HHsearch alignment for GI: 254780171 and conserved domain: PRK10561

Probab=99.17  E-value=1.2e-07  Score=65.19  Aligned_cols=128  Identities=13%  Similarity=0.079  Sum_probs=73.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Q ss_conf             8999999999997787999999999834636789998968998998889876899999741047899999-975499999
Q gi|254780171|r  265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL-LKNSSLAVA  343 (398)
Q Consensus       265 ~f~a~~iaL~l~taAyiaEivR~gI~sVpkGQ~EAA~aLGls~~q~~r~VIlPQAlR~~iP~l~nq~i~l-~K~SSLa~~  343 (398)
T Consensus       142 a~~~vi~~~vW~~~g~~~li~lagL~~Ip~~l~EAA~iDGA~~~q~f~~ItlPll~p~~~~~~i~~~i~~~~~~f~~i~~  221 (280)
T PRK10561        142 AMFLVVFASVWKQISYNFLFFYAALQSIPRSLVEAAAIDGAGPIRRFFKLALPLIAPVSFFLLVVNLVYAFFDTFPVIDA  221 (280)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999998999999999985799779999997699775233123046105999999999999999965688864


Q ss_pred             H--HHH-HHH-HHHHHHHHCCCCHH--HHHHHHHHHHHHHHHHHHHHHH-HHHHHH
Q ss_conf             9--999-999-99999983137758--9999999999999999999999-996787
Q gi|254780171|r  344 V--GFA-DLV-SVGGTIINQTGQAI--EIILIWMFIYLSLSIMIALFMN-RLNAKI  392 (398)
Q Consensus       344 I--g~~-dl~-~~~~~~~~~t~~~~--e~~~i~~~~Yl~isl~iS~~~n-~~~rr~  392 (398)
T Consensus       222 ~t~GGP~~~t~~l~~~iy~~~f~~~~~g~asA~svil~~i~~~~~~i~~r~~~rkv  277 (280)
T PRK10561        222 ATSGGPVQATTTLIYKIYREGFTGLDLSSSAAQSVVLMFLVIVLTVVQFRYVESKV  277 (280)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE
T ss_conf             36888852889999999999987599619999999999999999999999983211