HHsearch alignment for GI: 254780172 and conserved domain: TIGR03226
>TIGR03226 PhnU 2-aminoethylphosphonate ABC transporter, permease protein. This ABC transporter permease (membrane-spanning) component is found in a region of the salmonella typhimurium LT2 genome responsible for the catabolism of 2-aminoethylphosphonate via the phnWX pathway (GenProp0238).
Probab=99.70 E-value=1.6e-14 Score=105.97 Aligned_cols=220 Identities=18% Similarity=0.190 Sum_probs=146.9
Q ss_pred CCCCCCCCCC-----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH
Q ss_conf 3333574111-----111002478779999999999987567754441-2786889997898888761472289999999
Q gi|254780172|r 160 LYGGLGLSIV-----ETSLWGGLLVTLVISFFGIIISMPLGILLALGR-NSNIPVLRYACITFIELFRGVPLVTVLFMAS 233 (386)
Q Consensus 160 l~gg~gl~~V-----~t~~~gGl~~Tl~l~~~~~~~~~~lG~llal~r-~s~~~~l~~~~~~~ie~~Rg~Pli~~lf~~~ 233 (386)
T Consensus 72 ~~g~~gl~ny~~~f~~~~~~~al~nTl~~a~~~t~~~lvlG~~lA~~L~r~~f~-g~~~l~~ll~lp~~lP~~v~a~a~~ 150 (312)
T TIGR03226 72 AHGEIGLAAFRHFFASHDFRDALGNTLQIAFAAAAGALLLGSALAAILFFIPFP-GAELIGRFLDLFIAFPSFLIAFAFI 150 (312)
T ss_pred CCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 989863999999977967999999999999999999999999999999962376-2899999999999988999999999
Q ss_pred HHHHH------HCC--CCCCC------CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHH
Q ss_conf 97664------155--88773------87999999999998999899999999845866789999962168999999996
Q gi|254780172|r 234 IMLPL------FLP--DTWDV------DKLLRALLGVSAFASAYIAEVLRGGLQSISKGQFEAANSLGLSYLQKMRLIIM 299 (386)
Q Consensus 234 ~~lp~------~lp--~g~~~------~~~~~a~i~l~l~~aAy~aEi~Rggl~svp~GQ~EAA~alGls~~q~~~~Iil 299 (386)
T Consensus 151 ~l~~~~G~ln~~L~~l~gl~~~p~~~l~s~~gVvla~i~~~~Pf~~l~~~a~l~~id~~l~EAA~~lGAs~~~~Fr~VtL 230 (312)
T TIGR03226 151 FIYGSAGLLNGALMRAFAFDAPPLDFLFGAGGVILAEITFFTPFVMRPLLAAFAQIDKRLLEAASILGAHGLMLAGQVIF 230 (312)
T ss_pred HHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf 99835770779999962866774577740999999999998999999999999968978999998849998886787427
Q ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99899862004799999996128999999999999999974101003551369999999999999999999999999998
Q gi|254780172|r 300 PQVIKRVIPGIVNTFIGLFKDSSLISIINMFDLLGIVRVNFSESTWISSVTPTTGLIFIGFVFWIFCFSISLYSVFIEKT 379 (386)
Q Consensus 300 PQAlr~~iP~l~n~~i~l~KdTsL~~~Ig~~el~~~~~~~~~~~~~~~~~~~~e~y~~~a~iY~ii~~~ls~~~~~lE~r 379 (386)
T Consensus 231 Pll~P~i~ag~lL~Fi~~~~~F~~~~~lgg~~~~tl~~~Iy~~~~~~~---d~~~AaAlavillv~~l~l~~l~r~~~rR 307 (312)
T TIGR03226 231 PAALPAIAAGGILCFLLTLNEFGILLFIGAAGLITLPMAIYSKAILDI---DLPAAAAGALIMIALSLALFALYRLAARR 307 (312)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEHHHHHHHHHHHCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 846899999999999999977541134408997017999999998757---98999999999999999999999999876
Q ss_pred HCCC
Q ss_conf 4337
Q gi|254780172|r 380 LHKG 383 (386)
Q Consensus 380 l~~~ 383 (386)
T Consensus 308 ~~~~ 311 (312)
T TIGR03226 308 AGEG 311 (312)
T ss_pred CCCC
T ss_conf 3489