HHsearch alignment for GI: 254780172 and conserved domain: PRK10417
>PRK10417 nikC nickel transporter permease NikC; Provisional.
Probab=99.23 E-value=2e-09 Score=75.42 Aligned_cols=197 Identities=13% Similarity=0.153 Sum_probs=143.3
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHH
Q ss_conf 11002478779999999999987567754441278688999789888876147228999999997664155887738799
Q gi|254780172|r 171 TSLWGGLLVTLVISFFGIIISMPLGILLALGRNSNIPVLRYACITFIELFRGVPLVTVLFMASIMLPLFLPDTWDVDKLL 250 (386)
Q Consensus 171 t~~~gGl~~Tl~l~~~~~~~~~~lG~llal~r~s~~~~l~~~~~~~ie~~Rg~Pli~~lf~~~~~lp~~lp~g~~~~~~~ 250 (386)
T Consensus 60 srll~G~r~sl~i~l~~~~~~~~iG~~lG~~ag~~gg~~d~~~~~~~d~~~~iP~lll~i~l~---~~~---g~---~~~ 130 (272)
T PRK10417 60 SRLMAGTRVSLGSVMACLLLVLALGLVIGGSAGLLGGRVDQATMRVADMFMTFPTSILSFFMV---GVL---GT---GLT 130 (272)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHH---HHC---CC---CCH
T ss_conf 999999999999999999999999999999999718761247777788986286287788888---644---89---725
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999998999899999999845-866789999962168999999996998998620047999999961289999999
Q gi|254780172|r 251 RALLGVSAFASAYIAEVLRGGLQSI-SKGQFEAANSLGLSYLQKMRLIIMPQVIKRVIPGIVNTFIGLFKDSSLISIINM 329 (386)
Q Consensus 251 ~a~i~l~l~~aAy~aEi~Rggl~sv-p~GQ~EAA~alGls~~q~~~~IilPQAlr~~iP~l~n~~i~l~KdTsL~~~Ig~ 329 (386)
T Consensus 131 ~~il~l~l~~w~~~ar~iR~~~l~~~~~~yV~AAr~~G~s~~~I~~rhilPni~~~i~v~~~~~~~~~Il~~a~LsFLGl 210 (272)
T PRK10417 131 NVIIAIALSHWAWYARMVRSLVISLRQREFVLASRLSGAGHVRVFVDHLLGAVIPSLLVLATLDIGHMMLHVAGLSFLGL 210 (272)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 89999999889999999999999999899999999839587783220176763789999999999999999999999047
Q ss_pred H---------HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 9---------999999997410100355136999999999999999999999999999843378
Q gi|254780172|r 330 F---------DLLGIVRVNFSESTWISSVTPTTGLIFIGFVFWIFCFSISLYSVFIEKTLHKGS 384 (386)
Q Consensus 330 ~---------el~~~~~~~~~~~~~~~~~~~~e~y~~~a~iY~ii~~~ls~~~~~lE~rl~~~~ 384 (386)
T Consensus 211 G~~pp~~~WG~ml~~~~~~l~~------~-p-w~~~~P~~~i~l~vl~~nllgd~Lrd~ldP~l 266 (272)
T PRK10417 211 GVTAPTAEWGVMINDARQFIWT------Q-P-LLMFWPGLALFISVMAFNLLGDALRDHLDPHL 266 (272)
T ss_pred CCCCCCCCHHHHHHHHHHHHHH------C-H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 8999998899999999999997------8-4-99999999999999999999999999609664