HHsearch alignment for GI: 254780172 and conserved domain: PRK09494
>PRK09494 glnP glutamine ABC transporter permease protein; Reviewed.
Probab=100.00 E-value=0 Score=415.09 Aligned_cols=204 Identities=27% Similarity=0.413 Sum_probs=197.2
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHH
Q ss_conf 10024787799999999999875677544412786889997898888761472289999999976641558877387999
Q gi|254780172|r 172 SLWGGLLVTLVISFFGIIISMPLGILLALGRNSNIPVLRYACITFIELFRGVPLVTVLFMASIMLPLFLPDTWDVDKLLR 251 (386)
Q Consensus 172 ~~~gGl~~Tl~l~~~~~~~~~~lG~llal~r~s~~~~l~~~~~~~ie~~Rg~Pli~~lf~~~~~lp~~lp~g~~~~~~~~ 251 (386)
T Consensus 14 ~ll~Gl~~Tl~l~~~s~~~g~~lG~~~a~~r~~~~~~l~~~~~~yv~~~RgtPlLv~lf~~yfglp~l~-~~i~~~~~~~ 92 (219)
T PRK09494 14 LLLEGAKMTLWISVLGLAGGLVIGLLAGFARAYGGWIANHIALVFIELIRGTPIVVQVMFIYFALPMAF-NDLRIDPFSA 92 (219)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC-CCCCCCHHHH
T ss_conf 999999999999999999999999999999988968999999999999976489999999999899854-6777489999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999899989999999984586678999996216899999999699899862004799999996128999999999
Q gi|254780172|r 252 ALLGVSAFASAYIAEVLRGGLQSISKGQFEAANSLGLSYLQKMRLIIMPQVIKRVIPGIVNTFIGLFKDSSLISIINMFD 331 (386)
Q Consensus 252 a~i~l~l~~aAy~aEi~Rggl~svp~GQ~EAA~alGls~~q~~~~IilPQAlr~~iP~l~n~~i~l~KdTsL~~~Ig~~e 331 (386)
T Consensus 93 ~vi~l~l~~~Ay~aEi~R~gi~sVp~GQ~EAA~alG~s~~q~~r~IilPQa~r~~lP~l~n~~i~liK~Tsl~s~Igv~E 172 (219)
T PRK09494 93 AVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRRETLRYVIGPLALRRMLPPLGNQWIISIKDTSLFIVIGVAE 172 (219)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999998318799999885989888989646998799988788999999999879999998999
Q ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 99999997410100355136999999999999999999999999999843
Q gi|254780172|r 332 LLGIVRVNFSESTWISSVTPTTGLIFIGFVFWIFCFSISLYSVFIEKTLH 381 (386)
Q Consensus 332 l~~~~~~~~~~~~~~~~~~~~e~y~~~a~iY~ii~~~ls~~~~~lE~rl~ 381 (386)
T Consensus 173 l~~~a~~i~~~t-----~~~~e~~~~~a~iY~~l~~~l~~~~~~lErrl~ 217 (219)
T PRK09494 173 LTRQGQEIIAGN-----FRALEIWSAVAVIYLIITLVLSFILRRLERRMK 217 (219)
T ss_pred HHHHHHHHHHCC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 999999999710-----718999999999999999999999999998771