>gnl|CDD|73029 cd03270, ABC_UvrA_I, The excision repair protein UvrA domain I; Nucleotide excision repair in eubacteria is a process that repairs DNA damage by the removal of a 12-13-mer oligonucleotide containing the lesion. Recognition and cleavage of the damaged DNA is a multistep ATP-dependent reaction that requires the UvrA, UvrB, and UvrC proteins. Both UvrA and UvrB are ATPases, with UvrA having two ATP binding sites, which have the characteristic signature of the family of ABC proteins, and UvrB having one ATP binding site that is structurally related to that of helicases.. Length = 226

Score = 62.9 bits (153), Expect = 8e-11 Identities = 51/226 (22%), Positives = 92/226 (40%), Gaps = 48/226 (21%) Query: 31 HALRDINLNVLRGERVIIAGPSGSGKSTLI----------RCINHIEKHQAGEIIINGIP 80 H L+++++++ R + V+I G SGSGKS+L R + + + + P Sbjct: 9 HNLKNVDVDIPRNKLVVITGVSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLGQMDKP 68 Query: 81 LNDDIRNI------------HEVRRDVGMVFQHFN----LFSNLSVLENCTLGPIWVRKM 124 D I + R VG V + ++ LF+ + + E Sbjct: 69 DVDSIEGLSPAIAIDQKTTSRNPRSTVGTVTEIYDYLRLLFARVGIRERLGF-------- 120 Query: 125 PKKDAEELAMHYLNKVKIADKSHRSSSLLSGGESQRAAIARSLCMQPK--IMLFDEPTSA 182 ++ + YL RS+ LSGGE+QR +A + + + DEP+ Sbjct: 121 ----LVDVGLGYLT-------LSRSAPTLSGGEAQRIRLATQIGSGLTGVLYVLDEPSIG 169 Query: 183 LDPEMVKEVLDIMIELAEEGMTMVCVTHEMGFARQVADRVVFMDQG 228 L P +++ + L + G T++ V H+ R AD V+ + G Sbjct: 170 LHPRDNDRLIETLKRLRDLGNTVLVVEHDEDTIRA-ADHVIDIGPG 214

RPSBLAST alignment for GI: 254780173 and conserved domain: cd03270