HHsearch alignment for GI: 254780171 and conserved domain: PRK10683

>PRK10683 putrescine transporter subunit: membrane component of ABC superfamily; Provisional.
Probab=99.45  E-value=9.7e-10  Score=78.06  Aligned_cols=233  Identities=16%  Similarity=0.206  Sum_probs=140.4

Q ss_pred             CCCCCCCCCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             8998443754223568--6526999999999999999999999999999999--99626424678779999999950146
Q gi|254780171|r   66 ERAGFEIDQGIVPYTS--DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVG--AGRLSANKLVAWICRVYVEVFRNIPP  141 (398)
Q Consensus        66 ~~agf~I~~~~i~y~~--~~sy~~a~~vGl~NTl~va~~givlatiLG~~iG--i~RlS~N~ll~~la~~YVE~~RN~PL  141 (398)
T Consensus        73 ~~~~~~~~~~l~NY~~lf~d~---~y~~a~~nSL~iA~~sT~i~lliG~P~Ay~iar~~--~~~r~~l~~lvilP~~~s~  147 (317)
T PRK10683         73 ADGQLSITLNLGNFLQLTDDP---LYFDAYLQSLQVAAISTICCLLIGYPLAWAVAHSK--PSTRNILLLLVILPSWTSF  147 (317)
T ss_pred             CCCCEEEEECHHHHHHHHCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CCHHHHHHHHHHHHHHHHH
T ss_conf             566315644489899997697---89999999999999999999999999999999388--6178999999999970679


Q ss_pred             HHHHHHHHHHHHHHCCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             99999999998730121034441037203520100035453556700468877889999999999999986431122332
Q gi|254780171|r  142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL  221 (398)
Q Consensus       142 Llql~fwy~~v~~~lP~~~~~~~~~~~~flsnRGL~iP~p~~~~g~~~~l~~lilaiila~~l~~~a~~~~~~tg~~~~~  221 (398)
T Consensus       148 lVr~~aw~~iL-~------------------~~G~l----------n------------~--------------------  166 (317)
T PRK10683        148 LIRVYAWMGIL-K------------------NNGVL----------N------------N--------------------  166 (317)
T ss_pred             HHHHHHHHHHH-C------------------CCCHH----------H------------H--------------------
T ss_conf             99999999997-3------------------14348----------7------------8--------------------


Q ss_pred             EEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
Q ss_conf             04554210103558999765444332210013111268214878999999999997787999999999834636789998
Q gi|254780171|r  222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI  301 (398)
Q Consensus       222 ~~~~~~~~~~~p~l~~~~~~~~~~~~~p~l~~f~~~gG~~l~p~f~a~~iaL~l~taAyiaEivR~gI~sVpkGQ~EAA~  301 (398)
T Consensus       167 ------------~L~~--lG--l-i~~p----------l~ll~t~~aViig~v~~~lPfmvL~l~a~L~~id~~L~EAA~  219 (317)
T PRK10683        167 ------------FLLW--LG--V-IDQP----------LTILHTNLAVYIGIVYAYLPFMVLPIYTALTRIDYSLVEAAL  219 (317)
T ss_pred             ------------HHHH--HC--C-CCCC----------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_conf             ------------9999--60--4-4676----------322564589999999999999999999999858908999998


Q ss_pred             HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH--HHHHHHHHHHHHHHHH
Q ss_conf             96899899888987689999974104789999997549999999999999999998313775--8999999999999999
Q gi|254780171|r  302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA--IEIILIWMFIYLSLSI  379 (398)
Q Consensus       302 aLGls~~q~~r~VIlPQAlR~~iP~l~nq~i~l~K~SSLa~~Ig~~dl~~~~~~~~~~t~~~--~e~~~i~~~~Yl~isl  379 (398)
T Consensus       220 ~LGAs~~~~F~~VtLPL~~PGIiag~lLvFi~a~g~F~iP~lLGG~~~~~i~~~i~~~f~~~~dwp~aaAlavvLl~i~i  299 (317)
T PRK10683        220 DLGARPLKTFFSVIVPLTKGGIIAGSMLVFIPAVGEFVIPELLGGPDSIMIGRVLWQEFFNNRDWPVASAVAIIMLLLLI  299 (317)
T ss_pred             HCCCCHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_conf             76998655400232062189999999999999988877686642998562999999999874680589999999999999


Q ss_pred             HHHHHHHHHHHH
Q ss_conf             999999999678
Q gi|254780171|r  380 MIALFMNRLNAK  391 (398)
Q Consensus       380 ~iS~~~n~~~rr  391 (398)
T Consensus       300 v~~~~~~r~~~k  311 (317)
T PRK10683        300 VPIMWFHKHQQK  311 (317)
T ss_pred             HHHHHHHHHHHH
T ss_conf             999999999887