HHsearch alignment for GI: 254780172 and conserved domain: TIGR00974
>TIGR00974 3a0107s02c phosphate ABC transporter, permease protein PstA; InterPro: IPR005672 Bacterial binding protein-dependent transport systems , are multicomponent systems typically composed of a periplasmic substrate-binding protein, one or two reciprocally homologous integral inner-membrane proteins and one or two peripheral membrane ATP-binding proteins that couple energy to the active transport system. The integral inner-membrane proteins translocate the substrate across the membrane. It has been shown , that most of these proteins contain a conserved region located about 80 to 100 residues from their C-terminal extremity. This region seems to be located in a cytoplasmic loop between two transmembrane domains. Apart from the conserved region, the sequence of these proteins is quite divergent, and they have a variable number of transmembrane helices,; GO: 0005315 inorganic phosphate transmembrane transporter activity, 0015114 phosphate transmembrane transporter activity, 0006817 phosphate transport, 0009276 1-2nm peptidoglycan-based cell wall.
Probab=99.40 E-value=2.5e-12 Score=92.92 Aligned_cols=204 Identities=19% Similarity=0.250 Sum_probs=135.9
Q ss_pred HHHH----HHHHHHHHHHHHHHHHHHHHH--HHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH----HCCCCC
Q ss_conf 2478----779999999999987567754--441278688999789888876147228999999997664----155887
Q gi|254780172|r 175 GGLL----VTLVISFFGIIISMPLGILLA--LGRNSNIPVLRYACITFIELFRGVPLVTVLFMASIMLPL----FLPDTW 244 (386)
Q Consensus 175 gGl~----~Tl~l~~~~~~~~~~lG~lla--l~r~s~~~~l~~~~~~~ie~~Rg~Pli~~lf~~~~~lp~----~lp~g~ 244 (386)
T Consensus 57 GGi~~AivGT~~~~~~~~~ia~PlGi~~aiYL~EYa~~~~~~~~ir~~~~~LaG~PSIv~GLFg~~~fv~~~~i~l--~~ 134 (302)
T TIGR00974 57 GGIGPAIVGTLLLILLAIVIAVPLGIGAAIYLAEYAKEGRFTKFIRFAVDVLAGVPSIVVGLFGYALFVKTLGIYL--GG 134 (302)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HH
T ss_conf 5336779999999999999999999998887553067894005687888875211699999999999997768645--22
Q ss_pred CCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
Q ss_conf 738799999-9999998999899999999845866789999962168999999996998998620047999999961289
Q gi|254780172|r 245 DVDKLLRAL-LGVSAFASAYIAEVLRGGLQSISKGQFEAANSLGLSYLQKMRLIIMPQVIKRVIPGIVNTFIGLFKDSSL 323 (386)
Q Consensus 245 ~~~~~~~a~-i~l~l~~aAy~aEi~Rggl~svp~GQ~EAA~alGls~~q~~~~IilPQAlr~~iP~l~n~~i~l~KdTsL 323 (386)
T Consensus 135 ~~S-~laG~~LaLa~L~LP~iirtTeEal~~VP~~~Reas~ALGa~Kw~TI~~~vLP~A~~GI~TG~iL~iaR~~GETAP 213 (302)
T TIGR00974 135 GFS-ALAGALLALAILILPVIIRTTEEALKAVPKDLREASLALGATKWQTILKIVLPAALPGILTGIILSIARAAGETAP 213 (302)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 067-7879999999999999999989999724788889999726002113322441310368999999999999998999
Q ss_pred H-HH-HHHHH--------------------HHHHHHH-------HHHHHHCCCCCHH--HHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9-99-99999--------------------9999999-------7410100355136--999999999999999999999
Q gi|254780172|r 324 I-SI-INMFD--------------------LLGIVRV-------NFSESTWISSVTP--TTGLIFIGFVFWIFCFSISLY 372 (386)
Q Consensus 324 ~-~~-Ig~~e--------------------l~~~~~~-------~~~~~~~~~~~~~--~e~y~~~a~iY~ii~~~ls~~ 372 (386)
T Consensus 214 Ll~TA~~~~~~~~~~~~~N~~~~~p~~~d~l~~~~~~L~~~iY~~~~~~-~~~~~~~~~~~~a~~aalvL~~~vl~~N~~ 292 (302)
T TIGR00974 214 LLFTAGGSSSFLLGNSVLNDLPKAPLGEDLLLSPPAALPVLIYNLASEL-ANAPYSEARNELAWAAALVLIVLVLLLNLI 292 (302)
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999998877641035667776777775422576413688888764014-678842688899999999999999999999
Q ss_pred HHHHHHHHCC
Q ss_conf 9999998433
Q gi|254780172|r 373 SVFIEKTLHK 382 (386)
Q Consensus 373 ~~~lE~rl~~ 382 (386)
T Consensus 293 a~~~~~~~~~ 302 (302)
T TIGR00974 293 ARLLRRRFKK 302 (302)
T ss_pred HHHHHHHHCC
T ss_conf 9999975249