RPSBLAST alignment for GI: 254780171 and conserved domain: pfam00528

>gnl|CDD|144205 pfam00528, BPD_transp_1, Binding-protein-dependent transport system inner membrane component. The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices. Length = 183

 Score = 43.4 bits (103), Expect = 1e-04
 Identities = 26/130 (20%), Positives = 54/130 (41%), Gaps = 3/130 (2%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
            +   I      A +   I R+ L ++P   +EAA ALG +  +  R ++LP A+  I+ 
Sbjct: 52  ILPAIILALLGWAGYARLIRRAALRSLPSDLVEAARALGASRWQIFRKIILPNALPPILT 111

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVS---VGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
            L   +   L  + L   +G    +    +   +     +    +L    I L L++++ 
Sbjct: 112 GLALAFGGALGGAVLLEFLGSWPGLGLLLIEAILGYDYPEIQGPVLAAALILLLLNLLVD 171

Query: 383 LFMNRLNAKI 392
           +    L+ ++
Sbjct: 172 ILQRLLDPRV 181