PSIBLAST alignment of GI: 254780170 and protein with PDB id: 1laf
>gi|1065303|pdb|1LAF|E Chain E, Structural Bases For Multiple Ligand Specificity Of The Periplasmic Lysine-, Arginine-, Ornithine-Binding Protein Length = 238
>gi|1065310|pdb|1LAG|E Chain E, Structural Bases For Multiple Ligand Specificity Of The Periplasmic Lysine-, Arginine-, Ornithine-Binding Protein Length = 238
Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats.
Identities = 45/245 (18%), Positives = 85/245 (34%), Gaps = 20/245 (8%)
Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
++ G +T F+ A G++ GFD+D + + K ++ + +L++
Sbjct: 5 TVRIGTDTTYAPFSSKDAKGEFIGFDIDLGNEMCKRM---QVKCTWVASDFDALIPSLKA 61
Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAG 153
K+ID + + T R +AF Y I K I ++ L G + V G
Sbjct: 62 KKIDAIISSLSITDKR--QQEIAFSDKLYAADSRLIAAKGSPIQPTLESLKGKHVGVLQG 119
Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
+T E D ++ + + + + I + A R DA D A L E
Sbjct: 120 STQEAYANDNWRTKGVD--VVAYANQDLIYSDLTAGRLDAALQDEVAASEGFLKQPAGKE 177
Query: 214 HVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268
+ + + + DTE EL ++++K
Sbjct: 178 YAFAGPSVKDKKYFGDGTGVGLRKDDTELKAAFDKALT------ELRQDGT-YDKMAKKY 230
Query: 269 TNPDV 273
+ +V
Sbjct: 231 FDFNV 235