HHsearch alignment for GI: 254780171 and conserved domain: COG4597
>COG4597 BatB ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].
Probab=100.00 E-value=0 Score=890.61 Aligned_cols=388 Identities=48% Similarity=0.782 Sum_probs=383.7
Q ss_pred CHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 82331103320388999999999999999999999999999999728877812138899844375422356865269999
Q gi|254780171|r 10 TRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 (398)
Q Consensus 10 ~~~~~~~~~~~d~~~~~~~~Q~~~~~~~~~~~~~l~~n~~~nl~~~gi~~gf~FL~~~agf~I~~~~i~y~~~~sy~~a~ 89 (398)
T Consensus 10 ~~~~~~~s~~~dp~~r~i~~Q~l~v~~l~~~v~wiv~NtitNLqr~~IasGf~FL~~rAgFdI~qtlI~y~s~~TYgra~ 89 (397)
T COG4597 10 RSTSKGSSLIYDPTVRGIFFQLLAVVALAGIVYWIVGNTVTNLQRRGIASGFAFLDGRAGFDIGQTLIAYTSDSTYGRAF 89 (397)
T ss_pred HHCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf 32157987400816999999999999999999998633554788626421046660667878332401047888335788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCE
Q ss_conf 99999999999999999999999999996264246787799999999501469999999999873012103444103720
Q gi|254780171|r 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM 169 (398)
Q Consensus 90 ~vGl~NTl~va~~givlatiLG~~iGi~RlS~N~ll~~la~~YVE~~RN~PLLlql~fwy~~v~~~lP~~~~~~~~~~~~ 169 (398)
T Consensus 90 ~VGllNTl~Va~~gIi~atIiGfliGIaRLS~NWLi~kl~~vYvEiFRNiPpLL~IfFWYf~Vl~~LP~ar~s~~l~~~~ 169 (397)
T COG4597 90 IVGLLNTLLVAALGIITATIIGFLIGIARLSDNWLIRKLSTVYVEIFRNIPPLLQIFFWYFGVLSVLPGARQSVSLPDLI 169 (397)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCE
T ss_conf 99889899999999999999999987777231389999989999998268579999999999995288700011156301
Q ss_pred EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHH
Q ss_conf 35201000354535567004688778899999999999999864311223320455421010355899976544433221
Q gi|254780171|r 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 (398)
Q Consensus 170 flsnRGL~iP~p~~~~g~~~~l~~lilaiila~~l~~~a~~~~~~tg~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~p 249 (398)
T Consensus 170 ~L~nrG~~~p~P~~geG~~~~~lA~~~~I~~s~~~~r~ak~rQ~~TGq~~~~~~~~~~LiiglPll~~~~~G~pl~~d~P 249 (397)
T COG4597 170 FLSNRGLYFPSPQWGEGFIAFILALVMAIVASVFLARWAKTRQIATGQQFRTWPTAAVLIIGLPLLAQWLFGAPLTFDVP 249 (397)
T ss_pred EECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHCCCCCEECCC
T ss_conf 35256401477310365179999999999999999999887787507857623568899845088999972897212052
Q ss_pred HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 00131112682148789999999999977879999999998346367899989689989988898768999997410478
Q gi|254780171|r 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 (398)
Q Consensus 250 ~l~~f~~~gG~~l~p~f~a~~iaL~l~taAyiaEivR~gI~sVpkGQ~EAA~aLGls~~q~~r~VIlPQAlR~~iP~l~n 329 (398)
T Consensus 250 ~~~~FNl~GG~~v~PEf~aL~laLs~YTaaFIAEiVRaGI~~VskGQtEAa~sLGL~~~~t~RlVivPQAlRiIIPPLTS 329 (397)
T COG4597 250 ALGGFNLTGGMVVIPEFAALFLALSFYTAAFIAEIVRAGIQAVSKGQTEAARSLGLRSSLTLRLVIVPQALRIIIPPLTS 329 (397)
T ss_pred CCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCEEEEEEECCCCEEECCCCCH
T ss_conf 11443566870565789999999999999999999987650257661778986289975447999841101564176218
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99999975499999999999999999983137758999999999999999999999999678743047
Q gi|254780171|r 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 (398)
Q Consensus 330 q~i~l~K~SSLa~~Ig~~dl~~~~~~~~~~t~~~~e~~~i~~~~Yl~isl~iS~~~n~~~rr~~l~er 397 (398)
T Consensus 330 QYLNLtKNSSLAiAIGYpDlv~vagT~lNQTGQAvEvv~i~m~vYL~lSL~tSl~MN~~N~rmalvER 397 (397)
T COG4597 330 QYLNLTKNSSLAIAIGYPDLVAVAGTVLNQTGQAVEVVAIWMLVYLSLSLTTSLLMNWYNRRMALVER 397 (397)
T ss_pred HHHHHCCCCHHHHCCCCCCEEEEECEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 88733235423200277766887330224556078999999999999999999999998765432049