RPSBLAST alignment of GI: 254780170 and protein with PDBid: 3del
>3del_B Arginine binding protein; alpha and beta protein (A/B), periplasmic protein, protein binding, transport protein; 1.92A {Chlamydia trachomatis} Length = 242
Score = 62.7 bits (151), Expect = 1e-10
Identities = 33/207 (15%), Positives = 58/207 (28%), Gaps = 10/207 (4%)
Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95
G N F V G+ GFD+D R +S+ + + + L L+
Sbjct: 13 FIVGTNATYPPFEFVDKRGEVVGFDIDLAREISNKLGK---TLDVREFSFDALILNLKQH 69
Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155
+ID + T R L ++ K + + S+ VQ GT
Sbjct: 70 RIDAVITGMSITPSRLKE-ILMIPYYGEEIKHLVLVFKGENKHPLPLTQYRSVAVQTGTY 128
Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD-ISALYALKLTNDRPSEH 214
E L + H + E+ + + A LK +
Sbjct: 129 QEAYLQSLSEVHIRSFDST-----LEVLMEVMHGKSPVAVLEPSIAQVVLKDFPALSTAT 183
Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIV 241
+ LP+ + +
Sbjct: 184 IDLPEDQWVLGYGIGVASDRPALALKI 210