HHsearch alignment for GI: 254780171 and conserved domain: PRK11275
>PRK11275 pstC phosphate transporter permease subunit; Provisional.
Probab=99.73 E-value=4.4e-13 Score=98.44 Aligned_cols=290 Identities=15% Similarity=0.208 Sum_probs=180.1
Q ss_pred HHHHCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCC-CCHHHH
Q ss_conf 233110332038899999999--99999999999999999999997288778121388998443754223568-652699
Q gi|254780171|r 11 RYFSRMKFLYDMRVHNISVQI--ILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTS-DSSYAT 87 (398)
Q Consensus 11 ~~~~~~~~~~d~~~~~~~~Q~--~~~~~~~~~~~~l~~n~~~nl~~~gi~~gf~FL~~~agf~I~~~~i~y~~-~~sy~~ 87 (398)
T Consensus 6 p~~~~~~R~~D~if~~l~~~~a~~~~~~l~~I~~~l~~~~~p~~~~~g----~~Fl~~~~----------W~p~~~~~Gi 71 (319)
T PRK11275 6 PAFNAPGKKGDIIFSALVKLAALITLLLLGGIIVSLIISSWPSIQKFG----LSFLWTKE----------WDPPNDIYGA 71 (319)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC----HHHHCCCC----------CCCCCCCCCC
T ss_conf 665679957869999999999999999999999999998899999718----37516999----------8998687782
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHC
Q ss_conf 999999999999999999999999999999--626424678779999999950146999999999987301210344410
Q gi|254780171|r 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAG--RLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165 (398)
Q Consensus 88 a~~vGl~NTl~va~~givlatiLG~~iGi~--RlS~N~ll~~la~~YVE~~RN~PLLlql~fwy~~v~~~lP~~~~~~~~ 165 (398)
T Consensus 72 ~~--~i~GTl~~s~iAllia~Plgi~~Aiyl~eya~~~-~~~~l~~~ielLagIPSVV~Gl~---Gl~v~~p~~~~~~~~ 145 (319)
T PRK11275 72 LV--PIYGTLVTSFIALLIAVPVSFGIALFLTELAPGW-LKRPLGIAIELLAAIPSIVYGMW---GLFVFAPLFATYFQE 145 (319)
T ss_pred HH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH-HHHHHHHHHHHHHCCCHHHHHHH---HHHHHHHHHHHHHHH
T ss_conf 99--9999999999999999999999999999976685-89899999999821758999999---999999999987545
Q ss_pred CCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHH
Q ss_conf 37203520100035453556700468877889999999999999986431122332045542101035589997654443
Q gi|254780171|r 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245 (398)
Q Consensus 166 ~~~~flsnRGL~iP~p~~~~g~~~~l~~lilaiila~~l~~~a~~~~~~tg~~~~~~~~~~~~~~~~p~l~~~~~~~~~~ 245 (398)
T Consensus 146 ---------------------------------------------~~~~---~~-------------------------- 151 (319)
T PRK11275 146 ---------------------------------------------PVGN---IL-------------------------- 151 (319)
T ss_pred ---------------------------------------------HHHH---HC--------------------------
T ss_conf ---------------------------------------------5654---41--------------------------
Q ss_pred HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 32210013111268214878999999999997787999999999834636789998968998998889876899999741
Q gi|254780171|r 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 (398)
Q Consensus 246 ~~~p~l~~f~~~gG~~l~p~f~a~~iaL~l~taAyiaEivR~gI~sVpkGQ~EAA~aLGls~~q~~r~VIlPQAlR~~iP 325 (398)
T Consensus 152 ~~~~~~~-~~~-~~~~~G~s~l~a~i~LaiMilP~i~s~s~eal~~VP~~~reaa~ALGatrw~ti~~VvlP~a~~GI~~ 229 (319)
T PRK11275 152 SNIPIVG-ALF-SGPAFGIGILAAGVILAIMIIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVIWRIVLPFTKNGVIG 229 (319)
T ss_pred CCHHHHH-HHH-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 2104677-761-47764402899999999999999999999999968899999999839979999999999988868999
Q ss_pred HHHHHHHHHHHHH-HHHHHHHHH------HHHHH----HHHHHHCCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 0478999999754-999999999------99999----9999831377-----589999999999999999999999996
Q gi|254780171|r 326 PLTSQYLNLLKNS-SLAVAVGFA------DLVSV----GGTIINQTGQ-----AIEIILIWMFIYLSLSIMIALFMNRLN 389 (398)
Q Consensus 326 ~l~nq~i~l~K~S-SLa~~Ig~~------dl~~~----~~~~~~~t~~-----~~e~~~i~~~~Yl~isl~iS~~~n~~~ 389 (398)
T Consensus 230 gviLg~gRAlGETmaV~mv~Gn~~~~~~~~lf~p~~Tlts~Ia~~~~ea~~g~~~~al~a~glvLfvit~i~N~~a~~iv 309 (319)
T PRK11275 230 GVMLGLGRALGETMAVTFIIGNTYQLDSASLYMPGNSITSALANEFAEAESGLHTAALMELGLILFVITFIVLAASKLMI 309 (319)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999998899999992787668987645655089999999631357748999999999999999999999999999
Q ss_pred HHHHHHC
Q ss_conf 7874304
Q gi|254780171|r 390 AKIALKE 396 (398)
Q Consensus 390 rr~~l~e 396 (398)
T Consensus 310 ~R~~k~~ 316 (319)
T PRK11275 310 MRLAKNE 316 (319)
T ss_pred HHHHHHC
T ss_conf 9987523