HHsearch alignment for GI: 254780171 and conserved domain: COG4215
>COG4215 ArtQ ABC-type arginine transport system, permease component [Amino acid transport and metabolism].
Probab=100.00 E-value=0 Score=328.94 Aligned_cols=226 Identities=28% Similarity=0.460 Sum_probs=202.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
Q ss_conf 65269999999999999999999999999999999962642467877999999995014699999999998730121034
Q gi|254780171|r 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDH 161 (398)
Q Consensus 82 ~~sy~~a~~vGl~NTl~va~~givlatiLG~~iGi~RlS~N~ll~~la~~YVE~~RN~PLLlql~fwy~~v~~~lP~~~~ 161 (398)
T Consensus 3 ~~G~~~~l~~ga~~Tl~lAv~sl~lgl~lGl~~A~~kls~~r~lr~~~~~YtTv~RGvPELl~illiyfG~~~lL~~~~~ 82 (230)
T COG4215 3 LAGWGDELLQGALVTLELAVCSLILGLLLGLLGALGKLSKNRLLRLLGNVYTTVIRGVPELLLILLIYFGGQILLNTLAD 82 (230)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 77607999999999999999999999999999999986666067897543535542671999999999830999999998
Q ss_pred HHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHH
Q ss_conf 44103720352010003545355670046887788999999999999998643112233204554210103558999765
Q gi|254780171|r 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241 (398)
Q Consensus 162 ~~~~~~~~flsnRGL~iP~p~~~~g~~~~l~~lilaiila~~l~~~a~~~~~~tg~~~~~~~~~~~~~~~~p~l~~~~~~ 241 (398)
T Consensus 83 ----------------------------------------------------------------------------~--- 83 (230)
T COG4215 83 ----------------------------------------------------------------------------V--- 83 (230)
T ss_pred ----------------------------------------------------------------------------H---
T ss_conf ----------------------------------------------------------------------------7---
Q ss_pred HHHHHHHHHCCCCCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf 44433221001311126-82148789999999999977879999999998346367899989689989988898768999
Q gi|254780171|r 242 YQLHFDKPVLGQFNFIG-GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 (398)
Q Consensus 242 ~~~~~~~p~l~~f~~~g-G~~l~p~f~a~~iaL~l~taAyiaEivR~gI~sVpkGQ~EAA~aLGls~~q~~r~VIlPQAl 320 (398)
T Consensus 84 ------------~~~~g~~~idi~~FvaGviaL~~i~gAYatEt~RGA~~AVp~GQ~EAa~AlGms~~~~frrI~lPqm~ 151 (230)
T COG4215 84 ------------TGALGVGFIDISPFVAGVIALGLIFGAYATETLRGAFKAVPKGQIEAARALGLSRSQTFRRIVLPQMW 151 (230)
T ss_pred ------------HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf ------------30147774556749999999999999998999999997289651889998099876889999988899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCC
Q ss_conf 99741047899999975499999999999999999983137758999999999999999999999999678743-0479
Q gi|254780171|r 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL-KEKK 398 (398)
Q Consensus 321 R~~iP~l~nq~i~l~K~SSLa~~Ig~~dl~~~~~~~~~~t~~~~e~~~i~~~~Yl~isl~iS~~~n~~~rr~~l-~er~ 398 (398)
T Consensus 152 R~ALPGlgN~WlvllKDTALVSvIGl~dl~~~a~~aa~~Tk~pFtfy~~aa~iYL~~t~vS~~~l~~lErr~~rg~~r~ 230 (230)
T COG4215 152 RHALPGLGNLWLVLLKDTALVSLIGLNDLMRQTQLAAGSTKEPFTFYIVAALIYLVITLVSNVVLLFLERRASRGFERR 230 (230)
T ss_pred HHHCCCCCCHHHHHHHCCHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 9827885302677763003542115999999999873455554399999999999999999999999999854242579