RPSBLAST alignment for GI: 254780173 and conserved domain: cd03236

>gnl|CDD|72995 cd03236, ABC_RNaseL_inhibitor_domain1, The ATPase domain 1 of RNase L inhibitor. The ABC ATPase, RNase L inhibitor (RLI), is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI s are not transport proteins and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLIs have an N-terminal Fe-S domain and two nucleotide binding domains which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.. Length = 255

 Score = 56.0 bits (135), Expect = 1e-08
 Identities = 53/198 (26%), Positives = 89/198 (44%), Gaps = 32/198 (16%)

Query: 43  GERVIIAGPSGSGKSTLIRCINHIEKHQAGEIIIN-----GIPLNDDIRNIHEVRRDVGM 97
           G+ + + GP+G GKST ++ +       AG++  N       P  D+I  + E R   G 
Sbjct: 26  GQVLGLVGPNGIGKSTALKIL-------AGKLKPNLGKFDDPPDWDEI--LDEFR---GS 73

Query: 98  VFQHFNLFSNLSVLE-NCTLGPIWVRKMPK------------KDAEELAMHYLNKVKIAD 144
             Q  N F+ L   +    + P +V  +PK            KD        ++++++  
Sbjct: 74  ELQ--NYFTKLLEGDVKVIVKPQYVDLIPKAVKGKVGELLKKKDERGKLDELVDQLELRH 131

Query: 145 KSHRSSSLLSGGESQRAAIARSLCMQPKIMLFDEPTSALDPEMVKEVLDIMIELAEEGMT 204
              R+   LSGGE QR AIA +L        FDEP+S LD +       ++ ELAE+   
Sbjct: 132 VLDRNIDQLSGGELQRVAIAAALARDADFYFFDEPSSYLDIKQRLNAARLIRELAEDDNY 191

Query: 205 MVCVTHEMGFARQVADRV 222
           ++ V H++     ++D +
Sbjct: 192 VLVVEHDLAVLDYLSDYI 209