RPSBLAST alignment for GI: 254780170 and conserved domain: smart00062

>gnl|CDD|128376 smart00062, PBPb, Bacterial periplasmic substrate-binding proteins. bacterial proteins, eukaryotic ones are in PBPe. Length = 219

 Score =  140 bits (356), Expect = 4e-34
 Identities = 56/227 (24%), Positives = 97/227 (42%), Gaps = 10/227 (4%)

Query: 36  LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
           L+ G N     F+    +G+  GFDVD  +A++  +     K++++ ++      AL+S 
Sbjct: 2   LRVGTNGDYPPFSFADEDGELTGFDVDLAKAIAKELG---LKVEFVEVSFDNLLTALKSG 58

Query: 96  QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155
           +ID+++     T  R   +   F    Y  GQ  ++ K   I S+  L G  + V AGTT
Sbjct: 59  KIDVVAAGMTITPERAKQV--DFSDPYYKSGQVILVRKDSPIKSLEDLKGKKVAVVAGTT 116

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
            E  L         +   + ++   E  AA +A R DA   D  AL AL   +  P   +
Sbjct: 117 GEELLKKL----YPEAKIVSYDSQAEALAALKAGRADAAVADAPALAALVKQHGLPELKI 172

Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNI 261
           +   + +    A A+ +GD E  + ++     +     L  I +K  
Sbjct: 173 VGDPLDTPEGYAFAVRKGDPELLDKINKALKELKADGTLKKIYEKWF 219