HHsearch alignment for GI: 254780172 and conserved domain: COG4597
>COG4597 BatB ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].
Probab=100.00 E-value=1.9e-43 Score=279.65 Aligned_cols=208 Identities=27% Similarity=0.469 Sum_probs=185.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH-------------
Q ss_conf 0024787799999999999875677544412786889997898888761472289999999976641-------------
Q gi|254780172|r 173 LWGGLLVTLVISFFGIIISMPLGILLALGRNSNIPVLRYACITFIELFRGVPLVTVLFMASIMLPLF------------- 239 (386)
Q Consensus 173 ~~gGl~~Tl~l~~~~~~~~~~lG~llal~r~s~~~~l~~~~~~~ie~~Rg~Pli~~lf~~~~~lp~~------------- 239 (386)
T Consensus 89 ~~VGllNTl~Va~~gIi~atIiGfliGIaRLS~NWLi~kl~~vYvEiFRNiPpLL~IfFWYf~Vl~~LP~ar~s~~l~~~ 168 (397)
T COG4597 89 FIVGLLNTLLVAALGIITATIIGFLIGIARLSDNWLIRKLSTVYVEIFRNIPPLLQIFFWYFGVLSVLPGARQSVSLPDL 168 (397)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 89988989999999999999999998777723138999998999999826857999999999999528870001115630
Q ss_pred ---------CCC--------------------------------------------------------------------
Q ss_conf ---------558--------------------------------------------------------------------
Q gi|254780172|r 240 ---------LPD-------------------------------------------------------------------- 242 (386)
Q Consensus 240 ---------lp~-------------------------------------------------------------------- 242 (386)
T Consensus 169 ~~L~nrG~~~p~P~~geG~~~~~lA~~~~I~~s~~~~r~ak~rQ~~TGq~~~~~~~~~~LiiglPll~~~~~G~pl~~d~ 248 (397)
T COG4597 169 IFLSNRGLYFPSPQWGEGFIAFILALVMAIVASVFLARWAKTRQIATGQQFRTWPTAAVLIIGLPLLAQWLFGAPLTFDV 248 (397)
T ss_pred EEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHCCCCCEECC
T ss_conf 13525640147731036517999999999999999999988778750785762356889984508899997289721205
Q ss_pred ----------CC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHH
Q ss_conf ----------87-7387999999999998999899999999845866789999962168999999996998998620047
Q gi|254780172|r 243 ----------TW-DVDKLLRALLGVSAFASAYIAEVLRGGLQSISKGQFEAANSLGLSYLQKMRLIIMPQVIKRVIPGIV 311 (386)
Q Consensus 243 ----------g~-~~~~~~~a~i~l~l~~aAy~aEi~Rggl~svp~GQ~EAA~alGls~~q~~~~IilPQAlr~~iP~l~ 311 (386)
T Consensus 249 P~~~~FNl~GG~~v~PEf~aL~laLs~YTaaFIAEiVRaGI~~VskGQtEAa~sLGL~~~~t~RlVivPQAlRiIIPPLT 328 (397)
T COG4597 249 PALGGFNLTGGMVVIPEFAALFLALSFYTAAFIAEIVRAGIQAVSKGQTEAARSLGLRSSLTLRLVIVPQALRIIIPPLT 328 (397)
T ss_pred CCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCEEEEEEECCCCEEECCCCC
T ss_conf 21144356687056578999999999999999999998765025766177898628997544799984110156417621
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 99999996128999999999999999974101003551369999999999999999999999999998433789
Q gi|254780172|r 312 NTFIGLFKDSSLISIINMFDLLGIVRVNFSESTWISSVTPTTGLIFIGFVFWIFCFSISLYSVFIEKTLHKGSK 385 (386)
Q Consensus 312 n~~i~l~KdTsL~~~Ig~~el~~~~~~~~~~~~~~~~~~~~e~y~~~a~iY~ii~~~ls~~~~~lE~rl~~~~r 385 (386)
T Consensus 329 SQYLNLtKNSSLAiAIGYpDlv~vagT~lNQT-----GQAvEvv~i~m~vYL~lSL~tSl~MN~~N~rmalvER 397 (397)
T COG4597 329 SQYLNLTKNSSLAIAIGYPDLVAVAGTVLNQT-----GQAVEVVAIWMLVYLSLSLTTSLLMNWYNRRMALVER 397 (397)
T ss_pred HHHHHHCCCCHHHHCCCCCCEEEEECEEECCC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 88873323542320027776688733022455-----6078999999999999999999999998765432049