HHsearch alignment for GI: 254780172 and conserved domain: PRK09497
>PRK09497 potB spermidine/putrescine ABC transporter membrane protein; Reviewed.
Probab=99.55 E-value=1.7e-13 Score=99.85 Aligned_cols=211 Identities=17% Similarity=0.085 Sum_probs=129.1
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH------HHHHCC-C
Q ss_conf 111002478779999999999987567754441278688999789888876147228999999997------664155-8
Q gi|254780172|r 170 ETSLWGGLLVTLVISFFGIIISMPLGILLALGRNSNIPVLRYACITFIELFRGVPLVTVLFMASIM------LPLFLP-D 242 (386)
Q Consensus 170 ~t~~~gGl~~Tl~l~~~~~~~~~~lG~llal~r~s~~~~l~~~~~~~ie~~Rg~Pli~~lf~~~~~------lp~~lp-~ 242 (386)
T Consensus 58 ~~~~~~~l~nSl~~a~~~tvi~~~ig~~~A~~l~~~~~~~r~~~~~l~~~P~~~p~~v~~~~~~~~~~~~G~ln~~l~~l 137 (285)
T PRK09497 58 DPLYAEVLLHSLNMALIATLACLVLGYPFAWFLAKLPHKVRPLLLFLLIVPFWTNSLIRIYGLKIFLGTKGYLNEFLLWL 137 (285)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC
T ss_conf 38999999999999999999999999998886301675438999999999998799999999999814330788999981
Q ss_pred CC---C---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHH
Q ss_conf 87---7---38799999999999899989999999984586678999996216899999999699899862004799999
Q gi|254780172|r 243 TW---D---VDKLLRALLGVSAFASAYIAEVLRGGLQSISKGQFEAANSLGLSYLQKMRLIIMPQVIKRVIPGIVNTFIG 316 (386)
Q Consensus 243 g~---~---~~~~~~a~i~l~l~~aAy~aEi~Rggl~svp~GQ~EAA~alGls~~q~~~~IilPQAlr~~iP~l~n~~i~ 316 (386)
T Consensus 138 g~~~~p~~~l~~~~~vii~~v~~~lPf~~l~l~a~l~~i~~~l~EAA~~lGAs~~~~F~~I~lPl~~Pgi~~~~il~fi~ 217 (285)
T PRK09497 138 GVIDTPIRIMFTESAVIIGLVYILLPFMVLPLYSSIEKLDKPLLEAARDLGANKLQTFIRIIIPLTMPGIIAGCLLVLLP 217 (285)
T ss_pred CCCCCCHHHHCCHHHHHHHHHEEECHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHEEHHEEEHHHHHHHHHHHHHHHHH
T ss_conf 57566235423498887875313120677437878840896899999875999789132022081089999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 9961289999999999999999741010035513699999999999999999999999999984337
Q gi|254780172|r 317 LFKDSSLISIINMFDLLGIVRVNFSESTWISSVTPTTGLIFIGFVFWIFCFSISLYSVFIEKTLHKG 383 (386)
Q Consensus 317 l~KdTsL~~~Ig~~el~~~~~~~~~~~~~~~~~~~~e~y~~~a~iY~ii~~~ls~~~~~lE~rl~~~ 383 (386)
T Consensus 218 s~~~F~~~~~lgG~~~~~l~~~i~~~~~-~~~~~~~--aaA~svil~~i~~~~~~i~~r~~k~~~kk 281 (285)
T PRK09497 218 AMGMFYVSDLLGGAKNLLIGNVIKSQFL-NIRDWPF--GAATSITLTIVMGLMLLVYYRASKLLNKK 281 (285)
T ss_pred HHHHHHEEEECCCCCCCHHHHHHHHHHH-HCCCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHCCH
T ss_conf 9887621001048975529999999998-7069069--99999999999999999999999995301