HHsearch alignment for GI: 254780171 and conserved domain: PRK10952
>PRK10952 glycine betaine transporter membrane protein; Provisional.
Probab=99.06 E-value=5.4e-08 Score=67.43 Aligned_cols=222 Identities=15% Similarity=0.129 Sum_probs=127.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH-HHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 4678779999999950146999999999987301210344-410372035201000354535567004688778899999
Q gi|254780171|r 123 KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS-IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201 (398)
Q Consensus 123 ~ll~~la~~YVE~~RN~PLLlql~fwy~~v~~~lP~~~~~-~~~~~~~flsnRGL~iP~p~~~~g~~~~l~~lilaiila 201 (398)
T Consensus 88 ~~i~~~l~~~~~~L~~~P~~~~i~~~~-~law~~~g~~la~~t~~~l~~I~~~G~W~~aM---~TLalvlvav~~~~iiG 163 (354)
T PRK10952 88 VPVDYILNGFQQLLLGMPAPVAIIVFA-LIAWQISGVGMGVATLISLIAIGAIGAWSQAM---VTLALVLTALLFCIVIG 163 (354)
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHH-HHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHH---HHHHHHHHHHHHHHHHH
T ss_conf 999999999999980298899999999-99999804799999999999999966329999---99999999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999986431122332045542101035589997654443322100131112682148789999999999977879
Q gi|254780171|r 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281 (398)
Q Consensus 202 ~~l~~~a~~~~~~tg~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~p~l~~f~~~gG~~l~p~f~a~~iaL~l~taAyi 281 (398)
T Consensus 164 iplGI~~ars~r~~----~il~PiLD~mQT~P~FVYL---------iP~vmlFG----iG~----vpaviAtviyAlpP~ 222 (354)
T PRK10952 164 LPLGIWLARSPRAA----KIIRPLLDAMQTTPAFVYL---------VPIVMLFG----IGN----VPGVVVTIIFALPPI 222 (354)
T ss_pred HHHHHHHHCCHHHH----HHHHHHHHHHHCCHHHHHH---------HHHHHHHC----CCC----HHHHHHHHHHHCCHH
T ss_conf 99999997469999----9999999873113079999---------99999927----971----459999999973589
Q ss_pred HHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHC
Q ss_conf 999999998346367899989689989988898768999997410478999999754999999999999999--999831
Q gi|254780171|r 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG--GTIINQ 359 (398)
Q Consensus 282 aEivR~gI~sVpkGQ~EAA~aLGls~~q~~r~VIlPQAlR~~iP~l~nq~i~l~K~SSLa~~Ig~~dl~~~~--~~~~~~ 359 (398)
T Consensus 223 iR~T~lGir~Vp~~viEAa~~~G~T~~Q~L~kVeLPlA~P~ImaGvNQtimlaLsMvVIAa~IGagGLG~~Vl~gi~~~d 302 (354)
T PRK10952 223 IRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALSMVVIASMIAVGGLGQMVLRGIGRLD 302 (354)
T ss_pred HHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC
T ss_conf 99999999608888999999849998889898336024999999999999999999999999578866189999986224
Q ss_pred CCCHHHHHHH
Q ss_conf 3775899999
Q gi|254780171|r 360 TGQAIEIILI 369 (398)
Q Consensus 360 t~~~~e~~~i 369 (398)
T Consensus 303 ~G~gl~aGl~ 312 (354)
T PRK10952 303 MGLATVGGVG 312 (354)
T ss_pred HHHHHHHHHH
T ss_conf 3689999999