HHsearch alignment for GI: 254780171 and conserved domain: PRK10914
>PRK10914 dipeptide transporter permease DppB; Provisional.
Probab=99.16 E-value=4.6e-08 Score=67.83 Aligned_cols=261 Identities=16% Similarity=0.203 Sum_probs=158.9
Q ss_pred CHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHH
Q ss_conf 1213889984437542235686526999999999999999999999999999999996-264246787799999999501
Q gi|254780171|r 61 IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR-LSANKLVAWICRVYVEVFRNI 139 (398)
Q Consensus 61 f~FL~~~agf~I~~~~i~y~~~~sy~~a~~vGl~NTl~va~~givlatiLG~~iGi~R-lS~N~ll~~la~~YVE~~RN~ 139 (398)
T Consensus 67 ~~wl~~~l~Gd~G~S~---~~~~pV~~~i~~~lp~Tl~L~~~a~il~~~igi~lGi~aa~~~~~~~D~~~~~~~~~~~si 143 (339)
T PRK10914 67 LHYIWGVMHGDLGISL---KSRIPVWEEFVPRFKATLELGVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLALTGYSM 143 (339)
T ss_pred HHHHHHHHCCCCCCCC---CCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC
T ss_conf 9999998738888734---2688369999872725899999999999999999999999852751113678889861230
Q ss_pred HH-----HHHHHHHHHHHHHHCCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 46-----9999999999873012103444103720352010003545355670046887788999999999999998643
Q gi|254780171|r 140 PP-----LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214 (398)
Q Consensus 140 PL-----Llql~fwy~~v~~~lP~~~~~~~~~~~~flsnRGL~iP~p~~~~g~~~~l~~lilaiila~~l~~~a~~~~~~ 214 (398)
T Consensus 144 P~F~lallli~if--~~~l~~~P~~G~---~~~~~~~~-------~~~p~~g~~~------------------------- 186 (339)
T PRK10914 144 PIFWWGMMLIMLV--SVHWNLTPVSGR---VSDMVFLD-------DSNPLTGFML------------------------- 186 (339)
T ss_pred HHHHHHHHHHHHH--HHHHCCCCCCCC---CCCCCCCC-------CCCCCCCCCC-------------------------
T ss_conf 6999999999999--999574777676---76531246-------6666554100-------------------------
Q ss_pred HCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC-CC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Q ss_conf 112233204554210103558999765444332210013111268-21-48789999999999977879999999998-3
Q gi|254780171|r 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGG-ST-VSPEFMSLYIALSCYTAAFIAEIVRSGLI-A 291 (398)
Q Consensus 215 tg~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~p~l~~f~~~gG-~~-l~p~f~a~~iaL~l~taAyiaEivR~gI~-s 291 (398)
T Consensus 187 --------------------~~~~~~g~~~~~----------~~~l~hliLP-----~l~L~l~~~a~~~r~~R~~~~~~ 231 (339)
T PRK10914 187 --------------------IDTAIWGEDGNF----------IDAVAHMILP-----AIVLGTIPLAVIVRMTRSSMLEV 231 (339)
T ss_pred --------------------CCHHHHCCCHHH----------HHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHH
T ss_conf --------------------111420451137----------8899999999-----99999999999999999999999
Q ss_pred CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH-HHHHHHCCCCHHHH-HH
Q ss_conf 4636789998968998998889876899999741047899999975499999-999999999-99998313775899-99
Q gi|254780171|r 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA-VGFADLVSV-GGTIINQTGQAIEI-IL 368 (398)
Q Consensus 292 VpkGQ~EAA~aLGls~~q~~r~VIlPQAlR~~iP~l~nq~i~l~K~SSLa~~-Ig~~dl~~~-~~~~~~~t~~~~e~-~~ 368 (398)
T Consensus 232 l~~dyV~~ArakGl~~~~i~~~h~lrnal~P~it~~g~~~~~ll~GsvivE~vF~~pGiG~l~~~Ai~~rD~pvi~g~~l 311 (339)
T PRK10914 232 LGEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPVVQGGVL 311 (339)
T ss_pred HHHHHHHHHHHCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHH
T ss_conf 83499999998594933140498398609989999999999999769998698677576999999998358899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 9999999999999999999967874304
Q gi|254780171|r 369 IWMFIYLSLSIMIALFMNRLNAKIALKE 396 (398)
Q Consensus 369 i~~~~Yl~isl~iS~~~n~~~rr~~l~e 396 (398)
T Consensus 312 ~~~~~~i~~nli~Dil~~~lDPRiR~kr 339 (339)
T PRK10914 312 LVATMIILVNLLVDLLYGVVNPRIRHKK 339 (339)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 9999999999999999986284047889