HHsearch alignment for GI: 254780171 and conserved domain: PRK10352

>PRK10352 nickel transporter permease NikB; Provisional.
Probab=99.02  E-value=1.1e-07  Score=65.42  Aligned_cols=234  Identities=15%  Similarity=0.225  Sum_probs=152.6

Q ss_pred             HHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             213889984437542235686526999999999999999999999999999999996-2642467877999999995014
Q gi|254780171|r   62 GFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR-LSANKLVAWICRVYVEVFRNIP  140 (398)
Q Consensus        62 ~FL~~~agf~I~~~~i~y~~~~sy~~a~~vGl~NTl~va~~givlatiLG~~iGi~R-lS~N~ll~~la~~YVE~~RN~P  140 (398)
T Consensus        70 ~wl~~~l~GD~G~S---~~~~~pV~~~I~~~lp~Tl~L~~~a~~l~~~igi~lGi~aa~~~~~~~D~~~~~~~~~~~siP  146 (314)
T PRK10352         70 TWLWKALHLDFGIS---FATQRPVLDDMLNFLPATLELAGAALVLILLTSVPLGIWAARHRDRLPDFAVRFIAFLGVSMP  146 (314)
T ss_pred             HHHHHHHEECCCCC---CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
T ss_conf             99999922457876---636886089888763788999999999999998599999872079721013105899878731


Q ss_pred             HHHH--HHHHHHHHH-HHCCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             6999--999999987-3012103444103720352010003545355670046887788999999999999998643112
Q gi|254780171|r  141 PLVV--IFFLYKSVL-SVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK  217 (398)
Q Consensus       141 LLlq--l~fwy~~v~-~~lP~~~~~~~~~~~~flsnRGL~iP~p~~~~g~~~~l~~lilaiila~~l~~~a~~~~~~tg~  217 (398)
T Consensus       147 ~F~la~lli~~fa~~l~~~P~~------------------------g~~-------------------------------  171 (314)
T PRK10352        147 NFWLAFLLVMAFSVYLQWLPAM------------------------GYG-------------------------------  171 (314)
T ss_pred             HHHHHHHHHHHHHHHCCCCCCC------------------------CCC-------------------------------
T ss_conf             9999999999999964767876------------------------778-------------------------------


Q ss_pred             CCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHHH
Q ss_conf             233204554210103558999765444332210013111268214878999999999997787999999999834-6367
Q gi|254780171|r  218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV-PRGQ  296 (398)
Q Consensus       218 ~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~p~l~~f~~~gG~~l~p~f~a~~iaL~l~taAyiaEivR~gI~sV-pkGQ  296 (398)
T Consensus       172 -------------------------------------~~~-~l-iLP-----~l~l~l~~~a~~~r~~R~~~~e~l~~dy  207 (314)
T PRK10352        172 -------------------------------------GWQ-HI-ILP-----AVSIAFMSLAINARLLRASMLDVAGQRH  207 (314)
T ss_pred             -------------------------------------CHH-HH-HCH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             -------------------------------------336-54-111-----9999999999999999999999863299


Q ss_pred             HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH-HHHHHHCCCCHHHH-HHHHHHH
Q ss_conf             8999896899899888987689999974104789999997549999-9999999999-99998313775899-9999999
Q gi|254780171|r  297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV-AVGFADLVSV-GGTIINQTGQAIEI-ILIWMFI  373 (398)
Q Consensus       297 ~EAA~aLGls~~q~~r~VIlPQAlR~~iP~l~nq~i~l~K~SSLa~-~Ig~~dl~~~-~~~~~~~t~~~~e~-~~i~~~~  373 (398)
T Consensus       208 v~~ArakGls~~~i~~rh~lrnal~P~it~~~~~~~~ll~GavivE~iF~~pGlG~ll~~Ai~~rD~p~v~g~~l~~~~~  287 (314)
T PRK10352        208 VTWARLRGLSDRQVERRHILRNASLPMITAVGMHIGELIGGTMIIENIFAWPGVGRYAVSAIFNRDYPVIQCFTLMMVVV  287 (314)
T ss_pred             HHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_conf             99999869893136086528742988999999999998477610018754767599999999813889999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             999999999999999678743047
Q gi|254780171|r  374 YLSLSIMIALFMNRLNAKIALKEK  397 (398)
Q Consensus       374 Yl~isl~iS~~~n~~~rr~~l~er  397 (398)
T Consensus       288 ~v~~nli~Dily~~lDPRiR~~~g  311 (314)
T PRK10352        288 FVVCNLIVDLLNAALDPRIRRHEG  311 (314)
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf             999999999999964863157899