HHsearch alignment for GI: 254780172 and conserved domain: COG0555
>COG0555 CysU ABC-type sulfate transport system, permease component [Posttranslational modification, protein turnover, chaperones].
Probab=99.34 E-value=2e-11 Score=87.39 Aligned_cols=220 Identities=18% Similarity=0.222 Sum_probs=144.0
Q ss_pred HHHHHHHHHHHHCCCCCCCC-----CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
Q ss_conf 99999889885133335741-----1111100247877999999999998756775444127868899978988887614
Q gi|254780172|r 148 LFGLFPIFSFFVLYGGLGLS-----IVETSLWGGLLVTLVISFFGIIISMPLGILLALGRNSNIPVLRYACITFIELFRG 222 (386)
Q Consensus 148 ~~~~~pil~~~Ll~gg~gl~-----~V~t~~~gGl~~Tl~l~~~~~~~~~~lG~llal~r~s~~~~l~~~~~~~ie~~Rg 222 (386)
T Consensus 25 l~~llPl~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~S~~~a~~atl~~~vfg~~~a~vL~R~~fpgk~lvdaivDlP~a 104 (274)
T COG0555 25 LILLLPLSALVTKSSSLGWAGFWSALTSPRVLAALKLTLLTAFAATLLNLVFGLPLAWVLVRYDFPGKRLVDALVDLPFA 104 (274)
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCC
T ss_conf 99999999999974335689999996489899999999999999999999999899898540358848999999627613
Q ss_pred CCHHHHHH--HHHHH----HHHHC-CCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHH
Q ss_conf 72289999--99997----66415-588773-879999999999989998999999998458667899999621689999
Q gi|254780172|r 223 VPLVTVLF--MASIM----LPLFL-PDTWDV-DKLLRALLGVSAFASAYIAEVLRGGLQSISKGQFEAANSLGLSYLQKM 294 (386)
Q Consensus 223 ~Pli~~lf--~~~~~----lp~~l-p~g~~~-~~~~~a~i~l~l~~aAy~aEi~Rggl~svp~GQ~EAA~alGls~~q~~ 294 (386)
T Consensus 105 lP~~VaGiaLl~l~~~~g~~g~~~~~~gi~~~~t~~GVivA~~Fvs~Pf~vr~v~~~~~~id~~~EeaA~sLGas~~~tf 184 (274)
T COG0555 105 LPTAVAGIALLLLFGPNGLLGSLLAPLGIKFAFTPLGVIVAMFFVSLPFVVRTVQPVLEEIDREYEEAARSLGASPLQTF 184 (274)
T ss_pred CCHHHHHHHHHHHHCCCCCCHHHHCCCCCEEECCHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEE
T ss_conf 75489999999996678740355412475676467899999999703368998899998556889999986489855111
Q ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH----------------HHHHHHHHHHHHCCCCCHHHHHHHHH
Q ss_conf 99996998998620047999999961289999999999----------------99999974101003551369999999
Q gi|254780172|r 295 RLIIMPQVIKRVIPGIVNTFIGLFKDSSLISIINMFDL----------------LGIVRVNFSESTWISSVTPTTGLIFI 358 (386)
Q Consensus 295 ~~IilPQAlr~~iP~l~n~~i~l~KdTsL~~~Ig~~el----------------~~~~~~~~~~~~~~~~~~~~e~y~~~ 358 (386)
T Consensus 185 ~~V~lP~l~pall-----------~G~~LsfaR~igEfGavl~iAgn~p~~t~~~pl~--Iy~~--~~~~--d~~~A~ai 247 (274)
T COG0555 185 RRVILPLLLPALL-----------AGFILSFARSIGEFGAVLIIAGNTPYKTETLPLL--IYTR--LESY--DLEAAAAI 247 (274)
T ss_pred EEEEHHHCHHHHH-----------HHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHH--HHHH--HHHC--CCHHHHHH
T ss_conf 4244641338999-----------9999999998245464999814777877303899--9999--9837--93579999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 99999999999999999999843378
Q gi|254780172|r 359 GFVFWIFCFSISLYSVFIEKTLHKGS 384 (386)
Q Consensus 359 a~iY~ii~~~ls~~~~~lE~rl~~~~ 384 (386)
T Consensus 248 s~vll~iS~~~l~~~r~~~~~~~r~~ 273 (274)
T COG0555 248 SVVLLLISFILLLVIRLLQSRARRRE 273 (274)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999999999987642057