HHsearch alignment for GI: 254780171 and conserved domain: PRK10782
>PRK10782 DL-methionine transporter permease subunit; Provisional.
Probab=100.00 E-value=1.7e-41 Score=271.53 Aligned_cols=207 Identities=23% Similarity=0.342 Sum_probs=182.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 52699999999999999999999999999999999-------62642467877999999995014699999999998730
Q gi|254780171|r 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAG-------RLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155 (398)
Q Consensus 83 ~sy~~a~~vGl~NTl~va~~givlatiLG~~iGi~-------RlS~N~ll~~la~~YVE~~RN~PLLlql~fwy~~v~~~ 155 (398)
T Consensus 3 ~~~~~lll~g~~~Tl~mt~~s~~~~~iiglplGi~l~~~~~~~~~~~~~l~~~~~~~i~~~R~iP~lv~l~~~~~~~~~~ 82 (217)
T PRK10782 3 EAMMWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTRPGQIIANAKLYRTLSAVVNIFRSIPFIILLVWMIPFTRVI 82 (217)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 78999999999999999999999999999999999997320224434689999999999995068999999999999998
Q ss_pred CCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHH
Q ss_conf 12103444103720352010003545355670046887788999999999999998643112233204554210103558
Q gi|254780171|r 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235 (398)
Q Consensus 156 lP~~~~~~~~~~~~flsnRGL~iP~p~~~~g~~~~l~~lilaiila~~l~~~a~~~~~~tg~~~~~~~~~~~~~~~~p~l 235 (398)
T Consensus 83 ~------------------------------------------------------------------------------- 83 (217)
T PRK10782 83 V------------------------------------------------------------------------------- 83 (217)
T ss_pred H-------------------------------------------------------------------------------
T ss_conf 4-------------------------------------------------------------------------------
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHH
Q ss_conf 99976544433221001311126821487899999999999778799999999983463678999896899899888987
Q gi|254780171|r 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 (398)
Q Consensus 236 ~~~~~~~~~~~~~p~l~~f~~~gG~~l~p~f~a~~iaL~l~taAyiaEivR~gI~sVpkGQ~EAA~aLGls~~q~~r~VI 315 (398)
T Consensus 84 -----------------------g~~~--g~~aaiiaL~i~~~~~iar~~~~~i~~V~~g~~EAa~alG~s~~q~i~~vi 138 (217)
T PRK10782 84 -----------------------GTSI--GLQAAIVPLTVGAAPFIARMVENALLEIPTGLIEASRAMGATPMQIVRKVL 138 (217)
T ss_pred -----------------------CCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHH
T ss_conf -----------------------4662--168999999999989999999999983998799999983989889948510
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 6899999741047899999975499999999999999999983137758999999999999999999999999678743
Q gi|254780171|r 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 (398)
Q Consensus 316 lPQAlR~~iP~l~nq~i~l~K~SSLa~~Ig~~dl~~~~~~~~~~t~~~~e~~~i~~~~Yl~isl~iS~~~n~~~rr~~l 394 (398)
T Consensus 139 LPqAlp~ii~~~~~~~i~~i~~tsl~g~IG~ggLG~~a~~~~~~~~~~~~~~~v~-~l~~ilv~~i~~~~~~l~k~~~~ 216 (217)
T PRK10782 139 LPEALPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYGYIGYNATVMNTVL-VLLVILVYLIQFAGDRIVRAVTH 216 (217)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 7921999999999999999999999999810478999999999851510999999-99999999999999999998637