HHsearch alignment for GI: 254780171 and conserved domain: PRK11122
>PRK11122 artM arginine transporter permease subunit ArtM; Provisional.
Probab=100.00 E-value=0 Score=413.83 Aligned_cols=219 Identities=21% Similarity=0.407 Sum_probs=197.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
Q ss_conf 26999999999999999999999999999999996264246787799999999501469999999999873012103444
Q gi|254780171|r 84 SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163 (398)
Q Consensus 84 sy~~a~~vGl~NTl~va~~givlatiLG~~iGi~RlS~N~ll~~la~~YVE~~RN~PLLlql~fwy~~v~~~lP~~~~~~ 163 (398)
T Consensus 3 e~~P~ll~G~~~Tl~l~~~s~~~~~~lG~~la~~r~~~~~~l~~~~~~yv~~~Rg~PlLv~lf~~yfg~~~-~~~l~--- 78 (222)
T PRK11122 3 EYLPELLKGLHTSLTLTVASLLVALVLALIFTIILTLKTPVLVWLVRGYITLFTGTPLLVQIFLIYYGPGQ-FPWLQ--- 78 (222)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH-HHHHH---
T ss_conf 46999999999999999999999999999999999879778999999999999564699999999981488-87775---
Q ss_pred HCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHH
Q ss_conf 10372035201000354535567004688778899999999999999864311223320455421010355899976544
Q gi|254780171|r 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 (398)
Q Consensus 164 ~~~~~~flsnRGL~iP~p~~~~g~~~~l~~lilaiila~~l~~~a~~~~~~tg~~~~~~~~~~~~~~~~p~l~~~~~~~~ 243 (398)
T Consensus 79 -------------------------------------------------------------------------------- 78 (222)
T PRK11122 79 -------------------------------------------------------------------------------- 78 (222)
T ss_pred --------------------------------------------------------------------------------
T ss_conf --------------------------------------------------------------------------------
Q ss_pred HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 43322100131112682148789999999999977879999999998346367899989689989988898768999997
Q gi|254780171|r 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 (398)
Q Consensus 244 ~~~~~p~l~~f~~~gG~~l~p~f~a~~iaL~l~taAyiaEivR~gI~sVpkGQ~EAA~aLGls~~q~~r~VIlPQAlR~~ 323 (398)
T Consensus 79 ---~~~~~~------~-~~~~~~~~~viaL~l~~~Ay~aEi~R~gi~sV~~GQ~EAA~slGls~~q~~r-IilPQa~r~~ 147 (222)
T PRK11122 79 ---EYPWLW------H-LLSQPWLCAMLALALNSAAYSTQLFYGAIRAIPEGQWQSCSALGMSKKQTLA-ILLPYAFKRA 147 (222)
T ss_pred ---CCCHHH------H-HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHH-HHHHHHHHHH
T ss_conf ---030353------2-0225999999999999999999999999960998799999986989999999-8999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 410478999999754999999999999999999831377589999999999999999999999996787430479
Q gi|254780171|r 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 (398)
Q Consensus 324 iP~l~nq~i~l~K~SSLa~~Ig~~dl~~~~~~~~~~t~~~~e~~~i~~~~Yl~isl~iS~~~n~~~rr~~l~er~ 398 (398)
T Consensus 148 lP~l~n~~i~liK~TsL~s~Igv~El~~~a~~i~~~t~~~~-~y~~~a~~Y~~i~~~~~~~~~~lErR~~~~~rr 221 (222)
T PRK11122 148 LSSYSNEVVLVFKGTSLAYTITLMDVMGYSQLLYGRTYDVM-VFGAAGIIYLVVNGLLTLLMRLIERKALAFERR 221 (222)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 66889999999998499999989999999999997416099-999999999999999999999999987655335