RPSBLAST alignment for GI: 254780173 and conserved domain: cd03229
>gnl|CDD|72988 cd03229, ABC_Class3, This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.. Length = 178
Score = 212 bits (541), Expect = 8e-56
Identities = 87/213 (40%), Positives = 123/213 (57%), Gaps = 36/213 (16%)
Query: 18 VEIKFLNKWYGNFHALRDINLNVLRGERVIIAGPSGSGKSTLIRCINHIEKHQAGEIIIN 77
+E+K ++K YG L D++LN+ GE V + GPSGSGKSTL+RCI +E+ +G I+I+
Sbjct: 1 LELKNVSKRYGQKTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEEPDSGSILID 60
Query: 78 GIPLNDDIRNIHEVRRDVGMVFQHFNLFSNLSVLENCTLGPIWVRKMPKKDAEELAMHYL 137
G L D + +RR +GMVFQ F LF +L+VLEN LG
Sbjct: 61 GEDLTDLEDELPPLRRRIGMVFQDFALFPHLTVLENIALG-------------------- 100
Query: 138 NKVKIADKSHRSSSLLSGGESQRAAIARSLCMQPKIMLFDEPTSALDPEMVKEVLDIMIE 197
LSGG+ QR A+AR+L M P ++L DEPTSALDP +EV ++
Sbjct: 101 ---------------LSGGQQQRVALARALAMDPDVLLLDEPTSALDPITRREVRALLKS 145
Query: 198 LAEE-GMTMVCVTHEMGFARQVADRVVFMDQGQ 229
L + G+T+V VTH++ A ++ADRVV + G+
Sbjct: 146 LQAQLGITVVLVTHDLDEAARLADRVVVLRDGK 178