RPSBLAST alignment for GI: 254780173 and conserved domain: TIGR02211
>gnl|CDD|131266 TIGR02211, LolD_lipo_ex, lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina. Length = 221
Score = 149 bits (377), Expect = 8e-37
Identities = 75/208 (36%), Positives = 118/208 (56%), Gaps = 15/208 (7%)
Query: 33 LRDINLNVLRGERVIIAGPSGSGKSTLIRCINHIEKHQAGEIIINGIPLND-------DI 85
L+ ++L++ +GE V I G SGSGKSTL+ + ++ +GE++ NG L+ +
Sbjct: 21 LKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKL 80
Query: 86 RNIHEVRRDVGMVFQHFNLFSNLSVLENCTLGPIWVRKMPKKDAEELAMHYLNKVKIADK 145
RN +G ++Q +L + + LEN + P+ + K K+A+E A L KV + +
Sbjct: 81 RNKK-----LGFIYQFHHLLPDFTALENVAM-PLLIGKKSVKEAKERAYEMLEKVGLEHR 134
Query: 146 SHRSSSLLSGGESQRAAIARSLCMQPKIMLFDEPTSALDPEMVKEVLDIMIEL-AEEGMT 204
+ S LSGGE QR AIAR+L QP ++L DEPT LD K + D+M+EL E +
Sbjct: 135 INHRPSELSGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTS 194
Query: 205 MVCVTHEMGFARQVADRVVFMDQGQIVE 232
+ VTH++ A++ DRV+ M GQ+
Sbjct: 195 FLVVTHDLELAKK-LDRVLEMKDGQLFN 221