HHSEARCH alignment of GI: 254780172 and SCOP domain: d3d31c1

Alignment
>d3d31c1 f.58.1.1 (C:13-260) Sulfate/molybdate ABC transporter, permease protein {Methanosarcina acetivorans [TaxId: 2214]}
Probab=99.71  E-value=1.5e-15  Score=109.38  Aligned_cols=165  Identities=17%  Similarity=0.232  Sum_probs=131.9

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH-C------C
Q ss_conf             1110024787799999999999875677544412-786889997898888761472289999999976641-5------5
Q gi|254780172|r  170 ETSLWGGLLVTLVISFFGIIISMPLGILLALGRN-SNIPVLRYACITFIELFRGVPLVTVLFMASIMLPLF-L------P  241 (386)
Q Consensus       170 ~t~~~gGl~~Tl~l~~~~~~~~~~lG~llal~r~-s~~~~l~~~~~~~ie~~Rg~Pli~~lf~~~~~lp~~-l------p  241 (386)
                      +.+.+..+..|+.+++.+..++.++|..+|.... ++.+ .|........+-..+|.++.-+.....+... .      .
T Consensus        42 ~~~~~~~l~~Sl~~a~~s~~i~~~lg~~~a~~~~~~~~~-~~~~~~~l~~~p~~ip~vv~~~~~~~~~~~~~~~~~~~~~  120 (248)
T d3d31c1          42 NRSVISSIFLSLYAGFLATLLALLLGAPTGYILARFDFP-GKRLVESIIDVPVVVPHTVAGIALLTVFGSRGLIGEPLES  120 (248)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCT-THHHHHHHHHGGGTSCHHHHHHHHHHHHSTTSTTTGGGTT
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCC
T ss_conf             989999999999999999999999999999999864651-2568999999999999720002445203432111112222


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Q ss_conf             88773879999999999989998999999998458667899999621689999999969989986200479999999612
Q gi|254780172|r  242 DTWDVDKLLRALLGVSAFASAYIAEVLRGGLQSISKGQFEAANSLGLSYLQKMRLIIMPQVIKRVIPGIVNTFIGLFKDS  321 (386)
Q Consensus       242 ~g~~~~~~~~a~i~l~l~~aAy~aEi~Rggl~svp~GQ~EAA~alGls~~q~~~~IilPQAlr~~iP~l~n~~i~l~KdT  321 (386)
                      .....+.+...+++.+....+|....++++++++|+++.|||+++|.|+||++|+|++||+.+..+.+..-.++..++|.
T Consensus       121 ~~~~~~~~~~iii~~~~~~~p~~~~~~~~~l~~i~~~~~eAA~~lGas~~~~~~~I~lP~~~p~i~~~~~l~f~~~~~~~  200 (248)
T d3d31c1         121 YIQFRDALPGIVVAMLFVSMPYLANSAREGFKSVDPRLENAARSLGAPLWKAFFFVTLPLSARYLLIGSVMTWARAISEF  200 (248)
T ss_dssp             TCCCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTCCHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCEEEHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             11245642001001101100368888899997103368999876310423477898899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHH
Q ss_conf             89999999999999
Q gi|254780172|r  322 SLISIINMFDLLGI  335 (386)
Q Consensus       322 sL~~~Ig~~el~~~  335 (386)
                      .....+|-...+..
T Consensus       201 ~~~~~l~~~~~~~~  214 (248)
T d3d31c1         201 GAVVILAYYPMVGP  214 (248)
T ss_dssp             HHHHHHHCTTCCHH
T ss_pred             HHHHHHCCCCCHHH
T ss_conf             98873318984099


SCOP domain information

class: Membrane and cell surface proteins and peptides
fold: MetI-like
superfamily: MetI-like
family: MetI-like
domain: Sulfate/molybdate ABC transporter, permease protein
species: Methanosarcina acetivorans [TaxId: 2214]