HHsearch alignment for GI: 254780172 and conserved domain: COG0600
>COG0600 TauC ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism].
Probab=99.46 E-value=9.9e-11 Score=83.29 Aligned_cols=193 Identities=19% Similarity=0.255 Sum_probs=124.5
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHH
Q ss_conf 10024787799999999999875677544412786889997898888761472289999999976641558877387999
Q gi|254780172|r 172 SLWGGLLVTLVISFFGIIISMPLGILLALGRNSNIPVLRYACITFIELFRGVPLVTVLFMASIMLPLFLPDTWDVDKLLR 251 (386)
Q Consensus 172 ~~~gGl~~Tl~l~~~~~~~~~~lG~llal~r~s~~~~l~~~~~~~ie~~Rg~Pli~~lf~~~~~lp~~lp~g~~~~~~~~ 251 (386)
T Consensus 58 ~L~~~~~~Sl~rv~~Gf~la~~~gi~lgil~g-~~~~~~~~l~P~i~~l~~iP~lA~~Pl~ilwf------G~g~~s-~i 129 (258)
T COG0600 58 ELFQHLLASLLRVLLGFALAAVLGIPLGILMG-LSRLLERLLDPLVQVLRPIPPLALAPLAILWF------GIGETS-KI 129 (258)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH------HCCCCH-HH
T ss_conf 59999999999999999999999999999998-57999999969999993177799999999999------079611-99
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999899989999999984586678999996216899999999699899862004799999996128999999999
Q gi|254780172|r 252 ALLGVSAFASAYIAEVLRGGLQSISKGQFEAANSLGLSYLQKMRLIIMPQVIKRVIPGIVNTFIGLFKDSSLISIINMFD 331 (386)
Q Consensus 252 a~i~l~l~~aAy~aEi~Rggl~svp~GQ~EAA~alGls~~q~~~~IilPQAlr~~iP~l~n~~i~l~KdTsL~~~Ig~~e 331 (386)
T Consensus 130 ~i~~~~~ffp--i~int~~Gvr~v~~~~~~~ar~lgas~~~~l~~v~lP~AlP~i~tgLRia~g-----~aw~~~V-vaE 201 (258)
T COG0600 130 VIAVLGAFFP--ILINTLDGVRSVDPDLLELARTLGASRWQILRKVILPAALPYIFTGLRIAIG-----LAWIGLV-VAE 201 (258)
T ss_pred HHHHHHHHHH--HHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHH-----HHHHHHH-HHH
T ss_conf 9999999999--9999999987189999999998098977787762053007899999999999-----9999999-999
Q ss_pred HHHHH----HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 99999----997410100355136999999999999999999999999999843378
Q gi|254780172|r 332 LLGIV----RVNFSESTWISSVTPTTGLIFIGFVFWIFCFSISLYSVFIEKTLHKGS 384 (386)
Q Consensus 332 l~~~~----~~~~~~~~~~~~~~~~e~y~~~a~iY~ii~~~ls~~~~~lE~rl~~~~ 384 (386)
T Consensus 202 ~l~a~~GLG~~i~~a~~----~~~~~~v~a~i~~i~~lgll~d~~v~~~er~~~~w~ 254 (258)
T COG0600 202 LLGASSGLGYLILDARN----NLQTDLVFAAILVIALLGLLLDRLVRLLERRLLRWR 254 (258)
T ss_pred HHHCCCCHHHHHHHHHH----HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 97056668799999998----516789999999999999999999999999985212