HHsearch alignment for GI: 254780172 and conserved domain: COG4209

>COG4209 LplB ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism].
Probab=98.55  E-value=2.1e-05  Score=51.32  Aligned_cols=198  Identities=17%  Similarity=0.214  Sum_probs=109.2

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHHCCCCH-HHHHHHHHHHHHHHCCC--------
Q ss_conf             0024787799999999999875677544412-7868899978988887614722-89999999976641558--------
Q gi|254780172|r  173 LWGGLLVTLVISFFGIIISMPLGILLALGRN-SNIPVLRYACITFIELFRGVPL-VTVLFMASIMLPLFLPD--------  242 (386)
Q Consensus       173 ~~gGl~~Tl~l~~~~~~~~~~lG~llal~r~-s~~~~l~~~~~~~ie~~Rg~Pl-i~~lf~~~~~lp~~lp~--------  242 (386)
T Consensus        77 ff~i~rNTl~~s~~~li~gf~~pI~lAillnElr~~~~kk~~QT~----~y~PhFlSWVVv~~~v~~fls~d~GiiN~ll  152 (309)
T COG4209          77 FFIILRNTLLYSVLFLILGFPVPIILAILLNELRNKVFKKVVQTI----SYLPHFLSWVVVSGFVFAFLSIDGGIINQLL  152 (309)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHCHHEEEHHHHHHHHHHHCCCCCHHHHHH
T ss_conf             999999999999999999537999999999999877788887663----3300021003056578876366751899999


Q ss_pred             ---CC------CCCHHHHH-HHHHHHH-HHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHH
Q ss_conf             ---87------73879999-9999999-8999899999999845866789999962168999999996998998620047
Q gi|254780172|r  243 ---TW------DVDKLLRA-LLGVSAF-ASAYIAEVLRGGLQSISKGQFEAANSLGLSYLQKMRLIIMPQVIKRVIPGIV  311 (386)
Q Consensus       243 ---g~------~~~~~~~a-~i~l~l~-~aAy~aEi~Rggl~svp~GQ~EAA~alGls~~q~~~~IilPQAlr~~iP~l~  311 (386)
T Consensus       153 ~~~g~~pi~fl~~~~wf~~i~i~~~vWK~~G~~SIiylAai~~Idpt~YEAA~vDGA~rwqqiwhITlP~i~P~ivIllI  232 (309)
T COG4209         153 MSLGGDPINFLTNPDWFRPIIIFSSVWKGAGWNSIIYLAAIAGIDPTLYEAAMVDGASRWQQIWHITLPAIRPLIVILLI  232 (309)
T ss_pred             HHCCCCCEEHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHH
T ss_conf             98289831021588602678878988842367889999999727999999998054887788882110323149999999


Q ss_pred             HHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             99999996----------12899999999999999997410100355136999999999999999999999999999843
Q gi|254780172|r  312 NTFIGLFK----------DSSLISIINMFDLLGIVRVNFSESTWISSVTPTTGLIFIGFVFWIFCFSISLYSVFIEKTLH  381 (386)
Q Consensus       312 n~~i~l~K----------dTsL~~~Ig~~el~~~~~~~~~~~~~~~~~~~~e~y~~~a~iY~ii~~~ls~~~~~lE~rl~  381 (386)
T Consensus       233 L~iG~i~~~gFe~~yll~~~~~~~v~~vld-tYVy~~gl~~Gd----~s-~--sTAaGlf~svVg~iLl~~aN~iakr~~  304 (309)
T COG4209         233 LNIGNIFNAGFELFYLLPNPSGYDVTEVLD-TYVYRGGLVTGD----YS-Y--STAAGLFQSVVGFILLFLANRIAKRFD  304 (309)
T ss_pred             HHHHHHHHCCHHHEEEECCCCCCCHHHHHH-HHHHHHCCCCCC----CC-H--HHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             985237653725606605766874898999-999981013575----11-8--999999999999999999999999706


Q ss_pred             C
Q ss_conf             3
Q gi|254780172|r  382 K  382 (386)
Q Consensus       382 ~  382 (386)
T Consensus       305 ~  305 (309)
T COG4209         305 N  305 (309)
T ss_pred             C
T ss_conf             2