RPSBLAST alignment of GI: 254780170 and protein with PDBid: 2rc8

>2rc8_A Glutamate [NMDA] receptor subunit 3A; membrane protein, alternative splicing, calcium, cell junction, coiled coil, glycoprotein, ION transport; 1.45A {Rattus norvegicus} PDB: 2rc7_A 2rc9_A 2rca_A 2rcb_A Length = 294

 Score = 50.1 bits (118), Expect = 7e-07
 Identities = 32/259 (12%), Positives = 72/259 (27%), Gaps = 27/259 (10%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
             ++     LC          TN S    +  R F     +   V     K      G+ 
Sbjct: 19  FTREVDDEGLCPAGQLCLDPMTNDS---SMLDRLFSSLHSSNDTVPI---KFKKCCYGYC 72

Query: 61  VDFCRALSSAI--------FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           +D    L+  +          D     +   +       L S   ++   +      R  
Sbjct: 73  IDLLEQLAEDMNFDFDLYIVGDGKYGAWKNGHWTGLVGDLLSGTANMAVTSFSINTARSQ 132

Query: 113 SLGLAFRPITYFDGQGFIMHKKKG---ISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
              + F    +    G ++  +          +L   S   + GT  E +  DY +    
Sbjct: 133 V--IDFTSPFFSTSLGILVRTRGTELSGIHDPKLHHPSQGFRFGTVRESSAEDYVRQSFP 190

Query: 170 K-YHPIVFERVEEIDAAYRA-----HRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
           + +  +    V       +       + DA+  D + L    ++ D   + + +    + 
Sbjct: 191 EMHEYMRRYNVPATPDGVQYLKNDPEKLDAFIMDKALLDYE-VSIDADCKLLTVGKPFAI 249

Query: 224 SPLAPAIIQGDTEWYNIVS 242
                  +  ++   + +S
Sbjct: 250 EGYGIG-LPPNSPLTSNIS 267