HHsearch alignment for GI: 254780172 and conserved domain: PRK09471
>PRK09471 oppB oligopeptide transporter permease; Reviewed.
Probab=99.01 E-value=4.3e-08 Score=67.42 Aligned_cols=218 Identities=16% Similarity=0.247 Sum_probs=139.5
Q ss_pred CCCCCCCCC------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCCHHHHHHHHHHHHHHCCCCHH----HH
Q ss_conf 333357411------111100247877999999999998756775444-1278688999789888876147228----99
Q gi|254780172|r 160 LYGGLGLSI------VETSLWGGLLVTLVISFFGIIISMPLGILLALG-RNSNIPVLRYACITFIELFRGVPLV----TV 228 (386)
Q Consensus 160 l~gg~gl~~------V~t~~~gGl~~Tl~l~~~~~~~~~~lG~llal~-r~s~~~~l~~~~~~~ie~~Rg~Pli----~~ 228 (386)
T Consensus 71 l~GD~G~S~~~~~~~V~~~i~~~lp~Tl~L~~~a~~i~~~lgi~lGi~aa~~~~~~~D~~~~~~~~~~~siP~F~la~ll 150 (306)
T PRK09471 71 AHGDFGPSFKYKDYSVNDLVASSFPVSAKLGAAAFFLAVILGVSAGVIAALKQNTKWDYTVMGFAMTGVVIPSFVVAPLL 150 (306)
T ss_pred HCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 68988776726898889999988899999999999999999999999999834751619999999999998999999999
Q ss_pred HHHHHHHHHHHCCCCCCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHH-CCHHHHHHHHHHCCHHHHHHHHHHHHHHHH
Q ss_conf 99999976641558877387---99999999999899989999999984-586678999996216899999999699899
Q gi|254780172|r 229 LFMASIMLPLFLPDTWDVDK---LLRALLGVSAFASAYIAEVLRGGLQS-ISKGQFEAANSLGLSYLQKMRLIIMPQVIK 304 (386)
Q Consensus 229 lf~~~~~lp~~lp~g~~~~~---~~~a~i~l~l~~aAy~aEi~Rggl~s-vp~GQ~EAA~alGls~~q~~~~IilPQAlr 304 (386)
T Consensus 151 i~iF~~~l~~~P~~g~~~~~~~~liLP~~~l~l~~~~~~~r~~R~~~~~~l~~dyV~~ArakGl~~~~i~~rh~lrnal~ 230 (306)
T PRK09471 151 VMIFAIILHWLPGGGWNGGALKFMILPMVALSLAYIASIARITRGSMIEVLHSNFIRTARAKGLPMRRIILRHALKPALL 230 (306)
T ss_pred HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHH
T ss_conf 88999721763778887520788753699999999999999999999999877999999986998400730012984299
Q ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 86200479999999612899999999999999997410100355136999-99999999999999999999999984
Q gi|254780172|r 305 RVIPGIVNTFIGLFKDSSLISIINMFDLLGIVRVNFSESTWISSVTPTTG-LIFIGFVFWIFCFSISLYSVFIEKTL 380 (386)
Q Consensus 305 ~~iP~l~n~~i~l~KdTsL~~~Ig~~el~~~~~~~~~~~~~~~~~~~~e~-y~~~a~iY~ii~~~ls~~~~~lE~rl 380 (386)
T Consensus 231 P~it~~~~~~~~ll~GsvivE--~iF~~PGiG~l~~~Ai~-~~D~p~v~g~~l~~a~~~i~~nll~Dil~~~lDPRi 304 (306)
T PRK09471 231 PVLSYMGPAFVGIITGSMVIE--TIFGLPGIGQLFVNGAL-NRDYSLVLSLTILVGALTILFNAIVDVLYAVIDPKI 304 (306)
T ss_pred HHHHHHHHHHHHHHCCHHHHH--HHHCCCCHHHHHHHHHH-HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 999999999999845871210--98647675999999998-049899999999999999999999999999729755