RPSBLAST alignment for GI: 254780173 and conserved domain: TIGR02857
>gnl|CDD|163042 TIGR02857, CydD, thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD. Length = 529
Score = 120 bits (303), Expect = 3e-28
Identities = 66/210 (31%), Positives = 98/210 (46%), Gaps = 33/210 (15%)
Query: 32 ALRDINLNVLRGERVIIAGPSGSGKSTLIRCINHIEKHQAGEIIINGIPLNDDIRNIHEV 91
ALR ++ V GERV + GPSG+GKSTL+ + G I +NG+PL D +
Sbjct: 337 ALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLAD--ADADSW 394
Query: 92 RRDVGMVFQHFNLFSNLSVLENCTLGPIWVRKMPKKDAEELAM---------HYLNKV-- 140
R + V QH LF+ ++ EN L + DA + +
Sbjct: 395 RDQIAWVPQHPFLFAG-TIAENIRLA--------RPDASDAEIRRALERAGLDEFVAALP 445
Query: 141 -----KIADKSHRSSSLLSGGESQRAAIARSLCMQPKIMLFDEPTSALDPEMVKEVLDIM 195
I + LSGG++QR A+AR+ ++L DEPT+ LD E V + +
Sbjct: 446 QGLDTLIGEGGAG----LSGGQAQRLALARAFLRDAPLLLLDEPTAHLDAETEALVTEAL 501
Query: 196 IELAEEGMTMVCVTHEMGFARQVADRVVFM 225
LA +G T++ VTH + A ADR+V +
Sbjct: 502 RALA-QGRTVLLVTHRLALAE-RADRIVVL 529