RPSBLAST alignment for GI: 254780173 and conserved domain: TIGR02203
>gnl|CDD|131258 TIGR02203, MsbA_lipidA, lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes. Length = 571
Score = 122 bits (309), Expect = 7e-29
Identities = 74/214 (34%), Positives = 109/214 (50%), Gaps = 14/214 (6%)
Query: 32 ALRDINLNVLRGERVIIAGPSGSGKSTLIRCINHIEKHQAGEIIINGIPLNDDIRNIHEV 91
AL I+L + GE V + G SGSGKSTL+ I + +G+I+++G L D + +
Sbjct: 347 ALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILLDGHDLAD--YTLASL 404
Query: 92 RRDVGMVFQHFNLFSNLSVLENCTLGPIWVRKMPKKDAEE-LAMHYLNKV--KIADKSH- 147
RR V +V Q LF N ++ N G + + + E LA Y K+
Sbjct: 405 RRQVALVSQDVVLF-NDTIANNIAYGRT--EQADRAEIERALAAAYAQDFVDKLPLGLDT 461
Query: 148 ---RSSSLLSGGESQRAAIARSLCMQPKIMLFDEPTSALDPEMVKEVLDIMIELAEEGMT 204
+ LLSGG+ QR AIAR+L I++ DE TSALD E + V + L + T
Sbjct: 462 PIGENGVLLSGGQRQRLAIARALLKDAPILILDEATSALDNESERLVQAALERLMQGRTT 521
Query: 205 MVCVTHEMGFARQVADRVVFMDQGQIVEQNSPEE 238
+V + H + + ADR+V MD G+IVE+ + E
Sbjct: 522 LV-IAHRLS-TIEKADRIVVMDDGRIVERGTHNE 553