HHsearch alignment for GI: 254780172 and conserved domain: COG4176
>COG4176 ProW ABC-type proline/glycine betaine transport system, permease component [Amino acid transport and metabolism].
Probab=99.18 E-value=3.1e-09 Score=74.27 Aligned_cols=231 Identities=17% Similarity=0.270 Sum_probs=136.2
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 43056899999999999740001112333468999998898851333357411111100247877999999999998756
Q gi|254780172|r 116 RWRPILVFLTGSILLTPMLIPSFPRKFLNSILLFGLFPIFSFFVLYGGLGLSIVETSLWGGLLVTLVISFFGIIISMPLG 195 (386)
Q Consensus 116 ~WRv~la~ill~vll~~~l~~~~~~k~~~~l~~~~~~pil~~~Ll~gg~gl~~V~t~~~gGl~~Tl~l~~~~~~~~~~lG 195 (386)
T Consensus 51 ~~~pp~l~i~i~~~la~~~~-----~~~-----~~i~t~~~l~~I-~~-------~GlW~~tM~TLaLVl~a~~isivIG 112 (290)
T COG4176 51 LAVPPLLLILIVALLAWFAS-----GLG-----LAIFTLLGLLLI-GN-------LGLWDQTMQTLALVLTATLISIVIG 112 (290)
T ss_pred HHCCHHHHHHHHHHHHHHHH-----HHH-----HHHHHHHHHHHH-HH-------HCHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 63589999999999999997-----515-----999999999999-98-------1508999999999999999999980
Q ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 77544412786889997898888761472289999999976641558877387999999999998999899999999845
Q gi|254780172|r 196 ILLALGRNSNIPVLRYACITFIELFRGVPLVTVLFMASIMLPLFLPDTWDVDKLLRALLGVSAFASAYIAEVLRGGLQSI 275 (386)
Q Consensus 196 ~llal~r~s~~~~l~~~~~~~ie~~Rg~Pli~~lf~~~~~lp~~lp~g~~~~~~~~a~i~l~l~~aAy~aEi~Rggl~sv 275 (386)
T Consensus 113 iPlGI~~-ar~~~~~~i~~PiLDlMQTmP~FV------YLIPav~lFGlG~---VPg~iAtvIfA~PP~IRlT~LGIrqV 182 (290)
T COG4176 113 IPLGIWA-ARSPRVYRIVRPILDLMQTMPTFV------YLIPAVMLFGLGN---VPGLIATVIFAMPPMIRLTNLGIRQV 182 (290)
T ss_pred CHHHHHH-HCCHHHHHHHHHHHHHHHCCCHHH------HHHHHHHHCCCCC---CCEEEEEEEEECCCHHHHHHCCCCCC
T ss_conf 0489998-536889999968999986054279------9999999907888---76341365653681587763241017
Q ss_pred CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH-HHHHHHHHHH----HHHHHHHHHHHHHHCCCCCH
Q ss_conf 866789999962168999999996998998620047999999961-2899999999----99999999741010035513
Q gi|254780172|r 276 SKGQFEAANSLGLSYLQKMRLIIMPQVIKRVIPGIVNTFIGLFKD-SSLISIINMF----DLLGIVRVNFSESTWISSVT 350 (386)
Q Consensus 276 p~GQ~EAA~alGls~~q~~~~IilPQAlr~~iP~l~n~~i~l~Kd-TsL~~~Ig~~----el~~~~~~~~~~~~~~~~~~ 350 (386)
T Consensus 183 p~eliEA~~AFG~t~~Q~L~kVqLPlA~PtIMaGi-NQtIMlALsMVVIAsMIGa~GLG~~Vl~~i~~ld-------ig~ 254 (290)
T COG4176 183 PAELIEAADAFGATPRQKLFKVQLPLALPTIMAGI-NQTIMLALSMVVIASMIGAGGLGQEVLRGIQRLD-------IGL 254 (290)
T ss_pred CHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHH-HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH-------HHH
T ss_conf 89999999970898888978720743077899866-7999999999999998757877689999988721-------377
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 699999999999999999999999999984337899
Q gi|254780172|r 351 PTTGLIFIGFVFWIFCFSISLYSVFIEKTLHKGSKK 386 (386)
Q Consensus 351 ~~e~y~~~a~iY~ii~~~ls~~~~~lE~rl~~~~rR 386 (386)
T Consensus 255 g~~----aGlaIVilAIiLDRitq~~~~~~~~~~~~ 286 (290)
T COG4176 255 GFE----AGLAIVILAIILDRLTQAFGRKAKSRHRR 286 (290)
T ss_pred HHH----HHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 776----30899999999999988845453102212