HHsearch alignment for GI: 254780171 and conserved domain: PRK10592
>PRK10592 putrescine transporter subunit: membrane component of ABC superfamily; Provisional.
Probab=99.43 E-value=9.8e-11 Score=84.12 Aligned_cols=129 Identities=20% Similarity=0.242 Sum_probs=94.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999778799999999983463678999896899899888987689999974104789999997549999999
Q gi|254780171|r 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 (398)
Q Consensus 266 f~a~~iaL~l~taAyiaEivR~gI~sVpkGQ~EAA~aLGls~~q~~r~VIlPQAlR~~iP~l~nq~i~l~K~SSLa~~Ig 345 (398)
T Consensus 140 ~~~i~i~~~~~~~P~~~~~i~a~l~~id~~leEAA~~LGAs~~~~f~~V~LPli~Pgiiag~il~F~~s~~ef~~~~~l~ 219 (281)
T PRK10592 140 MLTIWLAHVTFCTAYVAVVISSRLRELDRSIEEAAMDLGATPLKVFFVITLPMIMPAIISGWLLAFTLSLDDLVIASFVS 219 (281)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
T ss_conf 78999999999999999999999985892799999881999888834354171159899999999999998777886210
Q ss_pred HHHHHHHHHHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999998313--77589999999999999999999999996787430
Q gi|254780171|r 346 FADLVSVGGTIINQT--GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 (398)
Q Consensus 346 ~~dl~~~~~~~~~~t--~~~~e~~~i~~~~Yl~isl~iS~~~n~~~rr~~l~ 395 (398)
T Consensus 220 g~~~~TLpv~iy~~~~~~~~-p~~~A~~~l~~~v~~~~~~ia~~l~~R~~k~ 270 (281)
T PRK10592 220 GPGATTLPMLVFSSVRMGVN-PEINALATLILGVVGIVGFIAWYLMARAEKQ 270 (281)
T ss_pred CCCCCCHHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 89984569999999871798-7999999999999999999999999888988