVYDLP--FNALYSSQHKDTVVHLDESFTYEPLGWAIRQDDPNF 233 Query: 238 YNIVSWTHYAMVTAEELG-ITQKNINQ 263 N ++ + I K Sbjct: 234 LNFLNNYLTQIKNDGTYDRIYSKWFES 260 >gi|323180829|gb|EFZ66369.1| cystine-binding periplasmic protein [Escherichia coli 1180] Length = 255 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 47/266 (17%), Positives = 88/266 (33%), Gaps = 15/266 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V + L+ + +L +K+RG L G+ F+ +G GF+V+F + Sbjct: 3 VMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 62 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + + S P +L SK+ID++ + R+ G Sbjct: 63 LAKHLGVEAS---LKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDF--STPYTISG 117 Query: 127 QGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K I + + L G + V GT ++ + + ++ Sbjct: 118 IQALVKKGNEGTIKTAADLKGKKVGVGLGT----NYEEWLRQNVQGVDVRTYDDDPTKYQ 173 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 R R DA D L AL L + + S+ + +G+ + V+ Sbjct: 174 DLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVTLRKGNEDLLKAVNDA 231 Query: 245 HYAMVTAEELGITQKNINQVSKDTTN 270 M L + D T Sbjct: 232 IAEMQKDGTLQALSE--KWFGADVTK 255 >gi|167628320|ref|YP_001678819.1| amino acid abc transporter, amino acid-binding protein, putative [Heliobacterium modesticaldum Ice1] gi|167591060|gb|ABZ82808.1| amino acid abc transporter, amino acid-binding protein, putative [Heliobacterium modesticaldum Ice1] Length = 273 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 45/259 (17%), Positives = 87/259 (33%), Gaps = 10/259 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M ++ +++ NA + KK+ + G F G+ GF Sbjct: 17 MRIGCTAALAAGLLVSLAGCGGNAPATTATAKKK--IVVGTEATYRPFEWKDEQGEIIGF 74 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD R + I + ++ LQ++ ID+++ T R+ S+G Sbjct: 75 DVDLAREIGKEIGVE---VEIKNTPFDNLIAELQNQSIDMIASAMTITEKRKESIGF--S 129 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y Q I+ + I +++ L ++ VQ GTT + + FE + Sbjct: 130 KPYYDSVQAIIVKEGSPIKTLADLKDKNVGVQNGTTGMGVAEKLLGERSTRIK--RFETL 187 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R DA D + N ++ + K A+ +GD E Sbjct: 188 PDALNTLRIDGLDAVIADKPVAQNYLVNNPDAKLLILEDTSLEKEQFGFAVRKGDRELQQ 247 Query: 240 IVSWTHYAMVTAEELGITQ 258 ++ + ++ Sbjct: 248 QINDALDKLEKNGKIKELS 266 >gi|157145288|ref|YP_001452607.1| cystine transporter subunit [Citrobacter koseri ATCC BAA-895] gi|157082493|gb|ABV12171.1| hypothetical protein CKO_01025 [Citrobacter koseri ATCC BAA-895] Length = 273 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 48/272 (17%), Positives = 92/272 (33%), Gaps = 17/272 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + ++ + ++ S + A +L +K+RG L G+ F+ +G GF+ Sbjct: 15 RQALMGVMAVALVAGMSVKSYADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFE 74 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F L+ + K P +L SK+ID++ + R+ Sbjct: 75 VEFAEELAKHLG---VKASLKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDF--ST 129 Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G ++ K I++ + L G + V GT ++ + + ++ Sbjct: 130 PYTISGIQALVKKGNEGSINTAADLKGKKVGVGLGT----NYEEWLRQNVQGVDIRTYDD 185 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R R DA D L AL L + + S+ A+ +G+ + Sbjct: 186 DPTKYQDLRVGRIDAILVDR--LAALDLVKKTKDTLAVTGEAFSRQEAGVALRKGNEDLL 243 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 V M L + D T Sbjct: 244 KAVDGAIADMQKDGTLKALSE--KWFGADVTK 273 >gi|18310306|ref|NP_562240.1| amino acid ABC transporter [Clostridium perfringens str. 13] gi|18144986|dbj|BAB81030.1| probable amino acid ABC transporter [Clostridium perfringens str. 13] Length = 262 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 44/246 (17%), Positives = 91/246 (36%), Gaps = 12/246 (4%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 ++ + K + GI+ V GD GFDVD + + K+ + P Sbjct: 22 SSKKIETKKDSNTVIIGIDDTFVPMGFKNEKGDIVGFDVDLAKEAFKRM---NLKVIFQP 78 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 ++ + L + ID++ T RE + + Q + I++++ Sbjct: 79 IDWSMKETELTNGNIDLIWNGYTMTHEREKKVAFTNS--YLKNRQVIVTLSNSNINTLND 136 Query: 143 LSGASICVQAGTTTELTLADY--FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L G ++ Q G+++ TL + P++F+ + A R DA D Sbjct: 137 LKGKTVTTQDGSSSLDTLFENPELTKSFKNGEPVLFDSFNDCFMDLEAGRSDAVVCDEIL 196 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 N PS+ +L + + + + + + ++ + ++ T M +E G K Sbjct: 197 AQYYIFKN-GPSKFHVLTEDLGEESYSIGLRK-NSNLIDPLNKTLEDM---KEDGTIAKI 251 Query: 261 INQVSK 266 N+ Sbjct: 252 SNKWFG 257 >gi|121609557|ref|YP_997364.1| extracellular solute-binding protein [Verminephrobacter eiseniae EF01-2] gi|121554197|gb|ABM58346.1| extracellular solute-binding protein, family 3 [Verminephrobacter eiseniae EF01-2] Length = 265 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 36/241 (14%), Positives = 81/241 (33%), Gaps = 14/241 (5%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 + +I KRG L I+T + ++ A+ +G DV ++ + ++ +P+ + Sbjct: 29 TVDEIIKRGKLLVAIDTNNPPWGQMNASMQPEGIDVGVANLMAKYMGVP---LEIVPVTS 85 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 + R + + + D++ T R +L + + + I S L+G Sbjct: 86 QNRIPFIVTGKADVVMATLTITPQR--ALQIWYSIPYALQDSVIMTTDNSPIKSFDDLNG 143 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 + V G + + M+ F+ A A + DA L + Sbjct: 144 KRVSVVRGAIQDALVTRMAPRAQMQ----RFDNDASTIQALVAGQVDASAT--GFLIPAQ 197 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 T P + + + + + + +++ WT+ + G Q Sbjct: 198 TTKANPGKTYVSRLKLGTQHIGIGMKRNSP---DLLQWTNTFIYHIRANGELSDLFKQYF 254 Query: 266 K 266 Sbjct: 255 G 255 >gi|123442746|ref|YP_001006723.1| cystine transporter subunit [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122089707|emb|CAL12559.1| putative cystine-binding periplasmic protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 266 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 46/264 (17%), Positives = 84/264 (31%), Gaps = 15/264 (5%) Query: 2 YKDFFVSILCLIILFFTSFS--TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + + ++ + + + +L +K+RG L G+ F+ +G GF Sbjct: 7 RRRVVLGMMAVALATGLNVKSYAAGDLLDQVKERGTLIVGLEGTYPPFSFQGEDGKLTGF 66 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 +VDF AL+ + K + P +L+SK+ID+ + R+ Sbjct: 67 EVDFANALAEHMG---VKAKITPTKWDGMLASLESKRIDVAINQVTISDERKKKYDF--S 121 Query: 120 PITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 G + K S L G + V G+ E L + K ++ Sbjct: 122 TPYTVSGIQVLTKKGNEGKFSKPEDLVGKKVGVGLGSNYEQWLRENLK----DVDIRTYD 177 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 R R DA D L AL L + ++ A+ + + E Sbjct: 178 DDPTKYQDLRVGRTDAILVDR--LAALDLVKKTNDTLAVAGPAFARQESGVALRKNNPEL 235 Query: 238 YNIVSWTHYAMVTAEELGITQKNI 261 ++ M L + Sbjct: 236 LAAINQAIAEMQKDGTLAKISEKY 259 >gi|56413131|ref|YP_150206.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197362057|ref|YP_002141694.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56127388|gb|AAV76894.1| cystine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197093534|emb|CAR58996.1| cystine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 266 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 95/268 (35%), Gaps = 18/268 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + ++ + ++ S + A +L +K+RG L G+ F+ +G GF+ Sbjct: 8 RQALMGVMAVALVAGMSAKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGEDGKLTGFE 67 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDF AL+ + K P +L +K+ID++ + +R+ Sbjct: 68 VDFAEALAKHLG---VKASLKPTKWDGILASLDAKRIDVVINQVTISDVRKKKYDF--ST 122 Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G ++ K I + + L G + V GT ++ + H ++ Sbjct: 123 PYTVSGVQALVKKGNEGTIKTAADLQGKKVGVGLGT----NYEEWLRQHVQGVDIRTYDD 178 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R R DA D L AL L + D S+ A+ +G+ + Sbjct: 179 DLTKYQDLRVGRIDAILVDR--LAALDLVKKTKGTLAVTGDAFSRQESGVALRKGNEDLL 236 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSK 266 V A+ ++ G + + Sbjct: 237 KAVD---NAIAEMQKDGTLKALSEKWFG 261 >gi|225022582|ref|ZP_03711774.1| hypothetical protein CORMATOL_02622 [Corynebacterium matruchotii ATCC 33806] gi|224944650|gb|EEG25859.1| hypothetical protein CORMATOL_02622 [Corynebacterium matruchotii ATCC 33806] Length = 333 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 46/243 (18%), Positives = 88/243 (36%), Gaps = 18/243 (7%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 +I RG L GI+ + G+ +GF+VD + +++ IF +P+KI++ +++ Sbjct: 81 EIISRGRLIVGIDQSQNLLSFRNTITGELQGFEVDIAKEIAADIFGNPTKIEFRYVDSAN 140 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 +L+S QID+ R T R+ + F ++HK I +S++ G Sbjct: 141 WIDSLESHQIDMAIRTLSIT--RDRQDQVFFSTPYLKGSTKILVHKSSAIKGISEIGGRP 198 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 +CV + +T Y + +V + + ++ A D L + Sbjct: 199 VCVTSQSTGI----HYARNLAPTSDLVVVRSSADCLIVMQQNQASAVITDDVILSGMSAQ 254 Query: 208 NDRPSEHVILPDIISKSPLA-----PAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 + I +S P ++ T + G QK N Sbjct: 255 DP---FTTIEGGSLSNENYGIATAKPGYRHHTDGLIRQINATLERIYG---DGTWQKYYN 308 Query: 263 QVS 265 Sbjct: 309 HWF 311 >gi|16765292|ref|NP_460907.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167993523|ref|ZP_02574617.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|4115511|dbj|BAA36399.1| FliY [Salmonella enterica subsp. enterica serovar Typhimurium] gi|16420489|gb|AAL20866.1| putative periplasmic binding transport protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|205328406|gb|EDZ15170.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|261247120|emb|CBG24943.1| cystine-binding periplasmic protein (FliY) [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267993940|gb|ACY88825.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301158468|emb|CBW17978.1| cystine-binding periplasmic protein (FliY) [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312912944|dbj|BAJ36918.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321224597|gb|EFX49660.1| Cystine ABC transporter, periplasmic cystine-binding protein FliY [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323130232|gb|ADX17662.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] Length = 266 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 95/268 (35%), Gaps = 18/268 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + ++ + ++ S + A +L +K+RG L G+ F+ +G GF+ Sbjct: 8 RQALMGVMAVALVAGMSAKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGEDGKLTGFE 67 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDF AL+ + K P +L +K+ID++ + +R+ Sbjct: 68 VDFAEALAKHLG---VKASLKPTKWDGMLASLDAKRIDVVINQVTISDVRKKKYDF--ST 122 Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G ++ K I + + L G + V GT ++ + H ++ Sbjct: 123 PYTVSGIQALVKKGNEGTIKTAADLQGKKVGVGLGT----NYEEWLRQHVQGVDIRTYDD 178 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R R DA D L AL L + D S+ A+ +G+ + Sbjct: 179 DPTKYQDLRVGRIDAILVDR--LAALDLVKKTKGTLAVTGDAFSRQESGVALRKGNEDLL 236 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSK 266 V A+ ++ G + + Sbjct: 237 KAVD---NAIAEMQKDGTLKALSEKWFG 261 >gi|291533533|emb|CBL06646.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [Megamonas hypermegale ART12/1] Length = 251 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 51/261 (19%), Positives = 89/261 (34%), Gaps = 21/261 (8%) Query: 12 LIILFFTSFSTNASILGDIKKRG--FLKCGINTGLVGFAEVKANG--DWKGFDVDFCRAL 67 + F ++S G L+ G N F NG +++GFD+D RA+ Sbjct: 3 AVSALFAGCGQDSS--DKAASSGEKVLRVGTNADFAPFEFQDENGSTEYQGFDMDLIRAV 60 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + + +N A++S IDI++ R+ + Y G Sbjct: 61 AKEMGYTA---EIQNVNFDGLIPAMESGNIDIIASGMTINEERKNQVEF--SAPYYISGL 115 Query: 128 GFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 ++ K I+ + L G I VQ GTT+ A + Sbjct: 116 TIVVPKDNTDINGFADLKGKKIAVQIGTTSMEEAQKIEGA-----EVKALNSSADTFMEL 170 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 +A DA D+ + ++ L D ++ A+ +G+TE V Sbjct: 171 KAGNVDAVINDLPVNDYYIVKTKA-TDVKRLDDKLTSEEYGFAMKKGNTELKQKVD---A 226 Query: 247 AMVTAEELGITQKNINQVSKD 267 A+ T +E G K + Sbjct: 227 ALKTLKENGEYDKIYEKWFGT 247 >gi|83646475|ref|YP_434910.1| cystine transporter subunit [Hahella chejuensis KCTC 2396] gi|83634518|gb|ABC30485.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Hahella chejuensis KCTC 2396] Length = 266 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 52/251 (20%), Positives = 87/251 (34%), Gaps = 16/251 (6%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 T +L I+KRG ++ G+ F NG GF+V+F +AL+ + K Sbjct: 25 TPSFAAEDLLQSIQKRGSIQVGLEGTYPPFNYQDENGQLTGFEVEFAKALADRLG---VK 81 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--K 135 +Y AL+S+++D++ + R+ G + K Sbjct: 82 AEYQTTKWDGLLAALESERLDVVINQVTISDARKKKYDF--SAPYTVSGIQALTRKDLES 139 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I+ S L+G + V GT E L + ++ R R DA Sbjct: 140 EINGPSDLAGMKVGVGLGTNYETWLRENSPQA----EVKTYDDDPTKYQDLRFGRIDAIL 195 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D A +L N + S+ A+ +G+ E + A+ E G Sbjct: 196 IDR--FAAFELLNKTGDALALSGAPFSRQEAGVALRKGNPELLAAID---QAIAKMREDG 250 Query: 256 ITQKNINQVSK 266 QK + K Sbjct: 251 TLQKLSEKWFK 261 >gi|227824559|ref|ZP_03989391.1| ABC polar amino acid transporter [Acidaminococcus sp. D21] gi|226905058|gb|EEH90976.1| ABC polar amino acid transporter [Acidaminococcus sp. D21] Length = 274 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 52/271 (19%), Positives = 93/271 (34%), Gaps = 20/271 (7%) Query: 1 MYKD-FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKG 58 M K V +L + +F K+ L+ G F + + + G Sbjct: 19 MKKRTVLVGMLAALTMFAAGCGGK----DAAKESKVLRAGTEPTFAPFEFQEKDSKDFTG 74 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD+D RA+ + D ++ + A+ S ID+++ T R+ ++ Sbjct: 75 FDMDLIRAIGKQMGRD---VEIKNMGFDALIPAINSGNIDVVASGMSITEERKKAVTF-- 129 Query: 119 RPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y G I+ + I S+ L G +I VQ GTT A A F Sbjct: 130 SDPYYTSGLAIIVRNDENNIKSLKDLEGKTISVQIGTTGADKAASVPGA-----KVKTFN 184 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E+ DA D LT + + I+ + + P A+ + D++ Sbjct: 185 TNAEVFLELNNKNADAVIIDRPVGAYF-LTKEGKGQDKIVGETMDAEPYGFAVKK-DSKL 242 Query: 238 YNIVSWTHYAMVTAEEL-GITQKNINQVSKD 267 ++ + E I +K + K+ Sbjct: 243 AGEINKALGELKKNGEYDKIYKKWFGEAPKE 273 >gi|169334519|ref|ZP_02861712.1| hypothetical protein ANASTE_00922 [Anaerofustis stercorihominis DSM 17244] gi|169259236|gb|EDS73202.1| hypothetical protein ANASTE_00922 [Anaerofustis stercorihominis DSM 17244] Length = 278 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 55/278 (19%), Positives = 106/278 (38%), Gaps = 21/278 (7%) Query: 1 MYK-DFFVSILCLIILFFTSFSTNASILGDI------KKRGFLKCGINTGLVGFAEVKAN 53 M K +I+ +L F+ S S + K L GI+ V N Sbjct: 1 MKKGKKIAAIVLTSVLGFSLLSGCGSK-DTVSAEAQFTKDKTLVVGIDNTYPPMEYVDKN 59 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G GFD++F +A+ + K++++ + F L + + D++ + R+ Sbjct: 60 GKTVGFDIEFAKAIGEKMG---RKVEFVNSSWDAIFAGLDADKYDLVISSVGVNKDRQEQ 116 Query: 114 LGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 L L+ Y Q I+ K G I SV +L+G + VQ TT+ T +Y+ + + + Sbjct: 117 LALSN---PYLANQQVIISSKSGKQIKSVEELAGKKVGVQVSTTSNDT-CNYYLSKGIDF 172 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 ++ + E A D D + + ++ V D ++ P+A A Sbjct: 173 DLREYDGMTEAFVALEGGSVDCVVTD--LVVGEYYVHKNTNKFVKTCDKLTNEPIAVAAK 230 Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 + + + ++ + + K + KD T Sbjct: 231 KSNQALIDKINPILEELSKDGTMTKISKKV--FGKDLT 266 >gi|325274871|ref|ZP_08140884.1| extracellular solute-binding protein [Pseudomonas sp. TJI-51] gi|324099988|gb|EGB97821.1| extracellular solute-binding protein [Pseudomonas sp. TJI-51] Length = 266 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 49/273 (17%), Positives = 101/273 (36%), Gaps = 17/273 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + +L + + A + D KRG L+ G++ + F G+ GF+ Sbjct: 1 MIKKYLSRLLVGVTALVAVTAAQAGAIDDAVKRGTLRVGMDPTYMPFQMTNKRGEIIGFE 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A++ ++ K + + AL + + D++ T R L L F Sbjct: 61 VDILKAMAKSMG---VKFEAVSTAYDGIIPALLTGKFDMIGSGMTLTQERN--LRLNFSE 115 Query: 121 ITYFDGQGFIMHK--KKGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVF 176 GQ ++ K I S L+ + + GTT E+ + Sbjct: 116 PFIVVGQTLLIRKELAGEIKSYKDLNNEKYRLTSKLGTTGEMVSKKLIGKAKY----HGY 171 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + +E + DA+ D + + + + L + + PLA + +GD Sbjct: 172 DNEQEAVMDVVNGKADAFVYDAP-YNVVAVDKAGAGKLLFLEEPFTYEPLAFGLKKGD-- 228 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 Y+ +++ + + + G + ++ K+ Sbjct: 229 -YDSINFINNFLHQIKHDGTYDRIHDKWFKNKD 260 >gi|330985963|gb|EGH84066.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. lachrymans str. M301315] Length = 266 Score = 143 bits (360), Expect = 6e-32, Method: Composition-based stats. Identities = 48/253 (18%), Positives = 90/253 (35%), Gaps = 11/253 (4%) Query: 11 CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSS 69 L L +S + + L I++R L G+ F + KG +V+ + Sbjct: 4 VLASLTVSSAALADATLDRIQERHRLVVGVLLSGGPFGSIDPQTRKPKGVNVELAEDIGK 63 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 + D ++ + + R LQ ++D+L N +WT R LG + Y G Sbjct: 64 RLGVD---VELVSVLTANRVQFLQQGKVDLLIANMEWTPERGQLLG-SVPTPFYRVGGTA 119 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 + K I+ L G +C G++ L ++ F+ E A R + Sbjct: 120 AVLKDSKITRWEDLKGQPVCTSQGSSYIKALTEF------GADIKAFKSSSESLLALRGN 173 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 C A D + + L ND ++ + ++ +P G+ + + Sbjct: 174 NCVAAVHDATLVNPLLAGNDEWKDYRAITPELNPAPSVIWTRSGEADTQKRLDSIVQEWH 233 Query: 250 TAEELGITQKNIN 262 + L +K N Sbjct: 234 RSGWLIELEKRYN 246 >gi|300717207|ref|YP_003742010.1| L-cystine ABC transporter, extracellular solute-binding protein [Erwinia billingiae Eb661] gi|299063043|emb|CAX60163.1| L-cystine ABC transporter, extracellular solute-binding protein [Erwinia billingiae Eb661] Length = 267 Score = 143 bits (360), Expect = 6e-32, Method: Composition-based stats. Identities = 54/266 (20%), Positives = 94/266 (35%), Gaps = 15/266 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 VS+ + +F+ + ++L +K+RG L G+ F+ NG GF+VDF A Sbjct: 15 VSLALVAGFSVNAFAADENLLSKVKERGSLLVGLEGTYPPFSFQDENGKLAGFEVDFADA 74 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + K P +L SK+ID++ + R+ G Sbjct: 75 LAQHLG---VKASLKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDF--STPYTISG 129 Query: 127 QGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 + K IS LSG + V G+ E L +A+ ++ Sbjct: 130 IQALTKKENAASISKPEDLSGKKVGVGLGSNYEQWL----RANVKGVDIRTYDDDPTKYQ 185 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 R R +A D L AL L + + S+ A+ +G+T+ + ++ Sbjct: 186 DLRVGRINAILVDR--LAALDLVKKTGNTLAVAGPAFSRQESGVALRKGNTQLLDAINKA 243 Query: 245 HYAMVTAEELGITQKNINQVSKDTTN 270 M + + D T Sbjct: 244 IADMQKDGTMAKLSE--KWFGADVTK 267 >gi|317406067|gb|EFV86331.1| extracellular solute-binding protein family 3 [Achromobacter xylosoxidans C54] Length = 286 Score = 142 bits (359), Expect = 6e-32, Method: Composition-based stats. Identities = 54/256 (21%), Positives = 91/256 (35%), Gaps = 20/256 (7%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + L +K+RG L G++ F + A G GF + R +++ + ++ +P+ Sbjct: 25 ATLDRVKQRGKLVVGVDGASPPFGLLDPATGKVGGFQTELGRDIATRLGVT---LETVPV 81 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 A R LQ+ ++D+L N WT R L A P G ++ K+ GI L Sbjct: 82 TAATRVQFLQAGKVDLLIANIQWTQERSEILSYAPTPYNLV-GGAAMVSKRSGIKRWEDL 140 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 G CV G+ L + + A + E A + CDA ALY Sbjct: 141 KGKVACVSQGSNFAKPLQETYGA-----VVKGLRNIPESLLALKGGSCDASVHIQPALYE 195 Query: 204 LKL---TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM-------VTAEE 253 + + PD + SP + + + V A+ Sbjct: 196 TLHGPNGKEWDGFELATPDQLIPSPTVIWTRRNEADTRAFVDGVIRDWHKSGLLVKEADR 255 Query: 254 LGITQKNINQVSKDTT 269 G+ + Q + D Sbjct: 256 FGVPADYLKQANADAQ 271 >gi|256832817|ref|YP_003161544.1| extracellular solute-binding protein family 3 [Jonesia denitrificans DSM 20603] gi|256686348|gb|ACV09241.1| extracellular solute-binding protein family 3 [Jonesia denitrificans DSM 20603] Length = 278 Score = 142 bits (359), Expect = 6e-32, Method: Composition-based stats. Identities = 41/235 (17%), Positives = 86/235 (36%), Gaps = 10/235 (4%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L GI G ++ GFDVD R ++ + ++++ + R L+ Sbjct: 36 TLTIGIKFDQPGLGFKDGE-EYTGFDVDVARYVADKLGYAEEDVEFVEAISANRETMLEG 94 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAG 153 Q+D++ T R+ + A + GQ ++ I+ L G ++C +G Sbjct: 95 DQVDMIFATYSITEERDEVVDFA--GPYFVAGQDLLVRADETDITGPDTLEGKNLCSVSG 152 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 +T+ + D + + + E + + + DA T D L L + Sbjct: 153 STSAQRVKDTYD-QGTGINLVEQPGYSECLSLLTSGQVDAVTTDDIILAGLAAE-EGSGA 210 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 ++ + S+ I +G + ++ M E G Q+ ++ + T Sbjct: 211 MKVVGNPFSEERYGVGIPEGSDQ-CQAINDALTDMF---EDGSWQEALDAATTGT 261 >gi|116254187|ref|YP_770025.1| solute-binding component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115258835|emb|CAK09941.1| putative solute-binding component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 265 Score = 142 bits (359), Expect = 6e-32, Method: Composition-based stats. Identities = 50/274 (18%), Positives = 103/274 (37%), Gaps = 18/274 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + K + + + + + + A L DIK G + GI + F+ A+ KG+D Sbjct: 4 LMKLRYTATAAIAVFGILAGAAQADELADIKAAGEINIGIFSDFPPFSSASADMSIKGYD 63 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + ++ + K+ + + + R L ++D+L + ++ R + A Sbjct: 64 VDVAQKIADGLG---VKLNLVSVTGQNRIAYLNDDRVDLLM-SVGYSKERAEVIDFAAPY 119 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+ I +S L+ S+ V GT + +L FE Sbjct: 120 APYY--IAVIGPAALKVSGKEDLADKSVAVNRGTLEDTSLTAVAPGSAA---IQRFENYN 174 Query: 181 EIDAAYRAHRCDAYT--GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + A+ + + D+ A + +P + + SP A+ +G+ Sbjct: 175 SVIQAFISGQTQLMVVGNDVGAQVLARQDELKPEQ----KFQLLSSPSHIALRKGEEGLK 230 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272 +V+ + AM++ L + K+ K NP+ Sbjct: 231 KVVNDSVAAMISNGSLDASSKS---WLKTPLNPE 261 >gi|194468162|ref|ZP_03074148.1| extracellular solute-binding protein family 3 [Lactobacillus reuteri 100-23] gi|194453015|gb|EDX41913.1| extracellular solute-binding protein family 3 [Lactobacillus reuteri 100-23] Length = 294 Score = 142 bits (359), Expect = 6e-32, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 98/254 (38%), Gaps = 12/254 (4%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + + IKKRG L G++ V K NG G+DVD RA++ + K + Sbjct: 34 ANHTDTWERIKKRGTLLIGVDDTFVPMDFRKKNGQLVGYDVDLSRAVAKVLG---LKADF 90 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 ++ + L++ ID + T R+ + + + GQ ++ K I + Sbjct: 91 QSIDWSMKETELKNGTIDCIWNGYTATPSRQKRIAFSR--VYELSGQSLVVRKDSKIKNF 148 Query: 141 SQLSGASICVQAGTTTELTLADY---FKAHNMKYHPIVFERVEEIDAAYRAHRCD-AYTG 196 + + G ++ +Q +T + Y K PI+++ +A R G Sbjct: 149 ADMKGKTLGIQESSTAQTDFDKYPQVLKRLVKGQKPILYQDNSSAFMDLQAGRTQGVLAG 208 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 + A Y + + +I +A + +GD +++ +YA+ ++ G Sbjct: 209 TVYAGYYATHIANSNNYKLISATKYPADRVAIGMRKGD---RTLINKINYALGILQKDGT 265 Query: 257 TQKNINQVSKDTTN 270 ++ + ++ Sbjct: 266 LRQINKKWLGIDSD 279 >gi|213647483|ref|ZP_03377536.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 201 Score = 142 bits (359), Expect = 6e-32, Method: Composition-based stats. Identities = 32/176 (18%), Positives = 63/176 (35%), Gaps = 11/176 (6%) Query: 3 KDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 + ++L + + + + S L I K G + G V F+ Sbjct: 4 RKLTTAMLVMGLSAGLAHAEDGAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVV 63 Query: 58 GFDVDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ D+ A+ + +K ++ +P+ ++ R LQ+ D +T L R+ Sbjct: 64 GYSQDYSNAIVEVVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQ 123 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 + G + K I L G ++ V +GTT+E+ L + Sbjct: 124 AAF--SDTIFVVGTRLLTKKGGDIKDFPDLKGKAVVVTSGTTSEILLHKLNEEQKR 177 >gi|241762904|ref|ZP_04760967.1| extracellular solute-binding protein family 3 [Acidovorax delafieldii 2AN] gi|241368079|gb|EER62284.1| extracellular solute-binding protein family 3 [Acidovorax delafieldii 2AN] Length = 278 Score = 142 bits (359), Expect = 6e-32, Method: Composition-based stats. Identities = 51/256 (19%), Positives = 99/256 (38%), Gaps = 12/256 (4%) Query: 22 TNAS-ILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 +A L IK+RG + G+ F + AN G++ + RA++ + + + Sbjct: 25 AHADATLDKIKQRGKVTIGVLVNGGPFGSIDPANQQLVGWNPELARAVAKGLGAEA---E 81 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 + + R LQ+ ++D+L + + R +LG A P G + K GIS Sbjct: 82 LVQVQTATRVQFLQAGKVDLLIASMELNPDRAETLGYAPTPFYRVGGTA-AVRKDSGISK 140 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L G +C+ G++ L A++ F+ + A + C A D + Sbjct: 141 WDDLRGKPVCISQGSSFAKPL-----ANDYGAQVQGFKSSSDSLLALKGGTCVAAVHDST 195 Query: 200 ALYALKLTNDRPSEH-VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 ++ L +N S++ + I +P +G+ + V L T+ Sbjct: 196 LIHPLLRSNPEWSQYSAPIATEILPAPSVVWTRKGEADTIAAVDKVVQDWHRTGWLIATE 255 Query: 259 KNINQVSKDTTNPDVQ 274 K + + P++Q Sbjct: 256 KRVGIEPPNPLLPELQ 271 >gi|134298638|ref|YP_001112134.1| extracellular solute-binding protein [Desulfotomaculum reducens MI-1] gi|134051338|gb|ABO49309.1| amino acid ABC transporter substrate-binding protein, PAAT family [Desulfotomaculum reducens MI-1] Length = 264 Score = 142 bits (359), Expect = 6e-32, Method: Composition-based stats. Identities = 51/274 (18%), Positives = 100/274 (36%), Gaps = 21/274 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKK------RGFLKCGINTGLVGFAEVKANG 54 M + F + L IL + + + K + L + F ++G Sbjct: 1 MKRIFKTVLTGLTILALALVAVGCTGKEEAKSPAQDTGKKKLVAAADATFAPFEFTDSSG 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + GFD+D A++ + + +++ + ALQS QID T T+ E S Sbjct: 61 KYVGFDLDLIAAIAEEMGYE---LEFQSIAFDGIIPALQSSQID--CAATAMTITPERSK 115 Query: 115 GLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F Y GQ ++ + I V+ L G +I VQ+GTT + K Sbjct: 116 AVNFSDPYYKAGQIVVVKTENNDIKGVNDLKGKTIAVQSGTTGAMEAE----KATDKKKV 171 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I F ++ + +A D ++ + ++ DI+S A+ + Sbjct: 172 IYFTGADQALQELKNGAANAVIIDYPVAAYFIQQGNK--DVKLVGDIMSAEEYGIAVPKD 229 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 + I++ + + +E G + + + Sbjct: 230 KEQ---ILADVNAGLKKIKENGKYAEIYKKWFGE 260 >gi|296157669|ref|ZP_06840503.1| extracellular solute-binding protein family 3 [Burkholderia sp. Ch1-1] gi|295891915|gb|EFG71699.1| extracellular solute-binding protein family 3 [Burkholderia sp. Ch1-1] Length = 264 Score = 142 bits (359), Expect = 6e-32, Method: Composition-based stats. Identities = 57/273 (20%), Positives = 104/273 (38%), Gaps = 21/273 (7%) Query: 3 KDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K V+ LI FT+ + +A +L +K+RG L+ G+ F +G+ G+DV Sbjct: 7 KKILVA--GLIGASFTAVTAHADDLLDQVKQRGTLRIGLEGTFPPFNSKAPSGELVGYDV 64 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D +A+++ + P +++ LQ+ + D++ T R+ +L P Sbjct: 65 DIAKAVAAKLGVKP---EFVTTEWSGIIAGLQAGKFDVIVNQVGITDARKQALDF--SPA 119 Query: 122 TYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + I K S+ L G + V G T + +A ++K +P Sbjct: 120 YTYSAAQLIQRKDDTRQFKSLEDLKGKKLGVGLG-TNYMDMAKSVPGIDVKTYPGA---- 174 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A R DA D L L + P ++ + +P +G+ ++ Sbjct: 175 PEYLRDLAAGRLDAALNDRLMLAYLMKNSQLP--LRTGANVGAGNPSGIPFKKGNPKFAK 232 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSK-DTTNP 271 + AM E G K ++ D + P Sbjct: 233 AIDD---AMTQLEADGTLSKISDKWFGIDVSKP 262 >gi|46578802|ref|YP_009610.1| amino acid ABC transporter periplasmic amino acid-binding protein [Desulfovibrio vulgaris str. Hildenborough] gi|120603591|ref|YP_967991.1| extracellular solute-binding protein [Desulfovibrio vulgaris DP4] gi|46448214|gb|AAS94869.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Desulfovibrio vulgaris str. Hildenborough] gi|120563820|gb|ABM29564.1| amino acid ABC transporter substrate-binding protein, PAAT family [Desulfovibrio vulgaris DP4] gi|311232665|gb|ADP85519.1| extracellular solute-binding protein family 3 [Desulfovibrio vulgaris RCH1] Length = 249 Score = 142 bits (359), Expect = 6e-32, Method: Composition-based stats. Identities = 47/243 (19%), Positives = 87/243 (35%), Gaps = 18/243 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + F +++ ++L F S + ++ ++ GI+ FA V +G GFD Sbjct: 1 MKRSFVYTVVMALVLAFASVAAAE-------EKTYIN-GIDANYPPFAYVDKDGKPAGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +++ + K+ + P++ +L +K+ID++ T R+ + + Sbjct: 53 VDSMNWIAAKMGF---KVVHKPMDWDGIVPSLLAKKIDMVCSGMSITDARKKQITFSE-- 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSG-ASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Q F+ K +S G + VQ GT+ L + ++ Sbjct: 108 PYWTVSQVFVAKKDSKLSVDDVYKGKKKLGVQRGTSEADALQKQAPEKGWNFELRFYDSA 167 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 R DA D L A +P IL A DTE Sbjct: 168 PLAIEDVLNGRIDAAGMD--ILPAEDAAAKKP--VKILGTFGEPEDFGVATRNEDTELRG 223 Query: 240 IVS 242 ++ Sbjct: 224 KIN 226 >gi|313900555|ref|ZP_07834048.1| ABC transporter, substrate-binding protein, family 3 [Clostridium sp. HGF2] gi|312954617|gb|EFR36292.1| ABC transporter, substrate-binding protein, family 3 [Clostridium sp. HGF2] Length = 272 Score = 142 bits (359), Expect = 6e-32, Method: Composition-based stats. Identities = 47/234 (20%), Positives = 86/234 (36%), Gaps = 11/234 (4%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L GI+ K +G GFDV+ A+S I K+++ ++ + L+S Sbjct: 48 VLTIGIDDTFAPMGF-KKDGKLVGFDVELAEAVSKKIGK---KVEFQNIDWDLKETELES 103 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 ID++ T R+ + + Q I K GI + + + ++ VQ + Sbjct: 104 GNIDLIWNGYSITEERKKQVLF--SDPYMENRQIIITTDKTGIKTKADIKDKTLSVQKNS 161 Query: 155 TT-ELTLADY-FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 + + + D F A P F+ + + R DA D + D Sbjct: 162 SAYDAVMKDKDFVAGLKDGKPTQFDTNNDCFMDLESGRSDAIVVDETLARYYMKQQDNGV 221 Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 +V+L + K A + + DTE ++ AM ++ G + K Sbjct: 222 NYVVLDENFGKEEYAIGMRKDDTELCKHIN---KAMQELKDDGTFDNIKDTWFK 272 >gi|330859510|emb|CBX69853.1| cystine-binding periplasmic protein [Yersinia enterocolitica W22703] Length = 266 Score = 142 bits (359), Expect = 7e-32, Method: Composition-based stats. Identities = 46/264 (17%), Positives = 84/264 (31%), Gaps = 15/264 (5%) Query: 2 YKDFFVSILCLIILFFTSFS--TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + + ++ + + + +L +K+RG L G+ F+ +G GF Sbjct: 7 RRRVVLGMMAVALATGLNVKSYAAGDLLDQVKERGTLIVGLEGTYPPFSFQGEDGKLTGF 66 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 +VDF AL+ + K + P +L+SK+ID+ + R+ Sbjct: 67 EVDFANALAEHMG---VKAKITPTKWDGMLASLESKRIDVAINQVTISDERKKKYDF--S 121 Query: 120 PITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 G + K S L G + V G+ E L + K ++ Sbjct: 122 TPYTVSGIQVLTKKGNEGKFSKPEDLVGKKVGVGLGSNYEQWLRENLK----GVDIRTYD 177 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 R R DA D L AL L + ++ A+ + + E Sbjct: 178 DDPTKYQDLRVGRTDAILVDR--LAALDLVKKTNDTLTVAGPAFARQESGVALRKNNPEL 235 Query: 238 YNIVSWTHYAMVTAEELGITQKNI 261 ++ M L + Sbjct: 236 LAAINQAIAEMQKDGTLAKISEKY 259 >gi|325126022|gb|ADY85352.1| Glutamine ABC transporter solute-binding component [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 227 Score = 142 bits (359), Expect = 7e-32, Method: Composition-based stats. Identities = 40/226 (17%), Positives = 77/226 (34%), Gaps = 14/226 (6%) Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G +GF++D A++ I SK + P+ K R L + +D + T R Sbjct: 5 KTGKIEGFEIDLATAITKQILGPKSKAVFRPITEKTRITLLHNGSLDAVISTMTITKERM 64 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV--QAGTTTELTLADYFKAHNM 169 + + + + I+ K I S++ L+ + V GT +A+ Sbjct: 65 KVIDF--SDVYFNANESMIVKKSSKIRSIADLNKKGVVVIAIKGT----DVANQVAKLAS 118 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 K F+ A +A + D D L L E + +++ P Sbjct: 119 KASVKQFDDYGSAFNALKAGQGDVMIDDNGILAGLIADTP---EFTLTKASLAEEPYGIG 175 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 + +G TE ++ G + + + + DV+ Sbjct: 176 VEKGQTEMRQAINQALK---QLRANGKYDQLVKKWFGKVSGFDVKH 218 >gi|297559648|ref|YP_003678622.1| extracellular solute-binding protein family 3 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296844096|gb|ADH66116.1| extracellular solute-binding protein family 3 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 283 Score = 142 bits (359), Expect = 7e-32, Method: Composition-based stats. Identities = 36/219 (16%), Positives = 71/219 (32%), Gaps = 9/219 (4%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 + G+ G + + GFDVD ++ + +P +I++ + R LQ Sbjct: 45 TITIGVKYDQPGLGLLDGD-APVGFDVDVATYIAGELGYEPEQIEWTEAASANRESFLQQ 103 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAG 153 +D++ T R + A Y Q ++ + I L+G +C +G Sbjct: 104 GTVDMVIATYSITDERRQVVDFA--GPYYVAQQDILVQADNEDIQGPEDLAGKVLCSASG 161 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 + + + D + E + DA T D + L P Sbjct: 162 SRSANNIVDDM---GIDAELREAGNYSECLSLLGNGTVDAVTTDNTILAGFAAQ--DPGT 216 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 + ++ + + + G TE V+ M Sbjct: 217 YRVVNNPFGEERYGVGLPAGSTERCEEVNAAIQKMWDEG 255 >gi|291166920|gb|EFE28966.1| amino acid ABC transporter, amino acid-binding protein [Filifactor alocis ATCC 35896] Length = 260 Score = 142 bits (359), Expect = 7e-32, Method: Composition-based stats. Identities = 45/246 (18%), Positives = 87/246 (35%), Gaps = 12/246 (4%) Query: 1 MYKD----FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M + F V IL L L S + + G++ ++G+ Sbjct: 1 MKQKNIVLFLVGILFLFSLCSCSNKQPSQGNNS--ETSNYVIGLDDTFAPMGFRDSSGEL 58 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFD+D + ++ + + ++ + L +K ID++ + R+ + Sbjct: 59 VGFDIDLAKEIARR---KNFTVTFQSIDWAMKENELNAKNIDMIWNGYSISEERKQKVAF 115 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 D Q I K I+++ L G I +QA +T + + + Sbjct: 116 --STPYVEDKQLVITMKDSPITTIEDLKGKVISLQAESTAIDAVNQNPTISTSLAKIVEY 173 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E+ + RCDA D L + + E IL + ++ +A I + DTE Sbjct: 174 PSNNEVFQDLQTGRCDAIVVDE-ILARYYMKQNASQEFRILEEALATEYMAVGIRKEDTE 232 Query: 237 WYNIVS 242 ++ Sbjct: 233 LLQAIN 238 >gi|315647912|ref|ZP_07901013.1| extracellular solute-binding protein family 3 [Paenibacillus vortex V453] gi|315276558|gb|EFU39901.1| extracellular solute-binding protein family 3 [Paenibacillus vortex V453] Length = 255 Score = 142 bits (359), Expect = 7e-32, Method: Composition-based stats. Identities = 51/282 (18%), Positives = 105/282 (37%), Gaps = 31/282 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K S+L +L T ++S G L GI+ + + GFD Sbjct: 1 MKK--IASVLAGFMLLLTVVGCSSSSGGG----NELVVGIDDKFAPMGFRDESNEIVGFD 54 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D+ RA + + + +++ P++ K + L S +ID++ T R+ + Sbjct: 55 IDYARAAAEKMGKE---VKFQPIDWKAKESELSSGRIDLIWNGYTITDERKEKVLF--TK 109 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Q + ISS+ L+G I +Q+ ++ L+ + H F Sbjct: 110 PYLENSQVVAVLSDSAISSIQDLAGKQIGLQSLSSAADALSAN-EIHAQVEKISEFPDNV 168 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + + R DA D + + + IL + ++ + +G+ E Sbjct: 169 LALSDLKNGRVDAVVIDEVVMKYYMSKEE--GTYKILEESLAPEQYGIGVKKGNEELLES 226 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDV-QRFLGIDK 281 + QK +++++ D T + +++ G DK Sbjct: 227 L----------------QKALDEMNADGTAAKISEKWFGEDK 252 >gi|16330280|ref|NP_441008.1| hypothetical protein sll1762 [Synechocystis sp. PCC 6803] gi|1652769|dbj|BAA17688.1| sll1762 [Synechocystis sp. PCC 6803] Length = 382 Score = 142 bits (359), Expect = 7e-32, Method: Composition-based stats. Identities = 41/250 (16%), Positives = 90/250 (36%), Gaps = 12/250 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K F + + L++ + + A + I + G L G N V F+ + N + G+ Sbjct: 84 MLKQFSATFIGLLLATVGAQAAIAETVMEKIIRTGNLTIGANLDNVPFSYINDNNEVVGY 143 Query: 60 DVDFCRALSSAIFDDPSK---IQYLPL-NAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +D + + + + +Q + + + + L++ ++DI+ +T R+ + Sbjct: 144 SIDIADRIREEVGKELGRDVVLQIVEVQDMSDALPKLKTGELDIVCDTA-FTWERDRYVD 202 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 G ++ I+S L G + + T + D K + + Sbjct: 203 FTVS--YAVAGIQLLVPNDTPINSRETLMGRRVAMVPNT----IVEDAVKIVQNEIEVVP 256 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 V A + DA GD L L+ D P VI ++ + + + + Sbjct: 257 VTSVRAGMEALKKGTVDAVAGDGIQLAGLRQVLDMPDTKVIPQPAETRYGVGCMVREDNP 316 Query: 236 EWYNIVSWTH 245 + + + Sbjct: 317 GFLRLANRAL 326 >gi|303257202|ref|ZP_07343216.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderiales bacterium 1_1_47] gi|331000693|ref|ZP_08324344.1| glutamine ABC transporter periplasmic protein [Parasutterella excrementihominis YIT 11859] gi|302860693|gb|EFL83770.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderiales bacterium 1_1_47] gi|329570608|gb|EGG52326.1| glutamine ABC transporter periplasmic protein [Parasutterella excrementihominis YIT 11859] Length = 253 Score = 142 bits (358), Expect = 8e-32, Method: Composition-based stats. Identities = 47/271 (17%), Positives = 92/271 (33%), Gaps = 24/271 (8%) Query: 1 MYKDFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKG 58 M++ ++ LC + + S S + + D G L G ++ F + +G + G Sbjct: 1 MFRRNLLAFLCALSMLPVSASFAKSPTIED----GVLLVGTDSSFAPFEFLAEDGKNFTG 56 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD+D RA+ + K+ + AL++ +D + R+ + Sbjct: 57 FDMDLIRAIGKELGY---KVVVQNMGFDATVPALRTGIVDAVIAGMTINEKRKKFVDF-- 111 Query: 119 RPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN-MKYHPIVF 176 Y G ++ S+ L G I Q GTT F+A + F Sbjct: 112 SDPYYTSGLIIMVPSSDTTTKSIKDLEGKKIGAQVGTTG------MFRAEKVPGAKVVTF 165 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E ++ DA D + V + A+ +G+ E Sbjct: 166 ANAAETFLEFQNGGVDAVIQDFPVVAYYVAQGGNKGRLVGPK--MEAEEYGIAVTKGNKE 223 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 V+ + A+ + ++ G Q+ + + Sbjct: 224 L---VAQINKALASLKKSGEFQRIYKKWFGE 251 >gi|327534390|gb|AEA93224.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis OG1RF] Length = 277 Score = 142 bits (358), Expect = 8e-32, Method: Composition-based stats. Identities = 53/279 (18%), Positives = 98/279 (35%), Gaps = 17/279 (6%) Query: 1 MYKDFFVSIL--CLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + +++L C +L F +N I + + G++ V +G Sbjct: 2 MKKKYSLALLVICCSLLLFAGCGKRKSNEDQWTRINEEKRIIIGLDDSFVPMGFQDKSGK 61 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFDVD +A+ + + P++ + LQ++ ID++ T R + Sbjct: 62 IVGFDVDLAKAVFKLYGIS---VDFQPIDWSMKETELQNQTIDLIWNGYTKTSERAEKVQ 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYH 172 + Q + K+K I++ S + G + VQ G++ D K Sbjct: 119 FTQ--PYMTNDQVLVSLKEKNIATASAMQGKILGVQNGSSGYDGFESQPDVLKKFVKDQT 176 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 PI+++ E ++ R D D D + I A + + Sbjct: 177 PILYDGFNEAFLDLKSGRIDGLLIDRVYANYYLSHEDNLKNYTISHVGYDNEDFAVGVRK 236 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQK-NINQVSKDTTN 270 D + V + A T + G K + +D TN Sbjct: 237 SDNQL---VQKINTAFETLRKDGTLSKISQKWFGEDVTN 272 >gi|307154138|ref|YP_003889522.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7822] gi|306984366|gb|ADN16247.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7822] Length = 297 Score = 142 bits (358), Expect = 8e-32, Method: Composition-based stats. Identities = 44/243 (18%), Positives = 86/243 (35%), Gaps = 13/243 (5%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FD 73 F + ++L I++ G L G + F G+W G+ VD + + + F+ Sbjct: 40 FPAQVDAETVLEKIQRTGELNAGARIDAIPFGYKTDKGEWTGYSVDLLKLIQQDLEKKFN 99 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH- 132 P K+ + RF A++ ++++I+ T T R + + + G F++ Sbjct: 100 KPIKLNLKEVTIDSRFQAIEKQEVEIVCGATTVTQQRLEKVDFSL--PFFMTGSQFLVKL 157 Query: 133 -KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191 L SI TTT+ + + + EE + Sbjct: 158 EDAANFDINGTLKDVSIAYIPHTTTDEIIRQIYPFARWQ----PVRNREEGVKKLKQGAV 213 Query: 192 DAYTGDISALYALKLTNDR-PSEHVILPD-IISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 A D L + P + I+P+ ++ A + + + EW V T + Sbjct: 214 TAVVSDGILLVGEIVRQGNEPRDFEIMPNVPMTTELYACILPKNNPEWQEFVDQTISSQN 273 Query: 250 TAE 252 A+ Sbjct: 274 NAQ 276 >gi|317048576|ref|YP_004116224.1| family 3 extracellular solute-binding protein [Pantoea sp. At-9b] gi|316950193|gb|ADU69668.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b] Length = 266 Score = 142 bits (358), Expect = 8e-32, Method: Composition-based stats. Identities = 55/261 (21%), Positives = 93/261 (35%), Gaps = 14/261 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V + L+ F ++L +K+RG L G+ F+ NG GF+V+F + Sbjct: 14 VMAVALVAGFNVKTFAAENLLNKVKERGTLLVGLEGTYPPFSFQDENGKLTGFEVEFAQE 73 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + K P +L SK+ID++ + R+ + P T Sbjct: 74 LAQHLG---VKASLKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDFS-TPYTISGV 129 Query: 127 QGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 Q + K G I+ LSG + V G+ E L D K ++ Sbjct: 130 QALTLKKNAGSINKPEDLSGKKVGVGLGSNYEQWLRDNVK----GVDIRTYDDDPTKYQD 185 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 R+ R DA D L AL L + S+ A+ +G+ + + Sbjct: 186 LRSGRLDAILVDR--LAALDLVKKTGDTMAVAGPAFSRLESGVALRKGNDDLLKAID--- 240 Query: 246 YAMVTAEELGITQKNINQVSK 266 A+ ++ G K + Sbjct: 241 AAIADMQKDGSLSKLSEKWFG 261 >gi|325517962|gb|EGC97786.1| polar amino acid transporter substrate-binding protein [Burkholderia sp. TJI49] Length = 264 Score = 142 bits (358), Expect = 8e-32, Method: Composition-based stats. Identities = 56/277 (20%), Positives = 101/277 (36%), Gaps = 21/277 (7%) Query: 1 MYKDFFVSILCLIILFFT---SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M +L ++ + + + A +L +K+RG L+ G+ F G+ Sbjct: 1 MKFSLLKKLLVAGLIGTSFAAATAHAADLLDQVKQRGTLRIGLEGTFPPFNSKNPQGELV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD +A+++ + P +++ LQ+ + D++ T R+ +L Sbjct: 61 GFDVDIAKAIAAKLGVKP---EFVTTEWSGIIAGLQAGKFDVIVNQVGITDARKQTLDF- 116 Query: 118 FRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 P + I K S+ L G + V G T + +A ++K +P Sbjct: 117 -SPAYTYSTAQLIQRKDDTRQFKSLEDLKGKKLGVALG-TNYMDMAKSVPGIDVKTYPGA 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 E A R DA D L L + P ++ S +P +G+ Sbjct: 175 ----PEYLRDLAAGRLDAALNDRLMLAYLTKNSQLP--LRPGANVGSANPSGIPFKKGNP 228 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSK-DTTNP 271 ++ + AM E G K ++ D T P Sbjct: 229 QFQKAIDD---AMTQLEADGTFTKISDKWFGIDVTKP 262 >gi|300693530|ref|YP_003749503.1| high affinity periplasmic solute-binding protein; high affinity transport system [Ralstonia solanacearum PSI07] gi|299075567|emb|CBJ34860.1| high affinity periplasmic solute-binding protein; high affinity transport system [Ralstonia solanacearum PSI07] Length = 277 Score = 142 bits (358), Expect = 8e-32, Method: Composition-based stats. Identities = 50/236 (21%), Positives = 87/236 (36%), Gaps = 12/236 (5%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 L I +R L G+ F + A GF+VD +AL + + ++ + + Sbjct: 29 TLDKIHQRHKLVVGVVLSGGPFGSIDPATQRAVGFNVDLAQALGRGLGVE---VETVQVQ 85 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF-IMHKKKGISSVSQL 143 R LQ ++DIL + + R + LA P Y+ G ++ K + S L Sbjct: 86 PSNRIPFLQQGRVDILVASMELNPER--AGLLAHVPTPYYRVGGVALVPKDSPVRRWSDL 143 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 G +C+ G++ LA A P F+ E A R C A D + L Sbjct: 144 KGKEVCLSQGSSYAKPLAAEIGA-----TPKGFKSPAESLLALRGSNCAAAVHDATLLQP 198 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L N ++ ++ + +P +G+ + + L T+K Sbjct: 199 LPRANPEWKDYRVVGPDLIPAPTVIWARKGERDTVAALDRIVQGWHRDGWLIETEK 254 >gi|28870091|ref|NP_792710.1| glutamine ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213966881|ref|ZP_03395031.1| glutamine ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato T1] gi|301381564|ref|ZP_07229982.1| glutamine ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato Max13] gi|302061680|ref|ZP_07253221.1| glutamine ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato K40] gi|302131523|ref|ZP_07257513.1| glutamine ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28853337|gb|AAO56405.1| glutamine ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213928203|gb|EEB61748.1| glutamine ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato T1] gi|330877719|gb|EGH11868.1| glutamine ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330965183|gb|EGH65443.1| glutamine ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 277 Score = 142 bits (358), Expect = 8e-32, Method: Composition-based stats. Identities = 42/240 (17%), Positives = 88/240 (36%), Gaps = 13/240 (5%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQY 80 +A L D+ + L CG+ + F+ + G DVD C+AL+ + + ++ Sbjct: 20 AHADQLSDVMSKKSLSCGVYADVPPFSAPDPKTRELVGMDVDLCKALAKHMGVE---LEL 76 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 PL+ + R ++ ++D++ N +T R + Y + ++ Sbjct: 77 KPLSVEARIPEVKMGRVDVIFANLAYTRSRADQIQF--SDPYYIAKETLVVRAANADQPK 134 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 S I G+T+E ++ P+ F+ A + ++ + Sbjct: 135 SFFKDKRISSTKGSTSEQSIR------LADATPVTFQDTGSAYMALQQNKVVGLVTNTMT 188 Query: 201 LYALKLTNDRPS-EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L E I + ++ P+ + QG+ + V+ + YAM A E+ Sbjct: 189 AIKLVGQAKASGVELAIAKEPMALEPIGAGMRQGEPAFLAKVNESLYAMEAAGEIDAIWA 248 >gi|238794027|ref|ZP_04637645.1| Cystine-binding periplasmic protein [Yersinia intermedia ATCC 29909] gi|238726659|gb|EEQ18195.1| Cystine-binding periplasmic protein [Yersinia intermedia ATCC 29909] Length = 262 Score = 142 bits (358), Expect = 9e-32, Method: Composition-based stats. Identities = 46/264 (17%), Positives = 83/264 (31%), Gaps = 15/264 (5%) Query: 2 YKDFFVSILCLIILFFTSFS--TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + + ++ + + + +L +K RG L G+ F+ +G GF Sbjct: 3 RRRVVLGMVAVALATGLNVKSYAAGDLLSQVKDRGTLIVGLEGTYPPFSFQGEDGKLTGF 62 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 +VDF AL+ + K + P +L+SK+ID+ + R+ Sbjct: 63 EVDFANALAEHMG---VKAKITPTKWDGMLASLESKRIDVAINQVTISEERKKKYDF--S 117 Query: 120 PITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 G + K + L G + V G+ E L D K ++ Sbjct: 118 TPYTISGIQVLTKKGNEGNFTKPEDLEGKKVGVGLGSNYEQWLRDNLK----GVDIRTYD 173 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 R R DA D L AL L + ++ A+ + + E Sbjct: 174 DDPTKYQDLRVGRTDAILVDR--LAALDLVKKTGGTLAVAGSAFARQESGVALRKNNPEL 231 Query: 238 YNIVSWTHYAMVTAEELGITQKNI 261 ++ M L + Sbjct: 232 LAAINQAITEMQKDGTLAKISEKY 255 >gi|218514470|ref|ZP_03511310.1| probable amino acid ABC transporter, substrate-binding protein [Rhizobium etli 8C-3] Length = 217 Score = 142 bits (358), Expect = 9e-32, Method: Composition-based stats. Identities = 44/220 (20%), Positives = 81/220 (36%), Gaps = 14/220 (6%) Query: 2 YKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWK-GF 59 +K ++ + I + A L IK RG L G+ F + + G+ Sbjct: 3 HKILPKALFAMSISLLAATQAFADATLDRIKARGALTVGVILSGAPFGYIDPTSQTQKGY 62 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 ++D +AL+ + K++ + + R LQ ++DIL N +T + + L + Sbjct: 63 NLDIAKALADDLG---VKLETVTVTPPNRVQFLQQGKVDILIANMQYTE--DRAKVLDWV 117 Query: 120 PITYFDGQGFIM-HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 P Y G + K G+ + L G +CV G+ L + + A Sbjct: 118 PTPYDRSGGAAVGRKDSGLKDWADLKGKPVCVSQGSNYTQPLIEQYGA-----EVKGLPS 172 Query: 179 VEEIDAAYRAHRCDAYTGDISAL-YALKLTNDRPSEHVIL 217 E A + C + L L+ + ++ IL Sbjct: 173 QPESLLALQGGNCVVAVHVGATLGLLLQDRPEDWKDYAIL 212 >gi|295836167|ref|ZP_06823100.1| glutamate-binding protein [Streptomyces sp. SPB74] gi|197695263|gb|EDY42196.1| glutamate-binding protein [Streptomyces sp. SPB74] Length = 280 Score = 142 bits (358), Expect = 9e-32, Method: Composition-based stats. Identities = 42/250 (16%), Positives = 87/250 (34%), Gaps = 13/250 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGF------LKCGINTGLVGFAEVKANGDWKGFD 60 VS ++L ++ D K G + GI G + +G + GFD Sbjct: 6 VSAAVAVVLTVGLAASACGKNDDDKASGGSGGGKKITIGIKFDQPGLGQKLPSGKFAGFD 65 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD ++ A+ ++I + + +R L+ +D ++ + T RE + A Sbjct: 66 VDVATYVAKALGYKTNQIVWKEAKSADRETMLERGDVDFIAASYSITDEREAKVDFA--G 123 Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Q ++ + K I+ L+ +C G+T+ + K + + Sbjct: 124 PYLLAHQDVLVREDEKEINDPKDLNSRKLCSVTGSTSAQNIK---KDLAPRADLQEYGGY 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E DA T D S L + + + ++ + +G ++ + Sbjct: 181 SECLTGLENKAVDALTTDDSILAGYAAQKEFQGKFKLAGFKMTNENYGIGVKKG-SDLKD 239 Query: 240 IVSWTHYAMV 249 ++ MV Sbjct: 240 KINDALKKMV 249 >gi|148543614|ref|YP_001270984.1| extracellular solute-binding protein [Lactobacillus reuteri DSM 20016] gi|184153022|ref|YP_001841363.1| amino acid ABC transporter substrate binding component [Lactobacillus reuteri JCM 1112] gi|227363423|ref|ZP_03847547.1| hypothetical protein HMPREF0535_0385 [Lactobacillus reuteri MM2-3] gi|325681968|ref|ZP_08161486.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri MM4-1A] gi|148530648|gb|ABQ82647.1| amino acid ABC transporter substrate-binding protein, PAAT family [Lactobacillus reuteri DSM 20016] gi|183224366|dbj|BAG24883.1| amino acid ABC transporter substrate binding component [Lactobacillus reuteri JCM 1112] gi|227071523|gb|EEI09822.1| hypothetical protein HMPREF0535_0385 [Lactobacillus reuteri MM2-3] gi|324978612|gb|EGC15561.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri MM4-1A] Length = 294 Score = 142 bits (358), Expect = 9e-32, Method: Composition-based stats. Identities = 47/254 (18%), Positives = 96/254 (37%), Gaps = 12/254 (4%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + + IKKRG L G++ V K NG G+DVD RA++ + K + Sbjct: 34 ANHTDTWERIKKRGTLLIGVDDTFVPMDFRKKNGQLVGYDVDLSRAVAKVLG---LKADF 90 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 ++ + L++ ID + T R+ + + + GQ ++ K I + Sbjct: 91 QSIDWSMKETELKNGTIDCIWNGYTATPSRQKRIAFSR--VYELSGQSLVVRKNSKIKNF 148 Query: 141 SQLSGASICVQAGTTTELTLADY---FKAHNMKYHPIVFERVEEIDAAYRAHRCD-AYTG 196 + G + +Q +T + Y K PI+++ +A R G Sbjct: 149 KDMKGKVLGIQESSTAQTDFDKYPQVLKRLVKGQKPILYQDNSSAFMDLQAGRTQGVLAG 208 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 + A Y + + +I +A + +GD +++ +YA+ ++ G Sbjct: 209 TVYAGYYATHIANNNNYKLISASAYPADRVAIGMRKGD---RTLINKINYALGVLQKDGT 265 Query: 257 TQKNINQVSKDTTN 270 ++ + +N Sbjct: 266 LRRINKKWLGINSN 279 >gi|229587811|ref|YP_002869930.1| cystine transporter subunit [Pseudomonas fluorescens SBW25] gi|229359677|emb|CAY46525.1| putative ABC transport system, exported protein [Pseudomonas fluorescens SBW25] Length = 264 Score = 142 bits (358), Expect = 9e-32, Method: Composition-based stats. Identities = 53/242 (21%), Positives = 89/242 (36%), Gaps = 12/242 (4%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + LG+IKK G +K G+ F+ V +G GF+V+ AL+ + K++ Sbjct: 27 AVAGEQLGNIKKAGEIKIGLEGTYPPFSFVDESGKLSGFEVELSEALAKELG---VKVKL 83 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISS 139 AL+SK++D + + R+ + +P T Q ++ K I + Sbjct: 84 QATPWDGILAALESKRLDAVVNQVTISEERKKKYDFS-KPYTVSGIQALVLKKNVDTIKT 142 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L+G + V GT E L D +K + R R DA D Sbjct: 143 ADDLAGKKVGVGLGTNYEQWLKDNQPKAIIK----TYNDDPTKFQDLRIGRIDAILIDR- 197 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L AL+ P + D S+ A+ +G+ E V+ + L + Sbjct: 198 -LAALEYAKKAP-DTAAAGDAFSRQEAGIALRKGEPELLAAVNQALDKLRADGTLKKLSE 255 Query: 260 NI 261 Sbjct: 256 KY 257 >gi|331015352|gb|EGH95408.1| glutamine ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 277 Score = 142 bits (358), Expect = 9e-32, Method: Composition-based stats. Identities = 42/240 (17%), Positives = 88/240 (36%), Gaps = 13/240 (5%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQY 80 +A L D+ + L CG+ + F+ + G DVD C+AL+ + + ++ Sbjct: 20 AHADQLSDVMSKKSLSCGVYADVPPFSAPDPKTRELVGMDVDLCKALAKHMGVE---LEL 76 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 PL+ + R ++ ++D++ N +T R + Y + ++ Sbjct: 77 KPLSVEARIPEVKMGRVDVIFANLAYTKSRADQIQF--SDPYYIAKETLVVRAANADQPK 134 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 S I G+T+E ++ P+ F+ A + ++ + Sbjct: 135 SFFKDKRISSTKGSTSEQSIR------LADATPVTFQDTGSAYMALQQNKVVGLVTNTMT 188 Query: 201 LYALKLTNDRPS-EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L E I + ++ P+ + QG+ + V+ + YAM A E+ Sbjct: 189 AIKLVGQAKASGVELAIAKEPMALEPIGAGMRQGEPAFLAKVNESLYAMEAAGEIDAIWA 248 >gi|238764882|ref|ZP_04625822.1| Cystine-binding periplasmic protein [Yersinia kristensenii ATCC 33638] gi|238696901|gb|EEP89678.1| Cystine-binding periplasmic protein [Yersinia kristensenii ATCC 33638] Length = 266 Score = 142 bits (358), Expect = 9e-32, Method: Composition-based stats. Identities = 50/258 (19%), Positives = 87/258 (33%), Gaps = 14/258 (5%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 V++ I L S++ + +L +K+RG L G+ F+ +G GF+VDF Sbjct: 14 MVAVALAIGLNVKSYAAS-DLLDQVKERGTLIVGLEGTYPPFSFQGEDGKLTGFEVDFAN 72 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 AL+ + K + P +L+SK+ID+ + R+ Sbjct: 73 ALAQHMG---VKAKITPTKWDGMLASLESKRIDVAINQVTISDERKKKYDF--STPYTVS 127 Query: 126 GQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 G + K S L G + V G+ E L + K ++ Sbjct: 128 GIQVLTKKGNEGNFSKPEDLVGKKVGVGLGSNYEQWLRENLK----GVDIRTYDDDPTKY 183 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 R R DA D L AL L + + ++ A+ + + E ++ Sbjct: 184 QDLRVGRTDAILVDR--LAALDLVKKTNNTLAVAGPAFARQESGIALRKNNPELLAAINK 241 Query: 244 THYAMVTAEELGITQKNI 261 M L + Sbjct: 242 AIAEMQEDGTLAKISEKY 259 >gi|167749252|ref|ZP_02421379.1| hypothetical protein EUBSIR_00203 [Eubacterium siraeum DSM 15702] gi|167657781|gb|EDS01911.1| hypothetical protein EUBSIR_00203 [Eubacterium siraeum DSM 15702] Length = 310 Score = 142 bits (358), Expect = 9e-32, Method: Composition-based stats. Identities = 40/240 (16%), Positives = 76/240 (31%), Gaps = 9/240 (3%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 S + + L +K G G++ NG+ GFD+D + + + K Sbjct: 68 SKAEGDNSLQKVKDAGQFILGLDATFKPMGYTDENGEIVGFDIDVAEEVCNRLGVKLVK- 126 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 P+N L + D + R+ + L+ + F++ ++ Sbjct: 127 --QPINWDTLTTDLNVGKCDCVWNGLSINEERQEKMNLSE--PYMKNAMVFVVKGDSTVA 182 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + L G I VQ G++ + L + A E DA D Sbjct: 183 KMDDLKGKKISVQNGSSAQTILEN--SAIKDDITISPIATNVEALQQLELGVVDAVFLDE 240 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 + + ++ L + + + A A + D + V T M +LG Sbjct: 241 VVADYEIKNSGK--DYKKLAEGLEEEQYAIAFRKNDQALRDAVQKTLGEMKADGKLGEIS 298 >gi|315282708|ref|ZP_07871055.1| amino acid ABC transporter, amino acid-binding protein [Listeria marthii FSL S4-120] gi|313613644|gb|EFR87441.1| amino acid ABC transporter, amino acid-binding protein [Listeria marthii FSL S4-120] Length = 271 Score = 142 bits (358), Expect = 9e-32, Method: Composition-based stats. Identities = 39/273 (14%), Positives = 94/273 (34%), Gaps = 14/273 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K ++++ +++L + S++ I K + G++ V + + Sbjct: 1 MKKGILIAVMAVVMLTLGACSSSESKEDQWERINKDKEVVIGLDDSFVPMGFRDKDDNLV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D +A+ + K ++ P++ + L++ ID++ T R+ + Sbjct: 61 GFDIDLAKAVFAEYG---IKAKFTPIDWTMKESELKNGSIDLIWNGYTVTDARKKQVAF- 116 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPI 174 + Q + K I+ S + ++ Q G ++ +A + P Sbjct: 117 -SNPYMKNEQVLVTLKSSNINKFSDMKDKTLGAQNGASSIDDMASKPEVLTDIINNNEPE 175 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +++ + R D D ++ I+ + A + + D Sbjct: 176 LYDTFDTAFIDLNNKRIDGLIIDEVYARYYIDKQKNKDDYNIITGGFDATDFAVGMRKSD 235 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 E + + A + G Q+ + D Sbjct: 236 KELQ---TKINEAFEKLYKEGKMQEISKKWFGD 265 >gi|15890697|ref|NP_356369.1| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|15158966|gb|AAK89154.1| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 278 Score = 142 bits (358), Expect = 9e-32, Method: Composition-based stats. Identities = 36/251 (14%), Positives = 87/251 (34%), Gaps = 13/251 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCR 65 +++ ++ + A L I L+C +V FA + GFDVD C+ Sbjct: 6 LTLTAAVLGVAAASPAMADQLDTITANKVLRCATFADVVPFAAPDPKTREMAGFDVDLCK 65 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 A++ + K + P++ + R ++ ++DI N +T R + Y Sbjct: 66 AIAKELG---VKAEIKPVSVEARVPEVKLGRVDITVANLAYTQSRAEQIQF--SDPYYLA 120 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 + I+ + S G + G+T+E+++ K P+ F+ A Sbjct: 121 KEMLIVPVEDAGKKKSDYEGQRVASTKGSTSEMSIK------LNKSEPLTFQDTASAYLA 174 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSE-HVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + + + + + ++ + + P+ + + + ++ Sbjct: 175 VQQGKARGMVANTMTTTKFVKESKTKGKPMRMIEEPMLYQPIGIGMAKDNPALTAKINEI 234 Query: 245 HYAMVTAEELG 255 + E+ Sbjct: 235 LRKLDADGEIN 245 >gi|312897774|ref|ZP_07757190.1| bacterial extracellular solute-binding protein, family 3 [Megasphaera micronuciformis F0359] gi|310621158|gb|EFQ04702.1| bacterial extracellular solute-binding protein, family 3 [Megasphaera micronuciformis F0359] Length = 265 Score = 142 bits (358), Expect = 9e-32, Method: Composition-based stats. Identities = 39/268 (14%), Positives = 95/268 (35%), Gaps = 12/268 (4%) Query: 1 MYKDFFVS-ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + I+ + + T ++++ K + G++ +G+ G Sbjct: 3 MKKWILAATIMTMTAMLATGCGSDSAKSEQ-KLPDKVIIGLDDNFPPMGFRDESGNLVGS 61 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D + + + ++++ P++ + AL+SKQ+D+L T R+ + + Sbjct: 62 DIDLAKEAAKRLG---IEVEFKPIDWDSKEAALKSKQVDMLWNGLSITEDRKKEIAFSDA 118 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +GQ ++ ++ + L+G ++ Q G+++ L + ++ Sbjct: 119 --YMKNGQIIVVRSDSPVTDRAGLAGKTLATQDGSSSIDCLNKAADFKASLGNVKLYGDN 176 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 R DA D S + ++ + + + Q DT + Sbjct: 177 VAALMDLELGRVDAVLVDSSV--GRYYMQKKQGVFKVIDKNMGEEEFGVGMRQEDTLLRD 234 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKD 267 ++ E G T K + + Sbjct: 235 KLNSVLK---QMSEDGTTAKISQKWFGE 259 >gi|296101732|ref|YP_003611878.1| cystine transport system substrate-binding protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295056191|gb|ADF60929.1| cystine transport system substrate-binding protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 266 Score = 142 bits (358), Expect = 9e-32, Method: Composition-based stats. Identities = 48/266 (18%), Positives = 87/266 (32%), Gaps = 15/266 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V + L+ ++L +K+RG L G+ F+ +G GF+V+F Sbjct: 14 VMAVALVAGMSVKTFAAENLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAEE 73 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + K P +L SK+ID++ + R+ G Sbjct: 74 LAKHLG---VKASLKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDF--STPYTVSG 128 Query: 127 QGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K I + + L G + V GT ++ + + ++ Sbjct: 129 IQALVKKGNEGSIKTAADLKGKKVGVGLGT----NYEEWLRQNVQGVDIRTYDDDPTKYQ 184 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 R R DA D L AL L + + D S+ A+ +G+ + + Sbjct: 185 DLRVGRIDAILVDR--LAALDLVKKTNNTLAVAGDAFSRQESGVAVRKGNEDLVKAIDSA 242 Query: 245 HYAMVTAEELGITQKNINQVSKDTTN 270 M L + D T Sbjct: 243 IADMQKDGSLKALSE--KWFGADVTK 266 >gi|153853350|ref|ZP_01994759.1| hypothetical protein DORLON_00748 [Dorea longicatena DSM 13814] gi|149754136|gb|EDM64067.1| hypothetical protein DORLON_00748 [Dorea longicatena DSM 13814] Length = 285 Score = 141 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 45/266 (16%), Positives = 81/266 (30%), Gaps = 20/266 (7%) Query: 1 MYKDF---FVSILCLIILFFTSFSTNASILGDIKKR----------GFLKCGINTGLVGF 47 M K V+ + + S ++ + KK L G + + Sbjct: 1 MKKRLVLLLVTAMAATTVLAGCGSKDSGSSDNGKKSSKEAKIENDDDTLIVGFDASFPPY 60 Query: 48 AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 +G++ GFD+D + + + K+ P++ + L S ID + Sbjct: 61 GYKDDSGEYVGFDLDLAQEVCDR---NNWKLVKQPIDWDSKDAELNSGTIDCIWNGFTMN 117 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 + + Q ++ GI + L G + VQ ++ L K Sbjct: 118 ---GREDDYTWSDPYIDNKQVVVVRSDSGIDDFAGLKGKHVEVQTDSSALAALEGDQKDL 174 Query: 168 NMKY-HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + CDA DI + P ++ IL IS Sbjct: 175 AATFADLNQVAEYNTAFMDLESGACDAIAMDIGVANYQVNSRKNPDDYKILDKEISSEQY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAE 252 A +G+TE + V T M Sbjct: 235 AVGFKKGNTELKDKVQKTLDEMAEDG 260 >gi|116629031|ref|YP_814203.1| amino acid ABC transporter periplasmic protein [Lactobacillus gasseri ATCC 33323] gi|311111174|ref|ZP_07712571.1| amino acid ABC transporter, amino acid-binding protein [Lactobacillus gasseri MV-22] gi|116094613|gb|ABJ59765.1| amino acid ABC transporter substrate-binding protein, PAAT family [Lactobacillus gasseri ATCC 33323] gi|311066328|gb|EFQ46668.1| amino acid ABC transporter, amino acid-binding protein [Lactobacillus gasseri MV-22] Length = 263 Score = 141 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 49/254 (19%), Positives = 87/254 (34%), Gaps = 7/254 (2%) Query: 11 CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70 + + AS IK+RG L G++ V + NG GFDVD A+ Sbjct: 15 VITSVGLAGCQRQASSWQKIKERGTLVIGVDDSFVPMDFRQKNGKLVGFDVDLATAVCKE 74 Query: 71 IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130 I P + ++ + L++ ID++ T R + + + Q + Sbjct: 75 IGLKPD---FQTIDWSMKETELRNGTIDVIWNGYTKTKARAKKVAFSR--PYLENDQILV 129 Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV-FERVEEIDAAYRAH 189 KK+ I++ Q+ G + VQ G++ L +Y + V ++ +A Sbjct: 130 TRKKEQINNYCQMKGRILGVQTGSSGADDLDNYPNVLKKRVKSTVLYDTYNNAFIDLKAG 189 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 R D D + E + I + D + ++ + Sbjct: 190 RIDGLLIDGVYANYYLAHSKYQKEFKKEKLPYPSEKFSVGINKKDQILKDKINQALDHLE 249 Query: 250 TAEEL-GITQKNIN 262 EL I QK N Sbjct: 250 KTGELEKIKQKWFN 263 >gi|289435074|ref|YP_003464946.1| amino acid ABC transporter, amino acid-binding protein [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289171318|emb|CBH27860.1| amino acid ABC transporter, amino acid-binding protein [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 271 Score = 141 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 43/273 (15%), Positives = 93/273 (34%), Gaps = 14/273 (5%) Query: 1 MYKDFFVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K V+I+ +I L + T I+K + G++ V + + Sbjct: 1 MKKVLVVAIMAIISLTLVACGSDETKEDQWKRIEKNKEVVIGLDDSFVPMGFRDKDDNLV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D +A+ + K ++ P++ + L++ ID++ T R+ + Sbjct: 61 GFDIDLAKAVFAEYG---IKAKFTPIDWTMKESELKNGSIDLIWNGYTVTDARKKKVAF- 116 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPI 174 + Q + K I S + ++ Q G ++ +A + P Sbjct: 117 -SNPYMKNEQVLVTLKSSNIKEFSDMKDKTLGAQNGASSIDDMAKKPEVLTDIIANNEPE 175 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +++ + R D D ++ I+ + + A + + D Sbjct: 176 LYDTFDVAFIDLNNKRIDGLIIDEVYARYYIDKQKNKDDYNIITGGFNPTDFAVGMRKSD 235 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 + V+ A T + G Q+ + D Sbjct: 236 KKLQTKVND---AFKTLYDEGKMQEISKKWFGD 265 >gi|83747214|ref|ZP_00944257.1| Hypothetical Protein RRSL_03006 [Ralstonia solanacearum UW551] gi|207739076|ref|YP_002257469.1| amino-acid-binding periplasmic protein [Ralstonia solanacearum IPO1609] gi|83726189|gb|EAP73324.1| Hypothetical Protein RRSL_03006 [Ralstonia solanacearum UW551] gi|206592448|emb|CAQ59354.1| amino-acid-binding periplasmic protein [Ralstonia solanacearum IPO1609] Length = 290 Score = 141 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 50/236 (21%), Positives = 88/236 (37%), Gaps = 12/236 (5%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 L I +R L G+ F + A GF+VD +AL + + ++ + + Sbjct: 42 TLDKIHQRHKLVVGVVLSGGPFGSIDPATQRAVGFNVDLAQALGRGLGVE---VETVQVQ 98 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF-IMHKKKGISSVSQL 143 R LQ ++D+L + R + LA P Y+ G ++ K + S L Sbjct: 99 PSNRIQFLQQGRVDLLVAAMELNPER--AELLAHVPTPYYRVGGVALVPKDSPVRQWSDL 156 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 G +C+ G++ LA A P F+ E A R + C A D + L Sbjct: 157 KGKDVCLSQGSSYTRPLAAEIGA-----TPKGFKSPAESLLALRGNNCAAAVHDATLLQP 211 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L TN ++ ++ + +P +G+ + + L T+K Sbjct: 212 LPRTNPEWKDYRVVGPDLIPAPTVIWARKGENDTVAALDRIVQGWHRDGWLIETEK 267 >gi|84489759|ref|YP_447991.1| polar amino acid ABC transporter periplasmic substrate-binding protein [Methanosphaera stadtmanae DSM 3091] gi|84373078|gb|ABC57348.1| predicted ABC-type polar amino acid transport system, periplasmic substrate-binding protein [Methanosphaera stadtmanae DSM 3091] Length = 282 Score = 141 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 45/272 (16%), Positives = 88/272 (32%), Gaps = 18/272 (6%) Query: 1 MYKDF--------FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 M K ++I+ +++F +TN + + L G ++ + Sbjct: 1 MNKKIGIIAGVIVLIAIIAAVLVFTGVINTNGNTGPN---DNVLVVGFDSEFPPYGYKDD 57 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 NG++ GFD+D + + + K P++ + L S ID + Sbjct: 58 NGEYVGFDLDLAQEVCNRNNWTLVK---QPIDWDAKDSELSSGTIDCIWNGFTIN---GR 111 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA-DYFKAHNMKY 171 + + Q + GI+S+S L G + Q ++ L D + Sbjct: 112 EDKYLWSKPYIDNKQVIVTKSNSGINSLSDLKGKQVETQKDSSALSALEGDQKPLADTFK 171 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + A CDA DI + PS++ IL + IS Sbjct: 172 QLVQIADYNTAFLDLDAGTCDAVAMDIGVAQYQVNSKSNPSDYKILDEEISSEQYGIGFK 231 Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 +G+ + + + T M + + Sbjct: 232 KGNEQLRDKIQQTLDEMEADGTIAKIASKYDS 263 >gi|238798559|ref|ZP_04642036.1| Cystine-binding periplasmic protein [Yersinia mollaretii ATCC 43969] gi|238717579|gb|EEQ09418.1| Cystine-binding periplasmic protein [Yersinia mollaretii ATCC 43969] Length = 272 Score = 141 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 47/264 (17%), Positives = 85/264 (32%), Gaps = 15/264 (5%) Query: 2 YKDFFVSILCLIILFFTSFS--TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + + ++ + + + A +L +K+RG L G+ F+ +G GF Sbjct: 13 RRRVVLGMVAVALATGLNVKSYAAADLLNQVKERGTLIVGLEGTYPPFSFQGEDGKLTGF 72 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 +VDF AL+ + K + P +L+SK+ID+ + R+ Sbjct: 73 EVDFANALAEHMG---IKAKITPTKWDGMLASLESKRIDVAINQVTISDERKKKYDF--S 127 Query: 120 PITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 G + K S L G + V G+ E L + K ++ Sbjct: 128 TPYTVSGIQVLTKKGNEGNFSKPEDLEGKKVGVGLGSNYEQWLRENLK----GVDIRTYD 183 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 R R DA D L AL L + ++ A+ + + E Sbjct: 184 DDPTKYQDLRVGRTDAILVDR--LAALDLVKKTNGTLAVAGPAFARQESGVALRKDNPEL 241 Query: 238 YNIVSWTHYAMVTAEELGITQKNI 261 ++ M L + Sbjct: 242 LAAINQAIAEMQKDGTLAKISEKY 265 >gi|329908117|ref|ZP_08274833.1| ABC transporter amino acid-binding protein [Oxalobacteraceae bacterium IMCC9480] gi|327546758|gb|EGF31695.1| ABC transporter amino acid-binding protein [Oxalobacteraceae bacterium IMCC9480] Length = 255 Score = 141 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 47/267 (17%), Positives = 94/267 (35%), Gaps = 18/267 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + F+ +I + A L +IK G L F + + GF+ Sbjct: 1 MKR--FLFAFSVITGLLLGPAVQARSLDEIKSAGTLIVATEGAYPPFNYFQGS-KLSGFE 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ A+ + KI++ L+ L+ + D++ + T R ++ Sbjct: 58 VELAEAMVKKMG---LKIEWKALSFDALLAGLRQDRWDMVMASFGVTEERSKAVLFTS-- 112 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+ G I+ K I + L+G ++ VQ G+T + F + Sbjct: 113 -PYYCSGGVIVSKDAAIKDAATLTGKTVAVQTGSTYMENVKKLAGVK----EVKNFPQDT 167 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + +A A R DA+ D + T P + + + + +A A+ +G+ Sbjct: 168 DARSALVAGRVDAWVSDRFVV--KTATESNPGLGLKVGEYLFVERIAAAVKKGNAPLAAA 225 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKD 267 V ++ G + + K+ Sbjct: 226 VDKALAEVIA---DGTYKAISEKFMKE 249 >gi|297619590|ref|YP_003707695.1| extracellular solute-binding protein family 3 [Methanococcus voltae A3] gi|297378567|gb|ADI36722.1| extracellular solute-binding protein family 3 [Methanococcus voltae A3] Length = 261 Score = 141 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 43/234 (18%), Positives = 85/234 (36%), Gaps = 13/234 (5%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L G + F + NG GFD+D + + +I+ + AL + Sbjct: 39 VLTVGSSVDFRPFEYMDENGKPTGFDMDIIHEIGRRL---DMEIEIIDSQFGGLIPALNT 95 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAG 153 K+ D + T R + + + GQ ++K I+++ LS + VQ Sbjct: 96 KKFDCVISAMTITENRSKEVKFSE--PYFEAGQILSVNKDNNEITTLEDLSDKKVGVQIA 153 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 TT +L ++ A Y + ++ + + + DA D + A + + P Sbjct: 154 TTGDLIASEN--ASKYNYEVKQYNKIGDAFMDMKNGKIDAVLVDN--VVATEYFQENPGL 209 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 + + D+++ A DTE + A+ + G + N+ D Sbjct: 210 YKLTGDLMTSESYGIATRLDDTELSEKID---KALADMKADGTYDEIYNKWFGD 260 >gi|298290179|ref|YP_003692118.1| extracellular solute-binding protein family 3 [Starkeya novella DSM 506] gi|296926690|gb|ADH87499.1| extracellular solute-binding protein family 3 [Starkeya novella DSM 506] Length = 270 Score = 141 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 44/253 (17%), Positives = 81/253 (32%), Gaps = 9/253 (3%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 A L DI G L+C + A+ + GFDVD+C L+ + K + Sbjct: 20 PAQADKLDDIIASGTLRCAVVLDFPPMGSRDASNNPIGFDVDYCNDLAKVLG---VKAEI 76 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + +R AL S ++D+ +T TL R + G + + GI Sbjct: 77 VETPFPDRIPALVSGRVDVGVASTSDTLERAKTAGFTI--PYFAFKMVVLTKDGLGIKDY 134 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L G +GT L L KA ++ ++ A + +A + Sbjct: 135 DSLKGKKTGSVSGTFEALALEKDVKAWGTG-SFRGYQTQADVFLALAQGQIEATVVTSTV 193 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 A+ + +A ++ + N ++ V G + Sbjct: 194 AAAIVKEGKYKGLMMGGDAPYDIDYVALIALRNEQGLINYLNLFINQQVRT---GRYKAL 250 Query: 261 INQVSKDTTNPDV 273 + P++ Sbjct: 251 YEKWVGLGEAPNL 263 >gi|186474262|ref|YP_001861604.1| extracellular solute-binding protein [Burkholderia phymatum STM815] gi|184196594|gb|ACC74558.1| extracellular solute-binding protein family 3 [Burkholderia phymatum STM815] Length = 270 Score = 141 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 57/279 (20%), Positives = 103/279 (36%), Gaps = 20/279 (7%) Query: 1 MYKDFFVSILC-----LIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M VS+L F S S +A +L +K G L+ G+ F A+G Sbjct: 1 MKLKTTVSVLLRGAVIATAFSFVSASAHAQDLLETVKSSGVLRVGLEGTYPPFDYKNASG 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + +GFDVD +A+++ + P Q++P LQ+ + D++ T R+ +L Sbjct: 61 ELEGFDVDVAKAVAARLGVKP---QFVPTEWSGILAGLQAGKFDVIVNQVTITPQRKQAL 117 Query: 115 GLAFRPITYFDGQGFI-MHKKKGISSVSQLSG-ASICVQAGTTTELTLADYFKAHNMKYH 172 + P T+ Q + K+ +S+++ SG + V GT D + Sbjct: 118 DFSQ-PYTFSAAQLIQRVDDKREFNSLAEFSGDKKLGVTLGTNY-----DQMARTVSGIN 171 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + E A R DA D L + T+ P + + + + Sbjct: 172 VQTYPGAPEKLRDLSAGRIDATLDDRLMLPYIIKTSKLPLRAGDVVKGAEQE-MGIPFRK 230 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 G+ + ++ +M L ++ D T P Sbjct: 231 GNPGFEKAINDALSSMKQDGTLKKIS--MHWFGSDVTQP 267 >gi|227824561|ref|ZP_03989393.1| periplasmic glutamine-binding protein [Acidaminococcus sp. D21] gi|226905060|gb|EEH90978.1| periplasmic glutamine-binding protein [Acidaminococcus sp. D21] Length = 263 Score = 141 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 54/272 (19%), Positives = 92/272 (33%), Gaps = 17/272 (6%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFD 60 K IL +++ S N+ +++ L G F +G+ GFD Sbjct: 6 KKLALTGILAAVVVTSLSGCGNSGSKDAAQQKKELIVGTEPSFAPFEFPDGKDGEITGFD 65 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +A++ + + K+ + F A+ + QID+ T R+ Sbjct: 66 MDLIKAMAKKMGYE--KVTIKGMGFDALFPAMNAGQIDVAMAGMSITEERKKQFLF--TD 121 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G I+ K I S++ L G I VQ GTT A F+ Sbjct: 122 PYYESGLMTIVRKDNTVIHSLADLKGKRIGVQLGTTGAQEAEKIEGA-----KVTNFDTS 176 Query: 180 EEIDAAYRAHRCDAYTGDISAL-YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + + DA D+ L Y LK ++ V P A +G E Sbjct: 177 DLACLELKNGNVDAVISDLPVLEYFLKKGGASYAKTVGTPKKG--DFYGIAAPKGKKELI 234 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 + ++ + + E QK ++ T Sbjct: 235 DGLNKALKELKDSGE---YQKIHDKWFGAETK 263 >gi|148550100|ref|YP_001270202.1| extracellular solute-binding protein [Pseudomonas putida F1] gi|148514158|gb|ABQ81018.1| extracellular solute-binding protein, family 3 [Pseudomonas putida F1] Length = 266 Score = 141 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 49/273 (17%), Positives = 101/273 (36%), Gaps = 17/273 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + +L + + A + D KRG L+ G++ + F G+ GF+ Sbjct: 1 MIKKYLSRLLVGVTALVAVTAAQAGAIDDAVKRGTLRVGMDPTYMPFQMTNKRGEIIGFE 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A++ ++ K + + AL + + D++ T R L L F Sbjct: 61 VDILKAMAKSMG---VKFEAVSTAYDGIIPALLTDKFDMIGSGMTLTQERN--LRLNFSE 115 Query: 121 ITYFDGQGFIMHK--KKGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVF 176 GQ ++ K I S L+ + + GTT E+ + Sbjct: 116 PFIVVGQTLLIRKELAGEIKSYKDLNNEKYRLTSKLGTTGEMVSKKLISKAKY----HGY 171 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + +E + DA+ D + + + + L + + PLA + +GD Sbjct: 172 DNEQEAVMDVVNGKADAFVYDAP-YNVVAVEKAGAGKLLFLEEPFTYEPLAFGLKKGD-- 228 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 Y+ +++ + + + G + ++ K+ Sbjct: 229 -YDSINFINNFLHQIKHDGTYDRIHDKWFKNKD 260 >gi|51892198|ref|YP_074889.1| glutamine ABC transporter substrate-binding protein [Symbiobacterium thermophilum IAM 14863] gi|51855887|dbj|BAD40045.1| glutamine ABC transporter substrate-binding protein [Symbiobacterium thermophilum IAM 14863] Length = 305 Score = 141 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 45/253 (17%), Positives = 85/253 (33%), Gaps = 14/253 (5%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKI 78 + AS L IK G L+ GI+ V +G GFD+D A++ + K Sbjct: 62 SAQPASSLERIKAEGVLRVGIDASYPPMEFVDEDGKTPIGFDIDLANAVAEKLG---VKA 118 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + ++ L D++ + T R+ + G + + Sbjct: 119 DFTIIDWAGIQAGLLGGHYDVIMSSMTITEERQKEMDFVQ---YLTMGIAYASRPGVEVR 175 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYH-PIVFERVEEIDAAYRAHRCDAYTGD 197 S + L G + VQ TT + + D ++ F + R D D Sbjct: 176 SDADLDGKIVVVQEETTAQYYVEDLMADKGIQPKELRSFPYATDAFRELANGRADVVAID 235 Query: 198 ISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 + D P ++ + + P+ A+ +G+TE + A+ E G+ Sbjct: 236 AP-VAGYYAQLD-PDQYRVTGFAEMDPDPIGIALRKGETELREALQ---KAVEELEAEGV 290 Query: 257 TQKNINQVSKDTT 269 ++ + D Sbjct: 291 LRELQVKWFGDAA 303 >gi|311898732|dbj|BAJ31140.1| putative glutamate ABC transporter substrate-binding protein [Kitasatospora setae KM-6054] Length = 303 Score = 141 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 44/240 (18%), Positives = 81/240 (33%), Gaps = 15/240 (6%) Query: 31 KKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 K RG L G + G GFD++ + +++ + +I++ +N+ R Sbjct: 63 KTRGKLVVGAKSDQPFLGFEDVQTGKRNGFDIEIAKMVAADLGFSADQIEFKTINSSARE 122 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASI 148 +L QID T R+ + A Y GQ +++K I+ ++ Sbjct: 123 TSLSGDQIDYYVGTYSITPKRKEQIDFA--GPYYIAGQSLLVNKDNTAITGPETTKDKAV 180 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 C AG+T+ + Y FE DA T D S L N Sbjct: 181 CTAAGSTSVAGIQKY------GAKVTTFESYSLCVEKLLTKEVDAVTTDDSILKGYAAKN 234 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 + ++ S+ + +GD ++ E+ G +K + + Sbjct: 235 Q--GQLKVVGTPFSEERYGVGLKKGDAALQKAINDALK---KHEDNGDWKKAYDATLGLS 289 >gi|77404680|ref|YP_345254.1| ABC amino acid transporter, periplasmic ligand binding protein [Rhodobacter sphaeroides 2.4.1] gi|77390330|gb|ABA81513.1| ABC amino acid transporter, periplasmic ligand binding protein [Rhodobacter sphaeroides 2.4.1] Length = 280 Score = 141 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 36/224 (16%), Positives = 79/224 (35%), Gaps = 9/224 (4%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 I+K G ++ G+ F +G +G +V+ R + F + + ++ Sbjct: 35 EAIQKAGKIRIGVKCDSPPFGASGPDGKPRGIEVEMARKIGDYAFGSEEGAELSCVTSEA 94 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 R +L + ++D++ T R + + I ++ ++ + +S L G S Sbjct: 95 RISSLNAGKLDLIIATLGRTAAR--QEVIDYSNIYFWGTSNVLVPADSPVQKLSDLQGRS 152 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 + V G T L A+ + + A R D + GD +Y L Sbjct: 153 VLVVKGATQIKWLE----ANIPDISIVQLNTTADGVQALMQGRADGFVGDGGLIYTLGGN 208 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 + ++ + + + +G+TE V+ + Sbjct: 209 YPK---LRVIEEGLDLGVNGVGMRKGETELQTFVNAVLDELRKG 249 >gi|172060526|ref|YP_001808178.1| extracellular solute-binding protein [Burkholderia ambifaria MC40-6] gi|171993043|gb|ACB63962.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MC40-6] Length = 264 Score = 141 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 56/277 (20%), Positives = 102/277 (36%), Gaps = 21/277 (7%) Query: 1 MYKDFFVSILCLIILFFT---SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M +L ++ + + + A +L +K+RG L+ G+ F G+ Sbjct: 1 MKISLLKKLLVAGLIGTSFAAATAHAADLLDQVKQRGTLRVGLEGTFPPFNSKNPQGELV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD +A+++ + K +++ LQ+ + D+++ T R+ +L Sbjct: 61 GFDVDIAKAVAAKLG---VKAEFVTTEWSGIIAGLQAGKFDVIANQVGITDKRKETLDF- 116 Query: 118 FRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 P + I K S+ L G + V G T + +A ++K +P Sbjct: 117 -SPAYTYSSAQLIQRKDDTRQFKSLEDLKGKKLGVALG-TNYMDMAKSVPGIDVKTYPGA 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 E A R DA D L L + P ++ S +P +G+ Sbjct: 175 ----PEYLRDLAAGRLDAALNDRLMLAYLTKNSQLP--LRPGANVGSANPSGIPFRKGNP 228 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSK-DTTNP 271 ++ + AM E G K ++ D T P Sbjct: 229 KFQKAIDD---AMAQLEADGTFTKISDKWFGIDVTKP 262 >gi|326315081|ref|YP_004232753.1| family 3 extracellular solute-binding protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323371917|gb|ADX44186.1| extracellular solute-binding protein family 3 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 274 Score = 141 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 36/247 (14%), Positives = 83/247 (33%), Gaps = 14/247 (5%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 +L +I+K G ++ I F + + +G+D+D ++ + K++ +P+ Sbjct: 39 DVLANIQKAGVVRVAIPQDFPPFGSLGTDLKLQGYDIDMANLVAKELG---VKVELVPVT 95 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 + R L + + D++ + R + + K+ I + L+ Sbjct: 96 STNRIPYLTTGKADLVISSLGKNAERAKVIDFTQAYAPFPKS--VYGPKEAVIKGPADLA 153 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G +I V G+T +L+L A +E +Y + T A+ Sbjct: 154 GKTIGVTRGSTEDLSLTKLAPA---SATIKRYEDNNATAQSYLTGQVQLVTLGNIVANAV 210 Query: 205 KLTNDRPSEHVILPDIISKS--PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 + ++ L + P + +G+ V + L + Sbjct: 211 ----NERTKLRQLDAKFAVEDTPCYVGVAKGEDALLQKVDAIITKAKSDGRLNDMSQRWM 266 Query: 263 QVSKDTT 269 ++ T Sbjct: 267 KMPLPAT 273 >gi|26991700|ref|NP_747125.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas putida KT2440] gi|24986801|gb|AAN70589.1|AE016701_9 amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas putida KT2440] gi|313501000|gb|ADR62366.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas putida BIRD-1] Length = 266 Score = 141 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 49/273 (17%), Positives = 101/273 (36%), Gaps = 17/273 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + +L + + A + D KRG L+ G++ + F G+ GF+ Sbjct: 1 MIKKYLSRLLVGVTALVAVTAAQAGAIDDAVKRGTLRVGMDPTYMPFQMTNKRGEIIGFE 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A++ ++ K + + AL + + D++ T R L L F Sbjct: 61 VDILKAMAKSMG---VKFEAVSTAYDGIIPALLTDKFDMIGSGMTLTQERN--LRLNFSE 115 Query: 121 ITYFDGQGFIMHK--KKGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVF 176 GQ ++ K I S L+ + + GTT E+ + Sbjct: 116 PFIVVGQTLLIRKELAGEIKSYKDLNNEKYRLTSKLGTTGEMVSKKLISKAKY----HGY 171 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + +E + DA+ D + + + + L + + PLA + +GD Sbjct: 172 DNEQEAVMDVVNGKADAFVYDAP-YNVVAVDKAGAGKLLFLDEPFTYEPLAFGLKKGD-- 228 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 Y+ +++ + + + G + ++ K+ Sbjct: 229 -YDSINFINNFLHQIKHDGTYDRIHDKWFKNKD 260 >gi|300697251|ref|YP_003747912.1| high affinity periplasmic solute-binding protein; high affinity transporter [Ralstonia solanacearum CFBP2957] gi|299073975|emb|CBJ53512.1| high affinity periplasmic solute-binding protein; high affinity transport system [Ralstonia solanacearum CFBP2957] Length = 263 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 50/236 (21%), Positives = 88/236 (37%), Gaps = 12/236 (5%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 L I +R L G+ F + A GF+VD +AL + + ++ + + Sbjct: 15 TLDKIHQRHKLVVGVVLSGGPFGSIDPATQRAVGFNVDLAQALGRGLGVE---VETVQVQ 71 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF-IMHKKKGISSVSQL 143 R LQ ++D+L + R + LA P Y+ G ++ K + S L Sbjct: 72 PSNRIQFLQQGRVDVLVAAMELNPER--AELLAHVPTPYYRVGGVALVPKDSPVRQWSDL 129 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 G +C+ G++ LA A P F+ E A R + C A D + L Sbjct: 130 KGKDVCLSQGSSYTRPLAAEIGA-----TPKGFKSPAESLLALRGNNCAAAVHDATLLQP 184 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L TN ++ ++ + +P +G+ + + L T+K Sbjct: 185 LPRTNPEWKDYRVVGPDLIPAPTVIWARKGENDTVAALDRIVQGWHRDGWLIETEK 240 >gi|73542698|ref|YP_297218.1| extracellular solute-binding protein [Ralstonia eutropha JMP134] gi|72120111|gb|AAZ62374.1| extracellular solute-binding protein, family 3 [Ralstonia eutropha JMP134] Length = 265 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 46/289 (15%), Positives = 96/289 (33%), Gaps = 30/289 (10%) Query: 1 MYKDFFVSILCLIILFFT-----SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + ++ + L S + + + G++ +N + Sbjct: 1 MKKFAALLLISTVALLGACGKKESAPAAGTEPAPVAAT-KIIVGLDDNFPPMGFRDSNNE 59 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFD+D + S + +++ P++ + L K++D+L T R+ ++ Sbjct: 60 LVGFDIDMAKEASRRLG---LTVEFKPIDWSAKEAELNGKRVDVLWNGLTITEERKQNIS 116 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + Q I+ + + + LSG + Q G++ + + Sbjct: 117 F--TAPYMTNHQIVIVGTNSPVKTKADLSGRIVGAQDGSSAVDAIKKEAQVAGSLKELKT 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F A R DA D + L + R E+ +L + + + D Sbjct: 175 FGDNVTALMDLSAGRLDAIVVD--EVVGRYLISKRAGEYRVLDENFGTEDYGVGVRKDD- 231 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ-RFLGIDKSS 283 AE LG K ++ + +D T + R+ G D + Sbjct: 232 ---------------AELLGKLDKTLHSMKEDGTAARIATRWFGADITK 265 >gi|332161361|ref|YP_004297938.1| cystine transporter subunit [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325665591|gb|ADZ42235.1| cystine transporter subunit [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 266 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 46/264 (17%), Positives = 84/264 (31%), Gaps = 15/264 (5%) Query: 2 YKDFFVSILCLIILFFTSFS--TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + + ++ + + + +L +K+RG L G+ F+ +G GF Sbjct: 7 RRRVVLGMMAVALATGLNVKSYAAGDLLDQVKERGTLIVGLEGTYPPFSFQGEDGKLTGF 66 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 +VDF AL+ + K + P +L+SK+ID+ + R+ Sbjct: 67 EVDFANALAEHMG---VKAKITPTKWDGMLASLESKRIDVAINQVTISDDRKKKYDF--S 121 Query: 120 PITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 G + K S L G + V G+ E L + K ++ Sbjct: 122 TPYTVSGIQVLTKKGNEGKFSKPEDLVGKKVGVGLGSNYEQWLRENLK----GVDIRTYD 177 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 R R DA D L AL L + ++ A+ + + E Sbjct: 178 DDPTKYQDLRVGRTDAILVDR--LAALDLVKKTNDTLTVAGPAFARQESGVALRKNNPEL 235 Query: 238 YNIVSWTHYAMVTAEELGITQKNI 261 ++ M L + Sbjct: 236 LAAINQAIAEMQKDGTLAKISEKY 259 >gi|120608918|ref|YP_968596.1| extracellular solute-binding protein [Acidovorax citrulli AAC00-1] gi|120587382|gb|ABM30822.1| amino acid ABC transporter substrate-binding protein, PAAT family [Acidovorax citrulli AAC00-1] Length = 274 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 36/247 (14%), Positives = 82/247 (33%), Gaps = 14/247 (5%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 +L +I+K G ++ I F + + +G+D+D ++ + K++ +P+ Sbjct: 39 DVLANIQKAGVVRVAIPQDFPPFGSLGTDLKLQGYDIDMANLVAKELG---VKVELVPVT 95 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 + R L + + D++ + R + + K+ I + L+ Sbjct: 96 STNRIPYLTTGKADLVISSLGKNAERAKVIDFTQAYAPFPKS--VYGPKEAAIKGPADLA 153 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G +I V G+T +L+L A +E +Y + T A+ Sbjct: 154 GKTIGVTRGSTEDLSLTKLAPA---SATIKRYEDNNATAQSYLTGQVQLVTLGNIVANAV 210 Query: 205 KLTNDRPSEHVILPDIISKS--PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 + + L + P + +G+ V + L + Sbjct: 211 ----NERTRLRQLDAKFAVEDTPCYVGVAKGEDALLRKVDAIITKARSDGRLNDMSQRWM 266 Query: 263 QVSKDTT 269 ++ T Sbjct: 267 KMPLPAT 273 >gi|115358997|ref|YP_776135.1| extracellular solute-binding protein [Burkholderia ambifaria AMMD] gi|115284285|gb|ABI89801.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia ambifaria AMMD] Length = 266 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 50/268 (18%), Positives = 103/268 (38%), Gaps = 19/268 (7%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 + ++ + S A +L +K+ G LK + F A G +GFDVD +A+ Sbjct: 11 GLAAALLCVVATASHAADLLDTVKQAGVLKIALEGTYPPFDYRNAEGQLEGFDVDVAKAV 70 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 ++ + P Q++ LQ+ + D++ T R+ +L + + Sbjct: 71 AARLGVKP---QFVTTEWSGILAGLQAGKFDVIVNQVAITPSRQQALDFSMPYVYSSAQL 127 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 + + S+ +L G + V G+ + L A +++ +P E + + Sbjct: 128 LQRQNDTRAFKSLDELKGKKVGVTMGS-NYVDLVKTVPAIDLQVYPGTPENLRD----LA 182 Query: 188 AHRCDAYTGDISALYALKLTND---RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 A R DA D L L + RP + + + +G+ ++ + Sbjct: 183 AGRIDAAVNDRLMLSYLIKNSHLPLRPGSVLAGGE----DRMGIPFRKGNPKFAKAIDD- 237 Query: 245 HYAMVTAEELGITQK-NINQVSKDTTNP 271 A+ + ++ G +K ++ DTT P Sbjct: 238 --AVASLQQDGTLKKISMQWFGTDTTRP 263 >gi|318605287|emb|CBY26785.1| cystine ABC transporter, periplasmic cystine-binding protein FliY [Yersinia enterocolitica subsp. palearctica Y11] Length = 253 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 47/257 (18%), Positives = 80/257 (31%), Gaps = 13/257 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 + + L +L +K+RG L G+ F+ +G GF+VDF A Sbjct: 1 MMAVALATGLNVKSYAAGDLLDQVKERGTLIVGLEGTYPPFSFQGEDGKLTGFEVDFANA 60 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + K + P +L+SK+ID+ + R+ G Sbjct: 61 LAEHMG---VKAKITPTKWDGMLASLESKRIDVAINQVTISDERKKKYDF--STPYTVSG 115 Query: 127 QGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 + K S L G + V G+ E L + K ++ Sbjct: 116 IQVLTKKGNEGKFSKPEDLVGKKVGVGLGSNYEQWLRENLK----GVDIRTYDDDPTKYQ 171 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 R R DA D L AL L + ++ A+ + + E ++ Sbjct: 172 DLRVGRTDAILVDR--LAALDLVKKTNDTLTVAGPAFARQESGVALRKNNPELLAAINQA 229 Query: 245 HYAMVTAEELGITQKNI 261 M L + Sbjct: 230 IAEMQKDGTLAKISEKY 246 >gi|229591447|ref|YP_002873566.1| putative ABC transporter extracellular solute-binding protein [Pseudomonas fluorescens SBW25] gi|229363313|emb|CAY50429.1| putative ABC transport system, extracellular solute-binding protein [Pseudomonas fluorescens SBW25] Length = 277 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 45/251 (17%), Positives = 95/251 (37%), Gaps = 18/251 (7%) Query: 9 ILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRA 66 + + L + + A L DI + L CG+ + F+ + G DVD C+A Sbjct: 6 LFTALALGPLAVAIAQADQLSDIMAKQSLSCGVYADVPPFSAPDPKTRELVGMDVDLCKA 65 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + ++ PL+ + R ++ ++D++ N +T R + Y Sbjct: 66 LAKTMG---VALELKPLSVEARIPEVKMGRVDVIFANLAYTKTRAEQIQF--SDPYYIAK 120 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 + ++ S I G+T+E ++ P+ F+ A Sbjct: 121 ETLVVRAANADQPKSFFKDKRISSTKGSTSEQSIR------LAGATPVTFQDTGSAYMAL 174 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVIL---PDIISKSPLAPAIIQGDTEWYNIVSW 243 + ++ + + ALKL N + V L + ++ P+ + + + + V+ Sbjct: 175 QQNKVVGLVTN--TMTALKLVNQAKAGGVELALAKEPMALEPIGAGMRRDEPAFLAKVNE 232 Query: 244 THYAMVTAEEL 254 + AM A E+ Sbjct: 233 SLMAMEKAGEI 243 >gi|218517221|ref|ZP_03514061.1| probable amino acid ABC transporter, substrate-binding protein [Rhizobium etli 8C-3] Length = 261 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 42/228 (18%), Positives = 84/228 (36%), Gaps = 15/228 (6%) Query: 14 ILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 + FT S A+ L +IKK+G + GI T F+ + A+G +G+D+D + ++ Sbjct: 1 AIAFTGASHIRQAGAATLDEIKKKGTITFGIVTDQPPFSFINASGQNEGYDIDLSKLMAK 60 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 + + + Y+P+ + R L + ++D+L R + Sbjct: 61 ELGVEAA---YVPITSANRIPQLMTGKVDMLICVMGVYPDRAKVVQY--VAPYAEINAAI 115 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 K G++ V +LSG SI V+ G++ + + D F+ A + Sbjct: 116 YGPKDGGVTKVEELSGHSIAVEKGSSMDKAVTDAAPK---DATIQRFDDASSAVQALLSG 172 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + + ++ I+ +S A+ E Sbjct: 173 QVEYLGSYSHQFGGVEKAAPGKYAQKIV---LSTEYEGIAVRPKSEEL 217 >gi|315929488|gb|EFV08683.1| Amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Campylobacter jejuni subsp. jejuni 305] Length = 168 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 43/167 (25%), Positives = 78/167 (46%), Gaps = 5/167 (2%) Query: 2 YKDFF-VSILCL-IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKG 58 K +++ L + F++ + L IK +G L G+ + +A + A G+ KG Sbjct: 4 RKSLLKLAVFALGACVAFSNANAAEGKLESIKSKGQLIVGVKNDVPHYALLDQATGEIKG 63 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 F+VD + L+ +I D KI+ + +NAK R L + +D + T R+ + Sbjct: 64 FEVDVAKLLAKSILGDDKKIKLVAVNAKTRGPLLDNGSVDAVIATFTITPERKRIYNFSE 123 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165 Y D G ++ K+K S++ + GA+I V TT+ + + K Sbjct: 124 --PYYQDAIGLLVLKEKKYKSLADMKGANIGVAQAATTKKAIGEAAK 168 >gi|254932817|ref|ZP_05266176.1| amino acid ABC transporter [Listeria monocytogenes HPB2262] gi|293584370|gb|EFF96402.1| amino acid ABC transporter [Listeria monocytogenes HPB2262] gi|328473972|gb|EGF44788.1| amino acid ABC transporter (binding protein) [Listeria monocytogenes 220] Length = 271 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 40/273 (14%), Positives = 96/273 (35%), Gaps = 14/273 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILG---DIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K ++++ +++L + S+ S IKK + G++ V + + Sbjct: 1 MKKGLLITVMLMVMLALGACSSGESKEDQWSRIKKDKEVVIGLDDSFVPMGFRDKDDNLV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D +A+ + K ++ P++ + L++ ID++ T R+ + + Sbjct: 61 GFDIDLAKAVFAEYG---IKAKFTPIDWTMKESELKNGSIDLIWNGYTVTDARKKQVAFS 117 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH---PI 174 + Q + K I+ S + ++ Q G ++ +A + + P Sbjct: 118 Q--PYMKNEQVLVTLKSSNINQFSDMKNKTLGAQNGASSIDDMAKKPEVLTDIINNNEPE 175 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +++ + R D D ++ + + A + + D Sbjct: 176 LYDTFDTAFIDLNNKRIDGLIIDEVYARYYIDKQKNKDDYNTITGGFDATDFAVGMRKSD 235 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 E + + A + G Q+ + D Sbjct: 236 KELQ---TKINEAFEKLYKEGKMQEISKKWFGD 265 >gi|115351507|ref|YP_773346.1| extracellular solute-binding protein [Burkholderia ambifaria AMMD] gi|115281495|gb|ABI87012.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia ambifaria AMMD] Length = 264 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 56/277 (20%), Positives = 102/277 (36%), Gaps = 21/277 (7%) Query: 1 MYKDFFVSILCLIILFFT---SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M +L ++ + + + A +L +K+RG L+ G+ F G+ Sbjct: 1 MKISLLKKLLVAGLIGTSFAAATAHAADLLDQVKQRGTLRVGLEGTFPPFNAKNPQGELV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD +A+++ + K +++ LQ+ + D+++ T R+ +L Sbjct: 61 GFDVDIAKAVAAKLG---VKAEFVTTEWSGIIAGLQAGKFDVIANQVGITDKRKETLDF- 116 Query: 118 FRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 P + I K S+ L G + V G T + +A ++K +P Sbjct: 117 -SPAYTYSSAQLIQRKDDTRQFKSLEDLKGKKLGVALG-TNYMDMAKSVPGIDVKTYPGA 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 E A R DA D L L + P ++ S +P +G+ Sbjct: 175 ----PEYLRDLAAGRLDAALNDRLMLAYLTKNSQLP--LRPGANVGSANPSGIPFRKGNP 228 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSK-DTTNP 271 ++ + AM E G K ++ D T P Sbjct: 229 KFQKAIDD---AMTQLEADGTFTKISDKWFGIDVTKP 262 >gi|167036063|ref|YP_001671294.1| extracellular solute-binding protein [Pseudomonas putida GB-1] gi|166862551|gb|ABZ00959.1| extracellular solute-binding protein family 3 [Pseudomonas putida GB-1] Length = 266 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 49/273 (17%), Positives = 101/273 (36%), Gaps = 17/273 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + +L + + A + D KRG L+ G++ + F G+ GF+ Sbjct: 1 MIKKYLSRLLVGVTALVAVTAAQAGAIDDAVKRGTLRVGMDPTYMPFQMTNKRGEIIGFE 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A++ ++ K + + AL + + D++ T R L L F Sbjct: 61 VDILKAMAKSMG---VKFEAVSTAYDGIIPALLTDKFDMIGSGMTLTQERN--LRLNFSE 115 Query: 121 ITYFDGQGFIMHK--KKGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVF 176 GQ ++ K I S L+ + + GTT E+ + Sbjct: 116 PFIVVGQTLLIRKELAGEIKSYKDLNNEKYRLTSKLGTTGEMVSKKLIGKAKY----HGY 171 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + +E + DA+ D + + + + L + + PLA + +GD Sbjct: 172 DNEQEAVMDVVNGKADAFVYDAP-YNVVAVEKAGAGKLLFLEEPFTYEPLAFGLKKGD-- 228 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 Y+ +++ + + + G + ++ K+ Sbjct: 229 -YDSINFINNFLHQIKHDGTYDRIHDKWFKNKD 260 >gi|119717234|ref|YP_924199.1| extracellular solute-binding protein [Nocardioides sp. JS614] gi|119537895|gb|ABL82512.1| amino acid ABC transporter substrate-binding protein, PAAT family [Nocardioides sp. JS614] Length = 294 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 58/251 (23%), Positives = 96/251 (38%), Gaps = 13/251 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD--WKGFDVDFCRALSSAIFDDPS 76 + S+ A L I G L + F + GFDVD A++ + D Sbjct: 53 TGSSEAPSLNLISD-GTLTVCSDVPYPPFENFDKTTPTGFAGFDVDIVNAIAEQL-DLEV 110 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 +I+ NA + LAL S Q D+ + T RE +G + Y Q ++ Sbjct: 111 QIKDSDFNALQSGLALNSGQCDMAASAMTITPEREQKIGFSDG--YYDSEQSLLVPSDSS 168 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 I+ + L G + VQ GTT E Y + +VF E+ AA +A + DA Sbjct: 169 IAGIGDLDGVKVGVQKGTTGEA----YANENASGADIVVFPSDGEMYAAIKAGQVDALLQ 224 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 D+ + P E ++ + A+ + +T + V+ A+ T ++ G Sbjct: 225 DLPVNLDHQNDPKAPGEFKVVEKYDTGESYGLAMKKDNTGLIDAVN---EALATMKDDGD 281 Query: 257 TQKNINQVSKD 267 QK + Sbjct: 282 YQKIYDTYFAT 292 >gi|239833356|ref|ZP_04681684.1| extracellular solute-binding protein [Ochrobactrum intermedium LMG 3301] gi|239821419|gb|EEQ92988.1| extracellular solute-binding protein [Ochrobactrum intermedium LMG 3301] Length = 279 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 42/246 (17%), Positives = 81/246 (32%), Gaps = 14/246 (5%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 A L IK G LK ++ F V + GFD A++ + P Q + Sbjct: 44 QADDLEKIKASGELKIAMSGQYPPFNFVNEKNEVVGFDASIGSAIAERMKLKP---QLIT 100 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 L++ + D + + T RE ++ Y G+ + + + + Sbjct: 101 TAWDGIVAGLRAGKFDTVVGSMTITPEREKAVDF--VGPYYHAGRAVFVKEDSAVQKLDD 158 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G ++ V G T E + + ++ + E+ + R DA D + Sbjct: 159 LKGKTLGVTLGETHEKWARE-----QGGWTIRTYKGLPELMLELNSGRVDAIVVDNIPVM 213 Query: 203 ALKLTNDRPSEHVILPDIISKS-PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 + + P+I S + AI + + E + ++ G +K Sbjct: 214 VAIKETGQKVRKLDTPNIEGGSVAIGIAIRKNNPELKAAMQKALDEIMA---DGTYEKIS 270 Query: 262 NQVSKD 267 Q Sbjct: 271 MQWIGS 276 >gi|253681643|ref|ZP_04862440.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Clostridium botulinum D str. 1873] gi|253561355|gb|EES90807.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Clostridium botulinum D str. 1873] Length = 268 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 50/278 (17%), Positives = 96/278 (34%), Gaps = 20/278 (7%) Query: 1 MYKDF---FVSILCLIILFFTSF----STNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M K ++ + L++L S S + L +KK G L+ G++ Sbjct: 1 MKKIISCVLITTIGLMLLAGCSSLGKQSGEDNSLKCVKKLGKLRIGLDDSYPPMEFRDEK 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 + GFD+D ++ + K++++ L LQSK+ D + T R+ S Sbjct: 61 NNLVGFDIDLSNEIAKRLG---VKVEFVTTEFSGILLGLQSKKFDAIIAGFSITEDRKKS 117 Query: 114 LGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + + GQ + K I +S L + Q G+ + K Sbjct: 118 VNFSE--PYILGGQVIAVKKGNTSIKKLSDLKDKIVGCQMGSNGQHCAEKNLKEIK---E 172 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + ++ + + R DA D + E +L +++ K P+ A Sbjct: 173 LRKYSKIPQAFSDMAIGRIDAVIMDAQV--GGYYLSKNTGEFEVLNEMVVKQPMGIAFKM 230 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 GD N V + E +++ ++ D Sbjct: 231 GDNSLKNEVQKIIDDLKK--EGTLSKLSLKWFGFDAYK 266 >gi|322374408|ref|ZP_08048922.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus sp. C300] gi|321279908|gb|EFX56947.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus sp. C300] Length = 279 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 100/280 (35%), Gaps = 17/280 (6%) Query: 1 MYKDFFVSILCLIILFF-TSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M + +L L FF T+ + A +K+G + G + V + NG Sbjct: 1 MKRKKIALVLALFFSFFLTACTQKASDPNQDNWAKYQKQGSITIGFDNTFVPMGFEEKNG 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + GFD+D +A+S + +I++ P++ + LQ+ ID + T R+ + Sbjct: 61 QYAGFDIDLAQAVSEKLG---IQIKFQPIDWDMKETELQNGTIDAIWNGYTATDERKEKV 117 Query: 115 GLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMK 170 I Y + Q ++ KK I S+ ++ + QAG++ L + K Sbjct: 118 AFT---IPYMENQQVLVSKKSQNIHSIQDMTDKVLGAQAGSSGYLNFEGQPELLKNQVKD 174 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 ++ E + R DA D + +++ + A + Sbjct: 175 QKANQYQSFNEALIDLKNDRIDALVIDRVYANYYLQSEGILNDYNVFSAGFESEAFAVGV 234 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELG-ITQKNINQVSKDTT 269 D ++ ++ + I+QK + + Sbjct: 235 RPADKTLLAALNQAFISLYQEGKFQEISQKWFGEDVATSQ 274 >gi|207724367|ref|YP_002254764.1| amino-acid-binding periplasmic protein [Ralstonia solanacearum MolK2] gi|206589585|emb|CAQ36546.1| amino-acid-binding periplasmic protein [Ralstonia solanacearum MolK2] Length = 290 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 50/236 (21%), Positives = 88/236 (37%), Gaps = 12/236 (5%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 L I +R L G+ F + A GF+VD +AL + + ++ + + Sbjct: 42 TLDKIHQRHKLVVGVVLSGGPFGSIDPATQRAVGFNVDLAQALGRGLGVE---VETVQVQ 98 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF-IMHKKKGISSVSQL 143 R LQ ++D+L + R + LA P Y+ G ++ K + S L Sbjct: 99 PSNRIQLLQQGRVDLLVAAMELNPER--AELLAHVPTPYYRVGGVALVPKDSPVRQWSDL 156 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 G +C+ G++ LA A P F+ E A R + C A D + L Sbjct: 157 KGKDVCLSQGSSYTRPLAAEIGA-----TPKGFKSPAESLLALRGNNCVAAVHDATLLQP 211 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L TN ++ ++ + +P +G+ + + L T+K Sbjct: 212 LPRTNPEWKDYRVVGPDLIPAPTVIWARKGENDTVAALDRIVQGWHRDGWLIETEK 267 >gi|304398823|ref|ZP_07380693.1| extracellular solute-binding protein family 3 [Pantoea sp. aB] gi|304353527|gb|EFM17904.1| extracellular solute-binding protein family 3 [Pantoea sp. aB] Length = 257 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 54/265 (20%), Positives = 89/265 (33%), Gaps = 13/265 (4%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V + LI ++L IK+RG L G+ F+ G GF+V+F Sbjct: 5 VMAVALIAGVNVKTFAAENLLNKIKERGTLLVGLEGTYPPFSFQDEKGKLTGFEVEFAEQ 64 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + K P +L +K+ID++ + R+ + P T Sbjct: 65 LAQHMG---VKASLKPTKWDGMLASLDAKRIDVVINQVTISDERKKKYDFS-TPYTVSGI 120 Query: 127 QGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 Q M I+ + L+G + V GT E L + K ++ Sbjct: 121 QALTMKANASTITKPADLAGKKVGVGLGTNYEQWLRENVK----GVDIRTYDDDPTKYQD 176 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 R+ R +A D L AL L + D S+ A+ +G+ + V+ Sbjct: 177 LRSGRLNAILVDR--LAALDLVKKTGDTMAVAGDAFSRQESGVAMRKGNDDLLKAVNQAI 234 Query: 246 YAMVTAEELGITQKNINQVSKDTTN 270 M L + D T Sbjct: 235 ADMQKDGSLSKLSQ--KWFGADVTK 257 >gi|116254532|ref|YP_770368.1| putative substrate binding periplasmic component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115259180|emb|CAK10298.1| putative substrate binding periplasmic component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 280 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 49/259 (18%), Positives = 94/259 (36%), Gaps = 13/259 (5%) Query: 3 KDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + F++ + + + S A+ L IK G +K G+ F+ NG G+D Sbjct: 6 RRLFLAATMGLAVAVGAGSAMAAERTLAAIKADGVIKIGVEGVFAPFSYR-ENGVIVGYD 64 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + + P +++ AL S + DI+ + +T R + + Sbjct: 65 VDLAEMMFKDLGVKP---EFVDTQWSGIVPALLSSKFDIIMSSLSYTKERMQKVNFSIPY 121 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF----KAHNMKY-HPIV 175 + I S +SG I ++AGT E ++ + KA + V Sbjct: 122 ADSSLAMLVRAADESTIKSFDDMSGKPIAIKAGTPEEASMPKFNEQVEKAKGNGFGEVKV 181 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F+ A D +++ L L + N P ++ ++ ++ S I + D Sbjct: 182 FDSEPMSILALNQGTVDGVISNMTNL-GLVIKNA-PGKYALVQNVAGSSLAGIGIRKEDE 239 Query: 236 EWYNIVSWTHYAMVTAEEL 254 E + A + +L Sbjct: 240 ELRKYIDEQLLAATKSGKL 258 >gi|229589724|ref|YP_002871843.1| putative ABC transporter exported solute-binding protein [Pseudomonas fluorescens SBW25] gi|229361590|emb|CAY48467.1| putative ABC transport system, exported solute-binding protein [Pseudomonas fluorescens SBW25] Length = 283 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 47/252 (18%), Positives = 93/252 (36%), Gaps = 13/252 (5%) Query: 4 DFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDV 61 S+ L + A L I++R + G+ F + G+ +G++V Sbjct: 8 KALASLCLAGALASGASLARADATLDKIEQRHVINIGVMLSGPPFGTIDPKTGEHQGYNV 67 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + + ++ A+ + + + + A R LQ ++DIL N +T R L + P Sbjct: 68 ELAKGVAKALGVEANTV---SVLAPNRVQFLQQGKVDILIANMQFTEER--GEILDYVPT 122 Query: 122 TYFD-GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + G ++ K GI+ + L G +CV G+ L + + A F Sbjct: 123 PYEEVGGAALIRKGSGITQWADLKGKPVCVSQGSNFIKPLQETYGAQ-----IKAFRSQS 177 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + R + C A ++AL + + LP + S + +G+ + Sbjct: 178 ESLLSLRGNGCVAAVHVSPTMHALLSDAEWAGYEIPLPGDLIPSNSVIWLRKGEHDTQAK 237 Query: 241 VSWTHYAMVTAE 252 + + Sbjct: 238 LDAIVRDWHRSG 249 >gi|170698703|ref|ZP_02889769.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] gi|170136407|gb|EDT04669.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] Length = 264 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 56/277 (20%), Positives = 102/277 (36%), Gaps = 21/277 (7%) Query: 1 MYKDFFVSILCLIILFFT---SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M +L ++ + + + A +L +K+RG L+ G+ F G+ Sbjct: 1 MKISLLKKLLVAGLIGTSFAAATAHAADLLDQVKQRGTLRVGLEGTFPPFNAKNPQGELV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD +A+++ + K +++ LQ+ + D+++ T R+ +L Sbjct: 61 GFDVDIAKAVAAKLG---VKAEFVTTEWSGIIAGLQAGKFDVIANQVGITDKRKETLDF- 116 Query: 118 FRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 P + I K S+ L G + V G T + +A ++K +P Sbjct: 117 -SPAYTYSSAQLIQRKDDTRQFKSLDDLKGKKLGVALG-TNYMDMAKSVPGIDVKTYPGA 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 E A R DA D L L + P ++ S +P +G+ Sbjct: 175 ----PEYLRDLAAGRLDAALNDRLMLAYLTKNSQLP--LRPGANVGSANPSGIPFRKGNP 228 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSK-DTTNP 271 ++ + AM E G K ++ D T P Sbjct: 229 KFQKAIDD---AMAQLEADGTFTKISDKWFGIDVTKP 262 >gi|323142138|ref|ZP_08076983.1| glutamine ABC transporter periplasmic protein [Phascolarctobacterium sp. YIT 12067] gi|322413398|gb|EFY04272.1| glutamine ABC transporter periplasmic protein [Phascolarctobacterium sp. YIT 12067] Length = 255 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 47/272 (17%), Positives = 82/272 (30%), Gaps = 20/272 (7%) Query: 1 MYKD--FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WK 57 M K F + + + T D L+ G F K Sbjct: 1 MKKVLVFLMMAIMACSMLLTGCGGEEKKAAD--SAKVLRVGTEPVFAPFEFPKEGSKDLT 58 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD++ AL + K++ + + AL S ID+ T R+ + Sbjct: 59 GFDIELIEALGKKMGY---KVEMVSMGFDALIPALNSNNIDVAIAGMTITDERKKVVDFT 115 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y G ++ K + S+ L G +I Q GTT E A F Sbjct: 116 ES--YYTSGLMIMVRKDSNVKSIDDLKGKTIACQIGTTGENKSRTVEGA-----KVKAFN 168 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 +E + DA GD + + + + + P A+ +G Sbjct: 169 TQDEASLELKNGGADAVIGDAPVIEYYMTKAGK-DFAKTVGERMEAEPYGIAVKKGS--- 224 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 + + A+ ++ G K + + Sbjct: 225 -KLAGDLNKALAELKKSGEYDKLYTKWFGEKK 255 >gi|90577483|ref|ZP_01233294.1| putative amino acid ABC transporter [Vibrio angustum S14] gi|90440569|gb|EAS65749.1| putative amino acid ABC transporter [Vibrio angustum S14] Length = 270 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 53/252 (21%), Positives = 89/252 (35%), Gaps = 18/252 (7%) Query: 1 MYKDFFVSILCLIILFFTS--FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + F V I L +L S + S L IK+RG L+ G++T V +A G+ G Sbjct: 1 MKRFFAVLITALTLLLSASHALAAEKSTLEQIKERGTLRVGLST-FVPWAMRDKQGELIG 59 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 F+VD + L+ K++++P AL + + D++ T R +S+ Sbjct: 60 FEVDVAKRLAKDAG---VKVEFIPTAWDGIIPALLAGKFDVIIGGMSITPQRNLSVLF-- 114 Query: 119 RPITYFDGQGFIMHKKKGIS--SVSQLSGASI--CVQAGTTTELTLADYFKAHNMKYHPI 174 G K+ S++ + S+ V+ G T T YF Sbjct: 115 TTPYSHSGVQLAASKELAGDKLSIADYNKRSVTLAVRRGAVTAQTAKKYFPKA----KLR 170 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 F+ + A + L + + +S+ AI QGD Sbjct: 171 QFDDESQAFQEVLNGNAQAVLASTPKPEQMTLQYKD-KLFLPFKERLSQGSEGFAIRQGD 229 Query: 235 TEWYN-IVSWTH 245 N +W Sbjct: 230 FNLLNFFNNWIL 241 >gi|257888302|ref|ZP_05667955.1| extracellular solute-binding protein [Enterococcus faecium 1,141,733] gi|257824356|gb|EEV51288.1| extracellular solute-binding protein [Enterococcus faecium 1,141,733] Length = 271 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 41/257 (15%), Positives = 84/257 (32%), Gaps = 11/257 (4%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 ++ +A I + + G++ V +G GFD+D +A+ Sbjct: 21 SNKKASADNWAAINEEKKIVIGLDDTFVPMGFRDKDGKLTGFDIDLAKAVFEQYG---IT 77 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 + + P++ + L + ID++ T RE + + Q I K+ GI Sbjct: 78 VDFQPIDWSMKEFELNNGTIDLIWNGYSKTPAREKKVQF--TKPYMENDQVLITPKESGI 135 Query: 138 SSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 +S Q+ + Q G++ + K ++++ E ++ R D Sbjct: 136 TSFEQMKNKRLGAQNGSSGYDVFTKQPEVLKERVKNQDAVLYDSFNEALIDLKSGRIDGL 195 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D + + + A + + D V + A E+ Sbjct: 196 LMDKVYADYYLKQRNELEDFNMTKGSYESEDFAVGVRKSDDTL---VKKINEAFDRLEKT 252 Query: 255 GITQKNINQVSKDTTNP 271 G QK N+ + P Sbjct: 253 GEFQKISNKWFGEDVTP 269 >gi|302336265|ref|YP_003801472.1| amino acid ABC transporter substrate-binding protein, PAAT family [Olsenella uli DSM 7084] gi|301320105|gb|ADK68592.1| amino acid ABC transporter substrate-binding protein, PAAT family [Olsenella uli DSM 7084] Length = 323 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 54/257 (21%), Positives = 97/257 (37%), Gaps = 12/257 (4%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFC 64 F ++L + + + +S IK G + G FA++ +G +GFD Sbjct: 56 FDALLAAGAVADDASVSASSWAKRIKDAGSFRLGGVQTSTLFAQLDETDGKLRGFDAGLA 115 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 + L I D SK + + + R LQ+ Q+D + T R+ ++ A Y Sbjct: 116 QLLVRYILGDESKYDFTQVTSSTRESVLQNDQVDAVFATYSITDDRKKAISFA--GPYYT 173 Query: 125 DGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 QG ++ I+SV L+ ++ VQ+G+T +A+ + F EE Sbjct: 174 SQQGILVAASNSDINSVDDLADKNVAVQSGSTGPQIVAELAPKAVTQ----EFTTDEEAR 229 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-SPLAPAIIQGDTEWYNIVS 242 A R DAY D++ L P ++ + + + D++ V+ Sbjct: 230 TALEQGRVDAYVIDVTM--QLSSIAKNPGKYRLAGEAFGPTDAYGIGLP-LDSDGVAFVN 286 Query: 243 WTHYAMVTAEELGITQK 259 A+ G K Sbjct: 287 AWLKAIEDDGTWGKLWK 303 >gi|153010171|ref|YP_001371385.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC 49188] gi|151562059|gb|ABS15556.1| extracellular solute-binding protein family 3 [Ochrobactrum anthropi ATCC 49188] Length = 261 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 42/246 (17%), Positives = 81/246 (32%), Gaps = 14/246 (5%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 A L IK G LK ++ F V + GFD A++ + P Q + Sbjct: 26 QADDLEKIKASGELKIAMSGQYPPFNFVNEKNEVVGFDASIGSAIAERMQLKP---QLIT 82 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 L++ + D + + T RE ++ Y G+ + + + + Sbjct: 83 TAWDGIVAGLRAGKFDTVVGSMTITPEREKAVDF--VGPYYHAGRAVFVKEDSAVQKLDD 140 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G ++ V G T E + + ++ + E+ + R DA D + Sbjct: 141 LKGKTLGVTLGETHEKWARE-----QGGWTIRTYKGLPELMLELNSGRVDAIVVDNIPVM 195 Query: 203 ALKLTNDRPSEHVILPDIISKS-PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 + + PDI S + AI + + E + ++ G +K Sbjct: 196 VAIKETGQKVRKLDTPDIEGGSVAIGIAIRKNNPELKAAMQKALDEIMA---DGTYEKIS 252 Query: 262 NQVSKD 267 + Sbjct: 253 MEWVGS 258 >gi|325063352|gb|ADY67042.1| amino acid ABC transporter, substrate binding protein [Agrobacterium sp. H13-3] Length = 278 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 39/271 (14%), Positives = 91/271 (33%), Gaps = 16/271 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCR 65 +++ + + A L I L+C +V FA + GFDVD C Sbjct: 6 LTLTVALAGTALASPAAADQLDTIMANKVLRCATFADVVPFAAPDPKTREMAGFDVDLCN 65 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 A++ + K + P++ + R ++ ++DI N +T R + Y Sbjct: 66 AIAKELG---VKAEVKPVSVEARVPEVKLGRVDITVANLAYTQSRAEQIQF--SDPYYLA 120 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 + I+ S G + G+T+E+++ K P+ F+ A Sbjct: 121 KEMLIVPVDDAGKKKSDYEGQRVASTKGSTSEMSIK------LNKSEPLTFQDTASAYLA 174 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSE-HVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + + + + + ++ + + P+ + + + ++ Sbjct: 175 VQQGKARGMVANTMTTTKFVNESKTKGKPMRMIEEPMLYQPIGVGMAKDNPALTAKINEV 234 Query: 245 HYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 + + E+ K ++ T + R Sbjct: 235 LRTLDASGEIN---KIWDKWLGPNTEYKMTR 262 >gi|258654113|ref|YP_003203269.1| family 1 extracellular solute-binding protein [Nakamurella multipartita DSM 44233] gi|258557338|gb|ACV80280.1| extracellular solute-binding protein family 3 [Nakamurella multipartita DSM 44233] Length = 321 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 37/202 (18%), Positives = 71/202 (35%), Gaps = 8/202 (3%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 G + GI G +G + GFDV+ + ++ + I ++ + ER + Sbjct: 84 GKVTVGIKFDQPGLGLKNPDGSFSGFDVEVAKYVAGKLGVPEGGITFVESKSAEREGLID 143 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQA 152 ++D + T R+ + A + Q ++ I+ ++G +C Sbjct: 144 RGEVDYIVATYSITDARKEKVNFA--GPYFIAAQDLLVKSDNTDITGPEAMAGKILCSVT 201 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 G+T+ + D + A + E A R+ DA T D L P Sbjct: 202 GSTSAQKVKDNYAA---DVALQEYGTYTECVEALRSGAVDAVTTDNVILAGYAAQ--YPG 256 Query: 213 EHVILPDIISKSPLAPAIIQGD 234 E ++ S + +GD Sbjct: 257 ELKVVGKGFSTENYGIGLKKGD 278 >gi|293605337|ref|ZP_06687722.1| amino acid ABC superfamily ATP binding cassette transporter [Achromobacter piechaudii ATCC 43553] gi|292816276|gb|EFF75372.1| amino acid ABC superfamily ATP binding cassette transporter [Achromobacter piechaudii ATCC 43553] Length = 264 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 44/264 (16%), Positives = 87/264 (32%), Gaps = 22/264 (8%) Query: 1 MYKDFFVSILCLIILFFTSFS---------TNASILGDIKKRGFLKCGINTGLVGFAEVK 51 M K V ++ + A + + G++ Sbjct: 1 MKKLTAVFLVSATTMLTACGPSDDAKPTAGAQAPAMAK-----KVVVGLDDNFPPMGFRD 55 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 A+ GFDVD + S + + +++ P++ + L K++D+L T R+ Sbjct: 56 ASNQIVGFDVDMAKEASKRLGVE---VEFKPIDWSAKEAELNGKRVDVLWNGLTITEERK 112 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 ++ + Q I+ + + L+G ++ Q G++ +A A +K Sbjct: 113 KNISF--TAPYMANHQIIIVGTASPVKVKNDLAGKTVGAQDGSSATDAIAKDPVAAQIK- 169 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 F A R DA D + L + R E+ +L + + Sbjct: 170 EVKKFGDNVTALMDLAAGRLDAIVVD--EVVGRYLISKRTGEYRVLDENFGTEDYGVGVR 227 Query: 232 QGDTEWYNIVSWTHYAMVTAEELG 255 + DTE + T +M G Sbjct: 228 KDDTELLGKLDKTLDSMKQDGTAG 251 >gi|306825320|ref|ZP_07458662.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432756|gb|EFM35730.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 279 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 48/280 (17%), Positives = 99/280 (35%), Gaps = 17/280 (6%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M K +++ F T+ + A +K+G + G + V + NG Sbjct: 1 MKRKKIALALALFFSFFLTACTQKASDPNQDNWAKYQKQGSITIGFDNTFVPMGFEEKNG 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + GFD+D +A+S + +I++ P++ + LQ+ ID + T R+ + Sbjct: 61 QYAGFDIDLAQAVSEKLG---IQIKFQPIDWDMKETELQNGTIDAIWNGYTATDERKEKV 117 Query: 115 GLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMK 170 I Y + Q ++ KK I S+ ++ + QAG++ L + K Sbjct: 118 AFT---IPYMENQQVLVSKKSQNIHSIQDMTDKILGAQAGSSGYLNFEGQPELLKNRVKD 174 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 ++ E + R DA D + S++ + A + Sbjct: 175 QKANQYQSFNEALIDLKNDRIDALLIDRVYANYYLQSEGILSDYNVFSAGFESEAFAVGV 234 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELG-ITQKNINQVSKDTT 269 D ++ ++ + I+QK + + Sbjct: 235 RPADKTLLAALNQAFISLYQEGKFQEISQKWFGEDVATSQ 274 >gi|221218204|ref|YP_002524231.1| ABC amino acid transporter, periplasmic ligand binding protein [Rhodobacter sphaeroides KD131] gi|221163231|gb|ACM04197.1| ABC amino acid transporter, periplasmic ligand binding protein [Rhodobacter sphaeroides KD131] Length = 280 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 35/224 (15%), Positives = 79/224 (35%), Gaps = 9/224 (4%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 I+K G ++ G+ F +G +G +V+ + + F + + ++ Sbjct: 35 EAIQKAGKIRIGVKCDSPPFGASGPDGKPRGIEVEMAKKIGDYAFGSEEGAELSCVTSEA 94 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 R +L + ++D++ T R + + I ++ ++ + +S L G S Sbjct: 95 RISSLNAGKLDLIIATLGRTAAR--QEVIDYSNIYFWGTSNVLVPADSPVQKLSDLQGRS 152 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 + V G T L A+ + + A R D + GD +Y L Sbjct: 153 VLVVKGATQIKWLE----ANIPDISIVQLNTTADGVQALMQGRADGFVGDGGLIYTLGGN 208 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 + ++ + + + +G+TE V+ + Sbjct: 209 YPK---LRVIEEGLDLGVNGVGMRKGETELQTFVNAVLDELRKG 249 >gi|239821013|ref|YP_002948198.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] gi|239805866|gb|ACS22932.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] Length = 280 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 42/254 (16%), Positives = 89/254 (35%), Gaps = 13/254 (5%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDV 61 ++ F L S +A DI R L+CG + FA + G DV Sbjct: 4 RNVFRLTTIGTCLCAASLLAHADQWSDISARKELRCGTFADVPPFAAPDPKTREMVGHDV 63 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D C AL+ + + PL+ + R ++ ++D+ N +T R + Sbjct: 64 DLCHALAKELGLTA---KVTPLSVEARVPEVKLGRVDVTIANLAYTKSRGEQIQF--SDP 118 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y + + ++ + G + G+T+EL++ P+ F+ Sbjct: 119 YYVAKEMLAVKASDPGAAKADFKGKRLSSTKGSTSELSIKMN------GSEPVTFQDTGS 172 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPS-EHVILPDIISKSPLAPAIIQGDTEWYNI 240 A + ++ + + L + ++ + + P+ + + + Sbjct: 173 AFMAVQQNKSVGMVANTMTITKLVNQSKTEGVALKMIKEPMVLQPIGIGMKKDEPVLLAK 232 Query: 241 VSWTHYAMVTAEEL 254 V+ YA+ + EL Sbjct: 233 VNGALYALEKSGEL 246 >gi|116491635|ref|YP_811179.1| amino acid ABC transporter periplasmic protein [Oenococcus oeni PSU-1] gi|290891244|ref|ZP_06554306.1| hypothetical protein AWRIB429_1696 [Oenococcus oeni AWRIB429] gi|116092360|gb|ABJ57514.1| amino acid ABC transporter substrate-binding protein, PAAT family [Oenococcus oeni PSU-1] gi|290479208|gb|EFD87870.1| hypothetical protein AWRIB429_1696 [Oenococcus oeni AWRIB429] Length = 282 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 38/233 (16%), Positives = 78/233 (33%), Gaps = 7/233 (3%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 IKK +K G++ + +G GFDVD A + K+++ P+N + Sbjct: 44 RIKKSKEIKIGLDDTFIPMGFRNKSGKLIGFDVDLANATFKKLG---IKVEWEPINWSTK 100 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 L QID + + R+ + + Q + K I+S + + G ++ Sbjct: 101 EQLLNDGQIDAIWNGYTISAARKKKVAFSI--PYKKGTQVLVTLSKDKINSFADMKGKTL 158 Query: 149 CVQAGTTTELTLADY--FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 +Q G+T + Y +K P ++ ++ +A R D Sbjct: 159 GLQNGSTAQTQFQQYKNLLKKYVKGTPQKYDTFDKAFMDLKAGRIQGILVDSMYAGYYVK 218 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 ++ I+ + D + V+ ++ Q+ Sbjct: 219 HLSDSQDYKIIYGGYPTDENGVGFRKSDLKLREEVNTVLKKFQQNGKMKSLQE 271 >gi|213852458|ref|ZP_03381990.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 201 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 33/180 (18%), Positives = 64/180 (35%), Gaps = 5/180 (2%) Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151 +Q+ D +T L R+ + G + K I L G ++ V Sbjct: 1 MQNGTFDFECGSTTNNLERQKQAAF--SDTIFVVGTRLLTKKGGDIKDFPDLKGKAVVVT 58 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 +GTT+E+ L + M I + + + R A+ D + L + +P Sbjct: 59 SGTTSEILLHKLNEEQKMGMRIISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKP 118 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 I+ S+ + + D E+ ++ T T+ E +K ++ K+ P Sbjct: 119 DNWEIVGKPQSQEAYGCMLRKNDPEFKKLMDDTIAQAQTSGE---AEKWFDKWFKNPIPP 175 >gi|300855677|ref|YP_003780661.1| putative extracellular amino acid-binding protein [Clostridium ljungdahlii DSM 13528] gi|300435792|gb|ADK15559.1| predicted extracellular amino acid-binding protein [Clostridium ljungdahlii DSM 13528] Length = 263 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 58/273 (21%), Positives = 100/273 (36%), Gaps = 22/273 (8%) Query: 1 MYK--DFFVSILCLIILFF---TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K +S + + LF T+ + L +K G L G++ Sbjct: 1 MKKIGMIMLSAIMVFTLFTGCGTNAGEQDNSLNRVKDAGKLTIGLDDSYPPMEFRDNKNK 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFD+D AL+ + K+ + + LALQS + D++ + T R+ + Sbjct: 61 LSGFDIDLGNALAQKLG---VKLNIVVTDFNGIVLALQSGKFDVILASMSITDERKKKID 117 Query: 116 LAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 Y DG I+ K I + + L G + VQ G T E A +K Sbjct: 118 FVG---PYIDGGQIIITKAGNSSIKTKNDLKGKIVGVQLGATGEQAAAKVSGIKEIK--- 171 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 ++++ E R DA D + S +VIL D ++K P+ I + Sbjct: 172 -KYDKITEAFHEVNIGRIDAVVCDAQV--GQYYISKDKSNYVILKDRLTKEPIGIGIKKK 228 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 D + ++ A+ ++ G K + Sbjct: 229 DKKLEEALN---KALDDLKKDGTMSKLSTKWFG 258 >gi|331002454|ref|ZP_08325972.1| hypothetical protein HMPREF0491_00834 [Lachnospiraceae oral taxon 107 str. F0167] gi|330410270|gb|EGG89704.1| hypothetical protein HMPREF0491_00834 [Lachnospiraceae oral taxon 107 str. F0167] Length = 274 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 92/280 (32%), Gaps = 20/280 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG-----------FLKCGINTGLVGFAE 49 M K + + +L I+L S ++ + + + K G + Sbjct: 1 MKKIYLLGVLATIMLAGCSSASTDTSIAESKLTDETSIAGTDTNTTFTVGFDQDFPPMGF 60 Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 V +G++ GFD+D ++ + + I+Y P+ + + L S ID + T Sbjct: 61 VGDDGEFTGFDLDLAAEVAKRLGKE---IKYQPIAWDAKDMELTSGNIDCIWNGFS-TQN 116 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 RE + + Q F++ I+S L+G ++ VQ ++ E L + + Sbjct: 117 REDK--YTWTKPYMKNDQVFVVRSDSDINSFEDLAGKTVEVQTDSSAEAVLKENTELSGT 174 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 DA S + ++T +L +S A Sbjct: 175 FGKLQTVADFNTGFMDLEMGGVDALAM-NSVVANYQITKRGGEGFKVLDKPLSSEEYAVG 233 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 G+T + V M L + KD T Sbjct: 234 FKLGNTILRDEVQTALEEMKADGTLKSISE--KWFGKDVT 271 >gi|222102916|ref|YP_002539955.1| ABC transporter substrate binding protein (amino acid) [Agrobacterium vitis S4] gi|221739517|gb|ACM40250.1| ABC transporter substrate binding protein (amino acid) [Agrobacterium vitis S4] Length = 279 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 43/253 (16%), Positives = 92/253 (36%), Gaps = 16/253 (6%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 L DI L+C + FA + GFDVD C A+++ + K + P+ Sbjct: 25 DQLADIMAAKTLRCATFADVPPFASPDPKTREMAGFDVDLCNAIAAKLG---VKAEIKPV 81 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 + + R ++ ++DI N +TL R + Y + I+ + + Sbjct: 82 SVEARVPEVKLGRVDITVANLAYTLSRAEQIQF--SDPYYLAKEMLIVPADTAGKTKADF 139 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 SG + G+T+E+++ K P+ F+ A + + + + Sbjct: 140 SGKRLASTKGSTSEMSIK------LNKSDPLTFQDTASAYLAVQQGKAEGMVANTMTTTK 193 Query: 204 LKLTNDRPSEHV-ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 + + + ++ D + P+ + + + ++ T A+ E+ K N Sbjct: 194 FVNESQTKGKRMRMIDDPMLYQPIGVGMKKDEPALTAKINDTLRALDADGEIN---KIWN 250 Query: 263 QVSKDTTNPDVQR 275 + T + R Sbjct: 251 KWLGPDTEYKMTR 263 >gi|171317513|ref|ZP_02906703.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MEX-5] gi|171097342|gb|EDT42187.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MEX-5] Length = 264 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 57/277 (20%), Positives = 102/277 (36%), Gaps = 21/277 (7%) Query: 1 MYKDFFVSILCLIILFFT---SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M +L ++ + + + A +L +K+RG L+ G+ F G+ Sbjct: 1 MKISLLKKLLVAGLIGTSFAAATAHAADLLDQVKQRGTLRVGLEGTFPPFNSKNPQGELV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD +A+++ + K +++ LQ+ + D++S T R+ +L Sbjct: 61 GFDVDIAKAVAAKLG---VKAEFVTTEWSGIIAGLQAGKFDVISNQVGITDKRKETLDF- 116 Query: 118 FRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 P + I K S+ L G + V G T + +A ++K +P Sbjct: 117 -SPAYTYSSAQLIQRKDDTREFKSLEDLKGKKLGVALG-TNYMDMAKSVPGIDVKTYPGA 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 E A R DA D L L + P ++ S +P +G+ Sbjct: 175 ----PEYLRDLAAGRLDAALNDRLMLAYLTKNSQLP--LRPGANVGSANPSGIPFKKGNP 228 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSK-DTTNP 271 ++ + AM E G K ++ D T P Sbjct: 229 KFQKAIDD---AMAQLEADGTFTKISDKWFGIDVTKP 262 >gi|170724142|ref|YP_001751830.1| cystine transporter subunit [Pseudomonas putida W619] gi|169762145|gb|ACA75461.1| extracellular solute-binding protein family 3 [Pseudomonas putida W619] Length = 264 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 53/263 (20%), Positives = 91/263 (34%), Gaps = 15/263 (5%) Query: 3 KDFF-VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K S+ L+ S + L I+++G + G+ F+ NG GF+V Sbjct: 6 KPLLNASLAILLGTGLFSQAFAGEQLKTIQEKGVINVGLEGTYPPFSFQDENGKLAGFEV 65 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 +F L+ + K + P AL+SK++D++ + R+ + P Sbjct: 66 EFSELLAKELG---VKAKIQPTKWDGILAALESKRLDVVVNQVTISEERKKKYDFSE-PY 121 Query: 122 TYFDGQGFIMHKKK---GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 T Q I+ KK I + L+G + V GT E + +E Sbjct: 122 TVSGIQALILKKKAEQLNIKTAQDLAGKKVGVGLGTNYEQWVKQDVPNA----EVRTYED 177 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 A R R DA D L AL+ + + D S+ A+ +G+ E Sbjct: 178 DPSKFADLRNGRIDAILIDR--LAALEYAQKA-KDTELAGDAFSRLESGVALRKGEPELL 234 Query: 239 NIVSWTHYAMVTAEELGITQKNI 261 + + L + Sbjct: 235 AAIDKAIDKLKADGTLAKLSEKY 257 >gi|33601773|ref|NP_889333.1| putative amino acid ABC transporter solute-binding protein [Bordetella bronchiseptica RB50] gi|33576210|emb|CAE33289.1| putative amino acid ABC transporter solute-binding protein [Bordetella bronchiseptica RB50] Length = 263 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 40/257 (15%), Positives = 82/257 (31%), Gaps = 9/257 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTN--ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K V + L + +S + G++ + G Sbjct: 1 MKKITAVLLFSATALLSACGQGDDASSTASAPAASRKVVVGLDDNFPPMGFRDEKNELVG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD+D + S + ++++ P++ + L K++D+L T R+ ++ Sbjct: 61 FDIDMAKEASRRLG---MQVEFKPIDWSAKEAELNGKRVDVLWNGLTITEERKKNISF-- 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + Q I+ I + + L+G + Q G++ + F Sbjct: 116 TAPYMANHQIIIVGSASPIKTKADLAGKVVGAQEGSSAVDAIKKDAPVAASLKEIKTFAD 175 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 A R DA D + L + R ++ +L + + + DTE Sbjct: 176 NVTALMDLAAGRLDAIVVD--EVVGRYLASKREGQYRVLEENFGTEDYGVGVRKDDTELL 233 Query: 239 NIVSWTHYAMVTAEELG 255 + T +M G Sbjct: 234 AKLDKTLASMKEDGTAG 250 >gi|218296357|ref|ZP_03497100.1| extracellular solute-binding protein family 3 [Thermus aquaticus Y51MC23] gi|218243151|gb|EED09682.1| extracellular solute-binding protein family 3 [Thermus aquaticus Y51MC23] Length = 254 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 46/268 (17%), Positives = 93/268 (34%), Gaps = 19/268 (7%) Query: 1 MYKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K F+ IL L + F IKK G ++ G F A GF Sbjct: 1 MRKVLVFLGILALGLAF-----AQVRTFDQIKKSGEIRIGTEGAFPPFNYFDAKNQLTGF 55 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 ++D A++ + P +++ + + L + D + + T R ++ Sbjct: 56 EIDLGNAIAKKLGLKP---KWIAQSFDSLLIQLGQGRFDFVIASHGITEERAKAVDFTN- 111 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 ++ G I+ KK G + L G + VQ GTT +++ Sbjct: 112 --PHYCTGGIIVSKKGGPKTKKDLEGKVVGVQIGTTYMEAAQKIPGVRQ----VRTYQKD 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + A R DA+ D + + + + L +++ + +A A+ +G+ + Sbjct: 166 PDALQDLLAGRVDAWITDR-FVAKEAIKERKLEGTLQLGELVFQERVAMAVAKGNKSVLD 224 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKD 267 ++ ++ K +D Sbjct: 225 ALNKALADLMKDGTYAQISK--KWFGED 250 >gi|303248475|ref|ZP_07334733.1| extracellular solute-binding protein family 3 [Desulfovibrio fructosovorans JJ] gi|302490095|gb|EFL50015.1| extracellular solute-binding protein family 3 [Desulfovibrio fructosovorans JJ] Length = 271 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 54/281 (19%), Positives = 96/281 (34%), Gaps = 28/281 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI----------LGDIKKRGFLKCGINTGLVGFAEV 50 M + + L + L ++ L I +RG L G+ F V Sbjct: 1 MVRFIRIISLAFVALTMCCGPAVSATTPFDIYEGSNLRKIVQRGTLVVGMELKFWPFEYV 60 Query: 51 KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 G+ GFDVD + L+ + K++ + AL + +ID++ TL R Sbjct: 61 DKEGNPVGFDVDIAKTLADRLG---VKLEIKDMEWTGLIPALTAGKIDLIISGISGTLER 117 Query: 111 EISLGLAFRPITYFDG--QGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKA 166 S+ + G + + +V L+ G + V+ GTT +L F Sbjct: 118 AKSITF--TSPYFTTGLCALLSAKRAGDVKNVDALNAPGRVLAVKTGTTADLVATKKFTK 175 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 ++ A R DA+ D ++ K P + + P Sbjct: 176 A----TINRYKDETACVQEVVAGRADAFFYDQISIA--KHHKQNPEATKAILKPFTYEPF 229 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 A+ +GD +W+ W + T + G ++ KD Sbjct: 230 CIALQKGDFDWWQ---WLEMYLTTIKADGTLDALHDKYFKD 267 >gi|307308380|ref|ZP_07588085.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti BL225C] gi|306901181|gb|EFN31788.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti BL225C] Length = 281 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 50/276 (18%), Positives = 96/276 (34%), Gaps = 15/276 (5%) Query: 3 KDFFVSILCLIILFFTSFS--TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + +S + ++L T+F+ A +IK +G G+ + + NG GFD Sbjct: 10 RSRALSAITAVLLAATAFATGAEAVTPEEIKAKGTAVIGVQMDQFPWGFIDQNGQNDGFD 69 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ + ++ + + +++ + + R L + +D L + T R + Sbjct: 70 IEIAKLIAQELGVE---VKFERITGQNRIPLLVNGNVDFLVPSMTVTEERAKVIQYVIPY 126 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + + K I L I V G+ E L KA F+ Sbjct: 127 SS--NDITVWAKKDAEIKGNEDLGKYVIGVNRGSVFEPVL---VKAAPPSTEIKRFDDDA 181 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A + + DA G S Y L + R S ++ + A+ +GD E N Sbjct: 182 TTVQALLSGQVDAILG--SVTYGLVIKETRHSAEYERKYKVADNFQGMAVRKGDQEMLNF 239 Query: 241 VSWTHYAMVTAEELGITQKN---INQVSKDTTNPDV 273 ++ L K +++ TT P + Sbjct: 240 LTDFVTRHTADGSLDALYKKWIGVDRAELPTTLPGI 275 >gi|224368338|ref|YP_002602501.1| ABC-type histidine transport system, periplasmic histidine-binding protein (HBP) precursor [Desulfobacterium autotrophicum HRM2] gi|223691054|gb|ACN14337.1| ABC-type histidine transport system, periplasmic histidine-binding protein (HBP) precursor [Desulfobacterium autotrophicum HRM2] Length = 259 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 48/260 (18%), Positives = 87/260 (33%), Gaps = 22/260 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K FVSI+ L+ + S ++ G F + +G +GFD Sbjct: 1 MKKTLFVSIVLLVAMVAGSAFAGNIT--------KVRMGTEGAYPPFNFIDKDGKLQGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL A + +++ + L +K+ D + + T R + + Sbjct: 53 VDIAKALCVAAGVEC---EFVMQDWDGMIPGLLAKKFDTIIASMSITQERLQKVNFTKK- 108 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y FI K + L G ++ VQ GT E + D F + + Sbjct: 109 -YYLTPAKFIAKKGSNFEITPEGLKGKTVGVQRGTIHENFVRDKF---GKTMNIKSYATQ 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234 +E + + R D D L L + + + + AI + D Sbjct: 165 DEANMDLASGRVDLVIADTVVLSDGFLNKKEGKDFEFVGPGFTDKKWFGEGIGIAIRKED 224 Query: 235 TEWYNIVSWTHYAMVTAEEL 254 E ++++ + E Sbjct: 225 KELLDLMNKAIDTIRANGEY 244 >gi|257488015|ref|ZP_05642056.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|330891101|gb|EGH23762.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. mori str. 301020] gi|331008689|gb|EGH88745.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 266 Score = 140 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 48/253 (18%), Positives = 89/253 (35%), Gaps = 11/253 (4%) Query: 11 CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSS 69 L L +S + + L I++R L G+ F + KG +V+ + Sbjct: 4 VLASLTVSSAALADATLDRIQERHRLVVGVLLSGGPFGSIDPQTRKPKGVNVELAEDIGK 63 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 + D ++ + + R LQ ++D+L N +WT R LG + Y G Sbjct: 64 RLGVD---VELVSVLTANRVQFLQQGKVDLLIANMEWTPERGQLLG-SVPTPFYRVGGTA 119 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 + K I+ L G +C G++ L ++ F+ E A R + Sbjct: 120 AVLKDSKITRWEDLKGQPVCTSQGSSYIKALTEF------GADIKAFKSSSESLLALRGN 173 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 C A D + + L ND + + ++ +P G+ + + Sbjct: 174 NCVAAVHDATLVNPLLAGNDEWKGYRAITPELNPAPSVIWTRSGEADTQKRLDSIVQEWH 233 Query: 250 TAEELGITQKNIN 262 + L +K N Sbjct: 234 RSGWLIELEKRYN 246 >gi|302338914|ref|YP_003804120.1| extracellular solute-binding protein family 3 [Spirochaeta smaragdinae DSM 11293] gi|301636099|gb|ADK81526.1| extracellular solute-binding protein family 3 [Spirochaeta smaragdinae DSM 11293] Length = 283 Score = 140 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 52/264 (19%), Positives = 104/264 (39%), Gaps = 33/264 (12%) Query: 1 MYKD----FFVSILCLIILFFTSFST--------------NASILGDIKKRGFLKCGINT 42 M K + +++ FFT+ N ++ +I +RG LK G++T Sbjct: 1 MKKSRSYVLMLIWFVVLLSFFTACGAPPKEENTAENESQRNGGLIDEISRRGVLKVGMST 60 Query: 43 GLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102 V +A NG GF++D + L+ + D ++++P AL + + D++ Sbjct: 61 -FVPWAMNDKNGQLIGFEIDVAKRLAKDLGVD---VEFVPTKWSGIIPALLTGKFDVIIG 116 Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQA--GTTTEL 158 E SL + F + G + +K G S+ + + V A GTT Sbjct: 117 GMGI--RPERSLKVNFTIPYDYSGMAIVANKETAPGYGSLEEFDNPDVTVVARIGTTAAD 174 Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218 Y N+K +F+ + + R A + L A + + + ++ +P Sbjct: 175 AAKKYMPNANIK----LFDDEAQALQELKTGRAHAMVA-SAPLPAFQAIENSDTLYLPIP 229 Query: 219 DIISKSPLAPAIIQGDTEWYNIVS 242 ++ P+ AI + + + N+ + Sbjct: 230 GTFTREPIGFAIRKREADALNVFN 253 >gi|289671688|ref|ZP_06492578.1| glutamine ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. syringae FF5] gi|330982576|gb|EGH80679.1| glutamine ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 277 Score = 140 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 41/242 (16%), Positives = 88/242 (36%), Gaps = 13/242 (5%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKI 78 + +A L D+ + L CG+ + F+ + G DVD C+AL+ + + + Sbjct: 18 SAVHADQLSDVMSKKSLSCGVYADVPPFSAPDPQTRELVGMDVDLCKALAKHMGVE---L 74 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + PL+ + R ++ ++D++ N +T R + Y + ++ Sbjct: 75 ELKPLSVEARIPEVKMGRVDVIFANLAYTKSRAEQIQF--SDPYYIAKETLVVRAANADQ 132 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 S G I G+T+E ++ P+ F+ A + ++ + Sbjct: 133 PKSFFKGKRISSTKGSTSEQSIR------LADATPVTFQDTGSAYMALQQNKVVGLVTNT 186 Query: 199 SALYALKLTNDRPS-EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 L E I + ++ P+ + QG+ + V+ + M A E+ Sbjct: 187 MTAIKLVGQAKAGGVELAIAKEPMALEPIGAGMRQGEPAFLAKVNESLREMEAAGEIDAI 246 Query: 258 QK 259 Sbjct: 247 WA 248 >gi|295689321|ref|YP_003593014.1| extracellular solute-binding protein family 3 [Caulobacter segnis ATCC 21756] gi|295431224|gb|ADG10396.1| extracellular solute-binding protein family 3 [Caulobacter segnis ATCC 21756] Length = 261 Score = 140 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 53/260 (20%), Positives = 94/260 (36%), Gaps = 14/260 (5%) Query: 3 KDFFVSILCLIILFFTSFSTNASI--LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + +S L L +L ++ + IK G L+ G+ F A+G GF+ Sbjct: 6 RRAVISGLGLALLAACGKKPDSDVSGWDRIKASGTLRIGLEGTYPPFNFQGADGQLTGFE 65 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDF +AL++ + P ++ P AL+S ++D++ T R+ + P Sbjct: 66 VDFAKALAAQLGLKP---EFRPAPFAGLLGALESGRVDVVINQITITPDRKDKYDFSE-P 121 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 T Q + K G S+ +L+G + V GT E L + ++ Sbjct: 122 YTISGIQIITLKAKPGPSNPDELAGKKVGVGLGTNYEQWLRANVPTAD----VRTYDDDP 177 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +A R DA D T+ E V + A+ + D I Sbjct: 178 TKYQDLKAGRIDAVLNDRLVAADFVKTSP---EFVASGPPFAAQGAGVAMKK-DAALKVI 233 Query: 241 VSWTHYAMVTAEELGITQKN 260 + A+ + +L + Sbjct: 234 IDQAIDALRASGKLSAMSQQ 253 >gi|260888234|ref|ZP_05899497.1| putative cysteine ABC transporter, periplasmic cysteine-binding protein [Selenomonas sputigena ATCC 35185] gi|260862068|gb|EEX76568.1| putative cysteine ABC transporter, periplasmic cysteine-binding protein [Selenomonas sputigena ATCC 35185] Length = 285 Score = 140 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 47/269 (17%), Positives = 88/269 (32%), Gaps = 15/269 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59 M K ++ L F S + L+ G N F NG ++GF Sbjct: 29 MKKMLLGAVGLLAAASFAVAGCGGSGDSGSASK-TLRVGTNADFAPFEFQGENGKEYEGF 87 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D RA++ + +N AL SK IDI R+ ++ + Sbjct: 88 DMDLARAVAEEMGMTAD---IQNINFDGLIPALVSKNIDIAISGMTINDERKKNVLFSE- 143 Query: 120 PITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y G ++ K I+ L+G ++ VQ GTT+ + N Sbjct: 144 -PYYQSGLTIVVKKDNTDINGFKDLAGKTVAVQIGTTSAKEV-----KKNPDIQVKELNS 197 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + +A A D + + ++ ++++ A+ + + E Sbjct: 198 SADTFLELKAGGVQAVVNDRPVNDYYIAKSGE-KDVRVVNELLTSEDYGIAMAKDNQELQ 256 Query: 239 NIVSWTHYAMVTAEELG-ITQKNINQVSK 266 V + + I +K Q ++ Sbjct: 257 KKVDEALKKLKENGKYDEIYKKWFGQKAE 285 >gi|315039013|ref|YP_004032581.1| amino acid ABC transporter [Lactobacillus amylovorus GRL 1112] gi|325957438|ref|YP_004292850.1| amino acid ABC transporter [Lactobacillus acidophilus 30SC] gi|312277146|gb|ADQ59786.1| amino acid ABC transporter [Lactobacillus amylovorus GRL 1112] gi|325334003|gb|ADZ07911.1| amino acid ABC transporter [Lactobacillus acidophilus 30SC] gi|327184146|gb|AEA32593.1| amino acid ABC transporter [Lactobacillus amylovorus GRL 1118] Length = 272 Score = 140 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 97/279 (34%), Gaps = 20/279 (7%) Query: 1 MYKDFFVSILCLIILFFTSF------STNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M K + +L ++L T + I ++ + G++ V K NG Sbjct: 1 MKKRWIFVLLATLMLVLTGCESVQERANTQDTWSKIAQKNQVVVGLDDSFVPMGFEKKNG 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G+D+D +A+ + + ++ L++ ID+L T R+ + Sbjct: 61 QLTGYDIDLAKAVFKQYG---IHVSFQTIDWSMNVTELRNGTIDLLWNGYSITPERKKKV 117 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN--MKYH 172 + + Q ++ K GI+S Q+ + +Q G+T E Y N Sbjct: 118 AFSR--PYLRNRQVLVVKKDSGINSFKQMKKYELGMQTGSTAEQW---YETKQNVLHAKK 172 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP-DIISKSPLAPAII 231 ++++ + A R D + ++ ++ D + K A + Sbjct: 173 TVLYDTISNSFLDLNAGRIQGILLDEVYANYYIAHMTKSKDYKVIQNDNVPKDLFAVGMR 232 Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 +GD V+ +V ++ G K + +N Sbjct: 233 KGDKTLRKKVN---AGLVRLQKNGTLAKLNKKWFGKESN 268 >gi|21228041|ref|NP_633963.1| glutamine-binding protein [Methanosarcina mazei Go1] gi|20906474|gb|AAM31635.1| Glutamine-binding protein [Methanosarcina mazei Go1] Length = 284 Score = 140 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 52/289 (17%), Positives = 94/289 (32%), Gaps = 30/289 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASIL-----------------GDIKKRG----FLKCG 39 M K + + ++F + ++ G G Sbjct: 4 MLKIMAMLFVIATVVFAAGCAEQGGEETVEEAAEESAPVEETASAEVNASGEEMPTYIVG 63 Query: 40 INTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99 F V + G GFDVD A++ K+QYL + ALQ+ IDI Sbjct: 64 TEAQFPPFEIVDSRGKVVGFDVDLLNAIAED---QGFKVQYLDQDFAGLIPALQTGNIDI 120 Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTEL 158 ++ T RE + + G + + I SV+ L G ++ VQ G+T + Sbjct: 121 IASGMTITEEREQEVDFSE--PYITAGLALAVPINNEEIQSVADLQGKTVAVQTGSTGFM 178 Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218 + K + F V E + D D+ A P I+ Sbjct: 179 KAEE-LKEAGVIAEIKDFPHVNEAIEELKIGGADVMINDLPVTEAFIAAQ--PDVIKIVG 235 Query: 219 DIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 + ++ A+ G+TE ++ + + E N+ + ++ Sbjct: 236 EPLNSESYGFAVRTGNTELLQKINTGLENVKASGEYDELLTNLPKYMEE 284 >gi|315613066|ref|ZP_07887977.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis ATCC 49296] gi|315315176|gb|EFU63217.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis ATCC 49296] Length = 279 Score = 140 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 101/280 (36%), Gaps = 17/280 (6%) Query: 1 MYKDFFVSILCLIILFF-TSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M + +L L FF T+ + A +K+G + G + V + NG Sbjct: 1 MKRKKIALVLALFFSFFLTACTQKASDPNQDNWAKYQKQGSITIGFDNTFVPMGFEEKNG 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + GFD+D +A+S + +I++ P++ + LQ+ ID + T R+ + Sbjct: 61 QYAGFDIDLAQAVSEKLG---IQIKFQPIDWDMKETELQNGTIDAIWNGYTATDERKEKV 117 Query: 115 GLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMK 170 I Y + Q ++ KK I S+ ++ + QAG++ L + K Sbjct: 118 AFT---IPYMENQQVLVSKKSQNIHSIQDMTDKVLGAQAGSSGYLNFEGQPELLKNRVKD 174 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 ++ E + R DA D + +++ + A + Sbjct: 175 QKANQYQSFNEALIDLKNDRIDALLIDRVYANYYLQSEGILNDYNVFSAGFESEAFAVGV 234 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELG-ITQKNINQVSKDTT 269 D + ++ ++ + I+QK + + Sbjct: 235 RPADKTLLDSLNQAFISLYQEGKFQEISQKWFGEDVATSQ 274 >gi|291561845|emb|CBL40645.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [butyrate-producing bacterium SS3/4] Length = 286 Score = 140 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 42/232 (18%), Positives = 81/232 (34%), Gaps = 11/232 (4%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 L G + V NG++ GFD+D + ++S + + + P+ + + L+S Sbjct: 59 LIVGFDQDFPPMGFVGDNGEYTGFDLDLAKEVASRLG---LEYKAQPVAWDSKDMELESG 115 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 ID + T + + Q F++ I S + L+G + VQA ++ Sbjct: 116 NIDCIWNGFTIT---GREDDYTWTTPYMANKQVFVVANDSDIKSQADLAGKVVEVQADSS 172 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215 E L + N + DA D + ++ ++ Sbjct: 173 AEAALKENQDLANTFGQLLTTPDYNTAFMDLEQGAVDAVAMD-VIVAGYQIKQRN-ADFK 230 Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 IL D +S+ +G+TE + V M G K ++ + Sbjct: 231 ILDDSLSEEEYGVGFKKGNTELRDKVQGALEEMAA---DGTLAKIADEWFGE 279 >gi|34498540|ref|NP_902755.1| arginine/ornithine ABC transporter substrate-binding protein [Chromobacterium violaceum ATCC 12472] gi|34104396|gb|AAQ60754.1| arginine/ornithine transport system substrate-binding protein (ABC superfamily) [Chromobacterium violaceum ATCC 12472] Length = 254 Score = 140 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 46/266 (17%), Positives = 91/266 (34%), Gaps = 25/266 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K S + S S A L + G++ F++ A+G +GFD Sbjct: 1 MKKALIAS---AGLALLASLSAQAETL---------RVGVDLNYPPFSKQGADGKPQGFD 48 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL +A+ Q +P + AL + + D++ + T R+ ++ + + Sbjct: 49 IDIANALCAAM---KVTCQIVPQDWDGLIPALNANKFDVIISSMQITPERQKAVDFSHK- 104 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y++ ++ K + L G I V +T E DY+ + P + + Sbjct: 105 --YYNIASRMVAKDGTKVDAASLKGKKIGVLRASTQEKFAKDYWGKNGATVVP--YAKSP 160 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235 E ++ R DA D + L + + + S A+ +G+ Sbjct: 161 ESFLDLKSGRVDAVFVDSAVGEQEFLKTTQAKGYSFVGPNYSDVKYFGPGCGIAVKKGNK 220 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNI 261 ++ + Q Sbjct: 221 ALVERLNKGIDQIRKDGSYKKVQDKY 246 >gi|219670552|ref|YP_002460987.1| extracellular solute-binding protein family 3 [Desulfitobacterium hafniense DCB-2] gi|219540812|gb|ACL22551.1| extracellular solute-binding protein family 3 [Desulfitobacterium hafniense DCB-2] Length = 274 Score = 140 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 46/283 (16%), Positives = 95/283 (33%), Gaps = 22/283 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF-------------LKCGINTGLVGF 47 M K V++ L+ + ++S GD + G + G++ Sbjct: 1 MKKWVAVAMTVLMSGLLLAGCGSSSSAGDANEPGKANTEPEKGAVQQKIVIGLDDTFAPM 60 Query: 48 AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 G+ GFDVD + ++S + ++++ P++ + + L SK+ID++ T Sbjct: 61 GFRDDGGNLVGFDVDMAKEVASRL---DMEVEFKPIDWNSKEVELNSKKIDMIWNGLTIT 117 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 R + + Q ++ I + + L+G + Q G+++ L + Sbjct: 118 KERLEKIAF--SKPYMANRQIVVVLSGSDIKTKADLAGKVVGTQEGSSSVDALNAEPEVT 175 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 + + R +A GD L N +P + D + Sbjct: 176 GTFKELRTYADFVAVLNELSIGRVEAVVGDEVVLKYYM--NKKPGTFAAIEDNFGEEEYG 233 Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 + + DTE + AM + K +D Sbjct: 234 VGLRKDDTELLGKLQGALDAMKADGKSAEISK--KWFGEDIVK 274 >gi|237729706|ref|ZP_04560187.1| extracellular solute-binding protein [Citrobacter sp. 30_2] gi|226908312|gb|EEH94230.1| extracellular solute-binding protein [Citrobacter sp. 30_2] Length = 306 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 47/257 (18%), Positives = 90/257 (35%), Gaps = 11/257 (4%) Query: 3 KDFFVSILCLIILFFTSF---STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 K + L + T NA+ L I+ L G L F+ NG G+ Sbjct: 22 KRTAQWLFLLAGIGITPALMAQQNAATLDHIQSSSVLNVGYRQ-LPPFSFTDHNGKVTGY 80 Query: 60 DVDFCRALSSA----IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + C ++ + + + Y+P+N ERF AL S++ID+ R S+ Sbjct: 81 TIAVCNMIADKLRQYLKLNNLTVHYIPVNFAERFSALNSRKIDMDCGVNTNAPERTASVS 140 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + Y I +K I S+S L G ++ + + L + ++ I Sbjct: 141 FSEN--YYTAKMRIISLRKNNIRSISDLKGRTVSLTGSSKDLLEFNKANREQHLNISTIT 198 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS-PLAPAIIQGD 234 ++ + A+ D + L +++P + + I A + + D Sbjct: 199 STTIKGAFEKMAHNESAAFFIDDILAWPLINHSEQPELFSVSSESIGNDMHYAIMMRKND 258 Query: 235 TEWYNIVSWTHYAMVTA 251 ++ V T + Sbjct: 259 QQFVTFVDSTLKDFFAS 275 >gi|294102162|ref|YP_003554020.1| extracellular solute-binding protein family 3 [Aminobacterium colombiense DSM 12261] gi|293617142|gb|ADE57296.1| extracellular solute-binding protein family 3 [Aminobacterium colombiense DSM 12261] Length = 256 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 44/269 (16%), Positives = 97/269 (36%), Gaps = 23/269 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + ++L + G + ++ + G + F G GFD Sbjct: 1 MKKSVVLVMFFALLLGVVGGPAFGA--GSVMEKDTVIIGTSGSYPPFEFHDKTGALVGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + + K +++ + +L + +ID+++ T R S +AF Sbjct: 59 IDLANEVVARLGK---KAEWVDMAFDGVIPSLLTGKIDMIAACLSITEER--SKKVAFST 113 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 F+++K G ++++ L G ++ VQ GTT ++ +++ F ++ Sbjct: 114 PYMVSLSAFVLNKDSGEMATLEDLKGKTVAVQLGTTQDVYISEV-----EGVTVKQFPKL 168 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS----PLAPAIIQGDT 235 + R DA D + + + + L + A A+ Q D Sbjct: 169 NDAVREVTLKRADASLMDETVAETYINSEEFKGQ---LKKSFTVELKGAKQALAVSQNDP 225 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQV 264 + V+ V +E G + + Sbjct: 226 AFLEAVNKIV---VQLQEEGFISELHKKW 251 >gi|330954118|gb|EGH54378.1| glutamine ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae Cit 7] Length = 277 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 42/239 (17%), Positives = 88/239 (36%), Gaps = 13/239 (5%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQYL 81 +A L D+ + L CG+ + F+ + G DVD C+AL+ + + ++ Sbjct: 21 HADQLSDVMSKKSLSCGVYADVPPFSAPDPQTRELVGMDVDLCKALAKHMGVE---LELK 77 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 PL+ + R ++ ++D++ N +T R + Y + ++ S Sbjct: 78 PLSVEARIPEVKMGRVDVIFANLAYTKSRADQIQF--SDPYYIAKETLVVRAANADQPKS 135 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 G I G+T+E ++ P+ F+ A + ++ + Sbjct: 136 CFKGKRISSTKGSTSEQSIR------LADATPVTFQDTGSAYMALQQNKVVGLVTNTMTA 189 Query: 202 YALKLTNDRPS-EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L E I + ++ P+ + QG+ + V+ + AM A E+ Sbjct: 190 IKLVGQAKAGGVELAIAKEPMALEPIGAGMRQGEPAFLAKVNESLRAMEAAGEIDAIWA 248 >gi|308187257|ref|YP_003931388.1| ABC transport system, periplasmic protein precursor [Pantoea vagans C9-1] gi|308057767|gb|ADO09939.1| Putative ABC transport system, periplasmic protein precursor [Pantoea vagans C9-1] Length = 266 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 53/271 (19%), Positives = 95/271 (35%), Gaps = 15/271 (5%) Query: 3 KDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + ++ + ++ + T A+ +L IK+RG L G+ F+ G GF+ Sbjct: 8 RQMVMGVMAVALIAGVNVKTFAAENLLNKIKERGTLLVGLEGTYPPFSFQDEKGKLTGFE 67 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F L+ + K P +L +K+ID++ + R+ + P Sbjct: 68 VEFAEQLAQHMG---VKASLKPTKWDGMLASLDAKRIDVVINQVTISDERKKKYDFS-TP 123 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 T Q M G I+ + L+G + V GT E L + K ++ Sbjct: 124 YTVSGIQALTMKANAGTITKPADLAGKKVGVGLGTNYEQWLRENVK----GVDIRTYDDD 179 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 R+ R +A D L AL L + D S+ A+ +G+ + Sbjct: 180 PTKYQDLRSGRLNAILVDR--LAALDLVKKTGDTMAVAGDAFSRQESGVAVRKGNDDLLK 237 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 + M L + D T Sbjct: 238 AIDQAIADMQKDGSLSKLSQ--KWFGADVTK 266 >gi|303240910|ref|ZP_07327421.1| extracellular solute-binding protein family 3 [Acetivibrio cellulolyticus CD2] gi|302591496|gb|EFL61233.1| extracellular solute-binding protein family 3 [Acetivibrio cellulolyticus CD2] Length = 275 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 37/249 (14%), Positives = 86/249 (34%), Gaps = 10/249 (4%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 S S +K+ G L G++ N + G+D+D + ++S + + Sbjct: 29 ASSSVADQSWEKVKEAGVLVLGLDDSFPPMGYRDDNNEIVGYDIDLAKEVASRLGVE--- 85 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++ P+N + L + ID + T ++ L F + Q ++ Sbjct: 86 LKLQPINWDSKEQELNTGNIDCVWNGFTMTD--DLKKNLLFSDAYMNNQQVLVVMADSKY 143 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 +S + L+G S+ +Q+ ++ ++ L I + DA D Sbjct: 144 NSEADLAGKSVALQSDSSAKVALDSKTDFKASLKEVIELDNYTTCLMDLEKGGVDAVVMD 203 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 + A + S++ ++ + ++ + D ++ T M + G Sbjct: 204 --EIVARYFIQMKGSKYKVIGNSLAAEEYGIGFRKADVALKTKINDTLKEMA---KDGTN 258 Query: 258 QKNINQVSK 266 K ++ Sbjct: 259 AKISDKWFG 267 >gi|239833266|ref|ZP_04681594.1| Histidine-binding protein precursor [Ochrobactrum intermedium LMG 3301] gi|239821329|gb|EEQ92898.1| Histidine-binding protein precursor [Ochrobactrum intermedium LMG 3301] Length = 270 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 43/260 (16%), Positives = 86/260 (33%), Gaps = 10/260 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F V + +L A DI ++ + + + AN G D Sbjct: 6 MLKRFLVLSIVGAMLTAQGVPAMADTYADIIAAKKIRVSTDLAIPPSGMLDANLKPVGSD 65 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ + L+ + ++++ R LQ+ + DI+ T R + + Sbjct: 66 VETAQLLAKDWGVE---LEFIQTTGATRIPNLQTNKADIVISTLSVTPERAQVIDFSKPY 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 K I+ + L G S+ V GTT + L H + ++ Sbjct: 123 AGLVSV--IAAPAKSPINDWADLKGQSVTVTRGTTQDSELTKLAGEHG--FTVTRYDDDA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A + + A + + ++ + P+ I LA + + + E + Sbjct: 179 TMVTAAVSGQAKAIATSATLV--KQIHDKNPTLAFEPKITIRVLNLAIGVNKNEPELLSK 236 Query: 241 VS-WTHYAMVTAEELGITQK 259 + W + + I QK Sbjct: 237 LDEWVVANLQNGKLNEIYQK 256 >gi|113868715|ref|YP_727204.1| ABC transporter periplasmic protein [Ralstonia eutropha H16] gi|113527491|emb|CAJ93836.1| ABC-type transporter, periplasmic component: PAAT family [Ralstonia eutropha H16] Length = 264 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 42/238 (17%), Positives = 93/238 (39%), Gaps = 9/238 (3%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 +A L IK+R + ++ + + G D++ R L+ + D ++ +P Sbjct: 23 SADTLDTIKQRKKILVAVDISAPPYGMLDTQARQSGSDIETARLLAKDLGVD---LEIVP 79 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + R L +++ D++ + T R+ + + K + S + Sbjct: 80 VTGPNRVPFLLTRKADVVLASFSVTDARKKVIDFSE--PYGVIPVVVGGPTKAQVKSFAD 137 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 LSG ++ V GTT++ L+ KA + + +E + A + D IS + Sbjct: 138 LSGKTVAVTRGTTSDQELSRGAKA-VAAVNIVRYEDDATTNTAVSTGQQDYLAAAISVIP 196 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS-WTHYAMVTAEELGITQK 259 ++ + PS + + ++ P A + +GDT + + W + I ++ Sbjct: 197 EVRRS--NPSRDLEIKFVMQTFPYAIGLRKGDTALKDWLDGWVRTNLKNGRINDIYKR 252 >gi|297563321|ref|YP_003682295.1| extracellular solute-binding protein family 3 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296847769|gb|ADH69789.1| extracellular solute-binding protein family 3 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 281 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 38/259 (14%), Positives = 81/259 (31%), Gaps = 15/259 (5%) Query: 19 SFSTNASIL---GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 +++L + L G+ T +G GFDVD ++ + Sbjct: 20 GLPACSAVLGEEESLLDADTLTVGVKTDQPNLGLEDGSGGITGFDVDVAFYIADRLGFAA 79 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-K 134 ++ + + +R L S ++D++ T R+ + Y Q ++ Sbjct: 80 EDVEVTGVTSADREEKLISGEVDMVVATYSITPARKTQVTF--GGPYYVAKQDVLVRAED 137 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 + V L S+C G+ + + +++ + A RA DA Sbjct: 138 TDVRGVRDLEDRSVCQGEGSYSAVRISE---GLGIGIEQREAPSYSACIDALRAGEVDAV 194 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 + D L + P + + + + GD V+ M + Sbjct: 195 STDNLILAGFLA--EEPDAFRFVNNPFTDEKYGVGLPHGDVRACEAVNRAISQMY---QD 249 Query: 255 GITQKNINQVSKDTTNPDV 273 G ++ + NP + Sbjct: 250 GTAEELLEHWFGGI-NPQL 267 >gi|251782499|ref|YP_002996801.1| amino acid ABC transporter extracellular-binding protein [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242391128|dbj|BAH81587.1| amino acid ABC transporter extracellular-binding protein precursor [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 280 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 43/279 (15%), Positives = 91/279 (32%), Gaps = 15/279 (5%) Query: 1 MYKDFFVSILCLIILFFTSFST------NASILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M + + L I L + T + +K + G + V +G Sbjct: 4 MRRSIRIVFLAAISLLLVACGTANKTAKSGDAWKTYQKEKTITLGFDNTFVPMGYKDESG 63 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 D KGFD+D +A+ + + +N + L++ +ID++ T R+ + Sbjct: 64 DNKGFDIDLAKAVFKQYG---ITVNFQAINWDLKEAELKNGKIDMIWNGYSMTKERQAKV 120 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + Q ++ K GI+ S + + Q+G++ L + K Sbjct: 121 AFTI--PYMKNEQVIVVKKSSGITDTSDMKNKVLGAQSGSSGYDALTRHHKVLKDLVKDQ 178 Query: 175 ---VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 +E + + +R D D ++ ++ ++ A + Sbjct: 179 DATQYETFTQAFIDLKTNRIDGLLIDKVYANYYLKQENQLDDYQLVSTGFDNEQFAVGLR 238 Query: 232 QGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSKDTT 269 + D ++ M E I+QK + T Sbjct: 239 KEDKTLQKKINEALKKMYQDGEFQAISQKWFGEDVATTQ 277 >gi|241204562|ref|YP_002975658.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858452|gb|ACS56119.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 262 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 55/242 (22%), Positives = 90/242 (37%), Gaps = 14/242 (5%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 L DI KRG L+ + T F+ V A G+ G V+ ++ + KI +L + Sbjct: 23 GTLDDIAKRGELRVAVQTQGPPFSLVDAAGERTGSSVELAELMAKEMG---VKITFLDFD 79 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-- 142 AL S + D+L + TL R + +AF + G ++ Sbjct: 80 WDGLIPALLSGKADLLVADMTPTLAR--GMKVAFTKPYMYTGSTVFTKAGGKFNTTGDCK 137 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 G I V G T E F +K + + A + D D+SA+ Sbjct: 138 AKGTKIAVLLGATGEKEAKAAFPDAEIKSYKGGG---PLLLDAVNNGQADCGVNDVSAVK 194 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 I+PD++SK PLA A + +++ W + + G QKN++ Sbjct: 195 GQSTAYPA-GSFTIMPDMLSKEPLAFATRYDEP---DLLIWMNQFLDQVTLDGRLQKNLD 250 Query: 263 QV 264 Sbjct: 251 YW 252 >gi|258404610|ref|YP_003197352.1| extracellular solute-binding protein family 3 [Desulfohalobium retbaense DSM 5692] gi|257796837|gb|ACV67774.1| extracellular solute-binding protein family 3 [Desulfohalobium retbaense DSM 5692] Length = 278 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 47/258 (18%), Positives = 92/258 (35%), Gaps = 25/258 (9%) Query: 2 YKDFFVSILCLIILFFTSFSTN----------ASILGDIKKRGFLKCGINTGLVGFAEVK 51 K V I C++ + + AS L I+KRG L+ G +T +A Sbjct: 4 RKLLAVMIGCVMAVALLGTAAQSADVREALSQASALEQIQKRGNLRVGFST-FKPWAMKN 62 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G++ GF++D +AL++ + +P +++P AL + + DI+ R Sbjct: 63 KKGEFIGFEIDVAKALAADMGVEP---EFVPTKWSGIIPALLTGKFDIIIGGMGIRPQRN 119 Query: 112 ISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGA--SICVQAGTTTELTLADYFKAH 167 + + G + HK G S+ + +I + GTT + Sbjct: 120 LKVNF--SVPYDHSGMSIVAHKSVAPGYESLEDFNKPSVTIAARIGTTAAQAAKTHMPEA 177 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 +F+ + R A + + + + + P+ Sbjct: 178 ----TIRLFDDEAQALQELLTQRAHAMVASQPLPEQQAILHKERLYLPLDGETFTTEPIG 233 Query: 228 PAIIQGDTEWYNIV-SWT 244 AI +GD ++ N + +W Sbjct: 234 FAIRKGDIDFLNFLNNWV 251 >gi|330430186|gb|AEC21520.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pusillimonas sp. T7-7] Length = 270 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 40/257 (15%), Positives = 81/257 (31%), Gaps = 15/257 (5%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDF 63 + + + + A ++ +K+RG L G+ F V G+ GFD+D Sbjct: 11 LVAGVTAVSAFTASGIAHAADLIDTVKERGTLIVGVEGTYPPFNYVDTKTGELDGFDIDV 70 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 + ++ + K+Q++ L S + D++ T R+ + + + Sbjct: 71 AKLIADKLG---VKVQFVKTEWSAILAGLTSGKFDVIVNQVGITPGRQQTFDFSVPYVAS 127 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 + G +S + L G + V G+ E + E Sbjct: 128 SPQLILRKNDDAGYTSFADLKGKKLGVSQGSNYEA-----LAKSQEGVDVKSYPGAPEYL 182 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL--APAIIQGDTEWYNIV 241 + + R DA D L T++ P I I P +G+ + + Sbjct: 183 SDLISKRVDAALNDQLMTAYLVKTSNIP----IKGGAIVGEPKFNGIPFRKGNPGFEAAL 238 Query: 242 SWTHYAMVTAEELGITQ 258 + + E Sbjct: 239 NKALQDSFDSGEFAKIS 255 >gi|323127385|gb|ADX24682.1| amino acid ABC transporter, extracellular amino acid-binding protein [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 279 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 43/279 (15%), Positives = 91/279 (32%), Gaps = 15/279 (5%) Query: 1 MYKDFFVSILCLIILFFTSFST------NASILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M + + L I L + T + +K + G + V +G Sbjct: 3 MRRSIRIVFLAAISLLLVACGTANKTAKSGDAWKTYQKEKTITLGFDNTFVPMGYKDESG 62 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 D KGFD+D +A+ + + +N + L++ +ID++ T R+ + Sbjct: 63 DNKGFDIDLAKAVFKQYG---ITVNFQAINWDLKEAELKNGKIDMIWNGYSMTKERQAKV 119 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + Q ++ K GI+ S + + Q+G++ L + K Sbjct: 120 AFTI--PYMKNEQVIVVKKSSGITDTSDMKNKVLGAQSGSSGYDALTRHHKVLKDLVKDQ 177 Query: 175 ---VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 +E + + +R D D ++ ++ ++ A + Sbjct: 178 DATQYETFTQAFIDLKTNRIDGLLIDKVYANYYLKQENQLDDYQLVSTGFDNEQFAVGLR 237 Query: 232 QGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSKDTT 269 + D ++ M E I+QK + T Sbjct: 238 KEDKTLQKKINEALKKMYQDGEFQAISQKWFGEDVATTQ 276 >gi|296127371|ref|YP_003634623.1| extracellular solute-binding protein family 3 [Brachyspira murdochii DSM 12563] gi|296019187|gb|ADG72424.1| extracellular solute-binding protein family 3 [Brachyspira murdochii DSM 12563] Length = 275 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 94/280 (33%), Gaps = 27/280 (9%) Query: 1 MYKDFFVSILCLIILFFTSF-------------STNASILGDIKKRGFLKCGINTGLVGF 47 M + +L + + ST + L +K G L G++ Sbjct: 1 MKRILTFLLLAFFAVIISCNNNSGSANNNAAPESTEDNSLQKVKDAGKLVLGLDDTFAPM 60 Query: 48 AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 NG+ GFD+D + ++S + + ++ P+ L+L +D+L Sbjct: 61 GFRDENGEVVGFDIDLAKEVASRLGVE---LEIKPIEWSSSILSLNKGDVDVLWNGVTIN 117 Query: 108 LLREISLGLAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYFK 165 R+ + + Y + + I+ I+S LSG + VQ G+ E AD Sbjct: 118 DARKQQINFSK---PYLNNRLVIVKAIDDAAINSKDDLSGKVLGVQVGSNDEALTAD--P 172 Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKS 224 + ++ +A R DA D A P V++ + +++ Sbjct: 173 SSKDAKEIRRYDVNVNAFLDLQAKRIDAVIIDEVAAQYYISEKKAP--FVVVDNSPLTEE 230 Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQKNINQ 263 + D + V M + I+QK + Sbjct: 231 LYGVGFRKSDEKLLAEVDRILDEMKADGKAAEISQKWFAK 270 >gi|172035229|ref|YP_001801730.1| solute-binding family protein 3 [Cyanothece sp. ATCC 51142] gi|171696683|gb|ACB49664.1| putative extracellular solute-binding protein, family 3 [Cyanothece sp. ATCC 51142] Length = 315 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 43/251 (17%), Positives = 94/251 (37%), Gaps = 13/251 (5%) Query: 1 MYKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 MYK V++ + +L + S +++ + + G L LV +A V + G+ Sbjct: 19 MYKKMPLVALSLMAMLTLPNKSLAETVIERVARTGVLNVSTRVDLVPYAYVNDEDELVGY 78 Query: 60 DVDFCRAL----SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 V+ + + I D + + ER +L ++++DI T +T R+ + Sbjct: 79 SVELIELIRETLAQEIGKDVQIKVIVDDSLDERISSLLNREVDIACD-TTFTWQRDRFVD 137 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + G + + +SS I + + + K + + Sbjct: 138 FSLA--YGVSGIKVFVKEDSNLSSPDSFKNKRIAIIESVLS----PESIKVIESQVTVVD 191 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAIIQGD 234 + +E A D + D + L + T P+ + ++PD +A + + D Sbjct: 192 VDSIEAGIKAVEDGEVDGFAFDGTILEGTRQTLTNPNAYKVVPDESYFKHGIACMVPEQD 251 Query: 235 TEWYNIVSWTH 245 + + N+V+ T Sbjct: 252 STFLNLVNLTI 262 >gi|312864872|ref|ZP_07725103.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus downei F0415] gi|311099999|gb|EFQ58212.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus downei F0415] Length = 282 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 49/273 (17%), Positives = 95/273 (34%), Gaps = 10/273 (3%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F V+++ ++F+T K +K G + V + +G + GFDVD Sbjct: 15 FLVALVLASCSSRSNFATETDQWQTYSKEKTIKIGFDATFVPMGFEEKDGKYTGFDVDLA 74 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 A+ K+++ ++ + L++ ID++ T R LAF Sbjct: 75 NAVFKKYG---IKVEWQAIDWDMKETELKNGTIDLIWNGYSVTDER--KKELAFTEPYMV 129 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPIVFERVEE 181 + Q + K GISS++ ++G S+ QAG++ D K + + + Sbjct: 130 NQQVVVTKKSSGISSIAMMAGKSLGAQAGSSGYDAFESQPDLLKNKVKDKKAVQYSTFTQ 189 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +A R D D + ++ I+P A + D + Sbjct: 190 ALIDLQAGRIDGLLIDRVYANYYLEQEGKLDQYNIMPAGYEAESFAVGARKSDKTLVKKI 249 Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 + + A + K +D V+ Sbjct: 250 NQAFKELYQAGQFQKISK--KWFGEDVATKQVK 280 >gi|170741318|ref|YP_001769973.1| extracellular solute-binding protein [Methylobacterium sp. 4-46] gi|168195592|gb|ACA17539.1| extracellular solute-binding protein family 3 [Methylobacterium sp. 4-46] Length = 263 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 40/275 (14%), Positives = 94/275 (34%), Gaps = 15/275 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + ++L F+ +A +L D+ ++ + + + AN G D Sbjct: 1 MRRPILAALLAATAFVAMPFAAHADLLDDVLSAKKIRVATDLAIPPSGMIDANLKPTGSD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ + L+ + +++++ R +Q+ + D++ T R + Sbjct: 61 VETAQLLAKDLG---LELEFVQTTGATRIPNVQTNKADLIISTLSVTPERAKVIDFTKPY 117 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 G + K S L G +I V GTT + TL + + ++ Sbjct: 118 AALQSVVGCL--KSVEAKSWPDLKGKTIAVSRGTTQDTTLTNM---KDRDLRLARYDDDA 172 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A + + D + + ++ PS I+ LA + +G+ + Sbjct: 173 TMVTAAVSGQADCIATSATIVN--QIGVKNPSRVYEPKVPITTFDLAMGVRKGEPRFVEK 230 Query: 241 VSWTHYAMVTAE-ELGITQKNINQVSKDTTNPDVQ 274 ++ A + + G + P+++ Sbjct: 231 LN----AWIETNLKNGKLNAIYKKFHGSELPPELR 261 >gi|134278785|ref|ZP_01765499.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia pseudomallei 305] gi|134250569|gb|EBA50649.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia pseudomallei 305] Length = 273 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 40/269 (14%), Positives = 96/269 (35%), Gaps = 18/269 (6%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 + + + L + +A L I K G ++ G+ F + + +G+D+D Sbjct: 21 LLLASVAGLSLFAPQAHADALDTIAKSGIVRIGVFEDYPPFGSIGPDMKPQGYDIDVASL 80 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 + A+ +K++ + + R L + D+L + T R + + Y+ Sbjct: 81 IGKAL---NAKVELVQVTGDNRMAYLADHKTDMLL-SVGETPERAKVIDFSQPYAPYY-- 134 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 K + + L+G ++ V GT +L+++ A + F+ +A+ Sbjct: 135 LAVFGPKSLAVKNAGDLAGKTVAVARGTLEDLSVSKVAPASAV---IKRFDDPNGAISAF 191 Query: 187 RAHRCDAYT--GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + + D+ A + + P + + SP + + + V+ Sbjct: 192 LSGQAQLLVVGNDVGATIMARHPANDPEQ----KFSLFSSPDHVGLNKNEPRLKQKVN-- 245 Query: 245 HYAMVTAEELGITQKNINQVSKDTTNPDV 273 A+ A++ G + + D+ Sbjct: 246 -EAIANAKKDGTMNAISQKWLRAPLPADL 273 >gi|227888779|ref|ZP_04006584.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus johnsonii ATCC 33200] gi|227850616|gb|EEJ60702.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus johnsonii ATCC 33200] Length = 263 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 50/268 (18%), Positives = 90/268 (33%), Gaps = 11/268 (4%) Query: 1 MYKDFF----VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K + I+ L + + IK RG L G++ V + NG Sbjct: 1 MMKKIIRFLSLLIIVLASVGVAGCQGQENSWQAIKSRGTLVIGVDDSFVPMDFRQKNGKL 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFDVD +A+ I P + ++ + L++ I+++ T R + Sbjct: 61 VGFDVDLAKAVCKEIGLKPD---FQTIDWSMKETELRNGTINVIWNGYTKTKARAKKVAF 117 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV- 175 + Q + K +GI++ Q+ + VQ G++ L +Y K + V Sbjct: 118 --SKPYLENDQILVTRKNEGINNYRQMRWKILGVQTGSSGADDLDNYPKVLKKRVKSTVL 175 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 ++ +A R D D + E + I + D Sbjct: 176 YDTYNNAFIDLKAGRIDGLLIDGVYANYYLAHSKYQKEFKKEKLPYPSEKFSVGINKKDK 235 Query: 236 EWYNIVSWTHYAMVTAEEL-GITQKNIN 262 N ++ + EL I +K N Sbjct: 236 TLKNKINQALDHLEKTGELKKIREKWFN 263 >gi|221197837|ref|ZP_03570883.1| extracellular solute-binding protein, family 3 [Burkholderia multivorans CGD2M] gi|221204605|ref|ZP_03577622.1| extracellular solute-binding protein, family 3 [Burkholderia multivorans CGD2] gi|221213036|ref|ZP_03586012.1| extracellular solute-binding protein, family 3 [Burkholderia multivorans CGD1] gi|221167249|gb|EED99719.1| extracellular solute-binding protein, family 3 [Burkholderia multivorans CGD1] gi|221175462|gb|EEE07892.1| extracellular solute-binding protein, family 3 [Burkholderia multivorans CGD2] gi|221181769|gb|EEE14170.1| extracellular solute-binding protein, family 3 [Burkholderia multivorans CGD2M] Length = 264 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 58/272 (21%), Positives = 101/272 (37%), Gaps = 19/272 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K V+ L + F + + A +L +K+RG L+ G+ F G+ GFDVD Sbjct: 7 KKLLVAGL-IGTSFAAATAHAADLLDQVKQRGTLRIGLEGTFPPFNSKNPQGELVGFDVD 65 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 +A+++ + P +++ LQ+ + D++ T R+ +L P Sbjct: 66 IAKAVAAKLGVKP---EFVTTEWSGIIAGLQAGKFDVIVNQVGITDKRKETLDF--SPAY 120 Query: 123 YFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + I K S+ L G + V G T + +A ++K +P Sbjct: 121 TYSSAQLIQRKDDTRQFKSLEDLKGKKLGVALG-TNYMDMAKSVPGIDVKTYPGA----P 175 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E A R DA D L L + P ++ S +P +G+ ++ Sbjct: 176 EYLRDLAAGRLDAALNDRLMLAYLTKNSQLP--LRPGANVGSANPSGIPFKKGNPKFQKA 233 Query: 241 VSWTHYAMVTAEELGITQKNINQVSK-DTTNP 271 + AM E G K ++ D T P Sbjct: 234 IDD---AMTQLEADGTFTKISDKWFGIDVTKP 262 >gi|218510513|ref|ZP_03508391.1| probable amino acid ABC transporter, substrate-binding protein [Rhizobium etli Brasil 5] Length = 201 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 43/194 (22%), Positives = 74/194 (38%), Gaps = 4/194 (2%) Query: 1 MYKDFFVSI--LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M F + L L T S L ++ RG L G + + A+ +G Sbjct: 10 MTISFRTGVISLVAAALLSTPVLAEGSKLDEVLARGHLVLGTGSTNAPWHFKSADDKLQG 69 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD ++ A+F DP KI+Y+ ++ R + + ++DI + T R + +AF Sbjct: 70 FDVDMGHIIAKALFGDPEKIEYVNQSSDARIPNITTDKVDITCQFMTVTGER--AQQVAF 127 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y +G G ++ + + L A + A + +E Sbjct: 128 TIPYYREGVGLMLKADGKYADYAALKAAGSSATISVLQNVYAETMVHAALPEATVDQYES 187 Query: 179 VEEIDAAYRAHRCD 192 V+ I A + R D Sbjct: 188 VDLIYQALESGRAD 201 >gi|290893601|ref|ZP_06556583.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria monocytogenes FSL J2-071] gi|290556803|gb|EFD90335.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria monocytogenes FSL J2-071] Length = 486 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 53/278 (19%), Positives = 107/278 (38%), Gaps = 24/278 (8%) Query: 1 MYKDF---FVSILCLIILFFTSFST------NASILGDIKKRGFLKCGINTGLVGFAE-- 49 M K F +IL + I+ F+ F+T L I+++G L G++ + Sbjct: 1 MQKHLLQKFAAILLVFIVVFSGFTTVFAADTEDQTLAKIQEKGVLTVGLSADYPPYEFHQ 60 Query: 50 -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + GFDV + ++ + K++ +N +L++ +ID++ T Sbjct: 61 TIDGKDKVVGFDVSIAKKIAKDL---NVKLEIKEMNFDSLLGSLKTGKIDMIISGMSPTP 117 Query: 109 LREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 R+ + F Q ++ K K +SV+ SG + Q TT E + + Sbjct: 118 ERQKEVDF--SDPYMFVQQRVVIRKTDKDKFTSVNDFSGVKVGAQKQTTQE----ELAQN 171 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + ++V ++ ++++ DA + A + + I SK Sbjct: 172 ELVGSEVVSLQKVPDLILNLKSNKVDAVVLEGPVAEAYISQDKTLAMADIKFANGSKET- 230 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 A A+ +G T V+ + + L QK N++ Sbjct: 231 AIAMPKGSTALQEKVNASIKDIQDTGLLKKYQKEANKL 268 >gi|227504864|ref|ZP_03934913.1| glutamate-binding protein GluB [Corynebacterium striatum ATCC 6940] gi|227198555|gb|EEI78603.1| glutamate-binding protein GluB [Corynebacterium striatum ATCC 6940] Length = 295 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 42/270 (15%), Positives = 86/270 (31%), Gaps = 23/270 (8%) Query: 8 SILCLIILFFTSFSTNASI-------LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 ++L L ++ S L I + G + G G + +G G D Sbjct: 15 AVLASGALLAACGGSSDSAPGEGEGLLAHI-ESGNVTLGTKFDQPGLGLREGDGSMSGLD 73 Query: 61 VDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 VD + + I + KI++ + +R +++ Q+D+++ R + Sbjct: 74 VDVATYVVNHIAKEKGWAEPKIEWKETPSAQRETLIENGQVDMIAATYSINASRAEKVNF 133 Query: 117 AFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 Q ++ I + L G +C G+T + + + Sbjct: 134 --GGPYLVTHQALLVSADNAEIKGLDGLDGKILCSVTGSTPAQKVKEALPS----VQLQE 187 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL---PDIISKSPLAPAIIQ 232 F+ A DA T D + L N+ + V L + + + Sbjct: 188 FDTYSSCVEALSQGTIDAMTTDATILNGYAAQNEGKFKVVELEKDGKPFTDEYYGIGLAK 247 Query: 233 GDTEWYNIVSWTHYAMVTAEEL-GITQKNI 261 D E ++ M ++ E + N+ Sbjct: 248 DDQEATEAINAALKEMHSSGEFDKLVSANL 277 >gi|300172943|ref|YP_003772109.1| polar amino acid ABC transporter substrate-binding protein [Leuconostoc gasicomitatum LMG 18811] gi|299887322|emb|CBL91290.1| Polar amino acid ABC transporter, substrate binding protein [Leuconostoc gasicomitatum LMG 18811] Length = 284 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 42/276 (15%), Positives = 87/276 (31%), Gaps = 27/276 (9%) Query: 1 MYKD---------FFVSILCLIILFFTSFSTNASIL----------GDIKKRGFLKCGIN 41 M K F I+ + + ++ + + S IK+ + G++ Sbjct: 4 MKKKIVVNAIIGLLFFGIVVWLAVGLSAGAKHNSQANQETSKTDEWQRIKQDKQITIGLD 63 Query: 42 TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101 V +G GFDVD A+ + +++ P++ + L + ID + Sbjct: 64 DTFVPMGFRDKDGKIIGFDVDLANAVFKTMG---ITVKWQPIDWSMKETELNTGNIDAIW 120 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 T RE + + Q + KK I+S S + G + Q ++ + + Sbjct: 121 NGYTKTAAREKQVAF--SNTYHNATQVLVTLKKNNINSFSDMKGKVLGDQTASSGDESFN 178 Query: 162 DY---FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218 + K + + ++ ++ A R D D P + + Sbjct: 179 QHPKVLKQYVKDQKVVGYDTFDKAFNDLNAGRIDGLLIDEDYARYYVAHQANPRNYTVTV 238 Query: 219 DIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 S A + D + V+ T + Sbjct: 239 GGFSVDETAVGFRKSDNQLRQAVNQTLSQFKKDGRM 274 >gi|116254865|ref|YP_770701.1| putative ABC transporter component [Rhizobium leguminosarum bv. viciae 3841] gi|115259513|emb|CAK10651.1| putative ABC transporter component [Rhizobium leguminosarum bv. viciae 3841] Length = 278 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 40/258 (15%), Positives = 89/258 (34%), Gaps = 16/258 (6%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKI 78 A L +I L+C + FA + GFDVD C A++ + K Sbjct: 19 LPAQADQLDNIMSAKTLRCATFADVPPFASPDLKTREMAGFDVDLCGAIAKELG---VKA 75 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + P++ + R ++ ++DI N +TL R + Y + I+ Sbjct: 76 EIKPVSVEARVPEVKLGRVDITVANLAYTLSRAEQIQF--SDPYYLAKEMLIVPADDAGK 133 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + +G I G+T+E+++ K P+ F+ A + + + Sbjct: 134 KKADYAGQRIASTKGSTSEMSIK------LNKSDPLTFQDTASAYLAVQQGKARGMVANT 187 Query: 199 SALYALKLTNDRPSEHV-ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 + + + ++ + + P+ + + ++ + T+ E+ Sbjct: 188 MTTTKFVNESKSKGKAMRMIEEPMLYQPIGIGMAKDQPALTAKINEILRKLDTSGEIN-- 245 Query: 258 QKNINQVSKDTTNPDVQR 275 K ++ T + R Sbjct: 246 -KIWDKWLGPDTEYKMTR 262 >gi|329935647|ref|ZP_08285454.1| bifunctional protein [Streptomyces griseoaurantiacus M045] gi|329304908|gb|EGG48779.1| bifunctional protein [Streptomyces griseoaurantiacus M045] Length = 665 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 44/249 (17%), Positives = 84/249 (33%), Gaps = 14/249 (5%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 R L G G + G W GFD+D AL+ + D ++ + + R Sbjct: 413 ARKRLTIGAKEDQPGLSLHDRKGVWSGFDIDIAYALARELGYDEKQVDFYGVTTANRASK 472 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-----SGA 146 L++ ++D++ + T RE G+ F Y G ++ +K + + + Sbjct: 473 LRNGEVDLVVASYSMTPEREKRDGIRFVGPYYKAGTSLLVRRKSARYDLDEAVDVKRNHV 532 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD--AYTGDISALYAL 204 +C +T AD + + +E A D L Sbjct: 533 DVCTARDSTY----ADRLRKDGYTTGKWQPDTYKECVKRLLDRNSSVYAVASDDVLLAGY 588 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQKNINQ 263 D P+ +LP P A+ + D V ++ E + K+++ Sbjct: 589 AK--DDPAHLKLLPSGSGTEPYGVAMRKDDPLLRGRVCSALRKILAGAEWPEMYMKDLSP 646 Query: 264 VSKDTTNPD 272 ++ T P+ Sbjct: 647 LTGRKTAPN 655 >gi|331003781|ref|ZP_08327275.1| hypothetical protein HMPREF0491_02137 [Lachnospiraceae oral taxon 107 str. F0167] gi|330412164|gb|EGG91559.1| hypothetical protein HMPREF0491_02137 [Lachnospiraceae oral taxon 107 str. F0167] Length = 281 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 44/287 (15%), Positives = 89/287 (31%), Gaps = 27/287 (9%) Query: 1 MYKDFFVSILCLIILF--FTSFSTNASILGDIKK----------------RGFLKCGINT 42 M K + + IL +L ++ +S K + G + Sbjct: 1 MKKMYLLGILAAFVLAGCSSAKPAESSSADTSKAETTVAGETTTAAVTDSKNTFTVGFDQ 60 Query: 43 GLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102 V +G++ GFD++ ++ + + I+Y P+ + + L S ID + Sbjct: 61 DFPPMGFVGDDGEFTGFDLELAAEVAKRLGKE---IKYQPIAWDAKDMELSSGTIDCIWN 117 Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162 + + + Q F++ I S+ L+G ++ VQA ++ E L + Sbjct: 118 GFSI---QGREDKYTWSKPYMNNEQVFVVKSDSSIESIEDLAGKTVEVQADSSAEAALKE 174 Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222 + + DA D S + ++T +L +S Sbjct: 175 NTELASTFGKLQTVADYNTGFMDLDMGGVDAIAMD-SVVANYQITKRGGEGFTVLDTPLS 233 Query: 223 KSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 G+ + V M + + KD T Sbjct: 234 TEEYGIGFKLGNEALRDEVQKALDEMKADGTMKTISE--KWFGKDVT 278 >gi|225620106|ref|YP_002721363.1| family 3 extracellular solute-binding protein [Brachyspira hyodysenteriae WA1] gi|225214925|gb|ACN83659.1| extracellular solute-binding protein, family 3 [Brachyspira hyodysenteriae WA1] Length = 279 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 43/249 (17%), Positives = 80/249 (32%), Gaps = 9/249 (3%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 + S + L +K G L G++ NG+ GFD+D + +++ + + Sbjct: 36 ATSAEDNSLQKVKDAGKLVLGLDDTFAPMGFRDENGEVVGFDIDLAKEVANRLGVT---L 92 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + P+ L+L +D+L R+ + + +P I+ Sbjct: 93 EIKPIEWSSSILSLNKGDVDVLWNGVTINEARKQQINFS-KPYLNNKLVIVKASDDNTIN 151 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 S LSG + VQ G+ E AD + ++ +A R DA D Sbjct: 152 SKDDLSGKVLGVQVGSNDEALTAD--PSSKNAKEIRRYDVNVNAFLDLQAKRIDAVVIDE 209 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 A P V+ +++ + D + V M Sbjct: 210 VAAQYYIAEKKAP-FVVVENSPLTEELYGIGFRKSDAKLLAEVDRILDEMRADGTAAKIS 268 Query: 259 KNINQVSKD 267 + +KD Sbjct: 269 E--KWFAKD 275 >gi|241554156|ref|YP_002979369.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240863462|gb|ACS61124.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 278 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 40/258 (15%), Positives = 89/258 (34%), Gaps = 16/258 (6%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKI 78 A L +I L+C + FA + GFDVD C A++ + K Sbjct: 19 LPAKADQLDNIMSAKTLRCATFADVPPFASPDPKTREMAGFDVDLCGAIAKELG---VKA 75 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + P++ + R ++ ++DI N +TL R + Y + I+ Sbjct: 76 EIKPVSVEARVPEVKLGRVDITVANLAYTLSRAEQIQF--SDPYYLAKEMLIVPADDAGK 133 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + +G I G+T+E+++ K P+ F+ A + + + Sbjct: 134 KKADYAGQRIASTKGSTSEMSIK------LNKSDPLTFQDTASAYLAVQQGKARGMVANT 187 Query: 199 SALYALKLTNDRPSEHV-ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 + + + ++ + + P+ + + ++ + T+ E+ Sbjct: 188 MTTTKFVNESKSKGKAMRMIEEPMLYQPIGIGMAKDQPALTAKINEILRKLDTSGEIN-- 245 Query: 258 QKNINQVSKDTTNPDVQR 275 K ++ T + R Sbjct: 246 -KIWDKWLGPDTEYKMTR 262 >gi|160901197|ref|YP_001566779.1| extracellular solute-binding protein [Delftia acidovorans SPH-1] gi|160366781|gb|ABX38394.1| extracellular solute-binding protein family 3 [Delftia acidovorans SPH-1] Length = 308 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 57/229 (24%), Positives = 85/229 (37%), Gaps = 15/229 (6%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + L IK+RG L GI+ F + A G G+ + ++ + ++ +P+ Sbjct: 29 ATLDKIKQRGKLSVGIDGASPPFGVLDPATGKTGGYQTELAADIARRLGVP---LETVPV 85 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 A R LQS ++D+L N WT R L A P G G ++ K GI L Sbjct: 86 TASTRVQFLQSGKVDLLIANIQWTQERSEILSFAPTPYDLI-GGGALVAKASGIKRWEDL 144 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 G CV G+ LA+ + A + E A + C A ALY Sbjct: 145 RGKVACVSQGSNFAKPLAESYGA-----VVKGLRGIPESLLALKGGTCAASVHIQPALY- 198 Query: 204 LKLTNDRPSEHV----ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 KLT +E D + SP +G+T+ V Sbjct: 199 EKLTGPNAAEWKDFELGTQDQLIPSPTVVWTRRGETDTQAFVDKAIQDW 247 >gi|167587662|ref|ZP_02380050.1| extracellular solute-binding protein family 3 [Burkholderia ubonensis Bu] Length = 266 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 94/257 (36%), Gaps = 14/257 (5%) Query: 17 FTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 FT+ + +A +L +K+ G L+ G+ F +G +GFDVD +A+++ + Sbjct: 19 FTAVAAHAEDLLDSVKQAGVLRIGLEGTYPPFNSRGTSGQLEGFDVDVAKAVAAKLG--- 75 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 K Q++P LQ+ + D++ T R+ L + P TY Q K Sbjct: 76 VKTQFVPTEWSGIIAGLQAGKFDVIVNQVTITPQRKEVLDFSQ-PYTYSAAQLIQRKDDK 134 Query: 136 -GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 S+ G + V GT D + E A R +A Sbjct: 135 RDFKSLEDFKGKKLGVTLGTNY-----DQMARAVPGIEVQTYPGAPEKLRDLAAGRIEAT 189 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D L + T++ P + + + +A +G+ ++ ++ ++ L Sbjct: 190 LDDRLMLPYMIKTSNLPLRAGAVLNGGKQE-MAIPFRKGNPKFEKAINDALTSLKQDGTL 248 Query: 255 GITQKNINQVSKDTTNP 271 ++ D T P Sbjct: 249 KKIS--MHWFGSDVTVP 263 >gi|289435591|ref|YP_003465463.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289171835|emb|CBH28381.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 486 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 49/278 (17%), Positives = 105/278 (37%), Gaps = 24/278 (8%) Query: 1 MYKDFFVSILCLIILFF-------TSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAE-- 49 M K+F + + ++F T F+ + L I+++G L G++ + Sbjct: 1 MQKNFLQKLAAIALVFIFVFSGFTTVFAADNQDETLKKIQEKGVLTVGLSADYPPYEFHQ 60 Query: 50 -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + GFDV ++ + K+ +N +L++ +ID++ T Sbjct: 61 TIDGKDKIVGFDVSIAEKIAKDL---DVKLDIKEMNFDSLLGSLKTGKIDMIISGMSPTP 117 Query: 109 LREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 R+ + F Q ++ K K+ +SV+ +G + Q TT E + + Sbjct: 118 ERQKEVDF--SDPYMFVQQRVVVRKADKEKFTSVNDFNGVKVGAQKQTTQE----ELAQN 171 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + ++V ++ +++ DA + A + + I + SK Sbjct: 172 ELVGSDVVSLQKVPDLLLNLSSNKVDAVVLEGPVAEAYLSQDKTLAMADIKFENGSKET- 230 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 A A+ +G T V+ + + L QK N++ Sbjct: 231 AIALPKGSTALQEKVNASIKEIQDTGLLKEYQKEANKL 268 >gi|288959825|ref|YP_003450165.1| polar amino acid transport system substrate-binding protein [Azospirillum sp. B510] gi|288912133|dbj|BAI73621.1| polar amino acid transport system substrate-binding protein [Azospirillum sp. B510] Length = 277 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 48/221 (21%), Positives = 85/221 (38%), Gaps = 14/221 (6%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLN 84 L IK+RG L G+ F + A + GF++D L+ + K++ + + Sbjct: 30 TLDRIKQRGSLVAGVILSGAPFGYIDAKSQEQKGFNIDLATELARGLG---VKLETVTVT 86 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM-HKKKGISSVSQL 143 R LQ ++D+L N WT R + L F P + G + K + L Sbjct: 87 PPNRVQFLQQGKVDLLIANMSWTEER--AEMLDFVPTAFERSGGIALGRKGTPVKDWPDL 144 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 G ++C+ G LA+ A F + A + +CDA + L Sbjct: 145 KGKTVCLSQGANFTKPLAEEIGA-----KIKGFPSQPDSLLALKGGQCDAAVHTGATLRV 199 Query: 204 LKLTND-RPSEHVIL-PDIISKSPLAPAIIQGDTEWYNIVS 242 + L + ++ IL P + S + +G+T+ + Sbjct: 200 MLLDHPEDWKDYEILTPTDLLPSLNVIWVRKGETDAREALD 240 >gi|89258357|gb|ABD65400.1| putative periplasmic substrate binding protein [Ochrobactrum anthropi] Length = 261 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 43/246 (17%), Positives = 80/246 (32%), Gaps = 14/246 (5%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 A L IK G LK ++ F V + GFD A++ + P Q + Sbjct: 26 QADDLEKIKASGELKIAMSGQYPPFNFVNEKNEVVGFDASIGSAIAERMQLKP---QLIT 82 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 L++ + D + + T RE ++ Y G+ + + + + Sbjct: 83 TAWDGIVAGLRAGKFDTVVGSMTITPEREKAVDF--VGPYYHAGRAVFVKEDSAVQKLDD 140 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G ++ V G T E + ++ + E+ + R DA D + Sbjct: 141 LKGKTLGVTLGETHEKWAR-----SQGGWTIRTYKGLPELMLELNSGRVDAIVVDNIPVM 195 Query: 203 ALKLTNDRPSEHVILPDIISKS-PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 + + PDI S + AI + + E + ++ G +K Sbjct: 196 VAIKETGQKVRKLDTPDIEGGSVAIGIAIRKNNPELKAAMQKALDEIMA---DGTYEKIS 252 Query: 262 NQVSKD 267 Q Sbjct: 253 MQWVGS 258 >gi|166366656|ref|YP_001658929.1| extracellular solute-binding protein [Microcystis aeruginosa NIES-843] gi|166089029|dbj|BAG03737.1| extracellular solute-binding protein [Microcystis aeruginosa NIES-843] Length = 263 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 49/264 (18%), Positives = 85/264 (32%), Gaps = 25/264 (9%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAI---FD 73 T S +L I + G LK F+ + G W G+ V+ R + + Sbjct: 6 TIPSNEEPVLQRIARTGELKAAARKDATPFSYIDEKTGQWTGYGVELMRLVQRRLAQELG 65 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 P I + RF ++ Q+D+ T R + + + G F+ K Sbjct: 66 KPITITFTEATTNNRFQQVEQGQVDLSCNAATITEERLEKVNFSI--PYFMTGAQFLT-K 122 Query: 134 KKGISSVS---QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190 ++ + + L+ +I TTT+ + + N + E A + Sbjct: 123 RENVDKIDINHTLAAVAIAYIPHTTTDSIIRYIYPLANWQ----AVSDRSEAVAKLQRGE 178 Query: 191 CDAYTGDISALYA-LKLTNDRPSEHVILP-DIISKSPLAPAIIQGDTEWYNIVSWTH--- 245 +A D L L P + V+LP I+ + + D EW V Sbjct: 179 VNAVVSDGILLLGELVKQGQDPRQFVLLPSQPITTELYGCILPKNDPEWKKFVDTVVGSN 238 Query: 246 ------YAMVTAEELGITQKNINQ 263 EE + +NQ Sbjct: 239 DNQKLREQWFNLEESSFPYRILNQ 262 >gi|134295624|ref|YP_001119359.1| extracellular solute-binding protein [Burkholderia vietnamiensis G4] gi|134138781|gb|ABO54524.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia vietnamiensis G4] Length = 264 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 56/277 (20%), Positives = 103/277 (37%), Gaps = 21/277 (7%) Query: 1 MYKDFFVSILCLIILFFT---SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M +L ++ + + + A +L ++K+RG L+ G+ F G+ Sbjct: 1 MKISLLKKLLVAGLVGTSFAAATAHAADLLDEVKQRGTLRVGLEGTFPPFNSKSPQGELV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD +A+++ + K +++ LQ+ + D+++ T R+ +L Sbjct: 61 GFDVDIAKAVAAKLG---VKAEFVTTEWSGIIAGLQAGKFDVIANQVGITDKRKETLDF- 116 Query: 118 FRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 P + I K S+ L G + V G T + +A ++K +P Sbjct: 117 -SPAYTYSSAQLIQRKDDTRQFKSLEDLKGKKLGVALG-TNYMDMAKSVPGIDVKTYPGA 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 E A R DA D L L + P ++ S +P +G+ Sbjct: 175 ----PEYLRDLAAGRLDAALNDRLMLAYLTKNSQLP--LRPGANVGSANPSGIPFKKGNP 228 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSK-DTTNP 271 ++ + AM E G K ++ D T P Sbjct: 229 KFQKAIDD---AMTQLEADGTFTKISDKWFGIDVTKP 262 >gi|327193816|gb|EGE60693.1| amino acid ABC transporter substrate-binding protein [Rhizobium etli CNPAF512] Length = 321 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 40/253 (15%), Positives = 87/253 (34%), Gaps = 16/253 (6%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 L I L+C + FA + GFDVD C A++ + K + P+ Sbjct: 67 DQLDTIMSAKTLRCATFADVPPFASPDPKTREMAGFDVDLCGAIAKELG---VKAEIKPV 123 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 + + R ++ ++DI N +TL R + Y + I+ + + Sbjct: 124 SVEARVPEVKLGRVDITVANLAYTLSRAEQIQF--SDPYYLAKEMLIVPADDAGKTKADY 181 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 +G I G+T+E+++ K P+ F+ A + + + Sbjct: 182 AGQRIASTKGSTSEMSIK------LNKSEPLTFQDTASAYLAVQQGKARGMVANTMTTTK 235 Query: 204 LKLTNDRPSEHV-ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 + + + ++ + + P+ + + V+ + +E G K + Sbjct: 236 FVNESKSKGKEMRMIEEPMLYQPIGIGMAKDQPALTAKVNEILH---KLDESGEINKIWD 292 Query: 263 QVSKDTTNPDVQR 275 + T + R Sbjct: 293 KWLGPNTEYKMTR 305 >gi|282852735|ref|ZP_06262077.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus gasseri 224-1] gi|282556477|gb|EFB62097.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus gasseri 224-1] Length = 243 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 49/248 (19%), Positives = 85/248 (34%), Gaps = 7/248 (2%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 AS IK+RG L G++ V + NG GFDVD A+ I P Sbjct: 1 MAGCQRQASSWQKIKERGTLVIGVDDSFVPMDFRQKNGKLVGFDVDLATAVCKEIGLKPD 60 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 + ++ + L++ ID++ T R + + + Q + KK+ Sbjct: 61 ---FQTIDWSMKETELRNGTIDVIWNGYTKTKARAKKVAFSR--PYLENDQILVTRKKEQ 115 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV-FERVEEIDAAYRAHRCDAYT 195 I++ Q+ G + VQ G++ L +Y + V ++ +A R D Sbjct: 116 INNYCQMKGRILGVQTGSSGADDLDNYPNVLKKRVKSTVLYDTYNNAFIDLKAGRIDGLL 175 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL- 254 D + E + I + D + ++ + EL Sbjct: 176 IDGVYANYYLAHSKYQKEFKKEELPYPSEKFSVGINKKDQILKDKINQALDHLEKTGELE 235 Query: 255 GITQKNIN 262 I QK N Sbjct: 236 KIKQKWFN 243 >gi|161524852|ref|YP_001579864.1| extracellular solute-binding protein [Burkholderia multivorans ATCC 17616] gi|189350398|ref|YP_001946026.1| polar amino acid transporter substrate-binding protein [Burkholderia multivorans ATCC 17616] gi|160342281|gb|ABX15367.1| extracellular solute-binding protein family 3 [Burkholderia multivorans ATCC 17616] gi|189334420|dbj|BAG43490.1| polar amino acid transport system substrate-binding protein [Burkholderia multivorans ATCC 17616] Length = 264 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 59/272 (21%), Positives = 101/272 (37%), Gaps = 19/272 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K V+ L + F + + A +L +K+RG L+ G+ F A G+ GFDVD Sbjct: 7 KKLLVAGL-IGTSFAAATAHAADLLDQVKQRGTLRIGLEGTFPPFNSKNAQGELVGFDVD 65 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 +A+++ + P +++ LQ+ + D++ T R+ +L P Sbjct: 66 IAKAVAAKLGVKP---EFVTTEWSGIIAGLQAGKFDVIVNQVGITDKRKETLDF--SPAY 120 Query: 123 YFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + I K S+ L G + V G T + +A ++K +P Sbjct: 121 TYSSAQLIQRKDDTRQFKSLEDLKGKKLGVALG-TNYMDMAKSVPGIDVKTYPGA----P 175 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E A R DA D L L + P ++ S +P +G+ ++ Sbjct: 176 EYLRDLAAGRLDAALNDRLMLAYLTKNSQLP--LRPGANVGSANPSGIPFKKGNPKFQKA 233 Query: 241 VSWTHYAMVTAEELGITQKNINQVSK-DTTNP 271 + AM E G K + D T P Sbjct: 234 IDD---AMTQLEADGTFTKISEKWFGIDVTKP 262 >gi|118592146|ref|ZP_01549539.1| ABC amino acid transporter, periplasmic ligand binding protein [Stappia aggregata IAM 12614] gi|118435118|gb|EAV41766.1| ABC amino acid transporter, periplasmic ligand binding protein [Stappia aggregata IAM 12614] Length = 277 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 38/279 (13%), Positives = 94/279 (33%), Gaps = 16/279 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASIL----GDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M ++L + ++ A IK++G ++ G+ F +G Sbjct: 1 MTLRSVGALLIAATIAGSAVPAMAQEFPPLPEMIKEQGKIRIGVKCDSPPFGATGVDGKP 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G +V+ + + F + + ++ R +L S ++D++ RE + Sbjct: 61 MGIEVEMAKKIGEFAFGSEDGAELSCVTSEARISSLNSGKLDLILATLGRFPAREEVIDF 120 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 I ++ ++ K + +S L G ++ + G + L + + Sbjct: 121 --SNIYFWGTSNVLVQKDSPVQKLSDLEGKTLLIVKGGSQIKWLEENIP----DIEMMQL 174 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + A R + + GD +Y L + ++ + + + +G+ E Sbjct: 175 NTTADGVQALIQGRAEGFVGDGGLIYTLG---GNYEDLRVVEEGLDLGVNGIGLRKGEPE 231 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 V+ A+ + I + ++ DV + Sbjct: 232 LKAFVN---AALDKLRADNFYETVIPEFVEEPAVVDVMK 267 >gi|319792874|ref|YP_004154514.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] gi|315595337|gb|ADU36403.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] Length = 265 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 43/242 (17%), Positives = 81/242 (33%), Gaps = 11/242 (4%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 +A + DIKK+G + G+ + A G+D D + L+ K + Sbjct: 27 ASAQSVADIKKKGEITIGMLVDFPPYGTTDAKNQPDGYDADVAKLLAKDWG---VKANIV 83 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 P+ R L + ++D+L + T R + + K I + + Sbjct: 84 PVTGPNRIPFLLTNKVDLLVASLAVTPERAKQVQFSQ--PYAAATIVLYGATKTPIKAAT 141 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L G + V +T ++ + KA F+ A + + DA S Sbjct: 142 DLKGLRVGVARASTQDVAVT---KAAPEGTEIRRFDDDASAMQALISGQVDAI--GCSVT 196 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQKN 260 A ++ P+ + + + A+ G E V+ EL + QK Sbjct: 197 VAAQIAKRVPAGTYENKFTLVQQSMGIAMRPGQEELTKAVNEFVQKNTANGELNKLYQKW 256 Query: 261 IN 262 + Sbjct: 257 LQ 258 >gi|227432436|ref|ZP_03914424.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227351802|gb|EEJ42040.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 284 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 48/289 (16%), Positives = 98/289 (33%), Gaps = 30/289 (10%) Query: 1 MYKD---------FFVSILCLIILFFTSFSTNA----------SILGDIKKRGFLKCGIN 41 M K F++++ + L ++ S + IK+ + G++ Sbjct: 4 MKKKIVVNSIVGILFIALVVMAALSLSNNSQKSKGTEQTVVKTDQWSRIKREKQITIGLD 63 Query: 42 TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101 V +G GFDVD A+ ++ K+++ P++ + L + ID + Sbjct: 64 DTFVPMGFRDKSGKLVGFDVDLATAVFKSLG---IKVKWQPIDWSMKETELNTGNIDAIW 120 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 T RE + + Q + KK I+ S + + Q ++ + T A Sbjct: 121 NGYTITDDREKKVAF--STPYHKATQVLVTLKKSNINKFSDMQDKVLGDQTASSGDQTFA 178 Query: 162 DY---FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218 Y K + I ++ ++ A+R D D P+++ I Sbjct: 179 QYPKVLKQYVKDQKVIGYDTFDKAFNDLNANRIDGLLIDEDYARYYVAHQSNPNDYTITT 238 Query: 219 DIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 + A + D + V+ T ++ G QK + + Sbjct: 239 GGFPVNDNAVGFRKADKKLRQAVNKELK---TYKKDGCLQKYSTKWFGN 284 >gi|300309582|ref|YP_003773674.1| amino acid ABC transporter/signal transduction system periplasmic binding protein [Herbaspirillum seropedicae SmR1] gi|300072367|gb|ADJ61766.1| ABC-type amino acid transport/signal transduction systems, periplasmic binding protein [Herbaspirillum seropedicae SmR1] Length = 269 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 39/238 (16%), Positives = 77/238 (32%), Gaps = 11/238 (4%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 A L I L+ I+ + ++ G DV+ + ++ +++ +P Sbjct: 27 QADQLDTILAAKKLRVAIDLAVPPYSMKDDKLRLIGSDVETAQRMAKDFG---LELEVVP 83 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 R LQ+ + DI+ T R + + G + I+S + Sbjct: 84 TTLTNRVPYLQTNKADIVISAFSITPERAKVIDFSVPYAPILVVVG--APRSMKITSPAD 141 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+G I GTT + L + F+ A + + D + L Sbjct: 142 LAGKKIIATRGTTNDQELTKIAPS---SATITRFDDDATSMTAMVSGQADIWATSPMLL- 197 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS-WTHYAMVTAEELGITQK 259 + PS + + + LA + +G+ + W + E I +K Sbjct: 198 -KVVNQKNPSRDIESKLTLKANLLAVGLRKGEPRLKEKIDGWIRTNLSNGELNTIYKK 254 >gi|29829027|ref|NP_823661.1| glutamate binding periplasmic protein [Streptomyces avermitilis MA-4680] gi|29606133|dbj|BAC70196.1| putative glutamate ABC transporter substrate-binding protein [Streptomyces avermitilis MA-4680] Length = 277 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 39/241 (16%), Positives = 81/241 (33%), Gaps = 10/241 (4%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 + GI G + G + GFDVD ++ + +I++ + +R LQ Sbjct: 39 ITIGIKFDQPGIGQKTPQG-YSGFDVDVATYIAKQLGYKADQIEWKESKSADRETMLQRG 97 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGT 154 + ++ + T R+ + A Q ++ I S S L+ +C G+ Sbjct: 98 DVKFIAASYSITPERQEKVDFA--GPYLLAHQDVLVRADDNSIKSPSDLNSKKLCSVTGS 155 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T+ + D K + + + + D T D S L + Sbjct: 156 TSAQNVKD---KLAPKANLLKYPTYSACLTGLQNKAIDGLTTDDSILAGYAAQASFKGKF 212 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT--AEELGITQKNINQVSKDTTNPD 272 + ++ + +G ++ ++ MV+ A E +T K+ P Sbjct: 213 KLAGFKMTNENYGIGVKKG-SDLKAKINTALEKMVSDGAWEKAVTANFGPANYKNEPAPK 271 Query: 273 V 273 + Sbjct: 272 I 272 >gi|331266481|ref|YP_004326111.1| ABC transporter substrate binding lipoprotein-amino acid transport [Streptococcus oralis Uo5] gi|326683153|emb|CBZ00771.1| ABC transporter substrate binding lipoprotein-amino acid transport [Streptococcus oralis Uo5] Length = 279 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 50/280 (17%), Positives = 100/280 (35%), Gaps = 17/280 (6%) Query: 1 MYKDFFVSILCLIILFF-TSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M + +L L FF T+ + A +K+G + G + V + NG Sbjct: 1 MKRKKIALVLALFFSFFLTACTQKASDPNQDNWAKYQKQGSITIGFDNTFVPMGFEEKNG 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + GFD+D +A+S + KI++ P++ + LQ+ ID + T R+ + Sbjct: 61 QYAGFDIDLAQAVSEKLG---IKIKFQPIDWDMKETELQNGTIDAIWNGYTATDERKEKV 117 Query: 115 GLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMK 170 I Y + Q ++ KK I S+ ++ + QAG++ L + K Sbjct: 118 AFT---IPYMENQQVLVSKKSQNIHSIQAMTDKVLGAQAGSSGYLNFEGQPELLKNRVKD 174 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 ++ E + R DA D + +++ + A + Sbjct: 175 QKANQYQSFNEALIDLKNDRIDALLIDRVYANYYLQSEGILNDYNVFSAGFESEAFAVGV 234 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELG-ITQKNINQVSKDTT 269 D ++ ++ + I+QK + + Sbjct: 235 RPADKTLLAALNQALVSLYQEGKFQEISQKWFGEDVATSQ 274 >gi|330970137|gb|EGH70203.1| glutamine ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. aceris str. M302273PT] Length = 277 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 41/239 (17%), Positives = 87/239 (36%), Gaps = 13/239 (5%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 +A L D+ + L CG+ + F+ + G DVD C+AL+ + + ++ Sbjct: 21 HADQLSDVMSKKSLSCGVYADVPPFSAPDPETRELVGMDVDLCKALAKHMGVE---LELK 77 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 PL+ + R ++ ++D++ N +T R + Y + ++ S Sbjct: 78 PLSVEARIPEVKMGRVDVIFANLAYTKSRAEQIQF--SDPYYIAKETLVVRAANADQPKS 135 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 G I G+T+E ++ P+ F+ A + ++ + Sbjct: 136 FFKGKRISSTKGSTSEQSIR------LADATPVTFQDTGSAYMALQQNKVVGLVTNTMTA 189 Query: 202 YALKLTNDRPS-EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L E I + ++ P+ + QG+ + V+ + M A E+ Sbjct: 190 IKLVGQAKAGGVELAIAKEPMALEPIGAGMRQGEPAFLAKVNESLREMEAAGEIDAIWA 248 >gi|330983020|gb|EGH81123.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 210 Score = 140 bits (352), Expect = 5e-31, Method: Composition-based stats. Identities = 30/176 (17%), Positives = 58/176 (32%), Gaps = 3/176 (1%) Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 R +Q+ +D+ +T R+ + + + G + K L G Sbjct: 1 TRIPLVQNGTVDVECGSTTNNAERQQQVDFSIGI--FEVGTRLLSKKDSSYKDFDDLKGK 58 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 ++ AGTT+E L M + I + E + R A+ D + L Sbjct: 59 NVVTTAGTTSERILKAMNADKQMGMNVISAKDHGESFQMLESGRAVAFMMDDALLAGEMA 118 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQKNI 261 +P + + S + +GD ++ V A + ++ I K Sbjct: 119 KAKKPDDWAVTGTAQSYEIYGCMVRKGDAQFKKAVDDAIVATYKSGDINAIYSKWF 174 >gi|268318929|ref|YP_003292585.1| ABC transporter solute-binding component [Lactobacillus johnsonii FI9785] gi|262397304|emb|CAX66318.1| ABC transporter solute-binding component [Lactobacillus johnsonii FI9785] Length = 249 Score = 140 bits (352), Expect = 5e-31, Method: Composition-based stats. Identities = 49/253 (19%), Positives = 85/253 (33%), Gaps = 7/253 (2%) Query: 12 LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI 71 L + + IK RG L G++ V + NG GFDVD +A I Sbjct: 2 LTSVGVAGCQGQENSWQAIKSRGTLVIGVDDSFVPMDFRQKNGKLVGFDVDLAKAACKEI 61 Query: 72 FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131 P + ++ + L++ ID++ T R + + Q + Sbjct: 62 GLKPD---FQTIDWSMKETELRNGTIDVIWNGYTKTKARAKKVAF--SKPYLENDQILVT 116 Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV-FERVEEIDAAYRAHR 190 K +GI++ Q+ G + VQ G++ L +Y K + V ++ +A R Sbjct: 117 RKNEGINNYRQMRGKILGVQTGSSGADDLDNYPKVLKKRVKSTVLYDTYNNAFIDLKAGR 176 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 D D + E + I + D N ++ + Sbjct: 177 IDGLLIDGVYANYYLAHSKYQKEFKKEKLPYPSEKFSVGINKKDETLKNKINQALDHLEK 236 Query: 251 AEEL-GITQKNIN 262 EL I +K N Sbjct: 237 TGELKKIREKWFN 249 >gi|238752741|ref|ZP_04614211.1| Cystine-binding periplasmic protein [Yersinia rohdei ATCC 43380] gi|238709072|gb|EEQ01320.1| Cystine-binding periplasmic protein [Yersinia rohdei ATCC 43380] Length = 253 Score = 140 bits (352), Expect = 5e-31, Method: Composition-based stats. Identities = 48/258 (18%), Positives = 83/258 (32%), Gaps = 14/258 (5%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 V++ L S++ +L +K+RG L G+ F+ +G GF+VDF Sbjct: 1 MVAVALATGLNVKSYAA-GDLLDQVKERGVLVVGLEGTYPPFSFQGEDGKLTGFEVDFAN 59 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 AL+ + K + P +L+SK+ID+ + R+ Sbjct: 60 ALAEHMG---VKAKITPTKWDGMLASLESKRIDVAINQVTISDERKKKYDF--STPYTVS 114 Query: 126 GQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 G + K + L G + V G+ E L + K ++ Sbjct: 115 GIQVLTKKGNEGQFNKPEDLEGKKVGVGLGSNYEQWLRENLK----GVDIRTYDDDPTKY 170 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 R R DA D L AL L ++ A+ + + E ++ Sbjct: 171 QDLRVGRTDAILVDR--LAALDLVKKTGGTLAAAGPAFARQESGVALRKNNPELLAAINQ 228 Query: 244 THYAMVTAEELGITQKNI 261 M L + Sbjct: 229 AIAEMQQDGTLAKISEKY 246 >gi|290960317|ref|YP_003491499.1| extracellular transport-associated solute-binding protein [Streptomyces scabiei 87.22] gi|260649843|emb|CBG72959.1| putative extracellular transport-associated solute-binding protein [Streptomyces scabiei 87.22] Length = 350 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 38/232 (16%), Positives = 79/232 (34%), Gaps = 14/232 (6%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGD-----WKGFDVDFCRALSSAIFDDPSK 77 + + + IK GF+ G++ + N +GFD+D R ++ I DP K Sbjct: 87 SGTTIQRIKDNGFITVGVDQNSYRWGYRDPNAKDDGAQLEGFDIDIVRRIAKEILGDPDK 146 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 + + + R AL+ ++D++ R + R + + + GQ + K I Sbjct: 147 VHFKAIPTSRRIPALRDGEVDMVVRTMTISCERMDEVAFSQ--PYFRTGQQVLAPKSSTI 204 Query: 138 SSV-SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE---EIDAAYRAHRCDA 193 L+ IC A +T L K+ + + +V + + + DA Sbjct: 205 KGYGKSLADKKICTAATSTALTALTAGKKSGEVPASTDISLQVPNQLDCLVRLQLGQVDA 264 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 D + + + + + A+ + V+ Sbjct: 265 VVTDGALAASQAAQDPTVDLK---GEPFTTEYYGVAMNLDAKDLVRRVNQVL 313 >gi|238758079|ref|ZP_04619259.1| Cystine-binding periplasmic protein [Yersinia aldovae ATCC 35236] gi|238703617|gb|EEP96154.1| Cystine-binding periplasmic protein [Yersinia aldovae ATCC 35236] Length = 272 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 48/262 (18%), Positives = 83/262 (31%), Gaps = 13/262 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + L L S+LG +K+RG L G+ F+ +G GF+V Sbjct: 15 KAALGMMALTLAAGLNVKSYAADSLLGQVKERGTLIVGLEGTYPPFSFQGEDGKLTGFEV 74 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 DF L+ + K++ P +L+SK+ID+ + R+ Sbjct: 75 DFANELAEHMG---VKVKLAPTKWDGMLASLESKRIDVAINQVTISDERKKKYDF--STP 129 Query: 122 TYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 G + K + L G + V G+ E L +A+ ++ Sbjct: 130 YTISGIQVLTKKGNEGRFTKPEDLEGKKVGVGLGSNYEQWL----RANLKGVDIRTYDDD 185 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 R R DA D L AL L + ++ A+ + + E Sbjct: 186 PTKYQDLRVGRTDAILVDR--LAALDLVKKTHDTLAVAGPAFARQESGVALRKNNPELLA 243 Query: 240 IVSWTHYAMVTAEELGITQKNI 261 ++ M L + Sbjct: 244 AINKAIAEMQQDGTLAKISEKY 265 >gi|161613484|ref|YP_001587449.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|161362848|gb|ABX66616.1| hypothetical protein SPAB_01201 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 244 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 46/247 (18%), Positives = 85/247 (34%), Gaps = 16/247 (6%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 + +L +K+RG L G+ F+ +G GF+VDF AL+ + Sbjct: 7 ADEGLLNKVKERGTLLVGLEGTYPPFSFQGEDGKLTGFEVDFAEALAKHLGVKAL---LK 63 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISS 139 P +L +K+ID++ + +R+ G ++ K I + Sbjct: 64 PTKWDGILASLDAKRIDVVINQVTISDVRKKKYDF--STPYTVSGVQALVKKGNEGTIKT 121 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L G + V GT ++ + H ++ R R DA D Sbjct: 122 AADLQGKKVGVGLGT----NYEEWLRQHVQGVDIRTYDDDPTKYQDLRVGRIDAILVDR- 176 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L AL L + D S+ A+ +G+ + V A+ ++ G + Sbjct: 177 -LAALDLVKKTKGTLAVTGDAFSRQESGVALRKGNEDLLKAVD---NAIAEMQKDGTLKA 232 Query: 260 NINQVSK 266 + Sbjct: 233 LSEKWFG 239 >gi|300870611|ref|YP_003785482.1| polar amino acid uptake ABC transporter amino acid-binding protein [Brachyspira pilosicoli 95/1000] gi|283462653|gb|ADB22527.1| oligopeptide-binding protein 5 [Brachyspira pilosicoli] gi|300688310|gb|ADK30981.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Brachyspira pilosicoli 95/1000] Length = 271 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 45/250 (18%), Positives = 92/250 (36%), Gaps = 8/250 (3%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 T S+ + L +K+ G L G++ L NG+ GFD+D R +++ + + Sbjct: 25 TEVSSADNSLQKVKENGKLVLGLDDTLAPMGFRDDNGEIVGFDIDLAREVANRLGVE--- 81 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++ P++ L+L+ +D++ R+ + +P Y + I Sbjct: 82 LEAKPIDWSSAILSLKKGDVDVIWNGFAVNESRKQQVNFT-KPYLYNRLMIAKYSDRDDI 140 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 +S +L G + VQ+G++ TL + ++ A R DA D Sbjct: 141 NSKEELKGKIVGVQSGSSNYETLVND-PVSKEIKEIRQYDSYVNAFLDLEAKRIDAVIVD 199 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 + ++ + ++ I+ L+ + + DTE N + M + Sbjct: 200 E-IVARYYISKENADFTLLEDKPITSQYLSVGLRKTDTELLNAIDKALDDMRADGKAAEI 258 Query: 258 QKNINQVSKD 267 KD Sbjct: 259 ST--KWFGKD 266 >gi|89072894|ref|ZP_01159451.1| putative amino acid ABC transporter [Photobacterium sp. SKA34] gi|89051416|gb|EAR56871.1| putative amino acid ABC transporter [Photobacterium sp. SKA34] Length = 270 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 53/252 (21%), Positives = 89/252 (35%), Gaps = 18/252 (7%) Query: 1 MYKDFFVSILCLIILFFTS--FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + F V I L +L S + S L +K+RG L+ G++T V +A G+ G Sbjct: 1 MKRFFAVLITALTLLLSASHALAAEKSTLEQVKERGTLRVGLST-FVPWAMRDKQGELIG 59 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 F+VD + L+ KI+++P AL + + D++ T R +S+ Sbjct: 60 FEVDVAKRLAKDAG---VKIEFIPTAWDGIIPALLAGKFDVIIGGMSITPQRNLSVLF-- 114 Query: 119 RPITYFDGQGFIMHKKKGIS--SVSQLSGASI--CVQAGTTTELTLADYFKAHNMKYHPI 174 G K+ S++ + S+ V+ G T T YF Sbjct: 115 TTPYSHSGVQLAASKELAGDKLSIADYNKRSVTLAVRRGAVTVQTAKKYFPKA----KLR 170 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 F+ + A + L + + +S+ AI QGD Sbjct: 171 QFDDESQAFQEVLNGNAQAVLASTPKPEQMTLQYKD-KLFLPFKERLSQGSEGFAIRQGD 229 Query: 235 TEWYN-IVSWTH 245 N +W Sbjct: 230 FNLLNFFNNWIL 241 >gi|220929055|ref|YP_002505964.1| ABC transporter [Clostridium cellulolyticum H10] gi|219999383|gb|ACL75984.1| ABC transporter related [Clostridium cellulolyticum H10] Length = 500 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 49/259 (18%), Positives = 96/259 (37%), Gaps = 8/259 (3%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 +F + S L +K+ + G+ + GFDVD ++++ + Sbjct: 242 MFMKKIFSQKSSLNSVKRANTINIGVVDNSPPMCFSEDGNKLVGFDVDLAKSIAKRLNVS 301 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 + PL KER + + +ID + T R+ + + ++Y I+ K Sbjct: 302 ---LNLQPLKNKERIEYILTNKIDACIAKLNHTKARDNLIDFS---VSYLQDCKKILMYK 355 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFERVEEIDAAYRAHRCDA 193 + I +S+L+G I T+T + + ++F+ HN K + I + E+ A + Sbjct: 356 ENIGPISELAGKDIAYTIDTSTAMEIENFFEEHNWVKPNFIAYCSDEQAYNAMKHKLVAG 415 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 Y D + P++ S + + D+EW N ++ + + E Sbjct: 416 YASDEIIINHFINGEAERGNFQYHPEVCCYSYFCVGVSENDSEWLNEINNILLEIYDSGE 475 Query: 254 -LGITQKNINQVSKDTTNP 271 I K K P Sbjct: 476 YEEIFYKWFKSQDKKFLKP 494 >gi|329927214|ref|ZP_08281512.1| ABC transporter, substrate-binding protein, family 3 [Paenibacillus sp. HGF5] gi|328938614|gb|EGG34997.1| ABC transporter, substrate-binding protein, family 3 [Paenibacillus sp. HGF5] Length = 256 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 48/284 (16%), Positives = 104/284 (36%), Gaps = 34/284 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG--FLKCGINTGLVGFAEVKANGDWKG 58 M K S+L +L T ++S G L GI+ + + G Sbjct: 1 MVKKI-ASVLAGFMLLLTVVGCSSS------ASGGNELVVGIDDKFAPMGFRDESNEIVG 53 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD+D+ RA + + + +++ P++ K + L S +ID++ T R+ + Sbjct: 54 FDIDYARAAAEKMGKE---VKFQPIDWKAKESELSSGRIDLIWNGYTITDERKEKVLF-- 108 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + Q + I+++ L+G + +Q+ ++ L+ H + F Sbjct: 109 TKPYLENSQVVAVLNDSDIATIGDLAGKQVGLQSLSSAADALSANA-IHEQVKNISEFPD 167 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + + R DA D + + + IL + ++ + +G+ E Sbjct: 168 NVLALSDLKNGRVDAVIIDEVVMKYYMSKEE--GTYKILEESLAPEQYGIGVKKGNEELL 225 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV-QRFLGIDK 281 + QK ++ ++ D T + +++ G DK Sbjct: 226 ESL----------------QKALDDMNADGTAAKISEKWFGEDK 253 >gi|217963588|ref|YP_002349266.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Listeria monocytogenes HCC23] gi|217332858|gb|ACK38652.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Listeria monocytogenes HCC23] gi|307571836|emb|CAR85015.1| amino acid ABC transporter, amino acid-binding/permease protein [Listeria monocytogenes L99] Length = 486 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 53/278 (19%), Positives = 107/278 (38%), Gaps = 24/278 (8%) Query: 1 MYKDF---FVSILCLIILFFTSFST------NASILGDIKKRGFLKCGINTGLVGFAE-- 49 M K F +IL + I+ F+ F+T L I+++G L G++ + Sbjct: 1 MQKHLLQKFAAILLVFIVVFSGFTTVFAADTEDQTLAKIQEKGVLTVGLSADYPPYEFHQ 60 Query: 50 -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + GFDV + ++ + K++ +N +L++ +ID++ T Sbjct: 61 TIDGKDKVVGFDVSIAKKIAKNL---NVKLEIKEMNFDSLLGSLKTGKIDMIISGMSPTP 117 Query: 109 LREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 R+ + F Q ++ K K +SV+ SG + Q TT E + + Sbjct: 118 ERQKEVDF--SDPYMFVQQRVVIRKTDKDKFTSVNDFSGVKVGAQKQTTQE----ELAQN 171 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + ++V ++ ++++ DA + A + + I SK Sbjct: 172 ELVGSEVVSLQKVPDLILNLKSNKVDAVVLEGPVAEAYISQDKTLAMADIKFANGSKET- 230 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 A A+ +G T V+ + + L QK N++ Sbjct: 231 AIAMPKGSTALQEKVNASIKDIQDTGLLKKYQKEANKL 268 >gi|222153139|ref|YP_002562316.1| amino acid ABC transporter extracellular amino acid-binding protein [Streptococcus uberis 0140J] gi|222113952|emb|CAR42208.1| putative amino acid ABC transporter, extracellular amino acid-binding protein [Streptococcus uberis 0140J] Length = 277 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 39/271 (14%), Positives = 85/271 (31%), Gaps = 13/271 (4%) Query: 1 MYKDFFVSILCLIILFFTSF----STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 + K ++ LF + + KK + G + V +G Sbjct: 3 LKKILLTTLALASTLFLVACGKSSAAKTDQWDTYKKEKSITLGFDNTFVPMGFKDESGKN 62 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFDV+ +A+ K+++ P+N + L++ +ID++ T R+ + Sbjct: 63 TGFDVELAKAVFQEYG---IKVKFQPINWDLKETELKNGKIDMIWNGYSVTKERQAKVAF 119 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI-- 174 + Q + K I+S + + G + Q+G++ K Sbjct: 120 --STPYMKNEQVLVTKKSSNITSFAAMKGKVLGAQSGSSGYDAFTSNPKVLKDIVKDKDA 177 Query: 175 -VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 +E + + R D D + + I+ A + + Sbjct: 178 TQYETFTQAFIDLKNDRIDGLLIDKVYANYYLKQEGELTNYNIVKSEFDGEDFAVGVRKE 237 Query: 234 DTEWYNIVSWTHYAMVTAEELG-ITQKNINQ 263 D ++ + + I+QK + Sbjct: 238 DKTLLKNINSAFTKLYKNGKFQEISQKWFGE 268 >gi|326693635|ref|ZP_08230640.1| amino acid ABC transporter periplasmic protein [Leuconostoc argentinum KCTC 3773] Length = 284 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 43/263 (16%), Positives = 81/263 (30%), Gaps = 18/263 (6%) Query: 5 FFVSILCLIILFFTSFS----------TNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54 FV ++ + +S + T IKK + G++ V G Sbjct: 17 LFVGVVIWAAMSLSSGAKRTAQNEQQTTQTEDWARIKKAKQITIGLDDTFVPMGFRDKEG 76 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + GFDVD A+ + K+++ P++ + L + ID + T RE + Sbjct: 77 NIVGFDVDLATAVFKTMG---IKVKWQPIDWSMKETELNTGNIDAIWNGYTVTKAREKQV 133 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + Q + KK I+ S + + Q ++ + Y K Sbjct: 134 AF--SKPYHKATQVLVTLKKNNINRFSDMKDKVLGDQTASSGDEGFNKYPKVLKQYVKDQ 191 Query: 175 V---FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 ++ ++ A R D D P ++ + +A Sbjct: 192 QVVGYDTFDKAFNDLNAGRIDGLLIDEDYARYYVAHQPNPKDYTVTVGDFPIDQMAVGFR 251 Query: 232 QGDTEWYNIVSWTHYAMVTAEEL 254 + D + V T A L Sbjct: 252 KSDNQLREAVDQTLAAFKKDGRL 274 >gi|238784713|ref|ZP_04628717.1| Cystine-binding periplasmic protein [Yersinia bercovieri ATCC 43970] gi|238714392|gb|EEQ06400.1| Cystine-binding periplasmic protein [Yersinia bercovieri ATCC 43970] Length = 253 Score = 139 bits (351), Expect = 6e-31, Method: Composition-based stats. Identities = 48/258 (18%), Positives = 85/258 (32%), Gaps = 14/258 (5%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 V++ L S++ +L +K+RG L G+ F+ +G GF+VDF Sbjct: 1 MVAVALATGLNVKSYAA-GDLLNQVKERGTLIVGLEGTYPPFSFQGEDGKLTGFEVDFAN 59 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 AL+ + K + P +L+SK+ID+ + R+ Sbjct: 60 ALAEHMG---IKAKITPTKWDGMLASLESKRIDVAINQVTISDERKKKYDF--STPYTVS 114 Query: 126 GQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 G + K + L G + V G+ E L + K ++ Sbjct: 115 GIQVLTKKGNEGNFTKPEDLEGKKVGVGLGSNYEQWLRENLK----GVDIRTYDDDPTKY 170 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 R R DA D L AL L + + ++ A+ + + E ++ Sbjct: 171 QDLRVGRTDAILVDR--LAALDLVKKTNNTLAVAGPAFARQESGVALRKDNPELLAAINQ 228 Query: 244 THYAMVTAEELGITQKNI 261 M L + Sbjct: 229 AIAEMQKDGTLAKISEKY 246 >gi|225076270|ref|ZP_03719469.1| hypothetical protein NEIFLAOT_01310 [Neisseria flavescens NRL30031/H210] gi|224952394|gb|EEG33603.1| hypothetical protein NEIFLAOT_01310 [Neisseria flavescens NRL30031/H210] Length = 267 Score = 139 bits (351), Expect = 6e-31, Method: Composition-based stats. Identities = 52/279 (18%), Positives = 97/279 (34%), Gaps = 18/279 (6%) Query: 1 MYKDFFVSILCLIILFFTSF--STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K ++ C + S NAS D + G N F + + G +G Sbjct: 3 MKKWLATALACSALALTACGGQSNNASTPAD----KVYRVGSNAEFAPFESLDSAGKVEG 58 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD A++ A K+++ + F +L + +DI+ T R+ S+ Sbjct: 59 FDVDLMDAMAKA---GNFKVEFKHQPWESLFPSLNNGDVDIVMSGVTITDDRKQSMLF-- 113 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSG-ASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + Q ++ K K ++S L A + V G T + +++ N FE Sbjct: 114 SDPYFEITQVVLVPKGKKVASSEDLKNMAKVGVVTGYTGDFSVSKLLG--NDNPKIARFE 171 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS-EHVILPDIISKSPLAPAIIQGDTE 236 V I D+ D + + N + + LPD + A +GD Sbjct: 172 SVPLIIKELENGGLDSVVSDSAVIANYVKNNPTKGLDFISLPD-FTIENYGIAARKGDEA 230 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 +++ + + E +K+ + + Sbjct: 231 TIKMLNDALKKVRESGEYDKIYAKY--FAKEGEKAEAAK 267 >gi|170696517|ref|ZP_02887641.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] gi|170138564|gb|EDT06768.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] Length = 274 Score = 139 bits (351), Expect = 6e-31, Method: Composition-based stats. Identities = 43/251 (17%), Positives = 91/251 (36%), Gaps = 16/251 (6%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 L S + +A L +I K G ++ G+ F + + G+D+D + A+ Sbjct: 29 ALSAFSPAAHADALDNIAKTGTVRIGVFMDYPPFGSIGPDMKPMGYDIDVAHLIGRAL-- 86 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 +K++ + + R L + D+L + T RE + + Y+ K Sbjct: 87 -NAKVELVQVTGDNRMAYLADHKTDMLL-SVGQTPEREKVIDFSKPYAPYY--LAVFGPK 142 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 + + + L+G SI V GT +L++ + F+ +A+ + + Sbjct: 143 ALPVKNAADLAGKSISVARGTLEDLSVTKIAP---PSANIKRFDDPNGAISAFISGQVQL 199 Query: 194 YT--GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 D+ A + + P + + SP + + + V T + Sbjct: 200 MVVGNDVGATILARHPANDPEQ----KFSLFSSPDHVGLNKNEPRLKQKVDETIAKARSD 255 Query: 252 EELG-ITQKNI 261 + I+QK + Sbjct: 256 GTMNAISQKWL 266 >gi|34556715|ref|NP_906530.1| binding protein component ABC transporter [Wolinella succinogenes DSM 1740] gi|34482429|emb|CAE09430.1| BINDING PROTEIN COMPONENT ABC TRANSPORTER [Wolinella succinogenes] Length = 267 Score = 139 bits (351), Expect = 6e-31, Method: Composition-based stats. Identities = 48/272 (17%), Positives = 96/272 (35%), Gaps = 18/272 (6%) Query: 1 MYKDFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K +L L + + + S L I KRG L+ + G F G+ GF Sbjct: 1 MKKILLGILLALGVAWAADMALWEKSTLNAIIKRGELRVSTDPGYYPFEMKDKKGNVIGF 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D R ++ A+ K+ + + L + + D++ T R + + Sbjct: 61 DIDIAREMAKAMG---VKLVIVQGSFDSLISGLLTDKADLILAGMTITPERNLKVAF--S 115 Query: 120 PITYFDGQGFIMHKK--KGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIV 175 + GQ ++ + + + L ++ + G T E+ K +K Sbjct: 116 NPYFTIGQTLLVRPDLKEKVKNYKDLDKPEYTVVTKLGVTGEIVARRMMKNAKIK----T 171 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 ++ E + DA+ D + V L I+ PL A+ +GD Sbjct: 172 YDTEAEAVQEVLNGKADAFIYDFPFNSTFMMQ-KGKGLLVHLDQSITYEPLGIALKKGDP 230 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 ++ +W ++ + + G + + D Sbjct: 231 DFL---NWLNHFLAQIKHDGTYDELYERWFVD 259 >gi|227552458|ref|ZP_03982507.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecium TX1330] gi|257896808|ref|ZP_05676461.1| extracellular solute-binding protein [Enterococcus faecium Com12] gi|293378563|ref|ZP_06624726.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecium PC4.1] gi|227178404|gb|EEI59376.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecium TX1330] gi|257833373|gb|EEV59794.1| extracellular solute-binding protein [Enterococcus faecium Com12] gi|292642892|gb|EFF61039.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecium PC4.1] Length = 271 Score = 139 bits (351), Expect = 6e-31, Method: Composition-based stats. Identities = 41/257 (15%), Positives = 84/257 (32%), Gaps = 11/257 (4%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 ++ +A I + + G++ V +G GFD+D +A+ Sbjct: 21 SNKKASADNWAAINEEKKIVIGLDDTFVPMGFRDKDGKLTGFDIDLAKAVFEQYG---IT 77 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 + + P++ + L + ID++ T RE + + Q I K+ GI Sbjct: 78 VDFQPIDWSMKEFELNNGTIDLIWNGYSKTPAREKKVQF--TKPYMENDQVLITPKESGI 135 Query: 138 SSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 +S Q+ + Q G++ + K ++++ E ++ R D Sbjct: 136 TSFEQMKNKRLGAQNGSSGYDVFTKQPEVLKERVKNQDAVLYDSFNEALIDVKSGRIDGL 195 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D + + + A + + D V + A E+ Sbjct: 196 LMDKVYADYYLKQRNELEDFNMTKGSYESEDFAVGVRKSDDTL---VKKINEAFDRLEKT 252 Query: 255 GITQKNINQVSKDTTNP 271 G QK N+ + P Sbjct: 253 GEFQKISNKWFGEDVTP 269 >gi|239816390|ref|YP_002945300.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] gi|239802967|gb|ACS20034.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] Length = 268 Score = 139 bits (351), Expect = 6e-31, Method: Composition-based stats. Identities = 44/242 (18%), Positives = 80/242 (33%), Gaps = 11/242 (4%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 +A + DIKK+G + G+ + A G+D D R L+ K + Sbjct: 30 ASAQSVADIKKKGEITIGMLVDFPPYGTTNAQNQPDGYDADVARLLAKDWG---VKANIV 86 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 P+ R L + ++D+L + T R + + K I + Sbjct: 87 PVTGPNRIPFLLTNKVDLLVASLAITPERAKQVQFSQ--PYAAATIVLYGATKAPIKAAG 144 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L G + V +T ++ + KA F+ A + + DA S Sbjct: 145 DLKGLRVGVARASTQDVAVT---KAAPEGTEIRRFDDDASAMQALISGQVDAI--GCSVT 199 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQKN 260 A ++ P+ + + + A+ G E V+ EL + QK Sbjct: 200 VAAQIAKRVPAGTYENKFTLVQQSMGIAMRPGQEELTKAVNEFVAKNTANGELNKLYQKW 259 Query: 261 IN 262 + Sbjct: 260 LQ 261 >gi|295112703|emb|CBL31340.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Enterococcus sp. 7L76] Length = 190 Score = 139 bits (351), Expect = 6e-31, Method: Composition-based stats. Identities = 39/184 (21%), Positives = 71/184 (38%), Gaps = 19/184 (10%) Query: 1 MYKD----FFVSILCLIILFFTSFSTNAS------------ILGDIKKRGFLKCGINTGL 44 M K +S+L L + S N + +KK G +K G+ + Sbjct: 1 MKKQNKWLAGLSLLVLAGIIVGCGSGNNDSTSKSASSNKTVTVEQLKKAGKIKVGVKEDI 60 Query: 45 VGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103 F + + +G + D R ++ I ++++ + AK R L + ++D++ Sbjct: 61 PNFGYMNPDTNKNEGMEPDIARLIAKEITGSEENVEFVGVTAKTRGPLLDNGELDMVIAT 120 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163 T R+ + Y D GF++ K+ SS+ L G +I V TT+ L Sbjct: 121 FTITDERKKTYNF--TTPYYTDEIGFLVRKEDNFSSMKDLDGKTIGVAQSATTKENLEKK 178 Query: 164 FKAH 167 K Sbjct: 179 RKRK 182 >gi|94986288|ref|YP_605652.1| extracellular solute-binding protein [Deinococcus geothermalis DSM 11300] gi|94556569|gb|ABF46483.1| amino acid ABC transporter substrate-binding protein, PAAT family [Deinococcus geothermalis DSM 11300] Length = 272 Score = 139 bits (351), Expect = 6e-31, Method: Composition-based stats. Identities = 45/253 (17%), Positives = 93/253 (36%), Gaps = 13/253 (5%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 + L +L + A L IK G + G F + GF+ + AL+ Sbjct: 25 TVLLTLLACALGTAAARDLAAIKASGTIYVGTEPTYAPFTYTQGK-KIVGFEAELAEALA 83 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 + K+++ P + L + D++ + T R+ ++ A ++ G Sbjct: 84 KRMG---VKVEWRPSAFDTLLIGLNQDRFDMVISSHGITPERQKAVDFAH---PHYCSGG 137 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 I+ ++ G +V L G ++ VQ GTT ++K +P + + Sbjct: 138 VILARENGPLTVDALQGKTVAVQLGTTYAQRAQKLPGLSSVKTYP----TNADALQMLLS 193 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 R DA+ D AL+ P + L ++ + + A+ +G+T + ++ M Sbjct: 194 GRVDAFITDR--FVALEARKKFPQAGLKLGQLLFQEKIGIAVKKGNTPLVSAINQALQGM 251 Query: 249 VTAEELGITQKNI 261 + + Sbjct: 252 LNDGSYKKLSEKY 264 >gi|113869258|ref|YP_727747.1| ABC transporter periplasmic protein [Ralstonia eutropha H16] gi|113528034|emb|CAJ94379.1| ABC-type transporter, periplasmic component: PAAT family [Ralstonia eutropha H16] Length = 261 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 38/252 (15%), Positives = 82/252 (32%), Gaps = 7/252 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++ + LF A+ + G++ N + GFD Sbjct: 1 MKKIAALLLISSVALFAACGKKEAASAAGADTATKIIVGLDDNFPPMGFRDNNNELVGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + S + +++ P++ + L K++D+L T R+ ++ Sbjct: 61 IDMAKEASRRLG---MTVEFKPIDWSAKEAELNGKRVDVLWNGLTITEERKKNISF--TA 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Q I+ + + + L+G + Q G++ + + F Sbjct: 116 PYMTNHQIVIVGASSPVKAKADLAGRIVGAQDGSSAVDAIKKESQVAASLKELKTFGDNV 175 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 R DA D + L + R E+ +L + + + D E Sbjct: 176 TALMDLSTGRLDAIVVD--EVVGRYLISKRAGEYKVLEENFGTEEYGVGVRKDDAELLGK 233 Query: 241 VSWTHYAMVTAE 252 + T +M Sbjct: 234 LDKTLASMKQDG 245 >gi|261381399|ref|ZP_05985972.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria subflava NJ9703] gi|284795613|gb|EFC50960.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria subflava NJ9703] Length = 267 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 55/274 (20%), Positives = 97/274 (35%), Gaps = 17/274 (6%) Query: 1 MYKDFFVSILCLIILFFTSF--STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K ++ C + S NAS D + G N F + + G +G Sbjct: 3 MKKWLATALACSALALTACGGQSNNASAPAD----KVYRVGSNAEFAPFESLDSAGKVEG 58 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD A++ A K+++ + F +L + +DI+ T R+ S+ Sbjct: 59 FDVDLMNAMAKA---GNFKVEFKHQPWESLFPSLNNGDVDIVMSGVTITDDRKQSMLF-- 113 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSG-ASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + Q ++ K K +SS L A + V G T + +++ N FE Sbjct: 114 SDPYFEITQVVLVPKGKKVSSSEDLKNMAKVGVVTGYTGDFSVSKLLG--NDNPKIARFE 171 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS-EHVILPDIISKSPLAPAIIQGDTE 236 V I D+ D + + N + + LPD + A +GD Sbjct: 172 SVPLIIKELENGGLDSVVSDSAVIANYVKNNPTKGLDFISLPD-FTIENYGIAARKGDEA 230 Query: 237 WYNIVSWTHYAMVTAEEL-GITQKNINQVSKDTT 269 +++ + + E I K + + T Sbjct: 231 TIKMLNDALKKVRESGEYDKIYAKYFAKEGEKTE 264 >gi|163856729|ref|YP_001631027.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Bordetella petrii DSM 12804] gi|163260457|emb|CAP42759.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Bordetella petrii] Length = 262 Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats. Identities = 38/253 (15%), Positives = 82/253 (32%), Gaps = 8/253 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K V + C L + + + G++ N GF Sbjct: 1 MKKLTAVFLACATSLLAACGQGDDPAPQASAPAARKIVVGLDDNFPPMGFRDENNQLVGF 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D R + + ++++ P++ + L K++D L T R+ ++ Sbjct: 61 DIDMAREAARRMG---IEVEFKPIDWSAKEAELNGKRVDALWNGLTITEERKKNIAF--T 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Q ++ + + + + L+G + Q G++ + + +F Sbjct: 116 APYMANHQIILVAQASPVQNKADLAGRVVGAQDGSSAVDAIKKDAQVAASLKELKLFGDN 175 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 A R DA D + L + R ++ +L + + + D E Sbjct: 176 VTALMDLSAGRLDAVVVD--EVVGRYLASKRAGQYRVLDENFGTEDYGVGLRKDDAELLA 233 Query: 240 IVSWTHYAMVTAE 252 + T AM Sbjct: 234 KLDQTLDAMKKDG 246 >gi|320535311|ref|ZP_08035431.1| bacterial extracellular solute-binding protein, family 3 [Treponema phagedenis F0421] gi|320147843|gb|EFW39339.1| bacterial extracellular solute-binding protein, family 3 [Treponema phagedenis F0421] Length = 273 Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats. Identities = 47/253 (18%), Positives = 91/253 (35%), Gaps = 15/253 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS--------ILGDIKKRGFLKCGINTGLVGFAEVKA 52 M K F + L +I + ++ GF+ G+ L Sbjct: 1 MKKIFTIFFLIFLISSCQKNLKSDEEKNAYTDVSFDKVRVNGFITVGVGDPLPPLISYSL 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 +G G+D+D A + + KI+ ++ E+ L S ++D ++ T RE Sbjct: 61 SGYMVGYDIDLLEAAAKKLH---LKIKVKAISWDEKEAILDSGEVDCIASGLSITPDRE- 116 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 AF D Q + I + L I +Q G+T L ++ + KY Sbjct: 117 -EIYAFTQPYLKDAQVIVTLDSAAIFTFDDLVDKCIGIQKGSTAAGLLKEHLEEKAGKYS 175 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + + ++ A + DA ++ +Y++ L RP + I + ++ A Sbjct: 176 ILELDEFMDLLVALENKKTDAIVVNLLTIYSMILREHRP--YRIFDEPLATDYYAFGFRH 233 Query: 233 GDTEWYNIVSWTH 245 D + ++V Sbjct: 234 KDIKLRDMVQKAL 246 >gi|259046943|ref|ZP_05737344.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding protein [Granulicatella adiacens ATCC 49175] gi|259036386|gb|EEW37641.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding protein [Granulicatella adiacens ATCC 49175] Length = 282 Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats. Identities = 48/287 (16%), Positives = 102/287 (35%), Gaps = 21/287 (7%) Query: 1 MYKDF----FVSILCLIILFFTSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAEVK 51 M K ++++ + ++ + A +++ + G + V + Sbjct: 1 MKKRKGILGLLALVGVAVMTLAGCTQLASNPKVDNWDKYQQQKSITVGFDNTFVPMGFEE 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 NGD+ GFD++ + +S + + + P++ + LQ+ ID + T R Sbjct: 61 KNGDYAGFDIELAQYVSKKLG---ITVHFQPIDWDMKETELQNGTIDAIWNGYSATDERR 117 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY---FKAHN 168 + + Q ++ K GI S S ++G ++ Q G++ L ++ K Sbjct: 118 EKVAFTI--PYMQNTQILVVKKTSGIHSASDMTGKALGAQNGSSGMLDFEEHPEVLKNRV 175 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 ++ V E + R DA D T E+ +P A Sbjct: 176 KGGDADQYQSVNEAIIDLKNDRIDALLIDRVYADYYLTTEGIADEYDTIPSGFESESFAV 235 Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQK-NINQVSKDTTNPDVQ 274 + D + ++ A + GI Q+ + +D P+V+ Sbjct: 236 GVRPADKKLLEALN---EAFKELYQEGIFQQISQKWFGEDVATPEVK 279 >gi|33592314|ref|NP_879958.1| solute-binding protein [Bordetella pertussis Tohama I] gi|33596427|ref|NP_884070.1| solute-binding protein [Bordetella parapertussis 12822] gi|33566196|emb|CAE37102.1| probable solute-binding protein [Bordetella parapertussis] gi|33571959|emb|CAE41480.1| probable solute-binding protein [Bordetella pertussis Tohama I] Length = 238 Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats. Identities = 46/239 (19%), Positives = 88/239 (36%), Gaps = 13/239 (5%) Query: 38 CGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96 CG F+ A G+DVD C+ ++ + K+ Y L+ R L + Sbjct: 3 CGTLGTSQPFSYQDAATRTVVGYDVDMCKLVADKLG---VKVNYKLLSVAARVPELNESR 59 Query: 97 IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT 156 +DIL+ N ++ R + +AF Y Q ++ K + ++ ++G + G+++ Sbjct: 60 VDILAANLGYSPER--AEQIAFSHTYYVSPQKLLVRKDSNLQTIESVNGRRVAATKGSSS 117 Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216 E + K + F A + + DA L L L + + I Sbjct: 118 EREIKRIL----DKSQVLGFTDSSASYLALQQKKVDAQFASELVLVRLMLQSPPTAPVSI 173 Query: 217 LPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 + + P + + +T + V+ AE G Q+ + T +QR Sbjct: 174 IDKAVFDEPWGLGMRKSETRFIAKVNEILD---QAEASGEAQRLFEKWFGAQTPYKLQR 229 >gi|325062203|gb|ADY65893.1| amino acid ABC transporter, substrate binding protein [Agrobacterium sp. H13-3] Length = 267 Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats. Identities = 54/252 (21%), Positives = 96/252 (38%), Gaps = 10/252 (3%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K+ V++ T+ S +A L +I RG +K G+ TG V G+ G+DVD Sbjct: 8 KNMTVAVGVAAATLATTTSAHAVSLSEITARGKVKIGVLTGAPPMGMVDEKGNPSGYDVD 67 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + S + ++ +PL R ALQ+ ++D L T R ++ Sbjct: 68 VANLIGSYLSLP---VELVPLTPPARIPALQTGKVDFLVATLAPTGERAKTVMFTQPYSA 124 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 + I K + ++ L G + V G++ E L KA+ +V+E Sbjct: 125 F--NMDIISGKDQKFENLDSLKGKRVSVNRGSSQETALR---KANVEGLEIVVYEDDSTS 179 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A A + DA + + RP + + + + A D E ++ Sbjct: 180 AQALLAGQVDAVALPSTV--GEAIIKQRPEAGLQVGFTFFQQGNSMATKIEDFELRQWLN 237 Query: 243 WTHYAMVTAEEL 254 + Y M + +L Sbjct: 238 TSIYLMKMSGDL 249 >gi|308067739|ref|YP_003869344.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain protein [Paenibacillus polymyxa E681] gi|305857018|gb|ADM68806.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain protein [Paenibacillus polymyxa E681] Length = 255 Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats. Identities = 43/285 (15%), Positives = 101/285 (35%), Gaps = 31/285 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L +++ + + K L GI+ N + GFD Sbjct: 1 MRKAAMFTMLIGLMMIVLAGCSGG------KDDSKLIIGIDDKFAPMGFRDENNELTGFD 54 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D+ +A + ++++ P++ + L S +ID++ T R+ + Sbjct: 55 IDYAKAAGEQMGK---QVEFQPIDWSAKESELNSGRIDLIWNGYTITDERKEKVLF--TK 109 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Q ++ +S +S L+G ++ +Q ++ L D F Sbjct: 110 PYLKNSQVIVVPATSSLSKLSDLAGKTVGLQTLSSAADAL-DANPIKGKLKQVSEFPDNV 168 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + R DA D + A + + +L + ++ + +G+ E Sbjct: 169 LALTDLKTGRLDAVVID--EVVAKYYMSKEQGTYKLLDESLAPEEYGIGVKKGNEELLTQ 226 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDV-QRFLGIDKSSN 284 + Q ++++ K+ ++ +++ G DK N Sbjct: 227 L----------------QSALDELHKNGKAAEISKKWFGEDKVLN 255 >gi|317133176|ref|YP_004092490.1| extracellular solute-binding protein family 3 [Ethanoligenens harbinense YUAN-3] gi|315471155|gb|ADU27759.1| extracellular solute-binding protein family 3 [Ethanoligenens harbinense YUAN-3] Length = 270 Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats. Identities = 55/256 (21%), Positives = 101/256 (39%), Gaps = 20/256 (7%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVD 62 S LC+ + S S++ L IKK G L G + F G DV+ Sbjct: 13 LASALCVTMASCKSSSSSTDKLDAIKKAGVLVVGTSADYPPFEFHKQQNGQDKIMGADVE 72 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 ++ I KIQ+ ++ ALQS +ID++ T RE ++ + + Sbjct: 73 IAEQIAKKIG---VKIQWQDMDFDGLLPALQSGKIDMIIAGMIDTPEREKAVDFSHK--Y 127 Query: 123 YFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y I+ K S +S LSG I VQ GTT + + + + + + + Sbjct: 128 YLSTDQAIIRKDDLSKYSKLSDLSGKHIGVQLGTTQQDDMKKWLPSGDY----VALGKDT 183 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI---IQGDTEW 237 ++ ++ + DA + + A N S+ V K+ PA+ D E+ Sbjct: 184 DLILELKSKKVDAVILEEPIVKAYVSQN---SDLVTANISFPKATQGPAVAVQKGNDKEF 240 Query: 238 YNIVSWTHYAMVTAEE 253 + ++ +V++++ Sbjct: 241 LSTINSVVDGLVSSKK 256 >gi|238027537|ref|YP_002911768.1| extracellular solute-binding protein, family 3 [Burkholderia glumae BGR1] gi|237876731|gb|ACR29064.1| Extracellular solute-binding protein, family 3 [Burkholderia glumae BGR1] Length = 264 Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats. Identities = 54/263 (20%), Positives = 94/263 (35%), Gaps = 18/263 (6%) Query: 12 LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI 71 + + + A +L +K+RG L+ G+ F GD G+DVD +A+++ + Sbjct: 15 IGASLVAATAHAADLLDQVKQRGTLRIGLEGTFPPFNSKSPQGDLVGYDVDIAKAVAAKL 74 Query: 72 FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131 P +++ LQ+ + D++ T R L F P + I Sbjct: 75 GVKP---EFVTTEWSGIIAGLQAGKFDVIVNQVGVTDKR--KEVLDFSPAYTYSAAQLIQ 129 Query: 132 HKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 K S+ L G + V G T + +A ++K +P E A Sbjct: 130 RKDDPRQFKSLDDLKGKKLGVGLG-TNYMDMAKSVPGIDVKTYPGA----PEYLRDLAAG 184 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 R DA D L L + P + + P A +G+ ++ + AM Sbjct: 185 RLDAALNDRLMLAYLLKNSQLP--LRTGATLQAGEPSAIPFKKGNPKFAKAIDD---AMT 239 Query: 250 TAEELGITQKNINQVSK-DTTNP 271 E G K ++ D + P Sbjct: 240 QLEADGTFAKISDKWFGIDVSKP 262 >gi|269124459|ref|YP_003297829.1| extracellular solute-binding protein family 3 protein [Thermomonospora curvata DSM 43183] gi|268309417|gb|ACY95791.1| extracellular solute-binding protein family 3 [Thermomonospora curvata DSM 43183] Length = 279 Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats. Identities = 46/253 (18%), Positives = 93/253 (36%), Gaps = 14/253 (5%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 I + L+ G+ G + +G ++GFDVD R ++ + I ++ + R Sbjct: 35 ILDKSTLRIGVKADQPGLGLKRPDGTFEGFDVDVARYVAGRLGFAEEDITFVETPSSVRE 94 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASI 148 ALQ +++D++ T R+ + A Y Q ++ G + +V LSG + Sbjct: 95 QALQERRVDMIVATYSITAGRKTKVTFA--GPYYVAHQDTLVRAGDGAVRNVRDLSGRRL 152 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 C G+ + + + + + + + DA + D L Sbjct: 153 CKVTGSNSWRRVTE---ERKVPARLVETSSYSDCVNRLLSGELDAVSTDDLILAGFAARY 209 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 I+ IS + + D + ++ M + G ++ +++ T Sbjct: 210 G--DRVKIINAPISDEKYGIGLHKSDIDGCEAINTALTQMY---QDGTARRLLDKWFGRT 264 Query: 269 ---TNPDVQRFLG 278 TNP V +F G Sbjct: 265 SLRTNPYVPQFEG 277 >gi|331701269|ref|YP_004398228.1| ABC transporter periplasmic subunit [Lactobacillus buchneri NRRL B-30929] gi|329128612|gb|AEB73165.1| ABC-type transporter, periplasmic subunit family 3 [Lactobacillus buchneri NRRL B-30929] Length = 287 Score = 139 bits (350), Expect = 8e-31, Method: Composition-based stats. Identities = 41/253 (16%), Positives = 84/253 (33%), Gaps = 10/253 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 + K+ + G++ V +G G+DVD RA+ K+ + P++ Sbjct: 39 DTWSTVSKQKRIVVGLDDSFVPMGFQTKSGKIVGYDVDLARAVFKQYG---IKVDFQPID 95 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 L++ ID++ R + + + Q + K + I+S + + Sbjct: 96 WSMNVTELRNGTIDLIWNGFSINPQRAKKITFSE--PYLINDQVLVSKKNQHINSFADMK 153 Query: 145 GASICVQAGTTTEL---TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 G VQ+G+ + K + PI+++ + A+R D Sbjct: 154 GKVAGVQSGSAGAMDIDNQPKLLKDKIKGHEPILYDTFTDAFIDLNANRIQGLLIDSIYA 213 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 S +P K + +GDT + + EL + N+ Sbjct: 214 GYYLEHQPNQSSFKSIPSEFPKEEYGVGMRKGDTVLKRKIDQGLNRLAKNGEL--HKINM 271 Query: 262 NQVSKDTTNPDVQ 274 D +P ++ Sbjct: 272 KWFGTDRDSPLIK 284 >gi|331270073|ref|YP_004396565.1| amino acid ABC transporter periplasmic amino acid-binding protein [Clostridium botulinum BKT015925] gi|329126623|gb|AEB76568.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Clostridium botulinum BKT015925] Length = 265 Score = 139 bits (350), Expect = 8e-31, Method: Composition-based stats. Identities = 50/276 (18%), Positives = 95/276 (34%), Gaps = 23/276 (8%) Query: 5 FFVSILCLIILFFTSFSTNA--------SILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 ++ + L++L S S ++ + L +K G L+ G++ + Sbjct: 1 MLITTMGLMLLSGCSSSKHSLGRQSGEDNSLKCMKSSGKLRIGLDDSYPPMEFRDEKNNL 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFD+D ++ + K++++ L LQSK+ D + T R+ S+ Sbjct: 61 IGFDIDLSNEIAKKLG---VKVEFVTTEFNGILLGLQSKKFDAIIAGFSITEDRKKSVNF 117 Query: 117 AFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 GQ + K I +S L + Q G+ + K Sbjct: 118 --SDPYVLGGQVIAVKKGNTSIKKLSDLKYKIVGCQMGSNGQNCAEKNLKDIK---ELRK 172 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + ++ + + R DA D + P E +L +++ K P+ A GD Sbjct: 173 YSKITQAFSDMAIGRIDAVIMDAQV--GGYYLSKNPGEFEVLNEMVVKQPMGIAFKIGDN 230 Query: 236 EWYNIVSWTHYAMVTAEELGITQK-NINQVSKDTTN 270 N V ++ GI K ++ D Sbjct: 231 ALKNEVQKIVN---DLKKEGILSKLSLKWFGFDAYK 263 >gi|326803632|ref|YP_004321450.1| ABC transporter, permease protein [Aerococcus urinae ACS-120-V-Col10a] gi|326651009|gb|AEA01192.1| ABC transporter, permease protein [Aerococcus urinae ACS-120-V-Col10a] Length = 497 Score = 139 bits (350), Expect = 8e-31, Method: Composition-based stats. Identities = 43/278 (15%), Positives = 97/278 (34%), Gaps = 20/278 (7%) Query: 1 MYKDFFVSILCLIILFFTSF--------STNASILGDIK---KRG-FLKCGINTGLVGFA 48 + K + V ++ L+ + + + ++ KRG + G++ Sbjct: 7 LKKSWIVMVIALVTILGLVTNHHVEAEEAAPQERMESVEEGPKRGDKVVIGLDDTFAPMG 66 Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + GFD+D +A++ ++ + P++ + L S ID+L T Sbjct: 67 FRNGQNEIVGFDIDLAQAIAEIYG---WELDFQPIDWAMKETELNSGNIDLLWNGVGITP 123 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA-- 166 RE + + + I K I +S L G +I Q+G+TT + + Sbjct: 124 EREEQMLFSQ--PYFESPNIVITKKGSPIKELSDLVGKTISTQSGSTTAEDIKGWPNQLY 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + P+++ E+ A + R DA D + + + + + Sbjct: 182 QKLAQKPVLYSSYNEVFADLDSGRVDAVVTDYTYGHYIMEVRGEEKYDSFVDPSKEPEQM 241 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQKNINQ 263 A A+ + + ++ + + + I K + Sbjct: 242 AVAMRKSASGLKTMIDQGLDQVKASGKYDEIVAKWFGE 279 >gi|260889730|ref|ZP_05900993.1| amino acid ABC transporter, amino acid-binding protein [Leptotrichia hofstadii F0254] gi|260860336|gb|EEX74836.1| amino acid ABC transporter, amino acid-binding protein [Leptotrichia hofstadii F0254] Length = 215 Score = 139 bits (350), Expect = 8e-31, Method: Composition-based stats. Identities = 41/224 (18%), Positives = 86/224 (38%), Gaps = 12/224 (5%) Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 G+ GFD+D +A++ + S++++ P+N + L L ID++ Sbjct: 1 MGFKDEKGEIVGFDIDLAKAVAQKLG---SEVEFKPINWDSKILDLNGGNIDLIWNGLTI 57 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T R+ + + Q ++ I++ + L+G ++ Q ++ E + Sbjct: 58 TEERKKETEM--TKPYFTSHQLIVVKAGSSINTKADLAGKNVGSQTESSGEEAVKKSGDD 115 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND---RPSEHVILPDIISK 223 K + + ++ A R DA D K T + + + IL D + Sbjct: 116 KKFK-EFKTYAQYDQAFMDLDAGRVDAIIADEVLAKYTKKTKETQAKKELYQILNDNYGE 174 Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 A +G+T+ ++ A+ + G QK ++ KD Sbjct: 175 EEYGIAAKKGNTKLIEAIN---KAIEELKADGTYQKIYSKWFKD 215 >gi|300858066|ref|YP_003783049.1| glutamate ABC transporter substrate-binding protein [Corynebacterium pseudotuberculosis FRC41] gi|300685520|gb|ADK28442.1| glutamate ABC transport system substrate-binding protein [Corynebacterium pseudotuberculosis FRC41] gi|302205788|gb|ADL10130.1| glutamate-binding protein GluB [Corynebacterium pseudotuberculosis C231] gi|302330347|gb|ADL20541.1| glutamate-binding protein GluB [Corynebacterium pseudotuberculosis 1002] gi|308276023|gb|ADO25922.1| glutamate-binding protein GluB [Corynebacterium pseudotuberculosis I19] Length = 293 Score = 139 bits (350), Expect = 8e-31, Method: Composition-based stats. Identities = 47/279 (16%), Positives = 97/279 (34%), Gaps = 25/279 (8%) Query: 6 FVSILCLIILFFTSFSTN-------ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 F+ + +L T+ + A +LG I + G + G G +A+G G Sbjct: 8 FLGASAIALLSATTLAACGGNNNDGAGLLGHI-ESGQVTLGTKFDQPGLGMKEASGGMSG 66 Query: 59 FDVDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 DVD + + + I D +++ + +R +Q+ ++D+++ R ++ Sbjct: 67 LDVDIAQYVVNHIADTKGWKHPDVEWRETPSAQRESLIQNGEVDLIAATYSINKSRAETV 126 Query: 115 GLAFRPITYFDGQGFIMHK-KKGISSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYH 172 Q + K GI V L G +C +G+T + + Sbjct: 127 NF--GGPYLLTHQALLTRKDDAGIKEVKDLEHGKILCSVSGSTPAQKVKESLP----GVQ 180 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL----PDIISKSPLAP 228 ++ A R DA T D + L N+ + V + + Sbjct: 181 LQEYDTYSSCVEALRQGNVDALTTDATILNGYAQQNEGSFKVVEMFKEDQTPYTDEYYGI 240 Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEE-LGITQKNINQVSK 266 + + D E V+ + ++ E + +KN+ + Sbjct: 241 GLKKDDAEATKAVNEALNQLNSSGEFEKLVKKNLGDAAA 279 >gi|195978015|ref|YP_002123259.1| amino acid ABC transporter extracellular-binding protein precursor [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195974720|gb|ACG62246.1| amino acid ABC transporter extracellular-binding protein precursor [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 278 Score = 139 bits (350), Expect = 8e-31, Method: Composition-based stats. Identities = 36/275 (13%), Positives = 85/275 (30%), Gaps = 16/275 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTN-----ASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 + K V++ + + + K++ + G + V +G Sbjct: 3 LKKTLLVALFAATATLLVACGASNKQTSSDAWDSYKQKKTITLGFDNTFVPMGYKDESGK 62 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFD++ +A+ K++Y +N + L + +ID++ T R+ + Sbjct: 63 NTGFDIELAKAVFDQYG---IKVKYQAINWDLKETELNNGKIDLIWNGYSVTKERQAKVA 119 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH--- 172 + Q + K ISS + + ++ Q+G++ + K Sbjct: 120 FTE--PYMKNEQVLVTQKSSQISSFADMKNKTLGAQSGSSGYDAFTSHPKVLKDLVKGND 177 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 +E + + R D D + I+ A + + Sbjct: 178 ATQYETFTQAFIDLKNKRIDGLLIDRVYANYYLQQEGELDRYNIIASEFEGEDFAVGVRK 237 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 D ++ ++ + G QK + + Sbjct: 238 ADKTLQKKITQALKSLY---QDGTFQKISKKWFGE 269 >gi|167031269|ref|YP_001666500.1| cystine transporter subunit [Pseudomonas putida GB-1] gi|166857757|gb|ABY96164.1| extracellular solute-binding protein family 3 [Pseudomonas putida GB-1] Length = 264 Score = 139 bits (350), Expect = 8e-31, Method: Composition-based stats. Identities = 49/244 (20%), Positives = 85/244 (34%), Gaps = 14/244 (5%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + L I+++G + G+ F+ NG GF+V+ L+ + K + Sbjct: 25 AFAGEQLKTIQEKGVINVGLEGTYPPFSFQDENGKLAGFEVELSELLAKELG---VKAKI 81 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK---GI 137 P AL+SK++D++ + R+ + P T Q I+ KK I Sbjct: 82 QPTKWDGILAALESKRLDVVVNQVTISEERKKKYDFSE-PYTVSGIQALILKKKAEQLNI 140 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 S L+G + V GT E + +E A R R DA D Sbjct: 141 KSAQDLAGKKVGVGLGTNYEQWVKQDVPKA----EVRTYEDDPSKFADLRNGRIDAILID 196 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 L AL+ + + D S+ A+ +G+ E ++ + L Sbjct: 197 R--LAALEYAQKA-KDTELAGDAFSRLESGVALRKGEPELLAAINKAIDKLKADGTLAKL 253 Query: 258 QKNI 261 + Sbjct: 254 SEKY 257 >gi|302388441|ref|YP_003824263.1| extracellular solute-binding protein family 3 [Clostridium saccharolyticum WM1] gi|302199069|gb|ADL06640.1| extracellular solute-binding protein family 3 [Clostridium saccharolyticum WM1] Length = 290 Score = 138 bits (349), Expect = 8e-31, Method: Composition-based stats. Identities = 49/297 (16%), Positives = 90/297 (30%), Gaps = 38/297 (12%) Query: 1 MYKDFFVSILCLIILFFTSFSTN------------------------ASILGDIKK---- 32 M K ++ + + + S A KK Sbjct: 1 MKKKILLAAVFGAAVLASGCSGQKNAVTASAASDPAASTTKESANETAKETEAGKKEEAG 60 Query: 33 RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92 G G + V NG++ GFD++ + +++ + K P+ + + L Sbjct: 61 TGTFTVGFDQDFPPMGFVGENGEYTGFDLELAQEVANRLGK---KFVPQPIAWDAKDMEL 117 Query: 93 QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQA 152 +S ID + T G + + Q F++ K I +++ LSG + VQA Sbjct: 118 ESGNIDCIWNGFTIT---GREEGYTWTKPYMENSQVFVVGKDSSIKTLADLSGKIVEVQA 174 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 ++ E L K DA D+ R + Sbjct: 175 DSSAEKALQSDEKLAGTFGTLQTTPDYNTAFMDLEMGAVDAIAMDVIVAAYQI--EQRKA 232 Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 + +IL + ++ +G+ + V AM L + KD T Sbjct: 233 DFIILDEALAAEEYGVGFKKGNETLRDQVQEQLEAMSADGTLKKISE--KWFGKDVT 287 >gi|163856809|ref|YP_001631107.1| periplasmic glutamine-binding protein [Bordetella petrii DSM 12804] gi|163260537|emb|CAP42839.1| periplasmic glutamine-binding protein [Bordetella petrii] Length = 247 Score = 138 bits (349), Expect = 8e-31, Method: Composition-based stats. Identities = 52/270 (19%), Positives = 98/270 (36%), Gaps = 25/270 (9%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M + ++ + + L + + +A L+ + V NG GF Sbjct: 1 MKTRRQLLTTVLALGLAWGAAPAHAQE--------TLRVVTDATFPPMEFV-KNGQRTGF 51 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D++ AL A+ KI+++ ++ K ALQ+ + D+ T R+ + Sbjct: 52 DIELIEALGQAMGK---KIEWIDIDFKGLIPALQAGRADMAVSAIYITDARKQVVDF--T 106 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G + K I S+ L G + VQ GT + +Y K H + + E+ Sbjct: 107 DPYYAGGLVVLTRKDGPIKSLKDLDGRKVSVQVGTKSV----NYLKEHYPQVQRVEVEKN 162 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E+ + R DA A KL E +L + I+ A+ + E Sbjct: 163 QEMFNLVQVGRTDAAVTGKP---AAKLFAQNTPELTVLDEQITTEQYGIAVPKSKPELTA 219 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTT 269 ++ A+ + G K + + + Sbjct: 220 ALN---AALKKLKADGTYDKVVGKWFEAAP 246 >gi|83718424|ref|YP_442093.1| amino acid ABC transporter periplasmic amino acid-binding protein [Burkholderia thailandensis E264] gi|167580939|ref|ZP_02373813.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia thailandensis TXDOH] gi|167619034|ref|ZP_02387665.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia thailandensis Bt4] gi|257138279|ref|ZP_05586541.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia thailandensis E264] gi|83652249|gb|ABC36312.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia thailandensis E264] Length = 266 Score = 138 bits (349), Expect = 9e-31, Method: Composition-based stats. Identities = 54/277 (19%), Positives = 92/277 (33%), Gaps = 18/277 (6%) Query: 2 YKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 +K F S L +L + S +A +L +K+ G LK + F A+G +GFD Sbjct: 4 FKPMFTSALVAALLGIATASAHAADLLDSVKQAGVLKIALEGTYPPFDYRNADGQLEGFD 63 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + +++ + P Q++ LQ+ + D++ T R +L + Sbjct: 64 VDVAKEVAARLGVKP---QFVTTEWSGILAGLQAGKFDVIVNQVGITPARRQALDFSQPY 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + K + L G I V GT AD K + Sbjct: 121 VYSAAQLIQRADDKHDYGAPGALQGKRIGVTLGT----NFADLAKT-LQGVDVKTYPGAP 175 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTND---RPSEHVILPDIISKSPLAPAIIQGDTEW 237 E A R D D L L RP + + + +G+ ++ Sbjct: 176 EKLRDVAAGRIDVSMDDRLMLPYLIKNAHMPLRPGATIKGGET----QMGIPFRKGNPKF 231 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 + +M L ++ DT+ P Q Sbjct: 232 AKALDDALASMRADGTLKKIS--VHWFGVDTSTPSAQ 266 >gi|46908483|ref|YP_014872.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria monocytogenes str. 4b F2365] gi|226224858|ref|YP_002758965.1| amino acid ABC transporter, permease protein [Listeria monocytogenes Clip81459] gi|254825186|ref|ZP_05230187.1| his/Glu/Gln/Arg/opine ABC transporter permease [Listeria monocytogenes FSL J1-194] gi|254931637|ref|ZP_05264996.1| his/Glu/Gln/Arg/opine ABC transporter permease [Listeria monocytogenes HPB2262] gi|254992059|ref|ZP_05274249.1| amino acid ABC transporter, permease protein [Listeria monocytogenes FSL J2-064] gi|255519729|ref|ZP_05386966.1| amino acid ABC transporter, permease protein [Listeria monocytogenes FSL J1-175] gi|46881754|gb|AAT05049.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Listeria monocytogenes serotype 4b str. F2365] gi|225877320|emb|CAS06034.1| Putative amino acid ABC transporter, permease protein [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|293583191|gb|EFF95223.1| his/Glu/Gln/Arg/opine ABC transporter permease [Listeria monocytogenes HPB2262] gi|293594430|gb|EFG02191.1| his/Glu/Gln/Arg/opine ABC transporter permease [Listeria monocytogenes FSL J1-194] gi|328465831|gb|EGF37019.1| amino acid ABC transporter, permease protein [Listeria monocytogenes 1816] gi|328472142|gb|EGF43017.1| amino acid ABC transporter, permease protein [Listeria monocytogenes 220] Length = 486 Score = 138 bits (349), Expect = 9e-31, Method: Composition-based stats. Identities = 52/278 (18%), Positives = 105/278 (37%), Gaps = 24/278 (8%) Query: 1 MYKDFF---VSILCLIILFFTSFST------NASILGDIKKRGFLKCGINTGLVGFAE-- 49 M K +IL + I+ F+ F+T L I+++G L G++ + Sbjct: 1 MQKHLLQKIAAILLVFIVVFSGFTTVFAADTEDQTLAKIQEKGVLTVGLSADYPPYEFHQ 60 Query: 50 -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + GFDV ++ + K++ +N +L++ +ID++ T Sbjct: 61 TIDGKDKVVGFDVSIAEKIAKDL---DVKLEIKEMNFDSLLGSLKTGKIDMIISGMSPTP 117 Query: 109 LREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 R+ + F Q ++ K K +SV+ SG + Q TT E + + Sbjct: 118 ERQKEVDF--SDPYMFVQQRVVIRKTDKDKFTSVNDFSGVKVGAQKQTTQE----ELAQN 171 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + ++V ++ ++++ DA + A + + I SK Sbjct: 172 ELVGSEVVSLQKVPDLILNLKSNKVDAVVLEGPVAEAYISQDKTLAMADIKFANGSKET- 230 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 A A+ +G T V+ + + L QK N++ Sbjct: 231 AIAMPKGSTALQEKVNASIKDIQDTGLLKKYQKEANKL 268 >gi|325523433|gb|EGD01757.1| polar amino acid transporter substrate-binding protein [Burkholderia sp. TJI49] Length = 266 Score = 138 bits (349), Expect = 9e-31, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 93/257 (36%), Gaps = 14/257 (5%) Query: 17 FTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 FT+ + +A +L +KK G L+ G+ F +G +GFDVD A++ + Sbjct: 19 FTAVAAHAEDLLDSVKKAGVLRVGLEGTYPPFNSRGTSGQLEGFDVDVANAVAGKLG--- 75 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK- 134 K Q++P LQ+ + D++ T R+ +L + P TY Q Sbjct: 76 VKTQFVPTEWSGIIAGLQAGKFDVIVNQVTITPQRKEALDFSQ-PYTYSAAQLIQRKDDT 134 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 + S+ G + V GT D + E A R +A Sbjct: 135 RDFKSLEDFKGKKLGVTLGTNY-----DQMARAVPGIEVQTYPGAPEKLRDLAAGRIEAT 189 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D L + T++ P + + + +A +G+ ++ ++ ++ L Sbjct: 190 LDDRLMLPYMIKTSNLPLRPGAVLNGGKQE-MAIPFRKGNPKFEKAINDALTSLRNDGTL 248 Query: 255 GITQKNINQVSKDTTNP 271 ++ D T P Sbjct: 249 KKIS--MHWFGSDVTVP 263 >gi|78066165|ref|YP_368934.1| ABC polar amino acid transporter, periplasmic ligand binding protein [Burkholderia sp. 383] gi|77966910|gb|ABB08290.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia sp. 383] Length = 264 Score = 138 bits (349), Expect = 9e-31, Method: Composition-based stats. Identities = 56/276 (20%), Positives = 103/276 (37%), Gaps = 19/276 (6%) Query: 1 MYKDFFVSILCLIILFFT---SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M +L ++ + + + A +L +K+RG L+ G+ F G+ Sbjct: 1 MKIALLKKLLVAGLIGTSFAAATAHAADLLDQVKQRGTLRVGLEGTFPPFNSKNPQGELV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD +A+++ + K +++ LQ+ + D+++ T R+ +L + Sbjct: 61 GFDVDIAKAVAAKLG---VKAEFVTTEWSGIIAGLQAGKFDVIANQVGITDKRKETLDFS 117 Query: 118 FRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 TY Q + S+ L G + V G T + +A ++K +P Sbjct: 118 PA-YTYSSAQLIQRNDDTRQFKSLEDLKGKKLGVALG-TNYMDMAKSVPGIDVKTYPGA- 174 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E A R DA D L L + P ++ S +P +G+ + Sbjct: 175 ---PEYLRDLAAGRLDAALNDRLMLAYLTKNSQLP--LRPGANVGSANPSGIPFKKGNPK 229 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSK-DTTNP 271 + + AM E G K ++ D T P Sbjct: 230 FQKAIDD---AMAQLEADGTFTKISDKWFGIDVTKP 262 >gi|330838427|ref|YP_004413007.1| ABC-type transporter, periplasmic subunit family 3 [Selenomonas sputigena ATCC 35185] gi|329746191|gb|AEB99547.1| ABC-type transporter, periplasmic subunit family 3 [Selenomonas sputigena ATCC 35185] Length = 259 Score = 138 bits (349), Expect = 9e-31, Method: Composition-based stats. Identities = 47/269 (17%), Positives = 88/269 (32%), Gaps = 15/269 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59 M K ++ L F S + L+ G N F NG ++GF Sbjct: 3 MKKMLLGAVGLLAAASFAVAGCGGSGDSGSASK-TLRVGTNADFAPFEFQGENGKEYEGF 61 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D RA++ + +N AL SK IDI R+ ++ + Sbjct: 62 DMDLARAVAEEMGMTAD---IQNINFDGLIPALVSKNIDIAISGMTINDERKKNVLFSE- 117 Query: 120 PITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y G ++ K I+ L+G ++ VQ GTT+ + N Sbjct: 118 -PYYQSGLTIVVKKDNTDINGFKDLAGKTVAVQIGTTSAKEV-----KKNPDIQVKELNS 171 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + +A A D + + ++ ++++ A+ + + E Sbjct: 172 SADTFLELKAGGVQAVVNDRPVNDYYIAKSGE-KDVRVVNELLTSEDYGIAMAKDNQELQ 230 Query: 239 NIVSWTHYAMVTAEELG-ITQKNINQVSK 266 V + + I +K Q ++ Sbjct: 231 KKVDEALKKLKENGKYDEIYKKWFGQKAE 259 >gi|89898980|ref|YP_521451.1| extracellular solute-binding protein [Rhodoferax ferrireducens T118] gi|89343717|gb|ABD67920.1| extracellular solute-binding protein, family 3 [Rhodoferax ferrireducens T118] Length = 265 Score = 138 bits (349), Expect = 9e-31, Method: Composition-based stats. Identities = 48/264 (18%), Positives = 89/264 (33%), Gaps = 16/264 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M ++ + S +T A L I + + G+ + + + + Sbjct: 1 MKFKLLSTLAGVFASAVLSLATPAHAADDSLSSILAKKSIALGVASDFPPYGYMGPDFKL 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G DV + ++ + K + +P++ R LQ+K+ID++ RE + Sbjct: 61 TGVDVATAQLIADKLG---VKAELVPVSTPNRIPYLQTKKIDLIVSALGKNPEREKVIDF 117 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 +F Q K I S L+G SI V GT + L F Sbjct: 118 TVAYAPFF--QAVFGPKALSIKSFDDLAGKSIAVTRGTIQDDVLQKVAP---PTLKIQRF 172 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDT 235 E AA+ + + + A N + +E+ +L + SP + +G+T Sbjct: 173 EDDATTVAAFISQQTQLLATGAAVAAAAVQKNPQVQAEYKLL---LKDSPNFIGVRKGET 229 Query: 236 EWYNIVSWTHYAMVTAEELGITQK 259 V+ A L + Sbjct: 230 ALMTKVNEILLAAKADGTLEKYSQ 253 >gi|310829836|ref|YP_003962193.1| extracellular solute-binding protein family 3 [Eubacterium limosum KIST612] gi|308741570|gb|ADO39230.1| extracellular solute-binding protein family 3 [Eubacterium limosum KIST612] Length = 271 Score = 138 bits (349), Expect = 9e-31, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 95/248 (38%), Gaps = 31/248 (12%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 G++ + GFDVD + + +P + +N + L L S Sbjct: 43 TFVVGLDDSFPPMGFRDDQNNIVGFDVDLATEAAKRMGMEP---KMQVVNWDTKELELDS 99 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 ID + T RE ++ + + Q ++ K GI+ + L G ++ +Q G+ Sbjct: 100 GNIDAIWNGLSVTPEREEAMLM--TKPYLKNDQVIVVKKDSGITKKADLEGKNVGLQKGS 157 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA---HRCDAYTGDISALYALKLTNDRP 211 + D F+A ++ E +A + R DA D + A + Sbjct: 158 SAY----DAFEADDIHTKVAGMNEYPENVSALQDLGIGRIDAVIVDS--VVARYYISSEN 211 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 +++VIL + +S A A+ +G+TE G QK I+ + D T Sbjct: 212 ADYVILDESLSPETYAVAVKKGNTELQ----------------GKIQKAIDDMVADGTAA 255 Query: 272 DV-QRFLG 278 ++ +++ G Sbjct: 256 EISKKWFG 263 >gi|227529681|ref|ZP_03959730.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus vaginalis ATCC 49540] gi|227350471|gb|EEJ40762.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus vaginalis ATCC 49540] Length = 280 Score = 138 bits (349), Expect = 9e-31, Method: Composition-based stats. Identities = 52/293 (17%), Positives = 103/293 (35%), Gaps = 26/293 (8%) Query: 1 MYK-DFFVSILCLI--ILFFTSF------STNASILGDIKKRGFLKCGINTGLVGFAEVK 51 M K +++ +L LI I+F + + I++R + G++ V + Sbjct: 1 MRKIKYWLVLLALITPIIFLSGCESVTQRANTQDTWNRIERRKRVVIGLDDSFVPMGFRQ 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 NG G+DVD RA+ K + P++ + L++ ID+L R Sbjct: 61 KNGKLVGYDVDLARAVFKQYG---IKADFQPIDWSMKETELKNGTIDLLWNGYSINSSRR 117 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN--- 168 + + + Q + K I + + + G S+ VQ G+T L + KA Sbjct: 118 KKVAFSR--PYLKNEQILVTKKASNILNFAGMKGKSLGVQNGSTGLTALDERPKALKDLI 175 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI-LPDIISKSPLA 227 P++++ + A+R D S + + A Sbjct: 176 KNQKPVLYDTFPDAFIDLNANRIQGILMDQVYADYYIKHQKNSSSYRTYSSKELPVEYYA 235 Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGID 280 + +GD ++ + ++ G +K + +N +LG D Sbjct: 236 VGMRKGDKTLRQKIN---AGLGKLQKNGELRKINQKWFGTNSN-----YLGAD 280 >gi|134294561|ref|YP_001118296.1| extracellular solute-binding protein [Burkholderia vietnamiensis G4] gi|134137718|gb|ABO53461.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia vietnamiensis G4] Length = 266 Score = 138 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 93/257 (36%), Gaps = 14/257 (5%) Query: 17 FTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 FT+ + +A +L +KK G L+ G+ F +G +GFDVD A++ + Sbjct: 19 FTAVAAHADDLLDSVKKAGVLRVGLEGTYPPFNSRGTSGQLEGFDVDVANAVAGKLG--- 75 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK- 134 K Q++P LQ+ + D++ T R+ +L + P TY Q Sbjct: 76 VKTQFVPTEWSGIIAGLQAGKFDVIVNQVTITPQRKEALDFSE-PYTYSAAQLIQRKDDT 134 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 + S+ G + V GT D + E A R +A Sbjct: 135 RNFKSLEDFKGKKLGVTLGTNY-----DQMARSVPGIEVQTYPGAPEKLRDLAAGRIEAT 189 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D L + T++ P + + + +A +G+ ++ ++ ++ L Sbjct: 190 LDDRLMLPYMIKTSNLPLRSGAVLNGGKQE-MAIPFRKGNPKFEKAINDALDSLRKEGTL 248 Query: 255 GITQKNINQVSKDTTNP 271 ++ D T P Sbjct: 249 KKIS--MHWFGSDVTVP 263 >gi|16804289|ref|NP_465774.1| hypothetical protein lmo2250 [Listeria monocytogenes EGD-e] gi|224500950|ref|ZP_03669257.1| hypothetical protein LmonFR_00275 [Listeria monocytogenes FSL R2-561] gi|16411720|emb|CAD00328.1| arpJ [Listeria monocytogenes EGD-e] Length = 486 Score = 138 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 53/278 (19%), Positives = 105/278 (37%), Gaps = 24/278 (8%) Query: 1 MYKDF---FVSILCLIILFFTSFS------TNASILGDIKKRGFLKCGINTGLVGFAE-- 49 M K F +IL + I+ F+ F+ T L I+++G L G++ + Sbjct: 1 MQKHLLQKFAAILLVFIVVFSGFTSVFAADTEDQTLAKIQEKGVLTVGLSADYPPYEFHQ 60 Query: 50 -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + GFDV ++ + K+ +N +L++ +ID++ T Sbjct: 61 TIDGKDKVVGFDVSIAEKIAKDL---DVKLDIKEMNFDSLLGSLKTGKIDMIISGMSPTP 117 Query: 109 LREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 R+ + F Q ++ K K +SV+ SG + Q TT E + + Sbjct: 118 ERQKEVDF--SDPYMFVQQRVVIRKTDKDKFTSVNDFSGVKVGAQKQTTQE----ELAQN 171 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + ++V ++ ++++ DA + A + + I SK Sbjct: 172 ELVGSEVVSLQKVPDLILNLKSNKVDAVVLEGPVAEAYISQDKTLAMADIKFSNGSKET- 230 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 A A+ +G T V+ + + L QK N++ Sbjct: 231 AIAMPKGSTALQEKVNASIKDIQDTGLLKEYQKEANKL 268 >gi|258647025|ref|ZP_05734494.1| amino acid ABC transporter, amino acid-binding protein [Dialister invisus DSM 15470] gi|260404466|gb|EEW98013.1| amino acid ABC transporter, amino acid-binding protein [Dialister invisus DSM 15470] Length = 269 Score = 138 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 41/228 (17%), Positives = 85/228 (37%), Gaps = 8/228 (3%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 + G++ G+ GFD+D +A+S I I++ P++ + L+S Sbjct: 42 KIVAGMDDTFAPMGFRDDKGEIVGFDIDMAKAVSKEIGIP---IEFKPIDWASKETELES 98 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 +ID + T R+ + LAF + Q +++ + +L G + +Q + Sbjct: 99 GRIDCIWNGFTMTPERQKA--LAFTKPYMDNVQVYVVLADSAVQKAEELKGKKLSIQESS 156 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T + L + + + R DA D + +P++ Sbjct: 157 TAQTLLDRDENLKKSFGEIKAYPDLTACFMDLESGRADAVLADTCLIEYYMT--KKPNKF 214 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE-LGITQKNI 261 LP +SK + I + + +I++ ++ E I+QK Sbjct: 215 RELPGEVSKDTFSIGIKKDNKVLVDILNDGIDKVIKNGEASKISQKWF 262 >gi|3603430|gb|AAC35851.1| amino acid-binding protein Abp [Streptococcus uberis] Length = 277 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 38/282 (13%), Positives = 87/282 (30%), Gaps = 14/282 (4%) Query: 1 MYKDFFVSILCLIILFFTSF----STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 + K ++ LF + + KK + G + V +G Sbjct: 3 LKKILLTTLALASTLFLVACGKSSAAKTDQWDTYKKEKSITLGFDNTFVPMGFKDESGKN 62 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFDV+ +A+ K+++ P+N + L++ +ID++ T R+ + Sbjct: 63 TGFDVELAKAVFQEYG---IKVKFQPINWDLKETELKNGKIDMIWNGYSVTKERQAKVAF 119 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI-- 174 + Q + K I+S + + G + Q+G++ K Sbjct: 120 --STPYMKNEQVLVTKKSSNITSFAAMKGKVLGAQSGSSGYDAFTSNPKVLKDIVKDNDA 177 Query: 175 -VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 +E + + R D D + + I+ A + + Sbjct: 178 TQYETFIQAFIDLKNDRIDGLLIDKVYANYYLKQEGELTNYNIVKSEFDGEDFAVGVRKE 237 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 D ++ + + + +D +V++ Sbjct: 238 DKILLKNINSAFTKLYKTGKFQEISQ--KWFGEDVATENVKK 277 >gi|225028750|ref|ZP_03717942.1| hypothetical protein EUBHAL_03029 [Eubacterium hallii DSM 3353] gi|224953941|gb|EEG35150.1| hypothetical protein EUBHAL_03029 [Eubacterium hallii DSM 3353] Length = 266 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 60/280 (21%), Positives = 103/280 (36%), Gaps = 30/280 (10%) Query: 1 MYKDFFVSILCLIILFFTSF------------STNASILGDIK--KRGFLKCGINTGLVG 46 M K V++ ++ + + ST+A+ +K K G L N Sbjct: 3 MKKLAAVALAVVMSVSMLAGCGSSNDKKSAESSTSANGTATVKTAKDGVLTMATNATFPP 62 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 + + N D G D D +A++ + K++ + A+QS + D+ Sbjct: 63 YESYEGN-DIVGIDADIAKAIADKLG---LKLEIQDMEFNSIITAVQSGKADLGLAGMTV 118 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T R+ S+ T Q I+ + I S+ L G I VQ TT ++ D F Sbjct: 119 TDERKQSVDFTDSYAT--GIQSVIVKEGSSIKSIDDLKGKKIGVQLATTGDIYAKDDFGE 176 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 N + + + A + + DA D + T D IL + Sbjct: 177 EN----VEEYNKGADAVMALTSGKIDAVIIDNQPAKSFVETTDG---LQILDTDYVQEDY 229 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 A AI +G+T+ N V+ +E G QK +++ K Sbjct: 230 AAAIQKGNTDLLNAVNGALK---ELKEDGTIQKILDKYIK 266 >gi|121593167|ref|YP_985063.1| extracellular solute-binding protein [Acidovorax sp. JS42] gi|120605247|gb|ABM40987.1| amino acid ABC transporter substrate-binding protein, PAAT family [Acidovorax sp. JS42] Length = 295 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 37/271 (13%), Positives = 84/271 (30%), Gaps = 15/271 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG-----FLKCGINTGLVGFAEVKANGD 55 M K V++L L + + + G++ + Sbjct: 30 MKKFAAVALLTLGAVLVGCSKQEPAAPAAAPAPAPAAVTKIVVGLDDNFPPMGFRDEKNE 89 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFD+D + + + + +++ P++ + L K++D L T R+ ++ Sbjct: 90 LVGFDIDMAKEAAKRLGVE---VEFKPIDWSAKEAELSGKRVDALWNGLTITEERKQNIL 146 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + Q ++ I + + L+G + Q G++ + Sbjct: 147 F--TAPYMENHQIIVVPAGSAIKAKADLAGKVVGAQEGSSAVDAIKKEEAVFKSFKELKT 204 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F R +A D + +P ++ +L D + + DT Sbjct: 205 FGDNVTALMDLTTGRLEAVVVD--EVVGRYYVAKKPDQYAVLDDNFGTEEYGVGVRKDDT 262 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 E + + A+ ++ G K Q Sbjct: 263 ELHGKLD---KALADMKQDGSAAKIAEQWFG 290 >gi|330806945|ref|YP_004351407.1| Putative ABC transporter, periplasmic component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375053|gb|AEA66403.1| Putative ABC transporter, periplasmic component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 266 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 49/244 (20%), Positives = 86/244 (35%), Gaps = 14/244 (5%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + L IK G +K G+ F+ V +G GF+V+F AL+ + K++ Sbjct: 27 AVAGEQLQKIKDAGEIKIGLEGTYPPFSFVDDSGKLTGFEVEFSEALAKELG---VKVKL 83 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK---GI 137 AL+SK++D + + R+ + P T Q ++ KK I Sbjct: 84 QTTPWAGILAALESKRLDAVVNQVTISEERKKKYDFSE-PYTVSGIQALVLTKKADELNI 142 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + L G + V GT E + KA ++ R R D D Sbjct: 143 KKAADLDGKKVGVGLGTNYEQ----WVKAEVPGAQVKTYDDDPTKFQDLRVGRIDTILID 198 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 L AL+ + + + + S+ A+ +G+ E V+ + L Sbjct: 199 R--LAALEY-AKKAKDTTVTSEAFSRQESGIALRKGEPELLAAVNKAIEKLRADGTLKKL 255 Query: 258 QKNI 261 + Sbjct: 256 SEKY 259 >gi|256785609|ref|ZP_05524040.1| bifunctional protein [Streptomyces lividans TK24] gi|289769505|ref|ZP_06528883.1| conserved hypothetical protein [Streptomyces lividans TK24] gi|289699704|gb|EFD67133.1| conserved hypothetical protein [Streptomyces lividans TK24] Length = 691 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 44/250 (17%), Positives = 86/250 (34%), Gaps = 15/250 (6%) Query: 32 KRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 R L G G + + G W GFDVD AL+ + +++ + + R Sbjct: 438 ARKRLTIGAKEDQPGLSFYNKDTGVWSGFDVDIAYALAGKLGYGKAQVDFYGVTTANRAS 497 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS--- 147 L++ ++D++ + T RE G++F Y G ++ K + + Sbjct: 498 KLKNGEVDLVVASYSMTPEREKRDGISFVGPYYKAGSSLLVRKNSAKYDLGEAVDVKRNR 557 Query: 148 --ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD--AYTGDISALYA 203 +C +T AD + + +E R A D L Sbjct: 558 VEVCTARDSTY----ADRLEEDGYTTGKWQPDTYKECVERLLDKRSSVYAVASDDVLLAG 613 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQKNIN 262 + P+ +LP P A+ + D + V ++ +E + K+++ Sbjct: 614 YA--QNDPAHLKLLPSGAGTEPYGVAMRKDDPLLKSKVCSGLQEILAGKEWAEMYMKDLS 671 Query: 263 QVSKDTTNPD 272 ++ T P Sbjct: 672 PLTGRKTAPS 681 >gi|159186274|ref|NP_355978.2| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|159141408|gb|AAK88763.2| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 267 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 49/229 (21%), Positives = 86/229 (37%), Gaps = 10/229 (4%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L +I RG +K G+ TG V G+ G+DVD + S + ++ +PL Sbjct: 31 SLSEITARGKVKIGVLTGAPPMGMVDEKGNPSGYDVDVANLIGSYLSLP---VELVPLTP 87 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 R ALQ+ ++D L T R ++ + I K + ++ L G Sbjct: 88 PARIPALQTGKVDFLVATLAPTGERAKTVMFTQPYSAF--NMDIISGKDQKFENLDSLKG 145 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 + V G++ E L KA+ +V+E A A + DA + Sbjct: 146 KRVSVNRGSSQETALR---KANVEGLEIVVYEDDSTSAQALLAGQVDAVALPSTV--GEA 200 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 + RP + + + + A D E ++ + Y M + +L Sbjct: 201 IIKQRPEAGLQVGFTFFQQGNSMATKIEDFELRQWLNTSIYLMKMSGDL 249 >gi|28869816|ref|NP_792435.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato str. DC3000] gi|28853061|gb|AAO56130.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 280 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 48/260 (18%), Positives = 94/260 (36%), Gaps = 12/260 (4%) Query: 5 FFVSIL-CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVD 62 F ++L L + + F + L +++R L G+ F + +G +V+ Sbjct: 11 FLPAMLGVLASIAVSGFVLADATLDKVQERHRLVVGVLLSGGPFGSIDPQTRKPQGVNVE 70 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + + + ++ + + R LQ ++D+L N +WT R LG + Sbjct: 71 LAEDIGKRLGVE---VELVSVLTANRVQFLQQGKVDLLIANMEWTPERGQLLG-SVPTPF 126 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y G + K I+ L G +C G++ L ++ F+ E Sbjct: 127 YRVGGTAAVLKDSAITRWEDLKGQPVCTSQGSSYIKALTEF------GADIKAFKSSSES 180 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A R + C A D + + L ND + + ++ +P G+T+ N + Sbjct: 181 LLALRGNNCVAAVHDATLINPLLAGNDEWKGYRAIAPELNPAPSVIWTRSGETDTQNRLD 240 Query: 243 WTHYAMVTAEELGITQKNIN 262 + L +K N Sbjct: 241 SIVQDWHRSGWLIELEKRYN 260 >gi|254253412|ref|ZP_04946730.1| ABC-type amino acid transport/signal transduction systems periplasmic component [Burkholderia dolosa AUO158] gi|124896021|gb|EAY69901.1| ABC-type amino acid transport/signal transduction systems periplasmic component [Burkholderia dolosa AUO158] Length = 266 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 51/257 (19%), Positives = 93/257 (36%), Gaps = 14/257 (5%) Query: 17 FTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 FT+ + +A +L +KK G L+ G+ F +G +GFDVD A++ + Sbjct: 19 FTAVAAHAEDLLDSVKKAGVLRVGLEGTYPPFNSRGTSGQLEGFDVDVANAVAGKLG--- 75 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 K Q++P LQ+ + D++ T R+ +L + P TY Q K Sbjct: 76 VKTQFIPTEWSGIIAGLQAGKFDVIVNQVTITPQRKEALDFSE-PYTYSAAQLIQRKDDK 134 Query: 136 -GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 S+ G + V GT D + E A R +A Sbjct: 135 RDFKSLEDFKGKKLGVTLGTNY-----DQMARSVPGIEVQTYPGAPEKLRDLAAGRIEAT 189 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D L + T++ P + + + +A +G+ ++ ++ ++ L Sbjct: 190 LDDRLMLPYMIKTSNLPLRAGAVLNGGKQE-MAIPFRKGNPKFEKAINDALESLRKDGTL 248 Query: 255 GITQKNINQVSKDTTNP 271 ++ D T P Sbjct: 249 KKIS--MHWFGSDVTVP 263 >gi|254519793|ref|ZP_05131849.1| extracellular solute-binding protein [Clostridium sp. 7_2_43FAA] gi|226913542|gb|EEH98743.1| extracellular solute-binding protein [Clostridium sp. 7_2_43FAA] Length = 266 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 47/268 (17%), Positives = 89/268 (33%), Gaps = 12/268 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K S+L L+ L S + + ++ L G + V NG++ GFD+ Sbjct: 5 KKILITSLLGLMSLALVSCGEK--KIENSMEKEELVLGFDDTFVPMGFKDKNGEYTGFDI 62 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + + + + KI + P++ + L + ID + T R+ + Sbjct: 63 ELAKGIGEKL---NKKIIFQPIDWSMKETELNNGNIDFIWNGYSVTKERKEKVAF--SKE 117 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN--MKYHPIVFERV 179 + Q I I+S +L A + Q ++ + N + FE Sbjct: 118 YLNNRQVIITLANSKINSKKELKDAVVAAQNQSSAVDAIEADGDIVNSFKDGKIVTFETN 177 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A R DA D L + ++ +L + K A + + D + Sbjct: 178 NEALMDLEAGRVDAVVADE-ILAKYYINQRGAEKYKVLDEDFGKESYAVGMRKDDKDLVE 236 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKD 267 + +V + G K +D Sbjct: 237 AFNNAFDELVNEGKAGEISK--KWFGED 262 >gi|328957172|ref|YP_004374558.1| extracellular solute-binding protein [Carnobacterium sp. 17-4] gi|328673496|gb|AEB29542.1| extracellular solute-binding protein [Carnobacterium sp. 17-4] Length = 262 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 47/235 (20%), Positives = 92/235 (39%), Gaps = 14/235 (5%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L G++ V + G+ G DVD ++ + I++ P++ + L S Sbjct: 36 TLVVGLDDTFVPMGFRDSEGNLVGLDVDLATEVAKRL---DLNIEFQPIDWAMKETELTS 92 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFD-GQGFIMHKKKGISSVSQLSGASICVQAG 153 ID++ T R+ + + I Y D GQ F++ I + L ++ Q Sbjct: 93 GNIDVIWNGYSITEERKEKVDFS---IPYTDGGQIFVVLADSPIKTWDDLKEKTVAAQQS 149 Query: 154 TTTELTLADYFKAHNMKY---HPIVFERVEEIDAAYRAHRCDAYTGDISALYA-LKLTND 209 ++T LA + + I + ++ + R +A +S +YA + Sbjct: 150 SSTVDLLASHESGIMDTFANGEIIQYPSYNDVFNDLDSKRSEAIA--VSEIYARYTMKQK 207 Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQKNINQ 263 ++ IL + ++ A + + DTE+ ++ T M LG I K I + Sbjct: 208 GLGKYRILDESFAEEETAVGVRKTDTEFLEKLNTTLTDMEKDGTLGEIKNKWIKE 262 >gi|288916725|ref|ZP_06411099.1| extracellular solute-binding protein family 3 [Frankia sp. EUN1f] gi|288351799|gb|EFC86002.1| extracellular solute-binding protein family 3 [Frankia sp. EUN1f] Length = 375 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 51/260 (19%), Positives = 96/260 (36%), Gaps = 23/260 (8%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPS--KIQY 80 SI+ DI ++G L I T + +GFDVD A+++A+F + KI++ Sbjct: 92 GSIMDDIWRKGDLTVAIVTDAPPAGSMNWTEPTLEGFDVDIAGAIATALFGNGGESKIRF 151 Query: 81 LPLNAKERFLALQSKQ--IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + K+R L++ +DI+ T R+ + F + + ++ K G Sbjct: 152 RAVTTKDRAALLKNPNSGVDIVVATYTITCERKEKENILFSGVYFESRFALLVPAKAGFK 211 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAH----NMKYHPIVFERVEEIDAAYRAHRCDAY 194 ++ +G +IC G T+ L D ++ + + R + A + D Sbjct: 212 TLRDFAGYTICSTEGATSVQKLEDAARSALAPGDPPLTITLRPRAADCLVAVQQGEADGV 271 Query: 195 TGDISALYALKLTN---DRPSEHVILPDIISKSPLAPAIIQ-----------GDTEWYNI 240 D L +K + D P V P A+ + D E+ Sbjct: 272 ATDDIILAGMKARDQYVDVPPGGVTAAGDDLAEPYGVALHRSHLDDPNANKLRDEEFVQF 331 Query: 241 VSWTHYAMVTAEELGITQKN 260 V+ M+ + + +N Sbjct: 332 VNGVLRDMMASGGWATSYQN 351 >gi|303228616|ref|ZP_07315442.1| bacterial extracellular solute-binding protein, family 3 [Veillonella atypica ACS-134-V-Col7a] gi|302516708|gb|EFL58624.1| bacterial extracellular solute-binding protein, family 3 [Veillonella atypica ACS-134-V-Col7a] Length = 270 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 45/271 (16%), Positives = 92/271 (33%), Gaps = 13/271 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K V + + ++ F S + + D + + G++ G+ G D+ Sbjct: 4 KKIMAVGLAAVSMMAFVSGCGSDTKKADTQLPKKIVIGLDDSFPPMGFKDDKGEIVGLDI 63 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D + + D +++ ++ + L+SK+ID+L + RE ++ Sbjct: 64 DLAKEAAKRAGMD---VEFKAIDWSSKEAELKSKKIDVLWNGLTVSPEREKNILF--SDT 118 Query: 122 TYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 D Q ++ I S L+G + VQ +T E L + +K + Sbjct: 119 YMKDKQYIVVRNDDNAIKGKSDLAGKVVGVQQASTGESALQNDPSGKTVK-EIKSYADFV 177 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL-PDIISKSPLAPAIIQGDTEWYN 239 R DA D A L P ++ I+ A + DT + Sbjct: 178 SAFMDLGIGRVDAVIADGVI--ARYLMTKEPGKYKIVEGTDYGVDNFAVGFRKDDTALRD 235 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 ++ M ++ G K + + + + Sbjct: 236 KINSILAEM---KKDGTADKIVEKWLGSSAD 263 >gi|224367658|ref|YP_002601821.1| AapJ1 [Desulfobacterium autotrophicum HRM2] gi|223690374|gb|ACN13657.1| AapJ1 [Desulfobacterium autotrophicum HRM2] Length = 119 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 52/119 (43%), Positives = 74/119 (62%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M FV +L + LF T+ A L D+K +GF++ G+N L GF + G W+G D Sbjct: 1 MKSVKFVGVLLMAALFLTAGMATADTLEDVKAKGFIQAGVNGDLFGFGKPDEKGVWRGLD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 VD RA+++A+F D +K+++ PL AK RF ALQS +ID+L+RN TL R+ LGL F Sbjct: 61 VDTARAVAAAVFGDANKVKFTPLTAKTRFTALQSGEIDVLTRNCTQTLTRDTDLGLDFA 119 >gi|161523531|ref|YP_001578543.1| extracellular solute-binding protein [Burkholderia multivorans ATCC 17616] gi|189351696|ref|YP_001947324.1| polar amino acid transporter substrate-binding protein [Burkholderia multivorans ATCC 17616] gi|221201670|ref|ZP_03574708.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia multivorans CGD2M] gi|221207255|ref|ZP_03580265.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia multivorans CGD2] gi|221213394|ref|ZP_03586369.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia multivorans CGD1] gi|160340960|gb|ABX14046.1| extracellular solute-binding protein family 3 [Burkholderia multivorans ATCC 17616] gi|189335718|dbj|BAG44788.1| polar amino acid transport system substrate-binding protein [Burkholderia multivorans ATCC 17616] gi|221166846|gb|EED99317.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia multivorans CGD1] gi|221172843|gb|EEE05280.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia multivorans CGD2] gi|221178486|gb|EEE10895.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia multivorans CGD2M] Length = 266 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 51/257 (19%), Positives = 93/257 (36%), Gaps = 14/257 (5%) Query: 17 FTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 FT+ + +A +L +KK G L+ G+ F +G +GFDVD A++ + Sbjct: 19 FTAVAAHAEDLLDSVKKAGVLRVGLEGTYPPFNSRGTSGQLEGFDVDVANAVAGKLG--- 75 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 K Q++P LQ+ + D++ T R+ +L + P TY Q K Sbjct: 76 VKTQFIPTEWSGIIAGLQAGKFDVIVNQVTITPQRKEALDFSE-PYTYSAAQLIQRKDDK 134 Query: 136 -GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 S+ G + V GT D + E A R +A Sbjct: 135 RDFKSLEDFKGKKLGVTLGTNY-----DQMARSVPGIEVQTYPGAPEKLRDLAAGRIEAT 189 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D L + T++ P + + + +A +G+ ++ ++ ++ L Sbjct: 190 LDDRLMLPYMIKTSNLPLRAGAVLNGGKQE-MAIPFRKGNPKFEKAINDALESLRKDGTL 248 Query: 255 GITQKNINQVSKDTTNP 271 ++ D T P Sbjct: 249 KKIS--MHWFGSDVTVP 263 >gi|255030491|ref|ZP_05302442.1| hypothetical protein LmonL_17866 [Listeria monocytogenes LO28] Length = 278 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 53/278 (19%), Positives = 105/278 (37%), Gaps = 24/278 (8%) Query: 1 MYKDF---FVSILCLIILFFTSFS------TNASILGDIKKRGFLKCGINTGLVGFAE-- 49 M K F +IL + I+ F+ F+ T L I+++G L G++ + Sbjct: 1 MQKHLLQKFAAILLVFIVVFSGFTSVFAADTEDQTLAKIQEKGVLTVGLSADYPPYEFHQ 60 Query: 50 -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + GFDV ++ + K+ +N +L++ +ID++ T Sbjct: 61 TIDGKDKVVGFDVSIAEKIAKDL---DVKLDIKEMNFDSLLGSLKTGKIDMIISGMSPTP 117 Query: 109 LREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 R+ + F Q ++ K K +SV+ SG + Q TT E + + Sbjct: 118 ERQKEVDF--SDPYMFVQQRVVIRKTDKDKFTSVNDFSGVKVGAQKQTTQE----ELAQN 171 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + ++V ++ ++++ DA + A + + I SK Sbjct: 172 ELVGSEVVSLQKVPDLILNLKSNKVDAVVLEGPVAEAYISQDKTLAMADIKFSNGSKET- 230 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 A A+ +G T V+ + + L QK N++ Sbjct: 231 AIAMPKGSTALQEKVNASIKDIQDTGLLKEYQKEANKL 268 >gi|315304435|ref|ZP_07874723.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria ivanovii FSL F6-596] gi|313627196|gb|EFR96041.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria ivanovii FSL F6-596] Length = 486 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 52/278 (18%), Positives = 109/278 (39%), Gaps = 24/278 (8%) Query: 1 MYKDFF---VSILCLIILFFTSFST------NASILGDIKKRGFLKCGINTGLVGFAE-- 49 M K+F +I + I F+SF+T L I+++G L G++ + Sbjct: 1 MQKNFLQKLAAIALIFIFVFSSFNTVFAADKQDETLTKIQEKGVLTVGLSADYPPYEFHQ 60 Query: 50 -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + + GFDV + ++ + K+ +N +L++ +ID++ T Sbjct: 61 TIDGKDEIVGFDVSIAKKIAKDL---DVKLDIKEMNFDSLLGSLKTGKIDMIISGMSPTP 117 Query: 109 LREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 R+ + F Q ++ K K+ +SV+ +G + Q TT E + + Sbjct: 118 ERQKEVDF--SDPYMFVQQRVVVRKADKEKFTSVNDFNGVKVGAQKQTTQE----ELAQN 171 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + ++V ++ ++++ DA + A + + I SK Sbjct: 172 ELIGSDVVSLQKVPDLILNLKSNKVDAVVLEGPVAEAYLSQDKTLAMADIKFVNGSKET- 230 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 A A+ +G T + V+ + + L QK N++ Sbjct: 231 AIAMPKGSTALQDKVNASIKEIQDTGLLKDYQKEANKL 268 >gi|300763939|ref|ZP_07073935.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter [Listeria monocytogenes FSL N1-017] gi|300515280|gb|EFK42331.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter [Listeria monocytogenes FSL N1-017] Length = 486 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 52/278 (18%), Positives = 105/278 (37%), Gaps = 24/278 (8%) Query: 1 MYKDFF---VSILCLIILFFTSFST------NASILGDIKKRGFLKCGINTGLVGFAE-- 49 M K +IL + I+ F+ F+T L I+++G L G++ + Sbjct: 1 MQKHLLQKIAAILLVFIVVFSGFTTVFAADTEDQTLAKIQEKGVLTVGLSADYPPYEFHQ 60 Query: 50 -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + GFDV ++ + K++ +N +L++ +ID++ T Sbjct: 61 TIDGKDKVVGFDVSIAEKIAKDL---DVKLEIKEMNFDSLLGSLKTGKIDMIISGMSPTP 117 Query: 109 LREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 R+ + F Q ++ K K +SV+ SG + Q TT E + + Sbjct: 118 ERQKEVDF--SDPYMFVQQRVVIRKTDKDKFTSVNDFSGVKVGAQKQTTQE----ELAQN 171 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + ++V ++ ++++ DA + A + + I SK Sbjct: 172 ELVGSEVVSLQKVPDLILNLKSNKVDAVVLEGPVAEAYISQDKTLAMADIKFANGSKET- 230 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 A A+ +G T V+ + + L QK N++ Sbjct: 231 AIAMPKGSTALQEKVNVSIKDIQDTGLLKKYQKEANKL 268 >gi|21223285|ref|NP_629064.1| bifunctional protein [Streptomyces coelicolor A3(2)] gi|20520711|emb|CAD30902.1| putative bifunctional protein [Streptomyces coelicolor A3(2)] Length = 670 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 44/250 (17%), Positives = 86/250 (34%), Gaps = 15/250 (6%) Query: 32 KRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 R L G G + + G W GFDVD AL+ + +++ + + R Sbjct: 417 ARKRLTIGAKEDQPGLSFYNKDTGVWSGFDVDIAYALAGKLGYGKAQVDFYGVTTANRAS 476 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS--- 147 L++ ++D++ + T RE G++F Y G ++ K + + Sbjct: 477 KLKNGEVDLVVASYSMTPEREKRDGISFVGPYYKAGSSLLVRKNSAKYDLGEAVDVKRNR 536 Query: 148 --ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD--AYTGDISALYA 203 +C +T AD + + +E R A D L Sbjct: 537 VEVCTARDSTY----ADRLEEDGYTTGKWQPDTYKECVERLLDKRSSVYAVASDDVLLAG 592 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQKNIN 262 + P+ +LP P A+ + D + V ++ +E + K+++ Sbjct: 593 YA--QNDPAHLKLLPSGAGTEPYGVAMRKDDPLLKSKVCSGLREILAGKEWAEMYMKDLS 650 Query: 263 QVSKDTTNPD 272 ++ T P Sbjct: 651 PLTGRKTAPS 660 >gi|119387390|ref|YP_918424.1| extracellular solute-binding protein [Paracoccus denitrificans PD1222] gi|119377965|gb|ABL72728.1| amino acid ABC transporter substrate-binding protein, PAAT family [Paracoccus denitrificans PD1222] Length = 269 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 47/267 (17%), Positives = 106/267 (39%), Gaps = 8/267 (2%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K + L L I+ A + IK+RG + I+ + + + G DV Sbjct: 5 RKAATAAGLVLGIVTGLVGPAAADVPAAIKERGKVLIAIDVSHPPYGMLDSQARETGSDV 64 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + + L+ + ++ +P++ R +L S+++D++ + T R+ + + Sbjct: 65 ETAKLLAEDMG---VALEIVPVSGANRVPSLLSRKVDMVIASFSITEERKKVIDYSR--P 119 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + GI++ + L+G ++ V GTT ++ L+ K + + +E Sbjct: 120 YGVIPVVISAPQDMGIAAPADLAGQALAVARGTTADIELSRIVKESGVNARIVRYEDEAT 179 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + A + +S A +++ P ++ + ++ P+A + +GD E V Sbjct: 180 TNTAVATGQQKILAAALST--ANEVSEQNPGLNLEVKLDMAAYPMAVGLRKGDDELKAWV 237 Query: 242 S-WTHYAMVTAEELGITQKNINQVSKD 267 W + + I +K +Q D Sbjct: 238 DEWVGQNLENGKLNAIYEKYFHQPLPD 264 >gi|186685028|ref|YP_001868224.1| extracellular solute-binding protein [Nostoc punctiforme PCC 73102] gi|186467480|gb|ACC83281.1| extracellular solute-binding protein, family 3 [Nostoc punctiforme PCC 73102] Length = 271 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 45/256 (17%), Positives = 100/256 (39%), Gaps = 14/256 (5%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F++S ++ FT+ + + +I++RG+L + L ANG+ +G ++D Sbjct: 23 FWISCFSIVGTGFTASAAE---MPEIQQRGYLTVAVKDNLRPLGFRDANGNLQGLEIDLA 79 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 + L+ + ++ P+ ++R + K++D T R + Y Sbjct: 80 QRLALDLVGKTDAVKLQPVANRDRLSVVLDKKVDFAIARVTATESRSRIVSF--SVPYYL 137 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 DG ++ K ++ +S L+ I V ++T + Y + E Sbjct: 138 DGT-VLVTKDASVNKLSDLAKQKIAVLNNSSTIAKVRFYLPNA----ELVGVNSYHEARE 192 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 ++ A+ D + L ++ +LP +S PL+ + +G ++ + Sbjct: 193 KIESNAAVAFAADATVLSGWVQQYP---QYQLLPTKLSTEPLSVVMPKG-LQYDKLRRNV 248 Query: 245 HYAMVTAEELGITQKN 260 + A+ E G Q+ Sbjct: 249 NQAIARYLEQGWLQQR 264 >gi|209515706|ref|ZP_03264570.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] gi|209503942|gb|EEA03934.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] Length = 264 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 54/263 (20%), Positives = 97/263 (36%), Gaps = 19/263 (7%) Query: 13 IILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI 71 I FT+ + +A +L +K+RG L+ G+ F +G+ G+DVD +A+++ + Sbjct: 15 IGASFTAVAAHAADLLDQVKQRGTLRVGLEGTFPPFNSKAPSGELVGYDVDIAKAVAAKL 74 Query: 72 FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131 P +++ LQ+ + D++ T R+ +L P + I Sbjct: 75 GVKP---EFVTTEWSGIIAGLQAGKFDVIVNQVGITDARKQTLDF--SPAYTYSAAQLIQ 129 Query: 132 HKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 K +S+ L G + V GT D KA + E A Sbjct: 130 RKDDTRQFTSLEDLKGKKLGVGLGT----NYMDMAKA-VPGIDVKTYPGAPEYLRDLAAG 184 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 R DA D L L ++ P ++ +P +G+ ++ + AM Sbjct: 185 RLDAALNDRLMLAYLLKNSNLP--LRTGANVGPGNPSGIPFKKGNPQFAKAIDD---AMT 239 Query: 250 TAEELGITQKNINQVSK-DTTNP 271 E G K ++ D + P Sbjct: 240 QLEADGTFTKISDKWFGIDVSKP 262 >gi|107022626|ref|YP_620953.1| extracellular solute-binding protein [Burkholderia cenocepacia AU 1054] gi|116689575|ref|YP_835198.1| extracellular solute-binding protein [Burkholderia cenocepacia HI2424] gi|170732879|ref|YP_001764826.1| extracellular solute-binding protein [Burkholderia cenocepacia MC0-3] gi|206559974|ref|YP_002230738.1| periplasmic cystine-binding protein [Burkholderia cenocepacia J2315] gi|254245535|ref|ZP_04938856.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia cenocepacia PC184] gi|105892815|gb|ABF75980.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia AU 1054] gi|116647664|gb|ABK08305.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia HI2424] gi|124870311|gb|EAY62027.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia cenocepacia PC184] gi|169816121|gb|ACA90704.1| extracellular solute-binding protein family 3 [Burkholderia cenocepacia MC0-3] gi|198036015|emb|CAR51908.1| periplasmic cystine-binding protein [Burkholderia cenocepacia J2315] Length = 264 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 56/277 (20%), Positives = 102/277 (36%), Gaps = 21/277 (7%) Query: 1 MYKDFFVSILCLIILFFT---SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M +L ++ + + + A +L +K+RG L+ G+ F G+ Sbjct: 1 MKFSLLKKLLVAGVIGTSFAAATAHAADLLDQVKQRGTLRVGLEGTFPPFNSKSPQGELV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD +A+++ + K +++ LQ+ + D+++ T R+ +L Sbjct: 61 GFDVDIAKAVAAKLG---VKAEFVTTEWSGIIAGLQAGKFDVIANQVGITDKRKETLDF- 116 Query: 118 FRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 P + I K S+ L G + V G T + +A ++K +P Sbjct: 117 -SPAYTYSSAQLIQRKDDTRQFKSLEDLKGKKLGVALG-TNYMDMAKSVPGIDVKTYPGA 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 E A R DA D L L + P ++ S +P +G+ Sbjct: 175 ----PEYLRDLAAGRLDAALNDRLMLAYLTKNSQLP--LRPGANVGSANPSGIPFKKGNP 228 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSK-DTTNP 271 ++ + AM E G K ++ D T P Sbjct: 229 KFQKAIDD---AMAQLEADGTFTKISDKWFGIDVTKP 262 >gi|330816747|ref|YP_004360452.1| Extracellular solute-binding protein, family 3 [Burkholderia gladioli BSR3] gi|327369140|gb|AEA60496.1| Extracellular solute-binding protein, family 3 [Burkholderia gladioli BSR3] Length = 264 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 57/272 (20%), Positives = 99/272 (36%), Gaps = 19/272 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K + L + F + S A +L + K+RG L+ G+ F +G+ G+DVD Sbjct: 7 KKLLTAAL-IGASFVAATSHAADLLDEAKQRGTLRIGLEGTFPPFNSKAPSGELVGYDVD 65 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 +A+++ + P +++ LQ+ + D++ T R L F P Sbjct: 66 IAKAVAAKLGLKP---EFVTTEWSGIIAGLQAGKFDVIVNQVGVTDKR--KEVLDFSPAY 120 Query: 123 YFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + I K S+ L G + V G T + +A ++K +P Sbjct: 121 TYSAAQLIQRKDDTRNFKSLDDLKGKKLGVGLG-TNYMDMAKSVPGIDVKTYPGA----P 175 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E A R DA D L L + P + + P A +G+ ++ Sbjct: 176 EYLRDLAAGRLDAALNDRLMLAYLLKNSQLP--LRTGATLEAGQPSAIPFKKGNPKFAKA 233 Query: 241 VSWTHYAMVTAEELGITQKNINQVSK-DTTNP 271 + AM E G K ++ D + P Sbjct: 234 IDD---AMTQLEADGTFTKISDKWFGIDVSKP 262 >gi|313607306|gb|EFR83728.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria monocytogenes FSL F2-208] Length = 486 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 52/278 (18%), Positives = 107/278 (38%), Gaps = 24/278 (8%) Query: 1 MYKDF---FVSILCLIILFFTSFST------NASILGDIKKRGFLKCGINTGLVGFAE-- 49 M K F +IL + I+ F+ F+T L I+++G L G++ + Sbjct: 1 MQKHLLQKFAAILLVFIVVFSGFTTVFAADTEDQTLAKIQEKGVLTVGLSADYPPYEFHQ 60 Query: 50 -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + GFDV + ++ + K++ +N +L++ +ID++ T Sbjct: 61 TIDGKDKVVGFDVSIAKKIAKDL---NVKLEIKEMNFDSLLGSLKTGKIDMIISGMSPTP 117 Query: 109 LREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 R+ + F Q ++ K K +SV+ SG + Q TT E + + Sbjct: 118 ERQKEVDF--SDPYMFVQQRVVIRKTDKDKFTSVNDFSGVKVGAQKQTTQE----ELAQN 171 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + ++V ++ ++++ +A + A + + I SK Sbjct: 172 ELVGSEVVSLQKVPDLILNLKSNKVEAVVLEGPVAEAYISQDKTLAMADIKFANGSKET- 230 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 A A+ +G T V+ + + L QK N++ Sbjct: 231 AIAMPKGSTALQEKVNASIKDIQDTGLLKKYQKEANKL 268 >gi|255026707|ref|ZP_05298693.1| hypothetical protein LmonocytFSL_10867 [Listeria monocytogenes FSL J2-003] Length = 486 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 53/278 (19%), Positives = 105/278 (37%), Gaps = 24/278 (8%) Query: 1 MYKDF---FVSILCLIILFFTSFS------TNASILGDIKKRGFLKCGINTGLVGFAE-- 49 M K F +IL + I+ F+ F+ T L I+++G L G++ + Sbjct: 1 MQKHLLQKFAAILLVFIVVFSGFTSVFAADTEDQTLAKIQEKGVLTVGLSADYPPYEFHQ 60 Query: 50 -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + GFDV ++ + K+ +N +L++ +ID++ T Sbjct: 61 TIDGKDKVVGFDVSIAEKIAKDL---DVKLDIKEMNFDSLLGSLKTGKIDMIISGMSPTP 117 Query: 109 LREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 R+ + F Q ++ K K +SV+ SG + Q TT E + + Sbjct: 118 ERQKEVDF--SDPYMFVQQRVVIRKTDKDKFTSVNDFSGVKVGAQKQTTQE----ELAQN 171 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + ++V ++ ++++ DA + A + + I SK Sbjct: 172 ELVGSEVVSLQKVPDLILNLKSNKVDAVVLEGPVAEAYISQDKTLAMADIKFANGSKET- 230 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 A A+ +G T V+ + + L QK N++ Sbjct: 231 AIAMPKGSTALQEKVNASIKDIQDTGLLKEYQKEANKL 268 >gi|310819142|ref|YP_003951500.1| glutamine ABC transporter substrate-binding protein [Stigmatella aurantiaca DW4/3-1] gi|309392214|gb|ADO69673.1| Glutamine ABC transporter substrate-binding protein [Stigmatella aurantiaca DW4/3-1] Length = 469 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 48/271 (17%), Positives = 95/271 (35%), Gaps = 25/271 (9%) Query: 13 IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72 ++L + A L I+ G L+ I+ + NG GFDVD R L+ + Sbjct: 1 MLLPVLAEPAPAGELERIRTAGVLRVAIDATYPPMEFL-ENGQPVGFDVDLSRELARRLG 59 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 Q++ ++ L S + DI+ + + T R + Q F+ Sbjct: 60 VTA---QFIVMDWDGILAGLTSGRYDIIVSSMNITPERLQQVDFIE---YARLSQVFVTT 113 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 + + I + +L+G + VQ TT++ + + F E +A +A + D Sbjct: 114 RGQSIRTEQELAGHRVAVQTNTTSQRWVERLQQRGVHVREIRPFPGATECFSAVKAGQAD 173 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 D +D V+ + P+ AI + + ++ + + Sbjct: 174 VIVIDEPVGLFFARRDDA---FVMTGKALDAEPIGIAIDKKAPDLTAALTRALQDIRDSG 230 Query: 253 ELGITQKNINQVSKDTTNPDVQRFLGIDKSS 283 E QK +++ R+ G + Sbjct: 231 E----QKRLSE-----------RWFGAELGQ 246 >gi|167033607|ref|YP_001668838.1| extracellular solute-binding protein [Pseudomonas putida GB-1] gi|166860095|gb|ABY98502.1| extracellular solute-binding protein family 3 [Pseudomonas putida GB-1] Length = 262 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 46/280 (16%), Positives = 96/280 (34%), Gaps = 28/280 (10%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + S +I F+ A L +++ L+ ++ F+ + GFD Sbjct: 7 RMLLASSAVAVIALFSQGVAQADDLQAVQESKILRVAMSGQYAPFSFANEKNEIVGFDAS 66 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 AL+ + KI+ + L +K+ D + + T R ++ Sbjct: 67 IGEALAQRLG---VKIKIITTPFDGIIAGLLAKKYDAVIASMTITPERLKAVDF--VGPY 121 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y G+ + + I + L ++ V G + D + ++ + E+ Sbjct: 122 YHAGRTIGVKEGSPIKGLDDLKDVTVGVTLGDS-----HDKWARARGNLKVRTYKGLPEM 176 Query: 183 DAAYRAHRCDAYTGDI-SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A R DA D + A+K T + + + + L AI + + E + Sbjct: 177 LVDLDAGRIDAVVMDSIPVMVAVKETGQKVRIINLPDEQGGREGLGIAIRRNNPELKAQL 236 Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDV-QRFLGID 280 QK ++++ D T ++ R++G D Sbjct: 237 ----------------QKALDEILADGTYKEISMRWVGSD 260 >gi|226327565|ref|ZP_03803083.1| hypothetical protein PROPEN_01436 [Proteus penneri ATCC 35198] gi|225204091|gb|EEG86445.1| hypothetical protein PROPEN_01436 [Proteus penneri ATCC 35198] Length = 231 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 47/218 (21%), Positives = 85/218 (38%), Gaps = 15/218 (6%) Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G+D D +++ + K++ P N R L SK++D+++ N T R + Sbjct: 7 KLAGYDADIANEIANDLG---VKLELRPTNPANRIPLLSSKKVDLIAANFTITDERAKQV 63 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + + GQ FI K +++ Q+ I GT E+TL + + I Sbjct: 64 DFSI--PYFATGQKFIARKG-VLTNPEQIHSLRIGADKGTVQEITLRERYP----DTKVI 116 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQ 232 ++ AA R A T D + L L ++ I P I++ A A + Sbjct: 117 SYDDTPLAFAALRNGNVQAITQDDAKLVGLLANLPDAIKADFEISPFSITREYQAVAAAK 176 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 G+ N ++ T + E+ G ++ N+ T Sbjct: 177 GEERLINEINNTL---LRLEKEGKAEEIYNRWFGPETK 211 >gi|238756657|ref|ZP_04617947.1| Cystine-binding periplasmic protein [Yersinia ruckeri ATCC 29473] gi|238705126|gb|EEP97553.1| Cystine-binding periplasmic protein [Yersinia ruckeri ATCC 29473] Length = 257 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 46/257 (17%), Positives = 80/257 (31%), Gaps = 13/257 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 + + L +L +K+RG L G+ F+ +G GF+VDF A Sbjct: 5 MMAVALATGLNVKSYAAGDLLDQVKQRGILIVGLEGTYPPFSFQGEDGKLTGFEVDFANA 64 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + K + P +L+SK+ID+ + R+ G Sbjct: 65 LAQHMG---VKAKLQPTKWDGMLASLESKRIDVAINQVTISADRKKKYDF--STPYTLSG 119 Query: 127 QGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 + K + L G + V G+ E + +A+ ++ Sbjct: 120 IQVLTKKGNEGQFTKPEDLQGKKVGVGLGSNYEQ----WLRANLKGVDIRTYDDDPTKYQ 175 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 R R DA D L AL L V ++ A+ + + E ++ Sbjct: 176 DLRIGRTDAILVDR--LAALDLVKKTGDTLVAAGPAFARQESGVALRKNNPELLAAINQA 233 Query: 245 HYAMVTAEELGITQKNI 261 M L Sbjct: 234 IAEMQKDGTLAKISDKY 250 >gi|210620907|ref|ZP_03292324.1| hypothetical protein CLOHIR_00267 [Clostridium hiranonis DSM 13275] gi|210155119|gb|EEA86125.1| hypothetical protein CLOHIR_00267 [Clostridium hiranonis DSM 13275] Length = 259 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 43/265 (16%), Positives = 96/265 (36%), Gaps = 13/265 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + K V +++L T+ S+ S D + G + V + +G+ GFD Sbjct: 5 LRKVMVVFAAMVMVLGMTACSSKDSGSAD----NKVIVGFDNTFVPMGFLDEDGNTVGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + + ++++ P++ + L S +D+L L +E +++ Sbjct: 61 VDLAKETFERLG---MEVEFQPIDWSMKETELNSGNVDVLWNGYS--LSQERKKIVSYSD 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA--DYFKAHNMKYHPIVFER 178 + Q + I+ + L+G + Q +T + + F + P++++ Sbjct: 116 PYLQNKQIIVTMADSNINKKADLAGKEVGTQQESTAQAAVETDTEFVSSLKGGAPVLYDT 175 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 ++ R A GD L ++ ++ +L + A + +TE Sbjct: 176 YDKALRDLEIGRTSAVAGDE-VLIRYYMSQKGEDKYKVLEENFGLEDYVVAFAKDNTELR 234 Query: 239 NIVSWTHYAMVTAEELG-ITQKNIN 262 + V+ T + I K Sbjct: 235 DKVNDTLKEIKDDGTFDEIYAKWFK 259 >gi|270262369|ref|ZP_06190641.1| hypothetical protein SOD_b05770 [Serratia odorifera 4Rx13] gi|270044245|gb|EFA17337.1| hypothetical protein SOD_b05770 [Serratia odorifera 4Rx13] Length = 263 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 47/236 (19%), Positives = 84/236 (35%), Gaps = 15/236 (6%) Query: 2 YKDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + + ++ + + S T A+ +L +K+RG L G+ F+ +G+ GF Sbjct: 7 RRQLLLGVMTVALTAGLSAQTYAADNLLQQVKQRGTLIVGLEGTYPPFSFQGEDGNLTGF 66 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 +VDF AL+ I K + P +L+SK+ID++ + R+ Sbjct: 67 EVDFANALAQHIG---VKAKLNPTKWDGMLASLESKRIDVVINQVTISDERKKKYDF--S 121 Query: 120 PITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 G ++ K I+ L G + V GT E L + + ++ Sbjct: 122 TPYTVSGIQALVKKGNEGTIAKPEDLKGKKVGVGLGTNYEQWLRE----NVQGVDVRTYD 177 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 R R +A D L AL L + S+ A+ + Sbjct: 178 DDPTKYQDLRIGRINAILVDR--LAALDLVKKTGDTLAVAGPAFSRQESGVAVRKT 231 >gi|224498994|ref|ZP_03667343.1| hypothetical protein LmonF1_04543 [Listeria monocytogenes Finland 1988] gi|254831313|ref|ZP_05235968.1| hypothetical protein Lmon1_08142 [Listeria monocytogenes 10403S] Length = 486 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 53/278 (19%), Positives = 105/278 (37%), Gaps = 24/278 (8%) Query: 1 MYKDF---FVSILCLIILFFTSFS------TNASILGDIKKRGFLKCGINTGLVGFAE-- 49 M K F +IL + I+ F+ F+ T L I+++G L G++ + Sbjct: 1 MQKHLLQKFAAILLVFIVVFSGFTSVFAADTEDQTLAKIQEKGVLTVGLSADYPPYEFHQ 60 Query: 50 -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + GFDV ++ + K+ +N +L++ +ID++ T Sbjct: 61 TIDGKDKVVGFDVSIAEKIAKDL---DVKLDIKEMNFDSLLGSLKTGKIDMIISGMSPTP 117 Query: 109 LREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 R+ + F Q ++ K K +SV+ SG + Q TT E + + Sbjct: 118 ERQKEVDF--SDPYMFVQQRVVIRKTDKDKFTSVNDFSGVKVGAQKQTTQE----ELAQN 171 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + ++V ++ ++++ DA + A + + I SK Sbjct: 172 ELVGSEVVSLQKVPDLILNLKSNKVDAVVLEGPVAEAYISQDKTLAMADIKFANGSKET- 230 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 A A+ +G T V+ + + L QK N++ Sbjct: 231 AIAMPKGSTALQEKVNASIKDIQDTGLLKEYQKEANKL 268 >gi|329116401|ref|ZP_08245118.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus parauberis NCFD 2020] gi|326906806|gb|EGE53720.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus parauberis NCFD 2020] Length = 278 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 40/275 (14%), Positives = 91/275 (33%), Gaps = 16/275 (5%) Query: 1 MYKDFFVSILCLIILFFTSF-----STNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 + K ++ + + + ST + + KK + G + V +G Sbjct: 3 LKKLILTAMTAFMAIILVACGSKESSTKSDGWANYKKTKTITLGFDNTFVPMGYKDESGK 62 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFDV+ +A+ K+++ P+N + L++ +ID++ T R+ + Sbjct: 63 NTGFDVELAKAVFDQYG---IKVKFQPINWDLKETELKNGKIDMIWNGYSITKERQAKVA 119 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI- 174 + Q + K I+S S + G + Q+G++ K Sbjct: 120 F--SNPYMKNEQVLVTKKSANITSFSGMKGKVLGAQSGSSGYDAFTSNPKVLKDIVKDKD 177 Query: 175 --VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 +E + ++ R D D + + I+ A + + Sbjct: 178 ATQYETFTQAFIDLKSGRIDGLLIDKVYANYYLKQEGELANYNIVKSEYEGENFAVGVRK 237 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 D ++ + + + G Q+ N+ + Sbjct: 238 EDKTLVKNLNKSLKKLY---KDGKFQEISNKWFGE 269 >gi|254826861|ref|ZP_05231548.1| his/Glu/Gln/Arg/opine ABC transporter permease [Listeria monocytogenes FSL N3-165] gi|258599240|gb|EEW12565.1| his/Glu/Gln/Arg/opine ABC transporter permease [Listeria monocytogenes FSL N3-165] Length = 486 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 53/278 (19%), Positives = 105/278 (37%), Gaps = 24/278 (8%) Query: 1 MYKDF---FVSILCLIILFFTSFS------TNASILGDIKKRGFLKCGINTGLVGFAE-- 49 M K F +IL + I+ F+ F+ T L I+++G L G++ + Sbjct: 1 MQKHLLQKFAAILLVFIVVFSGFTSVFAADTEDQTLAKIQEKGVLTVGLSADYPPYEFHQ 60 Query: 50 -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + GFDV ++ + K+ +N +L++ +ID++ T Sbjct: 61 TIDGKDKVVGFDVSIAEKIAKDL---DVKLDIKEMNFDSLLGSLKTGKIDMIISGMSPTP 117 Query: 109 LREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 R+ + F Q ++ K K +SV+ SG + Q TT E + + Sbjct: 118 ERQKEVDF--SDPYMFVQQRVVIRKTDKDKFTSVNDFSGVKVGAQKQTTQE----ELAQN 171 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + ++V ++ ++++ DA + A + + I SK Sbjct: 172 ELVGSEVVSLQKVPDLILNLKSNKVDAVVLEGPVAEAYISQDKTLAMADIKFANGSKET- 230 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 A A+ +G T V+ + + L QK N++ Sbjct: 231 AIAMPKGSTALQEKVNASIKDIQDTGLLKKYQKEANKL 268 >gi|309779619|ref|ZP_07674378.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Ralstonia sp. 5_7_47FAA] gi|308921560|gb|EFP67198.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Ralstonia sp. 5_7_47FAA] Length = 282 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 47/237 (19%), Positives = 90/237 (37%), Gaps = 12/237 (5%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDW-KGFDVDFCRALSSAIFDDPSKIQYLPL 83 + L I++R + G+ F + GF+VD +AL + + ++ + + Sbjct: 33 ATLDKIQQRKKIVVGVVLSGGPFGSIDPVTQRGTGFNVDLAQALGRGLGVE---VETVQV 89 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF-IMHKKKGISSVSQ 142 R LQ ++D+L + R + LA P Y+ G ++ + + S Sbjct: 90 QPSNRVQFLQQGRVDVLVAAMELNPER--AELLAHVPTPYYRVGGVALVAQDSPVHQWSD 147 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G +C+ G++ L A ++ P F+ E A R + C A D + L Sbjct: 148 LKGKDVCLSQGSSYAKPL-----AADIGATPKGFKSPAESLLALRGNNCAAAVHDATLLQ 202 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L +N ++ I+ + SP +G+ + + L T+K Sbjct: 203 PLPRSNPEWKDYRIVGPDLIPSPTVIWARKGENDTVAALDRIVQGWHRTGWLIETEK 259 >gi|322388044|ref|ZP_08061650.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus infantis ATCC 700779] gi|321141065|gb|EFX36564.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus infantis ATCC 700779] Length = 280 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 50/284 (17%), Positives = 98/284 (34%), Gaps = 18/284 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDI------KKRGFLKCGINTGLVGFAEVKANG 54 M + +L + FF T + + +++ + G + V + NG Sbjct: 1 MNRKKISLVLVFFLAFFLVGCTQKASNPKVDNWEKYQQQESITIGFDNTFVPMGFEEKNG 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + GFD+D +A+S + K+Q+ P++ + LQ+ ID + T R + Sbjct: 61 QYVGFDIDLAQAVSEKLGF---KVQFQPIDWDMKETELQNGTIDAIWNGYSATDERREKV 117 Query: 115 GLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMK 170 I Y + Q ++ KK I SVS ++G + QAG++ + + K Sbjct: 118 AFT---IPYMENQQVLVSKKSQNIQSVSDMTGKVLGAQAGSSGYIDFEARPELLKNIVKD 174 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 ++ E + R DA D T ++ I+P A + Sbjct: 175 QKANQYQSFNEALIDLQNDRIDALLIDRVYANYYLETEGILDQYEIIPAGFESESFAVGV 234 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 D ++ + + K +D ++ Sbjct: 235 RPADKTLLANLNKAFEELYQEGKFQEISK--KWFGEDVATNQIK 276 >gi|186472109|ref|YP_001859451.1| extracellular solute-binding protein [Burkholderia phymatum STM815] gi|184194441|gb|ACC72405.1| extracellular solute-binding protein family 3 [Burkholderia phymatum STM815] Length = 269 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 39/243 (16%), Positives = 85/243 (34%), Gaps = 16/243 (6%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 +A L I K G ++ G+ F + + +G+D++ + ++ K++ + Sbjct: 32 AHADALDTITKAGVVRVGVFMDYPPFGSIGPDMKPQGYDIEVANLIGKSLG---VKVELV 88 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 + R L + D+L + T RE + + Y+ K + + Sbjct: 89 AVTGDNRMAYLADHKADMLL-SVGQTPEREKVIDFSQPYAPYY--LAVFGPKSLKVKDAN 145 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT--GDIS 199 L+G SI V GT +L++ + F+ +A+ + + D+ Sbjct: 146 DLAGKSISVARGTLEDLSVTKIAP---PSANIKRFDDPNGAISAFLSGQVQLMVVGNDVG 202 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQ 258 A + + P + + SP + + + V T + I+Q Sbjct: 203 ATILARHPANDPEQ----KFSLFSSPDHVGLNKNEPRLLKKVDDTIARARKDGTMNAISQ 258 Query: 259 KNI 261 K + Sbjct: 259 KWL 261 >gi|254899048|ref|ZP_05258972.1| hypothetical protein LmonJ_04529 [Listeria monocytogenes J0161] gi|254912811|ref|ZP_05262823.1| conserved hypothetical protein [Listeria monocytogenes J2818] gi|254937138|ref|ZP_05268835.1| arpJ [Listeria monocytogenes F6900] gi|284802697|ref|YP_003414562.1| hypothetical protein LM5578_2453 [Listeria monocytogenes 08-5578] gi|284995839|ref|YP_003417607.1| hypothetical protein LM5923_2404 [Listeria monocytogenes 08-5923] gi|258609741|gb|EEW22349.1| arpJ [Listeria monocytogenes F6900] gi|284058259|gb|ADB69200.1| hypothetical protein LM5578_2453 [Listeria monocytogenes 08-5578] gi|284061306|gb|ADB72245.1| hypothetical protein LM5923_2404 [Listeria monocytogenes 08-5923] gi|293590807|gb|EFF99141.1| conserved hypothetical protein [Listeria monocytogenes J2818] Length = 486 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 53/278 (19%), Positives = 105/278 (37%), Gaps = 24/278 (8%) Query: 1 MYKDF---FVSILCLIILFFTSFS------TNASILGDIKKRGFLKCGINTGLVGFAE-- 49 M K F +IL + I+ F+ F+ T L I+++G L G++ + Sbjct: 1 MQKHLLQKFAAILLVFIVVFSGFTSVFAADTEDQTLAKIQEKGVLTVGLSADYPPYEFHQ 60 Query: 50 -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + GFDV ++ + K+ +N +L++ +ID++ T Sbjct: 61 TIDGKDKVVGFDVSIAEKIAKDL---DVKLDIKEMNFDSLLGSLKTGKIDMIISGMSPTP 117 Query: 109 LREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 R+ + F Q ++ K K +SV+ SG + Q TT E + + Sbjct: 118 ERQKEVDF--SDPYMFVQQRVVIRKTDKDKFTSVNDFSGVKVGAQKQTTQE----ELAQN 171 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + ++V ++ ++++ DA + A + + I SK Sbjct: 172 ELVGSEVVSLQKVPDLILNLKSNKVDAVVLEGPVAEAYISQDKTLAMADIKFANGSKET- 230 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 A A+ +G T V+ + + L QK N++ Sbjct: 231 AIAMPKGSTALQEKVNASIKDIQDTGLLKKYQKEANKL 268 >gi|73537420|ref|YP_297787.1| extracellular solute-binding protein [Ralstonia eutropha JMP134] gi|72120757|gb|AAZ62943.1| extracellular solute-binding protein, family 3 [Ralstonia eutropha JMP134] Length = 266 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 53/260 (20%), Positives = 91/260 (35%), Gaps = 12/260 (4%) Query: 13 IILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI 71 +L FT+ + +A +L +K G LK G+ F G GFDV RA++ + Sbjct: 15 TVLGFTAPAVHAEDLLDTVKASGVLKVGMEGTYPPFGYRNGQGQLDGFDVAVARAVADKM 74 Query: 72 FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131 K+Q++ LQ+ + D++ T R+ +L + Sbjct: 75 G---LKVQFITTEWSGIIAGLQAGKFDVIVNQVSMTPARKQALDFTQPYVYSAVQVLQRS 131 Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191 + K+ S+ L G S+ V G+ AD K+ + E A R Sbjct: 132 NDKREFGSLDALKGKSVGVTLGS----NYADLAKS-VPGIQVQTYPGTSENLRDLAAGRI 186 Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 DA D L L + P L +K + +G+ ++ + A+ Sbjct: 187 DAALNDRLMLPYLIKNANLPLRTGAL-LAGTKLEMGIPYRKGNPKFAKAIDDALIALQQD 245 Query: 252 EELGITQKNINQVSKDTTNP 271 L I + D + P Sbjct: 246 GTLRKLS--IEWLGTDASQP 263 >gi|169334069|ref|ZP_02861262.1| hypothetical protein ANASTE_00462 [Anaerofustis stercorihominis DSM 17244] gi|169258786|gb|EDS72752.1| hypothetical protein ANASTE_00462 [Anaerofustis stercorihominis DSM 17244] Length = 269 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 42/267 (15%), Positives = 86/267 (32%), Gaps = 9/267 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIK-KRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + +L L ++ + S + K G + + +G++ GF Sbjct: 1 MKKKLAL-VLALFMVAGLTLFGCGSKDENAKNDDKTFVVGFDAEFPPYGYKDDDGNYIGF 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D + + + ++ P++ + + + S ID + + Sbjct: 60 DLDLAQEVCDR---NGWTLKKQPVDWDSKDMEIDSGTIDCIWNGFTMN---GREDDYTWT 113 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY-HPIVFER 178 + Q +++KK GI + L G ++ Q ++ L K + Sbjct: 114 KPYIDNKQIIVVNKKTGIKNFKGLKGKTVETQKDSSALAALQGDQKKLASTFATLTEVAD 173 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + CDA DI + S+ +L ++IS A +G+TE Sbjct: 174 YNSAFMDLESGACDAIAMDIGVANYQINSRKNASDFEVLDEVISSEKYAVGFKKGNTELR 233 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVS 265 + V T M + Sbjct: 234 DKVQKTLDEMAKDGTVNKIADKYADFG 260 >gi|296274364|ref|YP_003656995.1| family 3 extracellular solute-binding protein [Arcobacter nitrofigilis DSM 7299] gi|296098538|gb|ADG94488.1| extracellular solute-binding protein family 3 [Arcobacter nitrofigilis DSM 7299] Length = 268 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 47/271 (17%), Positives = 98/271 (36%), Gaps = 16/271 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K +IL +++F + +K+ LK G+ F +G+ G V Sbjct: 1 MKKLLFAILSSLLVFILAGCGENEKEQKSEKK-VLKVGMELAYPPFEMSDKDGNPSGVSV 59 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 DF +AL + D + + +L++ +ID++ + T R+ S+ + Sbjct: 60 DFAKALGKYLGRD---VVIENIAWDGLIPSLKTGKIDLIISSMTITDERKKSIDFSI--P 114 Query: 122 TYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + +K GI S+ L G ++ V+ G+T + ++ N +VF++ Sbjct: 115 YAQSSLAILANKDSGIKSIDDLNVKGKTVAVKKGSTGHIYAKEHLPNAN----VLVFDKE 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + D + D +Y + + ++ P A+ +G Sbjct: 171 AACVLEVVQGKADGFIYDQLTIYKNYAKHMDTTVPLLQPFQKDFEYWGVALKKGSP---- 226 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 + + + A+E G K N+ D Sbjct: 227 LKADVDAFIKKAKEDGTFDKLANKYLSDAKK 257 >gi|116617694|ref|YP_818065.1| amino acid ABC transporter periplasmic protein [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116096541|gb|ABJ61692.1| amino acid ABC transporter substrate-binding protein, PAAT family [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 284 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 44/280 (15%), Positives = 90/280 (32%), Gaps = 27/280 (9%) Query: 1 MYKD---------FFVSILCLIILFFTSFSTNA----------SILGDIKKRGFLKCGIN 41 M K F++++ + L ++ S + IK+ + G++ Sbjct: 4 MKKKIVVNSIVGILFIALVVMAALSLSNNSQKSKSTEQTVVKTDQWSRIKREKQITIGLD 63 Query: 42 TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101 V +G GFDVD A+ ++ K+++ P++ + L + ID + Sbjct: 64 DTFVPMGFRDKSGKLVGFDVDLATAVFKSLG---IKVKWQPIDWSMKETELNTGNIDAIW 120 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 T R+ + + Q + KK I+ S + + Q ++ + T A Sbjct: 121 NGYTITDDRKKKVAF--STPYHKATQVLVTLKKSNINKFSDMQDKVLGDQTASSGDQTFA 178 Query: 162 DY---FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218 Y K + I ++ ++ A R D D P+++ I Sbjct: 179 QYPKVLKQYVKDQKVIGYDTFDKAFNDLNASRIDGLLIDEDYARYYVAHQSNPNDYTITT 238 Query: 219 DIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 + A + D + V+ L Sbjct: 239 GGFPVNDNAVGFRKADKKLRQAVNKELKTYKKDGRLQKYS 278 >gi|303230444|ref|ZP_07317205.1| bacterial extracellular solute-binding protein, family 3 [Veillonella atypica ACS-049-V-Sch6] gi|302514983|gb|EFL56964.1| bacterial extracellular solute-binding protein, family 3 [Veillonella atypica ACS-049-V-Sch6] Length = 270 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 45/271 (16%), Positives = 92/271 (33%), Gaps = 13/271 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K V + + ++ F S + + D + + G++ G+ G D+ Sbjct: 4 KKIMAVGLAAVSMMAFVSGCGSDTKNADTQLPKKIVIGLDDSFPPMGFKDDKGEIVGLDI 63 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D + + D +++ ++ + L+SK+ID+L + RE ++ Sbjct: 64 DLAKEAAKRAGMD---VEFKAIDWSSKEAELKSKKIDVLWNGLTVSPEREKNILF--SDT 118 Query: 122 TYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 D Q ++ I S L+G + VQ +T E L + +K + Sbjct: 119 YMKDKQYIVVRNDDNAIKGKSDLAGKVVGVQQASTGESALQNDPSGKTVK-EIKSYADFV 177 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL-PDIISKSPLAPAIIQGDTEWYN 239 R DA D A L P ++ I+ A + DT + Sbjct: 178 SAFMDLGIGRVDAVIADGVI--ARYLMTKEPGKYKIVEGTDYGVDNFAVGFRKDDTALRD 235 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 ++ M ++ G K + + + + Sbjct: 236 KINGILAEM---KKDGTADKIVEKWLGSSAD 263 >gi|170731786|ref|YP_001763733.1| extracellular solute-binding protein [Burkholderia cenocepacia MC0-3] gi|254246506|ref|ZP_04939827.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Burkholderia cenocepacia PC184] gi|124871282|gb|EAY62998.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Burkholderia cenocepacia PC184] gi|169815028|gb|ACA89611.1| extracellular solute-binding protein family 3 [Burkholderia cenocepacia MC0-3] Length = 266 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 93/257 (36%), Gaps = 14/257 (5%) Query: 17 FTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 FT+ + +A +L +KK G L+ G+ F +G +GFDVD A++ + Sbjct: 19 FTAVAAHADDLLDSVKKAGVLRVGLEGTYPPFNSRGTSGQLEGFDVDVANAVAGKLG--- 75 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK- 134 K Q++P LQ+ + D++ T R+ +L + P TY Q Sbjct: 76 VKTQFIPTEWSGIIAGLQAGKFDVIVNQVTITPQRKEALDFSE-PYTYSAAQLIQRKDDT 134 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 + S+ G + V GT D + E A R +A Sbjct: 135 RNFKSLDDFKGKKLGVTLGTNY-----DQMARTVPGIEVQTYPGAPEKLRDLAAGRIEAT 189 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D L + T++ P + + + +A +G+ ++ ++ ++ L Sbjct: 190 LDDRLMLPYMIKTSNLPLRSGAVLNGGKQE-MAIPFRKGNPKFEKAINDALESLRKDGTL 248 Query: 255 GITQKNINQVSKDTTNP 271 ++ D T P Sbjct: 249 KKIS--MHWFGSDVTVP 263 >gi|254252492|ref|ZP_04945810.1| ABC-type amino acid transport/signal transduction systems periplasmic component [Burkholderia dolosa AUO158] gi|124895101|gb|EAY68981.1| ABC-type amino acid transport/signal transduction systems periplasmic component [Burkholderia dolosa AUO158] Length = 264 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 57/277 (20%), Positives = 102/277 (36%), Gaps = 21/277 (7%) Query: 1 MYKDFFVSILCLIILFFT---SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M +L ++ + + + A +L +K+RG L+ G+ F GD Sbjct: 1 MKFSLLKKLLVAGVIGTSFAAATAHAADLLDQVKQRGTLRIGLEGTFPPFNSKSPQGDLV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD +A+++ + +P +++ LQ+ + D++ T R+ +L Sbjct: 61 GFDVDIAKAVAAKLGVNP---EFVTTEWSGIIAGLQAGKFDVIVNQVGITDKRKETLDF- 116 Query: 118 FRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 P + I K S+ L G + V G T + +A ++K +P Sbjct: 117 -SPAYTYSSAQLIQRKDDTREFKSLEDLKGKKLGVALG-TNYMDMAKSVPGIDVKTYPGA 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 E A R DA D L L + P ++ S +P +G+ Sbjct: 175 ----PEYLRDLAAGRLDAALNDRLMLAYLTKNSQLP--LRPGANVGSANPSGIPFKKGNP 228 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSK-DTTNP 271 ++ + AM E G K ++ D T P Sbjct: 229 KFQKAIDD---AMTQLEADGTFTKISDKWFGVDVTKP 262 >gi|298530982|ref|ZP_07018383.1| extracellular solute-binding protein family 3 [Desulfonatronospira thiodismutans ASO3-1] gi|298509005|gb|EFI32910.1| extracellular solute-binding protein family 3 [Desulfonatronospira thiodismutans ASO3-1] Length = 253 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 52/274 (18%), Positives = 99/274 (36%), Gaps = 25/274 (9%) Query: 1 MYKD-FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKG 58 M + FF+ +L + +F + F+++ L ++T V F ++ G++ G Sbjct: 1 MKRSGFFLCLLLGVFMFMSMFASS-------LHAKKLTVAVDTAFVPFEFRDSDTGEYVG 53 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD+D A++ + + + P++ ALQ+ +D T RE + + Sbjct: 54 FDIDLWDAIADRLGVE---YELQPMDFSGIVPALQTGSVDAALAGITITAEREKVVDFSH 110 Query: 119 RPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y G ++ K I + G +I V+ GTT+ A + F Sbjct: 111 --PYYDSGLSIMVMKDNDEIQGPEDIEGRTIAVRTGTTSADHAPRLNPA-----DIVQFP 163 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 +E RA R DA D + T + P + S+S G Sbjct: 164 NIEAAYMEVRAGRVDAAMHDTPNVLYYIQTAGDDQVKAVGPRMQSQS-YGIGFPLGS--- 219 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + + + A + + G + + + NP Sbjct: 220 -ELRNDVNVAFLELVDSGEYAEIYKKWFGEAPNP 252 >gi|229816477|ref|ZP_04446777.1| hypothetical protein COLINT_03530 [Collinsella intestinalis DSM 13280] gi|229807944|gb|EEP43746.1| hypothetical protein COLINT_03530 [Collinsella intestinalis DSM 13280] Length = 329 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 47/250 (18%), Positives = 96/250 (38%), Gaps = 15/250 (6%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRAL 67 ++ + + ++ IK G ++ G+ + F+ + +G +GFD + L Sbjct: 65 LIASGAVADDATIASSEWAQKIKDAGTMRLGVVQTSMLFSLLNEKDGKLRGFDAGLSQLL 124 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 I D SK + + + R LQ+ Q+D + T R+ + A Y Q Sbjct: 125 VRYILGDESKFEATQVTSDTRESVLQNDQVDAVFATYSITEDRKKLISFA--GPYYGTQQ 182 Query: 128 GFIM-HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 ++ I+SV L+G ++ Q+G+T + + F+ EE +A Sbjct: 183 SILVLADNDDIASVDDLAGKNVAAQSGSTGPSIMEEVCPDA----KLQEFKTDEEARSAL 238 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAIIQGDTEWYNIVSWTH 245 R DAY D + L++ + +P ++ + + + V++ + Sbjct: 239 AQGRVDAYVIDRNMLFSDMM--KQPGKYKMAGEPFGPEDLYGIGLPLDSDG----VAFVN 292 Query: 246 YAMVTAEELG 255 + EE G Sbjct: 293 AFLTKVEEDG 302 >gi|293572977|ref|ZP_06683920.1| amino acid ABC transporter, amino acid-binding protein [Enterococcus faecium E980] gi|291606955|gb|EFF36334.1| amino acid ABC transporter, amino acid-binding protein [Enterococcus faecium E980] Length = 260 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 40/248 (16%), Positives = 82/248 (33%), Gaps = 11/248 (4%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 ++ +A I + + G++ V +G GFD+D +A+ Sbjct: 21 SNKKASADNWAAINEEKKIVIGLDDTFVPMGFRDKDGKLTGFDIDLAKAVFEQYG---IT 77 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 + + P++ + L + ID++ T RE + + Q I K+ GI Sbjct: 78 VDFQPIDWSMKEFELNNGTIDLIWNGYSKTPAREKKVQF--TKPYMENDQVLITPKESGI 135 Query: 138 SSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 +S Q+ + Q G++ + K ++++ E ++ R D Sbjct: 136 TSFEQMKNKRLGAQNGSSGYDVFTKQPEVLKEIVKNQDAVLYDSFNEALIDLKSGRIDGL 195 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D + + + A + + D V + A E+ Sbjct: 196 LMDKVYADYYLKQRNELEDFNMTKGSYESEDFAVGVRKSDDTL---VKKINEAFDRLEKT 252 Query: 255 GITQKNIN 262 G QKN+ Sbjct: 253 GEFQKNLQ 260 >gi|226944240|ref|YP_002799313.1| ABC transporter substrate binding protein, family 3 [Azotobacter vinelandii DJ] gi|226719167|gb|ACO78338.1| ABC transporter, substrate binding protein, family 3 [Azotobacter vinelandii DJ] Length = 292 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 45/252 (17%), Positives = 93/252 (36%), Gaps = 13/252 (5%) Query: 4 DFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDV 61 ++ +L + +A L I++R + G+ F + + G++V Sbjct: 16 KALAALFGATLLAVAGSAAHADATLEKIRERNRISVGVILSGPPFGTIDPVTREHLGYNV 75 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + + ++ + ++ + + A R LQ ++DIL N T R + L + P Sbjct: 76 ELAKGIAKTLGVG---LETVSVLAPNRVQFLQQGKVDILIANMQLTEER--TQILDYVPT 130 Query: 122 TYFD-GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + G G ++ K GI++ L G +CV G+ L + + A F Sbjct: 131 PYEEVGGGALIRKGSGIANWEDLKGKPVCVSQGSNFIKPLVETYGA-----EIKAFRSQS 185 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + R + C A + L + + LP+ + SP + +G+ + Sbjct: 186 ESLLSLRGNGCVAAVHVGPTMRTLLKEPEWADYELPLPNDLIPSPSVIWVRKGEKDIQAR 245 Query: 241 VSWTHYAMVTAE 252 + + Sbjct: 246 LDAIVRDWHRSG 257 >gi|269926019|ref|YP_003322642.1| extracellular solute-binding protein family 3 [Thermobaculum terrenum ATCC BAA-798] gi|269789679|gb|ACZ41820.1| extracellular solute-binding protein family 3 [Thermobaculum terrenum ATCC BAA-798] Length = 307 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 48/242 (19%), Positives = 83/242 (34%), Gaps = 12/242 (4%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDP 75 T+ S+ A L I G+L G + V G G DVD AL+ A+ Sbjct: 58 TTAASSPAPQLKLIND-GYLTVGTDASYPPMESVDPKTGQIVGADVDLANALAKAMGLKG 116 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 +K+ + + ALQ + DI+ + + T R + G ++ Sbjct: 117 AKM--VNNSFDTIIAALQRGKFDIIMSSMNDTPERRQQVDFVD---YMTASIGIVVPSDS 171 Query: 136 GIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 I S L G +I VQ GT L + K F + + A + D Sbjct: 172 NIKADSYKDLCGYTISVQRGTVELDELQKVNEQCTKKMTLKTFTQDTDAWQALVSGHVDV 231 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISK-SPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 YT D+ + PS+ + + S A+ + + + ++ + + Sbjct: 232 YTSDLPVTA--FHIKENPSKFKLAGEPFSAGQNYGIAVPKNRQDLKDALAKALEQIRASG 289 Query: 253 EL 254 E Sbjct: 290 EY 291 >gi|331014465|gb|EGH94521.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 266 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 46/253 (18%), Positives = 90/253 (35%), Gaps = 11/253 (4%) Query: 11 CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSS 69 L + + F + L +++R L G+ F + +G +V+ + Sbjct: 4 VLASIAVSGFVLADATLDKVQERHRLVVGVLLSGGPFGSIDPQTRKPQGVNVELAEDIGK 63 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 + + ++ + + R LQ ++D+L N +WT R LG + Y G Sbjct: 64 RLGVE---VELVSVLTANRVQFLQQGKVDLLIANMEWTPERGQLLG-SVPTPFYRVGGTA 119 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 + K I+ L G +C G++ L ++ F+ E A R + Sbjct: 120 AVLKDSAITRWEDLKGQPVCTSQGSSYIKALTEF------GADIKAFKSSSESLLALRGN 173 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 C A D + + L ND + + ++ +P G+T+ N + Sbjct: 174 NCVAAVHDATLINPLLAGNDEWKGYRAIAPELNPAPSVIWTRSGETDTQNRLDSIVQDWH 233 Query: 250 TAEELGITQKNIN 262 + L +K N Sbjct: 234 RSGWLIELEKRYN 246 >gi|319638612|ref|ZP_07993374.1| histidine-binding protein [Neisseria mucosa C102] gi|317400361|gb|EFV81020.1| histidine-binding protein [Neisseria mucosa C102] Length = 270 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 51/258 (19%), Positives = 92/258 (35%), Gaps = 16/258 (6%) Query: 1 MYKDFFVSILCLIILFFTSF--STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K ++ C + S NAS D + G N F + + G +G Sbjct: 3 MKKWLATALACSALALTACGGQSNNASAPAD----KVYRVGSNAEFAPFESLDSAGKVEG 58 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD A++ A K+++ + F +L + +DI+ T R+ S+ Sbjct: 59 FDVDLMNAMAKA---GNFKVEFKHQPWESLFPSLNNGDVDIVMSGVTITDDRKQSMLF-- 113 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSG-ASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + Q ++ K K ++S L A + V G T + +++ N FE Sbjct: 114 SDPYFEITQVVLVPKGKKVASSEDLKNMAKVGVVTGYTGDFSVSKLLG--NDNPKIARFE 171 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS-EHVILPDIISKSPLAPAIIQGDTE 236 V I D+ D + + N + + LPD + A +GD Sbjct: 172 SVPLIIKELENGGLDSVVSDSAVIANYVKNNPTKGLDFISLPD-FTIENYGIAARKGDEA 230 Query: 237 WYNIVSWTHYAMVTAEEL 254 +++ + + E Sbjct: 231 TIKMLNDALKKVRESGEY 248 >gi|330819483|ref|YP_004348345.1| extracellular solute-binding protein family 3 [Burkholderia gladioli BSR3] gi|327371478|gb|AEA62833.1| extracellular solute-binding protein family 3 [Burkholderia gladioli BSR3] Length = 257 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 44/264 (16%), Positives = 93/264 (35%), Gaps = 16/264 (6%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 ++LC+ L T + A + L + V G GFD+D Sbjct: 3 LKALLCVASLGMTLLTAIAPGTASAQASSVLNVATDATFPPMEFVD-KGQRTGFDIDIMN 61 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 AL+ A+ ++Q+ ++ K L +++ D T R + + Sbjct: 62 ALAKAMGK---QVQWTDIDFKGLVPGLVARRFDAAISGIYITPERAQVVDFTQS--YFAG 116 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 G ++ I +++ L+G + VQ GT + L D + + + E+ +E+ Sbjct: 117 GLSVLVKADSPIKTLADLNGKKVSVQVGTKSVNFLRDNYP----QVQRVEVEKNQEMFDL 172 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 R DA A + RP +L ++ A+ + +++ + ++ Sbjct: 173 VGIGRADAAVTGKP--AAYQFARTRPG-FRVLDKELTTEAYGIAVRKDESQLRDQMNAAL 229 Query: 246 YAMVTAEELGITQKNINQVSKDTT 269 A + A G + + + Sbjct: 230 -AKIKA--DGTYDAIVKKWFGSSA 250 >gi|284052353|ref|ZP_06382563.1| solute-binding family protein 3 [Arthrospira platensis str. Paraca] Length = 282 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 48/253 (18%), Positives = 92/253 (36%), Gaps = 24/253 (9%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI--- 71 + FT + ++L I + G L+ G+ T V F+ + NGD +G+ VD R + + Sbjct: 16 VGFTGVAGAETVLEQIGRTGVLRAGVRTDAVPFSYLNDNGDIEGYSVDLIRLIHGRLEEK 75 Query: 72 FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131 + P +++ + ++RF +Q +D++ T T RE G+ F + G ++ Sbjct: 76 LNQPIRLEMTTVTLQDRFDQVQQGNLDLVCEATSITAERE--NGVDFSTPFFVTGIQMLV 133 Query: 132 HK------------KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + IS+VS L +I TTT+ L + + P Sbjct: 134 KTENSDRLDPTQLSETDISTVS-LERVTIGFLESTTTDSELRPVYPEAQWEAVP----SR 188 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILP-DIISKSPLAPAIIQGDTEW 237 E + D L + ++P ++ + EW Sbjct: 189 AEGIRLLQEGELQGIVSDGILLLGQLWKDGGTRENFQLVPSQPLTFENYGCILPMNSREW 248 Query: 238 YNIVSWTHYAMVT 250 +V+ T + Sbjct: 249 SRVVNSTIASPEN 261 >gi|78065025|ref|YP_367794.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia sp. 383] gi|77965770|gb|ABB07150.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia sp. 383] Length = 266 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 93/257 (36%), Gaps = 14/257 (5%) Query: 17 FTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 FT+ + +A +L +KK G L+ G+ F +G +GFDVD A++ + Sbjct: 19 FTAVAAHADDLLDSVKKAGVLRVGLEGTYPPFNSRGTSGQLEGFDVDVANAVAGKLG--- 75 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK- 134 K Q++P LQ+ + D++ T R+ +L + P TY Q Sbjct: 76 VKTQFIPTEWSGIIAGLQAGKFDVIVNQVTITPQRKEALDFSE-PYTYSAAQLIQRKDDT 134 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 + S+ G + V GT D + E A R +A Sbjct: 135 RNFKSLDDFKGKKLGVTLGTNY-----DQMARTVPGIEVQTYPGAPEKLRDLAAGRIEAT 189 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D L + T++ P + + + +A +G+ ++ ++ ++ L Sbjct: 190 LDDRLMLPYMIKTSNLPLRAGAVLNGGKQE-MAIPFRKGNPKFEKAINDALDSLRKDGTL 248 Query: 255 GITQKNINQVSKDTTNP 271 ++ D T P Sbjct: 249 KKIS--MHWFGSDVTVP 263 >gi|222109926|ref|YP_002552190.1| family 3 extracellular solute-binding protein [Acidovorax ebreus TPSY] gi|221729370|gb|ACM32190.1| extracellular solute-binding protein family 3 [Acidovorax ebreus TPSY] Length = 266 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 37/271 (13%), Positives = 84/271 (30%), Gaps = 15/271 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG-----FLKCGINTGLVGFAEVKANGD 55 M K V++L L + + + G++ + Sbjct: 1 MKKFAAVALLTLGAVLVGCSKQEPAAPAAAPAPAPAAVTKIVVGLDDNFPPMGFRDEKNE 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFD+D + + + + +++ P++ + L K++D L T R+ ++ Sbjct: 61 LVGFDIDMAKEAAKRLGVE---VEFKPIDWSAKEAELSGKRVDALWNGLTITEERKQNIL 117 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + Q ++ I + + L+G + Q G++ + Sbjct: 118 F--TAPYMENHQIIVVPAGSVIKAKADLAGKVVGAQEGSSAVDAIKKEEAVFKSFKELKT 175 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F R +A D + +P ++ +L D + + DT Sbjct: 176 FGDNVTALMDLTTGRLEAVVVD--EVVGRYYVAKKPDQYAVLDDNFGTEEYGVGVRKDDT 233 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 E + + A+ ++ G K Q Sbjct: 234 ELHGKLD---KALADMKQDGSAAKIAEQWFG 261 >gi|78059833|ref|YP_366408.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia sp. 383] gi|77964383|gb|ABB05764.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia sp. 383] Length = 274 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 38/257 (14%), Positives = 85/257 (33%), Gaps = 15/257 (5%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 + L + +A L I K G ++ G+ F + + G+D+D Sbjct: 20 LLCACAGTAGLAAFAPLAHADALDTIAKSGVVRIGVFEDYPPFGSIGPDMKPLGYDIDMA 79 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 + A+ +K++ + + R L ++ D+L + T R + + Y+ Sbjct: 80 NLIGKAL---NAKVELVQVTGDNRMAYLADRKTDMLL-SVGQTPERAKVIDFSNAYAPYY 135 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 K + + L+G S+ V GT +L+++ F+ A Sbjct: 136 --LAVFGPKSLAVKGNADLAGKSVAVARGTLEDLSVSKVAP---PSATIKRFDDPNGAIA 190 Query: 185 AYRAHRCDAYT--GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A+ + + D+ A + + P + + SP + + + V+ Sbjct: 191 AFLSGQAQLLVVGNDVGATIIARHPSIDPEQ----KFSLFSSPDHVGLNKNEPRLMQKVN 246 Query: 243 WTHYAMVTAEELGITQK 259 + L + Sbjct: 247 DAIAGARKSGTLNALSQ 263 >gi|311106237|ref|YP_003979090.1| extracellular solute-binding protein, family 3 family protein 5 [Achromobacter xylosoxidans A8] gi|310760926|gb|ADP16375.1| bacterial extracellular solute-binding protein, family 3 family protein 5 [Achromobacter xylosoxidans A8] Length = 263 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 43/258 (16%), Positives = 87/258 (33%), Gaps = 11/258 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKR---GFLKCGINTGLVGFAEVKANGDWK 57 M K V + L ++ + + + G++ +N Sbjct: 1 MKKLTAVLLASATALLTACGPSDNAPAAGAQAPAAAKKVVVGLDDNFPPMGFRDSNNQIV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D + S + ++++ P++ + L K++D+L T R+ ++ Sbjct: 61 GFDIDMAKEASKRLG---LEVEFKPIDWSAKEAELNGKRVDVLWNGLTITEERKKNISF- 116 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + Q I+ + + L+G + Q G++ +A A +K F Sbjct: 117 -TAPYMANHQIIIVGNASPVKLKADLAGKVVGAQDGSSATDAIAKDPVAAQIK-EVKKFG 174 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 A R DA D + L + R E+ +L + + + DTE Sbjct: 175 DNVTALMDLAAGRLDAIVVD--EVVGRYLISKRAGEYRVLDENFGTEDYGVGVRKDDTEL 232 Query: 238 YNIVSWTHYAMVTAEELG 255 + T +M G Sbjct: 233 LGKLDKTLDSMKQDGTAG 250 >gi|115350421|ref|YP_772260.1| extracellular solute-binding protein [Burkholderia ambifaria AMMD] gi|170698931|ref|ZP_02889991.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] gi|172059445|ref|YP_001807097.1| extracellular solute-binding protein [Burkholderia ambifaria MC40-6] gi|115280409|gb|ABI85926.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia ambifaria AMMD] gi|170136184|gb|EDT04452.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] gi|171991962|gb|ACB62881.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MC40-6] Length = 266 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 92/257 (35%), Gaps = 14/257 (5%) Query: 17 FTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 FT+ + +A +L +KK G L+ G+ F +G +GFDVD A++ + Sbjct: 19 FTAVAAHAEDLLDSVKKAGVLRVGLEGTYPPFNSRGTSGQLEGFDVDVANAVAGKLG--- 75 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK- 134 K Q++P LQ+ + D++ T R+ L + P TY Q Sbjct: 76 VKTQFIPTEWSGIIAGLQAGKFDVIVNQVTITPQRKEVLDFSQ-PYTYSAAQLIQRKDDT 134 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 + S+ G + V GT D + E A R +A Sbjct: 135 RNFKSLEDFKGKKLGVTLGTNY-----DQMARSVPGIEVQTYPGAPEKLRDLAAGRIEAT 189 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D L + T++ P + + + +A +G+ ++ ++ ++ L Sbjct: 190 LDDRLMLPYMIKTSNLPLRSGAVLNGGKQE-MAIPFRKGNPKFEKAINDALDSLRKDGTL 248 Query: 255 GITQKNINQVSKDTTNP 271 ++ D T P Sbjct: 249 KKIS--MHWFGSDVTVP 263 >gi|289424115|ref|ZP_06425901.1| amino acid ABC transporter, substrate-binding protein [Peptostreptococcus anaerobius 653-L] gi|289155540|gb|EFD04219.1| amino acid ABC transporter, substrate-binding protein [Peptostreptococcus anaerobius 653-L] Length = 264 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 40/265 (15%), Positives = 84/265 (31%), Gaps = 9/265 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + K V + +I + ++ K + G++ V + + GFD Sbjct: 6 LKKLMAVGLGLVIATSLVACKSSEKKADSAKSSKEIVVGLDNTFVPMGFLDEKNELVGFD 65 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + +P ++ ++ + +L++K +D L T R+ + Sbjct: 66 IDLAKEAFKRMGLEP---RFENIDWSTKEQSLENKNVDALWNGYSITEQRKEKVAF--ST 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY--FKAHNMKYHPIVFER 178 + Q + KK I + L + QAG+ + + F P ++ Sbjct: 121 PYLDNKQIVVSMKKDNIKTFKDLKDKQVGTQAGSASLDAIEANKEFTGLIKGSEPTTYDT 180 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 ++ R A GD L ++ +L + K + DT+ Sbjct: 181 FDKALRDLEIGRTKAVVGDEVLLKYYIKQ-RGADKYQVLDGDLGKEQYGVGFRKDDTKRV 239 Query: 239 NIVSWTHYAMVTAEEL-GITQKNIN 262 + M I K N Sbjct: 240 EEFNKVLKEMQEDGTFDKIKAKWFN 264 >gi|76809564|ref|YP_333374.1| amino acid ABC transporter periplasmic amino acid-binding protein [Burkholderia pseudomallei 1710b] gi|254179931|ref|ZP_04886530.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 1655] gi|254261060|ref|ZP_04952114.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 1710a] gi|254297763|ref|ZP_04965216.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 406e] gi|76579017|gb|ABA48492.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 1710b] gi|157806758|gb|EDO83928.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 406e] gi|184210471|gb|EDU07514.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 1655] gi|254219749|gb|EET09133.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 1710a] Length = 284 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 59/272 (21%), Positives = 102/272 (37%), Gaps = 19/272 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K V+ L + F + + A +L ++K+RG L+ G+ F G+ GFDVD Sbjct: 27 KKLLVTGL-IGASFAAATAHAADLLDEVKQRGTLRIGLEGTFPPFNSKNPQGELVGFDVD 85 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 +A+++ + P +++ LQ+ + D++ T R+ +L P Sbjct: 86 IAKAIAAKLGVKP---EFVTTEWSGIIAGLQAGKFDVIVNQVGITDPRKQTLDF--SPAY 140 Query: 123 YFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 F I K S+ L G + V G T + +A ++K +P Sbjct: 141 TFSSAQLIQRKDDARQFKSLEDLKGKKLGVALG-TNYMDMAKSVPGIDVKTYPGA----P 195 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E A R DA D L L P ++ S +P +G+ ++ Sbjct: 196 EYLRDLAAGRLDAALNDRLMLAYLTKNAQLP--LRPGANVGSANPSGIPFKKGNPKFAKA 253 Query: 241 VSWTHYAMVTAEELGITQKNINQVSK-DTTNP 271 ++ AM E G K ++ D T P Sbjct: 254 IAD---AMTQLEADGTFTKISDKWFGIDVTKP 282 >gi|319761572|ref|YP_004125509.1| extracellular solute-binding protein family 3 [Alicycliphilus denitrificans BC] gi|330823440|ref|YP_004386743.1| ABC transporter periplasmic subunit [Alicycliphilus denitrificans K601] gi|317116133|gb|ADU98621.1| extracellular solute-binding protein family 3 [Alicycliphilus denitrificans BC] gi|329308812|gb|AEB83227.1| ABC-type transporter, periplasmic subunit family 3 [Alicycliphilus denitrificans K601] Length = 265 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 39/270 (14%), Positives = 84/270 (31%), Gaps = 14/270 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF----LKCGINTGLVGFAEVKANGDW 56 M K V++L L + + + G++ + Sbjct: 1 MKKIAAVALLSLGAVLAGCSKQENAPAPAAAPAPAAVTQIVVGLDDNFPPMGFRDEKNEL 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFD+D + + + ++++ P++ + L K++D+L T R + Sbjct: 61 VGFDIDMAKEAAKRLG---LQVEFKPIDWSAKEAELSGKRVDVLWNGLTITEER--KQNI 115 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 AF + Q ++ I + + L+G + Q G++ + F Sbjct: 116 AFTAPYMENHQIIVVPAGSAIKAKADLAGKVVGAQEGSSAVDAIKKEDAVFKSFKEFKTF 175 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 R +A D + +P ++ +L D + + DTE Sbjct: 176 GDNVTALMDLSTGRLEAVVVD--EVVGRYYVAKKPDQYEVLDDNFGTEEYGVGLRKDDTE 233 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSK 266 + + A+ + G K Q Sbjct: 234 LHGKLD---KALADMKADGAAAKIAEQWFG 260 >gi|298369229|ref|ZP_06980547.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria sp. oral taxon 014 str. F0314] gi|298283232|gb|EFI24719.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria sp. oral taxon 014 str. F0314] Length = 271 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 52/275 (18%), Positives = 97/275 (35%), Gaps = 12/275 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ C + N + + G+N F + G+ +GFD Sbjct: 3 MKKWIIAAVACSALALGACGGQNKNSSAA-NPYKVYRVGMNAEFAPFESQTSEGNVEGFD 61 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A++ A K+++ + F +L + IDI+ T R+ S+ Sbjct: 62 VDLMNAMAKA---GNFKVEFKHQPWESLFPSLGNGDIDIVISGVTITDERKQSMDF--SD 116 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSG-ASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Q ++ K K ++S L A + V G T + +++ + N K FE V Sbjct: 117 PYFEITQVVLVPKGKKVASSDDLKNMAKVGVVTGQTGDFSVSKLLGSDNPKI--SRFETV 174 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPS-EHVILPDIISKSPLAPAIIQGDTEWY 238 I D+ D + + N + + LPD S A+ +GD Sbjct: 175 PLIIKELENGGLDSVVSDSAVIANYVKNNPTKGLDFITLPD-FSVENYGIAVRKGDEAAV 233 Query: 239 NIVSWTHYAMVTAEEL-GITQKNINQVSKDTTNPD 272 +++ + + E I K + + Sbjct: 234 KMLNDALKKVRESGEYDKIYAKYFAKEEAKAGKAE 268 >gi|325277397|ref|ZP_08143017.1| extracellular solute-binding protein [Pseudomonas sp. TJI-51] gi|324097470|gb|EGB95696.1| extracellular solute-binding protein [Pseudomonas sp. TJI-51] Length = 261 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 42/244 (17%), Positives = 90/244 (36%), Gaps = 13/244 (5%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 I RG LK + F V + +G D+D + L+ + K+ P+N+ R Sbjct: 31 ITARGVLKVAVPQDFPPFGSVGPDLKPRGLDIDTAQLLADKLG---VKLALTPVNSTNRI 87 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 L + ++D++ + RE + + ++ ++ IS + ++G +I Sbjct: 88 PFLTTGKVDLVISSLGKNAEREAVIDFSRPYAPFY--LAVFGPEQTSISDIGAIAGKTIS 145 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V G+ ++ L FE AAY + + + + + Sbjct: 146 VTRGSIEDMELTAVAPK---GAVIKRFEDNNSTIAAYLSGQVELIASGSVVMA--VIAEK 200 Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 P++ ++ + SP+ + + + V+ T A A+ G +N + K Sbjct: 201 NPAKVPVMKVKLKDSPVYVGLAKQEPALLAKVNATLDA---AKADGSLNRNAEKWLKQPL 257 Query: 270 NPDV 273 D+ Sbjct: 258 PADL 261 >gi|326315798|ref|YP_004233470.1| family 3 extracellular solute-binding protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323372634|gb|ADX44903.1| extracellular solute-binding protein family 3 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 267 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 38/261 (14%), Positives = 81/261 (31%), Gaps = 19/261 (7%) Query: 1 MYKDFFVSILCLIILFFT---------SFSTNASILGDIKKRGFLKCGINTGLVGFAEVK 51 M K ++++ L L + ST A+ + K + G++ Sbjct: 1 MKKIAAIALVSLGALLAACGKNDSAQPAASTPATPPAAVTK---IVIGLDDNFPPMGFRD 57 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 GFD+D R + + + +++ P++ + L K++D L T R Sbjct: 58 DKNQLVGFDIDMAREAAKRMGVE---VEFKPIDWSAKEAELSGKRVDALWNGLTITEER- 113 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 +AF + Q ++ I + + L+G + Q G++ + Sbjct: 114 -KQNIAFTAPYMENHQIVVVAANSPIKTKADLAGKIVGAQEGSSAVDAVKKDEAVFKSFK 172 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 F R +A D + +P ++ +L + + Sbjct: 173 EFKTFGDNVTALMDLSTGRLEAVVVD--EVVGRYYVAKKPQDYAVLDEHFGTEEYGVGVR 230 Query: 232 QGDTEWYNIVSWTHYAMVTAE 252 + DT + M Sbjct: 231 KDDTALQGRLDKALADMKQDG 251 >gi|187919125|ref|YP_001888156.1| family 3 extracellular solute-binding protein [Burkholderia phytofirmans PsJN] gi|187717563|gb|ACD18786.1| extracellular solute-binding protein family 3 [Burkholderia phytofirmans PsJN] Length = 251 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 57/270 (21%), Positives = 94/270 (34%), Gaps = 21/270 (7%) Query: 1 MYKDFFVSILCL-IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M +S+ C+ + + F FS AS + L + NG GF Sbjct: 1 MKLQRLLSLACVTVAVTFAGFSGAASA----QTPDVLNVATDATFPPMEYT-ENGARTGF 55 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD AL+ A+ K+Q+ ++ K L + + D T R + Sbjct: 56 DVDLMNALAKAMGK---KVQWTDIDFKGLIPGLIAHRFDAAISGIYITDERAKVVDFTDS 112 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G ++ I SV +L+G + VQ GT + L D F N + E+ Sbjct: 113 --YYAGGLVVLVKSNSPIKSVEELNGKKVSVQVGTKSVNFLRDNFPQINR----VEVEKN 166 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E+ R DA A Y L T +L ++ A+ + + + Sbjct: 167 QEMFDLVGIGRADAAVTGKPAAYQLVKTR---GGFRVLDKPLTTEAYGIAVRKDEPQLKA 223 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTT 269 + T A + A G + + T Sbjct: 224 AFN-TALAKIKA--DGTYAAIVKKWFGATA 250 >gi|313902716|ref|ZP_07836114.1| extracellular solute-binding protein family 3 [Thermaerobacter subterraneus DSM 13965] gi|313467013|gb|EFR62529.1| extracellular solute-binding protein family 3 [Thermaerobacter subterraneus DSM 13965] Length = 293 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 48/250 (19%), Positives = 94/250 (37%), Gaps = 20/250 (8%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANG--DWKGFDVDFCRALSSAIFDDPSKI 78 S S+L +IK+RG++ + + GFD+D +A++ + + + Sbjct: 58 SGEKSLLDEIKERGYMTFATDGAYPPMEFPDPENPSELIGFDIDLGKAIAEKLGVEHRAV 117 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KG 136 ++ L+S + D++ + + T R+ S + GQ ++ K KG Sbjct: 118 ---VVDWDGILAGLESGRYDVVMSSMNITEERQKSADFVQ---YFEMGQMIVVAKGNPKG 171 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 I S+ L G I VQ GTT E A F+ + R DA Sbjct: 172 IHSLDDLKGKVIAVQIGTTNEEIARGIEGA-----TVKTFQTFPDALKEVHVGRADATIL 226 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 D A N ++ + + ++P+ A+ +G+ ++V A+ ++ G Sbjct: 227 DEPV--ARYYANIEGDKYEFVGEPFERAPVGIAVAKGNE---DLVQAIQKALDELKQDGT 281 Query: 257 TQKNINQVSK 266 + + Sbjct: 282 YDQIYAKWFG 291 >gi|310640485|ref|YP_003945243.1| amino acid abc transporter [Paenibacillus polymyxa SC2] gi|309245435|gb|ADO55002.1| Amino acid ABC transporter [Paenibacillus polymyxa SC2] Length = 255 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 44/286 (15%), Positives = 102/286 (35%), Gaps = 33/286 (11%) Query: 1 MYKD-FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K F ++ LI++ S K L GI+ N + GF Sbjct: 1 MRKAAMFTMMIGLIMIVLAGCSGG-------KDNSKLIIGIDDKFAPMGFRDENNELTGF 53 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D+ +A + ++++ P++ + L S +ID++ T R+ + Sbjct: 54 DIDYAKAAGEQMGK---QVEFQPIDWSAKESELNSGRIDLIWNGYTITDERKEKVLF--T 108 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Q ++ +S ++ L+G ++ +Q ++ L D + + Sbjct: 109 KPYLKNSQVIVVPATSSLSKLADLAGKTVGLQTLSSAADAL-DANPIKSKLKSVSEYPDN 167 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R DA D + A + + +L + ++ + +G+ E Sbjct: 168 VLALTDLKTGRLDAVVID--EVVAKYYMSKEQGTYKLLDESLAPEEYGIGVKKGNEELLT 225 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV-QRFLGIDKSSN 284 + Q ++++ K+ ++ +++ G DK N Sbjct: 226 QL----------------QSALDELHKNGKAAEISKKWFGEDKVLN 255 >gi|24379607|ref|NP_721562.1| putative ABC transporter, glutamine binding protein [Streptococcus mutans UA159] gi|290580393|ref|YP_003484785.1| putative ABC transporter glutamine binding protein [Streptococcus mutans NN2025] gi|24377556|gb|AAN58868.1|AE014954_7 putative ABC transporter, glutamine binding protein [Streptococcus mutans UA159] gi|254997292|dbj|BAH87893.1| putative ABC transporter glutamine binding protein [Streptococcus mutans NN2025] Length = 277 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 40/281 (14%), Positives = 93/281 (33%), Gaps = 14/281 (4%) Query: 2 YKDFFVSILCLIILFFTS----FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 K I L ++ T+ + + + + + G + V NG Sbjct: 4 KKAVTALITFLAVVTLTACGKKGADSQDNWKKFESKKSVTIGFDNTFVPMGFKDKNGKNV 63 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D A+ + K+++ P+N + L++ +ID++ T RE + ++ Sbjct: 64 GFDIDLANAVFNEYG---IKVKWQPINWDLKETELKNGKIDLIWNGYSKT--RERARKVS 118 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI--- 174 F + Q + K GI+S + + G ++ Q+G++ K Sbjct: 119 FTKPYMKNDQVLVTKKSSGITSFADMKGKALGAQSGSSGYDAFTANPKILKDIVKDNDAS 178 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +E + + R + D + I+ + + + + D Sbjct: 179 QYETFTQAFIDLKNDRINGLLIDRVYANYYLKQEKELDNYNIIKGKYASEDFSVGVRKSD 238 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 V+ + + + +D + ++R Sbjct: 239 KTLKKKVNQAFKKLYKNGKFQAISQ--KWFGQDVASNAIKR 277 >gi|310640332|ref|YP_003945090.1| cystine abc transporter [Paenibacillus polymyxa SC2] gi|309245282|gb|ADO54849.1| Cystine ABC transporter [Paenibacillus polymyxa SC2] Length = 285 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 57/288 (19%), Positives = 100/288 (34%), Gaps = 33/288 (11%) Query: 2 YKDFFVSILCLIILFF--------------------TSFSTNASILGDIKKRGFLKCGIN 41 K F V+ L + LF +S A+ L IKK +K G+ Sbjct: 5 KKGFLVTTLMALALFSLVLSACGTKPEASNTSNGAGSSNEAAANQLEAIKKADVMKVGMM 64 Query: 42 TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101 + + N + GFDVD + L+ I K ++ +LQ K+ D + Sbjct: 65 GTYPPYNFLNDNKELDGFDVDIAKELAKRIG---VKAEFTAQEFSGLIPSLQKKKFDAVV 121 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTL 160 T R+ ++ + I++ K I+++ G +I V GT E L Sbjct: 122 SQVAITEDRKKAIDF--TDPYITNNVNIIVNSKTNDITTLEDFKGKTIGVGLGTNDESYL 179 Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK-LTNDRPSEHVILPD 219 + + ++ V + R DA + LYALK + + + + + Sbjct: 180 RNEVLPKVGDFEIKTYDDVITSLKDLNSGRIDATINN---LYALKPIIDKNGFQIKAVGE 236 Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 I A AI Q E ++ M +E G + + + Sbjct: 237 PIKSDQAAVAINQKTPELKAALNKALKEM---KEDGTYKTIFKKWFGE 281 >gi|303231763|ref|ZP_07318485.1| putative glutamine ABC transporter, periplasmic glutamine-binding protein GlnH [Veillonella atypica ACS-049-V-Sch6] gi|302513554|gb|EFL55574.1| putative glutamine ABC transporter, periplasmic glutamine-binding protein GlnH [Veillonella atypica ACS-049-V-Sch6] Length = 260 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 56/273 (20%), Positives = 107/273 (39%), Gaps = 23/273 (8%) Query: 1 MYK-DFFVSILCLIILFFTSFSTNASILGDI-KKRGFLKCGINTGLVGFAEVKANGDWKG 58 M+K +I + + + S + ++ G L+ G T F + + + G Sbjct: 1 MFKFKKLTAIALVAVAAMGLLAGCGSEKSKMTQEAGVLRVGSETTFPPFEFTEGD-KYVG 59 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD A++ + K+++ + A+QS ID+++ + T RE +L + Sbjct: 60 FDVDLSEAIAKKLG---LKMEFKSMGFDALIPAVQSGDIDMIAAGINSTPEREKALDFSD 116 Query: 119 RPITYFDGQGFIM---HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 YFD GFI I ++ +L+G ++ VQ GT Sbjct: 117 V---YFDQGGFITVVRKDNTSIHNMDELAGKTVGVQIGTVPVD-----MAKAIPNTTVKE 168 Query: 176 FERVEEIDAAYRAHRCDAYTGDIS-ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + I +A D D + A+Y LK D+ + ++ + + + +G+ Sbjct: 169 MDSNANIFMELKAGTIDGAIIDNAVAMYYLKQGADK--DLKLVGEPTKAPGIVLGVKKGN 226 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 E + V+ A+ +E G QK ++ D Sbjct: 227 KELQDAVN---KALKELKEDGTYQKIYDKWFGD 256 >gi|206558740|ref|YP_002229500.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315] gi|198034777|emb|CAR50644.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315] Length = 266 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 47/244 (19%), Positives = 88/244 (36%), Gaps = 12/244 (4%) Query: 17 FTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 FT+ + +A +L +KK G L+ G+ F +G +GFDVD A++ + Sbjct: 19 FTAVAAHAEDLLDSVKKAGVLRVGLEGTYPPFNSRGTSGQLEGFDVDVANAVAGKLG--- 75 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK- 134 K Q++P LQ+ + D++ T R+ +L + P TY Q Sbjct: 76 VKTQFIPTEWSGIIAGLQAGKFDVIVNQVTITPQRKEALDFSE-PYTYSAAQLIQRKDDT 134 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 + S+ G + V GT D + E A R +A Sbjct: 135 RNFKSLDDFKGKKLGVTLGTNY-----DQMARTVPGIEVQTYPGAPEKLRDLAAGRIEAT 189 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D L + T++ P + + + +A +G+ ++ ++ ++ L Sbjct: 190 LDDRLMLPYMIKTSNLPLRAGAVLNGGKQE-MAIPFRKGNPKFEKAINDALESLRKDGTL 248 Query: 255 GITQ 258 Sbjct: 249 KKIS 252 >gi|15890452|ref|NP_356124.1| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|15158682|gb|AAK88909.1| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 278 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 41/248 (16%), Positives = 93/248 (37%), Gaps = 12/248 (4%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 T +A L + K G + GI + + ++G +G+D D R + + Sbjct: 25 LTPAGADARTLEEAKSSGKIVIGIQGDNAPWGFINSSGVQEGYDADLARGFADYLG---L 81 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 K++++PL R +L++ ++D L + T R ++ A + K K Sbjct: 82 KVEFVPLAVANRIPSLRTGKVDALFASMGMTPERAKNVQYAQ--PYAHNVMSVYATKDKK 139 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 I++ L+G ++ + + L K + + F+ A + + +A G Sbjct: 140 IANFDDLTGMTVGAPKSSPMDTALTA---GAGTKANILRFDDDAATIQAILSGQIEAIGG 196 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS-WTHYAMVTAEELG 255 + Y +L ++ + + + A G+ +W ++ W A + Sbjct: 197 N--QFYGDRLAAAGGKDYEV-KFDLVTLYNSAATRPGEKDWNEALNAWLDKAKANGDLAK 253 Query: 256 ITQKNINQ 263 + K + + Sbjct: 254 VYAKWMKR 261 >gi|256847976|ref|ZP_05553420.1| glutamine ABC transporter substrate binding component [Lactobacillus coleohominis 101-4-CHN] gi|256715036|gb|EEU30013.1| glutamine ABC transporter substrate binding component [Lactobacillus coleohominis 101-4-CHN] Length = 281 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 50/260 (19%), Positives = 96/260 (36%), Gaps = 15/260 (5%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 T + + I++R + G++ V + NG G+DVD RA+ Sbjct: 25 SVTKRANHQDTWSRIERRHKVIIGVDDSFVPMGFRQKNGKLVGYDVDLARAVFKQYG--- 81 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 K + ++ + L++ ID+L T R+ + + + + Q + K Sbjct: 82 IKADFQTIDWSMKETELKNGTIDLLWNGYSVTPQRQKKVAFSR--VYLLNKQILVTKKSD 139 Query: 136 GISSVSQLSGASICVQAGTTTELTLADY---FKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 I++ +++G ++ VQ G+T L +Y K + P++++ A+R Sbjct: 140 HINNFQEMTGKTLGVQNGSTGMTMLDEYPRLLKDRIKDHKPVLYDTFPNAFIDLNANRIQ 199 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSP---LAPAIIQGDTEWYNIVSWTHYAMV 249 D +YA +P + SK P A + +GD V+ + Sbjct: 200 GILMD--EVYADYYIQHQPDRNAYATYSSSKMPADKFAVGMRKGDRTLRQKVNQGLGRLQ 257 Query: 250 TAEELGITQKNINQVSKDTT 269 EL N KD+ Sbjct: 258 KNGELRKI--NEKWFGKDSN 275 >gi|229113500|ref|ZP_04242949.1| Amino acid ABC transporter, amino acid-binding protein [Bacillus cereus Rock1-15] gi|229164679|ref|ZP_04292543.1| Amino acid ABC transporter, amino acid-binding protein [Bacillus cereus R309803] gi|228618759|gb|EEK75721.1| Amino acid ABC transporter, amino acid-binding protein [Bacillus cereus R309803] gi|228669918|gb|EEL25312.1| Amino acid ABC transporter, amino acid-binding protein [Bacillus cereus Rock1-15] Length = 262 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 39/249 (15%), Positives = 90/249 (36%), Gaps = 25/249 (10%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K+ L GI+ + GFD+D+ +A + + +K+++ P++ K + Sbjct: 32 KEDNTLVIGIDDKFAPMGFRDESNKIVGFDIDYAKAAAEKMG---TKVKFQPIDWKTKES 88 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150 L S +ID++ T R+ + + Q + I+ ++ L G + + Sbjct: 89 ELSSGRIDLIWNGYTITDDRKNKVLF--TKPYLKNAQVVVTLADSPITKLNNLEGKVVGL 146 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 Q+ ++ L +K F ++ R DA D + Sbjct: 147 QSLSSASDALNSNPIKSKIK-TVTEFADNVSALNDLKSGRLDAVIIDEVVINYYMTKEK- 204 Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 IL + +S + +G+ + QK ++++++D T Sbjct: 205 -DTFKILDEFLSPEEYGIGVKKGNDALLKKL----------------QKALDEMNEDGTA 247 Query: 271 PDV-QRFLG 278 ++ +++ G Sbjct: 248 TEISKKWFG 256 >gi|94987196|ref|YP_595129.1| amino acid ABC transporter periplasmic protein [Lawsonia intracellularis PHE/MN1-00] gi|94731445|emb|CAJ54808.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Lawsonia intracellularis PHE/MN1-00] Length = 249 Score = 136 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 49/267 (18%), Positives = 90/267 (33%), Gaps = 23/267 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M FV IL L F NA +G L +T L+ F G++ GFD Sbjct: 1 MKYKIFVFILGLFFTNTFGFFANA--------KG-LVVAHDTNLMPFEFKDKEGNFVGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ ++ + P++ LQ+ IDI T R + + Sbjct: 52 IELWEHIAEIANIP---YTFQPMDFNGIIPGLQTGSIDIAISGMTITPERAKVILFSQ-- 106 Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G ++ + IS + L G ++ V+ GT++ D+ K+ + +F Sbjct: 107 PYYESGLMILVRAGEESISKLEDLVGKTVGVKTGTSSV----DFMKSFGKQRSLKLFPTN 162 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + + DA D L + + + ++ P A + E Sbjct: 163 DGMFFDLMTGGVDAVVFDAPVLQYFASSAGK-GKVKLVGPKYKGQPYGIAFRKNSEEL-- 219 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSK 266 V + A+ + GI + + Sbjct: 220 -VQKVNTALNELKRNGIYTELYKKWFG 245 >gi|44004546|ref|NP_982215.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus ATCC 10987] gi|190015020|ref|YP_001966755.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus] gi|190015286|ref|YP_001967079.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus] gi|218848398|ref|YP_002455141.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus AH820] gi|296506619|ref|YP_003667853.1| amino acid ABC transporter amino acid-binding protein [Bacillus thuringiensis BMB171] gi|42741612|gb|AAS45057.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus ATCC 10987] gi|116584696|gb|ABK00811.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus] gi|116584967|gb|ABK01076.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus] gi|218540449|gb|ACK92845.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus AH820] gi|296327206|gb|ADH10133.1| Amino acid ABC transporter, amino acid-binding protein [Bacillus thuringiensis BMB171] Length = 257 Score = 136 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 39/249 (15%), Positives = 90/249 (36%), Gaps = 25/249 (10%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K+ L GI+ + GFD+D+ +A + + +K+++ P++ K + Sbjct: 27 KEDNTLVIGIDDKFAPMGFRDESNKIVGFDIDYAKAAAEKMG---TKVKFQPIDWKTKES 83 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150 L S +ID++ T R+ + + Q + I+ ++ L G + + Sbjct: 84 ELSSGRIDLIWNGYTITDDRKNKVLF--TKPYLKNAQVVVTLADSPITKLNNLEGKVVGL 141 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 Q+ ++ L +K F ++ R DA D + Sbjct: 142 QSLSSASDALNSNPIKSKIK-TVTEFADNVSALNDLKSGRLDAVIIDEVVINYYMTKEK- 199 Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 IL + +S + +G+ + QK ++++++D T Sbjct: 200 -DTFKILDEFLSPEEYGIGVKKGNDALLKKL----------------QKALDEMNEDGTA 242 Query: 271 PDV-QRFLG 278 ++ +++ G Sbjct: 243 TEISKKWFG 251 >gi|227549084|ref|ZP_03979133.1| glutamate-binding protein GluB [Corynebacterium lipophiloflavum DSM 44291] gi|227078866|gb|EEI16829.1| glutamate-binding protein GluB [Corynebacterium lipophiloflavum DSM 44291] Length = 290 Score = 136 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 47/247 (19%), Positives = 86/247 (34%), Gaps = 22/247 (8%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS----KIQYLP 82 L I + G + G G +A+G G DVD + ++I +D +I + Sbjct: 36 LAQI-ESGNVTLGTKYDQPGLGLREADGSMTGLDVDVLTYVVNSIAEDKGWAEPEITWRE 94 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVS 141 + +R +Q+ ++ + R ++ A QG ++ K I+ + Sbjct: 95 TPSAQRETLIQNGEVAAIGATYSINASRAEAVSFA--GPYLLTHQGLLVRADEKDITGLE 152 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L G +C G+T + D ++ A R DA T D S L Sbjct: 153 GLDGRILCSVTGSTPAQKVKDALP----GVQLQEYDTYSSCVEALRNGNVDAMTTDASIL 208 Query: 202 YALKLTNDRPSEHVIL-----PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 + P + I+ + + + DTE + V+ AM G Sbjct: 209 GGYSAQS--PGDFAIVELEKDGQPFTNEHYGIGVTKDDTEAVDAVNKALEAMYA---DGS 263 Query: 257 TQKNINQ 263 QK +++ Sbjct: 264 FQKFVDE 270 >gi|126657487|ref|ZP_01728643.1| binding protein of ABC transporter component [Cyanothece sp. CCY0110] gi|126621191|gb|EAZ91904.1| binding protein of ABC transporter component [Cyanothece sp. CCY0110] Length = 297 Score = 136 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 46/257 (17%), Positives = 91/257 (35%), Gaps = 13/257 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 MYK + L LI F + A + + + G L LV +A V + G+ Sbjct: 1 MYKKLPLITLSLITAFILPSRSLAETVIERVARTGILNVSTKVDLVPYAYVNDEDELVGY 60 Query: 60 DVDFCRAL----SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 V+ + + I D + ER +L ++++DI T +T R+ + Sbjct: 61 SVELIELIRETLAKEIGKDVQIKVIVDDTLDERISSLLNREVDIACD-TTFTWQRDRFVD 119 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + G + + +SS I + + + K + + Sbjct: 120 FSLA--YGISGIKVFVRENSNLSSRESFKNKRIAIIESVLS----PESIKVIESQVTIVN 173 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAIIQGD 234 + +E A D + D + L + T P + ++PD +A + + D Sbjct: 174 VDSIEAGIKAVEDGEVDGFAFDGTILEGTRQTLTNPDAYKVVPDESYFKHGIACMVPEQD 233 Query: 235 TEWYNIVSWTHYAMVTA 251 + + N+V+ T M+ Sbjct: 234 STFLNLVNLTIGKMMDG 250 >gi|313668015|ref|YP_004048299.1| histidine-binding periplasmic protein [Neisseria lactamica ST-640] gi|313005477|emb|CBN86912.1| histidine-binding periplasmic protein [Neisseria lactamica 020-06] Length = 268 Score = 136 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 49/274 (17%), Positives = 91/274 (33%), Gaps = 12/274 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFL-KCGINTGLVGFAEVKANGDWKGF 59 M K ++ C ++ + + N F + + G+ +GF Sbjct: 3 MKKWIAAALACSVLALSACGGQGKDAAAPAANPDKVYRVASNAEFAPFESLDSKGNVEGF 62 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD A++ A KI++ F AL + D++ T R+ S+ Sbjct: 63 DVDLMNAMAKA---GNFKIEFKHQPWDSLFPALNNGDADVVMSGVTITDDRKQSMDF--S 117 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + Q ++ K K +SS L + V G T + +++ N FE Sbjct: 118 DPYFEITQVVLVPKGKKVSSSEDLKKMNKVGVVTGYTGDFSVSKLLG--NDNPKIARFEN 175 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS-EHVILPDIISKSPLAPAIIQGDTEW 237 V I D+ D + + N + V LPD + A+ +GD Sbjct: 176 VPLIIKELENGGLDSVVSDSAVIANYVKNNPAKGMDFVTLPD-FTTEHYGIAVRKGDEAT 234 Query: 238 YNIVSWTHYAMVTAEEL-GITQKNINQVSKDTTN 270 +++ + + E I K + + Sbjct: 235 VKMLNDALKKVRESGEYDKIYAKYFAKEGEQAAK 268 >gi|107024193|ref|YP_622520.1| extracellular solute-binding protein [Burkholderia cenocepacia AU 1054] gi|116688482|ref|YP_834105.1| extracellular solute-binding protein [Burkholderia cenocepacia HI2424] gi|105894382|gb|ABF77547.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia AU 1054] gi|116646571|gb|ABK07212.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia HI2424] Length = 266 Score = 136 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 47/244 (19%), Positives = 88/244 (36%), Gaps = 12/244 (4%) Query: 17 FTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 FT+ + +A +L +KK G L+ G+ F +G +GFDVD A++ + Sbjct: 19 FTAVAAHADDLLDSVKKAGVLRVGLEGTYPPFNSRGTSGQLEGFDVDVANAVAGKLG--- 75 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK- 134 K Q++P LQ+ + D++ T R+ +L + P TY Q Sbjct: 76 VKTQFIPTEWSGIIAGLQAGKFDVIVNQVTITPQRKEALDFSE-PYTYSAAQLIQRKDDT 134 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 + S+ G + V GT D + E A R +A Sbjct: 135 RNFKSLDDFKGKKLGVTLGTNY-----DQMARTVPGIEVQTYPGAPEKLRDLAAGRIEAT 189 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D L + T++ P + + + +A +G+ ++ ++ ++ L Sbjct: 190 LDDRLMLPYMIKTSNLPLRAGAVLNGGKQE-MAIPFRKGNPKFEKAINDALESLRKDGTL 248 Query: 255 GITQ 258 Sbjct: 249 KKIS 252 >gi|319441564|ref|ZP_07990720.1| glutamate ABC transport system, solute-binding protein [Corynebacterium variabile DSM 44702] Length = 288 Score = 136 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 44/270 (16%), Positives = 91/270 (33%), Gaps = 23/270 (8%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 L + S+L DI + G + G G E + D+ G D D R + + I D Sbjct: 14 LASCGSTEPRSLLDDI-ENGHVTLGTKFDQPGLGERTPDKDFVGLDTDVSRYVVNYIADK 72 Query: 75 PS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130 I + + +R + + ++++++ R ++ Q + Sbjct: 73 NGWNEPDITWRETPSAQRETLINNGEVNMIAATYSINAGRYKAVDF--GGPYLVTHQALL 130 Query: 131 MHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 + GISS+ + G +C +G+T + + K F+ + Sbjct: 131 VRGDAGISSLQDIADGTRLCSVSGSTPAQKVKEALP----KVQLQEFDTYAACAEGVKQG 186 Query: 190 RCDAYTGDISALYAL--KLTNDRPSEHVIL------PDIISKSPLAPAIIQGDTEWYNIV 241 DA T D + L + + ++ + + +GD + V Sbjct: 187 VVDALTTDATILAGFAERYKERYGDDFKVVELKNEDGSYWTDENYGIGLPKGDGADRDAV 246 Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + M E G +K I++ + +P Sbjct: 247 NEALTEMW---ESGEFRKIIDEYLGEDFDP 273 >gi|78355233|ref|YP_386682.1| extracellular solute-binding protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78217638|gb|ABB36987.1| amino acid ABC transporter substrate-binding protein, PAAT family [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 251 Score = 136 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 48/246 (19%), Positives = 85/246 (34%), Gaps = 21/246 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + F + L + + + A L GI+ FA V +G GFD Sbjct: 1 MLRKFTIMAAVLALSLAFAGTAFAGK--------TLINGIDANYPPFAYVDKDGKPAGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +++ + +++ P+ +L SK+ID++ T R + Sbjct: 53 VDAMEWIAAKMGFT---VKHKPMEWSTIVQSLVSKKIDMVCSGMSITEERARQVSF--SD 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTL-ADYFKAHNMKYHPIVFE 177 + Q FI K G++ V Q+ G + VQ+GT+ L + Y ++ Sbjct: 108 PYWTVAQVFIAKKGSGLT-VEQVFTGGKKLGVQSGTSEADWLDKEKPNKPEWNYTVRFYD 166 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 R DA D A +P E ++ A+ + D E Sbjct: 167 SAPLAIEDVINGRIDAAAMD--IAPAQDAQRVKPIE--VVGSFTDPEYFGIAVRKEDKEL 222 Query: 238 YNIVSW 243 ++ Sbjct: 223 LETINK 228 >gi|229829988|ref|ZP_04456057.1| hypothetical protein GCWU000342_02094 [Shuttleworthia satelles DSM 14600] gi|229791286|gb|EEP27400.1| hypothetical protein GCWU000342_02094 [Shuttleworthia satelles DSM 14600] Length = 294 Score = 136 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 52/282 (18%), Positives = 101/282 (35%), Gaps = 29/282 (10%) Query: 1 MYKDFFVSILCLIILFFTSFST------NASILG------------DIKKRGF-LKCGIN 41 M K ++ ++ L T+ T NA+ D+K L G + Sbjct: 4 MKKIMAFGLIAVMALAVTACGTKSGDQKNANSGDGSKAESKTAKKGDVKNTDQNLIVGFD 63 Query: 42 TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101 F + +NG++ GFD++ + ++ + + P++ + + + L + ID + Sbjct: 64 QNFPPFGYLDSNGNFTGFDLELAQEAANRMKVELV---LQPIDWETKDMELSAGTIDCIW 120 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 RE + + + Q F++ K GI L+G + VQ ++ E L Sbjct: 121 NGFSVN-GREKNYTFSDS--YMNNAQVFVVRKNSGIEDEQGLAGKVVDVQKESSAETALN 177 Query: 162 DYFKA--HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219 + N + DA D AL ++P + IL + Sbjct: 178 SKEEETLKNSFAQLNQVADYNTAMMDLESGAVDAVAMDK--FVALDQMKNKPDKFQILNE 235 Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 IS A A ++G+T+ + V+ + M T + Sbjct: 236 QISSEQYAVAFLKGNTQLRDQVNSVLHEMDTDGTFAKISQKY 277 >gi|91787395|ref|YP_548347.1| extracellular solute-binding protein [Polaromonas sp. JS666] gi|91696620|gb|ABE43449.1| amino acid ABC transporter substrate-binding protein, PAAT family [Polaromonas sp. JS666] Length = 265 Score = 136 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 45/264 (17%), Positives = 91/264 (34%), Gaps = 16/264 (6%) Query: 1 MYKDFFVSILCL----IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M ++ L ++ + L I + + G+ + + + ++ Sbjct: 1 MKLKALSTLAGLFASTVLTLVSPAHAADDSLTSIMAKKSIALGVASDFPPYGFMGSDFKL 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G DV + ++ + K +++P++ R LQ+K+ID++ RE + Sbjct: 61 TGVDVATAQLIADKLG---VKAEFVPVSTPNRIPYLQTKKIDLIVSALGKNAEREKVIDF 117 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 +F Q K I S L+G +I V GT + L + F Sbjct: 118 TVAYAPFF--QAVFGPKALSIKSFGDLAGKTIAVTRGTIQDDVLQQVAP---PTLKIMRF 172 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDT 235 E AA+ + + + A N + +E+ +L + SP + +G+T Sbjct: 173 EDDATTVAAFISQQTQLLATGAAVAAAAVQKNPQVQAEYKLL---LKDSPNFIGVRKGET 229 Query: 236 EWYNIVSWTHYAMVTAEELGITQK 259 V+ A L + Sbjct: 230 ALLTKVNDILRAAKADGTLEQYSQ 253 >gi|210630037|ref|ZP_03296222.1| hypothetical protein COLSTE_00106 [Collinsella stercoris DSM 13279] gi|210160714|gb|EEA91685.1| hypothetical protein COLSTE_00106 [Collinsella stercoris DSM 13279] Length = 306 Score = 136 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 41/244 (16%), Positives = 81/244 (33%), Gaps = 9/244 (3%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 G L G + + V +G++ GFD+D RA++ +++ ++ + Sbjct: 71 ATGKLIVGFDQSYPPYGYVGDDGEYTGFDLDLARAVAEE---QGWELELEAIDWDAKDAM 127 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151 L+S I+ + F + Q ++ GI L+G ++ Q Sbjct: 128 LKSGAINCIWNGFTM---DNREDDYTFSDPYMLNAQVVVVRADSGIEDAEGLAGKTVVTQ 184 Query: 152 AGTTTELTLADYFKAHNMKY-HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + E L + + + DA D+S A+ + Sbjct: 185 VDSAAEAVLKEDAADLAATFASLETIGDYNTAFMQLESGAVDAVACDLSI--AMYQMTAK 242 Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 P +V+L D +S+ A +GDT V+ T A+ + N Sbjct: 243 PDAYVMLDDYLSEENYAVGFKKGDTATAKKVTETLKALYEDGTVDEIAAKYADQGLTMDN 302 Query: 271 PDVQ 274 ++ Sbjct: 303 WQIK 306 >gi|313496590|gb|ADR57956.1| Cystine transporter subunit [Pseudomonas putida BIRD-1] Length = 264 Score = 136 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 48/244 (19%), Positives = 85/244 (34%), Gaps = 14/244 (5%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + L I+++G + G+ F+ NG GF+V+ L+ + K + Sbjct: 25 AFAGEQLKTIQEKGVINVGLEGTYPPFSFQDENGKLTGFEVELSELLAKELG---VKAKI 81 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK---GI 137 P AL+SK++D++ + R+ + P T Q I+ KK I Sbjct: 82 QPTKWDGILAALESKRLDVVVNQVTISEERKKKYDFSE-PYTVSGIQALILKKKAEQLNI 140 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 L+G + V GT E + + +E A R R DA D Sbjct: 141 KGAQDLAGKKVGVGLGTNYEQWVKKDVPQAD----VRTYEDDPSKFADLRNGRIDAILID 196 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 L AL+ + + D S+ A+ +G+ E ++ + L Sbjct: 197 R--LAALEYAQKA-KDTQLAGDAFSRLESGVAMRKGEPELLAAINKAIDKLKADGTLAKL 253 Query: 258 QKNI 261 + Sbjct: 254 SEKY 257 >gi|301630315|ref|XP_002944267.1| PREDICTED: glutamate/aspartate periplasmic-binding protein-like [Xenopus (Silurana) tropicalis] Length = 252 Score = 136 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 38/252 (15%), Positives = 73/252 (28%), Gaps = 59/252 (23%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD-----DPSKIQ 79 L IK G + G+ G NG + GF + + S I D +I+ Sbjct: 24 DTLAKIKSSGVVTLGVRESS-GLGYTLGNGKYVGFHTEMGVRILSDILTTQLDMDKLEIK 82 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 Y P+ ++ R + + +D+ +T R Sbjct: 83 YQPVTSQNRIPLVANGTVDLECGSTXNNTAR------------------------SPHKR 118 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L + ++ + + R DA+ D S Sbjct: 119 ADGL--------------------------TFKEVMGKDHADSFLMLETGRADAFIMDGS 152 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L A + P+ I+ +++S P+A + + D + V + + G K Sbjct: 153 ILAANISKSKNPANFKIVGEVLSIEPIACILRKDDPAFKKAVDDSIKHQIA---DGSLAK 209 Query: 260 NINQVSKDTTNP 271 ++ P Sbjct: 210 LYDKWFLKPIPP 221 >gi|148642867|ref|YP_001273380.1| polar amino acid ABC transporter, substrate-binding component [Methanobrevibacter smithii ATCC 35061] gi|148551884|gb|ABQ87012.1| polar amino acid ABC transporter, substrate-binding component [Methanobrevibacter smithii ATCC 35061] Length = 273 Score = 136 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 46/246 (18%), Positives = 85/246 (34%), Gaps = 14/246 (5%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 + L G + + NG++ GFD+D + + K P++ + Sbjct: 35 VNDDKTLVVGFDAEFPPYGYKDDNGEYVGFDLDVAQEVCDRNNWTLVK---QPIDWDAKD 91 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 L S ID + + + + Q ++ GI S+S L G ++ Sbjct: 92 SELNSGSIDCIWNGFTMN---GREDQYTWSDPYFDNKQVIVVKNGSGIDSLSDLKGKNVE 148 Query: 150 VQAGTTTELTLADYFKAHNMKY-HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 Q ++ L KA + + + + CDA DI + + Sbjct: 149 TQKDSSALAALQGDQKALADTFGNLVEVADYNTAFMDLESGACDAIAVDIGVAHYQINSK 208 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 D + VIL D IS A G+TE + V T M I++++ Sbjct: 209 DNDGDFVILNDNISSEQYAIGFKNGNTELRDQVQSTLDEMFKDG-------TIDKIADKY 261 Query: 269 TNPDVQ 274 ++ D++ Sbjct: 262 SDYDIK 267 >gi|288561033|ref|YP_003424519.1| amino acid ABC transporter substrate-binding protein [Methanobrevibacter ruminantium M1] gi|288543743|gb|ADC47627.1| amino acid ABC transporter substrate-binding protein [Methanobrevibacter ruminantium M1] Length = 274 Score = 136 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 38/270 (14%), Positives = 82/270 (30%), Gaps = 15/270 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILG-------DIKKRGFLKCGINTGLVGFAEVKAN 53 M K + + ++ F +++A L G + + N Sbjct: 1 MKKKIAIILGIALLAFLVIGASSAGFLDFLGGDGTATNDDNTFIVGFDAEFPPYGYKDDN 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G++ GFD+D + + K P++ + L S ID + Sbjct: 61 GEYVGFDLDLAQEVCDRNNWTLVK---QPIDWDAKDSELDSGSIDCIWNGFTIN---GRE 114 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH- 172 + + Q ++ GI+S++ L G + Q ++ L K + Sbjct: 115 DDYTWSEPYIDNKQVVVVKTDSGINSLADLDGKIVETQKDSSALAALEGDNKTLADTFKD 174 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 CDA D + +++ ++ +L + IS + Sbjct: 175 LTQVADYNTAFMDLETGACDAVAID-IGVAQYQISQKGSDQYKMLDEEISSEQYGIGFKK 233 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 G+ + + V T M + + + Sbjct: 234 GNDQLKDQVQKTLDEMFEDGTVEKLAQKYD 263 >gi|296119960|ref|ZP_06838514.1| glutamate-binding protein [Corynebacterium ammoniagenes DSM 20306] gi|295967114|gb|EFG80385.1| glutamate-binding protein [Corynebacterium ammoniagenes DSM 20306] Length = 288 Score = 136 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 49/272 (18%), Positives = 91/272 (33%), Gaps = 23/272 (8%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 + IL L + ++ S +L I + G + G+ G + +G + G +V+ Sbjct: 13 MVILGLSLSACSTSSGEQGLLDTI-ESGNITIGVKFDQPGIGLREGDGSFTGAEVEIANH 71 Query: 67 LSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + I + P I+Y A +R L++ ++ ++ T R + A Sbjct: 72 VVETIAAENGWTPPNIEYRETPAAQRETLLRNGEVSLIQGGYSITPDRMEEVDFA--GPV 129 Query: 123 YFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Q ++ I S+ L G +C AG+ + + A ++ Sbjct: 130 LLTHQALLVRSDDSAIESLDDLDGKILCSSAGSKPAQRIKEEIPA----VQLQEYDTTSS 185 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP------DIISKSPLAPAIIQGDT 235 A DA T D L D E +L S + +GDT Sbjct: 186 CIEALSQGNVDAMTSDAPILAGFAGQYD--GEFEVLDMTKSDGSHFSNEWYGIGLQKGDT 243 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 V+ M + +L + +N+ D Sbjct: 244 AGVEAVNNVLTEMQDSGQLD---EILNEYFGD 272 >gi|58337930|ref|YP_194515.1| amino acid ABC transporter [Lactobacillus acidophilus NCFM] gi|227902903|ref|ZP_04020708.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus acidophilus ATCC 4796] gi|58255247|gb|AAV43484.1| amino acid ABC transporter [Lactobacillus acidophilus NCFM] gi|227869319|gb|EEJ76740.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus acidophilus ATCC 4796] Length = 272 Score = 136 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 48/278 (17%), Positives = 97/278 (34%), Gaps = 19/278 (6%) Query: 1 MYKDFFVSILCLIILFFTSF------STNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M K + +L ++L T + + I ++ + G++ V K NG Sbjct: 1 MKKKWIFVLLATLMLVLTGCESVQKRANTQNTWNKIAQKKQVVIGLDDSFVPMGFEKKNG 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G+DVD + + + + ++ L++ ID+L T RE + Sbjct: 61 QLTGYDVDLAKEVFKLYG---INVSFQTIDWSMNVTELRNGTIDLLWNGYSITKQREKKV 117 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN--MKYH 172 + + Q ++ K GISS SQ+ + +Q G+T E Y N Sbjct: 118 AFSR--PYLRNRQVLVVKKNSGISSFSQMKKYELGMQTGSTAEQW---YETKQNILHAKK 172 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP-DIISKSPLAPAII 231 ++++ + A R D + + ++ D + A + Sbjct: 173 TVLYDTISNSFLDLNAGRIQGILLDEVYANYYIAHMAKSKNYKVIQNDAVPMDLFAVGMR 232 Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 +GD V+ + +L Q N +K+++ Sbjct: 233 KGDKTLRKKVNQGLEKLQKNGKLK--QLNEKWFNKNSS 268 >gi|332180727|gb|AEE16415.1| ABC-type transporter, periplasmic subunit family 3 [Treponema brennaborense DSM 12168] Length = 269 Score = 136 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 45/267 (16%), Positives = 93/267 (34%), Gaps = 14/267 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNA------SILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 K ++ ++ T F+ + L ++K RG G++ + D Sbjct: 1 MKKMLAAVCACALIAGTVFAGGKKDSGVDNSLEELKTRGVFVLGLDDSFPPLGFRNESND 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G+D+D + + ++ P++ + L + ID + T RE + Sbjct: 61 IAGYDIDLAAEVCRRLGVT---LKCQPIDWAAKEQELNTGNIDCIWNGFTMTPEREQA-- 115 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 L+F + Q I+ GI +++ L+G SI +QAG++ + + + Sbjct: 116 LSFSKPYLDNAQVVIVRGNSGIKTLADLAGKSIGLQAGSSAADAVEAAPEFKKSVKEIVE 175 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F+ D D+ T+ + V+L + +S + D Sbjct: 176 FKDNLTALMDLEIKGVDGVVMDMVVGNYSIKTSGK--NFVVLDEHLSSEKYGIGFRKRDV 233 Query: 236 EWYNIVSWTHYAMVTAEEL-GITQKNI 261 + + V M + I+QK Sbjct: 234 KLRDEVQSVLEQMAADGTVAAISQKWF 260 >gi|257093638|ref|YP_003167279.1| family 3 extracellular solute-binding protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046162|gb|ACV35350.1| extracellular solute-binding protein family 3 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 268 Score = 136 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 37/232 (15%), Positives = 73/232 (31%), Gaps = 9/232 (3%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 + G++ GFD+D + +++++ P++ + L SK Sbjct: 42 IVVGLDDNFPPMGFRDEKNTLVGFDIDLAGEAGKRLG---AEVKFKPIDWNAKEAELNSK 98 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 ++D+L T R+ + + Q ++ K + + + L+G + VQ G++ Sbjct: 99 RVDVLWNGLTITEARKEKILF--TTPYLENRQIIVVTDKSPVKTKADLAGKVVGVQDGSS 156 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215 + F A R DA D + T +P E+ Sbjct: 157 AIEAVEKDAATAKSLKELKKFGDNVTALMDLGAGRLDALVVD--EVVGRYYTTKKPGEYR 214 Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 +L + + DTE + T M KD Sbjct: 215 VLDENFGTEDYGVGTRKDDTELMAKLQKTLDEMKKDGSAAAIST--KWFGKD 264 >gi|171316557|ref|ZP_02905773.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MEX-5] gi|171098285|gb|EDT43091.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MEX-5] Length = 266 Score = 136 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 47/244 (19%), Positives = 87/244 (35%), Gaps = 12/244 (4%) Query: 17 FTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 FT+ + +A +L +KK G L+ G+ F +G +GFDVD A++ + Sbjct: 19 FTAVAAHAEDLLDSVKKAGVLRVGLEGTYPPFNSRGTSGQLEGFDVDVANAVAGKLG--- 75 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK- 134 K Q++P LQ+ + D++ T R+ L + P TY Q Sbjct: 76 VKTQFIPTEWSGIIAGLQAGKFDVIVNQVTITPQRKEVLDFSQ-PYTYSAAQLIQRKDDT 134 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 + S+ G + V GT D + E A R +A Sbjct: 135 RNFKSLEDFKGKKLGVTLGTNY-----DQMARSVPGIEVQTYPGAPEKLRDLAAGRIEAT 189 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D L + T++ P + + + +A +G+ ++ ++ ++ L Sbjct: 190 LDDRLMLPYMIKTSNLPLRSGAVLNGGKQE-MAIPFRKGNPKFEKAINDALDSLRKDGTL 248 Query: 255 GITQ 258 Sbjct: 249 KKIS 252 >gi|229125463|ref|ZP_04254520.1| Amino acid ABC transporter, amino acid-binding protein [Bacillus cereus 95/8201] gi|228657991|gb|EEL13774.1| Amino acid ABC transporter, amino acid-binding protein [Bacillus cereus 95/8201] Length = 262 Score = 136 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 42/280 (15%), Positives = 97/280 (34%), Gaps = 31/280 (11%) Query: 1 MYK-DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M + + I+ + T S K+ L GI+ N GF Sbjct: 6 MKRLTTIILIIAAVFAVITGCSKPKE-----KEDNTLVIGIDDKFAPMGFRDENNKIVGF 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D+ +A + + +K+++ P++ K + L S +ID++ T R+ + Sbjct: 61 DIDYAKAAAEKLG---TKVKFQPIDWKTKESELSSGRIDLIWNGYTITDDRKNKVLF--T 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Q + ++ ++ L + +Q+ ++ L +K F Sbjct: 116 KPYLKNAQVVVTLSNSPLTKLNNLEAKVVGLQSLSSASDALNSNPIKSKIK-TVTEFADN 174 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 ++ R DA D + IL + +S + +G+ Sbjct: 175 VSALNDLKSGRLDAVVIDEVVINYYMTKEK--DTFKILDESLSPEEYGVGVKKGNDALLK 232 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV-QRFLG 278 + QK ++++++D T ++ +++ G Sbjct: 233 KL----------------QKALDEMNRDGTAAEISKKWFG 256 >gi|302669343|ref|YP_003832493.1| amino acid ABC transporter substrate-binding protein [Butyrivibrio proteoclasticus B316] gi|302397007|gb|ADL35911.1| amino acid ABC transporter substrate-binding protein [Butyrivibrio proteoclasticus B316] Length = 255 Score = 136 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 52/274 (18%), Positives = 93/274 (33%), Gaps = 26/274 (9%) Query: 1 MYKDF----FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K S+L + L + A G L G N F V +G+ Sbjct: 1 MKKKIISVVLASLLTVASLAGCGSAAKADTNNT---NGTLVVGTNAAFPPFEYVGDDGEP 57 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFD+ +A+ I D +Q + ++ S +ID+ T R+ ++ Sbjct: 58 DGFDMALIKAVGEKIGMD---VQIQDMEFDSLVSSIGS-KIDVAIAGMTVTEERQKTVDF 113 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + Y Q I+ K I++ L +I VQ GTT E + + + Sbjct: 114 SES--YYEAVQAVIVPKDSAIANADDLKNLTIGVQLGTTGE-----FIADEIEGVNVSAY 166 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP---DIISKSPLAPAIIQG 233 + + R D D + A + +LP A A+ +G Sbjct: 167 NKAVDAVNDLINGRLDCVIVDKN--PAEVFGTQYSDKVNVLPGTDFDFEPEFYAIALPKG 224 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 +TE N ++ A+ + G + + ++ Sbjct: 225 NTELANKIN---TAIQELKADGTYDNLVKEYIEE 255 >gi|90414857|ref|ZP_01222823.1| putative amino acid ABC transporter [Photobacterium profundum 3TCK] gi|90324035|gb|EAS40626.1| putative amino acid ABC transporter [Photobacterium profundum 3TCK] Length = 269 Score = 136 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 52/251 (20%), Positives = 92/251 (36%), Gaps = 17/251 (6%) Query: 1 MYKDFFVSILCLIILFFT-SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + + ++ T + + S L DIK+RG L+ G++T V +A G+ GF Sbjct: 1 MKKLLAACLAVITLMMGTNALAAEKSTLIDIKERGTLRVGLST-FVPWAMRDKQGELVGF 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 +VD R L+ K++++P AL + + D++ T R +S+ Sbjct: 60 EVDVARRLAKDAG---LKVEFIPTAWDGIIPALLAGKFDVIIGGLSITPQRNMSVLF--T 114 Query: 120 PITYFDGQGFIMHKKKGIS--SVSQLSGASI--CVQAGTTTELTLADYFKAHNMKYHPIV 175 G +K+K +++ + S+ V+ G T T YF Sbjct: 115 APYAHSGVQLAANKEKSADKLTIADYNKRSVTLSVRRGAFTVETAKKYFPKA----KLRQ 170 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F+ + A S + L D +S+ A AI G+ Sbjct: 171 FDDDAQAFQEVLNGNAHAVLA-SSPKPEQMAIQYNEKLFIPLTDRLSRGSEAFAIRHGEF 229 Query: 236 EWYN-IVSWTH 245 + N +W Sbjct: 230 DLLNFFNNWIL 240 >gi|167837541|ref|ZP_02464424.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia thailandensis MSMB43] Length = 266 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 51/274 (18%), Positives = 92/274 (33%), Gaps = 18/274 (6%) Query: 2 YKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 +K F S L +L + S +A +L ++++ G LK + F +G +GFD Sbjct: 4 FKPMFTSTLVAALLGIATASAHAADLLDNVRQAGVLKIALEGTYPPFDYRNGDGQLEGFD 63 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + +++ + P Q++ LQ+ + D++ T R+ +L + Sbjct: 64 VDVAKEVAARLGVKP---QFVTTEWSGILAGLQAGKFDVIVNQVGITPARKQALDFSQPY 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + K + L G I V GT AD K + Sbjct: 121 VYSAAQLIQRADDKHDYGAPGALQGKRIGVTLGT----NFADLAKT-LQGVDVKTYPGAP 175 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTND---RPSEHVILPDIISKSPLAPAIIQGDTEW 237 E A R D D L L RP + + + +G+ ++ Sbjct: 176 EKLRDVAAGRIDVSMDDRLMLPYLIKNAHMPLRPGATIKGGET----QMGIPFRKGNPKF 231 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + +M L ++ DT+ P Sbjct: 232 AKAIDDALASMRADGTLKKIS--VHWFGVDTSTP 263 >gi|213586572|ref|ZP_03368398.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 232 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 47/240 (19%), Positives = 83/240 (34%), Gaps = 16/240 (6%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 +K+RG L G+ F+ +G GF+VDF AL+ + K P Sbjct: 2 KVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVDFAEALAKHLG---VKASLKPTKWDGM 58 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGA 146 +L SK+ID++ + +R+ G ++ K I + + L G Sbjct: 59 LASLDSKRIDVVINQVTISDVRKKKYDF--STPYTVSGVQALVKKGNEGTIKTAADLQGK 116 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 + V GT ++ + H ++ R R DA D L AL L Sbjct: 117 KVGVGLGT----NYEEWLRQHVQGVDIRTYDDDPTKYQDLRVGRIDAILVDR--LAALDL 170 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 + D S+ A+ +G+ + V A+ ++ G + + Sbjct: 171 VKKTKGTLAVTGDAFSRQESGVALRKGNEDLLKAVD---NAIAEMQKDGTLKALSEKWFG 227 >gi|53719480|ref|YP_108466.1| putative ABC transporter cystine-binding protein [Burkholderia pseudomallei K96243] gi|53723464|ref|YP_102925.1| amino acid ABC transporter periplasmic amino acid-binding protein [Burkholderia mallei ATCC 23344] gi|67640271|ref|ZP_00439084.1| cystine ABC transporter, periplasmic cystine-binding protein [Burkholderia mallei GB8 horse 4] gi|121601368|ref|YP_993059.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia mallei SAVP1] gi|124385440|ref|YP_001026394.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia mallei NCTC 10229] gi|126439839|ref|YP_001058845.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 668] gi|126450875|ref|YP_001080333.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia mallei NCTC 10247] gi|126455413|ref|YP_001066091.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 1106a] gi|134282256|ref|ZP_01768961.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 305] gi|167003921|ref|ZP_02269700.1| cystine ABC transporter, periplasmic cystine-binding protein [Burkholderia mallei PRL-20] gi|167719753|ref|ZP_02402989.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei DM98] gi|167738748|ref|ZP_02411522.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 14] gi|167845887|ref|ZP_02471395.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei B7210] gi|167894457|ref|ZP_02481859.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 7894] gi|167902858|ref|ZP_02490063.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei NCTC 13177] gi|167911101|ref|ZP_02498192.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 112] gi|167919121|ref|ZP_02506212.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei BCC215] gi|217423617|ref|ZP_03455118.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 576] gi|226196423|ref|ZP_03792005.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei Pakistan 9] gi|237812103|ref|YP_002896554.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei MSHR346] gi|242315262|ref|ZP_04814278.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 1106b] gi|254177632|ref|ZP_04884287.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia mallei ATCC 10399] gi|254188664|ref|ZP_04895175.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei Pasteur 52237] gi|254197646|ref|ZP_04904068.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei S13] gi|254199867|ref|ZP_04906233.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia mallei FMH] gi|254206195|ref|ZP_04912547.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia mallei JHU] gi|254358593|ref|ZP_04974866.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia mallei 2002721280] gi|52209894|emb|CAH35866.1| putative ABC transport system, cystine-binding protein [Burkholderia pseudomallei K96243] gi|52426887|gb|AAU47480.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia mallei ATCC 23344] gi|121230178|gb|ABM52696.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia mallei SAVP1] gi|124293460|gb|ABN02729.1| cystine ABC transporter, periplasmic cystine-binding protein [Burkholderia mallei NCTC 10229] gi|126219332|gb|ABN82838.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 668] gi|126229055|gb|ABN92595.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 1106a] gi|126243745|gb|ABO06838.1| cystine ABC transporter, periplasmic cystine-binding protein [Burkholderia mallei NCTC 10247] gi|134246294|gb|EBA46383.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 305] gi|147749463|gb|EDK56537.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia mallei FMH] gi|147753638|gb|EDK60703.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia mallei JHU] gi|148027720|gb|EDK85741.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia mallei 2002721280] gi|157936343|gb|EDO92013.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei Pasteur 52237] gi|160698671|gb|EDP88641.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia mallei ATCC 10399] gi|169654387|gb|EDS87080.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei S13] gi|217393475|gb|EEC33496.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 576] gi|225931640|gb|EEH27645.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei Pakistan 9] gi|237502856|gb|ACQ95174.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei MSHR346] gi|238520963|gb|EEP84418.1| cystine ABC transporter, periplasmic cystine-binding protein [Burkholderia mallei GB8 horse 4] gi|242138501|gb|EES24903.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 1106b] gi|243060613|gb|EES42799.1| cystine ABC transporter, periplasmic cystine-binding protein [Burkholderia mallei PRL-20] Length = 264 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 59/272 (21%), Positives = 102/272 (37%), Gaps = 19/272 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K V+ L + F + + A +L ++K+RG L+ G+ F G+ GFDVD Sbjct: 7 KKLLVTGL-IGASFAAATAHAADLLDEVKQRGTLRIGLEGTFPPFNSKNPQGELVGFDVD 65 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 +A+++ + P +++ LQ+ + D++ T R+ +L P Sbjct: 66 IAKAIAAKLGVKP---EFVTTEWSGIIAGLQAGKFDVIVNQVGITDPRKQTLDF--SPAY 120 Query: 123 YFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 F I K S+ L G + V G T + +A ++K +P Sbjct: 121 TFSSAQLIQRKDDARQFKSLEDLKGKKLGVALG-TNYMDMAKSVPGIDVKTYPGA----P 175 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E A R DA D L L P ++ S +P +G+ ++ Sbjct: 176 EYLRDLAAGRLDAALNDRLMLAYLTKNAQLP--LRPGANVGSANPSGIPFKKGNPKFAKA 233 Query: 241 VSWTHYAMVTAEELGITQKNINQVSK-DTTNP 271 ++ AM E G K ++ D T P Sbjct: 234 IAD---AMTQLEADGTFTKISDKWFGIDVTKP 262 >gi|73542273|ref|YP_296793.1| extracellular solute-binding protein [Ralstonia eutropha JMP134] gi|72119686|gb|AAZ61949.1| extracellular solute-binding protein, family 3 [Ralstonia eutropha JMP134] Length = 270 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 47/272 (17%), Positives = 88/272 (32%), Gaps = 16/272 (5%) Query: 3 KDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K + L ++ + +A +L +K+ G LK G+ F + GFDV Sbjct: 10 KSLLAASLIAGAAGLSATAASAADLLDTVKQAGVLKIGLEGTYPPFGFRNPKNELDGFDV 69 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D RA+++ + P +++ LQ+ + D++ T R L F Sbjct: 70 DVARAVAAKLGVKP---EFVTTEWSGIIAGLQAGKFDVIVNQVSVTPQR--KQVLDFSTP 124 Query: 122 TYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + I K +S+ L G + V G+ + Sbjct: 125 YVYSAAQLIQRKDDKREFNSLEALKGHKLGVSLGSNYNE-----LAKSVPGIDVKTYPGA 179 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A R DA D + L T + P + + +A + + ++ Sbjct: 180 PEYLRDLAAQRVDAALNDRLMVNYLIKTANLPLRPGAVVAGANAE-VAIPFRKDNPKFAQ 238 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + + L T+ ++ D T P Sbjct: 239 AIDHALDDLRKDGTL--TKLSVKWFGSDVTKP 268 >gi|319945077|ref|ZP_08019339.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lautropia mirabilis ATCC 51599] gi|319741647|gb|EFV94072.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lautropia mirabilis ATCC 51599] Length = 270 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 49/250 (19%), Positives = 81/250 (32%), Gaps = 13/250 (5%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 L +++RG L+ GI F G + GF++D AL+ + K Q+ Sbjct: 31 AADDALNAVQQRGTLRIGIEGTYPPFNYQDEKGQFVGFEIDLGNALAETLG---VKAQFQ 87 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSV 140 P AL S +ID++ T R+ + P T Q K + S Sbjct: 88 PTKWDGLLAALDSGRIDVIINQVTITDARQKKYRFSQ-PYTVSGIQAVTRTKDADTLQSP 146 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + L+G + V GT+ E + +E + R DA D Sbjct: 147 NALAGKKVGVGLGTSYEEWARRTVPSA----EVRTYEDDPTKNQDLAVGRLDAVLVDR-- 200 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L AL + + S+ + D + + + L T+ + Sbjct: 201 LAALYQVKQSKNRFALGGPAFSRQTSGIPTRKSDESLHQAIDQALEKLRADGTL--TKLS 258 Query: 261 INQVSKDTTN 270 D TN Sbjct: 259 NKWFDTDVTN 268 >gi|194468314|ref|ZP_03074300.1| extracellular solute-binding protein family 3 [Lactobacillus reuteri 100-23] gi|194453167|gb|EDX42065.1| extracellular solute-binding protein family 3 [Lactobacillus reuteri 100-23] Length = 283 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 44/272 (16%), Positives = 95/272 (34%), Gaps = 17/272 (6%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 T + I++R + G++ V + NG G+DVD RA+ Sbjct: 25 SVTKRADTQDTWNRIERRKRVIVGLDDSFVPMGFRQKNGKLVGYDVDLARAVFKQYG--- 81 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 K+ + P++ + L++ ID+L R + + + Q + KK Sbjct: 82 IKVDFQPIDWSMKETELKNGTIDLLWNGYSVNPSRAKKVAFSR--YYLENRQILVTKKKS 139 Query: 136 GISSVSQLSGASICVQAGTTTELTLAD---YFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 I +++ ++G ++ VQ G+T L + K + P++++ A+R Sbjct: 140 NIKNLNGMTGKTLGVQNGSTGVTVLDEKPKLLKDKIKNHTPVLYDTFPNAFIDLNANRIQ 199 Query: 193 AYTGDISALYALKLTNDRPSEHVI-LPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 D + + + + A + +GD + + Sbjct: 200 GILMDEVYANYYIKHQPNSNSYRTYISKELPMEHFAVGMRKGDKTLK---KKINQGLGNL 256 Query: 252 EELGITQKNINQVSKDTTNPDVQRFLGIDKSS 283 ++ G +K + +N +LG D + Sbjct: 257 QKNGELRKLNEKWFGQDSN-----YLGPDNTK 283 >gi|42522401|ref|NP_967781.1| glutamine transport system substrate-binding protein [Bdellovibrio bacteriovorus HD100] gi|39574933|emb|CAE78774.1| Glutamine transport system substrate-binding protein [Bdellovibrio bacteriovorus HD100] Length = 262 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 44/274 (16%), Positives = 85/274 (31%), Gaps = 16/274 (5%) Query: 1 MYKDFFVSILCLIILFFTSF---STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M + + CL+++ S A + L G + F A+ Sbjct: 1 MKRLSLLITSCLLLMTLGCTKKESGTADTAAKTSAKKELTVGTDAAYAPFEIENADKSIS 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD++ +A+++ + + + F L+S DIL R+ ++ + Sbjct: 61 GFDIEIIQAIAAK---QGLTLNIVNTPWEGLFSQLESGDRDILISAITINDERKKTMDFS 117 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + Q + +S L + VQ GTT + + + FE Sbjct: 118 E--PYFDAVQLIAVPNSSKVSKFDDLKKLKVGVQIGTTGDEVVTRLLGRASSNIK--RFE 173 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDTE 236 DA D + P + +L D SK A+ +G+T+ Sbjct: 174 GTPLALQELINGGVDAVVADNGVINNFFAN--NPKDFKVLSDTTFSKEQYGIAVKKGNTD 231 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 ++ A+ G + + N Sbjct: 232 LLKKINDGLAAIKA---DGTYDSIFKKYFGEKKN 262 >gi|320177302|gb|EFW52306.1| Glutamine ABC transporter, periplasmic glutamine-binding protein [Shigella dysenteriae CDC 74-1112] Length = 248 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 53/268 (19%), Positives = 93/268 (34%), Gaps = 24/268 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M VS+ L ++F S L +T V F + + + GFD Sbjct: 1 MKSVLKVSLAALTLVFAVSSHA---------ADKKLVVATDTAFVPFEFKQGD-KYVGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A++ + D + P++ ALQ+K +D+ T R+ ++ + Sbjct: 51 VDLWAAIAKELKLD---YELKPMDFSGIIPALQTKNVDLALAGITITDERKKAIDFSDG- 106 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G ++ + SV L G + V++GT + DY KA+ F + Sbjct: 107 -YYKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNI 161 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + +R DA D + T + + D + A +G E + Sbjct: 162 DNAYMELGTNRADAVLHDTPNILYFIKTAGN-GQFKAVGDSLEAQQYGIAFPKGSDELRD 220 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKD 267 V+ T T E G + + Sbjct: 221 KVNGTLK---TLRENGTYNEIYKKWFGT 245 >gi|331667180|ref|ZP_08368045.1| glutamine-binding periplasmic protein (GlnBP) [Escherichia coli TA271] gi|331065536|gb|EGI37429.1| glutamine-binding periplasmic protein (GlnBP) [Escherichia coli TA271] Length = 248 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 52/267 (19%), Positives = 91/267 (34%), Gaps = 23/267 (8%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K L + L F S A L +T V F + + + GFDV Sbjct: 1 MKSVLKVSLAALTLAFAVSSHAADK--------KLVVATDTAFVPFEFKQGD-KYVGFDV 51 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D A++ + D + P++ ALQ+K +D++ T R+ ++ + Sbjct: 52 DLWAAIAKELKLD---YELKPMDFSGIIPALQTKNVDLVLAGITITDERKKAIDFSDG-- 106 Query: 122 TYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G ++ + SV L G + V++GT + DY KA+ F ++ Sbjct: 107 YYKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNID 162 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +R DA D + T + + D + A +G E + Sbjct: 163 NAYMELGTNRADAVLHDTPNILYFIKTAGN-GQFKAVGDSLEAQQYGIAFPKGSDELRDK 221 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKD 267 V+ T E G + + Sbjct: 222 VNGALK---TLRENGTYNEIYKKWFGT 245 >gi|225870392|ref|YP_002746339.1| amino acid ABC transporter, extracellular amino acid-binding protein [Streptococcus equi subsp. equi 4047] gi|225699796|emb|CAW93609.1| putative amino acid ABC transporter, extracellular amino acid-binding protein [Streptococcus equi subsp. equi 4047] Length = 278 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 35/275 (12%), Positives = 84/275 (30%), Gaps = 16/275 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTN-----ASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 + K V++ + + + K++ + G + V +G Sbjct: 3 LKKTLLVALFAATATLLVACGASNKQTSSDAWDSYKQKKTITLGFDNTFVPMGYKDESGK 62 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFD++ +A+ ++Y +N + L + +ID++ T R+ + Sbjct: 63 NTGFDIELAKAVFDQYG---INVKYQAINWDLKETELNNGKIDLIWNGYSVTKERQAKVA 119 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH--- 172 + Q + K ISS + + ++ Q+G++ + K Sbjct: 120 FTE--PYMKNEQVLVTQKSSQISSFADMKNKTLGAQSGSSGYDAFTSHPKVLKDLVKGND 177 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 +E + + R D D + I+ A + + Sbjct: 178 ATQYETFTQAFIDLKNKRIDGLLIDRVYANYYLQQEGELDRYNIIASEFEGEDFAVGVRK 237 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 D ++ ++ + G QK + + Sbjct: 238 ADKTLQKKITQALKSLY---QDGTFQKISKKWFGE 269 >gi|325528847|gb|EGD05895.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia sp. TJI49] Length = 266 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 49/253 (19%), Positives = 92/253 (36%), Gaps = 15/253 (5%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 S A +L +K+ G LK + F A+G +GFDVD +A+++ + P Q+ Sbjct: 24 SHAADLLDTVKQAGVLKIALEGTYPPFDYRNADGQLEGFDVDVAKAVAARLGVKP---QF 80 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + LQ+ + D++ T R +L + + + + S+ Sbjct: 81 VTTEWSGILAGLQAGKFDVIVNQVAITPSRRQALDFSQPYVYSSAQLLQRQNDARAFRSL 140 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 +L G + V G+ + V+ E A R DA D Sbjct: 141 DELKGKKVGVTMGSNYVDLV-----KRVPAIDLQVYPGTPENLRDLAAGRIDAAVNDRLM 195 Query: 201 LYALKLTNDRPSE-HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L L + P +L D + +G+ ++ + A+ + ++ G +K Sbjct: 196 LNYLIKNSHLPLRPGSVLADG--ADEMGIPFRKGNPKFAKALDD---AIASLQQDGTLKK 250 Query: 260 -NINQVSKDTTNP 271 ++ DTT P Sbjct: 251 ISMQWFGSDTTKP 263 >gi|54302943|ref|YP_132936.1| putative amino acid ABC transporter [Photobacterium profundum SS9] gi|46916371|emb|CAG23136.1| putative amino acid ABC transporter [Photobacterium profundum SS9] Length = 269 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 52/251 (20%), Positives = 91/251 (36%), Gaps = 17/251 (6%) Query: 1 MYKDFFVSILCLIILFFT-SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + + ++ T + + S L DIK+RG L+ G++T V +A G+ GF Sbjct: 1 MKKLLAACLAVMTLMMGTNALAAEKSTLIDIKERGTLRVGLST-FVPWAMRDKQGELVGF 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 +VD R L+ K++++P AL + + D++ T R +S+ Sbjct: 60 EVDVARRLAKDAG---LKVEFIPTAWDGIIPALLAGKFDVIIGGLSITPQRNMSVLF--T 114 Query: 120 PITYFDGQGFIMHKKKGISS--VSQLSGASI--CVQAGTTTELTLADYFKAHNMKYHPIV 175 G +K+K ++ + S+ V+ G T T YF Sbjct: 115 SPYAHSGVQLAANKEKSADKLAIADYNKRSVTLSVRRGAFTVETAKKYFPKA----KLRQ 170 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F+ + A S + L D +S+ A AI G+ Sbjct: 171 FDDDAQAFQEVLNGNAHAVLA-SSPKPEQMAIQYNEKLFIPLTDRLSRGSEAFAIRHGEF 229 Query: 236 EWYN-IVSWTH 245 + N +W Sbjct: 230 DLLNFFNNWIL 240 >gi|317486283|ref|ZP_07945115.1| bacterial extracellular solute-binding protein, family 3 [Bilophila wadsworthia 3_1_6] gi|316922453|gb|EFV43707.1| bacterial extracellular solute-binding protein, family 3 [Bilophila wadsworthia 3_1_6] Length = 246 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 44/268 (16%), Positives = 90/268 (33%), Gaps = 23/268 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M++ S+L +++L ++F+ L N + N + G+D Sbjct: 1 MFRTVLTSLLAVLVLCGSAFAAE----------KTLIAAANPTWPPMEFLDENKNIIGYD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D A++ I K ++ + F +L+S Q ++++ T R+ + Sbjct: 51 RDIIAAIAEEIG---MKSEFRNIAWDGIFASLESGQANVIASCVTITDKRKKAYVF--SD 105 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y Q ++ K I L G + VQ GTT L + N+ ++ V Sbjct: 106 PYYEVHQAVVVAKDSAIKKPEDLKGKKVGVQIGTTAIEAL----RKMNVDIDLRTYDEVG 161 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS-KSPLAPAIIQGDTEWYN 239 + R R D D + + + + + + + + E Sbjct: 162 LVFEDMRNGRLDVVVCDDPVARYYASRKEGYKDLMKVAFLTEDVEYIGFVFSKDNAELAA 221 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKD 267 V+ A+ E G + N+ + Sbjct: 222 QVNKGLKAI---RENGKEKAIRNKWLGE 246 >gi|26986970|ref|NP_742395.1| cystine transporter subunit [Pseudomonas putida KT2440] gi|24981584|gb|AAN65859.1|AE016214_4 cysteine ABC transporter, periplasmic cysteine-binding protein, putative [Pseudomonas putida KT2440] Length = 264 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 48/244 (19%), Positives = 85/244 (34%), Gaps = 14/244 (5%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + L I+++G + G+ F+ NG GF+V+ L+ + K + Sbjct: 25 AFAGEQLKTIQEKGVINVGLEGTYPPFSFQDENGKLTGFEVELSELLAKELG---VKAKI 81 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK---GI 137 P AL+SK++D++ + R+ + P T Q I+ KK I Sbjct: 82 QPTKWDGILAALESKRLDVVVNQVTISEERKKKYDFSE-PYTVSGIQALILKKKAEQLNI 140 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 L+G + V GT E + + +E A R R DA D Sbjct: 141 KGAQDLAGKKVGVGLGTNYEQWVKKDVPQAD----VRTYEDDPSKFADLRNGRIDAILID 196 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 L AL+ + + D S+ A+ +G+ E ++ + L Sbjct: 197 R--LAALEYAQKA-KDTELAGDAFSRLESGVALRKGEPELLAAINKAIDKLKADGTLAKL 253 Query: 258 QKNI 261 + Sbjct: 254 SEKY 257 >gi|303229960|ref|ZP_07316734.1| putative glutamine ABC transporter, periplasmic glutamine-binding protein GlnH [Veillonella atypica ACS-134-V-Col7a] gi|302515326|gb|EFL57294.1| putative glutamine ABC transporter, periplasmic glutamine-binding protein GlnH [Veillonella atypica ACS-134-V-Col7a] Length = 260 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 56/273 (20%), Positives = 107/273 (39%), Gaps = 23/273 (8%) Query: 1 MYK-DFFVSILCLIILFFTSFSTNASILGDI-KKRGFLKCGINTGLVGFAEVKANGDWKG 58 M+K +I + + + S + ++ G L+ G T F + + + G Sbjct: 1 MFKFKKLTAIALVAVAAMGLLAGCGSEKSKMTQEAGVLRVGSETTFPPFEFTEGD-KYVG 59 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD A++ + K+++ + A+QS ID+++ + T RE +L + Sbjct: 60 FDVDLSEAIAKKLG---LKMEFKSMGFDALIPAVQSGDIDMIAAGINATPEREKALDFSD 116 Query: 119 RPITYFDGQGFIM---HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 YFD GFI I ++ +L+G ++ VQ GT Sbjct: 117 V---YFDQGGFITVVRKNNTSIHNMDELAGKTVGVQIGTVPVD-----MAKAIPNTTVKE 168 Query: 176 FERVEEIDAAYRAHRCDAYTGDIS-ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + I +A D D + A+Y LK D+ + ++ + + + +G+ Sbjct: 169 MDSNANIFMELKAGTIDGAIIDNAVAMYYLKQGADK--DLKLVGEPTKAPGIVLGVKKGN 226 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 E + V+ A+ +E G QK ++ D Sbjct: 227 KELQDAVN---KALKELKEDGTYQKIYDKWFGD 256 >gi|148545498|ref|YP_001265600.1| cystine transporter subunit [Pseudomonas putida F1] gi|148509556|gb|ABQ76416.1| extracellular solute-binding protein, family 3 [Pseudomonas putida F1] Length = 264 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 48/244 (19%), Positives = 85/244 (34%), Gaps = 14/244 (5%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + L I+++G + G+ F+ NG GF+V+ L+ + K + Sbjct: 25 AFAGEQLKTIQEKGVINVGLEGTYPPFSFQDENGKLTGFEVELSELLAKELG---VKAKI 81 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK---GI 137 P AL+SK++D++ + R+ + P T Q I+ KK I Sbjct: 82 QPTKWDGILAALESKRLDVVVNQVTISEERKKKYDFSE-PYTVSGIQALILKKKAEQLNI 140 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 L+G + V GT E + + +E A R R DA D Sbjct: 141 KGAQDLAGKKVGVGLGTNYEQWVKKDVPQAD----VRTYEDDPSKFADLRNGRIDAILID 196 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 L AL+ + + D S+ A+ +G+ E ++ + L Sbjct: 197 R--LAALEYAQKA-KDTQLAGDAFSRLESGVALRKGEPELLAAINKAIDKLKADGTLAKL 253 Query: 258 QKNI 261 + Sbjct: 254 SEKY 257 >gi|86610271|ref|YP_479033.1| amino acid transporter, periplasmic amino acid-binding protein [Synechococcus sp. JA-2-3B'a(2-13)] gi|86558813|gb|ABD03770.1| amino acid transporter, periplasmic amino acid-binding protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 309 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 37/210 (17%), Positives = 69/210 (32%), Gaps = 11/210 (5%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 +I G L+ + L GD +GF+++ L S + ++ +P++ ER Sbjct: 73 EIVDSGRLRVAVKDNLRPLGFRTPQGDLQGFEIELACELGSRLLGSAEAVELVPVSNVER 132 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 L Q+D+ T R + Y DG ++ + S S L G + Sbjct: 133 LQVLADGQVDLAIAQIGITPDRARQVEFTSA--YYQDGPSLVVARSHNWESWSDLRGGRV 190 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL---- 204 V G++ L Y + + E + D S L Sbjct: 191 AVLRGSSAIPLLNRYLP----GVELVPVDSYREGAELLLKGAVQGWAADRSVLAGWLAEH 246 Query: 205 -KLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + + + L ++ L A+ +G Sbjct: 247 PRRESAAEQQFQFLGSPLATVGLGIAMPKG 276 >gi|70733919|ref|YP_257559.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas fluorescens Pf-5] gi|68348218|gb|AAY95824.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas fluorescens Pf-5] Length = 265 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 52/253 (20%), Positives = 96/253 (37%), Gaps = 17/253 (6%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + A + D KRG LK G++ + F G+ GF+VD +A++ ++ K++ Sbjct: 20 TAQAGAIDDAVKRGTLKVGMDPTYMPFEMTNKRGEIIGFEVDLLKAMAKSMG---VKLEM 76 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGIS 138 + AL + + D++ T R L L F GQ ++ K I Sbjct: 77 VSTGYDGIIPALLTDKFDMIGSGMTLTQERN--LRLNFSEPFIVVGQTLLIRKDLEGTIK 134 Query: 139 SVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 S L+ A I + GTT E+ ++ +E + DA+ Sbjct: 135 SYKDLNSADYRITSKLGTTGEMVAKKLIAKAKY----HGYDNEQEAVLDVVNGKADAFIY 190 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 D + + + V L + PLA + +GD Y+ +++ + + E G Sbjct: 191 DAP-YNVVAVNKVGNGKLVFLDKPFTYEPLAFGLKKGD---YDSINFINNFLHQIHEDGT 246 Query: 257 TQKNINQVSKDTT 269 + ++ K T Sbjct: 247 YDRIHDKWFKSTE 259 >gi|322411893|gb|EFY02801.1| amino acid ABC transporter, extracellular amino acid-binding protein [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 277 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 40/283 (14%), Positives = 90/283 (31%), Gaps = 16/283 (5%) Query: 1 MYKDFFVSILCLIILFFTSFST------NASILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M + + L I L + T + +K + G + V +G Sbjct: 1 MRRSIRIVFLAAISLLLVACGTANKTAKSGDAWKTYQKEKNITLGFDNTFVPMGYKDESG 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 D KGFD+D +A+ + + +N + L++ +ID++ T R+ + Sbjct: 61 DNKGFDIDLAKAVFKQYG---ITVNFQAINWDLKEAELKNSKIDMIWNGYSMTQERQAKV 117 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + Q ++ K GI+ S + + Q+G++ L + K Sbjct: 118 AF--TVPYMKNEQVIVVKKSSGITDTSDMKNKVLGAQSGSSGYDALTRHHKVLKDLIKDQ 175 Query: 175 ---VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 +E + + +R D D ++ ++ ++ A + Sbjct: 176 DATQYETFTQAFIDLKTNRIDGLLIDKVYANYYLKQENQLDDYQLVSTGFDNEQFAVGLR 235 Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 + D ++ M E + +D ++ Sbjct: 236 KEDKTLQKKINEALKKMYQDGEFQAISQ--KWFGEDVATTQIK 276 >gi|194290845|ref|YP_002006752.1| extracellular solute-binding protein, ABC transporter periplasmic protein [Cupriavidus taiwanensis LMG 19424] gi|193224680|emb|CAQ70691.1| Putative extracellular solute-binding protein, ABC transporter, periplasmic component [Cupriavidus taiwanensis LMG 19424] Length = 263 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 41/257 (15%), Positives = 86/257 (33%), Gaps = 15/257 (5%) Query: 1 MYKDFFVSILCLIILFFT-----SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + ++ + LF S A+ + G++ AN + Sbjct: 1 MKKFAALLLISSVALFAACGKKESAPAPAAGTDT---ATRIVVGLDDNFPPMGFRDANNE 57 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFD+D + S + +++ P++ + L K++D+L T R+ ++ Sbjct: 58 LVGFDIDMAKEASRRLG---MTVEFKPIDWSAKEAELNGKRVDVLWNGLTITEERKKNIS 114 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + Q I+ + + + + L+G + Q G++ + + Sbjct: 115 F--TAPYMTNHQIVIVGTQSPVKAKADLAGRIVGAQDGSSAVDAIKKESQIAASLKELKT 172 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F A R DA D + L + R E+ +L + + + D Sbjct: 173 FGDNVTALMDLSAGRLDAIVVD--EVVGRYLISKRAGEYRVLEENFGTEDYGVGVRKDDA 230 Query: 236 EWYNIVSWTHYAMVTAE 252 E + T +M Sbjct: 231 ELLGKLDKTLASMKQDG 247 >gi|160936778|ref|ZP_02084144.1| hypothetical protein CLOBOL_01668 [Clostridium bolteae ATCC BAA-613] gi|158440270|gb|EDP18016.1| hypothetical protein CLOBOL_01668 [Clostridium bolteae ATCC BAA-613] Length = 324 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 40/233 (17%), Positives = 84/233 (36%), Gaps = 13/233 (5%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL--PLNAKERFLA 91 G L G + + NG++ GFD++ + ++ + ++Y P+ + + Sbjct: 95 GTLIVGFDQDFPPMGFMGDNGEYTGFDLELAKEVAERLG-----LEYTAQPIAWDSKDME 149 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151 L++ ID + T + + Q F++ K GI+S + L+G + Q Sbjct: 150 LEAGNIDCIWNGFTMT---GREDDYTWSEPYMANTQVFVVAKDSGIASQADLAGKIVECQ 206 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 ++ E L + + DA D + ++ Sbjct: 207 VDSSAEAALKEVPDLTATFKQLLTTADYNSAFMDLEQGAVDAIAMD-VIVAGYQIQQRN- 264 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQKNINQ 263 ++ +IL D +S +G+TE + V T M L +++K + Sbjct: 265 ADFIILEDSLSAEEYGVGFKKGNTELRDKVQATLEEMAADGTLKSVSEKWFGE 317 >gi|121604972|ref|YP_982301.1| extracellular solute-binding protein [Polaromonas naphthalenivorans CJ2] gi|120593941|gb|ABM37380.1| amino acid ABC transporter substrate-binding protein, PAAT family [Polaromonas naphthalenivorans CJ2] Length = 255 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 42/262 (16%), Positives = 92/262 (35%), Gaps = 14/262 (5%) Query: 1 MYKD--FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K F + L LF + + +A +L DI++ ++ ++TG + V G Sbjct: 1 MKKTSLFLRTALAGAALFAFAGAAHADLLKDIREAKKIRIAVDTGSPPYGFVDDALKPVG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 DV+ + L+ + ++ + + R LQ+ + DI+ + T RE + + Sbjct: 61 SDVETAQLLAQDLG---VALEMVQTTSPNRIPFLQTGKADIVVASLSVTPEREKVVDFST 117 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 K I L G + G+ + K M + ++ Sbjct: 118 PYAQILAV--VAGPKAVSIKGFDDLQGKRVATTRGSNNDRVATLGAKGAQM----VRYDD 171 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + A + + D + + A + P + ++ ++ PL + + + E Sbjct: 172 DATLVTAAVSGQADIIATSPAIVNA--VLGKSPQKDLVTKFVMQTVPLGIGMRKNEPELK 229 Query: 239 NIVS-WTHYAMVTAEELGITQK 259 ++ W + I +K Sbjct: 230 AWLNDWVTKNTQNGKLTAIYKK 251 >gi|239624576|ref|ZP_04667607.1| polar amino acid ABC transporter [Clostridiales bacterium 1_7_47_FAA] gi|239520962|gb|EEQ60828.1| polar amino acid ABC transporter [Clostridiales bacterium 1_7_47FAA] Length = 299 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 40/231 (17%), Positives = 83/231 (35%), Gaps = 9/231 (3%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 G L G + + +G++ GFD++ + ++ + + + P+ + + L+ Sbjct: 70 GTLIVGFDQDFPPMGFIGDDGEFTGFDLELAQEVAKRLG---LEYKPQPIAWDAKDMELE 126 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153 + ID + T A+ + Q F++ K GI+S + L+G + Q Sbjct: 127 AGNIDCIWNGFTMT---GREDDYAWTDAYMANTQVFVVAKDSGIASQADLAGKVVECQVD 183 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 ++ E L + + DA D + ++ ++ Sbjct: 184 SSAEAALKEVPDLTATFKDLLTTADYNTAFMDLEQGAVDAIAMD-VIVAGYQIQQRN-AD 241 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQKNINQ 263 VIL D +S + +TE + V T M L I++K + Sbjct: 242 FVILDDSLSAEEYGVGFKKDNTELRDKVQKTLEEMAADGTLKSISEKWFGE 292 >gi|330953422|gb|EGH53682.1| extracellular solute-binding protein [Pseudomonas syringae Cit 7] Length = 214 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 37/202 (18%), Positives = 74/202 (36%), Gaps = 4/202 (1%) Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 R ++ +F+DPSK++++ ++ R L + ++DI + T R + Y Sbjct: 2 RIIAKGLFNDPSKVEFVVQSSDARIPNLLTDKVDISCQFITVTASRAQQVAFTL--PYYR 59 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 +G ++ + L A V + + K ++ V+ + Sbjct: 60 EGVALLLPANSKYKEIDDLKAAGDDVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLMYQ 119 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 A + R D D S++ L + P + S A A+ +GD +W N V+ Sbjct: 120 AINSGRADTAATDQSSVKYLMVQ--NPGRYRSPAFAWSPQTYACAVKRGDQDWLNFVNTA 177 Query: 245 HYAMVTAEELGITQKNINQVSK 266 + +T E + Q Sbjct: 178 LHEAMTGVEFPAYAASFKQWFG 199 >gi|227510178|ref|ZP_03940227.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190383|gb|EEI70450.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 283 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 46/285 (16%), Positives = 96/285 (33%), Gaps = 19/285 (6%) Query: 3 KDFFVSILCLIILFFTSF---------STNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 K + I+ L+++F S TN + K+ + G++ V + Sbjct: 6 KKCPLVIVTLLLMFVLSGCRFESRQKMETNPDTWSIVSKQKKIVIGLDDSFVPMGFETKS 65 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G G+DVD +A+ K+ + P++ L++ ID++ R Sbjct: 66 GKIVGYDVDLAKAVFKQYG---IKVDFQPIDWSMNVTELRNGTIDLIWNGFSMNPQRAKK 122 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMK 170 + + + Q I KK I+S + + VQAG+ + + K Sbjct: 123 VTFSE--PYLVNKQVLISKKKNHINSFADMKNRVAGVQAGSAGAMDIDSQPKLLKDRIKN 180 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 + PI+++ E + R D + + +P K + Sbjct: 181 HTPILYDSFTEAFIDLNSDRIQGLLIDSIYAGYYIGHQRNRATYQSVPSQFPKEYYGVGM 240 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 +GDT+ + + +L K + +P +++ Sbjct: 241 RKGDTKLKQKIDAGLNRLAKDGQLAKINK--KWFGTNAYSPLMKK 283 >gi|242280779|ref|YP_002992908.1| extracellular solute-binding protein family 3 [Desulfovibrio salexigens DSM 2638] gi|242123673|gb|ACS81369.1| extracellular solute-binding protein family 3 [Desulfovibrio salexigens DSM 2638] Length = 261 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 38/255 (14%), Positives = 78/255 (30%), Gaps = 12/255 (4%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 V L + + F + L +K+ G + ++ G F + GFDVD Sbjct: 9 LAVFTLLITVSFVGCAKQEKTGLAKVKEAGEVSFAMSGGYPPFNYFNKQNELVGFDVDVA 68 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 + ++ + K++ + L+S + + T R+ + Y+ Sbjct: 69 KEVAKRLG---VKLKPVTTEWSGIIEGLRSGIYSGILGSMAATEQRKKVVDF--STPYYY 123 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 G + S +L ++ + GTT E + +++ Sbjct: 124 SGAQMFVRTDSPFKSADELKSKAVGLVTGTTFEQD-----AKNLGVSDIRLYKDDTHTLT 178 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + D D + + N + L + K +A A + D + V+ Sbjct: 179 ELSSGVIDGVITDR--VVGVNAMNSGKFKIKPLGSPLRKEDIAVAFRKEDKTLTDEVNKI 236 Query: 245 HYAMVTAEELGITQK 259 M L K Sbjct: 237 LKQMHDDGTLTKLSK 251 >gi|238061492|ref|ZP_04606201.1| glutamate-binding protein [Micromonospora sp. ATCC 39149] gi|237883303|gb|EEP72131.1| glutamate-binding protein [Micromonospora sp. ATCC 39149] Length = 325 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 44/231 (19%), Positives = 87/231 (37%), Gaps = 13/231 (5%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK-IQYLPLNAKERFLALQ 93 LK G++T E+ G + GFD++ R +++ + + + I+++P++ ++R ALQ Sbjct: 68 TLKIGVSTTGPLVGELHG-GTYSGFDIEIARYIAAQLGYEGDRRIEWVPVSTEDRVPALQ 126 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS--ICVQ 151 D++ T R + A + K I ++ L +C Sbjct: 127 GGDADMVVATFSMTEERAKLVSFAGPYLVTTQEAMVPTRLKDRIRTIEDLRDPRYKVCTS 186 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 G+TTE L + V + V + A R DA + D + L + P Sbjct: 187 GGSTTEAEL------GKHQIRVFVVKEVGDCVDGILAGRYDAVSSDETILAGF--LSKHP 238 Query: 212 SEHVILPDII-SKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 + VI+ + + + D ++V++ G T + Sbjct: 239 KDFVIVDMPFGTSEQIGVGVPISDPALRDLVAFFLDKSYQQGRRGQTSPWL 289 >gi|289522553|ref|ZP_06439407.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289504389|gb|EFD25553.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 257 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 45/262 (17%), Positives = 93/262 (35%), Gaps = 20/262 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + + LF + +A G + G F ++ G GFD Sbjct: 14 MKKCLFYLSVIALALFVSVAPVSAKTY---------VVGTSAGFPPFEYIQE-GKIVGFD 63 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A++ + ++++ ++ L + IDI++ T R + Sbjct: 64 VDLMKAIAES---QGFEVEFQDISFDSLIPGLNAGTIDIVAAGMTITEERAKVVDFTE-- 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFERV 179 Y Q ++ + G + +I VQ GTT +L + + + + F+ Sbjct: 119 PYYSANQALLVKEGSGNTLTVLFGNHNIAVQTGTTGDLWVEENLEKTGILTGKVTRFDTF 178 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 D D A + ++P V++ +II+ A+ +G+ E Sbjct: 179 VLAIQDLINGNVDGVVLDTPV--AKRYAAEKP--VVMVAEIITGEQYGLAVAKGNKELLE 234 Query: 240 IVSWTHYAMVTAEELGITQKNI 261 ++ + T+ ++ K Sbjct: 235 KLNKGLEEVKTSGKMDELLKKY 256 >gi|18313093|ref|NP_559760.1| solute-binding family 3 protein [Pyrobaculum aerophilum str. IM2] gi|18160601|gb|AAL63942.1| bacterial extracellular solute-binding proteins, family 3 [Pyrobaculum aerophilum str. IM2] Length = 282 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 51/244 (20%), Positives = 89/244 (36%), Gaps = 10/244 (4%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 + IKKRG L G + + V N G+DVD R +++A+ +++ + Sbjct: 47 SVDAIKKRGKLIVGTDATWPPWEWVMGN-QIVGWDVDIAREIANALG---VQLELRDMRF 102 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLS 144 A+++ +D+ WT RE L + Y + + + I+ V L Sbjct: 103 AGLLEAVRNGDVDLAISAITWTTEREKVLEFSM--PYYLESIVVVTKASRTDINKVEDLY 160 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G ++ VQ GTT E A + + + R DA D S AL Sbjct: 161 GKTVGVQIGTTHEEWAATNLEKPGKASVRRYDKVYPYMVEVLRRGDVDAIILDRSIATAL 220 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQKNINQ 263 LP S ++ A+ + + +V+ ++ +L I QKN Sbjct: 221 VRKFPDLKIAFELPG--SAGYISVAMPKCAQDLKLVVNQVIENLIQTGKLDQIMQKNFEL 278 Query: 264 VSKD 267 + Sbjct: 279 FLQS 282 >gi|116873682|ref|YP_850463.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria welshimeri serovar 6b str. SLCC5334] gi|116742560|emb|CAK21684.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Listeria welshimeri serovar 6b str. SLCC5334] Length = 486 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 52/278 (18%), Positives = 106/278 (38%), Gaps = 24/278 (8%) Query: 1 MYKDF---FVSILCLIILFFTSFST--NASI----LGDIKKRGFLKCGINTGLVGFAE-- 49 M K F +IL + I F+ F+T A L I+++G L G++ + Sbjct: 1 MQKHVLQKFAAILLIFIFVFSGFTTVFAADTGDETLKKIQEKGVLTVGLSADYPPYEFHQ 60 Query: 50 -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + GFDV + ++ + K+ +N +L++ ++D++ T Sbjct: 61 TIDGKDKVVGFDVSIAKKIAKDL---DVKLDIKEMNFDSLLGSLKTGKVDMIISGMSPTP 117 Query: 109 LREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 R+ + F Q ++ K K +SV+ +G + Q TT E D K Sbjct: 118 ERQKEVDF--SDPYMFVQQRVVVKKTDKDKFTSVNDFNGIKVGAQKQTTQE----DLAKN 171 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + ++V ++ ++++ A + A + + I + SK Sbjct: 172 ELIGSDVVSLQKVPDLILNLKSNKMKAVVLEGPVAEAYISQDKTLALADIKFENGSKET- 230 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 A A+ +G T V+ + + L Q+ N++ Sbjct: 231 AIAMPKGSTALQEKVNTSIKDIQDTGLLKKYQEEANKL 268 >gi|222081926|ref|YP_002541291.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221726605|gb|ACM29694.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 270 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 40/266 (15%), Positives = 90/266 (33%), Gaps = 19/266 (7%) Query: 1 MYKDFFVS-----ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M + F++ + IL + A L IK R L ++ G F A Sbjct: 4 MKRRSFLAGISGALAGATILGVNARQALADTLETIKTRKKLLIAVDLGSPPFGMSDAAMQ 63 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G DV+ + L++ + ++ +P+ + R L + + DI+ + R+ + Sbjct: 64 PTGSDVETAKLLAADLGYP---LEIVPVTSPNRVPFLLTSKADIVMASFSVNEERKKVID 120 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 K I ++ + G + G+T + + Sbjct: 121 FTDA--YGVIQIVVAAPKSANIKTLQDVVGQRLGTTRGSTNDKVAT----TEAQGAEMVR 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYAL-KLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 ++ + A + + + + A+ + P E ++ + +P A + +GD Sbjct: 175 YDDDATLITALVSGQVNIMASSPQIMAAVNQRRTSDPLEVKLV---LKTNPYAIGLRKGD 231 Query: 235 TEWYNIVS-WTHYAMVTAEELGITQK 259 + ++ W + + I QK Sbjct: 232 DALKSTLNEWIAKNLANGKLNEIYQK 257 >gi|317407117|gb|EFV87121.1| amino acid ABC transporter solute-binding protein [Achromobacter xylosoxidans C54] Length = 263 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 43/258 (16%), Positives = 86/258 (33%), Gaps = 11/258 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG---FLKCGINTGLVGFAEVKANGDWK 57 M K V ++ + ++ + + + G++ AN Sbjct: 1 MKKLTAVLLVSATTMLTACGPSDNAPAASAQAPAAARKVVVGLDDNFPPMGFRDANNQIV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD + S + ++++ P++ + L K++D+L T R+ ++ Sbjct: 61 GFDVDMAKEASKRLG---LEVEFKPIDWSAKEAELNGKRVDVLWNGLTITEERKKNISF- 116 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + Q I+ + + + L+G + Q G++ +A F Sbjct: 117 -TAPYMANHQIIIVGNASPVKAKADLAGKVVGAQDGSSATDAIAKD-PVAGSIKEVKKFG 174 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 A R DA D + L + R E+ +L D + + DTE Sbjct: 175 DNVTALMDLAAGRLDAIVVD--EVVGRYLISKRAGEYRVLDDNFGTEDYGVGVRKDDTEL 232 Query: 238 YNIVSWTHYAMVTAEELG 255 + T +M G Sbjct: 233 LGKLDKTLDSMKQDGTAG 250 >gi|222445100|ref|ZP_03607615.1| hypothetical protein METSMIALI_00719 [Methanobrevibacter smithii DSM 2375] gi|261350332|ref|ZP_05975749.1| bacterial extracellular solute-binding protein, family 3 [Methanobrevibacter smithii DSM 2374] gi|222434665|gb|EEE41830.1| hypothetical protein METSMIALI_00719 [Methanobrevibacter smithii DSM 2375] gi|288861116|gb|EFC93414.1| bacterial extracellular solute-binding protein, family 3 [Methanobrevibacter smithii DSM 2374] Length = 273 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 46/246 (18%), Positives = 85/246 (34%), Gaps = 14/246 (5%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 + L G + + NG++ GFD+D + + K P++ + Sbjct: 35 VNDDKTLVVGFDAEFPPYGYKDDNGEYVGFDLDVAQEVCDRNNWTLVK---QPIDWDAKD 91 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 L S ID + + + + Q ++ GI S+S L G ++ Sbjct: 92 SELNSGSIDCIWNGFTMN---GREDQYTWSDPYFDNKQVIVVKNGSGIDSLSDLKGKNVE 148 Query: 150 VQAGTTTELTLADYFKAHNMKY-HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 Q ++ L KA + + + + CDA DI + + Sbjct: 149 TQKDSSALAALQGDQKALADTFGNLVEVADYNTAFMDLESGACDAIAVDIGVAHYQINSK 208 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 D + VIL D IS A G+TE + V T M I++++ Sbjct: 209 DNGGDFVILNDNISSEQYAIGFKNGNTELRDQVQSTLDEMFKDG-------TIDKIADKY 261 Query: 269 TNPDVQ 274 ++ D++ Sbjct: 262 SDYDIK 267 >gi|148543752|ref|YP_001271122.1| extracellular solute-binding protein [Lactobacillus reuteri DSM 20016] gi|184153158|ref|YP_001841499.1| glutamine ABC transporter substrate binding component [Lactobacillus reuteri JCM 1112] gi|227363268|ref|ZP_03847400.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri MM2-3] gi|325682124|ref|ZP_08161642.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri MM4-1A] gi|148530786|gb|ABQ82785.1| amino acid ABC transporter substrate-binding protein, PAAT family [Lactobacillus reuteri DSM 20016] gi|183224502|dbj|BAG25019.1| glutamine ABC transporter substrate binding component [Lactobacillus reuteri JCM 1112] gi|227071724|gb|EEI10015.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri MM2-3] gi|324978768|gb|EGC15717.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri MM4-1A] Length = 283 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 44/272 (16%), Positives = 95/272 (34%), Gaps = 17/272 (6%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 T + I++R + G++ V + NG G+DVD RA+ Sbjct: 25 SVTKRADTQDTWNRIERRKRVIVGLDDSFVPMGFRQKNGKLVGYDVDLARAVFKQYG--- 81 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 K+ + P++ + L++ ID+L R + + + Q + KK Sbjct: 82 IKVDFQPIDWSMKETELKNGTIDLLWNGYSVNPSRAKKVAFSR--YYLENRQILVTKKKS 139 Query: 136 GISSVSQLSGASICVQAGTTTELTLAD---YFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 I +++ ++G ++ VQ G+T L + K + P++++ A+R Sbjct: 140 NIKNLNGMTGKTLGVQNGSTGVTVLDEKPKLLKDKIKNHTPVLYDTFPNAFIDLNANRIQ 199 Query: 193 AYTGDISALYALKLTNDRPSEHVI-LPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 D + + + + A + +GD + + Sbjct: 200 GILMDEVYANYYIKHQPNSNSYRTYISKELPMEHFAVGMRKGDKTLK---KKINQGLGNL 256 Query: 252 EELGITQKNINQVSKDTTNPDVQRFLGIDKSS 283 ++ G +K + +N +LG D + Sbjct: 257 QKNGELRKLNEKWFGQDSN-----YLGPDNAK 283 >gi|62179452|ref|YP_215869.1| arginine ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62127085|gb|AAX64788.1| ABC superfamily (bind_prot), arginine transport system [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322713921|gb|EFZ05492.1| arginine ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 266 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 51/267 (19%), Positives = 94/267 (35%), Gaps = 28/267 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ T ++ F + AN GFD Sbjct: 24 MKKVLIAALIAGFSLSATAAQT-------------IRFATEASYPPFESMDANNKIVGFD 70 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL I + + +L+ ++ D + D T RE + Sbjct: 71 VDLANALCKEIDASCT---FTNQAFDSLIPSLKFRRFDAVMAGMDITPEREKQVLFT--- 124 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+D + ++ +SV QL G + VQ GTT + + D + + + ++ + Sbjct: 125 TPYYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFIMD----KHQEITTVPYDSYQ 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R DA GD + + N + P + + L A+ QG+TE Sbjct: 181 NAKLDLQNGRIDAVFGDTAVVTEWLKANPKLAPVGDKVTDKDYFGTGLGIAVRQGNTELQ 240 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVS 265 + A+ ++ G + N+ Sbjct: 241 QKFN---TALEKVKKDGTYETIYNKWF 264 >gi|271499666|ref|YP_003332691.1| family 3 extracellular solute-binding protein [Dickeya dadantii Ech586] gi|270343221|gb|ACZ75986.1| extracellular solute-binding protein family 3 [Dickeya dadantii Ech586] Length = 273 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 55/280 (19%), Positives = 95/280 (33%), Gaps = 22/280 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L L S + S L +K+ G ++ + F+ + N GFD Sbjct: 1 MKKLLTLMALALSTCLALSTAQAGSTLDRVKQTGVVRNVLFNDYPPFSYLNDNNQLVGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A++ + +K++ + + D+ + R + L F Sbjct: 61 VDVANAVAQKLG---AKLELATPGWETIVGGKWQGRWDMCICSMTPNAER--AKVLDFAT 115 Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE-- 177 Y I+HK K I S + LS + + G++ E L K F+ Sbjct: 116 PYYSTFAVLIVHKDEKNIHSAADLSNKKVGLGLGSSYENYLNKSLVIPGGKPIAFPFDHV 175 Query: 178 -----RVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 E R DA D K ++ + IL ++ + P A Sbjct: 176 QAVPTDEEMAFRNLALGPGKRLDAVISDRIT---AKPRLEKLPQLRILQELYA-EPNWIA 231 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 + +GD EW ++ T A+ L + +D T Sbjct: 232 VDKGDPEWSKTLADTITALRADGTLKAIS--MKWFGEDIT 269 >gi|241762905|ref|ZP_04760968.1| extracellular solute-binding protein family 3 [Acidovorax delafieldii 2AN] gi|241368080|gb|EER62285.1| extracellular solute-binding protein family 3 [Acidovorax delafieldii 2AN] Length = 299 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 53/234 (22%), Positives = 88/234 (37%), Gaps = 16/234 (6%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + L I++RG L GI+ F ++ A G G+ + ++ + +++ +P+ Sbjct: 25 ATLDKIRQRGKLSVGIDGASPPFGKLDPATGKTGGYQTELAADIAKRLG---VQLETVPV 81 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY-FDGQGFIMHKKKGISSVSQ 142 A R LQS ++D+L N WT RE S L+F P Y G ++ K GI+ Sbjct: 82 TANTRVQFLQSGKVDLLIANIQWT--RERSEILSFAPTPYDLIGGAALVAKASGITRWED 139 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G CV G+ LA+ A + E A + C A ALY Sbjct: 140 LRGKVACVSQGSNYAKPLAEAHGA-----VVKGLRGIPESLLALKGGTCAASVHIQPALY 194 Query: 203 ALKL--TNDRPSEHVILP--DIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 + ++ D + SP +G+ + V + Sbjct: 195 ETLNGPNGGEWKDFALVGSRDQLIPSPTVVWTRRGEADTQAFVDKAIQDWHRSG 248 >gi|317486284|ref|ZP_07945116.1| bacterial extracellular solute-binding protein, family 3 [Bilophila wadsworthia 3_1_6] gi|316922454|gb|EFV43708.1| bacterial extracellular solute-binding protein, family 3 [Bilophila wadsworthia 3_1_6] Length = 252 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 44/267 (16%), Positives = 90/267 (33%), Gaps = 24/267 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + ++ L + + T AS L +T + F +G + GFD Sbjct: 1 MKR---IAALIMGFVLMTVLVAPAS-------AKELVVAHDTNFMPFEFKGPDGKFTGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ ++ + ++ P++ LQ+ +D+ T R + + Sbjct: 51 IELWETIAKKLGLS---YKFQPMDFNGIIPGLQTGNVDVGIAGMTITPERAKVVQFSNG- 106 Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G ++ KGIS V L+G + V+ GT++ + D+ KA F Sbjct: 107 -YYTSGLKILVRDDEKGISKVEDLAGKVVAVKTGTSSVPFMKDFGKAK----ELKQFPNN 161 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + + + DA D+ + A + + ++ + QG+ E Sbjct: 162 DGMFFELLSKGVDAVVFDMPVVTAF-ANSAGKGKAKVVGPLYEGQKYGIGFAQGNEELVK 220 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSK 266 V+ + G K + Sbjct: 221 KVNGVLD---QMRKDGSYAKLYEKWFG 244 >gi|315283361|ref|ZP_07871572.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria marthii FSL S4-120] gi|313613009|gb|EFR86940.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria marthii FSL S4-120] Length = 486 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 54/278 (19%), Positives = 106/278 (38%), Gaps = 24/278 (8%) Query: 1 MYKDF---FVSILCLIILFFTSFST--NASI----LGDIKKRGFLKCGINTGLVGFAE-- 49 M K F +IL + I F+ F+T A L I+++G L G++ + Sbjct: 1 MQKHLLQKFAAILLVFIFVFSGFTTVFAADTKDETLTKIQEKGVLTVGLSADYPPYEFHQ 60 Query: 50 -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + GFDV ++ + K+ +N +L++ +ID++ T Sbjct: 61 TIDGKDKVVGFDVSIAEKIAKDL---DVKLDIKEMNFDSLLGSLKTGKIDMIISGMSPTP 117 Query: 109 LREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 R+ + F Q ++ K K +SV+ SG + Q TT E + + Sbjct: 118 ERQKEVDF--SDPYMFVQQRVVVRKTDKDKFTSVNDFSGVKVGAQKQTTQE----ELAQN 171 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + ++V ++ ++++ DA + A + + I SK Sbjct: 172 ELVGSDVVSLQKVPDLILNLKSNKVDAVVLEGPVAEAYISQDKTLAMADIKFVNGSKET- 230 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 A A+ +G T+ V+ + + L QK N++ Sbjct: 231 AIAMPKGSTDLQAKVNASIKDIQDTGLLKKYQKEANKL 268 >gi|242279378|ref|YP_002991507.1| extracellular solute-binding protein family 3 [Desulfovibrio salexigens DSM 2638] gi|242122272|gb|ACS79968.1| extracellular solute-binding protein family 3 [Desulfovibrio salexigens DSM 2638] Length = 277 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 48/254 (18%), Positives = 93/254 (36%), Gaps = 25/254 (9%) Query: 3 KDFFVSILCLIILFFTSFSTNA----------SILGDIKKRGFLKCGINTGLVGFAEVKA 52 + V I I++ S + A S L + KR L+ G +T +A Sbjct: 5 RTVTVGITTAILIMGLSSAVWAGDARQNLSQDSTLEKVLKRETLRVGFST-FKPWAMKGK 63 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 NG++ GF++D + L+S + K++++P AL + + DI+ T R + Sbjct: 64 NGEFIGFEIDVAKRLASDMG---VKVRFIPTKWDGIIPALLTGKFDIIIGGMGITPKRNL 120 Query: 113 SLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGA--SICVQAGTTTELTLADYFKAHN 168 + F G + +K G SS++ + A + V+ GTT E ++ Sbjct: 121 KVNF--SDPYEFSGMSIVANKDVAAGKSSLADFNNAETRVSVRLGTTAEKAAKNFLPKA- 177 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 + F + L ++ L + P+ Sbjct: 178 ---KILKFNDEAASIQELLNGKAACLVASNPLPETLAKKYPG-KLYLPLQADFTSEPIGF 233 Query: 229 AIIQGDTEWYNIVS 242 A+ +GD ++ N ++ Sbjct: 234 AVRKGDPDFLNYLN 247 >gi|104779494|ref|YP_605992.1| cystine transporter subunit [Pseudomonas entomophila L48] gi|95108481|emb|CAK13175.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas entomophila L48] Length = 264 Score = 136 bits (342), Expect = 7e-30, Method: Composition-based stats. Identities = 47/244 (19%), Positives = 84/244 (34%), Gaps = 14/244 (5%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + L I+++G + G+ F+ NG GF+V+ L+ + K + Sbjct: 25 AFAGEQLKTIQEKGVINVGLEGTYPPFSFQDENGKLAGFEVELSELLAKELG---VKAKV 81 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK---GI 137 P AL+SK++D++ + R+ + P T Q I+ KK I Sbjct: 82 QPTKWDGILAALESKRLDVVINQVTISEERKKKYDFSE-PYTISGIQALILKKKAEQLNI 140 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + L+G + V GT E + +E A R R DA D Sbjct: 141 KTAQDLAGKKVGVGLGTNYEQWVKQDVPKA----EVRTYEDDPTKFADLRNGRIDAILID 196 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 L AL+ + + S+ A+ +G+ E ++ + L Sbjct: 197 R--LAALEYAQKA-KDTELAGAPFSRLESGVALRKGEPELLEALNKAIDKLKADGTLAKL 253 Query: 258 QKNI 261 + Sbjct: 254 SEKY 257 >gi|306829415|ref|ZP_07462605.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus mitis ATCC 6249] gi|304428501|gb|EFM31591.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus mitis ATCC 6249] Length = 263 Score = 136 bits (342), Expect = 7e-30, Method: Composition-based stats. Identities = 46/269 (17%), Positives = 94/269 (34%), Gaps = 16/269 (5%) Query: 1 MYKDFFVSILCLIILFF-TSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M + +L L FF T+ + A +K+G + G + V + NG Sbjct: 1 MKRKKIALVLALFFSFFLTACTQKASDPKQDNWAKYQKQGSITIGFDNTFVPMGFEEKNG 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + GFD+D +A+S + +I++ P++ + LQ+ ID + T R+ + Sbjct: 61 QYAGFDIDLAQAVSEKLG---IQIKFQPIDWDMKETELQNGTIDAIWNGYSATDERKEKV 117 Query: 115 GLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADY---FKAHNMK 170 I Y + Q ++ KK I S+ ++ ++ QAG++ L K Sbjct: 118 SFT---IPYMENQQVLVSKKSQNIHSIQDMTDKTLGAQAGSSGYLNFERQPEPLKNRVKD 174 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 ++ E + R DA D + + + + + + Sbjct: 175 QKANQYQSFNEALIDLKNDRIDALLIDRVYANYYLQSEGILNNYNVFSAGFESESFSVGV 234 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQK 259 D ++ A+ + + Sbjct: 235 RPADKTLLVALNKAFVALYKEGKFQEISQ 263 >gi|170699413|ref|ZP_02890458.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] gi|170135669|gb|EDT03952.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] Length = 266 Score = 136 bits (342), Expect = 7e-30, Method: Composition-based stats. Identities = 50/255 (19%), Positives = 99/255 (38%), Gaps = 19/255 (7%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 S A +L +K+ G LK + F A G +GFDVD +A+++ + P Q+ Sbjct: 24 SHAADLLDTVKQAGVLKIALEGTYPPFDYRNAEGQLEGFDVDVAKAVAARLGVKP---QF 80 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + LQ+ + D++ T R+ +L + + + + S+ Sbjct: 81 VTTEWSGILAGLQAGKFDVIVNQVAITPSRQQALDFSMPYVYSSAQLLQRQNDTRAFKSL 140 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 +L G + V G+ + L A +++ +P E + + A R DA D Sbjct: 141 DELKGKKVGVTMGS-NYVDLVKTVPAIDLQVYPGTPENLRD----LAAGRIDAAVNDRLM 195 Query: 201 LYALKLTND---RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 L L + RP + + + +G+ ++ + A+ + ++ G Sbjct: 196 LSYLIKNSHLPLRPGSVLAGGE----DRMGIPFRKGNPKFAKAIDD---AVASLQQDGTL 248 Query: 258 QK-NINQVSKDTTNP 271 +K ++ DTT P Sbjct: 249 KKISMQWFGTDTTRP 263 >gi|295697438|ref|YP_003590676.1| extracellular solute-binding protein family 3 [Bacillus tusciae DSM 2912] gi|295413040|gb|ADG07532.1| extracellular solute-binding protein family 3 [Bacillus tusciae DSM 2912] Length = 279 Score = 135 bits (341), Expect = 7e-30, Method: Composition-based stats. Identities = 55/283 (19%), Positives = 104/283 (36%), Gaps = 28/283 (9%) Query: 1 MYKDF----FVSILCLIILFFTSFST---------NASILGDIKKRGFLKCGINTGLVGF 47 M K F FV++ I+ S +T AS L IK+RG L G + + F Sbjct: 1 MKKFFKTALFVALAAAILAGCGSGATTTGSQAEGNKASTLEAIKQRGTLIVGSSNDV-PF 59 Query: 48 AEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 A + + KG D + + ++ + K++ + + + L +K ID+++ Sbjct: 60 AYIDKDTKQLKGIDAEIIQEIAKRLGIP--KVEMKEIKFENLLVELNNKNIDMVTDGMYI 117 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 RE Y +G+G ++ K IS + L + Q GT + + Sbjct: 118 KPEREKIAQFTH--PWYKEGEGLVVRKDSTISGLEDLKDKVVGGQKGTAFLEYIQK-MQQ 174 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS-P 225 VF E+ A + DA D + + + ++ P Sbjct: 175 QGKVKEVKVFGSQAELLLAINTDKIDAGITDSATAAYTIQHDPTLNVKLVSPYTPVFQGT 234 Query: 226 LAPAIIQGDTEWYNIVSWTH-------YAMVTAEELGITQKNI 261 +A A+ + DT+ V+ + + ++ G+ Q N+ Sbjct: 235 VAAAVRKEDTDLLEAVNKELDNLKREGFVLKVLQKYGLGQDNM 277 >gi|307727764|ref|YP_003910977.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1003] gi|307588289|gb|ADN61686.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1003] Length = 276 Score = 135 bits (341), Expect = 7e-30, Method: Composition-based stats. Identities = 42/246 (17%), Positives = 90/246 (36%), Gaps = 16/246 (6%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 S + +A L +I K G ++ G+ F + + G+D+D + A+ +K+ Sbjct: 36 SPAAHADALDNIAKTGTVRIGVFMDYPPFGSIGPDMKPMGYDIDVANLIGRAL---NAKV 92 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + + + R L + D+L + T RE + + Y+ K + Sbjct: 93 ELVQVTGDNRMAYLADHKADMLL-SVGQTPEREKVIDFSKPYAPYY--LAVFGPKALPVK 149 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT--G 196 + + L+G SI V GT +L++ + F+ +A+ + + Sbjct: 150 NAADLAGKSISVARGTLEDLSVTKIAP---PTANIKRFDDPNGAISAFISGQVQLMVVGN 206 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG- 255 D+ A + + P + + SP + + + V T + + Sbjct: 207 DVGATILARHPANDPEQ----KFSLFSSPDHVGLNKNEPRLKQKVDETIAKARSDGTMNA 262 Query: 256 ITQKNI 261 I+QK + Sbjct: 263 ISQKWL 268 >gi|210630268|ref|ZP_03296358.1| hypothetical protein COLSTE_00242 [Collinsella stercoris DSM 13279] gi|210160594|gb|EEA91565.1| hypothetical protein COLSTE_00242 [Collinsella stercoris DSM 13279] Length = 336 Score = 135 bits (341), Expect = 7e-30, Method: Composition-based stats. Identities = 46/250 (18%), Positives = 95/250 (38%), Gaps = 15/250 (6%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRAL 67 ++ + + ++ IK G ++ G+ + F+ + +G +GFD + L Sbjct: 71 LIASGAVADDATIAASTWAQKIKDAGTMRLGVVQTSMLFSLLNEKDGKLRGFDAGLSQLL 130 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 I D SK + + + R LQ+ Q+D + T R+ + A Y Q Sbjct: 131 VRYILGDESKFESTQVTSDTRESVLQNDQVDAVFATYSITEDRKKLISFA--GPYYSTQQ 188 Query: 128 GFIM-HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 ++ I + L+G ++ Q+G+T + + F+ EE +A Sbjct: 189 SILVLADNDSIEGLEDLAGKNVAAQSGSTGPSIMEELCPDA----KLQEFKTDEEARSAL 244 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAIIQGDTEWYNIVSWTH 245 R DAY D + L++ + +P ++ + + + D++ V+ Sbjct: 245 AQKRVDAYVIDRNMLFSDMM--KQPGKYKMAGEPFGPEDLYGIGMP-LDSDGVAFVNDFL 301 Query: 246 YAMVTAEELG 255 + EE G Sbjct: 302 AKI---EEDG 308 >gi|159185708|ref|NP_357248.2| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|159140842|gb|AAK90033.2| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 279 Score = 135 bits (341), Expect = 7e-30, Method: Composition-based stats. Identities = 53/257 (20%), Positives = 91/257 (35%), Gaps = 17/257 (6%) Query: 9 ILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWK-GFDVDFCRA 66 I +++ + + +A L IK RG L G+ F + + G ++D +A Sbjct: 13 IAGTVVIASMATAAHADATLDRIKGRGKLTVGVILSGAPFGFIDPKTQEQKGLNIDVAKA 72 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L++ + D + R LQ ++DIL N +T R +L P +D Sbjct: 73 LAAGLGVDLVT---ETVTPPNRVQFLQQGKVDILIANMQYTEERAKTLDYVPTP---YDR 126 Query: 127 QGFIM--HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 QG K GI S L G CV G+ L + + A E Sbjct: 127 QGGAAIGRKDSGIKDWSDLKGKIACVSQGSNYTQPLIEQYGAQ-----VKALPSQPESLL 181 Query: 185 AYRAHRCDAYTGDISAL-YALKLTNDRPSEHVIL-PDIISKSPLAPAIIQGDTEWYNIVS 242 A + CD L L+ D ++ IL P + S + +G+ + + Sbjct: 182 ALKGGNCDVSVHVNGTLSLMLQDRADEWKDYGILIPTDLIPSDSVIWLRKGEADTQAALD 241 Query: 243 WTHYAMVTAEELGITQK 259 + + ++ K Sbjct: 242 KIVKDLHASGKMIEFAK 258 >gi|323529956|ref|YP_004232108.1| family 3 extracellular solute-binding protein [Burkholderia sp. CCGE1001] gi|323386958|gb|ADX59048.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1001] Length = 273 Score = 135 bits (341), Expect = 8e-30, Method: Composition-based stats. Identities = 42/251 (16%), Positives = 92/251 (36%), Gaps = 16/251 (6%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 L S + +A L +I K G ++ G+ F + + G+D+D + A+ Sbjct: 28 ALTAFSPAAHADALDNIAKTGTVRIGVFMDYPPFGSIGPDMKPMGYDIDVANLIGKAL-- 85 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 +K++ + + R L + D+L + T RE + + Y+ K Sbjct: 86 -NAKVELVQVTGDNRMAYLADHKADMLL-SVGQTPEREKVIDFSQPYAPYY--LAVFGPK 141 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 + + + L+G SI V GT +L+++ + F+ +A+ + + Sbjct: 142 ALTVKNAADLAGKSISVARGTLEDLSVSKIAP---PTANIKRFDDPNGAISAFISGQVQL 198 Query: 194 YT--GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 D+ A + + P + + SP + + + + T + Sbjct: 199 MVVGNDVGATILARHPANDPEQ----KFSLFSSPDHVGLNKNEPRLKQKIDETIARARSD 254 Query: 252 EELG-ITQKNI 261 + I+QK + Sbjct: 255 GTMNAISQKWL 265 >gi|302387425|ref|YP_003823247.1| extracellular solute-binding protein family 3 [Clostridium saccharolyticum WM1] gi|302198053|gb|ADL05624.1| extracellular solute-binding protein family 3 [Clostridium saccharolyticum WM1] Length = 257 Score = 135 bits (341), Expect = 8e-30, Method: Composition-based stats. Identities = 44/260 (16%), Positives = 84/260 (32%), Gaps = 20/260 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI------LGDIKKRGFLKCGINTGLVGFAEVKANG 54 M K+ + + F + + + G L N + N Sbjct: 1 MKKNVIAIAGVICMAAFLTACAGSGTKTETTAADQKEAAGKLVMVTNAEFPPYEYHD-NN 59 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G D D +A++ + + ++ + A+QS + D + R+ ++ Sbjct: 60 QIVGIDADIAKAIADKMGVE---LEIQDMAFDSLIPAVQSGKADFAAAGMTVNEDRKKNV 116 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 Q I+ + I + L+G I VQ GTT ++ D A Sbjct: 117 DF--TDTYAEAAQVIIVKEGSQIKTPDDLAGKKIGVQTGTTGDIYADDIENA-----DIQ 169 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 F + E A + DA D N VIL + ++ A A+ + + Sbjct: 170 RFNKGMEAVMALSQDKIDAVIIDREPAKVFVKENAG---LVILDEAFTEEEYAIAVKKDN 226 Query: 235 TEWYNIVSWTHYAMVTAEEL 254 E + ++ + + EL Sbjct: 227 KELLDKMNGAIKELKESGEL 246 >gi|318060368|ref|ZP_07979091.1| sugar-binding protein [Streptomyces sp. SA3_actG] Length = 375 Score = 135 bits (341), Expect = 8e-30, Method: Composition-based stats. Identities = 44/265 (16%), Positives = 82/265 (30%), Gaps = 26/265 (9%) Query: 33 RGFLKCGINTGLVGFAEV----KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 RG L G++ + N D +GFD+D A++ + DP + + R Sbjct: 120 RGKLVVGVDQNSYRWGFRNPQRDGNNDIEGFDIDLAHAIAKDLLGDPDALVLRAIPTNRR 179 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV-SQLSGAS 147 A+ +D++ R T R + + Q I+ + + + L+G Sbjct: 180 VQAVADHDVDMVVRTMTITCRRLKDVSF--STPYFRTTQRIIVPRGSSVDGFNASLTGKR 237 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 +C +T E L + FK K + + + DA D + Sbjct: 238 LCSADSSTAENVLTEGFK---DKVELVSVPNQLDCLVRLQLGEVDALVTDGALGEGQLAQ 294 Query: 208 ND-----------RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 + P++ D + A+ Q + V+ + Sbjct: 295 DPSLDMQGGPDENNPADR----DSPAWEYYGIAMNQDSPQLVARVNKILEDFRADQWQAT 350 Query: 257 TQKNINQVSK-DTTNPDVQRFLGID 280 K K + DV+ LG Sbjct: 351 YTKWFGAGEKVEPPKADVKINLGTP 375 >gi|218548332|ref|YP_002382123.1| glutamine ABC transporter periplasmic protein [Escherichia fergusonii ATCC 35469] gi|218355873|emb|CAQ88488.1| glutamine transporter subunit ; periplasmic binding component of ABC superfamily [Escherichia fergusonii ATCC 35469] gi|324112750|gb|EGC06726.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia fergusonii B253] Length = 248 Score = 135 bits (341), Expect = 8e-30, Method: Composition-based stats. Identities = 53/267 (19%), Positives = 91/267 (34%), Gaps = 23/267 (8%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K F L + L F S A L +T V F + + + GFDV Sbjct: 1 MKSVFKVSLAALTLAFAVSSHAADK--------KLVVATDTAFVPFEFKQGD-KYVGFDV 51 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D A++ + D + P++ ALQ+K +D+ T R+ ++ + Sbjct: 52 DLWAAIAKELKLD---YELKPMDFSGIIPALQTKNVDLALAGITITDERKKAIDFSDG-- 106 Query: 122 TYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G ++ + SV L G + V++GT + DY KA+ F ++ Sbjct: 107 YYKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNID 162 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +R DA D + T + + D + A +G E + Sbjct: 163 NAYMELGTNRADAVLHDTPNILYFIKTAGN-GQFKAVGDSLEAQQYGIAFPKGSDELRDK 221 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKD 267 V+ T E G + + Sbjct: 222 VNGALK---TLRENGTYNEIYKKWFGT 245 >gi|302337866|ref|YP_003803072.1| extracellular solute-binding protein family 3 [Spirochaeta smaragdinae DSM 11293] gi|301635051|gb|ADK80478.1| extracellular solute-binding protein family 3 [Spirochaeta smaragdinae DSM 11293] Length = 282 Score = 135 bits (341), Expect = 8e-30, Method: Composition-based stats. Identities = 50/290 (17%), Positives = 90/290 (31%), Gaps = 32/290 (11%) Query: 2 YKDFFVSILCLIILFFTSFSTNA------------SILGDIKKRGFLKCGINTGLVGFAE 49 K + L +I+ +N L I K G L + Sbjct: 8 KKSIILLALVMILSLLVGACSNGGQSAANATKVQEDALQKILKSGKLVIATDLTGPPVQY 67 Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 A G G V+ + + + I++ + + +L + ++D+++ N +L Sbjct: 68 KDAEGKPAGLIVELMELAAKELGVE---IEWQDMAWESLIPSLTAGKVDMIAANMSMSLS 124 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAH 167 R ++ F G ++ K GI +L G + G++ L + Sbjct: 125 RAKAIRF--SDPYMFTGVYAMVRKDSGIRDWEELLEPGKILAATMGSSHATYLKE----- 177 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 N Y P +E + + R D D L N E + + + Sbjct: 178 NYNYEPKQYESSTDFINELKNGRIDGVMDDELLLLEFCKQNP---EFTLTANPVRPDVYG 234 Query: 228 PAIIQ--GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD-TTNPDVQ 274 A Q + + +W G K V KD T NP +Q Sbjct: 235 LAFTQGNQNDTLVDWFNWFLKWEKLNGNYGTIYKKF--VGKDWTPNPVIQ 282 >gi|2599566|gb|AAB84169.1| hypothetical protein [Rhodospirillum rubrum] Length = 167 Score = 135 bits (341), Expect = 8e-30, Method: Composition-based stats. Identities = 28/150 (18%), Positives = 55/150 (36%), Gaps = 6/150 (4%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD---- 73 S L IK+ G + G + F+ + N G+ +D C + A+ Sbjct: 20 ASAEELTGTLKKIKETGEIAIGHRDSSIPFSYLDDNQKPIGYAMDICAHVVEAVKAELKL 79 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 D ++ P+ + R + + +D+ +T L R+ + F+ K Sbjct: 80 DTLAVKLTPVTSATRIPLIANGTVDLECGSTTNNLDRQQQASFTNS--HFLTASRFVSKK 137 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADY 163 + S+ L G ++ AGTT + + Sbjct: 138 TSNLKSIDDLKGKTVVSTAGTTNIKQVNEL 167 >gi|238927182|ref|ZP_04658942.1| extracellular solute-binding protein [Selenomonas flueggei ATCC 43531] gi|304437127|ref|ZP_07397089.1| ABC superfamily ATP binding cassette transporter, binding protein [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|238884964|gb|EEQ48602.1| extracellular solute-binding protein [Selenomonas flueggei ATCC 43531] gi|304369886|gb|EFM23549.1| ABC superfamily ATP binding cassette transporter, binding protein [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 256 Score = 135 bits (341), Expect = 8e-30, Method: Composition-based stats. Identities = 46/264 (17%), Positives = 80/264 (30%), Gaps = 17/264 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59 + K V L+ L K+ L+ G + F ++GF Sbjct: 3 LKKLALVLTGALVSLSLLGCGAGG---DQAKQASKLRVGASIDFAPFEFQDEGQKDYQGF 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D RA++ + + + + ALQ+K ID++ R+ + Sbjct: 60 DMDLIRAVAKEMGSEA---EIQNIGFDGLIPALQAKNIDVIISGMTINDERKEKVAF--S 114 Query: 120 PITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y G ++ + I S S L G + Q GTT + Sbjct: 115 DPYYQSGLTMVVRSDEENIKSFSDLKGHKVAAQIGTTGAKMAKEM-----EGVTVSELNT 169 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + +A DA D + L D +S A+ + +TE Sbjct: 170 PADCFMELKAGGVDAVINDRPVNDYYINQSQATG-VKTLADRLSAEDYGIAMAKDNTELQ 228 Query: 239 NIVSWTHYAMVTAEEL-GITQKNI 261 ++ + E I QK Sbjct: 229 QKINAALKKLHDNGEYDKIYQKWF 252 >gi|325272375|ref|ZP_08138773.1| cystine transporter subunit [Pseudomonas sp. TJI-51] gi|324102500|gb|EGB99948.1| cystine transporter subunit [Pseudomonas sp. TJI-51] Length = 264 Score = 135 bits (341), Expect = 8e-30, Method: Composition-based stats. Identities = 48/246 (19%), Positives = 84/246 (34%), Gaps = 14/246 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 + L I+++G + G+ F+ NG GF+V+ L+ + K Sbjct: 23 CQAFAGEELKTIQEKGVINVGLEGTYPPFSFQDENGKLTGFEVELSELLAKELG---VKA 79 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--- 135 + P AL+SK++DI+ + R+ + P T Q I+ KK Sbjct: 80 KIQPTKWDGILAALESKRLDIVVNQVTISEERKKKYDFSE-PYTISGIQALILKKKAEQL 138 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I+ L+G + V GT E + +E A R R DA Sbjct: 139 NINGAQDLAGKKVGVGLGTNYEQWVKQDVPKA----EVRTYEDDPSKFADLRNGRIDAIL 194 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D L AL+ + + S+ A+ +G+ E ++ + L Sbjct: 195 IDR--LAALEYAQKA-KDTELAGPAFSRLESGVALRKGEPELLAAINKAIDKLKADGTLA 251 Query: 256 ITQKNI 261 + Sbjct: 252 KLSEKY 257 >gi|194288893|ref|YP_002004800.1| cysteine ABC transporter periplasmic protein [Cupriavidus taiwanensis LMG 19424] gi|193222728|emb|CAQ68731.1| cysteine ABC transporter, periplasmic binding component [Cupriavidus taiwanensis LMG 19424] Length = 273 Score = 135 bits (341), Expect = 8e-30, Method: Composition-based stats. Identities = 53/272 (19%), Positives = 95/272 (34%), Gaps = 15/272 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 +K + L + + A +L +K+ G LK G+ F A + +GFDV Sbjct: 9 FKSLLAASLVAGAGLAATAAHAADLLDTVKQAGVLKIGLEGTYPPFGFRGAKNELEGFDV 68 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D RA++ + P +++ LQ+ + D++ + T R+ L + P Sbjct: 69 DVARAVAGKLGVKP---EFVTTEWSGIIAGLQAGKFDVIVNQVNVTPQRQQVLDFS-TPY 124 Query: 122 TYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y D Q K S+ L G + V G+ D K+ + Sbjct: 125 VYSDAQLIQRKDDKRQFKSLEDLKGHKLGVSLGS----NYNDLAKS-VAGIDVKTYPGAP 179 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSE-HVILPDIISKSPLAPAIIQGDTEWYN 239 E A R DA D + L T + P I+ ++ +A + + ++ Sbjct: 180 EYLRDLAAQRVDAALNDRLMVAYLVKTTNLPLRPGAIVAGATTQ--VAIPFRKDNPKFAQ 237 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 ++ + LG + D T P Sbjct: 238 AINHALDELAKDGTLGKLS--VKWFGTDVTKP 267 >gi|300716010|ref|YP_003740813.1| Glutamine high-affinity transporter [Erwinia billingiae Eb661] gi|299061846|emb|CAX58962.1| Glutamine high-affinity transporter [Erwinia billingiae Eb661] Length = 248 Score = 135 bits (341), Expect = 8e-30, Method: Composition-based stats. Identities = 56/269 (20%), Positives = 92/269 (34%), Gaps = 27/269 (10%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K L + L F ST A L +T V F + N ++ GFDV Sbjct: 1 MKSIVKFSLAALTLAFAVSSTAAEK--------KLVVATDTAFVPFEFKQGN-EYVGFDV 51 Query: 62 DFCRALSSAIFDDPSKIQYL--PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D A++ + I+Y P++ ALQ++ ID+ T RE ++ + Sbjct: 52 DLWAAIAKQL-----NIEYTLKPMDFSGIIPALQTRNIDLALAGITITPEREKAIEFSDG 106 Query: 120 PITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y G ++ I S++ L G + V++GT + DY K H F Sbjct: 107 --YYKSGLLVMVKANNDKIKSIADLDGKVVAVKSGTGSV----DYAKEHIKSKELHQFPN 160 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 ++ +R DA D + T + + + + IS A +G E Sbjct: 161 IDNAYMELGTNRADAVLHDTPNILYFINTAGK-GQFKAVGESISAQQYGIAFPKGSDELR 219 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKD 267 V+ E G + Sbjct: 220 EKVNGALK---VLRENGTYNTLYKKWFGS 245 >gi|255994764|ref|ZP_05427899.1| amino acid ABC transporter, amino acid-binding protein [Eubacterium saphenum ATCC 49989] gi|255993477|gb|EEU03566.1| amino acid ABC transporter, amino acid-binding protein [Eubacterium saphenum ATCC 49989] Length = 277 Score = 135 bits (341), Expect = 9e-30, Method: Composition-based stats. Identities = 52/272 (19%), Positives = 99/272 (36%), Gaps = 21/272 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG--------FLKCGINTGLVGFAEVKA 52 M + ++++ IIL + + KK G L G++ Sbjct: 6 MKR--ILTVVMAIILAVSVVGLAGCKKEEEKKDGGLGNAKEGKLVVGLDDTFAPMGFRDK 63 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 GFD+D ++ + ++++ P+ K + L L+SK+ID + T RE Sbjct: 64 KNKLVGFDIDLATEVAKQM---KLEVEFKPIQWKAKDLELKSKKIDCVWNGMSVTPEREK 120 Query: 113 SLGLAFRPITYFDG--QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 ++ L+ + Y D + K I S L +I Q + L A N Sbjct: 121 AMSLSNK---YLDNKIILMTSNNKVNIKSAKDLEKYNIGTQEDSAGLEMLKAQKNAKNFM 177 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 + ++ A ++ R D D L A K N + + I + + A Sbjct: 178 KKVKEYPTYDDAINALKSGRVDVIAIDQ-VLGAYKNKNLK-EKLAICKYALGQDAYAIGF 235 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELG-ITQKNI 261 + DT + V+ + A++ + I++K Sbjct: 236 RKEDTALRDKVNESIKAIIDNGKAKEISEKWF 267 >gi|284048019|ref|YP_003398358.1| extracellular solute-binding protein family 3 [Acidaminococcus fermentans DSM 20731] gi|283952240|gb|ADB47043.1| extracellular solute-binding protein family 3 [Acidaminococcus fermentans DSM 20731] Length = 259 Score = 135 bits (341), Expect = 9e-30, Method: Composition-based stats. Identities = 46/271 (16%), Positives = 81/271 (29%), Gaps = 17/271 (6%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFD 60 K + L L + K++ +K G F + + GFD Sbjct: 1 MKKISAVMCVLAALMLAVAGCGSDTKQAAKEQKVIKVGTEPTFAPFEFQEKGSKEFTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D RA+ + K++ + AL S ID+ + T R+ ++ Sbjct: 61 MDLARAIGKKLGK---KVEIQNMGFDALIPALNSGNIDVAAAGMSITDERKKAVTF--SD 115 Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G ++ K G+ S+ L G I VQ GTT A F Sbjct: 116 PYYTSGLVVVVTKDNDGVKSIKDLEGKKIAVQIGTTGADKAGKVPGA-----KVTSFNTN 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E+ DA D + + + I+ D + A + + Sbjct: 171 AEVFLELENKGVDAVIIDKPVAQYYLIKEGKDKD-KIVGDTMDAESYGFAFKKDSKLAAD 229 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 + A+ ++ G K + Sbjct: 230 F----NKALAELKKDGEYDKIYTKWFGKDAK 256 >gi|150391393|ref|YP_001321442.1| extracellular solute-binding protein [Alkaliphilus metalliredigens QYMF] gi|149951255|gb|ABR49783.1| extracellular solute-binding protein, family 3 [Alkaliphilus metalliredigens QYMF] Length = 280 Score = 135 bits (341), Expect = 9e-30, Method: Composition-based stats. Identities = 50/289 (17%), Positives = 95/289 (32%), Gaps = 36/289 (12%) Query: 1 MYKDFFVSILCLIILFFTSFSTN----------------------ASILGDIKKRGFLKC 38 M K L +++LF + L DI RG L Sbjct: 1 MMKKLGTVFLIMMLLFMVGCAGENVEPVETDPDMDSDANVEIDVDGGTLEDINARGSLTF 60 Query: 39 GINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQID 98 + F + +G GFD+D A++ + + + + + L S + D Sbjct: 61 AMTGAYPPFNFIDTDGQLIGFDIDIANAIAEKMGVEA---EPMTVLWDGIISGLTSGRFD 117 Query: 99 ILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTEL 158 ++ + T R + Y+DG F ++ + +SQ+ A++ V GTT + Sbjct: 118 MIIGSMAITDERLERVNF--STPYYYDGAQFFGSEELEENDLSQIEDAAVGVVTGTTFQD 175 Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218 L D + + FE + A + R D L L + Sbjct: 176 FLVDMENVTD----ILQFESDVDNMRAVQQGRSDGLIT--GLLVGLHGIESFDMPLKPVG 229 Query: 219 DIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 + + + AI + DT+ + V+ ++ + G + N Sbjct: 230 EPLYIEEIGIAIRKDDTDLLDAVNDALQEII---QDGTYAEISNTWFGT 275 >gi|226323072|ref|ZP_03798590.1| hypothetical protein COPCOM_00844 [Coprococcus comes ATCC 27758] gi|225208639|gb|EEG90993.1| hypothetical protein COPCOM_00844 [Coprococcus comes ATCC 27758] Length = 257 Score = 135 bits (341), Expect = 9e-30, Method: Composition-based stats. Identities = 54/271 (19%), Positives = 92/271 (33%), Gaps = 20/271 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG----FLKCGINTGLVGFAEVKANGDW 56 M K V + C + F + + + + L N F + + Sbjct: 3 MKKVISVVLACACVFSFAACGSKSDSSKSDSAKSDKKEKLVMATNAEFPPFEYYDGD-EV 61 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G D +F A++ + D ++ + A+QS + DI + T R + Sbjct: 62 VGIDAEFAAAIADKLGMD---LKIEDMAFDSIIPAVQSGKADIGAAGMTVTEDRATQVDF 118 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + Y Q I+ I+ L G I VQ GTT ++ D F N F Sbjct: 119 SDS--YYTGVQVIIVTDDSDITEPDDLKGKKIGVQQGTTGDIYSTDDFGDDN----VERF 172 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + E A + + DA D N+ IL + A AI +G+ Sbjct: 173 NKGMEAVQALQQGKIDAVIIDNQPAKTFVEENEG---LKILETSYVEEDYALAIKKGND- 228 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 ++V + A+ +E G K + + D Sbjct: 229 --DLVKKVNDAIKELKEDGTFDKIVAKYITD 257 >gi|255066533|ref|ZP_05318388.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria sicca ATCC 29256] gi|255049117|gb|EET44581.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria sicca ATCC 29256] Length = 280 Score = 135 bits (341), Expect = 9e-30, Method: Composition-based stats. Identities = 45/233 (19%), Positives = 83/233 (35%), Gaps = 10/233 (4%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K + N F + + G+ +GFDVD A++ A K+++ F Sbjct: 34 KADKVYRVAANAEFAPFESLDSAGNVEGFDVDLMNAMAKA---GGFKVEFKHQPWDSLFP 90 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG-ASIC 149 AL++ DI+ T R+ S+ + Q ++ K K ++S L A + Sbjct: 91 ALKNGDTDIVISGVTITDERKQSMDF--TDPYFEITQVVLVPKGKKVASSDDLKNMAKVG 148 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V G T + +++ N FE V + DA D + + N Sbjct: 149 VVTGQTGDFSVSKLLG--NDNPKIARFESVPLVIKELENGGVDAVVSDSAVIANYVKNNP 206 Query: 210 RPS-EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 S + + LPD + A+ +GD +++ + + E Sbjct: 207 TKSMDFITLPD-FTIENYGIAVRKGDEATVKMLNEALKKVRDSGEYDKIHAKY 258 >gi|303229869|ref|ZP_07316645.1| bacterial extracellular solute-binding protein, family 3 [Veillonella atypica ACS-134-V-Col7a] gi|303232048|ref|ZP_07318751.1| bacterial extracellular solute-binding protein, family 3 [Veillonella atypica ACS-049-V-Sch6] gi|302513154|gb|EFL55193.1| bacterial extracellular solute-binding protein, family 3 [Veillonella atypica ACS-049-V-Sch6] gi|302515425|gb|EFL57391.1| bacterial extracellular solute-binding protein, family 3 [Veillonella atypica ACS-134-V-Col7a] Length = 269 Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats. Identities = 52/264 (19%), Positives = 84/264 (31%), Gaps = 18/264 (6%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFD 60 K S++ ++ ++S KK L G N V F + GFD Sbjct: 7 KKLVLGSLMVVMAASLVGGCGSSSTTTSNKK---LIVGTNATFVPFEFKDDKTQDYAGFD 63 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D RA+ I D ++ + AL + ID+ + T R + Sbjct: 64 IDLIRAIGKRINKD---VELKNVAFDALIPALNTHDIDVAASGMTITKARSEKVLF--SS 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + + I S+ L I Q GTT F+ Sbjct: 119 PYYENALAIVYKDSNSIHSLDDLKNKKIAAQMGTTGSDLAHKI-----EGTSVKEFDHSN 173 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV-ILPDIISKSPLAPAIIQGDTEWYN 239 E + DA D+ A + P EH+ ILP +K L A+ + + Sbjct: 174 EALLELQNGGVDATVIDLPV--AQYYSTKHPDEHIQILPYPNTKEYLGLALNKDNKALQE 231 Query: 240 IVSWTHYAMVTAEELG-ITQKNIN 262 ++ M E + +K N Sbjct: 232 EINKAIADMKADGEFNTLYKKWFN 255 >gi|226310676|ref|YP_002770570.1| amino acid ABC transporter substrate binding protein [Brevibacillus brevis NBRC 100599] gi|226093624|dbj|BAH42066.1| amino acid ABC transporter substrate binding protein [Brevibacillus brevis NBRC 100599] Length = 258 Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats. Identities = 41/267 (15%), Positives = 90/267 (33%), Gaps = 14/267 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++S+L ++ ++A D L GI+ + GFD Sbjct: 1 MKKIAWMSLLLGAVVSLVVGCSSAKTGAD---ANKLIIGIDDKFAPMGFRDEKNELVGFD 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D+ RA + ++++ ++ + L S +ID++ T R+ + Sbjct: 58 IDYARAAGEKMGK---QVEFQTIDWSAKESELNSGRIDLIWNGYTITDERKGKVLF--TK 112 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Q + ++ +S L+G +I +Q ++ + + + N F Sbjct: 113 PYLKNAQVVVTKANSNLTKLSDLAGKAIGLQKLSSAADAI-NASEIKNQVQSITEFPDNV 171 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + + R +A D A P L + +S + +G+ Sbjct: 172 LALSDLKIGRVEAVVIDQIV--ADYYMAKEPGAFKQLEESLSPEEYGIGVKKGNEALQKE 229 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKD 267 + AM + G K + + Sbjct: 230 LQKALDAM---NQDGTAAKISEKWFGE 253 >gi|315652085|ref|ZP_07905086.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Eubacterium saburreum DSM 3986] gi|315485732|gb|EFU76113.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Eubacterium saburreum DSM 3986] Length = 282 Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats. Identities = 51/288 (17%), Positives = 93/288 (32%), Gaps = 28/288 (9%) Query: 1 MYKDFFVSILCLIILFFTSFS-----TNASILGDIKKRG--------------FLKCGIN 41 M K + + +L I+L S + ++AS I + G + Sbjct: 1 MKKIYLLGVLATIMLVGCSSAKTIESSSASTDTSIAESKLTDETSIAGTDANKTFTVGFD 60 Query: 42 TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101 V +G++ GFD+D ++ + + I+Y P+ + + L S ID + Sbjct: 61 QDFPPMGFVGDDGEFTGFDLDLAAEVAKRLGKE---IKYQPIAWDAKDMELTSGNIDCIW 117 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 T RE + + Q F++ I+S L+G ++ VQ ++ E L Sbjct: 118 NGFS-TQNREDK--YTWTKPYMKNDQVFVVRSDSDINSFVDLAGKTVEVQTDSSAEAVLK 174 Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221 + + DA S + ++T +L + Sbjct: 175 ENTELSGTFGKLQTVADFNTGFMDLEMGGVDALAM-NSVVANYQITKRGGKGFKVLDKPL 233 Query: 222 SKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 S A G+T + V M L + KD T Sbjct: 234 SSEEYAVGFKLGNTILRDEVQTALEEMKADGTLKSISE--KWFGKDVT 279 >gi|124265324|ref|YP_001019328.1| glutamine transport system substrate-binding protein [Methylibium petroleiphilum PM1] gi|124258099|gb|ABM93093.1| glutamine transport system substrate-binding protein [Methylibium petroleiphilum PM1] Length = 285 Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats. Identities = 37/232 (15%), Positives = 75/232 (32%), Gaps = 14/232 (6%) Query: 37 KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96 G + F G+ GF +D +A+++ +++++ + F ALQ Sbjct: 56 VVGTDAAYAPFEFQNEKGEIVGFSIDLLQAVAAK---GGFEVKFVNTPWEGIFNALQQGD 112 Query: 97 IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT 156 D+L + T R+ ++ + Q + ++ L + VQ GTT Sbjct: 113 RDLLISSITITDERKQTMDF--SNPYFDAFQLIAVKATSKVAKFDDLKKLKVGVQTGTTG 170 Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216 + + ++ FE A DA D + N + + Sbjct: 171 DEVVTKLQGKNSANVK--RFESTPLALKELEAGGVDAVVADNGVIINYVTNNAGANFKTV 228 Query: 217 LPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 + A+ +G+ E V+ A+ + +QV T Sbjct: 229 SDSAFAPEQYGIAVKKGNAELLEKVNKGIAAIKADG-------SYDQVYAKT 273 >gi|241759765|ref|ZP_04757865.1| histidine-binding periplasmic protein [Neisseria flavescens SK114] gi|241319773|gb|EER56169.1| histidine-binding periplasmic protein [Neisseria flavescens SK114] Length = 267 Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 96/280 (34%), Gaps = 23/280 (8%) Query: 3 KDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 K + + L L T+ +A + + G N F + + G + Sbjct: 4 KKWLATALACSALALTACGGQSNNASAPT-DKV-----YRVGSNAEFAPFESLDSAGKVE 57 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD A++ A K+++ + F +L + +DI+ T R+ S+ Sbjct: 58 GFDVDLMNAMAKA---GNFKVEFKHQPWESLFPSLNNGDVDIVMSGVTITDDRKQSMLF- 113 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSG-ASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + Q ++ K K ++S L A + V G T + +++ N F Sbjct: 114 -SDPYFEITQVVLVPKGKKVASSEDLKNMAKVGVVTGYTGDFSVSKLLG--NDNPKIARF 170 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS-EHVILPDIISKSPLAPAIIQGDT 235 E V I D+ D + + N + + LPD + A +GD Sbjct: 171 ESVPLIIKELENGGLDSVVSDSAVIANYVKNNPTKGLDFISLPD-FTIENYGIAARKGDE 229 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 +++ + + E +K+ + + Sbjct: 230 ATIKMLNDALKKVRESGEYDKIYAKY--FAKEGEKAETAK 267 >gi|295100979|emb|CBK98524.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Faecalibacterium prausnitzii L2-6] Length = 300 Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats. Identities = 44/244 (18%), Positives = 78/244 (31%), Gaps = 30/244 (12%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 I RG LK G+ + GF+ G++KG + ++ + D +++ + A Sbjct: 56 QAIVDRGVLKVGVKNAVKGFSFQDTLTGEYKGLEDSLAEMIAEHLGVD---VEFTTVTAA 112 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 R L S ID + T R+ + Y D ++ GI ++ L Sbjct: 113 TRGELLDSSDIDAVLATFTITEERKKTWDF--STPYYTDYVSVLVEDSTGIKGLADLKDK 170 Query: 147 SICVQAGTTTELTL----------------ADYFKAHNMK--YHPIVFERVEEIDAAYRA 188 + V +G+T+ L AD F A K ++ I A A Sbjct: 171 VVGVSSGSTSARALVKAMIDEGVLDGASFDADTFNADTWKDGVSFRQYDDYPAISTALSA 230 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 + D S L K + S A +G +++ + Sbjct: 231 GEVQGFCVDKSILAIYKTEGRSY-----IDAEFSPQEYGVATKKG-SDFSTLCDDLVKGW 284 Query: 249 VTAE 252 + Sbjct: 285 LADG 288 >gi|295694799|ref|YP_003588037.1| extracellular solute-binding protein family 3 [Bacillus tusciae DSM 2912] gi|295410401|gb|ADG04893.1| extracellular solute-binding protein family 3 [Bacillus tusciae DSM 2912] Length = 265 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 45/243 (18%), Positives = 90/243 (37%), Gaps = 19/243 (7%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L G +T F E + NG GFD+D +A++ + ++ ++ + ALQ+ Sbjct: 40 TLHVGADTTFPPF-ETEKNGQVTGFDIDLIKAIAQK---ENMQVDLKTMDFQGLIPALQT 95 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAG 153 ID+ T R+ S+ Y G ++ K I+ L+G ++ V+ G Sbjct: 96 GDIDVAVAGITITDDRKKSVNF--SDPYYHSGLSILVKKDNTTINVPDDLTGKTVAVKLG 153 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA-LYALKLTNDRPS 212 TT AD + + F + + + + DA D L ++ +D Sbjct: 154 TT-----ADLMFSKKPGVNVKRFTNISDAYSELQNGGADAVVFDNPVNLNYIRTGHDN-- 206 Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272 I+ +++ A+ + + ++ ++ G K Q D N Sbjct: 207 -VKIVGPLLTGEDYGIAVRKNAPDLLQKINDGLKQVMA---DGTYDKLYQQYFGDEPNGK 262 Query: 273 VQR 275 ++ Sbjct: 263 IKH 265 >gi|295676371|ref|YP_003604895.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] gi|295436214|gb|ADG15384.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] Length = 264 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 52/263 (19%), Positives = 100/263 (38%), Gaps = 19/263 (7%) Query: 13 IILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI 71 I ++ + +A +L +K+RG L+ G+ F +G+ G+DVD +A+++ + Sbjct: 15 IGASLSAVAAHAEDLLDQVKQRGTLRVGLEGTFPPFNSKAPSGELVGYDVDIAKAVAAKL 74 Query: 72 FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131 P ++ LQ+ + D++ T R+ +L P + I Sbjct: 75 GVKPV---FVTTEWSGIIAGLQAGKFDVIVNQVGITDARKQTLDF--SPAYTYSAAQLIQ 129 Query: 132 HKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 K +S+ L G + V G T + +A ++K +P E A Sbjct: 130 RKDDTRQFTSLEDLKGKKLGVGLG-TNYMDMAKSVPGIDVKTYPGA----PEYLRDLAAG 184 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 R DA D L L ++ P ++ + +P +G+ ++ + AM Sbjct: 185 RLDAALNDRLMLAYLLKNSNLP--LRTGANVGTGNPSGIPFKKGNPKFAQAID---EAMT 239 Query: 250 TAEELGITQKNINQVSK-DTTNP 271 E G K ++ D + P Sbjct: 240 QLEADGTFTKISDKWFGIDVSKP 262 >gi|322832079|ref|YP_004212106.1| cationic amino acid ABC transporter periplasmic binding protein [Rahnella sp. Y9602] gi|321167280|gb|ADW72979.1| cationic amino acid ABC transporter, periplasmic binding protein [Rahnella sp. Y9602] Length = 247 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 51/265 (19%), Positives = 93/265 (35%), Gaps = 24/265 (9%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K L + L F S A L +T V F + + + GFD+ Sbjct: 1 MKSLLKVSLAALTLAFAVSSHAADK--------KLIVATDTAFVPFEFKQGD-KYVGFDI 51 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D A++ + + P++ ALQ+ ID+ T R+ ++ + Sbjct: 52 DLWDAVAKEMKVS---YELKPMDFGGIIPALQTHNIDLALAGITITPERKKAIDFSDG-- 106 Query: 122 TYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G ++ I SV+ L G ++ V++GT++ DY KA+ F ++ Sbjct: 107 YYNSGLMVMVKSNNDAIKSVADLKGKTVAVKSGTSSV----DYMKANVQTKDLRQFPNID 162 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 R DA D + T + + + D ++ A QG ++ Sbjct: 163 SAYMELGTGRADAVMHDTPNILYFIKTAGK-GQFKAVGDSLAGQQYGIAFPQGS----DL 217 Query: 241 VSWTHYAMVTAEELGITQKNINQVS 265 + A+ T +E G + Sbjct: 218 REKANAALKTIKENGTYAAIYKKWF 242 >gi|227513106|ref|ZP_03943155.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus buchneri ATCC 11577] gi|227083681|gb|EEI18993.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus buchneri ATCC 11577] Length = 283 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 44/285 (15%), Positives = 94/285 (32%), Gaps = 18/285 (6%) Query: 2 YKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 K V + L+++ + TN + K+ + G++ V + Sbjct: 6 KKCPLVIVTLLLMVVLSGCRFESRQKMETNPDTWSIVSKQKKIVIGLDDSFVPMGFETKS 65 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G G+DVD +A+ K+ + P++ L++ ID++ R Sbjct: 66 GKIVGYDVDLAKAVFKQYG---IKVDFQPIDWSMNVTELRNGTIDLIWNGFSMNPQRAKK 122 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMK 170 + + + Q I KK I+S + + VQAG+ + + K Sbjct: 123 VTFSE--PYLVNKQVLISKKKNHINSFADMKNRVAGVQAGSAGAMDIDSQPKLLKDRIKN 180 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 + PI+++ E + R D + + +P K + Sbjct: 181 HTPILYDSFTEAFIDLNSDRIQGLLIDSIYAGYYIGHQKDRATYQSVPSQFPKEYYGVGM 240 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 +GDT+ + + +L K + +P +++ Sbjct: 241 RKGDTKLKQKIDAGLNRLAKDGQLAKINK--KWFGTNAYSPLMKK 283 >gi|318081102|ref|ZP_07988434.1| sugar-binding protein [Streptomyces sp. SA3_actF] Length = 346 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 44/265 (16%), Positives = 82/265 (30%), Gaps = 26/265 (9%) Query: 33 RGFLKCGINTGLVGFAEV----KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 RG L G++ + N D +GFD+D A++ + DP + + R Sbjct: 91 RGKLVVGVDQNSYRWGFRNPQRDGNNDIEGFDIDLAHAIAKDLLGDPDALVLRAIPTNRR 150 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV-SQLSGAS 147 A+ +D++ R T R + + Q I+ + + + L+G Sbjct: 151 VQAVADHDVDMVVRTMTITCRRLKDVSF--STPYFRTTQRIIVPRGSSVDGFNASLTGKR 208 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 +C +T E L + FK K + + + DA D + Sbjct: 209 LCSADSSTAENVLTEGFK---DKVELVSVPNQLDCLVRLQLGEVDALVTDGALGEGQLAQ 265 Query: 208 ND-----------RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 + P++ D + A+ Q + V+ + Sbjct: 266 DPSLDMQGGPDENNPADR----DSPAWEYYGIAMNQDSPQLVARVNKILEDFRADQWQAT 321 Query: 257 TQKNINQVSK-DTTNPDVQRFLGID 280 K K + DV+ LG Sbjct: 322 YTKWFGAGEKVEPPKADVKINLGTP 346 >gi|170699904|ref|ZP_02890933.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] gi|170135168|gb|EDT03467.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] Length = 257 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 44/269 (16%), Positives = 93/269 (34%), Gaps = 19/269 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M +S L + T+ + + D L + V G GFD Sbjct: 1 MKLKTLLSAASLGMALLTAIAPGTAFAQD---SNVLNVATDATFPPMEFVD-KGQRTGFD 56 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL+ A+ ++Q+ ++ K L +++ D T R + Sbjct: 57 IDIMNALAKAMGK---QVQWTDIDFKGLIPGLVARRFDAAISGIYITPERAQVVDFTQS- 112 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + G ++ I +++ L+G + VQ GT + L D + + + E+ + Sbjct: 113 -YFAGGLSALVKADSPIKTLADLNGKKVSVQVGTKSVNFLRDNYP----QVQRVEVEKNQ 167 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E+ R DA A + RP +L ++ A+ + +++ + Sbjct: 168 EMFDLVGIGRADAAVTGKP--AAYQFVRTRPG-FRVLDKELTTEAYGIAVRKDESQLRDQ 224 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTT 269 ++ A + A G + + + Sbjct: 225 MNAAL-AKIKA--DGTYNAIVKKWFGASA 250 >gi|209551039|ref|YP_002282956.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209536795|gb|ACI56730.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 274 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 45/245 (18%), Positives = 88/245 (35%), Gaps = 12/245 (4%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 + + +A+ + +IK +G L GI + V +G GFD D + + K Sbjct: 22 GATTASAATVEEIKAKGTLVVGIQGDNAPWGFVNTSGKQDGFDADIATLFAKELG---VK 78 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 +++ PL R AL + ++DIL T R S+ + K + Sbjct: 79 VEFQPLAVANRIPALTTGKVDILFATMAMTEERAKSIQY--SKPYAANTISLYAAKADAV 136 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + + ++ I V ++ + + D A F+ A + + A G+ Sbjct: 137 KAPADVAAWEIGVPKSSSQDKAVTD---AVGSTATIRRFDDDAATIQALISGQVKAVGGN 193 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL-GI 256 Y +L + D + K+ G+ +W + + + EL I Sbjct: 194 --QFYGQRLDAASAGTYERKIDFL-KTYNGVGTRLGEKDWNEAANSFIDKIKASGELAAI 250 Query: 257 TQKNI 261 T+K + Sbjct: 251 TKKWM 255 >gi|306826066|ref|ZP_07459402.1| amino acid ABC superfamily ATP binding cassette transporter solute-binding protein [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304431782|gb|EFM34762.1| amino acid ABC superfamily ATP binding cassette transporter solute-binding protein [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 268 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 48/273 (17%), Positives = 95/273 (34%), Gaps = 19/273 (6%) Query: 3 KDFFVSILCLIIL--FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWK 57 K +++ L++L F +T + + IK +G L +N F V Sbjct: 5 KKVLMTMFGLLMLPLLFACSNTQSQGVEAIKAKGKLVVALNPEFAPFEYQKLVDGKNQIV 64 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G DV+ +A++ + + +++ P++ +L S + D+ T R S Sbjct: 65 GSDVELAKAIAKELGVE---VEFSPMSFDNVLASLDSGKADLAISGVSKTEER--SQVYD 119 Query: 118 FRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F Y I+ K SV L+ + Q G+ E + + ++ P Sbjct: 120 FSIPYYTSKNKVIVRKSELTNYQSVKDLAQKKVGAQKGSIQETLAKETLQNASLVSLP-- 177 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + ++ + DA + N + D + A A+ + Sbjct: 178 --KNGNLITDLKSGQLDAVIFEEPVAKGFVENNPDLAIAEFDFDNDKEDSYAVAMKKDSK 235 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 E V T + + EL +K I+ K + Sbjct: 236 ELKEAVDKTIQKLKDSGEL---EKLIDDAFKAS 265 >gi|51893761|ref|YP_076452.1| amino acid ABC transporter substrate-binding protein [Symbiobacterium thermophilum IAM 14863] gi|51857450|dbj|BAD41608.1| amino acid ABC transporter substrate-binding protein [Symbiobacterium thermophilum IAM 14863] Length = 291 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 49/260 (18%), Positives = 89/260 (34%), Gaps = 23/260 (8%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVDFCRALSSAIFDDPS 76 S L IK+ G + + F + G++++ A+++ + Sbjct: 47 AEAPVSRLEQIKQAGKIVVATSADYPPFEYHAIIDGKDKIVGWEMELAEAIANELG---V 103 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK- 135 K++ L L + + D++ T R S+ + + Q ++ K Sbjct: 104 KLEITEGIFDTLLLDLAAGKADMVISAMTITPERLESVDFSE--PYWMTAQSVLIPKAAE 161 Query: 136 -GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I S L G +I VQ GTT E+ + A +E E A R A Sbjct: 162 GTIQSAEDLIGKTIGVQLGTTGEIAAKEVEGA-----EVRSYELFEAAVLDLVAGRVQAV 216 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 GD + + T + + ++K A A Q D E V+ +E Sbjct: 217 VGDYAVVKNYAATRPE----LTVAFELTKEENAVAFRQDDDELREAVNAIL---AKLKED 269 Query: 255 GITQKNINQVSKDTTNPDVQ 274 G + I + + P+V+ Sbjct: 270 GTIDQLIEK-YEVAPPPEVK 288 >gi|325496747|gb|EGC94606.1| glutamine ABC transporter periplasmic protein [Escherichia fergusonii ECD227] Length = 248 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 53/267 (19%), Positives = 90/267 (33%), Gaps = 23/267 (8%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K F L + L F S A L +T V F + + + GFDV Sbjct: 1 MKSVFKVSLAALTLAFAVSSHAADK--------KLVVATDTAFVPFEFKQGD-KYVGFDV 51 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D A++ + D + P++ ALQ+K +D+ T R+ ++ + Sbjct: 52 DLWAAIAKELKLD---YELKPMDFSGIIPALQTKNVDLALAGITITDERKKAIDFSDG-- 106 Query: 122 TYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G ++ + SV L G + V++GT + DY KA+ F ++ Sbjct: 107 YYKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNID 162 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +R DA D + T + D + A +G E + Sbjct: 163 NAYMELGTNRADAVLHDTPNILYFIKTAGN-GRFKAVGDSLEAQQYGIAFPKGSDELRDK 221 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKD 267 V+ T E G + + Sbjct: 222 VNGALK---TLRENGTYNEIYKKWFGT 245 >gi|295396899|ref|ZP_06807023.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Aerococcus viridans ATCC 11563] gi|294974833|gb|EFG50536.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Aerococcus viridans ATCC 11563] Length = 484 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 46/236 (19%), Positives = 87/236 (36%), Gaps = 11/236 (4%) Query: 37 KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96 G++ +G+ GFD+D A++ +++ P++ + L S Sbjct: 42 VIGLDDTFAPMGFRDGSGELVGFDIDLANAVADLYG---WNLEFQPIDWVMKETELNSGN 98 Query: 97 IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT 156 ID++ T RE + + GQ I K I +S L+G +I Q+G+T+ Sbjct: 99 IDMIWNGYGITPEREEMVLFSE--PYIESGQMVISKKGSDIDELSDLAGKTIATQSGSTS 156 Query: 157 ELTLADYFKA--HNMKYHPIVFERVEEIDAAYRAHRCDA-YTGDISALYALKLTNDRPSE 213 + ++ + + P+++ E+ A A R DA Y GDI + Y L Sbjct: 157 LTFMQEWPDDLYNQLADEPVLYPSYNEVFADLDADRVDAIYAGDIYSRYTLNQKGTLDEY 216 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 + + S P+ + DT V + + +D+ Sbjct: 217 EYFVDET-SIEPMGVGFRKSDTALKEQVDAGIEELRQNGSYAEIEA--KWFGEDSE 269 >gi|307137436|ref|ZP_07496792.1| glutamine ABC transporter periplasmic protein [Escherichia coli H736] gi|331641327|ref|ZP_08342462.1| glutamine-binding periplasmic protein (GlnBP) [Escherichia coli H736] gi|331038125|gb|EGI10345.1| glutamine-binding periplasmic protein (GlnBP) [Escherichia coli H736] Length = 248 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 53/267 (19%), Positives = 90/267 (33%), Gaps = 23/267 (8%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K L + L F S A L +T V F + + + GFDV Sbjct: 1 MKSVLKVSLAALTLAFAVSSHAADK--------KLVVATDTAFVPFEFKQGD-KYVGFDV 51 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D A++ + D + P++ ALQ+K +D+ T R+ ++ + Sbjct: 52 DLWAAIAKELKLD---YELKPMDFSGIIPALQTKNVDLALAGITITDERKKAIDFSDG-- 106 Query: 122 TYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G ++ + SV L G + V++GT + DY KA+ F ++ Sbjct: 107 YYKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNID 162 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +R DA D + T E + D + A +G E + Sbjct: 163 NAYMELGTNRADAVLHDTPNILYFIKTAGN-GEFKAVGDSLEAQQYGIAFPKGSDELRDK 221 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKD 267 V+ T E G + + Sbjct: 222 VNGALK---TLRENGTYNEIYKKWFGT 245 >gi|269139576|ref|YP_003296277.1| cationic amino acid ABC transporter, periplasmic binding protein [Edwardsiella tarda EIB202] gi|267985237|gb|ACY85066.1| cationic amino acid ABC transporter, periplasmic binding protein [Edwardsiella tarda EIB202] gi|304559464|gb|ADM42128.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtI [Edwardsiella tarda FL6-60] Length = 256 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 46/267 (17%), Positives = 94/267 (35%), Gaps = 28/267 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L I + T+ T ++ F + A +GFD Sbjct: 14 MKKIIIAAMLAGISVSATAAQT-------------IRFAAEASYPPFEFMDAQNKMQGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A+ + + + + +L+ K++D + D T R+ + + Sbjct: 61 VDLANAICQQMKATCT---FSNQSFDSLIPSLKFKRVDAVISGMDITPERQKQVDFSQ-- 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+D + +K ++ V+ L G + +Q GTT + L D + + P+ ++ + Sbjct: 116 -PYYDNSALFIAEKGKVADVAALKGKRVGIQNGTTHQKYLMD----KHPELTPVPYDSYQ 170 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R DA GD + + N P + + L A+ +G+ Sbjct: 171 NAILDLKNGRIDAVFGDTAVVNEWMKQNPNLAPVGTKVTDADYFGTGLGIAVRKGNGPLL 230 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVS 265 + ++ G Q N+ Sbjct: 231 EQFNAALN---QLKQDGQYQAIYNKWF 254 >gi|301026982|ref|ZP_07190370.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 196-1] gi|299879475|gb|EFI87686.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 196-1] Length = 248 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 51/267 (19%), Positives = 89/267 (33%), Gaps = 23/267 (8%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K L + L F S A L +T V F + + + GFDV Sbjct: 1 MKSVLKVSLAALTLAFAVSSHAADK--------KLVVATDTAFVPFEFKQGD-KYVGFDV 51 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D A++ + D + P++ ALQ+K +D+ T R+ ++ + Sbjct: 52 DLWAAIAKELKLD---YELKPMDFSGIIPALQTKNVDLALAGITITDERKKAIDFSDG-- 106 Query: 122 TYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G ++ + SV L G + V++GT + DY KA+ F ++ Sbjct: 107 YYKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNID 162 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +R DA D + T + + D + A + E + Sbjct: 163 NAYMELGTNRADAVLHDTPNILYFIKTAGN-GQFKAVGDSLEAQQYGIAFPKDSDELRDK 221 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKD 267 V+ T E G + + Sbjct: 222 VNGALK---TLRENGTYNEIYKKWFGT 245 >gi|16079454|ref|NP_390278.1| High affinity arginine ABC transporter binding lipoprotein [Bacillus subtilis subsp. subtilis str. 168] gi|221310318|ref|ZP_03592165.1| hypothetical protein Bsubs1_13156 [Bacillus subtilis subsp. subtilis str. 168] gi|221314642|ref|ZP_03596447.1| hypothetical protein BsubsN3_13077 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319565|ref|ZP_03600859.1| hypothetical protein BsubsJ_12998 [Bacillus subtilis subsp. subtilis str. JH642] gi|221323841|ref|ZP_03605135.1| hypothetical protein BsubsS_13127 [Bacillus subtilis subsp. subtilis str. SMY] gi|321311879|ref|YP_004204166.1| High affinity arginine ABC transporter binding lipoprotein [Bacillus subtilis BSn5] gi|1731062|sp|P54535|ARTP_BACSU RecName: Full=Arginine-binding extracellular protein ArtP; Flags: Precursor gi|1303949|dbj|BAA12604.1| YqiX [Bacillus subtilis] gi|2634832|emb|CAB14329.1| High affinity arginine ABC transporter binding lipoprotein [Bacillus subtilis subsp. subtilis str. 168] gi|320018153|gb|ADV93139.1| High affinity arginine ABC transporter binding lipoprotein [Bacillus subtilis BSn5] Length = 255 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 53/259 (20%), Positives = 98/259 (37%), Gaps = 11/259 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + I T+ ++ S KK+ L G + F + + + GFD Sbjct: 1 MKKWLLLLVAACITFALTACGSSNSGSESGKKK--LIMGTSADYKPFEYKEGD-NIVGFD 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ +AL+ + I+ ++ AL+SKQ+D++ T R+ + Sbjct: 58 VELAKALAKKAGYE---IEVQDMDFNSLITALKSKQVDLVLSGMTPTPERKKQVDF--SD 112 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y + K GI S+ L G ++ VQ G+ E + + K R+ Sbjct: 113 VYYTANHMIVSKKDSGIQSLKDLKGKTVGVQLGSIQEEKGKELSPEYGFKTEDR--NRIS 170 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 ++ ++ R DA + +ND VI ++ A A + D+E + Sbjct: 171 DLVQEIKSDRFDAAIIEDIVAEGYFKSNDDLQGFVIPDAKAEEAGSAIAFRK-DSELTDK 229 Query: 241 VSWTHYAMVTAEELGITQK 259 + M EL +K Sbjct: 230 FNKALKEMEDNGELEKLKK 248 >gi|317053175|ref|YP_004119529.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b] gi|316953502|gb|ADU72973.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b] Length = 272 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 44/256 (17%), Positives = 89/256 (34%), Gaps = 13/256 (5%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 V C+ + + NA L +I K L G+N L GFD + Sbjct: 10 LVIASCIASALLGAATANARSLDEIMKSKTLIVGVNPNLPPLGVYDDKNQISGFDATVAK 69 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ ++ K++ + + + +R + S +ID + R + T + Sbjct: 70 KIADSMG---VKLELVAVGSNDRVPFIMSDKIDAVMGGMTRNDDRMKVVDFTDPVNT--E 124 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQA--GTTTELTLADYFKAHNMKYHPIVFERVEEID 183 G + KK L+ ++ + GTT + D ++ + + Sbjct: 125 VLGILTTDKKPYKKWQDLNDPAVKLVQVRGTTPIKYIQDNIPKAQ----LLILDNYPDAV 180 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 A R DA + L T P++ ++ D I A+ +G+T ++ Sbjct: 181 RAIAQGRADALI--DVLDFMLDYTKKYPTKWHVVDDPIEVDYDCIAVSKGNTALREKLNT 238 Query: 244 THYAMVTAEELGITQK 259 A+ + +G + K Sbjct: 239 EIAALHKSGFIGSSWK 254 >gi|254303609|ref|ZP_04970967.1| ABC superfamily ATP binding cassette transporter binding protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323801|gb|EDK89051.1| ABC superfamily ATP binding cassette transporter binding protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 253 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 49/265 (18%), Positives = 99/265 (37%), Gaps = 18/265 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V ++ ++ + N + I KRG L G + F + NG+ KG+D Sbjct: 1 MKKILIVLLITIVSVISY---ANNDGVEKILKRGVLYVGTTSDYKPFTYI-ENGEHKGYD 56 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ + ++ + K++++P K LQ+ + DI T R+ Sbjct: 57 IEVAKLIAKELG---VKVEFVPTTWKTLLDDLQAGKFDIAMGGITRTTKRQT--ICNMTN 111 Query: 121 ITYFDGQGFIMHK--KKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 G+ F++ K K +S+ ++ + V G T E + +Y I + Sbjct: 112 PYLVFGKCFLVRKGDKNKYNSLEAVNKPNVRVGVNIGGTNEALVNEYIAKA----TVIRY 167 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + ++ A D + + N + E +L ++KS + I + + Sbjct: 168 KNNLDVPVALEKGEVDVMITETPEAITYQKNNPK-LEGALLDKTLTKSQMGYMIAKENQH 226 Query: 237 WYNIVSWTHYAMVTAEELGITQKNI 261 N V++ + E+ QK Sbjct: 227 LLNTVNFILSELELRGEIEKLQKEY 251 >gi|56697509|ref|YP_167877.1| polar amino acid ABC transporter periplasmic substrate-binding protein [Ruegeria pomeroyi DSS-3] gi|56679246|gb|AAV95912.1| polar amino acid uptake family ABC transporter, periplasmic substrate-binding protein [Ruegeria pomeroyi DSS-3] Length = 277 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 46/256 (17%), Positives = 91/256 (35%), Gaps = 17/256 (6%) Query: 6 FVSILCLIILFFTSFSTNAS-----ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 FV + + ++ + A I +RG + G+ + G G + Sbjct: 4 FVGGTTIAAMLMSTGAAMAEQCTNETWNKIAQRGTIVVGVKADTRPWGYRDQTGGIIGME 63 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D R ++ + ++ + + + R L+ +ID++ R +G+ P Sbjct: 64 ADMARQVADTLG---VALELVAVESSNRMQFLEGGRIDLMIATMSDRKDRREIVGI-VGP 119 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G + K G+++ S L +C + G + + A I F Sbjct: 120 NYYSSGTNVMTPKALGVTAWSDLKNRPVCGKQGAFYNQIVEQRYGAQ-----IIAFGSNA 174 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII--QGDTEWY 238 E A R +C A+ D S++ A L + E + +P A+ + D + Sbjct: 175 EALQALRDKKCIAWVYDDSSIAA-DLASGHYDEFEMPLVSEDNNPWGLAVPIAERDCVFG 233 Query: 239 NIVSWTHYAMVTAEEL 254 +S Y+ + EL Sbjct: 234 RFMSGMQYSWHQSGEL 249 >gi|323702152|ref|ZP_08113819.1| extracellular solute-binding protein family 3 [Desulfotomaculum nigrificans DSM 574] gi|323532839|gb|EGB22711.1| extracellular solute-binding protein family 3 [Desulfotomaculum nigrificans DSM 574] Length = 269 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 46/231 (19%), Positives = 79/231 (34%), Gaps = 13/231 (5%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L G + F V NG GFDVD AL + + + +N ALQ+ Sbjct: 45 KLVVGSDAAFAPFEFV-ENGKPTGFDVDLITALCEEAGYE---LDFRNMNFDGLIPALQT 100 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM-HKKKGISSVSQLSGASICVQAG 153 QID+ R+ + Y G + K I L G I VQ+G Sbjct: 101 GQIDVAVSGMSINEERKQVVNF--TDPYYKSGLIVAVQAKNNDIKGFDDLKGKKIAVQSG 158 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 TT A + K + F +++ + DA D L + ++ Sbjct: 159 TTG----AKMAEKVTTKDKIVYFSNSDQVLLDLKNGSVDAVINDYPVLKYFMDKVAK-ND 213 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQKNINQ 263 ++ + ++ A+ + TE ++ + + I +K N+ Sbjct: 214 VKLVGEKLTSEDYGIAVPKNKTEVLEKLNAALKKIKENGKYAEIYKKWFNE 264 >gi|320529942|ref|ZP_08031019.1| putative glutamine ABC transporter periplasmic protein [Selenomonas artemidis F0399] gi|320137960|gb|EFW29865.1| putative glutamine ABC transporter periplasmic protein [Selenomonas artemidis F0399] Length = 258 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 47/265 (17%), Positives = 80/265 (30%), Gaps = 15/265 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKK-RGFLKCGINTGLVGFAEVKANGD-WKG 58 M I +L S K+ L+ G F ++G Sbjct: 1 MKLKKLAMIFTGTLLSLAMVGCGGSSGDQAKQEAKVLRVGATIDFAPFEFQDEGQKEYQG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD+D RA++ + + + + ALQ+K ID++ R+ + Sbjct: 61 FDMDLIRAIAKEMGREA---EIQNIGFDGLIPALQAKNIDVIISGMTINDERKEKVNF-- 115 Query: 119 RPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y G ++ + I S + L G + Q GTT+ L + + Sbjct: 116 SAPYYQSGLTMVVRSDEEAIKSFNDLKGHKVAAQIGTTSANMLKE-----QEGITVLELN 170 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + +A DA D L D++S AI + +TE Sbjct: 171 TPADCFMELKARGVDAVVNDRPVNDYYINQTQAVG-VKSLSDMLSAEEYGIAISKDNTEL 229 Query: 238 YNIVSWTHYAMVTAEEL-GITQKNI 261 + + E I QK Sbjct: 230 QKEIDAALKKLHDNGEYDKIYQKWF 254 >gi|86607415|ref|YP_476178.1| amino acid transporter, amino acid-binding protein [Synechococcus sp. JA-3-3Ab] gi|86555957|gb|ABD00915.1| amino acid transporter, amino acid-binding protein [Synechococcus sp. JA-3-3Ab] Length = 266 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 36/227 (15%), Positives = 74/227 (32%), Gaps = 9/227 (3%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 ++ + A +I + G ++ + L G +GF+++ R Sbjct: 16 MAAGLALACLGRGIPAAARPWPEIVRSGQVRIAVKDNLRPLGFRDPMGKLQGFEIELARE 75 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L S + ++ +P+ +R A+ + ++D+ T R + Y DG Sbjct: 76 LGSRLLGSAEAVELVPVANVKRLQAVAAGEVDLAIAQLGITPDRARQVEF--TSPYYQDG 133 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 ++ + S + GA I V G+ L Y + + E Sbjct: 134 PSLVVARSHNWERWSDVGGARIAVLRGSAAIPYLQRYLP----GVELVAVDSYREGAELL 189 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 A+ D S L + + L ++ L A+ +G Sbjct: 190 LKGAVQAWAADRSVLAGWLAEHP---QFQFLGSPLAAVGLGIALPKG 233 >gi|13473258|ref|NP_104825.1| glutamine-binding protein, glutamine ABC transporter [Mesorhizobium loti MAFF303099] gi|14024006|dbj|BAB50611.1| glutamine-binding protein, glutamine ABC transporter [Mesorhizobium loti MAFF303099] Length = 276 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 45/246 (18%), Positives = 87/246 (35%), Gaps = 12/246 (4%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S+L + RG L G + + G+ G D+ R L+ +FDDP+K++++ + Sbjct: 26 SLLRTVLDRGKLIVGTGSTNAPWHFENDAGELVGMDITMGRILAKGLFDDPTKVEFVMQD 85 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL- 143 +R + + ++DI + T R S + F Y +G + + +L Sbjct: 86 PAQRIPNVTTNKVDITIQFMTMTAQR--SQLINFSRPYYVEGVALLTLPTAENKTFDKLL 143 Query: 144 ---SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 S I + E ++ + + + A + R DA D+S Sbjct: 144 AGGSATRISILQNVDAESSVHYALPQAQ----VLQIDTQANVLQALESKRADAAAVDLST 199 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 + L + P ++ A+ QGD +W V+ T + E + Sbjct: 200 VRWLA--SRNPDKYFDAGKSWYSMLYGAALRQGDLDWLTFVNQTFTIAMFGHESALYDAA 257 Query: 261 INQVSK 266 Sbjct: 258 FKDYFG 263 >gi|167563743|ref|ZP_02356659.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia oklahomensis EO147] gi|167570891|ref|ZP_02363765.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia oklahomensis C6786] Length = 266 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 53/280 (18%), Positives = 95/280 (33%), Gaps = 20/280 (7%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K F S + ++ + S +A +L +K+ G LK + F ++G + Sbjct: 1 MKVLKPMFTSAVVAALVGIATASAHAADLLDSVKQAGVLKIALEGTYPPFDYRNSDGQLE 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD +A+++ + P Q++ LQ+ + D++ T R+ +L + Sbjct: 61 GFDVDVAKAVAARLGVKP---QFVTTEWSGILAGLQAGKFDVIVNQVGITPARKQALDFS 117 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + K + L G + V GT AD K + Sbjct: 118 QPYVYSAAQLIQRADDKHDYGAPGALQGKRLGVTLGT----NFADLAKT-LPGVDVRTYP 172 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTND---RPSEHVILPDIISKSPLAPAIIQGD 234 E A R D D L L RP V + + +G+ Sbjct: 173 GAPEKLRDVSAGRIDVSMDDRLMLPYLIKNAHMPLRPGATVKGGET----QMGIPFRKGN 228 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 ++ + +M L ++ DT+ P+ Q Sbjct: 229 PKFAKAIDDALASMRQDGTLKKIS--MHWFGVDTSIPNAQ 266 >gi|325062835|gb|ADY66525.1| amino acid ABC transporter, substrate binding protein [Agrobacterium sp. H13-3] Length = 279 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 51/257 (19%), Positives = 90/257 (35%), Gaps = 17/257 (6%) Query: 9 ILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWK-GFDVDFCRA 66 I +++ + + +A L IK RG L G+ F + + G ++D +A Sbjct: 13 IAGTVVIASMATAAHADATLDRIKGRGKLTVGVILSGAPFGFIDPKTQEQKGLNIDVAKA 72 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L++ + + + R LQ ++DIL N +T R +L P +D Sbjct: 73 LAAGLGVELVT---ETVTPPNRVQFLQQGKVDILIANMQYTEERAKTLDYVPTP---YDR 126 Query: 127 QGFIM--HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 QG K GI L G CV G+ L + + A E Sbjct: 127 QGGAAIGRKDSGIKDWPDLKGKIACVSQGSNYTQPLIEQYGAQ-----VKALPSQPESLL 181 Query: 185 AYRAHRCDAYTGDISAL-YALKLTNDRPSEHVIL-PDIISKSPLAPAIIQGDTEWYNIVS 242 A + CD L L+ D ++ IL P + S + +G+ + + Sbjct: 182 ALKGGNCDVSVHVNGTLSLMLQDRADEWKDYGILIPTDLIPSDSVIWLRKGEADTQAALD 241 Query: 243 WTHYAMVTAEELGITQK 259 + + ++ K Sbjct: 242 KIVKELHASGKMIEFAK 258 >gi|303233198|ref|ZP_07319871.1| bacterial extracellular solute-binding protein, family 3 [Atopobium vaginae PB189-T1-4] gi|302480783|gb|EFL43870.1| bacterial extracellular solute-binding protein, family 3 [Atopobium vaginae PB189-T1-4] Length = 332 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 40/227 (17%), Positives = 83/227 (36%), Gaps = 12/227 (5%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 + + G L+ G + F+ + +G +GFD + L+ I D K + + + Sbjct: 88 KVAQAGKLRIGGVKTSILFSILDEKDGKVRGFDAGLSQMLTRYIVGDTQKQELTLVTSNT 147 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM-HKKKGISSVSQLSGA 146 R LQ+ Q+D++ T R+ + A Y QG ++ I+ ++ L+ Sbjct: 148 RESVLQNDQVDVVFATYSITDARKKVISFA--GPYYTTQQGILVTADNTSINGLADLANK 205 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 + Q+G+T L F EE A R DAY D + + Sbjct: 206 KVAAQSGSTGPSILEKLAPEA----TVQEFATDEEARGALSQGRVDAYVIDETMQRGSIV 261 Query: 207 TNDRPSEHVILPDIISK-SPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 P ++ ++ + + D++ ++ ++ + Sbjct: 262 R--NPGKYKLVGESFGPVDSYGIGVP-HDSDAVQFINEFLKMIIDSG 305 >gi|227524321|ref|ZP_03954370.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus hilgardii ATCC 8290] gi|227088552|gb|EEI23864.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus hilgardii ATCC 8290] Length = 283 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 46/285 (16%), Positives = 97/285 (34%), Gaps = 19/285 (6%) Query: 3 KDFFVSILCLIILFFTSF---------STNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 K + I+ L+++F S TN + K+ + G++ G V + Sbjct: 6 KKCPLVIVTLLLMFVLSGCRFESRQKMETNPDTWSIVSKQKKIVIGLDDGFVPMGFETKS 65 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G G+DVD +A+ K+ + P++ L++ ID++ R Sbjct: 66 GKIVGYDVDLAKAVFKQYG---IKVNFQPIDWSMNVTELRNGTIDLIWNGFSMNPQRAKK 122 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMK 170 + + + Q I +K I+S + + VQAG+ + + K Sbjct: 123 VTFSE--PYLVNKQVLISKEKNHINSFADMKNRVAGVQAGSAGAMDIDSQPKLLKDRIKN 180 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 + PI+++ E + R D + + +P K + Sbjct: 181 HTPILYDSFTEAFIDLNSDRIQGLLIDSIYAGYYIGHQKDRATYQSVPSQFPKEYYGVGM 240 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 +GDT+ + + +L K + +P +++ Sbjct: 241 RKGDTKLKQKIDAGLNRLAKDGQLAKINK--KWFGTNAYSPLMKK 283 >gi|160933931|ref|ZP_02081318.1| hypothetical protein CLOLEP_02793 [Clostridium leptum DSM 753] gi|156866604|gb|EDO59976.1| hypothetical protein CLOLEP_02793 [Clostridium leptum DSM 753] Length = 293 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 41/263 (15%), Positives = 85/263 (32%), Gaps = 18/263 (6%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDD 74 ++ +T+ ++ G L G++ GD GFD+D + + S + Sbjct: 37 SSSAAATDDQSWEKVESAGTLVLGLDDAFPPMGYKDTETGDIIGFDIDIAKEVCSRLG-- 94 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 +++ P++ + L++ +D L T R+ + Q ++ Sbjct: 95 -IELKLQPIDWNNKQSELENGNVDCLWNGFSKTPERD--EQFNLSIPYMKNEQIILVKTD 151 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY--HPIVFERVEEIDAAYRAHRCD 192 ++ L+G +I VQA ++ E L + E + D Sbjct: 152 SDYQTLEDLAGKTIGVQADSSAESALEAEENKEFKDSLGEIVKIEDYAMAVLEIQNGTID 211 Query: 193 AYTGDISALYALKLTNDRPSEHVILPD------IISKSPLAPAIIQGDTEWYNIVSWTHY 246 A + D + A N+ P + IL D ++ + D V Sbjct: 212 AISID--EVVARFYLNNDPDAYRILSDSDGNALSLATEDYVIGFRKSDNALKEKVEEALR 269 Query: 247 AMVTAEELGITQKNINQVSKDTT 269 M + + + +D T Sbjct: 270 EMSSDGTMKTISE--EWFGEDVT 290 >gi|225868655|ref|YP_002744603.1| amino acid ABC transporter, extracellular amino acid-binding protein [Streptococcus equi subsp. zooepidemicus] gi|225701931|emb|CAW99453.1| putative amino acid ABC transporter, extracellular amino acid-binding protein [Streptococcus equi subsp. zooepidemicus] Length = 278 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 39/275 (14%), Positives = 88/275 (32%), Gaps = 16/275 (5%) Query: 1 MYKDFFVSILCLII-LFFTSFSTNASILGDI----KKRGFLKCGINTGLVGFAEVKANGD 55 + K V++ L ++N D K++ + G + V +G Sbjct: 3 LKKTLLVALFAATATLLVACGASNKQTSSDAWNSYKEKKTITLGFDNTFVPMGYKDESGK 62 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFD++ +A+ K++Y +N + L + +ID++ T R+ + Sbjct: 63 NTGFDIELAKAVFDQYG---IKVKYQAINWDLKETELNNGKIDLIWNGYSVTKERQAKVA 119 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH--- 172 + + Q + K ISS + + ++ Q+G++ + K Sbjct: 120 FTE--LYMKNEQVLVTQKSSQISSFADMKNKTLGAQSGSSGYDAFTSHPKVLKDLVKGND 177 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 +E + + R D D + I+ A + + Sbjct: 178 ATQYETFTQAFIDLKNKRIDGLLIDRVYANYYLQQEGELDRYNIIASEFEGEDFAVGVRK 237 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 D ++ ++ + G QK + + Sbjct: 238 ADKTLQKKITQALKSLY---QDGTFQKISKKWFGE 269 >gi|315612254|ref|ZP_07887168.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis ATCC 49296] gi|315315647|gb|EFU63685.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis ATCC 49296] Length = 268 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 48/273 (17%), Positives = 91/273 (33%), Gaps = 19/273 (6%) Query: 3 KDFFVSILCLII--LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWK 57 K +++ L++ L F +T + + IK +G L +N F V Sbjct: 5 KKVLITMFGLLMFPLLFACSNTQSQGVEAIKAKGKLVVALNPEFAPFEYQKLVDGKNQIV 64 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G DV+ +A++ + + +++ P++ +L S + D+ T R S Sbjct: 65 GSDVELAKAIAKELGVE---VEFSPMSFDNVLASLDSGKADLAISGVSKTEER--SQVYD 119 Query: 118 FRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F Y I+ K SV L+ + Q G+ E K + Sbjct: 120 FSIPYYTSKNKVIVRKSELTNYQSVKDLAQKKVGAQKGSIQET----LAKETLQDSSLVS 175 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + ++ + DA + N + D + A A+ + Sbjct: 176 LPKNGNLITDLKSGQLDAVIFEEPVAKGFVENNPDLAIAEFDFDNDKEDSYAVAMKKDSK 235 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 E V T + + EL K I+ K + Sbjct: 236 ELKEAVDKTIQKLKDSGELD---KLIDDAFKAS 265 >gi|70728423|ref|YP_258172.1| basic amino acid ABC transporter periplasmic basic amino acid-binding protein [Pseudomonas fluorescens Pf-5] gi|68342722|gb|AAY90328.1| basic amino acid ABC transporter, periplasmic basic amino acid-binding protein [Pseudomonas fluorescens Pf-5] Length = 258 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 55/266 (20%), Positives = 91/266 (34%), Gaps = 21/266 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +S L L +L +S L + GI FA A G GFD Sbjct: 1 MKKLPLISGLALSLLACSSLFAAEKTL---------RLGIEAAYPPFAFKTAEGKIGGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D AL + + K +++ +L+ K+ID + T R S+ + Sbjct: 52 YDIGNALCAQM---QVKCEWIEGEFDGLIPSLKVKKIDAALSSMTITAERRKSVDFTHK- 107 Query: 121 ITYFDGQGFIMHKKKGISS-VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 YF +M K + + L G ++ VQ TTT+ + F+ + + Sbjct: 108 -YYFTSSRLVMKKGAEVDDQYASLKGKTVGVQRSTTTDRYATEVFEPKG--IKVVRYSNN 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK----SPLAPAIIQGDT 235 EEI A R DA D L + + P++ A+ +G++ Sbjct: 165 EEIYMDLAAGRLDAIFADSIPLADFLSMPRGAAYAFVGPELKDPKYVGEGAGIAVRKGNS 224 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNI 261 E ++ + E Q Sbjct: 225 ELVGELNKAIEDIRANGEYQKIQAKY 250 >gi|320183306|gb|EFW58161.1| Glutamine ABC transporter, periplasmic glutamine-binding protein [Shigella flexneri CDC 796-83] gi|332097421|gb|EGJ02401.1| glutamine-binding periplasmic protein [Shigella boydii 3594-74] Length = 248 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 52/268 (19%), Positives = 92/268 (34%), Gaps = 24/268 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M VS+ L ++F S L +T V F + + + GFD Sbjct: 1 MKSVLKVSLAALTLVFAVSSHA---------ADKKLVVATDTAFVPFEFKQGD-KYVGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A++ + D + P++ ALQ+K +D+ T R+ ++ + Sbjct: 51 VDLWAAIAKELKLD---YELKPMDFSGIIPALQTKNVDLALAGITITDERKKAIDFSDG- 106 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G ++ + SV L G + V++GT + DY KA+ F + Sbjct: 107 -YYKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNI 161 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + +R DA D + T + + D + A +G E + Sbjct: 162 DNAYMELGTNRADAVLHDTPNILYFIKTAGN-GQFKAVGDSLEAQQYGIAFPKGSDELRD 220 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKD 267 V+ T E G + + Sbjct: 221 KVNGALK---TLRENGTYNEIYKKWFGT 245 >gi|294636988|ref|ZP_06715310.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Edwardsiella tarda ATCC 23685] gi|291089816|gb|EFE22377.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Edwardsiella tarda ATCC 23685] Length = 243 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 48/267 (17%), Positives = 98/267 (36%), Gaps = 28/267 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K I+ +L S S +A+ ++ F + A +GFD Sbjct: 1 MKK-----IIIAAMLAGISVSASANE--------TIRFAAEASYPPFEFMDAQNKMQGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + I + + + +L+ K+ID + D T R+ + + Sbjct: 48 IDLANAICTQIKATCT---FSNQSFDSLIPSLKFKRIDAVISGMDITPERQKQVDFSQ-- 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+D + +K ++ V+ L G + +Q GTT + L D + + P+ ++ + Sbjct: 103 -PYYDNSALFIAEKGKVADVAALKGKRVGIQNGTTHQKYLMD----KHPELTPVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R DA GD + + N P + S L A+ +G+++ Sbjct: 158 NAILDLKNGRIDAVFGDTAVVNEWLKQNPNLAPVGSKVTDADYFGSGLGIAVRKGNSKLL 217 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVS 265 + ++ G Q ++ Sbjct: 218 EQFNQALN---QLKQDGTYQTIYDKWF 241 >gi|126179307|ref|YP_001047272.1| extracellular solute-binding protein [Methanoculleus marisnigri JR1] gi|125862101|gb|ABN57290.1| amino acid ABC transporter substrate-binding protein, PAAT family [Methanoculleus marisnigri JR1] Length = 257 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 37/247 (14%), Positives = 87/247 (35%), Gaps = 17/247 (6%) Query: 1 MYKDFFVSILC--LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K +++L + +L + GI+ F+ + +G+ +G Sbjct: 1 MKKYGILTLLACIVAVLAVAGAGCTGTTTEP-----DYVVGIDGAYPPFSYIDKDGNAQG 55 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD + ++ ++ ++ ++ LQ+ +ID++ T R + Sbjct: 56 FDVDSMKWIAEK---KGIEVTFMAVDWDAIIPTLQAGKIDMVYAGMSITPERLEKVNF-- 110 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGAS-ICVQAGTTTELTLADYFKAHNM--KYHPIV 175 + Q + + ++ L+G + I VQ G T + + + K + Sbjct: 111 SNPYWSINQDVVAREDSNVTLDDVLAGKAIIGVQRGCTAAIWIEENLVETGKMSKDNLRY 170 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + R DA D ++ + +P + + + + AI + DT Sbjct: 171 YPDTPAAVSDLEIGRIDAVMYDDVSI--QDIIAGKPLKTIGSVETQEQEQFGVAIRKEDT 228 Query: 236 EWYNIVS 242 ++ Sbjct: 229 ALLEFMN 235 >gi|15800563|ref|NP_286575.1| glutamine ABC transporter periplasmic protein [Escherichia coli O157:H7 EDL933] gi|15830143|ref|NP_308916.1| glutamine ABC transporter periplasmic protein [Escherichia coli O157:H7 str. Sakai] gi|16128779|ref|NP_415332.1| glutamine transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|26246786|ref|NP_752826.1| glutamine ABC transporter periplasmic protein [Escherichia coli CFT073] gi|74311354|ref|YP_309773.1| glutamine ABC transporter periplasmic protein [Shigella sonnei Ss046] gi|82543257|ref|YP_407204.1| glutamine ABC transporter periplasmic protein [Shigella boydii Sb227] gi|89107662|ref|AP_001442.1| glutamine transporter subunit [Escherichia coli str. K-12 substr. W3110] gi|91209845|ref|YP_539831.1| glutamine ABC transporter periplasmic protein [Escherichia coli UTI89] gi|110641015|ref|YP_668743.1| glutamine ABC transporter periplasmic protein [Escherichia coli 536] gi|117622992|ref|YP_851905.1| glutamine ABC transporter periplasmic protein [Escherichia coli APEC O1] gi|157158136|ref|YP_001462005.1| glutamine ABC transporter periplasmic protein [Escherichia coli E24377A] gi|157160288|ref|YP_001457606.1| glutamine ABC transporter periplasmic protein [Escherichia coli HS] gi|168749990|ref|ZP_02775012.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4113] gi|168756600|ref|ZP_02781607.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4401] gi|168764282|ref|ZP_02789289.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4501] gi|168767316|ref|ZP_02792323.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4486] gi|168779358|ref|ZP_02804365.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4076] gi|168787027|ref|ZP_02812034.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli O157:H7 str. EC869] gi|168799912|ref|ZP_02824919.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli O157:H7 str. EC508] gi|170020833|ref|YP_001725787.1| glutamine ABC transporter periplasmic protein [Escherichia coli ATCC 8739] gi|170080470|ref|YP_001729790.1| glutamine ABC transporter periplasmic binding protein [Escherichia coli str. K-12 substr. DH10B] gi|170680496|ref|YP_001742915.1| glutamine ABC transporter periplasmic protein [Escherichia coli SMS-3-5] gi|188494775|ref|ZP_03002045.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli 53638] gi|191166144|ref|ZP_03027978.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli B7A] gi|191173737|ref|ZP_03035260.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli F11] gi|193064406|ref|ZP_03045487.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli E22] gi|194428193|ref|ZP_03060736.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli B171] gi|194438450|ref|ZP_03070540.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli 101-1] gi|195936852|ref|ZP_03082234.1| glutamine ABC transporter periplasmic protein [Escherichia coli O157:H7 str. EC4024] gi|208809600|ref|ZP_03251937.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4206] gi|208814977|ref|ZP_03256156.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4045] gi|208822633|ref|ZP_03262952.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4042] gi|209397153|ref|YP_002269481.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4115] gi|209918058|ref|YP_002292142.1| glutamine ABC transporter periplasmic protein [Escherichia coli SE11] gi|215485898|ref|YP_002328329.1| glutamine ABC transporter periplasmic protein [Escherichia coli O127:H6 str. E2348/69] gi|217326304|ref|ZP_03442388.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli O157:H7 str. TW14588] gi|218553397|ref|YP_002386310.1| glutamine ABC transporter periplasmic protein [Escherichia coli IAI1] gi|218557716|ref|YP_002390629.1| glutamine ABC transporter periplasmic protein [Escherichia coli S88] gi|218694285|ref|YP_002401952.1| glutamine ABC transporter periplasmic protein [Escherichia coli 55989] gi|218699185|ref|YP_002406814.1| glutamine ABC transporter periplasmic protein [Escherichia coli IAI39] gi|218704189|ref|YP_002411708.1| glutamine ABC transporter periplasmic protein [Escherichia coli UMN026] gi|227884226|ref|ZP_04002031.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Escherichia coli 83972] gi|237707229|ref|ZP_04537710.1| periplasmic glutamine-binding protein [Escherichia sp. 3_2_53FAA] gi|238900070|ref|YP_002925866.1| glutamine transporter subunit [Escherichia coli BW2952] gi|253774186|ref|YP_003037017.1| glutamine ABC transporter periplasmic protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254160888|ref|YP_003043996.1| glutamine ABC transporter periplasmic protein [Escherichia coli B str. REL606] gi|254792006|ref|YP_003076843.1| glutamine ABC transporter periplasmic protein [Escherichia coli O157:H7 str. TW14359] gi|256021118|ref|ZP_05434983.1| glutamine ABC transporter periplasmic protein [Shigella sp. D9] gi|256023593|ref|ZP_05437458.1| glutamine ABC transporter periplasmic protein [Escherichia sp. 4_1_40B] gi|260843054|ref|YP_003220832.1| periplasmic glutamine-binding protein GlnH [Escherichia coli O103:H2 str. 12009] gi|260854103|ref|YP_003227994.1| periplasmic glutamine-binding protein GlnH [Escherichia coli O26:H11 str. 11368] gi|260866978|ref|YP_003233380.1| periplasmic glutamine-binding protein GlnH [Escherichia coli O111:H- str. 11128] gi|261225460|ref|ZP_05939741.1| glutamine transporter subunit; periplasmic binding component of ABC superfamily protein [Escherichia coli O157:H7 str. FRIK2000] gi|261258571|ref|ZP_05951104.1| periplasmic glutamine-binding protein GlnH [Escherichia coli O157:H7 str. FRIK966] gi|291281808|ref|YP_003498626.1| hypothetical protein G2583_1039 [Escherichia coli O55:H7 str. CB9615] gi|293404111|ref|ZP_06648105.1| glnH [Escherichia coli FVEC1412] gi|293409187|ref|ZP_06652763.1| conserved hypothetical protein [Escherichia coli B354] gi|298379893|ref|ZP_06989498.1| glnH [Escherichia coli FVEC1302] gi|300816459|ref|ZP_07096681.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 107-1] gi|300824272|ref|ZP_07104389.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 119-7] gi|300898304|ref|ZP_07116653.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 198-1] gi|300907141|ref|ZP_07124806.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 84-1] gi|300922836|ref|ZP_07138922.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 182-1] gi|300929384|ref|ZP_07144855.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 187-1] gi|300939849|ref|ZP_07154485.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 21-1] gi|300947104|ref|ZP_07161321.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 116-1] gi|300957011|ref|ZP_07169259.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 175-1] gi|300991896|ref|ZP_07179721.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 200-1] gi|300993355|ref|ZP_07180354.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 45-1] gi|301020688|ref|ZP_07184759.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 69-1] gi|301051266|ref|ZP_07198094.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 185-1] gi|301303569|ref|ZP_07209691.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 124-1] gi|301328005|ref|ZP_07221168.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 78-1] gi|301646244|ref|ZP_07246138.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 146-1] gi|306812786|ref|ZP_07446979.1| glutamine ABC transporter periplasmic protein [Escherichia coli NC101] gi|307313779|ref|ZP_07593396.1| cationic amino acid ABC transporter, periplasmic binding protein [Escherichia coli W] gi|309798041|ref|ZP_07692417.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 145-7] gi|312969165|ref|ZP_07783372.1| glutamine-binding periplasmic protein [Escherichia coli 2362-75] gi|312970888|ref|ZP_07785067.1| glutamine-binding periplasmic protein [Escherichia coli 1827-70] gi|331646030|ref|ZP_08347133.1| glutamine-binding periplasmic protein (GlnBP) [Escherichia coli M605] gi|331651820|ref|ZP_08352839.1| glutamine-binding periplasmic protein (GlnBP) [Escherichia coli M718] gi|331662168|ref|ZP_08363091.1| glutamine-binding periplasmic protein (GlnBP) [Escherichia coli TA143] gi|331672317|ref|ZP_08373108.1| glutamine-binding periplasmic protein (GlnBP) [Escherichia coli TA280] gi|331676549|ref|ZP_08377245.1| glutamine-binding periplasmic protein (GlnBP) [Escherichia coli H591] gi|331682318|ref|ZP_08382937.1| glutamine-binding periplasmic protein (GlnBP) [Escherichia coli H299] gi|84028666|sp|P0AEQ5|GLNH_ECO57 RecName: Full=Glutamine-binding periplasmic protein; Short=GlnBP; Flags: Precursor gi|84028667|sp|P0AEQ4|GLNH_ECOL6 RecName: Full=Glutamine-binding periplasmic protein; Short=GlnBP; Flags: Precursor gi|84028668|sp|P0AEQ3|GLNH_ECOLI RecName: Full=Glutamine-binding periplasmic protein; Short=GlnBP; Flags: Precursor gi|12513810|gb|AAG55183.1|AE005262_3 periplasmic glutamine-binding protein; permease [Escherichia coli O157:H7 str. EDL933] gi|26107185|gb|AAN79369.1|AE016757_273 Glutamine-binding periplasmic protein precursor [Escherichia coli CFT073] gi|41569|emb|CAA32382.1| unnamed protein product [Escherichia coli K-12] gi|1651365|dbj|BAA35483.1| glutamine transporter subunit [Escherichia coli str. K12 substr. W3110] gi|1787031|gb|AAC73898.1| glutamine transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|13360348|dbj|BAB34312.1| permease of periplasmic glutamine-binding protein [Escherichia coli O157:H7 str. Sakai] gi|73854831|gb|AAZ87538.1| periplasmic glutamine-binding protein [Shigella sonnei Ss046] gi|81244668|gb|ABB65376.1| periplasmic glutamine-binding protein [Shigella boydii Sb227] gi|91071419|gb|ABE06300.1| periplasmic glutamine-binding protein; permease [Escherichia coli UTI89] gi|110342607|gb|ABG68844.1| glutamine-binding periplasmic protein precursor [Escherichia coli 536] gi|115512116|gb|ABJ00191.1| glutamine ABC transporter periplasmic-binding protein [Escherichia coli APEC O1] gi|157065968|gb|ABV05223.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli HS] gi|157080166|gb|ABV19874.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli E24377A] gi|169755761|gb|ACA78460.1| cationic amino acid ABC transporter, periplasmic binding protein [Escherichia coli ATCC 8739] gi|169888305|gb|ACB02012.1| glutamine transporter subunit; periplasmic binding component of ABC superfamily [Escherichia coli str. K-12 substr. DH10B] gi|170518214|gb|ACB16392.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli SMS-3-5] gi|188015745|gb|EDU53867.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4113] gi|188489974|gb|EDU65077.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli 53638] gi|189003061|gb|EDU72047.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4076] gi|189356243|gb|EDU74662.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4401] gi|189363471|gb|EDU81890.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4486] gi|189365671|gb|EDU84087.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4501] gi|189373187|gb|EDU91603.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli O157:H7 str. EC869] gi|189377799|gb|EDU96215.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli O157:H7 str. EC508] gi|190903753|gb|EDV63468.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli B7A] gi|190905987|gb|EDV65603.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli F11] gi|192928868|gb|EDV82481.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli E22] gi|194413753|gb|EDX30032.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli B171] gi|194422674|gb|EDX38671.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli 101-1] gi|208729401|gb|EDZ79002.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4206] gi|208731625|gb|EDZ80313.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4045] gi|208738118|gb|EDZ85801.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4042] gi|209158553|gb|ACI35986.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4115] gi|209775788|gb|ACI86206.1| permease of periplasmic glutamine-binding protein [Escherichia coli] gi|209775790|gb|ACI86207.1| permease of periplasmic glutamine-binding protein [Escherichia coli] gi|209775792|gb|ACI86208.1| permease of periplasmic glutamine-binding protein [Escherichia coli] gi|209775794|gb|ACI86209.1| permease of periplasmic glutamine-binding protein [Escherichia coli] gi|209775796|gb|ACI86210.1| permease of periplasmic glutamine-binding protein [Escherichia coli] gi|209911317|dbj|BAG76391.1| glutamine ABC transporter substrate binding component [Escherichia coli SE11] gi|215263970|emb|CAS08311.1| glutamine transporter subunit [Escherichia coli O127:H6 str. E2348/69] gi|217322525|gb|EEC30949.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli O157:H7 str. TW14588] gi|218351017|emb|CAU96721.1| glutamine transporter subunit ; periplasmic binding component of ABC superfamily [Escherichia coli 55989] gi|218360165|emb|CAQ97714.1| glutamine transporter subunit ; periplasmic binding component of ABC superfamily [Escherichia coli IAI1] gi|218364485|emb|CAR02167.1| glutamine transporter subunit ; periplasmic binding component of ABC superfamily [Escherichia coli S88] gi|218369171|emb|CAR16926.1| glutamine transporter subunit ; periplasmic binding component of ABC superfamily [Escherichia coli IAI39] gi|218431286|emb|CAR12164.1| glutamine transporter subunit ; periplasmic binding component of ABC superfamily [Escherichia coli UMN026] gi|222032541|emb|CAP75280.1| glutamine-binding periplasmic protein [Escherichia coli LF82] gi|226898439|gb|EEH84698.1| periplasmic glutamine-binding protein [Escherichia sp. 3_2_53FAA] gi|227838978|gb|EEJ49444.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Escherichia coli 83972] gi|238861341|gb|ACR63339.1| glutamine transporter subunit [Escherichia coli BW2952] gi|242376603|emb|CAQ31312.1| glnH, subunit of glutamine ABC transporter [Escherichia coli BL21(DE3)] gi|253325230|gb|ACT29832.1| cationic amino acid ABC transporter, periplasmic binding protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972789|gb|ACT38460.1| glutamine ABC transporter periplasmic protein [Escherichia coli B str. REL606] gi|253977009|gb|ACT42679.1| glutamine ABC transporter periplasmic protein [Escherichia coli BL21(DE3)] gi|254591406|gb|ACT70767.1| glutamine transporter subunit; periplasmic binding component of ABC superfamily [Escherichia coli O157:H7 str. TW14359] gi|257752752|dbj|BAI24254.1| periplasmic glutamine-binding protein GlnH [Escherichia coli O26:H11 str. 11368] gi|257758201|dbj|BAI29698.1| periplasmic glutamine-binding protein GlnH [Escherichia coli O103:H2 str. 12009] gi|257763334|dbj|BAI34829.1| periplasmic glutamine-binding protein GlnH [Escherichia coli O111:H- str. 11128] gi|260450042|gb|ACX40464.1| cationic amino acid ABC transporter, periplasmic binding protein [Escherichia coli DH1] gi|281177947|dbj|BAI54277.1| glutamine ABC transporter substrate binding component [Escherichia coli SE15] gi|284920663|emb|CBG33726.1| glutamine ABC transporter, substrate-binding protein [Escherichia coli 042] gi|290761681|gb|ADD55642.1| hypothetical protein G2583_1039 [Escherichia coli O55:H7 str. CB9615] gi|291428697|gb|EFF01722.1| glnH [Escherichia coli FVEC1412] gi|291469655|gb|EFF12139.1| conserved hypothetical protein [Escherichia coli B354] gi|294491983|gb|ADE90739.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli IHE3034] gi|298279591|gb|EFI21099.1| glnH [Escherichia coli FVEC1302] gi|300297083|gb|EFJ53468.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 185-1] gi|300305506|gb|EFJ60026.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 200-1] gi|300316204|gb|EFJ65988.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 175-1] gi|300358006|gb|EFJ73876.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 198-1] gi|300398563|gb|EFJ82101.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 69-1] gi|300401108|gb|EFJ84646.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 84-1] gi|300406610|gb|EFJ90148.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 45-1] gi|300420868|gb|EFK04179.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 182-1] gi|300453269|gb|EFK16889.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 116-1] gi|300455283|gb|EFK18776.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 21-1] gi|300462675|gb|EFK26168.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 187-1] gi|300523246|gb|EFK44315.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 119-7] gi|300531149|gb|EFK52211.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 107-1] gi|300841068|gb|EFK68828.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 124-1] gi|300845497|gb|EFK73257.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 78-1] gi|301075515|gb|EFK90321.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 146-1] gi|305853549|gb|EFM53988.1| glutamine ABC transporter periplasmic protein [Escherichia coli NC101] gi|306906419|gb|EFN36933.1| cationic amino acid ABC transporter, periplasmic binding protein [Escherichia coli W] gi|307552656|gb|ADN45431.1| glutamine-binding periplasmic protein [Escherichia coli ABU 83972] gi|307627779|gb|ADN72083.1| glutamine ABC transporter periplasmic protein [Escherichia coli UM146] gi|308118371|gb|EFO55633.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 145-7] gi|309701089|emb|CBJ00387.1| glutamine ABC transporter, substrate-binding protein [Escherichia coli ETEC H10407] gi|310336649|gb|EFQ01816.1| glutamine-binding periplasmic protein [Escherichia coli 1827-70] gi|312286567|gb|EFR14480.1| glutamine-binding periplasmic protein [Escherichia coli 2362-75] gi|312945329|gb|ADR26156.1| glutamine ABC transporter periplasmic protein [Escherichia coli O83:H1 str. NRG 857C] gi|315060047|gb|ADT74374.1| glutamine transporter subunit [Escherichia coli W] gi|315135461|dbj|BAJ42620.1| hypothetical protein ECDH1ME8569_0764 [Escherichia coli DH1] gi|315257800|gb|EFU37768.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 85-1] gi|315287249|gb|EFU46661.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 110-3] gi|315292567|gb|EFU51919.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 153-1] gi|315299343|gb|EFU58595.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 16-3] gi|315619815|gb|EFV00334.1| glutamine-binding periplasmic protein [Escherichia coli 3431] gi|320192712|gb|EFW67353.1| Glutamine ABC transporter, periplasmic glutamine-binding protein [Escherichia coli O157:H7 str. EC1212] gi|320196693|gb|EFW71316.1| Glutamine ABC transporter, periplasmic glutamine-binding protein [Escherichia coli WV_060327] gi|320199000|gb|EFW73597.1| Glutamine ABC transporter, periplasmic glutamine-binding protein [Escherichia coli EC4100B] gi|320637674|gb|EFX07466.1| glutamine ABC transporter periplasmic protein [Escherichia coli O157:H7 str. G5101] gi|320642800|gb|EFX12001.1| glutamine ABC transporter periplasmic protein [Escherichia coli O157:H- str. 493-89] gi|320648256|gb|EFX16911.1| glutamine ABC transporter periplasmic protein [Escherichia coli O157:H- str. H 2687] gi|320654093|gb|EFX22161.1| glutamine ABC transporter periplasmic protein [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320659716|gb|EFX27272.1| glutamine ABC transporter periplasmic protein [Escherichia coli O55:H7 str. USDA 5905] gi|320664187|gb|EFX31338.1| glutamine ABC transporter periplasmic protein [Escherichia coli O157:H7 str. LSU-61] gi|323155821|gb|EFZ41990.1| glutamine-binding periplasmic protein [Escherichia coli EPECa14] gi|323159630|gb|EFZ45609.1| glutamine-binding periplasmic protein [Escherichia coli E128010] gi|323165732|gb|EFZ51518.1| glutamine-binding periplasmic protein [Shigella sonnei 53G] gi|323172272|gb|EFZ57910.1| glutamine-binding periplasmic protein [Escherichia coli LT-68] gi|323175569|gb|EFZ61164.1| glutamine-binding periplasmic protein [Escherichia coli 1180] gi|323185033|gb|EFZ70399.1| glutamine-binding periplasmic protein [Escherichia coli 1357] gi|323190939|gb|EFZ76206.1| glutamine-binding periplasmic protein [Escherichia coli RN587/1] gi|323379394|gb|ADX51662.1| cationic amino acid ABC transporter, periplasmic binding protein [Escherichia coli KO11] gi|323938166|gb|EGB34426.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli E1520] gi|323942684|gb|EGB38849.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli E482] gi|323947103|gb|EGB43115.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli H120] gi|323953526|gb|EGB49392.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli H252] gi|323958100|gb|EGB53809.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli H263] gi|323963058|gb|EGB58629.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli H489] gi|323967413|gb|EGB62834.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli M863] gi|323969549|gb|EGB64838.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli TA007] gi|323976803|gb|EGB71891.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli TW10509] gi|324009685|gb|EGB78904.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 57-2] gi|324013078|gb|EGB82297.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 60-1] gi|324018492|gb|EGB87711.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 117-3] gi|324116235|gb|EGC10157.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli E1167] gi|326338301|gb|EGD62130.1| Glutamine ABC transporter, periplasmic glutamine-binding protein [Escherichia coli O157:H7 str. 1125] gi|326346279|gb|EGD70017.1| Glutamine ABC transporter, periplasmic glutamine-binding protein [Escherichia coli O157:H7 str. 1044] gi|327253598|gb|EGE65227.1| glutamine-binding periplasmic protein [Escherichia coli STEC_7v] gi|330910555|gb|EGH39065.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Escherichia coli AA86] gi|331044782|gb|EGI16909.1| glutamine-binding periplasmic protein (GlnBP) [Escherichia coli M605] gi|331050098|gb|EGI22156.1| glutamine-binding periplasmic protein (GlnBP) [Escherichia coli M718] gi|331060590|gb|EGI32554.1| glutamine-binding periplasmic protein (GlnBP) [Escherichia coli TA143] gi|331070512|gb|EGI41876.1| glutamine-binding periplasmic protein (GlnBP) [Escherichia coli TA280] gi|331075238|gb|EGI46536.1| glutamine-binding periplasmic protein (GlnBP) [Escherichia coli H591] gi|331079949|gb|EGI51128.1| glutamine-binding periplasmic protein (GlnBP) [Escherichia coli H299] gi|332104697|gb|EGJ08043.1| periplasmic glutamine-binding protein [Shigella sp. D9] Length = 248 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 52/267 (19%), Positives = 90/267 (33%), Gaps = 23/267 (8%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K L + L F S A L +T V F + + + GFDV Sbjct: 1 MKSVLKVSLAALTLAFAVSSHAADK--------KLVVATDTAFVPFEFKQGD-KYVGFDV 51 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D A++ + D + P++ ALQ+K +D+ T R+ ++ + Sbjct: 52 DLWAAIAKELKLD---YELKPMDFSGIIPALQTKNVDLALAGITITDERKKAIDFSDG-- 106 Query: 122 TYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G ++ + SV L G + V++GT + DY KA+ F ++ Sbjct: 107 YYKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNID 162 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +R DA D + T + + D + A +G E + Sbjct: 163 NAYMELGTNRADAVLHDTPNILYFIKTAGN-GQFKAVGDSLEAQQYGIAFPKGSDELRDK 221 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKD 267 V+ T E G + + Sbjct: 222 VNGALK---TLRENGTYNEIYKKWFGT 245 >gi|296273473|ref|YP_003656104.1| family 3 extracellular solute-binding protein [Arcobacter nitrofigilis DSM 7299] gi|296097647|gb|ADG93597.1| extracellular solute-binding protein family 3 [Arcobacter nitrofigilis DSM 7299] Length = 249 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 45/266 (16%), Positives = 109/266 (40%), Gaps = 17/266 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M+ SI+ LI+L S+S + +I G+++ G++ + F + +G GFD Sbjct: 1 MHTTIMKSIIILILLVQYSYSKS---FKEILNDGYIRVGVSYDYIPFGFINNDGILDGFD 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + + + +++++ +++ + L ++DIL ++ + + F Sbjct: 58 IDLIKRMMNKL---ELRVKFIEVSSTNKEKMLLDDKLDILFAGMS--KDKQSNKNIIFTK 112 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y D Q +++ K + ++ + + GT F + F + Sbjct: 113 PYYTDEQVILLNSNKNVKTLKDMDNMHVGSLKGTNYLTN----FLKIQPNVLTVSFSQYP 168 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 ++ A + DA T S +A + P+E IL D+I + + A+ + + + Sbjct: 169 QLTKALAYNNIDAVTAGSS--WAKEQVESHPNEFRILSDVICQINYSMALKKSNEDLKEK 226 Query: 241 VSWTHYAMVTAEELGITQKNINQVSK 266 ++ + ++ +K + K Sbjct: 227 LN---LLFIESKNDNSYEKIYQKWFK 249 >gi|227823074|ref|YP_002827046.1| putative solute-binding component of ABC transporter [Sinorhizobium fredii NGR234] gi|227342075|gb|ACP26293.1| putative solute-binding component of ABC transporter [Sinorhizobium fredii NGR234] Length = 264 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 47/271 (17%), Positives = 96/271 (35%), Gaps = 18/271 (6%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 ++L + A + DIK G + GI + F+ A+ KG+DVD Sbjct: 6 KLKAMFTAALMLGAATGMARADAVDDIKAAGQINVGIFSDFPPFSSASADMSIKGYDVDV 65 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 + ++ A+ ++ + + + R L K++DIL +E + + F Sbjct: 66 AQQIADALG---VRLNLVSVTGQNRIPYLNDKRVDIL---MSVGYSKERAEVIDFAAAYA 119 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 I + ++ L+ +I V GT + +L + A F+ + Sbjct: 120 PYYIAVIGPAELKVAGKEDLADKTIAVNRGTLEDTSLTEAAPA---SASIQRFDNYNAVI 176 Query: 184 AAYRAHRCDAYT--GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A+ + + D+ A + +P + + SP + + + V Sbjct: 177 QAFISGQTQLMVVGNDVGAQVLARQEALKPEQ----KFQLLTSPSHIGLNKNEERLKQSV 232 Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPD 272 + T M+ +L + + K NPD Sbjct: 233 NDTVAKMLADGKLNESSQ---AWLKTPLNPD 260 >gi|295693562|ref|YP_003602172.1| amino acid ABC transporter, amino acid-binding protein [Lactobacillus crispatus ST1] gi|295031668|emb|CBL51147.1| Amino acid ABC transporter, amino acid-binding protein [Lactobacillus crispatus ST1] Length = 271 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 51/284 (17%), Positives = 99/284 (34%), Gaps = 21/284 (7%) Query: 2 YKDFFVSILCLIILFFTSF------STNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 K + + I IILF T + I + + G++ V K NG Sbjct: 1 MKKWILGIALAIILFLTGCQSVQKEANTQDTWNKIASKKQVVIGLDDSFVPMGFEKKNGQ 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G+D+D +A+ K+ + ++ L++ ID+L T R+ + Sbjct: 61 LTGYDIDLAKAVFRQYG---IKVSFQTVDWSMNVTELRNGTIDLLWNGYSITPERKKKVA 117 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + Q ++ K GI S Q+ + +Q G+T E + K ++ Sbjct: 118 F--SKPYLRNRQVLVVKKDSGIRSFKQMKQYELGMQTGSTAEQWYETKQDVLHAK-KTVL 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP-DIISKSPLAPAIIQGD 234 ++ + A R D + SE+ ++ D + A + +GD Sbjct: 175 YDTISNSFLDLNAGRIQGILLDEVYADYYIAHMAKSSEYKVIQNDRVPMDLFAVGMRKGD 234 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLG 278 V+ +V ++ G +K + +N +LG Sbjct: 235 KTLRKRVN---EGLVKLQKNGQLRKLNKKWFDRNSN-----WLG 270 >gi|260461492|ref|ZP_05809739.1| extracellular solute-binding protein family 3 [Mesorhizobium opportunistum WSM2075] gi|259032562|gb|EEW33826.1| extracellular solute-binding protein family 3 [Mesorhizobium opportunistum WSM2075] Length = 290 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 45/246 (18%), Positives = 86/246 (34%), Gaps = 12/246 (4%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S+L + RG L G + + G+ G D+ R L+ +FDDP+K++++ + Sbjct: 40 SLLRTVLDRGKLIVGTGSTNAPWHFENDAGELVGMDITMGRILAKGLFDDPTKVEFVMQD 99 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL- 143 +R + + ++DI + T R S + F Y +G + + +L Sbjct: 100 PAQRIPNVTTNKVDITIQFMTMTAQR--SQLINFTRPYYVEGVALLTLPNAENKTFDKLL 157 Query: 144 ---SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 S I + E ++ + + + A + R DA D+S Sbjct: 158 AGGSATRISILQNVDAETSVHYALPQAQ----VMQIDTQANVLQALESKRVDAAAVDLST 213 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 + L + P ++ A+ QGD +W V T + E + Sbjct: 214 VRWLA--SRNPDKYFDAGKSWYSMLYGAALRQGDLDWLTFVDQTFTIAMFGHESALYDAA 271 Query: 261 INQVSK 266 Sbjct: 272 FKDYFG 277 >gi|288574034|ref|ZP_06392391.1| extracellular solute-binding protein family 3 [Dethiosulfovibrio peptidovorans DSM 11002] gi|288569775|gb|EFC91332.1| extracellular solute-binding protein family 3 [Dethiosulfovibrio peptidovorans DSM 11002] Length = 257 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 54/256 (21%), Positives = 96/256 (37%), Gaps = 26/256 (10%) Query: 1 MYKDF----FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINT-GLVGFAEVKANGD 55 M+K F+S + L + S + L DI KRG + + F V +GD Sbjct: 4 MFKTSASVRFISSVFLTVFLSASCAWAGDRLDDIVKRGEMVVAVGDFENEPFFFV-EDGD 62 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS------KQIDILSRNTDWTLL 109 GFDVD R ++ I D ++++ + AL + D+ + Sbjct: 63 LVGFDVDLGRMIAKEIGVD---VRFVRVPWDGLI-ALAWYSRYPWSRYDMAIASITIRQS 118 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 R + ++ GQ ++ ++ G + L G +I V AG+T T A Sbjct: 119 RTRACDF--SDWYFYTGQKLLVREEDGYETPLDLEGKTIAVMAGSTGYETAKRDLAAQT- 175 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 +V + +E A RA R D D + + A +R V L +++ Sbjct: 176 ----VVMDSPQETVDALRAGRVDGALSDATIVIA---AAERYDGLVALEGMVTTERYGVV 228 Query: 230 IIQGDTEWYNIVSWTH 245 + +G+ + +V Sbjct: 229 LPKGEEDLRKVVDSVV 244 >gi|227818838|ref|YP_002822809.1| amino acid ABC transporter substrate-binding protein [Sinorhizobium fredii NGR234] gi|36959096|gb|AAQ87521.1| Amino-acid binding protein [Sinorhizobium fredii NGR234] gi|227337837|gb|ACP22056.1| probable amino acid ABC transporter, substrate-binding protein [Sinorhizobium fredii NGR234] Length = 274 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 48/263 (18%), Positives = 93/263 (35%), Gaps = 13/263 (4%) Query: 2 YKDFF-VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + F +++ + + + +A+ + +IK +G L GI + V +G GFD Sbjct: 5 RRSFLGLALATVAFATVGAAAASAASVEEIKAKGTLVVGIQGDNAPWGFVNTSGVQDGFD 64 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D + + K+Q+ PL R AL + ++DIL T R S+ Sbjct: 65 ADVANLFAKELG---VKVQFQPLAVANRIPALTTGKVDILFATMAMTEERAKSIQY--SK 119 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + K ++ ++G I V ++ + + D A F+ Sbjct: 120 PYAANTISLYAAKSDTVTKPEDVAGWEIGVPKSSSQDKAVTD---AVGSTATVRRFDDDA 176 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A + + A G+ Y +L + D ++ G+ +W Sbjct: 177 ATIQALISGQVKAVGGN--QFYGQRLDAASAGTYERKIDFLTT-YNGVGTRLGEKDWNEA 233 Query: 241 VSWTHYAMVTAEEL-GITQKNIN 262 V+ + EL IT+K + Sbjct: 234 VNVFIDKIKANGELAAITKKWME 256 >gi|200389730|ref|ZP_03216341.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199602175|gb|EDZ00721.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 245 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 51/267 (19%), Positives = 94/267 (35%), Gaps = 28/267 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ T ++ F + AN GFD Sbjct: 3 MKKVLIAALIAGFSLSATAAQT-------------IRFATEASYPPFESMDANNKIVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL I + + +L+ ++ D + D T RE + Sbjct: 50 VDLANALCKEIDASCT---FTNQAFDSLIPSLKFRRFDAVMAGMDITPEREKQVLFT--- 103 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+D + ++ +SV QL G + VQ GTT + + D + + + ++ + Sbjct: 104 TPYYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFIMD----KHPEITTVPYDSYQ 159 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R DA GD + + N + P + + L A+ QG+TE Sbjct: 160 NAKLDLQNGRIDAVFGDTAVVTEWLKANPKLVPVGDKVTDKDYFGTGLGIAVRQGNTELQ 219 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVS 265 + A+ ++ G + N+ Sbjct: 220 QKFN---TALEKVKKDGTYETIYNKWF 243 >gi|329770428|ref|ZP_08261810.1| hypothetical protein HMPREF0433_01574 [Gemella sanguinis M325] gi|328836551|gb|EGF86211.1| hypothetical protein HMPREF0433_01574 [Gemella sanguinis M325] Length = 273 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 45/277 (16%), Positives = 104/277 (37%), Gaps = 23/277 (8%) Query: 1 MYKD--FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANGD 55 M K F SI+ + L S S++ + L ++K +G + G++ + + N Sbjct: 1 MKKLILFITSIITVFTLTACSSSSSKNKLEEVKSKGKIVLGVSPDYAPYEFLTTENGNKK 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G D+ ++ + +++ + +L + ++D++ + T R+ ++ Sbjct: 61 VVGADIYLAEQIAKKL---DVEVEIQEMGFDSLIASLNANKVDMVISGINPTDERKKAVD 117 Query: 116 LAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + Y F+++K I SV L + VQ G+T E + K + + Sbjct: 118 F--SDVYYTGKGIFVVNKDSDEIKSVDDLKNKKVGVQKGSTYETYAKEQLKIA--ESNIQ 173 Query: 175 VFERVEEIDAAYRAHRCDAY-TGDISALYALKLTNDRPSEHVILPDIISKSP----LAPA 229 V + + + D D A K+ ++ S+ I P +A A Sbjct: 174 SLTDVPSLLQDLKNKKIDVVLIPDDVA----KIAMNKYSDIKISSFTADNDPEATGMAIA 229 Query: 230 IIQ-GDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 + D ++ + + +E +K +++ + Sbjct: 230 FKKGKDDSNKELLEQVNSVIKEIQEKKEFEKQLDKYA 266 >gi|227878270|ref|ZP_03996234.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus crispatus JV-V01] gi|256844164|ref|ZP_05549651.1| ABC transporter [Lactobacillus crispatus 125-2-CHN] gi|256850464|ref|ZP_05555891.1| amino acid ABC transporter [Lactobacillus crispatus MV-1A-US] gi|262047797|ref|ZP_06020748.1| amino acid ABC transporter substrate-binding protein [Lactobacillus crispatus MV-3A-US] gi|293381401|ref|ZP_06627400.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus crispatus 214-1] gi|312976723|ref|ZP_07788472.1| glutamine ABC transporter, substrate binding protein [Lactobacillus crispatus CTV-05] gi|227862140|gb|EEJ69695.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus crispatus JV-V01] gi|256614069|gb|EEU19271.1| ABC transporter [Lactobacillus crispatus 125-2-CHN] gi|256712669|gb|EEU27663.1| amino acid ABC transporter [Lactobacillus crispatus MV-1A-US] gi|260571926|gb|EEX28496.1| amino acid ABC transporter substrate-binding protein [Lactobacillus crispatus MV-3A-US] gi|290922009|gb|EFD99012.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus crispatus 214-1] gi|310896051|gb|EFQ45116.1| glutamine ABC transporter, substrate binding protein [Lactobacillus crispatus CTV-05] Length = 271 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 44/260 (16%), Positives = 86/260 (33%), Gaps = 12/260 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTN-----ASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K +L L + S I + + G++ V K NG Sbjct: 1 MKKWILGIVLALTLCLTGCQSVQKEANTQDTWNKIASKKQVVIGLDDSFVPMGFEKKNGQ 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G+D+D +A+ K+ + ++ L++ ID+L T R+ + Sbjct: 61 LTGYDIDLAKAVFKQYG---IKVSFQTIDWSMNVTELRNGTIDLLWNGYSITPERQKKVA 117 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + Q ++ K ISS Q+ + +Q G+T E + K ++ Sbjct: 118 F--SKPYLRNRQVLVVKKDSDISSFKQMKNYELGMQTGSTAEQWYETKQDVLHAK-KTVL 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP-DIISKSPLAPAIIQGD 234 ++ + A R D + SE+ ++ D + A + +GD Sbjct: 175 YDTISNSFLDLNAGRIQGILLDEVYADYYIAHMAKSSEYKVIQNDRVPMDLFAVGMRKGD 234 Query: 235 TEWYNIVSWTHYAMVTAEEL 254 V+ + +L Sbjct: 235 KTLRQKVNQGLAKLQKNGQL 254 >gi|56414020|ref|YP_151095.1| arginine-binding periplasmic protein 1 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197362943|ref|YP_002142580.1| arginine-binding periplasmic protein 1 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56128277|gb|AAV77783.1| arginine-binding periplasmic protein 1 precursor [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197094420|emb|CAR59936.1| arginine-binding periplasmic protein 1 precursor [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 243 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 51/267 (19%), Positives = 94/267 (35%), Gaps = 28/267 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ T ++ F + AN GFD Sbjct: 1 MKKVLIAALIAGFSLSATAAQT-------------IRFATEASYPPFESMDANNKIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL I + + +L+ ++ D + D T RE + Sbjct: 48 VDLANALCKEIDASCT---FTNQAFDSLIPSLKFRRFDAVMAGMDITPEREKQVLFT--- 101 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+D + ++ +SV QL G + VQ GTT + + D + + + ++ + Sbjct: 102 TPYYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFIMD----KHPEITTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R DA GD + + N + P + + L A+ QG+TE Sbjct: 158 NAKLDLQNGRIDAVFGDTAVVTEWLKANPKLVPVGDKVTDKDYFGTGLGIAVRQGNTELQ 217 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVS 265 + A+ ++ G + N+ Sbjct: 218 QKFN---TALEKVKKDGTYETIYNKWF 241 >gi|158314294|ref|YP_001506802.1| extracellular solute-binding protein [Frankia sp. EAN1pec] gi|158109699|gb|ABW11896.1| extracellular solute-binding protein family 3 [Frankia sp. EAN1pec] Length = 338 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 48/237 (20%), Positives = 96/237 (40%), Gaps = 19/237 (8%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDP---SK 77 + L I+KRGFL+ G++ + ++GFDV+ + ++ A+F K Sbjct: 72 ASGGSLDKIRKRGFLRVGVSRDTQTRGAWSPVSHRFEGFDVELAQRIAEALFGPGTADEK 131 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-- 135 ++Y P++ ER A+++ ++DIL ++ R +GL+ + + H++ Sbjct: 132 VRYRPVSYAERLPAVENGEVDILVSTLTYSESRAERVGLSAA--YFTAHPRLLSHRESTH 189 Query: 136 -----GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190 GI S +L+G +C GTTT L + + H + + A++ Sbjct: 190 SGAGPGIDSPEELAGKRVCAPRGTTTLTNLENTHQTHPTFEIVDHLNELSDCLVAFQQGE 249 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILP--DIISKSPLAPAIIQGDTEWYNIVSWTH 245 D + ++L + +L + + A + DTE V+ Sbjct: 250 VDVVAANDASLVGMLEQ----DATAVLGTFSVGRDEYYSVAFERDDTELAGFVNGVL 302 >gi|239618042|ref|YP_002941364.1| extracellular solute-binding protein family 3 [Kosmotoga olearia TBF 19.5.1] gi|239506873|gb|ACR80360.1| extracellular solute-binding protein family 3 [Kosmotoga olearia TBF 19.5.1] Length = 259 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 45/241 (18%), Positives = 93/241 (38%), Gaps = 19/241 (7%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 T S++ +IK+RG L+ G + G + G+ G +VD + +++ + +++++ Sbjct: 20 TFGSLIDEIKERGVLRVGQDAGYMPLYGTDMYGNRIGLEVDVLKIMATLLG---VRLEFV 76 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM--HKKKGISS 139 +N AL S++ DI+ T R + + GQ + K + S Sbjct: 77 VVNWDGIIPALLSEKFDIIWSGMTITDERAKKVDFSE--PYLKIGQVLVYNNRKISSVPS 134 Query: 140 VSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + +L+ I VQ GTT + F + F+ ++E + R D D Sbjct: 135 LEELNNPSVRIAVQLGTTGDEAARRLFPRA----KILTFDSMDEAAFQVASGRADFTVVD 190 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 + + + ++ L AI + D E ++W + + + G Sbjct: 191 S---IYAQYVAKKYDRLSVADGFLTSEELGVAIRKNDPE---TLNWINNFIEGLKSSGFM 244 Query: 258 Q 258 + Sbjct: 245 E 245 >gi|332041198|gb|EGI77563.1| extracellular solute-binding protein [Hylemonella gracilis ATCC 19624] Length = 264 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 40/263 (15%), Positives = 82/263 (31%), Gaps = 11/263 (4%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 ++ L L + + L G + F A G+ GFD+D Sbjct: 10 TLKLAALVLAGFAIAGLAACGKK-EEAAPAKALVVGTDAAYAPFESQDAQGNIVGFDIDV 68 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 +A+++ + +++++ + F L D+L T R+ ++ + Sbjct: 69 VKAIAA---NQGLEVKFVNTPWEGIFNTLAQGDRDLLVSAITITAERKQTMDF--SNPYF 123 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 Q + +K ++ + + + VQ GTT + + + FE Sbjct: 124 DAKQLIAVAEKSTVTKFADIKTLKVGVQTGTTGDDVVQGLLGKDSANIK--RFESTPLAL 181 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 A A D + N + D + A+ +G+TE ++ Sbjct: 182 KELEAGGVQAVVADNGVVENYVNNNANFKFKTVSDDSFTPEQYGIAVRKGNTELLEKINK 241 Query: 244 THYAMVTAEELGITQKNINQVSK 266 A+ G K Q Sbjct: 242 GLAAIKA---DGTYAKIHAQWFG 261 >gi|16331484|ref|NP_442212.1| hypothetical protein sll0064 [Synechocystis sp. PCC 6803] gi|1001140|dbj|BAA10282.1| sll0064 [Synechocystis sp. PCC 6803] Length = 275 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 53/264 (20%), Positives = 97/264 (36%), Gaps = 16/264 (6%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 ++++ L + ++L + + G L+ G T V F ANG+ +G+ VD Sbjct: 9 WLALTFTTGLVAIAPVQAETVLERVARTGELRAGTRTDAVPFGFEMANGEMEGYGVDLMA 68 Query: 66 ALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 ++ + + ++ + RF A+ S ++DI+ T T + + F Sbjct: 69 LIALKLAEEMGKTITVDLDRVDLQSRFEAIASGELDIVCEATTITQ--DRLELVDFSAPF 126 Query: 123 YFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + G F+M + G + L G I TTT + + + + E Sbjct: 127 FISGAKFLMKQGSVEGFNINGTLEGIPIAYIQNTTTFDIIPKIYPLAQW----VPVQDRE 182 Query: 181 EIDAAYRAHRCDAYTGDISALYA-LKLTNDRPSEHVILP-DIISKSPLAPAIIQGDTEWY 238 E A + A D L L P+E+ + P I+ A + QGD +W Sbjct: 183 EGIAKLDGGQVKAVVSDGILLVGELLKQGKNPAEYALGPYQPITTELYACILPQGDGDWK 242 Query: 239 NIVSWTHYAMVTAEELGITQKNIN 262 V + E + Q+ N Sbjct: 243 RFVDEVISST---ENHDLLQEWFN 263 >gi|224582740|ref|YP_002636538.1| arginine-binding periplasmic protein 1 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224467267|gb|ACN45097.1| arginine-binding periplasmic protein 1 precursor [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 245 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 51/267 (19%), Positives = 94/267 (35%), Gaps = 28/267 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ T ++ F + AN GFD Sbjct: 3 MKKVLIAALIAGFSLSATAAQT-------------IRFATEASYPPFESMDANNKIVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL I + + +L+ ++ D + D T RE + Sbjct: 50 VDLANALCKEIDASCT---FTNQAFDSLIPSLKFRRFDAVMAGMDITPEREKQVLFT--- 103 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+D + ++ +SV QL G + VQ GTT + + D + + + ++ + Sbjct: 104 TPYYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFIMD----KHQEITTVPYDSYQ 159 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R DA GD + + N + P + + L A+ QG+TE Sbjct: 160 NAKLDLQNGRIDAVFGDTAVVTEWLKANPKLAPVGDKVTDKDYFGTGLGIAVRQGNTELQ 219 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVS 265 + A+ ++ G + N+ Sbjct: 220 QKFN---TALEKVKKDGTYETIYNKWF 243 >gi|161614845|ref|YP_001588810.1| hypothetical protein SPAB_02598 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194444543|ref|YP_002040128.1| arginine ABC transporter periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|197248178|ref|YP_002145843.1| arginine ABC transporter periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|161364209|gb|ABX67977.1| hypothetical protein SPAB_02598 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194403206|gb|ACF63428.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|197211881|gb|ACH49278.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|326622607|gb|EGE28952.1| Bacterial extracellular solute-binding protein, family 3 [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326627182|gb|EGE33525.1| Bacterial extracellular solute-binding protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 245 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 51/267 (19%), Positives = 94/267 (35%), Gaps = 28/267 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ T ++ F + AN GFD Sbjct: 3 MKKVLIAALIAGFSLSATAAQT-------------IRFATEASYPPFESMDANNKIVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL I + + +L+ ++ D + D T RE + Sbjct: 50 VDLANALCKEIDASCT---FTNQAFDSLIPSLKFRRFDAVMAGMDITPEREKQVLFT--- 103 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+D + ++ +SV QL G + VQ GTT + + D + + + ++ + Sbjct: 104 TPYYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFIMD----KHPEITTVPYDSYQ 159 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R DA GD + + N + P + + L A+ QG+TE Sbjct: 160 NAKLDLQNGRIDAVFGDTAVVTEWLKANPKLAPVGDKVTDKDYFGTGLGIAVRQGNTELQ 219 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVS 265 + A+ ++ G + N+ Sbjct: 220 QKFN---TALEKVKKDGTYETIYNKWF 243 >gi|126458803|ref|YP_001055081.1| extracellular solute-binding protein [Pyrobaculum calidifontis JCM 11548] gi|126248524|gb|ABO07615.1| extracellular solute-binding protein, family 3 [Pyrobaculum calidifontis JCM 11548] Length = 299 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 49/250 (19%), Positives = 91/250 (36%), Gaps = 8/250 (3%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 + S + IKKRG L G + + V+ N + G+D+D R ++ A+ ++ Sbjct: 57 AASQCPVSVDVIKKRGKLILGTDATWPPWEWVRGN-EIVGWDIDIAREIAKALG---VQL 112 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + + A+++ +D+ WT RE L + P + K+ I+ Sbjct: 113 EVRDMRFAGLLEAVRNGDVDLALSAITWTSEREKVLEFSM-PYYLESVVVVTLAKRTDIN 171 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 V L G ++ VQ GTT E A+ + + + R DA D Sbjct: 172 RVEDLYGKTVGVQIGTTHEEWAAENLEKPGKAAVRRYDKVYPYMVEVLRRGDVDAIILDR 231 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-IT 257 S AL P + + ++ A+ + + +V ++ L I Sbjct: 232 SIATALVRKF--PDLKISFEIPGTAGYISVAMPKCAQDLKLVVDQVIENLMQTGRLDEIF 289 Query: 258 QKNINQVSKD 267 Q+N + Sbjct: 290 QRNFELFLQS 299 >gi|24112179|ref|NP_706689.1| glutamine ABC transporter periplasmic protein [Shigella flexneri 2a str. 301] gi|30062295|ref|NP_836466.1| glutamine ABC transporter periplasmic protein [Shigella flexneri 2a str. 2457T] gi|110804811|ref|YP_688331.1| glutamine ABC transporter periplasmic protein [Shigella flexneri 5 str. 8401] gi|24051019|gb|AAN42396.1| periplasmic glutamine-binding protein; permease [Shigella flexneri 2a str. 301] gi|30040540|gb|AAP16272.1| periplasmic glutamine-binding protein; permease [Shigella flexneri 2a str. 2457T] gi|110614359|gb|ABF03026.1| periplasmic glutamine-binding protein [Shigella flexneri 5 str. 8401] gi|281600136|gb|ADA73120.1| Periplasmic glutamine-binding protein; permease [Shigella flexneri 2002017] gi|313650288|gb|EFS14700.1| glutamine-binding periplasmic protein [Shigella flexneri 2a str. 2457T] Length = 248 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 54/271 (19%), Positives = 93/271 (34%), Gaps = 25/271 (9%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K L + L F S A L +T V F + + + GFDV Sbjct: 1 MKSVLKVSLAALTLAFAVSSHAADK--------KLVVATDTAFVPFEFKQGD-KYVGFDV 51 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D A++ + D + P++ ALQ+K +D+ T R+ ++ + Sbjct: 52 DLWAAIAKELKLD---YELKPMDFSGIIPALQTKNVDLALAGITITDERKKAIDFSDG-- 106 Query: 122 TYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G ++ + SV L G + V++GT + DY KA+ F ++ Sbjct: 107 YYKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNID 162 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +R DA D + T + + D + A +G E + Sbjct: 163 NAYMELGTNRADAVLHDTPNILYFIKTAGN-GQFKAVGDSLEAQQYGIAFPKGSDELRDK 221 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 V+ T E G + + +T P Sbjct: 222 VNGALK---TLRENGTYNEIYKKWF--STEP 247 >gi|291484836|dbj|BAI85911.1| hypothetical protein BSNT_03569 [Bacillus subtilis subsp. natto BEST195] Length = 255 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 52/259 (20%), Positives = 98/259 (37%), Gaps = 11/259 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + I ++ ++ S KK+ L G + F + + + GFD Sbjct: 1 MKKWLLLLVAACITFALSACGSSNSGSEGGKKK--LIMGTSADYKPFEYKEGD-NIVGFD 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ +AL+ + I+ ++ AL+SKQ+D++ T R+ + Sbjct: 58 VELAKALAKKAGYE---IEVQDMDFNSLITALKSKQVDLVLSGMTPTPERKKQVDF--SD 112 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y + K GI S+ L G ++ VQ G+ E + + K R+ Sbjct: 113 VYYTANHMIVSKKDSGIQSLKDLKGKTVGVQLGSIQEEKGKELSPEYGFKTEDR--NRIS 170 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 ++ ++ R DA + +ND VI ++ A A + D+E + Sbjct: 171 DLVQEIKSDRFDAAIIEDIVAEGYFKSNDDLQGFVIPDAKAEEAGSAIAFRK-DSELTDK 229 Query: 241 VSWTHYAMVTAEELGITQK 259 + M EL +K Sbjct: 230 FNKALKEMEDNGELEKLKK 248 >gi|260597204|ref|YP_003209775.1| glutamine ABC transporter periplasmic protein [Cronobacter turicensis z3032] gi|260216381|emb|CBA29431.1| Glutamine-binding periplasmic protein [Cronobacter turicensis z3032] Length = 293 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 51/267 (19%), Positives = 91/267 (34%), Gaps = 24/267 (8%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K F L + L F S A L +T V F + + + GFDV Sbjct: 47 MKSVFKVSLAALTLAFAVSSQAAD---------KLVVATDTAFVPFEFKQGD-KYVGFDV 96 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D A++ + D P++ ALQ+K +D+ T R+ ++ + Sbjct: 97 DLWAAIAKELKLD---YTLKPMDFSGIIPALQTKNVDVALAGITITDERKKAIDFSDG-- 151 Query: 122 TYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G ++ + SV L G + V++GT + DY KA+ F ++ Sbjct: 152 YYTSGLLVMVKANNNDVKSVKDLDGKVLAVKSGTGSV----DYAKANIKTKDLRQFPNID 207 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +R DA D + T + + + ++ A +G + N Sbjct: 208 NAYMELGTNRADAVLHDTPNILYFIKTAGN-GQFKAVGESLAGQQYGIAFPKGSDDLRNK 266 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKD 267 V+ +E G + + Sbjct: 267 VNGALK---NLKENGTYNEIYKKWFGT 290 >gi|16759800|ref|NP_455417.1| arginine-binding periplasmic protein 1 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16764251|ref|NP_459866.1| arginine transport system [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167992143|ref|ZP_02573241.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168230797|ref|ZP_02655855.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168236835|ref|ZP_02661893.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168240771|ref|ZP_02665703.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168263590|ref|ZP_02685563.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168466508|ref|ZP_02700370.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168819946|ref|ZP_02831946.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194451374|ref|YP_002044920.1| arginine ABC transporter periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194472996|ref|ZP_03078980.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194735976|ref|YP_002113983.1| arginine ABC transporter periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197264800|ref|ZP_03164874.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|198245831|ref|YP_002214854.1| arginine ABC transporter periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|204929825|ref|ZP_03220846.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205352139|ref|YP_002225940.1| arginine-binding periplasmic protein 1 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|213021407|ref|ZP_03335854.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] gi|213052700|ref|ZP_03345578.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213418750|ref|ZP_03351816.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213428039|ref|ZP_03360789.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213580628|ref|ZP_03362454.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213609524|ref|ZP_03369350.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213647845|ref|ZP_03377898.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|238913407|ref|ZP_04657244.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289804213|ref|ZP_06534842.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Typhi str. AG3] gi|289825016|ref|ZP_06544379.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25296354|pir||AG0607 arginine-binding periplasmic protein 1 precursor [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16419398|gb|AAL19825.1| arginine transport system [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16502093|emb|CAD05329.1| arginine-binding periplasmic protein 1 precursor [Salmonella enterica subsp. enterica serovar Typhi] gi|194409678|gb|ACF69897.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194459360|gb|EDX48199.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194711478|gb|ACF90699.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195630902|gb|EDX49488.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197243055|gb|EDY25675.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197290097|gb|EDY29454.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197940347|gb|ACH77680.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|204320819|gb|EDZ06020.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205271920|emb|CAR36763.1| arginine-binding periplasmic protein 1 precursor [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205329600|gb|EDZ16364.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205334641|gb|EDZ21405.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205339789|gb|EDZ26553.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205343109|gb|EDZ29873.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205347815|gb|EDZ34446.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|261246145|emb|CBG23948.1| arginine-binding periplasmic protein 1 precursor [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267992652|gb|ACY87537.1| arginine transport system [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|312911917|dbj|BAJ35891.1| arginine ABC transporter substrate binding protein ArtI [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320085164|emb|CBY94951.1| Arginine-binding periplasmic protein Flags: Precursor [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321223251|gb|EFX48320.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322616364|gb|EFY13273.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322619614|gb|EFY16489.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622690|gb|EFY19535.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628602|gb|EFY25389.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631539|gb|EFY28295.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322637066|gb|EFY33769.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641735|gb|EFY38371.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644472|gb|EFY41012.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650067|gb|EFY46484.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322654140|gb|EFY50463.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658055|gb|EFY54322.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322663529|gb|EFY59731.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322670265|gb|EFY66405.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322671501|gb|EFY67623.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676857|gb|EFY72924.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682782|gb|EFY78801.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686461|gb|EFY82443.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323196085|gb|EFZ81248.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323196769|gb|EFZ81913.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202952|gb|EFZ87986.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208992|gb|EFZ93929.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323211897|gb|EFZ96725.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323215171|gb|EFZ99916.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323222374|gb|EGA06752.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323223890|gb|EGA08189.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229849|gb|EGA13972.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233074|gb|EGA17170.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240809|gb|EGA24851.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323243126|gb|EGA27146.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248668|gb|EGA32596.1| putative ABC transporter arginine-biding protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251669|gb|EGA35536.1| putative ABC transporter arginine-biding protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323257343|gb|EGA41041.1| putative ABC transporter arginine-biding protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323261931|gb|EGA45497.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323267947|gb|EGA51426.1| putative ABC transporter arginine-biding protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323271986|gb|EGA55401.1| putative ABC transporter arginine-biding protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 243 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 51/267 (19%), Positives = 94/267 (35%), Gaps = 28/267 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ T ++ F + AN GFD Sbjct: 1 MKKVLIAALIAGFSLSATAAQT-------------IRFATEASYPPFESMDANNKIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL I + + +L+ ++ D + D T RE + Sbjct: 48 VDLANALCKEIDASCT---FTNQAFDSLIPSLKFRRFDAVMAGMDITPEREKQVLFT--- 101 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+D + ++ +SV QL G + VQ GTT + + D + + + ++ + Sbjct: 102 TPYYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFIMD----KHPEITTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R DA GD + + N + P + + L A+ QG+TE Sbjct: 158 NAKLDLQNGRIDAVFGDTAVVTEWLKANPKLAPVGDKVTDKDYFGTGLGIAVRQGNTELQ 217 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVS 265 + A+ ++ G + N+ Sbjct: 218 QKFN---TALEKVKKDGTYETIYNKWF 241 >gi|323143937|ref|ZP_08078595.1| putative arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Succinatimonas hippei YIT 12066] gi|322416301|gb|EFY06977.1| putative arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Succinatimonas hippei YIT 12066] Length = 250 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 45/257 (17%), Positives = 84/257 (32%), Gaps = 24/257 (9%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 ++ + F + A L+ G F + N +G+D+D A+ Sbjct: 11 TLCAAAAVTFCAVQAQAE---------VLRVGTEATYAPFEFMDDNVQPQGYDIDIINAV 61 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 A+ D +Q + AL + QID++ T R + Y G Sbjct: 62 GKAMGYD---VQVQNMAFDGLIPALMTSQIDVVIAAMTITEERAKRVDFTE--PYYKSGL 116 Query: 128 GFIM--HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 ++ K ++ L +C Q GTT L KA + + F E Sbjct: 117 SILILEENKDKFKTIDDLKNERLCAQIGTTGAL------KAQEISGNVGAFNTEPEAFME 170 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 +A C D + + + + I+ A+ +G++E ++ Sbjct: 171 LKAKGCAGVVNDRPVNLYFLTKSASKG-VIEMSERITAEDYGIAVRKGNSELLKALNEGL 229 Query: 246 YAMVTAEEL-GITQKNI 261 + + E+ I QK Sbjct: 230 KKIKESGEMAKIHQKWF 246 >gi|172063791|ref|YP_001811442.1| extracellular solute-binding protein [Burkholderia ambifaria MC40-6] gi|171996308|gb|ACB67226.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MC40-6] Length = 266 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 52/256 (20%), Positives = 100/256 (39%), Gaps = 21/256 (8%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 S A +L +K+ G LK + F A G +GFDVD +A+++ + P Q+ Sbjct: 24 SHAADLLDTVKQAGVLKIALEGTYPPFDYRNAEGQLEGFDVDVAKAVAARLGVKP---QF 80 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISS 139 + LQ+ + D++ T R+ +L + P + Q + S Sbjct: 81 VTTEWSGILAGLQAGKFDVIVNQVAITPSRQQALDFSM-PYVFSSAQLLQRRNDTRAFKS 139 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + +L G + V G+ + L A +++ +P E + + A R DA D Sbjct: 140 LDELKGKKVGVTMGS-NYVDLVKTVPAIDLQVYPGTPENLRD----LAAGRIDAAVNDRL 194 Query: 200 ALYALKLTND---RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 L L + RP + + + +G+ ++ + A+ + ++ G Sbjct: 195 MLSYLIKNSHLPLRPGSVLAGGE----DRMGIPFRKGNPKFAKAIDD---AVASLQQDGT 247 Query: 257 TQK-NINQVSKDTTNP 271 +K ++ DTT P Sbjct: 248 LKKISMQWFGTDTTRP 263 >gi|25028401|ref|NP_738455.1| glutamate-binding protein GluB [Corynebacterium efficiens YS-314] gi|24636878|sp|Q8RQL6|GLUB_COREF RecName: Full=Glutamate-binding protein; Flags: Precursor gi|20126698|dbj|BAB88899.1| gluB [Corynebacterium efficiens] gi|23493686|dbj|BAC18655.1| glutamate-binding protein GluB [Corynebacterium efficiens YS-314] Length = 294 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 40/251 (15%), Positives = 80/251 (31%), Gaps = 19/251 (7%) Query: 13 IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72 I L S L + G + G G + G DVD + + ++I Sbjct: 22 ITLTACGDSEGGDGLLAAIENGNVTIGTKYDQPGLGLRNPDNSMSGLDVDVAQYVVNSIA 81 Query: 73 DDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 DD +++ + +R +Q+ ++D+++ R S + F Q Sbjct: 82 DDNGWDHPTVEWRETPSAQRETLIQNGEVDMIAATYSINPGR--SESVNFGGPYLLTHQA 139 Query: 129 FIMH-KKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 ++ I ++ L G +C G+T + D ++ A Sbjct: 140 LLVREDDDRIQTLEDLDDGLILCSVTGSTPAQKVKDVLP----GVQLQEYDTYSSCVEAL 195 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVIL-----PDIISKSPLAPAIIQGDTEWYNIV 241 DA T D + L+ + E ++ + + I + DTE + + Sbjct: 196 SQGNVDAMTTDATILFGYAQQRE--GEFRVVEMEQDGEPFTNEYYGIGITKDDTEATDAI 253 Query: 242 SWTHYAMVTAE 252 + M Sbjct: 254 NAALERMYADG 264 >gi|331267208|ref|YP_004326838.1| ABC transporter substrate-binding protein [Streptococcus oralis Uo5] gi|326683880|emb|CBZ01498.1| ABC transporter substrate-binding protein [Streptococcus oralis Uo5] Length = 268 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 49/273 (17%), Positives = 95/273 (34%), Gaps = 19/273 (6%) Query: 3 KDFFVSILCLII--LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWK 57 K +++ L++ L F +T + + IK +G L +N F V Sbjct: 5 KKVLMTMFGLLMFPLLFACSNTQSQGVEAIKAKGKLVVALNPEFAPFEYQKLVDGKNQIV 64 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G DV+ +A++ + + +++ P++ +L S + D+ T R S Sbjct: 65 GSDVELAKAIAKELGVE---VEFSPMSFDNVLASLDSGKADLAISGVSKTEER--SQVYD 119 Query: 118 FRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F Y I+ K SV L+ + Q G+ E + +A ++ P Sbjct: 120 FSIPYYTSKNKVIVRKSELTNYQSVKDLAQKKVGAQKGSIQETLAKETLQASSLVSLP-- 177 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + ++ + DA + N + D + A A+ + Sbjct: 178 --KNGNLIIDLKSGQLDAVIFEEPVAKGFVENNPDLAIAEFDFDNDKEDSYAVAMKKDSK 235 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 E V T + + EL K I+ K + Sbjct: 236 ELKEAVDKTIQKLKDSGELD---KLIDDAFKAS 265 >gi|68160898|gb|AAY86895.1| lr1665 [Lactobacillus reuteri] Length = 283 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 44/272 (16%), Positives = 94/272 (34%), Gaps = 17/272 (6%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 T + I++R + G++ V + NG G+DVD RA+ Sbjct: 25 SVTKRADTQDTWNRIERRKRVIVGLDDSFVPMDFRQKNGKLVGYDVDLARAVFKQYG--- 81 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 K+ + P++ + L++ ID+L R + + + Q + KK Sbjct: 82 IKVDFQPIDWSMKETELKNGTIDLLWNGYSVNPSRAKKVAFSR--YYLENRQILVTKKKS 139 Query: 136 GISSVSQLSGASICVQAGTTTELTLAD---YFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 I +++ ++G ++ VQ G+T L + K + P++++ A+R Sbjct: 140 NIKNLNGMTGKTLGVQNGSTGVTVLDEKPKLLKDKIKHHTPVLYDTFPNAFIDLNANRIQ 199 Query: 193 AYTGDISALYALKLTNDRPSEHVI-LPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 D + + + + A + +GD + + Sbjct: 200 GILMDEVYANYYIKHQPNSNSYRTYISKELPMEHFAVGMRKGDKTLK---KKINQGLGNL 256 Query: 252 EELGITQKNINQVSKDTTNPDVQRFLGIDKSS 283 ++ G +K + N +LG D + Sbjct: 257 QKNGELRKLNEKWFGQDNN-----YLGPDNTK 283 >gi|83717600|ref|YP_440544.1| glutamine ABC transporter periplasmic protein [Burkholderia thailandensis E264] gi|167579227|ref|ZP_02372101.1| glutamine ABC transporter periplasmic protein [Burkholderia thailandensis TXDOH] gi|167617348|ref|ZP_02385979.1| glutamine ABC transporter periplasmic protein [Burkholderia thailandensis Bt4] gi|257141205|ref|ZP_05589467.1| glutamine ABC transporter periplasmic protein [Burkholderia thailandensis E264] gi|83651425|gb|ABC35489.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia thailandensis E264] Length = 253 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 92/268 (34%), Gaps = 21/268 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + F+ + L SF++ AS L G +T + F + + + GFD Sbjct: 1 MGRRSFIKTFVAVALAGASFASLASAHAK-----ELIVGTDTSFMPFEFKQGD-KYVGFD 54 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D ++ + P++ ALQ++ ID+ R+ ++ Sbjct: 55 LDLWAEIAKDAG---WTYKIQPMDFAGLIPALQTQNIDVALSGMTIKEERKKAIDF--SD 109 Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G ++ I S+ L+G I + GT T D+ KAH F + Sbjct: 110 PYYDSGLAAMVQTNDATIKSIDDLNGKVIAAKTGTATI----DWIKAHLKPKEIRQFPNI 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 ++ A A R DA D + + N+ + +S +G Sbjct: 166 DQAYLALEAGRVDAAMHDTPNVL-FFVNNEGKGRVKVAGTPVSGDKYGIGFPKGSP---- 220 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKD 267 +V+ + + + G K + Sbjct: 221 LVAKVNAELAKMKADGRYAKIYKKWFGS 248 >gi|229587937|ref|YP_002870056.1| putative ABC transporter exported protein [Pseudomonas fluorescens SBW25] gi|229359803|emb|CAY46653.1| putative ABC transport system, exported protein [Pseudomonas fluorescens SBW25] Length = 267 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 50/273 (18%), Positives = 102/273 (37%), Gaps = 17/273 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + +L + + + A + D KRG LK G++ + F G+ GF+ Sbjct: 2 MMKKYLSMLLLGVTALVAAAAVQAGAIDDAVKRGTLKVGMDPTYMPFEMTDKRGEIIGFE 61 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A++ ++ K++ + A + + D++ T R L L F Sbjct: 62 VDILKAMAKSMG---VKLELVSTGYDGIIPAFLTGKFDMIGSGMTLTQERN--LRLNFSE 116 Query: 121 ITYFDGQGFIMHK--KKGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVF 176 GQ ++ K + I S L+ + + GTT E+ + Sbjct: 117 PFIVVGQTLLIRKELEGTIKSYKDLNDEKYRLTSKLGTTGEMVAKKLISKAKY----HGY 172 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + +E + DA+ D + + V L + + PLA + +GD Sbjct: 173 DNEQEGVLDVVNGKADAFVYDAPYNVVAEKKVGN-GKLVFLEEPFTFEPLAFGLKKGD-- 229 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 Y+ +++ + + G + ++ K++ Sbjct: 230 -YDSINFINNFLHQIRNDGTYDRIHDKWFKNSE 261 >gi|307296217|ref|ZP_07576045.1| ABC transporter, permease protein [Enterococcus faecalis TX0411] gi|306496091|gb|EFM65673.1| ABC transporter, permease protein [Enterococcus faecalis TX0411] gi|315159996|gb|EFU04013.1| ABC transporter, permease protein [Enterococcus faecalis TX0312] Length = 722 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 51/275 (18%), Positives = 93/275 (33%), Gaps = 16/275 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + F+ ++++ +F ++ S + KK G + F + G + G D Sbjct: 1 MKRKHFLLSFFVMMVTLLTFISSTSAHAEGKK---YTIGTDLTFAPFEFQDSKGKYIGID 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A++ ++ PL A+QSKQID + T R+ S F Sbjct: 58 VDLLDAIAKD---QGFEVDLKPLGFDSAVQAIQSKQIDGMIAGMSITDERKKS--FDFSD 112 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G + K I S L G ++ + GT + L Y F+ Sbjct: 113 PYFDSGLQLAVKKGNDKIKSYDDLKGKTVAAKVGTESANFLEKN--KEKYDYTIKNFDDA 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + A DA D L + ++ D + S A+ +G Sbjct: 171 TGLYKALENGEADAIVDDYPVLGYAV---KNGQKLQLVGDKETGSSYGFAVKKGQNP--E 225 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 ++ + + ++ G K +N + Q Sbjct: 226 LIKKFNAGLKNLKDNGTYDKILNNYLATGDETNTQ 260 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 43/260 (16%), Positives = 88/260 (33%), Gaps = 17/260 (6%) Query: 18 TSFSTNASILGDIK-KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 T+ + I K+ ++ F A GD+ G DVD + ++ + Sbjct: 257 TNTQDAGEQMKKITPKKEKYVIASDSTFAPFEFQNAQGDYVGIDVDLVKR-AAELQGFTV 315 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KK 135 + +++ ++ A++S Q D + T R+ + F + G + K Sbjct: 316 EFKFIGFSSA--VQAVESGQADGMVAGMTITDDRKKA--FDFSVPYFDSGIQIAVKKGND 371 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I S L G + V+ GT + L Y + + + +A DA Sbjct: 372 KIKSYDDLKGKKVGVKIGTESADFLEKN--KKKYDYSIKYLDTTDALYSALEIGEVDAM- 428 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEEL 254 D + + ++P I + A+ + + E + + M E Sbjct: 429 MDDYPVIGYGVAQNQPLATPIPREKGGS--YGFAVKKGQNPELLEMFNEGLKEMKRTGEY 486 Query: 255 ----GITQKNINQVSKDTTN 270 G K+ N+ ++T + Sbjct: 487 DKIIGTYVKDGNEAKEETAD 506 >gi|300908216|ref|ZP_07125682.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri SD2112] gi|300894643|gb|EFK87999.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri SD2112] Length = 289 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 44/272 (16%), Positives = 94/272 (34%), Gaps = 17/272 (6%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 T + I++R + G++ V + NG G+DVD RA+ Sbjct: 31 SVTKRADTQDTWNRIERRKRVIVGLDDSFVPMDFRQKNGKLVGYDVDLARAVFKQYG--- 87 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 K+ + P++ + L++ ID+L R + + + Q + KK Sbjct: 88 IKVDFQPIDWSMKETELKNGTIDLLWNGYSVNPSRAKKVAFSR--YYLENRQILVTKKKS 145 Query: 136 GISSVSQLSGASICVQAGTTTELTLAD---YFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 I +++ ++G ++ VQ G+T L + K + P++++ A+R Sbjct: 146 NIKNLNGMTGKTLGVQNGSTGVTVLDEKPKLLKDKIKHHTPVLYDTFPNAFIDLNANRIQ 205 Query: 193 AYTGDISALYALKLTNDRPSEHVI-LPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 D + + + + A + +GD + + Sbjct: 206 GILMDEVYANYYIKHQPNSNSYRTYISKELPMEHFAVGMRKGDKTLK---KKINQGLGNL 262 Query: 252 EELGITQKNINQVSKDTTNPDVQRFLGIDKSS 283 ++ G +K + N +LG D + Sbjct: 263 QKNGELRKLNEKWFGQDNN-----YLGPDNTK 289 >gi|300780997|ref|ZP_07090851.1| glutamate ABC superfamily ATP binding cassette transporter, binding protein [Corynebacterium genitalium ATCC 33030] gi|300532704|gb|EFK53765.1| glutamate ABC superfamily ATP binding cassette transporter, binding protein [Corynebacterium genitalium ATCC 33030] Length = 284 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 44/252 (17%), Positives = 88/252 (34%), Gaps = 18/252 (7%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 VS+L + L + +L I + G + G G + ++ +G G D+D Sbjct: 10 LVSVLGVSGLSACGSPDDQDLLAQI-ESGRVDVGSAFTNPGLSMMRDDGSPAGLDIDIAT 68 Query: 66 ALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + ++I DD +I++ +R L + +D+++ N R + A Sbjct: 69 YVINSIADDNGWDHPEIEWRETPPGQRASLLDNGYVDMVASNYSIDAKRTKEVSFA--GP 126 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Q + I+ + L G ++C GTT TL + ++ Sbjct: 127 YLLTHQALLTVDGSDITGLESLDGKNLCFVTGTTAAKTLREDIP----GVVLAEYDSYTA 182 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP-----DIISKSPLAPAIIQGDTE 236 A RA DA + D + L + P ++P ++ + + + Sbjct: 183 CLDALRAGAVDALSTDAAILSGF--SAHEPGVFQLVPLERDGAPLNDEHYGLGLPRDNDA 240 Query: 237 WYNIVSWTHYAM 248 + V+ M Sbjct: 241 SVSAVNEALEKM 252 >gi|170735288|ref|YP_001774402.1| extracellular solute-binding protein [Burkholderia cenocepacia MC0-3] gi|169821326|gb|ACA95907.1| extracellular solute-binding protein family 3 [Burkholderia cenocepacia MC0-3] Length = 259 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 49/267 (18%), Positives = 90/267 (33%), Gaps = 22/267 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + +L + + ++ G F A+G +G + Sbjct: 1 MKKLLQSLCVGAALLGSVAHAEQ-----------VVRVGTLADYAPFEYKDASGKLQGME 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + + K Q++ ++ AL++KQID + T RE S+ Sbjct: 50 IDIGKKMCDTM---KVKCQWVTMDFDALIPALKAKQIDAVLAQMSKTPEREQSVDFTRIF 106 Query: 121 ITYFDGQGFIMHKKKGISS-VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 T F+ + GI+ + L G +I VQ +T E L A + V++ + Sbjct: 107 TT--APVQFVAKQGSGITDGAATLRGKTIGVQTASTHESYLRRRLPAGKSGINVKVYQTL 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 +E A R DA D + Y R + I+ + + A A+ +GD Sbjct: 165 DEAWLDLEAGRVDAVLADNTVAYDWLTKAGRKEGFDFVGKPIADAEIFGDGTAIAVRKGD 224 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNI 261 + + K Sbjct: 225 APLKALFDKGIAQVQADGTFAAANKRY 251 >gi|221234445|ref|YP_002516881.1| cystine transporter subunit [Caulobacter crescentus NA1000] gi|220963617|gb|ACL94973.1| cystine-binding protein [Caulobacter crescentus NA1000] Length = 269 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 48/239 (20%), Positives = 81/239 (33%), Gaps = 12/239 (5%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 AS IK G L+ G+ F +G GF+VDF +AL+ + K ++ Sbjct: 35 AGASGWDRIKASGKLRVGLEGTYPPFNFQDKSGQLAGFEVDFAKALAEQLG---VKAEFS 91 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 P +L+S +ID++ T R+ + P T Q + K + Sbjct: 92 PAPFAGLLGSLESGRIDVVINQITITPDRQAKYDFSE-PYTVSGIQIIALKGKPAPTGPE 150 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L+G + V GT E L + ++ RA R DA D Sbjct: 151 GLTGKKVGVGLGTNYEQWLRANVPTAD----VRTYDDDPTKYQDLRAGRIDAVLNDRLVA 206 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 T+ E V + A+ + D +++ A+ +L + Sbjct: 207 ADFVKTSP---EFVASGQPFAAQGSGVAMQK-DPALKVVINQAINALRANGKLAAISQQ 261 >gi|238920409|ref|YP_002933924.1| arginine-binding periplasmic protein 1 [Edwardsiella ictaluri 93-146] gi|238869978|gb|ACR69689.1| arginine-binding periplasmic protein 1 [Edwardsiella ictaluri 93-146] Length = 243 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 47/267 (17%), Positives = 95/267 (35%), Gaps = 28/267 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +IL I + T+ T ++ F + A +GFD Sbjct: 1 MKKIIIAAILTGISVSATAAQT-------------IRFAAEASYPPFEFMDAQNKMQGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A+ + + + + +L+ K+ID + + D T R+ + + Sbjct: 48 VDLANAICQQMKATCT---FSNQSFDSLIPSLRFKRIDAVISSMDITPERQKQVDFSQ-- 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+D + +K ++ V+ L G + +Q GTT + L D + + P+ ++ + Sbjct: 103 -PYYDNSALFIAEKGKVADVAALKGKRVGIQNGTTHQKYLMD----KHPELTPVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R DA GD + + N P + + L A+ +G+ Sbjct: 158 NAILDLKNGRIDAVFGDTAVVNEWMKQNPNLAPVGTKVTDADYFGTGLGIAVRKGNGPLL 217 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVS 265 + ++ G Q ++ Sbjct: 218 EQFNAALN---QLKQDGQYQTIYDKWF 241 >gi|115359035|ref|YP_776173.1| extracellular solute-binding protein [Burkholderia ambifaria AMMD] gi|115284323|gb|ABI89839.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia ambifaria AMMD] Length = 259 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 48/267 (17%), Positives = 90/267 (33%), Gaps = 22/267 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + +L + + ++ G F A+G +G + Sbjct: 1 MKKLLQSLCVGAALLGSVAHAEQ-----------VVRVGTLADYAPFEYKDASGKLQGME 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + + K Q++ ++ AL++KQID + T RE S+ Sbjct: 50 IDIGKKMCDTM---KVKCQWVTMDFDALIPALKAKQIDAVLAQMSKTPEREQSVDFTRIF 106 Query: 121 ITYFDGQGFIMHKKKGISS-VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 T F+ + G++ + L G +I VQ +T E L A + V++ + Sbjct: 107 TT--APVQFVAKQGSGVTDNAATLRGKTIGVQTASTHESYLRRRLPASKSGINVKVYQTL 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 +E A R DA D + Y R + I+ + + A A+ +GD Sbjct: 165 DEAWLDLEAGRVDAVFADNTVAYDWLTKAGRKEGFDFVGKPIADAEIFGDGTAIAVRKGD 224 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNI 261 + + K Sbjct: 225 APLKALFDKGIAQVQADGTFAAANKRY 251 >gi|91781138|ref|YP_556345.1| polar amino acid ABC transporter periplasmic ligand-binding protein [Burkholderia xenovorans LB400] gi|91693798|gb|ABE36995.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia xenovorans LB400] Length = 283 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 50/253 (19%), Positives = 95/253 (37%), Gaps = 16/253 (6%) Query: 2 YKDFFVSILCLIILFFTSF--STNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 + +S+L I L S+ + +A L IK RG L G+ + G Sbjct: 7 KRTQRLSMLVSIALVGGSWLNTAHADATLDRIKSRGTLVVGVVLDGTYGSLDPVTRKPVG 66 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 ++V+ +L+S + K + + + R LQ ++D+L + +T R+ L++ Sbjct: 67 YNVELGESLASHLG---VKFEAVEVTPPNRVQFLQQGKVDVLIASMQYTKERD--EILSY 121 Query: 119 RPITYFD-GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 P + G ++HK GI L +CV G+ L + + A F+ Sbjct: 122 VPTPFEQIGGSAMVHKGSGIHDWKDLRDKPVCVSQGSNYTKPLIEQYGAQ-----VKAFK 176 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYA-LKLTNDRPSEHV-ILPDIISKSPLAPAIIQGDT 235 + E A R C A + A L ++ ++ + + SP + +G T Sbjct: 177 GMPEALLALRGGSCVASVHVTPGIQARLASSSGEWKDYESPIATQLVPSPSVIWVRKGQT 236 Query: 236 EWYNIVSWTHYAM 248 + + Sbjct: 237 DTVAALDRIVKNW 249 >gi|291086278|ref|ZP_06355258.2| putative ABC transporter, substrate binding protein [Citrobacter youngae ATCC 29220] gi|291068723|gb|EFE06832.1| putative ABC transporter, substrate binding protein [Citrobacter youngae ATCC 29220] Length = 297 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 91/252 (36%), Gaps = 9/252 (3%) Query: 6 FVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 ++++L I++ T + NA+ L I+ L G L F+ NG G+ + C Sbjct: 18 WLTLLAGIVVSPTLMAQQNAATLDHIQNSSVLNVGYRQ-LPPFSLTDNNGKVTGYTIAVC 76 Query: 65 RALSSAI----FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ + I Y+P+N ERF AL +++ID+ R S+ + Sbjct: 77 NMIADKLRQYLKLSSLTIHYIPVNFGERFSALNTRKIDMDCSVNTNAPERMSSVSFSID- 135 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y I +K I S+ L G ++ + + L + ++ I + Sbjct: 136 -YYTAKMRIIALRKNNIHSIVDLKGRTVSLPGSSKDLLEFNKANREQHLNISTITTTTIN 194 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS-PLAPAIIQGDTEWYN 239 + A D + L +++P + I A + + D ++ Sbjct: 195 GAFDKMAHNEAAALFLDDVLAWPLIKDSEQPELFSMSAQSIGNDMHYAIMMRKNDPQFVT 254 Query: 240 IVSWTHYAMVTA 251 V+ T + Sbjct: 255 FVNSTLKDFFAS 266 >gi|256828611|ref|YP_003157339.1| extracellular solute-binding protein family 3 [Desulfomicrobium baculatum DSM 4028] gi|256577787|gb|ACU88923.1| extracellular solute-binding protein family 3 [Desulfomicrobium baculatum DSM 4028] Length = 247 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 47/245 (19%), Positives = 90/245 (36%), Gaps = 21/245 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K I CL+ + +L + GI+ FA V +G GFD Sbjct: 1 MLKRAAFVIACLLCMAAGPALAEEKVLLN---------GIDANYPPFAYVDQSGKPSGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +++ + K++++P++ L +K+ID + T R + Sbjct: 52 VDAVDWIAAKMGF---KVKHVPVDWDGIIPNLLAKKIDFICSGMTITAERSEKVNFTA-- 106 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y++ + + KK ++ G ++ +QAGT+ +AD + K+ +++ Sbjct: 107 -PYWEVKNVFVTKKDSALKAEEIYGKEVTVGMQAGTSEAKWMADEKEKQGWKFTIKLYDS 165 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R DA + A RP I+ P A+ + D E Sbjct: 166 APMAIEDLVNGRLDAAAMNYP--PARDAEKKRP--VQIVGIFGEVEPFGAAVRKEDKELL 221 Query: 239 NIVSW 243 + ++ Sbjct: 222 DTLNK 226 >gi|259908946|ref|YP_002649302.1| Arginine-binding periplasmic protein 1 [Erwinia pyrifoliae Ep1/96] gi|224964568|emb|CAX56081.1| Arginine-binding periplasmic protein 1 [Erwinia pyrifoliae Ep1/96] gi|283478952|emb|CAY74868.1| Arginine ABC transport system, periplasmic component [Erwinia pyrifoliae DSM 12163] gi|310767151|gb|ADP12101.1| Arginine-binding periplasmic protein 1 [Erwinia sp. Ejp617] Length = 243 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 51/266 (19%), Positives = 90/266 (33%), Gaps = 26/266 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L L ++ T ++ F + AN +GFD Sbjct: 1 MKKIVIAALLAGFSLSASASQT-------------IRFAAEASYPPFEFIDANNKIQGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL I D + + +L+ ++ D + D T RE + Sbjct: 48 VDLANALCREIDADCT---FTNQAFDSLIPSLKFRRFDAVMSGMDITPEREKQVLFTQA- 103 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+D + +K ++SV L G + VQ GTT + +A+ + ++ + Sbjct: 104 --YYDNSALFITQKGKVTSVDALKGKRVGVQNGTTHQKYIAEKLP----DVKVVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R DA GD + + N P + S L A+ Q ++E Sbjct: 158 NAILDLKNGRIDAVFGDTAVVNEWLKNNPELAPLGDKVTDKTYFGSGLGIAVSQSNSELQ 217 Query: 239 NIVSWTHYAMVTAEELG-ITQKNINQ 263 ++ + I K Q Sbjct: 218 GKLNAALDKVKANGSYKAIYSKWFQQ 243 >gi|323129194|gb|ADX16624.1| arginine-binding periplasmic protein 1precursor [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] Length = 245 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 51/267 (19%), Positives = 93/267 (34%), Gaps = 28/267 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ T ++ F + AN GFD Sbjct: 3 MKKVLIAALIAGFSLSATAAQT-------------IRFATEASYPPFESMDANNKIVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL I + + +L+ ++ D + D T RE + Sbjct: 50 VDLANALCKEIDASCT---FTNQAFDSLIPSLKFRRFDAVMAGMDITPEREKQVLFT--- 103 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+D + ++ +SV QL G + VQ GTT + + D + + ++ + Sbjct: 104 TPYYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFIMDKYPE----ITTVPYDSYQ 159 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R DA GD + + N + P + + L A+ QG+TE Sbjct: 160 NAKLDLQNGRIDAVFGDTAVVTEWLKANPKLAPVGDKVTDKDYFGTGLGIAVRQGNTELQ 219 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVS 265 + A+ ++ G + N+ Sbjct: 220 QKFN---TALEKVKKDGTYETIYNKWF 243 >gi|301157472|emb|CBW16962.1| arginine-binding periplasmic protein 1 precursor [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] Length = 243 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 51/267 (19%), Positives = 93/267 (34%), Gaps = 28/267 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ T ++ F + AN GFD Sbjct: 1 MKKVLIAALIAGFSLSATAAQT-------------IRFATEASYPPFESMDANNKIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL I + + +L+ ++ D + D T RE + Sbjct: 48 VDLANALCKEIDASCT---FTNQAFDSLIPSLKFRRFDAVMAGMDITPEREKQVLFT--- 101 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+D + ++ +SV QL G + VQ GTT + + D + + ++ + Sbjct: 102 TPYYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFIMDKYPE----ITTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R DA GD + + N + P + + L A+ QG+TE Sbjct: 158 NAKLDLQNGRIDAVFGDTAVVTEWLKANPKLAPVGDKVTDKDYFGTGLGIAVRQGNTELQ 217 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVS 265 + A+ ++ G + N+ Sbjct: 218 QKFN---TALEKVKKDGTYETIYNKWF 241 >gi|317472160|ref|ZP_07931492.1| extracellular solute-binding protein, family 3 [Anaerostipes sp. 3_2_56FAA] gi|316900564|gb|EFV22546.1| extracellular solute-binding protein, family 3 [Anaerostipes sp. 3_2_56FAA] Length = 265 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 56/269 (20%), Positives = 102/269 (37%), Gaps = 25/269 (9%) Query: 1 MYKDFFVSI---LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K V++ L +LF S + + + G N F V N Sbjct: 1 MRKILTVALAGVLAATMLFAGCSKKEESKIPE-----KIIVGTNAEFPPFEYVDDNKKVD 55 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+ + ++ + KI+ + K +++SK I++++ T R+ ++ + Sbjct: 56 GFDIALMKEIAKRM---DKKIEIQNMEFKSLIGSMESKTINVVAAGMTKTEERQNAVDFS 112 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA-DYFKAHNMKYHPIVF 176 Y Q I++K I+ +SQL G I VQ GTT +L + D F + + Sbjct: 113 DS--YYTSNQAIIVNKDSKITKLSQLDGKKIGVQEGTTGDLISSGDKFGEPGKEKVVVKK 170 Query: 177 ERVE------EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 +V+ + + DA D N + + VI D A+ Sbjct: 171 AKVKRFKKGVDAVMDLKNGSVDAVVIDEKPAQEFVKNNSKKLKLVI--DSAGAEYYCLAL 228 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQK 259 +G+ E+ ++ A+ +E G K Sbjct: 229 PKGNEEFKKEINKQLKAI---KEDGTYDK 254 >gi|114764748|ref|ZP_01443931.1| ABC amino acid transporter, periplasmic ligand binding protein [Pelagibaca bermudensis HTCC2601] gi|114542797|gb|EAU45819.1| ABC amino acid transporter, periplasmic ligand binding protein [Roseovarius sp. HTCC2601] Length = 276 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 35/247 (14%), Positives = 83/247 (33%), Gaps = 12/247 (4%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 I+++G L+ G+ F +G G +V+ + + F + + ++ Sbjct: 31 ASIEEQGVLRIGVKCDSPPFGASGIDGTPIGIEVEMAKKIGEYAFGSEEGAELSCVTSES 90 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 R +L S +ID++ RE + I ++ ++ + +S L+G + Sbjct: 91 RIPSLNSGKIDLILATLGRFPAREEVIDF--SNIYFWGTSNVLVPVDSPVQELSDLAGET 148 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 + + G + L + + + A R Y GD +Y L Sbjct: 149 LLIVKGGSQIRWLEENIP----DIEMMQLNTTADGIQALLQGRAAGYVGDGGLIYTLA-- 202 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 + ++ + + + + + E V+ A+ + I + ++ Sbjct: 203 -GNYDQLRVVEEGLDLGVNGIGLRKDEPELMAFVN---AALDQLRAENFYETVITEFVEE 258 Query: 268 TTNPDVQ 274 DV Sbjct: 259 PAVADVM 265 >gi|303247503|ref|ZP_07333775.1| extracellular solute-binding protein family 3 [Desulfovibrio fructosovorans JJ] gi|302491199|gb|EFL51091.1| extracellular solute-binding protein family 3 [Desulfovibrio fructosovorans JJ] Length = 250 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 42/232 (18%), Positives = 83/232 (35%), Gaps = 17/232 (7%) Query: 12 LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI 71 + +L F + + ++ GI+ G F V +G GFDV+ ++ + Sbjct: 14 VFVLCFGGLAAAEEKV-------YIN-GIDFGFPPFGYVDKDGKPTGFDVESLNWIAKKM 65 Query: 72 FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131 K+++ P++ AL +K+IDI++ T R + + Y Q ++ Sbjct: 66 GF---KVKHQPMDWDGIIPALLAKKIDIVASGMSATAERAKKVDFSI--PYYEVTQVLLV 120 Query: 132 HKKKGISSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190 +K + L G I VQ GT T L + K+ + ++ + + R Sbjct: 121 PEKDKTTLAEMLKSGKKIGVQRGTVTAKLLEELVTKPGYKFEVVPYDSTDLSIEDVKIGR 180 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 D + K P + A+ + D E+ ++ Sbjct: 181 IAGSGMDSTI---AKEVMKNPGFKIAGTFDAKPEKYGYAMRKEDKEFQKKIN 229 >gi|172063856|ref|YP_001811507.1| extracellular solute-binding protein [Burkholderia ambifaria MC40-6] gi|171996373|gb|ACB67291.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MC40-6] Length = 259 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 48/267 (17%), Positives = 89/267 (33%), Gaps = 22/267 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + +L + + ++ G F A+G +G + Sbjct: 1 MRKLLQSLCVGAALLGSVAHAEQ-----------VVRVGTLADYAPFEYKDASGKLQGME 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + + K Q++ ++ AL++KQID + T RE S+ Sbjct: 50 IDIGKKMCDTM---KVKCQWVTMDFDALIPALKAKQIDAVLAQMSKTPEREQSVDFTRIF 106 Query: 121 ITYFDGQGFIMHKKKGISS-VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 T + + GI+ + L G +I VQ +T E L A + V++ + Sbjct: 107 TT--APVQLVAKQGSGITDNAATLRGKTIGVQTASTHESYLRRRLPASKSGINVKVYQTL 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 +E A R DA D + Y R + I+ + + A A+ +GD Sbjct: 165 DEAWLDLEAGRVDAVFADNTVAYDWLTKAGRKEGFDFVGKPIADAEIFGDGTAIAVRKGD 224 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNI 261 + + K Sbjct: 225 APLKALFDKGIAQVQADGTFAAANKRY 251 >gi|319645105|ref|ZP_07999338.1| arginine-binding extracellular protein artP [Bacillus sp. BT1B_CT2] gi|317392914|gb|EFV73708.1| arginine-binding extracellular protein artP [Bacillus sp. BT1B_CT2] Length = 255 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 48/270 (17%), Positives = 94/270 (34%), Gaps = 16/270 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + + T+ T++S L G + F + GFD Sbjct: 1 MKKWMLLVVTACVTFALTACGTSSSSDDK----KTLVMGTSADYPPFESKDGD-KIVGFD 55 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL+ +I+ ++ AL++ ++DI+ T R+ + Sbjct: 56 VDLAEALAEKTG---HEIEVKDMDFNGLVTALKTNKVDIVLSGMTPTPKRKKQVDF--SN 110 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y + K GI S+ L G ++ VQ G+ E + + R+ Sbjct: 111 VYYTAHNMIVTKKSSGIKSLDDLKGKTVGVQLGSIQEEKAKELTP--DYDLKVENRNRIS 168 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 ++ +A R DA + N+ + + + + K+ A A +G ++ Sbjct: 169 DLTEEIKAGRFDAAIIEDIVAEKYINKNEELAGYNLPKEPDEKAGSAIAFKKGS----DL 224 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTN 270 + A+ E+ G K + T Sbjct: 225 TEKFNKALEEMEKSGELDKLKEKWFGGETK 254 >gi|187732473|ref|YP_001881001.1| glutamine ABC transporter periplasmic protein [Shigella boydii CDC 3083-94] gi|187429465|gb|ACD08739.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Shigella boydii CDC 3083-94] Length = 248 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 52/268 (19%), Positives = 92/268 (34%), Gaps = 24/268 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M VS+ L ++F S L +T V F + + + GFD Sbjct: 1 MKSVLKVSLAALTLVFAVSSHA---------ADKKLVVATDTAFVPFEFKQGD-KYVGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A++ + D + P++ ALQ+K +D+ T R+ ++ + Sbjct: 51 VDLWAAIAKELKLD---YELKPMDFSGIIPALQTKNVDLALAGITITDERKKAIDFSDG- 106 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G ++ + SV L G + V++GT + DY KA+ F + Sbjct: 107 -YYKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNI 161 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + +R DA D + T + + D + A +G E + Sbjct: 162 DNAYMELGTNRADAVLHDTPNILYFIKTAGN-GQFKAVGDSLEAQQYGIAFPKGCDELRD 220 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKD 267 V+ T E G + + Sbjct: 221 KVNGALK---TLRENGTYNEIYKKWFGT 245 >gi|113866798|ref|YP_725287.1| ABC transporter periplasmic protein [Ralstonia eutropha H16] gi|113525574|emb|CAJ91919.1| ABC-type transporter, periplasmic component: PAAT family [Ralstonia eutropha H16] Length = 273 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 51/255 (20%), Positives = 91/255 (35%), Gaps = 15/255 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 + + A +L +K+ G LK G+ F A + +GFDVD RA++ + P Sbjct: 26 TAAQAADLLDTVKQAGVLKIGLEGTYPPFGFRGAKNELEGFDVDVARAVAGKLGVKP--- 82 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-I 137 +++ LQ+ + D++ + T R+ L + P Y D Q K Sbjct: 83 EFVTTEWSGIIAGLQAGKFDVIVNQVNVTPQRQQVLDFS-TPYVYSDAQLIQRKDDKRQF 141 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 S+ L G + V G+ D K+ + E A R DA D Sbjct: 142 KSLEDLKGHKLGVSLGS----NFNDLAKS-VPGIDVKTYPGAPEYLRDLAAQRVDAALND 196 Query: 198 ISALYALKLTNDRPSE-HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 + L T + P I+ ++ +A + + ++ ++ + LG Sbjct: 197 RLMVAYLVKTANLPLRPGAIVAGATTQ--VAIPFRKDNPKFAQAINHALDDLGKDGTLGK 254 Query: 257 TQKNINQVSKDTTNP 271 + D T P Sbjct: 255 LS--VKWFGTDVTRP 267 >gi|330955266|gb|EGH55526.1| extracellular solute-binding protein [Pseudomonas syringae Cit 7] Length = 281 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 48/274 (17%), Positives = 95/274 (34%), Gaps = 19/274 (6%) Query: 2 YKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + F S + L++ + L IK G L G+ F+ V +G GF+ Sbjct: 7 RRTFLFSAMGLMLNAGIAGQAMAGEQLQKIKDSGTLNVGLEGTYPPFSFVDESGKLTGFE 66 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F AL+ + K + P AL SK++D++ + R+ + Sbjct: 67 VEFSEALAKELG---VKAKIQPSKWDGILAALDSKRLDVVINQVTISDERKKKYDFSE-- 121 Query: 121 ITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP----- 173 G ++ K + I + + L+G + + + ++ E L + P Sbjct: 122 PYTVSGIQALVLKTNEDKIKTATDLTGKKVGLTSASSYESYLNKNLVIDGAEDKPLQYPF 181 Query: 174 -----IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 ++ ++ L K D+ + + + + P + Sbjct: 182 EDVQIAPYDNDNVAFQDLGLGAGKRLDAILTNLVTAKPRLDQDKRFKLAGEPLYEEPNSV 241 Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNI 261 AI + D EW V + + L ++QK I Sbjct: 242 AIEKDDPEWDAKVRQVFAELKSDGTLSKLSQKWI 275 >gi|225420155|ref|ZP_03762458.1| hypothetical protein CLOSTASPAR_06498 [Clostridium asparagiforme DSM 15981] gi|225041212|gb|EEG51458.1| hypothetical protein CLOSTASPAR_06498 [Clostridium asparagiforme DSM 15981] Length = 299 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 41/251 (16%), Positives = 82/251 (32%), Gaps = 11/251 (4%) Query: 20 FSTNASILGDIKKRG-FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 + + + + G G + + NG++ GFD++ + ++ + + Sbjct: 55 SAAESETSAEAQAAGGHFIVGFDQEFPPMGFMGDNGEYTGFDLELAQEVAKRLG---LEY 111 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 Q P+ + + L S ID + T + + Q F++ GI+ Sbjct: 112 QPQPVIWDTKDMELDSGNIDCIWNGFTMT---GRESDYEWTEAYMANSQVFVVAADSGIA 168 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 S+ L G + QA ++ L + + DA D Sbjct: 169 SMDDLKGKVVECQADSSALAALNENPDLTATFKELVTTADYNSAFMDLEQGAVDAIAMD- 227 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 + ++ ++ VIL D +S +G+TE + V T M L Sbjct: 228 VIVAGYQIQQRN-ADFVILEDHLSAEEYGVGFKKGNTELRDKVQKTLEEMAQDGTLKAIS 286 Query: 259 KNINQVSKDTT 269 + +D T Sbjct: 287 E--KWFGEDVT 295 >gi|302538461|ref|ZP_07290803.1| glutamine-binding periplasmic protein [Streptomyces sp. C] gi|302447356|gb|EFL19172.1| glutamine-binding periplasmic protein [Streptomyces sp. C] Length = 482 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 48/240 (20%), Positives = 88/240 (36%), Gaps = 15/240 (6%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 + ++G L + F + NG GFDV ++ + + KI P + Sbjct: 249 KVVEKGKLTTCTHLPYPPFQFEQ-NGKVVGFDVALIDLVAKKLEVE-QKILDTPFENFKT 306 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS--GA 146 L S Q D+ + T R+ ++ + Q + KK GI+S++ L Sbjct: 307 GAFLNSGQCDLAAAGMTITDERKKNVDF--SVPYFDATQALLATKKSGITSLADLKAKNK 364 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 + QA TT E A ++P+ FE + + R + DA D + Sbjct: 365 KLGAQAETTGESY------AKAQGFNPVAFESSDAVLNGLRTGQVDAVVIDYPVVQGWLK 418 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 +E V+ +I + ++ +G+T + A+ A+ G +K Q Sbjct: 419 DPKNSAEFVLGQNIETGEKYGFSVKKGNTALLAAID---KAVTDAKADGTYKKIYEQWIG 475 >gi|139438444|ref|ZP_01771960.1| Hypothetical protein COLAER_00950 [Collinsella aerofaciens ATCC 25986] gi|133775983|gb|EBA39803.1| Hypothetical protein COLAER_00950 [Collinsella aerofaciens ATCC 25986] Length = 331 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 53/257 (20%), Positives = 96/257 (37%), Gaps = 13/257 (5%) Query: 21 STNASILGD-IKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKI 78 + AS +K G K G F+ + +G +GFD + LS+ I + +K+ Sbjct: 79 AIAASTWATAVKDAGVFKIGGVQTSTLFSLLNEKDGQTRGFDAGIAQLLSNYILGE-NKV 137 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + + + R LQ+ Q+D + T R+ + A P Y ++ I Sbjct: 138 EITQVTSDTRESVLQNGQVDAVFATYTITDERKKLVSFAG-PYYYTQQAILVLADNDDIK 196 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 SV L ++ VQ+G+ L ++ + + F+ EE A + R DAY D Sbjct: 197 SVDDLVDKNVAVQSGSNGPAILEEFAPKASQQ----EFKTDEEARQALQQGRVDAYVIDN 252 Query: 199 SALYALKLTNDRPSEHVILPDII-SKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 + P ++ I SK P + D++ V+ + Sbjct: 253 NM--QQSALVREPGKYKIAGKPFGSKEPYGIGLP-LDSDGVAFVNDFLKKIEDDGTWTEL 309 Query: 258 QKN-INQVSKDTTNPDV 273 + I + DT P++ Sbjct: 310 WQICIGDRTGDTNVPEL 326 >gi|291544976|emb|CBL18085.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [Ruminococcus sp. 18P13] Length = 277 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 89/268 (33%), Gaps = 13/268 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M +IL +L T + ++ G + F V NG++ GFD Sbjct: 1 MKLKSIFAILTAGVLACTGLTACGDDKAASNQKATFTVGFDQDFPPFGYVDENGEFTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ + + + +I+ P++ + L L S I + + Sbjct: 61 LELAKEAAKRM---DMEIKLQPIDWDSKELELSSGSISCIWNGFTMN---GRENDYTWTE 114 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA-DYFKAHNMKYH-PIVFER 178 + Q F++ GI + + L+G + Q + L D FK + + + Sbjct: 115 SYMDNSQVFVVKSDSGIKTQADLAGKIVTAQTDSAALNALNGDDFKDLKASFKELLTCAQ 174 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 A DA DI A + S+ +IL + I K A +G+TE Sbjct: 175 YNTAFMDLEAGAVDAVAMDIGV--AKYQIEGKESKFIILDEPIVKEQYAVGFYKGNTEMR 232 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSK 266 + V M G +K + Sbjct: 233 DKVQKALDEMAA---DGTFKKISEKWFG 257 >gi|167758444|ref|ZP_02430571.1| hypothetical protein CLOSCI_00784 [Clostridium scindens ATCC 35704] gi|167664341|gb|EDS08471.1| hypothetical protein CLOSCI_00784 [Clostridium scindens ATCC 35704] Length = 283 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 38/232 (16%), Positives = 74/232 (31%), Gaps = 7/232 (3%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L G + + +G++ GFD++ + + + K+ P++ + + + S Sbjct: 48 TLIVGFDASFPPYGYKDDDGEYVGFDLELAQEVCDR---NDWKLVKQPIDWDAKDMEIDS 104 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 ID + + + Q ++ GI+S LSG + QA + Sbjct: 105 GTIDCIWNGFTMN---GREDEYTWSDPYIDNKQVIVVATDSGINSFDDLSGKLVETQADS 161 Query: 155 TTELTLA-DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 + L D + + CDA DI Y + P + Sbjct: 162 SALAALQGDQKELAGTFGSLTEIAEYNTAFMDLESGACDAIAMDIGVAYYQINSRKNPDD 221 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 + +L + IS A G+ E + V T M + + Sbjct: 222 YKVLDEEISSEQYAVGFKLGNEELRDKVQATLDEMAEDGTVAKIAEKYEDFG 273 >gi|167766045|ref|ZP_02438098.1| hypothetical protein CLOSS21_00538 [Clostridium sp. SS2/1] gi|317498084|ref|ZP_07956387.1| bacterial extracellular solute-binding protein, family 3 [Lachnospiraceae bacterium 5_1_63FAA] gi|167712125|gb|EDS22704.1| hypothetical protein CLOSS21_00538 [Clostridium sp. SS2/1] gi|291560003|emb|CBL38803.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [butyrate-producing bacterium SSC/2] gi|316894672|gb|EFV16851.1| bacterial extracellular solute-binding protein, family 3 [Lachnospiraceae bacterium 5_1_63FAA] Length = 261 Score = 134 bits (337), Expect = 3e-29, Method: Composition-based stats. Identities = 53/274 (19%), Positives = 97/274 (35%), Gaps = 17/274 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+++ +L + T S + K L G N F + GFD Sbjct: 1 MKK--FLTVALAGVLAASMLFTGCSKKEESKVPDKLIVGTNAEFPPFEYMNDKKQPDGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 + + + + K++ + K A++S I+ + T R+ S+ + Sbjct: 59 IAMIKEIGKRM---DKKVEIQNMEFKSLIGAMESNSINTIIAGMTKTKERQKSVDFSDS- 114 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA-DYFKAHNM---KYHPIVF 176 Y Q I+ K I +SQL G + VQ GTT ++ + + F N K + Sbjct: 115 -YYTSNQAIILKKDSKIKKLSQLEGKKVGVQEGTTGDIIASGEKFGEKNKVIVKTDVKRY 173 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 ++ + + DA D N + + V+ D AI +G+T Sbjct: 174 KKGVDAVMDLKNGAIDAVVIDEKPAQEFVKNNAKKLKLVV--DSAGAEYYCIAITKGNTA 231 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 + ++ A+ T + D+ N Sbjct: 232 YKEEINKQIKAIKKDG----TYDKLKAKYIDSAN 261 >gi|330971782|gb|EGH71848.1| cystine transporter subunit [Pseudomonas syringae pv. aceris str. M302273PT] Length = 221 Score = 134 bits (337), Expect = 3e-29, Method: Composition-based stats. Identities = 48/218 (22%), Positives = 79/218 (36%), Gaps = 12/218 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + F S + L++ + A L IK G L G+ F+ V +G GF+ Sbjct: 7 RRTFLFSAMGLMLSAGIAGQAMAGEQLQKIKDSGTLNVGLEGTYPPFSFVDESGKLTGFE 66 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F AL+ + K + P AL S+++D++ + R+ + P Sbjct: 67 VEFSEALAKELG---VKAKIQPSKWDGILAALDSRRLDVVINQVTISDERKKKYDFSE-P 122 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 T Q ++ K I S LSG + V GT ++ KA+ ++ Sbjct: 123 YTISGIQALVLKKNADTIKSAKDLSGKKVGVGLGT----NYEEWLKANVPGAIVKTYDDD 178 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 R DA D L AL++ L Sbjct: 179 PSKIQDLSVGRIDAILVDR--LAALEMAAKTKGTRKEL 214 >gi|29142427|ref|NP_805769.1| arginine-binding periplasmic protein 1 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|29138057|gb|AAO69618.1| arginine-binding periplasmic protein 1 precursor [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 243 Score = 134 bits (337), Expect = 3e-29, Method: Composition-based stats. Identities = 51/267 (19%), Positives = 94/267 (35%), Gaps = 28/267 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ T ++ F + AN GFD Sbjct: 1 MKKVLIAALIAGFSLSATAAQT-------------IRFATEASYPPFESMDANSKIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL I + + +L+ ++ D + D T RE + Sbjct: 48 VDLANALCKEIDASCT---FTNQAFDSLIPSLKFRRFDAVMAGMDITPEREKQVLFT--- 101 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+D + ++ +SV QL G + VQ GTT + + D + + + ++ + Sbjct: 102 TPYYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFIMD----KHPEITTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R DA GD + + N + P + + L A+ QG+TE Sbjct: 158 NAKLDLQNGRIDAVFGDTAVVTEWLKANPKLAPVGDKVTDKDYFGTGLGIAVRQGNTELQ 217 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVS 265 + A+ ++ G + N+ Sbjct: 218 QKFN---TALEKVKKDGTYETIYNKWF 241 >gi|320355176|ref|YP_004196515.1| PAAT family amino acid ABC transporter substrate-binding protein [Desulfobulbus propionicus DSM 2032] gi|320123678|gb|ADW19224.1| amino acid ABC transporter substrate-binding protein, PAAT family [Desulfobulbus propionicus DSM 2032] Length = 273 Score = 134 bits (337), Expect = 3e-29, Method: Composition-based stats. Identities = 42/242 (17%), Positives = 89/242 (36%), Gaps = 21/242 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + + ++L + + +S + ++G LK G+ F G G VD Sbjct: 15 RKWLGTLLLVAVFAVSSCAAE--------QQGPLKVGMELAYPPFEMTNTTGKPAGVSVD 66 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 +AL ++ + I+ ++ AL++ +IDI+ + T R S+ + Sbjct: 67 LAKALGISLGRE---IKIENMSFDGLIPALKTGKIDIILSSMTATAERAQSIDFSE--PY 121 Query: 123 YFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 G ++ K + +++ L G ++ V+ GTT +Y K +V ++ Sbjct: 122 LQTGLCLLVRKDSAVQTIADLDQDGMTVAVKKGTTG----HNYASKALKKAKLLVLDKEA 177 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + DA+ D + Y+ P L + A I + +T Sbjct: 178 AAVLEVVQGKADAFIYDQMSTYSNWKR--NPQTTRALLKPFQQESWAIGIRKDNTALKEE 235 Query: 241 VS 242 ++ Sbjct: 236 IN 237 >gi|296103152|ref|YP_003613298.1| arginine transporter, periplasmic binding protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057611|gb|ADF62349.1| arginine transporter, periplasmic binding protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 243 Score = 134 bits (337), Expect = 3e-29, Method: Composition-based stats. Identities = 53/267 (19%), Positives = 94/267 (35%), Gaps = 28/267 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L L T+ T ++ F + AN GFD Sbjct: 1 MKKVLIAALLASFSLSATAAQT-------------IRFATEASYPPFESIDANNKIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL I + + +L+ ++ID + D T RE + Sbjct: 48 VDLANALCKEIDATCT---FSNQAFDSLIPSLKFRRIDAVMAGMDITPEREKQVLFT--- 101 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+D + +K +SV QL G + VQ GTT + + D + + + ++ + Sbjct: 102 TPYYDNSALFIGQKGKFTSVDQLKGKKVGVQNGTTHQKFIMD----KHPEITTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R D GD + + ND+ P + + L A+ QG+TE Sbjct: 158 NAKLDLQNGRIDGVFGDTAVVTEWLKANDKLAPVGDKVTDKDYFGTGLGIAVRQGNTELQ 217 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVS 265 + A+ ++ G + + Sbjct: 218 QKFN---AALEKVKKDGTYETIYKKWF 241 >gi|218246307|ref|YP_002371678.1| family 3 extracellular solute-binding protein [Cyanothece sp. PCC 8801] gi|218166785|gb|ACK65522.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 8801] Length = 302 Score = 134 bits (337), Expect = 3e-29, Method: Composition-based stats. Identities = 46/288 (15%), Positives = 106/288 (36%), Gaps = 23/288 (7%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDD 74 S + +++ + + G L G L+ ++ + G+ + + + Sbjct: 19 AKTSLSETVIEKVARTGVLTAGSRLNLIPYSYFNDKEELDGYSLAVLNLIREDLEKQLGK 78 Query: 75 PSKIQYLP-LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 P K++ + + ER L S IDI +T R+ + + G ++ K Sbjct: 79 PIKLEIIEAQDISERIPKLMSGDIDISCDTV-FTWERDKFVDFSLS--YGVSGVRLLVPK 135 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 + + L G + + T + D K K I E A +A + DA Sbjct: 136 NSTLGTPESLEGKRVAIIPHTV----IGDTIKLVQPKATLIPVNNFTEGIEALKAGKVDA 191 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAIIQGDTEWYNIVSWTHYAMVTAE 252 GD L + + + ++P+ +A + +G++ + N+V+++ ++ Sbjct: 192 IAGDSIILDGERQRL-KSDNYQLVPEDPYARYGIACMVPEGNSTFLNLVNYSIAKLMQGY 250 Query: 253 ELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 +G + ++ + R++G + I + + + Y II Sbjct: 251 LIG------DPKYQEI----INRWIGPEGVVTIVKPEAIKDFFEYTII 288 >gi|322375116|ref|ZP_08049630.1| polar amino acid uptake (PAAT) family ABC transporter, amino acid-binding protein [Streptococcus sp. C300] gi|321280616|gb|EFX57655.1| polar amino acid uptake (PAAT) family ABC transporter, amino acid-binding protein [Streptococcus sp. C300] Length = 268 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 48/273 (17%), Positives = 91/273 (33%), Gaps = 19/273 (6%) Query: 3 KDFFVSILCLII--LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWK 57 K +++ L++ L F +T + + IK +G L +N F V Sbjct: 5 KKVLMTMFGLLMFPLLFACSNTQSQGVEAIKAKGKLVVALNPEFAPFEYQKLVDGKNQIV 64 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G DV+ +A++ + + +++ P++ +L S + D+ T R S Sbjct: 65 GSDVELAKAIAKELGVE---VEFSPMSFDNVLASLDSGKADLAISGVSKTEER--SQVYD 119 Query: 118 FRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F Y I+ K SV L+ + Q G+ E K + Sbjct: 120 FSIPYYTSKNKVIVRKSELTNYQSVKDLAQKKVGAQKGSIQET----LAKETLQDSSLVS 175 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + ++ + DA + N + D + A A+ + Sbjct: 176 LPKNGNLITDLKSGQLDAVIFEEPVAKGFVENNPDLAIAEFDFDNDKEDSYAVAMKKDSK 235 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 E V T + + EL K I+ K + Sbjct: 236 ELKEAVDKTIQKLKDSGELD---KLIDDAFKVS 265 >gi|256964404|ref|ZP_05568575.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis HIP11704] gi|307272573|ref|ZP_07553826.1| ABC transporter, permease protein [Enterococcus faecalis TX0855] gi|256954900|gb|EEU71532.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis HIP11704] gi|306510858|gb|EFM79875.1| ABC transporter, permease protein [Enterococcus faecalis TX0855] Length = 722 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 51/275 (18%), Positives = 92/275 (33%), Gaps = 16/275 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + F+ ++++ +F + S + KK G + F + G + G D Sbjct: 1 MKRKHFLLSFFVMMVTLLTFISGTSAHAEGKK---YTIGTDLTFAPFEFQDSKGKYIGID 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A++ ++ PL A+QSKQID + T R+ S F Sbjct: 58 VDLLNAIAKD---QGFEVDLKPLGFDSAVQAIQSKQIDGMIAGMSITDERKKS--FDFSD 112 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G + K I S L G ++ + GT + L Y F+ Sbjct: 113 PYFDSGLQLAVKKGNDKIKSYDDLKGKTVAAKVGTESANFLEK--SKEKYDYTIKNFDDA 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + A DA D L + ++ D + S A+ +G Sbjct: 171 TGLYKALENGEADAIVDDYPVLGYAV---KNGQKLQLVGDKETGSSYGFAVKKGQNP--E 225 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 ++ + + ++ G K +N + Q Sbjct: 226 LIKKFNAGLKNLKDNGTYDKILNNYLATGDETNTQ 260 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 43/260 (16%), Positives = 88/260 (33%), Gaps = 17/260 (6%) Query: 18 TSFSTNASILGDIK-KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 T+ + I K+ ++ F A GD+ G DVD + ++ + Sbjct: 257 TNTQDAGEQMKKITPKKEKYVIASDSTFAPFEFQNAQGDYVGIDVDLVKR-AAELQGFTV 315 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KK 135 + +++ ++ A++S Q D + T R+ + F + G + K Sbjct: 316 EFKFIGFSSA--VQAVESGQADGMVAGMTITDDRKKA--FDFSVPYFDSGIQIAVKKGND 371 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I S L G + V+ GT + L Y + + + +A DA Sbjct: 372 KIKSYDDLKGKKVGVKIGTESADFLEKN--KKKYDYSIKYLDTTDALYSALEIGEVDAM- 428 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEEL 254 D + + ++P I + A+ + + E + + M E Sbjct: 429 MDDYPVIGYGVAQNQPLATPIPREKGGS--YGFAVKKGQNPELLEMFNEGLKEMKRTGEY 486 Query: 255 ----GITQKNINQVSKDTTN 270 G K+ N+ ++T + Sbjct: 487 DKIIGTYVKDGNEAKEETAD 506 >gi|120609704|ref|YP_969382.1| extracellular solute-binding protein [Acidovorax citrulli AAC00-1] gi|120588168|gb|ABM31608.1| amino acid ABC transporter substrate-binding protein, PAAT family [Acidovorax citrulli AAC00-1] Length = 267 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 32/258 (12%), Positives = 77/258 (29%), Gaps = 13/258 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG------FLKCGINTGLVGFAEVKANG 54 M K ++++ L L +++ + G++ Sbjct: 1 MKKIAAIALVSLGALLAACGKNDSAQPAASTPATPAAAVTKIVIGLDDNFPPMGFRDDKN 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 GFD+D R + + + +++ P++ + L +++D L T R Sbjct: 61 QLVGFDIDMAREAAKRMGVE---VEFKPIDWSAKEAELSGRRVDALWNGLTITEER--KQ 115 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 +AF + Q ++ + + + L+G + Q G++ + Sbjct: 116 NIAFTAPYMENHQIIVVAANSPVKTKADLAGKIVGAQEGSSAVDAVKKEEAVFKSFKEFK 175 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 F R +A D + +P ++ +L + + + D Sbjct: 176 TFGDNVTALMDLSTGRLEAVVVD--EVVGRYYVAKKPQDYAVLDEHFGTEEYGVGVRKDD 233 Query: 235 TEWYNIVSWTHYAMVTAE 252 T + M Sbjct: 234 TALQGRLDKALADMKQDG 251 >gi|302519117|ref|ZP_07271459.1| sugar-binding protein [Streptomyces sp. SPB78] gi|302428012|gb|EFK99827.1| sugar-binding protein [Streptomyces sp. SPB78] Length = 336 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 44/265 (16%), Positives = 81/265 (30%), Gaps = 26/265 (9%) Query: 33 RGFLKCGINTGLVGFAEV----KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 RG L G++ + N D +GFD+D A++ + DP + + R Sbjct: 81 RGKLVVGVDQNSYRWGFRNPQRDGNNDIEGFDIDLAHAIAKDLLGDPDALVLRAIPTNRR 140 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV-SQLSGAS 147 A+ +D++ R T R + + Q I+ + + + L+G Sbjct: 141 VQAVADHDVDMVVRTMTITCRRLKDVSF--STPYFRTTQRIIVPRGSSVDGFNASLTGKR 198 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 +C +T E L + FK K + + + DA D + Sbjct: 199 LCSADSSTAENVLTEGFK---DKVELVSVPNQLDCLVRLQLGEVDALVTDGALGEGQLAQ 255 Query: 208 ND-----------RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 + P++ D + A+ Q V+ + Sbjct: 256 DPSLDMQGGPDENNPADR----DSPAWEYYGIAMNQDSPRLVARVNKILEDFRADQWQVT 311 Query: 257 TQKNINQVSK-DTTNPDVQRFLGID 280 K K + DV+ LG Sbjct: 312 YTKWFGAGEKVEPPKADVKINLGTP 336 >gi|307130005|ref|YP_003882021.1| amino acid ABC transporter periplasmic amino acid-binding protein [Dickeya dadantii 3937] gi|306527534|gb|ADM97464.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Dickeya dadantii 3937] Length = 273 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 53/280 (18%), Positives = 94/280 (33%), Gaps = 22/280 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L L F S + S L +K+ G ++ + F+ + GFD Sbjct: 1 MKKLLALMALGLSACFMLSAAQAGSTLDRVKQTGVVRNVLFNDYPPFSYLDDKNQLVGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A++ + ++++ + + D+ + R + L F Sbjct: 61 VDIANAVAQKLG---ARLELATPGWETIVGGKWQGRWDMCICSMTPNAER--AKVLDFAT 115 Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE-- 177 Y I+HK K I S + LS + + G++ E L K F+ Sbjct: 116 PYYSTFAVLIVHKDEKNIQSAADLSNKKVGLGLGSSYENYLNKSLAIPGGKPIAFPFDHV 175 Query: 178 -----RVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 E R DA D K ++ + IL ++ + P A Sbjct: 176 QAVPTDEEMAFRNLALGPGKRLDAVISDRIT---AKPRIEKLPQLRILQELYA-EPNWIA 231 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 + +GD EW ++ A+ L + +D T Sbjct: 232 VDKGDPEWSKTLADAITALRADGTLKAIS--MKWFGEDIT 269 >gi|160900971|ref|YP_001566553.1| extracellular solute-binding protein [Delftia acidovorans SPH-1] gi|160366555|gb|ABX38168.1| extracellular solute-binding protein family 3 [Delftia acidovorans SPH-1] Length = 268 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 43/288 (14%), Positives = 89/288 (30%), Gaps = 31/288 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG-------FLKCGINTGLVGFAEVKAN 53 M K ++++ L L ++ L G++ Sbjct: 1 MKKRTLLAMVALSALLAACGKNESASTAAAPVAAPVPAAMTKLVIGLDDNFPPMGFRDDK 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 + GFD+D R + + ++ + P++ + L K++D L T R+ + Sbjct: 61 NEIVGFDIDMAREAAKRM---NVEVDFKPIDWSAKEAELVGKRVDALWNGLTITEERKKN 117 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + + Q I+ I + L+G + Q G++ + Sbjct: 118 IAF--TAPYMENHQIIIVRANSDIKDKAGLAGKVVGAQDGSSAVDAIKKDAAVAASFKDL 175 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 F A R DA D + + E+++L D + + Sbjct: 176 KTFGDNITALMDLSAGRLDAVVVD--EVVGRFHVAKKAGEYLVLEDNFGTEDYGVGLRKE 233 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ-RFLGID 280 DT E LG + + ++ KD ++ ++ G D Sbjct: 234 DT----------------EVLGKLEAALAEMKKDGKAAEIASKWFGKD 265 >gi|313890041|ref|ZP_07823676.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus pseudoporcinus SPIN 20026] gi|313121402|gb|EFR44506.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus pseudoporcinus SPIN 20026] Length = 274 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 38/274 (13%), Positives = 87/274 (31%), Gaps = 15/274 (5%) Query: 1 MYKDFFVSILCLIILFFTSF----STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K ++ + + + KK + G + V +G Sbjct: 1 MKKLVITLTTVVVSISLVACGKSQAPKGDSWKTYKKEKTITLGFDNTFVPMGYKDESGKN 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFDV+ +A+ + ++++ +N + L++ +ID++ T R+ + Sbjct: 61 TGFDVELAKAVFAEYG---IRVKFQAINWDLKETELKNGKIDMIWNGYSVTKERQAKVAF 117 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH---P 173 + Q + I S S + G ++ Q+ ++ Y K Sbjct: 118 --SNPYMKNEQVLVSKNAAHIKSFSDMKGKTLGAQSASSGYDAFTRYPKVLKDSVKGQDA 175 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 +E + + +R DA D ++ + + A + + Sbjct: 176 TQYETFTQGFIDLKNNRIDALLIDKVYANYYLKQEGDLEKYHMTKSDYAGEAFAVGVRKE 235 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 D +V + T + G Q+ N+ + Sbjct: 236 D---KTLVKMINKGFKTLYKNGKFQEISNKWFGE 266 >gi|294669321|ref|ZP_06734400.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308731|gb|EFE49974.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 265 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 47/265 (17%), Positives = 91/265 (34%), Gaps = 23/265 (8%) Query: 1 MYKDFFVSILCLIILFFT----------SFSTNASILGDIKKRGFLKCGINTGLVGFAEV 50 M K ++ C +L S A + + +N F + Sbjct: 3 MKKWLATALACSALLTACGGQGQNQGQESAPAGAQGGEKV-----YRVAMNAEFAPFEFM 57 Query: 51 KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 + + +GFDVD A++ A K+++ F AL + +DIL+ T R Sbjct: 58 DSANNIQGFDVDLVNAMAKA---GNFKVEFKHQPWDSLFPALGNGDVDILASAVTITDDR 114 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTELTLADYFKAHNM 169 + ++ Y Q ++ + K I S L + V GTT +L + + + Sbjct: 115 KQTMDF--SDPYYKITQVILVPQGKTIKSAEDLKQVNKVGVVTGTTGDLAASKTLGSDST 172 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 K FE + + DA D + + N ++ ++ A Sbjct: 173 KI--ARFENIILVTKELENGGLDAVISDSAVIANYIKNNGSKGFSMVEIPDFTEENYGFA 230 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEEL 254 + +GDT +++ + + E Sbjct: 231 VRKGDTATVAMLNDALKKVRESGEY 255 >gi|259507458|ref|ZP_05750358.1| glutamate ABC superfamily ATP binding cassette transporter, binding protein [Corynebacterium efficiens YS-314] gi|259164946|gb|EEW49500.1| glutamate ABC superfamily ATP binding cassette transporter, binding protein [Corynebacterium efficiens YS-314] Length = 289 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 40/251 (15%), Positives = 80/251 (31%), Gaps = 19/251 (7%) Query: 13 IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72 I L S L + G + G G + G DVD + + ++I Sbjct: 17 ITLTACGDSEGGDGLLAAIENGNVTIGTKYDQPGLGLRNPDNSMSGLDVDVAQYVVNSIA 76 Query: 73 DDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 DD +++ + +R +Q+ ++D+++ R S + F Q Sbjct: 77 DDNGWDHPTVEWRETPSAQRETLIQNGEVDMIAATYSINPGR--SESVNFGGPYLLTHQA 134 Query: 129 FIMH-KKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 ++ I ++ L G +C G+T + D ++ A Sbjct: 135 LLVREDDDRIQTLEDLDDGLILCSVTGSTPAQKVKDVLP----GVQLQEYDTYSSCVEAL 190 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVIL-----PDIISKSPLAPAIIQGDTEWYNIV 241 DA T D + L+ + E ++ + + I + DTE + + Sbjct: 191 SQGNVDAMTTDATILFGYAQQRE--GEFRVVEMEQDGEPFTNEYYGIGITKDDTEATDAI 248 Query: 242 SWTHYAMVTAE 252 + M Sbjct: 249 NAALERMYADG 259 >gi|89099280|ref|ZP_01172158.1| hypothetical protein B14911_08355 [Bacillus sp. NRRL B-14911] gi|89086126|gb|EAR65249.1| hypothetical protein B14911_08355 [Bacillus sp. NRRL B-14911] Length = 263 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 65/258 (25%), Positives = 97/258 (37%), Gaps = 18/258 (6%) Query: 5 FFVSILCLIILFFTSFS-TNASILGDIKKRG-----FLKCGINTGLVGFAEVK-ANGD-W 56 F VSIL IL S AS G+ G L G + F + A GD Sbjct: 4 FLVSILAAGILAACGASEQPASSGGEAGDSGSDDEKVLIMGTSADYPPFEYIDTAKGDDI 63 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFDVD AL+ + K+Q + AL+S Q+DI+ T R+ ++ Sbjct: 64 IGFDVDLANALAEKLGY---KVQVEDIEFSGLVQALKSGQVDIVLAGMSPTEERKKNIDF 120 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 I Y + K GI + L G ++ VQ G+ E D A + Sbjct: 121 --TDIYYTARHMIVTKKDSGIEKLEDLKGKTVGVQLGSIQEGKANDI--AEEIDIKVENR 176 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 R+ EI R DA + + +N+ + VI + S A A+ + D+E Sbjct: 177 NRIPEIVQELMTGRFDAAIIEDTVATGYFESNEDLNGFVIEDEEELGS--AIALPK-DSE 233 Query: 237 WYNIVSWTHYAMVTAEEL 254 + + M + EL Sbjct: 234 LTDDFNKALQEMKDSGEL 251 >gi|260655474|ref|ZP_05860962.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Jonquetella anthropi E3_33 E1] gi|260629922|gb|EEX48116.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Jonquetella anthropi E3_33 E1] Length = 250 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 45/266 (16%), Positives = 96/266 (36%), Gaps = 18/266 (6%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K +++ L S + AS++ G + G + F + +G +G+DV Sbjct: 1 MKKLGSALVLLAAAVLGSSAWGASVMDK----GEIVVGTESTFPPFEFLSPDGKLQGYDV 56 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D A+ + K+ + ++ +L + +ID+++ + R +G + Sbjct: 57 DLAEAIGQKLGK---KVVWRDMSFDALIPSLLTGKIDLIAAGMSASPERAKRVGF--SDV 111 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y ++ I S++ L G ++ VQ GT E L +++ ++ Sbjct: 112 YYRATSVVVIAAGSPIKSLADLQGKTMAVQLGTIQETFLR-----GQPGVSVRAYQKYDD 166 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAIIQGDTEWYNI 240 R D D + D + V + A A+ +GD + + Sbjct: 167 CLREVVLGRADGAMMDETVAGEFLKQADFAGKIVSAFTQAAGESGQALAMPKGDETFISA 226 Query: 241 VSWTHYAMVTAEELGITQKNINQVSK 266 V+ A+ ++ G Q ++ K Sbjct: 227 VN---KALAELKQEGFLQALSDKWIK 249 >gi|317473005|ref|ZP_07932307.1| extracellular solute-binding protein, family 3 [Anaerostipes sp. 3_2_56FAA] gi|316899514|gb|EFV21526.1| extracellular solute-binding protein, family 3 [Anaerostipes sp. 3_2_56FAA] Length = 269 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 49/278 (17%), Positives = 87/278 (31%), Gaps = 21/278 (7%) Query: 1 MY-KDFFV----SILCLIILFFTSFSTNASILGD----IKKRGFLKCGINTGLVGFAEVK 51 M K V ++L +L S + +K L G++ Sbjct: 1 MRVKKLLVLCVSAVLAGSMLLAGCSKKEESKTDESLQYVKDNKELILGLDASFPPMGFTD 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 + GFD+D + ++ + K++ P+N + LQ K ID + + ++ Sbjct: 61 KDQKIVGFDIDMAKEVTKRMG---IKLKLQPINWDSKDQELQGKTIDCIWNGLTY--SKD 115 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 + + + Q ++ +K I S+ + + VQ G+T + Sbjct: 116 RAKEMLCSESYMDNHQVLLVPEKSKIKSLKDIKKQQVGVQKGSTAADAVDQ--TKELKNA 173 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + F EI CDA D + A P + IL D + Sbjct: 174 KIVYFGNNVEILNDLGNG-CDAAVMD--EVVAKYYAKKDPGKFKILNDNLITEKYVIGFR 230 Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 GD + V M L K +D T Sbjct: 231 TGDEKLKAEVEKQLKDMKKDGTLAKISK--KWFGEDLT 266 >gi|193069411|ref|ZP_03050366.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli E110019] gi|192957364|gb|EDV87812.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli E110019] Length = 248 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 52/267 (19%), Positives = 90/267 (33%), Gaps = 23/267 (8%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K L + L F S A L +T V F + + + GFDV Sbjct: 1 MKSVLKVSLAALTLAFAVSSHAADK--------KLVVATDTAFVPFEFKQGD-KYVGFDV 51 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D A++ + D + P++ ALQ+K +D+ T R+ ++ + Sbjct: 52 DLWAAIAKELKLD---YELKPMDFSGIIPALQTKNVDLALAGITITDERKKAIDFSDG-- 106 Query: 122 TYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G ++ + SV L G + V++GT + DY KA+ F ++ Sbjct: 107 YYKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNID 162 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +R DA D + T + + D + A +G E + Sbjct: 163 NAYMELGTNRADAVLHDTPNILYFIKTA-GSGQFKAVGDSLEAQQYGIAFPKGSDELRDK 221 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKD 267 V+ T E G + + Sbjct: 222 VNGALK---TLRENGTYNEIYKKWFGT 245 >gi|325479869|gb|EGC82954.1| ABC transporter, permease protein [Anaerococcus prevotii ACS-065-V-Col13] Length = 491 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 56/302 (18%), Positives = 101/302 (33%), Gaps = 35/302 (11%) Query: 1 MYKDFFVSILCLIIL-FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K F+ + + IL F AS DI G + G + + + + + G Sbjct: 1 MRKKFYRILSTIFILTMFLPVRAFAS--EDIVDDGVIDLGTSADFPPYEYYEGD-EIVGI 57 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D D +A+ + + I+ ++ ++QS +ID + T R+ S+ Sbjct: 58 DPDIIKAIGDYLGVE---IKLHDMDFNNIIASIQSGKIDGGAAGFTVTEERKKSVNFTDS 114 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSG-ASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Q I K I+ V L I Q GT + D F N F + Sbjct: 115 FT--KTSQIIIKRKDSDINDVEDLKDKKKIGTQLGTIGDTIAKDDFGEEN----VTSFNK 168 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 V + + ++ + DA D + +N + I+ + A AI + + E Sbjct: 169 VPDAILSLQSKKIDAVILDEQSAKNFTSSNK---DLEIVDTPYLEEEYAIAISKDNPELL 225 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298 ++ A+ + E+ + S N LGL + Sbjct: 226 EKMNEAIAALKESGEIDKIMAKY------------------EASDNANSDLGLLGRFKAN 267 Query: 299 II 300 I+ Sbjct: 268 IL 269 >gi|270291924|ref|ZP_06198139.1| polar amino acid uptake (PAAT) family ABC transporter, amino acid-binding protein [Streptococcus sp. M143] gi|270279452|gb|EFA25294.1| polar amino acid uptake (PAAT) family ABC transporter, amino acid-binding protein [Streptococcus sp. M143] Length = 268 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 48/273 (17%), Positives = 91/273 (33%), Gaps = 19/273 (6%) Query: 3 KDFFVSILCLII--LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWK 57 K +++ L++ L F +T + + IK +G L +N F V Sbjct: 5 KKVLMTMFGLLMFPLLFACSNTQSQGVEAIKAKGKLVVALNPEFAPFEYQKLVDGKNQIV 64 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G DV+ +A++ + + +++ P++ +L S + D+ T R S Sbjct: 65 GSDVELAKAIAKELGVE---VEFSPMSFDNVLASLDSGKADLAISGVSKTEER--SQVYD 119 Query: 118 FRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F Y I+ K SV L+ + Q G+ E K + Sbjct: 120 FSIPYYTSKNKVIVRKSELTNYQSVQDLAQKKVGAQKGSIQET----LAKETLQDSSLVS 175 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + ++ + DA + N + D + A A+ + Sbjct: 176 LPKNGNLITDLKSGQLDAVIFEEPVAKGFVENNPDLAIAEFDFDNDKEDSYAVAMKKDSK 235 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 E V T + + EL K I+ K + Sbjct: 236 ELKEAVDKTIQKLKDSGELD---KLIDDAFKAS 265 >gi|227517724|ref|ZP_03947773.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding/permease protein [Enterococcus faecalis TX0104] gi|229546597|ref|ZP_04435322.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding/permease protein [Enterococcus faecalis TX1322] gi|229548704|ref|ZP_04437429.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding/permease protein [Enterococcus faecalis ATCC 29200] gi|255971218|ref|ZP_05421804.1| amino acid ABC transporter [Enterococcus faecalis T1] gi|255973841|ref|ZP_05424427.1| aminoacid ABC transporter [Enterococcus faecalis T2] gi|256617647|ref|ZP_05474493.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis ATCC 4200] gi|256854374|ref|ZP_05559738.1| amino acid ABC transporter [Enterococcus faecalis T8] gi|256957372|ref|ZP_05561543.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis DS5] gi|256959892|ref|ZP_05564063.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis Merz96] gi|257086118|ref|ZP_05580479.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis D6] gi|257089189|ref|ZP_05583550.1| ABC amino acid transporter [Enterococcus faecalis CH188] gi|257415331|ref|ZP_05592325.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis AR01/DG] gi|257421017|ref|ZP_05598007.1| ABC amino acid transporter [Enterococcus faecalis X98] gi|293384723|ref|ZP_06630577.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Enterococcus faecalis R712] gi|293387465|ref|ZP_06632017.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Enterococcus faecalis S613] gi|294781574|ref|ZP_06746911.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1] gi|300862075|ref|ZP_07108155.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD Ef11] gi|307269814|ref|ZP_07551144.1| ABC transporter, permease protein [Enterococcus faecalis TX4248] gi|307276261|ref|ZP_07557389.1| ABC transporter, permease protein [Enterococcus faecalis TX2134] gi|307284476|ref|ZP_07564638.1| ABC transporter, permease protein [Enterococcus faecalis TX0860] gi|307289545|ref|ZP_07569490.1| ABC transporter, permease protein [Enterococcus faecalis TX0109] gi|312900356|ref|ZP_07759667.1| ABC transporter, permease protein [Enterococcus faecalis TX0470] gi|312904217|ref|ZP_07763379.1| ABC transporter, permease protein [Enterococcus faecalis TX0635] gi|312908578|ref|ZP_07767521.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512] gi|312910503|ref|ZP_07769348.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516] gi|312951870|ref|ZP_07770759.1| ABC transporter, permease protein [Enterococcus faecalis TX0102] gi|227074829|gb|EEI12792.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding/permease protein [Enterococcus faecalis TX0104] gi|229306170|gb|EEN72166.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding/permease protein [Enterococcus faecalis ATCC 29200] gi|229308287|gb|EEN74274.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding/permease protein [Enterococcus faecalis TX1322] gi|255962236|gb|EET94712.1| amino acid ABC transporter [Enterococcus faecalis T1] gi|255966713|gb|EET97335.1| aminoacid ABC transporter [Enterococcus faecalis T2] gi|256597174|gb|EEU16350.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis ATCC 4200] gi|256709934|gb|EEU24978.1| amino acid ABC transporter [Enterococcus faecalis T8] gi|256947868|gb|EEU64500.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis DS5] gi|256950388|gb|EEU67020.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis Merz96] gi|256994148|gb|EEU81450.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis D6] gi|256998001|gb|EEU84521.1| ABC amino acid transporter [Enterococcus faecalis CH188] gi|257157159|gb|EEU87119.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis ARO1/DG] gi|257162841|gb|EEU92801.1| ABC amino acid transporter [Enterococcus faecalis X98] gi|291077973|gb|EFE15337.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Enterococcus faecalis R712] gi|291083116|gb|EFE20079.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Enterococcus faecalis S613] gi|294451352|gb|EFG19817.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1] gi|295114022|emb|CBL32659.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)/amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Enterococcus sp. 7L76] gi|300848600|gb|EFK76357.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD Ef11] gi|306499506|gb|EFM68878.1| ABC transporter, permease protein [Enterococcus faecalis TX0109] gi|306503153|gb|EFM72407.1| ABC transporter, permease protein [Enterococcus faecalis TX0860] gi|306507061|gb|EFM76203.1| ABC transporter, permease protein [Enterococcus faecalis TX2134] gi|306513924|gb|EFM82526.1| ABC transporter, permease protein [Enterococcus faecalis TX4248] gi|310625464|gb|EFQ08747.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512] gi|310630168|gb|EFQ13451.1| ABC transporter, permease protein [Enterococcus faecalis TX0102] gi|310632313|gb|EFQ15596.1| ABC transporter, permease protein [Enterococcus faecalis TX0635] gi|311289199|gb|EFQ67755.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516] gi|311292544|gb|EFQ71100.1| ABC transporter, permease protein [Enterococcus faecalis TX0470] gi|315025741|gb|EFT37673.1| ABC transporter, permease protein [Enterococcus faecalis TX2137] gi|315031474|gb|EFT43406.1| ABC transporter, permease protein [Enterococcus faecalis TX0017] gi|315036139|gb|EFT48071.1| ABC transporter, permease protein [Enterococcus faecalis TX0027] gi|315145263|gb|EFT89279.1| ABC transporter, permease protein [Enterococcus faecalis TX2141] gi|315148141|gb|EFT92157.1| ABC transporter, permease protein [Enterococcus faecalis TX4244] gi|315151540|gb|EFT95556.1| ABC transporter, permease protein [Enterococcus faecalis TX0012] gi|315153184|gb|EFT97200.1| ABC transporter, permease protein [Enterococcus faecalis TX0031] gi|315154902|gb|EFT98918.1| ABC transporter, permease protein [Enterococcus faecalis TX0043] gi|315161961|gb|EFU05978.1| ABC transporter, permease protein [Enterococcus faecalis TX0645] gi|315164648|gb|EFU08665.1| ABC transporter, permease protein [Enterococcus faecalis TX1302] gi|315170674|gb|EFU14691.1| ABC transporter, permease protein [Enterococcus faecalis TX1342] gi|315578044|gb|EFU90235.1| ABC transporter, permease protein [Enterococcus faecalis TX0630] gi|323479955|gb|ADX79394.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis 62] gi|327534349|gb|AEA93183.1| amino acid ABC superfamily ATP binding cassette transporter, binding/permease protein [Enterococcus faecalis OG1RF] gi|329577603|gb|EGG59036.1| ABC transporter, permease protein [Enterococcus faecalis TX1467] Length = 722 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 51/275 (18%), Positives = 92/275 (33%), Gaps = 16/275 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + F+ ++++ +F + S + KK G + F + G + G D Sbjct: 1 MKRKHFLLSFFVMMVTLLTFISGTSAHAEGKK---YTIGTDLTFAPFEFQDSKGKYIGID 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A++ ++ PL A+QSKQID + T R+ S F Sbjct: 58 VDLLDAIAKD---QGFEVDLKPLGFDSAVQAIQSKQIDGMIAGMSITDERKKS--FDFSD 112 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G + K I S L G ++ + GT + L Y F+ Sbjct: 113 PYFDSGLQLAVKKGNDKIKSYDDLKGKTVAAKVGTESANFLEKN--KEKYDYTIKNFDDA 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + A DA D L + ++ D + S A+ +G Sbjct: 171 TGLYKALENGEADAIVDDYPVLGYAV---KNGQKLQLVGDKETGSSYGFAVKKGQNP--E 225 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 ++ + + ++ G K +N + Q Sbjct: 226 LIKKFNAGLKNLKDNGTYDKILNNYLATGDETNTQ 260 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 43/260 (16%), Positives = 88/260 (33%), Gaps = 17/260 (6%) Query: 18 TSFSTNASILGDIK-KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 T+ + I K+ ++ F A GD+ G DVD + ++ + Sbjct: 257 TNTQDAGEQMKKITPKKEKYVIASDSTFAPFEFQNAQGDYVGIDVDLVKR-AAELQGFTV 315 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KK 135 + +++ ++ A++S Q D + T R+ + F + G + K Sbjct: 316 EFKFIGFSSA--VQAVESGQADGMVAGMTITDDRKKA--FDFSVPYFDSGIQIAVKKGND 371 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I S L G + V+ GT + L Y + + + +A DA Sbjct: 372 KIKSYDDLKGKKVGVKIGTESADFLEKN--KKKYDYSIKYLDTTDALYSALEIGEVDAM- 428 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEEL 254 D + + ++P I + A+ + + E + + M E Sbjct: 429 MDDYPVIGYGVAQNQPLATPIPREKGGS--YGFAVKKGQNPELLEMFNEGLKEMKRTGEY 486 Query: 255 ----GITQKNINQVSKDTTN 270 G K+ N+ ++T + Sbjct: 487 DKIIGTYVKDGNEAKEETAD 506 >gi|257059355|ref|YP_003137243.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 8802] gi|256589521|gb|ACV00408.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 8802] Length = 302 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 46/288 (15%), Positives = 106/288 (36%), Gaps = 23/288 (7%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDD 74 S + +++ + + G L G L+ ++ + G+ + + + Sbjct: 19 AKTSLSETVIEKVARTGVLTAGSRLNLIPYSYFNDKEELDGYSLAVLNLIREDLEKQLGK 78 Query: 75 PSKIQYLP-LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 P K++ + + ER L S IDI +T R+ + + G ++ K Sbjct: 79 PIKLEIIEAQDISERIPKLMSGDIDISCDTV-FTWERDKFVDFSLS--YGVSGVRLLVPK 135 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 + + L G + + T + D K K I E A +A + DA Sbjct: 136 NSTLGTPESLEGKRVAIIPHTV----IGDTIKLVQPKATLIPVNNFTEGIEALKAGKVDA 191 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAIIQGDTEWYNIVSWTHYAMVTAE 252 GD L + + + ++P+ +A + +G++ + N+V+++ ++ Sbjct: 192 IAGDSIILDGERQRL-KSDNYQLVPEDPYARYGIACMVPEGNSTFLNLVNYSIAKLMQGY 250 Query: 253 ELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 +G + ++ + R++G + I + + + Y II Sbjct: 251 LIG------DPKYQEI----INRWIGPEGVVTIVKPEAIKDFFEYTII 288 >gi|167815972|ref|ZP_02447652.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 91] Length = 264 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 58/272 (21%), Positives = 101/272 (37%), Gaps = 19/272 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K V+ L + F + + A +L ++K+RG L+ G+ F G+ GFDVD Sbjct: 7 KKLLVTGL-IGASFAAATAHAADLLDEVKQRGTLRIGLEGTFPPFNSKNPQGELVGFDVD 65 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 +A+++ + P +++ LQ+ + D++ T R+ +L P Sbjct: 66 IAKAIAAKLGVKP---EFVTTEWSGIIAGLQAGKFDVIVNQVGITDPRKQTLDF--SPAY 120 Query: 123 YFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 F I K S+ L G + V G T + +A ++K +P Sbjct: 121 TFSSAQLIQRKDDARQFKSLEDLKGKKLGVALG-TNYMDMAKSVPGIDVKTYPGA----P 175 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E A R DA D L L P ++ S +P +G+ ++ Sbjct: 176 EYLRDLAAGRLDAALNDRLMLAYLTKNAQLP--LRPGANVGSANPSGIPFKKGNPKFAKA 233 Query: 241 VSWTHYAMVTAEELGITQKNINQVSK-DTTNP 271 ++ AM E K ++ D T P Sbjct: 234 IAD---AMTQLEADSTFTKISDKWFGIDVTKP 262 >gi|262368132|pdb|3K4U|A Chain A, Crystal Structure Of Putative Binding Component Of Abc Transporter From Wolinella Succinogenes Dsm 1740 Complexed With Lysine gi|262368133|pdb|3K4U|B Chain B, Crystal Structure Of Putative Binding Component Of Abc Transporter From Wolinella Succinogenes Dsm 1740 Complexed With Lysine gi|262368134|pdb|3K4U|C Chain C, Crystal Structure Of Putative Binding Component Of Abc Transporter From Wolinella Succinogenes Dsm 1740 Complexed With Lysine gi|262368135|pdb|3K4U|D Chain D, Crystal Structure Of Putative Binding Component Of Abc Transporter From Wolinella Succinogenes Dsm 1740 Complexed With Lysine gi|262368136|pdb|3K4U|E Chain E, Crystal Structure Of Putative Binding Component Of Abc Transporter From Wolinella Succinogenes Dsm 1740 Complexed With Lysine gi|262368137|pdb|3K4U|F Chain F, Crystal Structure Of Putative Binding Component Of Abc Transporter From Wolinella Succinogenes Dsm 1740 Complexed With Lysine Length = 245 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 47/241 (19%), Positives = 87/241 (36%), Gaps = 17/241 (7%) Query: 33 RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92 RG L+ G+ G + F G+ GFDVD R + A K++ +P + L Sbjct: 4 RGELRVGLEPGYLPFEXKDKKGNVIGFDVDLAREXAKAXG---VKLKLVPTSWDGLIPGL 60 Query: 93 QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGA--SI 148 +++ DI+ + R + + GQ ++ K KG+ S L ++ Sbjct: 61 VTEKFDIIISGXTISQERNLRVNFVE--PYIVVGQSLLVKKGLEKGVKSYKDLDKPELTL 118 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 + G + E FK ++ E + D + D+ A Sbjct: 119 VTKFGVSAEYAAKRLFKNA----KLKTYDTEAEAVQEVLNGKADXFIFDLPFNVAFXAQ- 173 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 V L ++ PL AI +GD ++ +W ++ + + G + + DT Sbjct: 174 KGQGYLVHLDTSLTYEPLGWAIKKGDPDFL---NWLNHFLAQIKHDGSYDELYERWFVDT 230 Query: 269 T 269 Sbjct: 231 K 231 >gi|16125690|ref|NP_420254.1| cystine transporter subunit [Caulobacter crescentus CB15] gi|13422806|gb|AAK23422.1| cystine ABC transporter, periplasmic cystine-binding protein [Caulobacter crescentus CB15] Length = 261 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 48/239 (20%), Positives = 81/239 (33%), Gaps = 12/239 (5%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 AS IK G L+ G+ F +G GF+VDF +AL+ + K ++ Sbjct: 27 AGASGWDRIKASGKLRVGLEGTYPPFNFQDKSGQLAGFEVDFAKALAEQLG---VKAEFS 83 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 P +L+S +ID++ T R+ + P T Q + K + Sbjct: 84 PAPFAGLLGSLESGRIDVVINQITITPDRQAKYDFSE-PYTVSGIQIIALKGKPAPTGPE 142 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L+G + V GT E L + ++ RA R DA D Sbjct: 143 GLTGKKVGVGLGTNYEQWLRANVPTAD----VRTYDDDPTKYQDLRAGRIDAVLNDRLVA 198 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 T+ E V + A+ + D +++ A+ +L + Sbjct: 199 ADFVKTSP---EFVASGQPFAAQGSGVAMQK-DPALKVVINQAINALRANGKLAAISQQ 253 >gi|307701932|ref|ZP_07638941.1| ABC transporter substrate-binding protein - glutamine-binding protein [Streptococcus mitis NCTC 12261] gi|307616747|gb|EFN95935.1| ABC transporter substrate-binding protein - glutamine-binding protein [Streptococcus mitis NCTC 12261] Length = 271 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 44/276 (15%), Positives = 93/276 (33%), Gaps = 23/276 (8%) Query: 1 MYKDFFVSILCLIILFF------TSFSTNASILGDIKKRGFLKCGINTGLVGF---AEVK 51 M ++ +LC + F + + + S + IK++G L + F + V Sbjct: 1 MKSKKWIFVLCSFLASFFLVACQSGSNGSQSAVEAIKQKGKLVVATSPDYAPFEFQSLVD 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G D+D +A++ + K++ ++ +LQ+ + D+ T R Sbjct: 61 GKNQVVGADIDMAQAIADELG---VKLEISSMSFDNVLTSLQTGKADLAVAGISATDER- 116 Query: 112 ISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 F Y + F++ K ++ L A+I Q GT E + + Sbjct: 117 -KEVFDFSIPYYENKISFLVRKSDVEKYKDLTSLESANIAAQKGTVPEAMVKEQLPKAQ- 174 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + E +A + DA D + N + + + A A Sbjct: 175 ---LTSLTNMGEAVNELQAGKVDAVHMDEPVALSYAAKNADLAVATVSLKMKDGEANAVA 231 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 + + + +V ++ G QK + + + Sbjct: 232 LRKNSADLKEVVDKVIQ---KLKDDGTYQKYLEKAA 264 >gi|218688597|ref|YP_002396809.1| glutamine ABC transporter periplasmic protein [Escherichia coli ED1a] gi|331656832|ref|ZP_08357794.1| glutamine-binding periplasmic protein (GlnBP) [Escherichia coli TA206] gi|218426161|emb|CAR06981.1| glutamine transporter subunit ; periplasmic binding component of ABC superfamily [Escherichia coli ED1a] gi|331055080|gb|EGI27089.1| glutamine-binding periplasmic protein (GlnBP) [Escherichia coli TA206] Length = 248 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 51/267 (19%), Positives = 90/267 (33%), Gaps = 23/267 (8%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K L + L F S A L +T V F + + + GFDV Sbjct: 1 MKSVLKVSLAALTLAFAVSSHAADK--------KLVVATDTAFVPFEFKQGD-KYVGFDV 51 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D A++ + D + P++ ALQ+K +D+ T R+ ++ + Sbjct: 52 DLWAAIAKELKLD---YELKPMDFSGIIPALQTKNVDLALAGITITDERKKAIDFSDG-- 106 Query: 122 TYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G ++ + SV L G + V++GT + DY KA+ F ++ Sbjct: 107 YYKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNID 162 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +R DA D + T + + D + A +G E + Sbjct: 163 NAYMELGTNRADAVLHDTPNILYFIKTAGN-GQFKAVGDSLEAQQYGIAFPKGSDELRDK 221 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKD 267 ++ T E G + + Sbjct: 222 INGALK---TLRENGTYNEIYKKWFGT 245 >gi|170017620|ref|YP_001728539.1| amino acid ABC transporter periplasmic protein [Leuconostoc citreum KM20] gi|169804477|gb|ACA83095.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Leuconostoc citreum KM20] Length = 283 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 47/288 (16%), Positives = 96/288 (33%), Gaps = 29/288 (10%) Query: 1 MYKDF---------FVSILCLIILFF---------TSFSTNASILGDIKKRGFLKCGINT 42 M + F++I+ IL T + IK+ + G++ Sbjct: 4 MKRKIIVNTLVGLAFLAIVIWAILSLGVGNKQNKDTQATAQKDDWQRIKQEKQITIGLDD 63 Query: 43 GLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102 V G+ GFDVD A+ ++ K+++ P++ + L + ID + Sbjct: 64 TFVPMGFRNKEGNIVGFDVDLANAVFKSM---DIKVKWQPIDWSMKETELNTGNIDAIWN 120 Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162 T R + +AF + Q + KK I+ S + G + Q ++ + Sbjct: 121 GYTKTTAR--AKQVAFSDTYHRATQVLVTLKKNNINRFSDMKGKVLGDQTASSGDEGFNK 178 Query: 163 Y---FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219 Y K + + ++ ++ A R D D P ++ + Sbjct: 179 YPDVLKQYVKDQKVVGYDTFDKAFNDLNAGRIDGLLIDEDYARYYVAHQPNPKDYTVTVG 238 Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 A + D + V+ A+ ++ G Q+ N+ + Sbjct: 239 AFPVDMTAVGFRKSDNKLREAVN---KALTQFKKDGRLQQIENKWFAN 283 >gi|82776110|ref|YP_402457.1| glutamine ABC transporter periplasmic protein [Shigella dysenteriae Sd197] gi|309786522|ref|ZP_07681145.1| glutamine-binding periplasmic protein [Shigella dysenteriae 1617] gi|81240258|gb|ABB60968.1| periplasmic glutamine-binding protein [Shigella dysenteriae Sd197] gi|308925585|gb|EFP71069.1| glutamine-binding periplasmic protein [Shigella dysenteriae 1617] Length = 248 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 53/268 (19%), Positives = 93/268 (34%), Gaps = 24/268 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M VS+ L + F S + L +T V F + + + GFD Sbjct: 1 MKSVLKVSLAALTLAFAVSSHA----VDK-----KLVVATDTAFVPFEFKQGD-KYVGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A++ + D + P++ ALQ+K +D+ T R+ ++ + Sbjct: 51 VDLWAAIAKELKLD---YELKPMDFSGIIPALQTKNVDLALAGITITDERKKAIDFSDG- 106 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G ++ + SV L G + V++GT + DY KA+ F + Sbjct: 107 -YYKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNI 161 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + +R DA D + T S+ + D + A +G E + Sbjct: 162 DNAYMELGTNRADAVLHDTPNILYFIKTAGN-SQFKAVGDSLEAQQYGIAFPKGSDELRD 220 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKD 267 V+ T E G + + Sbjct: 221 KVNGALK---TLRENGTYNEIYKKWFGT 245 >gi|19553156|ref|NP_601158.1| glutamate ABC-type transporter, periplasmic component [Corynebacterium glutamicum ATCC 13032] gi|62390791|ref|YP_226193.1| glutamate binding protein [Corynebacterium glutamicum ATCC 13032] gi|1346149|sp|P48242|GLUB_CORGL RecName: Full=Glutamate-binding protein; Flags: Precursor gi|732702|emb|CAA57061.1| gluB [Corynebacterium glutamicum] gi|21324721|dbj|BAB99344.1| ABC-type transporter, periplasmic component (glutamate) [Corynebacterium glutamicum ATCC 13032] gi|41326129|emb|CAF20292.1| GLUTAMATE SECRETED BINDING PROTEIN [Corynebacterium glutamicum ATCC 13032] Length = 295 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 41/270 (15%), Positives = 86/270 (31%), Gaps = 29/270 (10%) Query: 3 KDFFV---SILCLIILFFTSFSTNASI------LGDIKKRGFLKCGINTGLVGFAEVKAN 53 K F +IL L + + L I + G + G G + Sbjct: 4 KRTFTRIGAILGATALAGVTLTACGDSSGGDGFLAAI-ENGSVNVGTKYDQPGLGLRNPD 62 Query: 54 GDWKGFDVDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 G DVD + ++I DD I++ + +R +Q+ ++D+++ Sbjct: 63 NSMSGLDVDVAEYVVNSIADDKGWDHPTIEWRESPSAQRETLIQNGEVDMIAATYSINAG 122 Query: 110 REISLGLAFRPITYFDGQGFIMH-KKKGISSVSQL-SGASICVQAGTTTELTLADYFKAH 167 R S + F Q ++ I ++ L +G +C +G+T + D Sbjct: 123 R--SESVNFGGPYLLTHQALLVRQDDDRIETLEDLDNGLILCSVSGSTPAQKVKDVLP-- 178 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL-----PDIIS 222 ++ A DA T D + L+ + + ++ + + Sbjct: 179 --GVQLQEYDTYSSCVEALSQGNVDALTTDATILFGYSQQYE--GDFRVVEMEKDGEPFT 234 Query: 223 KSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 + + D E + ++ M Sbjct: 235 DEYYGIGLKKDDQEGTDAINAALERMYADG 264 >gi|146310956|ref|YP_001176030.1| glutamine ABC transporter periplasmic protein [Enterobacter sp. 638] gi|145317832|gb|ABP59979.1| L-glutamine-binding protein [Enterobacter sp. 638] Length = 247 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 53/267 (19%), Positives = 89/267 (33%), Gaps = 24/267 (8%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K L + L F S A L +T V F + + + GFDV Sbjct: 1 MKSVLKVSLAALTLAFAVSSQAAD---------KLVVATDTAFVPFEFKQGD-KYVGFDV 50 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D A++ + D P++ ALQ+K ID+ T R+ ++ + Sbjct: 51 DLWAAIAKELKLD---YTLKPMDFSGIIPALQTKNIDLALAGITITEERKKAIEFSDG-- 105 Query: 122 TYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G ++ + SV L G + V++GT + DY KA+ F ++ Sbjct: 106 YYKSGLLLMVKADNNDVKSVKDLDGKIVAVKSGTGSV----DYAKANIKTKDLRQFPNID 161 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +R DA D + T + + + + A +G E N Sbjct: 162 NAYMELGTNRADAVLHDTPNILYFIKTAGN-GKFKAVGESLEAQQYGIAFPKGSDELRNK 220 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKD 267 V+ T E G + + Sbjct: 221 VNGALK---TLRENGTYNEIYKKWFGT 244 >gi|293364416|ref|ZP_06611142.1| polar amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus oralis ATCC 35037] gi|307702619|ref|ZP_07639571.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus oralis ATCC 35037] gi|291317262|gb|EFE57689.1| polar amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus oralis ATCC 35037] gi|307623735|gb|EFO02720.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus oralis ATCC 35037] Length = 268 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 48/273 (17%), Positives = 91/273 (33%), Gaps = 19/273 (6%) Query: 3 KDFFVSILCLII--LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWK 57 K +++ L++ L F +T + + IK +G L +N F V Sbjct: 5 KKVLMTMFGLLMFPLLFACSNTQSQGVEAIKAKGKLVVALNPEFAPFEYQKLVDGKNQIV 64 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G DV+ +A++ + + +++ P++ +L S + D+ T R S Sbjct: 65 GSDVELAKAIAKELGVE---VEFSPMSFDNVLASLDSGKADLAISGVSKTEER--SQVYD 119 Query: 118 FRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F Y I+ K SV L+ + Q G+ E K + Sbjct: 120 FSIPYYTSKNKVIVRKSELTNYQSVQDLAQKKVGAQKGSIQET----LAKETLQNSSLVS 175 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + ++ + DA + N + D + A A+ + Sbjct: 176 LPKNGNLITDLKSGQLDAVIFEEPVAKGFVENNPDLAIAEFDFDNDKEDSYAVAMKKDSK 235 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 E V T + + EL K I+ K + Sbjct: 236 ELKEAVDKTIQKLKDSGELD---KLIDDAFKAS 265 >gi|223932262|ref|ZP_03624265.1| extracellular solute-binding protein family 3 [Streptococcus suis 89/1591] gi|223898943|gb|EEF65301.1| extracellular solute-binding protein family 3 [Streptococcus suis 89/1591] Length = 266 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 91/259 (35%), Gaps = 12/259 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI--LGDIKKRGFLKCGINTGLVGFAE---VKANGD 55 M K ++ L L + S+ +S L IK++G L + F V + Sbjct: 1 MKKILALAATVLAGLTLVACSSTSSQSALDKIKEKGTLVVATSPDYAPFEFQALVDGKNE 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G D+ + ++ + K++ ++ ++Q+ + DI ++ R Sbjct: 61 VVGADIMLAQKIADELG---VKLEVSAMSFDNVLSSVQNGKADIAIAGLSYSEERAKVFD 117 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + D ++S+ +SG ++ VQ G+T E + N+ ++ Sbjct: 118 FSESYYQISDVLLIKKDSDNSLTSIDAMSGKTLAVQKGSTQESYAQENISQANLISLTLM 177 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 E V E ++ + DA D N + + I ++ A+ +G T Sbjct: 178 GEAVNE----LKSGKVDAILMDSPVAAGYVSQNSDLAVASVEFPTIDENSKVIALPKGST 233 Query: 236 EWYNIVSWTHYAMVTAEEL 254 E + + + E Sbjct: 234 ELKTAIDKVIAEVKASGEF 252 >gi|307711103|ref|ZP_07647525.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus mitis SK321] gi|307617065|gb|EFN96243.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus mitis SK321] Length = 268 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 46/274 (16%), Positives = 89/274 (32%), Gaps = 18/274 (6%) Query: 1 MYKDFFVSI-LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56 M K L ++ L F + ++ + IK +G L +N F V Sbjct: 4 MKKVLMTMFGLVMLPLLFACSNNQSAGIEAIKSKGKLVVALNPDFAPFEYQKVVDGKNQI 63 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G D++ +A+++ + + ++ P++ ++QS + D+ T R S Sbjct: 64 VGSDIELAKAIATELGVE---LELSPMSFDNVLASVQSGKADLAISGVSKTDER--SKVF 118 Query: 117 AFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F Y I+ K SV L+ + Q G+ E D + Sbjct: 119 DFSTPYYTSKNKLIVKKSDLATYQSVKDLAQKKVGAQKGSIQETMAKDLL----QNSSLV 174 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + ++ + DA + N + + + A A+ + Sbjct: 175 SLPKNGNLITDLKSGQVDAVIFEEPVAKGFVENNPDLAIADLNFEKEQDDSYAVAMKKDS 234 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 E V T + + EL K I K + Sbjct: 235 KELKEAVDKTIQKLKESGELD---KLIEDAFKAS 265 >gi|223939004|ref|ZP_03630889.1| extracellular solute-binding protein family 3 [bacterium Ellin514] gi|223892300|gb|EEF58776.1| extracellular solute-binding protein family 3 [bacterium Ellin514] Length = 278 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 49/258 (18%), Positives = 90/258 (34%), Gaps = 24/258 (9%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K+ F+ L +I S K L G+ F G+ G VD Sbjct: 20 KNAFIICLAVICFITAGCSQ--------KAHDKLIVGMELSYPPFEMTDEKGNPAGISVD 71 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + L + +++ AL++ +ID++ + T R S+ Sbjct: 72 LAQTLGKYL---NREVEIQNTPFDGLIPALKTGKIDLIISSMTATPERAQSIDF--SDPY 126 Query: 123 YFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 G +++K I S+ L G ++ V+ GTT Y + + +V ++ Sbjct: 127 LRTGLCLLVNKNSSIQSIQDLDQPGKTVAVKKGTTG----HTYATGNMKQAKVLVLDKES 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + DA+ D + Y N+ + ++ P + A I +G+TE + Sbjct: 183 ACVLEVVQGKADAFIYDQMSTYQNWKHNEETTRPILKP--FKEESWAVGIQKGNTELQSK 240 Query: 241 VSWTHYAMVT---AEELG 255 V+ EELG Sbjct: 241 VNQFLKDFKNRGGFEELG 258 >gi|16759748|ref|NP_455365.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16764192|ref|NP_459807.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29142479|ref|NP_805821.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|161614918|ref|YP_001588883.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167550477|ref|ZP_02344234.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167992066|ref|ZP_02573164.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168230732|ref|ZP_02655790.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168236762|ref|ZP_02661820.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168240698|ref|ZP_02665630.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168466431|ref|ZP_02700293.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168820020|ref|ZP_02832020.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194442423|ref|YP_002040066.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194450493|ref|YP_002044858.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194470062|ref|ZP_03076046.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194738210|ref|YP_002113921.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197248579|ref|YP_002145786.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197264430|ref|ZP_03164504.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|200390987|ref|ZP_03217598.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204929924|ref|ZP_03220945.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|207856266|ref|YP_002242917.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213163837|ref|ZP_03349547.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213423458|ref|ZP_03356440.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213424777|ref|ZP_03357527.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213649899|ref|ZP_03379952.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213859569|ref|ZP_03385273.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|238913896|ref|ZP_04657733.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|25296351|pir||AC0601 glutamine-binding periplasmic protein precursor [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|1649035|gb|AAB49427.1| high-affinity periplasmic glutamine binding protein [Salmonella enterica subsp. enterica serovar Typhimurium] gi|16419336|gb|AAL19766.1| glutamine high-affinity transporter [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16502041|emb|CAD05277.1| glutamine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Typhi] gi|29138110|gb|AAO69681.1| glutamine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|161364282|gb|ABX68050.1| hypothetical protein SPAB_02672 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194401086|gb|ACF61308.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194408797|gb|ACF69016.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194456426|gb|EDX45265.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194713712|gb|ACF92933.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195630984|gb|EDX49570.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197212282|gb|ACH49679.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197242685|gb|EDY25305.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197290080|gb|EDY29437.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|199603432|gb|EDZ01978.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204320918|gb|EDZ06119.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205324505|gb|EDZ12344.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205329625|gb|EDZ16389.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205334678|gb|EDZ21442.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205340418|gb|EDZ27182.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205343029|gb|EDZ29793.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|206708069|emb|CAR32360.1| glutamine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|267992576|gb|ACY87461.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157414|emb|CBW16903.1| glutamine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312911853|dbj|BAJ35827.1| glutamine ABC transporter substrate binding protein [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320085103|emb|CBY94890.1| Membrane-bound lytic murein transglycosylase F Murein lyase F; Flags: Precursor [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321226403|gb|EFX51454.1| Glutamine ABC transporter, periplasmic glutamine-binding protein [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322616305|gb|EFY13214.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322619555|gb|EFY16430.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622749|gb|EFY19594.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628661|gb|EFY25448.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631598|gb|EFY28354.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322637125|gb|EFY33828.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641675|gb|EFY38311.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644530|gb|EFY41070.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322648464|gb|EFY44916.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322654199|gb|EFY50522.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658114|gb|EFY54381.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322663588|gb|EFY59790.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322670324|gb|EFY66464.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322671560|gb|EFY67682.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676916|gb|EFY72983.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682841|gb|EFY78860.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686520|gb|EFY82502.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323129136|gb|ADX16566.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323194583|gb|EFZ79776.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323199086|gb|EFZ84182.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202041|gb|EFZ87100.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208933|gb|EFZ93870.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323213918|gb|EFZ98688.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323215230|gb|EFZ99975.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323220850|gb|EGA05288.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323227290|gb|EGA11458.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229908|gb|EGA14031.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233133|gb|EGA17229.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240868|gb|EGA24910.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323243185|gb|EGA27205.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248724|gb|EGA32652.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251728|gb|EGA35595.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323257540|gb|EGA41228.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323261457|gb|EGA45038.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323267888|gb|EGA51367.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323272045|gb|EGA55460.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 248 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 53/267 (19%), Positives = 88/267 (32%), Gaps = 23/267 (8%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K L + L F S A L +T V F + + + GFDV Sbjct: 1 MKSLLKVSLAALTLAFAVSSHAADK--------KLVVATDTAFVPFEFKQGD-KYVGFDV 51 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D A++ + D P++ ALQ+K ID+ T R+ ++ + Sbjct: 52 DLWDAIAKELKLD---YTLKPMDFSGIIPALQTKNIDLALAGITITDERKKAIDFSDG-- 106 Query: 122 TYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G ++ I SV L G + V++GT + DY KA+ F ++ Sbjct: 107 YYKSGLLVMVKANNNDIKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNID 162 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +R DA D + T + + + + A +G E Sbjct: 163 NAYMELGTNRADAVLHDTPNILYFIKTAGN-GQFKAVGESLEAQQYGVAFPKGSDELREK 221 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKD 267 V+ T E G + + Sbjct: 222 VNGALK---TLRENGTYNEIYKKWFGT 245 >gi|315166947|gb|EFU10964.1| ABC transporter, permease protein [Enterococcus faecalis TX1341] Length = 722 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 51/275 (18%), Positives = 92/275 (33%), Gaps = 16/275 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + F+ ++++ +F + S + KK G + F + G + G D Sbjct: 1 MKRKHFLLSFFVMMVTLLTFISGTSAHAEGKK---YTIGTDLTFAPFEFQDSKGKYIGID 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A++ ++ PL A+QSKQID + T R+ S F Sbjct: 58 VDLLDAIAKD---QDFEVDLKPLGFDSAVQAIQSKQIDGMIAGMSITDERKKS--FDFSD 112 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G + K I S L G ++ + GT + L Y F+ Sbjct: 113 PYFDSGLQLAVKKGNDKIKSYDDLKGKTVAAKVGTESANFLEKN--KEKYDYTIKNFDDA 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + A DA D L + ++ D + S A+ +G Sbjct: 171 TGLYKALENGEADAIVDDYPVLGYAV---KNGQKLQLVGDKETGSSYGFAVKKGQNP--E 225 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 ++ + + ++ G K +N + Q Sbjct: 226 LIKKFNAGLKNLKDNGTYDKILNNYLATGDETNTQ 260 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 42/260 (16%), Positives = 87/260 (33%), Gaps = 17/260 (6%) Query: 18 TSFSTNASILGDIK-KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 T+ + I K+ ++ F A D+ G DVD + ++ + Sbjct: 257 TNTQDAGEQMKKITPKKEKYVIASDSTFAPFEFQNAQSDYVGIDVDLVKR-AAELQGFTV 315 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KK 135 + +++ ++ A++S Q D + T R+ + F + G + K Sbjct: 316 EFKFIGFSSA--VQAVESGQADGMVAGMTITDDRKKA--FDFSVPYFDSGIQIAVKKGND 371 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I S L G + V+ GT + L Y + + + +A DA Sbjct: 372 KIKSYDDLKGKKVGVKIGTESADFLEKN--KKKYDYSIKYLDTTDALYSALEIGEVDAM- 428 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEEL 254 D + + ++P I + A+ + + E + + M E Sbjct: 429 MDDYPVIGYGVAQNQPLATPIPREKGGS--YGFAVKKGQNPELLEMFNEGLKEMKRTGEY 486 Query: 255 ----GITQKNINQVSKDTTN 270 G K+ N+ ++T + Sbjct: 487 DKIIGTYVKDGNEAKEETAD 506 >gi|170769131|ref|ZP_02903584.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia albertii TW07627] gi|170122203|gb|EDS91134.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia albertii TW07627] Length = 248 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 51/267 (19%), Positives = 89/267 (33%), Gaps = 23/267 (8%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K L + L F S A L +T V F + + + GFDV Sbjct: 1 MKSVLKVSLAALTLAFAVSSHAADK--------KLVVATDTAFVPFEFKQGD-KYVGFDV 51 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D A++ + D + P++ ALQ+K +D+ T R+ ++ + Sbjct: 52 DLWAAIAKELKLD---YELKPMDFSGIIPALQTKNVDLALAGITITDERKKAIDFSDG-- 106 Query: 122 TYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G ++ + SV L G + V++GT + DY KA+ F ++ Sbjct: 107 YYKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNID 162 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +R DA D + T + + D + A +G + Sbjct: 163 NAYMELGTNRADAVLHDTPNILYFIKTAGN-GQFKAVGDSLEAQQYGIAFPKGSDALRDK 221 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKD 267 V+ T E G + + Sbjct: 222 VNGALK---TLRENGTYNEIYKKWFGT 245 >gi|56421988|ref|YP_149306.1| amino acid ABC transporter substrate-binding protein [Geobacillus kaustophilus HTA426] gi|56381830|dbj|BAD77738.1| amino acid ABC transporter (substrate-binding protein) [Geobacillus kaustophilus HTA426] Length = 273 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 51/275 (18%), Positives = 86/275 (31%), Gaps = 18/275 (6%) Query: 1 MYKDFFVSILCLIILFFTSF--STNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDW 56 M K V+++ + + + ST S +K G + G + F ++ G Sbjct: 4 MKKGLIVAVVAALFMALAACGKSTETSSPSGAEKEGKQKITVGTDAAFAPFEYMQ-KGKI 62 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFD D A+ D + + F +LQSK+ID+ T R+ S Sbjct: 63 VGFDADLLDAVMKEAGLD---YELKNIGWDPLFASLQSKEIDMGISGITITDERKQSYDF 119 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + Q ++ + + + L G +I VQ TT + F H F Sbjct: 120 --SAPYFEATQVILVKQGSPVKNALDLKGKTIGVQNATTGQEAAEKLF---GKGDHIKKF 174 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL-PDIISKSPLAPAIIQGDT 235 E DA D + N VI P + + D+ Sbjct: 175 ETSVVAIMELLNGGVDAVITDNAVANEYVKNNPDKKLQVIEDPQNFASEYYGMIFPK-DS 233 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 E V ++ + G + + N Sbjct: 234 ELKAKVDEALQKVIDS---GKYAEIYKKWFGKEPN 265 >gi|159905111|ref|YP_001548773.1| extracellular solute-binding protein [Methanococcus maripaludis C6] gi|159886604|gb|ABX01541.1| extracellular solute-binding protein family 3 [Methanococcus maripaludis C6] Length = 260 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 51/271 (18%), Positives = 97/271 (35%), Gaps = 24/271 (8%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKR-----GFLKCGINTGLVGFAEVKANGDW 56 K + ++ ++ F AS K G L G + F E A+G+ Sbjct: 5 KKLILLGLVVSLVAFSGCTEDQASA----KSSMTMTEGILVVGTDPTFPPFEEKNADGEL 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFD+D +AL + +IQ++ AL++++ D + T R + Sbjct: 61 VGFDIDLMKALGEKMG---IEIQFVEQPFDGIIPALKAEKFDCIISAVTITDDRAKEVAF 117 Query: 117 AFRPITYFDGQGFIM--HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 YFD I + SV L+G + Q GTT E Y A + + Sbjct: 118 TNS---YFDAAQVIAVLVDDDSVQSVDDLAGKVVAAQLGTTGEYEAQHY--AEELGFEIK 172 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +E + + R +A D A + + +P + ++ + ++ A + Sbjct: 173 SYEVMADAFIDMENGRVNAVVTDDGV--AQRFLDTKPGVYKVVGEPMTAESYGLAANLDN 230 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 E + ++ A+ +E G + + Sbjct: 231 QELIDAIN---AALAEVKEDGTYDEIYAEWF 258 >gi|313680186|ref|YP_004057925.1| amino acid ABC transporter substrate-binding protein, paat family [Oceanithermus profundus DSM 14977] gi|313152901|gb|ADR36752.1| amino acid ABC transporter substrate-binding protein, PAAT family [Oceanithermus profundus DSM 14977] Length = 254 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 41/236 (17%), Positives = 88/236 (37%), Gaps = 17/236 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + +++ L L +L + +IK+ G + G F + KGFD Sbjct: 1 MKRILWLASLVL-VLGSLGMAQKFRTFPEIKQSGKILIGTEGAFPPFNFFDDQNNLKGFD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A++ + P ++ +AL + D + + T R ++ Sbjct: 60 IDIGNAIAGQLGLGP---EWKAHAWDTMLIALNQGRFDFVIASHTITEERAKAVDFTK-- 114 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+ I+ K G + +L G I Q GTT E + ++ Sbjct: 115 -PYYCTGNVIVSKPGGPQTPEELKGKVIGAQLGTTFEEFAKQFGPKQ-----LKTYQTNP 168 Query: 181 EIDAAYRAHRCDAYTGDI-SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + R DA+ D +A+ A++ + + + ++++ + A+ +G++ Sbjct: 169 DAVQDLMLGRIDAWITDQFTAIEAIQSRDLN----LQISGLLNREEIGMAVAKGNS 220 >gi|29375354|ref|NP_814508.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecalis V583] gi|227554876|ref|ZP_03984923.1| amino acid ABC superfamily ATP binding cassette transporter protein [Enterococcus faecalis HH22] gi|256761528|ref|ZP_05502108.1| amino acid ABC transporter [Enterococcus faecalis T3] gi|257081023|ref|ZP_05575384.1| ABC-type amino acid transport/signal transduction protein system [Enterococcus faecalis E1Sol] gi|257083683|ref|ZP_05578044.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis Fly1] gi|257418368|ref|ZP_05595362.1| ABC amino acid transporter [Enterococcus faecalis T11] gi|29342814|gb|AAO80578.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecalis V583] gi|227175989|gb|EEI56961.1| amino acid ABC superfamily ATP binding cassette transporter protein [Enterococcus faecalis HH22] gi|256682779|gb|EEU22474.1| amino acid ABC transporter [Enterococcus faecalis T3] gi|256989053|gb|EEU76355.1| ABC-type amino acid transport/signal transduction protein system [Enterococcus faecalis E1Sol] gi|256991713|gb|EEU79015.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis Fly1] gi|257160196|gb|EEU90156.1| ABC amino acid transporter [Enterococcus faecalis T11] gi|315573457|gb|EFU85648.1| ABC transporter, permease protein [Enterococcus faecalis TX0309B] gi|315581418|gb|EFU93609.1| ABC transporter, permease protein [Enterococcus faecalis TX0309A] Length = 722 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 51/275 (18%), Positives = 92/275 (33%), Gaps = 16/275 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + F+ ++++ +F + S + KK G + F + G + G D Sbjct: 1 MKRKHFLLSFFVMMVTLLTFISGTSAHAEGKK---YTIGTDLTFAPFEFQDSKGKYIGID 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A++ ++ PL A+QSKQID + T R+ S F Sbjct: 58 VDLLDAIAKD---QDFEVDLKPLGFDSAVQAIQSKQIDGMIAGMSITDERKKS--FDFSD 112 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G + K I S L G ++ + GT + L Y F+ Sbjct: 113 PYFDSGLQLAVKKGNDKIKSYDDLKGKTVAAKVGTESANFLEKN--KEKYDYTIKNFDDA 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + A DA D L + ++ D + S A+ +G Sbjct: 171 TGLYKALENGEADAIVDDYPVLGYAV---KNGQKLQLVGDKETGSSYGFAVKKGQNP--E 225 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 ++ + + ++ G K +N + Q Sbjct: 226 LIKKFNAGLKNLKDNGTYDKILNNYLATGDETNTQ 260 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 43/260 (16%), Positives = 88/260 (33%), Gaps = 17/260 (6%) Query: 18 TSFSTNASILGDIK-KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 T+ + I K+ ++ F A GD+ G DVD + ++ + Sbjct: 257 TNTQDAGEQMKKITPKKEKYVIASDSTFAPFEFQNAQGDYVGIDVDLVKR-AAELQGFTV 315 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KK 135 + +++ ++ A++S Q D + T R+ + F + G + K Sbjct: 316 EFKFIGFSSA--VQAVESGQADGMVAGMTITDDRKKA--FDFSVPYFDSGIQIAVKKGND 371 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I S L G + V+ GT + L Y + + + +A DA Sbjct: 372 KIKSYDDLKGKKVGVKIGTESADFLEKN--KKKYDYSIKYLDTTDALYSALEIGEVDAM- 428 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEEL 254 D + + ++P I + A+ + + E + + M E Sbjct: 429 MDDYPVIGYGVAQNQPLATPIPREKGGS--YGFAVKKGQNPELLEMFNEGLKEMKRTGEY 486 Query: 255 ----GITQKNINQVSKDTTN 270 G K+ N+ ++T + Sbjct: 487 DKIIGTYVKDGNEAKEETAD 506 >gi|313632221|gb|EFR99286.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria seeligeri FSL N1-067] Length = 256 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 47/266 (17%), Positives = 99/266 (37%), Gaps = 24/266 (9%) Query: 1 MYKDFF---VSILCLIILFFTSFST------NASILGDIKKRGFLKCGINTGLVGFAE-- 49 M K+F +I + I F+ F+T L I+++G L G++ + Sbjct: 1 MQKNFLQKLAAIALIFIFVFSGFTTVFAADNQDETLKKIQEKGVLTVGLSADYPPYEFHQ 60 Query: 50 -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + GFDV ++ + K+ +N +L++ +ID++ T Sbjct: 61 TIDGKDKIVGFDVSIAEKIAKDL---DVKLDIKEMNFDSLLGSLKTGKIDMIISGMSPTP 117 Query: 109 LREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 R+ + F Q ++ K K+ +SV+ +G + Q TT E + + Sbjct: 118 ERQKEVDF--SDPYMFVQQRVVVRKADKEKFTSVNDFNGVKVGAQKQTTQE----ELAQN 171 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + ++V ++ +++ DA + A + + I + SK Sbjct: 172 ELVGSDVVSLQKVPDLLLNLSSNKVDAVVLEGPVAEAYLSQDKTLAMADIKFENGSKET- 230 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAE 252 A A+ +G T V+ + + Sbjct: 231 AIALPKGSTALQEKVNASIKEIQDTG 256 >gi|330891102|gb|EGH23763.1| putative ABC transporter exported solute-binding protein [Pseudomonas syringae pv. mori str. 301020] gi|330985962|gb|EGH84065.1| putative ABC transporter exported solute-binding protein [Pseudomonas syringae pv. lachrymans str. M301315] Length = 279 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 46/244 (18%), Positives = 91/244 (37%), Gaps = 12/244 (4%) Query: 11 CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSS 69 L ++ + + L I +R + G+ F + A GD +G++V+ + L+ Sbjct: 12 ALGLILCAGLAQADATLERINERHKVSVGVLLSGPPFGTIDPATGDHQGYNVELSKELAK 71 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD-GQG 128 + D ++ + + A R LQ ++D+L N +T R + L + P Y + G Sbjct: 72 RLSVD---LETVSVLAPNRVQFLQQGKVDLLIANMQFTEER--AQILDYVPTPYEEVGGA 126 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 ++ K GIS L G +CV G+ L + + A F E + R Sbjct: 127 ALVRKGSGISMWEDLKGKPVCVSQGSNFIKPLQELYGAQ-----IKAFRSQSESLLSLRG 181 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 + C A + L + + +P + S + +G+ + + Sbjct: 182 NGCVAAVHVSPTMRTLLSEKEWSGYEIPVPTDLIPSSSVIWVRKGEHDIQARLDAIVRDW 241 Query: 249 VTAE 252 + Sbjct: 242 HRSG 245 >gi|300870610|ref|YP_003785481.1| polar amino acid uptake ABC transporter amino acid-binding protein [Brachyspira pilosicoli 95/1000] gi|283462655|gb|ADB22528.1| oligopeptide-binding protein 6 [Brachyspira pilosicoli] gi|300688309|gb|ADK30980.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Brachyspira pilosicoli 95/1000] Length = 271 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 40/255 (15%), Positives = 86/255 (33%), Gaps = 14/255 (5%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 + S + L +K+ G L G++ G+ GFD+D + +++ + + Sbjct: 23 ASQASSAADNSLQKVKESGKLVLGLDDTFAPMGFRDEEGNIVGFDIDLAKEVANRLGVEL 82 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH--K 133 P++ L+L+ +D++ R+ + Y + + I+ Sbjct: 83 VA---KPVDWSSVVLSLKKGDVDVVWNGFAINETRKEQVNFTK---PYLNNRLMIVKNAD 136 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 + I + L G + VQ G++ +L + ++ A R DA Sbjct: 137 RDDIKTKDDLKGKILGVQTGSSNYESL-EADPISKETKEIRQYDIYANAFLDLEAKRIDA 195 Query: 194 YTGDISALYALKLTNDRPSEHVILPDI-ISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 D + A + ++ +L + I+ + + DTE N + M Sbjct: 196 VIVD--EIVARYYISKENADFELLEEYPITAKSFGVGVRKTDTELLNAIDKALDDMRDDG 253 Query: 253 ELGITQKNINQVSKD 267 + KD Sbjct: 254 KAAEIST--KWFGKD 266 >gi|329120282|ref|ZP_08248950.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Neisseria bacilliformis ATCC BAA-1200] gi|327462623|gb|EGF08946.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Neisseria bacilliformis ATCC BAA-1200] Length = 268 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 45/226 (19%), Positives = 80/226 (35%), Gaps = 8/226 (3%) Query: 37 KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96 + N F + N + +GFDVD A++ A ++++ F AL + Sbjct: 45 RVAANAEFAPFEFMDTNNNVQGFDVDLINAMAKA---GGFRVEFKHQPWDSLFAALGNGD 101 Query: 97 IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTT 155 +DIL+ T R+ S+ Y Q ++ + K I S L A + V GTT Sbjct: 102 VDILASAVTITDERKQSMDF--SDPYYKITQVILVPQGKDIKSAEDLKKANKVGVVTGTT 159 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215 +L + A N K FE + + DA D + + N + Sbjct: 160 GDLAVGKLLGADNGKI--ARFENITLVTKELENGGLDAVVSDSAVVANYVKNNGNKGFTM 217 Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 + + + +GDTE ++ + + E + Sbjct: 218 VTVPDFPEENYGFVVRKGDTETQAALNAALKKVRESGEYDKIAEKY 263 >gi|167745443|ref|ZP_02417570.1| hypothetical protein ANACAC_00134 [Anaerostipes caccae DSM 14662] gi|167655164|gb|EDR99293.1| hypothetical protein ANACAC_00134 [Anaerostipes caccae DSM 14662] Length = 269 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 50/278 (17%), Positives = 87/278 (31%), Gaps = 21/278 (7%) Query: 1 MY-KDFFV----SILCLIILFFTSFSTNASILGD----IKKRGFLKCGINTGLVGFAEVK 51 M K V ++L +L S + +K L G++ Sbjct: 1 MRVKKLLVLCVSAVLAGSMLLAGCSKKEESKTDESLQYVKDNKELILGLDASFPPMGFTD 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 + GFD+D + ++ + K++ P+N + LQ K ID + ++ R Sbjct: 61 KDQKIVGFDIDMAKEVTKRMG---IKLKLQPINWDSKDQELQGKTIDCIWNGLTYSEDRA 117 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 + + + Q ++ +K I S+ + + VQ G+T + Sbjct: 118 KEMLCSES--YMDNHQVLLVPEKSKIKSLKDIKKQQVGVQKGSTAADAVDQ--TKELKNA 173 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + F EI CDA D + A P + IL D + Sbjct: 174 KIVYFGNNVEILNDLGNG-CDAAVMD--EVVAKYYAKKDPGKFKILNDNLITEKYVIGFR 230 Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 GD + V M L K +D T Sbjct: 231 TGDEKLKAEVEKQLKDMKKDGTLAKISK--KWFGEDLT 266 >gi|322378094|ref|ZP_08052580.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Streptococcus sp. M334] gi|321280931|gb|EFX57945.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Streptococcus sp. M334] Length = 302 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 46/274 (16%), Positives = 90/274 (32%), Gaps = 18/274 (6%) Query: 1 MYKDFFVSI-LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56 M K L ++ L F + ++ + IK +G L +N F V Sbjct: 38 MKKVLMTMFGLVMLPLLFACSNNQSAGIEAIKSKGKLVVALNPDFAPFEYQKVVDGKNQI 97 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G D++ +A+++ + + ++ P++ ++QS + D+ T R S Sbjct: 98 VGSDIELAKAIATELGVE---LELSPMSFDNVLASVQSGKADLAISGVSKTDER--SKVF 152 Query: 117 AFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F Y I+ K SV+ L+ + Q G+ E D + Sbjct: 153 DFSTPYYTSKNKLIVKKSDLATYQSVNDLAQKKVGAQKGSIQETMAKDLL----QNSSLV 208 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + ++ + DA + N + + + A A+ + Sbjct: 209 SLPKNGNLITDLKSGQVDAVIFEEPVAKGFVENNPDLAIADLNFEKEQDDSYAVAMKKDS 268 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 E V T + + EL K I K + Sbjct: 269 KELKEAVDKTIQKLKESGELD---KLIEDAFKAS 299 >gi|220932713|ref|YP_002509621.1| extracellular solute-binding protein family 3 [Halothermothrix orenii H 168] gi|219994023|gb|ACL70626.1| extracellular solute-binding protein family 3 [Halothermothrix orenii H 168] Length = 244 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 47/268 (17%), Positives = 97/268 (36%), Gaps = 26/268 (9%) Query: 1 MYK-DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + L L++L S G + F V +G++ GF Sbjct: 1 MKKLSIILVTLLLVMLAGIGVSAE-----------KYVVGTSADFPPFEYV-EDGEFVGF 48 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D RA++ + +++ ++ AL+S IDI T RE + + Sbjct: 49 DMDLIRAIAE---VEGFEVEIRDMSFDSLIAALKSGNIDIAIAGMTITEKREKVVDFSI- 104 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFER 178 Y Q I+ + ++ ++ VQ TT +L + D + + + ++ Sbjct: 105 -PYYTANQSVIVKEDSDLNLTVLYGDNNVGVQTSTTGDLWVTDNLEKKGILTGKVVRYDT 163 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 DA D A + + P + V + II+ + +G+ Sbjct: 164 FVLAVTDLVNGNLDAIVLDSPV--AERFVDSHPLKEVGI--IITGEEYGIVVNEGN---K 216 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSK 266 ++++ + + +E G+ K + + K Sbjct: 217 DLLNKINNGIKKLQESGVISKLVGKYFK 244 >gi|237730789|ref|ZP_04561270.1| glutamine ABC transporter periplasmic protein [Citrobacter sp. 30_2] gi|226906328|gb|EEH92246.1| glutamine ABC transporter periplasmic protein [Citrobacter sp. 30_2] Length = 248 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 51/267 (19%), Positives = 90/267 (33%), Gaps = 23/267 (8%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K L + L F S A L +T V F + + + GFDV Sbjct: 1 MKSVLKVSLAALTLAFAVSSHAADK--------KLVVATDTAFVPFEFKQGD-KYVGFDV 51 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D A++ + D + P++ ALQ+K ID+ T R+ ++ + Sbjct: 52 DLWAAVAKELKLD---YELKPMDFSGIIPALQTKNIDLALAGITITDERKKAIDFSDG-- 106 Query: 122 TYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G ++ + SV L G + V++GT + DY KA+ F ++ Sbjct: 107 YYKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNID 162 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +R DA D + T + + + + A +G + Sbjct: 163 NAYMELGTNRADAVLHDTPNILYFIKTAGN-GQFKAVGESLEAQQYGIAFPKGSDDLREK 221 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKD 267 V+ T +E G + + Sbjct: 222 VNGALK---TLKENGTYNEIYKKWFGT 245 >gi|325263518|ref|ZP_08130252.1| putative CjaA protein [Clostridium sp. D5] gi|324031227|gb|EGB92508.1| putative CjaA protein [Clostridium sp. D5] Length = 288 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 43/233 (18%), Positives = 87/233 (37%), Gaps = 18/233 (7%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L I ++G + G + +G G+DVD+ L + + ++ + ++A Sbjct: 51 TLDSILEKGKIVVGCSLNGAPIGFTDDSGKEMGYDVDWANRLGEVLGVE---VEIVNVDA 107 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS- 144 + R AL S ++D+L N L R S+ + G + + ++ L+ Sbjct: 108 ETRLPALTSGRVDVLFANVTGNLERAQSVDFSI--PYLRAGIKMLTAAGSDLHTLEDLNS 165 Query: 145 -GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 ++ V G+T E + + N+ Y + + + DA D + + Sbjct: 166 PDVTVSVNRGSTGEALVTESAPDANILY----VDNFTDSVLQVEQGKADAAFEDNTVVEY 221 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN----IVSWTHYAMVTAE 252 ND+ + + P+ A +GD E+ VSW + +E Sbjct: 222 AASQNDK---LEAQEKMYTSDPICAACRKGDIEFARYLDMFVSWQISSGWQSE 271 >gi|146318671|ref|YP_001198383.1| amino acid ABC transporter periplasmic protein [Streptococcus suis 05ZYH33] gi|146320878|ref|YP_001200589.1| amino acid ABC transporter periplasmic protein [Streptococcus suis 98HAH33] gi|253751787|ref|YP_003024928.1| putative extracellular amino acid-binding protein [Streptococcus suis SC84] gi|253753610|ref|YP_003026751.1| extracellular amino acid-binding protein [Streptococcus suis P1/7] gi|253755509|ref|YP_003028649.1| extracellular amino acid-binding protein [Streptococcus suis BM407] gi|145689477|gb|ABP89983.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus suis 05ZYH33] gi|145691684|gb|ABP92189.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus suis 98HAH33] gi|251816076|emb|CAZ51696.1| putative extracellular amino acid-binding protein [Streptococcus suis SC84] gi|251817973|emb|CAZ55754.1| putative extracellular amino acid-binding protein [Streptococcus suis BM407] gi|251819856|emb|CAR45858.1| putative extracellular amino acid-binding protein [Streptococcus suis P1/7] gi|292558355|gb|ADE31356.1| extracellular solute-binding protein, family 3 [Streptococcus suis GZ1] gi|319758136|gb|ADV70078.1| amino acid ABC transporter periplasmic protein [Streptococcus suis JS14] Length = 266 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 91/259 (35%), Gaps = 12/259 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI--LGDIKKRGFLKCGINTGLVGFAE---VKANGD 55 M K ++ L L + S+ +S L IK++G L + F V + Sbjct: 1 MKKILALAATVLAGLTLAACSSTSSQSALDKIKEKGTLVVATSPDYAPFEFQALVDGKNE 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G D+ + ++ + K++ ++ ++Q+ + DI ++ R Sbjct: 61 VVGADIMLAQKIADELG---VKLEVSAMSFDNVLSSVQNGKADIAIAGLSYSEERAKVFD 117 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + D ++S+ +SG ++ VQ G+T E + N+ ++ Sbjct: 118 FSESYYQISDVLLIKKDSANSLTSIDAMSGKTLAVQKGSTQESYAQENISQANLISLTLM 177 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 E V E ++ + DA D N + + I ++ A+ +G T Sbjct: 178 GEAVNE----LKSGKVDAILMDSPVAAGYVSQNSDLAVASVEFPTIDENSKVIALPKGST 233 Query: 236 EWYNIVSWTHYAMVTAEEL 254 E + + + E Sbjct: 234 ELKTAIDKVIAEVKASGEF 252 >gi|134103708|ref|YP_001109369.1| putative ABC transporter substrate-binding protein [Saccharopolyspora erythraea NRRL 2338] gi|291004757|ref|ZP_06562730.1| putative ABC transporter substrate-binding protein [Saccharopolyspora erythraea NRRL 2338] gi|133916331|emb|CAM06444.1| putative ABC transporter substrate-binding protein [Saccharopolyspora erythraea NRRL 2338] Length = 259 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 51/231 (22%), Positives = 80/231 (34%), Gaps = 10/231 (4%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 + G L + F G GFDVD ++ + KI P + Sbjct: 33 ESGHLTTCTHMDYKPFQFHD-QGKIVGFDVDLVDLIARDLGVQ-QKIVDTPFEGIQSGED 90 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151 L +++ D+ + T +RE F + Q + K G++S+ L G + VQ Sbjct: 91 LNTRRCDVAAAAMSITDVREQ--NFDFSDPYFEATQALLTKKGTGLNSLEALRGKKLGVQ 148 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 TT E + AH Y + FE + A + + DA D S L N Sbjct: 149 LSTTGETYANENKAAHG--YEVVQFEDLPLSVTAVQTGQIDAAINDNSVLGDFIKNNP-- 204 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNI 261 E I + + + G+ N V+ + M E I QK Sbjct: 205 -EVEITTEFTTGDQYGIGVATGNEALRNAVNQSLKKMKENGEYDAIYQKWF 254 >gi|205357022|ref|ZP_02344159.2| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205324568|gb|EDZ12407.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 245 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 51/267 (19%), Positives = 95/267 (35%), Gaps = 28/267 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ T ++ F + AN GFD Sbjct: 3 MKKVLIAALIAGFSLSATAAQT-------------IRFATEASYPPFESMDANNKIVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL I + + +L+ ++ D + D T RE + Sbjct: 50 VDLANALCKEIDASCT---FTNQAFDSLIPSLKFRRFDAVMAGMDITPEREKQVLFT--- 103 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+D + ++ +SV QL G ++ VQ GTT + + D + + + ++ + Sbjct: 104 TPYYDNSALFVGQQGKYTSVDQLKGKNVGVQNGTTHQKFIMD----KHPEITTVPYDSYQ 159 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R DA GD + + N + P + + L A+ QG+TE Sbjct: 160 NAKLDLQNGRIDAVFGDTAVVTEWLKANPKLAPVGDKVTDKDYFGTGLGIAVRQGNTELQ 219 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVS 265 + A+ ++ G + N+ Sbjct: 220 QKFN---TALEKVKKDGTYETIYNKWF 243 >gi|315173030|gb|EFU17047.1| ABC transporter, permease protein [Enterococcus faecalis TX1346] Length = 722 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 52/275 (18%), Positives = 94/275 (34%), Gaps = 16/275 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + F+ ++++ +F + S + KK G + F + G + G D Sbjct: 1 MKRKHFLLSFFVMMVTLLTFISGTSAHAEGKK---YTIGTDLTFAPFEFQDSKGKYIGID 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A++ ++ PL A+QSKQID + T R+ S F Sbjct: 58 VDLLDAIAKD---QDFEVDLKPLGFDSAVQAIQSKQIDGMIAGMSITDERKKS--FDFSD 112 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + + K I S L G ++ + GT + L Y F+ Sbjct: 113 PYFDSSLQLAVKKGNDKIKSYDDLKGKTVAAKVGTESANFLEKN--KEKYDYTIKNFDDA 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + A DA D L + ND + ++ D + S A+ +G Sbjct: 171 TGLYKALENGEADAIVDDYPVL-GYAVKND--QKLQLVGDKETGSSYGFAVKKGQNP--E 225 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 ++ + + ++ G K +N + Q Sbjct: 226 LIKKFNAGLKNLKDNGTYDKILNNYLATGDETNTQ 260 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 43/260 (16%), Positives = 88/260 (33%), Gaps = 17/260 (6%) Query: 18 TSFSTNASILGDIK-KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 T+ + I K+ ++ F A GD+ G DVD + ++ + Sbjct: 257 TNTQDAGEQMKKITPKKEKYVIASDSTFAPFEFQNAQGDYVGIDVDLVKR-AAELQGFTV 315 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KK 135 + +++ ++ A++S Q D + T R+ + F + G + K Sbjct: 316 EFKFIGFSSA--VQAVESGQADGMVAGMTITDDRKKA--FDFSVPYFDSGIQIAVKKGND 371 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I S L G + V+ GT + L Y + + + +A DA Sbjct: 372 KIKSYDDLKGKKVGVKIGTESADFLEKN--KKKYDYSIKYLDTTDALYSALEIGEVDAM- 428 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEEL 254 D + + ++P I + A+ + + E + + M E Sbjct: 429 MDDYPVIGYGVAQNQPLATPIPREKGGS--YGFAVKKGQNPELLEMFNEGLKEMKRTGEY 486 Query: 255 ----GITQKNINQVSKDTTN 270 G K+ N+ ++T + Sbjct: 487 DKIIGTYVKDGNEAKEETAD 506 >gi|315222684|ref|ZP_07864573.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus anginosus F0211] gi|315188370|gb|EFU22096.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus anginosus F0211] Length = 277 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 40/276 (14%), Positives = 88/276 (31%), Gaps = 17/276 (6%) Query: 1 MY-KDFFVSI--LCLIILFFTSFSTNASILG---DIKKRGFLKCGINTGLVGFAEVKANG 54 M K + ++I L L +L + + + +++ + G + V + NG Sbjct: 1 MKIKRYVLAICGLILFLLLTACSNVSNPKVDNWSKYQQKKSITIGFDNTFVPMGFEQKNG 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + GFD+D A+ K+ + P++ + L + ID++ T R + Sbjct: 61 QYVGFDIDLANAVFKEYG---IKVNWQPIDWDMKETELTNGTIDLIWNGYSATDERRKKV 117 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKY 171 + Q + K I+ + + + Q G++ + K + Sbjct: 118 QFTI--PYMKNEQVLVTKKSSNIAKTADMKDKILGAQTGSSGYDEFEAHPELLKNLVKNH 175 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 ++ E + R D D ++ + P A Sbjct: 176 KAAQYQSFTEALIDLQNSRIDGLLIDRVYANYYLKEEGILQDYYVFPAGFDSESFAVGAR 235 Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 + D + V + A + G QK ++ + Sbjct: 236 KTDKQL---VENINQAFKKLYQTGQFQKIADKWFGE 268 >gi|317486431|ref|ZP_07945258.1| bacterial extracellular solute-binding protein, family 3 [Bilophila wadsworthia 3_1_6] gi|316922341|gb|EFV43600.1| bacterial extracellular solute-binding protein, family 3 [Bilophila wadsworthia 3_1_6] Length = 268 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 45/250 (18%), Positives = 91/250 (36%), Gaps = 15/250 (6%) Query: 1 MYKDFFVSILCLIILF---FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K F V +L ++ + S++ D+ KRG L+ G + V +A NG++ Sbjct: 1 MKKFFAVLMLAAALILPGLAQAKDAQTSMIDDVVKRGVLRVG-FSSFVPWAMQDKNGEFV 59 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GF++D + L+ + + +Q +P AL + + D++ + T R + Sbjct: 60 GFEIDVAKRLAKDLGVE---LQLVPTKWAGIIPALMAGKFDVIIGSMSVTPERNLKANFT 116 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ--AGTTTELTLADYFKAHNMKYHPIV 175 K KG+ + + V G+T + + Sbjct: 117 VPYDYATIEVMANKEKTKGMKFPEDFNKPEVVVALRTGSTPVPVAKKVLPNATFR----L 172 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F+ + R D + L A ++ + + D + P+ I +GD Sbjct: 173 FDDEAPAVQDVLSGRADVMFS-SAPLPAFEVLRNPDKLYQPSTDAFYRQPVGMVIRKGDP 231 Query: 236 EWYNIV-SWT 244 + N++ +W Sbjct: 232 DSLNVLDNWI 241 >gi|206579100|ref|YP_002239548.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Klebsiella pneumoniae 342] gi|288936393|ref|YP_003440452.1| cationic amino acid ABC transporter periplasmic binding protein [Klebsiella variicola At-22] gi|290510552|ref|ZP_06549922.1| glutamine ABC transporter periplasmic protein [Klebsiella sp. 1_1_55] gi|206568158|gb|ACI09934.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Klebsiella pneumoniae 342] gi|288891102|gb|ADC59420.1| cationic amino acid ABC transporter, periplasmic binding protein [Klebsiella variicola At-22] gi|289777268|gb|EFD85266.1| glutamine ABC transporter periplasmic protein [Klebsiella sp. 1_1_55] Length = 248 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 53/268 (19%), Positives = 90/268 (33%), Gaps = 24/268 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M F VS+ L + F S L +T V F + + + GFD Sbjct: 1 MKSVFKVSLAALTLAFAVSSHAANKTL---------VVATDTAFVPFEFKQGD-KYVGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A++ + D P++ ALQ+K ID+ T R+ ++ + Sbjct: 51 VDLWAAIAKELKLD---YTLKPMDFSGIIPALQTKNIDLALAGITITDERKKAIDFSDG- 106 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G +++ I V L+G + V++GT + DY KA+ F + Sbjct: 107 -YYKSGLLVMVNANNNDIKDVKDLNGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNI 161 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R DA D + T + + + + A +G E Sbjct: 162 DNAYMELGTGRADAVLHDTPNILYFIKTAGN-GKFKAVGESLEAQNYGIAFPKGSDELRE 220 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKD 267 V+ T E G + + Sbjct: 221 KVNGALK---TLRENGTYNEIYKKWFGT 245 >gi|150019590|ref|YP_001311844.1| extracellular solute-binding protein [Clostridium beijerinckii NCIMB 8052] gi|149906055|gb|ABR36888.1| extracellular solute-binding protein, family 3 [Clostridium beijerinckii NCIMB 8052] Length = 278 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 52/236 (22%), Positives = 96/236 (40%), Gaps = 20/236 (8%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVDFCRALSSAIFDDP 75 + S+NAS L IK +G L G + + V GFD+D + ++ + + Sbjct: 35 NTSSNASALQAIKSKGKLVIGTSADYPPYEFHKEVDGKDKIVGFDIDIAQEIAKDLGVE- 93 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH--K 133 ++ + +ALQS +ID++ T R+ + I Y F++ Sbjct: 94 --LEVKDMAFDGLLVALQSDKIDMVFAGMTPTDERKQNADF--SDIYYTATHRFVLRSGD 149 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 + GI+ + L I VQ G+ E D F A N+K ++V ++ + ++ DA Sbjct: 150 EAGITKMEDLKNKKIGVQKGSIQEGIAKDNFDAANIK----SLDKVTDLILDLKNNKVDA 205 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSP---LAPAIIQGDTEWYNIVSWTHY 246 + ++ D+ I + K P A A+ +G T+ + V+ T Sbjct: 206 VLAEQPV---AQINVDKNEGIAIADKLEVKDPDGGSAIAMKKGSTDLTDQVNKTIK 258 >gi|296139504|ref|YP_003646747.1| extracellular solute-binding protein family 3 [Tsukamurella paurometabola DSM 20162] gi|296027638|gb|ADG78408.1| extracellular solute-binding protein family 3 [Tsukamurella paurometabola DSM 20162] Length = 323 Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 47/299 (15%), Positives = 92/299 (30%), Gaps = 43/299 (14%) Query: 6 FVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 V+++ I S L I + G + G G + GFD Sbjct: 9 LVAVVIAAIAMVGGLVACGSTGPRDLLKSI-ESGSVILGTKYDQPGLGLRNPDKSMSGFD 67 Query: 61 VDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 VD ++++ A K ++ + +R + + ++D+++ R + Sbjct: 68 VDVSSYVVKSIAQANGWKEPKTRWRETPSAQRETLINNGEVDMIAATYSINANRSKKVDF 127 Query: 117 AFRPITYFDGQGFIMHKKK-GISSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYHPI 174 A QG ++ K I+ ++ L+ G +C AG+T+ + KA Sbjct: 128 A--GPYLVVRQGLLVRKDDTSITQLTDLNQGKKLCSAAGSTSAQNV----KAQLPGVQLQ 181 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP---------------- 218 F+ A DA T D S L E ++ Sbjct: 182 EFDSYSTCTEALHQKSIDALTTDESILAGF--NQQYGGEFRVVDMTYIADQCIKGSQKKA 239 Query: 219 -DIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRF 276 S + +G + ++ AM+ + K+ + + QR Sbjct: 240 GSPFSTERYGIGLAKGQKKTQEAINAAVSAMIADGS------WEKALRKNLGDEETQRL 292 >gi|145295856|ref|YP_001138677.1| hypothetical protein cgR_1781 [Corynebacterium glutamicum R] gi|140845776|dbj|BAF54775.1| hypothetical protein [Corynebacterium glutamicum R] Length = 295 Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 42/270 (15%), Positives = 86/270 (31%), Gaps = 29/270 (10%) Query: 3 KDFFV---SILCLIILFFTSFSTNASI------LGDIKKRGFLKCGINTGLVGFAEVKAN 53 K F +IL L + + L I + G + G G + Sbjct: 4 KRTFTRIGAILGATALAGVTLTACGDSSGGDGFLAAI-ENGSVNVGTKYDQPGLGLRNPD 62 Query: 54 GDWKGFDVDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 G DVD + ++I DD I++ + +R +Q+ ++DI++ Sbjct: 63 NSMSGLDVDVAEYVVNSIADDKGWDHPTIEWRESPSAQRETLIQNGEVDIIAATYSINAG 122 Query: 110 REISLGLAFRPITYFDGQGFIMH-KKKGISSVSQL-SGASICVQAGTTTELTLADYFKAH 167 R S + F Q ++ I ++ L +G +C +G+T + D Sbjct: 123 R--SESVNFGGPYLLTHQALLVRQDDDRIETLEDLDNGLILCSVSGSTPAQKVKDVLP-- 178 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL-----PDIIS 222 ++ A DA T D + L+ + + ++ + + Sbjct: 179 --GVQLQEYDTYSSCVEALSQGNVDALTTDATILFGYSQQYE--GDFRVVEMEKDGEPFT 234 Query: 223 KSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 + + D E + ++ M Sbjct: 235 DEYYGIGLKKDDQEGTDAINAALERMYADG 264 >gi|237667290|ref|ZP_04527274.1| extracellular solute-binding protein, family 3 [Clostridium butyricum E4 str. BoNT E BL5262] gi|237655638|gb|EEP53194.1| extracellular solute-binding protein, family 3 [Clostridium butyricum E4 str. BoNT E BL5262] Length = 272 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 38/238 (15%), Positives = 80/238 (33%), Gaps = 10/238 (4%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 + L G++ V +G+ GFD+D +A+ + K+++ ++ + Sbjct: 39 DKDELIIGLDDTFVPMGFKDESGELVGFDIDLAKAVGEKL---NKKVKFQAIDWSMKETE 95 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151 L ID++ R+ + + Q + I+S + L+G + Q Sbjct: 96 LNGGNIDLIWNGYSINDERKEKVEF--SKPYLNNTQIIVTLADSTINSKADLAGKKVGAQ 153 Query: 152 AGTTTELTLAD--YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 +T + + + + FE + A R DA D L + Sbjct: 154 NQSTAVDAVEADGDIMSTFDGGNLVTFEDNNQALMDLEAKRLDAIVVDE-ILARYYIKAR 212 Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 ++ IL + I +GDT++ + +V + K +D Sbjct: 213 GEEKYKILTENFGDEQYGVGIRKGDTKFVEAFNKALSEVVGDGQAAEISK--KWFGED 268 >gi|171742864|ref|ZP_02918671.1| hypothetical protein BIFDEN_01980 [Bifidobacterium dentium ATCC 27678] gi|171278478|gb|EDT46139.1| hypothetical protein BIFDEN_01980 [Bifidobacterium dentium ATCC 27678] Length = 281 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 48/278 (17%), Positives = 100/278 (35%), Gaps = 14/278 (5%) Query: 6 FVSILCL--IILFFTSFSTNASILGDIKKRG-FLKCGINTGLVGFAEVKANGDWKGFDVD 62 ++LC I++ ++ T+ S++ + + +G + G+ T G + D+ GFD+ Sbjct: 8 IAAMLCAASIVVGVSACGTSISVVTNGQAQGPTITIGVATDQPGLGLLHGK-DYSGFDIT 66 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 R ++ + ++ + + R AL S +D++ + + + A +T Sbjct: 67 VARYVAQYLGFADKQVVFAKVIPSTRVSALTSGDVDMVVDSFATNTDHDDEVTFAGPYLT 126 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 K GI SV L G ++C G+ + + + K + + Sbjct: 127 VRRDLLIRADDKDGILSVDDLDGKTVCTAKGSISGSDMRNL----TDKMTVEERDTYPQC 182 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A DA D + L L + ++ + + A+ G +E + Sbjct: 183 VTALMIGEADAIISDDAILTGLAA-DRGGGYLKVVGEPFGEQSYGIAVRNGKSELVGQID 241 Query: 243 WTHYAMVTAEELGITQKNINQ-----VSKDTTNPDVQR 275 AMV + + Q V + P V+R Sbjct: 242 AALKAMVADGSWSSAVQALKQDIGYTVDVSSNPPTVRR 279 >gi|292669467|ref|ZP_06602893.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Selenomonas noxia ATCC 43541] gi|292648920|gb|EFF66892.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Selenomonas noxia ATCC 43541] Length = 257 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 46/264 (17%), Positives = 83/264 (31%), Gaps = 16/264 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59 + K V L+ L + ++ L+ G F ++GF Sbjct: 3 LKKLALVLTGALVSLALVGCGGSNDQAK--QESKVLRVGSAIDFAPFEFQDEGQKDYQGF 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D RA++ + S+ + + ALQ+K ID++ R+ + Sbjct: 61 DMDLIRAIAKEMG---SEAEIQNIGFDGLIPALQAKNIDVIISGMTINDERKERVNF--S 115 Query: 120 PITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y G ++ + I S S L G + VQ GTT+ + + Sbjct: 116 DPYYQSGLTMVVRSDEENIKSFSDLKGHKVAVQIGTTSAKMVKEM-----EGVTITELNT 170 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + +A DA D + L D +S A+ + + E Sbjct: 171 PADCFIELKARGVDAVVNDRPVNDYYINQSQAVG-VKSLDDKLSAEDYGIAMAKDNVELQ 229 Query: 239 NIVSWTHYAMVTAEEL-GITQKNI 261 ++ + E I QK Sbjct: 230 KKINEALKKLHDNGEYDKIYQKWF 253 >gi|296158005|ref|ZP_06840838.1| extracellular solute-binding protein family 3 [Burkholderia sp. Ch1-1] gi|295891773|gb|EFG71558.1| extracellular solute-binding protein family 3 [Burkholderia sp. Ch1-1] Length = 251 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 48/272 (17%), Positives = 89/272 (32%), Gaps = 25/272 (9%) Query: 1 MYKDFFVSILCLIILFFT---SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M +S+ C+ S + +A L + NG Sbjct: 1 MKLQRLLSLACVTFAVTFGGFSGAASAQTPD------VLNVATDATFPPMEYT-ENGART 53 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD AL+ A+ ++Q+ ++ K L + + D T R + Sbjct: 54 GFDVDLMNALAKAMGK---RVQWTDIDFKGLIPGLIAHRFDAAISAIYITDERAKVVDFT 110 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y G ++ I +V+ L+G + VQ GT + L D F N + E Sbjct: 111 DS--YYAGGLAVLVKSDSPIKTVADLNGKKVSVQVGTKSVNFLRDNFPQINR----VEVE 164 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + +E+ R DA A Y + T +L ++ A+ + + + Sbjct: 165 KNQEMFDLVGIGRADAAVTGKPAAYQVAKTRTG---FRVLDKTLTTEAYGIAVRKDEPQL 221 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 + A+ + G + + + Sbjct: 222 KAAFN---TALARIKADGTYAAIVKKWFGASA 250 >gi|15807269|ref|NP_295999.1| amino acid ABC transporter periplasmic amino acid-binding protein [Deinococcus radiodurans R1] gi|6460086|gb|AAF11825.1|AE002060_4 amino acid ABC transporter, periplasmic amino acid-binding protein [Deinococcus radiodurans R1] Length = 272 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 48/249 (19%), Positives = 93/249 (37%), Gaps = 16/249 (6%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 S S A+ + ++KK+G L G + F ++G +GFD+D RA++ + ++ Sbjct: 33 SCSAGAASVAEVKKKGTLVLGTDPTFAPFEFKGSDGQVQGFDIDIARAVAHDLG---VRL 89 Query: 79 QYLPLNAKERFL-ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--K 135 + P+ A+ S ++D+ T R + + Y Q FI+ Sbjct: 90 EIRPVGFGALMPQAVTSGRVDVAMSGITITPERATVVTFSQ--PYYRSAQVFIVRSGNPG 147 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 + + + G ++ VQA TT + K ++ A R+ R A Sbjct: 148 KFTWPADVKGKTVGVQANTTGQYAAEQTLKPRGATIKV--YDDFAAGLADVRSGRIAALI 205 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 GD + LK P + ++ +G ++ + T + + E Sbjct: 206 GDAPTVNDLKKRL--PGQFDKAGAVLVAEDYGMVFRKG-SDLAAAANRTLARLKRSGE-- 260 Query: 256 ITQKNINQV 264 QK +N+ Sbjct: 261 -YQKLLNKW 268 >gi|283784571|ref|YP_003364436.1| glutamine ABC transporter, substrate-binding protein [Citrobacter rodentium ICC168] gi|282948025|emb|CBG87589.1| glutamine ABC transporter, substrate-binding protein [Citrobacter rodentium ICC168] Length = 248 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 49/267 (18%), Positives = 90/267 (33%), Gaps = 23/267 (8%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K L + L F S A L +T V F + + + GFD+ Sbjct: 1 MKSVLKVSLAALTLAFAVSSHAADK--------KLVVATDTAFVPFEFKQGD-KYVGFDI 51 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D A++ + D + P++ ALQ+K +D+ T R+ ++ + Sbjct: 52 DLWAAVAKELKLD---YELKPMDFSGIIPALQTKNVDLALAGITITDERKKAIDFSDG-- 106 Query: 122 TYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G ++ I SV L G ++ V++GT + DY KA+ F ++ Sbjct: 107 YYKSGLLVMVKANNNDIKSVKDLDGKTLAVKSGTGSV----DYAKANIKTKDLRQFPNID 162 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +R DA D + T + + + + A +G + Sbjct: 163 NAYMELGTNRADAVLHDTPNILYFIKTAGN-GQFKAVGESLEAQQYGIAFPKGSDDLREK 221 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKD 267 V+ T + G + + Sbjct: 222 VNGALK---TLRDNGTYNEIYKKWFGT 245 >gi|306822682|ref|ZP_07456060.1| glutamate ABC superfamily ATP binding cassette transporter, binding protein [Bifidobacterium dentium ATCC 27679] gi|304554227|gb|EFM42136.1| glutamate ABC superfamily ATP binding cassette transporter, binding protein [Bifidobacterium dentium ATCC 27679] Length = 281 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 47/278 (16%), Positives = 99/278 (35%), Gaps = 14/278 (5%) Query: 6 FVSILCL--IILFFTSFSTNASILGDIKKRG-FLKCGINTGLVGFAEVKANGDWKGFDVD 62 ++LC I++ ++ T+ S++ + + +G + G+ T G + D+ GFD+ Sbjct: 8 IAAMLCAASIVVGVSACGTSISVVTNGQAQGPTITIGVATDQPGLGLLHGK-DYSGFDIT 66 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 R ++ + ++ + + R AL S +D++ + + + A +T Sbjct: 67 VARYVAQYLGFAGKQVVFAKVIPSTRVSALTSGDVDMVVDSFATNTDHDDEVTFAGPYLT 126 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 K GI SV L G ++C G+ + + + K + + Sbjct: 127 VRRDLLIRADDKDGILSVDDLDGKTVCTAKGSISGSDMRNL----TDKMTVEERDTYPQC 182 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A DA D L L + ++ + + A+ G +E + Sbjct: 183 VTALMIGEADAIISDDVILTGLAA-DRGGGYLKVVGEPFGEQSYGIAVRNGKSELVGQID 241 Query: 243 WTHYAMVTAEELGITQKNINQ-----VSKDTTNPDVQR 275 AMV + + Q + + P V+R Sbjct: 242 AALKAMVADGSWSSAVQALKQDIGYTIDVSSNPPTVRR 279 >gi|296111778|ref|YP_003622160.1| amino acid ABC transporter, amino acid-binding protein [Leuconostoc kimchii IMSNU 11154] gi|295833310|gb|ADG41191.1| amino acid ABC transporter, amino acid-binding protein [Leuconostoc kimchii IMSNU 11154] Length = 284 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 46/276 (16%), Positives = 89/276 (32%), Gaps = 27/276 (9%) Query: 1 MYKDFFV-SILCLIILFFTSF------------------STNASILGDIKKRGFLKCGIN 41 M K V SI+ LI++ S+ +T IK+ + G++ Sbjct: 4 MKKKIIVNSIIGLIVVGIVSWLAISLNSGTKNTAQNTQKATKTDDWQRIKRDKQITIGLD 63 Query: 42 TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101 V NG GFDVD A+ ++ +++ P++ + L + ID + Sbjct: 64 DTFVPMGFRDKNGKIIGFDVDLANAVFKSMG---ITVKWQPIDWSMKETELNTGNIDAIW 120 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 T R + + Q + KK I+ S + G + Q ++ + T Sbjct: 121 NGYTKTAARAKQVSF--SKTYHRATQVLVTLKKNNINQFSDMQGKVLGDQTASSGDETFN 178 Query: 162 DY---FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218 ++ K + I ++ ++ A R D D P + + Sbjct: 179 EHPKVLKQYVKDQKVIGYDTFDKAFTDLNAGRIDGLLIDEDYARYYVAHQANPKNYTVTV 238 Query: 219 DIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 + A + D + V+ T + Sbjct: 239 GDFAVDQTAVGFRKSDVKLRQAVNKTLDKFKKDGRM 274 >gi|157362890|ref|YP_001469657.1| extracellular solute-binding protein [Thermotoga lettingae TMO] gi|157313494|gb|ABV32593.1| extracellular solute-binding protein family 3 [Thermotoga lettingae TMO] Length = 263 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 41/243 (16%), Positives = 88/243 (36%), Gaps = 16/243 (6%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 A+ L +I KRG + + V +G GF ++ + + +I++ Sbjct: 22 AATTLEEIVKRGKIIIATDMTSVPMQYRDPSGKPTGFTIELMELAAKYMG---VQIEWQD 78 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + + +L +K++D+++ N TL R ++ + + G + K + Sbjct: 79 MAWESLIPSLLTKKVDMIAANMSMTLTRLKTIRFSE--PFFLTGIRVLARKDSKMVYWKD 136 Query: 143 LSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + I G+ + + P ++E + E + + R DA D Sbjct: 137 IIDPSVKIGATMGSVHADYVEKQLRK-----KPFLYENLAEWLSDLKTGRIDAVMDDEML 191 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L N E IL + A Q D+E ++V+W ++ + + G + Sbjct: 192 CIELVKNNP---ELKILEGYVRPDTYGLAFRQ-DSESDSLVNWFNWFIRWVKLTGEYGEI 247 Query: 261 INQ 263 + Sbjct: 248 YKK 250 >gi|317153462|ref|YP_004121510.1| family 3 extracellular solute-binding protein [Desulfovibrio aespoeensis Aspo-2] gi|316943713|gb|ADU62764.1| extracellular solute-binding protein family 3 [Desulfovibrio aespoeensis Aspo-2] Length = 280 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 44/234 (18%), Positives = 91/234 (38%), Gaps = 16/234 (6%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 + S + I KRG ++ G +T +A +G++ GF+++ + L+ + + Sbjct: 31 ATSKTQDQTSQIESILKRGAIRVGFDT-FKPWAMKDKDGNYIGFEIEVAQRLAKDMGVE- 88 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-- 133 I+++P AL + + DI+ T R + + + F G + Sbjct: 89 --IEFVPTKWSGIIPALLTDKFDIIIGGMSVTPARNLKVNFSI--PYEFSGMSIVASSAL 144 Query: 134 KKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191 G +++ Q + +I V+ GTT ++ N+ + F+ + R Sbjct: 145 AGGRTTLDQFNTPDTTISVRLGTTAAEAAKNFLPKANILF----FDEESQTIQELLNERV 200 Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV-SWT 244 A S L ++ L S P+A A+ +GD ++ N + +W Sbjct: 201 HALVA-SSPLPGNLAAEYADKLYLPLSGDFSSEPIAFAVRKGDQDFLNWLDNWV 253 >gi|170770021|ref|ZP_02904474.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia albertii TW07627] gi|218548382|ref|YP_002382173.1| arginine ABC transporter periplasmic-binding protein [Escherichia fergusonii ATCC 35469] gi|170121087|gb|EDS90018.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia albertii TW07627] gi|218355923|emb|CAQ88538.1| arginine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia fergusonii ATCC 35469] gi|323967298|gb|EGB62721.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli M863] gi|323976752|gb|EGB71840.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli TW10509] gi|324112655|gb|EGC06631.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia fergusonii B253] gi|325496805|gb|EGC94664.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia fergusonii ECD227] gi|327253650|gb|EGE65279.1| arginine-binding periplasmic protein 1 [Escherichia coli STEC_7v] Length = 243 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 51/269 (18%), Positives = 95/269 (35%), Gaps = 32/269 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ T ++ F + AN GFD Sbjct: 1 MKKVLIAALIAGFSLSATAAET-------------IRFATEASYPPFESMDANNQIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL I + + +L+ +++D + D T RE + Sbjct: 48 VDLAQALCKEIDATCT---FSNQAFDSLIPSLKFRRVDAVMAGMDITPEREKQVLFT--- 101 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+D + ++ +SV QL G + VQ GTT + + D + + + ++ + Sbjct: 102 TPYYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFIMD----KHPEITTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + D P + + K L A+ QG+TE Sbjct: 158 NAKLDLQNGRIDGVFGDTAVVTEWLK--DNPKLAAVGDKVTDKDYFGTGLGIAVRQGNTE 215 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVS 265 + A+ ++ G + N+ Sbjct: 216 LQQKFN---TALEKVKKDGTYETIYNKWF 241 >gi|62179395|ref|YP_215812.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|224582641|ref|YP_002636439.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|62127028|gb|AAX64731.1| ABC superfamily (bind_prot), glutamine high-affinity transporter [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|224467168|gb|ACN44998.1| glutamine ABC transporter periplasmic-binding protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|322713866|gb|EFZ05437.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 248 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 53/267 (19%), Positives = 89/267 (33%), Gaps = 23/267 (8%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K L + L F +S A L +T V F + + + GFDV Sbjct: 1 MKSLLKVSLAALTLAFAVYSHAADK--------KLVVATDTAFVPFEFKQGD-KYVGFDV 51 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D A++ + D P++ ALQ+K ID+ T R+ ++ + Sbjct: 52 DLWDAIAKELKLD---YTLKPMDFSGIIPALQTKNIDLALAGITITDERKKAIDFSDG-- 106 Query: 122 TYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G ++ I SV L G + V++GT + DY KA+ F ++ Sbjct: 107 YYKSGLLVMVKANNNDIKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNID 162 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +R DA D + T + + + + A +G E Sbjct: 163 NAYMELGTNRADAVLHDTPNILYFIKTAGN-GQFKAVGESLEAQQYGVAFPKGSDELREK 221 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKD 267 V+ T E G + + Sbjct: 222 VNGALK---TLRENGTYNEIYKKWFGT 245 >gi|300311472|ref|YP_003775564.1| amino acid ABC transporter/signal transduction system periplasmic protein/domain-containing protein [Herbaspirillum seropedicae SmR1] gi|167731101|emb|CAP19663.1| periplasmic component protein [Herbaspirillum seropedicae] gi|300074257|gb|ADJ63656.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain protein [Herbaspirillum seropedicae SmR1] Length = 267 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 45/272 (16%), Positives = 85/272 (31%), Gaps = 17/272 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDV 61 K + ++ + +L + + A +L +K G LK + F G+ GF+V Sbjct: 6 KQWLLAGVGAALLASSLSVSAADLLQSVKSSGTLKVALEGNYPPFNFKDPKTGELTGFEV 65 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D + L++ + P + L + + D++ T R+ + F Sbjct: 66 DVAKLLAAKLGVKPV---FTTTEWSGILAGLGAGKYDVIINQVGITDERQKA--FDFSDP 120 Query: 122 TYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I+ K + S+ L G + + GT E + Sbjct: 121 YTLSSAQLIVRKDEKREFKSLEDLKGKKLGLGQGTNFEQK-----AKAVPGIDVRTYPGS 175 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A A R DA D S L L + P I + + +G+ E+ Sbjct: 176 PEYLADLAAGRIDAALND-SLLVGYILKSTNLPLKAGSP-IGAVDKIGIPFRKGNPEFKA 233 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 ++ + + D + P Sbjct: 234 ALNKALADIKADGSFKAASE--KWFGIDVSQP 263 >gi|225018272|ref|ZP_03707464.1| hypothetical protein CLOSTMETH_02210 [Clostridium methylpentosum DSM 5476] gi|224948969|gb|EEG30178.1| hypothetical protein CLOSTMETH_02210 [Clostridium methylpentosum DSM 5476] Length = 263 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 45/272 (16%), Positives = 92/272 (33%), Gaps = 24/272 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG--------FLKCGINTGLVGFAEVKA 52 M K +IL +L T F K G L G++ + Sbjct: 1 MKK--LAAILLAGVLALTVFVGCGG-----KDAGNADNGNKETLVVGLDPEFPPMGFKEN 53 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 + + GFD+D A++ + ++++ P++ + L + + +ID++ T RE Sbjct: 54 DDEIVGFDIDLANAVAEEMG---VQMKFQPIDWSSKELEIDTGRIDMIWNGFSVTPEREE 110 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 +L L + + K IS V L G + +Q ++ + Sbjct: 111 ALLL--TKPYLNNNMIVVTLKDSAISKVEDLEGKKVVLQKESSALDAFQE-APVSEKVAD 167 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + R +A D + A N + IL + + A + + Sbjct: 168 LTQLSSNVDCFQDLENGRAEAMVVDETV--AKYYLNLHKDKFKILDESLGAEKYAIGLKK 225 Query: 233 GDTEWYNIVSWTHYAMVTAEELG-ITQKNINQ 263 G+ E + + +V + I++K + Sbjct: 226 GNDELKDKLEAAITKVVKNGKAKEISEKWFGE 257 >gi|302526883|ref|ZP_07279225.1| predicted protein [Streptomyces sp. AA4] gi|302435778|gb|EFL07594.1| predicted protein [Streptomyces sp. AA4] Length = 495 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 49/264 (18%), Positives = 97/264 (36%), Gaps = 18/264 (6%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKGFDVDF 63 ++ L + ++ L ++ G L+ G + F A G GFD+D Sbjct: 18 LLAFLPMSAATASAAEPQGGKLAALR-SGQTALRVGTDATFPPFEFTDAKGGQLGFDIDL 76 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 RAL+ K+ ++ + ALQ+ QID+ + + R+ ++ I Y Sbjct: 77 VRALAQRAGIK--KVDFVQMPFGNIVPALQANQIDVGASAIYISPARQKAVDF--SDIYY 132 Query: 124 FDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 G + K ++S+ L+G + VQ GT + LA + A I + E++ Sbjct: 133 PGGLAVFVSDKDNSVASLKDLAGKRVAVQVGTKSVDWLAQHQPAAQ----LITAQTNEQM 188 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 ++ + + DA A + D +++ A + D E + Sbjct: 189 FSSVKLGQADAVVTGAPAGKYFIAQQ---GGLKQVGDRLTEENYGYAFQKADPELRTAFN 245 Query: 243 WTHYAMVTAEELGITQKNINQVSK 266 A+ + G Q++ + Sbjct: 246 ---AALKQMRDDGSYQQSTEKWFG 266 >gi|238019978|ref|ZP_04600404.1| hypothetical protein VEIDISOL_01854 [Veillonella dispar ATCC 17748] gi|237863502|gb|EEP64792.1| hypothetical protein VEIDISOL_01854 [Veillonella dispar ATCC 17748] Length = 270 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 42/271 (15%), Positives = 92/271 (33%), Gaps = 13/271 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K V + + ++ F + + + + + + G++ G+ G D+ Sbjct: 4 KKMMAVGLAAVSMMVFVTGCGSDTKTANTELPKKIVIGLDDSFPPMGFKDDKGEIVGLDI 63 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D + + ++++ ++ + L+SK+ID L + RE ++ Sbjct: 64 DMAKEAAKRAG---MEVEFKAIDWSSKEAELKSKKIDALWNGLTVSPEREKNILF--SNP 118 Query: 122 TYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 D Q ++ I S + L+G + VQ +T E L + +K + Sbjct: 119 YMKDKQYIVVRNDDDSIKSKADLAGKVVGVQQASTGESALQNDPSGKTVK-ETKSYADFV 177 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDTEWYN 239 R DA D A L P ++ I+ A + DT + Sbjct: 178 SAFMDLGIGRVDAVIADGVI--ARYLMTKEPGKYKIVDGTDYGVDNFAVGFRKDDTALRD 235 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 ++ M ++ G K + + + + Sbjct: 236 NINGILADM---KKDGTADKIVEKWLGSSAD 263 >gi|298501903|ref|YP_003723843.1| amino acid ABC superfamily transporter ATP-binding protein [Streptococcus pneumoniae TCH8431/19A] gi|298237498|gb|ADI68629.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus pneumoniae TCH8431/19A] Length = 302 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 46/274 (16%), Positives = 90/274 (32%), Gaps = 18/274 (6%) Query: 1 MYKDFFVSI-LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56 M K L ++ L F + ++ + IK +G L +N F V Sbjct: 38 MKKVLMTMFGLVMLPLLFACSNNQSAGIEAIKSKGKLVVALNPDFAPFEYQKVVDGKNQI 97 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G D++ +A+++ + + ++ P++ ++QS + D+ T R S Sbjct: 98 VGSDIELAKAIATELGVE---LELSPMSFDNVLASVQSGKADLAISGVSKTDER--SKVF 152 Query: 117 AFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F Y I+ K SV+ L+ + Q G+ E D + Sbjct: 153 DFSTPYYTAKNKLIVKKSDLATYQSVNDLAQKKVGAQKGSIQETMAKDLL----QNSSLV 208 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + ++ + DA + N + + + A A+ + Sbjct: 209 SLPKNGNLITDLKSGQVDAVIFEEPVAKGFVENNPDLAIADLNFEKEQDDSYAVAMKKDS 268 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 E V T + + EL K I K + Sbjct: 269 KELKEAVDKTIQKLKESGELD---KLIEDAFKAS 299 >gi|313895101|ref|ZP_07828658.1| glutamine ABC transporter, periplasmic glutamine-binding protein GlnH [Selenomonas sp. oral taxon 137 str. F0430] gi|312975996|gb|EFR41454.1| glutamine ABC transporter, periplasmic glutamine-binding protein GlnH [Selenomonas sp. oral taxon 137 str. F0430] Length = 257 Score = 133 bits (334), Expect = 6e-29, Method: Composition-based stats. Identities = 46/264 (17%), Positives = 80/264 (30%), Gaps = 14/264 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59 M I +L S ++ L+ G F ++GF Sbjct: 1 MKLKKLAMIFTGALLSLAVVGCGGSGDQAKQEAKTLRVGATIDFAPFEFQDEGQKEYQGF 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D RA++ + + + + ALQ+K ID++ R+ + Sbjct: 61 DMDLIRAIAKEMGREA---EIQNIGFDGLIPALQAKNIDVIISGMTINDERKEKVNF--S 115 Query: 120 PITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y G ++ + I S + L G + Q GTT+ L + + Sbjct: 116 APYYQSGLTMVVRSDEEAIKSFNDLKGHKVAAQIGTTSANMLKE-----QEGITVLELNT 170 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + +A DA D L D++S AI + +TE Sbjct: 171 PADCFMELKARGVDAVVNDRPVNDYYINQTQAVG-VKSLSDMLSAEEYGIAISKDNTELQ 229 Query: 239 NIVSWTHYAMVTAEEL-GITQKNI 261 + + E I QK Sbjct: 230 KEIDAALKKLHDNGEYDKIYQKWF 253 >gi|291087463|ref|ZP_06346539.2| amino acid ABC transporter substrate-binding protein [Clostridium sp. M62/1] gi|291075062|gb|EFE12426.1| amino acid ABC transporter substrate-binding protein [Clostridium sp. M62/1] Length = 287 Score = 133 bits (334), Expect = 6e-29, Method: Composition-based stats. Identities = 47/230 (20%), Positives = 87/230 (37%), Gaps = 17/230 (7%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 G L G N + + G DV+ A+ + D +Q + AL Sbjct: 70 GTLIMGTNATFPPYEYYDGD-AIVGIDVEIAEAIGEKLGMD---VQVEDMEFDALIPALV 125 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153 S ++D ++ T RE S+ T Q I+ + I+SV L+G + VQ G Sbjct: 126 SDKVDFVAAGMTVTPDREASVNFTDTYAT--AAQVIIVKEGSDIASVDDLAGKVVGVQLG 183 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 TT +L +++ + + E + + DA D + ++ Sbjct: 184 TTGDLLVSEI-----EGTTVERYNKGFEAVQSVTQGKIDAVVIDNAPAKNFVAQDEG--- 235 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 VIL + +S A A+ + +TE ++ A+ +E G +++ Sbjct: 236 LVILEEALSSEDYAMAVNKDNTELLEQING---AIAELKEEGTLDAIVDK 282 >gi|307705070|ref|ZP_07641951.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus mitis SK597] gi|307621369|gb|EFO00425.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus mitis SK597] Length = 271 Score = 133 bits (334), Expect = 6e-29, Method: Composition-based stats. Identities = 44/276 (15%), Positives = 93/276 (33%), Gaps = 23/276 (8%) Query: 1 MYKDFFVSILCLIILFF------TSFSTNASILGDIKKRGFLKCGINTGLVGF---AEVK 51 M ++ +LC + F + + + S + IK++G L + F + V Sbjct: 1 MKSKKWIFVLCSFLASFFLVACQSGSNGSQSAVEAIKQKGKLVVATSPDYAPFEFQSLVD 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G D+D +A++ + K++ ++ +LQ+ + D+ T R Sbjct: 61 GKNQVVGADIDMAQAIADELG---VKLEISSMSFDNVLTSLQTGKADLAVAGISATDER- 116 Query: 112 ISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 F Y + F++ K ++ L A+I Q GT E + + Sbjct: 117 -KEVFDFSIPYYENKISFLVRKADVEKYKDLTSLESANIAAQKGTVPESMVKEQLPKAQ- 174 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + E +A + DA D + N + + + A A Sbjct: 175 ---LTSLTNMGEAVNELQAGKVDAVHMDEPVALSYAAKNADLAVATVSLKMKDGEANAVA 231 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 + + + +V ++ G QK + + + Sbjct: 232 LRKNSADLKEVVDKVIQ---KLKDDGTYQKYLEKAA 264 >gi|182683078|ref|YP_001834825.1| amino acid ABC transporter, periplasmic amino acid-binding protein, putative [Streptococcus pneumoniae CGSP14] gi|182628412|gb|ACB89360.1| amino acid ABC transporter, periplasmic amino acid-binding protein, putative [Streptococcus pneumoniae CGSP14] Length = 302 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 46/274 (16%), Positives = 90/274 (32%), Gaps = 18/274 (6%) Query: 1 MYKDFFVSI-LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56 M K L ++ L F + ++ + IK +G L +N F V Sbjct: 38 MKKVLMTMFGLVMLPLLFACSNNQSAGIEAIKSKGKLVVALNPDFAPFEYQKVVDGKNQI 97 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G D++ +A+++ + + ++ P++ ++QS + D+ T R S Sbjct: 98 VGSDIELAKAIATELGVE---LELSPMSFDNVLASVQSGKADLAISGVSKTDER--SKVF 152 Query: 117 AFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F Y I+ K SV+ L+ + Q G+ E D + Sbjct: 153 DFSTPYYTAKNKLIVKKSDLATYQSVNDLAQKKVGAQKGSIQETMAKDLL----QNSSLV 208 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + ++ + DA + N + + + A A+ + Sbjct: 209 SLPKNGNLITDLKSGQVDAVIFEEPVAKGFVENNPDLAIADLNFEKEQDDSYAVAMKKDS 268 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 E V T + + EL K I K + Sbjct: 269 KELKEAVDKTIQKLKESGELD---KLIEDAFKAS 299 >gi|309800806|ref|ZP_07694938.1| ABC transporter, substrate-binding protein, family 3 [Bifidobacterium dentium JCVIHMP022] gi|308222342|gb|EFO78622.1| ABC transporter, substrate-binding protein, family 3 [Bifidobacterium dentium JCVIHMP022] Length = 271 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 45/272 (16%), Positives = 95/272 (34%), Gaps = 12/272 (4%) Query: 10 LCLIILFFTSFSTNASILGDIKKRG-FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 I++ ++ T+ S++ + + +G + G+ T G + D+ GFD+ R ++ Sbjct: 4 AASIVVGVSACGTSISVVTNGQAQGPTITIGVATDQPGLGLLHGK-DYSGFDITVARYVA 62 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 + ++ + + R AL S +D++ + + + A +T Sbjct: 63 QYLGFAGKQVVFAKVIPSTRVSALTSGDVDMVVDSFATNTDHDDEVTFAGPYLTVRRDLL 122 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 K GI SV L G ++C G+ + + + K + + A Sbjct: 123 IRADDKDGILSVDDLDGKTVCTAKGSISGSDMRNL----TDKMTVEERDTYPQCVTALMI 178 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 DA D L L + ++ + + A+ G +E + AM Sbjct: 179 GEADAIISDDVILTGLAA-DRGGGYLKVVGEPFGEQSYGIAVRNGKSELVGQIDAALKAM 237 Query: 249 VTAEELGITQKNINQ-----VSKDTTNPDVQR 275 V + + Q + + P V+R Sbjct: 238 VADGSWSSAVQALKQDIGYTIDVSSNPPTVRR 269 >gi|194433178|ref|ZP_03065460.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Shigella dysenteriae 1012] gi|194418675|gb|EDX34762.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Shigella dysenteriae 1012] gi|332088934|gb|EGI94046.1| glutamine-binding periplasmic protein [Shigella boydii 5216-82] gi|332091034|gb|EGI96124.1| glutamine-binding periplasmic protein [Shigella dysenteriae 155-74] Length = 248 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 51/267 (19%), Positives = 89/267 (33%), Gaps = 23/267 (8%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K L + L F S A L +T V F + + + GFDV Sbjct: 1 MKSVLKVSLAALTLAFAVSSHAADK--------KLVVATDTAFVPFEFKQGD-KYVGFDV 51 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D A++ + D + P++ ALQ+K +D+ T R+ ++ + Sbjct: 52 DLWAAIAKELKLD---YELKPMDFSGIIPALQTKNVDLALAGITITDERKKAIDFSDG-- 106 Query: 122 TYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y ++ + SV L G + V++GT + DY KA+ F ++ Sbjct: 107 YYKSDLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNID 162 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +R DA D + T + + D + A +G E + Sbjct: 163 NAYMELGTNRADAVLHDTPNILYFIKTAGN-GQFKAVGDSLEAQQYGIAFPKGSDELRDK 221 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKD 267 V+ T E G + + Sbjct: 222 VNGALK---TLRENGTYNEIYKKWFGT 245 >gi|168263667|ref|ZP_02685640.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|198245988|ref|YP_002214793.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|197940504|gb|ACH77837.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205347748|gb|EDZ34379.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 248 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 53/267 (19%), Positives = 88/267 (32%), Gaps = 23/267 (8%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K L + L F S A L +T V F + + + GFDV Sbjct: 1 MKSLLKVSLAALTLAFAVSSHAADK--------KLVVATDTAFVPFEFKQGD-KYVGFDV 51 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D A++ + D P++ ALQ+K ID+ T R+ ++ + Sbjct: 52 DLWDAIAKELKLD---YTLKPMDFSGIIPALQTKNIDLALAGITITDERKKAIDFSDG-- 106 Query: 122 TYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G ++ I SV L G + V++GT + DY KA+ F ++ Sbjct: 107 YYKSGLLVMVKANNNDIKSVKDLDGKVVAVKSGTGSV----DYTKANIKTKDLRQFPNID 162 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +R DA D + T + + + + A +G E Sbjct: 163 NAYMELGTNRADAVLHDTPNILYFIKTAGN-GQFKAVGESLEAQQYGVAFPKGSDELREK 221 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKD 267 V+ T E G + + Sbjct: 222 VNGALK---TLRENGTYNEIYKKWFGT 245 >gi|56414070|ref|YP_151145.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197362993|ref|YP_002142630.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56128327|gb|AAV77833.1| glutamine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197094470|emb|CAR59987.1| glutamine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 248 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 53/267 (19%), Positives = 87/267 (32%), Gaps = 23/267 (8%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K L + L F S A L +T V F + + + GFDV Sbjct: 1 MKSLLKVSLAALTLAFAVSSHAADK--------KLVVATDTAFVPFEFKQGD-KYVGFDV 51 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D A++ + D P++ ALQ+K ID+ T R+ ++ + Sbjct: 52 DLWDAIAKELKLD---YTLKPMDFSGIIPALQTKNIDLALAGITITDERKKAIDFSDG-- 106 Query: 122 TYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G ++ I SV L G + V++GT + DY KA+ F + Sbjct: 107 YYKSGLLVMVKANNNDIKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNIN 162 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +R DA D + T + + + + A +G E Sbjct: 163 NAYMELGTNRADAVLHDTPNILYFIKTAGN-GQFKAVGESLEAQQYGVAFPKGSDELREK 221 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKD 267 V+ T E G + + Sbjct: 222 VNGALK---TLRENGTYNEIYKKWFGT 245 >gi|68535730|ref|YP_250435.1| glutamate ABC transport system, solute-binding protein [Corynebacterium jeikeium K411] gi|260578185|ref|ZP_05846105.1| glutamate ABC superfamily ATP binding cassette transporter, binding protein [Corynebacterium jeikeium ATCC 43734] gi|68263329|emb|CAI36817.1| glutamate ABC transport system, solute-binding protein [Corynebacterium jeikeium K411] gi|258603724|gb|EEW16981.1| glutamate ABC superfamily ATP binding cassette transporter, binding protein [Corynebacterium jeikeium ATCC 43734] Length = 298 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 39/273 (14%), Positives = 87/273 (31%), Gaps = 21/273 (7%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 L +L DI + G + G E + + G D D R + I Sbjct: 24 LTACGSGGARDLLADI-ESGHVVMGTKYDQPNLGERTPDKQFAGLDTDVSRYVVEYIAKK 82 Query: 75 ----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130 +I++ + +R + + ++++++ R ++ A Q + Sbjct: 83 HGWATPEIEWRETPSAQRETLINNGEVNMITATYSINKGRLKAVDFA--GPYVVTHQALL 140 Query: 131 MHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 + + GI+ ++ ++ G +C +G+T + D F+ + Sbjct: 141 VREDSGINGLNDIAPGTRLCSVSGSTPAQKVKDALPE----VQLQEFDTYAACAEGLKQG 196 Query: 190 RCDAYTGDISALYALKLTNDR--PSEHVIL------PDIISKSPLAPAIIQGDTEWYNIV 241 DA T D + L ++ ++ + + +GD + V Sbjct: 197 VVDATTTDATILAGFAQRYKERFDEDYSVIQLKNDDGSFWTNENYGIGLPKGDDKAKAEV 256 Query: 242 SWTHYAMVTAEEL-GITQKNINQVSKDTTNPDV 273 + M + E I KN+ P + Sbjct: 257 NEALNEMHDSGEFQKIVAKNLGDNVDIGEKPKI 289 >gi|163789715|ref|ZP_02184152.1| extracellular solute-binding protein, family 3 [Carnobacterium sp. AT7] gi|159874937|gb|EDP69004.1| extracellular solute-binding protein, family 3 [Carnobacterium sp. AT7] Length = 274 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 45/279 (16%), Positives = 100/279 (35%), Gaps = 21/279 (7%) Query: 2 YKDFFVSILCLIILFFTSF----------STNASILGDIKKRGFLKCGINTGLVGFAEVK 51 K + ++ + ++ LF ++ + + +L ++ G LK G+ + + Sbjct: 3 KKKWMLAGIAVVALFVSACGTSTKEDATSTADGDLLKSVQDAGVLKVGVMGTYQPYNFIN 62 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 + D GFD D + ++ + D I+++ LQ+ + D+++ T R+ Sbjct: 63 EDKDMDGFDADIAKEIAKGLDVD---IEFVSQEFSGMIAGLQTGKFDMVASQMTITDDRK 119 Query: 112 ISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 + + I+ I+SV G I V GT E L + + Sbjct: 120 KEMLF--SDPYITNQVKVIVKDDNTEITSVEDFVGKDIGVGLGTNDETYLRNELMPEVGE 177 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 ++ ++ V + R DA ++ AL + + + + I A+ Sbjct: 178 FNIRTYDDVITSLKDLDSGRIDATINNMYAL--KPIIEANGLKIKAVGEPIKSDQAGIAV 235 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 G+ + V+ T A + A G + + + Sbjct: 236 QLGNEAFIEEVN-TILADIKA--DGTYDEIFMKWFGEAP 271 >gi|134046501|ref|YP_001097986.1| extracellular solute-binding protein [Methanococcus maripaludis C5] gi|132664126|gb|ABO35772.1| amino acid ABC transporter substrate-binding protein, PAAT family [Methanococcus maripaludis C5] Length = 260 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 51/267 (19%), Positives = 97/267 (36%), Gaps = 16/267 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKR-GFLKCGINTGLVGFAEVKANGDWKGFD 60 K + ++ ++ F AS G + G L G + F E A+G+ GFD Sbjct: 5 KKLILLGLVVSLVAFSGCTEDQASAKGSMTMTEGILVVGTDPTFPPFEEKNADGELVGFD 64 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + +IQ++ AL++++ D + T R + Sbjct: 65 IDLMNALGEKMG---IEIQFVEQPFDGIIPALKAEKFDCIISAVTITDDRAKEVAFTNS- 120 Query: 121 ITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 YFD I + SV L+G + Q GTT E Y A + + +E Sbjct: 121 --YFDAAQVIAVLIDDDSVQSVDDLAGKVVAAQLGTTGEYEAQHY--AEELGFEIKSYEV 176 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + + R +A D A + + +P + ++ + ++ A + E Sbjct: 177 MADAFIDMENGRVNAVVTDDGV--AQRFLDTKPGVYKVVGEPMTSESYGLAANLDNQELI 234 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVS 265 + ++ A+ +E G + + Sbjct: 235 DALN---NALAEVKEDGTYDEIYAEWF 258 >gi|126657821|ref|ZP_01728974.1| hypothetical protein CY0110_13191 [Cyanothece sp. CCY0110] gi|126620761|gb|EAZ91477.1| hypothetical protein CY0110_13191 [Cyanothece sp. CCY0110] Length = 299 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 51/277 (18%), Positives = 94/277 (33%), Gaps = 19/277 (6%) Query: 1 MYKDFF----VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K F V++L L S++ S+L I + G L+ GI V F NG+ Sbjct: 1 MKKSVFYLSFVNLLLLFSWVLPSYTQEMSVLEKIDQTGLLEVGIREDAVPFGYRDINGNL 60 Query: 57 KGFDVDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 +G +D L + +K ++ RF + +DI + E Sbjct: 61 EGLCLDLIALLREQLKQKLNKKVIALKLYKSTLYNRFELASDRIVDIECGPNTIREVPEY 120 Query: 113 SLGLAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 + + + G ++ K K I+ L I V TT E +A+ + N+ Sbjct: 121 QIQFSQ--PFFLTGTQLLVKTEKAKRINPNRSLDNIDIGVLRNTTNEQLMAERYPLANL- 177 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND---RPSEHVILPDIISKSPLA 227 A + ++ DA+ D L + P ++ + I Sbjct: 178 VQFQGVTGRSRGIQALQGNKIDAFASDGILLVGEAQIQNLRLGPDYTLVPTNPIDCEEYG 237 Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 + + EW + V+ + GI + ++ Sbjct: 238 LILPDNNPEWLSFVNSVID---DSSLQGIYRDWFGEI 271 >gi|16801415|ref|NP_471683.1| hypothetical protein lin2352 [Listeria innocua Clip11262] gi|16414875|emb|CAC97579.1| lin2352 [Listeria innocua Clip11262] Length = 486 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 52/278 (18%), Positives = 104/278 (37%), Gaps = 24/278 (8%) Query: 1 MYKDF---FVSILCLIILFFTSFST------NASILGDIKKRGFLKCGINTGLVGFAE-- 49 M K F +IL + I F+ F+T L I+++G L G++ + Sbjct: 1 MQKHVLQKFAAILLIFIFVFSGFTTVFAADTQDETLTKIQEKGVLTVGLSADYPPYEFHQ 60 Query: 50 -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + GFDV ++ + K+ +N +L++ +ID++ T Sbjct: 61 TIDGKDKVVGFDVSIAEKIAKDL---DVKLDIKEMNFDSLLGSLKTGKIDMIISGMSPTP 117 Query: 109 LREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 R+ + F Q ++ K K+ +SV+ +G + Q TT E + K Sbjct: 118 ERQKEVDF--SDPYMFVQQRVVIRKTDKEKFTSVNDFNGIKVGAQKQTTQE----ELAKN 171 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + ++V ++ ++++ DA + A + + I SK Sbjct: 172 ELVGSDVVSLQKVPDLILNLKSNKLDAVVLEGPVAEAYISQDKTLALADIKFVNGSKET- 230 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 A A+ +G T V+ + + L Q N++ Sbjct: 231 AIAMPKGSTALQEKVNASIKDIQDTGLLKKYQNEANKL 268 >gi|313617589|gb|EFR89902.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria innocua FSL S4-378] Length = 486 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 52/278 (18%), Positives = 104/278 (37%), Gaps = 24/278 (8%) Query: 1 MYKDF---FVSILCLIILFFTSFST------NASILGDIKKRGFLKCGINTGLVGFAE-- 49 M K F +IL + I F+ F+T L I+++G L G++ + Sbjct: 1 MQKHVLQKFAAILLIFIFVFSGFTTVFAADTQDETLTKIQEKGVLTVGLSADYPPYEFHQ 60 Query: 50 -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + GFDV ++ + K+ +N +L++ +ID++ T Sbjct: 61 TIDGKDKVVGFDVSIAEKIAKDL---DVKLDIKEMNFDSLLGSLKTGKIDMIISGMSPTP 117 Query: 109 LREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 R+ + F Q ++ K K+ +SV+ +G + Q TT E + K Sbjct: 118 ERQKEVDF--SDPYMFVQQRVVIRKTDKEKFTSVNDFNGIKVGAQKQTTQE----ELAKN 171 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + ++V ++ ++++ DA + A + + I SK Sbjct: 172 ELVGSDVVSLQKVPDLILNLKSNKLDAVVLEGPVAEAYISQDKTLALADIKFVNGSKET- 230 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 A A+ +G T V+ + + L Q N++ Sbjct: 231 AIAMPKGSTALQEKVNASIKDIQDTGLLKKYQNEANKL 268 >gi|257077632|ref|ZP_05571993.1| amino acid ABC transporter [Enterococcus faecalis JH1] gi|256985662|gb|EEU72964.1| amino acid ABC transporter [Enterococcus faecalis JH1] Length = 569 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 51/275 (18%), Positives = 92/275 (33%), Gaps = 16/275 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + F+ ++++ +F + S + KK G + F + G + G D Sbjct: 1 MKRKHFLLSFFVMMVTLLTFISGTSAHAEGKK---YTIGTDLTFAPFEFQDSKGKYIGID 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A++ ++ PL A+QSKQID + T R+ S F Sbjct: 58 VDLLDAIAKD---QGFEVDLKPLGFDSAVQAIQSKQIDGMIAGMSITDERKKS--FDFSD 112 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G + K I S L G ++ + GT + L Y F+ Sbjct: 113 PYFDSGLQLAVKKGNDKIKSYDDLKGKTVAAKVGTESANFLEKN--KEKYDYTIKNFDDA 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + A DA D L + ++ D + S A+ +G Sbjct: 171 TGLYKALENGEADAIVDDYPVLGYAV---KNGQKLQLVGDKETGSSYGFAVKKGQNP--E 225 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 ++ + + ++ G K +N + Q Sbjct: 226 LIKKFNAGLKNLKDNGTYDKILNNYLATGDETNTQ 260 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 43/260 (16%), Positives = 88/260 (33%), Gaps = 17/260 (6%) Query: 18 TSFSTNASILGDIK-KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 T+ + I K+ ++ F A GD+ G DVD + ++ + Sbjct: 257 TNTQDAGEQMKKITPKKEKYVIASDSTFAPFEFQNAQGDYVGIDVDLVKR-AAELQGFTV 315 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KK 135 + +++ ++ A++S Q D + T R+ + F + G + K Sbjct: 316 EFKFIGFSSA--VQAVESGQADGMVAGMTITDDRKKA--FDFSVPYFDSGIQIAVKKGND 371 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I S L G + V+ GT + L Y + + + +A DA Sbjct: 372 KIKSYDDLKGKKVGVKIGTESADFLEKN--KKKYDYSIKYLDTTDALYSALEIGEVDAM- 428 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEEL 254 D + + ++P I + A+ + + E + + M E Sbjct: 429 MDDYPVIGYGVAQNQPLATPIPREKGGS--YGFAVKKGQNPELLEMFNEGLKEMKRTGEY 486 Query: 255 ----GITQKNINQVSKDTTN 270 G K+ N+ ++T + Sbjct: 487 DKIIGTYVKDGNEAKEETAD 506 >gi|167463723|ref|ZP_02328812.1| cystine transporter subunit [Paenibacillus larvae subsp. larvae BRL-230010] gi|322383354|ref|ZP_08057144.1| ABC transporter-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321152354|gb|EFX45170.1| ABC transporter-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 288 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 40/251 (15%), Positives = 86/251 (34%), Gaps = 11/251 (4%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 N+ L IK+ G LK GI + + + GFD D + ++ + K +++ Sbjct: 48 NSRTLEQIKQSGVLKVGIMGIYAPYNFLNDKKEMDGFDADIAKEIAKKMG---LKAEFVS 104 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVS 141 LQ+ + D + T R+ + + I+ + I+ + Sbjct: 105 QEFSGMIAGLQAGKFDTVISQMTITEDRQKQMDFTE--PYITNQVKVIVKQDNNSITKLE 162 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 G +I V GT E L + + ++ V R DA ++ AL Sbjct: 163 DFKGKNIGVGLGTNDEAYLRNEALPKVGNFTIKTYDDVITSLQDLNNGRIDATINNMYAL 222 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 + + ++ + + A A+ +G+TE + ++ + G + Sbjct: 223 --KPIVEKNGFKIKVVGEAVKSDKAAIAVTKGNTELRDALNQALK---DLKADGTYKTIF 277 Query: 262 NQVSKDTTNPD 272 + + + Sbjct: 278 TKWFGEEPPAE 288 >gi|313892375|ref|ZP_07825967.1| putative glutamine ABC transporter, periplasmic glutamine-binding protein GlnH [Dialister microaerophilus UPII 345-E] gi|313119234|gb|EFR42434.1| putative glutamine ABC transporter, periplasmic glutamine-binding protein GlnH [Dialister microaerophilus UPII 345-E] Length = 260 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 53/274 (19%), Positives = 97/274 (35%), Gaps = 19/274 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG---FLKCGINTGLVGFAEVKANGDWK 57 M+ F +IL + + S K G ++ G T F V + + Sbjct: 1 MFGKKFKTILAIGAMAAALISAGCGS-DSTTKNGIPPVIRVGSETTFPPFEFVDGD-KYV 58 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D A+ + SK+++ + A+QS QID+++ D T R + + Sbjct: 59 GFDLDLAEAVIKQMG---SKMEFKSMGFDALIPAVQSGQIDMIAAGMDATPERAKQVAFS 115 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + I L G ++ Q G T + LA KA N+K + Sbjct: 116 DPYFSENGYVIVTRKDNDTIHDWKDLEGKNVGAQVG-TQSVELAQEAKAANVK----QLD 170 Query: 178 RVEEIDAAYRAHRCDAYTGDISA-LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + +A DA D +Y L D+ + I+ ++ A+ + + E Sbjct: 171 SNSQAFMELQASTLDAVVLDRPVTMYYLNQGADK--DLQIVGTPKPGPAMSLAVNKDNKE 228 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 + V+ + +E G K + + Sbjct: 229 LQDAVNKALKEI---KENGTYDKIYKKWFGEQQK 259 >gi|171320533|ref|ZP_02909559.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MEX-5] gi|171094226|gb|EDT39307.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MEX-5] Length = 266 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 49/255 (19%), Positives = 98/255 (38%), Gaps = 19/255 (7%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 S A +L +K+ G LK + F A G +GFDVD A+++ + P+ + Sbjct: 24 SHAADLLDTVKQAGVLKIALEGTYPPFDYRNAEGQLEGFDVDVATAVAARLGVKPA---F 80 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + LQ+ + D++ T R+ +L + + + + S+ Sbjct: 81 VTTEWSGILAGLQAGKFDVIVNQVAITPSRQQALDFSMPYVYSSAQLLQRQNDTRAFKSL 140 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 +L G + V G+ + L A +++ +P E + + A R DA D Sbjct: 141 DELKGKKVGVTMGS-NYVDLVKTVPAIDLQVYPGTPENLRD----LAAGRIDAAVNDRLM 195 Query: 201 LYALKLTND---RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 L L + RP + + + +G+ ++ + A+ + ++ G Sbjct: 196 LSYLIKNSHLPLRPGSVLAGGE----DRMGIPFRKGNPKFAKAIDD---AVASLQQDGTL 248 Query: 258 QK-NINQVSKDTTNP 271 +K ++ DTT P Sbjct: 249 KKISMQWFGTDTTRP 263 >gi|13474096|ref|NP_105664.1| amino acid ABC transporter, periplasmic binding protein [Mesorhizobium loti MAFF303099] gi|14024848|dbj|BAB51450.1| amino acid ABC transporter, periplasmic binding protein [Mesorhizobium loti MAFF303099] Length = 269 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 47/268 (17%), Positives = 90/268 (33%), Gaps = 18/268 (6%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 + +L L + + NA L DI K G + G+ F+ A+ KG+D+D + Sbjct: 14 ILVLGAAGLGIATQAANADALADITKAGTINVGVFADFPPFSSASADMSLKGYDMDVAQY 73 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 ++ + K+ + + + R L ++DIL +E + F Sbjct: 74 IADTL---KVKLNPVAVTGQNRIPYLNDHRVDIL---MSVGYSKEREQVIDFAAAYAPYY 127 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 I + L+ SI V GT + +L + A F+ + A+ Sbjct: 128 IAVIGPAAMSVKGKEDLADKSIAVNRGTLEDTSLTEAAPA---SADIKRFDNYNSVIQAF 184 Query: 187 RAHRCDAYTGDISALYALKLTND--RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + + + D +P + + SP + + + V+ Sbjct: 185 ISGQTQLMVVGNDVGAQVLAKQDVLKPEQ----KFQLLTSPSHIGLNKNEDGLKKAVNDA 240 Query: 245 HYAMVTAEELGITQKNINQVSKDTTNPD 272 M+ +L + K K NPD Sbjct: 241 IAKMLADGKLDESSK---AWLKTPLNPD 265 >gi|257126582|ref|YP_003164696.1| extracellular solute-binding protein family 3 [Leptotrichia buccalis C-1013-b] gi|257050521|gb|ACV39705.1| extracellular solute-binding protein family 3 [Leptotrichia buccalis C-1013-b] Length = 251 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 54/267 (20%), Positives = 102/267 (38%), Gaps = 17/267 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M I+ + + T S D KK+ GI+T F K + + G D Sbjct: 1 MKSKMLKMIMLVTVFMLTM--ACGSKSADGKKK--YTIGIDTSFPPFEY-KKDSKYTGID 55 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ +A+ + ++++ P++ ALQS Q+D + T R+ S+ Sbjct: 56 IELLQAIGK---LEGFEVEFKPMDFGGLIPALQSGQLDGVIAGASITEERKKSVDF--SD 110 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G +++K I +V L G + V+ GT D K K VFE Sbjct: 111 PYYESGLVALVNKGNSTIKTVKDLEGKRLVVKNGTAGAKFAEDNLKG---KATIRVFEDS 167 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 A ++ DA D + N I + ++ + + +G+ + Sbjct: 168 ASTLKAVENNQADAAFEDYPVIAYTIKVNPN-LNVKIGTEKLTNNEYGFMVKKGENK--E 224 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSK 266 ++ + + T +E G QK +++ +K Sbjct: 225 LLEKFNKGLKTLKENGEYQKIVDKYTK 251 >gi|307155069|ref|YP_003890453.1| polar amino acid ABC transporter inner membrane subunit [Cyanothece sp. PCC 7822] gi|306985297|gb|ADN17178.1| polar amino acid ABC transporter, inner membrane subunit [Cyanothece sp. PCC 7822] Length = 511 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 42/246 (17%), Positives = 72/246 (29%), Gaps = 19/246 (7%) Query: 31 KKRGF-LKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 + G F G+ GFD++ +A+ KI + L Sbjct: 36 QDTGKAFTVATEPAFPPFEMTDQKTGELTGFDLELMKAIGQEAG---LKITFESLPFDGI 92 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGAS 147 ALQ+ + T R +L + + G + K I S L G Sbjct: 93 IPALQAGTVKAAISGMTITPERAQTLSFSR--PYFKAGLAIAVRKDNNSIKSFDDLKGKK 150 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 I VQ GTT A A +F+ + DA D Sbjct: 151 IAVQIGTTGAKQAAQIEGA-----EISIFDSAVLALQELVNGKVDAVVNDAPVTLYAIKK 205 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 P V+ +++++ A+ + + + + E G Q + Sbjct: 206 AGLPGVKVV-GELLTEEYYGIALPKNSP----YLKQINDGIARLLENGTYQSIYEKWFG- 259 Query: 268 TTNPDV 273 T P++ Sbjct: 260 TQPPEL 265 >gi|15807591|ref|NP_296329.1| amino acid ABC transporter periplasmic amino acid-binding protein [Deinococcus radiodurans R1] gi|6460438|gb|AAF12147.1|AE002090_3 amino acid ABC transporter, periplasmic amino acid-binding protein [Deinococcus radiodurans R1] Length = 253 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 44/255 (17%), Positives = 90/255 (35%), Gaps = 15/255 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 VS L L +L F + + L IKK G L F + GF+ + Sbjct: 6 VSTLALAMLAFGAPAAARD-LTSIKKSGTLVVATEPTYPPFTYTQGK-KIVGFEAELAEL 63 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + K+++ + + L + D++ + T R+ ++ + ++ Sbjct: 64 LAKQLG---VKVEWKSSSFDTLLIGLGQGRYDMVIASHGITPERQKAVDFSN---PHYCS 117 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 G ++ K G +++ + G + VQ GTT N++ +P + A Sbjct: 118 GGVLVSKPGGPKTLADMKGKKLAVQLGTTYATRARSLPGLGNIQTYP----NNTDALQAL 173 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 A R DAY D AL+ + I ++ + + A + + + V+ Sbjct: 174 MAGRTDAYLTDR--FVALEARKKTGGKLQI-GALVFQEKIGIAFQKDNKSLTSAVNAALK 230 Query: 247 AMVTAEELGITQKNI 261 + + Sbjct: 231 KVQADGSYKKLSEKY 245 >gi|168179725|ref|ZP_02614389.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum NCTC 2916] gi|182669265|gb|EDT81241.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum NCTC 2916] Length = 272 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 49/286 (17%), Positives = 100/286 (34%), Gaps = 33/286 (11%) Query: 1 MYKDFF-------VSILCLIILFF----TSFSTNASILGDIKKRGFLKCGINTGLVGFAE 49 M K +S+ +I L T+ + S + IK+ G L G + Sbjct: 1 MSKKILGKLGAIIISLTMVISLVACGKNTAGNEEESKVDKIKESGKLVVGTCADYPPYEF 60 Query: 50 ---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 + + GFD+ + ++ + K++ + ALQS +DI+ + Sbjct: 61 HKTINGKDEIVGFDITIAKEIAKDLG---VKLEIKDMKFDGLLAALQSGNVDIVIAGMNP 117 Query: 107 TLLREISLGLAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYF 164 T R+ S+ I Y Q ++ K S+ + G I VQ GTT E + Sbjct: 118 TEDRKKSVDF--SKIYYQAIQSVVVRAEDKDKFKSLEEFKGKKIGVQKGTTQE----EVA 171 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 K +V ++ + + D + + + I + K Sbjct: 172 KKEMTNSEIKSLGKVTDLVLELQNKKVDGLVLENPVAVSYAKNGKNLAVSNIKFENKDK- 230 Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 + A+ +G+ + + + T ++ +K+I++ D + Sbjct: 231 GASVAVKKGNKDLVDAIDKTLDKLIK-------EKSIDKFVTDASK 269 >gi|315029877|gb|EFT41809.1| ABC transporter, permease protein [Enterococcus faecalis TX4000] Length = 722 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 51/275 (18%), Positives = 92/275 (33%), Gaps = 16/275 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + F+ ++++ +F + S + KK G + F + G + G D Sbjct: 1 MKRKHFLLSFFVMMVTLLTFISGTSAHAEGKK---YTIGTDLTFTPFEFQDSKGKYIGID 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A++ ++ PL A+QSKQID + T R+ S F Sbjct: 58 VDLLDAIAKD---QGFEVDLKPLGFDSAVQAIQSKQIDGMIAGMSITDERKKS--FDFSD 112 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G + K I S L G ++ + GT + L Y F+ Sbjct: 113 PYFDSGLQLAVKKGNDKIKSYDDLKGKTVAAKVGTESANFLEKN--KEKYDYTIKNFDDA 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + A DA D L + ++ D + S A+ +G Sbjct: 171 TGLYKALENGEADAIVDDYPVLGYAV---KNGQKLQLVGDKETGSSYGFAVKKGQNP--E 225 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 ++ + + ++ G K +N + Q Sbjct: 226 LIKKFNAGLKNLKDNGTYDKILNNYLATGDETNTQ 260 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 43/260 (16%), Positives = 88/260 (33%), Gaps = 17/260 (6%) Query: 18 TSFSTNASILGDIK-KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 T+ + I K+ ++ F A GD+ G DVD + ++ + Sbjct: 257 TNTQDAGEQMKKITPKKEKYVIASDSTFAPFEFQNAQGDYVGIDVDLVKR-AAELQGFTV 315 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KK 135 + +++ ++ A++S Q D + T R+ + F + G + K Sbjct: 316 EFKFIGFSSA--VQAVESGQADGMVAGMTITDDRKKA--FDFSVPYFDSGIQIAVKKGND 371 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I S L G + V+ GT + L Y + + + +A DA Sbjct: 372 KIKSYDDLKGKKVGVKIGTESADFLEKN--KKKYDYSIKYLDTTDALYSALEIGEVDAM- 428 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEEL 254 D + + ++P I + A+ + + E + + M E Sbjct: 429 MDDYPVIGYGVAQNQPLATPIPREKGGS--YGFAVKKGQNPELLEMFNEGLKEMKRTGEY 486 Query: 255 ----GITQKNINQVSKDTTN 270 G K+ N+ ++T + Sbjct: 487 DKIIGTYVKDGNEAKEETAD 506 >gi|261365992|ref|ZP_05978875.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria mucosa ATCC 25996] gi|288565423|gb|EFC86983.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria mucosa ATCC 25996] Length = 276 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 45/233 (19%), Positives = 82/233 (35%), Gaps = 10/233 (4%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K + N F + + G+ +GFDVD A++ A K+++ F Sbjct: 34 KADKVYRVAANAEFAPFESLDSAGNVEGFDVDLMNAMAKA---GGFKVEFKHQPWDSLFP 90 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG-ASIC 149 AL++ DI+ T R+ S+ + Q ++ K K ++S L A + Sbjct: 91 ALKNGDTDIVISGVTITDERKQSMDF--TDPYFEITQVVLVPKGKKVASSDDLKNMAKVG 148 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V G T + +++ N FE V + DA D + + N Sbjct: 149 VVTGQTGDFSVSKLLG--NDNPKIARFESVPLVIKELENGGVDAVVSDSAVIANYVKNNP 206 Query: 210 RPS-EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 S + + LPD + A +GD +++ + + E Sbjct: 207 TKSMDFITLPD-FTIENYGIAARKGDEATIKMLNEALKKVRDSGEYDKIHAKY 258 >gi|126649374|ref|ZP_01721615.1| amino acid ABC transporter (substrate-binding protein) [Bacillus sp. B14905] gi|126593699|gb|EAZ87622.1| amino acid ABC transporter (substrate-binding protein) [Bacillus sp. B14905] Length = 264 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 41/262 (15%), Positives = 86/262 (32%), Gaps = 15/262 (5%) Query: 1 MYKD--FFVSILCLIILFFTSF-----STNASI-LGDIKKRGFLKCGINTGLVGFAEVKA 52 M K + ++ + L +++ S D + K G F V Sbjct: 1 MKKTAWMLLMMIAALTLALAGCGTKDNASSGSTPSEDADGKKVYKVGTEATFAPFESVDD 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G G DVD +A++ + ++++ + + F +++ + I + T R+ Sbjct: 61 KGKIVGIDVDILKAIADEM---NFEVEWNNIGWEPVFQTIKNGETHIGASGITITDERKE 117 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 S Y ++ + I S+ +L + VQ T + + + Sbjct: 118 SFDFTE--PYYESQLLIVVKEDSKIKSLDELKDKKVSVQINATGHMAAKKLQGEAST--N 173 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + FE DA GD + +Y + VI D K + + Sbjct: 174 IMAFESQPIAIQEMLNGNVDAAIGDNAVVYEYIKAHPDQKIKVIQDDAFEKEYYGFMVQK 233 Query: 233 GDTEWYNIVSWTHYAMVTAEEL 254 G+ E + ++ + +L Sbjct: 234 GNKELLDKLNEGLKKIKENGKL 255 >gi|146311037|ref|YP_001176111.1| cationic amino acid ABC transporter, periplasmic binding protein [Enterobacter sp. 638] gi|145317913|gb|ABP60060.1| L-arginine-binding protein [Enterobacter sp. 638] Length = 243 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 54/266 (20%), Positives = 94/266 (35%), Gaps = 26/266 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L I L T+ T ++ F + AN GFD Sbjct: 1 MKKVLIAALLASISLSATAAQT-------------IRFATEASYPPFESIDANNKIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL I + + + +L+ K+ID + D T RE + + Sbjct: 48 VDLANALCKEIDATCT---FANQSFDSLIPSLKFKRIDAVMAGMDITPEREKQVLFS--- 101 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+D + +K +S+ L G + VQ GTT + + D + + + ++ + Sbjct: 102 TPYYDNSALFIGQKGKFASIDLLKGKKVGVQNGTTHQKFIMD----KHPEITTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R DA GD + + ND+ P + + L A+ QG+TE Sbjct: 158 NAKLDLQNGRIDAVFGDTAVVTEWLKANDKLAPVGDKVTDKDYFGTGLGIAVRQGNTELQ 217 Query: 239 NIVSWTHYAMVTAEE-LGITQKNINQ 263 + + I K + Sbjct: 218 QKFNAALEKVKKDGTYETIYAKWFQK 243 >gi|311280246|ref|YP_003942477.1| cationic amino acid ABC transporter, periplasmic binding protein [Enterobacter cloacae SCF1] gi|308749441|gb|ADO49193.1| cationic amino acid ABC transporter, periplasmic binding protein [Enterobacter cloacae SCF1] Length = 243 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 54/268 (20%), Positives = 99/268 (36%), Gaps = 30/268 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L + L T+ T ++ F + A+ GFD Sbjct: 1 MKKVLIAALLASVSLSATAAET-------------IRFATEASYPPFESMDASNKIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL I + + +L+ ++ID + D T RE + + Sbjct: 48 VDLANALCKEIDATCT---FTNQAFDSLIPSLKFRRIDAVMAGMDITPEREKQVLFSK-- 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+D + +K +++ QL G + VQ GTT + + D + + + ++ + Sbjct: 103 -PYYDNSALFIGQKGKYATIDQLKGKKVGVQNGTTHQKFITD----KHPEITTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR---PSEHVILPDIISKSPLAPAIIQGDTEW 237 + R DA GD + + +ND+ + V D L A+ QG+TE Sbjct: 158 NAKLDLQNGRIDAVFGDTAVVTEWLKSNDKLASVGDKVTDKDYFGT-GLGIAVRQGNTEL 216 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVS 265 + A+ ++ G Q N+ Sbjct: 217 QQKFN---AALDKVKQDGTYQTIYNKWF 241 >gi|322806287|emb|CBZ03855.1| amino acid ABC transporter, amino acid-binding/permease protein [Clostridium botulinum H04402 065] Length = 272 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 46/284 (16%), Positives = 96/284 (33%), Gaps = 29/284 (10%) Query: 1 MYKDFF-------VSILCLIILFF----TSFSTNASILGDIKKRGFLKCGINTGLVGFAE 49 M K +S+ +I L T+ + S + IK+ G L G + Sbjct: 1 MSKKILGKLGAIIISLTMVISLVACGKNTAGNEEKSKVDKIKESGKLVVGTCADYPPYEF 60 Query: 50 ---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 + + GFD+ + ++ + K++ + ALQS +DI+ + Sbjct: 61 HKTINGKDEIVGFDITIAKEIAKDLG---VKLEIKDMKFDGLLAALQSGNVDIVIAGMNP 117 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T R+ S+ + K S+ + G I VQ GTT E + K Sbjct: 118 TEDRKKSVDFSKIYYQAIQSVVVGAEDKDKFKSLEEFKGKKIGVQKGTTQE----EVAKK 173 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 +V ++ + + D + + + I + K Sbjct: 174 EMTNSEIKSLGKVTDLVLELQNKKVDGLVLENPVAVSYAKNGKNLAVSNIKFENKDK-GA 232 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 + A+ +G+ + + + T ++ +K+I++ D + Sbjct: 233 SVAVKKGNKDLVDAIDKTLDKLIK-------EKSIDKFVTDASK 269 >gi|323144241|ref|ZP_08078872.1| putative glutamine ABC transporter, periplasmic glutamine-binding protein GlnH [Succinatimonas hippei YIT 12066] gi|322415993|gb|EFY06696.1| putative glutamine ABC transporter, periplasmic glutamine-binding protein GlnH [Succinatimonas hippei YIT 12066] Length = 254 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 49/258 (18%), Positives = 80/258 (31%), Gaps = 27/258 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V C + L S A L K G + F V + G GFD Sbjct: 8 MKK---VFAACALALSAFCVSAQADTL---------KVGSHPTFAPFEFVDSEGKAIGFD 55 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A++ A + ++ + + AL + QID + T R+ + Sbjct: 56 IDLINAIAKA---NGDTVEIVSMPFDGLIPALVTNQIDAIISGMTITDARKERVEFTDG- 111 Query: 121 ITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y Q ++ K V L G IC Q GTT + A + I Sbjct: 112 -YYKSIQSVLIRKADAEKFKKVEDLKGQKICTQIGTTGDKF------ARTLSEDVIAMNN 164 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD--IISKSPLAPAIIQGDTE 236 + R C A D L + + D ++ A+ + + Sbjct: 165 EPDALMELRNGGCAALINDRPTNLYYLLQSKATEIGELKDDSLYLNPEFYGIAVNKNNKA 224 Query: 237 WYNIVSWTHYAMVTAEEL 254 ++ + + EL Sbjct: 225 LVKRLNAGLEKIAASGEL 242 >gi|289167584|ref|YP_003445853.1| ABC transporter substrate-binding lipoprotein [Streptococcus mitis B6] gi|288907151|emb|CBJ21985.1| ABC transporter substrate-binding lipoprotein [Streptococcus mitis B6] Length = 271 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 44/276 (15%), Positives = 93/276 (33%), Gaps = 23/276 (8%) Query: 1 MYKDFFVSILCLIILFF------TSFSTNASILGDIKKRGFLKCGINTGLVGF---AEVK 51 M ++ +LC + F + + + S + IK++G L + F + V Sbjct: 1 MKSKKWIFVLCSFLATFFLVACQSGSNGSQSAVEAIKQKGKLVVATSPDYAPFEFQSLVD 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G D+D +A++ + K++ ++ +LQ+ + D+ T R Sbjct: 61 GKNQVVGADIDMAQAIADELG---VKLEISSMSFDNVLTSLQTGKADLAVAGISATDER- 116 Query: 112 ISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 F Y + F++ K ++ L A+I Q GT E + + Sbjct: 117 -KEVFDFSIPYYENKISFLVRKADVEKYKDLTSLESANIAAQKGTVPESMVKEQLPKAQ- 174 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + E +A + DA D + N + + + A A Sbjct: 175 ---LTSLTNMGEAVNELQAGKVDAVHMDEPVALSYAAKNADLAVATVSLKMKDGEANAVA 231 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 + + + +V ++ G QK + + + Sbjct: 232 LRKNSADLKEVVDKVIQ---KLKDDGTYQKYLEKAA 264 >gi|191638265|ref|YP_001987431.1| Glutamine ABC transporter, substrate binding protein [Lactobacillus casei BL23] gi|239631650|ref|ZP_04674681.1| ABC-type amino acid transport/signal transduction system [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301066314|ref|YP_003788337.1| amino acid ABC transporter/signal transduction system periplasmic protein [Lactobacillus casei str. Zhang] gi|190712567|emb|CAQ66573.1| Glutamine ABC transporter, substrate binding protein [Lactobacillus casei BL23] gi|239526115|gb|EEQ65116.1| ABC-type amino acid transport/signal transduction system [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300438721|gb|ADK18487.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus casei str. Zhang] gi|327382298|gb|AEA53774.1| Extracellular solute-binding protein family 3 [Lactobacillus casei LC2W] gi|327385493|gb|AEA56967.1| Extracellular solute-binding protein family 3 [Lactobacillus casei BD-II] Length = 270 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 37/234 (15%), Positives = 82/234 (35%), Gaps = 8/234 (3%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 I++ + G++ V + NG G+D+D +A+ + + ++ + Sbjct: 34 RIERTKKVVIGLDDTFVPMGFRQKNGQLAGYDIDLAKAVFKRYG---INVDFQTIDWSMK 90 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 L+++ ID++ T R+ + + + Q + K I ++ ++G ++ Sbjct: 91 ETELKNQTIDLIWNGYSVTPERKEKVAFSDN--YLINHQILVTKTKSNIKTIKDMAGKTL 148 Query: 149 CVQAGTTTELTLA---DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 VQ G++ L K PI+++ + A R D Sbjct: 149 GVQTGSSGAFDLDAQPKLLKNFIANKTPILYDTFNDAFIDLDAGRIQGILMDEVYARYYI 208 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 PS + I D A + + D + ++ A+ + QK Sbjct: 209 AHKPDPSSYRIASDDFPPENFAVGMRKSDNVLRSKINAGLKALKADGTVAKLQK 262 >gi|159030704|emb|CAO88377.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 285 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 54/273 (19%), Positives = 109/273 (39%), Gaps = 15/273 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K ++++ L +F T + + ++L IK+ G L+ + + F +N + +G + Sbjct: 1 MKLIILTLVILSNVFATLPAKSETVLEKIKRTGLLEVAMREDAIPFGYRDSNNNLQGLCL 60 Query: 62 DFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 DF + L + + ++ RF L++K +D + I G++ Sbjct: 61 DFIQLLREELKHKLNLQIISVKIYKSTLFNRFQLLENKTVDFECGPNSI--RKNIPDGVS 118 Query: 118 FRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F + G F++ + S L G SI V TTT+ L + + V Sbjct: 119 FSRPFFVTGTQFLVRSDNQNNFNFSSSLEGISIGVLRDTTTQELLRQKYPLATYQEFQGV 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALY--ALKLTNDRPSEHVILP-DIISKSPLAPAIIQ 232 R+ + R +R DA+ D L A+ L ++ ++P + ++ + Sbjct: 179 TGRLR-GIQSLRRNRIDAFASDGILLIGEAVILGLSLEQDYQLIPRNPLNCDYYGFILPA 237 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 D +W ++ VT+E I +K +V+ Sbjct: 238 NDLQWQEFINGVI---VTSENRNIFKKWFTEVA 267 >gi|315650943|ref|ZP_07903983.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Eubacterium saburreum DSM 3986] gi|315486789|gb|EFU77131.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Eubacterium saburreum DSM 3986] Length = 279 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 44/285 (15%), Positives = 85/285 (29%), Gaps = 25/285 (8%) Query: 1 MYKDFFVSILCLIILF----------------FTSFSTNASILGDIKKRGFLKCGINTGL 44 M K + +L ++L + ++ + D + G + Sbjct: 1 MKKIYLFGVLAALMLAGCSTAKTTESTSASQETSKTASESGKAADADNKNTFTVGFDQDF 60 Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 V +G + GFD+D ++ + + I+Y P+ + + L S ID + Sbjct: 61 PPMGFVGDDGQFTGFDLDLAAEVAKRLGKE---IKYQPIAWDAKDMELSSGTIDCIWNGF 117 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164 + + + Q F++ I S+ L+G + VQA ++ E L Sbjct: 118 SI---QGREDKYTWSKPYMKNDQVFVVKSGSNIDSIEDLAGKKVEVQADSSAEAALKADP 174 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 DA D S + ++T S +L ++ Sbjct: 175 DMVKTFDSLQTVADYNTGFMDLDMGGVDAIAMD-SVVANYQITKRGGSGFTVLDTPLASE 233 Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 G+ + V M L + KD T Sbjct: 234 EYGIGFKLGNESLRDEVQAKLDEMKADGSLKTISE--KWFGKDVT 276 >gi|294101063|ref|YP_003552921.1| extracellular solute-binding protein family 3 [Aminobacterium colombiense DSM 12261] gi|293616043|gb|ADE56197.1| extracellular solute-binding protein family 3 [Aminobacterium colombiense DSM 12261] Length = 251 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 39/254 (15%), Positives = 90/254 (35%), Gaps = 19/254 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + C+ ++ S A + GI+ ++ + +G GFD Sbjct: 1 MKKIGVLLLCCIFVVLGASNVLAAD-------KKTYIVGIDGDYYPYSFIGQDGKPAGFD 53 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ + ++ + + ++ P+ AL +K+ID++ + R + Sbjct: 54 VESIQWIAKEMGFE---VKVQPMAWDGIIPALLAKKIDMVYSGMTASPERREVVAF--SK 108 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTELTLADYFKAHN--MKYHPIVFE 177 + + Q + + + G +I Q G T + L DY + +++ Sbjct: 109 VYWIINQAVCVRNNTDTNMGNLFDGKHTIGTQRGCTAAMWLEDYVVKTGIIPSQNLKLYD 168 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 R DA D + + I+ I + A A+ + D E Sbjct: 169 NFPLAAKDLENGRIDAAMMDDVIVA----KAVEGKDMKIIGTISTGEEYAVAMRKEDKEL 224 Query: 238 YNIVSWTHYAMVTA 251 +++++ ++T+ Sbjct: 225 HDLINEGLDRLMTS 238 >gi|241762841|ref|ZP_04760904.1| extracellular solute-binding protein family 3 [Acidovorax delafieldii 2AN] gi|241368016|gb|EER62221.1| extracellular solute-binding protein family 3 [Acidovorax delafieldii 2AN] Length = 265 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 34/232 (14%), Positives = 72/232 (31%), Gaps = 10/232 (4%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 + G++ GFD+D + + + ++++ P++ + L Sbjct: 39 KIVVGLDDNFPPMGFRDDKNQLVGFDIDMAKEAAKRLG---LEVEFKPIDWSAKEAELSG 95 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 K++D L T R +AF + Q ++ I + + L+G + Q G+ Sbjct: 96 KRVDALWNGLTITEER--KQNIAFTAPYMENHQIIVVPAGSAIKTKADLAGKVVGAQEGS 153 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 + + F R +A D + +P + Sbjct: 154 SAVDAIKKEDAVFKSFKEFKTFGDNVTALMDLTTGRLEAVVVD--EVVGRYYVAKKPDAY 211 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 +L D + + DTE + + A+ + G K Q Sbjct: 212 AVLGDNFGTEEYGVGLRKDDTELHGKLE---KALADMKADGAAAKIAEQWFG 260 >gi|329121306|ref|ZP_08249932.1| arginine ABC superfamily ATP binding cassette transporter, binding protein [Dialister micraerophilus DSM 19965] gi|327469715|gb|EGF15181.1| arginine ABC superfamily ATP binding cassette transporter, binding protein [Dialister micraerophilus DSM 19965] Length = 260 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 53/274 (19%), Positives = 98/274 (35%), Gaps = 19/274 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG---FLKCGINTGLVGFAEVKANGDWK 57 M+ F +IL + + S K G ++ G T F V + + Sbjct: 1 MFGKKFKTILAIGAMAAALISAGCGS-DSTTKNGIPPVIRVGSETTFPPFEFVDGD-KYV 58 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D A+ + SK+++ + A+QS QID+++ D T R + + Sbjct: 59 GFDLDLAEAVIKQMG---SKMEFKSMGFDALIPAVQSGQIDMIAAGMDATPERAKQVAFS 115 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + I L G ++ Q GT + + LA KA N+K + Sbjct: 116 DPYFSENGYVIVTRKDNDTIHDWKDLEGKNVGAQVGTKS-VELAQEAKAANVK----QLD 170 Query: 178 RVEEIDAAYRAHRCDAYTGDISA-LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + +A DA D +Y L D+ + I+ ++ A+ + + E Sbjct: 171 SNSQAFMELQASTLDAVVLDRPVTMYYLNQGADK--DLQIVGTPKPGPAMSLAVNKDNKE 228 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 + V+ + +E G K + + Sbjct: 229 LQDAVNKALKEI---KENGTYDKIYKKWFGEQQK 259 >gi|299536213|ref|ZP_07049526.1| histidine-binding protein precursor (Hbp) [Lysinibacillus fusiformis ZC1] gi|298728199|gb|EFI68761.1| histidine-binding protein precursor (Hbp) [Lysinibacillus fusiformis ZC1] Length = 265 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 42/263 (15%), Positives = 84/263 (31%), Gaps = 16/263 (6%) Query: 1 MYKD--FFVSILCLIILFFTSFSTNASILGDIKK-------RGFLKCGINTGLVGFAEVK 51 M K + I+ + L T + K G F V Sbjct: 1 MKKTGWMLLMIIAALTLALAGCGTKDDASSGSSSSEDGGDGKKVYKVGTEATFAPFESVD 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 +G G DVD +A++ + ++++ + + F +++ + DI + T R+ Sbjct: 61 DSGKIVGIDVDILQAIADEM---DFEVEWNNIGWEPVFQTIKNGETDIGASGITITEERK 117 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 S Y ++ + I S+ +L + VQ T + + Sbjct: 118 ESFDFTE--PYYESQLLIVVKEDSKIKSLDELKDKKVSVQINATGHMAAKKLQGEAST-- 173 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + + FE DA GD + +Y + VI D K + Sbjct: 174 NIMAFESQPIAIQEMLNGNVDAAIGDNAVVYEYIKAHPDQKLKVIEDDAFEKEYYGFMVQ 233 Query: 232 QGDTEWYNIVSWTHYAMVTAEEL 254 +G+ E + ++ + +L Sbjct: 234 KGNKELLDKLNEGLKKIKENGKL 256 >gi|77457194|ref|YP_346699.1| lysine-arginine-ornithine-binding periplasmic protein [Pseudomonas fluorescens Pf0-1] gi|77381197|gb|ABA72710.1| L-ornithine-binding protein / L-arginine-binding protein [Pseudomonas fluorescens Pf0-1] Length = 258 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 57/272 (20%), Positives = 95/272 (34%), Gaps = 24/272 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ L L +L +S L + GI FA G+ GFD Sbjct: 1 MKKFPLITGLALSLLACSSAFAAEKTL---------RIGIEAAYPPFASKTDKGEIVGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D AL + + K ++ +L+ K+ID+ + R+ S+ + Sbjct: 52 YDIGNALCAQM---QVKCVWVEGEFDGLIPSLKVKKIDMALSSMTINEDRKKSVDFTHK- 107 Query: 121 ITYFDGQGFIMHKKKGISS-VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 YF +M + + + L G ++ VQ TTT+ + F+ + + Sbjct: 108 -YYFTSSRLVMKEGASVDDQYASLKGKTVGVQRATTTDRYATEVFEPKGINVK--RYGNN 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK----SPLAPAIIQGDT 235 EEI A R DA D L + P++ A+ +G+T Sbjct: 165 EEIYMDLAAGRLDAIFADTIPLTDFLSMPRGKGYAFVGPELKDPKYVGEGAGIAVRKGNT 224 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 E VS + A+ G QK + K Sbjct: 225 EL---VSQLNTAIDGIRASGEYQKISEKYFKS 253 >gi|319792887|ref|YP_004154527.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] gi|315595350|gb|ADU36416.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] Length = 270 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 37/233 (15%), Positives = 69/233 (29%), Gaps = 15/233 (6%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L G + F G+ GFD+D +A++ +++++ + F +L Sbjct: 45 VLVVGTDAAYAPFESQNEKGEVVGFDIDVVKAVAQKAG---IEVKFVNTPWEGIFNSLDQ 101 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 D+L + T R ++ P + Q + ++ + + VQ GT Sbjct: 102 GDRDLLVSSITITDERRQTMDF--SPPYFEARQLIAVKSDSPVAKFDDIKTLKVGVQNGT 159 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T + + N FE A A D + N Sbjct: 160 TGDEVVGKLLGKSNTAIK--RFESTPLALKELEAGGVQAVVADNGVVAHYLANNAGGGFK 217 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTH--------YAMVTAEELGITQK 259 + A+ +G+ E + YA + A G K Sbjct: 218 TVSDAGFPSEQYGIAVKKGNAELLAKIDKGLADIKADGTYAKIYASHFGAASK 270 >gi|302023815|ref|ZP_07249026.1| extracellular amino acid-binding protein [Streptococcus suis 05HAS68] gi|330832845|ref|YP_004401670.1| amino acid ABC transporter periplasmic protein [Streptococcus suis ST3] gi|329307068|gb|AEB81484.1| amino acid ABC transporter periplasmic protein [Streptococcus suis ST3] Length = 266 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 92/259 (35%), Gaps = 12/259 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI--LGDIKKRGFLKCGINTGLVGFAE---VKANGD 55 M K ++ L L + S+ +S L IK++G L + F V + Sbjct: 1 MKKILALAATVLAGLTLAACSSTSSQSALDKIKEKGTLVVATSPDYAPFEFQALVDGKNE 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G D+ + ++ + K++ ++ ++Q+ + DI ++ R Sbjct: 61 VVGADIMLAQKIADELG---VKLEVSAMSFDNVLSSVQNGKADIAIAGLSYSEERAKVFD 117 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + D ++S+ +SG ++ VQ G+T E + N+ ++ Sbjct: 118 FSESYYQISDVLLIKKDSANSLTSIDAMSGKTLAVQKGSTQESYAQENISQANLISLTLM 177 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 E V E ++ + DA D N + + I ++ A+ +G T Sbjct: 178 GEAVNE----LKSGKVDAILMDSPVAAGYVSQNSDLAVASVEFPTIDENSKVIALPKGST 233 Query: 236 EWYNIVSWTHYAMVTAEEL 254 E + + ++E Sbjct: 234 ELKTAIDKVIAEVKASDEF 252 >gi|292899027|ref|YP_003538396.1| arginine ABC transporter substrate-binding protein [Erwinia amylovora ATCC 49946] gi|291198875|emb|CBJ45985.1| arginine ABC transporter, substrate-binding protein [Erwinia amylovora ATCC 49946] Length = 248 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 54/266 (20%), Positives = 92/266 (34%), Gaps = 26/266 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K I+ +L S S AS ++ F + AN +GFD Sbjct: 6 MKK-----IVIAALLAGYSLSAGASQ--------TIRFAAEASYPPFEFIDANNKIQGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL I D + + +L+ ++ D + D T RE + Sbjct: 53 VDLANALCREIDADCT---FTNQAFDSLIPSLKFRRFDAVMSGMDITPEREKQVLFTQA- 108 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+D + +K ++SV L G + VQ GTT + +A+ + ++ + Sbjct: 109 --YYDNSALFITQKGKVASVDALKGKRVGVQNGTTHQKYIAEKLPE----VKVVPYDSYQ 162 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R DA GD + + N P + S L A+ QG++E Sbjct: 163 NAILDLKNGRLDAVFGDTAVVNEWLKKNPELAPLGEKVTDKSYFGSGLGIAVRQGNSELQ 222 Query: 239 NIVSWTHYAMVTAEEL-GITQKNINQ 263 ++ + + K Q Sbjct: 223 GKLNAALDKVKANGSYQALYSKWFQQ 248 >gi|295838853|ref|ZP_06825786.1| amino acid ABC transporter, amino acid-binding protein [Streptomyces sp. SPB74] gi|295827222|gb|EDY42336.2| amino acid ABC transporter, amino acid-binding protein [Streptomyces sp. SPB74] Length = 347 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 43/251 (17%), Positives = 92/251 (36%), Gaps = 29/251 (11%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQ 79 + + + + IK+RG L G++ +A G + +GFD+D R ++ I K++ Sbjct: 64 AKDGAAIAAIKERGELLVGVDQNSYRWAYRGTYGSEPEGFDIDLARRVAKEILGAADKVR 123 Query: 80 YLPLNAKERFLALQSKQ---------------IDILSRNTDWTLLREISLGLAFRPITYF 124 + ++ +R AL + +D++ T R IS +AF + Sbjct: 124 FKTVSTADRGPALGRDEKDKGKPLAERDAKASVDMIISTMSITC-RHISNDIAFSTPYFE 182 Query: 125 DGQGFIMHKKKGISSVS-QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 Q ++ + + L G+ +C G+T E LA + A+ +K V +++ Sbjct: 183 TRQTLVVPRDSPVKGFGPTLGGSRLCAATGSTAEAFLARHGGAYGLKPVTKVPSQLD-CL 241 Query: 184 AAYRAHRCDAYTGDISALY-------ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + D D + +++ ++ + LP A+ + Sbjct: 242 VRLQLGTVDGLVTDGALAASQLAQDPGVRIADENEGDAARLP---MPEFYGVAMRDDSPD 298 Query: 237 WYNIVSWTHYA 247 V+ Sbjct: 299 LVGRVNQILDG 309 >gi|116494753|ref|YP_806487.1| amino acid ABC transporter periplasmic protein [Lactobacillus casei ATCC 334] gi|116104903|gb|ABJ70045.1| amino acid ABC transporter substrate-binding protein, PAAT family [Lactobacillus casei ATCC 334] Length = 270 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 37/234 (15%), Positives = 82/234 (35%), Gaps = 8/234 (3%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 I++ + G++ V + NG G+D+D +A+ + + ++ + Sbjct: 34 RIERTKKVVIGLDDTFVPMGFRQKNGQLAGYDIDLAKAVFKRYG---INVDFQTIDWSMK 90 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 L+++ ID++ T R+ + + + Q + K I ++ ++G ++ Sbjct: 91 ETELKNQTIDLIWNGYSVTPERKEKVAFSDN--YLINHQILVTKTKSNIKTIKDMAGKTL 148 Query: 149 CVQAGTTTELTLA---DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 VQ G++ L K PI+++ + A R D Sbjct: 149 GVQTGSSGAFDLDAQPKLLKNFIANKTPILYDTFNDAFIDLDAGRIQGILMDEVYARYYI 208 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 PS + I D A + + D + ++ A+ + QK Sbjct: 209 AHKPDPSSYRIASDDFPPENFAVGMRKSDNVLRSKINAGLKALKADGTVAKLQK 262 >gi|260893884|ref|YP_003239981.1| extracellular solute-binding protein family 3 [Ammonifex degensii KC4] gi|260866025|gb|ACX53131.1| extracellular solute-binding protein family 3 [Ammonifex degensii KC4] Length = 271 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 41/276 (14%), Positives = 87/276 (31%), Gaps = 21/276 (7%) Query: 1 MYK---DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDW 56 M + + ++ + +F + ++S ++ F G Sbjct: 1 MKRFWSRLCIGLVLVTAIFLSGCGASSSKTTAESQKPKYVVATEASFAPFEFRDDKTGQI 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFD+D +AL++ D +++ + A+++ +D+ R+ + Sbjct: 61 TGFDIDLMKALAAIQGFD---VEFKDMGFDGIIAAVKTGSVDMAISAISIDEERKKQVNF 117 Query: 117 AFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + Y G + + I ++ L G I Q GTT F I Sbjct: 118 SL--PYYQSGLCVAVRADNQNIKTLKDLEGKKIAAQLGTTGAK-----FAKTIPGAKVIE 170 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F + DA+ D + A + P V+ I+ A+ + Sbjct: 171 FNTANDAFMELINGGVDAFINDYP-VTAYFIKQGHPEVKVVKDIHINSEFYGIAVPKNRP 229 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 E ++ + +E G + + + NP Sbjct: 230 ELLQKIN---EGLKKLKENGQYAEIYRRWFGE--NP 260 >gi|15902145|ref|NP_357695.1| amino acid ABC transporter periplasmic amino acid-binding protein [Streptococcus pneumoniae R6] gi|15457638|gb|AAK98905.1| ABC transporter solute-binding protein - amino acid transport [Streptococcus pneumoniae R6] Length = 265 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 46/274 (16%), Positives = 90/274 (32%), Gaps = 18/274 (6%) Query: 1 MYKDFFVSI-LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56 M K L ++ L F + ++ + IK +G L +N F V Sbjct: 1 MKKVLMTMFGLVMLPLLFACSNNQSAGIEAIKSKGKLVVALNPDFAPFEYQKVVDGKNQI 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G D++ +A+++ + + ++ P++ ++QS + D+ T R S Sbjct: 61 VGSDIELAKAIATELGVE---LELSPMSFDNVLASVQSGKADLAISGVSKTDER--SKVF 115 Query: 117 AFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F Y I+ K SV+ L+ + Q G+ E D + Sbjct: 116 DFSTPYYTAKNKLIVKKSDLATYQSVNDLAQKKVGAQKGSIQETMAKDLL----QNSSLV 171 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + ++ + DA + N + + + A A+ + Sbjct: 172 SLPKNGNLITDLKSGQVDAVIFEEPVAKGFVENNPDLAIADLNFEKEQDDSYAVAMKKDS 231 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 E V T + + EL K I K + Sbjct: 232 KELKEAVDKTIQKLKESGELD---KLIEDAFKAS 262 >gi|317406066|gb|EFV86330.1| extracellular solute-binding protein family 3 [Achromobacter xylosoxidans C54] Length = 279 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 48/239 (20%), Positives = 87/239 (36%), Gaps = 13/239 (5%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 L IK+RG + G+ F + A G++ D R L+ + K + + + Sbjct: 31 TLDKIKERGTVTIGVLANGGVFGSIDPATQQLVGWNPDLARELAKGLG---VKAELVQVQ 87 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 R L S ++D+L + + R LG A P + G K GI+ L Sbjct: 88 TATRTQFLISGKVDLLIASMELNPERAEILGYAPTP-FFRVGGAAATRKDSGIAKWEDLR 146 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G +CV G++ L + ++ + A R +C A D + ++ L Sbjct: 147 GKPVCVSQGSSFARPLQ-----ADYGAVVKGYKSSSDSLLALRGGQCVAAVHDSTLIHPL 201 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAI--IQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 TN +++ P P + +G+ + V + L T+K + Sbjct: 202 LRTNPEWADYH-APIATEVLPANSVVWTRKGEADTIAAVDKVIQGWHRSGWLIATEKRL 259 >gi|224283186|ref|ZP_03646508.1| solute binding protein of ABC transporter system [Bifidobacterium bifidum NCIMB 41171] Length = 309 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 89/261 (34%), Gaps = 17/261 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF---------LKCGINTGLVGFAEVK 51 M + F + L ++ S + S G + G+ + G V Sbjct: 15 MRR--FSAALAAVLWTAGSLTACGSSSSRDDANGVSIRQPEGPTVSIGVASDQPGLG-VW 71 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 NG + GFDVD R ++ A+ +I + P+ + R L+S Q+D++ + T E Sbjct: 72 HNGGYSGFDVDVARYVAKALGYADKQIVFKPVTPRSRVSMLESAQVDMVVSSFGITERHE 131 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 ++ + + I+ + ++G CV AG+ + D ++ K Sbjct: 132 SAVTMTGPYLIVRQDLLVRAADAGDITGIKDMNGRKACVVAGS----DVTDAVRSQAPKA 187 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + + + DA + L L ++ + A+ Sbjct: 188 SIEERDDYGQCLTSLLIGDVDAVAAGDAILTGLATVKGN-GYVQVVGAPFGEERYGIAVK 246 Query: 232 QGDTEWYNIVSWTHYAMVTAE 252 G+T+ + + M+ Sbjct: 247 HGNTQLADSIGDILSDMIDDG 267 >gi|292487797|ref|YP_003530672.1| arginine ABC transporter periplasmic protein [Erwinia amylovora CFBP1430] gi|291553219|emb|CBA20264.1| Arginine ABC transport system, periplasmic component [Erwinia amylovora CFBP1430] gi|312171916|emb|CBX80173.1| Arginine ABC transport system, periplasmic component [Erwinia amylovora ATCC BAA-2158] Length = 243 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 54/266 (20%), Positives = 92/266 (34%), Gaps = 26/266 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K I+ +L S S AS ++ F + AN +GFD Sbjct: 1 MKK-----IVIAALLAGYSLSAGASQ--------TIRFAAEASYPPFEFIDANNKIQGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL I D + + +L+ ++ D + D T RE + Sbjct: 48 VDLANALCREIDADCT---FTNQAFDSLIPSLKFRRFDAVMSGMDITPEREKQVLFTQA- 103 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+D + +K ++SV L G + VQ GTT + +A+ + ++ + Sbjct: 104 --YYDNSALFITQKGKVASVDALKGKRVGVQNGTTHQKYIAEKLPE----VKVVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R DA GD + + N P + S L A+ QG++E Sbjct: 158 NAILDLKNGRLDAVFGDTAVVNEWLKKNPELAPLGEKVTDKSYFGSGLGIAVRQGNSELQ 217 Query: 239 NIVSWTHYAMVTAEEL-GITQKNINQ 263 ++ + + K Q Sbjct: 218 GKLNAALDKVKANGSYQALYSKWFQQ 243 >gi|227535250|ref|ZP_03965299.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227187134|gb|EEI67201.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 270 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 38/234 (16%), Positives = 82/234 (35%), Gaps = 8/234 (3%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 I++ + G++ V + NG G+D+D +AL + + ++ + Sbjct: 34 RIERTKKVVIGLDDTFVPMGFRQKNGQLAGYDIDLAKALFKRYG---INVDFQTIDWSMK 90 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 L+++ ID++ T R+ + + + Q + K I ++ ++G ++ Sbjct: 91 ETELKNQTIDLIWNGYSVTPERKEKVAFSDN--YLINHQILVTKTKSNIKTIKDMAGKTL 148 Query: 149 CVQAGTTTELTLA---DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 VQ G++ L K PI+++ + A R D Sbjct: 149 GVQTGSSGAFDLDAQPKLLKNFIANKTPILYDTFNDAFIDLDAGRIQGILMDEVYARYYI 208 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 PS + I D A + + D + ++ A+ + QK Sbjct: 209 AHKPDPSSYRIASDDFPPENFAVGMRKSDNVLRSKINAGLKALKADGTVAKLQK 262 >gi|119493144|ref|ZP_01624050.1| hypothetical protein L8106_08761 [Lyngbya sp. PCC 8106] gi|119452798|gb|EAW33974.1| hypothetical protein L8106_08761 [Lyngbya sp. PCC 8106] Length = 302 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 43/274 (15%), Positives = 105/274 (38%), Gaps = 16/274 (5%) Query: 1 MYKDFFVSIL-CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M+ F ++ L L+ L F + + +++ + G + G + ++ ++ + + G+ Sbjct: 1 MFPKFLIAFLGILVALSFPTTAKAETVVEKAARTGIITMGGRSDVIPYSYINDKKELVGY 60 Query: 60 DVDFCRALSSAI---FDDPSKIQYLPLNA-KERFLALQSKQIDILSRNTDWTLLREISLG 115 +D + + P ++Q+ +N E + +ID+ NT +T RE + Sbjct: 61 SLDVASLIEQEVSLYLGKPVEVQFQTINELSEVIPKTANGEIDLAC-NTQFTWQRE--MF 117 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + + G ++ K + L G I V + E TL + + Sbjct: 118 VDYSMPYSLSGIRLLIKKGSLTGTPESLVGKRIAVLPNSLGESTLKSFQPKA----VLVT 173 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAIIQGD 234 +++ A + + DA GD L +++ ++P + + + + Sbjct: 174 VAGIDQGIADLVSGKVDAIAGDSVVLAGNIQRVSE-TDYQLVPSAPYVRYAVGCMMPENN 232 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKN--INQVSK 266 + + N+V+ M+ +G T+ +N+ Sbjct: 233 STFRNLVNLAIAKMLQGYVIGETKYTDMVNKWLG 266 >gi|116516177|ref|YP_815607.1| amino acid ABC transporter, periplasmic amino acid-binding protein, putative [Streptococcus pneumoniae D39] gi|148990572|ref|ZP_01821694.1| amino acid ABC transporter, periplasmic amino acid-binding protein, putative [Streptococcus pneumoniae SP6-BS73] gi|148994307|ref|ZP_01823571.1| hypothetical protein CGSSp9BS68_07232 [Streptococcus pneumoniae SP9-BS68] gi|148996519|ref|ZP_01824237.1| hypothetical protein CGSSp11BS70_07485 [Streptococcus pneumoniae SP11-BS70] gi|149007913|ref|ZP_01831491.1| amino acid ABC transporter, periplasmic amino acid-binding protein, putative [Streptococcus pneumoniae SP18-BS74] gi|149010974|ref|ZP_01832279.1| hypothetical protein CGSSp19BS75_10978 [Streptococcus pneumoniae SP19-BS75] gi|149026543|ref|ZP_01836600.1| amino acid ABC transporter, periplasmic amino acid-binding protein, putative [Streptococcus pneumoniae SP23-BS72] gi|168483584|ref|ZP_02708536.1| ABC transporter solute-binding protein - amino acid transport [Streptococcus pneumoniae CDC1873-00] gi|168489417|ref|ZP_02713616.1| ABC transporter solute-binding protein - amino acid transport [Streptococcus pneumoniae SP195] gi|168577053|ref|ZP_02722882.1| ABC transporter solute-binding protein - amino acid transport [Streptococcus pneumoniae MLV-016] gi|194397217|ref|YP_002036822.1| ABC transporter substrate-binding protein [Streptococcus pneumoniae G54] gi|225860147|ref|YP_002741656.1| ABC transporter solute-binding protein - amino acid transport [Streptococcus pneumoniae Taiwan19F-14] gi|298229081|ref|ZP_06962762.1| amino acid ABC transporter, periplasmic amino acid-binding protein, putative [Streptococcus pneumoniae str. Canada MDR_19F] gi|298255704|ref|ZP_06979290.1| amino acid ABC transporter, periplasmic amino acid-binding protein, putative [Streptococcus pneumoniae str. Canada MDR_19A] gi|303254796|ref|ZP_07340896.1| amino acid ABC transporter, periplasmic amino acid-binding protein, putative [Streptococcus pneumoniae BS455] gi|303259154|ref|ZP_07345132.1| amino acid ABC transporter, periplasmic amino acid-binding protein, putative [Streptococcus pneumoniae SP-BS293] gi|303260911|ref|ZP_07346860.1| amino acid ABC transporter, periplasmic amino acid-binding protein, putative [Streptococcus pneumoniae SP14-BS292] gi|303263238|ref|ZP_07349161.1| amino acid ABC transporter, periplasmic amino acid-binding protein, putative [Streptococcus pneumoniae BS397] gi|303267650|ref|ZP_07353486.1| amino acid ABC transporter, periplasmic amino acid-binding protein, putative [Streptococcus pneumoniae BS457] gi|303269996|ref|ZP_07355727.1| amino acid ABC transporter, periplasmic amino acid-binding protein, putative [Streptococcus pneumoniae BS458] gi|307066785|ref|YP_003875751.1| amino acid ABC transporter/signal transduction system periplasmic domain-containing protein [Streptococcus pneumoniae AP200] gi|307126333|ref|YP_003878364.1| amino acid ABC transporter substrate-binding protein [Streptococcus pneumoniae 670-6B] gi|116076753|gb|ABJ54473.1| amino acid ABC transporter, periplasmic amino acid-binding protein, putative [Streptococcus pneumoniae D39] gi|147757094|gb|EDK64133.1| hypothetical protein CGSSp11BS70_07485 [Streptococcus pneumoniae SP11-BS70] gi|147760536|gb|EDK67511.1| amino acid ABC transporter, periplasmic amino acid-binding protein, putative [Streptococcus pneumoniae SP18-BS74] gi|147764610|gb|EDK71540.1| hypothetical protein CGSSp19BS75_10978 [Streptococcus pneumoniae SP19-BS75] gi|147924189|gb|EDK75290.1| amino acid ABC transporter, periplasmic amino acid-binding protein, putative [Streptococcus pneumoniae SP6-BS73] gi|147927337|gb|EDK78369.1| hypothetical protein CGSSp9BS68_07232 [Streptococcus pneumoniae SP9-BS68] gi|147929230|gb|EDK80233.1| amino acid ABC transporter, periplasmic amino acid-binding protein, putative [Streptococcus pneumoniae SP23-BS72] gi|172042957|gb|EDT51003.1| ABC transporter solute-binding protein - amino acid transport [Streptococcus pneumoniae CDC1873-00] gi|183572029|gb|EDT92557.1| ABC transporter solute-binding protein - amino acid transport [Streptococcus pneumoniae SP195] gi|183577300|gb|EDT97828.1| ABC transporter solute-binding protein - amino acid transport [Streptococcus pneumoniae MLV-016] gi|194356884|gb|ACF55332.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae G54] gi|225727485|gb|ACO23336.1| ABC transporter solute-binding protein - amino acid transport [Streptococcus pneumoniae Taiwan19F-14] gi|301801069|emb|CBW33736.1| putative extracellular amino acid-binding protein [Streptococcus pneumoniae INV200] gi|302598233|gb|EFL65279.1| amino acid ABC transporter, periplasmic amino acid-binding protein, putative [Streptococcus pneumoniae BS455] gi|302637748|gb|EFL68234.1| amino acid ABC transporter, periplasmic amino acid-binding protein, putative [Streptococcus pneumoniae SP14-BS292] gi|302639572|gb|EFL70029.1| amino acid ABC transporter, periplasmic amino acid-binding protein, putative [Streptococcus pneumoniae SP-BS293] gi|302640472|gb|EFL70888.1| amino acid ABC transporter, periplasmic amino acid-binding protein, putative [Streptococcus pneumoniae BS458] gi|302642819|gb|EFL73130.1| amino acid ABC transporter, periplasmic amino acid-binding protein, putative [Streptococcus pneumoniae BS457] gi|302647011|gb|EFL77235.1| amino acid ABC transporter, periplasmic amino acid-binding protein, putative [Streptococcus pneumoniae BS397] gi|306408322|gb|ADM83749.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain protein [Streptococcus pneumoniae AP200] gi|306483395|gb|ADM90264.1| ABC transporter solute-binding protein - amino acid transport [Streptococcus pneumoniae 670-6B] gi|327390520|gb|EGE88860.1| bacterial extracellular solute-binding s, 3 family protein [Streptococcus pneumoniae GA04375] gi|332075780|gb|EGI86247.1| bacterial extracellular solute-binding s, 3 family protein [Streptococcus pneumoniae GA17570] gi|332077415|gb|EGI87876.1| bacterial extracellular solute-binding s, 3 family protein [Streptococcus pneumoniae GA41301] Length = 268 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 46/274 (16%), Positives = 90/274 (32%), Gaps = 18/274 (6%) Query: 1 MYKDFFVSI-LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56 M K L ++ L F + ++ + IK +G L +N F V Sbjct: 4 MKKVLMTMFGLVMLPLLFACSNNQSAGIEAIKSKGKLVVALNPDFAPFEYQKVVDGKNQI 63 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G D++ +A+++ + + ++ P++ ++QS + D+ T R S Sbjct: 64 VGSDIELAKAIATELGVE---LELSPMSFDNVLASVQSGKADLAISGVSKTDER--SKVF 118 Query: 117 AFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F Y I+ K SV+ L+ + Q G+ E D + Sbjct: 119 DFSTPYYTAKNKLIVKKSDLATYQSVNDLAQKKVGAQKGSIQETMAKDLL----QNSSLV 174 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + ++ + DA + N + + + A A+ + Sbjct: 175 SLPKNGNLITDLKSGQVDAVIFEEPVAKGFVENNPDLAIADLNFEKEQDDSYAVAMKKDS 234 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 E V T + + EL K I K + Sbjct: 235 KELKEAVDKTIQKLKESGELD---KLIEDAFKAS 265 >gi|307299246|ref|ZP_07579047.1| extracellular solute-binding protein family 3 [Thermotogales bacterium mesG1.Ag.4.2] gi|306915042|gb|EFN45428.1| extracellular solute-binding protein family 3 [Thermotogales bacterium mesG1.Ag.4.2] Length = 255 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 54/263 (20%), Positives = 102/263 (38%), Gaps = 25/263 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V +L + L F S++ D+K+RG L+ G + G + +GD G + Sbjct: 1 MKKLLLVLVLLCMTLAF------GSLIDDVKQRGVLRVGQDAGYMPLYGTNPDGDRIGLE 54 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + ++ + K++++ +N AL S + DI+ T R +L + F Sbjct: 55 VDILKKMAEIL---DVKLEFVVVNWDGIIPALVSNKFDIIWSAMTITPER--ALRVNFTD 109 Query: 121 ITYFDGQGFIMHKKKG--ISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVF 176 GQ + + K + L+ I VQ G+T +F Sbjct: 110 PYLTVGQIILYNTNKYELPPTEEDLNDPDVKIAVQLGSTGAEAANRLLSEAQ----IFMF 165 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E ++E + R DA D + + + + D++++ AI +GD Sbjct: 166 ETIDEAAFQVASGRADAMIFDS---IYARFMAKKYDQLEVTEDLLTREDFGVAIPKGD-- 220 Query: 237 WYNIVSWTHYAMVTAEELGITQK 259 + + W + + + G Q+ Sbjct: 221 -FETLQWMNTFIQWIKTTGTLQE 242 >gi|283833895|ref|ZP_06353636.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Citrobacter youngae ATCC 29220] gi|291070566|gb|EFE08675.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Citrobacter youngae ATCC 29220] Length = 248 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 52/267 (19%), Positives = 89/267 (33%), Gaps = 23/267 (8%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K L + L F S A L +T V F + + + GFDV Sbjct: 1 MKSVLKVSLAALTLAFAVSSHAADK--------KLVVATDTAFVPFEFKQGD-KYVGFDV 51 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D A++ + D + P++ ALQ+K +D+ T R+ ++ + Sbjct: 52 DLWAAVAKELKLD---YELKPMDFSGIIPALQTKNVDLALAGITITDERKKAIDFSDG-- 106 Query: 122 TYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G ++ + SV L G + V++GT + DY KA+ F ++ Sbjct: 107 YYKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNID 162 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 R DA D + T + + D + A +G E Sbjct: 163 NAYMELGTSRADAVLHDTPNILYFIKTAGN-GQFKAVGDSLEAQQYGIAFPKGSDELREK 221 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKD 267 V+ T +E G + + Sbjct: 222 VNGALK---TLKENGTYNEIYKKWFGT 245 >gi|312870437|ref|ZP_07730557.1| ABC transporter, substrate-binding protein, family 3 [Lactobacillus oris PB013-T2-3] gi|311093994|gb|EFQ52318.1| ABC transporter, substrate-binding protein, family 3 [Lactobacillus oris PB013-T2-3] Length = 282 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 46/271 (16%), Positives = 91/271 (33%), Gaps = 17/271 (6%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 T+ + I++R + G++ V + NG G+DVD +A+ Sbjct: 25 SVTTRANTQDTWSRIERRKKVVIGLDDSFVPMGFREKNGKLVGYDVDLAKAVFKQYG--- 81 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 K+ + ++ + L++ ID+L RE + + + Q + K Sbjct: 82 IKVDFQTIDWSMKETELKNGTIDLLWNGYSMNPSREKKVAFSR--PYLDNRQVLVTKKSS 139 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH---PIVFERVEEIDAAYRAHRCD 192 I +S ++G S+ VQ G+T L K K ++++ + A+R Sbjct: 140 HIDGLSGMAGKSLGVQNGSTGAAVLDAKPKLLKDKIKNKSAVLYDTFPDAFIDLNANRIQ 199 Query: 193 AYTGDISALYALKLTNDRPSEHVILP-DIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 D + + + + + +GD ++ + Sbjct: 200 GILMDQVYADYYVDHQKDKNAYQVYESKQLPAEYFGVGMRKGDKTLRKKINQGLGRLQKD 259 Query: 252 EELGITQKNINQVSKDTTNPDVQRFLGIDKS 282 +L Q N KD+ FLG D Sbjct: 260 GQLR--QINEKWFGKDSN------FLGPDSE 282 >gi|284048792|ref|YP_003399131.1| extracellular solute-binding protein family 3 [Acidaminococcus fermentans DSM 20731] gi|283953013|gb|ADB47816.1| extracellular solute-binding protein family 3 [Acidaminococcus fermentans DSM 20731] Length = 255 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 42/268 (15%), Positives = 84/268 (31%), Gaps = 15/268 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 M K + ++ + + ++ L G F G+ GF Sbjct: 1 MKKILAAICIFAALMGTLGCGGSQTAGNKPAEKKELIVGTEPSFAPFEFPDKKSGEITGF 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D++ +A+ ++ + +A AL + ID+ T R+ + Sbjct: 61 DMELIKAMGKKAGFAKVTVKGMGFDA--LIPALDAGNIDVAIAGMSITDARKQKVNF--T 116 Query: 120 PITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y G ++ K I S++ L G +I VQ GTT A F+ Sbjct: 117 DPYYESGLATLVRKDNTTIKSLNDLKGKTIAVQLGTTGAEAAGKIEGA-----TVKTFDT 171 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + + DA D+ L L ++ + A + + + Sbjct: 172 SDTACLELKNGGADAVISDLPVLQYF-LKQGGGEYAKMVGEPTKGDMYGIATAKKNKDLA 230 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSK 266 + ++ + + E QK ++ K Sbjct: 231 DKLNKALADLKKSGE---YQKIYDKWFK 255 >gi|261246087|emb|CBG23889.1| glutamine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] Length = 248 Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats. Identities = 52/267 (19%), Positives = 88/267 (32%), Gaps = 23/267 (8%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K L + L F S A L +T V F + + + GFDV Sbjct: 1 MKSLLKVSLAALTLAFAVSSHAADK--------KLVVATDTAFVPFEFKQGD-KYVGFDV 51 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + A++ + D P++ ALQ+K ID+ T R+ ++ + Sbjct: 52 ELWDAIAKELKLD---YTLKPMDFSGIIPALQTKNIDLALAGITITDERKKAIDFSDG-- 106 Query: 122 TYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G ++ I SV L G + V++GT + DY KA+ F ++ Sbjct: 107 YYKSGLLVMVKANNNDIKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNID 162 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +R DA D + T + + + + A +G E Sbjct: 163 NAYMELGTNRADAVLHDTPNILYFIKTAGN-GQFKAVGESLEAQQYGVAFPKGSDELREK 221 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKD 267 V+ T E G + + Sbjct: 222 VNGALK---TLRENGTYNEIYKKWFGT 245 >gi|307705805|ref|ZP_07642648.1| ABC transporter solute-binding protein [Streptococcus mitis SK597] gi|307620637|gb|EFN99730.1| ABC transporter solute-binding protein [Streptococcus mitis SK597] Length = 268 Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats. Identities = 47/274 (17%), Positives = 90/274 (32%), Gaps = 18/274 (6%) Query: 1 MYKDFFVSI-LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56 M K L ++ L F + ++ L IK +G L +N F V Sbjct: 4 MKKVLMTMFGLVMLPLLFACSNNQSAGLEAIKSKGKLVVALNPDFAPFEYQKVVDGKNQI 63 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G D++ +A+++ + + ++ P++ ++QS + D+ T R S Sbjct: 64 VGSDIELAKAIATELGVE---LELSPMSFDNVLASVQSGKADLAISGVSKTDER--SKVF 118 Query: 117 AFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F Y I+ K SV+ L+ + Q G+ E D + Sbjct: 119 DFSTPYYTSKNKLIVKKSDLATYQSVNDLAQKKVGAQKGSIQETMAKDLL----QNSSLV 174 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + ++ + DA + N + + + A A+ + Sbjct: 175 SLPKNGNLITDLKSRQVDAVIFEEPVAKGFVENNPDLAIAELNFEKEQDDSYAVAMKKDS 234 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 E V T + + EL K I K + Sbjct: 235 KELKEAVDKTIQRLKDSGELD---KLIEDAFKAS 265 >gi|226949314|ref|YP_002804405.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum A2 str. Kyoto] gi|226843538|gb|ACO86204.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum A2 str. Kyoto] Length = 272 Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats. Identities = 49/286 (17%), Positives = 100/286 (34%), Gaps = 33/286 (11%) Query: 1 MYKDFF-------VSILCLIILFF----TSFSTNASILGDIKKRGFLKCGINTGLVGFAE 49 M K +S+ +I L T+ + S + IK+ G L G + Sbjct: 1 MSKKILGKLGAIIISLTMVISLVACRKNTAGNEEKSKVDKIKESGKLVVGTCADYPPYEF 60 Query: 50 ---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 + + GFD+ + ++ + K++ + ALQS +DI+ + Sbjct: 61 HKTINGKDEIVGFDITIAKEIAKDLG---VKLEIKDMKFDGLLAALQSGNVDIVIAGMNP 117 Query: 107 TLLREISLGLAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYF 164 T R+ S+ I Y Q ++ K S+ + G I VQ GTT E + Sbjct: 118 TEDRKKSVDF--SKIYYQAIQSIVVRAEDKDKFKSLDEFKGKKIGVQKGTTQE----EVA 171 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 K +V ++ + + D + + + I + K Sbjct: 172 KKEMTNSEIKSLGKVTDLVLELQNKKVDGLVLENPVAVSYAKNGKNLAVSNIKFENKDK- 230 Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 + A+ +G+ + + + T ++ +K+I++ D + Sbjct: 231 GASVAVKKGNKDLVDAIDKTLDKLIK-------EKSIDKFVTDASK 269 >gi|307709177|ref|ZP_07645636.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus mitis SK564] gi|307620123|gb|EFN99240.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus mitis SK564] Length = 279 Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats. Identities = 44/241 (18%), Positives = 89/241 (36%), Gaps = 13/241 (5%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 +++G + G + V + NG + GFD+D +A+S + K+Q+ P++ + Sbjct: 37 QEQGSITIGFDNTFVPMGFEEKNGQYTGFDIDLAQAVSEKLGF---KVQFQPIDWDMKET 93 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASIC 149 LQ+ ID + T R + + I Y + Q ++ KK I SV ++ ++ Sbjct: 94 ELQNGTIDAIWNGYSATNERREKVAFS---IPYMENQQVLVAKKSQQIHSVEEMKDKALG 150 Query: 150 VQAGTTTELTLA---DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 QAG++ L D K ++ E + R DA D Sbjct: 151 AQAGSSGYLDFEAQPDLLKNRVKDQKANQYQSFNEALIDLKNDRIDALLIDRVYANYYLQ 210 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 + +++ + A + D ++ A + + G Q+ + Sbjct: 211 SEGILNDYNVFSAGFESESFAVGVRPADKRLLQALN---QAFIELYQEGKFQEISQKWFG 267 Query: 267 D 267 + Sbjct: 268 E 268 >gi|255026869|ref|ZP_05298855.1| amino acid ABC transporter (binding protein) [Listeria monocytogenes FSL J2-003] Length = 255 Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats. Identities = 34/250 (13%), Positives = 86/250 (34%), Gaps = 8/250 (3%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 + ++ L + +S + IKK + G++ V + + GFD+D +A Sbjct: 1 MLMVMLALGACSSSESKEDQWSRIKKDKEVVIGLDDSFVPMGFRDKDDNLVGFDIDLAKA 60 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 + + K ++ P++ + L++ ID++ T R+ + + + Sbjct: 61 VFAEYG---IKAKFTPIDWTMKESELKNGSIDLIWNGYTVTDARKKQVAFSQ--PYMKNE 115 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH---PIVFERVEEID 183 Q + K I+ S + ++ Q G ++ +A + + P +++ + Sbjct: 116 QVLVTLKSSNINQFSDMKNKTLGAQNGASSIDDMAKKPEVLTDIINNNEPELYDTFDTAF 175 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 R D D ++ I+ + A + + D E ++ Sbjct: 176 IDLNNKRIDGLIIDEVYARYYIDKQKNKDDYNIITGGFDATDFAVGMRKSDKELQTKINE 235 Query: 244 THYAMVTAEE 253 + + Sbjct: 236 AFEKLYKEGK 245 >gi|297153789|gb|ADI03501.1| serine/threonine protein kinase [Streptomyces bingchenggensis BCW-1] Length = 669 Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats. Identities = 37/239 (15%), Positives = 74/239 (30%), Gaps = 9/239 (3%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 + GI G G + GFDVD ++ A+ +P+ I++ + +R L+ Sbjct: 439 KITIGIKFDQPGLGFKTPAGRYSGFDVDVATYIAKALGHNPADIEWKETLSSDREAVLER 498 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAG 153 ++D + T RE + A Q ++ + + L+G +C G Sbjct: 499 GEVDFIVAAYAVTDAREKKVDFA--GPYLEAHQDVLIRGDDTSVRTAQDLNGRRVCAPTG 556 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 + + L + F + + + DA T D + L P Sbjct: 557 SVSALNVRTKFA---PQAQVSERATYALCLSDLKDGAVDAVTADDAILAGYAAR--EPDS 611 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272 + ++ + +G + + M K + K P Sbjct: 612 FELGGLAMTDERYGIGVAKGSP-LKDKIQRALDKMTADGSWTRALKQNLPLLKTDAPPQ 669 >gi|170756143|ref|YP_001781581.1| polar amino acid ABC transporter amino acid-binding protein [Clostridium botulinum B1 str. Okra] gi|169121355|gb|ACA45191.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum B1 str. Okra] Length = 272 Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats. Identities = 49/286 (17%), Positives = 100/286 (34%), Gaps = 33/286 (11%) Query: 1 MYKDFF-------VSILCLIILFF----TSFSTNASILGDIKKRGFLKCGINTGLVGFAE 49 M K +S+ +I L T+ + S + IK+ G L G + Sbjct: 1 MSKKILGKLGAIIISLTMVISLVACGKNTAGNEEKSKVDKIKESGKLVVGTCADYPPYEF 60 Query: 50 ---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 + + GFD+ + ++ + K++ + ALQS +DI+ + Sbjct: 61 HKTINGKDEIVGFDITIAKEIAKDLG---VKLEIKDMKFDGLLAALQSGNVDIVIAGMNP 117 Query: 107 TLLREISLGLAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYF 164 T R+ S+ I Y Q ++ K S+ + G I VQ GTT E + Sbjct: 118 TEDRKKSVDF--SKIYYQAIQSVVVRAEDKDKFKSLDEFKGKKIGVQKGTTQE----EVA 171 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 K +V ++ + + D + + + I + K Sbjct: 172 KKEMTNSEIKSLGKVTDLVLELQNKKVDGLVLENPVAVSYAKNGKNLAVSNIKFENKDK- 230 Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 + A+ +G+ + + + T ++ +K+I++ D + Sbjct: 231 GASVAVKKGNKDLVDAIDKTLDKLIK-------EKSIDKFVTDASK 269 >gi|86138396|ref|ZP_01056970.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Roseobacter sp. MED193] gi|85824921|gb|EAQ45122.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Roseobacter sp. MED193] Length = 260 Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats. Identities = 48/262 (18%), Positives = 96/262 (36%), Gaps = 18/262 (6%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 F + L L F T+ A L IK+ G ++ ++ F V + + GFD Sbjct: 12 FAAGLALAATFTTANFAAAEELDQIKEDGVIRIAMSGAYPPFNFVNDSNEVVGFDPAVGA 71 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ + + ++ + L + + D + + T R+ + Y+ Sbjct: 72 EIAKRMGVE---VEIVTTAWDGIIGGLLANKYDAIVGSMSITEERQQVVDFVG---PYYT 125 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 + I K GI+S + L A + + G T E + M Y ++ + E+ Sbjct: 126 TKRAIFAKPGGITSAAALGDAKVGLTLGETHEAWARE------MGYDVRTYKGLPELLLE 179 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAIIQGDTEWYNIVSWT 244 R D D + A+ + ++V++ D ++ AI +G+ E + Sbjct: 180 LEHGRVDVIVNDS--IAAILAMKETGQDYVMITDFETEEFGAGIAIRKGNPELAAAMQGA 237 Query: 245 HYAMVTAEELGITQKNINQVSK 266 AM+ E G + N+ Sbjct: 238 LDAMM---EDGTYLEIANEWVG 256 >gi|320334510|ref|YP_004171221.1| ABC transporter periplasmic subunit [Deinococcus maricopensis DSM 21211] gi|319755799|gb|ADV67556.1| ABC-type transporter, periplasmic subunit family 3 [Deinococcus maricopensis DSM 21211] Length = 251 Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats. Identities = 44/246 (17%), Positives = 89/246 (36%), Gaps = 18/246 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + +L T+ A IK G +K F + GF+ Sbjct: 1 MKRTLVLF----AVLAATASPAQARTWDQIKSSGTIKIATEGAFKPFNYFEGK-TLTGFE 55 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ A++ + K+Q++ + L + D + + T R+ ++ + Sbjct: 56 VELGNAIAKQLG---MKVQWVTQPFDGLLIGLNQDRYDFVIASHGITPERQKAVDFSA-- 110 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 ++ G I+ K G + LSG + VQ GTT + ++K +P + Sbjct: 111 -PHYCTGGLIVSKTGGPKTAKDLSGKIVAVQVGTTYLDNVKKVAGVKSVKTYP----KDT 165 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A R DA+ D A+ P + D++ + + A+ +G+ Sbjct: 166 DAQQAIMMGRADAWVSDKFL--AIDAIKANPGKLQQ-GDLLFQERIGMAVKKGNASLLKE 222 Query: 241 VSWTHY 246 ++ T Sbjct: 223 LNTTLQ 228 >gi|148379979|ref|YP_001254520.1| amino acid ABC transporter substrate-binding protein [Clostridium botulinum A str. ATCC 3502] gi|153934075|ref|YP_001384278.1| polar amino acid ABC transporter amino acid-binding protein [Clostridium botulinum A str. ATCC 19397] gi|153938267|ref|YP_001391342.1| polar amino acid ABC transporter amino acid-binding protein [Clostridium botulinum F str. Langeland] gi|148289463|emb|CAL83560.1| probable amino acid abc transporter,substrate-binding protein [Clostridium botulinum A str. ATCC 3502] gi|152930119|gb|ABS35619.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum A str. ATCC 19397] gi|152934163|gb|ABS39661.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum F str. Langeland] gi|295319371|gb|ADF99748.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum F str. 230613] Length = 272 Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats. Identities = 49/286 (17%), Positives = 100/286 (34%), Gaps = 33/286 (11%) Query: 1 MYKDFF-------VSILCLIILFF----TSFSTNASILGDIKKRGFLKCGINTGLVGFAE 49 M K +S+ +I L T+ + S + IK+ G L G + Sbjct: 1 MSKKILGKLGAIIISLTMVISLVACGKNTAGNEEKSKVDKIKESGKLVVGTCADYPPYEF 60 Query: 50 ---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 + + GFD+ + ++ + K++ + ALQS +DI+ + Sbjct: 61 HKTINGKDEIVGFDITIAKEIAKDLG---VKLEIKDMKFDGLLAALQSGNVDIVIAGMNP 117 Query: 107 TLLREISLGLAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYF 164 T R+ S+ I Y Q ++ K S+ + G I VQ GTT E + Sbjct: 118 TEDRKKSVDF--SKIYYQAIQSVVVRAEDKDKFKSLEEFKGKKIGVQKGTTQE----EVA 171 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 K +V ++ + + D + + + I + K Sbjct: 172 KKEMTNSEIKSLGKVTDLVLELQNKKVDGLVLENPVAVSYAKNGKNLAVSNIKFENKDK- 230 Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 + A+ +G+ + + + T ++ +K+I++ D + Sbjct: 231 GASVAVKKGNKDLVDAIDKTLDKLIK-------EKSIDKFVTDASK 269 >gi|161504004|ref|YP_001571116.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160865351|gb|ABX21974.1| hypothetical protein SARI_02097 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 248 Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats. Identities = 52/267 (19%), Positives = 88/267 (32%), Gaps = 23/267 (8%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K L + L F S A L +T V F + + + GFD+ Sbjct: 1 MKSILKVSLAALTLAFAVSSHAADK--------KLVVATDTAFVPFEFKQGD-KYVGFDI 51 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D A++ + D P++ ALQ+K ID+ T R+ ++ + Sbjct: 52 DLWAAIAKELKLD---YTLKPMDFSGIIPALQTKNIDLALAGITITDERKKAIDFSDG-- 106 Query: 122 TYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G ++ I SV L G + V++GT + DY KA+ F ++ Sbjct: 107 YYKSGLLVMVKANNNDIKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNID 162 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +R DA D + T + + + + A +G E Sbjct: 163 NAYMELGTNRADAVLHDTPNILYFIKTAGN-GQFKSVGESLEAQQYGIAFPKGSNELREK 221 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKD 267 V+ T E G + + Sbjct: 222 VNGALK---TLRENGTYNEIYKKWFGT 245 >gi|167994765|ref|ZP_02575856.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|16422914|gb|AAL23174.1| putative arginine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|205327421|gb|EDZ14185.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|267996685|gb|ACY91570.1| putative arginine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301160843|emb|CBW20374.1| putative arginine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312915452|dbj|BAJ39426.1| arginine ABC transporter substrate binding protein [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321223226|gb|EFX48296.1| putative arginine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323132692|gb|ADX20122.1| putative arginine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] Length = 246 Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats. Identities = 42/264 (15%), Positives = 89/264 (33%), Gaps = 28/264 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V +L + + S S L G + + V A+ GFD Sbjct: 1 MKKKLIVMLLASLSVHAASVSAR-----------TLHFGTSATYAPYEFVDADNKIVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + + S + + +L+ K+ D + D T RE + + Sbjct: 50 IDVANAVCKEMQAECS---FTNQSFDSLIPSLRFKKFDAVIAGMDMTPKREQQVSFSQ-- 104 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y ++ +K + + L G + ++ GTT + L D P+ ++ Sbjct: 105 PYYEGLSAVVVTRKGAYHTFADLKGKKVGLENGTTHQRYLQD----KQQAITPVAYDSYL 160 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235 + +R + GD + A+ ++ I+ + S A+ + + Sbjct: 161 NAFTDLKNNRLEGVFGD---VAAIGKWLKNNPDYAIMDERASDPDYYGKGLGIAVRKDND 217 Query: 236 EWYNIVSWTHYAMVTAEELGITQK 259 ++ + + E Q+ Sbjct: 218 ALLQEINAALDKVKASPEYAQMQE 241 >gi|154484327|ref|ZP_02026775.1| hypothetical protein EUBVEN_02040 [Eubacterium ventriosum ATCC 27560] gi|149734804|gb|EDM50721.1| hypothetical protein EUBVEN_02040 [Eubacterium ventriosum ATCC 27560] Length = 285 Score = 132 bits (332), Expect = 1e-28, Method: Composition-based stats. Identities = 42/289 (14%), Positives = 91/289 (31%), Gaps = 32/289 (11%) Query: 1 MYKDFFVSILCLIILFF----------------TSFSTNASILGDIKKRGF-------LK 37 M K V + ++ + T+ + I G L Sbjct: 1 MKKFLAVVMTAVLAMSMMTACGSSKSSEENKDTTAAKAETTKAETIDASGVTLVSDGVLT 60 Query: 38 CGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96 G G F ++ +G +GFD+D ++ + K+ ++ + + K Sbjct: 61 VGAEMGYAPFETLQKDGKTPEGFDIDIITEIAKRLG---LKVNFINTSFDGILGKI-GKD 116 Query: 97 IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT 156 D++ R+ ++ + IT + I+S+ L G S+ VQ GTT+ Sbjct: 117 YDVVCSAVTINPTRKKAVLFSTPYITNYQTVVVKKGSDLKINSLKDLDGKSVGVQKGTTS 176 Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216 + +++Y + +++ DA D + N E Sbjct: 177 DQLMSEYKSTKTINVEVAANDKLLNCFTQLTNGEIDAVVVDSTVADGFVAKNPDKYEKAF 236 Query: 217 LPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 D AI + + + ++ A+ ++ G + + Sbjct: 237 -SDKTEPEEFGIAIGKNNAKLQEAIN---KALEQMDKDGFLKDTADYWF 281 >gi|82777621|ref|YP_403970.1| arginine 3rd transport system periplasmic binding protein [Shigella dysenteriae Sd197] gi|309785094|ref|ZP_07679727.1| arginine-binding periplasmic protein 1 [Shigella dysenteriae 1617] gi|81241769|gb|ABB62479.1| arginine 3rd transport system periplasmic binding protein [Shigella dysenteriae Sd197] gi|308927464|gb|EFP72938.1| arginine-binding periplasmic protein 1 [Shigella dysenteriae 1617] Length = 243 Score = 132 bits (332), Expect = 1e-28, Method: Composition-based stats. Identities = 50/269 (18%), Positives = 96/269 (35%), Gaps = 32/269 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ T ++ F + AN GFD Sbjct: 1 MKKVLIAALIAGFSLSATAAET-------------IRFATEASYPPFESIDANNQIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL I + + +L+ ++++ + D T RE + Sbjct: 48 VDLAQALCKEIDATCT---FSNQAFDSLIPSLKFRRVEAVMAGMDITPEREKQVLFT--- 101 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+D + ++ +SV QL G + VQ GTT + + D + + + ++ + Sbjct: 102 TPYYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFIMD----KHPEITTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + D P + + K L A+ QG+TE Sbjct: 158 NAKLDLQNGRIDGVFGDTAVVTEWLK--DNPKLEAVGDKVTDKDYFGTGLGIAVRQGNTE 215 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVS 265 ++ A+ ++ G + N+ Sbjct: 216 LQQKLN---TALEKVKKDGTYETIYNKWF 241 >gi|253576766|ref|ZP_04854092.1| amino acid ABC transporter [Paenibacillus sp. oral taxon 786 str. D14] gi|251843797|gb|EES71819.1| amino acid ABC transporter [Paenibacillus sp. oral taxon 786 str. D14] Length = 261 Score = 132 bits (332), Expect = 1e-28, Method: Composition-based stats. Identities = 48/282 (17%), Positives = 100/282 (35%), Gaps = 31/282 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M V L L +L S S K+ L GI+ N + GFD Sbjct: 7 MIMMSLVMALVLTVLAGCSGSGAG------KEDNKLVIGIDDKFAPMGFRDENNEIVGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D+ +A + + + + + P++ + L S +ID++ T R+ + Sbjct: 61 IDYAKAAAEKMGMEAT---FQPIDWSAKESELNSGRIDLIWNGYTITEERKGKVLF--TK 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Q + I+ +S L+G ++ +QA ++ D + F Sbjct: 116 PYLKNSQVVVTLADSEITQLSDLAGKTVGLQA-LSSAADALDAAPIKSEIKTISEFPDNV 174 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + R DA D + +L + ++ + +G+ E N Sbjct: 175 LALTDLKTKRLDAVVIDEVVARYYMAKEE--GTFKLLDESLAPEEYGIGVKKGNEELLNK 232 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDV-QRFLGIDK 281 + QK ++++++D T ++ +++ G DK Sbjct: 233 L----------------QKALDELNQDGTASEISKKWFGEDK 258 >gi|116751320|ref|YP_848007.1| extracellular solute-binding protein [Syntrophobacter fumaroxidans MPOB] gi|116700384|gb|ABK19572.1| extracellular solute-binding protein, family 3 [Syntrophobacter fumaroxidans MPOB] Length = 252 Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 47/264 (17%), Positives = 94/264 (35%), Gaps = 15/264 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V ++C + + + + + ++ GI+ FA V G GFD Sbjct: 1 MGKKVLVCLVCALSMLLFGNAPSGMAQEKV----YVN-GIDANFPPFAFVDKTGKPDGFD 55 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V ++ + K+ + P++ +L +K+IDI++ T R + Sbjct: 56 VAALDWIAKEMGF---KVTHKPMDWDGIIPSLNAKKIDIIASGMSITEARRKEVNFTE-- 110 Query: 121 ITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADY-FKAHNMKYHPIVFER 178 + Q + K + + + G I VQ GTT + + KA K+ + ++ Sbjct: 111 PYWKITQVLVAKKDSAATPETAMKDGQKIGVQRGTTEAKWIEENLIKAQGKKFELVYYDS 170 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R A D + A +P + +I + A+ + DTE Sbjct: 171 APLAVEDVVNGRIVAAAMDDA--PAKDAEKKKPVK-IIGSFGMPDETFGYAVRKEDTELL 227 Query: 239 NIVSWTHYAMVTAEELGITQKNIN 262 ++ + + E + +K Sbjct: 228 KKLNEGLKKLQASPEWDVLRKKYE 251 >gi|313140336|ref|ZP_07802529.1| solute binding protein of ABC transporter system [Bifidobacterium bifidum NCIMB 41171] gi|313132846|gb|EFR50463.1| solute binding protein of ABC transporter system [Bifidobacterium bifidum NCIMB 41171] Length = 295 Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 89/261 (34%), Gaps = 17/261 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF---------LKCGINTGLVGFAEVK 51 M + F + L ++ S + S G + G+ + G V Sbjct: 1 MRR--FSAALAAVLWTAGSLTACGSSSSRDDANGVSIRQPEGPTVSIGVASDQPGLG-VW 57 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 NG + GFDVD R ++ A+ +I + P+ + R L+S Q+D++ + T E Sbjct: 58 HNGGYSGFDVDVARYVAKALGYADKQIVFKPVTPRSRVSMLESAQVDMVVSSFGITERHE 117 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 ++ + + I+ + ++G CV AG+ + D ++ K Sbjct: 118 SAVTMTGPYLIVRQDLLVRAADAGDITGIKDMNGRKACVVAGS----DVTDAVRSQAPKA 173 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + + + DA + L L ++ + A+ Sbjct: 174 SIEERDDYGQCLTSLLIGDVDAVAAGDAILTGLATVKGN-GYVQVVGAPFGEERYGIAVK 232 Query: 232 QGDTEWYNIVSWTHYAMVTAE 252 G+T+ + + M+ Sbjct: 233 HGNTQLADSIGDILSDMIDDG 253 >gi|307710246|ref|ZP_07646689.1| putative amino acid transporter, amino acid-binding protein [Streptococcus mitis SK564] gi|307619008|gb|EFN98141.1| putative amino acid transporter, amino acid-binding protein [Streptococcus mitis SK564] Length = 268 Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 46/274 (16%), Positives = 90/274 (32%), Gaps = 18/274 (6%) Query: 1 MYKDFFVSI-LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56 M K L ++ L F + ++ + IK +G L +N F V Sbjct: 4 MKKVLMTMFGLVMLPLLFACSNNQSAGIEAIKSKGKLVVALNPDFAPFEYQKVVDGKNQI 63 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G D++ +A+++ + + ++ P++ ++QS + D+ T R S Sbjct: 64 VGSDIELAKAIATELGVE---LELSPMSFDNVLASVQSGKADLAISGVSKTDER--SKVF 118 Query: 117 AFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F Y I+ K SV+ L+ + Q G+ E D + Sbjct: 119 DFSIPYYTSKNKLIVKKSDLATYQSVNDLAQKKVGAQKGSIQETMAKDLL----QNSSLV 174 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + ++ + DA + N + + + A A+ + Sbjct: 175 SLPKNGNLITDLKSGQVDAVIFEEPVAKGFVENNPDLAIADLNFEKEQDDSYAVAMKKDS 234 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 E V T + + EL K I K + Sbjct: 235 KELKEAVDKTIQKLKESGELD---KLIEDAFKAS 265 >gi|168231389|ref|ZP_02656447.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194469197|ref|ZP_03075181.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194455561|gb|EDX44400.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205334246|gb|EDZ21010.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 246 Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 43/264 (16%), Positives = 90/264 (34%), Gaps = 28/264 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V +L + + S S L G + + V A+ GFD Sbjct: 1 MKKKLIVMLLASLSVHAASLSAR-----------TLHFGTSATYAPYEFVDADNKIVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + + S + + +L+ K+ D + D T RE + + Sbjct: 50 IDVANAVCKEMQAECS---FTNQSFDSLIPSLRFKKFDAVIAGMDMTPKREQQVSFSQ-- 104 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y ++ +K + + L G + ++ GTT + L D P+ ++ Sbjct: 105 PYYEGLSAVVVTRKGAYHTFADLKGKKVGLENGTTHQRYLQD----KQQAITPVAYDSYL 160 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235 + +R + GD + A+ ++ I+ + S A+ +G+ Sbjct: 161 NAFTDLKNNRLEGVFGD---VAAIGKWLKNNPDYAIMDERASDPDYYGKGLGIAVRKGND 217 Query: 236 EWYNIVSWTHYAMVTAEELGITQK 259 ++ + + E Q+ Sbjct: 218 ALLQEINAALDKVKASPEYAQMQE 241 >gi|312796580|ref|YP_004029502.1| cystine-binding protein [Burkholderia rhizoxinica HKI 454] gi|312168355|emb|CBW75358.1| Cystine-binding protein [Burkholderia rhizoxinica HKI 454] Length = 280 Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 46/260 (17%), Positives = 87/260 (33%), Gaps = 29/260 (11%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 +K+ G L+ G+ F A+G+ G+DVD +A++ + P +++ Sbjct: 47 DQVKEHGTLRIGLEGTYPPFNFRDAHGELVGYDVDVAKAIALRLGVKP---EFITTEWSG 103 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGA 146 LQ+ + D++ T +R+ + + P TY Q S+ L G Sbjct: 104 IIAGLQAGKFDVIVNQVGITPVRQQTFDFSQ-PYTYSVAQLIQRKDDSRQFKSLDNLKGK 162 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 + V G+ + E A R DA D L L Sbjct: 163 KLGVSLGSNYND-----MAKSVPGIEVKTYPGAPEYLRDLAAGRIDAALNDRLMLAYLIK 217 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 TN P + + + +G+ ++ + I Q+ Sbjct: 218 TNALP--LRPSSTLGQQEKVGIPFKKGNPKFAKAIDDA----------------IAQLKA 259 Query: 267 DTTNPDVQ-RFLGIDKSSNI 285 D T P + ++ G+D + + Sbjct: 260 DGTLPKISDKWFGLDVTRPL 279 >gi|300362319|ref|ZP_07058495.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus gasseri JV-V03] gi|300353310|gb|EFJ69182.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus gasseri JV-V03] Length = 263 Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 47/252 (18%), Positives = 85/252 (33%), Gaps = 7/252 (2%) Query: 13 IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72 + + S IK+RG L G++ V + NG GFDVD A+ I Sbjct: 17 ASIGLSGCQRQESSWQKIKERGTLVIGVDDSFVPMDFRQKNGKLVGFDVDLATAVCKKIG 76 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 P + ++ + L++ ID++ T R + + + Q + Sbjct: 77 LKPD---FQTIDWSMKETELRNGTIDVIWNGYTKTKARAKKVAFSQ--PYLENDQILVTR 131 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH-PIVFERVEEIDAAYRAHRC 191 KK I + Q+ G + VQ G++ L +Y + ++++ +A R Sbjct: 132 KKDKIDNYRQMKGKVLGVQTGSSGADDLDNYPNVLKKRVKSIVLYDTYNNAFIDLKAGRI 191 Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 D + E S + I + D + ++ + Sbjct: 192 TGLLIDGVYANYYLAHSKYQKEFKKEKLPYSSEKFSVGINKKDKILKDKINQALEHLEKT 251 Query: 252 EEL-GITQKNIN 262 EL I QK N Sbjct: 252 GELEKIRQKWFN 263 >gi|317047481|ref|YP_004115129.1| cationic amino acid ABC transporter periplasmic-binding protein [Pantoea sp. At-9b] gi|316949098|gb|ADU68573.1| cationic amino acid ABC transporter, periplasmic binding protein [Pantoea sp. At-9b] Length = 248 Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 50/267 (18%), Positives = 92/267 (34%), Gaps = 23/267 (8%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K + + L F+ ST A L +T V F + + + GFD+ Sbjct: 1 MKSLIKVSVAALALAFSLSSTAADK--------KLVVATDTAFVPFEFKQGD-QYVGFDI 51 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D A++ + D P++ ALQ++ +D+ T R+ ++ + Sbjct: 52 DLWAAIAKELKLD---YTLKPMDFSGIIPALQTRNVDVALAGITITDERKKAIDFSDG-- 106 Query: 122 TYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G ++ + I S+ L+G + V++GT + DY KAH F ++ Sbjct: 107 YYKSGLLVMVRSNENNIKSIDDLNGKVVAVKSGTGSV----DYAKAHIKSKDLRQFPNID 162 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +R DA D + T + + + IS A +G + Sbjct: 163 NAYMELGTNRADAVLHDTPNILYFIHTAGK-GRFKAVGESISAQQYGIAFPKGSDDLREK 221 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKD 267 V+ T + G + Sbjct: 222 VNGALK---TLRDNGTYNTIYKKWFGS 245 >gi|170770039|ref|ZP_02904492.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia albertii TW07627] gi|170121105|gb|EDS90036.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia albertii TW07627] Length = 243 Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 44/268 (16%), Positives = 92/268 (34%), Gaps = 30/268 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L ++ + G++ F + AN GFD Sbjct: 1 MKKLVLAALLASCAFGASAAE-------------KINFGVSATYPPFESMDANNQIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + + + + +L+ ++ D + D T R + Sbjct: 48 IDLAKALCKQMQAECT---FTNHAFDSLIPSLKFRKYDAVISGMDITPERSKQVSFT--- 101 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y++ ++ KK + + L G I ++ GTT + + D + + + ++ + Sbjct: 102 TPYYENSAVVIAKKDAYKTFADLKGKRIGMENGTTHQKYIQD----QHPEVKTVSYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR---PSEHVILPDIISKSPLAPAIIQGDTEW 237 + R D GD + + TN + +E V P L A+ + Sbjct: 158 NAFIDLKNGRIDGVFGDTAVVNEWLKTNPQLGVATEKVTDPQYFGT-GLGIAVRPDNKAL 216 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVS 265 ++ A+ + G QK +Q Sbjct: 217 LEKLN---NALAAVKADGTYQKISDQWF 241 >gi|145592208|ref|YP_001154210.1| extracellular solute-binding protein [Pyrobaculum arsenaticum DSM 13514] gi|145283976|gb|ABP51558.1| extracellular solute-binding protein, family 3 [Pyrobaculum arsenaticum DSM 13514] Length = 282 Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 53/255 (20%), Positives = 89/255 (34%), Gaps = 13/255 (5%) Query: 18 TSFSTNAS---ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 TS A + IKKRG L G + + V AN + G+D+D R ++ A+ + Sbjct: 36 TSTPAAAQCPVSVDIIKKRGKLILGTDATWPPWEWV-ANNTFVGWDIDIAREIAKALGVE 94 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 ++ + A++ +D+ WT RE L + Y + + Sbjct: 95 ---LEIRDMRFAGLLEAVRKGDVDLALSAITWTTEREKVLEFSM--PYYLESIVIVTKTS 149 Query: 135 KG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 + I+ V L G + VQ GTT + + + + R DA Sbjct: 150 RNDINKVEDLYGKKVGVQIGTTHDEWSTTNLEKPGKASVSRYDKVYPYMVEVLRRGDVDA 209 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 D S AL LP S ++ A+ + + +V ++ + Sbjct: 210 IILDRSIATALVRKFPDLKIAFELPG--SAGYISVAMPKCAQDLKLVVDQVIENLIQTGK 267 Query: 254 LG-ITQKNINQVSKD 267 L I QKN K Sbjct: 268 LDEIMQKNFELFLKS 282 >gi|322376232|ref|ZP_08050725.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus sp. M334] gi|321282039|gb|EFX59046.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus sp. M334] Length = 271 Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 44/276 (15%), Positives = 94/276 (34%), Gaps = 23/276 (8%) Query: 1 MYKDFFVSILCLIILFF------TSFSTNASILGDIKKRGFLKCGINTGLVGF---AEVK 51 M ++ +LC + F + + + S + IK++G L + F + V Sbjct: 1 MKSKKWIFVLCSFLASFFLVACQSGSNGSQSAVEAIKQKGKLVVATSPDYAPFEFQSLVD 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G D+D +A++ + K++ ++ +LQ+ + D+ T R Sbjct: 61 GKNQVVGADIDMAQAIADELG---VKLEISSMSFDNVLTSLQTGKADLAVAGISATDER- 116 Query: 112 ISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 F Y + F++ K +++ L A+I Q GT E + + Sbjct: 117 -KEVFDFSIPYYENKISFLVRKADVEKYKALTSLESANIAAQKGTVPESMVKEQLPKAQ- 174 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + E +A + DA D + N + + + A A Sbjct: 175 ---LTSLTNMGEAVNELQAGKVDAVHMDEPVALSYAAKNADLAVATVSLKMKDGEANAVA 231 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 + + + +V ++ G QK + + + Sbjct: 232 LRKNSADLKEVVDKVIQ---KLKDDGTYQKYLEKAA 264 >gi|295096505|emb|CBK85595.1| L-glutamine-binding protein [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 247 Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 52/267 (19%), Positives = 90/267 (33%), Gaps = 24/267 (8%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K L + L F S A L +T V F + + + GFDV Sbjct: 1 MKSVLKVSLAALTLAFAVTSQAAD---------KLVVATDTAFVPFEFKQGD-KYVGFDV 50 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D A++ + D P++ ALQ+K +D+ T R+ ++ + Sbjct: 51 DLWAAVAKELKLD---YTLKPMDFSGIIPALQTKNVDLALAGITITEERKKAIDFSDG-- 105 Query: 122 TYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G ++ + SV L G + V++GT + DY KA+ F ++ Sbjct: 106 YYKSGLLVMVKADNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNID 161 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +R DA D + T + + D + A +G + N Sbjct: 162 NAYMELGTNRADAVLHDTPNILYFIKTAGN-GKFKAVGDSLEAQQYGIAFPKGSDDLRNK 220 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKD 267 V+ T +E G + + Sbjct: 221 VNGALK---TLKENGTYNEIYKKWFGT 244 >gi|295090528|emb|CBK76635.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [Clostridium cf. saccharolyticum K10] Length = 282 Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 47/230 (20%), Positives = 85/230 (36%), Gaps = 17/230 (7%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 G L G N + + G DV+ A+ + D +Q + AL Sbjct: 65 GTLIMGTNATFPPYEYYDGD-AIVGIDVEIAEAIGEKLGMD---VQVEDMEFDALIPALV 120 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153 S ++D ++ T RE S+ Q I+ + I+SV L+G + VQ G Sbjct: 121 SDKVDFVAAGMTVTPDREASVNF--TDTYATAAQVIIVKEGSDIASVDDLAGKVVGVQLG 178 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 TT +L +++ + + E + + DA D + D Sbjct: 179 TTGDLLVSEI-----EGTTVERYNKGFEAVQSVTQGKIDAVVIDNAPAKNFVAQGDG--- 230 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 VIL + +S A A+ + +TE ++ A+ +E G +++ Sbjct: 231 LVILEEALSSEDYAMAVNKDNTELLEQING---AIAELKEEGTLDAIVDK 277 >gi|116617768|ref|YP_818139.1| ABC-type amino acid transport system, permease and periplasmic component [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116096615|gb|ABJ61766.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter substrate-binding protein, PAAT family [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 490 Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 46/274 (16%), Positives = 95/274 (34%), Gaps = 20/274 (7%) Query: 2 YKDFFVSILCLIILFFTSFSTNASI------LGDIKKRGFLKCGINTGLVGFAE---VKA 52 + + +++ T+A L IKK+G L G++ F V Sbjct: 7 KISIVIMTITMLLPLLAVLPTHADAATTDPALTKIKKKGTLVIGLSADYAPFEFHATVNG 66 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 GFDV+ + ++ + P + ALQ+ +ID++ + T RE Sbjct: 67 RDQIVGFDVEMAKKIAKDLGVKPV---IKEMGFDGLIGALQTGKIDVIISGINATPEREK 123 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISS-VSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 + + + + S ++ SG I VQ TT E Y + Sbjct: 124 VVDFSNSYMKPLQTVMVLKKDASKYSGNLNSFSGKKIGVQKQTTQET----YAQESMSGS 179 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS-PLAPAI 230 + ++V ++ A + + + T + +I P S ++ A+ Sbjct: 180 TIVSLQKVPDLVAQLSTGKIAGIVLNEPI--SKAYTQQNKAFKIIYPKPSSGEGAVSIAM 237 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 + ++ + ++ + EL QK N++ Sbjct: 238 PKNSPVLKAKINKSLGNIIKSGELEAYQKRANKL 271 >gi|167553557|ref|ZP_02347306.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|168244868|ref|ZP_02669800.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168263294|ref|ZP_02685267.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168467068|ref|ZP_02700916.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168822518|ref|ZP_02834518.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194444606|ref|YP_002043609.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194450279|ref|YP_002048397.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197251742|ref|YP_002149268.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197263087|ref|ZP_03163161.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|198246245|ref|YP_002218238.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200388042|ref|ZP_03214654.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|224586195|ref|YP_002639994.1| arginine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238910512|ref|ZP_04654349.1| probable arginine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|194403269|gb|ACF63491.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194408583|gb|ACF68802.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|195630522|gb|EDX49134.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197215445|gb|ACH52842.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197241342|gb|EDY23962.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197940761|gb|ACH78094.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199605140|gb|EDZ03685.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205322022|gb|EDZ09861.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205336334|gb|EDZ23098.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205341108|gb|EDZ27872.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205347863|gb|EDZ34494.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|224470723|gb|ACN48553.1| probable arginine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|320088781|emb|CBY98539.1| Arginine-binding periplasmic protein 1 Flags: Precursor [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|326630270|gb|EGE36613.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 246 Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 43/264 (16%), Positives = 90/264 (34%), Gaps = 28/264 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V +L + + S S L G + + V A+ GFD Sbjct: 1 MKKKLIVMLLASLSVHAASVSAR-----------TLHFGTSATYAPYEFVDADNKIVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + + S + + +L+ K+ D + D T RE + + Sbjct: 50 IDVANAVCKEMQAECS---FTNQSFDSLIPSLRFKKFDAVIAGMDMTPKREQQVSFSQ-- 104 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y ++ +K + + L G + ++ GTT + L D P+ ++ Sbjct: 105 PYYEGLSAVVVTRKGAYHTFADLKGKKVGLENGTTHQRYLQD----KQQAITPVAYDSYL 160 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235 + +R + GD + A+ ++ I+ + S A+ +G+ Sbjct: 161 NAFTDLKNNRLEGVFGD---VAAIGKWLKNNPDYAIMDERASDPDYYGKGLGIAVRKGND 217 Query: 236 EWYNIVSWTHYAMVTAEELGITQK 259 ++ + + E Q+ Sbjct: 218 ALLQEINAALDKVKASPEYAQMQE 241 >gi|311064464|ref|YP_003971189.1| solute-binding protein of ABC transporter system [Bifidobacterium bifidum PRL2010] gi|310866783|gb|ADP36152.1| Predicted solute binding protein of ABC transporter system [Bifidobacterium bifidum PRL2010] Length = 309 Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 89/261 (34%), Gaps = 17/261 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF---------LKCGINTGLVGFAEVK 51 M + F + L ++ S + S G + G+ + G V Sbjct: 15 MRR--FSAALAAVLWTAGSLTACGSSSSRNDANGVSIRQPEGPTVSIGVASDQPGLG-VW 71 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 NG + GFDVD R ++ A+ +I + P+ + R L+S Q+D++ + T E Sbjct: 72 HNGGYSGFDVDVARYVAKALGYADKQIVFKPVTPRSRVSMLESAQVDMVVSSFGITERHE 131 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 ++ + + I+ + ++G CV AG+ + D ++ K Sbjct: 132 SAVTMTGPYLIVRQDLLVRAADAGDITGIKDMNGRKACVVAGS----DVTDAVRSQAPKA 187 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + + + DA + L L ++ + A+ Sbjct: 188 SIEERDDYGQCLTSLLIGDVDAVAAGDAILTGLATVKGN-GYVQVVGAPFGEERYGIAVK 246 Query: 232 QGDTEWYNIVSWTHYAMVTAE 252 G+T+ + + M+ Sbjct: 247 HGNTQLADSIGDILSDMIDDG 267 >gi|319938932|ref|ZP_08013296.1| amino acid ABC transporter [Streptococcus anginosus 1_2_62CV] gi|319811982|gb|EFW08248.1| amino acid ABC transporter [Streptococcus anginosus 1_2_62CV] Length = 277 Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 43/285 (15%), Positives = 91/285 (31%), Gaps = 18/285 (6%) Query: 1 MY-KDFFVSI--LCLIILFFTSFSTNASILG---DIKKRGFLKCGINTGLVGFAEVKANG 54 M K + ++I L +L + N + +++ + G + V + NG Sbjct: 1 MKIKRYVLAICSLISFLLLTACSNVNNPKVDNWSKYQQKKSITIGFDNTFVPMGFEQKNG 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + GFD+D A+ K+ + P++ + L + ID++ T R + Sbjct: 61 QYVGFDIDLANAVFKEYG---IKVNWQPIDWDMKETELTNGTIDLIWNGYSATDERRKKV 117 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKY 171 + Q + K I+ + + + Q G++ + K + Sbjct: 118 QFTI--PYMKNEQVLVAKKSSNIAKTADMKDKILGAQTGSSGYDEFEAHPELLKNLVKNH 175 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 ++ E + R D D ++ + P A Sbjct: 176 KAAQYQSFTEALIDLQNSRIDGLLIDRVYANYYLKEEGILPDYYVFPAGFDSESFAVGAR 235 Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNIN-QVSKDTTNPDVQR 275 + D + V + A + G QK N +D +V++ Sbjct: 236 KTDKQL---VENINQAFKKLYQTGQFQKIANKWFGEDIATDEVKK 277 >gi|301629487|ref|XP_002943871.1| PREDICTED: ABC transporter arginine-binding protein 1-like [Xenopus (Silurana) tropicalis] Length = 310 Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 36/275 (13%), Positives = 81/275 (29%), Gaps = 14/275 (5%) Query: 1 MYKDFFVSILCLIILFFTSF-------STNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M K ++L L + + + G++ Sbjct: 1 MKKFAIAALLTLGAVLAGCSREESAAPAATPVPAPAPVAVTRIVMGLDDNFPPMGFRDEK 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 + GFD+D + ++ ++++ P++ + L K++D+L T R + Sbjct: 61 NELVGFDIDMAKEVARR---QGLEVEFKPIDWSAKEAELSGKRVDVLWNGLTITEERRQN 117 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + + Q ++ I + + L+G + VQ G++ + + Sbjct: 118 ILF--TAPYMENHQIIVVPAGSAIKAKADLAGKVVGVQEGSSAVDAIKKEEAVYQSFKEL 175 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 F R DA D + + ++ +L D + + Sbjct: 176 KAFGDNVAALMDLTTGRLDAVVVD--EVVGRYYVAKKADQYAVLEDNFGTEAYGVGLRKD 233 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 DT + + M + I K T Sbjct: 234 DTALHGRIDKALADMKADGSAAKIAEQITSAPKRT 268 >gi|308234144|ref|ZP_07664881.1| amino acid ABC transporter substrate-binding protein, PAAT family [Atopobium vaginae DSM 15829] gi|328943631|ref|ZP_08241096.1| ABC superfamily ATP binding cassette transporter, binding protein [Atopobium vaginae DSM 15829] gi|327491600|gb|EGF23374.1| ABC superfamily ATP binding cassette transporter, binding protein [Atopobium vaginae DSM 15829] Length = 323 Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 54/260 (20%), Positives = 101/260 (38%), Gaps = 19/260 (7%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 ST AS + +K L+ G + FA + A+G +GFD L+ + D SK Sbjct: 74 STWASQVAKAQK---LRVGGVKTSILFASLDEADGKIRGFDAGLVSLLTRYVLGDESKSD 130 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGIS 138 + + R LQ++Q+D++ T R+ ++ A Y QG ++ + I+ Sbjct: 131 LTLVTSNTRESVLQNEQVDVVFATYSITDARKKAVSFA--GPYYSTQQGIMVAQSNTTIN 188 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 +S L+ ++ Q+G+T L F EE A R DAY D Sbjct: 189 GLSDLAQKNVAAQSGSTGPTILEQLAPEA----KVQEFTTDEEARNALSQGRVDAYVIDE 244 Query: 199 SALYALKLTNDRPSEHVILPDIISK-SPLAPAIIQGDTEWYNIVS----WTHYAMVTAEE 253 + + P ++ ++ + + +++ + V+ A + AE Sbjct: 245 TMQRGSIVR--NPGKYKLVGESFGPVDYYGIGLP-LNSDGVDFVNTFLKKVEDAGLWAEL 301 Query: 254 LGITQKNINQVSKDTTNPDV 273 + N + +K T P + Sbjct: 302 WKVAIGNRTEATKVPTPPSI 321 >gi|237654574|ref|YP_002890888.1| extracellular solute-binding protein family 3 [Thauera sp. MZ1T] gi|237625821|gb|ACR02511.1| extracellular solute-binding protein family 3 [Thauera sp. MZ1T] Length = 265 Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 73/218 (33%), Gaps = 8/218 (3%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 + G++ + GFD+D + + + +++ P++ + L Sbjct: 40 KIVIGLDDNFPPMGFRNEKNELVGFDIDLAKEAAKRLG---IAVEFKPIDWSAKEAELNG 96 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 K++D L T R ++G + Q ++ I + ++L+G I +Q G+ Sbjct: 97 KRVDALWNGLTITEERRKNIGFTSA--YMENHQIIVVPAASAIKTKAELAGKVIGIQDGS 154 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 + + A + K F R DA D + T +P+++ Sbjct: 155 SAVDAVQKDPVAASFK-ELKKFGDNVTALMDLTTGRLDAVVLD--EVVGRYYTAKKPNDY 211 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 V+L D + DT + M Sbjct: 212 VVLDDHFGTEEYGVGTRKDDTALLAKLQKAMDEMKADG 249 >gi|152969453|ref|YP_001334562.1| arginine 3rd transport system periplasmic binding protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238893924|ref|YP_002918658.1| arginine 3rd transport system periplasmic binding component [Klebsiella pneumoniae NTUH-K2044] gi|288936334|ref|YP_003440393.1| cationic amino acid ABC transporter periplasmic binding protein [Klebsiella variicola At-22] gi|290510610|ref|ZP_06549980.1| arginine transport system substrate-binding protein [Klebsiella sp. 1_1_55] gi|329998471|ref|ZP_08303108.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Klebsiella sp. MS 92-3] gi|150954302|gb|ABR76332.1| arginine 3rd transport system periplasmic binding protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238546240|dbj|BAH62591.1| arginine 3rd transport system periplasmic binding component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|288891043|gb|ADC59361.1| cationic amino acid ABC transporter, periplasmic binding protein [Klebsiella variicola At-22] gi|289777326|gb|EFD85324.1| arginine transport system substrate-binding protein [Klebsiella sp. 1_1_55] gi|328538661|gb|EGF64757.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Klebsiella sp. MS 92-3] Length = 250 Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 53/269 (19%), Positives = 97/269 (36%), Gaps = 32/269 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L +L S S +A+ ++ F V AN GFD Sbjct: 8 MKK-----VLIAALLAGMSLSASAAQ--------TIRFATEASYPPFELVDANNQIVGFD 54 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL I + + L+ ++ D + D T RE + + Sbjct: 55 VDLANALCKEIDATCT---FTNQAFDSLIPGLKFRRFDAVMAGMDITPEREKQVLFS--- 108 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+D + ++ +S+ QL G + VQ GTT + + D + + + ++ + Sbjct: 109 TPYYDNSALFVGQQGKFTSIDQLKGKKVGVQNGTTHQKFITD----KHPEITTVPYDSYQ 164 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R DA GD + + + P + + K+ L A+ QG+T+ Sbjct: 165 NAKLDLQNGRIDAVFGDTAVVTEWLKS--NPKLAAVGDKVTDKAYFGTGLGIAVRQGNTD 222 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVS 265 + A+ ++ G Q N+ Sbjct: 223 LQQKFN---AALEKVKKDGTYQTIYNKWF 248 >gi|114565876|ref|YP_753030.1| extracellular solute-binding protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114336811|gb|ABI67659.1| extracellular solute-binding protein, family 3 [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 255 Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 38/243 (15%), Positives = 79/243 (32%), Gaps = 10/243 (4%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 IK +G+ G++ + GFDVD + ++ + + +Q+ + + Sbjct: 21 KIKDKGYFVMGLDDAFPPMGFRDEANEIVGFDVDLAKEVAQRLGVE---VQFQSIVWDTK 77 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 L S ID++ T R+ D Q ++ I+S + L+G I Sbjct: 78 KEELNSGNIDVIWNGFTITEERKQDFLF--SKPYISDRQIIVVRADSDIASKADLAGKKI 135 Query: 149 CVQAGTTTELTL-ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 +QA ++ + AD +K + + FE + + + + Sbjct: 136 GIQAASSANEAVEADKETFEVIKDNLLQFESNDLALRDLKGG--GVEAVVVDEVVGRYYL 193 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 + P ++ +L D D ++ V M + +D Sbjct: 194 SKHPGDYKVLKDNFDLEDFGVGFRLDDKAFHAEVEKALDEMKADGTAAKISE--KWFGED 251 Query: 268 TTN 270 N Sbjct: 252 IIN 254 >gi|327393303|dbj|BAK10725.1| arginine-binding periplasmic protein 1 precursor ArtI [Pantoea ananatis AJ13355] Length = 246 Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 47/232 (20%), Positives = 82/232 (35%), Gaps = 13/232 (5%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 ++ F V AN +GFDVD AL + + + +L+ Sbjct: 25 TIRIATEASYPPFEFVDANNKIQGFDVDLANALCKEMDATCT---FTNQAFDSLIPSLKF 81 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 ++ D + D T RE + + Y+D + +K ++SV L G + VQ GT Sbjct: 82 RRFDAVMAGMDITPEREKQVLFSK---PYYDNSAIFVAQKGKVASVEALKGKRVGVQNGT 138 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR--PS 212 T + L D + + ++ + + R DA GD + + N P Sbjct: 139 THQKYLTD----KHADITVVPYDSYQNAVLDLKNGRIDAVFGDSAVVNEWLKQNANLAPV 194 Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQKNINQ 263 + + L A+ QG+TE + + + I K Q Sbjct: 195 GEKVTDKAYFGTGLGIAVRQGNTELQSKFNTALDKIKADGTYKTIYSKWFQQ 246 >gi|325978175|ref|YP_004287891.1| amino acid ABC transporter extracellular amino acid-binding protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325178103|emb|CBZ48147.1| amino acid ABC transporter, extracellular amino acid-binding protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 280 Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 41/277 (14%), Positives = 82/277 (29%), Gaps = 19/277 (6%) Query: 2 YKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 +K V L L+ + +T+ K G + G + V + Sbjct: 3 FKKVLVGALALVSTLTLAACSSLSSKKATSTDQWDTYVKNGEITIGFDNTFVPMGYEDED 62 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G GFD+D A+ +++ +N + L + ID++ T R Sbjct: 63 GSNVGFDIDLANAVFKEYG---ITVKWQSINWDMKETELNNGTIDLIWNGYSITDERAEK 119 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMK 170 + + Q + K GI+S + + + Q+G++ + K Sbjct: 120 VLF--TNPYMVNEQVLVTKKSSGITSFADMKDKVLGAQSGSSGYDAFTSNPEVLKDIVSG 177 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 +E + + R D D + I+ A Sbjct: 178 GDATQYETFTQALIDLKNDRIDGLLIDKVYANYYLEQEGELDNYNIISSEFDGEDFAVGA 237 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 + D +V + A + G Q+ N+ + Sbjct: 238 RKAD---KTLVKKINQAFKKLYQDGTFQEISNKWFGE 271 >gi|171185713|ref|YP_001794632.1| extracellular solute-binding protein [Thermoproteus neutrophilus V24Sta] gi|170934925|gb|ACB40186.1| extracellular solute-binding protein family 3 [Thermoproteus neutrophilus V24Sta] Length = 295 Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 47/250 (18%), Positives = 86/250 (34%), Gaps = 12/250 (4%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + + IKKRG L G + + V + G+D+D R ++ A+ +++ Sbjct: 55 AACPVSVDVIKKRGKLIVGTDATWPPWEWVMGD-KIVGWDIDIAREIAKALG---VQLEI 110 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GIS 138 + A++ +D+ WT RE L + Y+ ++ K I+ Sbjct: 111 RDMRFAGLLEAVRKGDVDLAISAITWTSEREKVLEFSM---PYYRESIVVVTKASRTDIN 167 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 V L G ++ VQ GTT E A + + + + DA D Sbjct: 168 KVEDLYGKTVGVQIGTTHEEWAAANLEKPGKATVRRYDKVYPYMVEVLKRGDVDAIILDR 227 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-IT 257 S AL P + S ++ A+ + + +V + +L I Sbjct: 228 SIATALVKKF--PDLKIAFEIPGSAGYISVAMPKCAQDLKLVVDQVIENLTQTGKLDEIF 285 Query: 258 QKNINQVSKD 267 Q+N Sbjct: 286 QRNFELFLGS 295 >gi|327394609|dbj|BAK12031.1| lysine-arginine-ornithine-binding periplasmic protein precursor ArgT [Pantoea ananatis AJ13355] Length = 260 Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 47/269 (17%), Positives = 85/269 (31%), Gaps = 24/269 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L L + S ++ G + F A G GFD Sbjct: 1 MKKRVLALSLMLGLSSAASVFAAVPT--------SIRVGTDPTYPPFESKNAQGQLVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + I +K Y+ + +L++K+ID + + T R+ + + + Sbjct: 53 IDLANEICKRI---QTKCTYVESDFDALIPSLKAKKIDAIISSLSITAKRQEEIAFSDK- 108 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + K I + L G +I V GTT E +Y++ + P + + Sbjct: 109 -LYAANARLVAPKGSKIEPTPEALKGKNIGVLQGTTQETYANEYWRPKGVTVTPYANQDL 167 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + A R DA D L + + + + + D Sbjct: 168 --VYQDLTAGRIDAAFQDEVQAAEGFLKQPVGKSYAFAGPAVKDDKIFGVGTGMGLRKDD 225 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQ 263 TE + A + + G K + Sbjct: 226 TELKAAID---KAFESMRKDGTYDKIAKK 251 >gi|310287551|ref|YP_003938809.1| solute binding protein of ABC transporter system [Bifidobacterium bifidum S17] gi|309251487|gb|ADO53235.1| solute binding protein of ABC transporter system [Bifidobacterium bifidum S17] Length = 304 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 42/261 (16%), Positives = 89/261 (34%), Gaps = 17/261 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF---------LKCGINTGLVGFAEVK 51 M + F + L ++ S + S G + G+ + G V Sbjct: 15 MRR--FSAALAAVLWTAGSLTACGSSSSRDDANGVSIRQPEGPTVSIGVASDQPGLG-VW 71 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 NG + GFDVD R ++ A+ +I + P+ + R L+S Q+D++ + T E Sbjct: 72 HNGGYSGFDVDVARYVAKALGYADKQIVFKPVTPRSRVSMLESAQVDMVVSSFGITERHE 131 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 ++ + + I+ + ++G CV AG+ + D ++ + Sbjct: 132 SAVTMTGPYLIVRQDLLVRAADAGDITGIKDMNGRKACVVAGS----DVTDAVRSQAPEA 187 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + + + DA + L L ++ + A+ Sbjct: 188 SIEERDDYGQCLTSLLIGDVDAVAAGDAILTGLATVKGN-GYVQVVGAPFGEERYGIAVK 246 Query: 232 QGDTEWYNIVSWTHYAMVTAE 252 G+T+ + + M+ Sbjct: 247 HGNTQLADSIGDILSDMIDDG 267 >gi|146308593|ref|YP_001189058.1| cationic amino acid ABC transporter, periplasmic binding protein [Pseudomonas mendocina ymp] gi|145576794|gb|ABP86326.1| L-ornithine-binding protein / L-arginine-binding protein [Pseudomonas mendocina ymp] Length = 258 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 50/267 (18%), Positives = 95/267 (35%), Gaps = 23/267 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ + L ++ + F+ + L+ GI FA +ANG+ GFD Sbjct: 1 MKKIAWLGAIALSLIASSPFAADKP----------LRLGIEAAYPPFAYKEANGEIAGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + + + Q++ +L+ K++D + + T R S+ + Sbjct: 51 VDIGNALCAEM---KVQCQWVEQEFDGLIPSLKVKKVDAILSSMTITDERRKSVDFTGK- 106 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y+ +M + + + L G I VQ TTT+ + A + + Sbjct: 107 -YYYSPARLVMKEGSTVDADFANLKGKRIGVQRATTTDRFASSVMAAQG--VQVVRYSSQ 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 EI + R D D + L + + A+ +GD Sbjct: 164 NEIYLDLISGRLDGTLADAIPVEEGFLKTPNGKGFAFVGPSFTDPAYFGEGAGIAVRKGD 223 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNI 261 +E ++ A+ + E Q+ Sbjct: 224 SELLGKLNAAIAAIRASGEYQQIQQRY 250 >gi|89901740|ref|YP_524211.1| extracellular solute-binding protein [Rhodoferax ferrireducens T118] gi|89346477|gb|ABD70680.1| extracellular solute-binding protein, family 3 [Rhodoferax ferrireducens T118] Length = 262 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 40/252 (15%), Positives = 79/252 (31%), Gaps = 7/252 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L+ + + G++ + GFD Sbjct: 1 MKKHVLWLMAGLMGAIVLTGCGKKEAPAAPAPAKAIVIGLDDNFPPMGFRDDKNELIGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + + + P++ + L +ID+L T R+ ++ Sbjct: 61 IDLAKEAGKRLG---VAVNFKPIDWNAKEAELNGNRIDVLWNGLTITEERKANILF--TK 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Q ++ +K I++ +QL+GA + VQ G++ + F Sbjct: 116 PYLENRQIIVVTEKSPIATKAQLAGAVVGVQDGSSAVEAIQKDAATAKSIKELKKFGDNV 175 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A R DA D + T +P E+ +L D + DTE Sbjct: 176 TALMDLSAGRLDALVVD--EIVGRYYTGKKPGEYRVLEDNFGTEDYGVGTRKSDTELSAR 233 Query: 241 VSWTHYAMVTAE 252 ++ M Sbjct: 234 LNKALDDMKADG 245 >gi|256027993|ref|ZP_05441827.1| cyclohexadienyl dehydratase [Fusobacterium sp. D11] gi|289765938|ref|ZP_06525316.1| cyclohexadienyl dehydratase [Fusobacterium sp. D11] gi|289717493|gb|EFD81505.1| cyclohexadienyl dehydratase [Fusobacterium sp. D11] Length = 253 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 48/265 (18%), Positives = 98/265 (36%), Gaps = 18/265 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V ++ ++ + N + I KRG L G + F + NG+ K +D Sbjct: 1 MKKILIVLLIAIVSVISY---ANNDGVEKILKRGVLYVGTTSDYKPFTYI-ENGEHKSYD 56 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ + ++ + K++++P K LQ+ + DI T R+ Sbjct: 57 IEVAKLIAKELG---VKVEFVPTTWKTLLDDLQAGKFDIAMGGITRTTKRQA--ICNMTN 111 Query: 121 ITYFDGQGFIMHK--KKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 G+ F++ K K +S+ ++ + V G T E + +Y I + Sbjct: 112 PYLVFGKCFLVRKGDKNKYNSLEAVNKPNVRVGVNIGGTNEALVNEYITKA----TVIRY 167 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + ++ A D + + N + E +L ++KS + I + + Sbjct: 168 KNNLDVPVALEKGEVDVMITETPEAITYQKNNPK-LEGALLDKTLTKSQMGYMIAKENQH 226 Query: 237 WYNIVSWTHYAMVTAEELGITQKNI 261 N V++ + E+ QK Sbjct: 227 LLNTVNFILSELELRGEIEKLQKKY 251 >gi|114566597|ref|YP_753751.1| glutamine ABC transporter glutamine-binding protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337532|gb|ABI68380.1| glutamine ABC transporter, glutamine-binding protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 263 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 54/272 (19%), Positives = 98/272 (36%), Gaps = 19/272 (6%) Query: 1 MYKD-------FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M K ++ L + ++ + N + ++G L G F + + Sbjct: 1 MKKWIKVLMVGLLITGLLVTVIGCKAQQNNNDSAQE-SQKGKLIVGTEATFPPFEMI-KD 58 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G++ GFD+D RA+ + +++ L A+QS ID + R Sbjct: 59 GEYSGFDMDIIRAIGKS---QGYEVEIKNLGFDALIPAVQSGNIDCVIAAVTIDEDRAKV 115 Query: 114 LGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 + + YFD I K GI++ L G I Q GTT T K + Sbjct: 116 VDFSQ---PYFDAGLIIAVKQETTGITTTKDLQGKRIAAQVGTTGADTCLK-IKDKDPST 171 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + +FE V E + DA D T+ S ++ + S A+ Sbjct: 172 NVKIFESVGEAFMELQKGGVDAVINDHPVTADYIKTSGNDSVKMVGEVFSADSQYGIAVK 231 Query: 232 QGDTEWYNIVSWTHYAMVTAEE-LGITQKNIN 262 +G+++ N ++ + + E I +K + Sbjct: 232 KGNSKLLNDINAGLDELKASGEYEQIYKKWFD 263 >gi|237732152|ref|ZP_04562633.1| arginine-binding periplasmic protein 1 [Citrobacter sp. 30_2] gi|283832472|ref|ZP_06352213.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Citrobacter youngae ATCC 29220] gi|226907691|gb|EEH93609.1| arginine-binding periplasmic protein 1 [Citrobacter sp. 30_2] gi|291072131|gb|EFE10240.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Citrobacter youngae ATCC 29220] Length = 243 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 50/269 (18%), Positives = 93/269 (34%), Gaps = 32/269 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ T ++ F + AN GFD Sbjct: 1 MKKVLIAALIAGFSLSATAAQT-------------IRFATEASYPPFESIDANNKIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL I + + +L+ ++ D + D T RE + Sbjct: 48 VDLANALCKEIDATCT---FTNQAFDSLIPSLKFRRFDAVMAGMDITPEREKQVLFT--- 101 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+D + ++ +S+ QL G + VQ GTT + + D + + + ++ + Sbjct: 102 TPYYDNSALFVGQQGKYTSIDQLKGKKVGVQNGTTHQKFIMD----KHPEVTTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + D P + + K L A+ QG+TE Sbjct: 158 NAKLDLQNGRIDGVFGDTAVVTEWLK--DNPKLAAVGDKVTDKDYFGTGLGIAVRQGNTE 215 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVS 265 + A+ ++ G + N+ Sbjct: 216 LQQKFN---AALEKVKKDGTYETIYNKWF 241 >gi|53723354|ref|YP_112339.1| glutamine ABC transporter periplasmic protein [Burkholderia pseudomallei K96243] gi|76818697|ref|YP_336644.1| glutamine ABC transporter periplasmic protein [Burkholderia pseudomallei 1710b] gi|126457176|ref|YP_001077187.1| glutamine ABC transporter periplasmic protein [Burkholderia pseudomallei 1106a] gi|134281791|ref|ZP_01768498.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia pseudomallei 305] gi|167725482|ref|ZP_02408718.1| glutamine ABC transporter periplasmic protein [Burkholderia pseudomallei DM98] gi|167821597|ref|ZP_02453277.1| glutamine ABC transporter periplasmic protein [Burkholderia pseudomallei 91] gi|167829941|ref|ZP_02461412.1| glutamine ABC transporter periplasmic protein [Burkholderia pseudomallei 9] gi|167851398|ref|ZP_02476906.1| glutamine ABC transporter periplasmic protein [Burkholderia pseudomallei B7210] gi|167900040|ref|ZP_02487441.1| glutamine ABC transporter periplasmic protein [Burkholderia pseudomallei 7894] gi|167908343|ref|ZP_02495548.1| glutamine ABC transporter periplasmic protein [Burkholderia pseudomallei NCTC 13177] gi|167916697|ref|ZP_02503788.1| glutamine ABC transporter periplasmic protein [Burkholderia pseudomallei 112] gi|167924542|ref|ZP_02511633.1| glutamine ABC transporter periplasmic protein [Burkholderia pseudomallei BCC215] gi|226199303|ref|ZP_03794863.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia pseudomallei Pakistan 9] gi|242313028|ref|ZP_04812045.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia pseudomallei 1106b] gi|254182414|ref|ZP_04889008.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia pseudomallei 1655] gi|254186971|ref|ZP_04893486.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia pseudomallei Pasteur 52237] gi|254192568|ref|ZP_04899007.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia pseudomallei S13] gi|254265600|ref|ZP_04956465.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia pseudomallei 1710a] gi|254296639|ref|ZP_04964095.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia pseudomallei 406e] gi|52213768|emb|CAH39823.1| glutamine-binding periplasmic protein precursor [Burkholderia pseudomallei K96243] gi|76583170|gb|ABA52644.1| glutamine-binding periplasmic protein precursor [Burkholderia pseudomallei 1710b] gi|126230944|gb|ABN94357.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia pseudomallei 1106a] gi|134246853|gb|EBA46940.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia pseudomallei 305] gi|157806490|gb|EDO83660.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia pseudomallei 406e] gi|157934654|gb|EDO90324.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia pseudomallei Pasteur 52237] gi|169649326|gb|EDS82019.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia pseudomallei S13] gi|184212949|gb|EDU09992.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia pseudomallei 1655] gi|225928710|gb|EEH24737.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia pseudomallei Pakistan 9] gi|242136267|gb|EES22670.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia pseudomallei 1106b] gi|254216602|gb|EET05987.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia pseudomallei 1710a] Length = 250 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 46/267 (17%), Positives = 91/267 (34%), Gaps = 25/267 (9%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + F +I+ L ++ ++ +A L G +T + F + + + GFD+ Sbjct: 3 RRSFIKTIVALALVGASAAGAHA---------KELVVGTDTSFMPFEFKQGD-KYVGFDL 52 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D ++ + P++ ALQ++ ID+ R ++ Sbjct: 53 DLWAEIAK---GAGWTYKIQPMDFAGLIPALQTQNIDVALSGMTIKEERRKAIDF--SDP 107 Query: 122 TYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G ++ I S+ L+G I + GT T D+ KAH F ++ Sbjct: 108 YYDSGLAAMVQANNTTIKSIDDLNGKVIAAKTGTATI----DWIKAHLKPKEIRQFPNID 163 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A A R DA D + + N+ + +S +G + Sbjct: 164 QAYLALEAGRVDAAMHDTPNVL-FFVNNEGKGRVKVAGAPVSGDKYGIGFPKGSP----L 218 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKD 267 V+ + + + G K + Sbjct: 219 VAKVNAELARMKADGRYAKIYKKWFGS 245 >gi|114705497|ref|ZP_01438400.1| hypothetical protein FP2506_13564 [Fulvimarina pelagi HTCC2506] gi|114538343|gb|EAU41464.1| hypothetical protein FP2506_13564 [Fulvimarina pelagi HTCC2506] Length = 292 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 54/260 (20%), Positives = 97/260 (37%), Gaps = 15/260 (5%) Query: 11 CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70 + F T+ L + L G N G V + NG+ GF+V+ + ++S Sbjct: 34 LFALTFATAGFAVTPSLAE-----MLTAGANVGNVPWEFQDENGEITGFEVELLQEVASR 88 Query: 71 IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130 + + IQ +P N F A+QS +ID+ + T R S+ A Y Q Sbjct: 89 LDYEGVDIQNIPFNG--LFSAVQSGRIDVAISSITITDERLQSVSFAQ--PYYDSDQSLS 144 Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190 GISS L G ++ V G+T ++ ++ + +E + A R Sbjct: 145 TRTDSGISSTQDLEGKTVGVDTGSTGDMYASEREADWGLA-GISRYEGLNPAMLDLAAGR 203 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 DAY DI A+ + ++ + + + + D+E + + Sbjct: 204 IDAYVSDIPAVAYY---LRDKPDMEVVERLKTGEQYSMMFAK-DSELAAKANEVLTTLKN 259 Query: 251 AEELG-ITQKNINQVSKDTT 269 + + +K +DTT Sbjct: 260 EGYIASLHEKWFGTAPEDTT 279 >gi|317122404|ref|YP_004102407.1| extracellular solute-binding protein family 3 [Thermaerobacter marianensis DSM 12885] gi|315592384|gb|ADU51680.1| extracellular solute-binding protein family 3 [Thermaerobacter marianensis DSM 12885] Length = 296 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 48/246 (19%), Positives = 89/246 (36%), Gaps = 20/246 (8%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 S+L +IK+RG++ + G+ GFD+D +A++ + + + Sbjct: 65 SLLDEIKERGYMTFATDGAYPPMEFPDPENPGELIGFDIDLGKAIAEKLGVE---YRVEV 121 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSV 140 + L++++ D + + T R+ S + GQ ++ K GI S+ Sbjct: 122 AEWEGLLAGLEARRFDAVMSAMNITEERQKSADFVQ---YFEMGQMIVVPKGNPQGIQSL 178 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L G I VQ GTT E A ++ + A R DA D Sbjct: 179 DDLKGKVIAVQIGTTNEEIARGIEGA-----TVKTYQTFPDALQEVAAGRADATILDEPV 233 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 E+V +P +P+ A+ +G+ E V A+ ++ G + Sbjct: 234 ARYYANIEGDKYEYVGVP--FETAPVGIALPKGEDELVQAVQ---QALDQLKQDGTYDQI 288 Query: 261 INQVSK 266 + Sbjct: 289 YAKWFG 294 >gi|46204163|ref|ZP_00050410.2| COG0834: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Magnetospirillum magnetotacticum MS-1] Length = 253 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 29/155 (18%), Positives = 60/155 (38%), Gaps = 6/155 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD----DPSKIQY 80 L +K+RG L G V F+ + N G+ + C ++ A+ D +++ Sbjct: 93 GTLRKVKERGALTLGYRDASVPFSYLDGNQKPVGYAYEICLKVAEAVKAHLKLDQLEVKL 152 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 P+ + R + + ID+ +T R+ + F+ K+KG+ Sbjct: 153 NPVTSATRIPLIANGTIDLECGSTTNNADRQRQAAF--TNTHFLTATRFVAKKEKGLDRT 210 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 L G ++ +GTT+ + + A + + Sbjct: 211 DDLKGRTVVSTSGTTSIRQINEINAARGLGMRILP 245 >gi|311280311|ref|YP_003942542.1| cationic amino acid ABC transporter, periplasmic binding protein [Enterobacter cloacae SCF1] gi|308749506|gb|ADO49258.1| cationic amino acid ABC transporter, periplasmic binding protein [Enterobacter cloacae SCF1] Length = 248 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 52/268 (19%), Positives = 89/268 (33%), Gaps = 24/268 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M VS+ L + F S L +T V F + + + GFD Sbjct: 1 MKSVLKVSLAALTLAFAVSSQAANKQL---------VVATDTAFVPFEFKQGD-KYVGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A++ + D P++ ALQ+K +D+ T R+ ++ + Sbjct: 51 VDLWAAIAKELKLD---YTMKPMDFSGIIPALQTKNVDVALAGITITDERKKAIDFSDG- 106 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G ++ I SV L G + V++GT + DY KA+ F + Sbjct: 107 -YYKSGLLVMVKANNNDIKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNI 161 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + +R DA D + T + + + + A +G E Sbjct: 162 DNAYMELGTNRADAVLHDTPNILYFIKTAGN-GQFKAVGESLEAQQYGIAFPKGSDELRE 220 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKD 267 V+ T E G + + Sbjct: 221 KVNGALK---TLRENGTYNEIYKKWFGT 245 >gi|170758226|ref|YP_001787409.1| polar amino acid ABC transporter amino acid-binding protein [Clostridium botulinum A3 str. Loch Maree] gi|169405215|gb|ACA53626.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum A3 str. Loch Maree] Length = 272 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 49/286 (17%), Positives = 100/286 (34%), Gaps = 33/286 (11%) Query: 1 MYKDFF-------VSILCLIILFF----TSFSTNASILGDIKKRGFLKCGINTGLVGFAE 49 M K +S+ +I L T+ + S + IK+ G L G + Sbjct: 1 MNKKILGKLGAIIISLTMIISLVACGKNTASNEGKSKVDKIKESGKLVVGTCADYPPYEF 60 Query: 50 ---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 + + GFD+ + ++ + K++ + ALQS +DI+ + Sbjct: 61 HKTINGKDEIVGFDITIAKEIAKDLG---VKLEIKDMKFDGLLAALQSGNVDIVIAGMNP 117 Query: 107 TLLREISLGLAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYF 164 T R+ S+ I Y Q ++ K S+ + G I VQ GTT E + Sbjct: 118 TEDRKKSVDF--SKIYYQAIQSVVVRAEDKDKFKSLDEFKGKKIGVQKGTTQE----EVA 171 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 K +V ++ + + D + + + I + K Sbjct: 172 KKEMTNSEIKSLGKVTDLVLELQNKKVDGLVLENPVAVSYAKNGKNLAVSNIKFENKDK- 230 Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 + A+ +G+ + + + T ++ +K+I++ D + Sbjct: 231 GASVAVKKGNKDLVDAIDKTLDKLIK-------EKSIDKFVTDASK 269 >gi|16128831|ref|NP_415384.1| arginine transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|74311407|ref|YP_309826.1| arginine 3rd transport system periplasmic binding protein [Shigella sonnei Ss046] gi|82543351|ref|YP_407298.1| arginine 3rd transport system periplasmic binding protein [Shigella boydii Sb227] gi|89107714|ref|AP_001494.1| arginine transporter subunit [Escherichia coli str. K-12 substr. W3110] gi|157156637|ref|YP_001462061.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli E24377A] gi|157160386|ref|YP_001457704.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli HS] gi|170080522|ref|YP_001729842.1| arginine ABC transporter periplasmic-binding protein [Escherichia coli str. K-12 substr. DH10B] gi|187732757|ref|YP_001880940.1| arginine ABC transporter periplasmic arginine-binding protein ArtI [Shigella boydii CDC 3083-94] gi|188494716|ref|ZP_03001986.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli 53638] gi|191166170|ref|ZP_03028004.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli B7A] gi|193064432|ref|ZP_03045513.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli E22] gi|194438380|ref|ZP_03070470.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli 101-1] gi|209918112|ref|YP_002292196.1| arginine ABC transporter substrate binding component [Escherichia coli SE11] gi|218553449|ref|YP_002386362.1| arginine ABC transporter periplasmic-binding protein [Escherichia coli IAI1] gi|218694337|ref|YP_002402004.1| arginine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli 55989] gi|238900122|ref|YP_002925918.1| arginine transporter subunit [Escherichia coli BW2952] gi|253774107|ref|YP_003036938.1| cationic amino acid ABC transporter periplasmic binding protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254160978|ref|YP_003044086.1| arginine transporter subunit [Escherichia coli B str. REL606] gi|256021016|ref|ZP_05434881.1| arginine transporter subunit [Shigella sp. D9] gi|256023510|ref|ZP_05437375.1| arginine transporter subunit [Escherichia sp. 4_1_40B] gi|260843114|ref|YP_003220892.1| arginine 3rd transport system periplasmic binding protein ArtI [Escherichia coli O103:H2 str. 12009] gi|260854155|ref|YP_003228046.1| arginine 3rd transport system periplasmic binding protein ArtI [Escherichia coli O26:H11 str. 11368] gi|260867036|ref|YP_003233438.1| arginine 3rd transport system periplasmic binding protein ArtI [Escherichia coli O111:H- str. 11128] gi|293414144|ref|ZP_06656793.1| arginine transport system substrate-binding protein [Escherichia coli B185] gi|293433161|ref|ZP_06661589.1| arginine-binding periplasmic protein 1 [Escherichia coli B088] gi|297516292|ref|ZP_06934678.1| arginine 3rd transport system periplasmic binding protein ArtI [Escherichia coli OP50] gi|300817037|ref|ZP_07097256.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 107-1] gi|300824004|ref|ZP_07104126.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 119-7] gi|300902396|ref|ZP_07120379.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 84-1] gi|300921106|ref|ZP_07137490.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 115-1] gi|300924472|ref|ZP_07140442.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 182-1] gi|300929327|ref|ZP_07144801.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 187-1] gi|300947046|ref|ZP_07161268.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 116-1] gi|300957067|ref|ZP_07169312.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 175-1] gi|301027623|ref|ZP_07190944.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 196-1] gi|301305365|ref|ZP_07211460.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 124-1] gi|301325871|ref|ZP_07219304.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 78-1] gi|301646303|ref|ZP_07246193.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 146-1] gi|307137491|ref|ZP_07496847.1| arginine 3rd transport system periplasmic binding protein ArtI [Escherichia coli H736] gi|307311749|ref|ZP_07591389.1| cationic amino acid ABC transporter, periplasmic binding protein [Escherichia coli W] gi|309795342|ref|ZP_07689760.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 145-7] gi|331641384|ref|ZP_08342519.1| arginine-binding periplasmic protein 1 [Escherichia coli H736] gi|331667237|ref|ZP_08368102.1| arginine-binding periplasmic protein 1 [Escherichia coli TA271] gi|331676651|ref|ZP_08377347.1| arginine-binding periplasmic protein 1 [Escherichia coli H591] gi|2507362|sp|P30859|ARTI_ECOLI RecName: Full=Putative ABC transporter arginine-binding protein 2; Flags: Precursor gi|1651396|dbj|BAA35577.1| arginine transporter subunit [Escherichia coli str. K12 substr. W3110] gi|1787088|gb|AAC73950.1| arginine transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|73854884|gb|AAZ87591.1| arginine 3rd transport system periplasmic binding protein [Shigella sonnei Ss046] gi|81244762|gb|ABB65470.1| arginine 3rd transport system periplasmic binding protein [Shigella boydii Sb227] gi|157066066|gb|ABV05321.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli HS] gi|157078667|gb|ABV18375.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli E24377A] gi|169888357|gb|ACB02064.1| arginine transporter subunit; periplasmic-binding component of ABC superfamily [Escherichia coli str. K-12 substr. DH10B] gi|187429749|gb|ACD09023.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Shigella boydii CDC 3083-94] gi|188489915|gb|EDU65018.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli 53638] gi|190903779|gb|EDV63494.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli B7A] gi|192928894|gb|EDV82507.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli E22] gi|194422604|gb|EDX38601.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli 101-1] gi|209911371|dbj|BAG76445.1| arginine ABC transporter substrate binding component [Escherichia coli SE11] gi|218351069|emb|CAU96773.1| arginine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli 55989] gi|218360217|emb|CAQ97767.1| arginine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli IAI1] gi|238860009|gb|ACR62007.1| arginine transporter subunit [Escherichia coli BW2952] gi|242376679|emb|CAQ31391.1| artI, subunit of arginine ABC transporter [Escherichia coli BL21(DE3)] gi|253325151|gb|ACT29753.1| cationic amino acid ABC transporter, periplasmic binding protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972879|gb|ACT38550.1| arginine transporter subunit [Escherichia coli B str. REL606] gi|253977093|gb|ACT42763.1| arginine transporter subunit [Escherichia coli BL21(DE3)] gi|257752804|dbj|BAI24306.1| arginine 3rd transport system periplasmic binding protein ArtI [Escherichia coli O26:H11 str. 11368] gi|257758261|dbj|BAI29758.1| arginine 3rd transport system periplasmic binding protein ArtI [Escherichia coli O103:H2 str. 12009] gi|257763392|dbj|BAI34887.1| arginine 3rd transport system periplasmic binding protein ArtI [Escherichia coli O111:H- str. 11128] gi|260449990|gb|ACX40412.1| cationic amino acid ABC transporter, periplasmic binding protein [Escherichia coli DH1] gi|291323980|gb|EFE63402.1| arginine-binding periplasmic protein 1 [Escherichia coli B088] gi|291434202|gb|EFF07175.1| arginine transport system substrate-binding protein [Escherichia coli B185] gi|299879259|gb|EFI87470.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 196-1] gi|300316152|gb|EFJ65936.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 175-1] gi|300405543|gb|EFJ89081.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 84-1] gi|300411957|gb|EFJ95267.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 115-1] gi|300419357|gb|EFK02668.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 182-1] gi|300453329|gb|EFK16949.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 116-1] gi|300462746|gb|EFK26239.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 187-1] gi|300523515|gb|EFK44584.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 119-7] gi|300530389|gb|EFK51451.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 107-1] gi|300839383|gb|EFK67143.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 124-1] gi|300847385|gb|EFK75145.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 78-1] gi|301075460|gb|EFK90266.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 146-1] gi|306908304|gb|EFN38803.1| cationic amino acid ABC transporter, periplasmic binding protein [Escherichia coli W] gi|308120992|gb|EFO58254.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 145-7] gi|309701141|emb|CBJ00439.1| arginine ABC transporter, substrate-binding protein [Escherichia coli ETEC H10407] gi|315060148|gb|ADT74475.1| arginine transporter subunit [Escherichia coli W] gi|315135512|dbj|BAJ42671.1| arginine transporter subunit [Escherichia coli DH1] gi|315257899|gb|EFU37867.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 85-1] gi|315619870|gb|EFV00389.1| arginine-binding periplasmic protein 1 [Escherichia coli 3431] gi|320175303|gb|EFW50409.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtI [Shigella dysenteriae CDC 74-1112] gi|323155763|gb|EFZ41932.1| arginine-binding periplasmic protein 1 [Escherichia coli EPECa14] gi|323159685|gb|EFZ45664.1| arginine-binding periplasmic protein 1 [Escherichia coli E128010] gi|323165796|gb|EFZ51582.1| arginine-binding periplasmic protein 1 [Shigella sonnei 53G] gi|323172170|gb|EFZ57808.1| arginine-binding periplasmic protein 1 [Escherichia coli LT-68] gi|323175515|gb|EFZ61110.1| arginine-binding periplasmic protein 1 [Escherichia coli 1180] gi|323185173|gb|EFZ70538.1| arginine-binding periplasmic protein 1 [Escherichia coli 1357] gi|323379294|gb|ADX51562.1| cationic amino acid ABC transporter, periplasmic binding protein [Escherichia coli KO11] gi|323942780|gb|EGB38945.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli E482] gi|323947113|gb|EGB43124.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli H120] gi|323962976|gb|EGB58548.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli H489] gi|324015939|gb|EGB85158.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 117-3] gi|324116077|gb|EGC10001.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli E1167] gi|331038182|gb|EGI10402.1| arginine-binding periplasmic protein 1 [Escherichia coli H736] gi|331065593|gb|EGI37486.1| arginine-binding periplasmic protein 1 [Escherichia coli TA271] gi|331075340|gb|EGI46638.1| arginine-binding periplasmic protein 1 [Escherichia coli H591] gi|332097032|gb|EGJ02015.1| arginine-binding periplasmic protein 1 [Shigella boydii 3594-74] gi|332104595|gb|EGJ07941.1| arginine transporter subunit [Shigella sp. D9] Length = 243 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 50/269 (18%), Positives = 96/269 (35%), Gaps = 32/269 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ T ++ F + AN GFD Sbjct: 1 MKKVLIAALIAGFSLSATAAET-------------IRFATEASYPPFESIDANNQIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL I + + +L+ ++++ + D T RE + Sbjct: 48 VDLAQALCKEIDATCT---FSNQAFDSLIPSLKFRRVEAVMAGMDITPEREKQVLFT--- 101 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+D + ++ +SV QL G + VQ GTT + + D + + + ++ + Sbjct: 102 TPYYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFIMD----KHPEITTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + D P + + K L A+ QG+TE Sbjct: 158 NAKLDLQNGRIDGVFGDTAVVTEWLK--DNPKLAAVGDKVTDKDYFGTGLGIAVRQGNTE 215 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVS 265 ++ A+ ++ G + N+ Sbjct: 216 LQQKLN---TALEKVKKDGTYETIYNKWF 241 >gi|224476916|ref|YP_002634522.1| hypothetical protein Sca_1432 [Staphylococcus carnosus subsp. carnosus TM300] gi|222421523|emb|CAL28337.1| conserved hypothetical protein [Staphylococcus carnosus subsp. carnosus TM300] Length = 491 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 45/278 (16%), Positives = 98/278 (35%), Gaps = 24/278 (8%) Query: 4 DFFVSILCLIILFFTSFSTNAS---------ILGDIKKRGFLKCGINTGLVGF---AEVK 51 V++ CL++ F F + S +IKKRG LK G++ + Sbjct: 8 KTLVTVTCLLLSFALVFGSLGSKVNAAVQDKTWEEIKKRGVLKVGLSADYAPLEFESHKN 67 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 ++ G D+D + ++ + K++ + +N AL++ +ID++ T R+ Sbjct: 68 GKREYVGIDIDIAKKIAKD---NGLKLEIVNMNFDSLLGALKTGKIDMIISGMTPTPERK 124 Query: 112 ISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 + + GQ ++ K S+ + I Q TT E + K Sbjct: 125 KEVDFSDS--YLKSGQTMVVKKTNIDKYKSLKDFANKRIGAQKQTTQE----ELAKNEIE 178 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 R+ E+ A ++ + D + A N + K A Sbjct: 179 NADIQSMTRLPEVIMALKSGKTDGAIIEGPVAEAYLQQNPELGFAKVKFSEPDKDT-CIA 237 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 + + + + ++ + + + +++ Q +D Sbjct: 238 LPKESPIFLDKLNTSIKDIKDKGLITKYKESAAQAMED 275 >gi|238019430|ref|ZP_04599856.1| hypothetical protein VEIDISOL_01299 [Veillonella dispar ATCC 17748] gi|237864129|gb|EEP65419.1| hypothetical protein VEIDISOL_01299 [Veillonella dispar ATCC 17748] Length = 268 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 49/263 (18%), Positives = 83/263 (31%), Gaps = 18/263 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDV 61 K + C++++ T S L G N V F + GFD+ Sbjct: 7 KKLIIGG-CMLVMAGTVIGGCGSSTQT--TSNKLIVGTNATFVPFEFKDEKTQDYTGFDI 63 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D RA+ I D ++ + AL + ID+ + T R + Sbjct: 64 DLIRAIGKRINKD---VELKNVAFDALIPALNTHDIDVAASGMTITKARSEKVLF--SSP 118 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y + + I+S+ L G I Q GTT F+ E Sbjct: 119 YYENALAVVYKDGANITSLDDLKGKKIAAQLGTTGADLAHKI-----EGTTVKEFDHSNE 173 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV-ILPDIISKSPLAPAIIQGDTEWYNI 240 + DA D+ A + P +H+ + +K L AI + + + Sbjct: 174 ALLELQNGGADATVIDLPV--AQFYSTKHPDQHIKFMAYPNTKEYLGLAINKDNKDLQEQ 231 Query: 241 VSWTHYAMVTAEELG-ITQKNIN 262 ++ M E + +K N Sbjct: 232 INKAIADMKADGEFNTLYKKWFN 254 >gi|271962801|ref|YP_003336997.1| serine/threonine protein kinase-like protein [Streptosporangium roseum DSM 43021] gi|270505976|gb|ACZ84254.1| Serine/threonine protein kinase-like protein [Streptosporangium roseum DSM 43021] Length = 751 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 48/246 (19%), Positives = 88/246 (35%), Gaps = 14/246 (5%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 ++ +T AS+ K G L G+ L G A + + G W GF+VD ++ A+ S Sbjct: 499 SAPATFASVADKAAKTGRLTVGMRDFLPGVA-LNSGGRWSGFEVDLATEIAKALGVPASG 557 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 + + + +ER L S +D++ + + F Y ++ I Sbjct: 558 VTFRATSREERPGLLASGDLDLVVSTYSINDKDD----VTFAGPYYLAHVDVLVKDGSPI 613 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 S + L G +C AG+ + L + + + A DA GD Sbjct: 614 VSAAGLEGKRVCQPAGSGSVRALQ----GEVDRLVLVPADTYTGCMNKLLAGEVDAVPGD 669 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 L N + ++ ++ A A+ +GD V + E G Sbjct: 670 DLVLAGF--GNRESIGYKVVGLKLTDERYAVAMKKGDRRTCKAVQGVIADLY---ESGTM 724 Query: 258 QKNINQ 263 K +++ Sbjct: 725 AKLLDR 730 >gi|161505143|ref|YP_001572255.1| hypothetical protein SARI_03280 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160866490|gb|ABX23113.1| hypothetical protein SARI_03280 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 246 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 45/264 (17%), Positives = 92/264 (34%), Gaps = 28/264 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L + + S S I L G + + V A+ GFD Sbjct: 1 MKKKLIAMLLASLSVHAASVSA------KI-----LHFGTSATYAPYEFVDADNKIVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + + S + + L+ ++ D + D T RE + + Sbjct: 50 IDVANAVCKEMQAECS---FTNQSFDSLIPGLRFRKFDAVIAGMDMTPKREQQVSFSQ-- 104 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y ++ +K + + L G + ++ GTT + L D KA P+ ++ Sbjct: 105 PYYEGLSAVVVTRKGAYHTFADLKGKKVGLENGTTHQRYLQDKQKA----ITPVAYDSYL 160 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGDT 235 + +R + GD + A+ ++ I+ + S L A+ +G+ Sbjct: 161 NAFTDLKNNRLEGVFGD---VAAIGKWLKNNPDYAIMDERASDPDYYGEGLGIAVRKGND 217 Query: 236 EWYNIVSWTHYAMVTAEELGITQK 259 ++ + + E Q+ Sbjct: 218 ALLQEINAALDKVKASPEYAQMQE 241 >gi|55981140|ref|YP_144437.1| amino acid ABC transporter periplasmic amino acid-binding protein [Thermus thermophilus HB8] gi|55772553|dbj|BAD70994.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Thermus thermophilus HB8] Length = 254 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 38/237 (16%), Positives = 86/237 (36%), Gaps = 12/237 (5%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 +IK+ G ++ G F GF+VD A++ + P +++ + Sbjct: 24 EEIKRSGEIRIGTEGAFPPFNYFDERNQLTGFEVDLGNAIAERLGLKP---RWIAQSFDT 80 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 + L + D + + T R ++ ++ G I+ +K G + L G Sbjct: 81 LLIQLNQGRFDFVIASHGITEERARAVDFTN---PHYCTGGVIVSRKGGPRTAKDLPGKV 137 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 + VQ GTT ++R + A R DA+ D + + Sbjct: 138 VGVQVGTTYMEAAQKIPGIK----EVRTYQRDPDALQDLLAGRIDAWITDR-FVAKEAIK 192 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQKNINQ 263 + + + +++ + +A A+ +G+ + ++ ++ I+QK + Sbjct: 193 ERKLENTLQVGELVFQERVAMAVAKGNKGLLDALNRALAELMQDGTYARISQKWFGE 249 >gi|291618215|ref|YP_003520957.1| ArgT [Pantoea ananatis LMG 20103] gi|291153245|gb|ADD77829.1| ArgT [Pantoea ananatis LMG 20103] Length = 260 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 47/269 (17%), Positives = 85/269 (31%), Gaps = 24/269 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L L + S ++ G + F A G GFD Sbjct: 1 MKKRVLALSLMLGLSSAASVFAAVPT--------SIRVGTDPTYPPFESKNAQGQLVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + I +K Y+ + +L++K+ID + + T R+ + + + Sbjct: 53 IDLANEICKRI---QTKCTYVESDFDALIPSLKAKKIDAIISSLSITAKRQEEIAFSDK- 108 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + K I + L G +I V GTT E +Y++ + P + + Sbjct: 109 -LYAANARLVAPKGSKIEPTPKALKGKNIGVLQGTTQETYANEYWRPKGVTVTPYANQDL 167 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + A R DA D L + + + + + D Sbjct: 168 --VYQDLTAGRIDAAFQDEVQAAEGFLKQPVGKSYAFAGPAVKDDKIFGVGTGMGLRKDD 225 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQ 263 TE + A + + G K + Sbjct: 226 TELKAAID---KAFESMRKDGTYDKIAKK 251 >gi|170691224|ref|ZP_02882389.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] gi|170143429|gb|EDT11592.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] Length = 251 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 49/272 (18%), Positives = 89/272 (32%), Gaps = 25/272 (9%) Query: 1 MYKDFFVSILCLIILFFT---SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M +S+ C+ S + +A L + NG Sbjct: 1 MKLQRLLSLACVTFAVTFGGFSGAASAQTPE------VLNVATDATFPPMEYT-ENGART 53 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD AL+ + ++Q+ ++ K L + + D T R + Sbjct: 54 GFDVDLMNALAKVMGK---RVQWTDIDFKGLIPGLIAHRFDAAISGIYITDERAKVIDFT 110 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y G ++ I +V+ L+G + VQ GT + L D F N + E Sbjct: 111 DS--YYAGGLAVLVKSDSPIKTVTDLNGKKVSVQVGTKSVNFLRDNFPQINR----VEVE 164 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + +E+ R DA A Y + T +L ++ A+ + + + Sbjct: 165 KNQEMFDLVGIGRADAAVTGKPAAYQVAKTRTG---FRVLDKTLTTEAYGIAVRKDEPQL 221 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 + T A + A G + + + Sbjct: 222 KAAFN-TALARIKA--DGTYAAIVKKWFGASA 250 >gi|284048018|ref|YP_003398357.1| extracellular solute-binding protein family 3 [Acidaminococcus fermentans DSM 20731] gi|283952239|gb|ADB47042.1| extracellular solute-binding protein family 3 [Acidaminococcus fermentans DSM 20731] Length = 261 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 51/272 (18%), Positives = 86/272 (31%), Gaps = 19/272 (6%) Query: 1 MYK-DFFVSILCLIILFFTSFSTNASILGDIKK---RGFLKCGINTGLVGFAEVKA-NGD 55 M K F IL +++ + KK + L G N F +G Sbjct: 1 MKKMKMFAGILAGLMMCVAAAGCGGGSGTSEKKPAEKKELVVGTNPSFAPFEFTDKKDGK 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFD+D AL+ + K+ + +L+S ID+ T R+ + Sbjct: 61 VMGFDIDLINALARKAGYE--KVTIKSIAFDGLIPSLESGNIDVSITGMSITDARKQKVN 118 Query: 116 LAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 Y G ++ K + I + L G +I VQ GTT A Sbjct: 119 F--TDPYYESGLMAVVKKDNEAIKGLDDLKGKTIAVQLGTTGAKYAETIEGA-----KVK 171 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 F+ + + DA D+ L L + A + + Sbjct: 172 TFDSSDLACLELKNGGADAVISDLPVLQYF-LKQGGSQYAKSVGTPKKGDFYGIATAKKN 230 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 N+ + A+ ++ G QK ++ K Sbjct: 231 ---KNLCDKLNKALAEMKKDGEYQKIYDKWFK 259 >gi|206576073|ref|YP_002239486.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Klebsiella pneumoniae 342] gi|206565131|gb|ACI06907.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Klebsiella pneumoniae 342] Length = 243 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 53/269 (19%), Positives = 97/269 (36%), Gaps = 32/269 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L +L S S +A+ ++ F V AN GFD Sbjct: 1 MKK-----VLIAALLAGMSLSASAAQ--------TIRFATEASYPPFELVDANNQIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL I + + L+ ++ D + D T RE + + Sbjct: 48 VDLANALCKEIDATCT---FTNQAFDSLIPGLKFRRFDAVMAGMDITPEREKQVLFS--- 101 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+D + ++ +S+ QL G + VQ GTT + + D + + + ++ + Sbjct: 102 TPYYDNSALFVGQQGKFTSIDQLKGKKVGVQNGTTHQKFITD----KHPEITTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R DA GD + + + P + + K+ L A+ QG+T+ Sbjct: 158 NAKLDLQNGRIDAVFGDTAVVTEWLKS--NPKLAAVGDKVTDKAYFGTGLGIAVRQGNTD 215 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVS 265 + A+ ++ G Q N+ Sbjct: 216 LQQKFN---AALEKVKKDGTYQTIYNKWF 241 >gi|169834421|ref|YP_001693634.1| ABC transporter solute-binding protein - amino acid transport [Streptococcus pneumoniae Hungary19A-6] gi|168996923|gb|ACA37535.1| ABC transporter solute-binding protein - amino acid transport [Streptococcus pneumoniae Hungary19A-6] Length = 268 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 46/274 (16%), Positives = 90/274 (32%), Gaps = 18/274 (6%) Query: 1 MYKDFFVSI-LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56 M K L ++ L F + ++ + IK +G L +N F V Sbjct: 4 MKKVLMTMFGLVMLPLLFACSNNQSAGIEAIKSKGKLVVALNPDFAPFEYQKVVDGKNQI 63 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G D++ +A+++ + + ++ P++ ++QS + D+ T R S Sbjct: 64 VGSDIELAKAIATELGVE---LELSPMSFDNVLASVQSGKADLAISGVSKTDER--SKVF 118 Query: 117 AFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F Y I+ K SV+ L+ + Q G+ E D + Sbjct: 119 DFSTPYYTAKNKLIVKKSDLATYQSVNDLAQKKVGAQKGSIQETMAKDLL----QNSSLV 174 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + ++ + DA + N + + + A A+ + Sbjct: 175 SLPKNGNLITDLKSGQVDAVIFEEPVSKGFVENNPDLAIADLNFEKEQDDSYAVAMKKDS 234 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 E V T + + EL K I K + Sbjct: 235 KELKEAVDKTIQKLKESGELD---KLIEDAFKAS 265 >gi|304395814|ref|ZP_07377697.1| cationic amino acid ABC transporter, periplasmic binding protein [Pantoea sp. aB] gi|304357108|gb|EFM21472.1| cationic amino acid ABC transporter, periplasmic binding protein [Pantoea sp. aB] Length = 248 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 51/267 (19%), Positives = 92/267 (34%), Gaps = 23/267 (8%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K + + L F+ ST A L +T V F + + + GFDV Sbjct: 1 MKSLLKVSVAALALAFSLSSTAADK--------KLVVATDTAFVPFEFKQGD-KYVGFDV 51 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D A++ + D P++ ALQ++ +D+ T R+ ++ + Sbjct: 52 DLWDAIAKELKLD---YTLKPMDFSGIIPALQTRNVDLALAGITITEERKKAIEFSDG-- 106 Query: 122 TYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G ++ + I +S L+G + V++GT + +Y KAH F ++ Sbjct: 107 YYKSGLQVMVRNNENDIKGISDLNGKVVAVKSGTGSV----EYAKAHIKSKDLRQFPNID 162 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +R DA D + T + + D I A +G + Sbjct: 163 SAYMELGTNRADAVLHDTPNILYFIHTAGK-GRFKAVGDSIEAQQYGIAFPKGSDDLREK 221 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKD 267 V+ T +E G + Sbjct: 222 VNGALK---TLKENGTYNTLYKKWFGT 245 >gi|168487060|ref|ZP_02711568.1| ABC transporter solute-binding protein - amino acid transport [Streptococcus pneumoniae CDC1087-00] gi|183570002|gb|EDT90530.1| ABC transporter solute-binding protein - amino acid transport [Streptococcus pneumoniae CDC1087-00] Length = 268 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 46/274 (16%), Positives = 90/274 (32%), Gaps = 18/274 (6%) Query: 1 MYKDFFVSI-LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56 M K L ++ L F + ++ + IK +G L +N F V Sbjct: 4 MKKVLMTMFGLVMLPLLFACSNNQSAGIEAIKSKGKLVVALNPDFAPFEYQKVVDGKNQI 63 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G D++ +A+++ + + ++ P++ ++QS + D+ T R S Sbjct: 64 VGSDIELAKAIATELGVE---LELSPMSFDNVLASVQSGKADLAISGVSKTDER--SKVF 118 Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F Y I+ K SV+ L+ + Q G+ E D + Sbjct: 119 DFSTPYYTAKNKLIVKKSDLTTYQSVNDLAQKKVGAQKGSIQETMAKDLL----QNSSLV 174 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + ++ + DA + N + + + A A+ + Sbjct: 175 SLPKNGNLITDLKSGQVDAVIFEEPVSKGFVENNPDLAIADLNFEKEQDDSYAVAMKKDS 234 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 E V T + + EL K I K + Sbjct: 235 KELKEAVDKTIQKLKESGELD---KLIEDAFKAS 265 >gi|307706858|ref|ZP_07643660.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus mitis SK321] gi|307617731|gb|EFN96896.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus mitis SK321] Length = 271 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 43/276 (15%), Positives = 92/276 (33%), Gaps = 23/276 (8%) Query: 1 MYKDFFVSILCLIILFF------TSFSTNASILGDIKKRGFLKCGINTGLVGF---AEVK 51 M ++ +LC + F + + + S + IK++G L + F + V Sbjct: 1 MKSKKWIFVLCSFLASFFLVACQSGSNGSQSAVEAIKQKGKLVVATSPDYAPFEFQSLVD 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G D+D +A++ + K++ ++ +LQ+ + D+ T R Sbjct: 61 GKNQVVGADIDMAQAIADELG---VKLEISSMSFDNVLTSLQTGKADLAVAGISATDER- 116 Query: 112 ISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 F Y + F++ K ++ L A+I Q GT E + + Sbjct: 117 -KEVFDFSIPYYENKISFLVRKSDVEKYKDLTSLESANIAAQKGTVPEAMVKEQLPKAQ- 174 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + E +A + DA D + N + + + A A Sbjct: 175 ---LTSLTNMGEAVNELQAGKVDAVHMDEPVALSYAAKNADLAVATVSLKMKDGEANAVA 231 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 + + + +V ++ G Q + + + Sbjct: 232 LRKNSADLKEVVDKVIQ---RLKDDGTYQSYLEKAA 264 >gi|282849231|ref|ZP_06258616.1| putative lysine/arginine/ornithine ABC transporter, periplasmic lysine/arginine/ornithine-binding protein ArgT [Veillonella parvula ATCC 17745] gi|294793050|ref|ZP_06758196.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Veillonella sp. 6_1_27] gi|282580935|gb|EFB86333.1| putative lysine/arginine/ornithine ABC transporter, periplasmic lysine/arginine/ornithine-binding protein ArgT [Veillonella parvula ATCC 17745] gi|294455995|gb|EFG24359.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Veillonella sp. 6_1_27] Length = 270 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 44/271 (16%), Positives = 89/271 (32%), Gaps = 13/271 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K V + + ++ F + + + + + G++ G+ GFD+ Sbjct: 4 KKMMAVGLAAVSMMAFVTGCGGDAKKANTELPKKVVIGLDDSFPPMGFKDEKGEIVGFDI 63 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D + + D +++ ++ + L+SK+ID L + RE ++ Sbjct: 64 DMAKEAAKRAGMD---VEFKAIDWSSKEAELKSKKIDALWNGLTVSPEREKNILF--SNT 118 Query: 122 TYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 D Q I+ I + L+G + VQ +T E L + +K + Sbjct: 119 YMKDKQYVIVRNDDDSIKGKADLAGKVVGVQQASTGEAALQNDPSGKTVK-ETKSYADFV 177 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL-PDIISKSPLAPAIIQGDTEWYN 239 R DA D A L P ++ I+ A + DT + Sbjct: 178 SAFMDLGIGRVDAVIADGVI--ARYLMTKEPGKYKIVEGTDYGVDNFAVGFRKDDTALRD 235 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 ++ M ++ G K + + Sbjct: 236 KINGILAEM---KKDGTADKIAEKWLGSGAD 263 >gi|119873347|ref|YP_931354.1| extracellular solute-binding protein [Pyrobaculum islandicum DSM 4184] gi|119674755|gb|ABL89011.1| extracellular solute-binding protein, family 3 [Pyrobaculum islandicum DSM 4184] Length = 292 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 87/249 (34%), Gaps = 10/249 (4%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + + IKKRG L G + + V + G+D+D R ++ A+ +++ Sbjct: 52 AACPVSVDVIKKRGKLIVGTDATWPPWEWVMGD-KIVGWDIDIAREIAKALG---VQLEI 107 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISS 139 + A++ +D+ WT RE L + Y + + + I+ Sbjct: 108 RDMRFAGLLEAVRKGDVDLAISAITWTSEREKVLEFSM--PYYLESIVVVTKASRTDINK 165 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 V L G ++ VQ GTT E A + + + + DA D S Sbjct: 166 VEDLYGKTVGVQIGTTHEEWAATNLEKPGKATVRRYDKVYPYMVEVLKRGDVDAIILDRS 225 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQ 258 AL LP S ++ A+ + + +V ++ +L I Q Sbjct: 226 IATALVRKFPDLKIAFELPG--SAGYISVAMPKCAQDLKLVVDQVIENLMQTGKLDEIFQ 283 Query: 259 KNINQVSKD 267 +N + Sbjct: 284 RNFELFLQS 292 >gi|328956821|ref|YP_004374207.1| putative ABC transporter [Carnobacterium sp. 17-4] gi|328673145|gb|AEB29191.1| putative ABC transporter [Carnobacterium sp. 17-4] Length = 274 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 45/279 (16%), Positives = 99/279 (35%), Gaps = 21/279 (7%) Query: 2 YKDFFVSILCLIILFFTSFSTN----------ASILGDIKKRGFLKCGINTGLVGFAEVK 51 K + ++ + + LF ++ T+ +L ++ G LK G+ + + Sbjct: 3 KKKWMLAGIAAVALFVSACGTSTKEDATSTEGGDLLQSVQDAGVLKVGVMGTYQPYNFIN 62 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 + D GFD D + ++ + D I+++ LQ+ + D+++ T R+ Sbjct: 63 EDKDMDGFDADIAKEIAKGLDVD---IEFVSQEFSGMIAGLQTGKFDMVASQMTITDDRK 119 Query: 112 ISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 + + I+ I+SV G I V GT E L + + Sbjct: 120 KEMLF--SDPYITNQVKVIVKDDNTEITSVEDFVGKDIGVGLGTNDETYLRNELMPEVGE 177 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 ++ ++ V + R DA ++ AL + + + + I A+ Sbjct: 178 FNIRTYDDVITSLKDLDSGRIDATINNMYAL--KPIIEANGLKIKAVGEPIKSDQAGIAV 235 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 G+ + V+ T + + A G + + + Sbjct: 236 QLGNEAFIEEVN-TILSDIKA--DGTYDEIFMKWFGEAP 271 >gi|127514094|ref|YP_001095291.1| extracellular solute-binding protein [Shewanella loihica PV-4] gi|126639389|gb|ABO25032.1| extracellular solute-binding protein, family 3 [Shewanella loihica PV-4] Length = 242 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 45/257 (17%), Positives = 89/257 (34%), Gaps = 27/257 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK--ANGDWKG 58 M K ++ ++L K++ +L G N F V + G Sbjct: 1 MNKSILLAGFTALLLLSGCG----------KEQDYLVVGTNAAFPPFEYVGGVSGDQVMG 50 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD+D R ++ K++ + ++ +AL + +ID+++ T R+ S+ + Sbjct: 51 FDIDLARKVAEDA-GKTLKVENMKFDS--LIVALNAGKIDMIASGMTITPERQASVDFSE 107 Query: 119 RPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y Q +++K I S++ L+G VQ G+T ++ Y ++ F Sbjct: 108 --PYYEATQVVLVNKQDDSIHSLADLTGKHFAVQLGSTADMMAKKYTQS------VTAFN 159 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E + + D D N E ++ A+ + E Sbjct: 160 TGFEAIMELKNGKVDLVLFDSEPAANYLAKNP---ELKLISLDFPPEFYGFAVAKSQPEL 216 Query: 238 YNIVSWTHYAMVTAEEL 254 ++ T M E Sbjct: 217 LASINKTLATMKQNGEY 233 >gi|162148490|ref|YP_001602951.1| putative arginine-binding periplasmic protein 2 [Gluconacetobacter diazotrophicus PAl 5] gi|161787067|emb|CAP56654.1| putative arginine-binding periplasmic protein 2 precursor [Gluconacetobacter diazotrophicus PAl 5] Length = 305 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 46/270 (17%), Positives = 88/270 (32%), Gaps = 22/270 (8%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 + ++ A L DI+ G L G+N L A + +GFDVD Sbjct: 43 ILAGCVLSLLPLCIGQGAQARALADIRASGHLNIGVNPALPPLAAYDSRNVIEGFDVDVG 102 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 AL++ + P + +P+++ R L + ++D++ T R ++ Y Sbjct: 103 TALAARLGVSP---RLVPVSSSGRIPYLMAGKVDVVLGGLTRTPERAAAIAF--SAPLYA 157 Query: 125 DGQGFIMHKKKGISSVSQLSGASI--CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 + I + + L+ + G+T L + ++ + Sbjct: 158 EEFAIIAPAVSRVGGLDDLASGRVRMVEVRGSTAVPFLRTHAPKA----PILLLGSYPDA 213 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA----PAIIQGDTEWY 238 A R DA D+ L + + I +P A + Q DT+ Sbjct: 214 VRALAQGRGDAMV-DVIEYVGRFLAAEPQAGWTI---QRGFAPAAGEDCVGVAQSDTDLL 269 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDT 268 +V T + G Q + + Sbjct: 270 RVVDGTL---ADLKRDGTIQAAYRRWFGVS 296 >gi|269797366|ref|YP_003311266.1| extracellular solute-binding protein family 3 [Veillonella parvula DSM 2008] gi|269093995|gb|ACZ23986.1| extracellular solute-binding protein family 3 [Veillonella parvula DSM 2008] Length = 270 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 44/271 (16%), Positives = 89/271 (32%), Gaps = 13/271 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K V + + ++ F + + + + + G++ G+ GFD+ Sbjct: 4 KKMMAVGLAAVSMMAFVTGCGGDTKKANTELPKKVVIGLDDSFPPMGFKDEKGEIVGFDI 63 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D + + D +++ ++ + L+SK+ID L + RE ++ Sbjct: 64 DMAKEAAKRAGMD---VEFKAIDWSSKEAELKSKKIDALWNGLTVSPEREKNILF--SNT 118 Query: 122 TYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 D Q I+ I + L+G + VQ +T E L + +K + Sbjct: 119 YMKDKQYVIVRNDDDSIKGKADLAGKVVGVQQASTGEAALQNDPSGKTVK-ETKSYADFV 177 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL-PDIISKSPLAPAIIQGDTEWYN 239 R DA D A L P ++ I+ A + DT + Sbjct: 178 SAFMDLGIGRVDAVIADGVI--ARYLMTKEPGKYKIVEGTDYGVDNFAVGFRKDDTALRD 235 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 ++ M ++ G K + + Sbjct: 236 KINGILAEM---KKDGTADKIAEKWLGSGAD 263 >gi|221231046|ref|YP_002510198.1| putative extracellular amino acid-binding protein [Streptococcus pneumoniae ATCC 700669] gi|220673506|emb|CAR67982.1| putative extracellular amino acid-binding protein [Streptococcus pneumoniae ATCC 700669] Length = 268 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 45/274 (16%), Positives = 92/274 (33%), Gaps = 19/274 (6%) Query: 2 YKDFFVSILCLIIL--FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56 K +++ L++L F + ++ + IK +G L +N F V Sbjct: 4 MKKVLMTMFGLVMLPQLFACSNNQSAGIEAIKSKGKLVVALNPDFAPFEYQKVVDGKNQI 63 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G D++ +A+++ + + ++ P++ ++QS + D+ T R S Sbjct: 64 VGSDIELAKAIATELGVE---LELSPMSFDNVLASVQSGKADLAISGVSKTDER--SKVF 118 Query: 117 AFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F Y I+ K SV+ L+ + Q G+ E D + Sbjct: 119 DFSTPYYTAKNKLIVKKSDLATYQSVNDLAQKKVGAQKGSIQETMAKDLL----QNSSLV 174 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + ++ + DA + N + + + A A+ + Sbjct: 175 SLPKNGNLITDLKSGQVDAVIFEEPVAKGFVENNPDLAIADLNFEKEQDDSYAVAMKKDS 234 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 E V T + + EL K I K + Sbjct: 235 KELKEAVDKTIQKLKESGELD---KLIEDAFKAS 265 >gi|156934694|ref|YP_001438610.1| glutamine ABC transporter periplasmic protein [Cronobacter sakazakii ATCC BAA-894] gi|156532948|gb|ABU77774.1| hypothetical protein ESA_02529 [Cronobacter sakazakii ATCC BAA-894] Length = 262 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 53/267 (19%), Positives = 91/267 (34%), Gaps = 24/267 (8%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K F L + L F S A L +T V F + + + GFDV Sbjct: 16 MKSVFKVSLAALTLAFAVSSQAAD---------KLVVATDTAFVPFEFKQGD-KYVGFDV 65 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D A++ + D P++ ALQ+K +D+ T R+ ++ + Sbjct: 66 DLWAAIAKELKLD---YTLKPMDFSGIIPALQTKNVDLALAGITITDERKKAIDFSDG-- 120 Query: 122 TYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G ++ + SV L G + V++GT + DY KA+ F ++ Sbjct: 121 YYNSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNID 176 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +R DA D + T + + D ++ A +G E Sbjct: 177 NAYMELGTNRADAVLHDTPNILYFIKTAGN-GQFKAVGDSLAGQQYGIAFPKGSDELRTK 235 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKD 267 V+ T +E G + + Sbjct: 236 VNGALK---TLKENGTYNEIYKKWFGT 259 >gi|152969450|ref|YP_001334559.1| arginine 3rd transport system periplasmic binding protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238893921|ref|YP_002918655.1| arginine 3rd transport system periplasmic binding component [Klebsiella pneumoniae NTUH-K2044] gi|329998468|ref|ZP_08303105.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Klebsiella sp. MS 92-3] gi|150954299|gb|ABR76329.1| arginine 3rd transport system periplasmic binding protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238546237|dbj|BAH62588.1| arginine 3rd transport system periplasmic binding component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|328538658|gb|EGF64754.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Klebsiella sp. MS 92-3] Length = 243 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 47/269 (17%), Positives = 84/269 (31%), Gaps = 32/269 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L + + G++ F + AN GFD Sbjct: 1 MKKLVLAALLTSFAFGAAAAE-------------KISFGVSATYPPFESMDANNQIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + + + + AL+ K+ D + D T R + Sbjct: 48 IDLAHALCKQMQAECT---FTNHAFDSLIPALKFKKYDAVISGMDITPERSKQVAFTD-- 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+ ++ KK S L G I ++ GTT + L D + + + ++ + Sbjct: 103 -PYYANSALVIAKKDAFHSFDDLKGKRIGMENGTTHQKYLQD----KHPEVKTVAYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + T P P + L A+ + Sbjct: 158 NAIIDLKNGRIDGVFGDTAVVNEWLKT--NPQLGAATPKVTDPQYFGTGLGIAVRPDNKA 215 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVS 265 ++ A+ G QK NQ Sbjct: 216 LLEKLNAALKAIKA---DGTYQKISNQWF 241 >gi|330448489|ref|ZP_08312137.1| bacterial extracellular solute-binding s, 3 family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328492680|dbj|GAA06634.1| bacterial extracellular solute-binding s, 3 family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 270 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 53/274 (19%), Positives = 98/274 (35%), Gaps = 26/274 (9%) Query: 1 MYKDFFVSILCLIILFFT--SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + F V + L +LF +F+ L IK+RG L+ G++T V +A G+ G Sbjct: 1 MKRIFAVLLTALTLLFSVNHAFAAEKGTLEQIKERGTLRVGLST-FVPWAMRDKQGELIG 59 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 F+VD + ++ K++++P AL + + D++ T R +S+ Sbjct: 60 FEVDVAKRVAKDAG---VKVEFIPTAWDGIIPALLAGKFDVIIGGMSITPQRNLSVLF-- 114 Query: 119 RPITYFDGQGFIMHKKKGIS--SVSQLSGASI--CVQAGTTTELTLADYFKAHNMKYHPI 174 G K+ +++ + S+ V+ G T T YF Sbjct: 115 TTPYSHSGIQLAASKELASDKLTIADYNKRSVTLAVRRGAVTVQTAKKYFPKA----KLR 170 Query: 175 VFERVEEIDAAYRAHRCDAY--TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 F+ + A + AL+ + + + +S+ AI Q Sbjct: 171 QFDDESQAFQEVLNGNAQAVLASTPKPEQMALQYKDK---LFIPFKERLSQGSEGFAIRQ 227 Query: 233 GDTEWYN-IVSWTHYAMVTAEELGITQKNINQVS 265 GD N +W + G Q+ + Sbjct: 228 GDFNLLNFFNNWILLRT----QDGWLQERYDYWF 257 >gi|296103259|ref|YP_003613405.1| glutamine ABC transporter periplasmic protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057718|gb|ADF62456.1| glutamine ABC transporter periplasmic protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 247 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 50/267 (18%), Positives = 89/267 (33%), Gaps = 24/267 (8%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K L + L F S A L +T V F + + + GFDV Sbjct: 1 MKSVLKVSLAALTLAFAVSSQAAD---------KLVVATDTAFVPFEFKQGD-KYVGFDV 50 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D A++ + D P++ ALQ+K +D+ T R+ ++ + Sbjct: 51 DLWAAIAKELKLD---YTLKPMDFSGIIPALQTKNVDLALAGITITDERKKAIDFSDG-- 105 Query: 122 TYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G ++ + SV L G + V++GT + DY KA+ F ++ Sbjct: 106 YYKSGLLVMVKADNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNID 161 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +R DA D + T + + + + A +G + Sbjct: 162 NAYMELGTNRADAVLHDTPNILYFIKTAGN-GKFKAVGESLEAQQYGIAFPKGSDDLRTK 220 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKD 267 V+ T +E G + + Sbjct: 221 VNGALK---TLKENGTYNEIYKKWFGT 244 >gi|187779363|ref|ZP_02995836.1| hypothetical protein CLOSPO_02959 [Clostridium sporogenes ATCC 15579] gi|187772988|gb|EDU36790.1| hypothetical protein CLOSPO_02959 [Clostridium sporogenes ATCC 15579] Length = 272 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 46/288 (15%), Positives = 95/288 (32%), Gaps = 37/288 (12%) Query: 1 MYKDFF-------VSILCLIILFF----TSFSTNASILGDIKKRGFLKCGINTGLVGFAE 49 M K +S+ +I L T+ + S + IK+ G L G + Sbjct: 1 MSKKILGKLGAIIISLTMVISLVACGKNTASNEGKSKVDKIKESGKLVIGTCADYPPYEF 60 Query: 50 ---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 + + GFD+ + ++ + K++ + ALQS +D++ + Sbjct: 61 HKTINGKDEIVGFDITIAKEIAKDLG---VKLEIKDMKFDGLLAALQSGNVDMVIAGMNP 117 Query: 107 TLLREISLGLAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYF 164 T R+ S+ + Y Q ++ K S+ G I VQ GTT E + Sbjct: 118 TEDRKKSVDF--SKVYYQAIQSVVVRAEDKDKFKSIEDFKGKKIGVQKGTTQE----EVA 171 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 K +V ++ + + D + + + + Sbjct: 172 KREMTNSEIKSLGKVTDLVLELQNKKVDGLVLENPVAVSYA---SNGKDLAVSNVKFENK 228 Query: 225 PLA--PAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 A+ +G+ E + + T ++ +K+I++ D Sbjct: 229 DKGASVAVKKGNKELVDAIDKTLDKLIK-------EKSIDKFVTDANK 269 >gi|298291725|ref|YP_003693664.1| extracellular solute-binding protein family 3 [Starkeya novella DSM 506] gi|296928236|gb|ADH89045.1| extracellular solute-binding protein family 3 [Starkeya novella DSM 506] Length = 266 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 37/261 (14%), Positives = 84/261 (32%), Gaps = 8/261 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ + A +L DI ++ + + + ++ G D Sbjct: 1 MLKHSVLAAALAAAFLVGGTAAKADLLDDIMAAKKIRISTDLAIPPSGMMDSSMKPVGSD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ L+ + I+++ R LQ+ + D++ T R + Sbjct: 61 VETAELLAKDLG---LTIEWVQTTGATRIPNLQTNKADVVISTLSVTPERAKVIDFTDPY 117 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 G + K + L G +I V GTT + L + K ++ ++ Sbjct: 118 AALESVVGGL--KTIEVKDWDGLKGKTIAVSRGTTQDTALTNRAKE-GGGFNVARYDDDA 174 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A + D + + ++ P+ +I+ LA + +G+ Sbjct: 175 TMVTAAVTGQADFIATSATIVN--QIGVKNPARAFEPKVLITTFNLAMGVKKGEPRLKAK 232 Query: 241 VSWTHYAMVTAEELGITQKNI 261 ++ + +L K Sbjct: 233 LNEWIAENIKNGKLNAIYKKY 253 >gi|319943564|ref|ZP_08017846.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lautropia mirabilis ATCC 51599] gi|319743379|gb|EFV95784.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lautropia mirabilis ATCC 51599] Length = 281 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 41/233 (17%), Positives = 80/233 (34%), Gaps = 9/233 (3%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 + G++ + GFD+D R +S + ++++ P++ + L Sbjct: 55 KVVIGLDDNFPPMGFRNEKNELVGFDIDMAREAASRMG---VQVEFKPIDWNAKEAELIG 111 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 K++D L T R +AF P + Q I+ + I + + L+G + Q G+ Sbjct: 112 KRVDALWNGLTITEKR--KQNIAFTPPYMQNHQIIIVKRGSPIGNKTGLAGKIVGAQDGS 169 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 + + K + + A R DA D + +P + Sbjct: 170 SAVDAIEADAKVSKSLKQLKKYGDNVTVLLDLDAGRLDAAVLD--EVVGRYYVAKKPFAY 227 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 V+L + + + DT +S +M + G K KD Sbjct: 228 VVLEEDFGTEDYGVGLRKEDTALQEKLSAALESMKKDGKAGQIAKT--WFGKD 278 >gi|212640131|ref|YP_002316651.1| amino acid ABC transporter periplasmic protein [Anoxybacillus flavithermus WK1] gi|212561611|gb|ACJ34666.1| ABC-type amino acid transport system, periplasmic component [Anoxybacillus flavithermus WK1] Length = 265 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 55/272 (20%), Positives = 89/272 (32%), Gaps = 21/272 (7%) Query: 1 MYKDFFVSILCLIILFFTSFST---NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K + L + T + IK++G LK G F G+ Sbjct: 6 MKKWLLLIALFMFGALLTGCGQKEKENDLFAQIKEKGELKIGTEGTYPPFTFHDETGELT 65 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDV+ R ++ + P ++ F L +K+ D+++ R+ Sbjct: 66 GFDVEIAREVAKRLGVKPV---FIETKWDAMFAGLDAKRFDMIANQVGIRPDRQEKYDF- 121 Query: 118 FRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 ++HK K I S + G Q+ T+ LA + A + Sbjct: 122 -SNPYITSAAVLVVHKENKEIKSFEDIKGKK-AAQSMTSNYAELARSYGA-----EVVGV 174 Query: 177 ERVEEIDAAYRAHRCDAYTGDI-SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 E + + R DA D S L LK D P + V D S+S +G Sbjct: 175 EGFNQAIELLSSKRVDATMNDKLSVLDFLKQKPDAPIQIVATHDDASQS--GLMFRKGSD 232 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 V+ M+ E G K + + Sbjct: 233 TLVEAVNKALKEMM---EDGTYTKISEKWFGE 261 >gi|291616876|ref|YP_003519618.1| ArtI [Pantoea ananatis LMG 20103] gi|291151906|gb|ADD76490.1| ArtI [Pantoea ananatis LMG 20103] Length = 246 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 47/232 (20%), Positives = 83/232 (35%), Gaps = 13/232 (5%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 ++ F V AN +GFDVD AL + + + +L+ Sbjct: 25 TIRIATEASYPPFEFVDANNKIQGFDVDLANALCKEMDATCT---FTNQAFDSLIPSLKF 81 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 ++ D + D T RE + + Y+D + +K ++SV L G + VQ GT Sbjct: 82 RRFDAVMAGMDITPEREKQVLFSK---PYYDNSAIFVAQKGKVASVEALKGKRVGVQNGT 138 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR--PS 212 T + L D + + ++ + + R DA GD + + N + P Sbjct: 139 THQKYLTD----KHADITVVPYDSYQNAVLDLKNGRIDAVFGDSAVVNEWLKQNAKLAPV 194 Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQKNINQ 263 + + L A+ QG+TE + + + I K Q Sbjct: 195 GEKVTDKAYFGTGLGIAVRQGNTELQSKFNTALDKIKADGTYKTIYSKWFQQ 246 >gi|331008688|gb|EGH88744.1| putative ABC transporter exported solute-binding protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 279 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 45/244 (18%), Positives = 90/244 (36%), Gaps = 12/244 (4%) Query: 11 CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSS 69 L ++ + + L I +R + G+ F + A GD +G++V+ + L+ Sbjct: 12 ALGLILCAGLAQADATLERINERHKVSVGVLLSGPPFGTIDPATGDHQGYNVELSKELAK 71 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD-GQG 128 + D ++ + + A R LQ ++D+L N +T R + L + P Y + G Sbjct: 72 RLSVD---LETVSVLAPNRVQFLQQGKVDLLIANMQFTEER--AQILDYVPTPYEEVGGA 126 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 ++ K GIS G +CV G+ L + + A F E + R Sbjct: 127 ALVRKGSGISMWEDFKGKPVCVSQGSNFIKPLQELYGAQ-----IKAFRSQSESLLSLRG 181 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 + C A + L + + +P + S + +G+ + + Sbjct: 182 NGCVAAVHVSPTMRTLLSEKEWSGYEIPVPTDLIPSSSVIWVRKGEHDIQARLDAIVRDW 241 Query: 249 VTAE 252 + Sbjct: 242 HRSG 245 >gi|259505861|ref|ZP_05748763.1| ABC amino acid transport system, secreted component [Corynebacterium efficiens YS-314] gi|259166535|gb|EEW51089.1| ABC amino acid transport system, secreted component [Corynebacterium efficiens YS-314] Length = 355 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 42/241 (17%), Positives = 85/241 (35%), Gaps = 12/241 (4%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 +I +RG L G++ + +G +GF+V + ++ IF +P + + + A + Sbjct: 93 EIFQRGRLIVGVDQSKNLLSFRDPVSGQLRGFEVQLAKEIARDIFGNPEAVDFRFIEAGD 152 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 L +D++ R+ T R + ++ GI + L+G + Sbjct: 153 SLRGLSRGDVDMVIRSVSVTEDRLRRMEF--STPYMRTQTRLLVMDNSGIQGIEDLAGNT 210 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 +CV G+T + + + A + + A GD + L + Sbjct: 211 VCVADGSTALQKTRAMAPESS----ILRTRNWSDCLMALQQQQAQAILGDDAVLAGIAAQ 266 Query: 208 NDRPSEHVILPDIISKSPLAPAI--IQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 + ILP I++ A AI + + +V + M +E N Sbjct: 267 DP---YTRILPSILAWESYAVAIAPSRASRDTTGLVRQVNATMERIQEDTTWWSMFNDWF 323 Query: 266 K 266 Sbjct: 324 G 324 >gi|257488014|ref|ZP_05642055.1| putative ABC transport system, exported solute-binding protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 267 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 45/244 (18%), Positives = 90/244 (36%), Gaps = 12/244 (4%) Query: 11 CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSS 69 L ++ + + L I +R + G+ F + A GD +G++V+ + L+ Sbjct: 12 ALGLILCAGLAQADATLERINERHKVSVGVLLSGPPFGTIDPATGDHQGYNVELSKELAK 71 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD-GQG 128 + D ++ + + A R LQ ++D+L N +T R + L + P Y + G Sbjct: 72 RLSVD---LETVSVLAPNRVQFLQQGKVDLLIANMQFTEER--AQILDYVPTPYEEVGGA 126 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 ++ K GIS G +CV G+ L + + A F E + R Sbjct: 127 ALVRKGSGISMWEDFKGKPVCVSQGSNFIKPLQELYGAQ-----IKAFRSQSESLLSLRG 181 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 + C A + L + + +P + S + +G+ + + Sbjct: 182 NGCVAAVHVSPTMRTLLSEKEWSGYEIPVPTDLIPSSSVIWVRKGEHDIQARLDAIVRDW 241 Query: 249 VTAE 252 + Sbjct: 242 HRSG 245 >gi|290473962|ref|YP_003466836.1| arginine ABC transporter periplasmic binding protein [Xenorhabdus bovienii SS-2004] gi|289173269|emb|CBJ80044.1| arginine transport protein (ABC superfamily, peri_bind) [Xenorhabdus bovienii SS-2004] Length = 247 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 46/268 (17%), Positives = 92/268 (34%), Gaps = 26/268 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F ++L + L ++ + L + F + AN +GFD Sbjct: 1 MKKLLFAALLTAMTLSTSATAAEKETL---------RFATEATYPPFEFIDANNKIQGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A+ + I + + + +L+ ++ D L D T R + Sbjct: 52 VDLANAICAKINTECT---FTNQAFDSLIPSLKFRRFDALMAGIDITPDRRKQVDFTH-- 106 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 TY+D + K + + L + +Q GTT + L + + + + ++ + Sbjct: 107 -TYYDNSAVFIAIKGKFTHSADLKSKQVGIQNGTTHQKYLME----QHKEIKTVPYDSYQ 161 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R DA GD + A + + + K L A+ +G+T Sbjct: 162 NAILDLKNGRIDAVFGDTAV--ANEWLKKNKELGSVGDKVTDKDYFGIGLGIAVRKGNTA 219 Query: 237 WYNIVSWTHYAMVTAEELG-ITQKNINQ 263 + ++ + I +K Q Sbjct: 220 LLDKLNKALAEVKQDGTYNSIYKKWFEQ 247 >gi|157363723|ref|YP_001470490.1| extracellular solute-binding protein [Thermotoga lettingae TMO] gi|157314327|gb|ABV33426.1| extracellular solute-binding protein family 3 [Thermotoga lettingae TMO] Length = 241 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 46/267 (17%), Positives = 99/267 (37%), Gaps = 32/267 (11%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + F+ ++ L + F+ + G + F + NG + G Sbjct: 1 MKFTRAMFLILILLSAMTFSR---------------TITVGTSADFPPFEYI-ENGQFVG 44 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD+D R ++ D ++++ ++ AL++ Q+D+++ T R+ + + Sbjct: 45 FDMDLMREIAKIAGFD---LKFVDMSFDSLIPALRAGQVDVVAAAMTITDERKQVVDFSI 101 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM--KYHPIVF 176 + Q I+ + ++ S I VQ GTT +L D + M + + + Sbjct: 102 --PYWTADQSVIVKSESPLTITVLFSKGKIGVQTGTTGDLWCTDNLVSTGMLPEKNLKRY 159 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + DA D A + +P V + I + A+ +G+ E Sbjct: 160 DTFVLALSDLLNGNIDAIVLDSPV--ANRFAATKPVRVVGI--ITTGEQYGVAVRKGEKE 215 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQ 263 ++ A+ E G + I++ Sbjct: 216 LLEKIN---NAIKVLNESGKMSELIDK 239 >gi|121606948|ref|YP_984277.1| extracellular solute-binding protein [Polaromonas naphthalenivorans CJ2] gi|120595917|gb|ABM39356.1| amino acid ABC transporter substrate-binding protein, PAAT family [Polaromonas naphthalenivorans CJ2] Length = 264 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 43/244 (17%), Positives = 83/244 (34%), Gaps = 12/244 (4%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 + + L I R + GI T + + + +G DV + ++ + K Sbjct: 21 SVPAQADDSLTAIMARKSISLGIATDFPPYGFMSPDFKPQGLDVAVAQLIADKLG---VK 77 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 + P++ R LQ+K+ID++ + R + + ++ Q K I Sbjct: 78 AEMTPVSTPNRIPYLQTKKIDLIVSSLGKNPERAKVIDFSVAYAPFY--QAVFGPKALSI 135 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 S L+G SI V GT + L FE AA+ + + Sbjct: 136 KSFQDLAGKSIAVTRGTIQDDVLQQVAP---PTLKIQRFEDDNSTVAAFVSQQTQLLATG 192 Query: 198 ISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 + N + +E+ +L + SP + +G+T + V+ L Sbjct: 193 AAVAGVAIQKNPQIQAEYKLL---LKDSPNFIGVRKGETALLDKVNEILRQAKADGTLNT 249 Query: 257 TQKN 260 + Sbjct: 250 YAQR 253 >gi|225855891|ref|YP_002737402.1| ABC transporter solute-binding protein - amino acid transport [Streptococcus pneumoniae P1031] gi|225857977|ref|YP_002739487.1| ABC transporter solute-binding protein - amino acid transport [Streptococcus pneumoniae 70585] gi|237649604|ref|ZP_04523856.1| ABC transporter solute-binding protein - amino acid transport [Streptococcus pneumoniae CCRI 1974] gi|237821348|ref|ZP_04597193.1| ABC transporter solute-binding protein - amino acid transport [Streptococcus pneumoniae CCRI 1974M2] gi|225720416|gb|ACO16270.1| ABC transporter solute-binding protein - amino acid transport [Streptococcus pneumoniae 70585] gi|225725940|gb|ACO21792.1| ABC transporter solute-binding protein - amino acid transport [Streptococcus pneumoniae P1031] Length = 268 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 46/274 (16%), Positives = 90/274 (32%), Gaps = 18/274 (6%) Query: 1 MYKDFFVSI-LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56 M K L ++ L F + ++ + IK +G L +N F V Sbjct: 4 MKKVLMTMFGLVMLPLLFACSNNQSAGIEAIKSKGKLVVALNPDFAPFEYQKVVDGKNQI 63 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G D++ +A+++ + + ++ P++ ++QS + D+ T R S Sbjct: 64 VGSDIELAKAIATELGVE---LELSPMSFDNVLASVQSGKADLAISGVSKTDER--SKVF 118 Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F Y I+ K SV+ L+ + Q G+ E D + Sbjct: 119 DFSIPYYTAKNKLIVKKSDLTTYQSVNDLAQKKVGAQKGSIQETMAKDLL----QNSSLV 174 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + ++ + DA + N + + + A A+ + Sbjct: 175 SLPKNGNLITDLKSGQVDAVIFEEPVSKGFVENNPDLAIADLNFEKEQDDSYAVAMKKDS 234 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 E V T + + EL K I K + Sbjct: 235 KELKEAVDKTIQKLKESGELD---KLIEDAFKAS 265 >gi|323969573|gb|EGB64861.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli TA007] Length = 243 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 50/269 (18%), Positives = 96/269 (35%), Gaps = 32/269 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ T ++ F + AN GFD Sbjct: 1 MKKVLIAALIAGFSLSATAAET-------------IRFATEASYPPFESIDANNQIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL I + + +L+ ++++ + D T RE + Sbjct: 48 VDLAQALCKEIDATCT---FSNQAFDSLIPSLKFRRVEAVMAGMDITPEREKQVLFTN-- 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+D + ++ +SV QL G + VQ GTT + + D + + + ++ + Sbjct: 103 -PYYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFIMD----KHPEITTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + D P + + K L A+ QG+TE Sbjct: 158 NAKLDLQNGRIDGVFGDTAVVTEWLK--DNPKLAAVGDKVTDKDYFGTGLGIAVRQGNTE 215 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVS 265 ++ A+ ++ G + N+ Sbjct: 216 LQQKLN---TALEKVKKDGTYETIYNKWF 241 >gi|217424367|ref|ZP_03455866.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia pseudomallei 576] gi|217392832|gb|EEC32855.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia pseudomallei 576] Length = 250 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 46/267 (17%), Positives = 91/267 (34%), Gaps = 25/267 (9%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + F +I+ L ++ ++ +A L G +T + F + + + GFD+ Sbjct: 3 RRSFIKTIVALALVGASAAGAHA---------KELVVGTDTSFMPFEFKQGD-KYVGFDL 52 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D ++ + P++ ALQ++ ID+ R ++ Sbjct: 53 DLWAEIAK---GAGWTYKIQPMDFAGLIPALQTQNIDVALSGMTNKEERRKAIDF--SDP 107 Query: 122 TYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G ++ I S+ L+G I + GT T D+ KAH F ++ Sbjct: 108 YYDSGLAAMVQANNTTIKSIDDLNGKVIAAKTGTATI----DWIKAHLKPKEIRQFPNID 163 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A A R DA D + + N+ + +S +G + Sbjct: 164 QAYLALEAGRVDAAMHDTPNVL-FFVNNEGKGRVKVAGAPVSGDKYGIGFPKGSP----L 218 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKD 267 V+ + + + G K + Sbjct: 219 VAKVNAELARMKADGRYAKIYKKWFGS 245 >gi|154502489|ref|ZP_02039549.1| hypothetical protein RUMGNA_00302 [Ruminococcus gnavus ATCC 29149] gi|153796885|gb|EDN79305.1| hypothetical protein RUMGNA_00302 [Ruminococcus gnavus ATCC 29149] Length = 276 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 42/266 (15%), Positives = 86/266 (32%), Gaps = 22/266 (8%) Query: 1 MYKDFFVSILCLIILFFT---------SFSTNASILGDIKKRGFLKCGINTGLVGFAEVK 51 M K + + + + +A ++ + G + + + Sbjct: 1 MKKKLALILAGTAMAAMVLAGCGEKNNASGEDAKTAESVEDKKTFTVGFDAEYPPYGYMD 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 NG++ GFD++ A+ + K PLN + + L S ID + Sbjct: 61 ENGEYTGFDLELAEAVCKLEGWELVK---KPLNWDSKDMELNSGSIDCIWNGFTMN---G 114 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F + Q ++ +K GI ++ L+G ++ VQA + L + K Sbjct: 115 REDDYTFSTPYVDNSQVIVVAEKSGIDTLEDLAGKTVGVQAASAALDLLQSEEEGGQKKL 174 Query: 172 -----HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 F +A DA D+ + R + IL + ++ Sbjct: 175 ADTFGALNEFADYNTAFTELQAGALDALAIDVGVANYQIKS--RGEGYKILDETLNTEQY 232 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAE 252 A +G+ E ++V+ + Sbjct: 233 AIGFKKGNQELCDVVNADLKKLTEDG 258 >gi|323937970|gb|EGB34232.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli E1520] Length = 243 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 50/269 (18%), Positives = 96/269 (35%), Gaps = 32/269 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ T ++ F + AN GFD Sbjct: 1 MKKVLIAALIAGFSLSATAAET-------------IRFATEASYPPFESIDANNQIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL I + + +L+ ++++ + D T RE + Sbjct: 48 VDLAQALCKEIDATCT---FSNQAFDSLIPSLKFRRVEAVMAGMDITPEREKQVLFT--- 101 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+D + ++ +SV QL G + VQ GTT + + D + + + ++ + Sbjct: 102 TPYYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFIMD----KHPEITTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + D P + + K L A+ QG+TE Sbjct: 158 NAKLDLQNGRIDGVFGDTAVVTEWLK--DNPKLAALGDKVTDKDYFGTGLGIAVRQGNTE 215 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVS 265 ++ A+ ++ G + N+ Sbjct: 216 LQQKLN---TALEKVKKDGTYETIYNKWF 241 >gi|282849349|ref|ZP_06258734.1| putative glutamine ABC transporter periplasmic protein [Veillonella parvula ATCC 17745] gi|282581053|gb|EFB86451.1| putative glutamine ABC transporter periplasmic protein [Veillonella parvula ATCC 17745] Length = 260 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 53/270 (19%), Positives = 101/270 (37%), Gaps = 22/270 (8%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K ++++ + + + N ++ G L+ G T F + + + GFDV Sbjct: 5 KKLTAIALVAVAAMGLLAGCGN-DKPKMTQQEGVLRVGSETTFPPFEFTEGD-KYVGFDV 62 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D A++ + K+++ + A+QS ID+++ + T RE +L + Sbjct: 63 DLSEAIAKKLG---LKMEFKSMGFDALIPAVQSGDIDMIAAGINATPEREKALDFSDV-- 117 Query: 122 TYFDGQGFIM---HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 YFD GFI I ++ +L+G ++ Q GT + Sbjct: 118 -YFDQGGFITVVRKDNTTIHNMDELAGKTVGAQIGTIPVE-----MAQKIPGTTVKQIDS 171 Query: 179 VEEIDAAYRAHRCDAYTGDIS-ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 I +A D D + A+Y LK D + ++ + + +G+ Sbjct: 172 NANIFMELKAGTIDGAIIDNAVAMYYLKQGAD--QDLKLVGEPTKAEGTVLGVKKGNKAL 229 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKD 267 V+ A+ +E G QK N+ D Sbjct: 230 QEAVN---KALKELKEDGTYQKIYNKWFGD 256 >gi|152969397|ref|YP_001334506.1| glutamine ABC transporter periplasmic protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238893865|ref|YP_002918599.1| glutamine ABC transporter periplasmic protein [Klebsiella pneumoniae NTUH-K2044] gi|262041101|ref|ZP_06014319.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|150954246|gb|ABR76276.1| glutamine ABC transporter periplasmic-binding protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238546181|dbj|BAH62532.1| glutamine ABC transport system periplasmic binding component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259041551|gb|EEW42604.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 248 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 52/268 (19%), Positives = 90/268 (33%), Gaps = 24/268 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M F VS+ L + F S L +T V F + + + GFD Sbjct: 1 MKSVFKVSLAALTLAFAVSSHAANKTL---------VVATDTAFVPFEFKQGD-KYVGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A++ + D P++ ALQ+K ID+ T R+ ++ + Sbjct: 51 VDLWAAIAKELKLD---YTLKPMDFSGIIPALQTKNIDLALAGITITDERKKAIDFSDG- 106 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G +++ I V L+G + V++GT + DY KA+ F + Sbjct: 107 -YYKSGLLVMVNANNNDIKDVKDLNGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNI 161 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R DA D + T + + + + A +G E Sbjct: 162 DNAYMELGTGRADAVLHDTPNILYFIKTAGN-GKFKAVGESLEAQNYGIAFPKGSDELRE 220 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKD 267 V+ T + G + + Sbjct: 221 KVNGALK---TLRDNGTYNEIYKKWFGT 245 >gi|300811214|ref|ZP_07091721.1| ABC transporter, permease protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497801|gb|EFK32816.1| ABC transporter, permease protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 485 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 49/258 (18%), Positives = 100/258 (38%), Gaps = 22/258 (8%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG----FDVDFCR 65 L + LF T+ A+ + G + F +G + G D++ R Sbjct: 16 LLIAALFLTAPKAQAAS------KKTYIIGTDQTFKPFEIQDKDGTYNGKNPGIDIEILR 69 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ + K + ++ ALQS QID + T R+ ++ + Y D Sbjct: 70 EIAKH---ENFKYELKIMSFNADVQALQSGQIDGMIAGMSVTEERKKTIDFSNS--YYTD 124 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 G + K I+S+ L G ++ V+ GTT+ + K + + A Sbjct: 125 GVCLAVAKDSKITSMKDLKGKTVNVKTGTTSAIYAKSIQKK--YGFKLKYYTNSNTSWAD 182 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 ++ DA D +L + + I+ +S +PLA A+ +G+ + ++ + Sbjct: 183 VKSGNADACFDDGPSL---RYGIANGTGLRIVGKQVSNAPLAFAVKKGENQ--ELLKMFN 237 Query: 246 YAMVTAEELGITQKNINQ 263 + ++ G +K +N+ Sbjct: 238 DGLAWLKKTGRLKKIVNK 255 >gi|262041043|ref|ZP_06014262.1| arginine ABC superfamily ATP binding cassette transporter [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259041601|gb|EEW42653.1| arginine ABC superfamily ATP binding cassette transporter [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 243 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 47/269 (17%), Positives = 84/269 (31%), Gaps = 32/269 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L + + G++ F + AN GFD Sbjct: 1 MKKLVLAALLTSFAFGAAAAE-------------KISFGVSATYPPFESMDANNQIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + + + + AL+ K+ D + D T R + Sbjct: 48 IDLAHALCKQMQAECT---FTNHAFDSLIPALKFKKYDAVISGMDITPERSKQVAFTD-- 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+ ++ KK S L G I ++ GTT + L D + + + ++ + Sbjct: 103 -PYYANSALVIAKKDTFHSFDDLKGKRIGMENGTTHQKYLQD----KHPEVKTVAYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + T P P + L A+ + Sbjct: 158 NAIIDLKNGRIDGVFGDTAVVNEWLKT--NPQLGAATPKVTDPQYFGTGLGIAVRPDNKA 215 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVS 265 ++ A+ G QK NQ Sbjct: 216 LLEKLNAALKAIKA---DGTYQKISNQWF 241 >gi|91778079|ref|YP_553287.1| polar amino acid ABC transporter periplasmic ligand-binding protein [Burkholderia xenovorans LB400] gi|91690739|gb|ABE33937.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia xenovorans LB400] Length = 251 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 48/272 (17%), Positives = 88/272 (32%), Gaps = 25/272 (9%) Query: 1 MYKDFFVSILCLIILFFT---SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M +S+ C+ S + +A L + NG Sbjct: 1 MKLQRLLSLACVTFAVTFGGFSGAASAQTPD------VLNVATDATFPPMEYT-ENGART 53 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD AL+ A+ ++Q+ ++ K L + + D T R + Sbjct: 54 GFDVDLMNALAKAMGK---RVQWTDIDFKGLIPGLIAHRFDAAISAIYITDERAKVVDFT 110 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y G ++ I +V+ L+G + VQ GT + L D F N + E Sbjct: 111 DS--YYAGGLAVLVKSDSPIKTVADLNGKKVSVQVGTKSVNFLRDNFPQINR----VEVE 164 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + +E+ R DA A Y + T +L ++ A+ + + + Sbjct: 165 KNQEMFDLVGIGRADAAVTGKPAAYQVAKTRTG---FRVLDKTLTTEAYGIAVRKDEPQL 221 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 + A+ + G + + Sbjct: 222 KAAFN---TALARIKADGTYAAIARKWFGASA 250 >gi|319780315|ref|YP_004139791.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166203|gb|ADV09741.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 268 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 48/277 (17%), Positives = 94/277 (33%), Gaps = 23/277 (8%) Query: 3 KDFFVSILCLIILFFTSF-----STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 + F SI +++L F + +A L DI K G + G+ F+ A+ K Sbjct: 4 RKTFASIAAVLMLGTAGFGLAVQAASADALADITKAGTINVGVFADFPPFSSASADMSLK 63 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G+D+D + ++ + K+ + + + R L ++D+L +E + Sbjct: 64 GYDMDVAQYIADTL---KVKLNPIAVTGQNRIPYLNDHRVDLL---MSVGYSKEREQVID 117 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F I + L+ SI V GT + +L + A F+ Sbjct: 118 FAAAYAPYYIAVIGPAALAVKGKEDLADKSIAVNRGTLEDTSLTEAAPA---SADIKRFD 174 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTND--RPSEHVILPDIISKSPLAPAIIQGDT 235 + A+ + + + D +P + + SP + + + Sbjct: 175 NYNSVIQAFISGQTQLMVVGNDVGAQVLAKQDALKPEQ----KFQLLTSPSHIGLNKNED 230 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272 V+ M+ +L + K K NPD Sbjct: 231 GLKKAVNDAVAKMLADGKLDESSK---AWLKTPLNPD 264 >gi|271968291|ref|YP_003342487.1| serine/threonine protein kinase-like protein [Streptosporangium roseum DSM 43021] gi|270511466|gb|ACZ89744.1| Serine/threonine protein kinase-like protein [Streptosporangium roseum DSM 43021] Length = 600 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 44/240 (18%), Positives = 81/240 (33%), Gaps = 15/240 (6%) Query: 18 TSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72 T S L IK G L+ G G G + GF+V+ ++ A+ Sbjct: 343 TPTPAPESTVRSPLLDRIKAGGVLRVGYRDGFPGVS---LGVPPTGFEVEVAEYIARALK 399 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 K++++P+ +R A++ ++D++ N + A Y + ++ Sbjct: 400 VPEGKVRFVPVGYADREAAVERGKVDLVIANLSIDSADRSRVAFA--GPYYVAHRDVLVR 457 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 IS V L G +C+ AG +T ++D + + + R D Sbjct: 458 AGMKISEVGHLRGKKLCLAAGQSTGSMISDM----GVTFVAVHDNDTSRCANRVADGRAD 513 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 A GD + P I ++ A+ GD ++ AM Sbjct: 514 ALPGDDVLIAGFGARLRGPG-LKIAGIRLTTERYGVALRSGDPRACQAINGAIRAMYADG 572 >gi|167744402|ref|ZP_02417176.1| glutamine ABC transporter periplasmic protein [Burkholderia pseudomallei 14] Length = 250 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 46/267 (17%), Positives = 91/267 (34%), Gaps = 25/267 (9%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + F +I+ L ++ ++ +A L G +T + F + + + GFD+ Sbjct: 3 RRSFIKTIVALALVGASAAGAHA---------KELVVGTDTSFMPFEFKQGD-KYVGFDL 52 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D ++ + P++ ALQ++ ID+ R ++ Sbjct: 53 DLWAEIAK---GAGWTYKVQPMDFAGLIPALQTQNIDVALSGMTIKEERRKAIDF--SDP 107 Query: 122 TYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G ++ I S+ L+G I + GT T D+ KAH F ++ Sbjct: 108 YYDSGLAAMVQANNTTIKSIDDLNGKVIAAKTGTATI----DWIKAHLKPKEIRQFPNID 163 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A A R DA D + + N+ + +S +G + Sbjct: 164 QAYLALEAGRVDAAMHDTPNVL-FFVNNEGKGRAKVAGAPVSGDKYGIGFPKGSP----L 218 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKD 267 V+ + + + G K + Sbjct: 219 VAKVNAELARMKADGRYAKIYKKWFGS 245 >gi|121606331|ref|YP_983660.1| extracellular solute-binding protein [Polaromonas naphthalenivorans CJ2] gi|120595300|gb|ABM38739.1| amino acid ABC transporter substrate-binding protein, PAAT family [Polaromonas naphthalenivorans CJ2] Length = 285 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 35/230 (15%), Positives = 67/230 (29%), Gaps = 10/230 (4%) Query: 37 KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96 G + F G+ GFD+D +A + +++++ + F ++ Sbjct: 51 VVGTDAAYAPFESQNEKGEIVGFDIDVVKAAAQKAG---IEVKFVNTPWEGIFNSVAQGD 107 Query: 97 IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT 156 D+L T R +L + Q + I+ L + VQ GTT Sbjct: 108 RDLLVSAITITPERRQTLDF--SAPYFDAQQLIAVKSDSKIAKFDDLKKLKVGVQNGTTG 165 Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216 + + + FE DA D + N I Sbjct: 166 DEVITKLQGKDSPNVK--RFESTPLALKEMEGGGVDAVVADNGVVVHYVANNPGSKFKTI 223 Query: 217 LPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 + A+ +G+ E ++ + +E G + Q Sbjct: 224 ADSTFAAEQYGIAVKKGNAELLEKINQGLAGI---KEDGSYARIYTQYFG 270 >gi|295697368|ref|YP_003590606.1| extracellular solute-binding protein family 3 [Bacillus tusciae DSM 2912] gi|295412970|gb|ADG07462.1| extracellular solute-binding protein family 3 [Bacillus tusciae DSM 2912] Length = 275 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 39/237 (16%), Positives = 73/237 (30%), Gaps = 11/237 (4%) Query: 37 KCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 G + F V +GFD+D A++ A ++++ K F AL Sbjct: 49 VVGTDAAYAPFESVNPQTNQIEGFDIDLLNAVAKAAGF---QVKFENTPWKGIFQALSIG 105 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 Q DIL T R+ S+ + Q ++ I ++ L G + VQ GTT Sbjct: 106 QRDILISAITITDERKQSMDF--SNPYFQAQQMIVVPPGSPIRTLQDLKGKKVGVQTGTT 163 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215 + + D+ + ++ + DA D + N Sbjct: 164 GDEIVTDFLGKTDPNIK--RYDTTPLALEDLKNKGVDAVVADNGVVLDYIRQNSSKGFEH 221 Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272 K A+ +G+T ++ + + G + + Sbjct: 222 YTDPKFPKEYYGIAVKKGNTALLEKIND---GLAKVKSDGTYDTIYKKYFGSAPPAE 275 >gi|237507558|ref|ZP_04520273.1| glutamine ABC transporter periplasmic protein [Burkholderia pseudomallei MSHR346] gi|234999763|gb|EEP49187.1| glutamine ABC transporter periplasmic protein [Burkholderia pseudomallei MSHR346] Length = 250 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 47/267 (17%), Positives = 92/267 (34%), Gaps = 25/267 (9%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + F +I+ L ++ ++ +A L G +T + F + + + GFD+ Sbjct: 3 RRSFIKTIVALALVGASAAGAHA---------KELVVGTDTSFMPFEFKQGD-KYVGFDL 52 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D A++ + P++ ALQ++ ID+ R ++ Sbjct: 53 DLWAAIAK---GAGWTYKVQPMDFAGLIPALQTQNIDVALSGMTIKEERRKAIDF--SDP 107 Query: 122 TYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G ++ I S+ L+G I + GT T D+ KAH F ++ Sbjct: 108 YYDSGLAAMVQANNTTIKSIDDLNGKVIAAKTGTATI----DWIKAHLKPKEIRQFPNID 163 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A A R DA D + + N+ + +S +G + Sbjct: 164 QAYLALEAGRVDAAMHDTPNVL-FFVNNEGKGRAKVAGAPVSGDKYGIGFPKGSP----L 218 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKD 267 V+ + + + G K + Sbjct: 219 VAKVNAELARMKADGRYAKIYKKWFGS 245 >gi|229542707|ref|ZP_04431767.1| extracellular solute-binding protein family 3 [Bacillus coagulans 36D1] gi|229327127|gb|EEN92802.1| extracellular solute-binding protein family 3 [Bacillus coagulans 36D1] Length = 255 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 46/260 (17%), Positives = 87/260 (33%), Gaps = 13/260 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++ + S + KK L G + F G+ GFD Sbjct: 1 MKKIVLGIAIVFSMVIAAACGQTNSSKSNTKKEKTLIMGTSADFAPFETRDTAGNVVGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D + ++ + K++ + ALQS ++D++ T R + + F Sbjct: 61 ADLAKYIAKELGY---KLEIKDMKFDGLIGALQSHRVDMVLSGMSATKER--AKNVDFST 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + G+ F+ K + ++ L G ++ VQ GT E + + Sbjct: 116 PYHHSGEMFVTLKGSPVKTLDDLKGKTVGVQLGTIQEEGADKL--KGKYNFTVKKLDNST 173 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAIIQGDTEWYN 239 + + R D S + V D S SP +A A+ +G ++ Sbjct: 174 NLIEELLSKRIQVAYLDKSVAEGYI----KKQNLVGFDDPTSSSPGMAVALPKG-SKLTA 228 Query: 240 IVSWTHYAMVTAEELGITQK 259 V+ +L +K Sbjct: 229 KVNKVLAKAEKNGKLDELRK 248 >gi|26246886|ref|NP_752926.1| arginine-binding periplasmic protein 1 [Escherichia coli CFT073] gi|91209897|ref|YP_539883.1| arginine-binding periplasmic protein 1 [Escherichia coli UTI89] gi|110641064|ref|YP_668794.1| arginine-binding periplasmic protein 1 precursor [Escherichia coli 536] gi|110804860|ref|YP_688380.1| arginine 3rd transport system periplasmic binding protein [Shigella flexneri 5 str. 8401] gi|117623043|ref|YP_851956.1| arginine transporter subunit [Escherichia coli APEC O1] gi|191172067|ref|ZP_03033611.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli F11] gi|193069380|ref|ZP_03050335.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli E110019] gi|194433081|ref|ZP_03065363.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Shigella dysenteriae 1012] gi|215485994|ref|YP_002328425.1| arginine transporter subunit [Escherichia coli O127:H6 str. E2348/69] gi|218557767|ref|YP_002390680.1| arginine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli S88] gi|218688645|ref|YP_002396857.1| arginine ABC transporter subunit periplasmic-binding protein [Escherichia coli ED1a] gi|218699239|ref|YP_002406868.1| arginine ABC transporter subunit periplasmic-binding protein [Escherichia coli IAI39] gi|218704290|ref|YP_002411809.1| arginine ABC transporter periplasmic-binding protein [Escherichia coli UMN026] gi|227884173|ref|ZP_04001978.1| arginine-binding periplasmic protein 1 precursor [Escherichia coli 83972] gi|237707173|ref|ZP_04537654.1| arginine-binding periplasmic protein 1 [Escherichia sp. 3_2_53FAA] gi|293404168|ref|ZP_06648162.1| arginine ABC transporter [Escherichia coli FVEC1412] gi|293409238|ref|ZP_06652814.1| arginine ABC transporter [Escherichia coli B354] gi|298379951|ref|ZP_06989556.1| arginine ABC transporter [Escherichia coli FVEC1302] gi|300901230|ref|ZP_07119331.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 198-1] gi|300935046|ref|ZP_07150078.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 21-1] gi|300991843|ref|ZP_07179668.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 200-1] gi|300993467|ref|ZP_07180409.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 45-1] gi|301020603|ref|ZP_07184680.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 69-1] gi|301051209|ref|ZP_07198038.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 185-1] gi|312969070|ref|ZP_07783277.1| arginine-binding periplasmic protein 1 [Escherichia coli 2362-75] gi|331646131|ref|ZP_08347234.1| arginine-binding periplasmic protein 1 [Escherichia coli M605] gi|331651881|ref|ZP_08352900.1| arginine-binding periplasmic protein 1 [Escherichia coli M718] gi|331656936|ref|ZP_08357898.1| arginine-binding periplasmic protein 1 [Escherichia coli TA206] gi|331662275|ref|ZP_08363198.1| arginine-binding periplasmic protein 1 [Escherichia coli TA143] gi|331682372|ref|ZP_08382991.1| arginine-binding periplasmic protein 1 [Escherichia coli H299] gi|26107286|gb|AAN79469.1|AE016758_73 Arginine-binding periplasmic protein 1 precursor [Escherichia coli CFT073] gi|91071471|gb|ABE06352.1| arginine-binding periplasmic protein 1 precursor [Escherichia coli UTI89] gi|110342656|gb|ABG68893.1| arginine-binding periplasmic protein 1 precursor [Escherichia coli 536] gi|110614408|gb|ABF03075.1| arginine 3rd transport system periplasmic binding protein [Shigella flexneri 5 str. 8401] gi|115512167|gb|ABJ00242.1| arginine transporter subunit [Escherichia coli APEC O1] gi|190907594|gb|EDV67189.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli F11] gi|192957333|gb|EDV87781.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli E110019] gi|194418578|gb|EDX34665.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Shigella dysenteriae 1012] gi|215264066|emb|CAS08408.1| arginine transporter subunit [Escherichia coli O127:H6 str. E2348/69] gi|218364536|emb|CAR02218.1| arginine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli S88] gi|218369225|emb|CAR16980.1| arginine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli IAI39] gi|218426209|emb|CAR07033.1| arginine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli ED1a] gi|218431387|emb|CAR12265.1| arginine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli UMN026] gi|226898383|gb|EEH84642.1| arginine-binding periplasmic protein 1 [Escherichia sp. 3_2_53FAA] gi|227838925|gb|EEJ49391.1| arginine-binding periplasmic protein 1 precursor [Escherichia coli 83972] gi|284920716|emb|CBG33779.1| arginine ABC transporter, substrate-binding protein [Escherichia coli 042] gi|291428754|gb|EFF01779.1| arginine ABC transporter [Escherichia coli FVEC1412] gi|291469706|gb|EFF12190.1| arginine ABC transporter [Escherichia coli B354] gi|294494173|gb|ADE92929.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli IHE3034] gi|298279649|gb|EFI21157.1| arginine ABC transporter [Escherichia coli FVEC1302] gi|300297116|gb|EFJ53501.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 185-1] gi|300305453|gb|EFJ59973.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 200-1] gi|300355304|gb|EFJ71174.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 198-1] gi|300398621|gb|EFJ82159.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 69-1] gi|300406581|gb|EFJ90119.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 45-1] gi|300459709|gb|EFK23202.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 21-1] gi|307552706|gb|ADN45481.1| arginine-binding periplasmic protein 1 precursor [Escherichia coli ABU 83972] gi|312286472|gb|EFR14385.1| arginine-binding periplasmic protein 1 [Escherichia coli 2362-75] gi|315287305|gb|EFU46716.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 110-3] gi|315292538|gb|EFU51890.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 153-1] gi|315299388|gb|EFU58640.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 16-3] gi|320177803|gb|EFW52789.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtI [Shigella boydii ATCC 9905] gi|320196642|gb|EFW71265.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli WV_060327] gi|323190685|gb|EFZ75954.1| arginine-binding periplasmic protein 1 [Escherichia coli RN587/1] gi|323953433|gb|EGB49299.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli H252] gi|323958152|gb|EGB53861.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli H263] gi|324009771|gb|EGB78990.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 57-2] gi|324013025|gb|EGB82244.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 60-1] gi|330910643|gb|EGH39153.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli AA86] gi|331044883|gb|EGI17010.1| arginine-binding periplasmic protein 1 [Escherichia coli M605] gi|331050159|gb|EGI22217.1| arginine-binding periplasmic protein 1 [Escherichia coli M718] gi|331055184|gb|EGI27193.1| arginine-binding periplasmic protein 1 [Escherichia coli TA206] gi|331060697|gb|EGI32661.1| arginine-binding periplasmic protein 1 [Escherichia coli TA143] gi|331080003|gb|EGI51182.1| arginine-binding periplasmic protein 1 [Escherichia coli H299] gi|332088878|gb|EGI93990.1| arginine-binding periplasmic protein 1 [Shigella boydii 5216-82] gi|332091087|gb|EGI96177.1| arginine-binding periplasmic protein 1 [Shigella dysenteriae 155-74] Length = 243 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 50/269 (18%), Positives = 97/269 (36%), Gaps = 32/269 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ T ++ F + AN GFD Sbjct: 1 MKKVLIAALIAGFSLSATAAET-------------IRFATEASYPPFESIDANNQIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL I + + +L+ ++++ + D T RE + Sbjct: 48 VDLAQALCKEIDATCT---FSNQAFDSLIPSLKFRRVEAVMAGMDITPEREKQVLFT--- 101 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+D + ++ +SV QL G + VQ GTT + + D + + + ++ + Sbjct: 102 TPYYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFIMD----KHPEITTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D+ GD + + D P + + K L A+ QG+TE Sbjct: 158 NAKLDLQNGRIDSVFGDTAVVTEWLK--DNPKLAAVGDKVTDKDYFGTGLGIAVRQGNTE 215 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVS 265 ++ A+ ++ G + N+ Sbjct: 216 LQQKLN---TALEKVKKDGTYETIYNKWF 241 >gi|288572816|ref|ZP_06391173.1| extracellular solute-binding protein family 3 [Dethiosulfovibrio peptidovorans DSM 11002] gi|288568557|gb|EFC90114.1| extracellular solute-binding protein family 3 [Dethiosulfovibrio peptidovorans DSM 11002] Length = 253 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 45/254 (17%), Positives = 92/254 (36%), Gaps = 17/254 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + L +S AS + L G + F GFD Sbjct: 1 MKKVLILCMAVLSFFVLSSTVLAASAMDK----DTLLVGTESTFKPFEFRNEENKIVGFD 56 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D ++S + K++ + + +L + +ID+++ T R + +AF Sbjct: 57 IDLINTIASKMGK---KVEIVDMAFDALIPSLLTGKIDMIAAGMSATPER--AKRVAFSD 111 Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Y F + + I+S+ L G + VQ GT + D F + +++ Sbjct: 112 VYYTTPDAFTVKADRTDIASLDDLDGKKVSVQLGT-----IQDAFVSKRKGLEVKRYQKT 166 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD--IISKSPLAPAIIQGDTEW 237 ++ R D D + N ++ + + IS++ +A A+ D E Sbjct: 167 DDAFREVLLGRVDVACVDGTVTKENLKNNKDYTDTLKVAFFHPISQTGMALAMGLEDMEL 226 Query: 238 YNIVSWTHYAMVTA 251 V+ +++ Sbjct: 227 KKNVNAALAEVLSG 240 >gi|307709076|ref|ZP_07645535.1| arginine-binding periplasmic protein 1 [Streptococcus mitis SK564] gi|307620022|gb|EFN99139.1| arginine-binding periplasmic protein 1 [Streptococcus mitis SK564] Length = 271 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 43/276 (15%), Positives = 92/276 (33%), Gaps = 23/276 (8%) Query: 1 MYKDFFVSILCLIILFF------TSFSTNASILGDIKKRGFLKCGINTGLVGF---AEVK 51 M ++ +LC + F + + + S + IK++G L + F + V Sbjct: 1 MKSKKWIFVLCSFLASFFLVACQSGSNGSQSAVEAIKQKGKLVVATSPDYAPFEFQSLVD 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G D+D +A++ + K++ ++ +LQ+ + D+ T R Sbjct: 61 GKNQVVGADIDMAQAIADELG---VKLEISSMSFDNVLTSLQTGKADLAVAGISATDER- 116 Query: 112 ISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 F Y + F++ K ++ L A+I Q GT E + + Sbjct: 117 -KEVFDFSIPYYENKISFLVRKADVEKYKDLTSLESANIAAQKGTVPESMVKEQLPKAQ- 174 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + E +A + DA D + N + + + A A Sbjct: 175 ---LTSLTNMGEAVNELQAGKVDAVHMDEPVALSYAAKNADLAVATVSLKMKDGEANAVA 231 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 + + + +V ++ G Q + + + Sbjct: 232 LRKNSADLKEVVDKVIQ---KLKDDGTYQSYLEKAA 264 >gi|189425081|ref|YP_001952258.1| polar amino acid ABC transporter inner membrane protein [Geobacter lovleyi SZ] gi|189421340|gb|ACD95738.1| polar amino acid ABC transporter, inner membrane subunit [Geobacter lovleyi SZ] Length = 748 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 50/270 (18%), Positives = 102/270 (37%), Gaps = 24/270 (8%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 LK G++ F+ V +G GFD + R ++ + +++ + ALQS Sbjct: 167 LKIGVSATREPFSFVDDHGRVSGFDGELARIIAVKLQRP---VEFFNMKFMALIPALQSG 223 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-----------KKGISSVSQLS 144 ++D++ T R+ ++ + + Q ++ K + +S+++ L Sbjct: 224 KVDLIISGMTATSERKKTVNFTQ--PYFANKQVMLVRKPAVAPLSTVSDRSELSTLNSLK 281 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G ICV G+ E+ F + F + A ++ DA+ D S L L Sbjct: 282 GKRICVLPGSAGEMAARQKFSGSQFQV----FTAAADAALAITTNKADAFVYDKSVLLNL 337 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ-KNINQ 263 N E +IL + K +A A+ + +T + ++ ++ EL + K ++ Sbjct: 338 AEKNP---ELMILDQAVDKLEVAAALRKDNTALLSEMNKALQSLKQEGELQRLRTKWVDT 394 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTK 293 T + + +G L Sbjct: 395 KYTATPQLQPAKAVHTSGVLRMGTCANLEP 424 Score = 70.3 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 29/131 (22%), Positives = 50/131 (38%), Gaps = 7/131 (5%) Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 +K I + A I V G+T E A F +K F+ + + AA ++ Sbjct: 21 CSKNEKLIVGFADAQKARIGVMTGSTGEAVAAKRFPKAQVK----SFDDIMDAVAAIKSG 76 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 + DA AL+++ P E ILP+ + A A+ + + + V A+ Sbjct: 77 QLDAIITLFP--AALQVSKKNP-ELRILPEPLDFEDTAIAVRKDNDQLLATVDRIVAALK 133 Query: 250 TAEELGITQKN 260 L +K Sbjct: 134 ADGTLADMEKR 144 Score = 67.6 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 42/106 (39%), Gaps = 6/106 (5%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 + G L+ G L F+ ++NG G D + + L + KI+ + +N + Sbjct: 406 KAVHTSGVLRMGTCANLEPFSF-QSNGIITGLDRELSQLLGERL---NKKIEIIDMNFEA 461 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 ALQS +ID N + T R+ + + ++ K Sbjct: 462 LIPALQSGKIDFALSNFNVTEERKKLINF--SVPYITNDISVLVRK 505 >gi|260461092|ref|ZP_05809341.1| extracellular solute-binding protein family 3 [Mesorhizobium opportunistum WSM2075] gi|259033126|gb|EEW34388.1| extracellular solute-binding protein family 3 [Mesorhizobium opportunistum WSM2075] Length = 269 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 47/268 (17%), Positives = 90/268 (33%), Gaps = 18/268 (6%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V +L + + + NA L DI K G + G+ F+ A+ KG+D+D + Sbjct: 14 VLVLGAAGMGSATQAANADALADITKAGSINVGVFADFPPFSSASADMSLKGYDMDVAQY 73 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 ++ + K+ + + + R L ++DIL +E + F Sbjct: 74 IADTL---KVKLNPVAVTGQNRIPYLNDHRVDIL---MSVGYSKEREQVIDFAAAYAPYY 127 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 I + L+ SI V GT + +L + A F+ + A+ Sbjct: 128 IAVIGPAAMAVKGKEDLADKSIAVNRGTLEDTSLTEAAPA---SADIKRFDNYNSVIQAF 184 Query: 187 RAHRCDAYTGDISALYALKLTND--RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + + + D +P + + SP + + + V+ Sbjct: 185 ISGQTQLMVVGNDVGAQVLAKQDALKPEQ----KFQLLTSPSHIGLNKNEDALKKAVNDA 240 Query: 245 HYAMVTAEELGITQKNINQVSKDTTNPD 272 M+ +L + K K NPD Sbjct: 241 IAKMLADGKLDESSK---AWLKTPLNPD 265 >gi|319940985|ref|ZP_08015322.1| amino acid ABC transport system periplasmic binding component [Sutterella wadsworthensis 3_1_45B] gi|319805558|gb|EFW02353.1| amino acid ABC transport system periplasmic binding component [Sutterella wadsworthensis 3_1_45B] Length = 258 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 37/226 (16%), Positives = 75/226 (33%), Gaps = 8/226 (3%) Query: 37 KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96 G F N + GFD+D +A++ A D ++++ F AL + Sbjct: 28 TVGTGATYRPFEYEAPNKEIVGFDIDLMKAIAKAQGFD---VEFVNTTWSTIFPALNNGD 84 Query: 97 IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT 156 DI+ T R+ ++ + + Q + I S+ L G I V + Sbjct: 85 RDIIMSGITITDKRKEAVDFSE--PYFLAHQLILTSSNLQIKSLKDLEGKLIAVVNASAG 142 Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216 ++ ++ F + F+ DA GD+ L N + Sbjct: 143 DVAASNAFGKASTNIR--RFDNTPLALEELANGGVDAMIGDVGVLQWYMKQNPDKKFNQC 200 Query: 217 LPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQKNI 261 + + +G+T+ N V+ ++ + + +K Sbjct: 201 RDPEFQEQYFGIGVRKGNTQVLNDVNAGLKKVIESGAYNEVYRKWF 246 >gi|207856322|ref|YP_002242973.1| arginine-binding periplasmic protein 1 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|206708125|emb|CAR32418.1| arginine-binding periplasmic protein 1 precursor [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] Length = 243 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 50/267 (18%), Positives = 94/267 (35%), Gaps = 28/267 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ T ++ F + AN GFD Sbjct: 1 MKKVLIAALIAGFSLSATAAQT-------------IRFATEASYPPFESMDANNKIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL I + + +L+ ++ + + D T RE + Sbjct: 48 VDLANALCKEIDASCT---FTNQAFDGLIPSLKFRRFNAVMAGMDITPEREKQVLFT--- 101 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+D + ++ +SV QL G + VQ GTT + + D + + + ++ + Sbjct: 102 TPYYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFIMD----KHPEITTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R DA GD + + N + P + + L A+ QG+TE Sbjct: 158 NAKLDLQNGRIDAVFGDTAVVTEWLKANPKLAPVGDKVTDKDYFGTGLGIAVRQGNTELQ 217 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVS 265 + A+ ++ G + N+ Sbjct: 218 QKFN---TALEKVKKDGTYETIYNKWF 241 >gi|157146550|ref|YP_001453869.1| glutamine ABC transporter periplasmic protein [Citrobacter koseri ATCC BAA-895] gi|157083755|gb|ABV13433.1| hypothetical protein CKO_02311 [Citrobacter koseri ATCC BAA-895] Length = 248 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 51/267 (19%), Positives = 88/267 (32%), Gaps = 23/267 (8%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K L + L F S A L +T V F + + + GFDV Sbjct: 1 MKSVLKVSLAALTLAFAVSSHAADK--------KLVVATDTAFVPFEFKQGD-KYVGFDV 51 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D A++ + D P++ ALQ+K +D+ T R+ ++ + Sbjct: 52 DLWAAVAKELNLD---YTLKPMDFSGIIPALQTKNVDLALAGITITDERKKAIDFSDG-- 106 Query: 122 TYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G ++ + SV L G + V++GT + DY KA+ F ++ Sbjct: 107 YYKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNID 162 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +R DA D + T + + + + A +G E Sbjct: 163 NAYMELGTNRADAVLHDTPNILYFIKTAGN-GQFKAVGESLEAQQYGIAFPKGSDELREK 221 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKD 267 V+ T E G + + Sbjct: 222 VNGALK---TLRENGTYNEIYKKWFGT 245 >gi|169832654|ref|YP_001694829.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae Hungary19A-6] gi|168995156|gb|ACA35768.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae Hungary19A-6] Length = 271 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 44/276 (15%), Positives = 93/276 (33%), Gaps = 23/276 (8%) Query: 1 MYKDFFVSILCLIILFF------TSFSTNASILGDIKKRGFLKCGINTGLVGF---AEVK 51 M ++ +LC + F + + + S + IK++G L + F + V Sbjct: 1 MKSKKWIFVLCNFLASFFLVACQSGSNGSQSAVDAIKQKGKLVVATSPDYAPFEFQSLVD 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G D+D +A++ + K++ ++ +LQ+ + D+ T R Sbjct: 61 GKNQVVGADIDMAQAIADELG---VKLEISSMSFDNVLTSLQTGKADLAVAGISATDER- 116 Query: 112 ISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 F Y + F++ K ++ L A+I Q GT E + + Sbjct: 117 -KEVFDFSIPYYENKISFLVRKADVEKYKDLTSLESANIAAQKGTVPESMVKEQLPKAQ- 174 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + E +A + DA D + N + + + A A Sbjct: 175 ---LTSLTNMGEAVNELQAGKVDAVHMDEPVALSYAAKNAGLAVATVSLKMKDGDANAVA 231 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 + + + +V ++ GI Q + + + Sbjct: 232 LRKNSDDLKEVVDKVIQ---KLKDEGIYQSYLEKAA 264 >gi|170020734|ref|YP_001725688.1| cationic amino acid ABC transporter, periplasmic binding protein [Escherichia coli ATCC 8739] gi|169755662|gb|ACA78361.1| cationic amino acid ABC transporter, periplasmic binding protein [Escherichia coli ATCC 8739] Length = 243 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 49/269 (18%), Positives = 95/269 (35%), Gaps = 32/269 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ T ++ F + AN GFD Sbjct: 1 MKKVLIAALIAGFSLSATAAET-------------IRFATEASYPPFESIDANNQIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL I + + +L+ ++++ + D T RE + Sbjct: 48 VDLAQALCKEIDATCT---FSNQAFDSLIPSLKFRRVEAVMAGMDITPEREKQVLFT--- 101 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+D + ++ +SV QL G + VQ GTT + + D + + + ++ + Sbjct: 102 TPYYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFIMD----KHPEITTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + P + + K L A+ QG+TE Sbjct: 158 NAKLDLQNGRIDGVFGDTAVVTEWLKN--NPKLAAVGDKVTDKDYFGTGLGIAVRQGNTE 215 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVS 265 ++ A+ ++ G + N+ Sbjct: 216 LQQKLN---TALEKVKKDGTYETIYNKWF 241 >gi|291437322|ref|ZP_06576712.1| secreted protein [Streptomyces ghanaensis ATCC 14672] gi|291340217|gb|EFE67173.1| secreted protein [Streptomyces ghanaensis ATCC 14672] Length = 368 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 53/265 (20%), Positives = 94/265 (35%), Gaps = 22/265 (8%) Query: 16 FFTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 TS + A L I+ +G +K G + +G G D D AL + Sbjct: 96 ASTSAAPLADKLPQAIRDKGVVKVGSDIAYAPVEFKDDSGKTVGIDPDVAAALGKQLG-- 153 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE----------ISLGLAFRPITYF 124 K ++ L+SK+ DI T R+ + G+ F + Sbjct: 154 -VKFEFENGTFDTLITGLRSKRYDIAMSAMTDTKDRQEGIDSETGKKVGEGVDFVD-YFT 211 Query: 125 DGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKA--HNMKYHPIVFERVE 180 G K +GI + S L G I VQ GT +E + K F+ + Sbjct: 212 AGVSIYTKKGDDQGIKTWSDLCGKKIVVQRGTVSEDLAKAENEKCPTGKKIAIEAFDNDQ 271 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + RA +A + D T+ ++ ++ + + +P AI + +T+ + Sbjct: 272 QAQTRLRAGGANAGSSDFPVAAYAVKTSGGGNDFQLVGEQVEAAPYGIAIAKDNTQLRDA 331 Query: 241 VSWTHYAMVTAEELGITQKNINQVS 265 + A++ E G QK + + Sbjct: 332 IKAALDAII---ENGEYQKILEKWG 353 >gi|149019349|ref|ZP_01834711.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP23-BS72] gi|147931219|gb|EDK82198.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP23-BS72] Length = 309 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 43/278 (15%), Positives = 91/278 (32%), Gaps = 23/278 (8%) Query: 1 MYKDFFVSILCLIILFF------TSFSTNASILGDIKKRGFLKCGINTGLVGF---AEVK 51 M ++ +LC + F + + + S + IK++G L + F + V Sbjct: 1 MKSKKWIFVLCNFLASFFLVACQSGSNGSQSAVDAIKQKGKLVVATSPDYAPFEFQSLVD 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G D+D +A++ + K++ ++ +LQ+ + D+ T R Sbjct: 61 GKNQVVGADIDMAQAIADELG---VKLEISSMSFDNVLTSLQTGKADLAVAGISATDER- 116 Query: 112 ISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 F Y + F++ K ++ L A+I Q GT E + + Sbjct: 117 -KEVFDFSIPYYENKISFLVRKADVEKYKDLTSLESANIAAQKGTVPESMVKEQLPKAQ- 174 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + E + + DA D + N + + + A A Sbjct: 175 ---LTSLTNMGEAVNELQVGKVDAVHMDEPVALSYAAKNAGLAVATVSLKMKDGDANAVA 231 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 + + + +V ++ G Q + + D Sbjct: 232 LRKNSDDLKEVVDKVIQ---KLKDEGTYQSYLEKAELD 266 >gi|170690739|ref|ZP_02881905.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] gi|170143988|gb|EDT12150.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] Length = 250 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 46/268 (17%), Positives = 90/268 (33%), Gaps = 24/268 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + F+ + LF ++ + L G +T + F + + + GFD Sbjct: 1 MVRRVFLMSVVAAALFGSALARA--------DTKELVVGTDTSFMPFEFKQGD-KYVGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D ++ + K + P++ ALQ++ ID+ R ++ Sbjct: 52 LDLWAEIAKDLG---WKYKVQPMDFSGLIPALQTQNIDVALSGMTIKEERRKAIDF--SD 106 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G ++ I S+ L+G I + GT T D+ KAH F + Sbjct: 107 PYYDSGLAAMVQSGNTSIRSIDDLNGKVIAAKTGTATI----DWIKAHLKPKEIRQFPNI 162 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 ++ A A R DA D + T + + + +S +G Sbjct: 163 DQAYLALEAGRVDAAMHDTPNVLYFASTAGK-GKVKVAGTPVSGDKYGIGFPKGSP---- 217 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKD 267 +V+ + + + G + Sbjct: 218 LVASVNAELAKMKADGRYATLYKKWFGS 245 >gi|148985460|ref|ZP_01818665.1| hypothetical protein CGSSp3BS71_08436 [Streptococcus pneumoniae SP3-BS71] gi|147922418|gb|EDK73538.1| hypothetical protein CGSSp3BS71_08436 [Streptococcus pneumoniae SP3-BS71] gi|301799279|emb|CBW31802.1| putative extracellular amino acid-binding protein [Streptococcus pneumoniae OXC141] Length = 268 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 46/274 (16%), Positives = 90/274 (32%), Gaps = 18/274 (6%) Query: 1 MYKDFFVSI-LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56 M K L ++ L F + ++ + IK +G L +N F V Sbjct: 4 MKKVLMTMFGLVMLPLLFACSNNQSAGIEAIKSKGKLVVALNPDFAPFEYQKVVDGKNQI 63 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G D++ +A+++ + + ++ P++ ++QS + D+ T R S Sbjct: 64 VGSDIELAKAIATELGVE---LELSPMSFDNVLASVQSGKADLAISGVSKTDER--SKVF 118 Query: 117 AFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F Y I+ K SV+ L+ + Q G+ E D + Sbjct: 119 DFSTPYYTAKNKLIVKKSDLATYQSVNDLAQKKVGAQNGSIQETMAKDLL----QNSSLV 174 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + ++ + DA + N + + + A A+ + Sbjct: 175 SLPKNGNLITDLKSGQVDAVIFEEPVAKGFVENNPDLAIADLNFEKEQDDSYAVAMKKDS 234 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 E V T + + EL K I K + Sbjct: 235 KELKEAVDKTIQKLKKSGELD---KLIEDAFKAS 265 >gi|227544221|ref|ZP_03974270.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri CF48-3A] gi|227185792|gb|EEI65863.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri CF48-3A] Length = 256 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 38/231 (16%), Positives = 82/231 (35%), Gaps = 9/231 (3%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 T + I++R + G++ V + NG G+DVD RA+ Sbjct: 31 SVTKRADTQDTWNRIERRKRVIVGLDDSFVPMDFRQKNGKLVGYDVDLARAVFKQYG--- 87 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 K+ + P++ + L++ ID+L R + + + Q + KK Sbjct: 88 IKVDFQPIDWSMKETELKNGTIDLLWNGYSVNPSRAKKVAFSR--YYLENRQILVTKKKS 145 Query: 136 GISSVSQLSGASICVQAGTTTELTLAD---YFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 I +++ ++G ++ VQ G+T L + K + P++++ A+R Sbjct: 146 NIKNLNGMTGKTLGVQNGSTGVTVLDEKPKLLKDKIKHHTPVLYDTFPNAFIDLNANRIQ 205 Query: 193 AYTGDISALYALKLTNDRPSEHVI-LPDIISKSPLAPAIIQGDTEWYNIVS 242 D + + + + A + +GD ++ Sbjct: 206 GILMDEVYANYYIKHQPNSNSYRTYISKELPMEHFAVGMRKGDKTLKKKIN 256 >gi|239928983|ref|ZP_04685936.1| secreted protein [Streptomyces ghanaensis ATCC 14672] Length = 348 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 53/265 (20%), Positives = 94/265 (35%), Gaps = 22/265 (8%) Query: 16 FFTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 TS + A L I+ +G +K G + +G G D D AL + Sbjct: 76 ASTSAAPLADKLPQAIRDKGVVKVGSDIAYAPVEFKDDSGKTVGIDPDVAAALGKQLG-- 133 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE----------ISLGLAFRPITYF 124 K ++ L+SK+ DI T R+ + G+ F + Sbjct: 134 -VKFEFENGTFDTLITGLRSKRYDIAMSAMTDTKDRQEGIDSETGKKVGEGVDFVD-YFT 191 Query: 125 DGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKA--HNMKYHPIVFERVE 180 G K +GI + S L G I VQ GT +E + K F+ + Sbjct: 192 AGVSIYTKKGDDQGIKTWSDLCGKKIVVQRGTVSEDLAKAENEKCPTGKKIAIEAFDNDQ 251 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + RA +A + D T+ ++ ++ + + +P AI + +T+ + Sbjct: 252 QAQTRLRAGGANAGSSDFPVAAYAVKTSGGGNDFQLVGEQVEAAPYGIAIAKDNTQLRDA 311 Query: 241 VSWTHYAMVTAEELGITQKNINQVS 265 + A++ E G QK + + Sbjct: 312 IKAALDAII---ENGEYQKILEKWG 333 >gi|225853737|ref|YP_002735249.1| ABC transporter solute-binding protein - amino acid transport [Streptococcus pneumoniae JJA] gi|225722793|gb|ACO18646.1| ABC transporter solute-binding protein - amino acid transport [Streptococcus pneumoniae JJA] Length = 268 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 45/274 (16%), Positives = 92/274 (33%), Gaps = 18/274 (6%) Query: 1 MYKDFFVSI-LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56 M K L ++ L F + ++ + IK +G L +N F V Sbjct: 4 MKKVLMTMFGLVMLPLLFACSNNQSAGIEAIKSKGKLVVALNPDFAPFEYQKVVDGKNQI 63 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G D++ +A+++ + + ++ P++ ++QS + D+ T R S Sbjct: 64 VGSDIELAKAIATELGVE---LELSPMSFDNVLASVQSGKADLAISGVSKTDER--SKVF 118 Query: 117 AFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F Y I+ K ++ SV+ L+ + Q G+ E D + Sbjct: 119 DFSIPYYTAKNKLIVKKSDLVTYQSVNDLAQKKVGAQKGSIQETMAKDLL----QNSSLV 174 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + ++ + DA + N + + + + A+ + Sbjct: 175 SLPKNGNLITDLKSGQVDAVIFEEPVAKGFVENNPDLAIADLNFEKEQDDSYSVAMKKDS 234 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 E V T + + EL K I K + Sbjct: 235 KELKEAVDKTIQKLKESGELD---KLIEDAFKAS 265 >gi|296117710|ref|ZP_06836294.1| glutamate-binding protein [Corynebacterium ammoniagenes DSM 20306] gi|295969441|gb|EFG82682.1| glutamate-binding protein [Corynebacterium ammoniagenes DSM 20306] Length = 292 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 42/271 (15%), Positives = 88/271 (32%), Gaps = 20/271 (7%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 +S L + + +LG I + G + G G + +G G DVD Sbjct: 14 SVAISGSLLAACGDSGGGDSEGLLGSI-EAGNVTLGTKFDQPGLGLREPDGSMTGLDVDV 72 Query: 64 CRALSSAI----FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 + ++I + I + + +R +Q+ ++D+++ R S + F Sbjct: 73 ATYVVNSIAEENGWEEPSIDWREAPSAQRETLIQNGEVDMITATYSINPGR--SESVNFG 130 Query: 120 PITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Q ++ IS + L G +C G+T + + ++ Sbjct: 131 GPYLLTHQALLLQDGNDEISGLDDLDGKILCSVTGSTPAQKVKEALP----TVQLQEYDT 186 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL-----PDIISKSPLAPAIIQG 233 A R DA T D + L + P ++ + + + + Sbjct: 187 YSSCTEALRQGNVDAMTTDATILNGYAAQS--PGNFRVVELEQDGEPFTNEYYGIGLTKD 244 Query: 234 DTEWYNIVSWTHYAMVTAEELG-ITQKNINQ 263 D E + ++ AM+ N+ + Sbjct: 245 DEEGTDAINTALQAMIDDGSFDQFISDNLGE 275 >gi|306824969|ref|ZP_07458312.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding protein [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432796|gb|EFM35769.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding protein [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 271 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 51/277 (18%), Positives = 97/277 (35%), Gaps = 21/277 (7%) Query: 2 YKDFFV--SILCLIILFFTSFSTNASI--LGDIKKRGFLKCGINTGLVGF---AEVKANG 54 K V S+L +IL ST++S + IK++G L + F + V Sbjct: 4 KKWILVVCSMLASVILVACQSSTDSSQSAVDAIKQKGKLVVATSPDYAPFEFQSLVDGKN 63 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G D+D +A++ + K++ ++ +LQ+ + D+ T R Sbjct: 64 QVVGADIDMAQAIADELG---VKLEISSMSFDNVLTSLQTGKADLAIAGISATDER--KE 118 Query: 115 GLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 F Y + F++ K +S L+ A+I Q GT E + + Sbjct: 119 VFDFSIPYYENKMSFLVRKSDLDKYKDLSSLASANIAAQKGTVPETMVKEQLPNAQ---- 174 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + E +A + DA D + N + + + A AI + Sbjct: 175 LTSLTNMGEAVNELQAGKVDAVHMDEPVALSYAGKNSDLAVATVNLTMKDGEANAVAIKK 234 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 ++ +V ++ G Q + + +K T Sbjct: 235 DQSDLKAVVDKVIQ---KLKDDGTYQSYLEKAAKLTE 268 >gi|46199113|ref|YP_004780.1| amino acid ABC transporter, binding protein [Thermus thermophilus HB27] gi|46196737|gb|AAS81153.1| amino acid ABC transporter, binding protein [Thermus thermophilus HB27] Length = 254 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 37/237 (15%), Positives = 85/237 (35%), Gaps = 12/237 (5%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 +IK+ G ++ G F GF+VD A++ + P +++ + Sbjct: 24 EEIKRSGEIRIGTEGAFPPFNYFDERNQLTGFEVDLGNAIAERLGLKP---RWIAQSFDT 80 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 + L + D + + T R ++ ++ G I+ +K G + L G Sbjct: 81 LLIQLNQGRFDFVIASHGITEERARAVDFTN---PHYCTGGVIVSRKGGPRTAKDLQGKV 137 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 + VQ GTT ++R + A R D + D + + Sbjct: 138 VGVQVGTTYMEAAQKIPGIK----EVRTYQRDPDALQDLLAGRIDTWITDR-FVAKEAIK 192 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQKNINQ 263 + + + +++ + +A A+ +G+ + ++ ++ I+QK + Sbjct: 193 ERKLENTLQVGELVFQERVAMAVAKGNKSLLDALNRALAELMQDGTYARISQKWFGE 249 >gi|262041040|ref|ZP_06014259.1| arginine ABC superfamily ATP binding cassette transporter [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259041598|gb|EEW42650.1| arginine ABC superfamily ATP binding cassette transporter [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 250 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 52/269 (19%), Positives = 97/269 (36%), Gaps = 32/269 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L +L S S +A+ ++ F V AN GFD Sbjct: 8 MKK-----VLIAALLAGMSLSASAAQ--------TIRFATEASYPPFELVDANNQIVGFD 54 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL I + + L+ ++ D + D T RE + + Sbjct: 55 VDLANALCKEIDATCT---FTNQAFDSLIPGLKFRRFDAVMAGMDITPEREKQVLFS--- 108 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y++ + ++ +S+ QL G + VQ GTT + + D + + + ++ + Sbjct: 109 TPYYNNSALFVGQQGKFTSIDQLKGKKVGVQNGTTHQKFITD----KHPEITTVPYDSYQ 164 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R DA GD + + + P + + K+ L A+ QG+T+ Sbjct: 165 NAKLDLQNGRIDAVFGDTAVVTEWLKS--NPKLAAVGDKVTDKAYFGTGLGIAVRQGNTD 222 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVS 265 + A+ ++ G Q N+ Sbjct: 223 LQQKFN---AALEKVKKDGTYQTIYNKWF 248 >gi|222032592|emb|CAP75331.1| Arginine-binding periplasmic protein 1 [Escherichia coli LF82] gi|312945380|gb|ADR26207.1| arginine transporter subunit; periplasmic-binding component of ABC superfamily protein [Escherichia coli O83:H1 str. NRG 857C] Length = 243 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 51/269 (18%), Positives = 97/269 (36%), Gaps = 32/269 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ T ++ F + AN GFD Sbjct: 1 MKKVLIAALIAGFSLSATAAET-------------IRFATEASYPPFESIDANNQIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL I + + +L+ ++I+ + D T RE + Sbjct: 48 VDLAQALCKEIDATCT---FSNQAFDSLIPSLKFRRIEAVMAGMDITPEREKQVLFT--- 101 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+D + ++ +SV QL G + VQ GTT + + D + + + ++ + Sbjct: 102 TPYYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFIMD----KHPEITTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D+ GD + + D P + + K L A+ QG+TE Sbjct: 158 NAKLDLQNGRIDSVFGDTAVVTEWLK--DNPKLAAVGDKVTDKDYFGTGLGIAVRQGNTE 215 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVS 265 ++ A+ ++ G + N+ Sbjct: 216 LQQKLN---TALEKVKKDGTYETIYNKWF 241 >gi|161503951|ref|YP_001571063.1| hypothetical protein SARI_02043 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160865298|gb|ABX21921.1| hypothetical protein SARI_02043 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 243 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 43/267 (16%), Positives = 89/267 (33%), Gaps = 28/267 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L + + G++ F + A+ GFD Sbjct: 1 MKKLVLAALLASFATGSIAAE-------------KINFGVSATYPPFESLDASNKIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + + + + AL+ ++ D + D T R + + Sbjct: 48 IDLATALCKQMQAECT---FTNHAFDSLIPALKFRKYDAVISGMDITPERSKQVAFSN-- 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+ ++ KK + + L G I ++ GTT + L D + + + ++ + Sbjct: 103 -PYYANSALVIAKKDTYKTFADLKGKRIGMENGTTHQKYLQD----KHPEVKTVAYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R D GD + + TN + P+ + + L A+ + Sbjct: 158 NAIIDLKNGRIDGVFGDTAVVNEWLKTNPQLGPATEKVTDPQYFGTGLGIAVRPDNKALL 217 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVS 265 ++ A+ G QK +Q Sbjct: 218 EKLNNALTAIKA---DGTYQKISDQWF 241 >gi|25029144|ref|NP_739198.1| putative amino acid ABC transporter glutamin-binding protein [Corynebacterium efficiens YS-314] gi|23494431|dbj|BAC19398.1| putative amino acid ABC transporter glutamin-binding protein [Corynebacterium efficiens YS-314] Length = 368 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 42/241 (17%), Positives = 85/241 (35%), Gaps = 12/241 (4%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 +I +RG L G++ + +G +GF+V + ++ IF +P + + + A + Sbjct: 106 EIFQRGRLIVGVDQSKNLLSFRDPVSGQLRGFEVQLAKEIARDIFGNPEAVDFRFIEAGD 165 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 L +D++ R+ T R + ++ GI + L+G + Sbjct: 166 SLRGLSRGDVDMVIRSVSVTEDRLRRMEF--STPYMRTQTRLLVMDNSGIQGIEDLAGNT 223 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 +CV G+T + + + A + + A GD + L + Sbjct: 224 VCVADGSTALQKTRAMAPESS----ILRTRNWSDCLMALQQQQAQAILGDDAVLAGIAAQ 279 Query: 208 NDRPSEHVILPDIISKSPLAPAI--IQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 + ILP I++ A AI + + +V + M +E N Sbjct: 280 DP---YTRILPSILAWESYAVAIAPSRASRDTTGLVRQVNATMERIQEDTTWWSMFNDWF 336 Query: 266 K 266 Sbjct: 337 G 337 >gi|260222554|emb|CBA32231.1| hypothetical protein Csp_D31100 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 265 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 51/260 (19%), Positives = 87/260 (33%), Gaps = 12/260 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + K F L L S + L DI K LK + T + V + G D Sbjct: 5 LNKRTFALALATGALLAASGVQAQTALDDILKAKVLKVAVQTDSAPYGFVGTDLKPIGLD 64 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + + + + R ALQ+K+ D++ RE + + Sbjct: 65 IDMANLIGKKLGVPVEL---VVVVSASRIPALQTKKADLVIATLGKNPDREKVIDFSSAY 121 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +F Q K + S + L+G S+ V G + L FE Sbjct: 122 SPFF--QAVFGPKNIPVKSFADLAGKSVGVTRGAMEDQELGKVAP---TGVDTKRFEDNN 176 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AA+ A + S + N + +E+ +L + SP I +G+ + Sbjct: 177 ATIAAFTAGQVQFVALGASVAGNMMTKNPQLSAEYKLL---LKDSPNFIGIAKGEDKLKA 233 Query: 240 IVSWTHYAMVTAEELGITQK 259 V+ + EL K Sbjct: 234 KVNEIIADAKKSGELEAMAK 253 >gi|194738205|ref|YP_002117295.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194713707|gb|ACF92928.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] Length = 246 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 43/264 (16%), Positives = 89/264 (33%), Gaps = 28/264 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V +L + + S S L G + + V A+ GFD Sbjct: 1 MKKKLIVMLLASLSVHAASVSAR-----------TLHFGTSATYAPYEFVDADNKIVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + + S + + L+ K+ D + D T RE + + Sbjct: 50 IDVANAVCKEMQAECS---FTNQSFDSLIPGLRFKKFDAVIAGMDMTPKREQQVSFSQ-- 104 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y ++ +K + + L G + ++ GTT + L D P+ ++ Sbjct: 105 PYYEGLSAVVVTRKGAYHTFADLKGKKVGLENGTTHQRYLQD----KQQAITPVAYDSYL 160 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235 + +R + GD + A+ ++ I+ + S A+ +G+ Sbjct: 161 NAFTDLKNNRLEGVFGD---VAAIGKWLKNNPDYAIMDERASDPDYYGKGLGIAVRKGND 217 Query: 236 EWYNIVSWTHYAMVTAEELGITQK 259 ++ + + E Q+ Sbjct: 218 ALLQEINAALDKVKASPEYAQMQE 241 >gi|298529733|ref|ZP_07017136.1| extracellular solute-binding protein family 3 [Desulfonatronospira thiodismutans ASO3-1] gi|298511169|gb|EFI35072.1| extracellular solute-binding protein family 3 [Desulfonatronospira thiodismutans ASO3-1] Length = 260 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 50/269 (18%), Positives = 98/269 (36%), Gaps = 25/269 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + F+++ L L+ + ++ A R ++ G F + + G+ KGFD Sbjct: 1 MRRFFYITALVLLGCMLLAGTSLA--------RDKVRIGTEGAYPPFNYMDSQGNLKGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL A + +++ + AL ++ D + + T R+ + + Sbjct: 53 IDIAKALCEAA---NLECEFVTQSWDGIIPALLARDYDAIIASMSITEERKRRVDFTEK- 108 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y F+ HK + I S L G S+ VQ T + + D F + + Sbjct: 109 -YYQTPARFVKHKDRDIEISKDDLEGLSVGVQRATVSANFINDNF---DDVLDIRSYATQ 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-----LAPAIIQGD 234 EE + + R D D L L ++ + + + + A+ QGD Sbjct: 165 EEANMDIVSGRVDLLFADAVVLQTGFLDSEEGQNYEFVGPSYTDEEWFGEGIGIALRQGD 224 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQ 263 + + + E G Q+ + Sbjct: 225 DDLRETFNQAIQDI---REDGTYQEINDS 250 >gi|327393261|dbj|BAK10683.1| glutamine-binding periplasmic protein precursor GlnH [Pantoea ananatis AJ13355] Length = 248 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 52/271 (19%), Positives = 95/271 (35%), Gaps = 24/271 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M F VS+ L + F S + L +T V F + + + GFD Sbjct: 1 MKSLFNVSVAALALAFSLSATAAE---------KKLIVATDTAFVPFEFKQGD-KYVGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A++ + D P++ ALQ++ +D+ T R+ ++ + Sbjct: 51 VDLWDAIAKELKLD---YTLKPMDFSGIIPALQTRNVDLALAGITITDERKKAIEFSDG- 106 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G ++ + I S++ L+G + V++GT + DY K+H F + Sbjct: 107 -YYKSGLLVMVRNNENDIKSINDLNGKVVAVKSGTGSV----DYAKSHIKTKDLRQFPNI 161 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + +R DA D + T + + D I A +G + Sbjct: 162 DNAYMELGTNRADAVLHDTPNILYFINTAGK-GRFKAVGDSIEAQQYGIAFPKGSDDLRE 220 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 V+ T +E G + + Sbjct: 221 KVNGALK---TLKENGTYNQLYKKWFGTDPK 248 >gi|114707671|ref|ZP_01440566.1| putative amino-acid binding periplasmic protein [Fulvimarina pelagi HTCC2506] gi|114536915|gb|EAU40044.1| putative amino-acid binding periplasmic protein [Fulvimarina pelagi HTCC2506] Length = 264 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 51/265 (19%), Positives = 92/265 (34%), Gaps = 20/265 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ +L S K + G F + A+G+ +GFD Sbjct: 1 MLKILTSTLVSTTLLAAVPALAQESDAD--KDWSNIVVGTEGAYPPFNFLDASGELQGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD RAL + + + S ++ ALQ+ D++ + T RE + + Sbjct: 59 VDIARALCNEMGVECS---FVTQEWDGMIPALQNGNFDLIVASMSITPEREEQIDFTNK- 114 Query: 121 ITYFDGQGFIMHKKKGISSVSQ--LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y + K I+ ++ LSG +I Q TT +YF + Sbjct: 115 -YYNTPPAVAVLKDSDITDATEEALSGKTIGAQVSTTHARAAEEYFPDA----EVRQYPS 169 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRP--SEHVILP--DIISKSPLAPAIIQGD 234 EE + R DA D+ L + LP + I + + + + Sbjct: 170 AEEYKLDIESGRVDAVLDDVVVLDQWLKSEAGACCKLLGTLPAEEQIYGEGIGIGLRKDN 229 Query: 235 TEWYNIVSWTHYAMVTAEELGITQK 259 + +V+ A+ E G ++ Sbjct: 230 EKLQGMVNEAIAAI---REDGTYEE 251 >gi|325205656|gb|ADZ01109.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria meningitidis M04-240196] Length = 268 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 45/220 (20%), Positives = 79/220 (35%), Gaps = 10/220 (4%) Query: 37 KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96 + N F + + G+ +GFDVD A++ A KI++ F AL + Sbjct: 40 RVAANAEFAPFESLDSKGNVEGFDVDLMNAMAKA---GNFKIEFKHQPWDSLFPALNNGD 96 Query: 97 IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTT 155 D++ T R+ S+ + Q ++ K K ISS L + V G T Sbjct: 97 ADVVMSGVTITDDRKQSMDF--SDPYFEITQVVLVPKGKKISSSDDLKNMNKVGVVTGYT 154 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS-EH 214 + +++ N FE V I D+ D + + N + Sbjct: 155 GDFSVSKLLG--NDNPKIARFENVPLIIKELENGGLDSVVSDSAVIANYVKNNPAKGMDF 212 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 V LPD + A+ +GD +++ + + E Sbjct: 213 VTLPD-FTTEHYGIAVRKGDEATVKMLNDALEKVRESGEY 251 >gi|299822124|ref|ZP_07054010.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Listeria grayi DSM 20601] gi|299815653|gb|EFI82891.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Listeria grayi DSM 20601] Length = 487 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 48/277 (17%), Positives = 95/277 (34%), Gaps = 23/277 (8%) Query: 1 MYK----DFFVSILCLIILFFTS--FSTNASI---LGDIKKRGFLKCGINTGLVGFAE-- 49 M K F+++ S ++ A L I+K G L+ G++ + Sbjct: 1 MTKGKSTKLFIALAIFFTFLIPSIHAASAAETDPYLKKIQKNGELRVGLSADYPPYEFHQ 60 Query: 50 -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 +K GFD+ ++ + P +N + AL++ +ID++ T Sbjct: 61 TIKGKDKIVGFDISIADKIAKDLKVKPV---ITEMNFESLLGALKTGKIDMIISGMSPTP 117 Query: 109 LREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 RE + Q I+ K + S S G + Q TT E + + Sbjct: 118 EREKEVDF--SDTYMRVDQKVIVRKVDQNKFKSTSDFQGVKVGAQKQTTQE----ELAQN 171 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + ++V +I +++ DA + A N + + + Sbjct: 172 ELSGSTVMSLQKVPDIILNLTSNKIDAAVLEGPVADAYVSQNKALAYAKNVKFANGQKDT 231 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 A A+ +G T + V+ + + + L Q N+ Sbjct: 232 AIALPKGSTALQDKVNASIKDIKDSGALKKYQATANK 268 >gi|325499701|gb|EGC97560.1| arginine-binding periplasmic protein 2 precursor [Escherichia fergusonii ECD227] Length = 271 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 47/265 (17%), Positives = 98/265 (36%), Gaps = 30/265 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + V +L L F + + N L G + + V A+ GFD Sbjct: 26 MKQKLLVMLLA--GLSFQATAANTKTL---------HFGTSATYAPYEFVDADNQIVGFD 74 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +A+ + ++ Q+ + L+ K+ D + D T RE + + Sbjct: 75 IDVAKAVCKEM---QAECQFTNQSFDSLIPGLRFKKFDAVIAGMDMTAKREQQVSFSQ-- 129 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y ++ +K +S ++L G I ++ GTT + L D + + ++ Sbjct: 130 PYYEGLSAVVVTRKGAYNSFAELKGKKIGLENGTTHQRYLQD----KQKEITAVAYDSYL 185 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP------LAPAIIQGD 234 +++R D GD + A+ ++ I+ + +K P L A+ +G+ Sbjct: 186 NAFTDLKSNRLDGVFGD---VAAIGKWLKNNPDYAIMDER-AKDPEYYGKGLGIAVRKGN 241 Query: 235 TEWYNIVSWTHYAMVTAEELGITQK 259 ++ + + E Q+ Sbjct: 242 DALLAEINAALDKVKASPEYAKMQE 266 >gi|300313610|ref|YP_003777702.1| amino acid ABC transporter/signal transduction system periplasmic protein/domain-containing protein [Herbaspirillum seropedicae SmR1] gi|300076395|gb|ADJ65794.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain protein [Herbaspirillum seropedicae SmR1] Length = 271 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 34/226 (15%), Positives = 70/226 (30%), Gaps = 8/226 (3%) Query: 37 KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96 G+ + F+ D GFD+D +AL+ I +++++P + F L Sbjct: 50 VVGVESAYAPFSSENEQKDVVGFDIDIMKALAKKIG---IEVKFVPTPFEGFFNFLAQGD 106 Query: 97 IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTT 155 D+L T R+ S+ + + Q + +S + L ++ Q+ T+ Sbjct: 107 RDLLISAITITDERKKSVAFSE--PYFVATQTIALPAADTKVSKMEDLKPLTVGTQSATS 164 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215 + + ++ K F+ + DA D + N Sbjct: 165 GDELVQQVLGKNSAKIK--RFDSTPLALKELESGGVDAVVADEPVVKNYIANNPNSKLRT 222 Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 + K A+ + D E ++ M Sbjct: 223 VTDPSFPKEDYGIAVRKDDPELLAKINKGLAEMKADGSFAAISAQY 268 >gi|209543097|ref|YP_002275326.1| family 3 extracellular solute-binding protein [Gluconacetobacter diazotrophicus PAl 5] gi|209530774|gb|ACI50711.1| extracellular solute-binding protein family 3 [Gluconacetobacter diazotrophicus PAl 5] Length = 281 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 46/270 (17%), Positives = 88/270 (32%), Gaps = 22/270 (8%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 + ++ A L DI+ G L G+N L A + +GFDVD Sbjct: 19 ILAGCVLSLLPLCIGQGAQARALADIRASGHLNIGVNPALPPLAAYDSRNVIEGFDVDVG 78 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 AL++ + P + +P+++ R L + ++D++ T R ++ Y Sbjct: 79 TALAARLGVSP---RLVPVSSSGRIPYLMAGKVDVVLGGLTRTPERAAAIAF--SAPLYA 133 Query: 125 DGQGFIMHKKKGISSVSQLSGASI--CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 + I + + L+ + G+T L + ++ + Sbjct: 134 EEFAIIAPAVSRVGGLDDLASGRVRMVEVRGSTAVPFLRTHAPKA----PILLLGSYPDA 189 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA----PAIIQGDTEWY 238 A R DA D+ L + + I +P A + Q DT+ Sbjct: 190 VRALAQGRGDAMV-DVIEYVGRFLAAEPQAGWTI---QRGFAPAAGEDCVGVAQSDTDLL 245 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDT 268 +V T + G Q + + Sbjct: 246 RVVDGTL---ADLKRDGTIQAAYRRWFGVS 272 >gi|161870463|ref|YP_001599635.1| polar amino acid transport system substrate-binding protein [Neisseria meningitidis 053442] gi|161596016|gb|ABX73676.1| polar amino acid transport system substrate-binding protein [Neisseria meningitidis 053442] Length = 268 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 45/220 (20%), Positives = 79/220 (35%), Gaps = 10/220 (4%) Query: 37 KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96 + N F + + G+ +GFDVD A++ A KI++ F AL + Sbjct: 40 RVASNAEFAPFESLDSKGNVEGFDVDLMNAMAKA---GNFKIEFKHQPWDSLFPALNNGD 96 Query: 97 IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTT 155 D++ T R+ S+ + Q ++ K K ISS L + V G T Sbjct: 97 ADVVMSGVTITDDRKQSMDF--SDPYFEITQVVLVPKGKKISSSDDLKNMNKVGVVTGYT 154 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS-EH 214 + +++ N FE V I D+ D + + N + Sbjct: 155 GDFSVSKLLG--NDNPKIARFENVPLIIKELENGGLDSVVSDSAVIANYVKNNPTKGMDF 212 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 V LPD + A+ +GD +++ + + E Sbjct: 213 VTLPD-FTTEHYGIAVRKGDEATVKMLNDALKKVRESGEY 251 >gi|218768584|ref|YP_002343096.1| histidine-binding periplasmic protein [Neisseria meningitidis Z2491] gi|121052592|emb|CAM08932.1| histidine-binding periplasmic protein [Neisseria meningitidis Z2491] gi|319410821|emb|CBY91211.1| putative amino acid-binding lipoprotein (HBP) [Neisseria meningitidis WUE 2594] Length = 268 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 45/220 (20%), Positives = 79/220 (35%), Gaps = 10/220 (4%) Query: 37 KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96 + N F + + G+ +GFDVD A++ A KI++ F AL + Sbjct: 40 RVASNAEFAPFESLDSKGNVEGFDVDLMNAMAKA---GNFKIEFKHQPWDSLFPALNNGD 96 Query: 97 IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTT 155 D++ T R+ S+ + Q ++ K K ISS L + V G T Sbjct: 97 ADVVMSGVTITDDRKQSMDF--SDPYFEITQVVLVPKGKKISSSEDLKNMNKVGVVTGYT 154 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS-EH 214 + +++ N FE V I D+ D + + N + Sbjct: 155 GDFSVSKLLG--NDNPKIARFENVPLIIKELENGGLDSVVSDSAVIANYVKNNPTKGMDF 212 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 V LPD + A+ +GD +++ + + E Sbjct: 213 VTLPD-FTTEHYGIAVRKGDEATVKMLNDALKKVRESGEY 251 >gi|313893994|ref|ZP_07827560.1| putative histidine ABC transporter, periplasmic histidine-binding protein HisJ [Veillonella sp. oral taxon 158 str. F0412] gi|313441558|gb|EFR59984.1| putative histidine ABC transporter, periplasmic histidine-binding protein HisJ [Veillonella sp. oral taxon 158 str. F0412] Length = 270 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 44/271 (16%), Positives = 92/271 (33%), Gaps = 13/271 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K V + + ++ F + + + + + G++ G+ GFD+ Sbjct: 4 KKMMAVGLAAVSMMVFVTGCGGDAKKANTELPKKVVIGLDDSFPPMGFKDDKGEIVGFDI 63 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D + + ++++ ++ + L+SK+ID L + RE ++ + Sbjct: 64 DLAKEAAKRAG---MEVEFKAIDWSSKEAELKSKKIDALWNGLTVSPEREKNILF--SNV 118 Query: 122 TYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 D Q I+ + + I + L+G + VQ +T E L +K + Sbjct: 119 YMKDKQYIIVRNEDESIKGKADLAGKVVGVQQASTGEAALQKDESGKTVK-EIKSYADFV 177 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL-PDIISKSPLAPAIIQGDTEWYN 239 R DA D A L P ++ I+ A + DT + Sbjct: 178 SAFMDLGIGRVDAVIADGVI--ARYLMTKEPGKYKIVEGTDYGVDDFAVGFRKEDTALRD 235 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 ++ M ++ G K + T+ Sbjct: 236 KINGILAEM---KKDGTADKIAEKWLGSGTD 263 >gi|306812688|ref|ZP_07446881.1| arginine transporter subunit ; periplasmic-binding component of ABC superfamily protein [Escherichia coli NC101] gi|305853451|gb|EFM53890.1| arginine transporter subunit ; periplasmic-binding component of ABC superfamily protein [Escherichia coli NC101] Length = 243 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 50/269 (18%), Positives = 97/269 (36%), Gaps = 32/269 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ T ++ F + AN GFD Sbjct: 1 MKKVLIAALIAGFSLSATAAET-------------IRFATEASYPPFESIDANNQIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL I + + +L+ ++++ + D T RE + Sbjct: 48 VDLAQALCKEIDATCT---FSNQVFDSLIPSLKFRRVEAVMAGMDITPEREKQVLFT--- 101 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+D + ++ +SV QL G + VQ GTT + + D + + + ++ + Sbjct: 102 TPYYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFIMD----KHPEITTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D+ GD + + D P + + K L A+ QG+TE Sbjct: 158 NAKLDLQNGRIDSVFGDTAVVTEWLK--DNPKLAAVGDKVTDKDYFGTGLGIAVRQGNTE 215 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVS 265 ++ A+ ++ G + N+ Sbjct: 216 LQQKLN---TALEKVKKDGTYETIYNKWF 241 >gi|323339492|ref|ZP_08079771.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus ruminis ATCC 25644] gi|323093106|gb|EFZ35699.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus ruminis ATCC 25644] Length = 270 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 45/278 (16%), Positives = 88/278 (31%), Gaps = 16/278 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-------SILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M K + I L +N+ IK G + G++ V + N Sbjct: 1 MKKKSRIGICLFFALCLLGGCSNSKLRAEKVDNWARIKHHGMVVVGLDDSFVPMDFRQKN 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G G+DVD +A+ P + ++ + L + ID++ T R Sbjct: 61 GRLVGYDVDLAQAVFKKCGLKPD---FQTIDWSMKETELMNGTIDVIWNGYSKTSERMKK 117 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA-HNMKYH 172 + + Y ++ K+K + + + + +I VQ+G++ Y Sbjct: 118 VAFSNS---YLANDQVLVTKEKNVKNGADMKDKTIGVQSGSSGYDCYVGYPDMLKKYARK 174 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 I ++ + A R D + P + + K A I + Sbjct: 175 TIQYDTFNDAFLDLDAKRISGIVIDEVYASYVISHKSDPLSYHEVSIGYPKEEFAVGIRK 234 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 GD + ++ + I + N K+ N Sbjct: 235 GDKKLRLKINRALKELKRDG--TIKKINHKWFGKNFIN 270 >gi|320450574|ref|YP_004202670.1| amino acid ABC transporter binding protein [Thermus scotoductus SA-01] gi|320150743|gb|ADW22121.1| amino acid ABC transporter, binding protein [Thermus scotoductus SA-01] Length = 254 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 37/246 (15%), Positives = 82/246 (33%), Gaps = 13/246 (5%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 L IK+ G ++ G F GF++D A++ + P ++ Sbjct: 18 AQVRTLDQIKRSGEIRIGTEGAFSPFNYFDEKNQLVGFEIDLGNAIAQKLGLKPV---WI 74 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 + L + D + + T R ++ ++ G I+ KK G + Sbjct: 75 TQAFDSLLIQLNQGRFDFVIASHGITEERAKAVDFTN---PHYCTGGIIVSKKGGPKTAK 131 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 +L G + VQ GTT +++ + + R DA+ D + Sbjct: 132 ELQGKVVGVQIGTTYMEAAQKIPGIKQ----VRTYQKDPDALQDLLSGRLDAWITDR-FV 186 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 + + + L +++ + +A A+ +G+ ++ ++ K Sbjct: 187 AKEAIKERKLENTLQLGELVFQERVAMAVAKGNKSVLQALNQALADLMKDGTYAQISK-- 244 Query: 262 NQVSKD 267 +D Sbjct: 245 KWFGED 250 >gi|331672402|ref|ZP_08373193.1| arginine-binding periplasmic protein 1 [Escherichia coli TA280] gi|331070597|gb|EGI41961.1| arginine-binding periplasmic protein 1 [Escherichia coli TA280] Length = 243 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 49/269 (18%), Positives = 97/269 (36%), Gaps = 32/269 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ T ++ F + AN GFD Sbjct: 1 MKKVLIAALIAGFSLSATAAET-------------IRFATEASYPPFESIDANNQIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL I + + +L+ ++++ + D T RE + Sbjct: 48 VDLAQALCKEIDATCT---FSNQAFDSLIPSLKFRRVEAVMAGMDITPEREKQVLFT--- 101 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+D + ++ +SV QL G + VQ GTT + + D + + + ++ + Sbjct: 102 TPYYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFIMD----KHPEITTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D+ GD + + D P + + K L A+ QG++E Sbjct: 158 NAKLDLQNGRIDSVFGDTAVVTEWLK--DNPKLAAVGDKVTDKDYFGTGLGIAVRQGNSE 215 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVS 265 ++ A+ ++ G + N+ Sbjct: 216 LQQKLN---TALEKVKKDGTYETIYNKWF 241 >gi|311068999|ref|YP_003973922.1| high affinity arginine ABC transporter binding lipoprotein [Bacillus atrophaeus 1942] gi|310869516|gb|ADP32991.1| high affinity arginine ABC transporter binding lipoprotein [Bacillus atrophaeus 1942] Length = 255 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 52/259 (20%), Positives = 99/259 (38%), Gaps = 11/259 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + I ++ +++S D KK+ + G + F + + GFD Sbjct: 1 MKKWLLLLVAACITFALSACGSSSSGSADGKKK--IIMGTSADYKPFEYKDGD-NIVGFD 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL+ + I+ ++ AL+SKQID++ T R+ + Sbjct: 58 VDLAKALAKKAGYE---IEVQDMDFNSLITALKSKQIDMVLSGMTPTPERKKQVDF--SD 112 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 I Y + K GI S+S L G ++ VQ G+ E + + + R+ Sbjct: 113 IYYTAHHMIVSKKDSGIDSLSDLKGKTVGVQLGSIQEEKGKELSP--DYDFKTEDRNRIS 170 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 ++ ++ R DA + +N+ I ++ A A + D++ + Sbjct: 171 DLVQEIKSGRFDAAIIEDMVAEGYFNSNEDLQGFTIPDAKAEEAGSAIAFRK-DSDLTDK 229 Query: 241 VSWTHYAMVTAEELGITQK 259 + M EL +K Sbjct: 230 FNKALKEMKDNGELDKLKK 248 >gi|15900055|ref|NP_344659.1| amino acid ABC transporter, periplasmic amino acid-binding protein, putative [Streptococcus pneumoniae TIGR4] gi|111657059|ref|ZP_01407854.1| hypothetical protein SpneT_02001712 [Streptococcus pneumoniae TIGR4] gi|14971580|gb|AAK74299.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Streptococcus pneumoniae TIGR4] Length = 268 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 45/274 (16%), Positives = 90/274 (32%), Gaps = 18/274 (6%) Query: 1 MYKDFFVSI-LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56 M K L ++ L F + ++ + IK +G L +N F V Sbjct: 4 MKKVLMTMFGLVMLPLLFACSNNQSAGIEAIKSKGKLVVALNPDFAPFEYQKVVDGKNQI 63 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G D++ +A+++ + + ++ P++ ++QS + D+ T R S Sbjct: 64 VGSDIELAKAIATKLGVE---LELSPMSFDNVLASVQSGKADLAISGVSKTDER--SKVF 118 Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F Y I+ K SV+ L+ + Q G+ E D + Sbjct: 119 DFSIPYYTAKNKLIVKKSDLTTYQSVNDLAQKKVGAQKGSIQETMAKDLL----QNSSLV 174 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + ++ + DA + N + + + A A+ + Sbjct: 175 SLPKNGNLITDLKSGQVDAVIFEEPVSKGFVENNPDLAIADLNFEKEQDDSYAVAMKKDS 234 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 + V T + + EL K I K + Sbjct: 235 KKLKEAVDKTIQKLKESGELD---KLIEDAFKAS 265 >gi|190895059|ref|YP_001985352.1| putative amino acid ABC transporter substrate-binding protein [Rhizobium etli CIAT 652] gi|190700720|gb|ACE94802.1| probable amino acid ABC transporter, substrate-binding protein [Rhizobium etli CIAT 652] gi|327194401|gb|EGE61261.1| putative amino acid ABC transporter substrate-binding protein [Rhizobium etli CNPAF512] Length = 275 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 54/278 (19%), Positives = 92/278 (33%), Gaps = 16/278 (5%) Query: 1 MYK-DFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K F ++ + LF + S +A L +K G LK G T F + A G+ G Sbjct: 1 MRKNSFLKGLVGVAFLFGATISAHAADTLAAVKAAGTLKVGTETAFAPFDFIDA-GEHVG 59 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 +VD + + KI+++ L F AL++ + D+++ T R Sbjct: 60 LNVDLFNEIGKELG---VKIEWVTLPWDGVFPALEAGKFDVVAGPATITKKRMERYRFT- 115 Query: 119 RPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + I+ K K I+ ++G I V T L ++ + K + Sbjct: 116 --PPLAEATIAILKKAGDKTINKPEDIAGKKIGVGKATAQLDQLKEFSETLPTKVDVREY 173 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA-PAIIQGDT 235 E A A R + + A + V+LP KS + D Sbjct: 174 PAFTESYADLAAGRIAGVANSLPNI-AFVAKQREGTFEVVLPPFGKKSYFGFIGLKDADH 232 Query: 236 E-WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272 + + + + QK PD Sbjct: 233 APLMDAIDAAMLKIKADGRMATLQK--KWFGASFDTPD 268 >gi|51243941|ref|YP_063825.1| substrate-binding periplasmic protein (FliY) [Desulfotalea psychrophila LSv54] gi|50874978|emb|CAG34818.1| similar to substrate-binding periplasmic protein (FliY) [Desulfotalea psychrophila LSv54] Length = 275 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 56/255 (21%), Positives = 103/255 (40%), Gaps = 28/255 (10%) Query: 5 FFVSILCLIILFFTSFS------TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 F +++LC+++L S T +S++ I+K+ L+ G++ +A G+ G Sbjct: 9 FTLALLCIMMLGTVQASQIQGDITRSSVISKIQKKRVLRVGMDV-FQPWAMKNKKGELVG 67 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 F++D R L+ + +++++P AL + + D+L T R +L + F Sbjct: 68 FEIDVARRLAKDMG---VRVEFVPTPWSGIVPALLTGKFDVLIGGIGITSKR--ALKVNF 122 Query: 119 RPITYFDGQGFIMHKK--KGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPI 174 + G G + H+K KG SS+ + I V+ GT+ Y Sbjct: 123 TIPYDYSGMGIVAHRKLAKGFSSIEDFNRPEIEIAVKLGTSAVTATKKYMPRA----KLR 178 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +F+ + R + A G L + I D S+ P+A A+ +GD Sbjct: 179 MFDTEIQAYQELRNGKVAAVVGSAPRPVYEALDYQDILFNPIA-DTFSQEPIAFALRKGD 237 Query: 235 TE-------WYNIVS 242 + W IV Sbjct: 238 PDALAFFNAWIRIVD 252 >gi|33601619|ref|NP_889179.1| putative glutamine-binding periplasmic protein precursor [Bordetella bronchiseptica RB50] gi|33576056|emb|CAE33135.1| putative glutamine-binding periplasmic protein precursor [Bordetella bronchiseptica RB50] Length = 247 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 45/236 (19%), Positives = 90/236 (38%), Gaps = 16/236 (6%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 ++ + V +G GFD++ AL+ A+ KI+++ ++ K ALQ+ Sbjct: 28 TIRAVTDATFPPMEFV-KDGKRTGFDIELVEALAQAMGK---KIEWIDIDFKGLIPALQA 83 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 + DI T R+ + Y G + K + S+ L G + VQ GT Sbjct: 84 GRADIAVSAIYITAERQKVVDF--TDPYYAGGLVVLTKKDGPVKSLKDLEGRKVSVQVGT 141 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 + L ++F K + E+ +E+ + R DA A KL + Sbjct: 142 KSVNYLKEHFP----KVQRVEVEKNQEMFNLVQIGRADAAVTGKP---AAKLFAQSTQDL 194 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 +L + I+ A+ + + ++ A+ + G ++ +N+ + Sbjct: 195 AVLSEQITTEEYGIAVPKSKSGLTRELN---EALKKLKADGTYERIVNKWFEAQAK 247 >gi|78358110|ref|YP_389559.1| extracellular solute-binding protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78220515|gb|ABB39864.1| amino acid ABC transporter substrate-binding protein, PAAT family [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 273 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 50/228 (21%), Positives = 88/228 (38%), Gaps = 16/228 (7%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 T S + RG LK G +T V +A G++ GF+VD R L++ + ++Q++ Sbjct: 30 TRQSTIARAVDRGVLKVGFST-FVPWAMKDKQGEFIGFEVDVARRLAADLG---LEVQFV 85 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GISS 139 P AL + + D++ R IS+ + G + HK K G S Sbjct: 86 PTKWSGIIPALLTGKFDVIIGGMSVKPDRNISVNFTI--PYDYAGMAVMAHKGKAAGFSR 143 Query: 140 VSQLSGASICVQA--GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + + V A GTT YF A +F+ + R A Sbjct: 144 LEDFDREDVVVVARIGTTAASVAKKYFPAAQ----VRLFDDEAQAVQELLNGRAHAMVS- 198 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI-VSWT 244 + L A + + + + ++ P+ A+ +GD + N+ +W Sbjct: 199 SAPLPAFTVLEHPDTLFMPVEGTFTREPVGFAVRKGDIDTLNVFNNWI 246 >gi|218551435|ref|YP_002385227.1| arginine-binding periplasmic protein 2 [Escherichia fergusonii ATCC 35469] gi|218358977|emb|CAQ91637.1| arginine-binding periplasmic protein 2 precursor [Escherichia fergusonii ATCC 35469] Length = 271 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 47/265 (17%), Positives = 98/265 (36%), Gaps = 30/265 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + V +L L F + + N L G + + V A+ GFD Sbjct: 26 MKQKLLVMLLA--GLSFQATAANTKTL---------HFGTSATYAPYEFVDADNQIVGFD 74 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +A+ + ++ Q+ + L+ K+ D + D T RE + + Sbjct: 75 IDVAKAVCKEM---QAECQFTNQSFDSLIPGLRFKKFDAVIAGMDMTAKREQQVSFSQ-- 129 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y ++ +K +S ++L G I ++ GTT + L D + + ++ Sbjct: 130 PYYEGLSAVVVTRKGAYNSFAELKGKKIGLENGTTHQRYLQD----KQKEITAVAYDSYL 185 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP------LAPAIIQGD 234 +++R D GD + A+ ++ I+ + +K P L A+ +G+ Sbjct: 186 NAFTDLKSNRLDGVFGD---VAAIGKWLKNNPDYAIMDER-AKDPEYYGKGLGIAVRKGN 241 Query: 235 TEWYNIVSWTHYAMVTAEELGITQK 259 ++ + + E Q+ Sbjct: 242 DALLAEINAALDKVKASPEYAQMQE 266 >gi|15889178|ref|NP_354859.1| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|15156996|gb|AAK87644.1| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 257 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 46/260 (17%), Positives = 90/260 (34%), Gaps = 21/260 (8%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 ++ + + + S + A + G F ++A+G GFD+D + Sbjct: 7 LLAAVSIAAISLLSGAALAQ--------DKIVIGTEGAYPPFNNLEADGTLTGFDIDIAK 58 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 AL + + + ++ + ALQ+K+ D + + T R + + + Y Sbjct: 59 ALCEQMKAECT---FVTNDWDGIIPALQAKKFDAIIASMSITPERLQKVDFSKK--YYNT 113 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 + K I S+ L G S+ Q TT +F ++K +P +E Sbjct: 114 PPAIAVPKDSPIKSIDDLKGKSLGAQGSTTHSNYAEKHFPDADVKMYP----TADEYKLD 169 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTEWYNIV 241 R DA DI L T+ ++ P + A+ +GDT + Sbjct: 170 IANGRIDAVIDDIVVLSEWLKTDAGKCCKILTPLKVDPEINGNGAGIAVRKGDTALADKF 229 Query: 242 SWTHYAMVTAEELGITQKNI 261 + + + + K Sbjct: 230 TAAIAGIRASGKYQEINKKY 249 >gi|121635265|ref|YP_975510.1| histidine-binding periplasmic protein [Neisseria meningitidis FAM18] gi|120866971|emb|CAM10733.1| histidine-binding periplasmic protein [Neisseria meningitidis FAM18] gi|308389741|gb|ADO32061.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria meningitidis alpha710] gi|325130652|gb|EGC53393.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria meningitidis OX99.30304] gi|325132704|gb|EGC55387.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria meningitidis M6190] gi|325136726|gb|EGC59326.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria meningitidis M0579] gi|325138590|gb|EGC61149.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria meningitidis ES14902] gi|325144831|gb|EGC67119.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria meningitidis M01-240013] gi|325201717|gb|ADY97171.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria meningitidis M01-240149] gi|325208539|gb|ADZ03991.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria meningitidis NZ-05/33] Length = 268 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 45/220 (20%), Positives = 79/220 (35%), Gaps = 10/220 (4%) Query: 37 KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96 + N F + + G+ +GFDVD A++ A KI++ F AL + Sbjct: 40 RVASNAEFAPFESLDSKGNVEGFDVDLMNAMAKA---GNFKIEFKHQPWDSLFPALNNGD 96 Query: 97 IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTT 155 D++ T R+ S+ + Q ++ K K ISS L + V G T Sbjct: 97 ADVVMSGVTITDDRKQSMDF--SDPYFEITQVVLVPKGKKISSSDDLKNMNKVGVVTGYT 154 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS-EH 214 + +++ N FE V I D+ D + + N + Sbjct: 155 GDFSVSKLLG--NDNPKIARFENVPLIIKELENGGLDSVVSDSAVIANYVKNNPTKGMDF 212 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 V LPD + A+ +GD +++ + + E Sbjct: 213 VTLPD-FTTEHYGIAVRKGDEATVKMLNDALEKVRESGEY 251 >gi|149007336|ref|ZP_01830994.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP18-BS74] gi|149011634|ref|ZP_01832830.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP19-BS75] gi|168493297|ref|ZP_02717440.1| ABC transporter substrate-binding protein - glutamine-binding protein [Streptococcus pneumoniae CDC3059-06] gi|307127037|ref|YP_003879068.1| glutamine ABC transporter glutamine-binding protein [Streptococcus pneumoniae 670-6B] gi|147761140|gb|EDK68108.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP18-BS74] gi|147764065|gb|EDK70997.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP19-BS75] gi|183576732|gb|EDT97260.1| ABC transporter substrate-binding protein - glutamine-binding protein [Streptococcus pneumoniae CDC3059-06] gi|306484099|gb|ADM90968.1| ABC transporter substrate-binding protein - glutamine-binding protein [Streptococcus pneumoniae 670-6B] gi|332074716|gb|EGI85190.1| bacterial extracellular solute-binding s, 3 family protein [Streptococcus pneumoniae GA17545] Length = 271 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 44/276 (15%), Positives = 93/276 (33%), Gaps = 23/276 (8%) Query: 1 MYKDFFVSILCLIILFF------TSFSTNASILGDIKKRGFLKCGINTGLVGF---AEVK 51 M ++ +LC + F + + + S + IK++G L + F + V Sbjct: 1 MKSKKWIFVLCNFLASFFLVACQSGSNGSQSAVEAIKQKGKLVVATSPDYAPFEFQSLVD 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G D+D +A++ + K++ ++ +LQ+ + D+ T R Sbjct: 61 GKNQVVGADIDMAQAIADELG---VKLEISSMSFDNVLTSLQTGKADLAVAGISATDER- 116 Query: 112 ISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 F Y + F++ K ++ L A+I Q GT E + + Sbjct: 117 -KEVFDFSIPYYENKISFLVRKADVEKYKDLTSLESANIAAQKGTVPESMVKEQLPKAQ- 174 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + E +A + DA D + N + + + A A Sbjct: 175 ---LTSLTNMGEAVNELQAGKVDAVHMDEPVALSYAAKNAGLAVATVSLKMKDGDANAVA 231 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 + + + +V ++ GI Q + + + Sbjct: 232 LRKNSDDLKEVVDKVIQ---KLKDEGIYQSYLEKAA 264 >gi|33595379|ref|NP_883022.1| solute-binding periplasmic protein [Bordetella parapertussis 12822] gi|33599678|ref|NP_887238.1| solute-binding periplasmic protein [Bordetella bronchiseptica RB50] gi|33565457|emb|CAE40090.1| probable solute-binding periplasmic protein [Bordetella parapertussis] gi|33567275|emb|CAE31188.1| probable solute-binding periplasmic protein [Bordetella bronchiseptica RB50] Length = 276 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 45/276 (16%), Positives = 93/276 (33%), Gaps = 15/276 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L L + + + ++L + + ++ + L + + GF+ Sbjct: 11 MLKWLMAVPLALGL----AHAHAETVLEKARAKNEIRIATSDSLKPWGYMDDTNKPIGFN 66 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D R + + K+ ++ + K L + + D++ T R S + P Sbjct: 67 LDVSREMGKRMGF--GKVTFVTDSYKNFISGLNADRYDMVVAILTPTEERRKSADFSN-P 123 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 F+ I S+ L+G + V AGTT E + + H V++ Sbjct: 124 YMVVSKNIFVRDDNTSIRSLEDLAGKRLGVAAGTTDEA----WARQHVKDAQIRVYDNFF 179 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 R DA D + + + I +S+ A A +G + I Sbjct: 180 LALQDLAIGRVDARITDR--VTGMTAAKEGRFPVKIAGPDLSQDIGAIAYKKGQDDLAAI 237 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRF 276 V+ MV L + ++ ++++ Sbjct: 238 VNKVIQEMVDDGSLNEISR--KWLAGIEMGEELKKL 271 >gi|308186180|ref|YP_003930311.1| glutamine-binding periplasmic protein precursor glnH [Pantoea vagans C9-1] gi|308056690|gb|ADO08862.1| Glutamine-binding periplasmic protein precursor glnH [Pantoea vagans C9-1] Length = 248 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 50/268 (18%), Positives = 92/268 (34%), Gaps = 24/268 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M VS+ L + F S + L +T V F + + + GFD Sbjct: 1 MKSLLKVSVAALALAFSLSSTAAE---------KKLVVATDTAFVPFEFKQGD-KYVGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A++ + D P++ ALQ++ +D+ T R+ ++ + Sbjct: 51 VDLWDAIAKELKLD---YTLKPMDFSGIIPALQTRNVDLALAGITITEERKKAIEFSDG- 106 Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G ++ + I +S L+G + V++GT + +Y KA+ F + Sbjct: 107 -YYKSGLQVMVRNNENNIKGISDLNGKVVAVKSGTGSV----EYAKANIKSKDLRQFPNI 161 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + +R DA D + T + + D I A +G + Sbjct: 162 DSAYMELGTNRADAVLHDTPNILYFIHTAGK-GRFKAVGDSIEAQQYGIAFPKGSDDLRE 220 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKD 267 V+ T +E G + Sbjct: 221 KVNGALK---TLKENGTYNTLYKKWFGT 245 >gi|94986085|ref|YP_605449.1| extracellular solute-binding protein [Deinococcus geothermalis DSM 11300] gi|94556366|gb|ABF46280.1| amino acid ABC transporter substrate-binding protein, PAAT family [Deinococcus geothermalis DSM 11300] Length = 253 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 46/241 (19%), Positives = 86/241 (35%), Gaps = 18/241 (7%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 G LK + F G GFDVD +A+++ + P +++ LQ Sbjct: 28 GVLKIAMEGTYPPFTYKDEQGQLSGFDVDIAKAVAAKLGLRP---EFVLTEWSGILGGLQ 84 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI--SSVSQLSGASICVQ 151 + + D++ T R+ ++G + + I+ K +++ L G + V Sbjct: 85 ANKYDVIVNQVGITPERQKTIGFSR--PYAYSSPQIIVRKGSSFNPKTLADLKGKRVGVG 142 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 G+ E L + + + E A A R DA D + L N+ P Sbjct: 143 LGSNFEQQLRQA-----GGINVVTYPGAPEYLADLAAGRLDAAYNDRLLVGYLITKNNLP 197 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK-NINQVSKDTTN 270 I P+ A + +T N ++ A++ + G K + +D + Sbjct: 198 --IKGAGVIGQPEPVGIAFKKTNTALGNAIN---RALLQIQADGTYAKISRKWFGEDVSK 252 Query: 271 P 271 P Sbjct: 253 P 253 >gi|188589766|ref|YP_001920425.1| amino acid ABC transporter, substrate-binding protein [Clostridium botulinum E3 str. Alaska E43] gi|188500047|gb|ACD53183.1| amino acid ABC transporter, substrate-binding protein [Clostridium botulinum E3 str. Alaska E43] Length = 268 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 45/271 (16%), Positives = 95/271 (35%), Gaps = 13/271 (4%) Query: 1 MYKDF--FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K F + + C+ + + ++ + + G++ V +G+ G Sbjct: 2 MNKLFKKLLIVSCVATIGVNLVACKSNKQESASSKNEIIIGMDDTFVPMGFKDGSGETVG 61 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD +A+ + K+++ ++ + L + ID++ T R+ ++ Sbjct: 62 FDVDLAKAVGEKL---NKKVKFQSIDWSMKESELNNGNIDLIWNGYSITDERKENVEF-- 116 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD--YFKAHNMKYHPIVF 176 + + Q I I+S + L A + Q ++ + + + + F Sbjct: 117 SKVYLNNRQVIITLADSKINSKNDLINAKVGAQNQSSAVDAIKADGDMMSKFDGGNVVTF 176 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E + A R DA D L ++ IL D A I +GDT Sbjct: 177 ETNNDALMDLEAGRIDAVVADE-ILAKYYTNERGKEKYKILNDDFGAEDYAVGIKKGDTS 235 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 + + +++ E G K + + Sbjct: 236 FVQEFNNALNSVI---EDGTGAKISEKWFGE 263 >gi|213852498|ref|ZP_03382030.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 217 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 48/239 (20%), Positives = 85/239 (35%), Gaps = 25/239 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ T ++ F + AN GFD Sbjct: 1 MKKVLIAALIAGFSLSATAAQT-------------IRFATEASYPPFESMDANNKIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL I + + +L+ ++ D + D T RE + Sbjct: 48 VDLANALCKEIDASCT---FTNQAFDSLIPSLKFRRFDAVMAGMDITPEREKQVLFT--- 101 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+D + ++ +SV QL G + VQ GTT + + D + + + ++ + Sbjct: 102 TPYYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFIMD----KHPEITTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEW 237 + R DA GD + + N + P + + L A+ QG+TE Sbjct: 158 NAKLDLQNGRIDAVFGDTAVVTEWLKANPKLAPVGDKVTDKDYFGTGLGIAVRQGNTEL 216 >gi|126444587|ref|YP_001064263.1| glutamine ABC transporter periplasmic protein [Burkholderia pseudomallei 668] gi|126224078|gb|ABN87583.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia pseudomallei 668] Length = 250 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 46/267 (17%), Positives = 90/267 (33%), Gaps = 25/267 (9%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + F +I+ L ++ + +A L G +T + F + + + GFD+ Sbjct: 3 RRSFIKTIVALALVGASVAGAHA---------KELVVGTDTSFMPFEFKQGD-KYVGFDL 52 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D ++ + P++ ALQ++ ID+ R ++ Sbjct: 53 DLWAEIAK---GAGWTYKIQPMDFAGLIPALQTQNIDVALSGMTIKEERRKAIDF--SDP 107 Query: 122 TYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G ++ I S+ L+G I + GT T D+ KAH F ++ Sbjct: 108 YYDSGLAAMVQANNTTIKSIDDLNGKVIAAKTGTATI----DWIKAHLKPKEIRQFPNID 163 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A A R DA D + + N+ + +S +G + Sbjct: 164 QAYLALEAGRVDAAMHDTPNVL-FFVNNEGKGRVKVAGAPVSGDKYGIGFPKGSP----L 218 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKD 267 V+ + + + G K + Sbjct: 219 VAKVNAELARMKADGRYAKIYKKWFGS 245 >gi|167567071|ref|ZP_02359987.1| glutamine ABC transporter periplasmic protein [Burkholderia oklahomensis EO147] gi|167574148|ref|ZP_02367022.1| glutamine ABC transporter periplasmic protein [Burkholderia oklahomensis C6786] Length = 250 Score = 130 bits (327), Expect = 4e-28, Method: Composition-based stats. Identities = 46/268 (17%), Positives = 91/268 (33%), Gaps = 24/268 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + F+ + + L S ++ + L G +T + F + + + GFD Sbjct: 1 MGRRSFIKTVVAVALVGASLASA--------QAKELVVGTDTSFMPFEFKQGD-KYVGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D ++ + P++ ALQ++ ID+ R+ ++ Sbjct: 52 LDLWAEIAKDAG---WTYKIQPMDFAGLIPALQTQNIDVALSGMTIKEERKKAIDF--SD 106 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G ++ I S+ L+G I + GT T D+ KAH F + Sbjct: 107 PYYDSGLAAMVQTNNATIKSIDDLNGKVIAAKTGTATI----DWIKAHLKPKEIRQFPNI 162 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 ++ A A R DA D + + N+ + +S +G Sbjct: 163 DQAYLALEAGRVDAAMHDTPNVL-FFVNNEGKGRVKVAGTPVSGDKYGIGFPKGSP---- 217 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKD 267 +V+ + + + G K + Sbjct: 218 LVAKVNAELAKMKADGRYAKIYKKWFGS 245 >gi|313125641|ref|YP_004035911.1| amino acid ABC transporter substrate-binding protein, paat family [Halogeometricum borinquense DSM 11551] gi|312292006|gb|ADQ66466.1| amino acid ABC transporter substrate-binding protein, PAAT family [Halogeometricum borinquense DSM 11551] Length = 300 Score = 130 bits (327), Expect = 4e-28, Method: Composition-based stats. Identities = 39/233 (16%), Positives = 75/233 (32%), Gaps = 22/233 (9%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 + G + F +G+ KGFDV+ +A+ + ++ + +L S Sbjct: 63 KVVIGSDIPYRPFEYETTSGELKGFDVEIAQAVFEEELG--VEYEFKKTSFDSIIPSLNS 120 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 + I+ R+ + + + Q I+ K ISS L GA+I VQ GT Sbjct: 121 GRFRIIMSAMTINEKRKEKVDFSE--PYFTAYQTVIIKKDSSISSKEDLKGATIGVQKGT 178 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T + + ++++ A + DA D + D+ + Sbjct: 179 TGASAAEELKTEFDGDLTLKKYDQIPSAFQALINGQIDAIVNDNTVNSEFA---DKRDDV 235 Query: 215 VILPD---------------IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 V L ++ + D E+ V+ A+ Sbjct: 236 VFLEGEGAAAAEGENAPPYLTLTVENYGIGFRKADDEFRKKVNEALAAVKENG 288 >gi|227824560|ref|ZP_03989392.1| periplasmic glutamine-binding protein [Acidaminococcus sp. D21] gi|226905059|gb|EEH90977.1| periplasmic glutamine-binding protein [Acidaminococcus sp. D21] Length = 265 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 43/272 (15%), Positives = 77/272 (28%), Gaps = 17/272 (6%) Query: 1 MYKDF----FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-D 55 M K ++ L L + + ++ L G F Sbjct: 4 MKKSLKMMCLLAALILGVAGCGGNAAKDDKKAAAPQKKELVVGTAPSFAPFEFPSEEADK 63 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFD++ A+ + + K+ + A+ + ID++ T R+ + Sbjct: 64 PTGFDMELIEAIGKKMGYE--KVTIKGMGFDALIPAMNAGNIDVIISGMSITDARKKQVL 121 Query: 116 LAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 Y G I+ K I S L G I VQ GTT A Sbjct: 122 F--TDPYYESGLMVIVKKDNNEIKSFDDLKGKRIGVQLGTTGAQEAEKIEGA-----KVT 174 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 F+ + + DA D+ L L S + A + Sbjct: 175 NFDTSDLACIELKNGNVDAVISDLPVLQYF-LKQKGSSYAKAVGTPKKGDFYGIAAPKDK 233 Query: 235 TEWYNIVSWTHYAMVTAEEL-GITQKNINQVS 265 + + ++ + + E I K ++ Sbjct: 234 KDLVDGMNKALKELKDSGEYKKIYTKWFGEMK 265 >gi|91781143|ref|YP_556350.1| polar amino acid ABC transporter periplasmic ligand-binding protein [Burkholderia xenovorans LB400] gi|91693803|gb|ABE37000.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia xenovorans LB400] Length = 305 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 44/231 (19%), Positives = 81/231 (35%), Gaps = 13/231 (5%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 L I R + G+ G F + +G +VD + + + +Q + + Sbjct: 56 PTLEKIASRHQIAVGVLIGGSPFGSLDPQTQQPRGINVDLANDIGKRLGVN---VQLVSV 112 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF-DGQGFIMHKKKGISSVSQ 142 R LQ ++DIL N ++ R L P Y+ G I K GI+ Sbjct: 113 QPSTRVQFLQQGKVDILIANMEYNPQR--GEILDHVPTPYYRVGGTAITPKTSGITKWED 170 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD-ISAL 201 L G +C+ G++ + + + A P F + A R C A D L Sbjct: 171 LRGKPVCISQGSSYIRPIVEKYGA-----VPRAFPGASQSLLALRGGSCVAAVHDAAPLL 225 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 Y L+ + ++ + + +P + QG+ + + + Sbjct: 226 YPLQQHDPEWRDYRTIQPELVPAPSVIWVRQGEKDTAAKLDAIVRDWHRSG 276 >gi|320353114|ref|YP_004194453.1| PAAT family amino acid ABC transporter substrate-binding protein [Desulfobulbus propionicus DSM 2032] gi|320121616|gb|ADW17162.1| amino acid ABC transporter substrate-binding protein, PAAT family [Desulfobulbus propionicus DSM 2032] Length = 248 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 48/263 (18%), Positives = 95/263 (36%), Gaps = 19/263 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M ++ + + C ++LF S S +A+ L GI+ FA + G GFD Sbjct: 1 MLRNALLILACALMLF--SGSASAAT--------KLVNGIDANFPPFAFIDKTGAPSGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ ++ + + + P+ +L +K+IDI++ T R + Sbjct: 51 VEAMNWIAKDMG---VAVSHQPIEWDGIITSLLTKKIDIIASGMSITPDRAKQVNFTL-- 105 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASI-CVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Q + K ++ + LSG I VQ GT+ L + A + + Sbjct: 106 PYWVIKQVMVTKKGSPLTIDAILSGKKILGVQQGTSEAKWLKEQAAAKGWNFELRYYNSS 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 R DA D + + V+ + + A+ +GD E + Sbjct: 166 PLAVEDLLNGRIDAAAMDDAPAKDAAAKKEVQ---VLGTFGMEQEEFGYAVRKGDQELLD 222 Query: 240 IVSWTHYAMVTAEELGITQKNIN 262 V+ + ++ + + +K Sbjct: 223 KVNASLKKLMASPDWEALKKKYE 245 >gi|15800618|ref|NP_286632.1| arginine 3rd transport system periplasmic binding protein [Escherichia coli O157:H7 EDL933] gi|15830200|ref|NP_308973.1| arginine 3rd transport system periplasmic binding protein [Escherichia coli O157:H7 str. Sakai] gi|168750052|ref|ZP_02775074.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC4113] gi|168756662|ref|ZP_02781669.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC4401] gi|168763282|ref|ZP_02788289.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC4501] gi|168767378|ref|ZP_02792385.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC4486] gi|168776409|ref|ZP_02801416.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC4196] gi|168779420|ref|ZP_02804427.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC4076] gi|168787089|ref|ZP_02812096.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC869] gi|168799850|ref|ZP_02824857.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC508] gi|195936912|ref|ZP_03082294.1| arginine 3rd transport system periplasmic binding protein [Escherichia coli O157:H7 str. EC4024] gi|208808622|ref|ZP_03250959.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC4206] gi|208816255|ref|ZP_03257434.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC4045] gi|208822439|ref|ZP_03262758.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC4042] gi|209397117|ref|YP_002269536.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC4115] gi|217324500|ref|ZP_03440584.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. TW14588] gi|254792062|ref|YP_003076899.1| arginine ABC transporter periplasmic-binding protein [Escherichia coli O157:H7 str. TW14359] gi|261225517|ref|ZP_05939798.1| arginine transporter subunit; periplasmic-binding component of ABC superfamily protein [Escherichia coli O157:H7 str. FRIK2000] gi|261258514|ref|ZP_05951047.1| arginine transporter subunit; periplasmic-binding component of ABC superfamily protein [Escherichia coli O157:H7 str. FRIK966] gi|291281865|ref|YP_003498683.1| Arginine ABC transporter periplasmic arginine-binding protein ArtI [Escherichia coli O55:H7 str. CB9615] gi|12513884|gb|AAG55242.1|AE005267_7 arginine 3rd transport system periplasmic binding protein [Escherichia coli O157:H7 str. EDL933] gi|13360405|dbj|BAB34369.1| arginine 3rd transport system periplasmic binding protein [Escherichia coli O157:H7 str. Sakai] gi|187768202|gb|EDU32046.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC4196] gi|188015722|gb|EDU53844.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC4113] gi|189002776|gb|EDU71762.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC4076] gi|189356239|gb|EDU74658.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC4401] gi|189363375|gb|EDU81794.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC4486] gi|189366498|gb|EDU84914.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC4501] gi|189373113|gb|EDU91529.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC869] gi|189377781|gb|EDU96197.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC508] gi|208728423|gb|EDZ78024.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC4206] gi|208732903|gb|EDZ81591.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC4045] gi|208737924|gb|EDZ85607.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC4042] gi|209158517|gb|ACI35950.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC4115] gi|209775298|gb|ACI85961.1| arginine 3rd transport system periplasmic binding protein [Escherichia coli] gi|209775300|gb|ACI85962.1| arginine 3rd transport system periplasmic binding protein [Escherichia coli] gi|209775302|gb|ACI85963.1| arginine 3rd transport system periplasmic binding protein [Escherichia coli] gi|209775304|gb|ACI85964.1| arginine 3rd transport system periplasmic binding protein [Escherichia coli] gi|209775306|gb|ACI85965.1| arginine 3rd transport system periplasmic binding protein [Escherichia coli] gi|217320721|gb|EEC29145.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. TW14588] gi|254591462|gb|ACT70823.1| arginine transporter subunit; periplasmic-binding component of ABC superfamily [Escherichia coli O157:H7 str. TW14359] gi|290761738|gb|ADD55699.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O55:H7 str. CB9615] gi|320192652|gb|EFW67293.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC1212] gi|320637733|gb|EFX07525.1| putative ABC transporter arginine-biding protein [Escherichia coli O157:H7 str. G5101] gi|320642856|gb|EFX12057.1| putative ABC transporter arginine-biding protein [Escherichia coli O157:H- str. 493-89] gi|320648313|gb|EFX16968.1| putative ABC transporter arginine-biding protein [Escherichia coli O157:H- str. H 2687] gi|320654151|gb|EFX22219.1| putative ABC transporter arginine-biding protein [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320659775|gb|EFX27331.1| putative ABC transporter arginine-biding protein [Escherichia coli O55:H7 str. USDA 5905] gi|320664245|gb|EFX31396.1| putative ABC transporter arginine-biding protein [Escherichia coli O157:H7 str. LSU-61] gi|326338243|gb|EGD62072.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. 1125] gi|326346220|gb|EGD69958.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. 1044] Length = 243 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 50/269 (18%), Positives = 97/269 (36%), Gaps = 32/269 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ T ++ F + AN GFD Sbjct: 1 MKKVLIAALIAGFSLSATAAET-------------IRFATEASYPPFESIDANNQIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL I + + +L+ ++++ + D T RE + Sbjct: 48 VDLAQALCKEIDATCT---FSNQAFDSLIPSLKFRRVEAVMAGMDITAEREKQVLFT--- 101 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+D + ++ +SV QL G + VQ GTT + + D + + + ++ + Sbjct: 102 TPYYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFIMD----KHPEITTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D+ GD + + D P + + K L A+ QG+TE Sbjct: 158 NAKLDLQNGRIDSVFGDTAVVTEWLK--DNPKLAAVGDKVTDKDYFGTGLGIAVRQGNTE 215 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVS 265 ++ A+ ++ G + N+ Sbjct: 216 LQQKLN---TALEKVKKDGTYETIYNKWF 241 >gi|251778453|ref|ZP_04821373.1| amino acid ABC transporter, substrate-binding protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243082768|gb|EES48658.1| amino acid ABC transporter, substrate-binding protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 267 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 45/271 (16%), Positives = 95/271 (35%), Gaps = 13/271 (4%) Query: 1 MYKDF--FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K F + + C+ + + ++ + + G++ V +G+ G Sbjct: 1 MNKLFKKLLIVSCVATIGVNLVACKSNKQESASSKNEIIIGMDDTFVPMGFKDGSGETVG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD +A+ + K+++ ++ + L + ID++ T R+ ++ Sbjct: 61 FDVDLAKAVGEKL---NKKVEFQSIDWSMKESELNNGNIDLIWNGYSITDERKENVEF-- 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD--YFKAHNMKYHPIVF 176 + + Q I I+S + L A + Q ++ + + + + F Sbjct: 116 SKVYLNNRQVIITLVDSKINSKNDLINAKVGAQNQSSAVDAIKADGDMMSKFDGGNVVTF 175 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E + A R DA D L ++ IL D A I +GDT Sbjct: 176 ETNNDALMDLEAGRIDAVVADE-ILAKYYTNERGKEKYKILNDDFGAEDYAVGIKKGDTS 234 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 + + +++ E G K + + Sbjct: 235 FVQEFNNALNSVI---EDGTGAKISEKWFGE 262 >gi|310778141|ref|YP_003966474.1| amino acid ABC transporter substrate-binding protein, PAAT family [Ilyobacter polytropus DSM 2926] gi|309747464|gb|ADO82126.1| amino acid ABC transporter substrate-binding protein, PAAT family [Ilyobacter polytropus DSM 2926] Length = 244 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 44/239 (18%), Positives = 91/239 (38%), Gaps = 20/239 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F++IL LI++ S + + ++ + G N F + +G GFD Sbjct: 1 MKK--FLNIL-LILVMLVSLAACGGKKEE--EKTVIHIGTNAEFPPFEYL-EDGKITGFD 54 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + ++ +I+ ++ ALQSK++D++ R+ ++ Sbjct: 55 MDLIKEIAKE---SQLEIKIEDMSFDGLLPALQSKKVDVVIAGMTANEERKKAVNF--TS 109 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y Q ++ + I+S L G + V G T +L +++ + +Y+ Sbjct: 110 PYYTASQVIVVKEGDSSINSFDDLKGKKVGVMLGFTGDLVVSEIEGVNIERYNAAY---- 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + ++ + DA D N+ I ++ A A+ + D E Sbjct: 166 -AGIMSLQSGKVDAVVLDSEPAKNYVEKNEG---LAIAKADAAEEEYAIAVRKEDKELL 220 >gi|238019865|ref|ZP_04600291.1| hypothetical protein VEIDISOL_01741 [Veillonella dispar ATCC 17748] gi|237863389|gb|EEP64679.1| hypothetical protein VEIDISOL_01741 [Veillonella dispar ATCC 17748] Length = 266 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 52/270 (19%), Positives = 101/270 (37%), Gaps = 22/270 (8%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K ++++ + + + N ++ G L+ G T F + + + GFDV Sbjct: 11 KKLTAIALVAVAAMGLLAGCGN-DKPKMTQQEGVLRVGSETTFPPFEFTEGD-KYVGFDV 68 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D A++ + K+++ + A+QS ID+++ + T RE +L + Sbjct: 69 DLSEAIAKKLG---LKMEFKSMGFDALIPAVQSGDIDMIAAGINATPEREKALDFSDV-- 123 Query: 122 TYFDGQGFIM---HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 YFD GFI I ++ +L+G ++ Q GT + Sbjct: 124 -YFDQGGFITVVRKDNTTIHNMDELAGHTVGAQIGTIPVE-----MAQKIPNTTVKQIDS 177 Query: 179 VEEIDAAYRAHRCDAYTGDIS-ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 I +A D D + A+Y LK D + ++ + + +G+ Sbjct: 178 NANIFMELKAGTIDGAIIDNAVAMYYLKQGAD--QDLKLVGEPTKAEGTVLGVKKGNKAL 235 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKD 267 V+ A+ +E G QK ++ D Sbjct: 236 QEAVN---KALKELKEDGTYQKIYDKWFGD 262 >gi|255092798|ref|ZP_05322276.1| amino acid ABC transporter, substrate-binding protein [Clostridium difficile CIP 107932] Length = 254 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 40/238 (16%), Positives = 83/238 (34%), Gaps = 12/238 (5%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 + + G + V + GD GFDVD + + ++++ P++ + Sbjct: 26 SKKEVVVGFDNTFVPMGFLDEKGDTVGFDVDLAKETFKRLG---MEVKFQPIDWSMKETE 82 Query: 92 LQ-SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150 L SK +D+L T R +++ + Q + I+S + L + Sbjct: 83 LNDSKTVDVLWNGYSITDER--KKIVSYTEPYLQNKQIIVTLSDSKINSKADLKDKEVGT 140 Query: 151 QAGTTTELTLA--DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 Q G+T + F P++++ ++ R A GD L + Sbjct: 141 QQGSTALDAVEKDKDFMNSLKGGAPVLYDTYDKALRDLEIGRTSAVVGDE-VLIRYYMGQ 199 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 ++ +L D A + + E ++ T M ++ G K ++ K Sbjct: 200 KGEDKYKVLKDDFGLEDYVVATSKENPELCEKINKTLKEM---KKDGTFDKIYDKWFK 254 >gi|254975411|ref|ZP_05271883.1| amino acid ABC transporter, substrate-binding protein [Clostridium difficile QCD-66c26] gi|255314540|ref|ZP_05356123.1| amino acid ABC transporter, substrate-binding protein [Clostridium difficile QCD-76w55] gi|255517215|ref|ZP_05384891.1| amino acid ABC transporter, substrate-binding protein [Clostridium difficile QCD-97b34] gi|255650321|ref|ZP_05397223.1| amino acid ABC transporter, substrate-binding protein [Clostridium difficile QCD-37x79] gi|260683434|ref|YP_003214719.1| amino acid ABC transporter substrate-binding protein [Clostridium difficile CD196] gi|260687030|ref|YP_003218163.1| amino acid ABC transporter substrate-binding protein [Clostridium difficile R20291] gi|306520288|ref|ZP_07406635.1| amino acid ABC transporter, substrate-binding protein [Clostridium difficile QCD-32g58] gi|260209597|emb|CBA63246.1| amino acid ABC transporter, substrate-binding protein [Clostridium difficile CD196] gi|260213046|emb|CBE04400.1| amino acid ABC transporter, substrate-binding protein [Clostridium difficile R20291] Length = 267 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 40/238 (16%), Positives = 83/238 (34%), Gaps = 12/238 (5%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 + + G + V + GD GFDVD + + ++++ P++ + Sbjct: 39 SKKEVVVGFDNTFVPMGFLDEKGDTVGFDVDLAKETFKRLG---MEVKFQPIDWSMKETE 95 Query: 92 LQ-SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150 L SK +D+L T R +++ + Q + I+S + L + Sbjct: 96 LNDSKTVDVLWNGYSITDER--KKIVSYTEPYLQNKQIIVTLSDSKINSKADLKDKEVGT 153 Query: 151 QAGTTTELTLA--DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 Q G+T + F P++++ ++ R A GD L + Sbjct: 154 QQGSTALDAVEKDKDFMNSLKGGAPVLYDTYDKALRDLEIGRTSAVVGDE-VLIRYYMGQ 212 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 ++ +L D A + + E ++ T M ++ G K ++ K Sbjct: 213 KGEDKYKVLKDDFGLEDYVVATSKENPELCEKINKTLKEM---KKDGTFDKIYDKWFK 267 >gi|24112233|ref|NP_706743.1| arginine 3rd transport system periplasmic binding protein [Shigella flexneri 2a str. 301] gi|30062345|ref|NP_836516.1| arginine 3rd transport system periplasmic binding protein [Shigella flexneri 2a str. 2457T] gi|24051080|gb|AAN42450.1| arginine 3rd transport system periplasmic binding protein [Shigella flexneri 2a str. 301] gi|30040590|gb|AAP16322.1| arginine 3rd transport system periplasmic binding protein [Shigella flexneri 2a str. 2457T] gi|281600186|gb|ADA73170.1| Arginine 3rd transport system periplasmic binding protein [Shigella flexneri 2002017] gi|313650230|gb|EFS14642.1| arginine-binding periplasmic protein 1 [Shigella flexneri 2a str. 2457T] Length = 243 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 50/269 (18%), Positives = 97/269 (36%), Gaps = 32/269 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ T ++ F + AN GFD Sbjct: 1 MKKVLIAALIAGFSLSATAAET-------------IRFATEAPYPPFESIDANNQIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL I + + +L+ ++++ + D T RE + Sbjct: 48 VDLAQALCKEIDATCT---FSNQAFDSLIPSLKFRRVEAVMAGMDITPEREKQVLFT--- 101 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+D + ++ +SV QL G + VQ GTT + + D + + + ++ + Sbjct: 102 TPYYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFIMD----KHPEITTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D+ GD + + D P + + K L A+ QG+TE Sbjct: 158 NAKLDLQNGRIDSVFGDTAVVTEWLK--DNPKLAAVGDKVTDKDYFGTGLGIAVRQGNTE 215 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVS 265 ++ A+ ++ G + N+ Sbjct: 216 LQQKLN---TALEKVKKDGTYETIYNKWF 241 >gi|254805377|ref|YP_003083598.1| histidine transport system substrate-binding protein [Neisseria meningitidis alpha14] gi|254668919|emb|CBA07124.1| histidine transport system substrate-binding protein [Neisseria meningitidis alpha14] gi|254670060|emb|CBA04906.1| glutamine transport system substrate-binding protein [Neisseria meningitidis alpha153] gi|254673285|emb|CBA08377.1| glutamine transport system substrate-binding protein [Neisseria meningitidis alpha275] gi|261392151|emb|CAX49659.1| putative amino acid-binding lipoprotein (HBP) [Neisseria meningitidis 8013] gi|325142784|gb|EGC65156.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria meningitidis 961-5945] gi|325198722|gb|ADY94178.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria meningitidis G2136] Length = 268 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 45/220 (20%), Positives = 79/220 (35%), Gaps = 10/220 (4%) Query: 37 KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96 + N F + + G+ +GFDVD A++ A KI++ F AL + Sbjct: 40 RVASNAEFAPFESLDSKGNVEGFDVDLMNAMAKA---GNFKIEFKHQPWDSLFPALNNGD 96 Query: 97 IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTT 155 D++ T R+ S+ + Q ++ K K ISS L + V G T Sbjct: 97 ADVVMSGVTITDDRKQSMDF--SDPYFEITQVVLVPKGKKISSSDDLKNMNKVGVVTGYT 154 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS-EH 214 + +++ N FE V I D+ D + + N + Sbjct: 155 GDFSVSKLLG--NDNPKIARFENVPLIIKELENGGLDSVVSDSAVIANYVKNNPTKGMDF 212 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 V LPD + A+ +GD +++ + + E Sbjct: 213 VTLPD-FTTEHYGIAVRKGDEATVKMLNDALEKVRESGEY 251 >gi|312958494|ref|ZP_07773014.1| amino acid ABC transporter [Pseudomonas fluorescens WH6] gi|311287037|gb|EFQ65598.1| amino acid ABC transporter [Pseudomonas fluorescens WH6] Length = 265 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 50/272 (18%), Positives = 101/272 (37%), Gaps = 17/272 (6%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K + +L + + + A + D KRG LK G++ + F GD GF+V Sbjct: 1 MKKYLSMLLLGVTALVAATAAQAGAIDDAVKRGTLKVGMDPTYMPFEMTDKRGDIIGFEV 60 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D +A++ ++ K++ + A + + D++ T R L L F Sbjct: 61 DILKAMAKSMG---VKLELVSTGYDGIIPAFLTGKFDMIGSGMTLTQERN--LRLNFSEP 115 Query: 122 TYFDGQGFIMHK--KKGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 GQ ++ K + I S L+ + + GTT E+ ++ Sbjct: 116 FIVVGQTLLIRKELEGTIKSYKDLNDEKYRLTSKLGTTGEMVAKKLIAKAKY----HGYD 171 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 +E + DA+ D + + V L + + PLA + +GD Sbjct: 172 NEQEGVLDVVNGKADAFVYDAPYNVVAEKKVGN-GKLVFLDEPFTFEPLAFGLKKGD--- 227 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 Y+ +++ + + + G + ++ K + Sbjct: 228 YDSINFINNFLHQIKNDGTYDRIHDKWFKSSE 259 >gi|153812542|ref|ZP_01965210.1| hypothetical protein RUMOBE_02941 [Ruminococcus obeum ATCC 29174] gi|149831467|gb|EDM86555.1| hypothetical protein RUMOBE_02941 [Ruminococcus obeum ATCC 29174] Length = 289 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 50/255 (19%), Positives = 92/255 (36%), Gaps = 32/255 (12%) Query: 1 MYKDFFVSILCLIILF--FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K ++ ++ ++ S A I L G + + + NG++ G Sbjct: 1 MKKKAVAVVMTAVMALGMVSAVSVQAGIEDK-----TLIVGFDAEYPPYGYMDENGEYTG 55 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD++ +A+ + +++ P+N + + L S ID + F Sbjct: 56 FDLELAQAVCD---LEGWELEKKPINWDSKDMELNSGSIDCIWNGFTMN---GREDDYTF 109 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT-----------ELTLADYFKAH 167 + Q ++ GI ++ L+G ++ VQA + + LAD F A Sbjct: 110 SEPYVDNSQVIVVADDSGIEKLTDLAGKTVGVQAASAALDLLQSEEEGGQKELADTFGAL 169 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 N F +A DA D+ A N R IL + ++ A Sbjct: 170 N------EFADYNTAFTELQAGALDALAIDVGV--AKYQLNSRGEGFKILDETLNTEQYA 221 Query: 228 PAIIQGDTEWYNIVS 242 +G+TE +IV+ Sbjct: 222 IGFKKGNTELCDIVN 236 >gi|255598562|ref|XP_002537036.1| Cystine-binding periplasmic protein precursor, putative [Ricinus communis] gi|223517731|gb|EEF25348.1| Cystine-binding periplasmic protein precursor, putative [Ricinus communis] Length = 271 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 42/252 (16%), Positives = 78/252 (30%), Gaps = 12/252 (4%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQ 79 + A +L +K RG L+ + F G G+DV+ R L++ + P + Sbjct: 29 AHAADLLDTVKARGTLRIAMEGTYPPFNYKDKKTGQLTGYDVEVARLLAARMGLKP---E 85 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 ++ L + + D++ T RE + + + S Sbjct: 86 FISTEWSAILAGLGAGKYDVIVAQVGITPKREATFDFSVPYTYSIPQLVVRNNDTTSYKS 145 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 ++ L G + V GT E L KA + E R DA D Sbjct: 146 LADLKGKKVGVGQGTVFEQQL----KAAPPGIDIKSYPATPETLQDLAFGRIDAALQDSL 201 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 + L + P + S + +G+ ++ + L Q Sbjct: 202 MVNYLVKNSHLP--LRGGARVGEISRMGIPFQKGNPKFKAALDKAIEDARADGSLK--QL 257 Query: 260 NINQVSKDTTNP 271 ++ D + P Sbjct: 258 SMKWFGTDASRP 269 >gi|220903864|ref|YP_002479176.1| extracellular solute-binding protein family 3 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868163|gb|ACL48498.1| extracellular solute-binding protein family 3 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 247 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 42/253 (16%), Positives = 79/253 (31%), Gaps = 21/253 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + F ++L L + + + + + N GFD Sbjct: 1 MIRRFAFALLVLTLFCGQALAAE-----------KYVVATDCTWPPMELLDENKQPVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDF + A + + + F + + Q DI++ T T R+ F Sbjct: 50 VDFITEVGKAAGFE---VDVRNIAWDGIFGGVATGQYDIVAAATTITPERQKQ--FDFSD 104 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y Q ++ + I S+ L G + Q GTT + + + ++ V Sbjct: 105 PYYEVAQAVVLPAGQNIKSLDDLKGKKVGGQIGTTGVFVI----RKSGVPVDLKEYDDVG 160 Query: 181 EIDAAYRAHRCDAYTGDIS-ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 R DA D A+Y D + + K + +G T+ Sbjct: 161 LAIQDMLGGRIDAVICDEPVAMYYANKKADTAGKLNLSFKTAEKEYYGFTVRKGRTDLVE 220 Query: 240 IVSWTHYAMVTAE 252 ++ A+ + Sbjct: 221 KLNKGIKAVKASG 233 >gi|259502847|ref|ZP_05745749.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus antri DSM 16041] gi|259169214|gb|EEW53709.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus antri DSM 16041] Length = 282 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 45/271 (16%), Positives = 94/271 (34%), Gaps = 17/271 (6%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 T+ + I++R + G++ V + +G G+DVD RA+ Sbjct: 25 SVTTRANTQDTWSRIERRKKVVIGLDDSFVPMGFREKSGKLVGYDVDLARAVFKQYG--- 81 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 K+ + ++ + L++ ID+L R+ + + + Q + K Sbjct: 82 IKVDFQTIDWSMKETELKNGTIDLLWNGYSMNPSRKKKVAFSR--PYLENRQVLVTKKSS 139 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH---PIVFERVEEIDAAYRAHRCD 192 I ++ ++G S+ VQ G+T L K K ++++ + A+R Sbjct: 140 HIDGLNGMAGKSLGVQNGSTGAAVLDAKPKLLKDKIKNKSAVLYDTFPDAFIDLNANRIQ 199 Query: 193 AYTGDISAL-YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 D Y + D+ + V + + +GD + + Sbjct: 200 GILMDQVYADYYVDHQKDKNAYKVYESKQLPVEYFGVGMRKGDKTLQ---KKINQGLGRL 256 Query: 252 EELGITQKNINQVSKDTTNPDVQRFLGIDKS 282 ++ G +K + +N FLG D Sbjct: 257 QKDGQLRKINEKWFGRDSN-----FLGPDSE 282 >gi|226314898|ref|YP_002774794.1| amino acid ABC transporter substrate binding protein [Brevibacillus brevis NBRC 100599] gi|226097848|dbj|BAH46290.1| probable amino acid ABC transporter substrate binding protein [Brevibacillus brevis NBRC 100599] Length = 267 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 79/231 (34%), Gaps = 11/231 (4%) Query: 37 KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96 G + F ++A+ G D+D A++ A KI++ F L Sbjct: 47 VVGTDAAYPPFQMLEAD-KISGHDIDVMNAIAEA---GGFKIEWKNTGWDPLFDGLDKGT 102 Query: 97 IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT 156 +DI + T R+ + + Q ++ + ++ ++ L G I VQA TT Sbjct: 103 VDIGISSITITEKRKEKYDFSDS--YFEANQLILVAEDSPVTKLADLKGKKIGVQAATTG 160 Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216 E + F ++ + + R DA GD L +I Sbjct: 161 EEVVKKAFGDTYEGLK--GYDDMPSSVDDFFNGRVDAVIGDNGVLSYYVNKVKDKKFKLI 218 Query: 217 LPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 D K + +G+ + ++ + + +E G Q+ Q + Sbjct: 219 KDDSFEKEFYGIIVKKGNA---DAINKINDGLKKIKENGKLQEIYTQYFGN 266 >gi|332111085|gb|EGJ11117.1| extracellular solute-binding protein [Rubrivivax benzoatilyticus JA2] Length = 285 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 32/206 (15%), Positives = 67/206 (32%), Gaps = 7/206 (3%) Query: 38 CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97 G + F G+ GFD+D +A+++ + ++++ + F +L Sbjct: 52 VGTDAAYAPFESQDEKGEIVGFDIDVLKAIAAKAGFE---VKFINTPWEGIFNSLGQGDR 108 Query: 98 DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157 DI+ T R+ +L + + Q + ++ + L + VQ GTT + Sbjct: 109 DIVISAVTITDERKQTLDFSDA--YFDAAQLIAVRDNSKVTKFADLKKLKVGVQTGTTGD 166 Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 + + FE + DA D + N I Sbjct: 167 EAVTKLQGKTSTNIK--RFESTPLALKELESGGVDAVVADNGVVIHHVANNPGAKFKTIS 224 Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSW 243 + A+ +G+T ++ Sbjct: 225 DTEFAPEQYGIAVKKGNTAVLEKINQ 250 >gi|325204584|gb|ADZ00038.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria meningitidis M01-240355] Length = 268 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 45/220 (20%), Positives = 79/220 (35%), Gaps = 10/220 (4%) Query: 37 KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96 + N F + + G+ +GFDVD A++ A KI++ F AL + Sbjct: 40 RVASNAEFAPFESLDSKGNVEGFDVDLMNAMAKA---GNFKIEFKHQPWDSLFPALNNGD 96 Query: 97 IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTT 155 D++ T R+ S+ + Q ++ K K ISS L + V G T Sbjct: 97 ADVVMSGVTITDDRKQSMDF--SDPYFEITQVVLVPKGKKISSSDDLKNMNKVGVVTGYT 154 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS-EH 214 + +++ N FE V I D+ D + + N + Sbjct: 155 GDFSVSKLLG--NDNPKIARFENVPLIIKELENGGLDSVVSDSAVIANYVKNNPAKGMDF 212 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 V LPD + A+ +GD +++ + + E Sbjct: 213 VTLPD-FTTEHYGIAVRKGDEATVKMLNDALEKVRESGEY 251 >gi|227432357|ref|ZP_03914349.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227351878|gb|EEJ42112.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 490 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 46/274 (16%), Positives = 95/274 (34%), Gaps = 20/274 (7%) Query: 2 YKDFFVSILCLIILFFTSFSTNASI------LGDIKKRGFLKCGINTGLVGFAE---VKA 52 + + +++ T+A L IKK+G L G++ F V Sbjct: 7 KISIVIMTITMLLPLLAVLPTHADAATTDPALTKIKKKGTLVIGLSADYAPFEFHATVYG 66 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 GFDV+ + ++ + P + ALQ+ +ID++ + T RE Sbjct: 67 RDQIVGFDVEMAKKIAKDLGVKPV---IKEMGFDGLIGALQTGKIDVIISGVNATPEREK 123 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISS-VSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 + + + + S ++ SG I VQ TT E Y + Sbjct: 124 VVDFSNSYMKPLQTVMVLKKDASKYSGNLNSFSGKKIGVQKQTTQET----YAQESMSGS 179 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS-PLAPAI 230 + ++V ++ A + + + T + +I P S ++ A+ Sbjct: 180 TIVSLQKVPDLVAQLSTGKIAGIVLNEPI--SKAYTQQNKAFKIIYPKPSSGEGAVSIAM 237 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 + ++ + ++ + EL QK N++ Sbjct: 238 PKNSPVLKAKINKSLGNIIKSGELEAYQKRANKL 271 >gi|194428243|ref|ZP_03060786.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli B171] gi|194413803|gb|EDX30082.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli B171] Length = 243 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 50/269 (18%), Positives = 96/269 (35%), Gaps = 32/269 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ T ++ F + AN GFD Sbjct: 1 MKKVLIAALIAGFSLSATAAET-------------IRFATEASYPPFESIDANNQIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL I + + +L+ ++++ + D T RE + Sbjct: 48 VDLAQALCKEIDATCT---FSNQAFDSLIPSLKFRRVEAVMAGMDITPEREKQVLFT--- 101 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+D + ++ +SV QL G + VQ GTT + + D + + + ++ + Sbjct: 102 TPYYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFIMD----KHPEITTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + D P + + K L A+ QG+TE Sbjct: 158 NAKLDLQNGRIDGVFGDTAVVTEWLK--DSPKLAAVGDKVTDKDYFGTGLGIAVRQGNTE 215 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVS 265 ++ A+ ++ G + N+ Sbjct: 216 LQQKLN---TALEKVKKDGTYETIYNKWF 241 >gi|304386971|ref|ZP_07369229.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Neisseria meningitidis ATCC 13091] gi|304338928|gb|EFM05024.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Neisseria meningitidis ATCC 13091] Length = 268 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 45/220 (20%), Positives = 79/220 (35%), Gaps = 10/220 (4%) Query: 37 KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96 + N F + + G+ +GFDVD A++ A KI++ F AL + Sbjct: 40 RVASNAEFAPFESLDSKGNVEGFDVDLMNAMAKA---GNFKIEFKHQPWDSLFPALNNGD 96 Query: 97 IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTT 155 D++ T R+ S+ + Q ++ K K ISS L + V G T Sbjct: 97 ADVVMSGVTITDDRKQSMDF--SDPYFEITQVVLVPKGKKISSSEDLKNMNKVGVVTGYT 154 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS-EH 214 + +++ N FE V I D+ D + + N + Sbjct: 155 GDFSVSKLLG--NDNPKIARFENVPLIIKELENGGLDSVVSDSAVIANYVKNNPAKGMDF 212 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 V LPD + A+ +GD +++ + + E Sbjct: 213 VTLPD-FTTEHYGIAVRKGDEATVKMLNDALEKVRESGEY 251 >gi|296333448|ref|ZP_06875901.1| High affinity arginine ABC transporter binding lipoprotein [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675046|ref|YP_003866718.1| high affinity arginine ABC transporter binding lipoprotein [Bacillus subtilis subsp. spizizenii str. W23] gi|296149646|gb|EFG90542.1| High affinity arginine ABC transporter binding lipoprotein [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413290|gb|ADM38409.1| High affinity arginine ABC transporter binding lipoprotein [Bacillus subtilis subsp. spizizenii str. W23] Length = 255 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 51/259 (19%), Positives = 99/259 (38%), Gaps = 11/259 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + I ++ +++S KK + G + F + + + GFD Sbjct: 1 MKKWLLLLVAACITFALSACGSSSSGSESGKK--KIIMGTSADYKPFEYKEGD-NIVGFD 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL+ + I+ ++ AL+SKQ+D++ T R+ + Sbjct: 58 VDLAKALAKKTGYE---IEVQDMDFNSLITALKSKQVDLVLSGMTPTPERKKQVDF--SD 112 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y + K GI+S+ L G ++ VQ G+ E + + + R+ Sbjct: 113 VYYTANHMIVSKKDSGITSLKDLKGKTVGVQLGSIQEEKGKELSPEYGFQTEDR--NRIS 170 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 ++ ++ R DA + +ND VI ++ A A + D+E + Sbjct: 171 DLVQEIKSDRFDAAIIEDMVAEGYFKSNDDLQGFVIPDAKAEEAGSAIAFRK-DSELTDK 229 Query: 241 VSWTHYAMVTAEELGITQK 259 + M EL +K Sbjct: 230 FNKALKEMEDNGELEKLKK 248 >gi|224368640|ref|YP_002602803.1| ABC-type amino acid transporter, periplasmic amino acid-binding protein [Desulfobacterium autotrophicum HRM2] gi|223691356|gb|ACN14639.1| ABC-type amino acid transporter, periplasmic amino acid-binding protein [Desulfobacterium autotrophicum HRM2] Length = 267 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 66/275 (24%), Positives = 107/275 (38%), Gaps = 19/275 (6%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K L +I S + A+ L DI KRG L+ + +G +A + NGD G Sbjct: 1 MKLKQMLTMALAFLIALSFSGLSFANNLTDIVKRGELRVAVQSGNPPYAFIDKNGDHTGS 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 ++F + ++ A+ K++ L + AL S + DIL+ + TL R SL + F Sbjct: 61 MIEFTKGMADAMG---VKLKILDFDWDGLIPALLSGKADILAADMTPTLKR--SLKITFT 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + K ++ ++ + ++ V G+T E Y +K + Sbjct: 116 DPWIYVQPCIFTRTDKAYQTLEDVNKSDVTVGVLLGSTGENIARTYLPNAKIKAYKGGGR 175 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV-ILPDII--SKSPLAPAIIQGD 234 I A A DA D L L + +D P V +L + K PLA A+ Sbjct: 176 M---IVQALVAGHVDAGVNDD--LAVLTVLSDFPPNSVRLLDKRLGQGKDPLAFAVRH-- 228 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 E N+ W + T G +NI + Sbjct: 229 -EAVNLWQWINLYFQTIRSSGEYDRNIAYWMEGID 262 >gi|325063882|gb|ADY67572.1| amino acid ABC transporter, substrate binding protein [Agrobacterium sp. H13-3] Length = 278 Score = 130 bits (326), Expect = 5e-28, Method: Composition-based stats. Identities = 41/251 (16%), Positives = 87/251 (34%), Gaps = 14/251 (5%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 F A + + K +G + GI + V ++G G D D +A + + Sbjct: 24 FIAPVDAFAGTVDEAKAKGKVVIGIQGDNSPWGFVNSSGVQDGLDADIGKAFAEYLG--- 80 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 K++++PL R AL + ++D+L T R ++ + K K Sbjct: 81 VKVEFVPLAVANRIPALLTGKVDLLFATMGMTAERAKTIQY--SKPYAGNVLSVYGPKDK 138 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I + L+G S+ V + + + K + F+ A + + + Sbjct: 139 KIGNYDDLTGVSVGVPKSSAMDTAITA---GAGSKAKILRFDDDAANIQALISGQVEVVG 195 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 G+ Y +L ++ ++ G+ +W V+ + + +L Sbjct: 196 GN--QFYGDRLNQAANGKYE-PKFDLTTLYNGAGTRPGEKDWNETVNAFLDKIKSDGQL- 251 Query: 256 ITQKNINQVSK 266 K ++ K Sbjct: 252 --AKIYDKWMK 260 >gi|322615516|gb|EFY12436.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322618576|gb|EFY15465.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622011|gb|EFY18861.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322627083|gb|EFY23875.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631042|gb|EFY27806.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322637739|gb|EFY34440.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322642403|gb|EFY39007.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322645664|gb|EFY42189.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650496|gb|EFY46904.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322659725|gb|EFY55968.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322662064|gb|EFY58280.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322666187|gb|EFY62365.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322672607|gb|EFY68718.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676037|gb|EFY72108.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322680521|gb|EFY76559.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322684585|gb|EFY80589.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323192900|gb|EFZ78126.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323197224|gb|EFZ82364.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323201659|gb|EFZ86723.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323206173|gb|EFZ91135.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323215555|gb|EGA00299.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323219540|gb|EGA04025.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323227843|gb|EGA11997.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229013|gb|EGA13142.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323236375|gb|EGA20451.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237505|gb|EGA21566.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323241829|gb|EGA25858.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248022|gb|EGA31959.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323254647|gb|EGA38458.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323258294|gb|EGA41971.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323259571|gb|EGA43205.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323265844|gb|EGA49340.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270288|gb|EGA53736.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 246 Score = 130 bits (326), Expect = 5e-28, Method: Composition-based stats. Identities = 44/264 (16%), Positives = 90/264 (34%), Gaps = 28/264 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V +L + + S S L G + + V A+ GFD Sbjct: 1 MKKKLIVMLLASLSVHAASVSAR-----------TLHFGTSATYAPYEFVDADNKIVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + + S + + L+ K+ D + D T RE + + Sbjct: 50 IDVANAVCKEMQAECS---FTNQSFDSLIPGLRFKKFDAVIAGMDMTPKREQQVSFSQ-- 104 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y ++ +K + + L G + ++ GTT + L D P+ ++ Sbjct: 105 PYYEGLSAVVVTRKGAYHTFADLKGKKVGLENGTTHQRYLQD----KQQAITPVAYDSYL 160 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235 + +R + GD++A+ N + I+ + S A+ +G+ Sbjct: 161 NAFTDLKNNRLEGVFGDVAAIGKWLKNNPN---YAIMDERASDPDYYGKGLGIAVRKGND 217 Query: 236 EWYNIVSWTHYAMVTAEELGITQK 259 ++ + + E Q+ Sbjct: 218 ALLQEINAALDKVKASPEYAQMQE 241 >gi|110804857|ref|YP_688377.1| arginine 3rd transport system periplasmic binding protein [Shigella flexneri 5 str. 8401] gi|110614405|gb|ABF03072.1| arginine 3rd transport system periplasmic binding protein [Shigella flexneri 5 str. 8401] Length = 243 Score = 130 bits (326), Expect = 5e-28, Method: Composition-based stats. Identities = 41/267 (15%), Positives = 91/267 (34%), Gaps = 28/267 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L ++ + G++ F + AN + GFD Sbjct: 1 MKKLVLAALLASFTFGASAAE-------------KINFGVSATYPPFESIGANNEIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + + + + +L+ ++ D + D T R + Sbjct: 48 IDLAKALCKQMQAECT---FTNHAFDSLIPSLKFRKYDAVISGMDITPERSKQVSFT--- 101 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y++ ++ KK + + L G I ++ GTT + + D + + + ++ + Sbjct: 102 TPYYENSAVVISKKDTYKTFADLKGKRIGMENGTTHQKYIQD----QHPEVKTVSYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R D GD + + TN + + + + L A+ + Sbjct: 158 NAFIDLKNGRIDGVFGDTAVVNEWLKTNPQLGVATEKVTDQQYFGTGLGIAVRPDNKALL 217 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVS 265 ++ A+ G QK +Q Sbjct: 218 EKLNNALAAIKA---DGTYQKINDQWF 241 >gi|170683620|ref|YP_001742971.1| arginine ABC transporter periplasmic arginine-binding protein ArtI [Escherichia coli SMS-3-5] gi|170521338|gb|ACB19516.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli SMS-3-5] Length = 243 Score = 130 bits (326), Expect = 5e-28, Method: Composition-based stats. Identities = 50/269 (18%), Positives = 97/269 (36%), Gaps = 32/269 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ T ++ F + AN GFD Sbjct: 1 MKKVLIAALIAGFSLSATAAET-------------IRFATEASYPPFESIDANNQIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL I + + +L+ ++++ + D T RE + Sbjct: 48 VDLAQALCKEIDATCT---FSNQAFDRLIPSLKFRRVEAVMAGMDITPEREKQVLFT--- 101 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+D + ++ +SV QL G + VQ GTT + + D + + + ++ + Sbjct: 102 TPYYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFIMD----KHPEITTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D+ GD + + D P + + K L A+ QG+TE Sbjct: 158 NAKLDLQNGRIDSVFGDTAVVTEWLK--DNPKLAAVGDKVTDKDYFGTGLGIAVRQGNTE 215 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVS 265 ++ A+ ++ G + N+ Sbjct: 216 LQQKLN---TALEKVKKDGTYETIYNKWF 241 >gi|283784630|ref|YP_003364495.1| arginine ABC transporter, substrate-binding protein [Citrobacter rodentium ICC168] gi|282948084|emb|CBG87649.1| arginine ABC transporter, substrate-binding protein [Citrobacter rodentium ICC168] Length = 243 Score = 130 bits (326), Expect = 5e-28, Method: Composition-based stats. Identities = 50/267 (18%), Positives = 93/267 (34%), Gaps = 28/267 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ T ++ F + AN GFD Sbjct: 1 MKKVLIAALIAGFSLSATAAQT-------------IRFATEASYPPFESMDANNKIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL I + + +L+ ++ D + D T RE + Sbjct: 48 VDLANALCKEIDATCT---FTNQAFDSLIPSLKFRRFDAVMAGMDITPEREKQVLFT--- 101 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+D + ++ +SV QL G + VQ GTT + + D + + + ++ + Sbjct: 102 TPYYDNSALFIGQQGKFTSVEQLKGKKVGVQNGTTHQKFIMD----KHPEITTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R D GD + + N + P + + L A+ QG+TE Sbjct: 158 NAKLDLQNGRIDGVFGDTAVVTEWLKDNPKLAPVGDKVTDKDYFGTGLGIAVRQGNTELQ 217 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVS 265 + A+ ++ G + N+ Sbjct: 218 QKFN---AALEKVKKDGTYETIYNKWF 241 >gi|239999700|ref|ZP_04719624.1| Histidine-binding protein precursor [Neisseria gonorrhoeae 35/02] gi|268595514|ref|ZP_06129681.1| histidine-binding protein [Neisseria gonorrhoeae 35/02] gi|584826|sp|Q06758|HISJ_NEIGO RecName: Full=Histidine-binding protein; Short=HBP; Flags: Precursor gi|49068|emb|CAA45768.1| unnamed protein product [Neisseria gonorrhoeae] gi|268548903|gb|EEZ44321.1| histidine-binding protein [Neisseria gonorrhoeae 35/02] gi|317165013|gb|ADV08554.1| ABC transporter, periplasmic histidine-binding protein precursor [Neisseria gonorrhoeae TCDC-NG08107] Length = 268 Score = 130 bits (326), Expect = 5e-28, Method: Composition-based stats. Identities = 47/237 (19%), Positives = 82/237 (34%), Gaps = 11/237 (4%) Query: 37 KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96 + N F + + G+ +GFDVD A++ A KI++ F AL + Sbjct: 40 RVASNAEFAPFESLDSKGNVEGFDVDLMNAMAKA---GNFKIEFKHQPWDSLFPALNNGD 96 Query: 97 IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTT 155 DI+ T R+ S+ + Q ++ K K +SS L + V G T Sbjct: 97 ADIVMSGVTITDDRKQSMDF--SDPYFEITQVVLVPKGKKVSSSDDLKKMNKVGVVTGHT 154 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS-EH 214 + +++ N FE V I D+ D + + N + Sbjct: 155 GDFSVSKLLG--NDNPKIARFENVPLIIKELENGGLDSVVSDSAVIANYVKNNPAKGMDF 212 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSKDTTN 270 V LPD + A+ +GD +++ + + E I K + Sbjct: 213 VTLPD-FTTEHYGIAVRKGDEATVKMLNDALEKVRESGEYDKIYAKYFAKEGGQAAK 268 >gi|283456107|ref|YP_003360671.1| putative solute binding protein of ABC transporter [Bifidobacterium dentium Bd1] gi|283102741|gb|ADB09847.1| Predicted solute binding protein of ABC transporter system [Bifidobacterium dentium Bd1] Length = 261 Score = 130 bits (326), Expect = 5e-28, Method: Composition-based stats. Identities = 45/274 (16%), Positives = 87/274 (31%), Gaps = 20/274 (7%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 +S I T+ + G+ T G + D+ GFD+ R Sbjct: 1 MSACGTSISVVTNGQAQGPT---------ITIGVATDQPGLGLLHGK-DYSGFDITVARY 50 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 ++ + ++ + + R AL S +D++ + + + A +T Sbjct: 51 VAQYLGFADKQVVFAKVIPSTRVSALTSGDVDMVVDSFATNTDHDDEVTFAGPYLTVRRD 110 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 K GI SV L G ++C G+ + + + K + + A Sbjct: 111 LLIRADDKDGILSVDDLDGKTVCTAKGSISGSDMRNL----TDKMTVEERDTYPQCVTAL 166 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 DA D + L L + ++ + + A+ G +E + Sbjct: 167 MIGEADAIISDDAILTGLAA-DRGGGYLKVVGEPFGEQSYGIAVRNGKSELVGQIDAALK 225 Query: 247 AMVTAEELGITQKNINQ-----VSKDTTNPDVQR 275 AMV + + Q V + P V+R Sbjct: 226 AMVADGSWSSAVQALKQDIGYTVDVSSNPPTVRR 259 >gi|320546646|ref|ZP_08040958.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus equinus ATCC 9812] gi|320448701|gb|EFW89432.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus equinus ATCC 9812] Length = 280 Score = 130 bits (326), Expect = 5e-28, Method: Composition-based stats. Identities = 38/276 (13%), Positives = 84/276 (30%), Gaps = 18/276 (6%) Query: 2 YKDFFVSILCLIILFFTSFSTNA-------SILGDIKKRGFLKCGINTGLVGFAEVKANG 54 K +++ + + + +++ K G + G + V +G Sbjct: 4 KKILLSALVLVSTVALAACGSSSSKKVSNTDQWDSYVKDGKITIGFDNTFVPMGYEDEDG 63 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 GFD+D A+ + K+++ +N + L + ID++ T R + Sbjct: 64 KNVGFDIDLANAVFAEYG---IKVKWQSINWDMKETELNNGTIDLIWNGYSITDERSEKV 120 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN---MKY 171 + Q + K I+S + + G + Q+G++ K Sbjct: 121 RF--TNPYMINEQVLVTKKSSDITSFAGMKGKVLGAQSGSSGYDAFNANPKVLKNIVSGG 178 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 +E + + R D D ++ I+ A Sbjct: 179 DATQYETFTQALIDLKNDRIDGLLIDKVYANYYLEQEGELDKYNIISSEFDGEDFAVGAR 238 Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 + D +V + A + G Q+ N+ + Sbjct: 239 KAD---KTLVKKINQAFQKLYKDGKFQEISNKWFGE 271 >gi|240126454|ref|ZP_04739340.1| Histidine-binding protein precursor [Neisseria gonorrhoeae SK-92-679] gi|268685042|ref|ZP_06151904.1| amino acid ABC transporter [Neisseria gonorrhoeae SK-92-679] gi|268625326|gb|EEZ57726.1| amino acid ABC transporter [Neisseria gonorrhoeae SK-92-679] Length = 268 Score = 130 bits (326), Expect = 5e-28, Method: Composition-based stats. Identities = 47/237 (19%), Positives = 82/237 (34%), Gaps = 11/237 (4%) Query: 37 KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96 + N F + + G+ +GFDVD A++ A KI++ F AL + Sbjct: 40 RVASNAEFAPFESLDSKGNVEGFDVDLMNAMAKA---GNFKIEFKHQPWDSLFPALNNGD 96 Query: 97 IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTT 155 DI+ T R+ S+ + Q ++ K K +SS L + V G T Sbjct: 97 ADIVMSGVTITDDRKQSMDF--SDPYFEITQVVLVPKGKKVSSSEDLKKMNKVGVVTGHT 154 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS-EH 214 + +++ N FE V I D+ D + + N + Sbjct: 155 GDFSVSKLLG--NDNPKIARFENVPLIIKELENGGLDSVVSDSAVIANYVKNNPAKGMDF 212 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSKDTTN 270 V LPD + A+ +GD +++ + + E I K + Sbjct: 213 VTLPD-FTTEHYGIAVRKGDEATVKMLNDALEKVRESGEYDKIYAKYFAKEGGQAAK 268 >gi|90419462|ref|ZP_01227372.1| putative solute-binding protein [Aurantimonas manganoxydans SI85-9A1] gi|90336399|gb|EAS50140.1| putative solute-binding protein [Aurantimonas manganoxydans SI85-9A1] Length = 259 Score = 130 bits (326), Expect = 5e-28, Method: Composition-based stats. Identities = 48/238 (20%), Positives = 82/238 (34%), Gaps = 18/238 (7%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 L + + A L G N G V + N + GF+VD + ++ Sbjct: 3 AAATTALLLVAGPSLAETL---------TAGANIGNVPWEFQDENSEIVGFEVDLLKKVA 53 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 + D IQ +P N F A+QS +ID+ + T R S+ A Y Q Sbjct: 54 DRLGYDEVDIQNVPFNG--LFSAVQSGRIDVAISSITITDERLQSVSFAQ--PYYDSDQS 109 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 GI+ L G ++ V G+T ++ + + +E + A Sbjct: 110 LSTRADSGIAGSGDLKGKTVGVDTGSTGDIYSTERESEWGLA-GISRYEGLSPAMLDLAA 168 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 R DAY DI A+ E ++ + + + + D+E + Sbjct: 169 GRIDAYVSDIPAVAYY---LKDKPEMKVVERLATGEQYSMMFAK-DSELAGKANEVLT 222 >gi|329766799|ref|ZP_08258329.1| hypothetical protein HMPREF0428_00026 [Gemella haemolysans M341] gi|328839310|gb|EGF88892.1| hypothetical protein HMPREF0428_00026 [Gemella haemolysans M341] Length = 273 Score = 130 bits (326), Expect = 5e-28, Method: Composition-based stats. Identities = 46/278 (16%), Positives = 107/278 (38%), Gaps = 23/278 (8%) Query: 1 MYKD--FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANGD 55 M K F SI+ ++ L S S+ + L ++K++ + G++ + + N Sbjct: 1 MKKLLLFITSIITVVTLTACSSSSTKNKLQEVKEKNKIVLGVSPDYPPYEFLTTENGNKK 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G D+ +S + +++ + AL + ++D++ + T R+ ++ Sbjct: 61 VVGADIYLAEQVSKKLG---VQVEIQQMAFDSLIAALNANKVDMVISGVNPTEERKKAVD 117 Query: 116 LAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + + Y F+++K I SV+ L I VQ G+T E + K + Sbjct: 118 FSE--VYYTSKGIFVVNKDSEEIKSVADLKNKKIGVQKGSTYETYAKEQLK--MDDKNIQ 173 Query: 175 VFERVEEIDAAYRAHRCDAY-TGDISALYALKLTNDRPSEHVILPDIISKSP----LAPA 229 V + + + DA D A K+ ++ ++ I P +A A Sbjct: 174 ALTDVPSLLQDLKNKKIDAVLIPDDVA----KIAMNKYTDIKISTFTADNDPEATGMAIA 229 Query: 230 IIQ-GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 + + ++ + + ++ +K +++ +K Sbjct: 230 FKKGKNDSNKELLEQVNAVIKEIQDQKAFEKELDKYAK 267 >gi|317472310|ref|ZP_07931638.1| extracellular solute-binding protein, family 3 [Anaerostipes sp. 3_2_56FAA] gi|316900267|gb|EFV22253.1| extracellular solute-binding protein, family 3 [Anaerostipes sp. 3_2_56FAA] Length = 201 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 37/185 (20%), Positives = 70/185 (37%), Gaps = 11/185 (5%) Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 +++ + A R LQS ++D++ N T R + + G + K I+ Sbjct: 2 EFVLVEAASRVEFLQSNKVDVILANFTVTDER--KEVVDYALPYMKVSLGVVSPNGKVIT 59 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 V QL G + V GTT E YF + +++ E A + R A D Sbjct: 60 DVKQLKGKKLIVNKGTTAET----YFTQKYPDIELLKYDQNTEAFNALKDGRGAALAHDN 115 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 + +YA + + + +APA+ +G+ + W + + G + Sbjct: 116 TLVYAWA--RENKGFTTGIKSLGEHDFIAPAVKKGNDDLK---GWIDDEITKLTKEGFFE 170 Query: 259 KNINQ 263 K+ + Sbjct: 171 KDYKK 175 >gi|300722507|ref|YP_003711797.1| arginine ABC transporter periplasmic-binding protein [Xenorhabdus nematophila ATCC 19061] gi|297629014|emb|CBJ89599.1| arginine transport protein (ABC superfamily, peri_bind) [Xenorhabdus nematophila ATCC 19061] Length = 245 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 48/269 (17%), Positives = 99/269 (36%), Gaps = 30/269 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F ++L ++ L T+ ++ L+ F + N +GFD Sbjct: 1 MKKLLFTALLSVMALSATAA-----------EKTTLRFATEATYPPFEFIDTNNKIQGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ I + + + +L+ ++ D L D T R+ + Sbjct: 50 IDLTNAICEKINSECT---FTNQAFDSLIPSLKFRRFDALMAGIDITPERQKQVDFTH-- 104 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 TY+D + K S+++ L I +Q GTT + L + + + + ++ + Sbjct: 105 -TYYDNSAIFIAIKGKFSNIADLKNKQIGIQNGTTHQKYLME----QHKEIKTVPYDSYQ 159 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235 + R DA GD + ++ N E V + + ++ A+ +G+T Sbjct: 160 NAILDLKNGRIDAVFGDTAVVHEWLRKNK---ELVTIGNKVTDKNYFGTGLGIAVRKGNT 216 Query: 236 EWYNIVSWTHYAMVTAEELG-ITQKNINQ 263 E N ++ + + +K Q Sbjct: 217 ELLNKLNKALAEIKQDGSYDTLYKKWFEQ 245 >gi|292669508|ref|ZP_06602934.1| arginine ABC superfamily ATP binding cassette transporter, binding protein [Selenomonas noxia ATCC 43541] gi|292648871|gb|EFF66843.1| arginine ABC superfamily ATP binding cassette transporter, binding protein [Selenomonas noxia ATCC 43541] Length = 265 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 43/262 (16%), Positives = 84/262 (32%), Gaps = 21/262 (8%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCR 65 ++I + + T + G + F ++ GFD+D R Sbjct: 17 LTIFAVAVFGLAGCGTGEKT-----ASNVWRVGTDASYAPFGFQDEKSHEYVGFDIDIIR 71 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 A++ ++ LN ALQ+ +DI + R ++ Y Sbjct: 72 AIAET---QGHEVAIKNLNFDGLIPALQTGDLDIAISDMTINEERAKTVDFTDS--YYKA 126 Query: 126 GQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 G ++ + I+S L G I V G+T A F + + Sbjct: 127 GLSMVVRADETRINSFDDLEGLRIGVTIGSTGAEAARGIPNA-----DLHEFSTISDAFL 181 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 DA D + + + N ++P I++ L A+ +G+ E ++ Sbjct: 182 DLYNGGVDAVVND-TPVDEYYVENKGKGIAKVVPAQINQEDLGIAVKKGNAELLGQLN-- 238 Query: 245 HYAMVTAEELGITQKNINQVSK 266 + T +E G + + Sbjct: 239 -AGLKTIKENGKYAEIYRKWFG 259 >gi|261339174|ref|ZP_05967032.1| hypothetical protein ENTCAN_05398 [Enterobacter cancerogenus ATCC 35316] gi|288319019|gb|EFC57957.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Enterobacter cancerogenus ATCC 35316] gi|295096440|emb|CBK85530.1| L-arginine-binding protein [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 243 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 54/268 (20%), Positives = 95/268 (35%), Gaps = 30/268 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L + L T+ T ++ F + AN GFD Sbjct: 1 MKKVLIAALLASVSLSATAAQT-------------IRFATEASYPPFESIDANNKIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL I + + +L+ ++ID + D T RE + Sbjct: 48 VDLANALCKEIDATCT---FSNQAFDSLIPSLKFRRIDAVMAGMDITPEREKQVLFT--- 101 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+D + +K +SV L G + VQ GTT + + D + + + ++ + Sbjct: 102 TPYYDNSALFIGQKGKYASVDLLKGKKVGVQNGTTHQKFIMD----KHPEITTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR---PSEHVILPDIISKSPLAPAIIQGDTEW 237 + R DA GD + + ND+ + V D L A+ QG+TE Sbjct: 158 NAKLDLQNGRIDAVFGDTAVVTEWLKANDKLAAVGDKVTDKDYFGT-GLGIAVRQGNTEL 216 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVS 265 + A+ ++ G + + Sbjct: 217 QQKFN---AALEKVKKDGTYETIYKKWF 241 >gi|311280249|ref|YP_003942480.1| cationic amino acid ABC transporter, periplasmic binding protein [Enterobacter cloacae SCF1] gi|308749444|gb|ADO49196.1| cationic amino acid ABC transporter, periplasmic binding protein [Enterobacter cloacae SCF1] Length = 243 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 44/269 (16%), Positives = 87/269 (32%), Gaps = 32/269 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L + ++ + G++ F + A+ GFD Sbjct: 1 MKKVILAALLASFAVGASAAE-------------KINFGVSATYPPFESMDASNQIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + D + + +L+ K+ D + D T R + Sbjct: 48 IDLAKALCKQMQADCT---FTNHAFDSLIPSLKFKKYDAVISGMDITPERSKQVSFTD-- 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+ ++ KK S L G I ++ GTT + L D + + + ++ + Sbjct: 103 -PYYANSALVIAKKGEFKSFDDLKGKRIGMENGTTHQKYLQD----KHPEVKTVAYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + T P P + L A+ + Sbjct: 158 NAIIDLKNGRIDGVFGDTAVVNEWLKT--NPQLGTATPKVTDPQYFGTGLGIAVRPDNQA 215 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVS 265 ++ A+ G +K +Q Sbjct: 216 LLAQLNNALKAIKA---DGTYKKISDQWF 241 >gi|187932687|ref|YP_001885295.1| amino acid ABC transporter, substrate-binding protein [Clostridium botulinum B str. Eklund 17B] gi|187720840|gb|ACD22061.1| amino acid ABC transporter, substrate-binding protein [Clostridium botulinum B str. Eklund 17B] Length = 268 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 43/271 (15%), Positives = 95/271 (35%), Gaps = 13/271 (4%) Query: 1 MYKDF--FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K F + + C+ + + ++ + + G++ V +G+ G Sbjct: 2 MNKLFKKLLIVSCVATIGVNLVACKSNKQESASSKNEIIIGMDDTFVPMGFKDGSGETVG 61 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD +A+ + ++++ ++ + L + ID++ T R+ ++ Sbjct: 62 FDVDLAKAVGEKL---NKEVKFQSIDWSMKESELNNGNIDLIWNGYSITDERKENVEF-- 116 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD--YFKAHNMKYHPIVF 176 + + Q I I+S + L A + Q ++ + + + + F Sbjct: 117 SKVYLNNRQVIITLADSKINSKNDLINAKVGAQNQSSAVDAIKADSDMMSKFHGGNVVTF 176 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E + + R DA D L ++ IL D A I +GDT Sbjct: 177 ETNNDALIDLESGRIDAVVADE-ILAKYYTNERGKEKYKILNDDFGTEDYAVGIKKGDTS 235 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 + + +++ E G K + + Sbjct: 236 FVQEFNNALNSVI---EDGTGTKISEKWFGE 263 >gi|241889508|ref|ZP_04776807.1| arginine-binding extracellular protein ArtP [Gemella haemolysans ATCC 10379] gi|241863815|gb|EER68198.1| arginine-binding extracellular protein ArtP [Gemella haemolysans ATCC 10379] Length = 273 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 45/278 (16%), Positives = 105/278 (37%), Gaps = 23/278 (8%) Query: 1 MYKD--FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANGD 55 M K F SI+ ++IL S S + L ++K++ + G++ + + N Sbjct: 1 MKKLVLFITSIITVVILTACSSSNTKNKLQEVKEKNKIVLGVSPDYPPYEFLTTENGNKK 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G D+ ++ + +++ + AL + ++D++ + T R+ ++ Sbjct: 61 VVGADIYLAEQVAKKLG---VQVEIQQMAFDSLIAALNANKVDMVISGVNPTEERKKAVD 117 Query: 116 LAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + Y F+++K I SV+ L I VQ G+T E + K + Sbjct: 118 F--SDVYYTSKGIFVVNKDSEEIKSVADLKNKKIGVQKGSTYETYAKEQLK--MDDKNIQ 173 Query: 175 VFERVEEIDAAYRAHRCDAY-TGDISALYALKLTNDRPSEHVILPDIISKSP----LAPA 229 V + + + DA D A K+ ++ ++ I P +A Sbjct: 174 ALTDVPSLLQDLKNKKIDAVLIPDDVA----KIAMNKYTDIKISSFTADNDPEATGMAIV 229 Query: 230 IIQ-GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 + + ++ + + ++ +K +++ +K Sbjct: 230 FKKGKNDSNKELLEQVNAVIKEIQDQKAFEKELDKYAK 267 >gi|255655793|ref|ZP_05401202.1| amino acid ABC transporter, substrate-binding protein [Clostridium difficile QCD-23m63] gi|296450969|ref|ZP_06892716.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Clostridium difficile NAP08] gi|296879065|ref|ZP_06903061.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Clostridium difficile NAP07] gi|296260187|gb|EFH07035.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Clostridium difficile NAP08] gi|296429938|gb|EFH15789.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Clostridium difficile NAP07] Length = 267 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 39/238 (16%), Positives = 83/238 (34%), Gaps = 12/238 (5%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 + + G + V + G+ GFDVD + + ++++ P++ + Sbjct: 39 SKKEVVVGFDNTFVPMGFLDEKGNTVGFDVDLAKETFKRLG---MEVKFQPIDWSMKETE 95 Query: 92 LQ-SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150 L SK +D+L T R +++ + Q + I+S + L + Sbjct: 96 LNDSKTVDVLWNGYSITDER--KKIVSYTEPYLQNKQIIVTLSDSKINSKADLKDKEVGT 153 Query: 151 QAGTTTELTLA--DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 Q G+T + F P++++ ++ R A GD L + Sbjct: 154 QQGSTALDAVEKDKDFMNSLKGGAPVLYDTYDKALRDLEIGRTSAVVGDE-VLIRYYMGQ 212 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 ++ +L D A + + E ++ T M ++ G K ++ K Sbjct: 213 KGEDKYKVLKDDFGLEDYVVATSKENPELCEKINETLKEM---KKDGTFDKIYDKWFK 267 >gi|171779325|ref|ZP_02920289.1| hypothetical protein STRINF_01170 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281942|gb|EDT47373.1| hypothetical protein STRINF_01170 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 280 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 39/277 (14%), Positives = 85/277 (30%), Gaps = 18/277 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-------LGDIKKRGFLKCGINTGLVGFAEVKAN 53 + K ++ + + + +++S +K G + G + V + Sbjct: 3 LKKVLLSAMALVATVSLAACGSSSSKKVAKTDRWKTYQKDGKITIGFDNTFVPMGYEDED 62 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G GFD+D A+ K+++ +N + L + ID++ + R Sbjct: 63 GKNVGFDIDLANAVFEQYG---IKVKWQSINWDMKETELNNGTIDLIWNGYSISDERAEK 119 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY-- 171 + + Q + K GI+S + + + Q+G++ K Sbjct: 120 VLF--TNPYMVNEQVLVTKKSSGITSFAGMKDKVLGAQSGSSGYDAFNAKPKVLKDIVSG 177 Query: 172 -HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 +E + + +R D D + I+ A Sbjct: 178 GDATQYETFTQALVDLKNNRIDGLLIDKVYANYYLEQEGELDNYNIIASEFDGEDFAVGA 237 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 + D +V + A + G Q+ N+ D Sbjct: 238 RKAD---KTLVKKINQAFQKLYQEGKFQEISNKWFGD 271 >gi|317406131|gb|EFV86388.1| glutamine-binding periplasmic protein [Achromobacter xylosoxidans C54] Length = 247 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 47/236 (19%), Positives = 89/236 (37%), Gaps = 16/236 (6%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 ++ + V +G GFD++ AL++A+ K++++ ++ K ALQ+ Sbjct: 28 TIRAVTDATFPPMEFV-KDGKRTGFDIELVEALAAAMGK---KVEWIDIDFKGLIPALQA 83 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 + DI T R S + F Y G + K + ++ L G + VQ GT Sbjct: 84 GRADIAVSAIYITPER--SKVVDFTDPYYAGGLVVLTKKDGPVKTLKDLDGRKVSVQVGT 141 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 + +Y K H + E+ +E+ + R DA A KL ++ Sbjct: 142 KSV----NYLKEHYPSVQRVEVEKNQEMFNLVQIGRADAAVTGKP---AAKLFAQSTTDL 194 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 +L D I+ A+ + E ++ + G Q +N+ + Sbjct: 195 TVLADQITTEDYGIAVPKNKPELTRGLNEALQKIKA---DGSYQAIVNKWFEAPAK 247 >gi|301646298|ref|ZP_07246189.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 146-1] gi|331641381|ref|ZP_08342516.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli H736] gi|301075501|gb|EFK90307.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 146-1] gi|331038179|gb|EGI10399.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli H736] Length = 260 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 44/268 (16%), Positives = 92/268 (34%), Gaps = 30/268 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L ++ + G++ F + AN + GFD Sbjct: 18 MKKLVLAALLASFTFGASAAE-------------KINFGVSATYPPFESIGANNEIVGFD 64 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + + + + +L+ ++ D + D T R + Sbjct: 65 IDLAKALCKQMQAECT---FTNHAFDSLIPSLKFRKYDAVISGMDITPERSKQVSFT--- 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y++ ++ KK + + L G I ++ GTT + + D + + + ++ + Sbjct: 119 TPYYENSAVVIAKKDTYKTFADLKGKRIGMENGTTHQKYIQD----QHPEVKTVSYDSYQ 174 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR---PSEHVILPDIISKSPLAPAIIQGDTEW 237 + R D GD + + TN + +E V P L A+ + Sbjct: 175 NAFIDLKNGRIDGVFGDTAVVNEWLKTNPQLGVATEKVTDPQYFGT-GLGIAVRPDNKAL 233 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVS 265 ++ A+ G QK +Q Sbjct: 234 LEKLNNALAAIKA---DGTYQKISDQWF 258 >gi|240081469|ref|ZP_04726012.1| Histidine-binding protein precursor [Neisseria gonorrhoeae FA19] gi|268597570|ref|ZP_06131737.1| histidine-binding protein [Neisseria gonorrhoeae FA19] gi|268551358|gb|EEZ46377.1| histidine-binding protein [Neisseria gonorrhoeae FA19] Length = 268 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 48/237 (20%), Positives = 84/237 (35%), Gaps = 11/237 (4%) Query: 37 KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96 + N F + + G+ +GFDVD A++ A KI++ F AL + Sbjct: 40 RVASNAEFAPFESLDSKGNVEGFDVDLMNAMAKA---GNFKIEFKHQPWDSLFPALNNGD 96 Query: 97 IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTT 155 DI+ T R+ S+ + Q ++ K K +SS L + V G T Sbjct: 97 ADIVMSGVTITDDRKQSMDF--SDPYFEITQVVLVPKGKKVSSSDDLKKMNKVGVVTGYT 154 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS-EH 214 + +++ + N K FE V I D+ D + + N + Sbjct: 155 GDFSVSKLLGSDNPKI--ARFESVPLIIKELENGGLDSVVSDSAVIANYVKNNPAKGMDF 212 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSKDTTN 270 V LPD + A+ +GD +++ + + E I K + Sbjct: 213 VTLPD-FTTEHYGIAVRKGDEATVKMLNDALEKVRESGEYDKIYAKYFAKEGGQAAK 268 >gi|91777477|ref|YP_552685.1| polar amino acid ABC transporter periplasmic ligand-binding protein [Burkholderia xenovorans LB400] gi|91690137|gb|ABE33335.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia xenovorans LB400] Length = 282 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 55/269 (20%), Positives = 96/269 (35%), Gaps = 15/269 (5%) Query: 1 MYKDFFVSILCLIILFFTSF----STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K S++ + F + + NA L DIK RG + I+ + AN + Sbjct: 1 MSKRRLSSLVLAALFPFGALIHPLAANADTLDDIKSRGTMTVAIDPTFAPYEYTDANNNI 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFD A++ + KI+Y ++ L + D+ + T R L Sbjct: 61 VGFDPAVMDAVARHLG---VKIEYQRMSFSGIIPGLLAHSFDVEGSALNVTSERAKRLAY 117 Query: 117 AFRPITYFDGQGFIM--HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK---- 170 +G K +++ L+G + V++ + E L + + K Sbjct: 118 VVPTSKTVNGALVRSDFRKIPQPATIESLAGLTAAVKSASAPEQILKQFNETLKAKGLAP 177 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 I + V++ AA R D D++ L + P + ++ +A A Sbjct: 178 IQLISVDSVDQTVAALMTRRADFVFDDMTVLAGVIKQ--NPGKLKSTGELGPSQWIAWAT 235 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQK 259 DT +S AM + EL QK Sbjct: 236 RPDDTRLNKAISDQILAMKKSGELARLQK 264 >gi|167589680|ref|ZP_02382068.1| glutamine ABC transporter periplasmic protein [Burkholderia ubonensis Bu] Length = 250 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 47/267 (17%), Positives = 91/267 (34%), Gaps = 24/267 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + F+ ++ + S +A L G +T + F + + + GFD Sbjct: 1 MSRRSFLKTAVVVAMLGASV-AHADT-------KTLVVGTDTSFMPFEFKQGD-KYVGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D ++ K P++ ALQ++ ID+ R+ ++ Sbjct: 52 LDLWAEIAKD---QGWKYTIQPMDFAGLIPALQTQNIDVALSGMTIKEERKKAIDF--SA 106 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G ++ I S+ L+G I + GT T D+ KAH F + Sbjct: 107 PYYDSGLAAMVQTGNTTIKSIDDLNGKVIAAKTGTATI----DWIKAHLKPKEIRQFPNI 162 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 ++ A A R DA D + + N+ + + +S +G Sbjct: 163 DQAYLALEAGRVDAAMHDTPNVL-FFVNNEGKGKVKVAGQPVSGDKYGIGFPKGSP---- 217 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSK 266 +V+ + +V G + + Sbjct: 218 LVAKVNEGLVKIRADGRYAQIYRKWFG 244 >gi|317048165|ref|YP_004115813.1| family 3 extracellular solute-binding protein [Pantoea sp. At-9b] gi|316949782|gb|ADU69257.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b] Length = 242 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 46/225 (20%), Positives = 83/225 (36%), Gaps = 14/225 (6%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 ++ I+ ++ N GFDVD ALS + Y ++ K ++ + Sbjct: 23 IRVAIDPTFPPMEYIQ-NNQRTGFDVDLAAALSKQMGRPWV---YTDMDFKAMVPSVLAG 78 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGT 154 + DI+ T R+ + + G ++ K I + L+G + VQ GT Sbjct: 79 RQDIVLSAIYITDDRKKVVDF--TDPYFSAGLVVMVKKGDTRIKTPQDLAGKRVAVQVGT 136 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 + LAD F + + E+ EE+ + A R DA A L + Sbjct: 137 KSVKVLADQFPSAQS----VEVEKNEEMFNSLEAGRADAVVTGKP---AALLYSKTRGTT 189 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 ILP+ ++ A+ + + E ++ A+ QK Sbjct: 190 QILPEPLTHEEYGIAVSKREPELRQQLNDALKAIKADGTYDALQK 234 >gi|326384495|ref|ZP_08206175.1| extracellular solute-binding protein family 3 protein [Gordonia neofelifaecis NRRL B-59395] gi|326196840|gb|EGD54034.1| extracellular solute-binding protein family 3 protein [Gordonia neofelifaecis NRRL B-59395] Length = 337 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 37/242 (15%), Positives = 77/242 (31%), Gaps = 31/242 (12%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDV----DFCRALSSAIFDDPSKIQYLPLNAKE 87 K G + G G + +G GFD ++ + +I + + + Sbjct: 44 KSGKVVLGTKYDQPGLGLQQPDGSVVGFDPSVSEYVVDHIADKLGVPHPEITWRETPSAQ 103 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVSQL-SG 145 R + + ++D+++ R + A QG ++ ++S++ L +G Sbjct: 104 RETLIGNGEVDMIAATYSINEARAKKVSFA--GPYLVTYQGLLVRADDSTLNSLTDLNNG 161 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 +C +G+T + KA ++ A R + DA T D + L Sbjct: 162 KKLCSVSGSTPAQNV----KAQLPGVQLQEYDSYSSCVEALRRGKVDALTTDETILAGYA 217 Query: 206 LTNDRPSEHVIL-----------------PDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 N P E ++ S + Q + V+ +M Sbjct: 218 --NRYPGEFKLVSMTYPKDACVKGALKKQGQPFSTERYGIGMAQDYPDSVAAVNEAIESM 275 Query: 249 VT 250 + Sbjct: 276 LA 277 >gi|253990333|ref|YP_003041689.1| arginine-binding periplasmic protein 1 [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253781783|emb|CAQ84946.1| arginine-binding periplasmic protein 1 [Photorhabdus asymbiotica] Length = 244 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 55/262 (20%), Positives = 97/262 (37%), Gaps = 25/262 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F ++L + L T+ ++ F + AN +GFD Sbjct: 1 MKKLLFATLLGTVTLSATATEKE-----------TIRFATEATYPPFEFIDANNQIQGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + I + + + +L+ ++ D L+ D T R+ + Sbjct: 50 IDLANALCTKINATCT---FTNQSFDSLIPSLKFRRFDALAAGMDITPERQKQVDFTD-- 104 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 TY+D + K ISSV++L G + +Q GTT + L + K + ++ + Sbjct: 105 -TYYDNSAVFIAIKGKISSVAELKGKQVGIQNGTTHQKYLIEQQKE----IKTVPYDSYQ 159 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR---PSEHVILPDIISKSPLAPAIIQGDTEW 237 + R DA GD +A+ ND V P+ L A+ +G+ E Sbjct: 160 NAILDLKNGRLDAIFGDTAAINEWLKKNDNLETVGNKVTDPNYFGI-GLGFAVRKGNKEL 218 Query: 238 YNIVSWTHYAMVTAEELGITQK 259 N ++ + I K Sbjct: 219 QNKLNKALTDIKQDGTYAIIYK 240 >gi|224823796|ref|ZP_03696905.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum 2002] gi|224604251|gb|EEG10425.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum 2002] Length = 259 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 46/249 (18%), Positives = 82/249 (32%), Gaps = 18/249 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++L LI TS + A +L +++RG LK + F + GF+ Sbjct: 1 MKK--LIALLALI--GATSHAFAADLLDTVQQRGTLKIALEGTYPPFNFKDKDQKLAGFE 56 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL+ + P ++ LQ + D++ T R F Sbjct: 57 VDLGTALAQKLKVKP---EFTTGEWSGLLAGLQGGKFDVVMNQVSITDKR--KEVFDFSQ 111 Query: 121 ITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I+ K + S+ L G + V G+ AD KA + Sbjct: 112 PYTISSAQLIVRKNEKRVFKSLDDLKGLKMGVTQGS----NYADMVKAQG-GIESKFYPS 166 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 EI + R DA D + P + + + + +G+ ++ Sbjct: 167 AAEIFQDLASGRIDAAINDSLLIPFAIKEAKLP--LKAGAAVGTTTQMGIPFAKGNPKFK 224 Query: 239 NIVSWTHYA 247 + + Sbjct: 225 AAIDGALTS 233 >gi|295399081|ref|ZP_06809063.1| extracellular solute-binding protein family 3 [Geobacillus thermoglucosidasius C56-YS93] gi|312110315|ref|YP_003988631.1| extracellular solute-binding protein family 3 [Geobacillus sp. Y4.1MC1] gi|294978547|gb|EFG54143.1| extracellular solute-binding protein family 3 [Geobacillus thermoglucosidasius C56-YS93] gi|311215416|gb|ADP74020.1| extracellular solute-binding protein family 3 [Geobacillus sp. Y4.1MC1] Length = 260 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 45/235 (19%), Positives = 92/235 (39%), Gaps = 11/235 (4%) Query: 32 KRGFLKCGINTGLVGFAEVK-ANG-DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 ++ LK G + F + A G + GFDVD + ++ + + + + ++ Sbjct: 34 QKKVLKMGTSADYAPFEYIDTAKGNEIIGFDVDLAKMITKELGYE---FEIVDMDFNGLI 90 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 ALQS ++D + T R+ ++ + Y + K GI +V L G ++ Sbjct: 91 PALQSGKVDFVLAGMTPTKDRKKNVDF--SDVYYVSRNMIVSKKGSGIKTVKDLKGKTVG 148 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 VQ G+ E A + R+ E+ +A R DA + + T++ Sbjct: 149 VQTGSIQEEEAKKI--AKTVDMKLESRNRIPELIQEIQAGRFDAAIIEDTVAKGYLQTSN 206 Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQKNINQ 263 E +P ++ A A +G ++ + + + E+ + +K +Q Sbjct: 207 GKLEGHTIPTNEQEAGSAIAFPKG-SKLRDEFNKVLREKIENGEVDQLIKKWFDQ 260 >gi|255100911|ref|ZP_05329888.1| amino acid ABC transporter, substrate-binding protein [Clostridium difficile QCD-63q42] Length = 267 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 40/238 (16%), Positives = 83/238 (34%), Gaps = 12/238 (5%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 + + G + V + GD GFDVD + + ++++ P++ + Sbjct: 39 SKKEVVVGFDNTFVPMGFLDEKGDTVGFDVDLAKETFKRLG---MEVKFQPIDWSMKETE 95 Query: 92 LQ-SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150 L SK +D+L T R +++ + Q + I+S + L + Sbjct: 96 LNDSKTVDVLWNGYSITDER--KKIVSYTEPYLQNKQIIVTLSDSKINSKADLKDKEVGT 153 Query: 151 QAGTTTELTLA--DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 Q G+T + F P++++ ++ R A GD L + Sbjct: 154 QQGSTALDAVEKDKDFMNSLKGGAPVLYDTYDKALRDLEIGRTSAVVGDE-VLIRYYMGQ 212 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 ++ +L D A + + E ++ T M ++ G K ++ K Sbjct: 213 KGEDKYKVLKDDFGLEDYVVATSKENPELCEKINETLKEM---KKDGTFDKIYDKWFK 267 >gi|293605308|ref|ZP_06687694.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] gi|292816364|gb|EFF75459.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] Length = 278 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 52/255 (20%), Positives = 92/255 (36%), Gaps = 12/255 (4%) Query: 10 LCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRAL 67 + L T+ + +A L IK+RG + G+ F + A G++ + RAL Sbjct: 13 AVSLALALTASAVHADATLDKIKQRGTVTIGVLANGGVFGSLDPATQQLIGWNPELARAL 72 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + K + + + R L S ++D+L + + R LG A P + G Sbjct: 73 AEGLG---VKAELVQVQTATRTQFLISGKVDLLIASMELNPERAEILGYAPTP-FFRVGG 128 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 K GI + L G +CV G++ L+ + A Y + A R Sbjct: 129 AAATLKTSGIHTWEDLRGKPVCVSQGSSFARPLSTEYGAVVKGYK-----GASDSLLALR 183 Query: 188 AHRCDAYTGDISALYALKLTNDRP-SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 +C A D + + L N H + I + +G+ + V Sbjct: 184 GGQCVAAVHDSTLIQPLLRNNPEWAGYHAPIATEILPANSVVWTRKGEADTIAAVDKVVQ 243 Query: 247 AMVTAEELGITQKNI 261 + L T+K + Sbjct: 244 DWHRSGWLIATEKRL 258 >gi|126699383|ref|YP_001088280.1| amino acid ABC transporter substrate-binding protein [Clostridium difficile 630] gi|255306801|ref|ZP_05350972.1| amino acid ABC transporter, substrate-binding protein [Clostridium difficile ATCC 43255] gi|115250820|emb|CAJ68644.1| ABC-type transport system, aminoacid-family extracellular solute-binding protein [Clostridium difficile] Length = 267 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 40/238 (16%), Positives = 83/238 (34%), Gaps = 12/238 (5%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 + + G + V + GD GFDVD + + ++++ P++ + Sbjct: 39 SKKEVVVGFDNTFVPMGFLDEKGDTVGFDVDLAKETFKRLG---MEVKFQPIDWSMKETE 95 Query: 92 LQ-SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150 L SK +D+L T R +++ + Q + I+S + L + Sbjct: 96 LNDSKTVDVLWNGYSITDER--KKIVSYTEPYLQNKQIIVTLSDSKINSKADLKDKEVGT 153 Query: 151 QAGTTTELTLA--DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 Q G+T + F P++++ ++ R A GD L + Sbjct: 154 QQGSTALDAVEKDKDFMNSLKGGAPVLYDTYDKALRDLEIGRTSAVVGDE-VLIRYYMGQ 212 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 ++ +L D A + + E ++ T M ++ G K ++ K Sbjct: 213 KGEDKYKVLKDDFGLEDYVVATSKENPELCEKINETLKEM---KKDGTFDKIYDKWFK 267 >gi|330010081|ref|ZP_08306680.1| glutamine ABC transporter, periplasmic glutamine-binding protein GlnH [Klebsiella sp. MS 92-3] gi|328534632|gb|EGF61206.1| glutamine ABC transporter, periplasmic glutamine-binding protein GlnH [Klebsiella sp. MS 92-3] Length = 248 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 52/268 (19%), Positives = 90/268 (33%), Gaps = 24/268 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M F VS+ L + F S L +T V F + + + GFD Sbjct: 1 MKSVFKVSLAALTLAFAVSSYAANKTL---------VVATDTAFVPFEFKQGD-KYVGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A++ + D P++ ALQ+K ID+ T R+ ++ + Sbjct: 51 VDLWAAIAKELKLD---YTLKPMDFSGIIPALQTKNIDLALAGITITDERKKAIDFSDG- 106 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G +++ I V L+G + V++GT + DY KA+ F + Sbjct: 107 -YYKSGLLVMVNANNNDIKDVKDLNGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNI 161 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R DA D + T + + + + A +G E Sbjct: 162 DNAYMELGTGRADAVLHDTPNILYFIKTAGN-GKFKAVGESLEAQNYGIAFPKGSDELRE 220 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKD 267 V+ T + G + + Sbjct: 221 KVNGALK---TLRDNGTYNEIYKKWFGT 245 >gi|139439228|ref|ZP_01772670.1| Hypothetical protein COLAER_01684 [Collinsella aerofaciens ATCC 25986] gi|133775252|gb|EBA39072.1| Hypothetical protein COLAER_01684 [Collinsella aerofaciens ATCC 25986] Length = 286 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 40/228 (17%), Positives = 81/228 (35%), Gaps = 12/228 (5%) Query: 29 DIK---KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 D+K + L G + + V +G++ GFD+D +A++ +++Y ++ Sbjct: 45 DVKGAAESKKLVVGFDKSYPPYGFVGDDGEYTGFDLDLAKAVADK---QGWEVKYEAIDW 101 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 + L S I+ + RE + + Q ++ K GI L+G Sbjct: 102 DAKDTLLNSGAINCIWNGFTM-EGREDDYTFSE--PYMLNEQVLVVKKDAGIKGWDDLAG 158 Query: 146 ASICVQAGTTTELTLADYFKAHNMKY-HPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 ++ Q + + L K + + DA D+S A Sbjct: 159 KTVITQTDSAAQDVLEGDQKDLAATFATLDTIGEYNTAFMQLESGAVDAVACDLSI--AQ 216 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 +P + L + +S A +GDT+ + V+ + A+ Sbjct: 217 YQLAAKPDAYTQLDEPLSSEHYAVGFKKGDTKSADAVAESLKALYEDG 264 >gi|322616361|gb|EFY13270.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322619611|gb|EFY16486.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622693|gb|EFY19538.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628605|gb|EFY25392.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631542|gb|EFY28298.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322637069|gb|EFY33772.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641732|gb|EFY38368.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644475|gb|EFY41015.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650064|gb|EFY46481.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322654143|gb|EFY50466.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658058|gb|EFY54325.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322663532|gb|EFY59734.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322670268|gb|EFY66408.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322671504|gb|EFY67626.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676860|gb|EFY72927.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682785|gb|EFY78804.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686464|gb|EFY82446.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323196082|gb|EFZ81245.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323196772|gb|EFZ81916.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202949|gb|EFZ87983.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208989|gb|EFZ93926.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323211894|gb|EFZ96722.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323215174|gb|EFZ99919.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323222377|gb|EGA06755.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323229852|gb|EGA13975.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233077|gb|EGA17173.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240812|gb|EGA24854.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323243129|gb|EGA27149.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248671|gb|EGA32599.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251672|gb|EGA35539.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323257340|gb|EGA41038.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323261928|gb|EGA45494.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323267944|gb|EGA51423.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323271989|gb|EGA55404.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 243 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 43/267 (16%), Positives = 89/267 (33%), Gaps = 28/267 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L + + G++ F + A+ GFD Sbjct: 1 MKKLVLAALLASFATGSIAAE-------------KINFGVSATYPPFESLDASNKIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + + + + AL+ ++ D + D T R + + Sbjct: 48 IDLATALCKQMQAECT---FTNHAFDSLIPALKFRKYDAVISGMDITPERSKQVAFSN-- 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+ ++ KK + + L G I ++ GTT + L D + + + ++ + Sbjct: 103 -PYYANSALVIAKKDTYKTFTDLKGKRIGMENGTTHQKYLQD----KHPEVKTVAYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R D GD + + TN + P+ + + L A+ + Sbjct: 158 NAIIDLKNGRIDGVFGDTAVVNEWLKTNPQLGPATEKVTDPQYFGTGLGIAVRPDNKSLL 217 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVS 265 ++ A+ G QK +Q Sbjct: 218 EKLNNALAAIKA---DGTYQKISDQWF 241 >gi|294793181|ref|ZP_06758327.1| glutamine ABC transporter, glutamine-binding protein [Veillonella sp. 6_1_27] gi|294794789|ref|ZP_06759924.1| glutamine ABC transporter, glutamine-binding protein [Veillonella sp. 3_1_44] gi|294454151|gb|EFG22525.1| glutamine ABC transporter, glutamine-binding protein [Veillonella sp. 3_1_44] gi|294456126|gb|EFG24490.1| glutamine ABC transporter, glutamine-binding protein [Veillonella sp. 6_1_27] Length = 260 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 52/270 (19%), Positives = 101/270 (37%), Gaps = 22/270 (8%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K ++++ + + + N ++ G L+ G T F + + + GFDV Sbjct: 5 KKLTAIALVAIAAMGLLAGCGN-DKPKMTQQEGVLRVGSETTFPPFEFTEGD-KYVGFDV 62 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D A++ + K+++ + A+QS ID+++ + T RE +L + Sbjct: 63 DLSEAIAKKLG---LKMEFKSMGFDALIPAVQSGDIDMIAAGINATPEREKALDFSDV-- 117 Query: 122 TYFDGQGFIM---HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 YFD GFI I ++ +L+G ++ Q GT + Sbjct: 118 -YFDQGGFITVVRKDNTTIHNMDELAGKTVGAQIGTIPVE-----MAQKIPGTTVKQIDS 171 Query: 179 VEEIDAAYRAHRCDAYTGDIS-ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 I +A D D + A+Y LK D + ++ + + +G+ Sbjct: 172 NANIFMELKAGTIDGAIIDNAVAMYYLKQGAD--QDLKLVGEPTQSPGTVLGVKKGNKAL 229 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKD 267 V+ A+ +E G QK ++ D Sbjct: 230 QEAVN---KALKELKEDGTYQKIYDKWFGD 256 >gi|168069941|ref|XP_001786633.1| predicted protein [Physcomitrella patens subsp. patens] gi|162660828|gb|EDQ48553.1| predicted protein [Physcomitrella patens subsp. patens] Length = 542 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 47/283 (16%), Positives = 92/283 (32%), Gaps = 15/283 (5%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 L IK+ G ++ G F GF+VD A++ + P ++ Sbjct: 18 AQVRTLDQIKRSGEIRIGTEGAFPPFNYFDEKNQLTGFEVDLGNAIAQKLGLKPV---WI 74 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 + L + D + + T R ++ ++ G I+ KK G + Sbjct: 75 TQAFDSLLIQLNQGRFDFVIASHGITEERAKAVDFTN---PHYCTGGVIVSKKGGPKTAK 131 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L G + VQ GTT +++ + + R DA+ D + Sbjct: 132 DLQGKVVGVQIGTTYMEAAQKIPGIKQ----VRTYQKDPDALQDLLSGRLDAWITDR-FV 186 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 + + + L +++ LA A+ D +V + L + + Sbjct: 187 AKEAIKERKLENTLQLGELVGPERLAVAL---DARGLEVVVSGWQEAASLSALDLLGRWE 243 Query: 262 NQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMG 304 + DV+R G K ++ + + W +I G Sbjct: 244 AMGVRTVIYTDVRRD-GTLKGLDLEVVARVREAWPQELIAGGG 285 >gi|169831296|ref|YP_001717278.1| extracellular solute-binding protein [Candidatus Desulforudis audaxviator MP104C] gi|169638140|gb|ACA59646.1| extracellular solute-binding protein, family 3 [Candidatus Desulforudis audaxviator MP104C] Length = 268 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 47/269 (17%), Positives = 85/269 (31%), Gaps = 20/269 (7%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK--GF 59 K + L + + ++ L +T F G+ GF Sbjct: 6 KKVLALFFLVTFLFVVVGCGGGQTTPAPAPEKQKLTVASDTAYAPFEMQGGPGEPTYIGF 65 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D RA+ + + ++ + + ALQS +D T R + Sbjct: 66 DMDLIRAIGEVLGKE---VEIISMGFDGIIPALQSGSVDCAISAMTITEERAKVVNF--S 120 Query: 120 PITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y G + I L+G I VQ GTT L + A F Sbjct: 121 VPYYESGLITAVRADNNDIKGFEDLAGKKIAVQIGTTGALKAQEVPDA-----KISTFNT 175 Query: 179 VEEIDAAYRAHRCDAYTGDISA-LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 ++ + DA D LY ++ N+ + ++ D++S A+ +G + Sbjct: 176 IDLAFLELKKGAVDAVINDAPVTLYFIQQGNE---DVKVVGDLLSGEFYGIAVPKGKEDL 232 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSK 266 N ++ T +E G + Sbjct: 233 LNQINDALK---TLKENGTFDRIYMDWFG 258 >gi|148985652|ref|ZP_01818806.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP3-BS71] gi|147922133|gb|EDK73255.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP3-BS71] gi|301800260|emb|CBW32880.1| putative extracellular amino acid-binding protein [Streptococcus pneumoniae OXC141] Length = 271 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 44/276 (15%), Positives = 93/276 (33%), Gaps = 23/276 (8%) Query: 1 MYKDFFVSILCLIILFF------TSFSTNASILGDIKKRGFLKCGINTGLVGF---AEVK 51 M ++ +LC + F + + + S + IK++G L + F + V Sbjct: 1 MKSKKWIFVLCNFLASFFLVACQSGSNGSQSAVEAIKQKGKLVVATSPDYAPFEFQSLVD 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G D+D +A++ + K++ ++ +LQ+ + D+ T R Sbjct: 61 GKNQVVGADIDMAQAIADELG---VKLEISSMSFDNVLTSLQTGKADLAVAGISATDER- 116 Query: 112 ISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 F Y + F++ K ++ L A+I Q GT E + + Sbjct: 117 -KEVFDFSIPYYENKISFLVRKADVEKYKDLTNLKSANIAAQKGTVPESMVKEQLP---- 171 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 K + E +A + DA D + N + + + A A Sbjct: 172 KVQLTSLTNMGEAVNELQAGKIDAVHMDEPVALSYAAKNAGLAVATVSLKMKDGDANAVA 231 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 + + + +V ++ G Q + + + Sbjct: 232 LRKNSDDLKEVVDKVIQ---KLKDEGTYQSYLEKAA 264 >gi|204927139|ref|ZP_03218341.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204323804|gb|EDZ08999.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 246 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 42/264 (15%), Positives = 89/264 (33%), Gaps = 28/264 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V +L + + S S L G + + V A+ GFD Sbjct: 1 MKKKLIVMLLASLSVHAASVSAR-----------TLHFGTSATYAPYEFVDADNKIVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + + S + + L+ K+ D + D T RE + + Sbjct: 50 IDVANAVCKEMQAECS---FTNQSFDSLIPGLRFKKFDAVIAGMDMTPKREQQVSFSQ-- 104 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y ++ +K + + L G + ++ GTT + L D P+ ++ Sbjct: 105 PYYEGLSAVVVTRKGAYHTFADLKGKKVGLENGTTHQRYLQD----KQQAITPVAYDSYL 160 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235 + +R + GD + A+ ++ I+ + + A+ +G+ Sbjct: 161 NAFTDLKNNRLEGVFGD---VAAIGKWLKNNPDYAIMDERANDPDYYGKGLGIAVRKGND 217 Query: 236 EWYNIVSWTHYAMVTAEELGITQK 259 ++ + + E Q+ Sbjct: 218 ALLQEINAALDKVKASPEYAQMQE 241 >gi|163735168|ref|ZP_02142604.1| putative extracellular solute-binding protein [Roseobacter litoralis Och 149] gi|161391626|gb|EDQ15959.1| putative extracellular solute-binding protein [Roseobacter litoralis Och 149] Length = 276 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 52/285 (18%), Positives = 109/285 (38%), Gaps = 23/285 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK- 57 M + ++ + A S + ++ G L+ G+ +++ +G+W Sbjct: 2 MKRRTVLAAAIAATVMGAGTVAQAQDSTMAQVRDNGVLRVGVTQAPPWYSKDIISGEWTG 61 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G V +A++ + + + + + ALQ+ +ID++ D T R+ ++ Sbjct: 62 GLGVSMGKAMAETLGVE---FEPVEVTWGTAVAALQADRIDLMF-VLDATDARKEAVNFP 117 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIV 175 P+ Y+ + I+ + L+ S+ V T+ + L + +++ Sbjct: 118 ETPLLYYS-LAVLARDDLEITDWADLNSSDISVSVPQATSMDAFLTENAPNADIQ----R 172 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F E AA++A R DA T L A + S +I+P + P + A+ Q Sbjct: 173 FPGNAEAIAAFQAGRVDAVTLFHPPLIAARQKLG--SGQIIVPQPVESRPSSVAVRQETD 230 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKD-----TTNPDVQR 275 V+W + + + G TQ + D + P + R Sbjct: 231 P--AFVNWVNEQIDGYYKSGQTQVWYEEFLSDFGLDPSKVPAIIR 273 >gi|297531645|ref|YP_003672920.1| extracellular solute-binding protein family 3 [Geobacillus sp. C56-T3] gi|297254897|gb|ADI28343.1| extracellular solute-binding protein family 3 [Geobacillus sp. C56-T3] Length = 272 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 43/246 (17%), Positives = 74/246 (30%), Gaps = 16/246 (6%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 + + G + F + G GFDVD A+ D + + F + Sbjct: 40 AKKKIVVGTDAAFAPFEYMD-KGKIVGFDVDLLDAIMKEAGLD---YELRNIGWDPLFAS 95 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151 LQSK++D+ T R+ S + Q ++ + + + L G +I VQ Sbjct: 96 LQSKEVDMGISGITITDERKQSYDF--SDPYFEATQVILVKQGSPVKNALDLKGKTIGVQ 153 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 TT + F H FE DA D + N Sbjct: 154 NATTGQEAAEKLF---GKGPHIKKFETTVVAIMELLNGGVDAVITDNAVANEYVKNNPNK 210 Query: 212 SEHVIL-PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 VI P + + ++E V ++ + G + + Sbjct: 211 KLQVIEDPKNFASEYYGMIFPK-NSELKAKVDEALKNVINS---GKYTEIYKKWFG--KE 264 Query: 271 PDVQRF 276 P + R Sbjct: 265 PKLDRL 270 >gi|261400966|ref|ZP_05987091.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria lactamica ATCC 23970] gi|296313787|ref|ZP_06863728.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria polysaccharea ATCC 43768] gi|269209074|gb|EEZ75529.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria lactamica ATCC 23970] gi|296839609|gb|EFH23547.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria polysaccharea ATCC 43768] gi|309378375|emb|CBX23021.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 268 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 46/237 (19%), Positives = 83/237 (35%), Gaps = 11/237 (4%) Query: 37 KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96 + N F + + G+ +GFDVD A++ A KI++ F AL + Sbjct: 40 RVASNAEFAPFESLDSKGNVEGFDVDLMNAMAKA---GNFKIEFKHQPWDSLFPALNNGD 96 Query: 97 IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTT 155 D++ T R+ S+ + Q ++ K K +SS L + V G T Sbjct: 97 ADVVMSGVTITDDRKQSMDF--SDPYFEITQVVLVPKGKKVSSSEDLKKMNKVGVVTGYT 154 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS-EH 214 + +++ N FE V I D+ D + + N + Sbjct: 155 GDFSVSKLLG--NDNPKIARFENVPLIIKELENGGLDSVVSDSAVIANYVKNNPAKGMDF 212 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSKDTTN 270 V LPD + A+ +GD +++ + + E I K + + Sbjct: 213 VTLPD-FTTEHYGIAVRKGDEATVKMLNDALKKVRESGEYDKIYAKYFAKEGEQAAK 268 >gi|26246883|ref|NP_752923.1| arginine-binding periplasmic protein 2 [Escherichia coli CFT073] gi|117623040|ref|YP_851953.1| arginine-binding periplasmic protein 2 precursor [Escherichia coli APEC O1] gi|227884176|ref|ZP_04001981.1| arginine-binding periplasmic protein 2 precursor [Escherichia coli 83972] gi|237707176|ref|ZP_04537657.1| arginine-binding periplasmic protein 2 [Escherichia sp. 3_2_53FAA] gi|300817040|ref|ZP_07097259.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 107-1] gi|300824001|ref|ZP_07104123.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 119-7] gi|300901226|ref|ZP_07119328.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 198-1] gi|300921109|ref|ZP_07137493.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 115-1] gi|300924469|ref|ZP_07140439.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 182-1] gi|300929331|ref|ZP_07144804.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 187-1] gi|300935049|ref|ZP_07150081.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 21-1] gi|300991846|ref|ZP_07179671.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 200-1] gi|300993464|ref|ZP_07180406.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 45-1] gi|301020622|ref|ZP_07184697.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 69-1] gi|301051212|ref|ZP_07198041.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 185-1] gi|301325868|ref|ZP_07219301.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 78-1] gi|309795345|ref|ZP_07689763.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 145-7] gi|331646128|ref|ZP_08347231.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli M605] gi|331672399|ref|ZP_08373190.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli TA280] gi|26107283|gb|AAN79466.1|AE016758_70 Arginine-binding periplasmic protein 2 precursor [Escherichia coli CFT073] gi|115512164|gb|ABJ00239.1| arginine-binding periplasmic protein 2 precursor [Escherichia coli APEC O1] gi|226898386|gb|EEH84645.1| arginine-binding periplasmic protein 2 [Escherichia sp. 3_2_53FAA] gi|227838928|gb|EEJ49394.1| arginine-binding periplasmic protein 2 precursor [Escherichia coli 83972] gi|300297119|gb|EFJ53504.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 185-1] gi|300305456|gb|EFJ59976.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 200-1] gi|300355351|gb|EFJ71221.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 198-1] gi|300398598|gb|EFJ82136.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 69-1] gi|300406578|gb|EFJ90116.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 45-1] gi|300411960|gb|EFJ95270.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 115-1] gi|300419354|gb|EFK02665.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 182-1] gi|300459712|gb|EFK23205.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 21-1] gi|300462677|gb|EFK26170.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 187-1] gi|300523512|gb|EFK44581.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 119-7] gi|300530392|gb|EFK51454.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 107-1] gi|300847382|gb|EFK75142.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 78-1] gi|308120995|gb|EFO58257.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 145-7] gi|315287308|gb|EFU46719.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 110-3] gi|315292535|gb|EFU51887.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 153-1] gi|315299391|gb|EFU58643.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 16-3] gi|324009774|gb|EGB78993.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 57-2] gi|324013022|gb|EGB82241.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 60-1] gi|324015942|gb|EGB85161.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 117-3] gi|331044880|gb|EGI17007.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli M605] gi|331070594|gb|EGI41958.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli TA280] gi|332104598|gb|EGJ07944.1| arginine-binding periplasmic protein 2 [Shigella sp. D9] Length = 260 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 44/268 (16%), Positives = 92/268 (34%), Gaps = 30/268 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L ++ + G++ F + AN + GFD Sbjct: 18 MKKLVLAALLASFTFGASAAE-------------KINFGVSATYPPFESIGANNEIVGFD 64 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + + + + +L+ ++ D + D T R + Sbjct: 65 IDLAKALCKQMQAECT---FTNHAFDSLIPSLKFRKYDAVISGMDITPERSKQVSFT--- 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y++ ++ KK + + L G I ++ GTT + + D + + + ++ + Sbjct: 119 TPYYENSAVVIAKKDTYKTFADLKGKRIGMENGTTHQKYIQD----QHPEVKTVSYDSYQ 174 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR---PSEHVILPDIISKSPLAPAIIQGDTEW 237 + R D GD + + TN + +E V P L A+ + Sbjct: 175 NAFIDLKNGRIDGVFGDTAVVNEWLKTNPQLGVATEKVTDPQYFGT-GLGIAVRPDNKAL 233 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVS 265 ++ A+ G QK +Q Sbjct: 234 LEKLNNALAAIKA---DGTYQKINDQWF 258 >gi|191166156|ref|ZP_03027990.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli B7A] gi|190903765|gb|EDV63480.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli B7A] Length = 243 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 44/268 (16%), Positives = 92/268 (34%), Gaps = 30/268 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L ++ + G++ F + AN + GFD Sbjct: 1 MKKLVLAALLASFTFGASAAE-------------KINFGVSATYPPFESIGANNEIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + + + + +L+ ++ D + D T R + Sbjct: 48 IDLAKALCKQMQAECT---FTNHAFDSLIPSLKFRKYDAVISGMDITPERRKQVSFT--- 101 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y++ ++ KK + + L G I ++ GTT + + D + + + ++ + Sbjct: 102 TPYYENSAVVIAKKDTYKTFADLKGKRIGMENGTTHQKYIQD----QHPEVKTVSYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR---PSEHVILPDIISKSPLAPAIIQGDTEW 237 + R D GD + + TN + +E V P L A+ + Sbjct: 158 NAFIDLKNGRIDGVFGDTAVVNEWLKTNPQLGVATEKVTDPQYFGT-GLGIAVRPDNKAL 216 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVS 265 ++ A+ G QK +Q Sbjct: 217 LEKLNNALAAIKA---DGTYQKINDQWF 241 >gi|33592910|ref|NP_880554.1| putative glutamine-binding periplasmic protein precursor [Bordetella pertussis Tohama I] gi|33572558|emb|CAE42138.1| putative glutamine-binding periplasmic protein precursor [Bordetella pertussis Tohama I] Length = 247 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 45/236 (19%), Positives = 89/236 (37%), Gaps = 16/236 (6%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 ++ + V +G GFD++ AL+ A+ KI+++ ++ K ALQ+ Sbjct: 28 TIRAVTDATFPPMEFV-KDGKRTGFDIELVEALAQAMGK---KIEWIDIDFKGLIPALQA 83 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 + DI T R+ + Y G + K + S+ L G + VQ GT Sbjct: 84 GRADIAVSAIYITAERQKVVDF--TDPYYAGGLVVLTKKDGPVKSLKDLEGRKVSVQVGT 141 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 + L ++F K + E+ +E+ + R DA A KL Sbjct: 142 KSVNYLKEHFP----KVQRVEVEKNQEMFNLVQIGRADAAVTGKP---AAKLFAQSTQNL 194 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 +L + I+ A+ + + ++ A+ + G ++ +N+ + Sbjct: 195 AVLSEQITTEEYGIAVPKSKSGLTRELN---EALKKLKADGTYERIVNKWFEAQAK 247 >gi|222082457|ref|YP_002541822.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221727136|gb|ACM30225.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 275 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 52/278 (18%), Positives = 89/278 (32%), Gaps = 16/278 (5%) Query: 1 MYK-DFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + ++ LF + S +A L +K G LK G T F + A G+ G Sbjct: 1 MKRNSLLKGLVGAAFLFGATLSAHAADTLAAVKAAGTLKVGTETAFAPFDFIDA-GEHAG 59 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 +VD + + KI+++ L F AL++ + DI++ T R Sbjct: 60 LNVDLFAEIGKELG---VKIEWVALPWDGVFPALEAGKFDIVAGPATITKKRMERYRFT- 115 Query: 119 RPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + I+ K I+ ++G I V T+ L ++ K + Sbjct: 116 --PPIAEATIAILKKAGDTTINKPEDIAGKKIGVGKATSQLDQLKEFSDTLPTKAEIREY 173 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E A A R + + A + V+LP KS ++ Sbjct: 174 PAFTESYADLAAGRIAGVANSLPNI-AFVAKQREGTFEVVLPPFGKKSYFGFIGLKDADH 232 Query: 237 --WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272 + V + + QK PD Sbjct: 233 APLMDAVDAALLKIKADGRMATLQK--KWFGASFDTPD 268 >gi|113477911|ref|YP_723972.1| extracellular solute-binding protein [Trichodesmium erythraeum IMS101] gi|110168959|gb|ABG53499.1| extracellular solute-binding protein, family 3 [Trichodesmium erythraeum IMS101] Length = 286 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 46/286 (16%), Positives = 100/286 (34%), Gaps = 26/286 (9%) Query: 1 MYKDF---FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K S L + F ++A I +R + G+ F +G W Sbjct: 1 MNKKLKIIIASSLAFLAAIFPQKISHAQTQETIIRRELIVVGVRGDSPWFGFRN-DGKWT 59 Query: 58 GFDVDFCRALSSAIFD---DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G+ +D AL+ + DP +++ + + R+ + S ++D+ + RE Sbjct: 60 GYCIDIAYALADRLSANQLDPIRVRLVTSTTQSRWDLVTSGRVDLECGPNSISAEREAKH 119 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 G+ F + + K + V + A++ V TT E L + + Sbjct: 120 GINFSSPFFITATQILAKKGRQEEDVK-VGNATVGVVRNTTNESDLKSAYPLEKIDNK-- 176 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALY--ALKLTNDRPSEHVILPDIISKSP------- 225 + EE A + D + L A + D +++ + I++ Sbjct: 177 -YLSREEGVQAVMDGEVSGFASDGTLLLGSAEMMNLDIENDYTFI--TINQENGRPFCAG 233 Query: 226 LAPAII--QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 + + ++ W ++ A+ I +K + +S+++ Sbjct: 234 YGFILPGGEDNSSWQRYINDFLAHNKKAQR--IRKKWLGNLSENSQ 277 >gi|281177998|dbj|BAI54328.1| arginine ABC transporter substrate binding component [Escherichia coli SE15] Length = 243 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 50/269 (18%), Positives = 96/269 (35%), Gaps = 32/269 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ T ++ F + AN GFD Sbjct: 1 MKKVLIAALIAGFSLSATAAET-------------IRFATEASYPPFESIDANNQIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL I + + +L+ ++++ + D T RE + Sbjct: 48 VDLAQALCKEIDATCT---FSNQAFDSLIPSLKFRRVEAVMAGMDITPEREKQVLFT--- 101 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+D + ++ +SV QL G + VQ GTT + + D + + + ++ + Sbjct: 102 TPYYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFIMD----KHPEITTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D+ GD + + D P + + K L A+ QG+TE Sbjct: 158 NAKLDLQNGRIDSVFGDTAVVTEWLK--DNPKLAAVGDKVTDKDYFGTGLGIAVRQGNTE 215 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVS 265 + A+ ++ G + N+ Sbjct: 216 LQQKFN---TALEKVKKDGTYETIYNKWF 241 >gi|260566496|ref|ZP_05836966.1| extracellular solute-binding protein family 3 [Brucella suis bv. 4 str. 40] gi|261752264|ref|ZP_05995973.1| extracellular solute-binding protein family 3 [Brucella suis bv. 5 str. 513] gi|261754923|ref|ZP_05998632.1| extracellular solute-binding protein family 3 [Brucella suis bv. 3 str. 686] gi|260156014|gb|EEW91094.1| extracellular solute-binding protein family 3 [Brucella suis bv. 4 str. 40] gi|261742017|gb|EEY29943.1| extracellular solute-binding protein family 3 [Brucella suis bv. 5 str. 513] gi|261744676|gb|EEY32602.1| extracellular solute-binding protein family 3 [Brucella suis bv. 3 str. 686] Length = 265 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 52/260 (20%), Positives = 85/260 (32%), Gaps = 18/260 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + + + + S + + + K L G F +K +G GFD Sbjct: 1 MKRIAMATSVAALAITVGSMAAGVANAEEPLK---LTIGTEGAYPPFNFIKPDGTLSGFD 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD RAL + +K +++ + ALQS + D + T R+ + + Sbjct: 58 VDIARALCDQM---KAKCEFVTQDWDGAIPALQSGKFDAFIASMSITDERKKQVDFTNK- 113 Query: 121 ITYFDGQGFIMHKKKGISSV--SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y G K I V L+G +I VQ G+TT Y + + Sbjct: 114 -YYNTPPGIAAPKDTDIKGVTKEDLAGKTIGVQ-GSTTHAN---YSEKTYTDSTIKSYPT 168 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP----AIIQGD 234 EE R DA D L + D ++ P AI +G Sbjct: 169 AEEYRLDLANGRLDAVNDDSVTLAEWLKSPDGACCKMVGTFPPVTEIHGPGAGIAIKKGR 228 Query: 235 TEWYNIVSWTHYAMVTAEEL 254 E + A+ + Sbjct: 229 PELVAKFNAAIKAIRANGKY 248 >gi|325848924|ref|ZP_08170434.1| putative arginine ABC transporter, periplasmic arginine-binding protein ArtP [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325480568|gb|EGC83630.1| putative arginine ABC transporter, periplasmic arginine-binding protein ArtP [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 268 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 35/277 (12%), Positives = 86/277 (31%), Gaps = 26/277 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILG-------------DIKKRGFLKCGINTGLVGF 47 + K + +++ + + + +I G + G + + Sbjct: 4 LKKILLAFVTTTLLVSCSGKNQKGNSNESDLSNNSNKKVSSEIVSDGVIDLGTSADFPPY 63 Query: 48 AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 N G D + + + + + ++ ++ +++S ++D T Sbjct: 64 EFFDDNNKIVGIDAEIAQEIGKKLGVE---VKIKDMDFSSIIASIESGKLDGGIAG--IT 118 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 + + F Q I+ K + L G + Q G+T E D + Sbjct: 119 ANEDRKKNVNFSDTYGKSVQKVIVKKDSSFKNPEDLKGKKVASQLGSTGETAAKDTYGEE 178 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 N F + + A + DA D N + +L ++K A Sbjct: 179 N----VQSFSKNMDAIVALNNDKVDAVVLDDQVAEKFAAANK---DLKVLDKELAKDEYA 231 Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQ 263 A+ + + + V+ + + I +K +++ Sbjct: 232 IALDKKNDKLLEEVNKAIDELKKDGTIDKIFEKYMDK 268 >gi|157146480|ref|YP_001453799.1| hypothetical protein CKO_02240 [Citrobacter koseri ATCC BAA-895] gi|157083685|gb|ABV13363.1| hypothetical protein CKO_02240 [Citrobacter koseri ATCC BAA-895] Length = 245 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 48/267 (17%), Positives = 93/267 (34%), Gaps = 28/267 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ T ++ F + A+ GFD Sbjct: 3 MKKVLIAALIAGFSLSATAAQT-------------IRFATEASYPPFESMDASNKIVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL I + + +L+ ++ D + D T RE + Sbjct: 50 VDLANALCKEIDATCT---FTNQAFDSLIPSLKFRRFDAVMAGMDITPEREKQVLFT--- 103 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+D + ++ +S+ QL G + VQ GTT + + D + + + ++ + Sbjct: 104 TPYYDNSALFIGQQGKYTSIDQLKGKKVGVQNGTTHQKFIMD----KHPEITTVPYDSYQ 159 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R D GD + + N + P + + L A+ QG+TE Sbjct: 160 NAKLDLQNGRIDGVFGDTAVVTEWLKDNPKLAPVGDKVTDKDYFGTGLGIAVRQGNTELQ 219 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVS 265 + A+ ++ G + N+ Sbjct: 220 QKFN---TALEKVKQDGTYETIYNKWF 243 >gi|118586344|ref|ZP_01543796.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Oenococcus oeni ATCC BAA-1163] gi|118433235|gb|EAV39949.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Oenococcus oeni ATCC BAA-1163] Length = 282 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 34/223 (15%), Positives = 73/223 (32%), Gaps = 7/223 (3%) Query: 39 GINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQID 98 G++ + +G GFDVD A + K+++ P+N + L QID Sbjct: 54 GLDDTFIPMGFRNKSGKLIGFDVDLADATFKKLG---IKVEWEPINWSTKEQLLNDGQID 110 Query: 99 ILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTEL 158 + + R+ + + Q + K I+S + + G ++ +Q G+T + Sbjct: 111 AIWNGYTISAARKKKVAFSI--PYKKGTQVLVTLSKDKINSFADMKGKTLGLQNGSTAQT 168 Query: 159 TLADY--FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216 Y +K P ++ ++ +A R D ++ I Sbjct: 169 QFQQYKNLLKKYVKGTPQKYDTFDKAFMDLKAGRIQGILVDSMYAGYYVKHLSDSQDYKI 228 Query: 217 LPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 + + D + V+ ++ Q+ Sbjct: 229 IYGGYPTDENGVGFRKSDVKLREEVNTVLKKFQQNGKMKSLQE 271 >gi|299820599|ref|ZP_07052489.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Listeria grayi DSM 20601] gi|299818094|gb|EFI85328.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Listeria grayi DSM 20601] Length = 273 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 38/256 (14%), Positives = 83/256 (32%), Gaps = 12/256 (4%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 + IKK + G++ V GFDVD +A+ K+++ Sbjct: 24 AGSDRWTAIKKEKEIVVGLDDTFVPMGFRDKKDKIIGFDVDLAKAVFKEYG---IKVKFQ 80 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 P++ + L+++ ID++ R + + + Q + KK I S + Sbjct: 81 PIDWTLKETELKNESIDLIWNGYTVNKERAEKVAFSQ--PYMKNEQVLVTLKKNNIRSFA 138 Query: 142 QLSGASICVQAGTTTELTLA---DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + G + Q G + +A + P +++ + +R D D Sbjct: 139 GMKGKLLGAQNGASALDDMAKQPEVLTNIIKNKQPELYDSFNDAFIDLNNNRIDGLIIDN 198 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 + +++ I + A + + D V+ + ++ Sbjct: 199 VYARYIIAKQKNRADYRITTGGFKPADFAVGMRKTDKTLKKKVNQAFDKLYKEGKMQQIS 258 Query: 259 KNINQVSKD--TTNPD 272 K KD + P+ Sbjct: 259 K--KWFGKDEISKQPE 272 >gi|239616531|ref|YP_002939853.1| extracellular solute-binding protein family 3 [Kosmotoga olearia TBF 19.5.1] gi|239505362|gb|ACR78849.1| extracellular solute-binding protein family 3 [Kosmotoga olearia TBF 19.5.1] Length = 240 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 50/256 (19%), Positives = 89/256 (34%), Gaps = 25/256 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V +L + F G + F V NG++KGFD Sbjct: 1 MRKLSLVILLVALAAFAFG--------------KTYVVGTSADFPPFEYV-ENGEFKGFD 45 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D RA++ + + I+ + ++ AL S +DI+ T RE + Sbjct: 46 MDLIRAIADEMGFN---IKIVDMSFDSLIAALVSGNLDIVIAGMTITAEREAVVDF--SK 100 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF-KAHNMKYHPIVFERV 179 + Q I+ + + I VQ GTT +L + + K + ++ Sbjct: 101 PYWTADQSIIVKEDSDYTVTVLFGKHDIGVQTGTTGDLWVEENLVKTKILTGKFKRYDTF 160 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 DA D A + RP I+ I++ A+ +G+ E N Sbjct: 161 VLALTDLINGNVDAIVLDSPV--AERFAETRP--VKIVGIIVTGEEYGIAVREGNKELLN 216 Query: 240 IVSWTHYAMVTAEELG 255 +++ + +LG Sbjct: 217 LINEGIQRLKENGKLG 232 >gi|16759797|ref|NP_455414.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16764248|ref|NP_459863.1| arginine transport system component [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29142430|ref|NP_805772.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56414023|ref|YP_151098.1| arginine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62179449|ref|YP_215866.1| arginine ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161614848|ref|YP_001588813.1| hypothetical protein SPAB_02601 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167550405|ref|ZP_02344162.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167992140|ref|ZP_02573238.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168230794|ref|ZP_02655852.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168236832|ref|ZP_02661890.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168240768|ref|ZP_02665700.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168263593|ref|ZP_02685566.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168466505|ref|ZP_02700367.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168819949|ref|ZP_02831949.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194446347|ref|YP_002040125.1| arginine ABC transporter periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194450634|ref|YP_002044917.1| arginine ABC transporter periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194468477|ref|ZP_03074461.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194737012|ref|YP_002113980.1| arginine ABC transporter periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197250634|ref|YP_002145840.1| arginine ABC transporter periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197263320|ref|ZP_03163394.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197362946|ref|YP_002142583.1| arginine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198243138|ref|YP_002214851.1| arginine ABC transporter periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200391119|ref|ZP_03217730.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204929898|ref|ZP_03220919.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|207856319|ref|YP_002242970.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213052503|ref|ZP_03345381.1| arginine-binding periplasmic protein 2 precursor [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213417552|ref|ZP_03350694.1| arginine-binding periplasmic protein 2 precursor [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213428042|ref|ZP_03360792.1| arginine-binding periplasmic protein 2 precursor [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213580630|ref|ZP_03362456.1| arginine-binding periplasmic protein 2 precursor [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213647861|ref|ZP_03377914.1| arginine-binding periplasmic protein 2 precursor [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|224582737|ref|YP_002636535.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238913404|ref|ZP_04657241.1| arginine-binding periplasmic protein 2 precursor [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289825018|ref|ZP_06544381.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25296352|pir||AD0607 arginine-binding periplasmic protein 2 precursor [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16419395|gb|AAL19822.1| arginine 3rd transport system [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16502090|emb|CAD05326.1| arginine-binding periplasmic protein 2 precursor [Salmonella enterica subsp. enterica serovar Typhi] gi|29138060|gb|AAO69621.1| arginine-binding periplasmic protein 2 precursor [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56128280|gb|AAV77786.1| arginine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62127082|gb|AAX64785.1| ABC superfamily (bind_prot), arginine 3rd transport system [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161364212|gb|ABX67980.1| hypothetical protein SPAB_02601 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194405010|gb|ACF65232.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194408938|gb|ACF69157.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194454841|gb|EDX43680.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194712514|gb|ACF91735.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195631092|gb|EDX49678.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197094423|emb|CAR59939.1| arginine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197214337|gb|ACH51734.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197241575|gb|EDY24195.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197290083|gb|EDY29440.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197937654|gb|ACH74987.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199603564|gb|EDZ02110.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204320892|gb|EDZ06093.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205324560|gb|EDZ12399.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205329626|gb|EDZ16390.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205334795|gb|EDZ21559.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205340189|gb|EDZ26953.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205343014|gb|EDZ29778.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205347767|gb|EDZ34398.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206708122|emb|CAR32415.1| arginine-binding periplasmic protein 2 precursor [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224467264|gb|ACN45094.1| arginine-binding periplasmic protein 2 precursor [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261246142|emb|CBG23945.1| arginine-binding periplasmic protein 2 precursor [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267992649|gb|ACY87534.1| arginine transport system component [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157469|emb|CBW16959.1| arginine-binding periplasmic protein 2 precursor [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312911914|dbj|BAJ35888.1| arginine ABC transporter substrate binding protein ArtJ [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320085161|emb|CBY94948.1| Arginine-binding periplasmic protein 1 Flags: Precursor [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321223248|gb|EFX48317.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322713918|gb|EFZ05489.1| arginine-binding periplasmic protein 2 precursor [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323129191|gb|ADX16621.1| arginine-binding periplasmic protein 2 precursor [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|326622604|gb|EGE28949.1| arginine-binding periplasmic protein 2 precursor [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326627179|gb|EGE33522.1| arginine-binding periplasmic protein 2 precursor [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 243 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 43/267 (16%), Positives = 89/267 (33%), Gaps = 28/267 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L + + G++ F + A+ GFD Sbjct: 1 MKKLVLAALLASFATGSIAAE-------------KINFGVSATYPPFESLDASNKIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + + + + AL+ ++ D + D T R + + Sbjct: 48 IDLATALCKQMQAECT---FTNHAFDSLIPALKFRKYDAVISGMDITPERSKQVAFSN-- 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+ ++ KK + + L G I ++ GTT + L D + + + ++ + Sbjct: 103 -PYYANSALVIAKKDTYKTFTDLKGKRIGMENGTTHQKYLQD----KHPEVKTVAYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R D GD + + TN + P+ + + L A+ + Sbjct: 158 NAIIDLKNGRIDGVFGDTAVVNEWLKTNPQLGPATEKVTDPQYFGTGLGIAVRPDNKALL 217 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVS 265 ++ A+ G QK +Q Sbjct: 218 EKLNNALAAIKA---DGTYQKISDQWF 241 >gi|241766693|ref|ZP_04764534.1| extracellular solute-binding protein family 3 [Acidovorax delafieldii 2AN] gi|241362976|gb|EER58661.1| extracellular solute-binding protein family 3 [Acidovorax delafieldii 2AN] Length = 265 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 43/248 (17%), Positives = 86/248 (34%), Gaps = 12/248 (4%) Query: 13 IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72 I L + + L ++ +G + GI T + + + G DV + ++ + Sbjct: 17 ITLPLGASAQQDGSLKAVQDKGSISLGIPTDYPPYGFMGPDFKPTGVDVAVAQLIADKLG 76 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 K +P++ R LQS++ID++ R+ + + +F Q Sbjct: 77 ---VKADLVPVSTPNRIPYLQSRKIDVIVSALGKNEERQKVIDFSVSYAPFF--QAVFGP 131 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 K + S + L+ ++ V GT + L FE AA+ + Sbjct: 132 KNVEVKSFADLADKTLAVTRGTIQDDALQGLAPK---SLKIQRFEDDNATMAAFMTQQTQ 188 Query: 193 AYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 + A N + +E+ +L I SP + +G+T N ++ Sbjct: 189 FVAVGAAVAAAALQKNPKVQAEYKLL---IKDSPNYAGVRKGETALLNKINDILRTAKKD 245 Query: 252 EELGITQK 259 L + Sbjct: 246 GTLESYSQ 253 >gi|59801519|ref|YP_208231.1| ABC transporter, periplasmic histidine-binding protein precursor [Neisseria gonorrhoeae FA 1090] gi|194099507|ref|YP_002002631.1| Histidine-binding protein precursor [Neisseria gonorrhoeae NCCP11945] gi|240014879|ref|ZP_04721792.1| Histidine-binding protein precursor [Neisseria gonorrhoeae DGI18] gi|240017328|ref|ZP_04723868.1| Histidine-binding protein precursor [Neisseria gonorrhoeae FA6140] gi|240113751|ref|ZP_04728241.1| Histidine-binding protein precursor [Neisseria gonorrhoeae MS11] gi|240116484|ref|ZP_04730546.1| Histidine-binding protein precursor [Neisseria gonorrhoeae PID18] gi|240118700|ref|ZP_04732762.1| Histidine-binding protein precursor [Neisseria gonorrhoeae PID1] gi|240120946|ref|ZP_04733908.1| Histidine-binding protein precursor [Neisseria gonorrhoeae PID24-1] gi|240124247|ref|ZP_04737203.1| Histidine-binding protein precursor [Neisseria gonorrhoeae PID332] gi|254494502|ref|ZP_05107673.1| amino acid ABC transporter [Neisseria gonorrhoeae 1291] gi|260439765|ref|ZP_05793581.1| Histidine-binding protein precursor [Neisseria gonorrhoeae DGI2] gi|268599821|ref|ZP_06133988.1| amino acid ABC transporter [Neisseria gonorrhoeae MS11] gi|268602156|ref|ZP_06136323.1| amino acid ABC transporter [Neisseria gonorrhoeae PID18] gi|268604416|ref|ZP_06138583.1| amino acid ABC transporter [Neisseria gonorrhoeae PID1] gi|268682877|ref|ZP_06149739.1| amino acid ABC transporter [Neisseria gonorrhoeae PID332] gi|291043021|ref|ZP_06568756.1| histidine-binding protein [Neisseria gonorrhoeae DGI2] gi|59718414|gb|AAW89819.1| ABC transporter, periplasmic histidine-binding protein precursor [Neisseria gonorrhoeae FA 1090] gi|193934797|gb|ACF30621.1| Histidine-binding protein precursor [Neisseria gonorrhoeae NCCP11945] gi|226513542|gb|EEH62887.1| amino acid ABC transporter [Neisseria gonorrhoeae 1291] gi|268583952|gb|EEZ48628.1| amino acid ABC transporter [Neisseria gonorrhoeae MS11] gi|268586287|gb|EEZ50963.1| amino acid ABC transporter [Neisseria gonorrhoeae PID18] gi|268588547|gb|EEZ53223.1| amino acid ABC transporter [Neisseria gonorrhoeae PID1] gi|268623161|gb|EEZ55561.1| amino acid ABC transporter [Neisseria gonorrhoeae PID332] gi|291013061|gb|EFE05032.1| histidine-binding protein [Neisseria gonorrhoeae DGI2] Length = 268 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 46/237 (19%), Positives = 82/237 (34%), Gaps = 11/237 (4%) Query: 37 KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96 + N F + + G+ +GFDVD A++ A KI++ F AL + Sbjct: 40 RVASNAEFAPFESLDSKGNVEGFDVDLMNAMAKA---GNFKIEFKHQPWDSLFPALNNGD 96 Query: 97 IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTT 155 D++ T R+ S+ + Q ++ K K +SS L + V G T Sbjct: 97 ADVVMSGVTITDDRKQSMDF--SDPYFEITQVVLVPKGKKVSSSEDLKKMNKVGVVTGHT 154 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS-EH 214 + +++ N FE V I D+ D + + N + Sbjct: 155 GDFSVSKLLG--NDNPKIARFENVPLIIKELENGGLDSVVSDSAVIANYVKNNPAKGMDF 212 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSKDTTN 270 V LPD + A+ +GD +++ + + E I K + Sbjct: 213 VTLPD-FTTEHYGIAVRKGDEATVKMLNDALEKVRESGEYDKIYAKYFAKEGGQAAK 268 >gi|148993047|ref|ZP_01822641.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP9-BS68] gi|168489558|ref|ZP_02713757.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP195] gi|147928248|gb|EDK79265.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP9-BS68] gi|183572012|gb|EDT92540.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP195] gi|332073701|gb|EGI84180.1| bacterial extracellular solute-binding s, 3 family protein [Streptococcus pneumoniae GA17570] Length = 271 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 44/276 (15%), Positives = 93/276 (33%), Gaps = 23/276 (8%) Query: 1 MYKDFFVSILCLIILFF------TSFSTNASILGDIKKRGFLKCGINTGLVGF---AEVK 51 M ++ +LC + F + + + S + IK++G L + F + V Sbjct: 1 MKSKKWIFVLCNFLASFFLVACQSGSNGSQSAVDAIKQKGKLVVATSPDYAPFEFQSLVD 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G D+D +A++ + K++ L ++ +LQ+ + D+ T R Sbjct: 61 GKNQVVGADIDMAQAIADELG---VKLEILSMSFDNVLTSLQTGKADLAVAGISATDER- 116 Query: 112 ISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 F Y + F++ K ++ L A+I Q GT E + + Sbjct: 117 -KEVFDFSIPYYENKISFLVRKADVEKYKDLTSLESANIAAQKGTVPESMVKEQLPKAQ- 174 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + E +A + DA D + N + + + A A Sbjct: 175 ---LTSLTNMGEAVNELQAGKIDAVHMDEPVALSYAAKNAGLAVATVSLKMKDGDANAVA 231 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 + + + +V ++ G Q + + + Sbjct: 232 LRKNSDDLKEVVDKVIQ---KLKDEGTYQSYLEKAA 264 >gi|307150366|ref|YP_003885750.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7822] gi|306980594|gb|ADN12475.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7822] Length = 307 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 38/234 (16%), Positives = 88/234 (37%), Gaps = 12/234 (5%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK--- 77 + S+L +I+K G L+ + V F + + G +D + I ++ +K Sbjct: 44 AQETSVLDNIQKTGLLRVAMREDAVPFGYKDLDNNLNGICLDVINLIRQQIQEELNKQII 103 Query: 78 -IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-- 134 ++ RF ++ +D+ T+ + L +AF + G FI+ Sbjct: 104 TVKLFQSTLYNRFDLVKDGLVDLECGP--NTIRQASDLAIAFSDPFFITGTQFIIKTDQE 161 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 ++ L+ ++ V TTT+ + + + ++ + R+ A ++ + DA+ Sbjct: 162 NKFNTDGSLADLTLGVLRNTTTQEFIRNRYPQAKIQVFQGITGRLR-GIQAVQSGKIDAF 220 Query: 195 TGDISALYALKL--TNDRPSEHVILPD-IISKSPLAPAIIQGDTEWYNIVSWTH 245 D L P ++ ++P + + + D W +V+ Sbjct: 221 ASDGILLLGEATLQGLSIPEQYQLVPQRPLDCQYYGLILPKNDPRWRELVNSVI 274 >gi|16128828|ref|NP_415381.1| arginine binding protein, periplasmic [Escherichia coli str. K-12 substr. MG1655] gi|89107711|ref|AP_001491.1| arginine transporter subunit [Escherichia coli str. K-12 substr. W3110] gi|170080519|ref|YP_001729839.1| arginine ABC transporter periplasmic-binding protein [Escherichia coli str. K-12 substr. DH10B] gi|238900119|ref|YP_002925915.1| arginine transporter subunit [Escherichia coli BW2952] gi|256023513|ref|ZP_05437378.1| arginine transporter subunit [Escherichia sp. 4_1_40B] gi|301027627|ref|ZP_07190947.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 196-1] gi|307137488|ref|ZP_07496844.1| arginine transporter subunit [Escherichia coli H736] gi|2507363|sp|P30860|ARTJ_ECOLI RecName: Full=ABC transporter arginine-binding protein 1; Flags: Precursor gi|1651393|dbj|BAA35574.1| arginine transporter subunit [Escherichia coli str. K12 substr. W3110] gi|1787085|gb|AAC73947.1| arginine binding protein, periplasmic [Escherichia coli str. K-12 substr. MG1655] gi|169888354|gb|ACB02061.1| arginine transporter subunit; periplasmic-binding component of ABC superfamily [Escherichia coli str. K-12 substr. DH10B] gi|238860006|gb|ACR62004.1| arginine transporter subunit [Escherichia coli BW2952] gi|260449993|gb|ACX40415.1| cationic amino acid ABC transporter, periplasmic binding protein [Escherichia coli DH1] gi|299879229|gb|EFI87440.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 196-1] gi|309701138|emb|CBJ00436.1| arginine ABC transporter, substrate-binding protein [Escherichia coli ETEC H10407] gi|315135509|dbj|BAJ42668.1| arginine transporter subunit [Escherichia coli DH1] gi|315619867|gb|EFV00386.1| arginine-binding periplasmic protein 2 [Escherichia coli 3431] gi|323937967|gb|EGB34229.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli E1520] gi|323969576|gb|EGB64864.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli TA007] Length = 243 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 44/268 (16%), Positives = 92/268 (34%), Gaps = 30/268 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L ++ + G++ F + AN + GFD Sbjct: 1 MKKLVLAALLASFTFGASAAE-------------KINFGVSATYPPFESIGANNEIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + + + + +L+ ++ D + D T R + Sbjct: 48 IDLAKALCKQMQAECT---FTNHAFDSLIPSLKFRKYDAVISGMDITPERSKQVSFT--- 101 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y++ ++ KK + + L G I ++ GTT + + D + + + ++ + Sbjct: 102 TPYYENSAVVIAKKDTYKTFADLKGKRIGMENGTTHQKYIQD----QHPEVKTVSYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR---PSEHVILPDIISKSPLAPAIIQGDTEW 237 + R D GD + + TN + +E V P L A+ + Sbjct: 158 NAFIDLKNGRIDGVFGDTAVVNEWLKTNPQLGVATEKVTDPQYFGT-GLGIAVRPDNKAL 216 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVS 265 ++ A+ G QK +Q Sbjct: 217 LEKLNNALAAIKA---DGTYQKISDQWF 241 >gi|253578612|ref|ZP_04855884.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251850930|gb|EES78888.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 280 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 39/233 (16%), Positives = 73/233 (31%), Gaps = 9/233 (3%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 L G + F NG++ GFD+D + + + + K P+N + + Sbjct: 12 DSKTLTVGFDAQYPPFGYKDDNGEYVGFDLDLAQEVCDNLGWELVK---KPINWDSKDME 68 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151 L S ID + + + Q ++ GI + L+G ++ VQ Sbjct: 69 LNSGSIDCIWNGFTIN---GREDDYTWSNPYLNNEQVMVVAADSGIEKLDDLAGKNVVVQ 125 Query: 152 AGTTTELTLA--DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 A + L D + DA D + +L+ Sbjct: 126 AASAALDALNSDDNKDLTASFASLTENPDYNTAFMNLDSGAADAIAVD-IGVAKYQLSQR 184 Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 ++VIL + I +G+ E + V + A E+ + Sbjct: 185 EEGKYVILDEPIQSEEYGIGFKKGNDELKDTVWEEVLKLYDAGEVDKLAEKYE 237 >gi|170743614|ref|YP_001772269.1| extracellular solute-binding protein [Methylobacterium sp. 4-46] gi|168197888|gb|ACA19835.1| extracellular solute-binding protein family 3 [Methylobacterium sp. 4-46] Length = 281 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 44/256 (17%), Positives = 96/256 (37%), Gaps = 13/256 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M V+ + L +S L +I RG ++ G+ ++ +G +G + Sbjct: 7 MRTIVVVAAVLGGGLVASSAGAAEGRLKEILDRGVVRVGVQGAFKPWSFPAPDGTLQGIE 66 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ ++++ + K++ + + + R LQ +ID++ R +G+ Sbjct: 67 VELAKSVADTLG---VKLEPVIITSANRIQYLQQGKIDLILGGMYDASDRRKIIGMIE-- 121 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+ ++ KK I ++ +C + G + A+ I F Sbjct: 122 PAYWSSGPTLLAKKGAIKDWKDIANKPVCGKQGNYYNKQVQTELHAN-----LIAFAGNT 176 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII--QGDTEWY 238 E RA +C A+ D ++ A + + +P ++ +P A A+ + D W Sbjct: 177 EGKEGLRAGKCVAWLYDDVSIMADLALPEWEGYEMPVP-VLYNNPWAAAVPLDERDKAWG 235 Query: 239 NIVSWTHYAMVTAEEL 254 ++ Y +L Sbjct: 236 AFMAGMAYRWQADGKL 251 >gi|294794911|ref|ZP_06760046.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Veillonella sp. 3_1_44] gi|294454273|gb|EFG22647.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Veillonella sp. 3_1_44] Length = 270 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 43/271 (15%), Positives = 88/271 (32%), Gaps = 13/271 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K V + + ++ F + + + + + G++ G+ G D+ Sbjct: 4 KKMMAVGLAAVSMMAFVTGCGGDAKKANTELPKKIVIGLDDSFPPMGFKDDKGEIVGLDI 63 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D + + D +++ ++ + L+SK+ID L + RE ++ Sbjct: 64 DMAKEAAKRAGMD---VEFKAIDWSSKEAELKSKKIDALWNGLTVSPEREKNILF--SNT 118 Query: 122 TYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 D Q I+ I + L+G + VQ +T E L + +K + Sbjct: 119 YMKDKQYIIVRNDDDSIKGKADLAGKVVGVQQASTGEAALQNDPSGKTVK-ETKSYADFV 177 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL-PDIISKSPLAPAIIQGDTEWYN 239 R DA D A L P ++ I+ A + DT + Sbjct: 178 SAFMDLGIGRVDAVIADGVI--ARYLMTKEPGKYKIVEGTDYGVDNFAVGFRKDDTALRD 235 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 ++ M ++ G K + + Sbjct: 236 KINGILAEM---KKDGTADKIAEKWLGSGAD 263 >gi|30062342|ref|NP_836513.1| arginine 3rd transport system periplasmic binding protein [Shigella flexneri 2a str. 2457T] gi|56479746|ref|NP_706740.2| arginine 3rd transport system periplasmic binding protein [Shigella flexneri 2a str. 301] gi|30040587|gb|AAP16319.1| arginine 3rd transport system periplasmic binding protein [Shigella flexneri 2a str. 2457T] gi|56383297|gb|AAN42447.2| arginine 3rd transport system periplasmic binding protein [Shigella flexneri 2a str. 301] gi|281600183|gb|ADA73167.1| Arginine 3rd transport system periplasmic binding protein [Shigella flexneri 2002017] gi|313650233|gb|EFS14645.1| arginine-binding periplasmic protein 2 [Shigella flexneri 2a str. 2457T] Length = 243 Score = 129 bits (324), Expect = 8e-28, Method: Composition-based stats. Identities = 44/268 (16%), Positives = 92/268 (34%), Gaps = 30/268 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L ++ + G++ F + AN + GFD Sbjct: 1 MKKLVLAALLASFTFGASAAE-------------KINFGVSATYPPFESIGANNEIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + + + + +L+ ++ D + D T R + Sbjct: 48 IDLAKALCKQMQAECT---FTNHAFDSLIPSLKFRKYDAVISGMDITPERSKQVSFT--- 101 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y++ ++ KK + + L G I ++ GTT + + D + + + ++ + Sbjct: 102 TPYYENSAVVISKKDTYKTFADLKGKRIGMENGTTHQKYIQD----QHPEVKTVSYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR---PSEHVILPDIISKSPLAPAIIQGDTEW 237 + R D GD + + TN + +E V P L A+ + Sbjct: 158 NAFIDLKNGRIDGVFGDTAVVNEWLKTNPQLGVATEKVTDPQYFGT-GLGIAVRPDNKAL 216 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVS 265 ++ A+ G QK +Q Sbjct: 217 LEKLNNALAAIKA---DGTYQKINDQWF 241 >gi|324112238|gb|EGC06216.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia fergusonii B253] Length = 246 Score = 129 bits (324), Expect = 8e-28, Method: Composition-based stats. Identities = 47/265 (17%), Positives = 98/265 (36%), Gaps = 30/265 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + V +L L F + + N L G + + V A+ GFD Sbjct: 1 MKQKLLVMLLA--GLSFQATAANTKTL---------HFGTSATYAPYEFVDADNQIVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +A+ + ++ Q+ + L+ K+ D + D T RE + + Sbjct: 50 IDVAKAVCKEM---QAECQFTNQSFDSLIPGLRFKKFDAVIAGMDMTAKREQQVSFSQ-- 104 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y ++ +K +S ++L G I ++ GTT + L D + + ++ Sbjct: 105 PYYEGLSAVVVTRKGAYNSFAELKGKKIGLENGTTHQRYLQD----KQKEITAVAYDSYL 160 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP------LAPAIIQGD 234 +++R D GD + A+ ++ I+ + +K P L A+ +G+ Sbjct: 161 NAFTDLKSNRLDGVFGD---VAAIGKWLKNNPDYAIMDER-AKDPEYYGKGLGIAVRKGN 216 Query: 235 TEWYNIVSWTHYAMVTAEELGITQK 259 ++ + + E Q+ Sbjct: 217 DALLAEINAALDKVKASPEYAQMQE 241 >gi|317491413|ref|ZP_07949849.1| lysine-arginine-ornithine-binding periplasmic protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920960|gb|EFV42283.1| lysine-arginine-ornithine-binding periplasmic protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 243 Score = 129 bits (324), Expect = 8e-28, Method: Composition-based stats. Identities = 46/267 (17%), Positives = 94/267 (35%), Gaps = 28/267 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L I + ++ T ++ F + AN +GFD Sbjct: 1 MKKIIIATVLAGISVSASAAET-------------IRFAAEASYPPFEFMDANNQMQGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + + + + +L+ K+ID + D T R+ + Sbjct: 48 IDLANAICKQMKATCT---FTNQSFDSLIPSLKFKRIDAVISGMDITPERQKQVAFTA-- 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+D + +K ++ ++ L G + +Q G+T + Y + + + P+ ++ + Sbjct: 103 -PYYDNSALFIAEKGKVADIAALKGKRVGMQNGSTHQ----KYLQEKHPEITPVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTND---RPSEHVILPDIISKSPLAPAIIQGDTEW 237 + R DA GD + + N + V P+ L A+ Q + E Sbjct: 158 NAILDLKNGRLDAVFGDTAVVNEWLKQNSALTAVGDKVTDPNYFGT-GLGIAVRQNNAEL 216 Query: 238 YNIVSWTHYAMVTAEELG-ITQKNINQ 263 N + + I K Q Sbjct: 217 LNQFNAALNQLKQDGTYKTIYSKWFQQ 243 >gi|298291644|ref|YP_003693583.1| extracellular solute-binding protein family 3 [Starkeya novella DSM 506] gi|296928155|gb|ADH88964.1| extracellular solute-binding protein family 3 [Starkeya novella DSM 506] Length = 254 Score = 129 bits (324), Expect = 8e-28, Method: Composition-based stats. Identities = 51/239 (21%), Positives = 89/239 (37%), Gaps = 24/239 (10%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ--YLPLNA 85 +IKK ++ G F V G GFD+D +AL + K++ ++ + Sbjct: 22 AEIKK---VRIGTEGAYPPFNSVDTTGQLVGFDIDIAKALCEKM-----KVECTFVAQDW 73 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV--SQL 143 AL +K+ D + + T R+ + Y F+ K I+ + + L Sbjct: 74 DGIIPALLAKKYDAIVASMSITDERKKQVDFTI--PYYLTPGNFMAPKDTKITDITPAGL 131 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 G I Q+ TT+ L D +K K +P +E +A A R DA D Y Sbjct: 132 KGKVIGAQSSTTSASYLEDKYKGSEAKLYPTQ----DEANADLAAGRLDAVLVDKFVGYE 187 Query: 204 LKLTNDRPS--EHVILP-DIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 D + V ++ A+ + DTE +++ + + G +K Sbjct: 188 WLEKTDAGKCCKFVGPDLADVNPDGTGIAVRKEDTELREMLNKAIKEI---QADGTYKK 243 >gi|261341396|ref|ZP_05969254.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Enterobacter cancerogenus ATCC 35316] gi|288316710|gb|EFC55648.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Enterobacter cancerogenus ATCC 35316] Length = 247 Score = 129 bits (324), Expect = 8e-28, Method: Composition-based stats. Identities = 51/267 (19%), Positives = 88/267 (32%), Gaps = 24/267 (8%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K L + L F S A L +T V F + + + GFDV Sbjct: 1 MKSVLKVSLAALTLAFAVSSQAAD---------KLVVATDTAFVPFEFKQGD-KYVGFDV 50 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D A++ + D P++ ALQ+K +D+ T R+ ++ + Sbjct: 51 DLWAAIAKELKLD---YTLKPMDFSGIIPALQTKNVDLALAGITITDERKKAIDFSDG-- 105 Query: 122 TYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G ++ + SV L G + V+ GT + DY KA+ F ++ Sbjct: 106 YYKSGLLVMVKADNNDVKSVKDLDGKVVAVKGGTGSV----DYAKANIKTKDLRQFPNID 161 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +R DA D + T + + D + A +G + Sbjct: 162 NAYMELGTNRADAVLHDTPNILYFIKTAGN-GKFKAVGDSLEAQQYGIAFPKGSDDLRTK 220 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKD 267 V+ T +E G + + Sbjct: 221 VNGALK---TLKENGTYNEIYKKWFGT 244 >gi|240128915|ref|ZP_04741576.1| Histidine-binding protein precursor [Neisseria gonorrhoeae SK-93-1035] gi|268687302|ref|ZP_06154164.1| amino acid ABC transporter [Neisseria gonorrhoeae SK-93-1035] gi|268627586|gb|EEZ59986.1| amino acid ABC transporter [Neisseria gonorrhoeae SK-93-1035] Length = 268 Score = 129 bits (324), Expect = 8e-28, Method: Composition-based stats. Identities = 47/237 (19%), Positives = 84/237 (35%), Gaps = 11/237 (4%) Query: 37 KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96 + N F + + G+ +GFDVD A++ A KI++ F AL + Sbjct: 40 RVASNAEFAPFESLDSKGNVEGFDVDLMNAMAKA---GNFKIEFKHQPWDSLFPALNNGD 96 Query: 97 IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTT 155 D++ T R+ S+ + Q ++ K K +SS L + V G T Sbjct: 97 ADVVMSGVTITDDRKQSMDF--SDPYFEITQVVLVPKGKKVSSSDDLKKMNKVGVVTGYT 154 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS-EH 214 + +++ + N K FE V I D+ D + + N + Sbjct: 155 GDFSVSKLLGSDNPKI--ARFESVPLIIKELENGGLDSVVSDSAVIANYVKNNPAKGMDF 212 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSKDTTN 270 V LPD + A+ +GD +++ + + E I K + Sbjct: 213 VTLPD-FTTEHYGIAVRKGDEATVKMLNDALEKVRESGEYDKIYAKYFAKEGGQAAK 268 >gi|59712194|ref|YP_204970.1| lysine/arginine/ornithine transporter subunit [Vibrio fischeri ES114] gi|59480295|gb|AAW86082.1| lysine/arginine/ornithine transporter subunit [Vibrio fischeri ES114] Length = 258 Score = 129 bits (324), Expect = 8e-28, Method: Composition-based stats. Identities = 49/265 (18%), Positives = 96/265 (36%), Gaps = 26/265 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L + + K+ ++ GI F+ + +G+ KGFD Sbjct: 1 MKKWLLAAVVASTALTGAAQA---------KEWKQIRFGIEGAYPPFSWTEPSGELKGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + ++ + + + +L +++ D + T R+ + + Sbjct: 52 VDIANALCKEM---EARCKIVAQDWDGIIPSLLARKYDAIIAAMSITEERKKKIDFTEK- 107 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 F+ K + + L G ++ VQ TT + L D F + Sbjct: 108 -YALIPNKFVAKKGTKLVMTKEGLKGVTVGVQRATTHDKYLTDNF---GKGVDLKRYGSF 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234 +E +A R D GD SAL L +E+ + ++ A + D Sbjct: 164 DEAYLDLKAGRIDTVLGDASALEEGLLNKPGGTEYEFVGPSLTDPKWFGEGFGIATRKQD 223 Query: 235 TEWYNIVSWTHYAMVTAEELGITQK 259 + ++ A+ + E GI Q+ Sbjct: 224 KDLTEQLN---AAIDSLREKGIYQE 245 >gi|315650535|ref|ZP_07903601.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Eubacterium saburreum DSM 3986] gi|315487190|gb|EFU77506.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Eubacterium saburreum DSM 3986] Length = 275 Score = 129 bits (324), Expect = 8e-28, Method: Composition-based stats. Identities = 46/276 (16%), Positives = 89/276 (32%), Gaps = 38/276 (13%) Query: 1 MYKDFF-VSILCLIILFFTSFSTNASI---------------------LGDIK--KRGFL 36 M K ++++ L+ + + IK + G L Sbjct: 1 MKKKILTIALVGLMAASLAACGKASETQTSNAASESASDGKAESKSDGTAKIKTVEAGKL 60 Query: 37 KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96 N + + G D+D A++ + ++Q + L + S + Sbjct: 61 TLATNAEFPPYEYHDGD-KIVGIDMDIADAIAKKLG---LEVQIEDIAFDSVILEVTSGK 116 Query: 97 IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT 156 DI T R+ S+ + T Q I+ I L G ++ VQ GTT Sbjct: 117 ADIGLAGISATDERKQSVDFSDTYTT--SKQLIIVKDDSPIKGSKDLEGKTVGVQTGTTG 174 Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216 ++ +D P +++ + A + DA D K + S + Sbjct: 175 DILASDI-----KDVKPERYDKGMDAVQALSQGKVDAVIIDSEV---AKKFVEETSGLKV 226 Query: 217 LPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 L + + A AI +G+ E + V+ + + Sbjct: 227 LDEAFADENYAIAIKKGNKELLDSVNKALSELKSDG 262 >gi|327438812|dbj|BAK15177.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Solibacillus silvestris StLB046] Length = 264 Score = 129 bits (324), Expect = 8e-28, Method: Composition-based stats. Identities = 42/258 (16%), Positives = 82/258 (31%), Gaps = 12/258 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRG-----FLKCGINTGLVGFAEVKANGDW 56 K +L + + + T G L G F + G+ Sbjct: 5 KKFLITMLLMALTIILAACGTADDETSGSATTGEGGGKKLLVGTEATFAPFESMNDKGEI 64 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G DVD A+ I S+I++ + + F + + ++D+ + T R+ + Sbjct: 65 VGIDVDIMNAIGEEIG---SEIEFRNVGWEPVFQQITNGELDLGASGITITDERKETYDF 121 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 Y ++ + I ++ +L I VQ TT + + + K + + Sbjct: 122 --TDPYYEASLMIVVKEDSPIKTLDELKDQKISVQINTTGHIAAQNLQGKSSSKI--LAY 177 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E A GD + + N I D K + +G+TE Sbjct: 178 ENQPVAFQEVINGATAAAFGDNAVVIEYLKNNPDSGLKAIESDQFEKEYYGFMVKKGNTE 237 Query: 237 WYNIVSWTHYAMVTAEEL 254 N ++ + +L Sbjct: 238 LLNRLNEGLAKIKENGKL 255 >gi|323976755|gb|EGB71843.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli TW10509] Length = 243 Score = 129 bits (324), Expect = 8e-28, Method: Composition-based stats. Identities = 44/268 (16%), Positives = 92/268 (34%), Gaps = 30/268 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L ++ + G++ F + AN + GFD Sbjct: 1 MKKLVLAALLASCAFGASAAE-------------KINFGVSATYPPFESIGANNEIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + + + + +L+ ++ D + D T R + Sbjct: 48 IDLAKALCKQMQAECT---FTNHAFDSLIPSLKFRKYDAVISGMDITPERSKQVSFT--- 101 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y++ ++ KK + + L G I ++ GTT + + D + + + ++ + Sbjct: 102 TPYYENSAVVIAKKDTYKTFADLKGKRIGMENGTTHQKYIQD----QHPEVKTVSYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR---PSEHVILPDIISKSPLAPAIIQGDTEW 237 + R D GD + + TN + +E V P L A+ + Sbjct: 158 NAFIDLKNGRIDGVFGDTAVVNEWLKTNPQLGVATEKVTDPQYFGT-GLGIAVRPDNKAL 216 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVS 265 ++ A+ G QK +Q Sbjct: 217 LEKLNNALAAIKA---DGTYQKINDQWF 241 >gi|158424306|ref|YP_001525598.1| extracellular solute-binding protein [Azorhizobium caulinodans ORS 571] gi|158331195|dbj|BAF88680.1| extracellular solute-binding protein [Azorhizobium caulinodans ORS 571] Length = 269 Score = 129 bits (324), Expect = 8e-28, Method: Composition-based stats. Identities = 36/248 (14%), Positives = 82/248 (33%), Gaps = 16/248 (6%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + A L +I K G ++ G+N L + + GFDVD+ ++ + K++ Sbjct: 23 AAEARTLDEIMKSGVIRVGVNPTLPPLGKFDDKNEIVGFDVDYAGEIAKLLG---VKLEV 79 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + + + +R + + +ID + R + + + G + K + Sbjct: 80 VQVGSPDRIPFVTAGKIDFVMGAMTRNTDRAKVIDF--TVPVHTEVLGVLTTKANTFTDW 137 Query: 141 SQLSGASICVQA--GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 Q S+ G+T + + + + + A R A D+ Sbjct: 138 RQFDDPSVTFVQVRGSTPVKFIEENLPKA----KVTLLDNYPDAVRALAQGRGTAMI-DV 192 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 + + + I+ I + + +G T + W + A+ G T+ Sbjct: 193 IDFMGEHM-SKHKVDWRIVETPIDVYYCSLGVAKGSTGLKD---WLNVAIFDLYRKGKTE 248 Query: 259 KNINQVSK 266 + Sbjct: 249 ALWKKWFG 256 >gi|197284576|ref|YP_002150448.1| arginine ABC transporter substrate-binding protein [Proteus mirabilis HI4320] gi|227356758|ref|ZP_03841143.1| arginine ABC superfamily ATP binding cassette transporter, substrate-binding protein [Proteus mirabilis ATCC 29906] gi|194682063|emb|CAR41589.1| arginine ABC transporter, substrate-binding protein [Proteus mirabilis HI4320] gi|227163048|gb|EEI47983.1| arginine ABC superfamily ATP binding cassette transporter, substrate-binding protein [Proteus mirabilis ATCC 29906] Length = 244 Score = 129 bits (324), Expect = 8e-28, Method: Composition-based stats. Identities = 49/266 (18%), Positives = 94/266 (35%), Gaps = 26/266 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F ++L I L T+ + ++ F + AN GFD Sbjct: 1 MKKILFAALLTSITLSATAA-----------DKETIRFATEATYPPFEMIDANNQIVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A+ I + + + + +L+ ++ D L D T R+ + Sbjct: 50 VDLANAMCEKINAECT---FTNQSFDSLIPSLKFRRFDALMAGIDITPERQKQVDFTDS- 105 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+D + IS V+ L G I VQ GTT + + + + + + ++ + Sbjct: 106 --YYDNSAVFITVTGKISDVASLKGKQIGVQNGTTHQKFINE----QHKEMKTVPYDSYQ 159 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR---PSEHVILPDIISKSPLAPAIIQGDTEW 237 + R +A GD + + N + V P+ LA A+ +G+ + Sbjct: 160 NAVLDLKNGRIEAIFGDTAVVNEWLKKNPELGIVGDKVTDPNYFGT-GLAIAVRKGNADL 218 Query: 238 YNIVSWTHYAMVTAEELG-ITQKNIN 262 + ++ + I +K Sbjct: 219 QDKLNKALSEVKADGTYDVIYKKWFE 244 >gi|323339298|ref|ZP_08079588.1| glutamate ABC superfamily ATP binding cassette transporter substrate-binding protein [Lactobacillus ruminis ATCC 25644] gi|323093282|gb|EFZ35864.1| glutamate ABC superfamily ATP binding cassette transporter substrate-binding protein [Lactobacillus ruminis ATCC 25644] Length = 276 Score = 128 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 40/281 (14%), Positives = 88/281 (31%), Gaps = 27/281 (9%) Query: 1 MYKDFFVSILCLIILFF----TSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KAN 53 M K F I + L ++ + + ++K L G + F Sbjct: 5 MIKKFTFGIASVCALGLILCGCGKKSSDNSVQEVKDNKTLTIGTSADFAPFEFPIVKNGK 64 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 + G+D+ + ++ + K++ + L++ ++D++ T RE Sbjct: 65 KEITGYDIMIAQKVADKLG---VKLKIVNTEFPSLISELKNDKVDLVLSGMTKTAKREKV 121 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + + T + + +S G I Q TT E + K N+ Sbjct: 122 VDFSKPYYTVENVMLVQKKDADKYNKISDTKGKQIGAQQSTTQEDIIKKQMKGANLVTES 181 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK----SPLAPA 229 + E + + D + + A P ++ I ++ + A Sbjct: 182 VTTSLATE----LKNGKIDGLVLENAI--ANNYVKQNPGKYAIAKVKLTTGKDIESYSVA 235 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 +GD + +V+ + G Q+ +D N Sbjct: 236 AKKGDKKLIKVVNKVIDKIQKDGTSG-------QMLQDAQN 269 >gi|167840986|ref|ZP_02467670.1| glutamine ABC transporter periplasmic protein [Burkholderia thailandensis MSMB43] Length = 250 Score = 128 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 45/267 (16%), Positives = 91/267 (34%), Gaps = 25/267 (9%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + F +++ + ++ + S +A L G +T + F + + + GFD+ Sbjct: 3 RRSFIKTVVAVALVGASLASAHA---------KELVVGTDTSFMPFEFKQGD-KYVGFDL 52 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D ++ + P++ ALQ++ ID+ R ++ Sbjct: 53 DLWAEIAKDAG---WTYKIQPMDFAGLIPALQTQNIDVALSGMTIKEERRKAIDF--SDP 107 Query: 122 TYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G ++ I S+ L+G I + GT T D+ KAH F ++ Sbjct: 108 YYDSGLAAMVQANDTMIRSIDDLNGKVIAAKTGTATI----DWIKAHLKPKEIRQFPNID 163 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A A R DA D + + N+ + +S +G + Sbjct: 164 QAYLALEAGRVDAAMHDTPNVL-FFVNNEGKGRVKVAGAPVSGDKYGIGFPKGSP----L 218 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKD 267 V+ + + + G K + Sbjct: 219 VAKVNAELAKMKADGRYAKIYKKWFGS 245 >gi|325685063|gb|EGD27198.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 485 Score = 128 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 49/256 (19%), Positives = 99/256 (38%), Gaps = 22/256 (8%) Query: 12 LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG----FDVDFCRAL 67 + LF T+ A+ + G + F +G + G D++ R + Sbjct: 18 IAALFLTAPKAQAAS------KKTYIIGTDQTFKPFEIQDKDGTYNGKNPGIDIEILREI 71 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + K + ++ ALQS QID + T R+ ++ + Y DG Sbjct: 72 AKH---ENFKYELKIMSFNADVQALQSGQIDGMIAGMSVTEERKKTIDFSNS--YYTDGV 126 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 + K I+S+ L G ++ V+ GTT+ + K + + A + Sbjct: 127 CLAVAKDSKITSMKDLKGKTVNVKTGTTSAIYAKSIQKK--YGFKLKYYTNSNTSWADVK 184 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 A DA D +L + + I+ +S +PLA A+ +G+ + ++ + Sbjct: 185 AGNADACFDDGPSL---RYGIANGTGLRIVGKQVSNAPLAFAVKKGENQ--ELLKMFNDG 239 Query: 248 MVTAEELGITQKNINQ 263 + ++ G +K +N+ Sbjct: 240 LAWLKKTGRLKKIVNK 255 >gi|322392131|ref|ZP_08065593.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus peroris ATCC 700780] gi|321145031|gb|EFX40430.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus peroris ATCC 700780] Length = 280 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 47/236 (19%), Positives = 81/236 (34%), Gaps = 13/236 (5%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 + G + V + NG + GFD+D +A+S + K+ + P++ + LQ+ Sbjct: 42 ITIGFDNTFVPMGFEEKNGQYVGFDIDLAQAVSEKLG---IKVHFQPIDWDMKETELQNG 98 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGT 154 ID + T R + I Y Q I+ KK I SVS + + QAG+ Sbjct: 99 TIDAIWNGYSATDERREKVAFT---IPYMQNQQVIVSKKSQNIQSVSDMKDKVLGAQAGS 155 Query: 155 TTELTLA---DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 + L + K ++ E + R DA D T Sbjct: 156 SGYLDFEGQPELLKNIVKDQKANQYQSFNEALIDLQNDRIDALLIDRVYANYYLQTEGIL 215 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 ++ I P A + D ++ A V + G Q+ + + Sbjct: 216 EQYEIFPAGFESESFAVGVRPADQTLLANLN---KAFVELYQEGKFQEISQKWFGE 268 >gi|89902567|ref|YP_525038.1| extracellular solute-binding protein [Rhodoferax ferrireducens T118] gi|89347304|gb|ABD71507.1| extracellular solute-binding protein, family 3 [Rhodoferax ferrireducens T118] Length = 255 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 45/257 (17%), Positives = 84/257 (32%), Gaps = 19/257 (7%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 V+ L+ L S + L G + FA + G+DVD + Sbjct: 7 IVASAGLLTLALGSVQA---------QNKELVVGSSATYRPFAYENPAKEIVGYDVDIIK 57 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 A++ +I+ + F AL + +D++ R+ S + Sbjct: 58 AVAQKAG---LQIKVVNTPWTGIFAALNNGDVDLVISGVTINDKRKQSYDFTM--PYFEA 112 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 Q + K S+ L+G I V G+T + T++ F N FE + + Sbjct: 113 RQLIAVQKDSTAKSLKDLAGKKIGVVTGSTGDDTVSREFGKTNPDIR--RFESTPVVISE 170 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 DA GD + A ++ + + K + QG+ + ++ Sbjct: 171 LVNSGVDAAIGDN-GVIAFRVQ-EHKQLKTVNDPSFPKEYFGIVVKQGNKALLDKLNAGL 228 Query: 246 YAMVTAEELG-ITQKNI 261 A+ I +K Sbjct: 229 SAIKADGSYAQIYKKWF 245 >gi|188590808|ref|YP_001795408.1| high-affinity glutamine transporter, ABC transporter periplasmic protein peri_bind) [Cupriavidus taiwanensis LMG 19424] gi|170937702|emb|CAP62686.1| high-affinity glutamine transport protein, ABC transporter, periplasmic binding component peri_bind) [Cupriavidus taiwanensis LMG 19424] Length = 251 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 41/269 (15%), Positives = 88/269 (32%), Gaps = 23/269 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + ++ L + S +A + L+ + + NG GFD Sbjct: 3 LRRKCLIAALSAVAGLTFGASAHA------QDSNVLRVATDATFPPMEFI-ENGKRTGFD 55 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ A++ + ++++ ++ K L S++ D+ T R + Sbjct: 56 VELVEAMAKTMGK---QVEWTNIDFKGLIPGLVSRRFDMAVSGIYITPERRKVVDFTE-- 110 Query: 121 ITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y+ G + K I+ L+G + VQ GT + L D + + + E+ Sbjct: 111 -PYYTGGLVALVKSGNTAINKPEDLNGKKVSVQVGTKSVSFLRDTYP----QVTRVEVEK 165 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +E+ R DA A ++ ++ A+ + E Sbjct: 166 NQEMFNLVEIGRADAAVTGKP---AAMQYVKTRGGLRVVEQQLTTEEYGMAVRKDTPELT 222 Query: 239 NIVSWTHYAMVTAEEL-GITQKNINQVSK 266 ++ + +TQK +K Sbjct: 223 RALNAALAKVKADGTYAKLTQKWFGSAAK 251 >gi|322387530|ref|ZP_08061139.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding protein [Streptococcus infantis ATCC 700779] gi|321141397|gb|EFX36893.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding protein [Streptococcus infantis ATCC 700779] Length = 271 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 46/280 (16%), Positives = 96/280 (34%), Gaps = 23/280 (8%) Query: 1 MYKDFFVSILCLIILFFTSFS------TNASILGDIKKRGFLKCGINTGLVGFAE---VK 51 M ++ +LC + F + ++ S + IK++G L + F V Sbjct: 1 MKLKKWIFVLCSFLASFFLVACQSSSSSSQSAVEAIKQKGKLVVATSPDYAPFEFQALVD 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G D+D +A++ + K++ ++ +LQ+ + D+ T R Sbjct: 61 GKNQVVGADIDMAQAIADELG---VKLEVSSMSFDNVLTSLQTGKADLAIAGISATEER- 116 Query: 112 ISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 F Y + F++ K + L+ A+I Q GT E + + Sbjct: 117 -KEVFDFSIPYYENKISFLIRKTDLEKYKDLDSLASANIAAQKGTVPESMVKEQLPKAQ- 174 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + E ++ + DA D + N + + + A A Sbjct: 175 ---LTSLTNMGEAVNELQSGKVDAVHMDEPVALSYATKNADLAVATVSLTMKEGEENAVA 231 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 I +G+++ +V ++ G Q + + +K T Sbjct: 232 IKKGNSDLKEVVDKVIQ---KLKDDGTYQAYLEKAAKLTE 268 >gi|312899028|ref|ZP_07758415.1| putative glutamine ABC transporter periplasmic protein [Megasphaera micronuciformis F0359] gi|310619935|gb|EFQ03508.1| putative glutamine ABC transporter periplasmic protein [Megasphaera micronuciformis F0359] Length = 255 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 51/268 (19%), Positives = 96/268 (35%), Gaps = 18/268 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M+K F +++ L ++ ++ + + L G+N F + D+ GFD Sbjct: 1 MFKKFL-ALITLTLIAVSALTGCGTSSPQGNTEKTLIIGMNPNFPPFEFTQGE-DYVGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A++ + P + + ALQS QID+++ D T R + Sbjct: 59 VDLSKAIAEKLGMKP---EIKAMAFDGLIPALQSGQIDLIASGMDATPERREHVNFTQ-- 113 Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + DG ++ K I S L ++ Q GT ADY K + F + Sbjct: 114 TYFKDGYTIVVRKDNDTIHSFDDLKDITVGAQMGTKA----ADYAKQYGAVVK--EFNQN 167 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 ++ +H CDA + + + + I + +A A + ++E Sbjct: 168 DQCWMELESHTCDAVVVNRVVALYFLNQGGNKA-FKTVGEPILSAGVAMATTKENSELTA 226 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKD 267 V A+ + G + Sbjct: 227 KVD---KALDELKADGTYATLYKKWFGT 251 >gi|82543348|ref|YP_407295.1| arginine 3rd transport system periplasmic binding protein [Shigella boydii Sb227] gi|157155628|ref|YP_001462058.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli E24377A] gi|157160383|ref|YP_001457701.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli HS] gi|170020737|ref|YP_001725691.1| cationic amino acid ABC transporter, periplasmic binding protein [Escherichia coli ATCC 8739] gi|191172082|ref|ZP_03033626.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli F11] gi|193064415|ref|ZP_03045496.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli E22] gi|193069339|ref|ZP_03050294.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli E110019] gi|194428194|ref|ZP_03060737.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli B171] gi|194433140|ref|ZP_03065422.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Shigella dysenteriae 1012] gi|194438447|ref|ZP_03070537.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli 101-1] gi|209918109|ref|YP_002292193.1| arginine ABC transporter substrate binding component [Escherichia coli SE11] gi|215485991|ref|YP_002328422.1| arginine 3rd transport system periplasmic binding protein ArtJ [Escherichia coli O127:H6 str. E2348/69] gi|218553446|ref|YP_002386359.1| arginine ABC transporter periplasmic-binding protein [Escherichia coli IAI1] gi|218557764|ref|YP_002390677.1| arginine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli S88] gi|218688642|ref|YP_002396854.1| arginine ABC transporter subunit periplasmic-binding protein [Escherichia coli ED1a] gi|218694334|ref|YP_002402001.1| arginine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli 55989] gi|218699236|ref|YP_002406865.1| arginine ABC transporter subunit periplasmic-binding protein [Escherichia coli IAI39] gi|218704287|ref|YP_002411806.1| arginine ABC transporter periplasmic-binding protein [Escherichia coli UMN026] gi|253774110|ref|YP_003036941.1| cationic amino acid ABC transporter periplasmic binding protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254160975|ref|YP_003044083.1| arginine transporter subunit [Escherichia coli B str. REL606] gi|256021019|ref|ZP_05434884.1| arginine-binding periplasmic protein 2 precursor [Shigella sp. D9] gi|260843111|ref|YP_003220889.1| arginine 3rd transport system periplasmic binding protein ArtJ [Escherichia coli O103:H2 str. 12009] gi|260854152|ref|YP_003228043.1| arginine 3rd transport system periplasmic binding protein ArtJ [Escherichia coli O26:H11 str. 11368] gi|260867033|ref|YP_003233435.1| arginine 3rd transport system periplasmic binding protein ArtJ [Escherichia coli O111:H- str. 11128] gi|293404165|ref|ZP_06648159.1| arginine ABC transporter [Escherichia coli FVEC1412] gi|293409235|ref|ZP_06652811.1| arginine ABC transporter [Escherichia coli B354] gi|293433158|ref|ZP_06661586.1| arginine transport system substrate-binding protein [Escherichia coli B088] gi|298379948|ref|ZP_06989553.1| arginine ABC transporter [Escherichia coli FVEC1302] gi|306812691|ref|ZP_07446884.1| arginine-binding periplasmic protein 2 precursor [Escherichia coli NC101] gi|307311752|ref|ZP_07591392.1| cationic amino acid ABC transporter, periplasmic binding protein [Escherichia coli W] gi|312969073|ref|ZP_07783280.1| arginine-binding periplasmic protein 2 [Escherichia coli 2362-75] gi|312970984|ref|ZP_07785163.1| arginine-binding periplasmic protein 2 [Escherichia coli 1827-70] gi|331656933|ref|ZP_08357895.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli TA206] gi|331662272|ref|ZP_08363195.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli TA143] gi|331667234|ref|ZP_08368099.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli TA271] gi|331682369|ref|ZP_08382988.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli H299] gi|81244759|gb|ABB65467.1| arginine 3rd transport system periplasmic binding protein [Shigella boydii Sb227] gi|157066063|gb|ABV05318.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli HS] gi|157077658|gb|ABV17366.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli E24377A] gi|169755665|gb|ACA78364.1| cationic amino acid ABC transporter, periplasmic binding protein [Escherichia coli ATCC 8739] gi|190907609|gb|EDV67204.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli F11] gi|192928877|gb|EDV82490.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli E22] gi|192957292|gb|EDV87740.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli E110019] gi|194413754|gb|EDX30033.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli B171] gi|194418637|gb|EDX34724.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Shigella dysenteriae 1012] gi|194422671|gb|EDX38668.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli 101-1] gi|209911368|dbj|BAG76442.1| arginine ABC transporter substrate binding component [Escherichia coli SE11] gi|215264063|emb|CAS08405.1| arginine 3rd transport system periplasmic binding protein ArtJ [Escherichia coli O127:H6 str. E2348/69] gi|218351066|emb|CAU96770.1| arginine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli 55989] gi|218360214|emb|CAQ97764.1| arginine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli IAI1] gi|218364533|emb|CAR02215.1| arginine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli S88] gi|218369222|emb|CAR16977.1| arginine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli IAI39] gi|218426206|emb|CAR07030.1| arginine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli ED1a] gi|218431384|emb|CAR12262.1| arginine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli UMN026] gi|222032589|emb|CAP75328.1| Arginine-binding periplasmic protein 2 [Escherichia coli LF82] gi|242376676|emb|CAQ31388.1| artJ, subunit of arginine ABC transporter [Escherichia coli BL21(DE3)] gi|253325154|gb|ACT29756.1| cationic amino acid ABC transporter, periplasmic binding protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972876|gb|ACT38547.1| arginine transporter subunit [Escherichia coli B str. REL606] gi|253977090|gb|ACT42760.1| arginine transporter subunit [Escherichia coli BL21(DE3)] gi|257752801|dbj|BAI24303.1| arginine 3rd transport system periplasmic binding protein ArtJ [Escherichia coli O26:H11 str. 11368] gi|257758258|dbj|BAI29755.1| arginine 3rd transport system periplasmic binding protein ArtJ [Escherichia coli O103:H2 str. 12009] gi|257763389|dbj|BAI34884.1| arginine 3rd transport system periplasmic binding protein ArtJ [Escherichia coli O111:H- str. 11128] gi|281177995|dbj|BAI54325.1| arginine ABC transporter substrate binding component [Escherichia coli SE15] gi|284920713|emb|CBG33776.1| arginine ABC transporter, substrate-binding protein [Escherichia coli 042] gi|291323977|gb|EFE63399.1| arginine transport system substrate-binding protein [Escherichia coli B088] gi|291428751|gb|EFF01776.1| arginine ABC transporter [Escherichia coli FVEC1412] gi|291469703|gb|EFF12187.1| arginine ABC transporter [Escherichia coli B354] gi|294492075|gb|ADE90831.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli IHE3034] gi|298279646|gb|EFI21154.1| arginine ABC transporter [Escherichia coli FVEC1302] gi|305853454|gb|EFM53893.1| arginine-binding periplasmic protein 2 precursor [Escherichia coli NC101] gi|306908307|gb|EFN38806.1| cationic amino acid ABC transporter, periplasmic binding protein [Escherichia coli W] gi|307552703|gb|ADN45478.1| arginine-binding periplasmic protein 2 precursor [Escherichia coli ABU 83972] gi|310336745|gb|EFQ01912.1| arginine-binding periplasmic protein 2 [Escherichia coli 1827-70] gi|312286475|gb|EFR14388.1| arginine-binding periplasmic protein 2 [Escherichia coli 2362-75] gi|312945377|gb|ADR26204.1| arginine-binding periplasmic protein 2 precursor [Escherichia coli O83:H1 str. NRG 857C] gi|315060145|gb|ADT74472.1| arginine transporter subunit [Escherichia coli W] gi|320177806|gb|EFW52792.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Shigella boydii ATCC 9905] gi|320183200|gb|EFW58058.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Shigella flexneri CDC 796-83] gi|320196645|gb|EFW71268.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli WV_060327] gi|320199095|gb|EFW73692.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli EC4100B] gi|323155766|gb|EFZ41935.1| arginine-binding periplasmic protein 2 [Escherichia coli EPECa14] gi|323159682|gb|EFZ45661.1| arginine-binding periplasmic protein 2 [Escherichia coli E128010] gi|323172173|gb|EFZ57811.1| arginine-binding periplasmic protein 2 [Escherichia coli LT-68] gi|323175518|gb|EFZ61113.1| arginine-binding periplasmic protein 2 [Escherichia coli 1180] gi|323185176|gb|EFZ70541.1| arginine-binding periplasmic protein 2 [Escherichia coli 1357] gi|323190682|gb|EFZ75951.1| arginine-binding periplasmic protein 2 [Escherichia coli RN587/1] gi|323379297|gb|ADX51565.1| cationic amino acid ABC transporter, periplasmic binding protein [Escherichia coli KO11] gi|323947116|gb|EGB43127.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli H120] gi|323953436|gb|EGB49302.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli H252] gi|323958149|gb|EGB53858.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli H263] gi|323962973|gb|EGB58545.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli H489] gi|324116074|gb|EGC09998.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli E1167] gi|330910642|gb|EGH39152.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli AA86] gi|331055181|gb|EGI27190.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli TA206] gi|331060694|gb|EGI32658.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli TA143] gi|331065590|gb|EGI37483.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli TA271] gi|331080000|gb|EGI51179.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli H299] gi|332088881|gb|EGI93993.1| arginine-binding periplasmic protein 2 [Shigella boydii 5216-82] gi|332091102|gb|EGI96192.1| arginine-binding periplasmic protein 2 [Shigella dysenteriae 155-74] gi|332097166|gb|EGJ02149.1| arginine-binding periplasmic protein 2 [Shigella boydii 3594-74] Length = 243 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 44/268 (16%), Positives = 92/268 (34%), Gaps = 30/268 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L ++ + G++ F + AN + GFD Sbjct: 1 MKKLVLAALLASFTFGASAAE-------------KINFGVSATYPPFESIGANNEIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + + + + +L+ ++ D + D T R + Sbjct: 48 IDLAKALCKQMQAECT---FTNHAFDSLIPSLKFRKYDAVISGMDITPERSKQVSFT--- 101 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y++ ++ KK + + L G I ++ GTT + + D + + + ++ + Sbjct: 102 TPYYENSAVVIAKKDTYKTFADLKGKRIGMENGTTHQKYIQD----QHPEVKTVSYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR---PSEHVILPDIISKSPLAPAIIQGDTEW 237 + R D GD + + TN + +E V P L A+ + Sbjct: 158 NAFIDLKNGRIDGVFGDTAVVNEWLKTNPQLGVATEKVTDPQYFGT-GLGIAVRPDNKAL 216 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVS 265 ++ A+ G QK +Q Sbjct: 217 LEKLNNALAAIKA---DGTYQKINDQWF 241 >gi|42518711|ref|NP_964641.1| ABC transporter permease component [Lactobacillus johnsonii NCC 533] gi|41582997|gb|AAS08607.1| ABC transporter permease component [Lactobacillus johnsonii NCC 533] Length = 497 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 44/265 (16%), Positives = 98/265 (36%), Gaps = 30/265 (11%) Query: 1 MYKDFFVSILCLIILFFTSFS--------------TNASILGDIKKRGFLKCGINTGLVG 46 M K +S +++FF+ + S+L IKK G L G + Sbjct: 1 MKKTKLLSFFFALLMFFSLGATFIKPAQAASQKQVAEGSVLKKIKKSGELVVGTSADYPP 60 Query: 47 FAEV---KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103 + G D++ + ++ + K+ ++ +AL++ ++D++ Sbjct: 61 LEFTASENGKTKYVGVDIELAKDIAKDLG---VKLVIKNMSFDSLLVALETGKVDMVISA 117 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLA 161 T R+ S+ + + G+ F+++K K +S+ L G ++ Q G+ Sbjct: 118 MTPTPERKQSVAFS-KIYYKPSGEYFLVNKKDKDKYTSIQSLKGQTVGAQTGS----NQY 172 Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDI 220 + K+ ++ + A ++ + A + A N + H L + Sbjct: 173 NLVKSQMKDSKLKGLGKINNLVLALQSGKVSAVVVEELIAKAYAENNSGLAAVHSNLKET 232 Query: 221 ISKSPLAPAIIQGDTEWYNIVSWTH 245 + + A AI +G + V+ T Sbjct: 233 QAGN--AVAIAKGQDDLVAQVNKTI 255 >gi|167748299|ref|ZP_02420426.1| hypothetical protein ANACAC_03043 [Anaerostipes caccae DSM 14662] gi|167652291|gb|EDR96420.1| hypothetical protein ANACAC_03043 [Anaerostipes caccae DSM 14662] Length = 259 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 47/269 (17%), Positives = 89/269 (33%), Gaps = 21/269 (7%) Query: 1 MYKDFFVSI---LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K V++ L +LF + + + + G N F V N Sbjct: 1 MRKILTVALAGVLAATMLFAGCSKKEEAAIPE-----KIIVGTNAEFPPFEYVDDNKKID 55 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+ + ++ + KI+ + K +L+SK I+ ++ R ++ + Sbjct: 56 GFDIAMMKEIAKRM---DVKIEIKNMEFKSLIGSLESKTINAVAAGMTKDPERMEAVDFS 112 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE-LTLADYFKAHNMK----YH 172 Y Q I+ K + +++L G + VQ GTT + L + F Sbjct: 113 DS--YYTSSQVMIVKKDSKLKKMTELKGKKVGVQEGTTGDKLATGENFGEKQKPVVKGVD 170 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 F + + DA D N I+ D ++ A+ + Sbjct: 171 VRRFPKGVNAVMDLKNGGVDAVVIDEKPAMEFVKNNKG---LKIVRDKAAEEYYCIALPK 227 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNI 261 G+ + ++ AM L + Sbjct: 228 GNEKLVKEINKQLKAMKEDGTLDKLKAKY 256 >gi|320183197|gb|EFW58055.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtI [Shigella flexneri CDC 796-83] Length = 243 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 50/269 (18%), Positives = 96/269 (35%), Gaps = 32/269 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ T ++ F + AN GFD Sbjct: 1 MKKVLIAALIAGFSLSATAAET-------------IRFATEASYPPFESIYANNQIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL I + + +L+ ++++ + D T RE + Sbjct: 48 VDLAQALCKEIDATCT---FSNQAFDSLIPSLKFRRVEAVMAGMDITPEREKQVLFT--- 101 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+D + ++ +SV QL G + VQ GTT + + D + + + ++ + Sbjct: 102 TPYYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFIMD----KHPEITTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + D P + + K L A+ QG+TE Sbjct: 158 NAKLDLQNGRIDGVFGDTAVVTEWLK--DNPKLAAVGDKVTDKDYFGTGLGIAVRQGNTE 215 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVS 265 ++ A+ ++ G + N+ Sbjct: 216 LQQKLN---TALEKVKKDGTYETIYNKWF 241 >gi|320333844|ref|YP_004170555.1| ABC transporter periplasmic subunit [Deinococcus maricopensis DSM 21211] gi|319755133|gb|ADV66890.1| ABC-type transporter, periplasmic subunit family 3 [Deinococcus maricopensis DSM 21211] Length = 251 Score = 128 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 45/266 (16%), Positives = 91/266 (34%), Gaps = 27/266 (10%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + ++ L LI S +A+ L G LK G+ F GFDVD Sbjct: 5 RTLMIAALALIT------SASAATLEK----GVLKIGMEGTYPPFTYKDEQNQLVGFDVD 54 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 +A+++ + K +++ LQ+ + D++ T R+ S+ Sbjct: 55 IAKAVAAKLG---LKTEFVLTEWSGILAGLQANKYDVIVNQVGVTAERQKSIAF--STPY 109 Query: 123 YFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + I+ K +++ L G + V G+ E L D + + + Sbjct: 110 AYSSAQIIVRKNDNAAYKTLASLKGKRVGVGLGSNYEKMLRDA-----GGINVVTYPGAS 164 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E R DA D + + + P + + + +A A+ + +T+ Sbjct: 165 EYLRDLAVGRLDAALNDRLMVGYFAKSQNLPVKGAGVIED--PQAIAIALKKTNTDLKAK 222 Query: 241 VSWTHYAMVTAEELGITQKNINQVSK 266 + A++ + G K + Sbjct: 223 ID---RALLQLKADGTYAKISRKWFG 245 >gi|260772505|ref|ZP_05881421.1| amino acid ABC transporter amino acid-binding protein [Vibrio metschnikovii CIP 69.14] gi|260611644|gb|EEX36847.1| amino acid ABC transporter amino acid-binding protein [Vibrio metschnikovii CIP 69.14] Length = 258 Score = 128 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 49/269 (18%), Positives = 95/269 (35%), Gaps = 26/269 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + L + + K+ ++ GI F+ +A+G +GFD Sbjct: 1 MKKWLLIVAIAASALSGIAQA---------KEWKTVRFGIEGAYPPFSWTEADGSLRGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + + + +P + +L +++ D + T R+ + + Sbjct: 52 VDMANALCAEMQVECV---IIPQDWDGIIPSLLARRYDAIIAAMSITEERKKRVDFTKKY 108 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + FI K + + L G I VQ TT + L D + + + + Sbjct: 109 AQIPN--RFIAKKDANLDFTPEGLKGVRIGVQRATTHDKYLTDNY---GRSVNIVRYGSF 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234 ++ R A GD SAL L + + ++ + A+ + D Sbjct: 164 DDAYLDLANGRIAAVLGDASALEEGMLNRPGGDGYEFVGPSLTDPKWFGEGMGIAVRKQD 223 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQ 263 ++ A+ + E GI Q+ Q Sbjct: 224 KALTEQLN---RAIASLREKGIYQQIAAQ 249 >gi|169835618|ref|ZP_02868806.1| Amino acid-binding protein [candidate division TM7 single-cell isolate TM7a] Length = 269 Score = 128 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 61/275 (22%), Positives = 97/275 (35%), Gaps = 27/275 (9%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKR--------GFLKCGINTGLVGFAEVKANG 54 K F I + L F S +L DI +R + G N G F N Sbjct: 6 KPLFGKIWIIGALLFMSIIIW--MLYDILQREGAIGRYDDVIVMGTNAGFKPFEYKNGN- 62 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + GFDVD + ++ ++ ++ AL S+Q+D++ T RE + Sbjct: 63 EIVGFDVDIAKEIAKK---TNKTLKIEDMSFDGLLPALNSRQVDMVIAGMSVTPEREKNA 119 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + Y Q I+ K I + QL G I VQ GTT D + H Sbjct: 120 LFSKS--YYSAAQRMIIKKGSSIKNKYQLEGKKIGVQLGTTG-----DTLASKIKGAHIA 172 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 F + A D D + E ++LP +S A AI G+ Sbjct: 173 QFPTAPSVLTELNAGGVDVAILDNAPAEQYTTGFK---ELIVLPGSLSNEDYAIAIKLGN 229 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 + + ++ M ++ G +K I + + T Sbjct: 230 NKLLDQINQVIDEM---KQDGRYKKLIKKYFGNDT 261 >gi|295115438|emb|CBL36285.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [butyrate-producing bacterium SM4/1] Length = 300 Score = 128 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 46/228 (20%), Positives = 85/228 (37%), Gaps = 17/228 (7%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 L G N + + G DV+ A+ + D +Q + AL S Sbjct: 85 LIMGTNATFPPYEYYDGD-AIVGIDVEIAEAIGEKLGMD---VQVEDMEFDALIPALVSD 140 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 ++D ++ T RE S+ T Q I+ + I+SV L+G + VQ GTT Sbjct: 141 KVDFVAAGMTVTPDREASVNFTDTYAT--AAQVIIVKEGSDIASVDDLAGKVVGVQLGTT 198 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215 +L +++ + + E + + DA D + + V Sbjct: 199 GDLLVSEI-----EGTTVERYNKGFEAVQSVTQGKIDAVVIDNAPAKNFVAQGEG---LV 250 Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 IL + +S A A+ + +TE ++ A+ +E G +++ Sbjct: 251 ILEEALSSEDYAMAVNKDNTELLEQING---AIAELKEEGTLDAIVDK 295 >gi|283852210|ref|ZP_06369483.1| extracellular solute-binding protein family 3 [Desulfovibrio sp. FW1012B] gi|283572436|gb|EFC20423.1| extracellular solute-binding protein family 3 [Desulfovibrio sp. FW1012B] Length = 250 Score = 128 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 41/225 (18%), Positives = 84/225 (37%), Gaps = 11/225 (4%) Query: 39 GINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQID 98 GI+ G F V +G GFDV+ ++ + K+++ P++ AL +K+ID Sbjct: 33 GIDFGFPPFGFVDKDGKPTGFDVESLDWIAKKMGF---KVKHQPMDWDGIIPALLAKKID 89 Query: 99 ILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTT 156 I++ T R + + I Y++ ++ K +++ QL SG + +Q GT T Sbjct: 90 IIASGMSATAERAQKVDFS---IPYYEVTQVLVVPAKETATLPQLLTSGKKLGIQRGTVT 146 Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216 L + K+ + ++ + + R D + K P + Sbjct: 147 AKLLEEMAAKPEYKFEAVPYDSTDLSMEDVKVGRIAGSGMDSTI---AKELMKNPGFKIA 203 Query: 217 LPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 A+ + D E+ + V+ ++ + Sbjct: 204 GTFDADPEKYGYAMRKEDKEFQDKVNKGLKLLMADPHWAELKAKY 248 >gi|213966208|ref|ZP_03394393.1| glutamate binding protein [Corynebacterium amycolatum SK46] gi|213951143|gb|EEB62540.1| glutamate binding protein [Corynebacterium amycolatum SK46] Length = 313 Score = 128 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 38/277 (13%), Positives = 92/277 (33%), Gaps = 21/277 (7%) Query: 11 CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70 + L ++L DI + G + G G E + +++G D D R + Sbjct: 35 TTMSLAACGSGGPRNLLADI-EAGHVTLGTKFDQPGLGERTPDREFEGVDNDVSRYVIEY 93 Query: 71 I----FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 I D ++++ + +R + + ++++++ R ++ A Sbjct: 94 IANKNGWDVPEMEWRETPSAQRETLINNGEVNMIAATYSINAGRLAAVDFA--GPYLVTH 151 Query: 127 QGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 Q ++ +GI + ++ G +C +G+T + D F+ Sbjct: 152 QALLVRGSEGIQGLDDVAPGTRLCSVSGSTPAQKVKDALPE----VQLQEFDTYAACAEG 207 Query: 186 YRAHRCDAYTGDISALYALKLTNDRP--SEHVIL------PDIISKSPLAPAIIQGDTEW 237 + DA T D + L + ++ + + +GD Sbjct: 208 VKQGVVDALTTDATILAGFAQRYKERFGDDFRVVELRNPDGSYWTNEYYGIGLPKGDDAS 267 Query: 238 YNIVSWTHYAMVTAEEL-GITQKNINQVSKDTTNPDV 273 ++ ++ EL I +K++ + P + Sbjct: 268 REAINEALESLYDTGELQKIVKKHLGDKFELGDKPAI 304 >gi|331676648|ref|ZP_08377344.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli H591] gi|331075337|gb|EGI46635.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli H591] Length = 260 Score = 128 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 44/268 (16%), Positives = 92/268 (34%), Gaps = 30/268 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L ++ + G++ F + AN + GFD Sbjct: 18 MKKLVLAALLASFTFGASAAE-------------KINFGVSATYPPFESIGANNEIVGFD 64 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + + + + +L+ ++ D + D T R + Sbjct: 65 IDLAKALCKQMQAECT---FTNHAFDSLIPSLKFRKYDAVISGMDITSERSKQVSFT--- 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y++ ++ KK + + L G I ++ GTT + + D + + + ++ + Sbjct: 119 TPYYENSAVVIAKKDTYKTFADLKGKRIGMENGTTHQKYIQD----QHPEVKTVSYDSYQ 174 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR---PSEHVILPDIISKSPLAPAIIQGDTEW 237 + R D GD + + TN + +E V P L A+ + Sbjct: 175 NAFIDLKNGRIDGVFGDTAVVNEWLKTNPQLGVATEKVTDPQYFGT-GLGIAVRPDNKAL 233 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVS 265 ++ A+ G QK +Q Sbjct: 234 LEKLNNALAAIKA---DGTYQKINDQWF 258 >gi|228477200|ref|ZP_04061838.1| polar amino acid ABC uptake transporter substrate binding protein [Streptococcus salivarius SK126] gi|228251219|gb|EEK10390.1| polar amino acid ABC uptake transporter substrate binding protein [Streptococcus salivarius SK126] Length = 270 Score = 128 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 42/279 (15%), Positives = 91/279 (32%), Gaps = 18/279 (6%) Query: 1 MY--KDFFVSILCLIIL-FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANG 54 M K + + + L + S++ + L +K +G L +N F Sbjct: 1 MKPWKKLLLGLASVFALTALAACSSSTNTLDKVKDKGTLTVALNPHFAPFEFKTIQDGKD 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G D++ +A++ + K+++ ++ ++QS + DI T R+ Sbjct: 61 TIVGADIEIAKAIADELG---VKVKFSEMSFDNVLASVQSGKADIAISGISATKERQK-- 115 Query: 115 GLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 F Y ++ K + S+ VQ G+ E KA+ + Sbjct: 116 IFDFSDTYYESETVLVVKKDATGTYKQTGDFAKKSVAVQKGSIQESI----AKANLSDAN 171 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + + E ++ + + + + N + I SK A A+ + Sbjct: 172 VVSLAQPGEAINELKSGQVEGVVLEKAIAQGYVDQNSDLAVSDITLKSDSKDAYAVAMPK 231 Query: 233 GDTEWYNIVSWTHYAMVTAEELGIT-QKNINQVSKDTTN 270 G + V+ + ++ Q K +T Sbjct: 232 GSDKLKAKVNKVIAKLKKEGKIDSYVQDAYALSLKSSTK 270 >gi|288870949|ref|ZP_06115884.2| amino acid ABC transporter, amino acid-binding protein [Clostridium hathewayi DSM 13479] gi|288865282|gb|EFC97580.1| amino acid ABC transporter, amino acid-binding protein [Clostridium hathewayi DSM 13479] Length = 313 Score = 128 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 38/233 (16%), Positives = 85/233 (36%), Gaps = 13/233 (5%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP--LNAKERFLA 91 G G + V +G++ GFD++ ++ + ++++P ++ + + Sbjct: 84 GTFTVGFDQEFPPMGYVGDDGEYTGFDLEVAEEVAKRLG-----MEFVPQPVDWAAKDME 138 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151 L+S ID + T + + Q F++ + GI +++ L+G + VQ Sbjct: 139 LESGNIDCIWNGFTMT---GREDDYTWTEAYMANQQVFVVTAESGIKTLADLAGKVVEVQ 195 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 A ++ E L D + DA D + A R Sbjct: 196 AESSAEAALKDDPNLTGTFGTLQSTPDYNTAFMDLQMGAVDAIAMD--EVVARFQIEQRQ 253 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQ 263 + ++L + ++ A +G+ + V A+ L I++K ++ Sbjct: 254 VDFIVLDETLAAENYAVGFKKGNDALKDQVQAQLEALAADGTLAKISEKWFDK 306 >gi|260459414|ref|ZP_05807669.1| extracellular solute-binding protein family 3 [Mesorhizobium opportunistum WSM2075] gi|259034968|gb|EEW36224.1| extracellular solute-binding protein family 3 [Mesorhizobium opportunistum WSM2075] Length = 261 Score = 128 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 47/241 (19%), Positives = 86/241 (35%), Gaps = 23/241 (9%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L+ G F + ++G GFD+D +AL + K ++ + ALQ+ Sbjct: 27 TLRIGTEGAYPPFNNLTSDGKLVGFDIDIAQALCDQM---KVKCTFVAQDWDGIIPALQA 83 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV--SQLSGASICVQA 152 + D + + T R+ + + + Y + K + V L+G +I V Sbjct: 84 GKFDAIVASMSITPERKEKVDFSHK--YYNTPSALAVPKDSTLKGVTKEDLAGKTIGVAT 141 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 TT +Y + E A R DA DI L L + + Sbjct: 142 TTTH----FNYASKTYTDSTVKGYPSSPEEQADLANGRLDAIEDDIVVLQQW-LDSPDGA 196 Query: 213 EHVILPDIISKSPL-------APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 IL S P+ A+ +G+T ++V+ + A+ G ++ ++ Sbjct: 197 CCKILGQP-SPQPVDIFGPGAGIAVRKGET---DLVNKLNEAIDAIRANGKYKEINDKYF 252 Query: 266 K 266 K Sbjct: 253 K 253 >gi|289168796|ref|YP_003447065.1| ABC transporter substrate-binding protein [Streptococcus mitis B6] gi|288908363|emb|CBJ23205.1| ABC transporter substrate-binding protein [Streptococcus mitis B6] Length = 268 Score = 128 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 46/273 (16%), Positives = 94/273 (34%), Gaps = 19/273 (6%) Query: 3 KDFFVSILCLIIL--FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWK 57 K +++ L++L F + ++ + IK +G L +N F V Sbjct: 5 KKVLMTMFGLVMLPLLFACSNNQSAGIEAIKSKGKLVVALNPDFAPFEYQKVVDGKNQIV 64 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G D++ +A+++ + + ++ P++ ++QS + D+ T R S Sbjct: 65 GSDIELAKAIATELGVE---LELSPMSFDNVLASVQSGKADLAISGVSKTDER--SKVFD 119 Query: 118 FRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F Y I+ K SV+ L+ + Q G+ E D + Sbjct: 120 FSVPYYTSKNKVIVKKSDLATYQSVNDLAQKKVGAQKGSIQETMAKDLL----QNSSLVS 175 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + ++ + DA + N + I D A A+ + Sbjct: 176 LPKNGNLITDLKSGQLDAVIFEEPVAKGFVENNPDLAIAEIEFDQEKDDSYAVAMKKDSK 235 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 E V A+ ++ G +K I+ K + Sbjct: 236 ELKAAVD---QAIQKLKDSGDLEKLIDDAFKAS 265 >gi|225860826|ref|YP_002742335.1| ABC transporter substrate-binding protein - glutamine-binding protein [Streptococcus pneumoniae Taiwan19F-14] gi|298229503|ref|ZP_06963184.1| ABC transporter substrate-binding protein - glutamine-binding protein [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254195|ref|ZP_06977781.1| ABC transporter substrate-binding protein - glutamine-binding protein [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502655|ref|YP_003724595.1| amino acid ABC superfamily transporter ATP-binding protein [Streptococcus pneumoniae TCH8431/19A] gi|225727378|gb|ACO23229.1| ABC transporter substrate-binding protein - glutamine-binding protein [Streptococcus pneumoniae Taiwan19F-14] gi|298238250|gb|ADI69381.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus pneumoniae TCH8431/19A] gi|301794435|emb|CBW36869.1| putative extracellular amino acid-binding protein [Streptococcus pneumoniae INV104] gi|327389580|gb|EGE87925.1| bacterial extracellular solute-binding s, 3 family protein [Streptococcus pneumoniae GA04375] Length = 271 Score = 128 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 44/276 (15%), Positives = 93/276 (33%), Gaps = 23/276 (8%) Query: 1 MYKDFFVSILCLIILFF------TSFSTNASILGDIKKRGFLKCGINTGLVGF---AEVK 51 M ++ +LC + F + + + S + IK++G L + F + V Sbjct: 1 MKSKKWIFVLCNFLASFFLVACQSGSNGSQSAVEAIKQKGKLVVATSPDYAPFEFQSLVD 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G D+D +A++ + K++ L ++ +LQ+ + D+ T R Sbjct: 61 GKNQVVGADIDMAQAIADELG---VKLEILSMSFDNVLTSLQTGKADLAVAGISATDER- 116 Query: 112 ISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 F Y + F++ K ++ L A+I Q GT E + + Sbjct: 117 -KEVFDFSIPYYENKISFLVRKADVEKYKDLTSLESANIAAQKGTVPESMVKEQLPKAQ- 174 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + E +A + DA D + N + + + A A Sbjct: 175 ---LTSLTNMGEAVNELQAGKIDAVHMDEPVALSYAAKNAGLAVATVSLKMKDGDANAVA 231 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 + + + +V ++ G Q + + + Sbjct: 232 LRKNSDDLKEVVDKVIQ---KLKDEGTYQSYLEKAA 264 >gi|186473374|ref|YP_001860716.1| extracellular solute-binding protein [Burkholderia phymatum STM815] gi|184195706|gb|ACC73670.1| extracellular solute-binding protein family 3 [Burkholderia phymatum STM815] Length = 289 Score = 128 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 54/270 (20%), Positives = 93/270 (34%), Gaps = 15/270 (5%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 L L F +A+ +IK RG+L F V A+G G+D D Sbjct: 22 LRTCALALAATFGIVHVAHAASAEEIKARGYLSVATEDDYNPFEFV-ADGKNTGYDNDLL 80 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 + I D K Q +P + + + D+ T R+ + A T Sbjct: 81 ALVRKKIGVD-VKQQIMP--WSGILPGVTTGKYDMALTAVLVTEERKKTFDFAS--PTCE 135 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY------HPIVFER 178 + K I + L G + + G+ L + + K+ I ++ Sbjct: 136 AVTFYATKKGSPIKTPDDLVGKVVGAETGSAMLADLKLFDEQLKKKHGGNGIKQIIEYQS 195 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E R DA +L +L T RP + I + +A A+ +G+T+ Sbjct: 196 YPEAYQDLGVGRVDAVANTQISLNSLVKT--RPDVFAVGQAIGKPTYIAWAVKKGNTDVL 253 Query: 239 NIVSWTHYAMVTAEEL-GITQKNINQVSKD 267 +V + + E+ + QK + KD Sbjct: 254 KMVDAALLELRKSGEMYQLQQKWLGASYKD 283 >gi|328462013|gb|EGF34197.1| glutamine-binding protein precursor [Lactobacillus helveticus MTCC 5463] Length = 196 Score = 128 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 30/207 (14%), Positives = 74/207 (35%), Gaps = 12/207 (5%) Query: 71 IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130 + + ++ A R L++ ID + T R + + G + Sbjct: 1 MLGKDATASFVTTTANTRIPLLKNGNIDAVLATMTITPERAKQVDF--SKPYFPAGSSLL 58 Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190 + I +V L+G ++ GTT + + + ++ + +A +A++ Sbjct: 59 VPDNSKIKNVKDLNGETVLAVKGTTAVNDVHKFEPKA----RVLQYDDYGQAMSALKANQ 114 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 A T D L + N + ++ + + +P A+ +G ++V + A+ Sbjct: 115 GVALTTDNGLLAGIAQENPG---YKLVGGVYNNAPYGIAMNKGQ---KDMVDHINKALDQ 168 Query: 251 AEELGITQKNINQVSKDTTNPDVQRFL 277 ++ G + I + ++ L Sbjct: 169 LKKNGTYDRLIKKWFAGIPGFSLKGVL 195 >gi|87121939|ref|ZP_01077824.1| polar amino acid uptake family ABC transporter, periplasmic substrate-binding protein [Marinomonas sp. MED121] gi|86162737|gb|EAQ64017.1| polar amino acid uptake family ABC transporter, periplasmic substrate-binding protein [Marinomonas sp. MED121] Length = 516 Score = 128 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 46/219 (21%), Positives = 86/219 (39%), Gaps = 16/219 (7%) Query: 1 MYK---DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K F+ LIIL A L +I+ + ++ G+ T + + + G+ Sbjct: 1 MLKAVSSLFMGTF-LIILSSAFHHAFADDLAEIQAKDLIRIGVKTDYPPWGMLSSAGEIV 59 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GF+ D + + + +++ + + RF L+ ++D+L T R + + Sbjct: 60 GFEPDLAHLIGAELG---VQVKLKSVTSGNRFQLLEEGEVDVLIATVGDTQQRRKRVTM- 115 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT-TELTLADYFKAHNMKYHPIVF 176 P Y G + K I+ Q+ G IC+ G + + DY P++ Sbjct: 116 IEPHYYRSGVTLLSAKADKINRWEQIRGEKICLYGGAYFNKQLIQDY------DIEPLIL 169 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215 + A +C A+ D A+Y L LT D ++ Sbjct: 170 FNTRDAQLALLTKKCRAWAYDNGAIYHL-LTFDSWQDYE 207 >gi|225405627|ref|ZP_03760816.1| hypothetical protein CLOSTASPAR_04848 [Clostridium asparagiforme DSM 15981] gi|225042847|gb|EEG53093.1| hypothetical protein CLOSTASPAR_04848 [Clostridium asparagiforme DSM 15981] Length = 287 Score = 128 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 43/236 (18%), Positives = 83/236 (35%), Gaps = 13/236 (5%) Query: 20 FSTNASILGDIKKRG-FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 + A+ + K G L N + G+ G D D RA++ + ++ Sbjct: 53 TTAEAAGEEETKAAGGKLIMVTNAEFPPYEYH-EGGEIVGIDADIARAIADELG---MEL 108 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + + L S + D R+ S+ Q I+ I+ Sbjct: 109 EIEDIAFDSIIPELTSGKADFAMAGMTVDEKRKQSVDF--SDTYAKASQRIIVKSDSAIA 166 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + L G + VQ GTT +L ++D + + + E A + DA D Sbjct: 167 TPDDLKGKVVGVQQGTTGDLYVSDLEADNT---TVERYNKGFEAVQALSQGKIDAVVIDG 223 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 K+ ++ IL + + A A+ +G+TE + ++ T + + +L Sbjct: 224 EP---AKVFVEQTDGLKILDEAFTDEEYAVAVKKGNTELLDKINSTLKNLKESGKL 276 >gi|296158681|ref|ZP_06841511.1| extracellular solute-binding protein family 3 [Burkholderia sp. Ch1-1] gi|295891249|gb|EFG71037.1| extracellular solute-binding protein family 3 [Burkholderia sp. Ch1-1] Length = 267 Score = 128 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 93/248 (37%), Gaps = 13/248 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M++ F+ +L ++ T+ A L I K G ++ G+N + A GFD Sbjct: 1 MFRAVFL-VLAAVVATMTAQVAEARTLDQIIKSGTIRIGVNPNFPPMSSYNATNQLAGFD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D ++S + K +++P A +R L S +IDI + R + + F Sbjct: 60 IDVGNKIASTL---NIKAEFVPTEAAQRVPFLVSDRIDISLGALTRSAER--AQLIDFTV 114 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQ--AGTTTELTLADYFKAHNMKYHPIVFER 178 + + + K + + L+ SI + G + + D M ++ E Sbjct: 115 PLHTESMSVLTTSKIKATKWTDLNSPSITLVDMRGNWSVDYVKDKLPKAKM----LLVES 170 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + + A R DA +I + L D I + + + +G++ Sbjct: 171 IADTVRAVAQGRGDAIVENIDFFQNFTKNYPNI-KWRTLNDPIFVNYDSIGVSKGNSTLK 229 Query: 239 NIVSWTHY 246 + ++ + Sbjct: 230 DYLNVVLF 237 >gi|206578017|ref|YP_002239489.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Klebsiella pneumoniae 342] gi|288936337|ref|YP_003440396.1| cationic amino acid ABC transporter periplasmic binding protein [Klebsiella variicola At-22] gi|290510607|ref|ZP_06549977.1| arginine transport system substrate-binding protein [Klebsiella sp. 1_1_55] gi|206567075|gb|ACI08851.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Klebsiella pneumoniae 342] gi|288891046|gb|ADC59364.1| cationic amino acid ABC transporter, periplasmic binding protein [Klebsiella variicola At-22] gi|289777323|gb|EFD85321.1| arginine transport system substrate-binding protein [Klebsiella sp. 1_1_55] Length = 243 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 47/269 (17%), Positives = 85/269 (31%), Gaps = 32/269 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L + + G++ F + AN GFD Sbjct: 1 MKKLVLAALLTTFTFGAAAAE-------------KISFGVSATYPPFESMDANNQIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + + + + AL+ K+ D + D T R + Sbjct: 48 LDLAKALCKQMQAECT---FTNHAFDSLIPALKFKKYDAVISGMDITPERSKQVAFTD-- 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+ ++ KK S L G I ++ GTT + L D + + + ++ + Sbjct: 103 -PYYANSALVIAKKDAFHSFDDLKGKRIGMENGTTHQKYLQD----KHPEVKTVAYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + T P P + L A+ + Sbjct: 158 NAIIDLKNGRIDGVFGDTAVVNEWLKT--NPQLGAATPKVTDPQYFGTGLGIAVRPDNKA 215 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVS 265 ++ A+ G QK NQ Sbjct: 216 LLEKLNAALKAIKA---DGTYQKISNQWF 241 >gi|331651878|ref|ZP_08352897.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli M718] gi|331050156|gb|EGI22214.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli M718] Length = 260 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 44/268 (16%), Positives = 92/268 (34%), Gaps = 30/268 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L ++ + G++ F + AN + GFD Sbjct: 18 MKKLVLAALLASFTFGTSAAE-------------KINFGVSATYPPFESIGANNEIVGFD 64 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + + + + +L+ ++ D + D T R + Sbjct: 65 IDLAKALCKQMQAECT---FANHAFDSLIPSLKFRKYDAVISGMDITPERSKQVSFT--- 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y++ ++ KK + + L G I ++ GTT + + D + + + ++ + Sbjct: 119 TPYYENSAVVIAKKDTYKTFADLKGKRIGMENGTTHQKYIQD----QHPEVKTVSYDSYQ 174 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR---PSEHVILPDIISKSPLAPAIIQGDTEW 237 + R D GD + + TN + +E V P L A+ + Sbjct: 175 NAFIDLKNGRIDGVFGDTAVVNEWLKTNPQLGVATEKVTDPQYFGT-GLGIAVRPDNKAL 233 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVS 265 ++ A+ G QK +Q Sbjct: 234 LEKLNNALAAIKA---DGTYQKISDQWF 258 >gi|294814954|ref|ZP_06773597.1| secreted protein [Streptomyces clavuligerus ATCC 27064] gi|326443325|ref|ZP_08218059.1| secreted protein [Streptomyces clavuligerus ATCC 27064] gi|294327553|gb|EFG09196.1| secreted protein [Streptomyces clavuligerus ATCC 27064] Length = 329 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 48/252 (19%), Positives = 85/252 (33%), Gaps = 21/252 (8%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 I+ +G ++ G + +G G D D AL + K ++ Sbjct: 70 QAIRDKGVVRVGSDIAYPPVEFKDDSGATTGIDPDIAAALGKELG---VKFEFQNGTFDT 126 Query: 88 RFLALQSKQIDILSRNTDWTLLRE----------ISLGLAFRPITYFDGQGFIMHK--KK 135 L+SK+ DI T R+ + G+ F + G K + Sbjct: 127 LITGLRSKRYDIAMSAMTDTKDRQNGVDSETGKKVGEGVDFVD-YFTAGVSIYTPKGKDQ 185 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMK--YHPIVFERVEEIDAAYRAHRCDA 193 GI + + L G I VQ GT +E K K F+ E RA DA Sbjct: 186 GIKTWADLCGKKIAVQRGTVSEDLAKAENKKCGDKGPIKIEAFDNDLEAQTRLRAGGADA 245 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 + D + + ++ + + +P A + +T+ + V A++ E Sbjct: 246 GSADFPVAAYAVQKSGGGKDFQLVGEQVEAAPYGIAFAKDNTQLRDAVKAALDAIIKNGE 305 Query: 254 LGITQKNINQVS 265 QK +++ Sbjct: 306 ---YQKVLDKWG 314 >gi|264676834|ref|YP_003276740.1| cystine-binding periplasmic protein [Comamonas testosteroni CNB-2] gi|299529654|ref|ZP_07043091.1| cystine-binding periplasmic protein [Comamonas testosteroni S44] gi|262207346|gb|ACY31444.1| cystine-binding periplasmic protein [Comamonas testosteroni CNB-2] gi|298722517|gb|EFI63437.1| cystine-binding periplasmic protein [Comamonas testosteroni S44] Length = 269 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 40/269 (14%), Positives = 81/269 (30%), Gaps = 15/269 (5%) Query: 1 MYKDFFVSILCLIILFFT-------SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M K ++ + L + S + A L G++ Sbjct: 1 MKKRTLLASVALTAILAACGKNEPASNTAAAPAPAPAAAAAKLVVGLDDNFPPMGFRDEK 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 + GFD+D R ++ ++++ P++ + L K++D L R+ Sbjct: 61 NELVGFDIDMAREVAKRA---NIEVEFKPIDWNAKEAELLGKRVDALWNGLTILEERKEK 117 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + + Q I+ I + + G + Q G++ L + + Sbjct: 118 ILF--SDPYMVNKQIIIVKAGSPIKGKADMVGKIVGAQEGSSAVTALTKDKELSDKFKET 175 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 +F A R D + + N +P +V+L + + Sbjct: 176 KLFGDNIAAMMDLEAGRLD--VVVVDEVVGRYYVNKKPDNYVVLAEDFGTEDYGVGFRKD 233 Query: 234 DTEWYNIVSWTHYAMVTAEELG-ITQKNI 261 D N V+ M + I QK Sbjct: 234 DEATRNKVNDVLTEMKKDGKAAEIAQKWF 262 >gi|212697318|ref|ZP_03305446.1| hypothetical protein ANHYDRO_01886 [Anaerococcus hydrogenalis DSM 7454] gi|212675767|gb|EEB35374.1| hypothetical protein ANHYDRO_01886 [Anaerococcus hydrogenalis DSM 7454] Length = 268 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 38/280 (13%), Positives = 87/280 (31%), Gaps = 29/280 (10%) Query: 1 MY--KDFFVSILCLIILFFTSFS--------------TNASILGDIKKRGFLKCGINTGL 44 M K ++ + +L S +N + +I G + G + Sbjct: 1 MKNLKKILLAFVTTTLLVSCSGKDQKGNSNESDLSNNSNKKVSSEIVSDGVIDLGTSADF 60 Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 + N G D + + + + + ++ ++ +++S ++D Sbjct: 61 PPYEFFDDNNKIVGIDAEIAQEIGKKLGVE---VKIKDMDFSSIIASIESGKLDGGIAG- 116 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164 T + + F Q I+ K + L G + Q G+T E D + Sbjct: 117 -ITANEDRKKNVNFSDTYGKSVQKVIVKKDSSFKNPEDLKGKKVASQLGSTGEAAAKDTY 175 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 F + + A + DA D N + +L ++K Sbjct: 176 GEE----KVQSFSKNMDAIVALNNDKVDAVVLDDQVAEKFAAANK---DLKVLDKELAKD 228 Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQ 263 A A+ + + + V+ + + I +K +++ Sbjct: 229 EYAIALDKKNDKLLEEVNKAIDELKKDGTIDKIFEKYMDK 268 >gi|253582493|ref|ZP_04859715.1| amino acid-binding protein [Fusobacterium varium ATCC 27725] gi|251835638|gb|EES64177.1| amino acid-binding protein [Fusobacterium varium ATCC 27725] Length = 246 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 89/252 (35%), Gaps = 17/252 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + +L ++++ + T S K G N F + N G D Sbjct: 1 MKKLFKLFMLTVLLVLAAACGT--SKTEQAKDNKVYVIGTNAEYPPFEYL-ENDQVCGLD 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D A++ + + ++ N ALQ+K++D++ T R ++ + Sbjct: 58 ADIISAIAQKL---NIQYKWSNTNFDGLIPALQTKKMDVVIAGMSITPERAKAVNFSI-- 112 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 FI +K K I+ + L + + GTT E A F Sbjct: 113 PYLSSNVAFIANKNKPINGIEDLENKNFGAELGTTKEAAARKIKGA-----TVTPFSSNT 167 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A ++ + DA D S A+K + P ++L + P A A + DTE Sbjct: 168 GALVALKSSKIDAIVLDESV--AVKFVENNPE--LMLVGTLEGEPKAIAFNKDDTELMEK 223 Query: 241 VSWTHYAMVTAE 252 + ++ Sbjct: 224 FNKALQELIDDG 235 >gi|308174188|ref|YP_003920893.1| high affinity arginine ABC transporter ATP-binding protein [Bacillus amyloliquefaciens DSM 7] gi|307607052|emb|CBI43423.1| high affinity arginine ABC transporter (ATP-binding protein) [Bacillus amyloliquefaciens DSM 7] gi|328554132|gb|AEB24624.1| high affinity arginine ABC transporter (ATP-binding protein) [Bacillus amyloliquefaciens TA208] gi|328912523|gb|AEB64119.1| high affinity arginine ABC transporter (ATP-binding protein) [Bacillus amyloliquefaciens LL3] Length = 255 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 49/267 (18%), Positives = 92/267 (34%), Gaps = 14/267 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V + I ++ + S K + L G + F + GFD Sbjct: 1 MKKWLLVLVAACITFALSACGSGNSGSEGGKNK--LIMGTSADYKPFEYKDGD-QIVGFD 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL D ++ ++ AL+SKQ+D++ T R+ + Sbjct: 58 VDLAKALGKKTGYD---VEVQDMDFNSLITALKSKQVDMILSGMTPTPERKKQVDF--SG 112 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 I Y + K I S+ L G ++ VQ G+ E A + R+ Sbjct: 113 IYYTANNMIVTKKGSSIKSLDDLKGKTVGVQLGSIQEEKGKKL--ASKYGFQLEDRNRIS 170 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 ++ ++ R DA + +N+ +S A A + ++ Sbjct: 171 DLTEEIKSGRFDAAIIEDIVAQGYFSSNNDLQGFASADAKSDESGSAIAFRKDS----DL 226 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKD 267 + + A+ E+ G +K + + Sbjct: 227 TAKFNKALKEMEKNGEIEKLKKKWFTN 253 >gi|293605112|ref|ZP_06687504.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] gi|292816515|gb|EFF75604.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] Length = 247 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 46/236 (19%), Positives = 87/236 (36%), Gaps = 16/236 (6%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 ++ + V +G GFD++ AL+ A+ K++++ ++ K ALQ+ Sbjct: 28 TIRAVTDATFPPMEFV-KDGKRTGFDIELVEALAGAMGK---KVEWIDIDFKGLIPALQA 83 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 + DI T R S + F Y G + I ++ L G + VQ GT Sbjct: 84 GRADIAVSAIYITPER--SKVVDFTDPYYAGGLVVLTKADGPIKTLKDLDGRKVSVQVGT 141 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 + L ++F + + E+ +E+ + R DA A KL + Sbjct: 142 KSVNYLKEHFPS----VQRVEVEKNQEMFNLVQIGRADAAVTGKP---AAKLFAQSTTGL 194 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 +L D I+ A+ + E ++ + G Q +N+ + Sbjct: 195 TVLGDQITTEDYGIAVPKSKPELTRELNAALQKIKG---DGSYQAIVNKWFEAPKK 247 >gi|329295876|ref|ZP_08253212.1| glutamine ABC transporter periplasmic protein [Plautia stali symbiont] Length = 248 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 50/267 (18%), Positives = 91/267 (34%), Gaps = 23/267 (8%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K + + L F+ ST A L +T V F + + + GFD+ Sbjct: 1 MKSLIKVSVAALALAFSLSSTAADK--------KLVVATDTAFVPFEFKQGD-KYVGFDI 51 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D A++ + D P++ ALQ+K +D+ T R+ ++ + Sbjct: 52 DLWDAIAKQLKLD---YTLKPMDFSGIIPALQTKNVDLALAGITITEERKKAIEFSDG-- 106 Query: 122 TYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G ++ + I + L+G + V++GT + DY KAH F ++ Sbjct: 107 YYKSGLLVMVRNNENDIKGIDDLNGKVVAVKSGTGSV----DYAKAHIKTKDLRQFPNID 162 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +R DA D + T + + D I A +G + Sbjct: 163 NAYMELGTNRADAVLHDTPNILYFIHTAGK-GRFKAIGDSIEAQQYGIAFPKGSDDLREK 221 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKD 267 V+ T + G + + Sbjct: 222 VNGALK---TLHDNGTYNTIYKKWFGN 245 >gi|323967295|gb|EGB62718.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli M863] gi|325496802|gb|EGC94661.1| arginine-binding periplasmic protein 2 precursor [Escherichia fergusonii ECD227] gi|327253647|gb|EGE65276.1| arginine-binding periplasmic protein 2 [Escherichia coli STEC_7v] Length = 243 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 44/268 (16%), Positives = 92/268 (34%), Gaps = 30/268 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L ++ + G++ F + AN + GFD Sbjct: 1 MKKLVLAALLSSCAFGASAAE-------------KINFGVSATYPPFESIGANNEIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + + + + +L+ ++ D + D T R + Sbjct: 48 IDLAKALCKQMQAECT---FTNHAFDSLIPSLKFRKYDAVISGMDITPERSKQVSFT--- 101 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y++ ++ KK + + L G I ++ GTT + + D + + + ++ + Sbjct: 102 TPYYENSAVVIAKKDTYKTFADLKGKRIGMENGTTHQKYIQD----QHPEVKTVSYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR---PSEHVILPDIISKSPLAPAIIQGDTEW 237 + R D GD + + TN + +E V P L A+ + Sbjct: 158 NAFIDLKNGRIDGVFGDTAVVNEWLKTNPQLGVATEKVTDPQYFGT-GLGIAVRPDNKAL 216 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVS 265 ++ A+ G QK +Q Sbjct: 217 LEKLNNALAAIKA---DGTYQKINDQWF 241 >gi|67921803|ref|ZP_00515320.1| extracellular solute-binding protein, family 3 [Crocosphaera watsonii WH 8501] gi|67856395|gb|EAM51637.1| extracellular solute-binding protein, family 3 [Crocosphaera watsonii WH 8501] Length = 294 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 59/253 (23%), Positives = 98/253 (38%), Gaps = 13/253 (5%) Query: 2 YKDFFVS--ILCLIILFFTSFSTNAS---ILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 K+ VS I+ L +LFF+SF ++ +L I K G LK GI V F NGD Sbjct: 5 MKNIKVSGIIINLFLLFFSSFPSHGQEETVLERIDKTGLLKVGIREDAVPFGYRDINGDL 64 Query: 57 KGFDVDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 +G +DF L + + +K I+ RF + + +DI L E Sbjct: 65 EGLCLDFIAVLRDKLKQELNKQVIAIKVYKSTLFNRFELVSDRIVDIECGPNTIRELPEY 124 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + + + K K I L +I V TT E +A+ + N+ Sbjct: 125 QIQFSTPFLLTGTQLLIEADKAKTIDPDGSLENVNIGVLKNTTNEQLMAEKYPLANLVQF 184 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP--SEHVILP-DIISKSPLAPA 229 V R A R + DA+ D L + D ++++++P + I Sbjct: 185 QGVTGRYR-GIQALRGDKIDAFASDGILLVGEAIVQDLRLGADYLLVPRNPIDCEKYGLI 243 Query: 230 IIQGDTEWYNIVS 242 + D +W + ++ Sbjct: 244 LPNNDPQWLSFIN 256 >gi|265984043|ref|ZP_06096778.1| extracellular solute-binding protein family 3 [Brucella sp. 83/13] gi|264662635|gb|EEZ32896.1| extracellular solute-binding protein family 3 [Brucella sp. 83/13] Length = 265 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 53/254 (20%), Positives = 84/254 (33%), Gaps = 18/254 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + + + + S + + + K L G F +K +G GFD Sbjct: 1 MKRIAMATSVAALAITVGSMAAGVANAEEPLK---LTIGTEGAYPPFNFIKPDGTLSGFD 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD RAL + +K +++ + ALQS + D + T R+ + + Sbjct: 58 VDIARALCDQM---KAKCEFVTQDWDGAIPALQSGKFDAFIASMSITDERKKQVDFTNK- 113 Query: 121 ITYFDGQGFIMHKKKGISSV--SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y G K I V L+G +I VQ G+TT Y + + Sbjct: 114 -YYNTPPGIAAPKDTDIKGVTKEDLAGKTIGVQ-GSTTHAN---YSEKTYTDSTIKSYPT 168 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP----AIIQGD 234 EE R DA D L + D +I P AI +G Sbjct: 169 AEEYRLDLANGRLDAVNDDSVTLVEWLKSPDGACCKMIGTFPPVTEIHGPGAGIAIKKGR 228 Query: 235 TEWYNIVSWTHYAM 248 E + A+ Sbjct: 229 PELVAKFNAAIKAI 242 >gi|269797244|ref|YP_003311144.1| extracellular solute-binding protein family 3 [Veillonella parvula DSM 2008] gi|269093873|gb|ACZ23864.1| extracellular solute-binding protein family 3 [Veillonella parvula DSM 2008] Length = 260 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 56/270 (20%), Positives = 101/270 (37%), Gaps = 22/270 (8%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K ++++ + + + N ++ G L+ G T F + + + GFDV Sbjct: 5 KKLTAIALVAVAAMGLLAGCGN-DKPKMTQQEGVLRVGSETTFPPFEFTEGD-KYVGFDV 62 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D A+S I K+++ + A+QS ID+++ + T RE L + Sbjct: 63 DLSEAISKKIG---LKMEFKSMGFDALIPAVQSGDIDMIAAGINATPEREKVLDFSDV-- 117 Query: 122 TYFDGQGFIM---HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 YFD GFI I ++ +L+G ++ VQ GT + Sbjct: 118 -YFDQGGFITVVRKDNTTIHNMDELAGKTVGVQIGTIPVE-----MAQKIPGTTVKQIDS 171 Query: 179 VEEIDAAYRAHRCDAYTGDIS-ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 I +A D D + A+Y LK D + ++ + + +G+ Sbjct: 172 NANIFMELKAGTIDGAIIDNAVAMYYLKQGAD--QDLKLVGEPTKSPGTVLGVKKGNKAL 229 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKD 267 V+ A+ +E G QK N+ D Sbjct: 230 QEAVN---KALKELKEDGTYQKIYNKWFGD 256 >gi|15677462|ref|NP_274618.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria meningitidis MC58] gi|7226862|gb|AAF41964.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria meningitidis MC58] gi|316983864|gb|EFV62844.1| bacterial extracellular solute-binding s, family 3 family protein [Neisseria meningitidis H44/76] gi|325134711|gb|EGC57350.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria meningitidis M13399] gi|325140742|gb|EGC63256.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria meningitidis CU385] gi|325199793|gb|ADY95248.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria meningitidis H44/76] Length = 268 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 44/220 (20%), Positives = 79/220 (35%), Gaps = 10/220 (4%) Query: 37 KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96 + N F + + G+ +GFDVD A++ A KI++ F AL + Sbjct: 40 RVASNAEFAPFESLDSKGNVEGFDVDLMNAMAKA---GNFKIEFKHQPWDSLFPALNNGD 96 Query: 97 IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTT 155 D++ T R+ S+ + Q ++ K K +SS L + V G T Sbjct: 97 ADVVMSGVTITDDRKQSMDF--SDPYFEITQVVLVPKGKKVSSSEDLKNMNKVGVVTGYT 154 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS-EH 214 + +++ N FE V I D+ D + + N + Sbjct: 155 GDFSVSKLLG--NDNPKIARFENVPLIIKELENGGLDSVVSDSAVIANYVKNNPAKGMDF 212 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 V LPD + A+ +GD +++ + + E Sbjct: 213 VTLPD-FTTEHYGIAVRKGDEATVKMLNDALEKVRESGEY 251 >gi|323142443|ref|ZP_08077264.1| ABC transporter, substrate-binding protein, family 3 [Phascolarctobacterium sp. YIT 12067] gi|322413088|gb|EFY03986.1| ABC transporter, substrate-binding protein, family 3 [Phascolarctobacterium sp. YIT 12067] Length = 258 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 37/238 (15%), Positives = 72/238 (30%), Gaps = 10/238 (4%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 + G++ + G D+D R ++++ P++ + L+S Sbjct: 28 KMVIGLDDNFAPMGYRNEKNEIVGMDIDLAREACKRAG---MEVEFKPIDWGAKEAELKS 84 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 K+ID + RE G+ + Q ++ K I ++ L G + VQ + Sbjct: 85 KRIDAIWNCFTVNPEREKVYGM--SKPYINNSQLVVVPKDSPIKTLEDLKGKIVAVQDDS 142 Query: 155 TTELTLADYFKAHNMKY--HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 T L + I R DA D +P Sbjct: 143 TGSYLLEQPAHKELAASMKEVRKYPDFAAIYMEIDNKRVDAAIVDAVLARGY-YDKKKPG 201 Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 + IL + +A A + D ++ + + M + + D T Sbjct: 202 AYRILEQNMGDEVVAIAFRKDDKDFKDRIDKAMDEMKKDGTCKKISE--KWMGADITK 257 >gi|311031015|ref|ZP_07709105.1| amino acid ABC transporter, amino acid-binding protein [Bacillus sp. m3-13] Length = 263 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 55/275 (20%), Positives = 104/275 (37%), Gaps = 25/275 (9%) Query: 1 MYKDFF---VSILCLIILFFTSFSTNASIL----GDIKKRGFLKCGINTGLVGFAEVKAN 53 M K F +SIL + +L S N D KK L G + F + Sbjct: 1 MKKWFLYSLISILVVGLLSACGTSGNGDETSGEGEDGKK--VLVMGTSADYPPFEYIDTE 58 Query: 54 --GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 + GFDVD +A++ + + ++ ++ A++S ID++ T R Sbjct: 59 VGEEIIGFDVDLAKAITEELGYE---LKVQDMDFGSLITAMKSGNIDLILAGMTPTEER- 114 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 + + F + Y + K I+S+ L G ++ VQ G+ + + N+ Sbjct: 115 -AEQVDFTNVYYTANHMIVSLKDSNITSLEDLVGKTVGVQMGSIQYDKAEEIAEEVNITI 173 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 +R+ +I + R DA + + + ++ + + D + A A+ Sbjct: 174 ENR--DRIPQIVQDLKTGRFDAAIIEDTVMKGFMEKDEDLTGFTLESD---EEGSAIALP 228 Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 +G +E + M EE G +K IN+ Sbjct: 229 KG-SELTEEFNRVLKEM---EENGEMEKLINKWFG 259 >gi|212705000|ref|ZP_03313128.1| hypothetical protein DESPIG_03068 [Desulfovibrio piger ATCC 29098] gi|212671552|gb|EEB32035.1| hypothetical protein DESPIG_03068 [Desulfovibrio piger ATCC 29098] Length = 246 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 44/253 (17%), Positives = 84/253 (33%), Gaps = 22/253 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M++ ++ LC ++L T + L N + G+ Sbjct: 1 MFRKLTLT-LCALVLMCTPVAAK-----------TLVVAGNCAFPPMEFLTDKKVPTGYS 48 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D+ ++ KI + + F L + DIL+ +T T R+ + F Sbjct: 49 IDYIHEIAKRAG---LKITFRDVAWDGIFAGLAAGNYDILASSTTITPERQQA--FDFTI 103 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y Q +M K K I+S++ L G ++ Q G T L + N+ ++ + Sbjct: 104 PYYGAVQAVVMPKGKKINSLADLKGLTVGSQIGITGVFVL----RKANVGAKIKEYDDIG 159 Query: 181 EIDAAYRAHRCDAYTGDISAL-YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 A R DA D + D + + + +G+TE Sbjct: 160 LAFEDLAAGRTDAVICDDPVAKFYANKREDFAGKFSVAYLHKDPEYYGFCLRKGETELLE 219 Query: 240 IVSWTHYAMVTAE 252 ++ +M Sbjct: 220 RLNKAIASMQADG 232 >gi|197334500|ref|YP_002156404.1| lysine-arginine-ornithine-binding periplasmic protein [Vibrio fischeri MJ11] gi|197315990|gb|ACH65437.1| lysine-arginine-ornithine-binding periplasmic protein [Vibrio fischeri MJ11] Length = 258 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 49/265 (18%), Positives = 95/265 (35%), Gaps = 26/265 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L + + K+ ++ GI F+ + +G+ KGFD Sbjct: 1 MKKWLLAAVVASTALTGAAQA---------KEWKQIRFGIEGAYPPFSWTEPSGELKGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + ++ + + + +L +++ D + T R+ + + Sbjct: 52 VDIANALCKEM---EARCKIVAQDWDGIIPSLLARKYDAIIAAMSITEERKKKIDFTEK- 107 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 F+ K + + L G ++ VQ TT + L D F + Sbjct: 108 -YALIPNKFVAKKGTDLVMTKEGLKGVTVGVQRATTHDKYLTDNF---GKGVVLKRYGSF 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234 +E +A R D GD SAL L E+ + ++ A + D Sbjct: 164 DEAYLDLKAGRIDTVLGDASALEEGLLNKPGGKEYEFVGPSLTDPKWFGEGFGIATRKQD 223 Query: 235 TEWYNIVSWTHYAMVTAEELGITQK 259 + ++ A+ + E GI Q+ Sbjct: 224 KDLTEQLN---AAIDSLREKGIYQE 245 >gi|188534334|ref|YP_001908131.1| glutamine ABC transporter periplasmic protein [Erwinia tasmaniensis Et1/99] gi|188029376|emb|CAO97253.1| Glutamine high-affinity transporter [Erwinia tasmaniensis Et1/99] Length = 248 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 53/268 (19%), Positives = 91/268 (33%), Gaps = 24/268 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M F VSI L + F S + L +T V F K +G + GFD Sbjct: 1 MKSIFKVSIAALTLAFSLSSTAAE---------KKLVVATDTAFVPFEF-KQDGKYVGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A++ + + P++ ALQ++ ID+ T R+ ++ + Sbjct: 51 VDLWDAIAKQL---NMEYTLKPMDFSGIIPALQTRNIDLALAGITITDERKKAIAFSDG- 106 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G ++ + + L+G + V++GT + DY K H F + Sbjct: 107 -YYKSGLLVMVKANNDSVKGIDDLNGKVVAVKSGTGSV----DYAKQHIKYKDLRQFPNI 161 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + +R DA D + T + + + D I A +G + Sbjct: 162 DNAYMELGTNRADAVLHDTPNILYFINTAGK-GQFKAVGDSIEAQQYGIAFPKGSDDLRE 220 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKD 267 V+ T E G + Sbjct: 221 KVNGALK---TLRENGTYNTLYKKWFGS 245 >gi|163802098|ref|ZP_02195994.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio sp. AND4] gi|159174239|gb|EDP59047.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio sp. AND4] Length = 256 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 48/264 (18%), Positives = 95/264 (35%), Gaps = 26/264 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + L ++ + S ++ GI F++ + +G GFD Sbjct: 1 MKKWLFAATLAAAVVSGAVQAKEWST---------VRFGIEGAYPPFSQTEPDGSLTGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + + + + + + +L +++ D + T R+ + + Sbjct: 52 VDMANALCAEM---KVECEIVAQDWDGIIPSLLARKYDAIIAAMSITEERKKRVDFTGK- 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +I K + + L G I VQ TT + L D + K + + + Sbjct: 108 -YALIPNKYIAKKGANL-DFNNLDGQKIAVQRATTHDKFLTDNY---GDKVEIVRYGSFD 162 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGDT 235 E + R A GD SAL A L + + + ++ A+ + D Sbjct: 163 EAYLDLASGRVAAVLGDASALEAGVLNKEGGDAYEFVGPSLTDPKWFGEGFGIAVRKQDK 222 Query: 236 EWYNIVSWTHYAMVTAEELGITQK 259 + + A+++ E G+ Q+ Sbjct: 223 DLTKKLD---AAILSLREKGVYQE 243 >gi|15901248|ref|NP_345852.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae TIGR4] gi|111658588|ref|ZP_01409245.1| hypothetical protein SpneT_02000263 [Streptococcus pneumoniae TIGR4] gi|14972882|gb|AAK75492.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae TIGR4] Length = 271 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 44/276 (15%), Positives = 93/276 (33%), Gaps = 23/276 (8%) Query: 1 MYKDFFVSILCLIILFF------TSFSTNASILGDIKKRGFLKCGINTGLVGF---AEVK 51 M ++ +LC + F + + + S + IK++G L + F + V Sbjct: 1 MKSKKWIFVLCNFLASFFLVACQSGSNGSQSAVDAIKQKGKLVVATSPDYAPFEFQSLVD 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G D+D +A++ + K++ ++ +LQ+ + D+ T R Sbjct: 61 GKNQVVGADIDMAQAIADELG---VKLEISSMSFDNVLTSLQTGKADLAVAGISATDER- 116 Query: 112 ISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 F Y + F++ K ++ L A+I Q GT E + + Sbjct: 117 -KEVFDFSIPYYENKISFLVRKADVEKYKDLTSLESANIAAQKGTVPESMVKEQLP---- 171 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 K + E +A + DA D + N + + + A A Sbjct: 172 KVQLTSLTNMGEAVNELQAGKIDAVHMDEPVALSYAAKNAGLAVATVSLKMKDGDANAVA 231 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 + + + +V ++ G Q + + + Sbjct: 232 LRKNSDDLKEVVDKVVQ---KLKDEGTYQSYLEKAA 264 >gi|227873559|ref|ZP_03991802.1| ABC superfamily ATP binding cassette transporter, binding protein [Oribacterium sinus F0268] gi|227840605|gb|EEJ50992.1| ABC superfamily ATP binding cassette transporter, binding protein [Oribacterium sinus F0268] Length = 195 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 38/191 (19%), Positives = 74/191 (38%), Gaps = 9/191 (4%) Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 L+ R + + ++DI N T R + A G + I SV + Sbjct: 3 LDPASRVEYVSTGKVDITLANFTVTKERAEKVDFAL--PYMKVALGVVSPDNAVIKSVDE 60 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G ++ + GTT E YF+A++ + ++ + A R DA++ D + + Sbjct: 61 LKGKTLIIAKGTTAET----YFEANHPEVKLQKYDAYADAYNALLDGRGDAFSTDNTEVI 116 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNI 261 A + P V + + +A A+ +G+ N ++ + + Q+ + Sbjct: 117 AWAKS--NPGFTVGIETLGDYDTIAAAVAKGNESLLNFLNEEIETLGKEQFFHKDYQETL 174 Query: 262 NQVSKDTTNPD 272 V T+PD Sbjct: 175 EPVFGSDTDPD 185 >gi|306829759|ref|ZP_07462948.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding protein [Streptococcus mitis ATCC 6249] gi|304428110|gb|EFM31201.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding protein [Streptococcus mitis ATCC 6249] Length = 271 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 45/278 (16%), Positives = 95/278 (34%), Gaps = 22/278 (7%) Query: 2 YKDFFVSILCLIILFF-----TSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKAN 53 +K + +++ ++ +S ++ S + IK++G L + F V Sbjct: 3 FKKWILAVCSMLASMILVACQSSTDSSQSAVDAIKQKGKLVVATSPDYAPFEFQALVDGK 62 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G D+D +A++ + K++ ++ +LQ+ + D+ T R Sbjct: 63 NQVVGADIDMAQAIADELG---VKLEISSMSFDNVLTSLQTGKADLAIAGISATDER--K 117 Query: 114 LGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F Y + F++ K +S L+ A+I Q GT E + + Sbjct: 118 EVFDFSIPYYENKMSFLVRKADLDKYKDLSSLASANIAAQKGTVPETMVKEQLPNAQ--- 174 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + E +A + DA D + N + + A AI Sbjct: 175 -LTSLTNMGEAVNELQAGKVDAVHMDEPVALSYAGKNSDIVVASVNLTMKDGEANAVAIK 233 Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 + ++ +V ++ G Q + + +K T Sbjct: 234 KDQSDLKAVVDKVIQ---KLKDDGTYQTYLEKAAKLTE 268 >gi|259047073|ref|ZP_05737474.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein/permease protein [Granulicatella adiacens ATCC 49175] gi|259036123|gb|EEW37378.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein/permease protein [Granulicatella adiacens ATCC 49175] Length = 478 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 47/271 (17%), Positives = 98/271 (36%), Gaps = 12/271 (4%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 + + F NG++ G D++ ++++ A + ++++ L A Sbjct: 32 ETKKYVIATDITFAPFEYQDTNGEYVGIDIELMKSIAEA---EGFEVEFKALGFNAAVQA 88 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151 L++ Q+D + T R+ Y G G + K I+S+S L G + V+ Sbjct: 89 LEAGQVDAVMAGMGITDERKQKFNFTDS--YYDSGIGMGVSKNSDITSLSDLKGKKVAVK 146 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 GT + FE + DA D L +N+ P Sbjct: 147 LGTQGATYAESI--KSKYGFTITTFEDSSSMYQDVMVGNSDALFEDYPVLAYSITSNNLP 204 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT-TN 270 + +K+ A+ +G+ +++ + + +E G + IN+ + + N Sbjct: 205 --LKMTDHNENKTEYGVAVNKGENA--ELIAAFNNGLKKLKESGKYDEIINKYTTNANEN 260 Query: 271 PDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301 + LG+ K++ A GL ++ Sbjct: 261 TEATSILGLIKTNWKTLATGLWNTIVLTVVA 291 >gi|157963211|ref|YP_001503245.1| extracellular solute-binding protein [Shewanella pealeana ATCC 700345] gi|157848211|gb|ABV88710.1| extracellular solute-binding protein family 3 [Shewanella pealeana ATCC 700345] Length = 245 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 49/250 (19%), Positives = 87/250 (34%), Gaps = 28/250 (11%) Query: 1 MYKDFFV--SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANG-DW 56 M K V S+ L T K L G N F V A+G + Sbjct: 1 MKKSVLVVASLGLTGALMLTGCG---------KSDDVLVVGTNASFPPFEYVGGASGDEI 51 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFD+D + ++ K++ +N +AL + ++D ++ T R+ S+ Sbjct: 52 MGFDIDLAKQIAKDA-GKTLKVE--NMNFDSLIVALNAGKVDFIASGMTITPERQASVDF 108 Query: 117 AFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + Y Q +++K I+S+ L G I VQ G+T ++ Y Sbjct: 109 SE--PYYEATQMVLVNKDNNSINSLDDLKGKHIAVQLGSTGDIMAKSY------SQQVTA 160 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F E + + D D A+ P + ++ S A+ + Sbjct: 161 FNSGFEAVMELKNAKVDLVLFDSE--PAISFLEKNP-QLKMVELDFSPEFYGFAVAKDKV 217 Query: 236 EWYNIVSWTH 245 E N ++ + Sbjct: 218 ELLNSINSSL 227 >gi|158423075|ref|YP_001524367.1| ABC transporter substrate binding protein [Azorhizobium caulinodans ORS 571] gi|158329964|dbj|BAF87449.1| ABC transporter substrate binding protein [Azorhizobium caulinodans ORS 571] Length = 277 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 42/246 (17%), Positives = 82/246 (33%), Gaps = 14/246 (5%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 +A +IK RG + GI + V + G G D D R + + ++++ Sbjct: 28 PASAVTPEEIKARGKIIVGIQGDNPPWGFVTSEGKQDGIDADIARLYAKELG---VQVEF 84 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +PL R AL + ++D+L R ++ + I K I S Sbjct: 85 MPLEVNNRIPALTTGRVDVLFATMAMLPERAKAVQF--SKPYVANAIVLIGPKSAEIKSN 142 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + ++ +I V G + + + ++ A + + A G+ Sbjct: 143 ADMAKFTIGVAKGAAQDTQVTKNAPS---GTTIRRYDGDAASIQALVSGQVQAVGGN--I 197 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 Y ++ +P E K G+ E ++ + EL QK Sbjct: 198 FYIQRIEQAKPGEFE-NKLEFQKLYNGACTRLGEKEINASINAFIDKIKANGEL---QKI 253 Query: 261 INQVSK 266 ++ K Sbjct: 254 YDKWMK 259 >gi|91786595|ref|YP_547547.1| extracellular solute-binding protein [Polaromonas sp. JS666] gi|91695820|gb|ABE42649.1| amino acid ABC transporter substrate-binding protein, PAAT family [Polaromonas sp. JS666] Length = 277 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 40/252 (15%), Positives = 80/252 (31%), Gaps = 16/252 (6%) Query: 1 MYKDFFV---SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M + + S+ L S +A L +I + G+N L + Sbjct: 7 MARRTLLVAGSLALGSTLLGLPASASARTLDEIVASKKIVIGVNPTLPPLGIFNDKNEID 66 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD R L + K + + + + +R + S +ID + T R+ + Sbjct: 67 GFDVDVARKLGELLG---VKTEIVQVGSPDRIPFVSSGKIDAVLGAMTITAERQKVIDF- 122 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIV 175 + + G + K K +L+ + G+T + ++ Sbjct: 123 -TVPLHTEVLGVLTTKAKPYKDWMELNDTAVRLVEVRGSTPVKLAQEKLPKAQ----LLL 177 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + A R DA + + + T + I+ I A + +G+ Sbjct: 178 LDNYPDAVRAIAQGRADAMIDVMDFM--TEHTAKHKVDWRIVDAPIDVYFCAVGVQKGND 235 Query: 236 EWYNIVSWTHYA 247 +S Sbjct: 236 ALREKLSGAIKE 247 >gi|325970769|ref|YP_004246960.1| ABC transporter periplasmic protein [Spirochaeta sp. Buddy] gi|324026007|gb|ADY12766.1| ABC-type transporter, periplasmic subunit family 3 [Spirochaeta sp. Buddy] Length = 271 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 40/243 (16%), Positives = 81/243 (33%), Gaps = 12/243 (4%) Query: 13 IILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 LF A S L + +G G++ G+ GFDVD + ++ Sbjct: 16 ASLFAAGTKEQAIGGDSSLDKVMSKGQFVMGLDDNFPPMGFRNEKGEIVGFDVDLAKEVT 75 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 + ++ P++ + L + ID + T R+ ++ + Q Sbjct: 76 KRMGVT---LKLQPIDWNAKEQELNTGNIDCIWNGFTITEERKQAMTF--TAPYIHNAQV 130 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 ++ ++++ LSG S+ QAG++ + I F+ Sbjct: 131 VVVRDDSPYTTLASLSGKSVGYQAGSSASSAIDASPDFKKSIKTFIEFKENLTGLMDLEI 190 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 DA D++ A IL + ++ +GD + + V W+ Sbjct: 191 GGIDALVVDVTV--ANDNIKRSGKAFRILTEELAPEDYGIGFRKGDQKLADAV-WSQLLA 247 Query: 249 VTA 251 + A Sbjct: 248 MKA 250 >gi|149002780|ref|ZP_01827706.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP14-BS69] gi|237651184|ref|ZP_04525436.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae CCRI 1974] gi|237821264|ref|ZP_04597109.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae CCRI 1974M2] gi|147759074|gb|EDK66068.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP14-BS69] Length = 271 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 43/276 (15%), Positives = 92/276 (33%), Gaps = 23/276 (8%) Query: 1 MYKDFFVSILCLIILFF------TSFSTNASILGDIKKRGFLKCGINTGLVGF---AEVK 51 M ++ +LC + F + + + S + IK++G L + F + V Sbjct: 1 MKSKKWIFVLCNFLASFFLVACQSGSNGSQSAVEAIKQKGKLVVATSPDYAPFEFQSLVD 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G D+D +A++ + K++ ++ +LQ+ + D+ T R Sbjct: 61 GKNQVVGADIDMAQAIADELG---VKLEISSMSFDNVLTSLQTGKADLAVAGISATDER- 116 Query: 112 ISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 F Y + F++ K ++ L A+I Q GT E + + Sbjct: 117 -KEVFDFSIPYYENKISFLVRKADVEKYKDLTSLESANIAAQKGTVPESMVKEQLPKAQ- 174 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + E +A + DA D + N + + + A A Sbjct: 175 ---LTSLTNMGEAVNELQAGKIDAVHMDEPVALSYAAKNAGLAVATVSLKMKDGDANAVA 231 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 + + + +V ++ G Q + + + Sbjct: 232 LRKNSDDLKEVVDKVIQ---KLKDEGTYQSYLEKAA 264 >gi|116628190|ref|YP_820809.1| amino acid ABC transporter periplasmic protein [Streptococcus thermophilus LMD-9] gi|116101467|gb|ABJ66613.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus thermophilus LMD-9] gi|312278805|gb|ADQ63462.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus thermophilus ND03] Length = 264 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 43/268 (16%), Positives = 86/268 (32%), Gaps = 14/268 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWK 57 M K F ++ L+ + + + IK+ L ++ F V Sbjct: 1 MKKLFLGAMAFLVAVTLVACGSKKDADESIKENKKLVVAVSPDYPPFEFKTLVDGKDQVV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G D+ +A+++ + K++ ++ +LQS + D+ T R+ + Sbjct: 61 GSDIKLAQAIANELG---VKLEVTTMSFDNVLSSLQSGKADLAISGISVTDERKKT--FD 115 Query: 118 FRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F Y I+ K SS+ L G + VQ GT E K I Sbjct: 116 FSDPYYETQNAIIVRKDQESTYSSLDALKGKKVAVQKGTIEEG----LAKKQLKDSTVIS 171 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E ++ + DA + N + + A A+ +G+ Sbjct: 172 LTAMGEAINEVKSGQVDAVDLEKPVAEGYVAQNSDLVLASVALKVDDGDAKAVAMAKGND 231 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQ 263 + V+ + K+ ++ Sbjct: 232 KLKEAVNKVIKKLKADGTYDEYIKDASK 259 >gi|304397041|ref|ZP_07378920.1| cationic amino acid ABC transporter, periplasmic binding protein [Pantoea sp. aB] gi|304355190|gb|EFM19558.1| cationic amino acid ABC transporter, periplasmic binding protein [Pantoea sp. aB] Length = 243 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 51/266 (19%), Positives = 88/266 (33%), Gaps = 26/266 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L L T+ T ++ F V A+ +GFD Sbjct: 1 MKKMVLAALLAGFSLSATAAQT-------------IRFATEASYPPFEYVDADNKIQGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL I + + +L+ ++ D + D T RE + Sbjct: 48 VDLANALCKEIDATCT---FTNQAFDSLIPSLKFRRFDAVMAGMDITPDREKQVLFTK-- 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+D + +K ++SV L G + VQ GTT + L D + + ++ + Sbjct: 103 -PYYDNSALFVAQKGKVASVEALKGKRVGVQNGTTHQKYLTD----KHSDITIVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH--VILPDIISKSPLAPAIIQGDTEWY 238 + R DA GD + + N + + + L A+ G+TE Sbjct: 158 NAVLDLKNGRIDAVFGDTAVVNEWLKQNAALAAVGDKVTDKAYFGTGLGIAVRTGNTELQ 217 Query: 239 NIVSWTHYAMVTAEELG-ITQKNINQ 263 + + I K Q Sbjct: 218 TKFNGALDKIKADGTYKTIYSKWFQQ 243 >gi|322419251|ref|YP_004198474.1| family 3 extracellular solute-binding protein [Geobacter sp. M18] gi|320125638|gb|ADW13198.1| extracellular solute-binding protein family 3 [Geobacter sp. M18] Length = 247 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 39/251 (15%), Positives = 79/251 (31%), Gaps = 19/251 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M ++ + + L F S + A + + V AN GFD Sbjct: 1 MKSLRIMAAVLALGLCFVSAALAAPK--------AITVASDATWPPMEFVDANKKIVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +DF A++ ++ + F +++ Q D + + T R+ Sbjct: 53 IDFMTAVAKEAG---LQVTFKNTAWDGIFAGVEAGQYDAIISSVTITPERQAKYDFTAPY 109 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + GQ ++ K + + ++ L G I Q GTT + + ++ V Sbjct: 110 VNI--GQILVVPKAEKGTKIADLKGKKIGAQIGTTGAMEVKKVA-----GVELKTYDEVG 162 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPS-EHVILPDIISKSPLAPAIIQGDTEWYN 239 A R D L S + I+ +K + +G+ + Sbjct: 163 LAFEDMAAGRIAGVVCDEPTAVTYALQKKEYSTKFKIVGKPFTKEAYGIVVKKGNKDLVA 222 Query: 240 IVSWTHYAMVT 250 ++ A+ Sbjct: 223 QLNKGIAAVQK 233 >gi|148997552|ref|ZP_01825157.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP11-BS70] gi|168575853|ref|ZP_02721768.1| ABC transporter substrate-binding protein - glutamine-binding protein [Streptococcus pneumoniae MLV-016] gi|147756607|gb|EDK63648.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP11-BS70] gi|183578334|gb|EDT98862.1| ABC transporter substrate-binding protein - glutamine-binding protein [Streptococcus pneumoniae MLV-016] Length = 271 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 43/276 (15%), Positives = 92/276 (33%), Gaps = 23/276 (8%) Query: 1 MYKDFFVSILCLIILFF------TSFSTNASILGDIKKRGFLKCGINTGLVGF---AEVK 51 M ++ +LC + F + + + S + IK++G L + F + V Sbjct: 1 MKSKKWIFVLCNFLASFFLVACQSGSNGSQSAVEAIKQKGKLVVATSPDYAPFEFQSLVD 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G D+D +A++ + K++ ++ +LQ+ + D+ T R Sbjct: 61 GKNQVVGADIDMAQAIADELG---VKLEISSMSFDNVLTSLQTGKADLAVAGISATDER- 116 Query: 112 ISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 F Y + F++ K ++ L A+I Q GT E + + Sbjct: 117 -KEVFDFSIPYYENKISFLVRKADVEKYKDLTSLESANIAAQKGTVPESMVKEQLPKAQ- 174 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + E +A + DA D + N + + + A A Sbjct: 175 ---LTSLTNMGEAVNELQAGKVDAVHMDEPVALSYAAKNAGLAVATVSLKMKDGDANAVA 231 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 + + + +V ++ G Q + + + Sbjct: 232 LRKNSDDLKEVVDKVIQ---KLKDEGTYQSYLEKAA 264 >gi|297192144|ref|ZP_06909542.1| secreted protein [Streptomyces pristinaespiralis ATCC 25486] gi|197720210|gb|EDY64118.1| secreted protein [Streptomyces pristinaespiralis ATCC 25486] Length = 357 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 44/268 (16%), Positives = 92/268 (34%), Gaps = 12/268 (4%) Query: 16 FFTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 S + A L +I+ +G +K G + + G D+D +AL + + Sbjct: 90 GTASAAPLADKLPKEIRDKGVIKVGSDIAYAPMEFMDEGNKPAGVDIDIAKALGKVLGVE 149 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR-----EISLGLAFRPITYFDGQGF 129 Q+ + L + + + DI+ + T R E + G A + G Sbjct: 150 ---FQFENSTFDQLVLGMNNGRTDIVMSSMTDTKERQQGATEDAKGGADFVNYFKAGSAI 206 Query: 130 IMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHN-MKYHPIVFERVEEIDAAY 186 ++ K ++++ L G ++ Q GT E L + K K + ++ + Sbjct: 207 LVQKGNPKQVTTLDDLCGLTVAAQRGTANEALLKETQKKCGSDKIKEFISDQDTDSITQL 266 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + R DA D +L ++ + I +P A+ + +T+ + + Sbjct: 267 QTKRADAVITDFPVALYNELNAGGGKLFEVVGEQIDAAPYGIAVSKKNTQLRDALQAAVQ 326 Query: 247 AMVTAEELGITQKNINQVSKDTTNPDVQ 274 ++ G K S + Sbjct: 327 KIIDDGSYGEVLKEWKAESGAIEKATIN 354 >gi|293398356|ref|ZP_06642547.1| histidine-binding protein [Neisseria gonorrhoeae F62] gi|291611280|gb|EFF40364.1| histidine-binding protein [Neisseria gonorrhoeae F62] Length = 268 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 45/237 (18%), Positives = 82/237 (34%), Gaps = 11/237 (4%) Query: 37 KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96 + N F + + G+ +GFDVD A++ A KI++ F AL + Sbjct: 40 RVASNAEFAPFESLDSKGNVEGFDVDLMNAMAKA---GNFKIEFKHQPWDSLFPALNNGD 96 Query: 97 IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTT 155 D++ T R+ S+ + Q ++ K K +SS L + V G T Sbjct: 97 ADVVMSGVTITDDRKQSMDF--SDPYFEITQVVLVPKGKKVSSSDDLKKMNKVGVVTGHT 154 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS-EH 214 + +++ N FE V I D+ D + + N + Sbjct: 155 GDFSVSKLLG--NDNPKIARFENVPLIIKELENGGLDSVVSDSAVIANYVKNNPAKGMDF 212 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSKDTTN 270 V LPD + A+ +G+ +++ + + E I K + Sbjct: 213 VTLPD-FTTEHYGIAVRKGNEATVKMLNDALEKVRESGEYDKIYAKYFAKEGGQAAK 268 >gi|227487312|ref|ZP_03917628.1| glutamine ABC superfamily ATP binding cassette transporter, glutamate-binding protein [Corynebacterium glucuronolyticum ATCC 51867] gi|227092738|gb|EEI28050.1| glutamine ABC superfamily ATP binding cassette transporter, glutamate-binding protein [Corynebacterium glucuronolyticum ATCC 51867] Length = 288 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 45/281 (16%), Positives = 89/281 (31%), Gaps = 25/281 (8%) Query: 1 MYKDFF--VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + F +S L + + ST L G + G G + G Sbjct: 1 MMRRIFAIISALAVAVTATACGSTEPRSLVRSVDSGHVILGTKYDQPGLGMRNPDKTMTG 60 Query: 59 FDVDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 DV+ + + I D +I + + R +++ ++D+++ R S+ Sbjct: 61 LDVEVATYVVNHIADQRGVAHPEITWRETPSATRETVIKNGEVDMIAGTYSINASRAKSV 120 Query: 115 GLAFRPITYFDGQGFIMH-KKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYH 172 Q ++ + S+ L G +C G+T A K Sbjct: 121 NF--GGPYLLTHQALLVRSDDHTLQSLQDLDKGRKLCSVTGSTP----AQKVKKSLPGVQ 174 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL------PDIISKSPL 226 ++ A + DA T D + LY L P E ++ + Sbjct: 175 LQEYDSYSSCVEALHQKKVDAMTTDATILYGFALQ--YPGEFEVIEMTKEDGKPFTNEHY 232 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 + + D E ++ AM ++ G Q +++ + Sbjct: 233 GLGLAKDDAESTEAINDAVRAM---QDDGSFQAMVDKNLGE 270 >gi|313622703|gb|EFR93059.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria innocua FSL J1-023] Length = 247 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 49/256 (19%), Positives = 97/256 (37%), Gaps = 24/256 (9%) Query: 1 MYKDF---FVSILCLIILFFTSFST------NASILGDIKKRGFLKCGINTGLVGFAE-- 49 M K F +IL + I F+ F+T L I+++G L G++ + Sbjct: 1 MQKHVLQKFAAILLIFIFVFSGFTTVFAADTQDETLTKIQEKGVLTVGLSADYPPYEFHQ 60 Query: 50 -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + GFDV ++ + K+ +N +L++ +ID++ T Sbjct: 61 TIDGKDKVVGFDVSIAEKIAKDL---DVKLDIKEMNFDSLLGSLKTGKIDMIISGMSPTP 117 Query: 109 LREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 R+ + F Q ++ K K+ +SV+ +G + Q TT E + K Sbjct: 118 ERQKEVDF--SDPYMFVQQRVVIRKTDKEKFTSVNDFNGIKVGAQKQTTQE----ELAKN 171 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + ++V ++ ++++ DA + A + + I SK Sbjct: 172 ELVGSDVVSLQKVPDLILNLKSNKLDAVVLEGPVAEAYISQDKTLALADIKFVNGSKET- 230 Query: 227 APAIIQGDTEWYNIVS 242 A A+ +G T V+ Sbjct: 231 AIAMPKGSTALQEKVN 246 >gi|187932424|ref|YP_001887466.1| amino acid ABC transporter [Clostridium botulinum B str. Eklund 17B] gi|187720577|gb|ACD21798.1| amino acid ABC transporter [Clostridium botulinum B str. Eklund 17B] Length = 278 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 51/284 (17%), Positives = 106/284 (37%), Gaps = 29/284 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTN------------ASILGDIKKRGFLKCGINTGLVGFA 48 + K V + + + + N AS+L IK++G L G + + Sbjct: 6 LKKLGLVVAIGAMAISIVGCAGNKNTAGSKDGKETASVLEAIKQKGKLVVGTSADYPPYE 65 Query: 49 E---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105 V GFD+ ++L+ + + +Q ++ +ALQ+ ++D++ Sbjct: 66 FHKEVDGKDQIVGFDISIAKSLAEDLGVE---LQINDMDFDGLLIALQAGKVDMVFAGMT 122 Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADY 163 T R+ + I Y G I+ K I S+ L I VQ G+ E + Sbjct: 123 PTDERKENADF--SDIYYTAQHGVIVRKGEEGKIKSIDDLKDKKIGVQKGSIQERLANEK 180 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL-YALKLTNDRPSEHVILPDIIS 222 K +V ++ + ++ DA ++ + + +D +VIL D Sbjct: 181 IPDAQKK----ALGKVTDLVLDLKNNKVDAILVELPVAEFNCEKNSDIALTNVILEDSEG 236 Query: 223 KSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 S A A+ +G + + ++ T + ++ N++ + Sbjct: 237 GS--AIAMSKGSDDLKSEINKTIQKLKDEGKVDKFVIEANEMVE 278 >gi|170681491|ref|YP_001742968.1| arginine ABC transporter periplasmic arginine-binding protein ArtJ [Escherichia coli SMS-3-5] gi|170519209|gb|ACB17387.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli SMS-3-5] Length = 243 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 44/268 (16%), Positives = 92/268 (34%), Gaps = 30/268 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L ++ + G++ F + AN + GFD Sbjct: 1 MKKLVLAALLSSCAFGASAAE-------------KINFGVSATYPPFESIGANNEIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + + + + +L+ ++ D + D T R + Sbjct: 48 IDLAKALCKQMQAECT---FTNHAFDSLIPSLKFRKYDAVISGMDITPERSKQVSFT--- 101 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y++ ++ KK + + L G I ++ GTT + + D + + + ++ + Sbjct: 102 TPYYENSAVVIAKKNTYKTFADLKGKRIGMENGTTHQKYIQD----QHPEVKTVSYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR---PSEHVILPDIISKSPLAPAIIQGDTEW 237 + R D GD + + TN + +E V P L A+ + Sbjct: 158 NAFIDLKNGRIDGVFGDTAVVNEWLKTNPQLGVATEKVTDPQYFGT-GLGIAVRPDNKAL 216 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVS 265 ++ A+ G QK +Q Sbjct: 217 LEKLNNALAAIKA---DGTYQKINDQWF 241 >gi|15903294|ref|NP_358844.1| amino acid ABC transporter amino acid-binding protein [Streptococcus pneumoniae R6] gi|116516603|ref|YP_816693.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae D39] gi|15458890|gb|AAL00055.1| ABC transporter substrate-binding protein - glutamine-binding protein [Streptococcus pneumoniae R6] gi|116077179|gb|ABJ54899.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae D39] Length = 271 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 43/276 (15%), Positives = 91/276 (32%), Gaps = 23/276 (8%) Query: 1 MYKDFFVSILCLIILFF------TSFSTNASILGDIKKRGFLKCGINTGLVGF---AEVK 51 M ++ +LC + F + + + S + IK++G L + F + V Sbjct: 1 MKSKKWIFVLCNFLASFFLVACQSGSNGSQSAVEAIKQKGKLVVATSPDYAPFEFQSLVD 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G D+D +A++ + K++ ++ +LQ+ + D+ T R Sbjct: 61 GKNQVVGADIDMAQAIADELG---VKLEISSMSFDNVLTSLQTGKADLAVAGISATDER- 116 Query: 112 ISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 F Y + F++ K ++ L A+I Q GT E + + Sbjct: 117 -KEVFDFSIPYYENKISFLVRKADVEKYKDLTSLESANIAAQKGTVPESMVKEQLPKAQ- 174 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + E +A + DA D + N + + + A A Sbjct: 175 ---LTSLTNMGEAVNELQAGKVDAVHMDEPVALSYAAKNAGLAVATVSLKMKDGDANAVA 231 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 + + + +V + G Q + + + Sbjct: 232 LRKNSDDLKEVVDKVIQ---KLKNEGTYQSYLEKAA 264 >gi|323142757|ref|ZP_08077472.1| putative glutamine ABC transporter, periplasmic glutamine-binding protein GlnH [Succinatimonas hippei YIT 12066] gi|322417470|gb|EFY08089.1| putative glutamine ABC transporter, periplasmic glutamine-binding protein GlnH [Succinatimonas hippei YIT 12066] Length = 283 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 53/261 (20%), Positives = 89/261 (34%), Gaps = 21/261 (8%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 FF LC ++ TS + + K + G + F + G+ GFDVD Sbjct: 24 RFFAMGLCAAVIS-TSSAAEGGTDANNK---VWRVGCDAAFAPFTFTDSKGELIGFDVDL 79 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 RA+ + + I+ P ++ L + ID++ T R + + F Y Sbjct: 80 IRAMGKSRGVE-VSIKSYPFDS--IIPTLITDNIDLIISGFTITPER--AERVDFSDPYY 134 Query: 124 FDGQGF--IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 G F + ++ L A ICVQ GT+ + L +K F E Sbjct: 135 RCGLTFLTLTENADKYKTLEDLKDAEICVQLGTSGAVFLEKAMPNAKIK----RFNSPPE 190 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK---SPLAPAIIQGDTEWY 238 C A D +T+ R I+ I+ A+ +GD + Sbjct: 191 TYLELIGKGCAAVLNDRPVNDYFMVTSGRKD---IVSRNITTDDSEYYGIAMRKGDKQMV 247 Query: 239 NIVSWTHYAMVTAEELGITQK 259 ++V+ + E K Sbjct: 248 DLVNKALKDVQENGEFERISK 268 >gi|299536404|ref|ZP_07049716.1| histidine-binding protein precursor (Hbp) [Lysinibacillus fusiformis ZC1] gi|298727888|gb|EFI68451.1| histidine-binding protein precursor (Hbp) [Lysinibacillus fusiformis ZC1] Length = 258 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 40/257 (15%), Positives = 83/257 (32%), Gaps = 10/257 (3%) Query: 1 MYKDF--FVSILCLIILFFTSFSTNASILG-DIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M ++ ++I+ L + + D + K G + G+ Sbjct: 1 MKRNLMVLLTIMAAFTLVLAGCGSKDNTSSGDGDSKKVYKVGTEATFAPIVSLDDKGNIV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G DVD +A++ + ++++ + + F +++ + DI T R Sbjct: 61 GIDVDVLQAIADEM---DFEVKWESIGWEPVFQTIKNGETDIGGAGITITDER--KETFD 115 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F Y ++ + I S+ +L I VQ T + + + FE Sbjct: 116 FTEPYYESQLLIVVKEDSKIQSLDELKDKKISVQINATGHMAAKKLQGESSP--NIFAFE 173 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 +A GD S +Y + VI D K + +G+ E Sbjct: 174 NQPIAIQEMLNGNVEAAIGDNSVVYEYIKAHPNDKIKVIKDDSFEKEYYGFMVQKGNKEL 233 Query: 238 YNIVSWTHYAMVTAEEL 254 + ++ + +L Sbjct: 234 LDKLNEGLKKIKENGKL 250 >gi|325128657|gb|EGC51525.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria meningitidis N1568] Length = 268 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 45/220 (20%), Positives = 79/220 (35%), Gaps = 10/220 (4%) Query: 37 KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96 + N F + + G+ +GFDVD A++ A KI++ F AL + Sbjct: 40 RVASNAEFAPFESLDSKGNVEGFDVDLMNAMAKA---GNFKIEFKHQPWDSLFSALNNGD 96 Query: 97 IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTT 155 D++ T R+ S+ + Q ++ K K ISS L + V G T Sbjct: 97 ADVVMSGVTITDDRKQSMDF--SDPYFEITQVVLVPKGKKISSSEDLKKMSKVGVVTGYT 154 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS-EH 214 + +++ N FE V I D+ D + + N + Sbjct: 155 GDFSVSKLLG--NDNPKIARFENVPLIIKELENGGLDSVVSDSAVIANYVKNNPTKGMDF 212 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 V LPD + A+ +GD +++ + + E Sbjct: 213 VTLPD-FTTEHYGIAVRKGDEATVKMLNDALKKVRESGEY 251 >gi|300947050|ref|ZP_07161271.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 116-1] gi|300957064|ref|ZP_07169309.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 175-1] gi|300316149|gb|EFJ65933.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 175-1] gi|300453289|gb|EFK16909.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 116-1] Length = 260 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 45/268 (16%), Positives = 92/268 (34%), Gaps = 30/268 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L ++ + GI+ F + AN + GFD Sbjct: 18 MKKLVLAALLASFTFGASAAE-------------KINFGISATYPPFESIGANNEIVGFD 64 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + + + + +L+ ++ D + D T R + Sbjct: 65 IDLAKALCKQMQAECT---FTNHAFDSLIPSLKFRKYDAVISGMDITPERSKQVSFT--- 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y++ ++ KK + + L G I ++ GTT + + D + + + ++ + Sbjct: 119 TPYYENSAVVIAKKDTYKTFADLKGKRIGMENGTTHQKYIQD----QHPEVKTVSYDSYQ 174 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR---PSEHVILPDIISKSPLAPAIIQGDTEW 237 + R D GD + + TN + +E V P L A+ + Sbjct: 175 NAFIDLKNGRIDGVFGDTAVVNEWLKTNPQLGVATEKVTDPQYFGT-GLGIAVRPDNKAL 233 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVS 265 ++ A+ G QK +Q Sbjct: 234 LEKLNNALAAIKA---DGTYQKISDQWF 258 >gi|148989515|ref|ZP_01820874.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP6-BS73] gi|168483981|ref|ZP_02708933.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae CDC1873-00] gi|147925058|gb|EDK76139.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP6-BS73] gi|172042731|gb|EDT50777.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae CDC1873-00] Length = 271 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 44/276 (15%), Positives = 93/276 (33%), Gaps = 23/276 (8%) Query: 1 MYKDFFVSILCLIILFF------TSFSTNASILGDIKKRGFLKCGINTGLVGF---AEVK 51 M ++ +LC + F + + + S + IK++G L + F + V Sbjct: 1 MKSKKWIFVLCNFLASFFLVACQSGSNGSQSAVEAIKQKGKLVVATSPDYAPFEFQSLVD 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G D+D +A++ + K++ ++ +LQ+ + D+ T R Sbjct: 61 GKNQVVGADIDMAQAIADELG---VKLEISSMSFDNVLTSLQTGKADLAVAGISATDER- 116 Query: 112 ISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 F Y + F++ K ++ L A+I Q GT E + + Sbjct: 117 -KEVFDFSIPYYENKISFLVRKADVEKYKDLTNLESANIAAQKGTVPESMVKEQLP---- 171 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 K + E +A + DA D + N + + + A A Sbjct: 172 KVQLTSLTNMGEAVNELQAGKIDAVHMDEPVALSYAAKNAGLAVATVSLKMKDGDANAVA 231 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 + + + +V ++ G Q + + + Sbjct: 232 LRKNSDDLKEVVDKVIQ---KLKDEGTYQSYLEKAA 264 >gi|253700905|ref|YP_003022094.1| extracellular solute-binding protein family 3 [Geobacter sp. M21] gi|251775755|gb|ACT18336.1| extracellular solute-binding protein family 3 [Geobacter sp. M21] Length = 248 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 40/246 (16%), Positives = 78/246 (31%), Gaps = 19/246 (7%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 ++++ L F S + A + + V AN GFD+DF Sbjct: 5 RIMLAVVAFAGLCFASAALAAPK--------TVTVATDATWPPMEFVDANKKIVGFDIDF 56 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 A++ S + F + + Q D + + T R+ I+ Sbjct: 57 MNAVAKEAGFQAS---FKNTAWDGIFAGIAAGQYDAIISSVTITNERKAKFDFTVPYISI 113 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 GQ ++ K + + ++ L G I Q GTT + + ++ V Sbjct: 114 --GQILVVPKAEKGTKIADLKGKKIGAQIGTTGAMEIKKVA-----GVELKTYDEVGLAF 166 Query: 184 AAYRAHRCDAYTGDISALYALKL-TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A R D L + + I+ +K + +G+ E +++ Sbjct: 167 EDMAAGRISGVVCDQPTAVTYALDKKEYNKKFKIVGQPFTKEAYGIVVKKGNKELVALLN 226 Query: 243 WTHYAM 248 A+ Sbjct: 227 KGIAAV 232 >gi|227542733|ref|ZP_03972782.1| glutamate-binding protein GluB [Corynebacterium glucuronolyticum ATCC 51866] gi|227181499|gb|EEI62471.1| glutamate-binding protein GluB [Corynebacterium glucuronolyticum ATCC 51866] Length = 288 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 45/281 (16%), Positives = 89/281 (31%), Gaps = 25/281 (8%) Query: 1 MYKDFF--VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + F +S L + + ST L G + G G + G Sbjct: 1 MMRRIFAIISALAVAVTATACGSTEPRSLVRSVDSGHVILGTKYDQPGLGMRNPDKTMTG 60 Query: 59 FDVDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 DV+ + + I D +I + + R +++ ++D+++ R S+ Sbjct: 61 LDVEVATYVVNHIADQRGVAHPEITWRETPSATRETVIKNGEVDMIAGTYSINASRAKSV 120 Query: 115 GLAFRPITYFDGQGFIMH-KKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYH 172 Q ++ + S+ L G +C G+T A K Sbjct: 121 NF--GGPYLLTHQALLVRSDDHTLQSLQDLDKGRKLCSVTGSTP----AQKVKKSLPGVQ 174 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL------PDIISKSPL 226 ++ A + DA T D + LY L P E ++ + Sbjct: 175 LQEYDSYSSCVEALHQKKVDAMTTDATILYGFALQ--YPGEFEVIEMTKEDGKPFTNEHY 232 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 + + D E ++ AM ++ G Q +++ + Sbjct: 233 GLGLAKDDAESTEAINDAVRAM---QDDGSFQAMVDKNLGE 270 >gi|209695039|ref|YP_002262968.1| extracellular solute-binding protein [Aliivibrio salmonicida LFI1238] gi|208008991|emb|CAQ79219.1| extracellular solute-binding protein [Aliivibrio salmonicida LFI1238] Length = 253 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 47/265 (17%), Positives = 97/265 (36%), Gaps = 23/265 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K LCL +L S S A L DI++ G ++ G F+ ++ G+D Sbjct: 1 MQKKL----LCLSVLLAASCSAQADRLDDIQESGVIRVGTTGDYKPFSSFDGK-NYTGYD 55 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + ++ + K++ + + K L + + DI + R++ Sbjct: 56 IDVAKHIADQLG---VKLELVKTSWKNLIPDLNADKYDIAMGGITRKMQRQLHAEQTQGY 112 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 +T+ K +++ +++ + + G T E+ + AH +E Sbjct: 113 MTFGKCFLVAKGKADAFNTIDKVNMKEVRVGINIGGTNEI----FADAHLQNATFTRYEN 168 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 ++ A + D + + T+ R E +KS + +G+ E Sbjct: 169 NLDVPQAVATGKVDVMVTETPEALFYQATDKR-LEAARCETPFTKSQFGYLVPKGEQELL 227 Query: 239 NIVSWTHYAMVTAEELGITQKNINQ 263 N V++ M KNI++ Sbjct: 228 NTVNFIMDEMKL--------KNIDE 244 >gi|218438819|ref|YP_002377148.1| polar amino acid ABC transporter inner membrane protein [Cyanothece sp. PCC 7424] gi|218171547|gb|ACK70280.1| polar amino acid ABC transporter, inner membrane subunit [Cyanothece sp. PCC 7424] Length = 513 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 41/240 (17%), Positives = 75/240 (31%), Gaps = 20/240 (8%) Query: 37 KCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 K F N G+ GFD+D +A+ KI++ L ALQ+ Sbjct: 43 KVATEPAFPPFEMTDQNTGELTGFDIDLMKAIGEEAG---LKIEFESLPFDGIIPALQAG 99 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGT 154 ++ T R ++ + + G + I+S L I VQ GT Sbjct: 100 TVEAAISGMTITPERAQTISFSR--PYFKAGLAIAVRDNNNTINSFEDLKNKKIAVQIGT 157 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA-LYALKLTNDRPSE 213 T F+ + DA D LYA+K + Sbjct: 158 TGAKQA-----GQIEGVELSTFDSAVLALQELVNGKVDAVVNDAPVTLYAIKTAGLK--G 210 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 ++ +++++ A+ + + + A+ G Q Q + P++ Sbjct: 211 VKVVGELVTEEYYGIALPKDSP----YLQKINDALERLIANGRYQSIYEQWFGISP-PEL 265 >gi|188533323|ref|YP_001907120.1| histidine-binding periplasmic protein [Erwinia tasmaniensis Et1/99] gi|188028365|emb|CAO96226.1| histidine-binding periplasmic protein [Erwinia tasmaniensis Et1/99] Length = 260 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 41/269 (15%), Positives = 85/269 (31%), Gaps = 24/269 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L + + S L+ G + F A G GFD Sbjct: 1 MKKQVLALSLLMAMTAAGSAFAAGPK--------TLRIGTDPTYAPFEMKNAQGQLTGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + +K ++ + +L++K++D + + T R+ + + + Sbjct: 53 IDLANEICRRM---ETKCTFVESDFDALIPSLKAKKVDAIISSLSITAKRQQEIAFSEK- 108 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K I ++ L G +I + GTT E + ++ + P + + Sbjct: 109 -LYAANSRLIAPKGSKIEPTLDSLKGKTIGLLQGTTQETYANENWRPKGITVTPYANQDL 167 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + A R DA D A L ++ + + + + + Sbjct: 168 --VYQDLTAGRIDAAFQDEVAASEGFLKQPAGKDYAFAGPAVKDEKIFGVGTGMGLSKDN 225 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQ 263 + + A + G K + Sbjct: 226 PDLKAAID---KAFEEMRKDGTYAKLAKK 251 >gi|221069035|ref|ZP_03545140.1| extracellular solute-binding protein family 3 [Comamonas testosteroni KF-1] gi|220714058|gb|EED69426.1| extracellular solute-binding protein family 3 [Comamonas testosteroni KF-1] Length = 269 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 41/269 (15%), Positives = 81/269 (30%), Gaps = 15/269 (5%) Query: 1 MYKDFFVSILCLIILFFT-------SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M K ++ + L + S + A L G++ Sbjct: 1 MKKRTLLASVALTAILAACGKNEPASNTAAAPAPAPAAVAAKLVVGLDDNFPPMGFRDEK 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 + GFD+D R ++ ++Q+ P++ + L K++D L R+ Sbjct: 61 NELVGFDIDMAREVAKRA---NIEVQFKPIDWNAKEAELLGKRVDALWNGLTILEERKEK 117 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + + Q I+ I + + G + Q G++ L + + Sbjct: 118 ILF--SDPYMVNKQIIIVKAGSPIKGKADMVGKVVGAQEGSSAVTALTKDKELSDKFKET 175 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 +F A R D + + N +P +V+L + + Sbjct: 176 KLFGDNIAAMMDLEAGRLD--VVVVDEVVGRYYVNKKPDNYVVLAEDFGTEDYGVGFRKD 233 Query: 234 DTEWYNIVSWTHYAMVTAEELG-ITQKNI 261 D N V+ M + I QK Sbjct: 234 DEATRNKVNDVLTEMKKDGKAAEIAQKWF 262 >gi|228477062|ref|ZP_04061700.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus salivarius SK126] gi|228251081|gb|EEK10252.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus salivarius SK126] Length = 264 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 42/268 (15%), Positives = 84/268 (31%), Gaps = 14/268 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWK 57 M K F ++ L + + + IK+ L ++ F V Sbjct: 1 MKKLFLGAMALLAAVTLVACGSKKDAYESIKENKKLVVAVSPDYAPFEFKTLVDGKDQVV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G D+ +A++ + K++ ++ +LQ+ + DI T R+ + Sbjct: 61 GSDIKLAQAIADELG---VKLEVTTMSFDNVLSSLQAGKADIAISGISVTDERKKT--FD 115 Query: 118 FRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F Y I+ K SS+ G + VQ GT E K + Sbjct: 116 FSDPYYETQNAIIVRKDQESTYSSLDAFKGKKVAVQKGTIEEG----LAKKQLKDSTVVS 171 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E ++ + DA + N + + + A A+ +G+ Sbjct: 172 LTAMGEAINEVKSGQVDAVDLEKPVAEGYVAQNPDLALASVALKVDDGDAKAVAMAKGND 231 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQ 263 + V+ M K+ ++ Sbjct: 232 KLKEAVNKVIKKMKANGTYDEYIKDASK 259 >gi|255659155|ref|ZP_05404564.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Mitsuokella multacida DSM 20544] gi|260848605|gb|EEX68612.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Mitsuokella multacida DSM 20544] Length = 261 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 44/270 (16%), Positives = 85/270 (31%), Gaps = 18/270 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKK--RGFLKCGINTGLVGFAEVKANGD-WK 57 + K F + C+ + + LK G + F ++ Sbjct: 3 LKKLFVLLAACVFATLALAGCGGSDSASSGSGSSAKVLKVGSSIDFAPFEFQDEGQKEYQ 62 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D RA+ + + ++ + ALQ+K ID++ R ++ Sbjct: 63 GFDMDLIRAIGKEMGYE---VEVQNIGFDGLIPALQAKNIDVIISGMTINDER--KQNVS 117 Query: 118 FRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F Y G ++ + I S L G + VQ GTT+ + Sbjct: 118 FSDPYYQSGLTMVVRSDEQAIKSFQDLKGHKVAVQIGTTSVEAVKKL-----GGVEVKEL 172 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + H DA D + L + ++ A+ + +TE Sbjct: 173 NTPADCFMELKGHGVDAVVNDRPVNDYYITKSGETGVKA-LEEKLTAEDYGIALAKDNTE 231 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSK 266 + ++ A+ +E G K + Sbjct: 232 LQSKIN---EALKKLKENGEYDKIYAKWFG 258 >gi|91209894|ref|YP_539880.1| arginine-binding periplasmic protein 2 [Escherichia coli UTI89] gi|91071468|gb|ABE06349.1| arginine-binding periplasmic protein 2 precursor [Escherichia coli UTI89] Length = 260 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 44/268 (16%), Positives = 92/268 (34%), Gaps = 30/268 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L ++ + G++ F + AN + GFD Sbjct: 18 MKKLVLAALLASFTFGASAAE-------------KINFGVSATYPPFESIGANNEIVGFD 64 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + + + + +L+ ++ D + D T R + Sbjct: 65 IDLAKALCKQMQAECT---FTNHAFDSLIPSLKFRKYDAVISGMDITPERSKQVSFT--- 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y++ ++ KK + + L G I ++ GTT + + D + + + ++ + Sbjct: 119 TPYYENSAVVIAKKDTYKTFADLKGKRIGMENGTTHQKYIQD----QHPEVKTVSYDSYQ 174 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR---PSEHVILPDIISKSPLAPAIIQGDTEW 237 + R D GD + + TN + +E V P L A+ + Sbjct: 175 NAFIDLKNGRIDGVFGDTAVVNEWLKTNPQLGVATEKVTDPQYFGT-GLGIAVRPDNKAL 233 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVS 265 ++ A+ G QK +Q Sbjct: 234 LEKLNNALAAIKA---DGTYQKVNDQWF 258 >gi|74311404|ref|YP_309823.1| arginine 3rd transport system periplasmic binding protein [Shigella sonnei Ss046] gi|73854881|gb|AAZ87588.1| arginine 3rd transport system periplasmic binding protein [Shigella sonnei Ss046] gi|323165793|gb|EFZ51579.1| arginine-binding periplasmic protein 2 [Shigella sonnei 53G] Length = 243 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 44/268 (16%), Positives = 92/268 (34%), Gaps = 30/268 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L ++ + G++ F + AN + GFD Sbjct: 1 MKKLVLAALLASFTFGASAAE-------------KINFGVSATYPPFESIGANNEIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + + + + +L+ ++ D + D T R + Sbjct: 48 IDLAKALCKQMQAECT---FTNHAFDSLIPSLKFRKYDSVISGMDITPERSKQVSFT--- 101 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y++ ++ KK + + L G I ++ GTT + + D + + + ++ + Sbjct: 102 TPYYENSAVVIAKKDTYKTFADLKGKRIGMENGTTHQKYIQD----QHPEVKTVSYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR---PSEHVILPDIISKSPLAPAIIQGDTEW 237 + R D GD + + TN + +E V P L A+ + Sbjct: 158 NAFIDLKNGRIDGVFGDTAVVNEWLKTNPQLGVATEKVTDPQYFGT-GLGIAVRPDNKAL 216 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVS 265 ++ A+ G QK +Q Sbjct: 217 LEKLNNALAAIKA---DGTYQKINDQWF 241 >gi|317048961|ref|YP_004116609.1| cationic amino acid ABC transporter periplasmic-binding protein [Pantoea sp. At-9b] gi|316950578|gb|ADU70053.1| cationic amino acid ABC transporter, periplasmic binding protein [Pantoea sp. At-9b] Length = 260 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 45/267 (16%), Positives = 82/267 (30%), Gaps = 21/267 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L L + S L+ G + F A G GFD Sbjct: 1 MKKRVLALSLMLAMSSAASVFAAVPH--------TLRIGTDPTYPPFESKNAQGQLVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + I +K Y+ + +L++K+ID + + T R+ + + + Sbjct: 53 IDLANEICKRI---KTKCTYVESDFDALIPSLKAKKIDAIISSLSITEKRQEEIAFSEK- 108 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + K I ++ L G +I + GTT E +Y++ + P + + Sbjct: 109 -LYAANARLVAPKGSTIQPTIESLKGKNIGLLQGTTQETYANEYWRPKGVTVTPYANQDL 167 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + A R DA D L + + + + + D Sbjct: 168 --VYQDLNAGRIDAAFQDEVQASEGFLKQPVGKNYAFAGPAVKDDKIFGVGTGMGLRKDD 225 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNI 261 + + AM K Sbjct: 226 ADLKAAIDKAFDAMRKDGTYDKIAKKY 252 >gi|283796770|ref|ZP_06345923.1| extracellular solute-binding protein, family 3 [Clostridium sp. M62/1] gi|291075658|gb|EFE13022.1| extracellular solute-binding protein, family 3 [Clostridium sp. M62/1] Length = 302 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 47/310 (15%), Positives = 92/310 (29%), Gaps = 53/310 (17%) Query: 1 MYKDFFVSILCLIILF-FTSFSTNASILG------------------------------- 28 M K F + ++F T+ STNA Sbjct: 1 MKKKVFSVMTAAALVFSLTACSTNAKTEEPETAAQSSASQTEAAGAETAESSGGASAEAG 60 Query: 29 ------DIKKRG-FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 + K G G + V +G++ GFD++ ++ + + ++ Sbjct: 61 EKAASGETKAAGDTFTVGFDQDFPPMGFVGDDGEYTGFDLELAAEVADRLG-----LTFV 115 Query: 82 P--LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 P + + + L+S ID + T + + Q ++ + GI S Sbjct: 116 PQPIAWDAKNMELESGNIDCIWNGFTMT---GREDEYTWSEPYMENSQVVVVLEDSGIES 172 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L+G + VQA ++ E L + + DA D Sbjct: 173 TADLAGKIVEVQADSSAEAALKEMPELTESFAALQTTPDYNTAFMDLEMGSVDAIAMD-V 231 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 + +L IL D ++ A +G+ + V M + + + Sbjct: 232 IVAGYQLQQRD-GGFKILDDTLASEEYAIGFKKGNEALRDQVQTVLDEMASDGTMKEISE 290 Query: 260 NINQVSKDTT 269 +D T Sbjct: 291 --KWFGEDIT 298 >gi|152974180|ref|YP_001373697.1| extracellular solute-binding protein [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152022932|gb|ABS20702.1| extracellular solute-binding protein family 3 [Bacillus cytotoxicus NVH 391-98] Length = 264 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 47/289 (16%), Positives = 97/289 (33%), Gaps = 30/289 (10%) Query: 1 MYKDFFV--SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K F + + L + F + S + + ++ F + +G G Sbjct: 1 MKKKLFTVAATITLSLSFILGACSKESSTTSTDGKKEFRYAMSGLYKPFNYKENDGKLMG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLN--AKERFLALQSKQIDILSRNTDWTLLREISLGL 116 FDV+ AL+ + P+ P+ + LQ+K+ D++ + T R ++ Sbjct: 61 FDVEIGEALAKKMGMKPA-----PVTNPWETLIQGLQAKKYDVILGSMAITEERLKAVSF 115 Query: 117 AFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 Y G + K ISSV L G + V +T + + Sbjct: 116 --TKPYYRSGAQIFVSKQNDSISSVDDLKGKKVGVVKASTFKALVE------KQTDKITE 167 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 ++ R DA D + L++ + S ++ +A A+ + D Sbjct: 168 YDSDLTALMDLEPGRVDAVITD--QMVGLRMIKEGNSSIKEAGKPLNLDEMAIAVRKDDK 225 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSN 284 + V+ ++ + G +K + + LG ++ + Sbjct: 226 KMVEKVNKALDEII---KDGTYEKISKKWFG-------RNILGEEEQTK 264 >gi|49183381|ref|YP_026633.1| amino acid ABC transporter solute binding protein [Bacillus anthracis str. Sterne] gi|49476792|ref|YP_034686.1| amino acid ABC transporter periplasmic amino acid-binding protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|65317795|ref|ZP_00390754.1| COG0834: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Bacillus anthracis str. A2012] gi|165871367|ref|ZP_02216015.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0488] gi|167634261|ref|ZP_02392583.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0442] gi|167640128|ref|ZP_02398395.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0193] gi|170688342|ref|ZP_02879551.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0465] gi|170708927|ref|ZP_02899360.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0389] gi|177653666|ref|ZP_02935805.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0174] gi|190567575|ref|ZP_03020488.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis Tsiankovskii-I] gi|218901560|ref|YP_002449394.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus cereus AH820] gi|227813035|ref|YP_002813044.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. CDC 684] gi|228913105|ref|ZP_04076744.1| Amino acid ABC transporter, solute binding protein [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229602677|ref|YP_002864982.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0248] gi|254686756|ref|ZP_05150614.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. CNEVA-9066] gi|254724832|ref|ZP_05186615.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A1055] gi|254739021|ref|ZP_05196723.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. Western North America USA6153] gi|254740745|ref|ZP_05198435.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. Kruger B] gi|254756135|ref|ZP_05208164.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. Vollum] gi|254761953|ref|ZP_05213802.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. Australia 94] gi|291612199|ref|YP_003541014.1| putative amino acid ABC transporter substrate-binding protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49177308|gb|AAT52684.1| amino acid ABC transporter, solute binding protein [Bacillus anthracis str. Sterne] gi|49328348|gb|AAT58994.1| bacterial extracellular solute-binding protein, family 3; amino acid ABC transporter, periplasmic amino acid-binding protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|164712851|gb|EDR18380.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0488] gi|167511939|gb|EDR87318.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0193] gi|167530575|gb|EDR93290.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0442] gi|170126160|gb|EDS95054.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0389] gi|170667674|gb|EDT18428.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0465] gi|172081246|gb|EDT66321.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0174] gi|190561362|gb|EDV15334.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis Tsiankovskii-I] gi|218536809|gb|ACK89207.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus cereus AH820] gi|224552853|gb|ACN55065.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. 'Ames Ancestor'] gi|227004643|gb|ACP14386.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. CDC 684] gi|228846510|gb|EEM91523.1| Amino acid ABC transporter, solute binding protein [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229267085|gb|ACQ48722.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0248] Length = 264 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 50/288 (17%), Positives = 99/288 (34%), Gaps = 28/288 (9%) Query: 1 MYKDFFVSI----LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M + + LC + +A+ + KK + ++ F + +G Sbjct: 1 MKRKLLTIVASITLCTSFILGACSKESATTSSNGKK--EFRYAMSGLYKPFNYKENDGKL 58 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFDV+ AL+ + P+ I + L++K+ D++ + T R ++ Sbjct: 59 VGFDVEIGEALAKKMNMKPTPI---TNPWETLIQGLKAKKYDVILGSMAITEERLKAVNF 115 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + P Q F+ K ISS L G I V +T D H + + Sbjct: 116 SN-PYYRSGAQIFVAKKNTSISSPEDLKGKKIGVVKAST----FKDLVAKHTDQIT--EY 168 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + R DA D + L++ + S ++ + AI + D E Sbjct: 169 DSDITALMDLEPGRIDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDDKE 226 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSN 284 V+ ++ + G +K + + LG ++++ Sbjct: 227 MVEKVNKALDEII---KDGTYEKISKKWFG-------RNILGEEENTK 264 >gi|182418197|ref|ZP_02949497.1| amino acid ABC transporter, amino acid-binding protein [Clostridium butyricum 5521] gi|237666247|ref|ZP_04526234.1| extracellular solute-binding protein, family 3 [Clostridium butyricum E4 str. BoNT E BL5262] gi|182378015|gb|EDT75555.1| amino acid ABC transporter, amino acid-binding protein [Clostridium butyricum 5521] gi|237658337|gb|EEP55890.1| extracellular solute-binding protein, family 3 [Clostridium butyricum E4 str. BoNT E BL5262] Length = 272 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 52/258 (20%), Positives = 102/258 (39%), Gaps = 21/258 (8%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVDFCRALSSAIFDD 74 +S N + L IK+ G L G + + V + KGFD+D +A++ + Sbjct: 27 SSGDENKTALDKIKESGKLVVGTSADYPPYEFHATVDGKDEIKGFDIDIAQAVADDLG-- 84 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 K++ ++ +ALQ ++D++ T R+ + I Y FI+ Sbjct: 85 -VKLEIKDMDFDGLLVALQGDKVDMVFAGMTPTEERKQNADF--SDIYYTATHRFILRSG 141 Query: 135 --KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 + S L I VQ G+ E D F A N+K +V ++ + ++ D Sbjct: 142 EEGSVKSFDDLKDKKIGVQKGSIQEGIAKDNFDAANIK----SLAKVTDLVLDLKNNKVD 197 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPL---APAIIQGDTEWYNIVSWTHYAMV 249 A + + N +E + + D + A A+ +G TE V+ T + Sbjct: 198 AILIED----GVAKINCDKNEGIAMSDFVVTDEEGGSAIALKKGSTELQTEVNNTINKLK 253 Query: 250 TAEELGITQKNINQVSKD 267 + +++ + N ++ + Sbjct: 254 SEDKITKFVSDANDLAAE 271 >gi|311106035|ref|YP_003978888.1| extracellular solute-binding protein, family 3 family protein 4 [Achromobacter xylosoxidans A8] gi|310760724|gb|ADP16173.1| bacterial extracellular solute-binding protein, family 3 family protein 4 [Achromobacter xylosoxidans A8] Length = 247 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 44/236 (18%), Positives = 88/236 (37%), Gaps = 16/236 (6%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 ++ + V +G GFD++ AL+ A+ K++++ ++ K ALQ+ Sbjct: 28 TIRAVTDATFPPMEFV-KDGKRTGFDIELVEALAGAMGK---KVEWIDIDFKGLIPALQA 83 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 + DI T R + Y G + K + ++ L G + VQ GT Sbjct: 84 GRADIAVSAIYITPERAKVVDF--TDPYYAGGLVVMTKKDGPVKTLKDLDGRKVSVQVGT 141 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 + L +++ A + E+ +E+ + R +A A KL + Sbjct: 142 KSVNYLKEHYPA----VQRVEVEKNQEMFNLVQIGRAEAAVTGKP---AAKLFAQSTPDL 194 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 +L D I+ A+ + E ++ A+ + G Q +N+ + Sbjct: 195 TVLNDQITTEDYGIAVPKNKPELTRELN---AALQKLKADGSYQAIVNKWFEAPAK 247 >gi|228995721|ref|ZP_04155384.1| Amino acid ABC transporter, solute binding protein [Bacillus mycoides Rock3-17] gi|228764098|gb|EEM12982.1| Amino acid ABC transporter, solute binding protein [Bacillus mycoides Rock3-17] Length = 271 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 46/270 (17%), Positives = 92/270 (34%), Gaps = 24/270 (8%) Query: 1 MYKDFFV--SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K + + L + F + + + K+ + ++ F + +G G Sbjct: 11 MRKKMLTVFAAITLCVSFVLGACSKETSTNEGKE---FRYAMSGLYKPFNFKENDGKLVG 67 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLN--AKERFLALQSKQIDILSRNTDWTLLREISLGL 116 FDV+ AL+ + P +P+ + L++K+ D++ + T R ++ Sbjct: 68 FDVEIGEALAKKMGMKP-----VPVTNPWETLIQGLKAKKYDVILGSMAITEDRLKAVNF 122 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 P Q F+ K ISSV L G I V +T + + + Sbjct: 123 TN-PYYRSGAQIFVAKKNNSISSVEDLKGKKIGVVKASTFKTLVE------KHTDQITEY 175 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + R DA D + L++ + S ++ + AI + D E Sbjct: 176 DSDITALMDLEPGRVDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLEEMGIAIRKDDKE 233 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSK 266 V+ ++ + G +K + Sbjct: 234 MVKKVNKALEEII---KDGTYEKISKKWFG 260 >gi|258405217|ref|YP_003197959.1| extracellular solute-binding protein family 3 [Desulfohalobium retbaense DSM 5692] gi|257797444|gb|ACV68381.1| extracellular solute-binding protein family 3 [Desulfohalobium retbaense DSM 5692] Length = 247 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 53/263 (20%), Positives = 94/263 (35%), Gaps = 23/263 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + +LCL + T+ S A L +T + F K +G++ GFD Sbjct: 1 MRIVTRILLLCLAAVVMTAGSLQAKTL---------TVACDTNFMPFEF-KKDGEYVGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D ++ + D + P++ ALQ+ +D RE + + Sbjct: 51 IDIWDTIAQDLGLD---YKLQPMDFNGIIPALQTGNVDAAIAAITIKSTREEVVDFSH-- 105 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G I+ I +S L + + GTT+ ADY + + +F + Sbjct: 106 PYYDAGLRVIVSADNNSIKGLSDLDDKIVATKIGTTS----ADYARENMDAKDVKLFPNI 161 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R DA D A+ T + + V+ P + A QG ++ Sbjct: 162 DAAYMELRTGGADAVLFDAPAVMYYANTAGKGAVKVVGP-LYQGQSYGIAFPQG-SDLRE 219 Query: 240 IVSWTHYAMVTAEELG-ITQKNI 261 V+ M+ + E I +K Sbjct: 220 KVNIALLKMIESGEYAEIYEKWF 242 >gi|89001383|gb|ABD59216.1| InkU [Nonomuraea longicatena] Length = 272 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 43/247 (17%), Positives = 84/247 (34%), Gaps = 15/247 (6%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 + ++ + L G +G +GFDVD R L + ++P+ A Sbjct: 27 TGDGVLSADTVRVAVRVDLPGIGARGPSGAVEGFDVDVARYLVGKLGKKAV---FVPVTA 83 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLS 144 +R L S + D++ T R+ + A Q ++ + + I +V L+ Sbjct: 84 ADREKVLTSGRADMVLATFSITQDRKERVLFA--GPYQLSYQDILVRRGETRIKNVRDLA 141 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G SIC G+ + + + + F+ + DA T + L L Sbjct: 142 GRSICEVKGSNAGQRVVE---ERKVAARLVPFDSYGPCMERLLSGEVDAVTTNDVILAGL 198 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 + ++ ++ + GD E V+ M + G +K + + Sbjct: 199 AAESSG---LRLVNAQFNEQRTGVGMRLGDVEGCEAVNRAITGMY---QDGTAKKLLKKW 252 Query: 265 SKDTTNP 271 T P Sbjct: 253 FGKTDLP 259 >gi|294102238|ref|YP_003554096.1| extracellular solute-binding protein family 3 [Aminobacterium colombiense DSM 12261] gi|293617218|gb|ADE57372.1| extracellular solute-binding protein family 3 [Aminobacterium colombiense DSM 12261] Length = 258 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 46/267 (17%), Positives = 98/267 (36%), Gaps = 16/267 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + IL +I+ + + A+ + R ++ G F + G+D Sbjct: 1 MLKTSKIFILSVIMSLIVAAPSLAA--KSVMDRTVIRVGTEATYPPFEYRSEKNEIVGYD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + + D ++ + ++ AL + +ID+++ T R + Sbjct: 59 IDVVKALGAHLGKD---VELVDMSFDGLIPALLTGKIDMIAAGMTNTEERRKKVDF--SD 113 Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Y F+ + IS + L+ VQ GT ++ + + + F++ Sbjct: 114 VYYEIENAFVTKSDDESISKIEDLADKVATVQIGTAQDIFITN----TKLPKEIKRFQKN 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI----ISKSPLAPAIIQGDT 235 ++ R D +++ A ND + + +A AI +GDT Sbjct: 170 DDALREVLLGRSDFCVVNLTVANAYLRNNDAFGSTLKIAFRNFIHKQGEGIALAIPKGDT 229 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNIN 262 + ++ M + EL +K Sbjct: 230 TFQEALNKVLDEMKKSGELLGLKKKYQ 256 >gi|330829209|ref|YP_004392161.1| amino acid ABC transporter amino acid-binding protein [Aeromonas veronii B565] gi|328804345|gb|AEB49544.1| Amino acid ABC transporter amino acid-binding protein [Aeromonas veronii B565] Length = 260 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 51/272 (18%), Positives = 96/272 (35%), Gaps = 25/272 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M +S L + L T K+ ++ G+ F+ A+G+ KGFD Sbjct: 2 MKIRLTLSALFVASLLATPAMA--------KEWKTVRFGVEGAYPPFSWTDASGEIKGFD 53 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + K + + + AL S++ D + T R + + Sbjct: 54 IDLANALCQQM---AVKCELVAQDWDGMIPALLSRKYDAIIAAMSITDERRQKVDFTEKY 110 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + F+ K ++ + ++G I VQ TT + L D F ++ + + Sbjct: 111 AHIPN--RFVAAKGTELTLTPEGMAGKRIGVQRATTHDKYLTDNFGSN---VTIVRYGNA 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234 +E +A R A D SA+ L + + + ++ + A+ + D Sbjct: 166 DEAYLDLKAGRVLALLADASAIEQGLLGKEGGDKFDYVGPALTDRQWFGDGMGIAVRKSD 225 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 E + A GI Q+ + K Sbjct: 226 KELKGKLDEAIKA---LRANGIYQQINQKYFK 254 >gi|325293281|ref|YP_004279145.1| arginine-binding periplasmic protein [Agrobacterium sp. H13-3] gi|325061134|gb|ADY64825.1| arginine-binding periplasmic protein [Agrobacterium sp. H13-3] Length = 257 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 46/262 (17%), Positives = 87/262 (33%), Gaps = 22/262 (8%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 ++ I F+ + + G F ++A+G GFD+D Sbjct: 6 RLLAAVSIAAISLFSGAALAQD---------KIVIGTEGAYPPFNNLEADGTLTGFDIDI 56 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 +AL + + + ++ + ALQ+K+ D + + T R + + + Y Sbjct: 57 AKALCVEMKAECT---FVTNDWDGIIPALQAKKFDAIIASMSITPERLQKVDFSKK--YY 111 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 + K I SV L G S+ Q TT +F ++K +P +E Sbjct: 112 NTPPAIAVPKDSPIKSVDDLKGKSLGAQGSTTHSNYAEKHFPGSDLKMYP----TADEYK 167 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTEWYN 239 R DA DI L ++ ++ P + A+ +GDT + Sbjct: 168 LDISNGRIDAVIDDIVVLSEWLKSDAGKCCKILTPLPVDVEINGNGAGVAVRKGDTALAD 227 Query: 240 IVSWTHYAMVTAEELGITQKNI 261 + + + K Sbjct: 228 KFTAAIAGIRANGKYQEINKKY 249 >gi|167625394|ref|YP_001675688.1| extracellular solute-binding protein [Shewanella halifaxensis HAW-EB4] gi|167355416|gb|ABZ78029.1| extracellular solute-binding protein family 3 [Shewanella halifaxensis HAW-EB4] Length = 245 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 53/271 (19%), Positives = 94/271 (34%), Gaps = 31/271 (11%) Query: 1 MYKDFFV--SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANG-DW 56 M K V S+ L T K L G N F V A+G + Sbjct: 1 MKKSVLVLASLGLTGALMLTGCG---------KSDDVLVVGTNASFPPFEYVGGASGDEI 51 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFD+D R ++ K++ +N +AL + ++D ++ T R+ S+ Sbjct: 52 MGFDIDLARQIAKDA-GKTLKVE--NMNFDSLIVALNAGKVDFIASGMTITPERQASVNF 108 Query: 117 AFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + Y Q +++K I+S+ L I VQ G+T ++ Y Sbjct: 109 SE--PYYEATQMVLVNKDNNSINSLDDLKDKHIAVQLGSTGDIMAKSY------SQQVTA 160 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F E + + D D A+ P + ++ S A+ + Sbjct: 161 FNSGFEAVMELKNAKVDLVLFDSE--PAISFLEKNP-QLKMVELDFSPEFYGFAVAKDKV 217 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 E N ++ + T ++ G +N+ K Sbjct: 218 ELLNSINTSLS---TMKQNGGYDAIVNKHMK 245 >gi|187730469|ref|YP_001880943.1| arginine ABC transporter periplasmic arginine-binding protein ArtJ [Shigella boydii CDC 3083-94] gi|187427461|gb|ACD06735.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Shigella boydii CDC 3083-94] Length = 243 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 44/268 (16%), Positives = 92/268 (34%), Gaps = 30/268 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L ++ + G++ F + AN + GFD Sbjct: 1 MKKLVLAALLASFTFGASAAE-------------KINFGVSATYPPFESIGANNEIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + + + + +L+ ++ D + D T R + Sbjct: 48 IDLAKALCKQMQAECT---FTNHAFDSLIPSLKFRKYDAVISGMDITPERSKQVSFT--- 101 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y++ ++ KK + + L G I ++ GTT + + D + + + ++ + Sbjct: 102 TPYYENSAVVIAKKDTYKAFADLKGKRIGMENGTTHQKYIQD----QHPEVKTVSYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR---PSEHVILPDIISKSPLAPAIIQGDTEW 237 + R D GD + + TN + +E V P L A+ + Sbjct: 158 NAFIDLKNGRIDGVFGDTAVVNEWLKTNPQLGVATEKVTDPQYFGT-GLGIAVRPDNKAL 216 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVS 265 ++ A+ G QK +Q Sbjct: 217 LEKLNNALAAIKA---DGTYQKINDQWF 241 >gi|259907901|ref|YP_002648257.1| Histidine-binding periplasmic protein [Erwinia pyrifoliae Ep1/96] gi|224963523|emb|CAX55013.1| Histidine-binding periplasmic protein [Erwinia pyrifoliae Ep1/96] gi|283477778|emb|CAY73694.1| Histidine ABC transport system, periplasmic component [Erwinia pyrifoliae DSM 12163] gi|310768188|gb|ADP13138.1| Histidine-binding periplasmic protein [Erwinia sp. Ejp617] Length = 260 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 43/269 (15%), Positives = 86/269 (31%), Gaps = 24/269 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L + I S L+ G + F A G GFD Sbjct: 1 MKKQVLALSLLMAITAAGSAFAAGPK--------TLRIGTDPTYAPFEMKNAQGQLTGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + +K ++ + +L++K++D + + T R+ + + + Sbjct: 53 IDLANEICQRM---ETKCTFVESDFDALIPSLKAKKVDAIISSLSITAKRQQEIAFSEK- 108 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K I +++ L G +I + GTT E ++ + P + + Sbjct: 109 -LYAANSRLIAPKGSKIEPTLASLKGKTIGLLQGTTQETYANQNWRPKGVTVTPYANQDL 167 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + A R DA D A L ++ + + + + + Sbjct: 168 --VYQDLTAGRIDAAFQDEVAASEGFLKQPAGKDYAFAGPAVKDENIFGVGTGIGLSKDN 225 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQ 263 E + + A + G K + Sbjct: 226 PELKSAID---KAFDEMRKDGTYAKLAKK 251 >gi|254425157|ref|ZP_05038875.1| Bacterial extracellular solute-binding protein, family 3 [Synechococcus sp. PCC 7335] gi|196192646|gb|EDX87610.1| Bacterial extracellular solute-binding protein, family 3 [Synechococcus sp. PCC 7335] Length = 263 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 50/274 (18%), Positives = 88/274 (32%), Gaps = 24/274 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRG--FLKCGINTGLVGFAEVKANGDWKGFD 60 K ++I +L G G F V +G+ +GFD Sbjct: 11 KSAVLAICTAGLLVACGGGGGEDASD-----GGDVFSVGTEPAFPPFESVGDDGELQGFD 65 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D RA+ +++ L ALQ ID T R ++ Sbjct: 66 IDLMRAIGEKAGKT---VEFESLPFDGLIPALQGASIDAAISGMTITEERADTVDF--SD 120 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G + + I+++ L G I VQ GTT T A +A F+ Sbjct: 121 PYFKAGLAIAVAEGDTEINTLDDLEGKRIAVQIGTTGAETAAGVPEA-----EVSTFDSA 175 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 DA D A T + P V+ +++++ A+ +G + Sbjct: 176 PLALQELANGNVDAVVNDAPATLDAIATGNIPGITVV-GELLTEEFYGIAMPKGSED--- 231 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 V + A+ + G + + D P++ Sbjct: 232 -VETVNTALSELIDDGTYAEIYRKWF-DAEPPEL 263 >gi|288555161|ref|YP_003427096.1| glutamine ABC transporter substrate-binding protein [Bacillus pseudofirmus OF4] gi|288546321|gb|ADC50204.1| glutamine ABC transporter substrate-binding protein [Bacillus pseudofirmus OF4] Length = 267 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 51/280 (18%), Positives = 99/280 (35%), Gaps = 25/280 (8%) Query: 1 MYKDFFVSILCLIILFF--------TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 M K ++ S++ +L TS + + +R + V F + Sbjct: 1 MKKSYWKSVVFGGLLLVATACGSEDTSSEADNGAAAEDGERESYVVATDNAYVPFEFLDE 60 Query: 53 -NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G+ GFD+D A++ D I++ + + S + DI T R+ Sbjct: 61 ETGELVGFDIDLMTAIAEEAGFD---IEFEAMEFDGIVAGIGSGRFDIGIAGMTITEERK 117 Query: 112 ISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 ++ + Y G +H I+SV L G + + G+T+E + + N Sbjct: 118 ENIDFSQ--PYYDAGLIVAVHADNDEINSVDDLDGKVVATRTGSTSETYIRE-----NTG 170 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 P F ++ E R DA DI + T + + + + ++ A Sbjct: 171 GTPEAFPQITEAYQNVIQGRADAVIYDIPNVQYYAST-EGGGQLKTVGEALTGEEYGIAF 229 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 +G +E +I A+ T +E G + + + Sbjct: 230 PKG-SELRDIAD---EALTTLKENGTYADLYEKWFGERPD 265 >gi|226330763|ref|ZP_03806281.1| hypothetical protein PROPEN_04683 [Proteus penneri ATCC 35198] gi|225201558|gb|EEG83912.1| hypothetical protein PROPEN_04683 [Proteus penneri ATCC 35198] Length = 244 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 50/266 (18%), Positives = 95/266 (35%), Gaps = 26/266 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F ++L I L T+ ++ F + AN GFD Sbjct: 1 MKKILFAALLTSITLSATAAEKE-----------TIRFATEATYPPFEMIDANNQIVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A+ + I D + + + +L+ ++ + L D T R+ + Sbjct: 50 VDLANAMCAKINADCT---FTNQSFDSLIPSLKFRRFEALMAGIDITPERQKQVDFTDS- 105 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+D + K IS V+ L G I VQ GTT + + + + + + ++ + Sbjct: 106 --YYDNSAVFITVKGKISDVANLKGKQIGVQNGTTHQKFINE----QHKEMKTVPYDSYQ 159 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR---PSEHVILPDIISKSPLAPAIIQGDTEW 237 + R +A GD + + N + V P+ LA A+ +G+ + Sbjct: 160 NAVLDLKNGRIEAIFGDTAVVNEWLKKNPELGIVGDKVADPNYFGT-GLAIAVRKGNADL 218 Query: 238 YNIVSWTHYAMVTAEELG-ITQKNIN 262 + ++ + I +K Sbjct: 219 QDKLNKALAEVKADGTYDVIYKKWFE 244 >gi|322373403|ref|ZP_08047939.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus sp. C150] gi|321278445|gb|EFX55514.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus sp. C150] Length = 270 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 39/262 (14%), Positives = 88/262 (33%), Gaps = 17/262 (6%) Query: 1 MY--KDFFVSILCLIIL-FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANG 54 M K + + + L + S++ + L +K +G L +N F Sbjct: 1 MKTWKKLLLGLTGVFALTALAACSSSNNTLDKVKDKGTLTVALNPHFAPFEFKTLQDGKD 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G DV+ +A++ + K+++ ++ ++QS + DI T R+ + Sbjct: 61 TVVGADVEIAKAIADELG---VKVKFSEMSFDNVLASVQSGKADIAISGISATKERQKT- 116 Query: 115 GLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 F Y ++ K S + S+ VQ G+ E K++ + Sbjct: 117 -FDFSDTYYESETVLVVKKDDTGTYKQTSDFAKKSVAVQKGSIQEKI----AKSNLSDAN 171 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + + E ++ + + + + N + I S A A+ + Sbjct: 172 VVALSQPGEAINELKSGQVNGVVLEKAIAQGYVEQNSDLAVSDIKLKSDSNDAYAVAMPK 231 Query: 233 GDTEWYNIVSWTHYAMVTAEEL 254 G + V+ + ++ Sbjct: 232 GSDKLKAKVNKVITKLKKEGKI 253 >gi|300902393|ref|ZP_07120376.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 84-1] gi|301305368|ref|ZP_07211463.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 124-1] gi|300405540|gb|EFJ89078.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 84-1] gi|300839386|gb|EFK67146.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 124-1] gi|315257896|gb|EFU37864.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 85-1] Length = 260 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 45/268 (16%), Positives = 92/268 (34%), Gaps = 30/268 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L ++ + GI+ F + AN + GFD Sbjct: 18 MKKLVLAALLASFTFGASAAE-------------KINFGISATYPPFESIGANNEIVGFD 64 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + + + + +L+ ++ D + D T R + Sbjct: 65 IDLAKALCKQMQAECT---FTNHAFDSLIPSLKFRKYDAVISGMDITPERSKQVSFT--- 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y++ ++ KK + + L G I ++ GTT + + D + + + ++ + Sbjct: 119 TPYYENSAVVIAKKDTYKTFADLKGKRIGMENGTTHQKYIQD----QHPEVKTVSYDSYQ 174 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR---PSEHVILPDIISKSPLAPAIIQGDTEW 237 + R D GD + + TN + +E V P L A+ + Sbjct: 175 NAFIDLKNGRIDGVFGDTAVVNEWLKTNPQLGVATEKVTDPQYFGT-GLGIAVRPDNKAL 233 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVS 265 ++ A+ G QK +Q Sbjct: 234 LEKLNNALAAIKA---DGTYQKINDQWF 258 >gi|55823258|ref|YP_141699.1| ABC transporter substrate binding protein [Streptococcus thermophilus CNRZ1066] gi|55739243|gb|AAV62884.1| ABC transporter substrate binding protein [Streptococcus thermophilus CNRZ1066] Length = 270 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 42/271 (15%), Positives = 99/271 (36%), Gaps = 21/271 (7%) Query: 1 MYKDFFVSILCLIILFFTS-----FSTNASILGDIKKR----GFLKCGINTGLVGFAEVK 51 M K +I+ +I + + ++ + + K L+ + Sbjct: 1 MKKKSIFAIVGIIFIAVIAYFGYQTASGSKTTQTVSKSSSNEKVLRVATTGVSFPGSYKD 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 +NGD GFDV+ RA+ I K++++ + F LQS ++D ++ + T R+ Sbjct: 61 SNGDLTGFDVEIARAVGKKIGY---KVEFITTSFDGLFGLLQSGKVDAVASSIAITDERQ 117 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 S T+ G ++ K +++++++ G ++ G+ + Y + Sbjct: 118 KSYDFTTPYATF--QYGVVVKKDSSLTNINEIGGHTLAATVGSNQIKVVNAY----DPSI 171 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 F+ E + D Y+ + L A+ + + IL + + +A A Sbjct: 172 QIQTFDDREAALTGVTNGQVDGYSNSKTILSAIIKQKN--LDLKILDGELGQENIAIAFN 229 Query: 232 Q-GDTEWYNIVSWTHYAMVTAEELGITQKNI 261 + + + + ++ + K Sbjct: 230 KGKNKDLREKADKSVEELIKDGTVSKLSKKY 260 >gi|159186207|ref|NP_356123.2| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|159141341|gb|AAK88908.2| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 279 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 40/251 (15%), Positives = 91/251 (36%), Gaps = 14/251 (5%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 F +A+ + + K +G + GI + V ++G G D D +A + + Sbjct: 25 FVAPVDASAATVEEAKAKGKVVIGIQGDNSPWGFVNSSGVQDGLDADIGKAFADYLG--- 81 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 K++++PL R AL + ++D+L T R S+ + K K Sbjct: 82 VKVEFVPLAVANRIPALLTGKVDVLFATMAMTAERAKSIQY--SKPYVGNVFSVYGPKDK 139 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I+ L+ ++ V + + + K + + F+ A + + +A Sbjct: 140 KIAGFDDLTSLNVGVPKSSAMDTAITA---GAGSKANILRFDDDAANIQALISGQVEAVG 196 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 G++ Y +L ++ ++ G+ +W ++ + + +L Sbjct: 197 GNM--FYGDRLNKAAEGKYE-SKFDLTTMYNGAGTRPGEKDWNETINAFLDKIKSDGQL- 252 Query: 256 ITQKNINQVSK 266 K ++ K Sbjct: 253 --AKIYDKWMK 261 >gi|332162248|ref|YP_004298825.1| arginine-binding periplasmic protein 2 precursor [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318606311|emb|CBY27809.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Yersinia enterocolitica subsp. palearctica Y11] gi|325666478|gb|ADZ43122.1| arginine-binding periplasmic protein 2 precursor [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330860382|emb|CBX70692.1| arginine-binding periplasmic protein 2 [Yersinia enterocolitica W22703] Length = 249 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 50/268 (18%), Positives = 94/268 (35%), Gaps = 24/268 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +IL ++ T+ T S ++ + F + AN + GFD Sbjct: 1 MKKLLLAAILSGMVFSATAAETTHSTE-------TIRFAASATYPPFESIGANNEIVGFD 53 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + + + + AL+ K+ D + D T R + + Sbjct: 54 MDLAKALCKQMEANCT---FTNQAFDSLIPALKFKRYDAVISGMDITPERSKQVAFSQ-- 108 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+ ++ K SS + L G I ++ GTT + L D + + + ++ + Sbjct: 109 -PYYANSAIVIAPKGKFSSFADLKGKKIGMENGTTHQKYLQD----KHPEIQTVAYDSYQ 163 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR---PSEHVILPDIISKSPLAPAIIQGDTEW 237 + R D GD + + TN EHV P L A+ +T Sbjct: 164 NAIIDLKNGRIDGVFGDTAVVNEWLKTNPNLAAVGEHVTDPQYFGT-GLGIAVRPDNTAL 222 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVS 265 ++ A+ G + ++ Sbjct: 223 LEKLNKAIDAVKA---DGTYKAINDKWF 247 >gi|228989528|ref|ZP_04149513.1| Amino acid ABC transporter, solute binding protein [Bacillus pseudomycoides DSM 12442] gi|228770253|gb|EEM18832.1| Amino acid ABC transporter, solute binding protein [Bacillus pseudomycoides DSM 12442] Length = 271 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 46/270 (17%), Positives = 92/270 (34%), Gaps = 24/270 (8%) Query: 1 MYKDFFVS--ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K + + L + F + + + K+ + ++ F + +G G Sbjct: 11 MRKKILTAFAAITLCVSFVLGACSKETSTNEGKE---FRYAMSGLYKPFNFKENDGKLVG 67 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLN--AKERFLALQSKQIDILSRNTDWTLLREISLGL 116 FDV+ AL+ + P +P+ + L++K+ D++ + T R ++ Sbjct: 68 FDVEIGEALAKKMGMKP-----VPVTNPWETLIQGLKAKKYDVILGSMAITEDRLKAVNF 122 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 P Q F+ K ISSV L G I V +T + + + Sbjct: 123 TN-PYYRSGAQIFVAKKNNSISSVEDLKGKKIGVVKASTFKKLVE------KHTDQITEY 175 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + R DA D + L++ + S ++ + AI + D E Sbjct: 176 DSDITALMDLEPGRVDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLEEMGIAIRKDDKE 233 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSK 266 V+ ++ + G +K + Sbjct: 234 MVKKVNKALEEII---KDGTYEKISKKWFG 260 >gi|227872731|ref|ZP_03991056.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Oribacterium sinus F0268] gi|227841426|gb|EEJ51731.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Oribacterium sinus F0268] Length = 286 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 49/278 (17%), Positives = 90/278 (32%), Gaps = 37/278 (13%) Query: 1 MYKDFFVSILCLIILFF----------TSFSTNASILGDIKKRG--------------FL 36 M K ++ L + L T+ + A + RG L Sbjct: 11 MKKYLLIAALAGLSLVACGGSKGSTEGTAKGSEAGTEQGNQARGSKETDSAKAEAKGGTL 70 Query: 37 KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96 N + + D G DVD A++ + K++ + A+QS + Sbjct: 71 IMATNAEFPPYEYHEGK-DIVGIDVDIAEAIAEEMG---MKLEISDIAFDAIIPAVQSGK 126 Query: 97 IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT 156 D + R ++ + T Q I+ + IS + L G + VQ GTT Sbjct: 127 ADFGAAGMTVNEDRLKNVDFSDSYAT--SVQSVIVTEDSSISKIDDLKGKKVGVQQGTTG 184 Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216 +L D + F + + A +A + DA D + N + Sbjct: 185 DLYSTDDLGEKS----VERFPKGADAVQALQAGKVDAVIIDKNPAEVFVSQNKG---LKL 237 Query: 217 LPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 L ++ A + +G+TE ++ + +L Sbjct: 238 LDSAYAEEDYAICVKKGNTELVEKINAALKKLKDNGKL 275 >gi|293414141|ref|ZP_06656790.1| arginine ABC transporter [Escherichia coli B185] gi|291434199|gb|EFF07172.1| arginine ABC transporter [Escherichia coli B185] Length = 243 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 43/268 (16%), Positives = 92/268 (34%), Gaps = 30/268 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L ++ + G++ F + AN + GFD Sbjct: 1 MKKLVLAALLASFTFGASAAE-------------KINFGVSATYPPFESIGANNEIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + + + + +L+ ++ D + D T R + Sbjct: 48 IDLAKALCKQMQAECT---FTNHAFDSLIPSLKFRKYDAVISGMDITPERSKQVSFT--- 101 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y++ ++ KK + + L G I ++ GTT + + D + + + ++ + Sbjct: 102 TPYYENSAVVIAKKDTYKTFADLKGKRIGMENGTTHQKYIQD----QHPEVKTVSYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR---PSEHVILPDIISKSPLAPAIIQGDTEW 237 + R D GD + + TN + +E V P L A+ + Sbjct: 158 NAFIDLKNGRIDGVFGDTAVVNEWLKTNPQLGVATEKVTDPQYFGT-GLGIAVRPDNKAL 216 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVS 265 ++ A+ G Q+ +Q Sbjct: 217 LEKLNNALAAIKA---DGTYQQISDQWF 241 >gi|229003348|ref|ZP_04161178.1| Amino acid ABC transporter, solute binding protein [Bacillus mycoides Rock1-4] gi|228757966|gb|EEM07181.1| Amino acid ABC transporter, solute binding protein [Bacillus mycoides Rock1-4] Length = 271 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 46/270 (17%), Positives = 92/270 (34%), Gaps = 24/270 (8%) Query: 1 MYKDFFV--SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K + + L + F + + + K+ + ++ F + +G G Sbjct: 11 MRKKILTVFAAITLCVSFVLGACSKETSTNEGKE---FRYAMSGLYKPFNFKENDGKLVG 67 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLN--AKERFLALQSKQIDILSRNTDWTLLREISLGL 116 FDV+ AL+ + P +P+ + L++K+ D++ + T R ++ Sbjct: 68 FDVEIGEALAKKMGMKP-----VPVTNPWETLIQGLKAKKYDVILGSMAITEDRLKAVNF 122 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 P Q F+ K ISSV L G I V +T + + + Sbjct: 123 TN-PYYRSGAQIFVAKKNNSISSVEDLKGKKIGVVKASTFKTLVE------KHTDQITEY 175 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + R DA D + L++ + S ++ + AI + D E Sbjct: 176 DSDITALMDLEPGRVDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLEEMGIAIRKDDKE 233 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSK 266 V+ ++ + G +K + Sbjct: 234 MVKKVNKALEEII---KDGTYEKISKKWFG 260 >gi|225859159|ref|YP_002740669.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae 70585] gi|225721945|gb|ACO17799.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae 70585] Length = 271 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 44/276 (15%), Positives = 92/276 (33%), Gaps = 23/276 (8%) Query: 1 MYKDFFVSILCLIILFF------TSFSTNASILGDIKKRGFLKCGINTGLVGF---AEVK 51 M ++ +LC + F + + + S + IK++G L + F + V Sbjct: 1 MKSKKWIFVLCNFLASFFLVACQSGSNGSQSAVDAIKQKGKLVVATSPDYAPFEFQSLVD 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G D+D +A++ + K++ L ++ +LQ+ + D+ T R Sbjct: 61 GKNQVVGADIDMAQAIADELG---VKLEILSMSFDNVLTSLQTGKADLAVAGISATDER- 116 Query: 112 ISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 F Y + F++ K ++ L A+I Q GT E + Sbjct: 117 -KEVFDFSIPYYENKISFLVRKADVEKYKDLTSLESANIAAQKGTVPESMVKAQLPKAQ- 174 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + E +A + DA D + N + + + A A Sbjct: 175 ---LTSLTNMGEAVNELQAGKIDAVHMDEPVALSYAAKNAGLAVATVSLKMKDGDANAVA 231 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 + + + +V ++ G Q + + + Sbjct: 232 LRKNSDDLKEVVDKVIQ---KLKDEGTYQSYLEKAA 264 >gi|182684353|ref|YP_001836100.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae CGSP14] gi|303254549|ref|ZP_07340653.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae BS455] gi|303258989|ref|ZP_07344968.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP-BS293] gi|303261673|ref|ZP_07347620.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP14-BS292] gi|303264342|ref|ZP_07350262.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae BS397] gi|303265859|ref|ZP_07351756.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae BS457] gi|303268192|ref|ZP_07353991.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae BS458] gi|182629687|gb|ACB90635.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae CGSP14] gi|301802134|emb|CBW34871.1| putative extracellular amino acid-binding protein [Streptococcus pneumoniae INV200] gi|302598517|gb|EFL65559.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae BS455] gi|302637253|gb|EFL67741.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP14-BS292] gi|302639932|gb|EFL70388.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP-BS293] gi|302642271|gb|EFL72619.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae BS458] gi|302644594|gb|EFL74844.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae BS457] gi|302646154|gb|EFL76381.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae BS397] Length = 271 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 43/276 (15%), Positives = 92/276 (33%), Gaps = 23/276 (8%) Query: 1 MYKDFFVSILCLIILFF------TSFSTNASILGDIKKRGFLKCGINTGLVGF---AEVK 51 M ++ +LC + F + + + S + IK++G L + F + V Sbjct: 1 MKSKKWIFVLCNFLASFFLVACQSGSNGSQSAVDAIKQKGKLVVATSPDYAPFEFQSLVD 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G D+D +A++ + K++ ++ +LQ+ + D+ T R Sbjct: 61 GKNQVVGADIDMAQAIADELG---VKLEISSMSFDNVLTSLQTGKADLAVAGISATDER- 116 Query: 112 ISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 F Y + F++ K ++ L A+I Q GT E + + Sbjct: 117 -KEVFDFSIPYYENKISFLVRKADVEKYKDLTSLESANIAAQKGTVPESMVKEQLP---- 171 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 K + E + + DA D + N + + + A A Sbjct: 172 KVQLTSLTNMGEAVNELQTGKIDAVHMDEPVALSYAAKNAGLAVATVSLKMKDGDANAVA 231 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 + + + +V ++ G Q + + + Sbjct: 232 LRKNSDDLKEVVDKVIQ---KLKDEGTYQSYLEKAA 264 >gi|149181554|ref|ZP_01860049.1| Arginine-binding protein [Bacillus sp. SG-1] gi|148850804|gb|EDL64959.1| Arginine-binding protein [Bacillus sp. SG-1] Length = 251 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 48/264 (18%), Positives = 96/264 (36%), Gaps = 14/264 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + ++ + T+ G+ K++ + G + F NG+ GFD Sbjct: 1 MKKLFAGLMAVVVAGSLAACGTSEETSGEGKEK--IIMGTSADFPPFETRDNNGEIIGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + ++ + + ++ +N ALQ+ +D ++ T R+ ++ + Sbjct: 59 IDLAKHITEELGYE---LEIKDMNFDGLIGALQADTVDFVASGMSATDERKENVDFSVE- 114 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + G+ FI + I S+ L G I VQ GT + A ++ +++ Sbjct: 115 -YHRSGEMFITLPESEIESMDDLEGTKIGVQLGTIQDTAAQKL--AESIDIEVKALDKLP 171 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAIIQGDTEWYN 239 + +A R DA D + D S SP +A A +G + Sbjct: 172 ALIQELKAGRIDAIYLDKTVAEGYIKEV----NLKGFDDESSVSPGMAMAFPKGSDKVEE 227 Query: 240 IVSWTHYAMVTAEELGITQKNINQ 263 E + +K + + Sbjct: 228 FSKVIEEMKENGELKKLEEKWLKE 251 >gi|13470758|ref|NP_102327.1| amino acid ABC transporter amino acid-binding protein [Mesorhizobium loti MAFF303099] gi|14021501|dbj|BAB48113.1| probable amino acid binding protein of ABC transporter [Mesorhizobium loti MAFF303099] Length = 261 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 47/241 (19%), Positives = 86/241 (35%), Gaps = 23/241 (9%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L+ G F + ++G GFD+D +AL + K ++ + ALQ+ Sbjct: 27 TLRIGTEGAYPPFNNLTSDGKLVGFDIDIAQALCDQM---KVKCTFVAQDWDGIIPALQA 83 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV--SQLSGASICVQA 152 + D + + T R+ + + Y + K + V + L+G +I V Sbjct: 84 GKFDAIVASMSITPERKEKVDFTHK--YYNTPSALAVPKDSTLKGVTKADLAGKTIGVAT 141 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 TT +Y + E A R DA DI L L + + Sbjct: 142 TTTH----FNYASKTYTDSTVKGYPSSPEEQADLANGRLDAIEDDIVVLQQW-LDSPDGA 196 Query: 213 EHVILPDIISKSPL-------APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 IL S P+ A+ +G+T ++V+ + A+ G ++ ++ Sbjct: 197 CCKILGQP-SPQPVEIFGPGAGIAVRKGET---DLVNKLNEAIDAIRANGKYKEINDKYF 252 Query: 266 K 266 K Sbjct: 253 K 253 >gi|330944616|gb|EGH46566.1| extracellular solute-binding protein [Pseudomonas syringae pv. pisi str. 1704B] Length = 147 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 30/147 (20%), Positives = 53/147 (36%), Gaps = 15/147 (10%) Query: 2 YKDFFVSILCLIILFF-------------TSFSTNASILGDIKKRGFLKCGINTGLVGFA 48 +K V L L + S ++S L IK R L G+ + F Sbjct: 3 FKTALVLPLIAFTLMAGCDKPAEQKPVAKAAPSPSSSYLETIKARDKLIVGVFSDKPPFG 62 Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 V G + GFD D + + + D KI+++ + R LQS ++D++ N T Sbjct: 63 FVNEQGQYVGFDTDLGKRFAKDLLGDEKKIEFVVVEPASRIPFLQSDKVDLILANMTVTP 122 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKK 135 R ++ ++ + Sbjct: 123 ERREAVDF--TNPNLRVAVQALVPQAS 147 >gi|300118988|ref|ZP_07056699.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus cereus SJ1] gi|298723604|gb|EFI64335.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus cereus SJ1] Length = 264 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 49/288 (17%), Positives = 99/288 (34%), Gaps = 28/288 (9%) Query: 1 MYKDFFVSI----LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M + + LC + +A+ + KK + ++ F + +G Sbjct: 1 MKRKLLTIVASITLCTSFILGACSKESATTTSNGKK--EFRYAMSGLYKPFNYKENDGKL 58 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFDV+ AL+ + P+ I + L++K+ D++ + T R ++ Sbjct: 59 VGFDVEIGEALAKKMNMKPTPI---TNPWETLIQGLKAKKYDVILGSMAITEERLKAVNF 115 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + P Q F+ K ISS L G I V +T D H + + Sbjct: 116 SN-PYYRSGAQIFVAKKNTSISSPEDLKGKKIGVVKAST----FKDLVAKHTDQIT--EY 168 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + R DA D + L++ + S ++ + AI + + E Sbjct: 169 DSDITALMDLEPGRIDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDNKE 226 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSN 284 V+ ++ + G +K + + LG ++++ Sbjct: 227 MVEKVNKALDEII---KDGTYEKISKKWFG-------RNILGEEENTK 264 >gi|294637081|ref|ZP_06715395.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Edwardsiella tarda ATCC 23685] gi|291089709|gb|EFE22270.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Edwardsiella tarda ATCC 23685] Length = 248 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 48/268 (17%), Positives = 85/268 (31%), Gaps = 27/268 (10%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K + + + L F + A L +T V F K + + GFD+ Sbjct: 1 MKSLLKASVAALALTFALGAQAAEK--------PLIVATDTAFVPFEFKKGD-KYVGFDI 51 Query: 62 DFCRALSSAIFDDPSKIQYL--PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D A++ + + Y P++ ALQ+ +D+ T R+ ++ + Sbjct: 52 DLWEAIAKQL-----HLNYTLKPMDFSGIIPALQTHNVDLALAGISITEERKKAIDFSDG 106 Query: 120 PITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y G ++ I + L G + V++GT DY KAH F Sbjct: 107 --YYNSGLMVMVKSDNAEIKGIKDLDGKVVAVKSGTAGV----DYAKAHVKSKDLRQFPN 160 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 ++ R DA D + T + + D + A +G Sbjct: 161 IDNAYLELATGRADAVLHDTPNILYFIQTAGN-GQFKAVGDSLEAQAYGIAFPKGSDALR 219 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSK 266 V+ T +E G + Sbjct: 220 EQVNGALK---TLKENGTYAAIYKKWFG 244 >gi|229120016|ref|ZP_04249271.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus 95/8201] gi|228663482|gb|EEL19067.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus 95/8201] Length = 264 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 48/270 (17%), Positives = 92/270 (34%), Gaps = 21/270 (7%) Query: 1 MYKDFFVSI----LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M + + LC + +A+ + KK + ++ F + +G Sbjct: 1 MKRKLLTIVASITLCTSFILGACSKESATTSSNGKK--EFRYAMSGLYKPFNYKENDGKL 58 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFDV+ AL+ + P+ I + L++K+ D++ + T R ++ Sbjct: 59 VGFDVEIGEALAKKMNMKPTPI---TNPWETLIQGLKAKKYDVILGSMAITEERLKAVNF 115 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + P Q F+ K ISS L G I V +T D H + + Sbjct: 116 SN-PYYRSGAQIFVAKKNTSISSPEDLKGKKIGVVKAST----FKDLVAKHTDQIT--EY 168 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + R DA D + L++ + S ++ + AI + D E Sbjct: 169 DSDITALMDLEPGRIDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDDKE 226 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSK 266 V+ ++ + G +K + Sbjct: 227 MVEKVNKALDEII---KDGTYEKISKKWFG 253 >gi|168491297|ref|ZP_02715440.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae CDC0288-04] gi|221232134|ref|YP_002511287.1| putative extracellular amino acid-binding protein [Streptococcus pneumoniae ATCC 700669] gi|183574399|gb|EDT94927.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae CDC0288-04] gi|220674595|emb|CAR69158.1| putative extracellular amino acid-binding protein [Streptococcus pneumoniae ATCC 700669] Length = 271 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 42/276 (15%), Positives = 91/276 (32%), Gaps = 23/276 (8%) Query: 1 MYKDFFVSILCLIILFF------TSFSTNASILGDIKKRGFLKCGINTGLVGF---AEVK 51 M ++ +LC + F + + + S + IK++G L + F + V Sbjct: 1 MKSKKWIFVLCNFLASFFLVACQSGSNGSQSAVDAIKQKGKLVVATSPDYAPFEFQSLVD 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G D+D +A++ + K++ ++ +LQ+ + D+ T R Sbjct: 61 GKNQVVGADIDMAQAIADELG---VKLEISSMSFDNVLTSLQTGKADLAVAGISATDER- 116 Query: 112 ISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 F Y + F++ K ++ L A+I Q GT E + + Sbjct: 117 -KEVFDFSIPYYENKISFLVRKADVEKYKDLTSLESANIAAQKGTVPESMVKEQLPKAQ- 174 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + E + + DA D + N + + + A A Sbjct: 175 ---LTSLTNMGEAVNELQVGKVDAVHMDEPVALSYAAKNAGLAVATVSLKMKDGDANAVA 231 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 + + + +V ++ G Q + + + Sbjct: 232 LRKNSDDLKEVVDKVIQ---KLKDEGTYQSYLEKAA 264 >gi|55823397|ref|YP_141838.1| amino acid (glutamine) ABC transporter substrate-binding protein [Streptococcus thermophilus CNRZ1066] gi|55739382|gb|AAV63023.1| amino acid (glutamine) ABC transporter substrate-binding protein [Streptococcus thermophilus CNRZ1066] Length = 264 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 43/268 (16%), Positives = 87/268 (32%), Gaps = 14/268 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWK 57 M K F ++ L+ + + + IK+ L ++ F V Sbjct: 1 MKKLFLGAMAFLVAVTLVACGSKKDADESIKENKKLVVAVSPDYPPFEFKTLVDGKDQVV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G D+ +A+++ + K++ ++ +LQS + D+ T R+ + Sbjct: 61 GSDIKLAQAIANELG---VKLEVTTMSFDNVLSSLQSGKADLAISGISVTDERKKT--FD 115 Query: 118 FRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F Y I+ K SS+ L G + VQ GT E K I Sbjct: 116 FSDPYYETQNAIIVRKGQESTYSSLDALKGKKVAVQKGTIEEG----LAKKQLKDSTVIS 171 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E ++ + DA + N + + + A A+ +G+ Sbjct: 172 LTAMGEAINEVKSGQVDAVDLEKPVAEGYVAQNSDLTLASVALKVDDGDAKAVAMTKGND 231 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQ 263 + V+ + K+ ++ Sbjct: 232 KLKEAVNKVIKKLKADGTYDEYIKDASK 259 >gi|78358781|ref|YP_390230.1| extracellular solute-binding protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78221186|gb|ABB40535.1| amino acid ABC transporter substrate-binding protein, PAAT family [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 261 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 40/241 (16%), Positives = 81/241 (33%), Gaps = 17/241 (7%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 L IK+ G + ++ G F + + GFDVD + ++S + + ++P+ Sbjct: 29 DALSRIKEAGEISFAMSGGYPPFNFYNDSNELTGFDVDVAKEVASRLG-----VAFVPVT 83 Query: 85 --AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 L+S D + + T R + + Y+ G ++ ++ + Sbjct: 84 TEWSGIIEGLRSGAYDGILGSMAVTPERLKVVNFSNA--YYYSGAQVMVKDSAPYTAPQE 141 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G V GTT +++ + DA D + Sbjct: 142 LKGKVFGVVTGTTFAEDAEKL-----GAGEVRLYKDDTQTLLELDNGVVDAVITDR--VV 194 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQKNI 261 + N +L + +A A +G+ V+ AM L +++K + Sbjct: 195 GVNAVNSGRFNIRMLGAPLRSENIAVAFRKGEDTLLKEVNAVLAAMHEDGTLASLSRKWL 254 Query: 262 N 262 N Sbjct: 255 N 255 >gi|146320879|ref|YP_001200590.1| putative amino acid transporter, amino acid-binding protein [Streptococcus suis 98HAH33] gi|145691685|gb|ABP92190.1| putative amino acid transporter, amino acid-binding protein [Streptococcus suis 98HAH33] gi|292558356|gb|ADE31357.1| putative amino acid transporter [Streptococcus suis GZ1] Length = 315 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 51/266 (19%), Positives = 100/266 (37%), Gaps = 24/266 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI----LGDIKKRGFLKCGINTGLVGFAE---VKAN 53 M K + ++ L + ++ S NA+ L D++++G L +N F V Sbjct: 47 MKKYIMMGLVLLATMTLSACSGNATQEDTSLKDVQEKGKLIVALNPEFPPFEFRTLVDGK 106 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G D++ +A+ + + +++ ++ +QS Q DI T R + Sbjct: 107 DTIVGADIELAKAIGQELGVE---VEFSAMSFDNVLNNVQSGQSDIAISGISATEER--A 161 Query: 114 LGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F Y I++K+ +S+ L+ A+I Q G+ E + + + Sbjct: 162 KVYDFSIPYYTSTNKVIINKEDLAQYTSLDSLAEANIGAQKGSIQEQIIKEQLPSS---- 217 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP---LAP 228 I E+ ++ + +A + A ND + VIL I S A Sbjct: 218 TVIALASNGELINQLKSQKVEAVIFEEPIAKAYVAKND---DLVILDTEIKSSYSDAYAI 274 Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEEL 254 A+ +G T V +V + ++ Sbjct: 275 ALPKGSTALKEKVDSVITKLVESGQM 300 >gi|160903094|ref|YP_001568675.1| extracellular solute-binding protein [Petrotoga mobilis SJ95] gi|160360738|gb|ABX32352.1| extracellular solute-binding protein family 3 [Petrotoga mobilis SJ95] Length = 243 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 53/268 (19%), Positives = 90/268 (33%), Gaps = 27/268 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ LI F++FS G F V G++ GFD Sbjct: 1 MLKKAFLVSAILISFVFSAFSV------------TYVVGTEASFPPFEYV-EGGEFVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D R + D ++ ++ +L + IDI+ T RE + Sbjct: 48 MDLIREIGKMYGFD---VEIRDISFDSLIPSLMTGNIDIIVAGMTITEEREKVVDFTI-- 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM--KYHPIVFER 178 Y Q ++ K + + L I VQ GTT +L + + K + I ++ Sbjct: 103 PYYSADQSIMVRKGEDTNLTILLRKPKIGVQTGTTGDLWVTENLIDAGFLPKTNLIRYDT 162 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 D D A + T P E I+ I + A+ G+ + Sbjct: 163 FNFAVRDLVNKNIDVIVLDNPV--AERFTKTDPVE--IVGIIKTNENYGMAVAPGNEDLL 218 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSK 266 N+++ + +E G I + K Sbjct: 219 NMLN---EGITKLQESGKMDDLIEKYFK 243 >gi|323942777|gb|EGB38942.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli E482] Length = 243 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 45/268 (16%), Positives = 92/268 (34%), Gaps = 30/268 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L ++ + GI+ F + AN + GFD Sbjct: 1 MKKLVLAALLASFTFGASAAE-------------KINFGISATYPPFESIGANNEIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + + + + +L+ ++ D + D T R + Sbjct: 48 IDLAKALCKQMQAECT---FTNHAFDSLIPSLKFRKYDAVISGMDITPERSKQVSFT--- 101 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y++ ++ KK + + L G I ++ GTT + + D + + + ++ + Sbjct: 102 TPYYENSAVVIAKKDTYKTFADLKGKRIGMENGTTHQKYIQD----QHPEVKTVSYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR---PSEHVILPDIISKSPLAPAIIQGDTEW 237 + R D GD + + TN + +E V P L A+ + Sbjct: 158 NAFIDLKNGRIDGVFGDTAVVNEWLKTNPQLGVATEKVTDPQYFGT-GLGIAVRPDNKAL 216 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVS 265 ++ A+ G QK +Q Sbjct: 217 LEKLNNALAAIKA---DGTYQKISDQWF 241 >gi|227890364|ref|ZP_04008169.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus johnsonii ATCC 33200] gi|227849178|gb|EEJ59264.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus johnsonii ATCC 33200] Length = 500 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 46/274 (16%), Positives = 98/274 (35%), Gaps = 48/274 (17%) Query: 1 MYKDFFVSILCLIILFFTSFS--------------TNASILGDIKKRGFLKCGINTGLVG 46 M K S +++FF+ + SIL IKK G L G + Sbjct: 4 MKKTKLFSFFFALLMFFSLGATFIKPAQAANQKQVAEGSILKKIKKSGELVVGTSADYPP 63 Query: 47 FAEV---KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103 + G D++ R ++ + K+ ++ +AL++ ++D++ Sbjct: 64 LEFTTSENGKTKYVGVDIELARDIAKDLG---VKLVIKNMSFDSLLVALETGKVDMVISA 120 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLA 161 T R+ S+ + + G+ F+++K K +S+ L G ++ Q G+ Sbjct: 121 MTPTPERKQSVAFS-KIYYKPSGEYFLVNKKDKDKYTSIQSLKGQTVGAQTGS----NQY 175 Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCD----------AYTGDISALYALKLTNDRP 211 + K+ ++ + A ++ + AY + S L A++ Sbjct: 176 NLVKSQMKDSKLKGLGKINNLVLALQSGKVSAVVVEELIAKAYAENNSGLAAVRSNLKE- 234 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 +++ A AI +G + V+ T Sbjct: 235 ----------TQAGNAVAIAKGQDDLVAQVNKTI 258 >gi|317498349|ref|ZP_07956646.1| bacterial extracellular solute-binding protein, family 3 [Lachnospiraceae bacterium 5_1_63FAA] gi|316894371|gb|EFV16556.1| bacterial extracellular solute-binding protein, family 3 [Lachnospiraceae bacterium 5_1_63FAA] Length = 268 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 45/272 (16%), Positives = 94/272 (34%), Gaps = 20/272 (7%) Query: 2 YKDFFVSILCLIILFFT--------SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 K F V +L + + + L D++ + L G+++ Sbjct: 1 MKKFLVGLLTVALAASMLVGCGKKEEKKKADNSLKDVQSKKELVLGLDSSFPPMGFTDKK 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 + GFD+D + ++ + K++ P+N + L ++++D L ++ R Sbjct: 61 DNIVGFDIDLAKEVTKRMG---IKLKLQPINWNSKEQELNTEKVDCLWNGVTYSKARAKE 117 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYH 172 + + + Q I+ I S+ + + +Q+G+T + N K Sbjct: 118 MLCSES--YMDNHQVLIVPANSKIKSLKDITKDTEVGIQSGSTAADAADSVKELKNSKIK 175 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 +I DA D + A T ++ +L D ++K + Sbjct: 176 L--LADNVQILNDLGHG-LDAAVMD--EVVAKYYTKKDAGKYKVLEDSVAKEKYVIGFRK 230 Query: 233 GDTEWYNIVSWTHYAMVTAEEL-GITQKNINQ 263 D N V AM L I++K ++ Sbjct: 231 DDKALCNEVVKQLKAMAKDGTLKKISEKWFDE 262 >gi|87119147|ref|ZP_01075045.1| polar amino acid uptake family ABC transporter, periplasmic substrate-binding protein [Marinomonas sp. MED121] gi|86165538|gb|EAQ66805.1| polar amino acid uptake family ABC transporter, periplasmic substrate-binding protein [Marinomonas sp. MED121] Length = 304 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 48/261 (18%), Positives = 98/261 (37%), Gaps = 24/261 (9%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-------KANGD--- 55 +S++ + +F A L +IK+RG + G+ T +A + G Sbjct: 27 LISLVFICAIFVLCSQLEAQALDNIKQRGEIIIGVKTDYPPYAHLLTIDNLKTDKGRATQ 86 Query: 56 ---WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G ++D + ++ + K++ + + + R + +K++DIL R Sbjct: 87 AQTHVGLEIDLAQNIADRLG---VKLRLVSVKSSNRMQFIVAKEVDILIATLSDRKERRK 143 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + + P Y G + K ++ QL +C G + F A Sbjct: 144 VVNM-VEPAYYASGTNLLAWKSAKLNYWEQLHKKKVCGLKGAFYNHAIKMDFGA-----K 197 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP-DIISKSPLAPAII 231 I FE ++ A R +C A+ D S + + L + R +H +P + I +P + AI Sbjct: 198 LISFETTDQALLALRQGQCLAFVYDDSFI-SHTLFDQRWQKHFEMPLNSIKNTPWSIAIH 256 Query: 232 QGDTEWYNIVSWTHYAMVTAE 252 + + ++ + Sbjct: 257 HDEEAFKEVLKEMVIDWHRSG 277 >gi|322516343|ref|ZP_08069269.1| polar amino acid uptake family ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus vestibularis ATCC 49124] gi|322125181|gb|EFX96570.1| polar amino acid uptake family ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus vestibularis ATCC 49124] Length = 264 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 40/268 (14%), Positives = 83/268 (30%), Gaps = 14/268 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWK 57 M K F ++ L + + + IK+ L ++ F V Sbjct: 1 MKKLFLGAMALLAAVTLVACGSKKDAYESIKENKKLVVAVSPDYAPFEFKTLVDGKDQVV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G D+ +A++ + K++ ++ +LQS + D+ T R+ + Sbjct: 61 GSDIKLAQAIADELG---VKLEVTTMSFDNVLSSLQSGKADLAISGISVTAERKKT--FD 115 Query: 118 FRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F Y I+ K S+ G + VQ GT E K + Sbjct: 116 FSDPYYETQNAIIVRKDQESTYPSLDAFKGKKVAVQKGTIEEG----LAKKQLKDSTVVS 171 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E ++ + DA + N + + + A A+ +G+ Sbjct: 172 LTAMGEAINEVKSGQVDAVDLEKPVAEGYVAQNPDLALASVALKVDDGDAKAVAMAKGND 231 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQ 263 + V+ + K+ ++ Sbjct: 232 KLKEAVNKVIKKLKANGTYDEYIKDASK 259 >gi|332074975|gb|EGI85447.1| bacterial extracellular solute-binding s, 3 family protein [Streptococcus pneumoniae GA41301] Length = 271 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 44/276 (15%), Positives = 92/276 (33%), Gaps = 23/276 (8%) Query: 1 MYKDFFVSILC--LIILFFTSFST----NASILGDIKKRGFLKCGINTGLVGF---AEVK 51 M ++ +LC L I F + + + S + IK++G L + F + V Sbjct: 1 MKSKKWIFVLCNFLAIFFLVACQSGSNGSQSAVDAIKQKGKLVVATSPDYAPFEFQSLVD 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G D+D +A++ + K++ ++ +LQ+ + D+ T R Sbjct: 61 GKNQVVGADIDMAQAIADELG---VKLEISSMSFDNVLTSLQTGKADLAVAGISATDER- 116 Query: 112 ISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 F Y + F++ K ++ L A+I Q GT E + + Sbjct: 117 -KEVFDFSIPYYENKISFLVRKADVEKYKDLTSLESANIAAQKGTVPESMVKEQLPKAQ- 174 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + E + + DA D + N + + + A A Sbjct: 175 ---LTSLTNMGEAVNELQVGKVDAVHMDEPVALSYAAKNAGLAVATVSLKMKDGDANAVA 231 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 + + + +V ++ G Q + + + Sbjct: 232 LRKNSDDLKEVVDKVIQ---KLKDEGTYQSYLEKAA 264 >gi|269797856|ref|YP_003311756.1| extracellular solute-binding protein family 3 [Veillonella parvula DSM 2008] gi|269094485|gb|ACZ24476.1| extracellular solute-binding protein family 3 [Veillonella parvula DSM 2008] Length = 268 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 47/266 (17%), Positives = 81/266 (30%), Gaps = 24/266 (9%) Query: 3 KDFFVS---ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKG 58 K + ++ L S+N L G N V F + G Sbjct: 7 KKIILGGCMLVMAASLVGGCGSSNQPT------SNKLIVGTNATFVPFEFKDEKTQDYTG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD++ RA+ I D ++ + AL + ID+ + T R + Sbjct: 61 FDIELIRAIGKRINKD---VELKNVAFDALIPALNTHDIDVAASGMTITKARSEKVLF-- 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y + + ++S+ L G I Q GTT F+ Sbjct: 116 SSPYYENALAVVYKDGTAVNSLDDLKGKKIAAQLGTTGADLAHKI-----EGTTVKEFDH 170 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV-ILPDIISKSPLAPAIIQGDTEW 237 E + DA D+ A + P +H+ + +K L AI + + Sbjct: 171 SNEALLELQNGGVDATVIDLPV--AQYYSTKHPDQHIKFMAYPNTKEYLGLAINKDNKAL 228 Query: 238 YNIVSWTHYAMVTAEELG-ITQKNIN 262 ++ M E + +K N Sbjct: 229 QEEINKAIADMKADGEFNTLYKKWFN 254 >gi|307627731|gb|ADN72035.1| arginine-binding periplasmic protein 2 precursor [Escherichia coli UM146] Length = 243 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 44/268 (16%), Positives = 92/268 (34%), Gaps = 30/268 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L ++ + G++ F + AN + GFD Sbjct: 1 MKKLVLAALLASFTFGASAAE-------------KINFGVSATYPPFESIGANNEIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + + + + +L+ ++ D + D T R + Sbjct: 48 IDLAKALCKQMQAECT---FTNHAFDSLIPSLKFRKYDAVISGMDITPERSKQVSFT--- 101 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y++ ++ KK + + L G I ++ GTT + + D + + + ++ + Sbjct: 102 TPYYENSAVVIAKKDTYKTFADLKGKRIGMENGTTHQKYIQD----QHPEVKTVSYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR---PSEHVILPDIISKSPLAPAIIQGDTEW 237 + R D GD + + TN + +E V P L A+ + Sbjct: 158 NAFIDLKNGRIDGVFGDTAVVNEWLKTNPQLGVATEKVTDPQYFGT-GLGIAVRPDNKAL 216 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVS 265 ++ A+ G QK +Q Sbjct: 217 LEKLNNALAAIKA---DGTYQKVNDQWF 241 >gi|220929988|ref|YP_002506897.1| extracellular solute-binding protein family 3 [Clostridium cellulolyticum H10] gi|220000316|gb|ACL76917.1| extracellular solute-binding protein family 3 [Clostridium cellulolyticum H10] Length = 268 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 43/271 (15%), Positives = 95/271 (35%), Gaps = 18/271 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWK 57 M K F + I + + I+K G L G + + V Sbjct: 5 MLKKLFCLFIVAAIGISIAGCGGGETMKRIEKTGKLVVGTSADYAPYEYHMLVDGKDTIV 64 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G D+ ++ + ++Q + + +L + ++DI+ E + Sbjct: 65 GIDISIVEEIAKDMG---VQLQIVDTDFNGLLSSLNTNKVDIVIAGM--NPDEERKKSVD 119 Query: 118 FRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F I Y QG ++ K +V+ L + Q GTT E + + + + + Sbjct: 120 FSKIYYEAKQGVMVRAEDKDKYKTVADLKDKKVGAQLGTTQEKIVKEQIE----GVNLVS 175 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 ++ ++ + + DA + ND + I P A A+ +G++ Sbjct: 176 LGKIPDLVMELKNKKIDALVVEFPVASGYVKNNDDLALTDI-PVKDDTGGSAIAVKKGNS 234 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 N+V + ++ + G+ K + + ++ Sbjct: 235 ---NLVEQINKSLDRLMKDGLIDKFVQEANE 262 >gi|23501838|ref|NP_697965.1| amino acid ABC transporter periplasmic amino acid-binding protein [Brucella suis 1330] gi|161618911|ref|YP_001592798.1| extracellular solute-binding protein [Brucella canis ATCC 23365] gi|163843223|ref|YP_001627627.1| extracellular solute-binding protein [Brucella suis ATCC 23445] gi|254701713|ref|ZP_05163541.1| extracellular solute-binding protein [Brucella suis bv. 5 str. 513] gi|254704255|ref|ZP_05166083.1| extracellular solute-binding protein [Brucella suis bv. 3 str. 686] gi|256369380|ref|YP_003106888.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella microti CCM 4915] gi|23347774|gb|AAN29880.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella suis 1330] gi|161335722|gb|ABX62027.1| extracellular solute-binding protein family 3 [Brucella canis ATCC 23365] gi|163673946|gb|ABY38057.1| extracellular solute-binding protein family 3 [Brucella suis ATCC 23445] gi|255999540|gb|ACU47939.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella microti CCM 4915] Length = 268 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 51/260 (19%), Positives = 87/260 (33%), Gaps = 15/260 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M +++ + + + A+ + + ++ L G F +K +G GFD Sbjct: 1 MRVLKRIAMATSVAALAITVGSMAAGVANAEEPLKLTIGTEGAYPPFNFIKPDGTLSGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD RAL + +K +++ + ALQS + D + T R+ + + Sbjct: 61 VDIARALCDQM---KAKCEFVTQDWDGAIPALQSGKFDAFIASMSITDERKKQVDFTNK- 116 Query: 121 ITYFDGQGFIMHKKKGISSV--SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y G K I V L+G +I VQ G+TT Y + + Sbjct: 117 -YYNTPPGIAAPKDTDIKGVTKEDLAGKTIGVQ-GSTTHAN---YSEKTYTDSTIKSYPT 171 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP----AIIQGD 234 EE R DA D L + D ++ P AI +G Sbjct: 172 AEEYRLDLANGRLDAVNDDSVTLAEWLKSPDGACCKMVGTFPPVTEIHGPGAGIAIKKGR 231 Query: 235 TEWYNIVSWTHYAMVTAEEL 254 E + A+ + Sbjct: 232 PELVAKFNAAIKAIRANGKY 251 >gi|319785561|ref|YP_004145037.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317171449|gb|ADV14987.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 257 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 44/260 (16%), Positives = 87/260 (33%), Gaps = 15/260 (5%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 + +S +L + S + IK G F + A+G +GFD+D Sbjct: 5 KWVISATGAAMLATLAGSLSVQAAEKIK------IGTEGAYPPFNTITADGKVEGFDIDI 58 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 AL + + + + + + ALQ+K+ D + + T R+ + + Y Sbjct: 59 ANALCAQM---KVECEIVTQDWDGIIPALQAKKFDAIIASMSITEERKKQVAFTNK--YY 113 Query: 124 FDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + K ++S + L+G ++ QA TT + + + + EE Sbjct: 114 TTPLALVAPKDTDLTSTEPAALAGKTVGAQASTTQADYAQNEYGKAGAEAKL--YPTQEE 171 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 R DA D L ++ +++ A+ DT + + Sbjct: 172 AITDLTNGRLDAVISDKFVLMDWLKKASDGCCKLVGDVKGTETQAGIAVRLDDTALRDKL 231 Query: 242 SWTHYAMVTAEELGITQKNI 261 + A+V Q Sbjct: 232 NAAIDAIVADGTYKKIQAKY 251 >gi|322834312|ref|YP_004214339.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602] gi|321169513|gb|ADW75212.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602] Length = 272 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 54/271 (19%), Positives = 87/271 (32%), Gaps = 23/271 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M F V L L F++ S + L + + G L+ I F + N GFD Sbjct: 1 MRTPFVVVTLLAATL-FSAASFAGATLDRVTQTGVLRNAIVNDYPPFGFIDDNNQLAGFD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A++ + K++ + + + D + R L P Sbjct: 60 VDVAKAVAQRMG---VKLEIIAPGWETIVGGKWQGRWDTCICSMTPNTERAKVLDF---P 113 Query: 121 ITYFDGQGFIM--HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE- 177 Y++ ++ K I S + LS I V G+T E L K F+ Sbjct: 114 TPYYNSPAVLVVNKKDDRIKSAADLSNKKIGVGIGSTYETYLQKTLVIPGSKPITFPFDN 173 Query: 178 ------RVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 E R D D L R I+ ++ + P Sbjct: 174 VHVIPSDEEVAFQNLALGPGVRLDGVVSD---LATANARIKRAPVFKIVTELYA-EPNWV 229 Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 A +GD EW V+ T ++ L + Sbjct: 230 ATDKGDAEWDKKVADTIKSLRDDGTLAKISQ 260 >gi|225570416|ref|ZP_03779441.1| hypothetical protein CLOHYLEM_06516 [Clostridium hylemonae DSM 15053] gi|225160787|gb|EEG73406.1| hypothetical protein CLOHYLEM_06516 [Clostridium hylemonae DSM 15053] Length = 289 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 39/241 (16%), Positives = 77/241 (31%), Gaps = 18/241 (7%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 G G + + NG++ GFD+D + + + K++ P++ + + Sbjct: 44 DDGTFVVGFDAAFPPYGYKDDNGEYVGFDLDLAQEVCDR---NGWKLKKQPIDWDSKDME 100 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151 L S ID + + + Q ++ + I L+G + VQ Sbjct: 101 LSSGTIDCIWNGFTMN---GREDKYTWSDPYVDNSQVIVVPEDSDIKEFKDLAGKMVEVQ 157 Query: 152 AGTTTELTLADYFKAHNMKYH-------PIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 A ++ TL K + + C+A D+ A Sbjct: 158 ADSSALHTLESDDKEEGGQAELAATFGALNQVADYNTAFMDLESGACEAIAMDVGV--AN 215 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 + R +L + +S +G+ E + V T M E G K + + Sbjct: 216 YQIDSRGGGFRLLDEKLSTEQYGIGFKKGNEELRDTVQKTLNEMA---EDGTLDKIVEKW 272 Query: 265 S 265 + Sbjct: 273 A 273 >gi|295115214|emb|CBL36061.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [butyrate-producing bacterium SM4/1] Length = 308 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 46/312 (14%), Positives = 97/312 (31%), Gaps = 52/312 (16%) Query: 1 MYKDFFVSILCLIILF-FTSFSTNASILG------------------------------- 28 M K F + ++F T+ STNA Sbjct: 1 MKKKVFSVMTAAALVFSLTACSTNAKTEEPETAAQSSASQTEAAGAETAESSGGASAEAG 60 Query: 29 ------DIKKRG-FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 + K G G + V +G++ GFD++ ++ + + ++ Sbjct: 61 EKAASGETKAAGDTFTVGFDQDFPPMGFVGDDGEYTGFDLELAAEVADRLG-----LTFV 115 Query: 82 P--LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 P + + + L+S ID + T + + Q ++ + GI S Sbjct: 116 PQPIAWDAKNMELESGNIDCIWNGFTMT---GREDEYTWSEPYMENSQVVVVLEDSGIES 172 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L+G + VQA ++ E L + + DA D Sbjct: 173 TADLAGKIVEVQADSSAEAALKEMPELTESFAALQTTPDYNTAFMDLEMGSVDAIAMD-V 231 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 + +L IL D ++ A +G+ + V M + + + + Sbjct: 232 IVAGYQLQQRD-GGFKILDDTLASEEYAIGFKKGNEALRDQVQTVLDEMASDGTMKESPR 290 Query: 260 N-INQVSKDTTN 270 + + ++ + + N Sbjct: 291 SGLEKILRQSAN 302 >gi|291459897|ref|ZP_06599287.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Oribacterium sp. oral taxon 078 str. F0262] gi|291417238|gb|EFE90957.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Oribacterium sp. oral taxon 078 str. F0262] Length = 271 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 47/273 (17%), Positives = 93/273 (34%), Gaps = 32/273 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI--------------LGDIKKRG-----FLKCGIN 41 M K ++ + L + +++A+ G+ K G L N Sbjct: 1 MKKILAAAMAVVTALSLGACASSAAKSGGTESAKDTSSESAGEAKAEGSYAGKTLIMATN 60 Query: 42 TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101 + + D G DV+ +A++ + +K + + A+ S + D + Sbjct: 61 AEFPPYEYHEGK-DIVGIDVEIAKAVAEQMG---AKFEVSDMAFDAIISAVDSGKADFGA 116 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 T R+ ++ Q I+ + I S+ L G I VQ GTT ++ Sbjct: 117 AGMTVTEDRKKNVDF--SDTYATSVQSVIVPENSDIKSIDDLKGKKIGVQQGTTGDI--- 171 Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221 Y K F + + A A + DA D + A +L Sbjct: 172 -YATKDYGKDAIQPFPKGVDAVLALGAGKVDAVIIDGNTAKAFVADQKG---LKLLDSAY 227 Query: 222 SKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 ++ A + +G+TE + ++ + + +L Sbjct: 228 AEEEYAICVKKGNTELRDGINAALKELKASGKL 260 >gi|319783613|ref|YP_004143089.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169501|gb|ADV13039.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 261 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 48/241 (19%), Positives = 86/241 (35%), Gaps = 23/241 (9%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L+ G F + A+G GFD+D +AL + K ++ + ALQ+ Sbjct: 27 TLRIGTEGAYPPFNNLTADGQLVGFDIDIAKALCDEM---KVKCTFVAQDWDGIIPALQA 83 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV--SQLSGASICVQA 152 + D + + T R+ + + + Y + K + V L+G +I V Sbjct: 84 GKFDAIVASMSITPERKEKVDFSNK--YYNTPSAIAVPKDSTLKGVTKEDLAGKTIGVAT 141 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 TT +Y + E A R DA DI L L + + Sbjct: 142 TTTH----FNYASKTYTDSTVKGYPSSPEEQADLANGRLDAIEDDIVVLQ-QFLDSPDGA 196 Query: 213 EHVILPDIISKSPL-------APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 IL S P+ A+ +G+T ++V+ + A+ G ++ ++ Sbjct: 197 CCKILGQP-SPQPVEIFGPGAGIAVRKGET---DLVNKLNSAIAAIRANGKYKEINDKYF 252 Query: 266 K 266 K Sbjct: 253 K 253 >gi|257470742|ref|ZP_05634832.1| TcmP [Fusobacterium ulcerans ATCC 49185] gi|317064947|ref|ZP_07929432.1| amino acid-binding protein [Fusobacterium ulcerans ATCC 49185] gi|313690623|gb|EFS27458.1| amino acid-binding protein [Fusobacterium ulcerans ATCC 49185] Length = 241 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 49/252 (19%), Positives = 87/252 (34%), Gaps = 22/252 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + +L L+I+ + + K G N F + +G G D Sbjct: 1 MKKLFKLFMLSLLIVLTAACGAS-------KTEKVYVIGTNAEYPPFEYL-EDGKVCGLD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D A++ + + ++ N ALQ+K++D + T R ++ + Sbjct: 53 ADIIAAIAQKL---NIQYKWSNTNFDGLIPALQTKKMDAVIAGMSITPERAKAVNFSI-- 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 FI +K K I+ + L + + GTT E A F Sbjct: 108 PYLSSNVAFIANKSKPINGIEDLENKNYGAELGTTKEAAARKIKGA-----TVTPFSSNT 162 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A ++ + D D S A+K + P ++L + P A A + DTE Sbjct: 163 GALVALKSGKIDGIVLDESV--AVKFVENNPE--LMLVGALEGEPKAIAFNKDDTELMEK 218 Query: 241 VSWTHYAMVTAE 252 + ++ Sbjct: 219 FNKALQELIDDG 230 >gi|53715882|ref|YP_106605.1| glutamine ABC transporter periplasmic protein [Burkholderia mallei ATCC 23344] gi|67639609|ref|ZP_00438453.1| glutamine-binding periplasmic protein (GlnBP) [Burkholderia mallei GB8 horse 4] gi|121596704|ref|YP_990725.1| glutamine ABC transporter periplasmic protein [Burkholderia mallei SAVP1] gi|124381312|ref|YP_001025208.1| glutamine ABC transporter periplasmic protein [Burkholderia mallei NCTC 10229] gi|126447118|ref|YP_001079562.1| glutamine ABC transporter periplasmic protein [Burkholderia mallei NCTC 10247] gi|166998960|ref|ZP_02264810.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia mallei PRL-20] gi|254177250|ref|ZP_04883906.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia mallei ATCC 10399] gi|254203624|ref|ZP_04909985.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia mallei FMH] gi|254205493|ref|ZP_04911846.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia mallei JHU] gi|254356208|ref|ZP_04972485.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia mallei 2002721280] gi|52421852|gb|AAU45422.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia mallei ATCC 23344] gi|121224502|gb|ABM48033.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia mallei SAVP1] gi|126239972|gb|ABO03084.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia mallei NCTC 10247] gi|147745863|gb|EDK52942.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia mallei FMH] gi|147755079|gb|EDK62143.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia mallei JHU] gi|148025191|gb|EDK83360.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia mallei 2002721280] gi|160698290|gb|EDP88260.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia mallei ATCC 10399] gi|238520180|gb|EEP83642.1| glutamine-binding periplasmic protein (GlnBP) [Burkholderia mallei GB8 horse 4] gi|243064782|gb|EES46968.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia mallei PRL-20] gi|261826254|gb|ABM99403.2| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia mallei NCTC 10229] Length = 250 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 45/267 (16%), Positives = 90/267 (33%), Gaps = 25/267 (9%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + F +I+ L ++ ++ +A L G +T + F + + + GFD+ Sbjct: 3 RRSFIKTIVALALVGASAAGAHA---------KELVVGTDTSFMPFEFKQGD-KYVGFDL 52 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D ++ + P++ A Q++ ID+ R ++ Sbjct: 53 DLWAEIAK---GAGWTYKIQPMDFAGLIPAQQTQNIDVALSGMTIKEERRKAIDF--SDP 107 Query: 122 TYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G ++ I S+ L+G I + GT T D+ KAH F ++ Sbjct: 108 YYDSGLAAMVQANNTTIKSIDDLNGKVIAAKTGTATI----DWIKAHLKPKEIRQFPNID 163 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A A R DA D + + N+ + +S +G + Sbjct: 164 QAYLALEAGRVDAAMHDTPNVL-FFVNNEGKGRVKVAGAPVSGDKYGIGFPKGSP----L 218 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKD 267 V+ + + + G K + Sbjct: 219 VAKVNAELARMKADGRYAKIYKKWFGS 245 >gi|226360987|ref|YP_002778765.1| cystine ABC transporter cystine-binding protein [Rhodococcus opacus B4] gi|226239472|dbj|BAH49820.1| cystine ABC transporter cystine-binding protein [Rhodococcus opacus B4] Length = 262 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 51/287 (17%), Positives = 103/287 (35%), Gaps = 34/287 (11%) Query: 1 MYKDF---FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M + +++L + L S + ++ +++ G LK G F+ +G Sbjct: 1 MRRTLPAALIAVLTALSLAGCGNSDSGPVIDQVRESGVLKVGTEGTYTPFSYQGPDGQLT 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G+DVD RA+ + +++ F L++K+ D+++ R L+ Sbjct: 61 GYDVDVIRAVGDKLGVS---VEFTQTPWDSIFAGLEAKRYDLVANQVTVNDERTQKYDLS 117 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK-AHNMKYHPIVF 176 P TY +G I+S++ L+G TT + +++ + A + + Sbjct: 118 -TPYTYSEGVIVTRADDNAITSLADLNGK-------TTAQSATSNWAQVARDAGANVESV 169 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E + + R DA D A+ + I + S A A + Sbjct: 170 EGFVQAITLLKDGRVDATVNDNLAVAEYQKQTGDTG-VKIAAETGDTSEQAFAARKDSGL 228 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV-QRFLGIDKS 282 +I K ++++ D T + Q++ G D S Sbjct: 229 MPDI-----------------DKALDELRADGTLAQISQKYFGTDVS 258 >gi|260102963|ref|ZP_05753200.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus helveticus DSM 20075] gi|260083248|gb|EEW67368.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus helveticus DSM 20075] gi|328463862|gb|EGF35396.1| amino acid ABC transporter, amino acid-binding protein [Lactobacillus helveticus MTCC 5463] Length = 267 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 48/259 (18%), Positives = 92/259 (35%), Gaps = 13/259 (5%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 L + S N I+K + G++ V K NG G+D+D RA+ Sbjct: 15 TLTGCAKSNNPDSWQTIEKNKQVVIGLDDSFVPMGFEKKNGQLTGYDIDLARAVFKEYG- 73 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 K+ + ++ L++ ID++ T R+ + + + Q ++ K Sbjct: 74 --IKVSFQTIDWSMNVTELRNGTIDLIWNGYSITPERKKKVAFSR--PYLRNRQVLVVKK 129 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHN--MKYHPIVFERVEEIDAAYRAHRC 191 GI SV+Q+ + +Q G+T E Y N I+++ + + R Sbjct: 130 NSGIDSVAQMKKYELGMQTGSTAEQW---YETKQNVLHAKKTILYDTISNSFLDLNSGRI 186 Query: 192 DAYTGDISALYALKLTNDRPSEHVILP-DIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 D + SE+ ++ D + A + +GD ++ + Sbjct: 187 QGILLDEVYADYYIAHMVKSSEYKVIQNDRVPFDEFAVGMRKGDKTLQKKLNEGLARLQK 246 Query: 251 AEELGITQKNINQVSKDTT 269 +L Q N KD+ Sbjct: 247 NGKLR--QINEKWFGKDSN 263 >gi|119489264|ref|ZP_01622071.1| hypothetical protein L8106_07411 [Lyngbya sp. PCC 8106] gi|119454738|gb|EAW35883.1| hypothetical protein L8106_07411 [Lyngbya sp. PCC 8106] Length = 839 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 81/231 (35%), Gaps = 13/231 (5%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPSK 77 +IL +IK+ G LK + F + +W G+ DF ++ + D K Sbjct: 580 PAGETILEEIKRTGVLKAAMRRDAAPFGYIDNKQNWTGYCSDFLNDFANHLTEKLDTAIK 639 Query: 78 IQYL--PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI--MHK 133 +Q + P N RF +++K + + R +AF + G F+ Sbjct: 640 VQLVRFPSNLDNRFQLVRNKTVHLECGPNTI---RNNIPDVAFSQPFFVTGTQFLIQTKN 696 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 + I + L+ V +T E + + Y + + A ++ D Sbjct: 697 EDQIQPNTSLNDIKTGVVRNSTNEQFIRQQYPQAQTIYFRGENA-ISDAVKAVTNNQIDT 755 Query: 194 YTGDISALYALKLTNDRP-SEHVILPD-IISKSPLAPAIIQGDTEWYNIVS 242 + D P + ++P+ ++ A+ DT W +V+ Sbjct: 756 FANDGILTLGELFRQQVPIENYTLVPEKPLTCDFYGVALPNNDTRWRRMVN 806 >gi|239813180|ref|YP_002942090.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] gi|239799757|gb|ACS16824.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] Length = 246 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 54/269 (20%), Positives = 96/269 (35%), Gaps = 26/269 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF-LKCGINTGLVGFAEVKANGDWKGF 59 M + L L F F+ A + +G L+ + V NG GF Sbjct: 1 MNTRRTLVAAALSSLAFFGFAATA------QAQGEPLRVATDATFPPMEFV-ENGKRTGF 53 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DV+ A+ + KI+++ ++ K L SK+ D+ T R + Sbjct: 54 DVELVEAIGKTLG---RKIEWIDIDFKGLVPGLISKRFDMAVSAIYITDERRKVVDFT-- 108 Query: 120 PITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + Y+ G +M K I + + ++G + VQ GT + + F + + E Sbjct: 109 -VPYYAGGLVVMVKDGNTAIKAPADINGKKVSVQVGTKSVAYTKEKFP----QVQLMEVE 163 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + +E+ R DA A Y T +LP+ I+ AI + E Sbjct: 164 KNQEMFNLVDIGRADAAVTGKPAAYQYVRTR---GGLKVLPEQITTEEYGMAIRKDTPEL 220 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSK 266 V+ A+ + G + + + K Sbjct: 221 TKAVNG---AIEKLKADGTYAQIVAKWFK 246 >gi|110668634|ref|YP_658445.1| ABC-type glutamine/glutamate/polar amino acids transport system, substrate-binding protein [Haloquadratum walsbyi DSM 16790] gi|109626381|emb|CAJ52840.1| ABC-type glutamine/glutamate/polar amino acids transport system, substrate-binding protein [Haloquadratum walsbyi DSM 16790] Length = 300 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 33/229 (14%), Positives = 65/229 (28%), Gaps = 16/229 (6%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 + G + F +G+ GFDVD +A+ ++ P + +L + Sbjct: 64 VVIGSDIPYRPFEYETTSGELTGFDVDIAQAVFEDQLG--VNYEFKPTSFDSIIPSLNNG 121 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 I+ R+ + + Q I+ ISS L G + VQ GTT Sbjct: 122 NFRIIMSAMTINDTRDEKVDF--SDPYFTAYQTIIVRADSSISSRGDLEGTVVGVQKGTT 179 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215 + + ++++ A + + A D + D Sbjct: 180 GANAAEELQSDFDGNIELNRYDQIPAAFQALKNGQVSAVINDNTVNAEFASQEDNIEFIE 239 Query: 216 ILPD------------IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 ++ A + D+E+ V + Sbjct: 240 GEGAAVEAGQDAPPYLTLTVENYGIAFREDDSEFLERVDEALATIKNNG 288 >gi|308186225|ref|YP_003930356.1| Arginine-binding periplasmic protein precursor [Pantoea vagans C9-1] gi|308056735|gb|ADO08907.1| Arginine-binding periplasmic protein precursor [Pantoea vagans C9-1] Length = 243 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 51/266 (19%), Positives = 89/266 (33%), Gaps = 26/266 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L L T+ T ++ F V A+ +GFD Sbjct: 1 MKKMVLAALLAGFSLSATAAQT-------------IRFATEASYPPFEFVDADNKIQGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL I + + +L+ ++ D + D T RE + Sbjct: 48 VDLANALCKEIDATCT---FTNQAFDSLIPSLKFRRFDAVMAGMDITPDREKQVLFTK-- 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+D + +K ++SV L G + VQ GTT + LAD + + ++ + Sbjct: 103 -PYYDNSALFVAQKGKVASVEALKGKRVGVQNGTTHQKYLAD----KHSDITIVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH--VILPDIISKSPLAPAIIQGDTEWY 238 + R DA GD + + N + + + L A+ G+T+ Sbjct: 158 NAVLDLKNGRIDAVFGDTAVVNEWLKQNAALAAVGDKVTDKAYFGTGLGIAVRTGNTDLQ 217 Query: 239 NIVSWTHYAMVTAEELG-ITQKNINQ 263 + + I K Q Sbjct: 218 TKFNGALDKIKADGTYKTIYSKWFQQ 243 >gi|294789055|ref|ZP_06754295.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Simonsiella muelleri ATCC 29453] gi|294483157|gb|EFG30844.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Simonsiella muelleri ATCC 29453] Length = 269 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 41/264 (15%), Positives = 93/264 (35%), Gaps = 17/264 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKR---------GFLKCGINTGLVGFAEVK 51 + + F VS + + ++ + + L+ G N F + Sbjct: 3 LNQWFTVSCAAMALAACGGSQSSGNTAPPVASSANPTATTGEKVLRIGTNAEFAPFESLN 62 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 + +GFD+D ++ K+++ F +L +K +D ++ T R+ Sbjct: 63 EKQEIQGFDIDLLNEMAK---VGHFKVEFKHTPWDGIFASLDNKDVDAVASAVTITDDRK 119 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG-ASICVQAGTTTELTLADYFKAHNMK 170 ++ + Y Q ++ K + +V L + V +G T +L F A + Sbjct: 120 KTMDFSE--PYYKITQVVLIPPSKTVKNVDDLKKLPKVGVVSGQTGDLAAQKIFGATSP- 176 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 + F+ V + DA D + + N ++ + A+ Sbjct: 177 -NIARFDTVTLLTKEVENGGVDAGISDSAVIANYIKNNTNKGFSMVQIPDFQEEHYGFAV 235 Query: 231 IQGDTEWYNIVSWTHYAMVTAEEL 254 +GDTE N+++ + + + + Sbjct: 236 RKGDTETLNLLNDSLKQVRESGKY 259 >gi|218191223|gb|EEC73650.1| hypothetical protein OsI_08176 [Oryza sativa Indica Group] Length = 449 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 88/268 (32%), Gaps = 25/268 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M F VS+ L + F S L +T V F + + + GFD Sbjct: 1 MKSIFKVSLAALSLAFAVSSHAA----------DKLVVATDTAFVPFEFKQGD-KYVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A++ + D P++ ALQ+K +D+ T R+ ++ + Sbjct: 50 IDLWAAVAKELKLD---YTLKPMDFGGIIPALQTKNVDLALAGITITDERKKAIDFSDG- 105 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G +++ + + L+G + V++GT + DY K H F + Sbjct: 106 -YYKSGLLVMVNADNNSVKGIDDLNGKVVAVKSGTGSV----DYAKQHIKTKDLRQFPNI 160 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R DA D + T + + D + A +G Sbjct: 161 DNAYMELGTKRADAVLHDTPNILYFIKTA-GAGKFKTVGDSLEAQQYGIAFPKGSDALRE 219 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKD 267 V+ T E G + + Sbjct: 220 KVNGALK---TLRENGTYNEIYKKWFGT 244 >gi|111017250|ref|YP_700222.1| ABC amino acid transporter, periplasmic substrate binding protein [Rhodococcus jostii RHA1] gi|110816780|gb|ABG92064.1| ABC amino acid transporter, periplasmic substrate binding protein [Rhodococcus jostii RHA1] Length = 329 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 43/235 (18%), Positives = 85/235 (36%), Gaps = 11/235 (4%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSK 77 + LGDI+ RG + ++ F+ G GF VD R ++ + DP+K Sbjct: 79 GTPSFGGTLGDIRARGTVVVAVDQNTNLFSFRDPTTGTLTGFGVDLAREVARDLLGDPTK 138 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 +++ PL + L + D++ R + L F + + ++ GI Sbjct: 139 VEFRPLGTDDGAEMLADRDADMVVRPVALPC--QGLQDLTFSTVYLEASRRLVVRDGSGI 196 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 S + L+ +C + L+ + ++ A + + DA G Sbjct: 197 SGPADLARRRVCTHHDPASMSALSRIAPKA----TILAVPDWDDCLMAIQQRQADAVAG- 251 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 + L L P+ ++ P+ S A + G+ + V+ T + T Sbjct: 252 AAFLAGLVAQ--DPNLEIVGPETDSAQ-YAIGLAPGNDDLVRFVNGTLERLRTDG 303 >gi|120406518|ref|YP_956347.1| polar amino acid ABC transporter inner membrane subunit [Mycobacterium vanbaalenii PYR-1] gi|119959336|gb|ABM16341.1| amino acid ABC transporter substrate-binding protein, PAAT family / amino acid ABC transporter membrane protein, PAAT family [Mycobacterium vanbaalenii PYR-1] Length = 503 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 47/266 (17%), Positives = 96/266 (36%), Gaps = 17/266 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDV 61 + +++L I + T+ ++ S ++ G L+ G F+ A G G+DV Sbjct: 21 RTVLLAVLAAIAVLLTACGSSGSG-NPVESSGVLRVGTEGVYAPFSYHDPATGQLTGYDV 79 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D RA+ + + ++++ F AL++ + D+++ T R+ L+ P Sbjct: 80 DVARAVGEKLGVN---VEFVETPWDSIFAALEANRFDVVANQVTITPERQQKYDLSE-PY 135 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + +G I+S++ L G TT+ A + + E + + Sbjct: 136 SIGEGVIVTRADDDSITSLADLRGKR--AAQSTTS--NWAGVARDAGAQIE--SVEGLTQ 189 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A R D D ++YA L + I KS A + ++ Sbjct: 190 AMALLSQGRVDVVVNDSLSIYAY-LAETNDTAVKIAGATGEKSEQGFAARKNSGLLPDL- 247 Query: 242 SWTHYAMVTAEELGITQKNINQVSKD 267 + A+ + G + + K Sbjct: 248 ---NTALEELKADGTLAEISQKYLKT 270 >gi|21223627|ref|NP_629406.1| secreted protein [Streptomyces coelicolor A3(2)] gi|256785262|ref|ZP_05523693.1| secreted protein [Streptomyces lividans TK24] gi|289769153|ref|ZP_06528531.1| secreted protein [Streptomyces lividans TK24] gi|9968710|emb|CAC05959.1| secreted protein [Streptomyces coelicolor A3(2)] gi|289699352|gb|EFD66781.1| secreted protein [Streptomyces lividans TK24] Length = 320 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 46/262 (17%), Positives = 88/262 (33%), Gaps = 20/262 (7%) Query: 18 TSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 + A L I+ +G +K G + +G G D D AL + Sbjct: 50 AGGAPLADKLPQSIRDKGTIKVGSDIAYAPVEFKDDSGKTVGIDPDLADALGKQLG---V 106 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP---------ITYFDGQ 127 K ++ L+SK+ DI T R+ + + G Sbjct: 107 KFEFENGTFDTLITGLRSKRYDIAMSAMTDTKDRQEGIDGDTGKKVGQGVDFVDYFTAGV 166 Query: 128 GFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKA--HNMKYHPIVFERVEEID 183 K +GI + S L G + VQ GT +E + K F+ ++ Sbjct: 167 SIYTKKGDDQGIKTWSDLCGKKLVVQRGTVSEDLAKAENEKCPAGKKISMQPFDNDQQAQ 226 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 RA DA + D T+ + ++ + + +P A+ + +T+ + + Sbjct: 227 TRLRAGGADAGSSDFPVAAYAVKTSGGGKDFELVGEQVEAAPYGIAVAKDNTQLRDALKA 286 Query: 244 THYAMVTAEELGITQKNINQVS 265 A++ E +K +++ Sbjct: 287 ALDAVIANGE---YKKIMDKWG 305 >gi|324112658|gb|EGC06634.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia fergusonii B253] Length = 243 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 44/268 (16%), Positives = 92/268 (34%), Gaps = 30/268 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L ++ + G++ F + AN + GFD Sbjct: 1 MKKLVLAALLASCAFGASAAE-------------KINFGVSATYPPFESIGANNEIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + + + + +L+ K+ D + D T R + Sbjct: 48 IDLAKALCKQMQAECT---FTNHAFDSLIPSLKFKKYDAVISGMDITPERSKQVSFT--- 101 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y++ ++ KK + + L G I ++ GTT + + D + + + ++ + Sbjct: 102 TPYYENSAVVIAKKDTYKTFADLKGKRIGMENGTTHQKYIQD----QHPEVKTVSYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR---PSEHVILPDIISKSPLAPAIIQGDTEW 237 + R D GD + + TN + +E V P L A+ + Sbjct: 158 NAFIDLKNGRIDGVFGDTAVVNEWLKTNPQLGVATEKVTDPQYFGT-GLGIAVRPDNKAL 216 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVS 265 ++ A+ G +K +Q Sbjct: 217 LEKLNNALAAIKA---DGTYKKINDQWF 241 >gi|167766389|ref|ZP_02438442.1| hypothetical protein CLOSS21_00894 [Clostridium sp. SS2/1] gi|167711798|gb|EDS22377.1| hypothetical protein CLOSS21_00894 [Clostridium sp. SS2/1] gi|291560832|emb|CBL39632.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [butyrate-producing bacterium SSC/2] Length = 268 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 45/272 (16%), Positives = 95/272 (34%), Gaps = 20/272 (7%) Query: 2 YKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 K F V +L + + + + L D++ + L G+++ Sbjct: 1 MKKFLVGLLTVALAASMLVGCGKKEEKTKTDNSLKDVQSKKELVLGLDSSFPPMGFTDKK 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 + GFD+D + ++ + K++ P+N + L ++++D L ++ R Sbjct: 61 DNIVGFDIDLAKEVTKRMG---IKLKLQPINWNSKEQELNTEKVDCLWNGVTYSKARAKE 117 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYH 172 + + + Q I+ I S+ + + +Q+G+T + N K Sbjct: 118 MLCSES--YMDNHQVLIVPANSKIKSLKDITKDTEVGIQSGSTAADAADSVKELKNSKIK 175 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 +I DA D + A T ++ +L D ++K + Sbjct: 176 L--LADNVQILNDLGHG-LDAAVMD--EVVAKYYTKKDAGKYKVLEDSVAKEKYVIGFRK 230 Query: 233 GDTEWYNIVSWTHYAMVTAEEL-GITQKNINQ 263 D N V AM L I++K ++ Sbjct: 231 DDKALCNEVVKQLKAMAKDGTLKKISEKWFDE 262 >gi|310814818|ref|YP_003962782.1| extracellular solute-binding protein [Ketogulonicigenium vulgare Y25] gi|308753553|gb|ADO41482.1| extracellular solute-binding protein [Ketogulonicigenium vulgare Y25] Length = 263 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 38/253 (15%), Positives = 93/253 (36%), Gaps = 13/253 (5%) Query: 1 MYKDFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M + +++L + + A+ L +I++RG ++ + G+ ++ + +N G Sbjct: 1 MKINRRIALLAMTAGMSLGLAMPAAADLAEIRERGVIRIAVAMGIPQYSYIDSNMQPAGS 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DV+ R L+ + ++ + + R +Q+ + D++ T R ++ + Sbjct: 61 DVETARMLAEDLG---VALELVEITNAARVPTIQTDKADLVVSALGITDERRQAIDFSVP 117 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 T IS + L+G I + TT + + A+ + FE Sbjct: 118 YATL--ALVVAAPADIDISDYADLTGKRIALTRATTNDQDIT----ANTTGAEILRFEDD 171 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + + + + D + + + + R + + I ++ L + +G+ E Sbjct: 172 ATLITSVISGQVDIISSQSAVIGGI--NERRRGGPLEIKFIQRETNLGIGLAKGNPELLA 229 Query: 240 IVS-WTHYAMVTA 251 V W Sbjct: 230 WVDEWVVTNFDNG 242 >gi|769791|emb|CAA60102.1| artI [Escherichia coli K-12] Length = 244 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 51/270 (18%), Positives = 97/270 (35%), Gaps = 33/270 (12%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ T ++ F + AN GFD Sbjct: 1 MKKVLIAALIAGFSLSATAAET-------------IRFATEASYPPFESIDANNQIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL I + + +L+ ++++ + D T RE + Sbjct: 48 VDLAQALCKEIDATCT---FSNQAFDSLIPSLKFRRVEAVMGGMDITPEREKQVLFT--- 101 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASI-CVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y+D + ++ +SV QL G + VQ GTT + + D + + + ++ Sbjct: 102 TPYYDNSALFVGQQGKYTSVDQLKGKKVRSVQNGTTHQKFIMD----KHPEITTVPYDSY 157 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDT 235 + R D GD + ++ D P V+ + K L A+ QG+T Sbjct: 158 QNAKLDLENGRIDGVFGDTAVVHEWLK--DNPKLVVVGDKVTDKDYFGTGLGIAVRQGNT 215 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVS 265 E ++ A+ ++ G + N+ Sbjct: 216 ELQQKLN---TALEKVKKDGTYETIYNKWF 242 >gi|290961426|ref|YP_003492608.1| solute-binding protein [Streptomyces scabiei 87.22] gi|260650952|emb|CBG74070.1| putative secreted solute-binding protein [Streptomyces scabiei 87.22] Length = 283 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 48/248 (19%), Positives = 89/248 (35%), Gaps = 14/248 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 + T A + +K G L + F + + +G +GFDV ++ + + Sbjct: 36 ATKTAAGGVELVKA-GQLTTCTHLPYPPF-QSEIDGKVQGFDVSLIDLVAQDLGVKQEIL 93 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 P + L S + D+ + T R+ ++ + Q + KK GIS Sbjct: 94 D-TPFENFKTGAFLNSGECDLAAAGMTITDERKKNVDF--SDPYFEATQAVLADKKAGIS 150 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 S + L G + QA TT E DY K+ + + FE + + R + DA D Sbjct: 151 SFADLKGKKVGTQAQTTGE----DYAKSKGIDS--VSFESSDAVLNGLRTRQVDAVIIDY 204 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 + + + I + + +G+T+ + A+ A+ G + Sbjct: 205 PVVQGWLKDKANAAAFEVAEQINTGEQYGFTVRKGNTKLLAAID---KALAKAKSDGTYK 261 Query: 259 KNINQVSK 266 K Q Sbjct: 262 KLYEQWIG 269 >gi|116627712|ref|YP_820331.1| amino acid ABC transporter periplasmic protein [Streptococcus thermophilus LMD-9] gi|116100989|gb|ABJ66135.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus thermophilus LMD-9] gi|312278254|gb|ADQ62911.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus thermophilus ND03] Length = 283 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 46/275 (16%), Positives = 94/275 (34%), Gaps = 18/275 (6%) Query: 3 KDFFVSILCLIILFFTS-------FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 K ++ L ++ LF S F+T K +K G + V + +G Sbjct: 6 KTVLLACLVILPLFALSACSSRSHFATQKDQWQTYTKEKKIKIGFDATFVPMGYEEKDGS 65 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + GFD+D A+ D +++ ++ + L++ ID++ T R+ S Sbjct: 66 YIGFDIDLANAVFKLYGID---VEWQAIDWDMKETELKNGTIDLIWNGYSVTDERKQSAD 122 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYH 172 + Q + K GI SV+ ++G ++ QAG++ K Sbjct: 123 FTE--PYMVNEQVLVTKKSSGIDSVAGMAGKTLGAQAGSSGYDAFNASPKILKDVVANQK 180